BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780753|ref|YP_003065166.1| peptide chain release factor 2
[Candidatus Liberibacter asiaticus str. psy62]
         (355 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 355

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/355 (100%), Positives = 355/355 (100%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK
Sbjct: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE
Sbjct: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW
Sbjct: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG
Sbjct: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE
Sbjct: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK
Sbjct: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355


>gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 354

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 296/349 (84%), Positives = 329/349 (94%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NCLGGLFDWDNA++RL FLN K E+P+LW+ V EAK+LMRERQHLDNA+S +K +QDRL
Sbjct: 1   MNCLGGLFDWDNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            DN+ LL+LA+EE++ S+LQE+ DNL+++KL+ EYKQFESL SGEADSND YLEVHAGAG
Sbjct: 61  DDNIALLDLAVEENNSSVLQESLDNLKQLKLDTEYKQFESLFSGEADSNDVYLEVHAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWANML+RMY RW+E+RKFK + LE+HDGEEAGIKSATLLIKGPNAYGWLK EQG
Sbjct: 121 GTESQDWANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISPYDSNSRRHTSFSS+WVYPVVD+SIEIEI+ESDCRIDTYRASGAGGQHVNTT
Sbjct: 181 VHRLVRISPYDSNSRRHTSFSSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY+LELQKREEIANIGESSKTEI
Sbjct: 241 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           GWGRQIRSYVLQPYQMVKDLRTNIEK+SP DVL+GDLDDFMKA LA+KK
Sbjct: 301 GWGRQIRSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALALKK 349


>gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 376

 Score =  511 bits (1317), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/339 (71%), Positives = 293/339 (86%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A++RL +LN K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+
Sbjct: 23  LDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE D S+++E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDW
Sbjct: 83  ELGEEEGDQSVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           ANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRI
Sbjct: 143 ANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 203 SPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +SKTEIGWG QIR
Sbjct: 263 HIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT +  ++P DVLDGDL++FM+A LA
Sbjct: 323 SYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALA 361


>gi|319783261|ref|YP_004142737.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 376

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 232/339 (68%), Positives = 284/339 (83%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FDWD A++RL +LN + ED  LW   +EA+ LMRERQ L+  I+ +K +   L DN+ L+
Sbjct: 23  FDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKGLTQALEDNIGLI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE D  ++ E    ++ ++ E + +Q E+LLSGEADSND YLE+HAGAGGTESQDW
Sbjct: 83  ELGEEERDEGVIAEAEAAIRSMQGEAKARQVETLLSGEADSNDTYLEIHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLRMYTRWAE+R+FK E LE+HDGEEAGIKSATL+IKG NAYGW+K E GVHRLVRI
Sbjct: 143 ASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWMKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDSN+RRHTSF+S+WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRIT
Sbjct: 203 SPYDSNARRHTSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+ TG+ V CQ ERSQHKNKA+AW MLR++LYE EL+KRE +AN  E+SK++IGWG QIR
Sbjct: 263 HLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEASKSDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQ+VKDLRT +E TSPS VLDGDLDDFM+A+L+
Sbjct: 323 SYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLS 361


>gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
          Length = 342

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/327 (72%), Positives = 284/327 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S++
Sbjct: 1   MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +  T+P DVLDGDL++FM+A LA
Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALA 327


>gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771]
          Length = 350

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 237/327 (72%), Positives = 284/327 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S++
Sbjct: 1   MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +  T+P DVLDGDL++FM+A LA
Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALA 327


>gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
 gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
          Length = 342

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 231/327 (70%), Positives = 281/327 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL   E D  I+
Sbjct: 1   MNNKAEDPTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           ++  D L+ ++ E   +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KDAEDALKALRSEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ FK E LEIHDG+EAGIKSAT+L+KG NA+GW+K E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGFKVEVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ
Sbjct: 181 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE+ELQKREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +E T+P +VLDGDL++FM+A LA
Sbjct: 301 LRTGVESTAPGNVLDGDLNEFMEAALA 327


>gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 376

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/339 (70%), Positives = 291/339 (85%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A++RL +LN K EDP+LW +  EA+ LMRERQ LD+ IS +K+++ +L DN+ L+
Sbjct: 23  LDWDQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQLEQQLNDNIELI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE D  +++E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDW
Sbjct: 83  ELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           ANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRI
Sbjct: 143 ANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E DCRIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 203 SPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +SKT+IGWG QIR
Sbjct: 263 HMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQ+VKDLRT +  T+P DVLDG+L++FM+A LA
Sbjct: 323 SYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALA 361


>gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
 gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
          Length = 342

 Score =  501 bits (1290), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 229/327 (70%), Positives = 279/327 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL   E D  I+
Sbjct: 1   MNNKAEDPTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           ++  D L+ ++ E   +Q E++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KDAEDALKALRSEANRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++  FK E LE+HDGEEAGIKSAT+L+KG NA+GWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 DREGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS+WVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ
Sbjct: 181 FSSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE+ELQKRE+ AN   +SKT+IGWG QIRSYVLQPYQ++KD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +E T+P +VLDGDL+ FM+A LA
Sbjct: 301 LRTGVESTAPGNVLDGDLNQFMEAALA 327


>gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 342

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/327 (72%), Positives = 284/327 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S++
Sbjct: 1   MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +SKTEIGWG QIRSYVLQPYQMVKD
Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIRSYVLQPYQMVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +  ++P DVLDGDL++FM+A LA
Sbjct: 301 LRTGVASSAPDDVLDGDLNEFMEAALA 327


>gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
 gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
          Length = 345

 Score =  491 bits (1265), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/330 (70%), Positives = 284/330 (86%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           + +LN K+EDP+LW +  EA+ LMRERQ LD+ IS ++ ++ ++ DN+ L+EL  EE D 
Sbjct: 1   MDWLNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDA 60

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +++E  + L+ +K E   +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYT
Sbjct: 61  DVVREAEEALKALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYT 120

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RR
Sbjct: 121 RWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSFSSIW+YPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQ
Sbjct: 181 HTSFSSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQ 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQQERSQHKN+A+AW+MLRA++YE EL KREE AN   +SKT+IGWG QIRSYVLQPYQ+
Sbjct: 241 CQQERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQL 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           VKDLRT +  T+P DVLDGDL++FM+A LA
Sbjct: 301 VKDLRTGVTSTAPDDVLDGDLNEFMEAALA 330


>gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4]
 gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4]
          Length = 344

 Score =  491 bits (1265), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 230/330 (69%), Positives = 281/330 (85%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           + +LN K EDP+LW +  EA+ LMRERQ L+++I+ ++ ++ ++ DN+ L+E+  EE D 
Sbjct: 1   MDWLNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDE 60

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           SI++E  D L+ +K E    Q E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYT
Sbjct: 61  SIVKEAEDGLKALKAESGKLQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYT 120

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAE+  FK E LE+HDGEEAGIKSAT+L+KG NAYGW+K E GVHRLVRISPYDSN+RR
Sbjct: 121 RWAERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSFSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIP+G+ V 
Sbjct: 181 HTSFSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIAVS 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQQERSQHKNKA+AW+MLRA+LYE+EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+
Sbjct: 241 CQQERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQL 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           VKDLRT +E T+P DVL+GD+  FM+A LA
Sbjct: 301 VKDLRTGVESTAPDDVLNGDISPFMEAALA 330


>gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234]
 gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii
           NGR234]
          Length = 342

 Score =  488 bits (1256), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/327 (70%), Positives = 280/327 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD++I+ ++  + +L DN+ L+EL  EE D +I+
Sbjct: 1   MNNKAEDPTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L++++ E   KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMY+RWA
Sbjct: 61  TEAEEALRQLRNEASKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +E TSP DVLDG+L++FM+A LA
Sbjct: 301 LRTGVESTSPGDVLDGELNEFMEAALA 327


>gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060]
 gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 375

 Score =  488 bits (1256), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 228/339 (67%), Positives = 275/339 (81%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A +RL+ LN ++EDP LW +   A+ +MRER  L+ A+S I+ ++  L D   L+
Sbjct: 23  LDWDTADKRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRRLEQGLEDAATLI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D + ++E  + ++ ++ E   +Q E+LL+GEAD ND YLEVHAGAGGTESQDW
Sbjct: 83  ELGEMEGDEASIREGEEQIRAVQAEAARRQIETLLAGEADGNDTYLEVHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           ANML RMY RWAE+RK+K E +E  +GEEAGIK ATLLIKG NAYGWLK E GVHRLVRI
Sbjct: 143 ANMLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWLKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDSN+RRHTSF+S+WVYPV+DD I IE+ ESDCRIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 203 SPYDSNARRHTSFASVWVYPVIDDRITIEVKESDCRIDTYRSSGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE AN   +SKT+IGWG QIR
Sbjct: 263 HIPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAEAASKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQ+VKDLRT  + TSP DVLDG++D F++A+LA
Sbjct: 323 SYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLA 361


>gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5]
          Length = 320

 Score =  482 bits (1240), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/307 (73%), Positives = 270/307 (87%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S+++E  D L+ +K E   +Q E
Sbjct: 1   MRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI
Sbjct: 61  AMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E
Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL++
Sbjct: 241 EAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
 gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
          Length = 342

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/327 (70%), Positives = 279/327 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD+ IS ++  + +L DN+ L+EL  EE D +I+
Sbjct: 1   MNNKAEDPSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L++++ +   KQ E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  SEAEEALRQLRNDAAKKQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVD+SI+++I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ
Sbjct: 181 FSSIWVYPVVDESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE EL+KREE AN   +SKTEIGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +E TSP DVLDG+L +FM+A LA
Sbjct: 301 LRTGVESTSPGDVLDGELSEFMEAALA 327


>gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915]
 gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915]
          Length = 375

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 221/351 (62%), Positives = 285/351 (81%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + ++ L    DWD AV+RL +LN + EDP LW +  EA+ LMRERQ L+++I+ I  
Sbjct: 11  EIQQAISLLRRHLDWDQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINH 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q + LLSGEAD+ND YLEV
Sbjct: 71  LKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGIKSAT+L+KG N+YG L
Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGML 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE  +   +
Sbjct: 251 HVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  FM+A LA
Sbjct: 311 TKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALA 361


>gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021]
 gi|307315054|ref|ZP_07594639.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
 gi|307317885|ref|ZP_07597323.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein
           [Sinorhizobium meliloti 1021]
 gi|306896647|gb|EFN27395.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|306898893|gb|EFN29543.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
          Length = 342

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/327 (70%), Positives = 280/327 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD+ I+ ++  + +L DN+ L+EL  EE D +I+
Sbjct: 1   MNNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L++++ E   KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  AEAEEALRQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVD+SI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ
Sbjct: 181 FSSIWVYPVVDESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +E +SP DVLDG+L++FM+A LA
Sbjct: 301 LRTGVESSSPGDVLDGELNEFMEAALA 327


>gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
 gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
          Length = 342

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/327 (71%), Positives = 280/327 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +++++ +L DN+ L+EL  EE D  ++
Sbjct: 1   MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKDNVELIELGEEEGDGGVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDALKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQ
Sbjct: 181 FSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW MLRA++YE EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +  T+P DVLDGDL++FM+A LA
Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALA 327


>gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
 gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
          Length = 321

 Score =  478 bits (1231), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/307 (73%), Positives = 262/307 (85%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ +K  + +L DNL L+E+  EE D  I++E    L+ ++ +V  +Q E
Sbjct: 1   MRERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTKQQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+   K E LEIHDGEEAGI
Sbjct: 61  SLLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSFSSIW YPV+DDSI+++I+E
Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVIDDSIDVDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+CRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 SECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARIY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKTEIGWG QIRSYVLQPYQ+VKDLRT  E TSP DVLDG LD 
Sbjct: 241 EAELKKREEAANDEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGTESTSPQDVLDGKLDP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099]
 gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099]
          Length = 340

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/324 (69%), Positives = 272/324 (83%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  LW   +EA+ LMRERQ L+  I+ +K +   L DN+ L+EL  EE D  ++ E 
Sbjct: 2   RAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEA 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              ++ ++ E + +Q E+LLSGEAD+ND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+R
Sbjct: 62  EAAIRSMQGEAKARQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERR 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           +FK E LE+HDGEEAGIKSATL+IKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S
Sbjct: 122 RFKVEVLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERS
Sbjct: 182 VWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+A+AW MLR++LYE EL+KRE IAN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT
Sbjct: 242 QHKNRAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWGHQIRSYVLQPYQLVKDLRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E TSPS VLDGDLDDFM+A+L+
Sbjct: 302 GVESTSPSSVLDGDLDDFMEASLS 325


>gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Mesorhizobium sp. BNC1]
 gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp.
           BNC1]
          Length = 322

 Score =  471 bits (1211), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/307 (71%), Positives = 259/307 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+  I+ I  +   L DN+ L++L  EE D  I++E    ++ ++ E+  +Q E
Sbjct: 1   MRERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISARQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+ND YLEVHAGAGGTESQDWA MLLRMYTRWAE+R  K E LE+HDGEEAGI
Sbjct: 61  TLLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+ G NAYGWLK E GVHRLVRISP+DSN+RRHTSF+SIWVYPV+DDSIEIEI E
Sbjct: 121 KSATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVIDDSIEIEIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+ RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQERSQHKN+A+AW MLRA+LY
Sbjct: 181 SEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E  SP DVLDGDLD+
Sbjct: 241 ELELKKREEAANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESPSPQDVLDGDLDE 300

Query: 346 FMKATLA 352
           FMKA+L+
Sbjct: 301 FMKASLS 307


>gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
 gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
          Length = 376

 Score =  468 bits (1204), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/351 (64%), Positives = 282/351 (80%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD +++RL +LN K EDP LW N  +A+ +MRERQ L+++I+ I+ 
Sbjct: 11  EIQQALQLLRRHLDWDQSLKRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIEL 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +L +++ L+ +  EE D  ++ +  + ++ +K E++ +Q + LLSGEADSND YLE+
Sbjct: 71  FTQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDILLSGEADSNDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA MLLRMY RW E+ K K E LEI+DGEEAGIKSAT+LIKG NAYG +
Sbjct: 131 HAGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMI 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I++++SESD RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDNIKVDVSESDVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE  N  E+
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+GDLD F++A LA
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALA 361


>gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
 gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
          Length = 375

 Score =  468 bits (1204), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/351 (64%), Positives = 282/351 (80%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L G  DWD +++RL +LN K EDP LW +  +A+ +MRERQ LD++I+ +  
Sbjct: 11  EIQKAIQLLRGHLDWDQSLKRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L + + L+ +  EE D  I+ +  ++++ +K E++ +Q + LLSGEAD ND YLEV
Sbjct: 71  FTKTLEECIELIAMGEEESDVEIIADAENSIRNLKNEIDKRQIDVLLSGEADPNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGIKSAT+L+KG NAYG L
Sbjct: 131 HAGAGGTESQDWASMLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGML 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE+D RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSEADVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE  N  ES
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAES 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+G+LD F++A LA
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALA 361


>gi|260460705|ref|ZP_05808955.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
 gi|259033282|gb|EEW34543.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
          Length = 322

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/307 (71%), Positives = 262/307 (85%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+  I+ +K +   L DN+ L+EL  EE D  ++ E    L+ ++ E + +Q E
Sbjct: 1   MRERQGLEEGIASVKGLTQALEDNIGLIELGEEEGDEGVIAEAEAALRSMQGEAKARQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGI
Sbjct: 61  TLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SE
Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERSQHKNKA+AW MLR++LY
Sbjct: 181 SDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE +AN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDD
Sbjct: 241 EEELKKREAVANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDD 300

Query: 346 FMKATLA 352
           FM+A+L+
Sbjct: 301 FMEASLS 307


>gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2]
 gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 376

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/339 (63%), Positives = 263/339 (77%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D   A +RL+ LN K EDP+LW +   A+ +MRER  L++ +  +      L D + L+
Sbjct: 23  LDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLARFDSELDDAVTLV 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  E+D +  +E    L+ +KLE E +Q E+LLSGE D ND Y+EVH+GAGGTES DW
Sbjct: 83  ELAEAEEDTATEKEAIGQLKSLKLEAERRQIEALLSGEVDGNDTYIEVHSGAGGTESCDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY RWAE+ KFK E +E   G+EAG+KS TLL+KG NA+GW K E GVHRLVRI
Sbjct: 143 ARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWAKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSF+S+WVYPV+DD I+I++ ESDCRIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 203 SPFDSNARRHTSFASVWVYPVIDDKIDIDVKESDCRIDTYRSSGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE E++KRE  AN  E+SKTEIGWG QIR
Sbjct: 263 HIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATEASKTEIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQ+VKDLR+ +   +P DVLDGDLD FM+A LA
Sbjct: 323 SYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALA 361


>gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 376

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/351 (64%), Positives = 277/351 (78%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L+ L    DWD A  RL+ LN   EDP LW N   A+ L+RERQHLD A++   +
Sbjct: 11  EIKQSLSLLRRYLDWDKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D + L+EL  EE D  +++E   +L  ++ EV+ ++ E+LLSGEAD ND +LEV
Sbjct: 71  LAARLDDAVGLIELGEEESDEEVVKEAEASLAVLQTEVQKREVEALLSGEADGNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDW  MLLRMY RWAE++ +K E +E   GEEAG+KSAT+ +KG NA+GWL
Sbjct: 131 HAGAGGTESQDWTEMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I+I ++ESDCRIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDTIDIAVNESDCRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VVQCQ ERSQHKN+A AWNML+A+LYE EL+KRE+ A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SKT+IGWG QIRSYVLQPYQMVKDLRT I  T+P  VLDGDL  F++A LA
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALA 361


>gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
 gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
          Length = 321

 Score =  461 bits (1187), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/307 (71%), Positives = 252/307 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D + + E    ++ ++ E   +Q E
Sbjct: 1   MRERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLA 352
           FM+A+LA
Sbjct: 301 FMEASLA 307


>gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
 gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
          Length = 321

 Score =  461 bits (1187), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/307 (71%), Positives = 253/307 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D + + E  + ++ ++ E   +Q E
Sbjct: 1   MRERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAIKAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLA 352
           FM+A+LA
Sbjct: 301 FMEASLA 307


>gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
 gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
          Length = 322

 Score =  461 bits (1186), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/307 (70%), Positives = 259/307 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++I+ +++++  L DN  L+E+   EDD S++ E    L+ +  +V   Q +
Sbjct: 1   MRERQQLDDSINGVRKLEQDLVDNQELIEMGEMEDDQSVVDEAEGALKAMLEQVNKLQLQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND Y+E+++GAGGTESQDWA+MLLRMY RW E+  +K E +E +DGEEAGI
Sbjct: 61  SLLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGW+K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DDSI IEI+E
Sbjct: 121 KSATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYPVIDDSINIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 181 ADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+REE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E T+PSDVLDGDLD 
Sbjct: 241 EAELQRREEQANKDAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPSDVLDGDLDK 300

Query: 346 FMKATLA 352
           FM+ATLA
Sbjct: 301 FMEATLA 307


>gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 376

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/352 (62%), Positives = 269/352 (76%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D D + +RL  LN K E+P LW +   A+ +MRER  L+  +  IK+ 
Sbjct: 12  IKQSLGLLRRHLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L+ELA  E D +  +E  D L+ +K+E E +Q E+LLSGE DSND Y+EVH
Sbjct: 72  EGDLDDAATLIELAEAEGDEASEKEGIDLLKGLKIEAERRQIEALLSGEVDSNDTYIEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA ML RMY RWAE+ +FK E +E   G+EAGIKSATLL+KG NA+GW K
Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD IEI++ ESDCRIDTYR+SGAGGQH
Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIEIDVKESDCRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE EL++RE  AN  E++
Sbjct: 252 INTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEAT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KTEIGWG QIRSYVLQPYQ+VKDLRT     +P +VLDGDLD FM+A LA K
Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQK 363


>gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
 gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
          Length = 322

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/307 (72%), Positives = 259/307 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K ++  L DN+ L+EL   EDD S++++  + L+ +K +V   Q +
Sbjct: 1   MRERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLD 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR +K E LE HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEI+++E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIDVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT ++ TSP DVLDG LD 
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDS 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [polymorphum gilvum SL003B-26A1]
 gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
          Length = 323

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 224/307 (72%), Positives = 256/307 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD  I+ ++ ++  L DN+ L+EL   E D S++ E  + L+ +K EV   Q  
Sbjct: 1   MRERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLKLQMA 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE++AGAGGTESQDWA+MLLRMY RWAEKR +K E LE+HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSF+S WVYPVVDDSIEI+I+E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVVDDSIEIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+A AW ML+A++Y
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKREE A+   +SKT IGWG QIRSYVLQPYQMVKDLRT +E +SP DVL+GDLD 
Sbjct: 241 EAELQKREEAASAEAASKTSIGWGHQIRSYVLQPYQMVKDLRTGVESSSPDDVLNGDLDP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
 gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
          Length = 322

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/307 (72%), Positives = 258/307 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K ++  L DN+ L+EL   E D S++++  D L+ +K +V   Q +
Sbjct: 1   MRERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNELQLQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR FK E LE HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGW+K E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEIE++E
Sbjct: 121 KSATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIEVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   + KT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDG LD 
Sbjct: 241 EQELKKREEAANAEAAGKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGALDP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17]
 gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17]
          Length = 375

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/346 (62%), Positives = 271/346 (78%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L    DWD A++RL  LN + ED  LW +  +A+ +MRER+ LD AI+  + I++ L
Sbjct: 16  LALLRRFLDWDRALRRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAITATRAIENEL 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
              + L+ELA  E D  + +E   +L  +    E  + ++LL+GEAD+ND+Y+E++AGAG
Sbjct: 76  SGTVELIELAEMEGDEELEKEAVTSLGDLAKRAEADKVKALLAGEADANDSYIEINAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML RMYTRWAE+R  K E ++ H GE+AGIKSATLL+KG NAYG+ K E G
Sbjct: 136 GTESQDWAGMLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGENAYGYAKVESG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISPYDS +RRHTSFSS+WVYPV+DD+IE+EI+ES+ RIDTYRASGAGGQH+NTT
Sbjct: 196 VHRLVRISPYDSAARRHTSFSSVWVYPVIDDNIEVEINESELRIDTYRASGAGGQHINTT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VVQCQ +RSQHKNKA+A+N LRA+LYE EL +RE +AN   ++KT+I
Sbjct: 256 DSAVRITHLPTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAVANAENATKTDI 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDLD FM A L+
Sbjct: 316 GWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALS 361


>gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C]
          Length = 333

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 216/318 (67%), Positives = 263/318 (82%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW +  +A+ +MRERQ+L+++++  +     L + + L+ +  EE+D  I+ E  + +++
Sbjct: 2   LWNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ KQ  +LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E 
Sbjct: 62  LKSEIDKKQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VD++IEI++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI T +VVQCQ ERSQHKNKA
Sbjct: 182 VDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQHKNKA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEATNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301

Query: 335 PSDVLDGDLDDFMKATLA 352
           P  VL+GDLD F++A LA
Sbjct: 302 PQTVLNGDLDTFIEAALA 319


>gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42]
 gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42]
          Length = 322

 Score =  455 bits (1170), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/307 (73%), Positives = 267/307 (86%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ ++ +++++ +L DN+ L+EL  EE D  I++E  D L+ +K E   +Q E
Sbjct: 1   MRERQQLDDGVNGVRQLEQQLKDNVELVELGEEEGDEGIVKEAEDALKALKAEAARRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI
Sbjct: 61  AMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI I+I+E
Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQERSQHKN+A+AW MLRA++Y
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL++
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|319404230|emb|CBI77823.1| peptide chain release factor RF-2 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 317

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/308 (69%), Positives = 257/308 (83%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ+L+++++  +     L + + L+ +  EE+D  I+ E  + ++++K E++ KQ 
Sbjct: 1   MMRERQNLEDSMNSTQLFTQMLEECIELIAMGEEENDVEIITEAENTIRQLKSEIDKKQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E+LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K K E LE HDGEEAG
Sbjct: 61  ETLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILETHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPVVD++IE+++S
Sbjct: 121 IKSATILVKGYNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVVDENIEVDLS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKNKA AW+MLRA+L
Sbjct: 181 ESDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNKATAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KREE  N  E+ KTEIGWG QIRSYVLQPYQ+VKDLRT +E   P  VL+GDLD
Sbjct: 241 YEEELKKREEATNAVEAFKTEIGWGHQIRSYVLQPYQLVKDLRTGVENADPQTVLNGDLD 300

Query: 345 DFMKATLA 352
            F++A LA
Sbjct: 301 TFIEAALA 308


>gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
 gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
          Length = 321

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/307 (69%), Positives = 254/307 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+R  L+ A++ I+ ++  L D   L+EL   E D + ++E  + ++ ++ E   +Q E
Sbjct: 1   MRDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GEAD ND YLEVHAGAGGTESQDWANML RMY RWAE+RK+K + +E  +GEEAGI
Sbjct: 61  TLLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD I IE+ E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRITIEVKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + TSP DVLDGD+D 
Sbjct: 241 ELELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTSPDDVLDGDIDP 300

Query: 346 FMKATLA 352
           F++A+LA
Sbjct: 301 FIEASLA 307


>gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 371

 Score =  451 bits (1161), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/341 (63%), Positives = 261/341 (76%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            +WD A+ RL  LN   E+P LW +   A+ +MRER  LD+AI   + ++  L D + L+
Sbjct: 23  LNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGCRALERELADLIELI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D +++ +  + ++ +K      + E+LLSGEAD ND Y+E++AGAGGTESQDW
Sbjct: 83  ELGEMEGDQTVIDDAEEQIRAVKERAAKMELETLLSGEADHNDCYMEINAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWAEK  +K E LE   GE+AGIKSAT+ I G NAYGWLK E GVHRLVRI
Sbjct: 143 AEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYGWLKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDS +RRHTSFSS WVYPV+DDSI+I+I+ES+CRIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 203 SPYDSAARRHTSFSSAWVYPVIDDSIDIQINESECRIDTYRASGAGGQHINKTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E  KT+IGWG QIR
Sbjct: 263 HIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363


>gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256]
 gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis
           alaskensis RB2256]
          Length = 375

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/353 (62%), Positives = 265/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++  L  L    DWD AV+RL  LN K EDP LW N   A+ +MRER+ LD AI+  + 
Sbjct: 11  KITAALALLRRFLDWDRAVRRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D   L+ELA  E D +++ E   +L  +    E  + ++LL+GEAD NDAY+EV
Sbjct: 71  IERECADTAELIELAEMEGDEAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAYIEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAEKR  K E +E   GE+AGIKSAT+L+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI+E D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINEGDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV  Q +RSQHKN+A A  ML+A+LYE ELQKRE  A+    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALSQK 363


>gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 321

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/307 (71%), Positives = 250/307 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD AI  +  +   L DN+ L+ +  EE D  I++E    ++ IK E + +Q E
Sbjct: 1   MRERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADKRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND Y+EVH+GAGGTESQDWA ML RMY RWAE+ KFK E LE H GEEAGI
Sbjct: 61  TLLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGW+K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDDSI+I+++E
Sbjct: 121 KSATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDSIDIDVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITH+ TG+VVQCQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL++RE  AN   +SKT+IGWG QIRSYVLQPYQMVKDLRT IE TSP DVLDG LD 
Sbjct: 241 EAELERRENAANAEAASKTDIGWGHQIRSYVLQPYQMVKDLRTGIESTSPQDVLDGGLDP 300

Query: 346 FMKATLA 352
           FM+  LA
Sbjct: 301 FMEGALA 307


>gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1]
 gi|123541518|sp|Q2W3F8|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1]
          Length = 371

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/341 (62%), Positives = 260/341 (76%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            +WD A+ RL  LN   E+P LW +   A+ +MRER  LD+AI   + ++  L D   L+
Sbjct: 23  LNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGCRALERELADLAELI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D +++ +  + ++ +K      + E+LLSGEAD ND Y+E++AGAGGTESQDW
Sbjct: 83  ELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYMEINAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWAEK  +K E LE   GE+AGIKSAT+ I G NAYGWLK E GVHRLVRI
Sbjct: 143 AEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYGWLKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDS +RRHTSFSS WVYPV+DD+I+I+I+ES+CRIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 203 SPYDSAARRHTSFSSAWVYPVIDDTIDIQINESECRIDTYRASGAGGQHINKTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E  KT+IGWG QIR
Sbjct: 263 HIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363


>gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
 gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
          Length = 321

 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/307 (69%), Positives = 252/307 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQHL+  I+ I+E++  + +N+ L+ +  EE D  I+ E    L+ ++ +   +Q E
Sbjct: 1   MRERQHLETNITAIRELESAVEENVELIAMGEEEGDGEIVSEAEATLKTLQTDAAKRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND Y+EVH+GAGGTESQDWA+ML RMY RWAE+  FK E LE   GEEAGI
Sbjct: 61  TLLSGEADSNDTYMEVHSGAGGTESQDWASMLQRMYIRWAERANFKVEVLEEQGGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TLLIKG NAYGW K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDD+I+IE++E
Sbjct: 121 KSTTLLIKGHNAYGWAKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDTIDIEVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VV CQQERSQHKN+A AWNML+A+LY
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVACQQERSQHKNRATAWNMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE  AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT IE TSP DVLDG+LD+
Sbjct: 241 EAELEKREAEANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGIESTSPQDVLDGELDE 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
 gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
          Length = 322

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/307 (73%), Positives = 261/307 (85%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++IS IK ++  L DN+ L+EL   EDD S++ +  + L+ +K +V   Q  
Sbjct: 1   MRERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEALRGLKGKVNQLQLN 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLE+++GAGGTESQDWA+MLLRMY RWAEK  FK E LE HDGEEAGI
Sbjct: 61  SLLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSI+I+I+E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIDIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE A+   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDGDLD+
Sbjct: 241 EAELKKREEAASAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGDLDE 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
 gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
          Length = 321

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 218/307 (71%), Positives = 253/307 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D S ++E    +  ++ E   +Q E
Sbjct: 1   MRERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAAILAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RK+K E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVIDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN   ++KT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 ELELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLA 352
           FM+A+LA
Sbjct: 301 FMEASLA 307


>gi|49474202|ref|YP_032244.1| peptide chain release factor 2 [Bartonella quintana str. Toulouse]
 gi|49239706|emb|CAF26082.1| Peptide chain release factor 2 (rf-2 [Bartonella quintana str.
           Toulouse]
          Length = 322

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/308 (68%), Positives = 253/308 (82%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ LD++IS I+     L + + L+ +  EE D  I+ +  + ++ +K E++ +Q 
Sbjct: 1   MMRERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIITDAENLIRNLKNEIDKRQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + LLS EAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG
Sbjct: 61  DMLLSREADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ +KG NAYG LK E GVHRLVRISPYDSN++RHTSF+SIWVYPV+DD+IE+++S
Sbjct: 121 IKSATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYPVIDDNIEVDVS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD RIDTYR+SGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 ESDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KREE  N  ESSKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD
Sbjct: 241 YEQELKKREEKTNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLD 300

Query: 345 DFMKATLA 352
            F++A LA
Sbjct: 301 AFIEAALA 308


>gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 372

 Score =  445 bits (1144), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/339 (62%), Positives = 263/339 (77%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            +WD+A+ RL  LN + EDP+LW +  +A+ LMRER  LD  +S  ++++  L D L L+
Sbjct: 23  LNWDDALMRLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGCRKLEADLDDMLGLI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  E D  +  +    L+ +K      + E+LLSGEAD+ND YLE+++GAGGTE+QDW
Sbjct: 83  ELADAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYLEINSGAGGTEAQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY+RWAE+  +K E +E   GE AGIKSAT+ + G NAYGWLK E GVHRLVRI
Sbjct: 143 AEMLLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYGWLKTEAGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RR TSF+S WVYPVVDD+I+I+I+ESDCRIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 203 SPFDSNARRQTSFASAWVYPVVDDTIDIQINESDCRIDTYRASGAGGQHINKTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E +KT+IGWG QIR
Sbjct: 263 HIPTGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDTKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQM+KDLRTN+E +    VLDGDLD FM A+LA
Sbjct: 323 SYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLA 361


>gi|153009595|ref|YP_001370810.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
 gi|151561483|gb|ABS14981.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
          Length = 321

 Score =  445 bits (1144), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 202/307 (65%), Positives = 258/307 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EEDD SI+Q+  + ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSIELIAMGEEEDDKSIIQDAENTIRELKQEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E
Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE   +   ++KTEIGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREAATDAANATKTEIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58]
 gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58]
          Length = 377

 Score =  444 bits (1143), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/353 (59%), Positives = 263/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  L    DWD A++RL  LN + EDP LW N  +A+ +MRER  LD+AI   + 
Sbjct: 13  RIDAALALLRQSLDWDRALRRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRA 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D   L+E+A  E D  ++ E    L+ +    +  + ++LL+GEADS D YLE+
Sbjct: 73  IEAEKSDTAELIEMAEAEGDEGMVDEAVAALKALADRADEDKIKALLAGEADSYDTYLEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L+KG NAYG+ 
Sbjct: 133 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYA 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IE+ ESD +IDTYRASGAGGQ
Sbjct: 193 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEVKESDLKIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 253 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQ 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 313 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 365


>gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
 gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
          Length = 375

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/353 (59%), Positives = 265/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L+ L    DWD A++RL  LN + EDP LW N  +A+ +MRER  LD AI   + 
Sbjct: 11  RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I     D   L+E+A  E D  ++ E   +L+ +    +  + ++LL+GEAD++D YLE+
Sbjct: 71  IDSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363


>gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
 gi|238690157|sp|B4RCR3|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
          Length = 369

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/349 (60%), Positives = 257/349 (73%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S + NC GG+FDW+ A+++L  LN + EDP LW +  EA+ + RER  L   +  +  ++
Sbjct: 10  SSRSNCSGGVFDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLE 69

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D L   ELA EE D + L E    L+ IK      + E+LLSGEAD NDAY+E+++
Sbjct: 70  RDLADALGYAELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINS 129

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA MLLRMYTRWA+      + +E   GE+AGIKS TL +KG NAYGWLK 
Sbjct: 130 GAGGTESNDWAGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKT 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD+IEIEI+ +D R DTYRASGAGGQHV
Sbjct: 190 EAGVHRLVRISPYDSSARRHTSFASVWVYPVIDDNIEIEINPADVRTDTYRASGAGGQHV 249

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVR+THIPTG+ V CQ +RSQH+N+ QAW MLRA+LYELEL+KRE      E  K
Sbjct: 250 NKTDSAVRLTHIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK 309

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           T+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA
Sbjct: 310 TDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALA 358


>gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3]
          Length = 332

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/318 (67%), Positives = 265/318 (83%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW +  +A+ +MRERQ+L+++++  +    RL + + L+ +  EE+D  I+ ET + +++
Sbjct: 2   LWNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ +Q E LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E 
Sbjct: 62  LKSEIDKRQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSNS+RHTSF+SIWVYPV
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIWVYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VD++IE+++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A
Sbjct: 182 VDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKD RT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDSRTGLENTD 301

Query: 335 PSDVLDGDLDDFMKATLA 352
           P  VL+GDLD F++A LA
Sbjct: 302 PQTVLNGDLDAFIEAALA 319


>gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
 gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
          Length = 376

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/339 (63%), Positives = 267/339 (78%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D +  RL+ LN   EDP+LW +  +A+ LM+ER  L++A++ I +++  L DN+ ++
Sbjct: 23  LDVDQSTVRLAELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTGIGKVERELTDNIDMI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D  I++E  + L+ +K EV  ++ E+LLSGEAD  D YLEVHAGAGGTESQDW
Sbjct: 83  ELGEAEGDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTYLEVHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLRMY RWAEK  FK E LE  DGEEAGIKSAT+ I G NAYGWLK E GVHRLVRI
Sbjct: 143 ASMLLRMYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAYGWLKTEAGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSFSS+ ++PV+DDSI+I+I ESD R DT R+ GAGGQHVN T+SAVR+T
Sbjct: 203 SPFDSNARRHTSFSSVQIFPVIDDSIKIDIKESDVRTDTMRSGGAGGQHVNKTESAVRLT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTGV V CQ  RSQHKN+AQAW+MLRA+LYE+EL+KREE A   +++KTEIGWG QIR
Sbjct: 263 HIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQAAKTEIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT ++ +  + VLDGDLD+FM ATLA
Sbjct: 323 SYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLA 361


>gi|306843816|ref|ZP_07476414.1| peptide chain release factor 2 [Brucella sp. BO1]
 gi|306275894|gb|EFM57610.1| peptide chain release factor 2 [Brucella sp. BO1]
          Length = 321

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 204/307 (66%), Positives = 257/307 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L DN+ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINYLKQTLNDNVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1]
          Length = 323

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/308 (68%), Positives = 255/308 (82%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ L+++I+ I+     L + + L+ +  EE D  I+ +  + ++++K E++ +Q 
Sbjct: 1   MMRERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDKRQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG
Sbjct: 61  DLLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+L+KG NAYG LK E GVHRLVRISP+DSN+RRHTSF+S+WVY VVDD+IEI+IS
Sbjct: 121 IKSATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVYSVVDDNIEIDIS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 ESDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KRE   N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD
Sbjct: 241 YEEELKKREAETNAIEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLD 300

Query: 345 DFMKATLA 352
            F++A LA
Sbjct: 301 AFIEAALA 308


>gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1]
 gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas
           wittichii RW1]
          Length = 375

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/351 (59%), Positives = 266/351 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++ +  +    DWD A++RL  LN + EDP LW +   A+ +MRER+ LD A+S +K 
Sbjct: 11  QINQAMALVRRFLDWDRALRRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D + L+ELA  EDD +++ +    L  +    E  +  +LL+GEAD+N+ Y+EV
Sbjct: 71  IEQERDDTIELIELAEAEDDTALVDDGVQALAALAERAEKDKIGALLAGEADANNTYIEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA ML RMY RWAE+  +K E ++ H GE+AGIKSATLL++G NAYG+ 
Sbjct: 131 NSGAGGTESQDWAGMLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS +RRHTSF+S+WVYP VDD I+IE+ E D +IDTYR+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSAARRHTSFASVWVYPEVDDDIDIEVLEKDLKIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V CQ +RSQHKN+A+A   L+A+LYE ELQKRE  A  G +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KTEIGWG QIRSYVLQPYQMVKDLRT    T+PSDVLDGDLD FM A L+
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALS 361


>gi|17987337|ref|NP_539971.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|62289859|ref|YP_221652.1| peptide chain release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82699784|ref|YP_414358.1| peptide chain release factor 2 [Brucella melitensis biovar Abortus
           2308]
 gi|189024100|ref|YP_001934868.1| peptide chain release factor 2 [Brucella abortus S19]
 gi|225627404|ref|ZP_03785441.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225852429|ref|YP_002732662.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237815350|ref|ZP_04594348.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|254689165|ref|ZP_05152419.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|254693648|ref|ZP_05155476.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|254697300|ref|ZP_05159128.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254706874|ref|ZP_05168702.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|254710017|ref|ZP_05171828.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|254714019|ref|ZP_05175830.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|254716923|ref|ZP_05178734.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|254719019|ref|ZP_05180830.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|254730198|ref|ZP_05188776.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|256031512|ref|ZP_05445126.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|256044588|ref|ZP_05447492.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256061021|ref|ZP_05451178.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|256113462|ref|ZP_05454303.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159637|ref|ZP_05457399.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|256254917|ref|ZP_05460453.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|256257415|ref|ZP_05462951.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|256264074|ref|ZP_05466606.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|260168645|ref|ZP_05755456.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|260545394|ref|ZP_05821135.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260563940|ref|ZP_05834426.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260754664|ref|ZP_05867012.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260757887|ref|ZP_05870235.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260761710|ref|ZP_05874053.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883690|ref|ZP_05895304.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|261213915|ref|ZP_05928196.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|261218729|ref|ZP_05933010.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261222099|ref|ZP_05936380.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|261314339|ref|ZP_05953536.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261317565|ref|ZP_05956762.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261321773|ref|ZP_05960970.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261325021|ref|ZP_05964218.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261758119|ref|ZP_06001828.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|265984009|ref|ZP_06096744.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|265988599|ref|ZP_06101156.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|265991013|ref|ZP_06103570.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994850|ref|ZP_06107407.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998064|ref|ZP_06110621.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|294852271|ref|ZP_06792944.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297248263|ref|ZP_06931981.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306840093|ref|ZP_07472879.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|17983020|gb|AAL52235.1| bacterial peptide chain release factor 2 (rf-2) [Brucella
           melitensis bv. 1 str. 16M]
 gi|62195991|gb|AAX74291.1| peptide release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82615885|emb|CAJ10889.1| Class I peptide chain release factor domain:Peptide chain release
           factor 2:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189019672|gb|ACD72394.1| Peptide chain release factor 2 [Brucella abortus S19]
 gi|225617409|gb|EEH14454.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225640794|gb|ACO00708.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237790187|gb|EEP64397.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|260096801|gb|EEW80676.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260153956|gb|EEW89048.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260668205|gb|EEX55145.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260672142|gb|EEX58963.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674772|gb|EEX61593.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260873218|gb|EEX80287.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|260915522|gb|EEX82383.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|260920683|gb|EEX87336.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|260923818|gb|EEX90386.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261294463|gb|EEX97959.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261296788|gb|EEY00285.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261301001|gb|EEY04498.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261303365|gb|EEY06862.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261738103|gb|EEY26099.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|262552532|gb|EEZ08522.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|262765963|gb|EEZ11752.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001797|gb|EEZ14372.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094278|gb|EEZ18139.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|264660796|gb|EEZ31057.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|264662601|gb|EEZ32862.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|294820860|gb|EFG37859.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297175432|gb|EFH34779.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306404821|gb|EFM61114.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|326408941|gb|ADZ66006.1| Peptide chain release factor 2 [Brucella melitensis M28]
 gi|326538654|gb|ADZ86869.1| peptide chain release factor 2 [Brucella melitensis M5-90]
          Length = 321

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 203/307 (66%), Positives = 257/307 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|161618874|ref|YP_001592761.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|254704223|ref|ZP_05166051.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|260566529|ref|ZP_05836999.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261754891|ref|ZP_05998600.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|161335685|gb|ABX61990.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|260156047|gb|EEW91127.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261744644|gb|EEY32570.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
          Length = 321

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 203/307 (66%), Positives = 257/307 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
 gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
          Length = 315

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/307 (67%), Positives = 247/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER HL+N I+ +  +Q  L DNL L E+A  E D + + +    L  +K      + E
Sbjct: 1   MQERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRAGRAELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+N+A++E+HAGAGGTES DWANML RMY RWA++   K + +E   GEEAGI
Sbjct: 61  ALLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+WVYP +DD+IEIE++E
Sbjct: 121 KSATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEIDDNIEIEVAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCR+DT+RASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQ+REE AN   +SKT+IGWG QIRSYVLQPYQMVKDLRT +E  SP  VLDGDLD 
Sbjct: 241 EMELQRREEEANAQAASKTDIGWGHQIRSYVLQPYQMVKDLRTGVESPSPDAVLDGDLDA 300

Query: 346 FMKATLA 352
           FM A LA
Sbjct: 301 FMGAALA 307


>gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
 gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
          Length = 375

 Score =  441 bits (1135), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/339 (60%), Positives = 261/339 (76%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DW+ A++RL  LN + +DP LW +  EA+ + RE++ L+ A+  ++EI   + D +  +
Sbjct: 23  LDWERALRRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVREIGSEMADAIEFV 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D  +++E   +LQ++    +  + ++LLSGEAD ND Y+E+HAGAGGTESQDW
Sbjct: 83  ELGEAEGDEDVVKEGLASLQKLADRADADKVQALLSGEADGNDTYIEIHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ K E GVHRLVRI
Sbjct: 143 AEMLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYAKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDS++RRHTSFSS+WVYPV+DD+IEIEI++SD +IDTYRASGAGGQHVNTTDSAVRIT
Sbjct: 203 SPYDSSARRHTSFSSVWVYPVIDDNIEIEINDSDLKIDTYRASGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VV  Q +RSQHKN+A A NML+A+L+E E+ +RE  A+     KTEIGWG QIR
Sbjct: 263 HQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQEKTEIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT +  +SP DVLDG LD ++ A LA
Sbjct: 323 SYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALA 361


>gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506]
 gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506]
          Length = 376

 Score =  441 bits (1134), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/339 (62%), Positives = 263/339 (77%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D +  RL+ LN   EDP+LW +   A+ LM+ER  L++ +  I+ I   L DN+ L+
Sbjct: 23  IDFDRSKARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIERINRELADNVELI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D SI+ E +  L R+K EV  +Q E+LLSGEADSND+YLEVHAGAGGT+SQDW
Sbjct: 83  ELGEAEGDDSIVDEAAAALDRLKAEVARRQLEALLSGEADSNDSYLEVHAGAGGTDSQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWAE+R FK E +E   GE AG+KSAT+L+KG NAYGWLK E GVHRLVRI
Sbjct: 143 ALMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWLKTEGGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RR TSF+SI VYPV+DD I ++I E+D R+DT R+ GAGGQHVN T+SAVR+T
Sbjct: 203 SPFDSNARRQTSFASIDVYPVIDDRIVVDIKEADVRVDTMRSGGAGGQHVNKTESAVRLT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V  Q +RSQHKN+A AW+MLRAKLYE+EL+KRE  A   +++KT+IGWG QIR
Sbjct: 263 HIPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQAAKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQ+VKDLRT +   +P +VLDGDLD FM+A LA
Sbjct: 323 SYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALA 361


>gi|163843187|ref|YP_001627591.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
 gi|163673910|gb|ABY38021.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
          Length = 321

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 203/307 (66%), Positives = 256/307 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI++     ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEGAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGQNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|239831796|ref|ZP_04680125.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239824063|gb|EEQ95631.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 321

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/307 (65%), Positives = 257/307 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  +   L D++ L+ +  EE+D SI+Q+  + ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLTQTLNDSIELIAMGEEENDKSIIQDAENTIRELKEEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E
Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE   +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREAATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMEAALA 307


>gi|307294100|ref|ZP_07573944.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
 gi|306880251|gb|EFN11468.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
          Length = 375

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/353 (59%), Positives = 264/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L+ L    DWD A++RL  LN + EDP LW N   A+ +MRER  L+ AI   + 
Sbjct: 11  RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I     D   L+E+A  E D  ++ E   +L+ +    +  + ++LL+GEAD++D YLE+
Sbjct: 71  IDSEKTDTAELIEMADAEGDEDMVTEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363


>gi|254701680|ref|ZP_05163508.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261752232|ref|ZP_05995941.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261741985|gb|EEY29911.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
          Length = 321

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/306 (66%), Positives = 256/306 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATL 351
           FM+A L
Sbjct: 301 FMEAAL 306


>gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000]
 gi|24638156|sp|Q9A752|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790910|sp|B8GWM3|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter
           crescentus NA1000]
          Length = 371

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/345 (61%), Positives = 255/345 (73%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +C GG+FDWD A+++L  LN + EDP LW    EA+ + RER +L   +  ++ I+  L 
Sbjct: 14  DCSGGVFDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLK 73

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L   ELA  E D   L +    L+ +K      + E+LLSGEAD ND Y+E+++GAGG
Sbjct: 74  DALEYAELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGG 133

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TES DWA +LLRMYTRWA      TE +E  DG++AGIKSATLL+KG NAYGWLK E GV
Sbjct: 134 TESCDWAGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGV 193

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ SD R DTYRASGAGGQH+N TD
Sbjct: 194 HRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEINPSDVRTDTYRASGAGGQHINKTD 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQKRE      E  KT+IG
Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIG 313

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA
Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLA 358


>gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354]
          Length = 375

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 258/339 (76%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DW+ A++ L  LN + EDP LW +  +A+ +MRE++ L++AI  +  I   + D +  +
Sbjct: 23  LDWERALRELDELNARVEDPTLWDDPKQAQAIMREQKRLESAIGTVNTISSEMADAIEFV 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+   E D  I+ E   +L+++    +  + ++LLSGEAD+NDAYLEVHAGAGGTESQDW
Sbjct: 83  EMGEAEGDDDIVNEGLTSLEKLAARADADKVQALLSGEADANDAYLEVHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML+RMY RWAEKR FK E +E   GE+AGIKS TL IKG NAYG+ K E GVHRLVRI
Sbjct: 143 AEMLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGENAYGYAKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDS++RRHTSFSS+WVYPV+DD IEIEI+ESD +IDTYRASGAGGQHVNTTDSAVRIT
Sbjct: 203 SPYDSSARRHTSFSSVWVYPVIDDDIEIEINESDLKIDTYRASGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VV  Q +RSQHKN+A A +ML+A+L+E E+ +RE  A+   + KTEIGWG QIR
Sbjct: 263 HQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAAASGEYAEKTEIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQ+VKDLRT    T+P DVLDG +D F+ A LA
Sbjct: 323 SYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALA 361


>gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
 gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
          Length = 333

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/318 (66%), Positives = 262/318 (82%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW N  +A+ +MRERQ+L+N+++  +     L + + L+ +  EE+D  I+ E  + + +
Sbjct: 2   LWNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ ++ E LLSGEADSND YLE+HAGAGG ESQDWA+MLLRMY+RWAE+ K K E 
Sbjct: 62  LKKEIDKRRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSATLLIKG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIW+YPV
Sbjct: 122 LETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWIYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V+++IE+++S++D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A
Sbjct: 182 VNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301

Query: 335 PSDVLDGDLDDFMKATLA 352
           P  VL+GDLD F++A LA
Sbjct: 302 PQTVLNGDLDIFIEAALA 319


>gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
 gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
          Length = 322

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/307 (66%), Positives = 246/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L+  +  I ++   L D L L+EL  E  D    +E  + L+ +  + + +Q E
Sbjct: 1   MRERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDAQRRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGEAD ND ++E+H+GAGGTESQDWA ML RMY RWAE++KFK E +E   GEEAGI
Sbjct: 61  ALFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TLL+KG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD IE+ I+E
Sbjct: 121 KSGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDRIEVNINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSA+RITHIPTG+VV CQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KRE  AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +   +PS+VLDG+LDD
Sbjct: 241 ELELEKREAEANKAAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPSEVLDGELDD 300

Query: 346 FMKATLA 352
           FM+A+LA
Sbjct: 301 FMQASLA 307


>gi|49475632|ref|YP_033673.1| peptide chain release factor 2 [Bartonella henselae str. Houston-1]
 gi|49238439|emb|CAF27667.1| Peptide chain release factor 2 [Bartonella henselae str. Houston-1]
          Length = 322

 Score =  435 bits (1118), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/308 (68%), Positives = 257/308 (83%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ LD++I+ I+     L + + L+ +  EE D  I+ +  ++++ +K E++ +Q 
Sbjct: 1   MMRERQRLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDKRQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ++LLSGEAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG
Sbjct: 61  DALLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSATLL+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++S
Sbjct: 121 IKSATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 EADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRAIAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD
Sbjct: 241 YEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLD 300

Query: 345 DFMKATLA 352
            F++A LA
Sbjct: 301 SFIEAALA 308


>gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 375

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/351 (58%), Positives = 260/351 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DWD AV+RL  L+ + EDP LW +  +A+ +MRER+ LD AI  +K+
Sbjct: 11  RIEGALALIRKFLDWDRAVRRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAIGTVKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D   + E    L  +    +  + ++LL+GEAD+N+A+LEV
Sbjct: 71  IGQEMADAIEFVELGEMEGDEDTVAEGLATLAALAERADADKVQALLAGEADANNAFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMYTRWAE+  +K E ++ H GE AGIK  TLLIKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+I+IEI+ +D ++DTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIDIEINPADLKVDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V  Q +RSQHKN+A A  MLRA+LYE EL KRE  A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KTEIGWG QIRSYVLQPYQ VKDLRT +  T+P++VLDG LD FM A L+
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALS 361


>gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
 gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 206/346 (59%), Positives = 255/346 (73%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++C GG+FDWD A++RL  LN + EDP LW    EA+ + RER  L  +I  ++ ++  L
Sbjct: 1   MDCSGGVFDWDVALRRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKEL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D +   EL   E D S+++E+   L+ +K      + E+LLSGEAD NDAY+E+++GAG
Sbjct: 61  KDAVEFAELGDMEGDESLIEESRAMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA +L+RMYTRWA       E  E   GE+AGIKS TL+IKG NAYGWLK E G
Sbjct: 121 GTESCDWAGILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS++RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSSARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG+ V CQ  RSQH N+ +AW MLRA+LYE ELQKRE      E  KT+I
Sbjct: 241 DSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQKTDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA
Sbjct: 301 GWGHQIRSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLA 346


>gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
 gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
          Length = 322

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/310 (67%), Positives = 246/310 (79%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRER  L+ AI   + ++  L DNL L+E+   E D +I+ E    L+  +      + 
Sbjct: 1   MMRERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAEAEI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E+LLSGEAD+ND Y+E+HAGAGGTESQDWA MLLRMYTRWAE++ +K E +E HDGEEAG
Sbjct: 61  ETLLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+L+KG NA+GWLK E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD I+IE+S
Sbjct: 121 IKSATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDKIDIEVS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 EADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE ELQKRE+ A    S KT+IGWG QIRSYVLQPYQMVKDLRT +E +    VL GDLD
Sbjct: 241 YEAELQKREDAAAAQASGKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTDGVLGGDLD 300

Query: 345 DFMKATLAIK 354
            FM A LA +
Sbjct: 301 PFMAAALAAR 310


>gi|218682869|ref|ZP_03530470.1| peptide chain release factor 2 [Rhizobium etli CIAT 894]
          Length = 267

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 198/248 (79%), Positives = 227/248 (91%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E++LSGEA     YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAG
Sbjct: 5   EAMLSGEARQQRHYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAG 64

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+
Sbjct: 65  IKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEIN 124

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++
Sbjct: 125 ESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARM 184

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL+
Sbjct: 185 YEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLN 244

Query: 345 DFMKATLA 352
           +FM+A LA
Sbjct: 245 EFMEAALA 252


>gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 375

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/351 (58%), Positives = 261/351 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DWD AV+RL  LN + EDP LW +  +A+ +MRER+ L+ +I  + +
Sbjct: 11  RIEAALALVRKFLDWDRAVRRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASIGTVNQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D   + E    L  +    +  + ++LL+GEAD+N+A+LEV
Sbjct: 71  IGQEMADAIEFVELGEMEGDEDTINEGLATLAALAERADNDKVQALLAGEADANNAFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMYTRWAE+  +K E ++ H GE AGIKSATLLIKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+IE+EI+ +D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIEVEINPADLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V  Q +RSQHKN+A A  ML+A++YE EL KRE  A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KTEIGWG QIRSYVLQPYQ VKDLRT +  T+P++VLDG LD FM A L+
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALS 361


>gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
 gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
          Length = 322

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/307 (65%), Positives = 247/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  +++ +  I  ++  L D L L+EL   E+D    +E    L+ +  +   +Q E
Sbjct: 1   MRERTQIEDQLGAIARLERDLDDALTLVELGESENDADTEKEGIAQLEALLKDARERQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGEAD ND Y+EVH+GAGGTES DWA ML RMY RWAE++KFK E +E   G+EAGI
Sbjct: 61  ALFSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSGDEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD I+I+++E
Sbjct: 121 KSATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDKIDIQVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KRE  AN  E+SKT+IGWG QIRSYVLQPYQ+VKDLRT     +PS+VLDG+LDD
Sbjct: 241 EMELKKREAEANAVEASKTDIGWGHQIRSYVLQPYQLVKDLRTGHTSGTPSEVLDGELDD 300

Query: 346 FMKATLA 352
           FM+A+LA
Sbjct: 301 FMQASLA 307


>gi|163868347|ref|YP_001609556.1| peptide chain release factor 2 [Bartonella tribocorum CIP 105476]
 gi|161018003|emb|CAK01561.1| peptide chain release factor RF-2 [Bartonella tribocorum CIP
           105476]
          Length = 321

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/307 (68%), Positives = 255/307 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++I+ +      L + + L+ +  EE D  I+ +  ++++ +K E++ +Q +
Sbjct: 1   MRERQRLDDSINGLLSFTKTLEECIELIAMGEEESDVEIIADAENSIRHLKSEIDKRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGI
Sbjct: 61  VLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE
Sbjct: 121 KSATILVKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  N  ESSKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+G+LD 
Sbjct: 241 EEELKKREEETNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDA 300

Query: 346 FMKATLA 352
           F++A L+
Sbjct: 301 FIEAALS 307


>gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31]
 gi|189039999|sp|B0SXB7|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31]
          Length = 367

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/345 (59%), Positives = 255/345 (73%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +C GG+FDWD A+++L  LN + EDP LW    EA+ + R+R  L   +  ++E++  L 
Sbjct: 14  DCSGGVFDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLK 73

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L   ELA  E D ++L++    L+ +K      + E+LLSGEAD ND Y+E+++GAGG
Sbjct: 74  DALEYAELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGG 133

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TES DWA MLLRMY+RWA   K   E +E   G++ GIKSATLL+KG NAYGWLK E GV
Sbjct: 134 TESCDWAGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGV 193

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISPYD+ ++RHTSF+S WVYPVVDD+IEI+I+ SD R DTYRASGAGGQH+N TD
Sbjct: 194 HRLVRISPYDAAAKRHTSFASAWVYPVVDDTIEIDINPSDVRTDTYRASGAGGQHINKTD 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQ+RE      E  KT+IG
Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIG 313

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA
Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLA 358


>gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 369

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/352 (59%), Positives = 267/352 (75%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S  L  L    +++ AV RL+ L  +T  P  W +   A+ +MRE+  L+  I+ IK++
Sbjct: 12  ISSTLELLRKHVNFEVAVARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D + L+EL + E D  ++ E    L ++  E + +Q ESLLSGEAD+ND +LE+H
Sbjct: 72  QAEMDDCVALIELGIAEGDDDVVAEAEAVLTKLVTEADKRQLESLLSGEADANDCFLEIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML+RMY RW E+R +K   +E   GEEAGIKS T+ I G NAYGWLK
Sbjct: 132 AGAGGTEAQDWAQMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIE+ + D RIDTYRASGAGGQH
Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEVEDKDLRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH+PT +VVQCQ +RSQH+N+A A+NML+A+LYELELQKREE A+   +S
Sbjct: 252 VNKTDSAIRITHLPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAAS 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVL PYQMVKDLRTN+EK +   VLDGDLD F++A+LA +
Sbjct: 312 KTDIGWGNQIRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAAR 363


>gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756]
 gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 373

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/339 (61%), Positives = 250/339 (73%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A+++L  LN + EDP LW    EA+ + RER  L   +  ++ I+  L D +   
Sbjct: 23  LDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERAALAAKVEAVQSIERDLKDAVEYA 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  E D   L +    L+ +K      + E+LLSGEAD NDAY+E+++GAGGTES DW
Sbjct: 83  ELADMEGDEESLNDARVQLKALKDRAGRAELEALLSGEADGNDAYIEINSGAGGTESCDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A +LLRMYTRWA     +TE +E  DG++AGIKSATLL+KGPNAYGWLK E GVHRLVRI
Sbjct: 143 AGILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKGPNAYGWLKTEAGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDS++RRHTSF+S WVYPVVDD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+T
Sbjct: 203 SPYDSSARRHTSFASAWVYPVVDDTIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQKRE      E  KT+IGWG QIR
Sbjct: 263 HIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRTN+E +    VLDGDLD FM A LA
Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALA 361


>gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
 gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
          Length = 316

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/307 (65%), Positives = 240/307 (78%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  LD +++ ++EI   L D L L E+A  E D  + Q+ ++ L+ ++      + +
Sbjct: 1   MRERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGKAELQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD ND+YLE+H GAGGTE+QDWA+ML RMYTRWAEK  FK E +E   GEEAG+
Sbjct: 61  ALLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+L+KG NAYGWLK E GVHRLVRISPYDS+ RRHTSF+S+W YP+VDD+IEIEI +
Sbjct: 121 KSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIED 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQHKN+A AW MLRA+LY
Sbjct: 181 KDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELELQKREE A     SKT+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLDD
Sbjct: 241 ELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDD 300

Query: 346 FMKATLA 352
           FM A LA
Sbjct: 301 FMAAALA 307


>gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1]
 gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 376

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/339 (63%), Positives = 268/339 (79%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D +  RL+ LN   EDP LW +  +A+ LM+ER  L+++++ I +++  L DN+ ++
Sbjct: 23  LDVDQSTVRLAELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTGIGKVERELTDNIEMI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D  I++E  D L+ +K EV  ++ E+LLSGEAD  D YLEVHAGAGGTESQDW
Sbjct: 83  ELGEAEGDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTYLEVHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLRMY RWAEK  FK E LE  +GEEAGIKSAT+ I G NAYGWLK E GVHRLVRI
Sbjct: 143 ASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAYGWLKTEAGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+ESD R+DT R+ GAGGQHVN T+SAVR+T
Sbjct: 203 SPFDSNARRHTSFSSVQIFPVIDNSIKIDIAESDVRVDTMRSGGAGGQHVNKTESAVRLT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTGV V CQ  RSQHKN+AQAW+MLRA+LYE+EL+KREE A   +++KTEIGWG QIR
Sbjct: 263 HIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQAAKTEIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT ++ +  + VLDGDLD+FM ATLA
Sbjct: 323 SYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLA 361


>gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761334|ref|ZP_04759422.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374241|gb|EER63738.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 375

 Score =  427 bits (1099), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/346 (59%), Positives = 264/346 (76%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L    DWD A++RL  LN + EDP LW +   A+ +MRER  LD +I+  + I   L
Sbjct: 16  LALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESIAATRAIATEL 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +N+ L+E+A  E +  ++Q+    L+ +    +  + ++LLSGEAD ND Y+EV+AGAG
Sbjct: 76  QENIELIEMAEAEGEEEMVQDAISALESLAERADRDKVKALLSGEADGNDTYIEVNAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML RMY RWAE++ FK E ++ H GE+AGIKSATLL+KG +AYG+ K E G
Sbjct: 136 GTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGESAYGYAKTENG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN+RRHTSF+S+ VYPVVDD I+IE+ + D +IDTYR+SGAGGQHVNTT
Sbjct: 196 VHRLVRISPFDSNARRHTSFASVAVYPVVDDDIDIEVLDKDLKIDTYRSSGAGGQHVNTT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ +RSQHKN+A+A   L+A+LYE ELQ RE  A+ G ++K+EI
Sbjct: 256 DSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAEASAGYAAKSEI 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVLQPYQ+VKDLRT I  T+P+DVLDG+LD F+ A LA
Sbjct: 316 GWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALA 361


>gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS278]
 gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS278]
          Length = 323

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/307 (65%), Positives = 248/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E+D  ++ E  + L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE   FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  S VL+GDLD+
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1]
 gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium
           sp. BTAi1]
          Length = 323

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/307 (65%), Positives = 247/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E+D  ++ E  + L+ +K +V  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMYTRWAEK  FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
 gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
          Length = 374

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/351 (56%), Positives = 262/351 (74%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++ ++ L    DW+ A  RL  LN  +EDP LW +  +A++LM+ERQ L+  I+ I  
Sbjct: 11  EITQAISLLRRHLDWEKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSING 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L+ELA  EDD  +L E    L+ +  ++  +Q  +LLSGEAD+ND Y EV
Sbjct: 71  LEGDLGDTKDLIELAEMEDDADVLAEAESALRELHADLGKRQAATLLSGEADANDTYFEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTES DWANMLLRMY RWAE   +K E      G+EAGIK+AT+L+KG NAYG++
Sbjct: 131 HSGAGGTESNDWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYGYM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD+IEI + +++ R+DT+R+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSQAKRHTSFSSVWVYPVIDDNIEIIVPDNEIRLDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+A A   L+++LYE E+QKR E       
Sbjct: 251 HVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRANAMKALKSRLYEAEMQKRNEATQAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVLQPYQ+VKDLRT +E T+PS VLDGDL+ FM+A LA
Sbjct: 310 AKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALA 360


>gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
 gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
          Length = 373

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/339 (60%), Positives = 248/339 (73%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A++RL  LN + EDP LW    EA+ +MRER  L   +  +  +   L D L   
Sbjct: 23  LDWDVALRRLDELNARVEDPTLWDKPEEAQSVMRERTKLSGGVDAVNSLTKELQDALDYA 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  E D  +L+E    L+ IK +    + E+LLSGEAD NDAY+E+++GAGGTES DW
Sbjct: 83  ELADMEGDEELLEEARAMLKAIKEKAARAELEALLSGEADGNDAYVEINSGAGGTESCDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A +LLRMYTRWA +        E   GE+AGIKSAT+++KG NAYGWLK E GVHRLVRI
Sbjct: 143 AGILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKGTNAYGWLKTEAGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQHVN TDSAVR+T
Sbjct: 203 SPFDSNARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHVNKTDSAVRLT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQ  RSQH N+ +AW MLRA+LYELELQKRE      E  KT+IGWG QIR
Sbjct: 263 HIPTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKREAAQAALEDQKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT++E +    VLDGDLD FM A+LA
Sbjct: 323 SYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLA 361


>gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
 gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
          Length = 333

 Score =  424 bits (1091), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 196/313 (62%), Positives = 248/313 (79%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ LMRER  L N I  ++ ++  + D L L+ELA  E D +++ E    L+ 
Sbjct: 1   MWNDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRA 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E + ++ ESLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   
Sbjct: 61  LAEEAKRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTM 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E  +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV
Sbjct: 121 MESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDDSIEIEI+E+D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A
Sbjct: 181 VDDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRA 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+A++YE ELQKRE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+
Sbjct: 241 TAMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKTN 300

Query: 335 PSDVLDGDLDDFM 347
           P  +LDGD+DDFM
Sbjct: 301 PDAILDGDIDDFM 313


>gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
 gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
          Length = 376

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 254/339 (74%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A++RL  +N + EDP LW+   EA+ +MRER  L + +  +K+++  + D L L+
Sbjct: 23  LDWDVALRRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKKLEQDVKDALELI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  E D +       +L     E + ++ ESLLSGEAD  D ++EV+AGAGGTE+QDW
Sbjct: 83  ELAEAEGDGATADAAIADLHSFAAEAKRREIESLLSGEADMRDCFVEVNAGAGGTEAQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAEKR +K +  E  +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRI
Sbjct: 143 AQMLLRMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWLKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+ +RR TSF+S++V+PV+DD IEIEI+ +D + DT+RASGAGGQHVN T+S VR T
Sbjct: 203 SPFDAAARRQTSFASVYVFPVIDDKIEIEINPADLKTDTFRASGAGGQHVNKTESGVRFT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+V    Q+RSQH+N+  A  ML+A+LYELEL+KREEI    E+ KT+IGWG QIR
Sbjct: 263 HIPTGIVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEAGKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVL PYQ+VKDLRTN+EK +P  VLDG+LDDFM A LA
Sbjct: 323 SYVLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALA 361


>gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H]
 gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter
           oxydans 621H]
          Length = 322

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/307 (64%), Positives = 245/307 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L N I  ++ I+  +   L L+ELA  E D S++Q+    L+ I  +V  ++ E
Sbjct: 1   MRERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRKREIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEADSND Y+EV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AGI
Sbjct: 61  SLLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEGEQAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEI+I++
Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIDIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT+RASGAGGQHVN TDSA+RITHIPTG+VV CQ +RSQH+N+A+A  MLRA++Y
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKRE  A   E+SKT+IGWG QIRSYVL PYQ+VKDLRT +EK +P  VLDG LDD
Sbjct: 241 EAELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPGAVLDGALDD 300

Query: 346 FMKATLA 352
           FM A+LA
Sbjct: 301 FMSASLA 307


>gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170]
 gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 322

 Score =  421 bits (1082), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/309 (66%), Positives = 238/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER HL+ +++  + ++  + D   L+EL   EDD   + E    L     +   ++ E
Sbjct: 1   MRERTHLEQSVAGYRALEREVDDAATLIELGDAEDDAESIAEGERMLHSAAQKARKQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD NDAYLEVHAGAGGTE+QDWA +LLRMYTRWAE    K E LE   GEEAGI
Sbjct: 61  SLLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DS++RRHTSFSSIWVYPVVDD+IEI+I E
Sbjct: 121 KSATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVVDDTIEIDIEE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DCRIDTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH+NK   W+MLRA+LY
Sbjct: 181 KDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKREE     E +KT+IGWG QIRSYVLQPYQM+KD RTN+E +    VL+GDLD 
Sbjct: 241 EHELQKREEKTKALEDTKTDIGWGHQIRSYVLQPYQMIKDTRTNVETSDTQGVLNGDLDQ 300

Query: 346 FMKATLAIK 354
           FM A+LA +
Sbjct: 301 FMAASLAAR 309


>gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
 gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
          Length = 376

 Score =  421 bits (1082), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/336 (60%), Positives = 260/336 (77%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D + +RL+ LN   EDP LW +   A+ +M+ER  L++A++ I  I   L DN+ L+EL 
Sbjct: 26  DRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDRITRDLTDNIELIELG 85

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
             E D S++ E +  L  +K E+  ++ ++LLSGEADSND YLEVHAGAGGT+SQDWA M
Sbjct: 86  EAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEVHAGAGGTDSQDWAEM 145

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY RW E+  FK E ++   GE+AG+KSAT+++KG NAYGWLK E GVHRLVRISP+
Sbjct: 146 LLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWLKTEAGVHRLVRISPF 205

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           DSN+RR TSF+SI VYPV+DD I +EI+ESD R+DT R+ GAGGQHVN T+SAVR+THIP
Sbjct: 206 DSNARRQTSFASIDVYPVIDDRIVVEINESDVRVDTMRSGGAGGQHVNKTESAVRLTHIP 265

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+ V  Q +RSQHKN+A AWNMLRAKL+E+EL+KREE A   ++++T+IGWG QIRSYV
Sbjct: 266 TGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQAARTDIGWGHQIRSYV 325

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LQPYQ+VKDLRT +   +P +VLDGDLD FM+A LA
Sbjct: 326 LQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALA 361


>gi|306840415|ref|ZP_07473178.1| peptide chain release factor 2 [Brucella sp. BO2]
 gi|306289615|gb|EFM60824.1| peptide chain release factor 2 [Brucella sp. BO2]
          Length = 292

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 192/278 (69%), Positives = 237/278 (85%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  EE D SI+++    ++ +K E++ +Q + LLSGEAD+ND YLEVHAGAGGTESQDWA
Sbjct: 1   MGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEVHAGAGGTESQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMYTRWAE+   K E +E+H+GEEAGIKSAT+L+KG N+YG LK E GVHRLVRIS
Sbjct: 61  SMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLKTESGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           PYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQHVNTTDSAVRITH
Sbjct: 121 PYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           I TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE  +   ++KT+IGWG QIRS
Sbjct: 181 IATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANATKTDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVLQPYQ+VKDLRT +E T+P +VLDG +  FM+A LA
Sbjct: 241 YVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALA 278


>gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
 gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
          Length = 322

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/307 (65%), Positives = 248/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +++ E+ + L+ ++ EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMY RWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 373

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/341 (58%), Positives = 250/341 (73%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A ++L  LN + EDP LW +   A+ + RER  L   I  + E++  L + ++L 
Sbjct: 23  LDWDVANRKLDELNARVEDPTLWNDPDAAQAVSRERSRLKTQIDTVLEMESGLEEGVMLA 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++A EE D + L+E    L+ IK      + E+LLSGEAD NDAYLEV++GAGGTES DW
Sbjct: 83  DMADEEGDEATLEEARAALKAIKDRASRAELEALLSGEADGNDAYLEVNSGAGGTESCDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY+RWA+   ++ +     DG++AGIKSAT+L+ GPNAYGWLK E GVHRLVRI
Sbjct: 143 AGMLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTGPNAYGWLKSESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYD+ ++RHTSF+S+ V PVVDD+IEI+I+ +D R DTYRASG+GGQH+N TDSAVR+T
Sbjct: 203 SPYDAAAKRHTSFASVGVSPVVDDTIEIDINPADVRTDTYRASGSGGQHINKTDSAVRLT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPT  VV CQ  RSQH+N+ QAW MLR +LYELELQKRE  A     +KT+IGWG QIR
Sbjct: 263 HIPTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKREAAAQALADAKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 323 SYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAAR 363


>gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199]
 gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199]
          Length = 322

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/309 (63%), Positives = 246/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+  +  + ++   L D L+L+EL   E D + + +    L+ I+++ E  Q E
Sbjct: 1   MQERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESMQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLEVHAGAGGTE+QDWA MLLRMYTRW+E+R FK E LE   GEEAG+
Sbjct: 61  SLLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I + +
Sbjct: 121 KSATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVIDDSIDIVVED 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D ++DTYRASGAGGQHVN TDSA+RITH+P+G+VVQCQ +RSQH+N+A A  ML+A+LY
Sbjct: 181 KDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL++REE A+  E++K++IGWG QIRSYVLQPYQMVKDLRTN E ++P+ VLDGD+D 
Sbjct: 241 EAELKRREEEASATEATKSDIGWGHQIRSYVLQPYQMVKDLRTNEESSNPAAVLDGDIDA 300

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 301 FLEAALAAR 309


>gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255]
 gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           winogradskyi Nb-255]
          Length = 322

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/307 (64%), Positives = 250/307 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +++ E+ + L+ +K EV+ ++ E
Sbjct: 1   MQERTSLEDSLAGIGKVERELEDQIGMIELGEAENDEAVIDESENALKALKKEVDRRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMYTRWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWAAMLLRMYTRWAEKRGFKVEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATVQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL++REE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDG+LDD
Sbjct: 241 EIELKRREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGNLDD 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1]
 gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1]
          Length = 375

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/339 (58%), Positives = 259/339 (76%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DW+ A++RL  LN + +DP LW +  EA+ + RE++ L++A++ + EI   + D +  +
Sbjct: 23  LDWERALRRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAVNTVNEISAEMGDAVEFI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+   E + SI+ +   +L+++    +  + ++LLSGEAD ND YLE+HAGAGGTESQDW
Sbjct: 83  EMGEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGNDTYLEIHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ K E GVHRLVRI
Sbjct: 143 AEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDNAYGYAKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDS ++RHTSFSS+WVYPV+DD I+IEI+ +D +IDTYRASGAGGQHVNTTDSAVRIT
Sbjct: 203 SPYDSAAKRHTSFSSVWVYPVIDDDIDIEINPADLKIDTYRASGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VV  Q +RSQHKN+A A NML+A+L+E E+ +RE  A+     K+EIGWG QIR
Sbjct: 263 HQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQEKSEIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT +  +SP  VLDGD+DD++ A LA
Sbjct: 323 SYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALA 361


>gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
 gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
          Length = 322

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/307 (65%), Positives = 247/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+N +  I   +  L D + ++EL   E+D +++ E  + L+ +K +V  ++ E
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGMIELGEAENDEAVVTEAENALKALKKDVARQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
 gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
          Length = 375

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/352 (57%), Positives = 250/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD A  RL   N + EDP+LW +  +A+ LMRERQ L +AI     
Sbjct: 11  EIEKSLELLRQRMDWDTAKHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + DN+ L+EL   E D  ++ E    L+ +K +   K+ E+LL+GEAD+ND +LE+
Sbjct: 71  INQEMSDNIELIELGEMEGDNEVIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD IEIE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDDIEIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAM 361


>gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
 gi|123361814|sp|Q165J6|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
          Length = 374

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/352 (57%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L    D + A  RL   N + EDP LW +   A+ LMRERQ L +A++    
Sbjct: 11  KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN+ L+EL   EDD  ++ +  + L+ ++     K+ E+LL GEADSND +LEV
Sbjct: 71  IKQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E   + DG+EAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+IE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLAL 361


>gi|163731562|ref|ZP_02139009.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
 gi|161395016|gb|EDQ19338.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
          Length = 374

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L    D + A  RL   N + EDP LW +   A+ LMR+RQ L +A++    
Sbjct: 11  KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN+ L+EL   EDD  ++ +  + L+ ++     K+ E+LL GEADSND +LEV
Sbjct: 71  IKQEMADNIELIELGEMEDDADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWANML RMY RWAEK+ +K E   + DG+EAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWANMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+I+++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIDVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLAL 361


>gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14]
 gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           hamburgensis X14]
          Length = 322

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/309 (64%), Positives = 250/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +I+ ++ + L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  + YLEVHAGAGGTESQDWA+MLLRMY RWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ++EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 QIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA K
Sbjct: 301 FMAATLAQK 309


>gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11]
 gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11]
          Length = 374

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/351 (57%), Positives = 252/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    DW+ A  RL   N + EDP+LW +   A+ LMRERQ L +AI   K I
Sbjct: 12  IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   EDD  ++++  + L  +K +   K+ E+LL GEADSND +LE++
Sbjct: 72  KQELADNIELIELGEMEDDNEVVKDAEEALVALKEKAAEKELEALLDGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ +D R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPADIRVDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|163739752|ref|ZP_02147160.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
 gi|163741027|ref|ZP_02148420.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386018|gb|EDQ10394.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386982|gb|EDQ11343.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
          Length = 374

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/351 (57%), Positives = 251/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +AI   K I
Sbjct: 12  IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   E+D  ++ +    L+ +K +   K+ E+LL GEADSND +LE++
Sbjct: 72  KQDLSDNMELIELGEMEEDAEVISDAEAALKTLKEKAAEKELEALLDGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 252 VNTTDSAVRITHEPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNADINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
 gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
          Length = 375

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    D++ A+ RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  EIEKSLELLAQRMDYETALHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++Q+  D +Q+++ +   K+ E+LL GEADSND +LE+
Sbjct: 71  IKTDLSDNIELIELGEMEEDGEVVQDAEDAIQKLRAKSAKKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMAATLAL 361


>gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
 gi|123128746|sp|Q0C0Y0|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
          Length = 368

 Score =  411 bits (1057), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/339 (60%), Positives = 252/339 (74%), Gaps = 2/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DWD A +RL  L   +E P+ W +  EA+ +MRERQ L + I+ ++ ++  + D   L+
Sbjct: 23  LDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQTLEKDVADAPELM 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  E D S+L +    L+R        +  +LLSGEAD ND YL+++AG GGTESQDW
Sbjct: 83  ELA--EGDASMLADLEATLRRAAARAAEAELAALLSGEADGNDCYLQINAGEGGTESQDW 140

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A++L RMY RWAEKR +  E L+  DGEEAGIKSATL IKG NAYGWLK EQGVHRLVRI
Sbjct: 141 ASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWLKSEQGVHRLVRI 200

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS++RRHTSFSS+ V PV+DD I++EI+ SD R DTYRASGAGGQHVN TDSAVR+T
Sbjct: 201 SPFDSSARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTYRASGAGGQHVNRTDSAVRLT 260

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPT  VVQCQ  RSQH+N+ +AW MLR+KLYELELQKR  +A+   + K+ IG+G QIR
Sbjct: 261 HIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYADKSAIGFGHQIR 320

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT +E +  S VLDGD+D F+ A LA
Sbjct: 321 SYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALA 359


>gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
 gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
          Length = 375

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/351 (58%), Positives = 245/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL  +N   ED  LW +   A+ LMRERQ L +AIS  K I
Sbjct: 12  IGRSLALLGQRMDVETAPHRLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  I+ E    L+ +      K+ E+LL GEAD ND +LEV+
Sbjct: 72  ETGLRDNVELIEMGEAEGDAEIVSEAEQALRDLVELARGKELEALLDGEADGNDTFLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E   + DGEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I   D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPAGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+      LRA+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREACMVALRARLYQLELDKRNAAVNAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMAATLAM 361


>gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21]
 gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21]
          Length = 375

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 257/339 (75%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DW+ A++RL  L+ + +DP LW +  +A+ + +E++ L+ AI+ ++EI+  + D +  +
Sbjct: 23  LDWERALRRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAINTVREIESEMGDAMEFV 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+   E D  ++ E   +L  +    +  + ++LLSGEAD ND+Y+E+HAGAGGTESQDW
Sbjct: 83  EMGEAEGDDDVVNEGLTSLSTLADRADRDKVQALLSGEADGNDSYIEIHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ K E GVHRLVRI
Sbjct: 143 AEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGENAYGYAKTESGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPYDS++RRHTSFSS+WVYPV+DD I+IEI+ SD +IDTYRASGAGGQHVNTTDSAVRIT
Sbjct: 203 SPYDSSARRHTSFSSVWVYPVIDDDIDIEINPSDLKIDTYRASGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VV  Q +RSQHKNKA A NML+A+L+E E+ +RE  A+     K++IGWG QIR
Sbjct: 263 HQPTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAAASGEYQEKSDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQMVKDLRT +   +P DVLDG LD F+ A LA
Sbjct: 323 SYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALA 361


>gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
 gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
          Length = 375

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ L ++I+  K 
Sbjct: 11  EIEKSLELLAQRMNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++++  ++L+ +K     K+ E+LL GEAD+ND +LE+
Sbjct: 71  IKQDLSDNIELIELGEMEEDAEVVKDAEESLKALKERAAEKELEALLDGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ SD R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRVDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRHAEINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAM 361


>gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
 gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
          Length = 333

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 194/320 (60%), Positives = 246/320 (76%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ +MRER  L N I  ++ ++  + D   L+ELA  E D  ++ E    L+ 
Sbjct: 1   MWNDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRD 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E + ++ ESLLSGEADSND YLEV+AGAGGTE+QDW  MLLRMYTRWAE   +K   
Sbjct: 61  LAEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E  +GE+AG+KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV
Sbjct: 121 MESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DDSIEIEI+++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A
Sbjct: 181 IDDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRA 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  MLRA+LYE ELQKRE  A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E  +
Sbjct: 241 TAMQMLRARLYEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGN 300

Query: 335 PSDVLDGDLDDFMKATLAIK 354
           P  VLDGDLD FM A LA++
Sbjct: 301 PDAVLDGDLDAFMAAALAMR 320


>gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
 gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
          Length = 370

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/351 (55%), Positives = 255/351 (72%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + +  L    DWD + +RL  LN  +EDP  W +   A+ LMRER  +  A+  I  
Sbjct: 11  KIQQSIELLRRRLDWDVSSKRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAMDDITA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   + E+A  E D S+L++  ++++   +  E  +  +LLSGE D ND ++E+
Sbjct: 71  LETEISDAEEMAEMAEMEGDDSLLEDIVESMKAALIRAERAELSALLSGEVDGNDCFVEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTESQDWANML RMY RWA     K E L+ HDGEEAGIKSATL + G NAYGWL
Sbjct: 131 NAGAGGTESQDWANMLRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGENAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN++RHTSFSS+ V PV+DD+IE+EI + D R DTYRASG+GGQ
Sbjct: 191 KSESGVHRLVRISPFDSNAKRHTSFSSVAVSPVLDDTIEVEIEDKDVRTDTYRASGSGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSA+R+TH PTG+VV CQ +RSQHKN+A AWNMLRA++YEL++++R E A     
Sbjct: 251 HINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEAAQANAD 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KT+IGWG QIRSYVLQPYQM+KDLRT +E +    VLDGDLD F+ A+L+
Sbjct: 311 AKTDIGWGHQIRSYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLS 361


>gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 323

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/310 (62%), Positives = 242/310 (78%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRER  L N I  ++ ++  + D   L+ELA  E D  ++ E    L+ +  E + ++ 
Sbjct: 1   MMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDLAEEAKRRET 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ESLLSGEADSND YLEV+AGAGGTE+QDW  MLLRMYTRWAE   +K   +E  +GE+AG
Sbjct: 61  ESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSEGEQAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+L+ GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEIEI+
Sbjct: 121 LKSATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A A  MLRA+L
Sbjct: 181 DADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE ELQKRE  A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E  +P  VLDGDLD
Sbjct: 241 YEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGDLD 300

Query: 345 DFMKATLAIK 354
            FM A LA++
Sbjct: 301 AFMAAALAMR 310


>gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 322

 Score =  408 bits (1048), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/309 (62%), Positives = 247/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L N I  +++++  + D + L+ELA  E D  ++ E    L+ +  E + ++ E
Sbjct: 1   MRERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEAKRRETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AG+
Sbjct: 61  SLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEI+I+E
Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A A  ML+A++Y
Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+RE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P  VLDGDLDD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNMEKTNPGAVLDGDLDD 300

Query: 346 FMKATLAIK 354
           FM A+LA +
Sbjct: 301 FMAASLAAQ 309


>gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 375

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/352 (56%), Positives = 253/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    D++ A  RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  EIQKSLELLAQRMDYETAAHRLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++++  + L++++ +   K+ E+LL GEAD+ND +LE+
Sbjct: 71  IKTDLKDNVELIELGEMEGDEEVVKDAEEALKKLRDKAAEKELEALLDGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ +D R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRVDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDL  FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAM 361


>gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 377

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/339 (56%), Positives = 253/339 (74%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            DW+ A  RL+ LN K EDP+LW +   A+ +MR+RQ L+ ++   K +Q    D L L+
Sbjct: 23  LDWETAEDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRLQRDYDDALTLI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D + + E    L+R+ LE   +  E++LSGEAD    Y+EVHAGAGGTESQDW
Sbjct: 83  ELGEAESDEASVSEGEAALKRVDLEAHRRSVEAMLSGEADGMSTYVEVHAGAGGTESQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML RMY RW E+R +K + ++   GEEAGIKSAT  I G NA+GWLK E GVHRLVRI
Sbjct: 143 ASMLARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLKTEAGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSF+S+ VYPV+DD+IE++I+ +D  I   R+SGAGGQHVN T+SAVR+ 
Sbjct: 203 SPFDSNARRHTSFASVTVYPVIDDTIEVDINPADVDISFARSSGAGGQHVNRTESAVRLV 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H P+G+V+  Q++RSQH+NK  A+  L+A+LYE+EL+KRE  AN  +++KT+IGWG QIR
Sbjct: 263 HKPSGIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQAAKTDIGWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVLQPYQ+VKDLRT  + T+PS+VLDGD+D F++A L+
Sbjct: 323 SYVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALS 361


>gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
 gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
          Length = 374

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S+ L  L    D + A  RL   N + EDP+LW +   A+ LMR+RQ L ++I+  + 
Sbjct: 11  KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++ E    L+++      K+ E+LL+GEAD ND +LE+
Sbjct: 71  IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I GPNAYGWL
Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361


>gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
 gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
          Length = 374

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S+ L  L    D + A  RL   N + EDP+LW +   A+ LMR+RQ L ++I+  + 
Sbjct: 11  KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++ E    L+++      K+ E+LL+GEAD ND +LE+
Sbjct: 71  IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I GPNAYGWL
Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAALAL 361


>gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131]
 gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides
           KD131]
          Length = 375

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/350 (58%), Positives = 244/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  K I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYKLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E    ++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEAAIRALVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360


>gi|39935519|ref|NP_947795.1| peptide chain release factor 2 [Rhodopseudomonas palustris CGA009]
 gi|39649371|emb|CAE27894.1| translation peptide releasing factor RF-2 [Rhodopseudomonas
           palustris CGA009]
          Length = 322

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/307 (65%), Positives = 250/307 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E D  I++E  D L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMY RWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|91976917|ref|YP_569576.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB5]
 gi|91683373|gb|ABE39675.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB5]
          Length = 322

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/307 (65%), Positives = 250/307 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++A++ I +++  L DN+ ++EL   E D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDALTGIGKVERELTDNVEMIELGEAEGDDGVVSEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1]
 gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
 gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides 2.4.1]
 gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
          Length = 375

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/350 (58%), Positives = 245/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E   +++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360


>gi|114326944|ref|YP_744101.1| peptide chain release factor 2 [Granulibacter bethesdensis CGDNIH1]
 gi|114315118|gb|ABI61178.1| bacterial peptide chain release factor 2 (RF-2) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 323

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/303 (61%), Positives = 238/303 (78%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRER  L + +  +  ++  + D   L E+A  + D ++  +    L+ I  E +  + 
Sbjct: 1   MMRERTRLASQVEGVLRMESEVSDATELAEMAEADGDEAMATDARRMLETIAAEAKRLEI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ESLLSGEAD NDAYLE+++GAGGTE+QDWA MLLRMYTRWAE   +K   +E  DGE+AG
Sbjct: 61  ESLLSGEADGNDAYLEINSGAGGTEAQDWAEMLLRMYTRWAEAHGYKVTLIEQSDGEQAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSATL + GP+AYGWLK E GVHRLVRISP+DS +RR TSF+SIWVYPVVDD+IEIEI+
Sbjct: 121 IKSATLQVAGPSAYGWLKTEAGVHRLVRISPFDSAARRQTSFASIWVYPVVDDNIEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A NML+A+L
Sbjct: 181 EADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQTDRSQHRNRATAMNMLKARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE ELQKRE  A   E++K+EIGWG QIRSYVL PYQ+VKDLRTN+EK +P  VLDGDLD
Sbjct: 241 YEAELQKREAAAQEQENAKSEIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPGAVLDGDLD 300

Query: 345 DFM 347
           +FM
Sbjct: 301 EFM 303


>gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
 gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
          Length = 322

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/309 (65%), Positives = 246/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+N +  I   +  L D + L+EL   E+D +++ E    L  +K +V  ++ E
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGLIELGEAENDAAVVAEAEAALAALKKDVARQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEFLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA K
Sbjct: 301 FMAATLAQK 309


>gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029]
 gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 375

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/350 (58%), Positives = 245/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E   +++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETAGAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360


>gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
 gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
          Length = 375

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/353 (56%), Positives = 262/353 (74%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ + L  L    DWD A  R+   +  +E+P LW N  +A+ LMRERQ L ++IS  K
Sbjct: 10  VEIHKSLELLKQRMDWDTAEHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFK 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+   L DN+ L+EL   E+D  I++E  +N+  I+ E   ++ E+LL+GE DSND +L+
Sbjct: 70  ELSSNLQDNIELIELGEIEEDEVIIKEAENNILIIQQESAKQELEALLNGEVDSNDTFLQ 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGTES DWANML RMY RWAE++ ++ + +E   G+EAGIKS T  IKG NAYGW
Sbjct: 130 INAGAGGTESCDWANMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGW 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHRLVRISP+DSN++RHTSFSS+WVYPVVDD+I+IEI+ S+ R+DTYR+SGAGG
Sbjct: 190 MKSESGVHRLVRISPFDSNAKRHTSFSSVWVYPVVDDNIDIEINPSEIRVDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPT +VVQ   E+SQH+N+A     L+++LYELE++KR E      
Sbjct: 250 QHVNTTDSAVRITHIPTNIVVQS-SEKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAH 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +K + GWG QIRSYVL PYQMVKDLRTN+E +    VL+GDLD FM ATLA+
Sbjct: 309 DNKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLAL 361


>gi|90424348|ref|YP_532718.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB18]
 gi|90106362|gb|ABD88399.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB18]
          Length = 322

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/307 (65%), Positives = 249/307 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++  I +++  L DN+ ++EL   E+D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLGGIGKVERELTDNVDMIELGEAENDEGVVAEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVD++I+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVVDNTIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKNKAQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMGATLA 307


>gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193]
 gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193]
          Length = 374

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/352 (55%), Positives = 253/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ+L +AI   K 
Sbjct: 11  EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ +  + L+ +K+    K+ E+LL GEADSND +LE+
Sbjct: 71  IKQDLADNIELIELGEMEEDQEVITDAEEALKALKVSAAEKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEI+++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIDVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 310 NKGDAGWGSQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
 gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
          Length = 375

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP+LW N   A+ LMRERQ L +A+   K I
Sbjct: 12  IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   EDD  ++++    L+ ++     K+ E+LL GEAD ND +LE++
Sbjct: 72  ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYD+ ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDG LD FM ATLA+K
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAMK 362


>gi|115524982|ref|YP_781893.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisA53]
 gi|115518929|gb|ABJ06913.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisA53]
          Length = 322

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/307 (65%), Positives = 251/307 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++  I +++  L DN+ ++EL   E D S++ E    L+++K +V  ++ E
Sbjct: 1   MQERTSLEDSLDGIGKVERELDDNVGMIELGEAEGDDSVVAEAEAALKKLKKDVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+ ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSVQIFPVVDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKNKAQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025]
 gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 375

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/350 (57%), Positives = 244/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IKRSLELLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E    ++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDTEIVTEAEAAIRTLVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  ++ RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANEIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY++EL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQMELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360


>gi|86750123|ref|YP_486619.1| peptide chain release factor 2 [Rhodopseudomonas palustris HaA2]
 gi|86573151|gb|ABD07708.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris HaA2]
          Length = 322

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/307 (64%), Positives = 250/307 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E D  +++E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAEGDEGVVREAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
 gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
          Length = 374

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S+ L  L    D D A  RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  QISKSLELLAQRLDVDTAPYRLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  +++E    L+ +      K+ E+LL+GEADSND +LE+
Sbjct: 71  IKQELADNVELIELGEMEGDEEVIKEAEVALKSLAATAAQKELEALLNGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K +      GEEAGIKSAT  I+G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M ATLA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLAL 361


>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
 gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
          Length = 319

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 194/307 (63%), Positives = 244/307 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE+  L+NA++  +E++  L D+L L+ELA  E D  ++ +    +  +K      + E
Sbjct: 1   MREKTQLENALTGTRELERDLRDSLELIELAEAEGDAEMVADAEKTIAALKERAAKMELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND +LEV++GAGGTESQDWA MLLRMYTRWAE+  +K + L+   GEEAGI
Sbjct: 61  SLLSGEADANDCFLEVNSGAGGTESQDWALMLLRMYTRWAEQHGYKVDELDETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ IKG N YGWLK E GVHRLVRISP+DS +RRHTSF+S+ V PV+DD I +EI+E
Sbjct: 121 KSATIQIKGHNGYGWLKTESGVHRLVRISPFDSQARRHTSFASVSVTPVIDDRIVVEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D ++DTYR+SGAGGQHVN TDSAVR+TH+PTG+VV CQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 KDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDMLRARIY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   E++KTEIGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD 
Sbjct: 241 EMELRKREEAAAALEATKTEIGWGHQIRSYVLQPYQMVKDLRTGVETSDSGGVLDGDLDR 300

Query: 346 FMKATLA 352
           F++A LA
Sbjct: 301 FLQAALA 307


>gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222]
 gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus
           denitrificans PD1222]
          Length = 402

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/351 (56%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  LG   DW+ A  RL  LN   E   +W +   A+ LMR+RQ L +A+   + I
Sbjct: 39  IRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRRI 98

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN  L+EL   E D  I+ +    L+ +      K+ E+LL+GEAD ND +LE++
Sbjct: 99  ESELKDNAELIELGEAEGDDEIVADAEAALKSLAELAAQKELEALLNGEADGNDTFLEIN 158

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +  E L    GEEAGI+SA   I GPNAYGWLK
Sbjct: 159 AGAGGTESADWASMLARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWLK 218

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI I +++ RIDTYR+SGAGGQH
Sbjct: 219 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEITIPDNEIRIDTYRSSGAGGQH 278

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV    E+SQH+N+A A   L+A+LY+LEL KR    N    +
Sbjct: 279 VNTTDSAVRITHLPTGIVV-TSSEKSQHQNRANAMAALKARLYQLELDKRNAAINAQHEA 337

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVL PYQMVKDLRT  E +    VLDG LD FM ATLA+
Sbjct: 338 KGDAGWGNQIRSYVLHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLAL 388


>gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
 gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
          Length = 322

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/307 (62%), Positives = 241/307 (78%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  LD +++  + ++  L D+L L+E+   E+D +++ +    L  ++      Q E
Sbjct: 1   MRERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANKLQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND ++EV+AGAGGTE+QDWA ML+RMYTRWAE+  +KTE L+   GEEAGI
Sbjct: 61  SLLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ IKG NAYGWLK E GVHRLVRISP+DS +RR TSF+++ + PV+DD I+IEI+E
Sbjct: 121 KSATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVIDDKIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DCRIDTYRASGAGGQH+N TDSAVRITHIPT +VV CQQERSQHKN+A+AW+MLRA+LY
Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+ RE+ A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E +    VLDG LD 
Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGALDP 300

Query: 346 FMKATLA 352
           F++A LA
Sbjct: 301 FLEAALA 307


>gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
 gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
          Length = 375

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L     W+ A  RL   N + EDP LW +   A+ LMRERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHDG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I++ L DNL L+EL   E D  ++ E    ++ +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKNELEDNLGLIELGEAESDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      G+EAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV   Q +SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 251 HVNTTDSAVRITHMPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD+FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361


>gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217]
 gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217]
          Length = 375

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/352 (56%), Positives = 247/352 (70%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L     W+ A  RL   N + EDP LW +   A+ LMRERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L DNL L+EL   E+D  ++ E    ++ +      K+ E+LL GEADSND +LE+
Sbjct: 71  LKQELEDNLGLIELGEMENDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV   Q +SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQQELDRRNAAINEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD+FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361


>gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
 gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
          Length = 375

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/351 (56%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ L  L    D++    RL   N  TEDP+LW +  +A+ LMR+RQ L +A +   ++
Sbjct: 12  INKSLALLRQRMDFETVPHRLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAYNNYNKL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L+ +      K+ E+LL+GEADSND +LE++
Sbjct: 72  AQDLADNVELIELGEMEDDEDVVAEAEAGLRSVVEIAAKKELEALLNGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWANML RMY RWAE R +K E      GEEAGIKSA   I G NAYGWLK
Sbjct: 132 SGAGGTESCDWANMLARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSFSSIWVYPVVDD+I+IE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSIWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 252 VNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAL 361


>gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5]
 gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
 gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
 gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
          Length = 323

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/308 (62%), Positives = 239/308 (77%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           ++RER  L      +  I+    D L L ELA  E D S+L E    L+RI  E + ++ 
Sbjct: 1   MLRERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEAKRREI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ESLL+GEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   LE  +GE+AG
Sbjct: 61  ESLLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGEQAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ + G NAYGWLK E GVHRLVRISP+D+N+RR TSF+S+WVYPVVDDSIE+EI+
Sbjct: 121 IKSATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVVDDSIEVEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A  ML+++L
Sbjct: 181 PADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLKSRL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE+ELQKREE A   ES+K +IGWG QIRSYVL PYQ+VKDLRTN E  +P  VL+GDLD
Sbjct: 241 YEMELQKREEAAAASESAKRDIGWGHQIRSYVLAPYQLVKDLRTNFESGNPDAVLNGDLD 300

Query: 345 DFMKATLA 352
            FM A+LA
Sbjct: 301 AFMAASLA 308


>gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
 gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
          Length = 374

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/351 (54%), Positives = 248/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + LN L    D++ A  RL   + + EDP LW +   A+ LMR+RQ L + ++    I
Sbjct: 12  IQKSLNLLAQRMDYETARYRLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTLTMHDTI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  I+ E  + L+ ++ +   K+ E+LL GEAD+ND +LEV+
Sbjct: 72  KQELADNIELIEMGEMEGDADIITEAEEALKSLREKAAQKELEALLDGEADANDTFLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWANML RMY RWAEK+ +K E   +  G+EAGIKS T  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWANMLSRMYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHFPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD  M ATLA+
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTGFETSDTKGVLDGDLDGLMGATLAL 361


>gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
 gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
          Length = 322

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/307 (64%), Positives = 247/307 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++S I +++  L D++ ++EL   E D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDDGVVAEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA MLLRMYTRWAE   FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ V+PV+DDSI+I+I E
Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVIDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VL+G+LDD
Sbjct: 241 EMELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300

Query: 346 FMKATLA 352
           FM ATLA
Sbjct: 301 FMAATLA 307


>gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 322

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/302 (61%), Positives = 242/302 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L   +  ++ ++  + D L L+ELA  E D ++L++    L+ +  E + ++ E
Sbjct: 1   MRERTLLAGQVEGVQRLEADVRDTLDLVELAEMEGDDAVLKDAVQMLRALAEEAKRRETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEADSND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AG+
Sbjct: 61  SLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVALMESSEGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEIEI+E
Sbjct: 121 KSATIQVTGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D ++DT+RASGAGGQHVN T+SA+RITHIPTG++V CQ +RSQH+N+A A  ML+A++Y
Sbjct: 181 ADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+RE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRT++E+ +P  VLDGDLDD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTSVERGNPDAVLDGDLDD 300

Query: 346 FM 347
           FM
Sbjct: 301 FM 302


>gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
 gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
          Length = 375

 Score =  398 bits (1022), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/352 (54%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L+ L    +WD A  RL   N + EDP LW +   A+ LMR+RQ L +AI+  + 
Sbjct: 11  EIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASYEA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D++ L+E+   EDD  ++ E  D L+ +  +   K+ E+LL+GEAD+ND +LE+
Sbjct: 71  IRQELSDHVELIEMGEMEDDAGVVTEAEDGLKVLAAKAAEKELEALLNGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTE+ DWA ML RMY RWAE++ +K E      GEE GIKSA+  I G NAYGWL
Sbjct: 131 NSGAGGTEACDWAAMLARMYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++E+ KR  + N    
Sbjct: 251 HVNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIEMDKRSALVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAM 361


>gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
 gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
          Length = 375

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/350 (54%), Positives = 245/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    D++ A  RL   +   EDP+LW +   A+ LMR+RQ L +A+   + I
Sbjct: 12  IRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   E D  ++ +  + L+ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  KQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA+ML RMY RWAE + +  E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+V     E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 252 VNTTDSAVRITHVPTGIVT-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K + GWG QIRSYVLQPYQMVKDLRT  E +  + VLDGDLD  M ATLA
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLMSATLA 360


>gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b]
 gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b]
          Length = 375

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L     W+ A  RL   N + EDP LW +  +A+ LMR+RQ L +AI+    IQ  +
Sbjct: 16  LELLRQRMGWETARHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHDTIQQEM 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            DN+ L+EL   E D  ++ E    ++ +  +   K+ E+LL+GEAD+NDA+LE+HAGAG
Sbjct: 76  QDNVELIELGEMEGDPDVVAEAEAAIKALARKAAQKELEALLNGEADANDAFLEIHAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+ML RMY RWAE+  +  E      GEEAGIKS T  + G NAYGWLK E G
Sbjct: 136 GTESCDWASMLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGWLKSESG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ +D RIDT+R+SGAGGQHVN T
Sbjct: 196 VHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTFRSSGAGGQHVNKT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R E       +K + 
Sbjct: 256 DSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEAHDAKGDA 314

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVLQPYQMVKDLRT++E +    VLDGDLD FM ATLA+
Sbjct: 315 GWGNQIRSYVLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLAM 361


>gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2654]
          Length = 375

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/351 (56%), Positives = 246/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L     W+ A  RL  LN  TEDP LW +   A+ LMRERQ L   +   K +
Sbjct: 12  IEKSLALLRQRIGWETAEHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKAM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D++ L+EL   EDD  ++++    L+ +K      + E+LL+GEAD ND +LEVH
Sbjct: 72  EQEKNDSVELIELGEMEDDDEVVKDAEAALKALKERAAAAEIEALLNGEADPNDTFLEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA+ML RMY RWAE   +K E      GEEAGIKSAT  I G NAYGWLK
Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IE+E++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEVEVAPNDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY++EL +R +  N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD  M ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLAM 361


>gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
 gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
          Length = 375

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/350 (55%), Positives = 244/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D++ A  RL   N + EDP LW +   A+ LMR+RQ L +AI   + I
Sbjct: 12  IEKSLVLLAQRLDYETAPYRLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L  +K     K+ E+LL GEAD+ND +LE++
Sbjct: 72  SQELADNVELIELGEMEDDADVVTEAETALATLKDAAAQKELEALLDGEADANDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK  +K E      G+EAGIKSA+  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD  M ATLA
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLA 360


>gi|154248590|ref|YP_001419548.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
 gi|154162675|gb|ABS69891.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
          Length = 322

 Score =  395 bits (1014), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/307 (61%), Positives = 239/307 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++ +  I  +   L DN+ L+EL   E D  ++ E S +L  +K E+  ++ E
Sbjct: 1   MQERTTLEDGLGAIDRVLRDLDDNIELIELGEAEGDEGVITEASASLDGLKAELARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND+YLEVHAGAGGT+SQDWA MLLRMY RW E+  FK E ++   GE+AG+
Sbjct: 61  ALLSGEADSNDSYLEVHAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELMDESQGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ +KG NAYGWLK E GVHRLVRISP+DSN+RR TSF+S+ VYPVVDD I ++I E
Sbjct: 121 KSATIQVKGHNAYGWLKTEAGVHRLVRISPFDSNARRQTSFASVDVYPVVDDRIVVDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT R+ GAGGQHVN T+SAVR+THIPTG+ V  + +RSQHKN+A AWNMLRAKLY
Sbjct: 181 ADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVSEGDRSQHKNRATAWNMLRAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LEL+KRE  A   +++KT+IGWG QIRSYVLQPYQ+VKDLRT +   +P +VLDGDLD 
Sbjct: 241 DLELKKREAEAAAEQAAKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDP 300

Query: 346 FMKATLA 352
           FM+A LA
Sbjct: 301 FMQAALA 307


>gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
 gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
          Length = 375

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/351 (56%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N   E   LW +   A+ LMRERQ L + +   + I
Sbjct: 12  VRKTLRLLAQRMDLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRRI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  I+ E   +L+ +K     K+ E+LL GEAD ND +LE++
Sbjct: 72  DRDLTDNIELIELGEMEDDPEIVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMYTRWAEK+ +  E      G+EAGI+S    I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR VRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I  SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRQVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPASDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N LRA+LY++EL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALRARLYQMELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K E GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLAM 361


>gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
 gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
          Length = 374

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/352 (55%), Positives = 250/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S+ L  L    + + A  RL   N + EDP+LW +   A+ LMRERQ L ++I+  + 
Sbjct: 11  QISKSLELLAQRLNVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D++ L+E+   E+D  ++ E    L+ +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKQELADHVELIEMGEMENDAEVVAEAEAALKALAETAAQKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWANILARMYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361


>gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069]
 gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella
           koreensis DSM 16069]
          Length = 365

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/349 (53%), Positives = 259/349 (74%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++  L G  D+D+  +RL  +  + E P +W +   A+ L +ER  L+  ++ IK++
Sbjct: 14  MSERVTTLRGYLDFDSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + DN  LLEL++EEDD   + E  + ++++   +E  +F  + SGE D N+AYL++ 
Sbjct: 74  EAGIDDNQELLELSVEEDDAESVAEIENEVKQLNTSLEKLEFRRMFSGEMDENNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA++LLRMY RW E R FK E  E  DG+ AGIKSAT+ ++G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI+IE++ +D R+DTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+R+THIPTG+VVQCQ +RSQHKN+AQA +M++AKLYELE+QK+ E     E +
Sbjct: 254 VNKTDSAIRLTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT  E ++ + VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDQSR-IKDLRTGHESSNTTAVLDGDLDSFIEASL 361


>gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
 gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
          Length = 374

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/352 (55%), Positives = 252/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ L +A+   K 
Sbjct: 11  EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ +  + L+ ++ +   K+ E+LL GEADSND +LE+
Sbjct: 71  IKQDLADNIELIELGEMEEDEEVVADAEEALKALQQKAAEKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHNPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S  + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 310 SAGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
 gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
          Length = 350

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/342 (54%), Positives = 247/342 (72%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           GLFD   A +RL  L   T +P LW + + A+ L+RE+  L+  ++ + +++  L D L 
Sbjct: 3   GLFDIKTATKRLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDTLE 62

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L  LA  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES 
Sbjct: 63  LEALAETENDLETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTESH 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLV
Sbjct: 123 DWASIMMRMYLRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLV 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVR
Sbjct: 183 RISPFNAAGKRMTSFASSWVYPEIDDNISITIDDKDLRIDTFRASGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG Q
Sbjct: 243 ITHIPTGTVTQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWGHQ 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSY+LQPYQMVKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 303 IRSYILQPYQMVKDLRTDYETSDTRGVLDGNLEEFVSASLAM 344


>gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
 gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
          Length = 349

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/343 (53%), Positives = 250/343 (72%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD      RL  +  ++EDP LW++   A+ L RER  L+  +  ++E+  +L D
Sbjct: 4   VLGGIFDLPGKAARLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  ++ELA+ E D ++L+  + +L+  +  VE  +F+ + SG  D  DA++++ AGAGGT
Sbjct: 64  SAEMVELAVAEQDEALLEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGT 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWANMLLRMY  W E R F TE +E+ +GE AGIKSA+L ++G +A+GWL+ E GVH
Sbjct: 124 EAQDWANMLLRMYLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS +RRHTSF+S++VYP +DDS EIEI+ +D ++DTYRASGAGGQHVN TDS
Sbjct: 184 RLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VV CQ +RSQHKN+A+A  MLR+KLYELE+QKR       E +K++IGW
Sbjct: 244 AVRLTHIPTGIVVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGW 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E      VLDGDLD F++A L
Sbjct: 304 GHQIRSYVLDQSR-IKDLRTGVEVGDTQRVLDGDLDGFVEAAL 345


>gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601]
 gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Roseovarius sp. HTCC2601]
          Length = 373

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/353 (54%), Positives = 245/353 (69%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ LG   DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+     
Sbjct: 11  KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ E    L+ +  +   K+ E+LL GEAD ND +LE+
Sbjct: 71  IKQELSDNVELIELGEMEEDDEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA ML RMY RWAEKR ++ E      G EAGIKS    I G NAYGWL
Sbjct: 131 NAGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+   + R TSF+S+WVYPVVDD+IEI+++ SD R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIEIDVNPSDIRVDTYRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 250 HVNTTDSAVRITHMPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQHE 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA K
Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQK 361


>gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040]
 gi|122984362|sp|Q1GIB5|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp.
           TM1040]
          Length = 374

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/352 (54%), Positives = 245/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    +W+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+   K I
Sbjct: 12  IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D++ L+EL   E+D  ++++  D L+ +K +   K+ E+LL GE D NDA+LE+ 
Sbjct: 72  RQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLEIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+ML RMY RWAE R F  E  E   G EAGIKSAT  IKG NAYGWLK
Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+   + R TSF+++  YPV+DD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGTHRLVRISPFGKGT-RETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHEPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYV+QPYQMVKDLRTN E      VLDGDLD FM ATLA+K
Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361


>gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 364

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/349 (53%), Positives = 249/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L G  D+D   +RL  ++ + EDP++W N  +A+ L RER  L+  +  I  +
Sbjct: 13  LQGRVDALRGYLDYDAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A EEDD   +     +L   + +V   +F  + SGE D N+AY+++ 
Sbjct: 73  DKALGDTRDLLDMAAEEDDAETVSAVEADLANYENDVAQLEFRRMFSGEMDENNAYMDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RW E+R FKTE +E+ +GE AGIKSAT+  +GP AYGWL+
Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF++++V P VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFAAVFVSPEVDDSIEIEINPADLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH+P+GVVV CQ +RSQHKN+  A   L+AKLYELELQK+       E +
Sbjct: 253 VNRTESAIRITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 KSDIGWGSQIRSYVLDQSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASL 360


>gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5]
 gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5]
          Length = 367

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/331 (58%), Positives = 246/331 (74%), Gaps = 2/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL+ L    EDP LW +  +A+ ++RE + L +A++   EI  RL +++ +L    +ED
Sbjct: 30  ERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADFNEIH-RLLEDVKVLHEFCQED 88

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           + ++  E + NL +++  V   +   LLS E D ++AYL ++AGAGGTESQDW +ML+RM
Sbjct: 89  ESNV-DELTQNLAKLEKLVADYELTVLLSDEHDPSNAYLTINAGAGGTESQDWGSMLMRM 147

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTRWAEKRKFK   +E  +GEEAGIKS TL I+G  AYG LK E GVHRLVRISP+DSN+
Sbjct: 148 YTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYAYGNLKSETGVHRLVRISPFDSNA 207

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S++V P +DDSIE++I ESD RIDTYR+SGAGGQHVNTTDSAVRITH PTGVV
Sbjct: 208 RRHTSFTSVFVSPEIDDSIEVDIRESDLRIDTYRSSGAGGQHVNTTDSAVRITHTPTGVV 267

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            QCQ ERSQH+NK QA  MLRAKLYELEL+K+ +     E SK +I WG QIRSYVL PY
Sbjct: 268 TQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGLREVEDSKMDIAWGSQIRSYVLHPY 327

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +MVKDLRT  E  +   VLDG LD+F+KA L
Sbjct: 328 KMVKDLRTRHETGNAEAVLDGALDEFIKAYL 358


>gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
 gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
          Length = 375

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/351 (54%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  +    D + A  RL   N + EDP LW N   A+ LMR+RQ L + IS +  +
Sbjct: 12  IEKSITLVAQRMDRETASYRLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVDAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  ++ E    L+ ++     K+ E+LL GEAD ND +LE++
Sbjct: 72  ERDLRDNIELIEMGEAEGDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA++L RMY RWAEK+ +  E      GEEAGIKS +  I G NAYGWLK
Sbjct: 132 SGAGGTESCDWASILARMYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE+ + D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVQDKDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV   Q +SQH+N+  A   L+++LY++EL +R    N    S
Sbjct: 252 VNTTDSAVRITHLPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQIELDRRNAAINEAHES 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K   GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 311 KGSAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDGFMAATLAM 361


>gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083]
 gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 375

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/352 (55%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD A  RL   N + EDP LW +   A+ LM+ERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLDWDTAEFRLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D + ++EL   E+D  ++ E  + L  +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKQELSDQVEMIELGEMEEDEDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEKR +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAM 361


>gi|308198348|ref|YP_003933612.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
 gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
          Length = 364

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/349 (53%), Positives = 251/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D    RL  +N + EDP++W N   A+ L RER  L   +  + ++
Sbjct: 13  LSERTQTIRGYLDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D N+AYL++ 
Sbjct: 73  TSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E S
Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT IE++    VLDGDLD++++A+L
Sbjct: 313 KSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 360


>gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
 gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
          Length = 374

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/351 (55%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP LW +   A+ LMRERQ L +A+     I
Sbjct: 12  IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAMGNYDSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E+D  ++ E    L ++  +   K+ E+LL GEAD ND +LE++
Sbjct: 72  NQELSDNIELIELGEMEEDAEVVAEAEAALVKLADKAAKKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWANML RMY RWAEK+ +K E      G+EAGIKSA+  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRLDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAIKALKSRLYQMELDKRSTLVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M ATLA+
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMAATLAM 361


>gi|329889563|ref|ZP_08267906.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
 gi|328844864|gb|EGF94428.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
          Length = 300

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/289 (62%), Positives = 220/289 (76%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D ++L ++A EE D + L++  + L+ IK      + E+LLSGEAD NDAYLE+++GA
Sbjct: 5   LEDGIMLADMADEEGDEATLEDAREQLKAIKERAARAELEALLSGEADGNDAYLEINSGA 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTES DWA ML+RMY+RWA    ++        GE+AGIKSATL I GPNAYGWLK E 
Sbjct: 65  GGTESNDWAGMLMRMYSRWARAHGYEVTIEAEEQGEQAGIKSATLQIAGPNAYGWLKSES 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISPYD+ ++RHTSF+SI V PVVDD+IEI+I+ +D R DTYRASGAGGQH+N 
Sbjct: 125 GVHRLVRISPYDAAAKRHTSFASIGVSPVVDDTIEIDINPADVRTDTYRASGAGGQHINK 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH+PT  VV CQ  RSQH+N+ QAW MLRA+LYELELQKRE  A     +KT+
Sbjct: 185 TDSAVRLTHVPTNTVVACQAGRSQHQNREQAWKMLRARLYELELQKREAAAQALADAKTD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 245 IGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDPFMGAALAAR 293


>gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 364

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/345 (53%), Positives = 249/345 (72%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W +  +A+ L +ER  L+  +  IK ++  L
Sbjct: 17  LLCFGGIFDFDAKVERLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQGL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+G
Sbjct: 77  EDVEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 137 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSF++++VYP +DD+I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 197 IHRLVRKSPFDSNNRRHTSFAAVFVYPEIDDNIDIEINPADLRIDVYRASGAGGQHVNKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 257 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 317 GWGSQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 360


>gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
 gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
          Length = 374

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/352 (53%), Positives = 245/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    +W+ A  RL   N + EDP+LW +   A+ LMR+RQ L +AI   K I
Sbjct: 12  IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYKGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D++ L+EL   E+D  ++++  + L+ +K +   K+ E+LL GE D NDA+LE+ 
Sbjct: 72  RQDLDDSVELIELGEMEEDDEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLEIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+ML RMY RWAE R F  +  E   G EAGIKSAT  IKG NAYGWLK
Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+   + R TSF+++  YPV+DD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGTHRLVRISPFGKGT-RETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHEPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYV+QPYQMVKDLRTN E      VLDGDLD FM ATLA+K
Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361


>gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010]
 gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010]
          Length = 348

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/345 (53%), Positives = 250/345 (72%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D+  ++L  +  + E P +W +   A+ L +ER  L+  ++ +   +D L
Sbjct: 1   MTISGGIFDYDDKAEQLVEVTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EE+D       + +L  ++  +E  +F+ + SG+ D N AY+++ +G+G
Sbjct: 61  EDAKDLLELAVEENDQETFDAITADLDELEKGLEKLEFQRMFSGKLDKNSAYIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWAN+LLRMY RW E + +K E +E+  GE AGIKSAT+ ++G  A+G L+ E G
Sbjct: 121 GTEAQDWANILLRMYLRWGESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+SI+VYP VDD+IEI+I+ +D R+DTYRASGAGGQHVNTT
Sbjct: 181 VHRLVRKSPFDSGARRHTSFASIFVYPEVDDTIEIDINPADLRVDTYRASGAGGQHVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSA+RITH PT +VVQCQ ERSQHKNK QA N LRAKLYELELQK+ E+    E SK++I
Sbjct: 241 DSAIRITHEPTNIVVQCQNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 301 GWGSQIRSYVLDQSR-IKDLRTGVETGNTQAVLDGDLDQFIEASL 344


>gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
 gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
          Length = 351

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/342 (53%), Positives = 248/342 (72%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+DN V+RL  ++ + E P +W +  +A+ L +ER  L+  ++ IK +Q  L D 
Sbjct: 7   LGGIFDFDNKVERLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD +   E    L +++  +   +F  + SG  D+ D Y+++ AG+GGTE
Sbjct: 67  DGLLELAIEADDQATFDEAVAELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FK E +E+ DG+ AGIKSAT+ + G  A+GWL+ E G+HR
Sbjct: 127 AQDWTEMLLRMYLRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSFS+++VYP ++D I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSNNRRHTSFSAVFVYPEINDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQHKNK QA   L+AKLYELEL+K+       E SK++IGWG
Sbjct: 247 VRITHMPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 307 SQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347


>gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C]
 gi|122425715|sp|Q1RIY5|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C]
          Length = 368

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/352 (54%), Positives = 250/352 (71%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + +  RL+ L      P LW +   A+ L+RE+ +L+  +    +
Sbjct: 11  KIEQSLELLRRSLDVETSAARLAELEELAASPDLWNDQANAQKLLREKSNLEEQLGAYNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D L L E+A  E+D  I+Q+   +LQ +       + E L SGEADSN+ +LE+
Sbjct: 71  IRSNLKDALELEEMAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGWL
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQMVKDLRT+ E +    VLDGDL++F+ A+LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 362


>gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5]
 gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           cryohalolentis K5]
          Length = 349

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 186/341 (54%), Positives = 242/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E+P LW +   A  + +E+  LD  I  +  ++  L D  
Sbjct: 6   GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LELA+E +D S+L +    L   +  V   +F  + SGE D N+ YL++ +G+GGTE+
Sbjct: 66  AMLELAVEAEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE   FK E +E+  G  AGIKSAT+ IKG  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVV CQ ERSQH NKA A  MLRAKLYELE+QKR E     E  K+++GWG 
Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 306 QIRSYVLDDSR-IKDLRTGVETFNTGAVLDGDLDQFIEASL 345


>gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
 gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
          Length = 374

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/351 (54%), Positives = 242/351 (68%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    +W+ A  RL   N + EDP+LW +  +A+ LM++RQ L ++I+    I
Sbjct: 12  IEKSLELLRQRMNWETAQHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN  L+EL   EDD  ++ E    L+ +K     K+ E+LL+GEADSND +LE++
Sbjct: 72  RQELSDNAELIELGEMEDDQEVVAEAETALRALKERAAEKELEALLNGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAEKR +K E      G EAGIKS    I G NAYGWLK
Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+   + R TSF+S+WVYPVVDD+I+I+++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIDIDVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHEN 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K   GWG QIRSYVLQPYQMVKDLRT  E +    VLDG+LD FM ATLA+
Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLAM 360


>gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
 gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
          Length = 382

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/342 (53%), Positives = 247/342 (72%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL  +N + EDP++W N   A+ L RER  L   +  + ++   L D+
Sbjct: 38  FGGIFDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADS 97

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL++A+EE D   + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE
Sbjct: 98  RDLLDMAVEEGDEGAVGDVAGEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTE 157

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ +KG  A+GWL+ E GVHR
Sbjct: 158 AQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHVKGEYAFGWLRTEIGVHR 217

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 218 LVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSA 277

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IGWG
Sbjct: 278 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEMQKRTAASQALEDTKSDIGWG 337

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT IE++    VLDGDLD++++A+L
Sbjct: 338 HQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 378


>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
 gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
          Length = 373

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/353 (51%), Positives = 244/353 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  +   + G FD D   +RLS +  +   P  W +  +A+ L  ER HL+  +   K 
Sbjct: 14  KLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQELEAFKS 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D+ +L+E+A EE D S+L E    L  +   ++  + + +LSGE D N+A + +
Sbjct: 74  VEQKIEDSEVLIEMAEEEQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFDKNNAIVTI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA ML+RMY RWAE++ F+ E L++ + EEAGIKSATLLIKGP AYG+L
Sbjct: 134 HAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGPYAYGFL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G HRLVRISP+D+N+RRHTSF  + V P +D+ IE+EI E D RIDTYRASGAGGQ
Sbjct: 194 RAEHGTHRLVRISPFDANARRHTSFCGVIVVPEIDEDIEVEIKEEDLRIDTYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +N+ +A  +L+A+LYELE QKREE       
Sbjct: 254 HVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAQARG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSY+ QPY++VKD RT +E ++   V+DGD+D F++A L  K
Sbjct: 314 EHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQK 366


>gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
 gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
          Length = 375

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/353 (54%), Positives = 252/353 (71%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ + L+ L    +WD A  RL   N + EDP LW +   A+ LMR+RQ L +AI+  +
Sbjct: 10  VEIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYE 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+  L D++ L+E+   EDD  I+ E  + L+ +  +   K+ E+LL+GEAD+ND +LE
Sbjct: 70  VIKQELSDHIELIEMGEMEDDSDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLE 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +++GAGGTE+ DWA ML RMY RWAE++ +K +      GEE GIKSA+  I G NAYGW
Sbjct: 130 INSGAGGTEACDWAAMLARMYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGW 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N   
Sbjct: 250 QHVNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVH 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+
Sbjct: 309 ENAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAM 361


>gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4]
 gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           arcticus 273-4]
          Length = 349

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/341 (54%), Positives = 243/341 (71%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E+P LW +   A  + +E+  LD  I  +  ++  L D  
Sbjct: 6   GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LELA+EE+D S+L +    L   +  V   +F  + SGE D N+ YL++ +G+GGTE+
Sbjct: 66  AMLELAVEEEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE   FK + +E+  G  AGIKSAT+ IKG  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+ RHTSF++++V P +DD+IEI+++ +D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVV CQ ERSQH NKA A  MLRAKLYELE+QKR E     E  K+++GWG 
Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 306 QIRSYVLDDSR-IKDLRTGVETFNTGAVLDGDLDQFIEASL 345


>gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
 gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
          Length = 391

 Score =  378 bits (970), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/342 (52%), Positives = 251/342 (73%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L D 
Sbjct: 47  FGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 106

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L ELA EE D   L  + D+  +++  V   +F  + S  AD N+ ++++ AGAGGTE
Sbjct: 107 LDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 166

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+HR
Sbjct: 167 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 226

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 227 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 286

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++GWG
Sbjct: 287 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 346

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 347 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387


>gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054]
 gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424]
 gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia AU 1054]
 gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia HI2424]
          Length = 391

 Score =  378 bits (970), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/342 (52%), Positives = 251/342 (73%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L D 
Sbjct: 47  FGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 106

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L ELA EE D   L  + D+  +++  V   +F  + S  AD N+ ++++ AGAGGTE
Sbjct: 107 LDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 166

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+HR
Sbjct: 167 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 226

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 227 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 286

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++GWG
Sbjct: 287 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 346

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 347 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387


>gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72]
          Length = 349

 Score =  378 bits (970), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 245/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD ++  +RL  +N + E+P +W N   A  + +E+  LD  +  I  +  +L D 
Sbjct: 5   FGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +LELA+E+DD S+L +    L      VE  +F  + SGE D+N+ YL++ +G+GGTE
Sbjct: 65  AAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT+++KG  A+GWL+ E GVHR
Sbjct: 125 AQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+ RHTSF++++V P +DD+I I+I+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIGIDINPADLRIDTYRSSGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QKR E     E SK++IGWG
Sbjct: 245 VRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E ++ + VL+GDLD F++A+L
Sbjct: 305 SQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKFIEASL 345


>gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166]
          Length = 370

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 244/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL  +N + EDP++W     A+ L RER  L   +  I ++   L D+
Sbjct: 26  FGGIFDYDQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLADS 85

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLE+A EE+D   + +    ++R++  +E  +F  + S E D N+ YL++ AG+GGTE
Sbjct: 86  RDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTE 145

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWAN+LLRMY RWA+KR F  E +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHR
Sbjct: 146 AQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHR 205

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 206 LVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSA 265

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG
Sbjct: 266 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG 325

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 326 HQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDGYLEASL 366


>gi|114569849|ref|YP_756529.1| peptide chain release factor 2 [Maricaulis maris MCS10]
 gi|114340311|gb|ABI65591.1| bacterial peptide chain release factor 2 (bRF-2) [Maricaulis maris
           MCS10]
          Length = 321

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/313 (60%), Positives = 238/313 (76%), Gaps = 4/313 (1%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L+ AI+ + E +    D+L ++ELA  EDD  +++E    L  +   +   Q E
Sbjct: 1   MRERNRLEAAITTVVEAEQEYSDSLEIIELAEMEDDAEMVEEAVAGLNALAERMRRAQLE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD NDA++E+H+GAGGTESQDWA ML RMY+RWA    +K E +E   GEEAG+
Sbjct: 61  TLLSGEADGNDAFVEIHSGAGGTESQDWAAMLARMYSRWANAHGYKVETMEEQAGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+L+KG NAYGWLK E GVHRLVRISP+DS++RRHTSFSS+ VYP +DD+I+++I  
Sbjct: 121 KSTTILVKGENAYGWLKTEAGVHRLVRISPFDSSARRHTSFSSVGVYPQIDDAIDVDIDV 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG----VVVQCQQERSQHKNKAQAWNMLR 281
           S  R DTYRASGAGGQH+N TDSAVR+T+   G    VVVQCQ +RSQHKN++QAW+MLR
Sbjct: 181 SKVRTDTYRASGAGGQHINKTDSAVRLTYDMPGEEKPVVVQCQNDRSQHKNRSQAWDMLR 240

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           A++YE+ELQ+RE  A     SK+EIGWG QIRSYVLQPYQMVKDLRTN+E ++   VLDG
Sbjct: 241 ARVYEIELQRREAAAQAEADSKSEIGWGHQIRSYVLQPYQMVKDLRTNVETSNTGGVLDG 300

Query: 342 DLDDFMKATLAIK 354
           DLDDFM A LA +
Sbjct: 301 DLDDFMAAALAAR 313


>gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
 gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
          Length = 374

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/351 (54%), Positives = 237/351 (67%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP LW +   A+ LMRERQ L ++I     I
Sbjct: 12  IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L  +K     K+ E+LL GEAD ND +LE++
Sbjct: 72  ARELADNVELIELGEMEDDSEVVAEAEAALAALKERAAQKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAEKR +K E      G EAGIKS +  I GPNAYGWLK
Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+   + R TSF+S+WVYPVVDD+IEIEI+ S+ R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIEIEINPSEIRLDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 251 VNTTDSAVRITHLPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K   GWG QIRSYVLQPYQMVKDLRT  E +    VLDG LD FM ATLA+
Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAM 360


>gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD]
 gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           ambifaria AMMD]
          Length = 406

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 251/342 (73%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L D 
Sbjct: 62  FGGIFDYDAKSARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 121

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L ELA EE D   L  + D+ ++++  V   +F  + S  AD N+ ++++ AGAGGTE
Sbjct: 122 LDLFELAREEGDEDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 181

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+HR
Sbjct: 182 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 241

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 242 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTDSA 301

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  ESSKT++GWG
Sbjct: 302 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWG 361

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 362 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 402


>gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2]
 gi|75536187|sp|Q4UKS1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2]
          Length = 368

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/352 (53%), Positives = 250/352 (71%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D +++ +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDTLELEEMAEAENDLETLSQIEQDLKNLSVIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DW ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQMVKDLRT+ E +    VLDGDL+DF+ A+LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFVSASLAM 362


>gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5]
 gi|259585246|sp|C3PMX2|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5]
          Length = 368

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/352 (53%), Positives = 249/352 (70%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + + +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 311 TKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 362


>gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
 gi|225202976|gb|EEG85330.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
          Length = 347

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/341 (54%), Positives = 241/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   L D  
Sbjct: 4   GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     E    L  +  ++E  +F  + SGE DS D YL++ AG+GGTE+
Sbjct: 64  GLLELAVEADDEETFNEAIAELDVLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 124 QDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS ++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 184 VRKSPFDSGGRRHTSFSSAFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K++IGWG 
Sbjct: 244 RITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 304 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 343


>gi|71733798|ref|YP_276012.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 368

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 249/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D+   RL+ +N + EDP++W N   A+ L RER  L   +  + E+
Sbjct: 17  LSERSETIRGYLDYDHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEM 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ 
Sbjct: 77  SSGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQ 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+
Sbjct: 137 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQH
Sbjct: 197 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +
Sbjct: 257 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDT 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 317 KSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 364


>gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383]
 gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp.
           383]
          Length = 391

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 250/342 (73%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L D 
Sbjct: 47  FGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 106

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L ELA EE D   L  + ++  ++   V   +F  + S  AD N+ ++++ AGAGGTE
Sbjct: 107 LDLFELAREEGDEDTLVASEEDAAKLASRVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 166

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+HR
Sbjct: 167 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGIHR 226

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 227 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 286

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++GWG
Sbjct: 287 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 346

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 347 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387


>gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
 gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis E264]
          Length = 459

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 252/349 (72%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L+  ++ + E+
Sbjct: 108 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEGVVTTLTEL 167

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA EE+D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 168 DNDLRDAQDLFDLAREENDEDTLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 227

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 228 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGDYAYGYLR 287

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 288 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 347

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 348 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 407

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 408 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASL 455


>gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
 gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
          Length = 430

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/342 (53%), Positives = 243/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL+ +N + EDP +W     A+ L RER  L   +  + E+   L D 
Sbjct: 86  FGGIFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLADC 145

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL++A+EEDD   + +    L R++  +   +F  + S E D N+AYL++ AG+GGTE
Sbjct: 146 RDLLDMAVEEDDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTE 205

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHR
Sbjct: 206 AQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHR 265

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 266 LVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSA 325

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IGWG
Sbjct: 326 VRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWG 385

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTNIE++    VLDGD+D++++A+L
Sbjct: 386 HQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASL 426


>gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp]
 gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           mendocina ymp]
          Length = 378

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/342 (53%), Positives = 243/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D+   RL  +N + ED  +W     A+ L RER  L   +  I ++   L D+
Sbjct: 34  FGGIFDYDHKHDRLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLADS 93

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLE+A EE+D   + +    ++R++  +E  +F  + SGE D N+ YL++ AG+GGTE
Sbjct: 94  RDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGGTE 153

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHR
Sbjct: 154 AQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHR 213

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 214 LVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSA 273

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG
Sbjct: 274 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG 333

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 334 HQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDGYLEASL 374


>gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7]
 gi|24638155|sp|Q92IQ2|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish
           7]
          Length = 368

 Score =  374 bits (961), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/352 (53%), Positives = 249/352 (70%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + + +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAHLAM 362


>gi|254456112|ref|ZP_05069541.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083114|gb|EDZ60540.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 326

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 175/320 (54%), Positives = 243/320 (75%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           + + WQ+   +K +++E++  ++ ++  K   ++L D   + ELA EE++ ++ +E   N
Sbjct: 3   EANFWQDKNNSKNIIKEKKLYEDLLNIHKASIEKLIDLNDISELAAEEENQAVQKEILQN 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++ ++  V+  + +  LS E DS D Y+E+HAGAGGTESQDWA ML RMY +WA+++ FK
Sbjct: 63  IKDLRDLVKTNEIKCFLSNETDSLDCYIEIHAGAGGTESQDWAEMLRRMYLKWADQKNFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           +  +  H G+EAGIKS+T+ I+G   +GWLK E G+HRLVRISP+DS +RRHTSF+SIWV
Sbjct: 123 SNLISEHKGDEAGIKSSTIKIEGDYVFGWLKKESGIHRLVRISPFDSGARRHTSFASIWV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YPVVD++I IEI E D RIDTYR+SGAGGQHVNTTDSAVRITHIP+ +VVQCQ ERSQHK
Sbjct: 183 YPVVDENINIEIIEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPSKIVVQCQNERSQHK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK    NML+A+LY+ E++K+E+     E+SK+EIGWG QIRSYVLQPY++VKD RTN E
Sbjct: 243 NKETCINMLKARLYDYEIKKKEQKNQNTENSKSEIGWGHQIRSYVLQPYRLVKDNRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            T+P  +LDG++D F++ +L
Sbjct: 303 STNPDKILDGEIDGFLEQSL 322


>gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
 gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
          Length = 351

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/341 (52%), Positives = 243/341 (71%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +  + EDP +W +   A+ + +E+  L+N I+ ++ +  +L D  
Sbjct: 8   GGIFDYDLKKERLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQLEDAQ 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +L+LA+E DD S+L +    L   +  +   +F  + S   D N  Y+E+ AG+GGTE+
Sbjct: 68  AMLDLAVEADDESLLADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RW E+  FK E +E  DG+ AGIKSAT+ ++G  AYGWL+ E GVHRL
Sbjct: 128 QDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSFS+++V P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAV
Sbjct: 188 VRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IGWG 
Sbjct: 248 RLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGS 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 308 QIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLDKFIEASL 347


>gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
 gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
          Length = 367

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 252/349 (72%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363


>gi|313672869|ref|YP_004050980.1| bacterial peptide chain release factor 2 (brf-2) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 371

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/334 (55%), Positives = 246/334 (73%), Gaps = 3/334 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++LS +  +T DP  W +  E+K L++E+  +   +     +  R  D  +LLEL  +E+
Sbjct: 31  EKLSNIEKQTHDPDFWSSK-ESKHLLKEQSSIKKFLDDWYYLVRRFEDMDVLLEL--QEE 87

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             ++  E  +N   +K  V   + + +L+GE D N+A L +H+GAGGTE+ DWANMLLRM
Sbjct: 88  GENVAAEIEENFTELKQIVNDFELKLILNGENDINNAILTIHSGAGGTEANDWANMLLRM 147

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE RKFK E L+   G+EAGIKSATL I GP AYG+LKGE GVHRLVR+SP+D+N+
Sbjct: 148 YIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLKGETGVHRLVRLSPFDANN 207

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S++V P ++D ++I I+ESD +IDT+RA GAGGQHVNTTDSAVRITH+PTG+V
Sbjct: 208 KRHTSFASVFVLPEIEDDVDIVINESDLKIDTFRAGGAGGQHVNTTDSAVRITHLPTGIV 267

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ ERSQHKNKA A  +L++KLYELE++K+ +  N  ESSKTEI +G QIRSYVL PY
Sbjct: 268 VSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESSKTEINFGSQIRSYVLHPY 327

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +MVKDLRT  E  +P  VLDG+LDDF+++ L  K
Sbjct: 328 KMVKDLRTRHETGNPDAVLDGELDDFIRSYLFYK 361


>gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
 gi|238693208|sp|B4F0M7|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
          Length = 365

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 246/350 (70%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ +   L G  D+D   +RL  +N + E P +W    +A+ L +ER  L+  +  I +
Sbjct: 13  EVAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQ 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LL+LA+E DD     E    L+ +  ++E  +F  + SGE DS D YL++
Sbjct: 73  LEQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  AYGWL
Sbjct: 133 QAGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E 
Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 NKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|116051698|ref|YP_789463.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 332

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/326 (55%), Positives = 241/326 (73%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + EDP++W N   A+ L RER  L   +  + ++   L D+  LL++A+EEDD   +
Sbjct: 4   VNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGAV 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            + ++ ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RWA
Sbjct: 64  DDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +K  F    +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTS
Sbjct: 124 DKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ 
Sbjct: 184 FTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQN 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL   + +KD
Sbjct: 244 ERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVLDQSR-IKD 302

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT IE++    VLDGDLD++++A+L
Sbjct: 303 LRTGIERSDCDKVLDGDLDEYLEASL 328


>gi|71083436|ref|YP_266155.1| peptide chain release factor 2 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062549|gb|AAZ21552.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 284

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/278 (61%), Positives = 224/278 (80%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELALEE + S++ E  ++++ +K   +  + +  LS E DS D Y+E+HAGAGGTESQDW
Sbjct: 3   ELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLDCYIEIHAGAGGTESQDW 62

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY +W++ + FK+E +  H GEEAGIKS+T+ I+G   +GWLK E G+HRLVRI
Sbjct: 63  AEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLVRI 122

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS +RRHTSF+SIW+YPVVD++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 123 SPFDSGARRHTSFASIWIYPVVDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVRIT 182

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+P+ +VVQCQ ERSQHKNK    NML+A+LY+ EL+K+E+ +   ESSK+EIGWG QIR
Sbjct: 183 HLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQIR 242

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PY+MVKD RTN E ++P  VLDG++DDF++++L
Sbjct: 243 SYVLHPYRMVKDNRTNFESSNPDKVLDGEIDDFLESSL 280


>gi|262373739|ref|ZP_06067017.1| peptide chain release factor 2 [Acinetobacter junii SH205]
 gi|262311492|gb|EEY92578.1| peptide chain release factor 2 [Acinetobacter junii SH205]
          Length = 351

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/341 (51%), Positives = 241/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +  + EDP +W +   A+ + +E+  L+N +     + ++L D  
Sbjct: 8   GGIFDYDLKAERLEEVLRELEDPAIWNDQSRAQAIAKEKGSLENTLGVFDRLAEQLDDAK 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +L+LA+E DD S+L++    L   +  +   +F  + S   D N  +LE+ +G+GGTE+
Sbjct: 68  AMLDLAVEADDESLLEDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFLEIQSGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ + G  AYGWL+ E GVHRL
Sbjct: 128 QDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYGWLRTESGVHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+ RHTSFS+++V P +DD+IEI+I+ SD R DTYRASGAGGQH+N TDSAV
Sbjct: 188 VRKSPFDSNNNRHTSFSAVFVSPEIDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IGWG 
Sbjct: 248 RLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGS 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 308 QIRSYVLDDSR-IKDLRTGVENSNTKAVLDGDLDKFIEASL 347


>gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344]
 gi|226830773|ref|YP_001066897.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 1106a]
 gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|81604734|sp|Q62J00|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81607820|sp|Q63SP0|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576668|sp|A3NX26|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei ATCC 23344]
 gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106a]
          Length = 367

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 252/349 (72%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363


>gi|85712973|ref|ZP_01044012.1| Protein chain release factor B [Idiomarina baltica OS145]
 gi|85693211|gb|EAQ31170.1| Protein chain release factor B [Idiomarina baltica OS145]
          Length = 348

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/345 (53%), Positives = 245/345 (71%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  LGG+FD+ +  +RL  +  + E P +W +  +A+ L +ER  L+  I  +  ++  L
Sbjct: 1   MRHLGGIFDYAHKKERLEEVTRELEQPEVWDDPPKAQSLGKERAALEQVIETLDNLEQGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L++LA+E +D +   E    L+ +  ++E  +F  + S + DS+D Y+++ +G+G
Sbjct: 61  EDIEGLVDLAVEAEDETTFDEAEQELKELLTQLEALEFRRMFSRDNDSSDCYVDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWANMLLRMY RWAE  +FKTE  E+ +GE AGIKSAT+ I G  AYGWL+ E G
Sbjct: 121 GTEAQDWANMLLRMYLRWAEAHEFKTEITELSEGEVAGIKSATVRIAGEYAYGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S+++YP VDD IEIEI+ SD RIDTYRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFIYPEVDDDIEIEINPSDLRIDTYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PTG+VVQCQ +RSQHKNK  A   L+AKLYELE+QK+ E     E SK +I
Sbjct: 241 DSAVRITHEPTGIVVQCQSDRSQHKNKDSAMKQLKAKLYELEIQKQNEDKQALEDSKADI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT IE  +   VLDG LD F++A+L
Sbjct: 301 GWGSQIRSYVLDDAR-IKDLRTGIENRNTQAVLDGALDPFIEASL 344


>gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 357

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/342 (54%), Positives = 238/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + +++  L D 
Sbjct: 13  LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDV 72

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE
Sbjct: 73  SGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 132

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHR
Sbjct: 133 AQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 192

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 193 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 252

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 253 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 313 SQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 353


>gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
 gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
          Length = 351

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 245/343 (71%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL+ +  + E P +W++   A+ L +ER  L+  +S I  +   L D  
Sbjct: 8   GGIFDYDQRSERLTEVERELEMPSVWEDPERAQSLGKERSDLELIVSTIDRLTSGLTDAE 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLE+A+EEDD + + +  ++L  +   +E  +F  + SGE D N+AYL++ AG+GGTE+
Sbjct: 68  GLLEMAVEEDDEATVADIGNDLAEMDANLEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW NMLLRMY RWAE+R FK E +E+ +GE AGIKSATL I+G  A+GWL+ E GVHRL
Sbjct: 128 QDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGIKSATLHIQGDYAFGWLRTETGVHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSFSS++V P VDDS  IEI+ +D R+D YRASGAGGQHVN T+SAV
Sbjct: 188 VRKSPFDSGNRRHTSFSSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVNRTESAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q R       E SK++IGWG 
Sbjct: 248 RLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEHEMQARNAEKQKLEDSKSDIGWGS 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL   + +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 308 QIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
 gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
          Length = 417

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/341 (52%), Positives = 249/341 (73%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D+   RL  +N + EDP +W +   A+ L RE++ LD+ +  +  + + L D  
Sbjct: 74  GGIFDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDAQ 133

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ++A EEDD   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGGTE+
Sbjct: 134 DLFDMAREEDDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEA 193

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRL
Sbjct: 194 CDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRL 253

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 254 VRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAV 313

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ KT++GWG 
Sbjct: 314 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGH 373

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 374 QIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASL 413


>gi|297580789|ref|ZP_06942715.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
 gi|297535205|gb|EFH74040.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
          Length = 344

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/342 (53%), Positives = 246/342 (71%), Gaps = 3/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++ DR  D++
Sbjct: 1   GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL-DRGVDDV 59

Query: 71  -ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  +++++E  +F  + SG+ DS+D YL++ AG+GGTE
Sbjct: 60  EGLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTE 119

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHR
Sbjct: 120 AQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHR 179

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SA
Sbjct: 180 LVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESA 239

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG
Sbjct: 240 VRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 300 SQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 340


>gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus sp. MC-1]
 gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus sp.
           MC-1]
          Length = 379

 Score =  371 bits (953), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/350 (52%), Positives = 248/350 (70%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  L G  +++   +RLS L +  +DP+LW +   A+ +M E+  L+  I     +
Sbjct: 20  IGEKLTLLRGHLNYEQGKERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDAL 79

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   LLE+A EE D  ++ E +  +  I   +E  +   +LSGEAD+N+ ++E+H
Sbjct: 80  NSESTDARDLLEMAQEEGDSGMIAEVTAQVAAILKRLEGLELARMLSGEADANNCFIEIH 139

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++LLRMY R+ EK  FKTE ++   G+EAGIKS T+ ++G  AYG+LK
Sbjct: 140 PGAGGTESQDWASILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYLK 199

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS++RRHTSF+S+ VYP +DDSIEIEI + D R+DT+RASGAGGQH
Sbjct: 200 VESGVHRLVRISPFDSSARRHTSFTSVNVYPEIDDSIEIEILDKDLRVDTFRASGAGGQH 259

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH PTG+VVQCQ  RSQH+N+ +A  MLRA+L++LE+ KR E A     +
Sbjct: 260 VNKTDSAIRITHQPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVADA 319

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++I WG QIRSYVL PY++VKDLRT+ E  +   VLDG+LD F+KA L+
Sbjct: 320 KSDIAWGHQIRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALS 369


>gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
 gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
          Length = 349

 Score =  371 bits (952), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/342 (52%), Positives = 240/342 (70%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL  +   TEDP +W +   A+ L RER+ L++ +  I  I   + D+
Sbjct: 5   FGGIFDYDGKCDRLEEVVRLTEDPDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDS 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L ++A EE+D   +    D+L   + ++   +F  +     D N+ +L++ AGAGGTE
Sbjct: 65  RDLFDMAREENDADTILAVQDDLAEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTR+AE++ F+ E LE  +GE AGI SATL I G  AYG L+ E GVHR
Sbjct: 125 AQDWAGMLLRMYTRYAERKGFRVEILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR+SP+DSN+RRHTSFSS++VYP VDDS  IEI+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRVSPFDSNARRHTSFSSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTG+VVQCQ +RSQH+N+ +A  MLRAKLYELEL+KR E     E +KT++GWG
Sbjct: 245 VRITHNPTGIVVQCQNDRSQHRNRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV    + +KDLRT+ E  +   V+DGDLD F++ +L
Sbjct: 305 HQIRSYVFDQSR-IKDLRTSYEVGNIKSVMDGDLDGFIEESL 345


>gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
 gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
          Length = 365

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/349 (53%), Positives = 242/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I+++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIVDTIEQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA+EEDD     ET   L +++ ++   +F  + SGE DS D Y+++ 
Sbjct: 74  NQGLEDVTGLLDLAVEEDDEETFNETIIELDQLENKLGQLEFRRMFSGEYDSADCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ + G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE ELQK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361


>gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [marine bacterium HP15]
          Length = 351

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 244/343 (71%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +  + E P +W +   A+ L +ER  L+  +  I  +   L D  
Sbjct: 8   GGIFDYDQRSERLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTSGLEDAE 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL++A EE+D   + E   +L+ +  E+E  +F  + SGE D+N+AYL++ AG+GGTE+
Sbjct: 68  GLLDIAAEEEDEGTVAEIESDLEGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANMLLRMY RWAE+R FK E +E+ +GE AGIKSAT+ I+G  AYGWL+ E GVHRL
Sbjct: 128 QDWANMLLRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTETGVHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T+SAV
Sbjct: 188 VRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q+R       E +K +IGWG 
Sbjct: 248 RLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADIGWGS 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL   + +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 308 QIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
 gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
          Length = 367

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 249/342 (72%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G   +D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ + E+ + L D 
Sbjct: 23  LRGYLCYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTELDNDLRDA 82

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L ELA EE D   L  + ++  +++  V   +F  + S  AD N+ ++++ AGAGGTE
Sbjct: 83  LDLFELAREEGDEDTLIASEEDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTE 142

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+HR
Sbjct: 143 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHR 202

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 262

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+   +  ESSKT++GWG
Sbjct: 263 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLESSKTDVGWG 322

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 323 HQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363


>gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
 gi|238693117|sp|B4EDB1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
          Length = 367

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 249/342 (72%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G  D+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L D 
Sbjct: 23  LRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 82

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L ELA EE D   L  + ++  +++  V   +F  + S  AD N+ ++++ AGAGGTE
Sbjct: 83  LDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 142

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+HR
Sbjct: 143 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 202

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 262

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++GWG
Sbjct: 263 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 322

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 323 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 363


>gi|298500779|ref|ZP_07010582.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
 gi|297540560|gb|EFH76618.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
          Length = 344

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/342 (53%), Positives = 245/342 (71%), Gaps = 3/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++ DR  D++
Sbjct: 1   GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL-DRGVDDV 59

Query: 71  -ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+D YL++ AG+GGTE
Sbjct: 60  EGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTE 119

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHR
Sbjct: 120 AQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHR 179

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SA
Sbjct: 180 LVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESA 239

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG
Sbjct: 240 VRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 300 SQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 340


>gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
 gi|39984267|gb|AAR35654.1| peptide chain release factor 2, programmed frameshift [Geobacter
           sulfurreducens PCA]
 gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
          Length = 372

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/345 (53%), Positives = 243/345 (70%), Gaps = 6/345 (1%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G  D D+  + +  L  +   P  W N  EA+ ++RER  ++  I     +  +  D 
Sbjct: 19  LRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNRQADDI 78

Query: 70  LILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +L+EL  E  D + L E    +D+L+R   EVE  +F+ +LSG  D N  ++ ++AGAG
Sbjct: 79  RVLIELGEEAQDEATLDEVRALNDSLER---EVEGAEFQRMLSGPHDKNSCFVSINAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA MLLRMY R+ E++ +KTE  +   G+EAG+KSAT  + G  AYG+LK E G
Sbjct: 136 GTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+DSN+RRHTSF+S++V+P ++D IEI+I+ESD R+DTYR+SGAGGQHVNTT
Sbjct: 196 IHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ ERSQH NKA A  MLRAKLYE ELQ+RE  A+     K +I
Sbjct: 256 DSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDI 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL PY+MVKDLRT +E  +P  VLDG L+DF+ A L
Sbjct: 316 GWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFL 360


>gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
 gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
          Length = 349

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 242/342 (70%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD +   +RL  +N + E+P LW +   A  + +E+  LDN I  I  + D+L D 
Sbjct: 5   FGGIFDIEAKQERLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLEDA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +++LA+E DD ++L +    L   + +V   +F+ + SGE D N+ Y+++ +G+GGTE
Sbjct: 65  KAMIDLAVEADDATLLADVQAELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMY RW E   FK E +E+  G  AGIKSA++ +KG  A+GWL+ E GVHR
Sbjct: 125 AQDWAEMLLRMYLRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTG+VV CQ ERSQH NK  A  MLRAKLYE E+ +R E     E +K++IGWG
Sbjct: 245 VRITHQPTGIVVACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 305 SQIRSYVLDDSR-IKDLRTGVETSNTQAVLDGDLDKFIEASL 345


>gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 347

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/343 (52%), Positives = 241/343 (70%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D
Sbjct: 2   SLGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+E +D     E    L  ++ ++   +F  + SG+ D +D YL++ AG+GGT
Sbjct: 62  VEGLLELAVEAEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S +VYP VDD+I+I+I+ SD RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEVDDNIDIDINPSDLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPT  VVQCQ +RSQHKNK QA   L+AKL+ELE+QK+       E SK++IGW
Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 302 GSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 343


>gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5]
 gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5]
          Length = 337

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/324 (55%), Positives = 237/324 (73%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           T +P LW +   A+ L+RE+ +L+  ++   +++  L D L L E+A  E+D   L +  
Sbjct: 8   TANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDLETLSQIE 67

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+AE+  
Sbjct: 68  QDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLG 127

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRISP+++  +R TSF+S 
Sbjct: 128 FKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTSFASS 187

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ +RSQ
Sbjct: 188 WVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQ 247

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRSYVLQPYQMVKDLRT+
Sbjct: 248 HKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRSYVLQPYQMVKDLRTD 307

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +    VLDGDL++F+ A LA+
Sbjct: 308 YETSDTKGVLDGDLEEFVSANLAM 331


>gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
 gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
          Length = 365

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T   L +++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVAGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361


>gi|91762141|ref|ZP_01264106.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717943|gb|EAS84593.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 284

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/278 (60%), Positives = 224/278 (80%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELALEE + S++ E  ++++ +K   +  + +  LS E DS + Y+E+HAGAGGTESQDW
Sbjct: 3   ELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLNCYIEIHAGAGGTESQDW 62

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY +W++ + FK+E +  H GEEAGIKS+T+ I+G   +GWLK E G+HRLVRI
Sbjct: 63  AEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLVRI 122

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS +RRHTSF+SIW+YPV+D++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 123 SPFDSGARRHTSFASIWIYPVIDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVRIT 182

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+P+ +VVQCQ ERSQHKNK    NML+A+LY+ EL+K+E+ +   ESSK+EIGWG QIR
Sbjct: 183 HLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQIR 242

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PY+MVKD RTN E ++P  +LDG++DDF++++L
Sbjct: 243 SYVLHPYRMVKDNRTNFESSNPDKILDGEIDDFLESSL 280


>gi|307129433|ref|YP_003881449.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
 gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
          Length = 365

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T   L +++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVSGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361


>gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225944|sp|Q9ZDQ2|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii]
          Length = 369

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/352 (50%), Positives = 246/352 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ +    D +    RL+ L   T DP+LW N   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L + L L  +A  E+D   L +   + +++ +     + E L SGE D N+ +LE+
Sbjct: 71  LKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S W+YP +DD I I I + D RIDT+R+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR E  +   +
Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQ+VKDLRTN E +    VLDG+L+DF+ A+L++
Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSM 362


>gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum
           SCRI1043]
 gi|81646129|sp|Q6D946|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium
           atrosepticum SCRI1043]
          Length = 365

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LAERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     ETS  L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVTGLLELAVEEDDEDTFNETSAELDVLENKLGQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQVMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|70728519|ref|YP_258268.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           fluorescens Pf-5]
 gi|68342818|gb|AAY90424.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens
           Pf-5]
          Length = 364

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/349 (52%), Positives = 244/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D   +RL+ +N + EDP +W     A+ L RER  L   +  + E+
Sbjct: 13  LSERSETIRGYLDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A+EE+D   + +    L R++  +   +F  + S E D N+AYL++ 
Sbjct: 73  NGGLADCRDLLDMAVEEEDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +
Sbjct: 253 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D++++A+L
Sbjct: 313 KSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASL 360


>gi|15642771|ref|NP_230312.1| peptide chain release factor 2 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 365

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 247/350 (70%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL 73

Query: 63  QDRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            DR  D++  LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+D YL++
Sbjct: 74  -DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL
Sbjct: 133 QAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E 
Sbjct: 253 HVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 313 AKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 361


>gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix]
 gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
          Length = 364

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/343 (52%), Positives = 243/343 (70%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD+    +RL  +  + E+P +W +   A+ L +ER  L+N +  I+EI  +L D
Sbjct: 19  ALGGIFDYPVKEERLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREIGTQLDD 78

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  LLE+A  +DD         +++ +   VE  +F  + SG+ D  +AYL++ AG+GGT
Sbjct: 79  SRDLLEMAEADDDAETASAVEADVEALTARVEALEFRRMFSGDMDEANAYLDIQAGSGGT 138

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWAN+LLRMY RWAE   FKTE +E+ +GE AGIKSAT+ I+G  A+GWL+ E GVH
Sbjct: 139 EAQDWANILLRMYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLRTETGVH 198

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS +RRHTSF+S++  P VDDS EIEI+ +D R+DTYRASGAGGQHVN T+S
Sbjct: 199 RLVRKSPFDSGNRRHTSFASVFASPEVDDSFEIEINPADLRVDTYRASGAGGQHVNRTES 258

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH P+G+VV CQ +RSQHKN+  A   L+AKLYE+E+QKR       E +K++IGW
Sbjct: 259 AIRITHEPSGIVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDAKSDIGW 318

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 319 GSQIRSYVLDQSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASL 360


>gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
 gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
          Length = 367

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 251/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G   +D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363


>gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16]
 gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16]
          Length = 357

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/347 (51%), Positives = 251/347 (72%), Gaps = 1/347 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R+    GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ ++  +S + ++ D
Sbjct: 8   RERKIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTD 67

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L     L ELA EE D   L+    +++  +  V   +F  + SGE D  +A++++ AG
Sbjct: 68  DLSGAEELFELAREEGDDDTLEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAG 127

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E
Sbjct: 128 AGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTE 187

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N
Sbjct: 188 TGVHRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHIN 247

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT
Sbjct: 248 KTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKT 307

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 308 DVGWGHQIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353


>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
 gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
           degradans 2-40]
          Length = 347

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/343 (52%), Positives = 242/343 (70%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           CLGG+F++    +RL+ +  +  +P +W +   A+ L  ER  L+  +  I+ +++ + D
Sbjct: 2   CLGGIFEYAEKKERLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVAD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLE+A+EE D     E      R++  +   +F  + SGE D N+AYL++ AG+GGT
Sbjct: 62  CRELLEMAIEESDEDSFLEICSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA MLLRMY RW E + FKT   E   G+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWAEMLLRMYLRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS +RRHTSFSS++V P +DD+I+IEI+++D R DTYRASGAGGQHVN TDS
Sbjct: 182 RLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+VVQCQ ERSQH N+ +AW MLRA++YE E+QKR       E SK++IGW
Sbjct: 242 AVRLTHAPTGIVVQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   Q +KDLRTN++ ++ + VLDG LDDF+ A+L
Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCNAVLDGKLDDFIVASL 343


>gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45]
 gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45]
          Length = 397

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/351 (54%), Positives = 241/351 (68%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ LG   DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+     
Sbjct: 35  KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSS 94

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+E+   E+D  ++ E    L+ +  +   K+ E+LL GEAD ND +LE+
Sbjct: 95  IKQELSDNVELIEMGEMEEDDEVVSEAEAALRALAEKAGQKELEALLDGEADGNDTFLEI 154

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA ML RMY RWAEKR +  E      G EAG KS    I G NAYGWL
Sbjct: 155 NAGAGGTEACDWAAMLQRMYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWL 214

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+   + R TSF+S+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ
Sbjct: 215 KSESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 273

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT +VV    E+SQH+N+  A   L+++LY++EL KR    N    
Sbjct: 274 HVNTTDSAVRITHIPTNIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQHE 332

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA
Sbjct: 333 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLA 383


>gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
 gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
          Length = 365

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/349 (53%), Positives = 237/349 (67%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I E+
Sbjct: 14  LSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDEL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   LLELA+E DD     ET   L  +  ++E  +F  + SGE DS   YL++ 
Sbjct: 74  LQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSASCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD IEIEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIEIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ +RSQHKNK QA   +RAKLYE E+QK+       E +
Sbjct: 254 VNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNADKQQLEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813009|ref|YP_002897460.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|284159918|ref|YP_001059616.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 668]
 gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10229]
 gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10247]
 gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 668]
          Length = 367

 Score =  368 bits (944), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 251/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G   +D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363


>gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032]
 gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032]
          Length = 342

 Score =  368 bits (944), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/339 (53%), Positives = 237/339 (69%), Gaps = 1/339 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++   L D   L
Sbjct: 1   MFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LELA+E DD     E    L +++ ++   +F  + SGE DS D YL++ AG+GGTE+QD
Sbjct: 61  LELAVEADDEETFNEAVVELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  A+GWL+ E GVHRLVR
Sbjct: 121 WASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRI
Sbjct: 181 KSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QI
Sbjct: 241 THIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 301 RSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 338


>gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG
           19424]
          Length = 357

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 177/341 (51%), Positives = 248/341 (72%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +  + ++ D L    
Sbjct: 14  GGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLVGAE 73

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ELA EE D   L+    +++  +  V   +F  + SGE D  +A++++ AGAGGTE+
Sbjct: 74  ELFELAKEEGDDDTLESIEADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGGTEA 133

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GVHRL
Sbjct: 134 CDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRL 193

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP VDDS E+EI+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 194 VRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTDSAV 253

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++GWG 
Sbjct: 254 RITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWGH 313

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 314 QIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353


>gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
 gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
          Length = 351

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 185/345 (53%), Positives = 249/345 (72%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK ++  L
Sbjct: 4   LQCFGGIFDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+G
Sbjct: 64  EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 124 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 304 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347


>gi|311278189|ref|YP_003940420.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
 gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
          Length = 365

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 185/349 (53%), Positives = 240/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIP+G+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
 gi|81638630|sp|Q666T2|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
          Length = 366

 Score =  367 bits (943), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 185/341 (54%), Positives = 239/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I +++  L D  
Sbjct: 23  GYLFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVS 82

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++ AG+GGTE+
Sbjct: 83  GLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEA 142

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRL
Sbjct: 143 QDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRL 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 203 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG 
Sbjct: 263 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 322

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 323 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 362


>gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 337

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 175/331 (52%), Positives = 239/331 (72%), Gaps = 1/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL  +  + EDP +W +   A+ + +E+  L+N I+ +  +  +L D   +L+LA+E D
Sbjct: 4   ERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEAD 63

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+L++    L   + E+   +F  + S   D N  Y+E+ +G+GGTE+QDWA+MLLRM
Sbjct: 64  DESLLEDVQSELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRM 123

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RW E+  FK E +E+ DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +
Sbjct: 124 YMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 183

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR+THIPTG+V
Sbjct: 184 RRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 243

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ +RSQH N+  AW  LRA+LYELE+QKR E A   E SK++IGWG QIRSYVL   
Sbjct: 244 VACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS 303

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 304 R-IKDLRTGVENSNTGAVLDGDLDRFIEASL 333


>gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
 gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
          Length = 364

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 178/349 (51%), Positives = 245/349 (70%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  ++ + EDP +W +   A+ L +ER  L+  +  +  +
Sbjct: 13  LSERSQILRGYLDYDAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D+  LL++A+EEDD   ++     L  +  ++   +F  + SGE D+N A+L++ 
Sbjct: 73  ESGVEDSKDLLDMAVEEDDADSVEAVELELNDLDEQLAKLEFRRMFSGEMDANSAFLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANMLLRMY RW E + FK E +E+ +GE AGIKSAT+  +G  A+GWL+
Sbjct: 133 SGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFEGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S+++ P +DD++EI+I+ +D RIDTYR+SGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFLSPEIDDNVEIDINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VVQCQ +RSQH NK  A   LRAKLYELE+ KR E A   E +
Sbjct: 253 VNTTDSAVRITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKRTEAAQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E T+   VLDG LD F+ A+L
Sbjct: 313 KSDIGWGSQIRSYVLDSSR-IKDLRTGVESTNTGSVLDGSLDQFIVASL 360


>gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
 gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
          Length = 365

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 183/349 (52%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSTVLRGYLDYDAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D     E    L  +  ++   +F  + SGE DS D Y+++ 
Sbjct: 74  TQGLEDVSGLLELAVEAEDEDTFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E +
Sbjct: 254 VNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 361


>gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
 gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
          Length = 364

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 244/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   + G  D+D+   RL  +N + ED  +W     A+ L RER  L   +  + ++
Sbjct: 13  LTERSQSIRGYLDYDHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A+EE+D   + +    L+ ++ ++   +F  + SGE D N+AYL++ 
Sbjct: 73  SGGLADCQDLLDMAVEENDEGAVGDVVTELEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E S
Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 313 KSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 360


>gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073]
 gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739]
 gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469]
 gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88]
 gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a]
 gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989]
 gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39]
 gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026]
 gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|260857014|ref|YP_003230905.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|54039052|sp|P66024|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54039053|sp|P66025|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041596|sp|P66023|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040000|sp|B1ITB1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739125|sp|B7MM78|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739126|sp|B7NW32|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739128|sp|B7N7D5|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739129|sp|B1LR73|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739130|sp|B7LPA4|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790914|sp|B7UHU0|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790915|sp|B7LF76|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790916|sp|B7MZI9|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073]
 gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T]
 gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739]
 gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989]
 gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC
           35469]
 gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88]
 gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39]
 gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a]
 gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026]
 gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC
           H10407]
 gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)]
 gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11]
          Length = 365

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/349 (53%), Positives = 239/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
 gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
          Length = 347

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 183/341 (53%), Positives = 238/341 (69%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++   + D  
Sbjct: 4   GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+GGTE+
Sbjct: 64  GLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRL
Sbjct: 124 QDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 184 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG 
Sbjct: 244 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 304 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 343


>gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
 gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
          Length = 372

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 182/341 (53%), Positives = 234/341 (68%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD D   + L  LN + EDP LW    EA+ LM+E+  ++  +       + L D L
Sbjct: 23  GGHFDVDAREEELRELNARIEDPTLWDRPEEAQKLMQEKTRIERTLQTFHNSTEALDDAL 82

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+  EE D     E  + L  ++ E+E  +   +L GE D+  A+L+++AG+GGTE+
Sbjct: 83  TLFEMGAEESDPDTQMEAVETLDSVQAELEALELARMLGGETDAESAFLDINAGSGGTEA 142

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE++ FKTE +E   GEEAGIKSAT+ IKG  AYG+LK E GVHRL
Sbjct: 143 QDWAEMLLRMYLRWAERKGFKTELMECTAGEEAGIKSATVSIKGEYAYGFLKAEVGVHRL 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SPYDS +RRHTSF+S++ YP ++  IEI+I  SD R DTYRASGAGGQH+N TDSAV
Sbjct: 203 VRKSPYDSGNRRHTSFASVFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PT +VVQCQ +RSQHKN+A AW+ML+A+LYE EL  R       E  KT+IGWG 
Sbjct: 263 RLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKARLYEHELNLRNAEKQEIEDGKTDIGWGH 322

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +    LDGD+D F++A L
Sbjct: 323 QIRSYVLDQSR-IKDLRTGMETGNTQAFLDGDIDAFIQAEL 362


>gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1]
 gi|226739127|sp|B7LYF5|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1]
          Length = 365

 Score =  366 bits (940), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/349 (53%), Positives = 239/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92]
 gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM 10]
 gi|166977375|sp|A7FF38|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 365

 Score =  366 bits (940), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 186/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++ 
Sbjct: 74  EQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893]
 gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893]
          Length = 351

 Score =  366 bits (940), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 180/343 (52%), Positives = 243/343 (70%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL+ +  + E P +W++   A+ L +ER  L+  +  I  +   L D  
Sbjct: 8   GGIFDYDQRSERLTEVERELEVPSVWEDPERAQALGKERSDLELIVRTIDNLTSGLEDAE 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLE+A EE+D     E   +L  +  E+E  +F  + SGE D+N+AYL++ AG+GGTE+
Sbjct: 68  GLLEIADEEEDEGTAAEIEADLAGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW NMLLRMY RWAE+R FK E +E+ +G+ AGIKSAT+ I+G  A+GWL+ E GVHRL
Sbjct: 128 QDWGNMLLRMYLRWAERRGFKAEIVELQEGDVAGIKSATIHIQGDYAFGWLRTETGVHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T+SAV
Sbjct: 188 VRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q+R       E +K +IGWG 
Sbjct: 248 RLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADIGWGS 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL   + +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 308 QIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163]
 gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163]
          Length = 365

 Score =  366 bits (940), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 186/349 (53%), Positives = 240/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     ETS  L  ++ ++   +F  + SG+ DS D YL++ 
Sbjct: 74  AQGLEDVAGLLELAVEEDDEDTFNETSLELDVLENKLGQLEFRRMFSGQYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|308048394|ref|YP_003911960.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
 gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
          Length = 365

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 187/350 (53%), Positives = 246/350 (70%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  +N + E P +W     A+ L RER +L+  +  I +
Sbjct: 13  ELSERTELLRGYLDYDAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTIND 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL+LA+EE D    +E    L+ ++ ++E  +F  + SG  D+NDAYL++
Sbjct: 73  LDQGLEDVRELLDLAVEEQDEESFEEAKAELEGLEAQLEKLEFRRMFSGAQDANDAYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDW N+LLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G  A+GWL
Sbjct: 133 QAGSGGTEAQDWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRITH+PT  VVQCQ ERSQHKNK QA   L+AKL+ELE+QK+       E 
Sbjct: 253 HVNTTESAVRITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAEKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 AKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 361


>gi|78223569|ref|YP_385316.1| peptide chain release factor 2 [Geobacter metallireducens GS-15]
 gi|78194824|gb|ABB32591.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           metallireducens GS-15]
          Length = 364

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 190/357 (53%), Positives = 246/357 (68%), Gaps = 11/357 (3%)

Query: 1   MKLSRQLN-CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           MK+ R  +   GGLFD D+  + +  +      P  W +  +A+ L+RER  ++     I
Sbjct: 1   MKIFRSASPSSGGLFDIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEK----I 56

Query: 60  KEIQDRLC----DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
            E+ DRL     D  +L+EL  E  D   L E      +++ +VE  +F+ +LSG  D N
Sbjct: 57  LELWDRLTRQADDIRVLIELGEEAGDEGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKN 116

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             Y  ++AGAGGTE+QDWA MLLRMY R+ E++ +KTE  +   G+EAG+KSAT  + G 
Sbjct: 117 ACYFSINAGAGGTEAQDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGE 176

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E G+HRLVRISP+DSN+RRHTSF+S++ +P ++D IE+ I+E+D RIDTYR+
Sbjct: 177 YAYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFAFPEIEDDIEVTINEADLRIDTYRS 236

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-E 294
           SGAGGQHVNTTDSAVRITHIPTG+V   Q ERSQH NKA A  MLRAKLYE ELQ+RE +
Sbjct: 237 SGAGGQHVNTTDSAVRITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAK 296

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            A IG   K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDGDL++F+ A L
Sbjct: 297 AAEIG-GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFL 352


>gi|54307774|ref|YP_128794.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
 gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
          Length = 353

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 179/345 (51%), Positives = 240/345 (69%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG FD+D   ++L  +N + E P +W     A+ L + R  L+  +  I ++   +
Sbjct: 6   LTSLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EEDD     E    L  ++ ++   +F  + SGE DS+D Y+++ AG+G
Sbjct: 66  EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +M+LRMY RWA+ + FKTE +E+  G+ AG+KSAT+ + G  AYGWL+ E G
Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT
Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E SK++I
Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDI 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 306 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349


>gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 368

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 180/354 (50%), Positives = 240/354 (67%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + +  +L  +G   D     ++++ L  K  +P  W N  EA+ + +E   +  ++   K
Sbjct: 10  LAMQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYK 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           EI  +  D   LLE+ALEE+D S+  E     + IK  V   + E LLSG  D+N+A L 
Sbjct: 70  EIVSKTDDAQALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDANNAILT 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGGTE+QDW  MLLRMY RWAE+  F     ++  G+EAG+KSATL I G NAYG+
Sbjct: 130 LHAGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGY 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+DSN+RRHTSFS+  + P +DD++E+ I+ +D R+DTYRASGAGG
Sbjct: 190 LKSEKGVHRLVRISPFDSNARRHTSFSACDIMPEIDDAVEVAINMADVRVDTYRASGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q   MLRAKL+ELE +K+E      E
Sbjct: 250 QHINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLE 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + +I WG QIRSYV QPY MVKD+RT +E  +   V+DGDLD F++A LA K
Sbjct: 310 GDQQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 363


>gi|330814308|ref|YP_004358547.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487403|gb|AEA81808.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 312

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 173/308 (56%), Positives = 234/308 (75%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           M+++E+ HL+  ++  K  ++ L +   L+EL  +++D ++ +E   +L++++L++   +
Sbjct: 1   MVIKEKNHLERILNDYKSYKEELTNIKELVELNTKDNDENLTKELEMSLKKLELKIREIE 60

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               LS + D  D Y+E+HAGAGGTESQDWA ML  MY +WAEK+ F    +    GEE 
Sbjct: 61  LFCFLSKKNDELDVYVEIHAGAGGTESQDWAEMLRTMYIKWAEKKSFSFSLISETKGEEV 120

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G KS+T+ I+G  AYG+L+ E GVHRLVRISP+DS+ RRHTSF+S+WVYPVV++S+ ++I
Sbjct: 121 GFKSSTIKIEGKYAYGFLRHESGVHRLVRISPFDSDKRRHTSFASVWVYPVVNESVVVDI 180

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           ++ D RIDTYR+SGAGGQHVNTTDSAVRITH PT +VVQCQ ERSQHKNK  A NML+A+
Sbjct: 181 NDKDLRIDTYRSSGAGGQHVNTTDSAVRITHQPTNIVVQCQNERSQHKNKDTAMNMLKAR 240

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           LYELELQK++E +   ESSKT+IGWG QIRSYVLQPYQMVKD RT +E+T P  VLDG L
Sbjct: 241 LYELELQKKKEESKSVESSKTDIGWGHQIRSYVLQPYQMVKDSRTGLERTDPDKVLDGHL 300

Query: 344 DDFMKATL 351
           + F++ +L
Sbjct: 301 NPFLEESL 308


>gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160]
 gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160]
          Length = 384

 Score =  366 bits (939), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 177/341 (51%), Positives = 248/341 (72%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D+   RL  +N + EDP +W +   A+ L +E++ LD+ +  +  I + + D  
Sbjct: 41  GGIFDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVNDAQ 100

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGGTE+
Sbjct: 101 DLFEMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGGTEA 160

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIK+AT+ I+G  AYG+L+ E GVHRL
Sbjct: 161 CDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGVHRL 220

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 221 VRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAV 280

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG 
Sbjct: 281 RITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGH 340

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 341 QIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 380


>gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 347

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 177/343 (51%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D
Sbjct: 2   SLGGTFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+EE+D     E    L  ++ ++   +F  + +G+ D +D Y+++ AG+GGT
Sbjct: 62  VEGLLELAVEEEDQETFDEIEPELAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ + G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEIDDNIAIDINPSDLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E ELQK+       E SK++IGW
Sbjct: 242 AVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 302 GSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 343


>gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
 gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
          Length = 347

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 179/343 (52%), Positives = 243/343 (70%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD+D   +RL  +N + E P +W +   A+ L RER  L+  +  I ++      
Sbjct: 2   SLGGIFDYDAKKERLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEY 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+EE+D     E    L  ++ ++   +F  + SG+ D++D Y+++ AG+GGT
Sbjct: 62  ITELLELAVEENDQETFDEIEPELNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S ++YP VD++I+I+I+ +D RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIDINPADLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E++K++IGW
Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 302 GSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 343


>gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134]
 gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia
           eutropha JMP134]
          Length = 357

 Score =  366 bits (939), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 176/341 (51%), Positives = 249/341 (73%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +S + ++ D L    
Sbjct: 14  GGIFDYDVKVGRLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLNGAD 73

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ELA EE D   L+    +++  +  V   +F  + +GE D  +A++++ AGAGGTE+
Sbjct: 74  ELFELAKEEGDDETLESIETDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGGTEA 133

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GVHRL
Sbjct: 134 CDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRL 193

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 194 VRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAV 253

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++GWG 
Sbjct: 254 RITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWGH 313

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 314 QIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353


>gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT]
 gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus
           flagellatus KT]
          Length = 354

 Score =  365 bits (938), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 179/341 (52%), Positives = 245/341 (71%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   QRL  ++   EDP++W +   ++ L +ER+ L+  ++ + E+++ + D+ 
Sbjct: 11  GGIFDFDTKQQRLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLTEVENGVRDSR 70

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A EE+D   L+    + Q ++  V   +F  + S   D N+ +L++ AG+GGTE+
Sbjct: 71  ELFEMAREENDDDTLRSIDADTQALEKIVAEMEFRRMFSHPMDQNNCFLDIQAGSGGTEA 130

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY R+ E + FK E LE  +G+ AGIKSA+L I G  AYG+L+ E GVHRL
Sbjct: 131 QDWASMLLRMYLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGFLRTESGVHRL 190

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSF+S++VYP VDDSI +EI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 191 VRKSPFDSGNRRHTSFASVFVYPEVDDSIVVEINPADLRIDTYRASGAGGQHINKTDSAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQH+NK +A NML+A+LY LEL+KR E     E +KT+IGWG 
Sbjct: 251 RITHLPTNTVVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAMEDAKTDIGWGH 310

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E  +   VLDGDLD F+  +L
Sbjct: 311 QIRSYVLDQSR-IKDLRTNVEVGNTQGVLDGDLDPFISESL 350


>gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome
          Length = 365

 Score =  365 bits (938), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 239/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYE+E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
 gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
          Length = 365

 Score =  365 bits (938), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 185/349 (53%), Positives = 238/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVSGLLELAVEADDEETFNEAVAELDMLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1]
 gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp.
           CCS1]
          Length = 375

 Score =  365 bits (938), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 191/352 (54%), Positives = 243/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+   L  LG   D + A  RL   N + EDP+LW +  +A+ LMR+RQ L + +   + 
Sbjct: 11  KIRNSLTLLGQRMDIETAPHRLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYET 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN  L+EL   EDD  ++ E    L  +  E   K+ E+LL GEADSND +LE+
Sbjct: 71  IRQGVDDNAELIELGEMEDDAEVVAEAEAALTALVDEAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMYTRWAEK+ +  +      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDG++D  M + LA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTAFETSDTQGVLDGNIDGLMASVLAM 361


>gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
 gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
          Length = 365

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIVGTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     ET   L  ++ ++   +F  + SGE DS D Y+++ 
Sbjct: 74  YQGLEDVQGLLELAVEADDEETFNETIAELDGLETKLGELEFRRMFSGEYDSADCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  +GE AG+KSAT+ + G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAAEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 361


>gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585229|sp|C6D8Z5|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 365

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T+  L  ++ ++   +F  + SG+ DS D YL++ 
Sbjct: 74  TQGLEDVAGLLELAVEEDDEDTFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
 gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
          Length = 353

 Score =  365 bits (937), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 179/345 (51%), Positives = 240/345 (69%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG FD+D   ++L  +N + E P +W     A+ L + R  L+  +  I ++   +
Sbjct: 6   LTFLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EEDD     E    L  ++ ++   +F  + SGE DS+D Y+++ AG+G
Sbjct: 66  EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +M+LRMY RWA+ + FKTE +E+  G+ AG+KSAT+ + G  AYGWL+ E G
Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT
Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E SK++I
Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDI 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 306 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349


>gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
 gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
          Length = 351

 Score =  365 bits (937), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 184/345 (53%), Positives = 247/345 (71%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ IK ++  L
Sbjct: 4   LRCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+G
Sbjct: 64  EDVDGLLELAIEAEDEDTFHEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RW E + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 124 GTEAQDWTEMLLRMYLRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 304 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347


>gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 347

 Score =  365 bits (937), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 176/342 (51%), Positives = 246/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD++   QRL  ++   EDP +W +   ++ L +ER+ L+  +  + E+ + L D+
Sbjct: 3   FGGIFDFETKQQRLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDS 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE+D + L     + + ++ +VE  +F  + +   D N+ ++++ +G+GGTE
Sbjct: 63  AELFEMAREENDDATLLGIDADSKALEKQVEEMEFRRMFANPMDGNNCFIDIQSGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+MLLRMY R+ E+R FK E LE  +G+ AG+KSA+L I G  AYG+L+ E GVHR
Sbjct: 123 AQDWASMLLRMYLRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S+ V+P VDDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 183 LVRKSPFDSGNRRHTSFASVSVFPEVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQH+NKA+A NML+A+LY+LEL KR +     E +KT+IGWG
Sbjct: 243 VRITHLPTNTVVQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E  +   VLDGDLD F+  +L
Sbjct: 303 HQIRSYVLDQSR-IKDLRTNVEIGNTQGVLDGDLDPFISESL 343


>gi|307729220|ref|YP_003906444.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
 gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
          Length = 367

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 177/342 (51%), Positives = 248/342 (72%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G  D+D+  +RL  +N + EDP +W +   A+ L RE++ LD+ +  +  + + L D 
Sbjct: 23  LRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDT 82

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ AGAGGTE
Sbjct: 83  QDLFEMAREEGDDETLLACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTE 142

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHR
Sbjct: 143 ACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 202

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSA 262

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ KT++GWG
Sbjct: 263 VRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWG 322

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 323 HQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 363


>gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. W3110]
 gi|170082452|ref|YP_001731772.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238902016|ref|YP_002927812.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|2507293|sp|P07012|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576667|sp|B1XEH8|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|259585244|sp|C5A0G3|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12
           substr. W3110]
 gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1]
 gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1]
 gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2
          Length = 365

 Score =  365 bits (937), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
 gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
          Length = 365

 Score =  365 bits (936), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 187/349 (53%), Positives = 238/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVAGLLELAVEADDEETFNEAIAELDLLEDKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361


>gi|94309981|ref|YP_583191.1| peptide chain release factor 2 [Cupriavidus metallidurans CH34]
 gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
          Length = 357

 Score =  364 bits (935), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 247/341 (72%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +  + ++ D L    
Sbjct: 14  GGIFDYDVKVNRLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLNGTD 73

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ELA EE D   L+    ++   +  V   +F  + SGE D  +A++++ AGAGGTE+
Sbjct: 74  ELFELAREEGDDETLESIEADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGGTEA 133

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ ++G  A+G+L+ E GVHRL
Sbjct: 134 CDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGVHRL 193

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 194 VRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAV 253

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++GWG 
Sbjct: 254 RITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWGH 313

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 314 QIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353


>gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
 gi|238054482|sp|B5XUF3|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
          Length = 365

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 239/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  SQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37]
 gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37]
          Length = 374

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 186/353 (52%), Positives = 240/353 (67%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L     W+ A  RL   N + EDP+LW N   A+ LMR+RQ L +A+     
Sbjct: 11  KIEKSLDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDALESYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D + L+EL   E+D  ++ +    L+ +      K+ E+LL GE D NDA+LE+
Sbjct: 71  LKQELEDQVELIELGEMEEDAEVVADAEAALKALVETSAKKELEALLDGETDGNDAFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWANML RMY RWAEKR F+ +  E   G EAGIKSAT  IKG NAYGWL
Sbjct: 131 KAGAGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G HRLVRISP+   + R TSF+++  YPV+DD+IE+ ++ +D RIDT+R+SGAGGQ
Sbjct: 191 KSESGTHRLVRISPFGKGT-RETSFAAVGAYPVIDDNIEVTVNPADIRIDTFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 250 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHE 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT  E      VLDGDLD FM+ATLA++
Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLALQ 361


>gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli]
          Length = 365

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 183/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRVVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|33151768|ref|NP_873121.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
 gi|33147989|gb|AAP95510.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
          Length = 351

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 175/344 (50%), Positives = 240/344 (69%), Gaps = 1/344 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +  GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +   + 
Sbjct: 5   SSFGGIFDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIE 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L+ELA+E +D   L E       +  ++   +F+ + SG  D+ D YL++ AG+GG
Sbjct: 65  DVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQAGSGG 124

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+
Sbjct: 125 TEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGI 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQHVN T+
Sbjct: 185 HRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTE 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VVQCQ  RSQH+NK Q    LRAKLYE+E+ K+       E +K++IG
Sbjct: 245 SAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIG 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 305 WGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347


>gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661]
 gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661]
          Length = 348

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 183/341 (53%), Positives = 237/341 (69%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + +++  L D  
Sbjct: 5   GGIFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGLEDVR 64

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     ET   L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE+
Sbjct: 65  GLLELAVEADDEETFNETIAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSGGTEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMY RWAE + FKTE +E  +GE AG KSATL I G  A+GWL+ E GVHRL
Sbjct: 125 QDWAGMLVRMYLRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETGVHRL 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 185 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG 
Sbjct: 245 RITHLPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQSLEDNKSDIGWGS 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 305 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 344


>gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
          Length = 386

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 176/349 (50%), Positives = 251/349 (71%), Gaps = 2/349 (0%)

Query: 4   SRQLNCL-GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +R  N L GG+FD+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  +  +
Sbjct: 35  TRSANRLYGGIFDYDAKAERLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGL 94

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  L ELA  ++D + L+    +    + ++E  +F  + S  AD  + +L++ 
Sbjct: 95  GTGLADSNELFELAAADNDDATLESIELDANGFQEKLESLEFRRMFSNPADPLNCFLDIQ 154

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+
Sbjct: 155 AGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLR 214

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP VDDS E+E++ +D R+DTYRASGAGGQH
Sbjct: 215 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQH 274

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E S
Sbjct: 275 INKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDS 334

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 335 KTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 382


>gi|238897260|ref|YP_002922937.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465015|gb|ACQ66789.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 348

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 181/351 (51%), Positives = 245/351 (69%), Gaps = 7/351 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           MKLS      GG+FD+D   +RL  +N + E P +W+    A+ L +ER  L   +  + 
Sbjct: 1   MKLS------GGIFDYDEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLS 54

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +++  L D   LL+LA+E  D     E    L+ I  ++   +F  + SG+ D  D YL+
Sbjct: 55  QLEKELKDVSTLLDLAIEAQDRETFNEAVFELEAIDKKLNRLEFRRMFSGKNDFADCYLD 114

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +G+GGTE+QDWANMLLRMY RWA+ + FKTE +EI DGE AGIKSATL I G +A+GW
Sbjct: 115 LQSGSGGTEAQDWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGW 174

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVR SP+DS +RRHTSF+S +VYP ++D+I+I+I+ +D RID YRASGAGG
Sbjct: 175 LRTETGVHRLVRKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGG 234

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T+SAVRITH+PT +V QCQ +RSQHKNK QA+  L+AKLYE E+QK+     I E
Sbjct: 235 QHINKTESAVRITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIME 294

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +K++IGWG QIRSY+L   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 295 DNKSDIGWGSQIRSYILDDSR-IKDLRTGLETRNTQAVLDGYLDKFIEASL 344


>gi|172087665|ref|YP_203835.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
 gi|229576704|sp|Q5E7P9|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
          Length = 365

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 178/349 (51%), Positives = 242/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +
Sbjct: 14  VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LLELA+EE+D     E    L  ++ ++   +F  + SG+ D++D Y+++ 
Sbjct: 74  DQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASDCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K AT+ I G  AYGWL+
Sbjct: 134 SGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ SD RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPSDLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E ELQK+       E +
Sbjct: 254 VNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAEKQANEDA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 361


>gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225120|sp|A1JPL5|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 365

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 239/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIVTTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ 
Sbjct: 74  DQGMDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8]
 gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter
           aquaeolei VT8]
          Length = 310

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 175/309 (56%), Positives = 230/309 (74%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  I  + + L D   LL++A+EEDD   +QE   +L+ +  E+E  +F
Sbjct: 1   MGKERSDLELIVKTIDNLTNGLADAESLLDMAVEEDDEGTVQEIEADLENLDKELEKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE D+N+AYL++ AG+GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AG
Sbjct: 61  RRMFSGEMDANNAYLDIQAGSGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ I+G  AYGWL+ E GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+
Sbjct: 121 IKSATIHIQGDYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D R+D YRASGAGGQHVN T+SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL
Sbjct: 181 PADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +ELE+QKR E     E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGD+D
Sbjct: 241 FELEMQKRNEEKQKAEDSKSDIGWGSQIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDID 299

Query: 345 DFMKATLAI 353
            F++A+L +
Sbjct: 300 KFIEASLKM 308


>gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
 gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
          Length = 367

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 248/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS + N L    D+D   +RL+ +    EDP +WQ+   A+ L RER+ L++ +  + +I
Sbjct: 16  LSLRSNELRRYLDYDTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  L D   L E++ EE+D + L  T+ ++  I+  V   +F  + +   D N  ++++ 
Sbjct: 76  QQDLTDAAELFEMSQEENDEASLMSTAADIDDIERRVAEMEFRRMFNHPMDPNSCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY R+AE++ ++ E LEI DG+ AGIK A++ + G  A+G L+
Sbjct: 136 AGSGGTEAQDWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPT +VVQCQ +RSQH+N+A+A  ML++++YE EL+KR E     E  
Sbjct: 256 INKTDSAVRITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT+IGWG QIRSYVL   + +KDLRTN E  +   VLDGDLDDF+ A+L
Sbjct: 316 KTDIGWGHQIRSYVLDQSR-IKDLRTNHEVGNTQGVLDGDLDDFISASL 363


>gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 EDL933]
 gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 365

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTS SS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSXSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|24638154|sp|Q8ZHK4|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92]
          Length = 366

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 184/341 (53%), Positives = 238/341 (69%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G L D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I +++  L D  
Sbjct: 23  GYLCDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVS 82

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++ AG+GGTE+
Sbjct: 83  GLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEA 142

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRL
Sbjct: 143 QDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRL 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 203 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG 
Sbjct: 263 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 322

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 323 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 362


>gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001]
 gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001]
          Length = 367

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 176/342 (51%), Positives = 247/342 (72%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G  D+D+  +RL  +N + EDP +W +   A+ L RE++ LD+ +  +  + + L D 
Sbjct: 23  LRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLHNDLRDA 82

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ AGAGGTE
Sbjct: 83  QDLFEMAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTE 142

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHR
Sbjct: 143 ACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 202

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSA 262

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG
Sbjct: 263 VRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWG 322

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 323 HQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 363


>gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
 gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
          Length = 359

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 171/341 (50%), Positives = 249/341 (73%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL  +N + EDP++W +   A+ L +E++ L+  +  +  + + L D  
Sbjct: 16  GGIFDYDAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGVVDVLSSLDNDLRDTK 75

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ++A EE+D   L    +++ ++   VE  +F  + S  AD N+A++++ AGAGGTE+
Sbjct: 76  DLFDMAREENDEDTLVACEEDVAKLTTRVEDMEFRRMFSNPADPNNAFIDIQAGAGGTEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIKSAT+ ++G  AYG+L+ E G+HRL
Sbjct: 136 CDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGEYAYGFLRTETGIHRL 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP +D+S EIE++ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 196 VRKSPFDSSGGRHTSFSSVFVYPEIDESFEIEVNPADLRIDTYRASGAGGQHINKTDSAV 255

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ K+++GWG 
Sbjct: 256 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQSEQDKLEAGKSDVGWGH 315

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 316 QIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDAFISASL 355


>gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
 gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
          Length = 344

 Score =  363 bits (932), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 178/340 (52%), Positives = 242/340 (71%), Gaps = 1/340 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G+FD+D   +RL  ++ + E P +W     A+ L +ER  L+  +  I++++ +L D   
Sbjct: 2   GIFDYDVKQERLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNG 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LL+LA+EE+D +   E    L+ ++  +   +F  + SGE DS + YL++ AG+GGTE+Q
Sbjct: 62  LLDLAVEENDEATFNEVLAELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANMLLRMY RWA+ + F+TE ++  DG+ AG+KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 122 DWANMLLRMYLRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP +DD + IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 182 RKSPFDSGGRRHTSFSSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG Q
Sbjct: 242 ITHIPTNIVTQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRTN+E  +   VLDGDLD F++A+L
Sbjct: 302 IRSYVLDDAR-IKDLRTNVETRNTQAVLDGDLDKFIEASL 340


>gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63255265|gb|AAY36361.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 329

 Score =  363 bits (931), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 175/326 (53%), Positives = 237/326 (72%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + EDP++W N   A+ L RER  L   +  + E+   L D   LL ++ EE+D + +
Sbjct: 1   MNRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEEDQAAV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            + +  ++R++  +E  +F  + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA
Sbjct: 61  DDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTS
Sbjct: 121 DKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS+++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ 
Sbjct: 181 FSAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++IGWG QIRSYVL   + +KD
Sbjct: 241 ERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRSYVLDASR-IKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRTNIE++    VLDGD+D+++ A+L
Sbjct: 300 LRTNIERSDCDKVLDGDIDEYLIASL 325


>gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
 gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
          Length = 353

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 239/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +   + D 
Sbjct: 9   LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDV 68

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     E    L  ++ ++   +F  + +G+ D++D YL++ AG+GGTE
Sbjct: 69  EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G  AYGWL+ E GVHR
Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA
Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E +K++IGWG
Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 309 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349


>gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Vibrio angustum S14]
 gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum
           S14]
          Length = 353

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 239/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +   + D 
Sbjct: 9   LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDV 68

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     E    L  ++ ++   +F  + +G+ D++D YL++ AG+GGTE
Sbjct: 69  EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G  AYGWL+ E GVHR
Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA
Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E +K++IGWG
Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 309 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349


>gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1]
 gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1]
 gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1]
 gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8]
 gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7]
 gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1]
 gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E]
          Length = 349

 Score =  363 bits (931), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 246/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD ++  +RL  +N + E+P +W N   A  + +E+  LD  +  I  +  +L D 
Sbjct: 5   FGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +LELA+E+DD S+L +    L      VE  +F  + SGE D+N+ YL++ +G+GGTE
Sbjct: 65  AAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT+++KG  A+GWL+ E GVHR
Sbjct: 125 AQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRIDTYRSSGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QKR E     E SK++IGWG
Sbjct: 245 VRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E ++ + VL+GDLD F++A+L
Sbjct: 305 SQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKFIEASL 345


>gi|51473471|ref|YP_067228.1| peptide chain release factor 2 [Rickettsia typhi str. Wilmington]
 gi|51459783|gb|AAU03746.1| peptide chain release factor 2 (RF-2) [Rickettsia typhi str.
           Wilmington]
          Length = 340

 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 173/332 (52%), Positives = 236/332 (71%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ L   T DP LW N   A++L+RE+ +++  ++    ++    D L L  +A  E+D
Sbjct: 2   RLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEAMAEVEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L +   + +++ +     + E L S E+D N+ +LE++AGAGGTES DWA++++RMY
Sbjct: 62  FETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDWASIMMRMY 121

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW K E GVHRLVRISP+++  +
Sbjct: 122 LRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 181

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPT  V 
Sbjct: 182 RMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTNTVT 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR +  +   ++KT+  WG QIRSYVLQPYQ
Sbjct: 242 QCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIRSYVLQPYQ 301

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +VKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 302 IVKDLRTDYETSDTKGVLDGNLENFVSASLAM 333


>gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS]
 gi|166977373|sp|A8A432|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS]
          Length = 365

 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G   +D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLCYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1]
          Length = 347

 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 245/343 (71%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  +  IK ++  L D
Sbjct: 2   CFGGIFDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+E +D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+GGT
Sbjct: 62  VEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+H
Sbjct: 122 EAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+S
Sbjct: 182 RLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++IGW
Sbjct: 242 AVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 302 GSQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 343


>gi|262277365|ref|ZP_06055158.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
 gi|262224468|gb|EEY74927.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
          Length = 248

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 167/244 (68%), Positives = 202/244 (82%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           +SG+AD  D YLEVHAGAGGTESQDWA+M+ +MY +W+EK     E +    GEEAGIKS
Sbjct: 1   MSGDADKFDCYLEVHAGAGGTESQDWADMIRKMYLKWSEKTDRSCELISESKGEEAGIKS 60

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           +T+ I G N++G+LK E GVHRLVRISP+DSN RRHTSF+S+WVYPV+DD IEIEI E D
Sbjct: 61  STIKIGGLNSFGYLKNESGVHRLVRISPFDSNQRRHTSFASVWVYPVIDDKIEIEIKEKD 120

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+DTYR+SGAGGQHVNTTDSAVRITH+PT +VVQCQ ERSQHKNK  A  ML+++LYEL
Sbjct: 121 LRVDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVQCQNERSQHKNKDTAMKMLKSRLYEL 180

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           EL+KREE A   E SKT+IGWG QIRSYVLQPYQ+VKD RTN+E TSP DVL+G++ +F+
Sbjct: 181 ELKKREESAQSAEDSKTDIGWGHQIRSYVLQPYQLVKDNRTNVESTSPDDVLNGEIGEFL 240

Query: 348 KATL 351
           ++ L
Sbjct: 241 ESAL 244


>gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
 gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
          Length = 337

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 174/331 (52%), Positives = 236/331 (71%), Gaps = 1/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL  +  + EDP +W +   A+ + +E+  L+N ++ +  + ++L D   +L+LA+E D
Sbjct: 4   ERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVEAD 63

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+L +    L   + E+   +F  + S   D N  Y+E+ AG+GGTE+QDWA+MLLRM
Sbjct: 64  DESLLVDVESELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRM 123

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RW E+  FK E +E  DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +
Sbjct: 124 YMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 183

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFS+++V P +DD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+TH PTG+V
Sbjct: 184 RRHTSFSAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIV 243

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IGWG QIRSYVL   
Sbjct: 244 VACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS 303

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 304 R-IKDLRTGVENSNTGAVLDGDLDKFIEASL 333


>gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002]
 gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
          Length = 367

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 176/349 (50%), Positives = 250/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++ + L G  D+D+   RL  +N + EDP +W +   A+ L +E++ LD+ +  +  I
Sbjct: 16  LRKRADDLRGYLDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + D   L ++A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ 
Sbjct: 76  TNDVNDAQDLFDMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIK+AT+ I+G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ 
Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 316 KTDVGWGHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 363


>gi|147732321|sp|Q68X96|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 174/340 (51%), Positives = 239/340 (70%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D ++   RL+ L   T DP LW N   A++L+RE+ +++  ++    ++    D L L 
Sbjct: 23  LDIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELE 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            +A  E+D   L +   + +++ +     + E L S E+D N+ +LE++AGAGGTES DW
Sbjct: 83  AMAEVENDFETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A++++RMY R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW K E GVHRLVRI
Sbjct: 143 ASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++  +R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRIT
Sbjct: 203 SPFNAAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPT  V QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR +  +   ++KT+  WG QIR
Sbjct: 263 HIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVLQPYQ+VKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 323 SYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAM 362


>gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
 gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
          Length = 347

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 177/341 (51%), Positives = 244/341 (71%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL+ L  ++EDP +W +   A+ + RE++ L+N +  ++ +  +L D  
Sbjct: 4   GGIFDFDAKQIRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTH 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL++A EE+D   LQ  +D++  +   +   +F  + S   D N+ ++++ +G+GGTE+
Sbjct: 64  ELLQIAQEENDKETLQSIADDVTELDQTLAGMEFRRMFSDPMDPNNCFVDIQSGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML RMY R+ E+R    E LE   G+ AGIKSATL I G  AYG+L+ E GVHRL
Sbjct: 124 QDWASMLERMYLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DT+RASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VVQCQ  RSQH+N+A A  +L+++LYE EL+KR E     E SKT+I WG 
Sbjct: 244 RITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTNIE  +   VLDGDLD F++A+L
Sbjct: 304 QIRSYVLDQSR-IKDLRTNIEIGNTQAVLDGDLDTFIEASL 343


>gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 358

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 187/342 (54%), Positives = 239/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++   L D 
Sbjct: 14  LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDV 73

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE
Sbjct: 74  SGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 133

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHR
Sbjct: 134 AQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 194 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 254 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 SQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 354


>gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
 gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
          Length = 365

 Score =  362 bits (929), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 239/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L G  D+    +RL  +  +   P +W     A+ L +ER  L   +  +  +
Sbjct: 14  LKGRLEALRGYLDFAAKQERLVEVERELAIPSVWNEPERAQRLGQERAQLQAVVGPLAAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + +     L ELA+EE D    +E S  L+ ++  +E  +F+ + +GE D N+AYL++ 
Sbjct: 74  GEEIGQIKELFELAVEEGDEDTAREVSAELETMEQRLEKLEFQRMFAGEMDPNNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RW EK  FKTE  E+  GE AGIKSAT+  +G  A+GWL+
Sbjct: 134 AGSGGTEAQDWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRFEGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP VD+ I+IEI+ +D RIDTYRA+GAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRAAGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+P+ +VVQCQ ERSQH+NKA     LRAKLYELE++KR+      E +
Sbjct: 254 VNRTDSAVRITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRKRQAEKQAAEEA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KADIGWGSQIRSYVLDQSR-IKDLRTGVEMGNTQAVLDGDLDLFIEASL 361


>gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
 gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
          Length = 347

 Score =  362 bits (929), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 173/343 (50%), Positives = 243/343 (70%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           CLGG+FD+D   ++L+ +  +  +P +W +   A+ L +ER  L+  +  I+ +   + D
Sbjct: 2   CLGGIFDYDAKQEQLAEVELELAEPEVWNDPARAQALGQERASLEAIVGTIQTLDTGVVD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LL++A+EE D SIL +  D +  +  ++   +F  + SGE D+N+AYL++ +G+GGT
Sbjct: 62  ARELLDMAVEEGDESILIDVQDEIDVLSAQLGKLEFRRMFSGETDANNAYLDIQSGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA M+LRMY RW E R FKT   E   G+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWAEMVLRMYLRWGEARGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS+SRRHTSF S++V P +DD+ E+++ +S+ R DTYRASGAGGQHVN TDS
Sbjct: 182 RLVRKSPFDSSSRRHTSFCSVFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH  +G+VVQCQ +RSQH+N+  AW MLRA+LYE ELQ+R       E +K++IGW
Sbjct: 242 AVRLTHEASGIVVQCQSQRSQHQNRDTAWKMLRARLYEQELQRRNADKQAQEDNKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   Q +KDLRTN++ ++   VLDG LD F++A+L
Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCQAVLDGSLDQFIEASL 343


>gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91]
 gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas
           eutropha C91]
          Length = 348

 Score =  362 bits (929), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 178/345 (51%), Positives = 243/345 (70%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D    RL+ L  ++EDP +W +   A+ L RE++ L+N +  ++ I  +L
Sbjct: 1   MKFYGGIFDFDAKQVRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LL++A EE D   L   S+++  +   VE  +F  + S   D N+ ++++ +G+G
Sbjct: 61  QDAQELLQIAQEESDDETLHSISEDVAGLAKTVEEMEFHRMFSDPMDPNNCFIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+ML RMY  + E+R    E LE   G+ AGIKSAT+ + G  AYG+L+ E G
Sbjct: 121 GTEAQDWASMLERMYLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N T
Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+VVQCQ  RSQH+N+A A  +L+++LYE EL+KR E     E SKT+I
Sbjct: 241 DSAVRITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYVL   + +KDLRTNIE  +   VLDGDLD F++A+L
Sbjct: 301 AWGHQIRSYVLDQSR-IKDLRTNIEVGNTQAVLDGDLDVFIEASL 344


>gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 330

 Score =  362 bits (928), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 175/323 (54%), Positives = 227/323 (70%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  EA+ + +E   +  ++   KEI  +  D   LLE+ALEE+D S+  E    
Sbjct: 3   EPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQTE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + IK  V   + E LLSG  D+N+A L +HAGAGGTE+QDW  MLLRMY RWAE+  F 
Sbjct: 63  FETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFS 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
               ++  G+EAG+KSATL I G NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+  +
Sbjct: 123 VVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSACDI 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD++E+ I+ +D R+DTYRASGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ +
Sbjct: 183 MPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ Q   MLRAKL+ELE +K+E      E  + +I WG QIRSYV QPY MVKD+RT +E
Sbjct: 243 NREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTGME 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDLD F++A LA K
Sbjct: 303 TGNVQAVMDGDLDAFIEAFLAAK 325


>gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli]
          Length = 365

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 236/349 (67%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRXVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK Q    ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera sp. 301]
 gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera sp. 301]
          Length = 351

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 174/343 (50%), Positives = 242/343 (70%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD++   QRL  +N   EDP +W +  +++ L +E++ L+  +  ++ ++  L D
Sbjct: 6   TLGGIFDFETKSQRLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLND 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  L E+A EE+D   L     + Q ++ +V   +F  + SGE DSN+ ++E  +G+GGT
Sbjct: 66  SRELFEMAREENDDDTLLSVDVDSQAVEKQVAEMEFRRMFSGELDSNNCFIEFQSGSGGT 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA MLLRMY R+ E++ FK E LE  DG+ AGIK A++ + G  AYG L+ E GVH
Sbjct: 126 EAQDWAAMLLRMYLRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DSN++RHTSF+S+ ++P VDDSI+I+I+ +D RIDTYRASGAGGQH+N TDS
Sbjct: 186 RLVRKSPFDSNAKRHTSFASVQIFPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT  VVQCQ +RSQH+N+ +A NML+  LY LEL KR       E +KT+IGW
Sbjct: 246 AVRITHLPTNTVVQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIGW 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRTN+E  +   VLDGDLD F++ +L
Sbjct: 306 GHQIRSYVLDQGR-IKDLRTNVEIGNTQGVLDGDLDPFIQVSL 347


>gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21]
 gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 371

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 176/347 (50%), Positives = 242/347 (69%), Gaps = 1/347 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +++ L G  + D+  +R+  L   T  P  W +   A+ ++R R  ++  ++  + 
Sbjct: 11  ELAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL  EE D + L E +    +++  V   +F  +LSG  D++ A++ +
Sbjct: 71  LDKQARDIQELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA MLLRMY R+ EK+ +KTE  +  +G+ AG+K  T  + G  AYG+L
Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGG 240
           K E G+HRLVRISP+DS++RRHTSF+S +V+PV++ D IEI+I+ESD RIDTYR+SGAGG
Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+   
Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             K EIGWG QIRSYVL PY+MVKDLRT +E   P  VLDG LDDF+
Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFV 357


>gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1]
 gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 337

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 174/331 (52%), Positives = 241/331 (72%), Gaps = 1/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++L  +N + EDP++W +   A+ L +E++ L+  +  + +I   L D   L E+A EE 
Sbjct: 4   EKLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMAREEK 63

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D   +     + + +K  VE  +F  + SG  D+N+ ++++ AGAGGTE+QDWA+MLLR 
Sbjct: 64  DEDTIIAIEGDAENLKKMVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQ 123

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+ E++ FK E LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHRLVR SP+DS++
Sbjct: 124 YLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDSSN 183

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
            RHTSFSS++VYP VD+S EIEI+ +D R+DTYRASGAGGQH+N TDSAVR+TH P+G+V
Sbjct: 184 GRHTSFSSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 243

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ +RSQH+N+A+AW+MLRAKL+ELEL+KR       E SKT++GWG QIRSYVL   
Sbjct: 244 VQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDQS 303

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +KDLRTN E  +   VLDGD+DDF+ A+L
Sbjct: 304 R-IKDLRTNFETGNTKAVLDGDIDDFIAASL 333


>gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
 gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
          Length = 367

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 177/352 (50%), Positives = 242/352 (68%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + + D+  +RL  +N        W +  +A  + +E++  +  +S   E+
Sbjct: 13  LQNKAQNIAKILNPDSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L E+A  E D S L+   +N++ ++  ++  + E +LSGE DS +A + + 
Sbjct: 73  KAELDDARELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSTNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RW+E+R FK E L+  DGEEAGIK A  +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGES 301
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELE L++ E +AN   +
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVAN---A 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K+EIGWG QIRSYVL PYQ VKDLR+N   +    VLDGD+DD +++ L +
Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVLVL 361


>gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 347

 Score =  360 bits (925), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 173/345 (50%), Positives = 243/345 (70%), Gaps = 2/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++C GG+FD+D    +L  +  + EDP +W N   A+ L RER+ L+N +  +  + D L
Sbjct: 1   MSC-GGIFDYDQKADQLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSL 59

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L  +A EEDD   L   + ++  I+ EV   +F  + +  AD  + ++++ AGAG
Sbjct: 60  RDTGELFAMAREEDDDETLNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA MLLRMY R+AE++ +  E LE  +GE AGIK+A++ I G  AYG L+ E G
Sbjct: 120 GTEAQDWAAMLLRMYLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSF S+  YP +DDS E+EI+ ++ RIDTYRASGAGGQH+N T
Sbjct: 180 IHRLVRKSPFDSNARRHTSFCSVSAYPEIDDSFEVEINPAELRIDTYRASGAGGQHINKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PT +VVQCQ +RSQH+N+A+A  ML++++YE E++KR+      E +K++I
Sbjct: 240 DSAVRITHLPTNIVVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDI 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRTN+E  +   VLDGDLD F++A+L
Sbjct: 300 GWGHQIRSYVLDQSR-IKDLRTNVEVGNTQGVLDGDLDQFIEASL 343


>gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1]
 gi|81598559|sp|Q5NZU2|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed
           frameshift site [Aromatoleum aromaticum EbN1]
          Length = 367

 Score =  360 bits (925), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 177/338 (52%), Positives = 238/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D    +L  +    EDP +W N  +A+ L +E++ L++ +  +++I+    D   L 
Sbjct: 27  LDYDEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLEDVVHNLRDIESLSSDLKDLF 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA  EDD   L     ++  ++ +V   +F  + S   D N  ++E+ AGAGGTE+QDW
Sbjct: 87  DLAEAEDDEDTLAAVEADIGELQAKVHALEFRRMFSNPMDPNPCFIEIQAGAGGTEAQDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY R+ E++ F  E +E  +GE AGIK AT+ + G  AYG+L+ E G+HRLVR 
Sbjct: 147 AGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVSGDYAYGFLRTETGIHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSFSS++VYP VDDSI+I+I+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSNARRHTSFSSVFVYPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTGVVVQCQ +RSQHKNKA+A +ML+A+LYELEL+KR+      E SK++IGWG QIR
Sbjct: 267 HEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQSEQQKLEDSKSDIGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN E  +   VLDGDLDDF+ A+L
Sbjct: 327 SYVLDQSR-IKDLRTNFEVGNTQAVLDGDLDDFIAASL 363


>gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1]
 gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp.
           PRwf-1]
          Length = 325

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 172/319 (53%), Positives = 227/319 (71%), Gaps = 1/319 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P LW +   A  + +E+  LD  I+ I  +   L D   +LELA+E DD  +L+E  + L
Sbjct: 4   PELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQNEL 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
              +  VE  +F+ +  GE D+N+ ++++ +G+GGTE+QDWA MLLRMYTRW E   FK 
Sbjct: 64  NAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E +E+  G  AG+KSA+  + G  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V 
Sbjct: 124 EIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAVFVS 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD  EI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PTG VVQCQ ERSQH N
Sbjct: 184 PEIDDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQNERSQHGN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           KA A  MLRAKLYELE+QKR E     E +K+++GWG QIRSYVL   + +KDLRT +E 
Sbjct: 244 KATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWGSQIRSYVLDDSR-IKDLRTGVET 302

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   VLDGDLD F++A+L
Sbjct: 303 FNTGAVLDGDLDQFIEASL 321


>gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
 gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
          Length = 365

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 175/349 (50%), Positives = 246/349 (70%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  ++ + E P +W +   A+ L +ER  L+  +  +  +
Sbjct: 14  LSARAAALRGYLDFDVKKERLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  LLE+A EEDD + +     ++   + ++   +F  + SGE D ++AYL++ 
Sbjct: 74  AQGLNDNADLLEMAAEEDDEATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA++L+RMY RW ++R FKTE +E+ DGE AGIKSAT+  +G  A+GWL+
Sbjct: 134 SGAGGTESQDWASILMRMYLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEIE++ +D R+D +RASGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFASVFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR TH+PTGVVV CQ ERSQ +N+ +A  ML+AKLYELE+QKR  ++   E +
Sbjct: 254 VNRTESAVRFTHLPTGVVVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+++ WG QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 314 KSDVSWGNQIRSYVLDQSR-IKDLRTGHETGNTQAVLDGDLDPFIEASL 361


>gi|157827015|ref|YP_001496079.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
 gi|157802319|gb|ABV79042.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
          Length = 285

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 171/279 (61%), Positives = 215/279 (77%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D  I+Q+   +LQ +       + E L SGEADSN+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGWLK E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWLKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A+LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 279


>gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|123585257|sp|Q3BUB7|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 374

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 245/349 (70%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G+FD+D   +RL  ++ + E P +W +   A+ L RER  L+  +  I ++
Sbjct: 14  LNDRVLSLRGIFDYDAKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA  E D         +L   +  VE  +F+ + SG+ DS +A++++ 
Sbjct: 74  LSGLADAGDLLELAESEQDEDTALAVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ I+G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361


>gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T]
 gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 367

 Score =  360 bits (923), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 178/338 (52%), Positives = 237/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D    +L  +N   EDP +W N   A+ L +E++ L++ +  +++I  +  D   L 
Sbjct: 27  LDYDVKASKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQKIDAQSRDLKDLF 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  EDD    +    +L  ++  +E  +F  + S   D N+ ++E+ AGAGGTE+QDW
Sbjct: 87  ELAEAEDDDDTFEAVEADLVELQGAIEKLEFRRMFSNPMDPNNCFIEIQAGAGGTEAQDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY R+ EK+ F  E +E  +GE AGIK+ T+   G  AYG+L+ E G+HRLVR 
Sbjct: 147 AGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYGYLRTETGIHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQHKNKA+A +ML+A+LYE EL+KR+      E SK++IGWG QIR
Sbjct: 267 HEPTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQKLEDSKSDIGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN E  +   VLDGDLDDF+ A+L
Sbjct: 327 SYVLDQSR-IKDLRTNYEVGNTQAVLDGDLDDFIGASL 363


>gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N]
 gi|123515203|sp|Q2L224|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N]
          Length = 367

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+   + D L L 
Sbjct: 27  LDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLTELGQGVADALELF 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA  ++D + L+   ++    +  +E  +F  + S  AD  + +L++ AGAGGTE+QDW
Sbjct: 87  ELAAADEDDATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFGYLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++KR       E SKT++GWG QIR
Sbjct: 267 HMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363


>gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
 gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 178/341 (52%), Positives = 240/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL+ +N+  E P +W +   A  L +E++ LDN +  I+++   L D  
Sbjct: 16  GGIFDFDEKKNRLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTR 75

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A+ E+D + L+E       I+  VE  +F  + S  AD    +LE+ AGAGGTE+
Sbjct: 76  DLYEMAVAENDDATLEELERESLGIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA MLLR Y R+ E+R F T  LE  +G+ AGIK ATL ++G  AYG+L+ E G+HRL
Sbjct: 136 CDWAAMLLRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRL 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIE++I+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 196 VRKSPFDSSGGRHTSFASVYVYPEVDDSIEVDINPADLRIDVYRASGAGGQHVNKTESAV 255

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQH+N+ +A  MLRA+L+ELEL+KR+   +  E+SKT+IGWG 
Sbjct: 256 RITHLPTNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWGH 315

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN E ++   VLDGDLDDF+  +L
Sbjct: 316 QIRSYVLDQSR-IKDLRTNFETSNTKAVLDGDLDDFIAESL 355


>gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2846]
          Length = 365

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 184/351 (52%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + LS + + L G  D+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK
Sbjct: 12  IDLSDRTSVLRGYLDFDAKVERLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y++
Sbjct: 72  NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GW
Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG
Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E
Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 312 DNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361


>gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1]
 gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 367

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 177/349 (50%), Positives = 250/349 (71%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + N L    D+D+  +RL+ +N   EDP +W +   A+ L RER+ L++ +  +  I
Sbjct: 16  LRNRSNELRRFLDFDSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLEDVVLGLIRI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   L E+A  E+D   L   + ++Q I+  V   +F  + S  AD N+ ++++ 
Sbjct: 76  SQNLDDAAELFEMAQAENDDDSLNSIAADVQDIETRVAALEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE  DG+ AGI+SA+L ++G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVEGEYAYGHLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++V P VDDSIE++I+ +D RIDT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVSPEVDDSIEVDINPADLRIDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITH PTG+VVQCQ +RSQH+NKA+A +ML+++LYELEL+KR+  A+  E+S
Sbjct: 256 INKTDSAIRITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELELRKRQSEADKLEAS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 316 KTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIEASL 363


>gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
 gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
          Length = 348

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 173/345 (50%), Positives = 244/345 (70%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +N   EDP +W +   A+ L +E++ L++ +  IK +   L
Sbjct: 1   MKSCGGIFDYDQKERRLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D L L E+A EEDD + L+    ++  +K EVE+ +F+ + + E D  + +LE+ AGAG
Sbjct: 61  SDALELFEMAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+ML RMY ++AE++ FK E +E  +G+ AGIK  T+ I G  AYGWL+ E G
Sbjct: 121 GTEAQDWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+  T
Sbjct: 181 IHRLVRKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+V   Q  RSQH+NK +A  +L+++LYE EL+KR+      E +K++I
Sbjct: 241 DSAVRITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYVL   + VKDLRTN+E  + + VLDG L+ F++A+L
Sbjct: 301 SWGHQIRSYVLDQSR-VKDLRTNVETGNTTAVLDGALESFIEASL 344


>gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18]
 gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18]
          Length = 371

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 174/346 (50%), Positives = 245/346 (70%), Gaps = 1/346 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L GLFD D+  +R+  L+  T  P  W +   A+ +++ R  ++  ++  + +
Sbjct: 12  LVERIDKLRGLFDVDDKKERMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L+EL  EE+D + L E +     ++  V   +F  +LSG  D++ A++ ++
Sbjct: 72  DRQARDIRELIELGSEEEDEATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY R+ EK+ ++TE  +  +G+ AGIK  T    G  AYG+LK
Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            + G+HRLVRISP+DS++RRHTSF+S++V+PV+++  IE++I+ESD RIDTYR+SGAGGQ
Sbjct: 192 ADAGIHRLVRISPFDSSARRHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RITH+PTG+VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+    
Sbjct: 252 HVNTTDSAIRITHLPTGIVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+
Sbjct: 312 EKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALDDFV 357


>gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|61230204|sp|P0A289|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|61230205|sp|P0A290|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76363351|sp|Q5PJG1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238690721|sp|B5BFK6|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 365

 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 187/349 (53%), Positives = 240/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|224438340|ref|ZP_03659267.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
          Length = 365

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + + D+  +R+  +N        W +  +A  + +E++  +  +S   E+
Sbjct: 13  LQNKAQNIAKILNPDSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L E+A  E D S L+   +N++ ++  ++  + E +LSGE DS++A + + 
Sbjct: 73  KAELDDAKELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSSNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RW+E+R FK E L+  DGEEAGIK A  +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGES 301
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELE L++ E +AN   +
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVAN---A 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K+EIGWG QIRSYVL PYQ VKDLR+N   +    VLDGD+DD +++ L +
Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVLVL 361


>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
 gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 366

 Score =  359 bits (921), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 240/349 (68%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++L+ L   FD     +R + L+ +   P  W +   AK +  E    ++ +  ++E+
Sbjct: 11  LSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRLKLMEEL 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D+  LLELA  E D  +L+E    L+ I+  +E ++   L +GE D  DA L ++
Sbjct: 71  RGRLEDSSELLELA--EGDRELLEEVERELEGIERRIEEQEVARLFTGEYDEGDAILTIN 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG +SQDWA ML RMY RWAE+R F  E +E  +GEEAGIKSAT  + GP A+G L 
Sbjct: 129 SGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSGPYAFGLLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++SRRHTSF+S+ V P +DD++E+EI E D ++DTYRASGAGGQH
Sbjct: 189 AERGVHRLVRISPFDASSRRHTSFASVAVAPAIDDAVEVEIDEKDLKVDTYRASGAGGQH 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VVQCQ ERSQH+N+  A  +L+A+L+ELE +KRE+        
Sbjct: 249 VNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQEIAAQSGE 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K EIGWG QIRSYVL PY+MVKDLRT  E      VLDGDLD F+ A L
Sbjct: 309 KAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYL 357


>gi|1172913|sp|P43918|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2866]
          Length = 365

 Score =  359 bits (921), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 184/351 (52%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + LS + + L G  D+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK
Sbjct: 12  IDLSDRTSVLRGYLDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y++
Sbjct: 72  NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GW
Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG
Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E
Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 312 DNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361


>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
 gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
          Length = 336

 Score =  359 bits (921), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 169/332 (50%), Positives = 238/332 (71%), Gaps = 1/332 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  + +LWQ+  +A+ +++ER  + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +GE  GIKSA + I G  AYGW K E G+HRLVRISP+D+N 
Sbjct: 122 VRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QMVKDLRT  E  + + V DG++D F+ + L 
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333


>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 368

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 177/349 (50%), Positives = 240/349 (68%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D DN + R+  L  ++  P+ W N   A  + +E+  L + I   +++
Sbjct: 16  LQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTIDNWQQV 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D   D  +LLELA+ E+D    QE S  L  ++  +   + E + +GE D+++A L +H
Sbjct: 76  IDSFEDAEVLLELAIAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHDASNAMLTIH 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW ++LLRMY RWAEK+ F TE L+   G+EAG KS T+L+KG  AYG+L+
Sbjct: 136 AGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVKGRWAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D+  RRHTSF+S++++P +DD+IE+EI++ D RIDTYRASGAGGQH
Sbjct: 196 SEMGIHRLVRISPFDTGGRRHTSFASVFIFPELDDNIEVEINDKDLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SA+RITH+P+G+VVQCQ ERSQH+NK  A  ML+A+LYE E   R+E        
Sbjct: 256 VNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHGD 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K EI WG QIRSYVLQPY++VKD RTN E  +  +VLDGDLD F+ + L
Sbjct: 316 KKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYL 364


>gi|254458681|ref|ZP_05072105.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
 gi|207084447|gb|EDZ61735.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
          Length = 369

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 183/353 (51%), Positives = 241/353 (68%), Gaps = 10/353 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++N + G+ + D    RL  +     D   W +   A  + +E+  L   +      
Sbjct: 13  LNLKMNNITGVVEPDKLTSRLEEIEELENDQDFWNDADNAAKIQKEKTQLQRKLDKYSIA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           +D + D L L E+A EE+D   ++     + +L+++ L +E    E LLSGE DSN+A L
Sbjct: 73  KDAITDALELYEMAKEENDEDSIELCFSDASDLEQLILNME---VEVLLSGETDSNNAIL 129

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +H GAGGTESQDWA MLLRMY RWAE+  F  E L+   G+EAGIK A++LIKG NAYG
Sbjct: 130 SIHPGAGGTESQDWAEMLLRMYKRWAERHGFGVEVLDYQVGDEAGIKDASILIKGENAYG 189

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E G+HRLVRISP+DSN++RHTSFSS+ V P +DD I I + + D RIDTYRASGAG
Sbjct: 190 YLKVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEIDDDINIVVEDKDIRIDTYRASGAG 249

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANI 298
           GQHVN T+SA+RITHI T V+VQCQ +RSQHKNKA A  MLR++LYELEL  ++ EIA I
Sbjct: 250 GQHVNKTESAIRITHIATNVIVQCQNDRSQHKNKATAMKMLRSRLYELELAAQKAEIAGI 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +K+EIGWG QIRSYV+QPYQ VKD R+N   ++ S +LDGD+D  ++  L
Sbjct: 310 ---AKSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDKMIEGVL 359


>gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille]
 gi|166223628|sp|A6SXF4|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 367

 Score =  358 bits (920), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 177/338 (52%), Positives = 241/338 (71%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   ++L  +N + EDP +W +   A+ L +E++ L+  +  + +I   L D   L 
Sbjct: 27  LDFDVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELNDARDLF 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+A EE D   +    ++ Q +   VE  +F  + S   D+N+ ++++ AGAGGTE+QDW
Sbjct: 87  EMAREEKDEDTIVAIENDAQELLKLVEGMEFRRMFSNPMDANNCFIDIQAGAGGTEAQDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y R+ E++ FK E LE  DGE AGIK+ATL ++G  AYG+L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS + RHTSFSS++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+T
Sbjct: 207 SPFDSANGRHTSFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H P+G+VVQCQ +RSQH+NKA+AW+ML+AKL+ELE++ R       E SKT++GWG QIR
Sbjct: 267 HGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN E  +   VLDGDLDDF+ A+L
Sbjct: 327 SYVLDQSR-IKDLRTNFETGNTKAVLDGDLDDFIAASL 363


>gi|71153099|sp|Q7VNG1|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 174/349 (49%), Positives = 240/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   + G  D+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +
Sbjct: 14  LTERTQLIRGYLDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L+ELA+E +D   L E       +  ++   +F+ + SG  D+ D YL++ 
Sbjct: 74  IQGIEDVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+P+G+VVQCQ  RSQH+NK Q    LRAKLYE+E+ K+       E +
Sbjct: 254 VNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEEN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361


>gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
 gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
          Length = 355

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 173/348 (49%), Positives = 243/348 (69%), Gaps = 1/348 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ L   GG FD +   + +  L+ + EDP  W +   ++ + +E++ L++ +     + 
Sbjct: 5   TKNLIPCGGFFDLEEKKRTIKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQADSLI 64

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L DN  L ++A+EE+D + L     + ++++  V+  +F+ + S   D N+ +++  +
Sbjct: 65  SDLADNQELFDMAVEENDLNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVDFQS 124

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWANML RMYTR+AE++ FK E LE  +GE AGIK ATL I G  A+G+L+ 
Sbjct: 125 GSGGTEAQDWANMLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGFLRT 184

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRLVR SP+DS SRRHTSF+ + VYP +D+SI+I+I+ SD RIDTYRASGAGGQH+
Sbjct: 185 ESGIHRLVRKSPFDSGSRRHTSFAGVNVYPEIDESIDIDINPSDLRIDTYRASGAGGQHI 244

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH+PT  VVQCQ +RSQH+NKAQA NML+A+LY +EL KR E     E +K
Sbjct: 245 NKTDSAVRITHVPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAMEDAK 304

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           T+IGWG QIRSYVL   + +KDLRTN+E  +   VLDGDLD F+  +L
Sbjct: 305 TDIGWGHQIRSYVLDQSR-IKDLRTNLEVGNTQGVLDGDLDMFISESL 351


>gi|330719765|gb|EGG98281.1| Peptide chain release factor [gamma proteobacterium IMCC2047]
          Length = 365

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 179/350 (51%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + + L G  D+     RL  +  + ED  +W     A+ L +ER  L+N ++ I  
Sbjct: 13  ELQERTDVLRGYLDYAEKKDRLEEVERELEDSAVWDEPERAQALGKERSQLENIVATIDR 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D   LL +A+EEDD   + E S  ++ +  ++   +F  + SGE D N A+L++
Sbjct: 73  LDSGISDGHELLAMAIEEDDEDTVNEVSAEIETLDAQLAKLEFRRMFSGEMDENSAFLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA MLLRMY RW E++ FK E +E+  G+ AGIK AT+  +G  A+GWL
Sbjct: 133 QAGSGGTEAQDWAEMLLRMYLRWGEQKGFKVELMEVSAGDVAGIKGATIKFEGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS SRRHTSFS+++V P +DD++EI+I+ +D RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGSRRHTSFSAVFVSPEIDDNVEIDINPADLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH PT VVVQCQ +RSQH+NK  A   LRAKLYELE+QKR + A   E 
Sbjct: 253 HVNKTDSAVRITHEPTNVVVQCQSQRSQHQNKDFAMKQLRAKLYELEMQKRNDAAQAQED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K +IGWG QIRSYVL   + +KDLRTN+E ++   VLDG LD F++A+L
Sbjct: 313 NKADIGWGSQIRSYVLDSSR-IKDLRTNVETSNTQAVLDGGLDMFIEASL 361


>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
           propionicus DSM 2032]
          Length = 369

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 175/338 (51%), Positives = 233/338 (68%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D   +++  L  +T  P+ W N  EAK + R+   L + I   ++    L D  +LL
Sbjct: 28  LDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDLIGVWEKNFGDLEDAEMLL 87

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++A EE+D    QE    L  ++  VE  + E + SGE D+N+A L +HAGAGGTE+QDW
Sbjct: 88  DMAREENDQDTYQEVVSGLDDLRRRVELVELECMFSGEHDANNAILTIHAGAGGTEAQDW 147

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             +LLRMY RWAE + FK + L++  G+EAG KS T+++KG  AYG+L+ E G+HRLVRI
Sbjct: 148 VGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLRSEVGIHRLVRI 207

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D++ RRHTSF+S+ V P +DD +EIEI++ D RIDTYRASG+GGQHVN TDSA+RIT
Sbjct: 208 SPFDASGRRHTSFASVMVMPELDDDVEIEINDKDIRIDTYRASGSGGQHVNKTDSAIRIT 267

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ ERSQH NKA A  ML A+LYE E ++++      +  K EI WG QIR
Sbjct: 268 HFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGDKKEIAWGSQIR 327

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVLQPY+++KD RTN E+ +   VLDG LD F+KA L
Sbjct: 328 SYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYL 365


>gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
          Length = 375

 Score =  358 bits (919), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 177/349 (50%), Positives = 245/349 (70%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  +N + E P++W +   A+ L RER  L+  +  I  +
Sbjct: 14  LTGRVVSLRGYLDYDAKKERLEEVNRELELPNVWDDPERAQALGRERALLEKTVGGIASV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L  +  LLELA  E D    +    ++ R +  +E  +F+ + SG+ D  +A++++ 
Sbjct: 74  LEGLEGSTELLELAESEQDEETAEAVVADVDRFEKHIEALEFQRMFSGQMDGANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMY RW E R +KTE LE+  G+ AGIKSAT  ++G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEMLLRMYLRWCESRGWKTELLEVSGGDVAGIKSATFRVEGDFAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD I+IEI+ +D + D YR+SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+P+G+VV CQ ERSQH N+ +A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYELEIQKRNAEKDAVEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361


>gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226739123|sp|B7J4M2|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 365

 Score =  358 bits (919), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 174/349 (49%), Positives = 240/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D +    RL  +  + EDP +W N  +A+ L RER  L+  I+ + ++
Sbjct: 14  LQVRVAGLRGYLDLEEKRGRLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   +LELAL E D  +L     +L      VE  +F+ + SG  D+ + ++++ 
Sbjct: 74  TASLADGGEMLELALSEQDAELLAAVDADLDTALSLVEKLEFQRMFSGAQDAANCFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA M+LRMY  WAE   F  E +E+ +GE AGIKSA++ ++G +A+GWL+
Sbjct: 134 AGAGGTEAQDWAEMILRMYLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP +DDS E++I+ +D ++DTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEVDINPADLKVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH+P+G+VV CQ +RSQHKN+A+A  MLR+KLYE+E+QKR       E S
Sbjct: 254 VNKTDSAIRITHVPSGIVVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDS 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E      VLDG LD F++A L
Sbjct: 314 KSDIGWGHQIRSYVLDQSR-IKDLRTGVEVGDTQKVLDGALDMFIEAAL 361


>gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577]
          Length = 359

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 171/342 (50%), Positives = 246/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +R   ++   EDP +W++   A+ L RE++ LD  +  ++ I+ +L D+
Sbjct: 15  FGGIFDFDAKKERSDEISFLEEDPEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQDS 74

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           + L ++A EE+D  +L+    +  +++  V   +F ++ S   D N+ +LE+ +G+GGTE
Sbjct: 75  IDLFQMAKEENDIVVLESIRADAAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGGTE 134

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA ML RMY R+ E+R +K E LE   GE AGIKSA+L I G  AYG+L+ E G+HR
Sbjct: 135 AQDWAAMLERMYLRYCERRDYKVEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGIHR 194

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS SRRHTSF+S+++YP VDD+IEIEI+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 195 LVRKSPFDSGSRRHTSFASVFIYPEVDDTIEIEINPADLRVDTYRASGAGGQHINKTDSA 254

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH P+G+VV CQ +RSQH+N+A+A  ML+++LYE+EL+K+ +     E SKT+IGWG
Sbjct: 255 IRITHNPSGIVVSCQNDRSQHRNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIGWG 314

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDG LD+F+K +L
Sbjct: 315 HQIRSYVLDQSR-IKDLRTGLEIGNTQGVLDGGLDEFIKTSL 355


>gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900]
 gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
 gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
 gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
          Length = 310

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/307 (55%), Positives = 226/307 (73%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 RFIEASL 306


>gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822]
 gi|81579293|sp|Q7W8T4|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis]
          Length = 367

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 246/338 (72%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+   L D+  L+
Sbjct: 27  LDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELV 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELAL + D + L+    ++ R + ++E  +F  + +  AD  + ++++ AGAGGTE+QDW
Sbjct: 87  ELALADSDDATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT++GWG QIR
Sbjct: 267 HAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363


>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 336

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 169/332 (50%), Positives = 237/332 (71%), Gaps = 1/332 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  +  LWQ+  +A+ +++ER  + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +GE  GIKSA + I G  AYGW K E G+HRLVRISP+D+N 
Sbjct: 122 IRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QMVKDLRT  E  + + V DG++D F+ + L 
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333


>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 369

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  LG   D      RLS L T++EDP  W +   A+ +++E+  L    S   E+
Sbjct: 14  MDAELTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L D  ++ ELA E +    L++     Q    + E  + E LLSGE DSN+A + +H
Sbjct: 74  KEELDDVSVMYELAEEGEGMDELEQMLGAFQE---KFEDFKLEMLLSGEYDSNNAIISLH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+MLLRMYTRWAE R +K + L+   G+ AGIKSATLLI+G NAYG+LK
Sbjct: 131 PGAGGTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+  D R+DTYR+SGAGGQH
Sbjct: 191 TERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SA+RITH+PTGVVVQCQ ERSQH+N+  A NML++KL E+  Q+++E        
Sbjct: 251 VNKTSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGD 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            ++I WG QIRSYV  PY MVKD RT +E  +   V+DGDLD FM A L
Sbjct: 311 YSQIAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFMNAEL 359


>gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12]
 gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12]
          Length = 367

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 171/349 (48%), Positives = 247/349 (70%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  L G  D+D    RL  +    EDP +W +   A+ L RER+ L+  +  ++ +
Sbjct: 16  LQQRVQALRGYLDFDAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  L E++ EE D +  +    ++++   EVE  +F  + S   D ++ ++++ 
Sbjct: 76  TTALADHSELFEMSREEGDDATCEAIEADVEKSAAEVEALEFRRMFSNPLDPSNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE +E  +G+ AGI+SAT+ ++G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+TH+PTG+VVQCQ +RSQHKN+A+AW MLR++LYE E++KR       ES+
Sbjct: 256 INKTDSAVRLTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLEST 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD+F+ A+L
Sbjct: 316 KSDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDEFITASL 363


>gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693429|sp|B4SHV0|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 374

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 241/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  +  + E P +W N   A+ L RER  L+  +  I  +
Sbjct: 14  LTDRVLSLRGYLDYDAKKERLEEVTRELESPDVWNNAEYAQNLGRERSSLEKTVGGIASV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D L D   LLELA  E D         +L + +  VE  +F+ + SGE D+  A++++ 
Sbjct: 74  LDGLADATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RW E R +KTE +E+  G+ AGIKSATL ++G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361


>gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
 gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
          Length = 329

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 177/326 (54%), Positives = 229/326 (70%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + E P +W     A+ L +ER  L+  +  I ++   + D   LLELA+E DD    
Sbjct: 1   MNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEADDEETF 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  ++ ++E  +F  + SGE DS D Y+++ AG+GGTE+QDWA+ML+RMY RWA
Sbjct: 61  NEAGAELDALQGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTS
Sbjct: 121 ESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ 
Sbjct: 181 FSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG QIRSYVL   + +KD
Sbjct: 241 DRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDAR-IKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT +E  +   VLDGDLD F++A+L
Sbjct: 300 LRTGVETRNTQAVLDGDLDKFIEASL 325


>gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
 gi|81578745|sp|Q7VZ35|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81580061|sp|Q7WK44|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
          Length = 367

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+   L D+  L+
Sbjct: 27  LDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELV 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELAL + D + L+    +  R + ++E  +F  + +  AD  + ++++ AGAGGTE+QDW
Sbjct: 87  ELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT++GWG QIR
Sbjct: 267 HAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363


>gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
 gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
          Length = 320

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 176/317 (55%), Positives = 229/317 (72%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W    +A+ L +ER  L+  +  I +++  L D   LL+LA+E DD     E    L+ 
Sbjct: 1   MWNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADDEETFNEAVAELEG 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  ++E  +F  + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE 
Sbjct: 61  LNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEI 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP 
Sbjct: 121 IEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK 
Sbjct: 181 VDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   ++AKLYELE+QK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDKFIEASL 316


>gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 332

 Score =  356 bits (913), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/326 (53%), Positives = 230/326 (70%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + E P +W     A+ L +ER  L+  +  + ++   L D   LLELA+E +D    
Sbjct: 4   VNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEDTF 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +  ++   +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWA
Sbjct: 64  NEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + FKTE +E  DGE AG KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTS
Sbjct: 124 EAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ 
Sbjct: 184 FSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQN 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNK QA+  LRAKLYE E+QK+       E +K++IGWG QIRSYVL   + +KD
Sbjct: 244 DRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDSR-IKD 302

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT++E  +   VLDGDLD F++A+L
Sbjct: 303 LRTSVETRNTQAVLDGDLDRFIEASL 328


>gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
          Length = 349

 Score =  356 bits (913), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 173/341 (50%), Positives = 243/341 (71%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD+     RL  +   +E P  W +   A+ L RER+ L++ +  +  +   L D  
Sbjct: 6   GGFFDYPVKKDRLEEVVRLSEAPDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAG 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A EE+D   L     ++  ++ +V   +F  + S  AD ++ +L++ AGAGGTE+
Sbjct: 66  ELFEMAREENDDDTLAAVQADIDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++AE++ FK E LE  +G+ AGIKSA++ I+G  AYG+L+ E GVHRL
Sbjct: 126 CDWASMLLRQYLKYAERKGFKAELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIE+EI+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 186 VRKSPFDSSGGRHTSFASVFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIP+G+VVQCQ +RSQHKN+A+A +ML++KLYE EL+KR+   +  E+ K ++GWG 
Sbjct: 246 RITHIPSGIVVQCQNDRSQHKNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWGH 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 306 QIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 345


>gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 335

 Score =  356 bits (913), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  + +LWQ+  +A+ +++ER  + + I    +++    D++ L+  A++E+D
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E    L +++  ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW  ML+RMY
Sbjct: 62  EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           TRWAE    FK E +E  DG+  GIKS T+ I G  AYGW K E GVHRLVRISP+D+N 
Sbjct: 122 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            QCQ  RSQHKNK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QMVKDLRT  E  + + V DG++D F+ + L +K
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 335


>gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 337

 Score =  355 bits (912), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  + +LWQ+  +A+ +++ER  + + I    +++    D++ L+  A++E+D
Sbjct: 4   RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E    L +++  ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW  ML+RMY
Sbjct: 64  EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 123

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           TRWAE    FK E +E  DG+  GIKS T+ I G  AYGW K E GVHRLVRISP+D+N 
Sbjct: 124 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 183

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 184 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 243

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            QCQ  RSQHKNK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 244 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 303

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QMVKDLRT  E  + + V DG++D F+ + L +K
Sbjct: 304 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 337


>gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9]
 gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9]
          Length = 368

 Score =  355 bits (912), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 172/338 (50%), Positives = 240/338 (71%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D    RL  ++   EDP +W++   A+ L RE++ L++ +  I  I   L D+  L 
Sbjct: 28  LDYDGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSILSTLADSRELF 87

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++   E+D   +    D+L  ++  +E  +F  + S   D N  ++++ +GAGGTE+QDW
Sbjct: 88  DMGRAEEDDDTVLAVRDDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQSGAGGTEAQDW 147

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML RMY R+ E++ FK E +E  +GE AGIKSATL ++G  AYG+L+ E GVHRLVR 
Sbjct: 148 ASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLRTETGVHRLVRN 207

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RR TSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 208 SPFDSNNRRQTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVRIT 267

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PT +VVQCQ +RSQHKN+A+A +ML+A+L+ELEL+KR E     E +KT++GWG QIR
Sbjct: 268 HLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDTKTDVGWGHQIR 327

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV    + VKDLRT +E  +   V+DGDLD F++A+L
Sbjct: 328 SYVFDQSR-VKDLRTLVEVGNVKGVMDGDLDGFIEASL 364


>gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804]
 gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii]
          Length = 337

 Score =  355 bits (912), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 168/332 (50%), Positives = 242/332 (72%), Gaps = 1/332 (0%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  +N + EDP +W +   A+ L RE++ L++ ++ +  ++  + D L L ELA  +
Sbjct: 3   AERLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELASAD 62

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           DD + L+    +    + ++E  +F  + S  AD  + +L++ AGAGGTE+QDWA+MLLR
Sbjct: 63  DDDATLESIESDADGFQQQLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLLR 122

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ E GVHRLVR SP+DS+
Sbjct: 123 QYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSPFDSS 182

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
             RHTSF+S++VYP VDDS EI+++ +D R+DTYRASGAGGQH+N TDSAVR+TH+PTG+
Sbjct: 183 GGRHTSFASVFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTGI 242

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT++GWG QIRSYVL  
Sbjct: 243 VVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVLDQ 302

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 303 SR-IKDLRTNVEISNTQKVLDGDLDTFIQASL 333


>gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
 gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
          Length = 325

 Score =  355 bits (912), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P +W +   A  L RER  L   +S ++ +   L D   LLELA  E+D + L E   
Sbjct: 2   EQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTENDEATLAELDA 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           ++   + E+E  +F  + SGE D  +A+L++ AG+GGTE+QDWANMLLRMY RW E+++F
Sbjct: 62  DVTGYQSEIEALEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRWVEQKRF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E +E  +GE AGIKSATL I+G  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++
Sbjct: 122 TAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD++E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQH
Sbjct: 182 VSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNKA A   LRAKLYELE+ KR E A+  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E      VL+G LD F++A+L
Sbjct: 301 EIGHTQAVLNGALDPFIEASL 321


>gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia
           Coli
          Length = 365

 Score =  355 bits (912), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 233/349 (66%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + + 
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQX 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F    SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRXFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ L R Y RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA    +AKLYE+E QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361


>gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9]
 gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9]
          Length = 332

 Score =  355 bits (912), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 178/326 (54%), Positives = 227/326 (69%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + E P +W     A+ L +ER  L+  +  + +++  L D   LLELA+E DD    
Sbjct: 4   VNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETF 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWA
Sbjct: 64  NEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTS
Sbjct: 124 ESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ 
Sbjct: 184 FSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL   + +KD
Sbjct: 244 DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKD 302

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT +E  +   VLDG LD F++A+L
Sbjct: 303 LRTGVETRNTQAVLDGSLDQFIEASL 328


>gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
 gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
          Length = 349

 Score =  355 bits (911), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 184/341 (53%), Positives = 241/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+     RL+ +  + EDP +W +   A+ L RER  L+  +  I E+   L D  
Sbjct: 6   GGIFDYAERKDRLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADAD 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL LA EE D + L+    +L+  +  V   +F  + SGE D+ +A++++ AG+GGTE+
Sbjct: 66  DLLALAAEESDEATLESLVADLKSHEARVSELEFRRMFSGEMDACNAFVDIQAGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RW E+R FKTE +E+  GE AGIKSAT+  +G  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSFSS++V P VDDS+EIEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 186 VRKSPFDSGNRRHTSFSSVFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQHKNK QA   L++KLYELE+QKR       E +K++IGWG 
Sbjct: 246 RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKSDIGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDG+LD F++A+L
Sbjct: 306 QIRSYVLDQSR-IKDLRTGVEIANTQGVLDGNLDPFIQASL 345


>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
 gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
           parvula DSM 2008]
          Length = 368

 Score =  355 bits (911), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 171/349 (48%), Positives = 243/349 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +G  F+      R+  L+ +  DP  W N  +A+ + +E   L NA+   K++
Sbjct: 12  LEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  ++LE+A++EDD S+  E  + +++I+  +E ++   LLSGE D+N+A L  H
Sbjct: 72  VSDIEDANVMLEMAIDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEYDANNAILTFH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW +ML+RMY RWAEK  F  E ++   G+EAGIKSAT L+KG NA+G+LK
Sbjct: 132 AGAGGTEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D+ +RRHTSF+++ V P +DD++EI I   D ++DTYRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDAAARRHTSFAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+TH PTG+VVQCQ +RSQ +N+ QA  +LRAKL+ELEL+K+ E+      +
Sbjct: 252 INKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              I WG QIRSYV  PY +VKD RT++E  +   V+DG+LD F++  L
Sbjct: 312 YQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFL 360


>gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
 gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
          Length = 349

 Score =  355 bits (910), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 173/341 (50%), Positives = 240/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+     +L  +N + EDP +W +  +A+ L RE++ L+N +  +  I+  L D  
Sbjct: 6   GGIFDFAAKSDKLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDAG 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A EE D   L+    ++  ++  +E  +F  + S   D  + ++++ AGAGGTE+
Sbjct: 66  ELFEMAKEEQDDETLKAVEADVSELQDRIEKLEFRRMFSNPMDPCNCFVDIQAGAGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+M+LR Y R+ E++ F    LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHRL
Sbjct: 126 QDWASMILRQYLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS + RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 186 VRKSPFDSANGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQCQ +RSQH+N+A AW ML+++LYELEL+KR       E SKT++GWG 
Sbjct: 246 RLTHIPTGIVVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWGH 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT+ E  +   VLDGDLDDF+  +L
Sbjct: 306 QIRSYVLDSSR-IKDLRTSHETGNTKAVLDGDLDDFIIESL 345


>gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
 gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
          Length = 349

 Score =  355 bits (910), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 174/344 (50%), Positives = 243/344 (70%), Gaps = 1/344 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD+D  V+RL  +  + E P +W +   A+ L +ER  L+  +  IK ++    
Sbjct: 3   NYSGGIFDYDVKVERLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCD 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + L+L+ELA++E D     E ++    ++ ++E  +F  + SG+ DS   YL++ +G+GG
Sbjct: 63  EILMLVELAVDEQDQDTFDEAANETLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWANMLLRMY RW E   +KTE +E+  G+ AGIK AT+   G  AYGWL+ E GV
Sbjct: 123 TEAQDWANMLLRMYLRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+ +RHTSF+S +VYP V+D+I+I I+ ++ RID YRASGAGGQHVNTT+
Sbjct: 183 HRLVRKSPFDSSGKRHTSFASAFVYPEVEDNIDIVINPAELRIDVYRASGAGGQHVNTTE 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +VVQCQ +RSQHKNK QA   L+AKLYE E+Q +     I E +K++IG
Sbjct: 243 SAVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYVL   + +KDLRT +E  +P  VLDG+L++F++A+L
Sbjct: 303 WGSQIRSYVLDDAR-IKDLRTGVESRNPQRVLDGELNEFIEASL 345


>gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae]
          Length = 332

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 176/326 (53%), Positives = 230/326 (70%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + E P +W     A+ L +ER  L+  +  I  +   L D   LL+LA+E DD    
Sbjct: 4   VNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDEDTF 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L +++ ++   +F  + SG+ DS + YL++ AG+GGTE+QDWA+ML+RMY RWA
Sbjct: 64  HEAVAELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTS
Sbjct: 124 ESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ 
Sbjct: 184 FSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTGIVTQCQN 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNK QA+  L+AKLYELE+QK+       E +K++IGWG QIRSYVL   + +KD
Sbjct: 244 DRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWGSQIRSYVLDDSR-IKD 302

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT +E  +   VLDGDLD F++A+L
Sbjct: 303 LRTGVENRNTQAVLDGDLDKFIEASL 328


>gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF]
 gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii]
          Length = 310

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 169/307 (55%), Positives = 225/307 (73%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E  K++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDLKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 RFIEASL 306


>gi|77359475|ref|YP_339050.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|123589557|sp|Q3ILD8|RF2_PSEHT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76874386|emb|CAI85607.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 365

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 180/342 (52%), Positives = 232/342 (67%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G  D+    +RL  +N + ED  +W     A+ L RE+  L+  +  I  +     D 
Sbjct: 21  LRGYLDYALKQERLEEVNAELEDSAVWNEPERAQALGREKSALEAVVETIDTLVTGTDDV 80

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  +  ++E  +F  + SG  DSNDAYL++ +G+GGTE
Sbjct: 81  EGLLELAVEAEDQETFDEAQSELADLNEQLEALEFRRMFSGPHDSNDAYLDLQSGSGGTE 140

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW N+LLRMY RW E + FK E +E   G+ AGIK AT+   G  AYGWL+ E GVHR
Sbjct: 141 AQDWCNILLRMYLRWGEAKGFKVELVEATGGDVAGIKGATVRFVGEYAYGWLRTETGVHR 200

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF+S +VYP VDD+IEI+++ SD RID YRASGAGGQHVNTT+SA
Sbjct: 201 LVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDMNPSDLRIDVYRASGAGGQHVNTTESA 260

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++       E SK++IGWG
Sbjct: 261 VRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDSKSDIGWG 320

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDG+LD F++A+L
Sbjct: 321 SQIRSYVLDDAR-IKDLRTGVESRNTQSVLDGNLDKFIEASL 361


>gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
          Length = 310

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 168/307 (54%), Positives = 226/307 (73%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRA+L
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 RFIEASL 306


>gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707]
 gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
 gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
          Length = 331

 Score =  354 bits (909), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 173/319 (54%), Positives = 226/319 (70%), Gaps = 1/319 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P +W     A+ L +ER  L + ++ + E+   +     L ELA+EE D    QE    L
Sbjct: 10  PSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDTAQEIIAEL 69

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++  +   +F+ + +GE D N+AYL++ AG+GGTE+QDWANMLLRMY RW EK  FKT
Sbjct: 70  DVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWGEKHSFKT 129

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E  E+ +GE AGIKSA +  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++VY
Sbjct: 130 ELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVY 189

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+P+ +VVQCQ ERSQH+N
Sbjct: 190 PEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSLVVQCQSERSQHQN 249

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           KA A   LRAKLYELE++ R+      E +K +IGWG QIR+YVL   + +KDLRT IE 
Sbjct: 250 KAHAMAQLRAKLYELEMRNRQAEKQAAEEAKADIGWGSQIRNYVLDQSR-IKDLRTGIEV 308

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   VLDGDLD F++A+L
Sbjct: 309 GNTQGVLDGDLDSFIEASL 327


>gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 349

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 169/342 (49%), Positives = 245/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL+ +N+  EDP +W +  +A+ L +E++ LD  ++ + ++   +   
Sbjct: 5   FGGIFDFDVKSRRLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNITSA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L ++A EE D   +     +++     +   +F  +   E DS + ++++ AGAGGTE
Sbjct: 65  LELFDMAKEESDFETIAAIEQDVEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+ML R Y ++ E++ +KTE LE  DG+ AGIKSAT+ + G  AYG L+ E GVHR
Sbjct: 125 ACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS++ RHTSF+SI+VYP +DDSIEIE++ +D R DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE E+QKR    +  E+SKT++GWG
Sbjct: 245 VRLTHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 305 HQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 345


>gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
 gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
          Length = 364

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 173/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L G  D++   +RL  ++ + EDP +W +   A+ L +ER  L+  +  I ++   + D
Sbjct: 19  ALRGFLDYETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDLTAGVAD 78

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LL++A+EEDD   + E   ++  +   ++  +F  + +GEAD N+A+L++ AG+GGT
Sbjct: 79  TRDLLDMAVEEDDEDTVAEVESDVTAMLDRLQQLEFRRMFAGEADPNNAFLDIQAGSGGT 138

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA M+LRMY RW E + FKTE LE   G+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 139 EAQDWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLRTETGVH 198

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSFSS++V P +DD+I+IEI+ +D R+D YRASGAGGQHVN T+S
Sbjct: 199 RLVRKSPFDSGGRRHTSFSSVFVSPEIDDNIDIEINPADLRVDVYRASGAGGQHVNRTES 258

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH P+G+VVQ Q +RSQH+NK      LRAKLYE+E+ KR E A   E +K +IGW
Sbjct: 259 AVRITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQEDNKADIGW 318

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   Q +KDLRT ++ ++   VLDGDLD F++A+L
Sbjct: 319 GSQIRSYVLDD-QRIKDLRTGVQSSNCDKVLDGDLDMFIEASL 360


>gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
 gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
          Length = 310

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 169/307 (55%), Positives = 225/307 (73%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L +    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLVDVQSELGTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIP+G+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPSGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 RFIEASL 306


>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
 gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
          Length = 370

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 243/349 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++N L G  D D+  + +  L ++   P  W +   A+ +++ER  ++  ++    +
Sbjct: 12  MAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D  +L+EL  E +D + L E  D   +++  +   +F+ +LSG  D++  +  ++
Sbjct: 72  NRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY R+ E++ +KTE  +   G+EAG+K  T  + G  AYG+LK
Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D I+++I E+D R+DT+R+SGAGGQH
Sbjct: 192 AEVGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSA+RITHIPTG+VV CQ ERSQH N+A A  +LRAKLYE ELQ+RE  A      
Sbjct: 252 VNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIAGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG+L+ F+ A L
Sbjct: 312 KKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFL 360


>gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|167710441|gb|EDS21020.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SSC/2]
          Length = 373

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 178/347 (51%), Positives = 239/347 (68%), Gaps = 2/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L G    +   +R+  L    E+P  W NV E++ +M+E + L   +    +++ + 
Sbjct: 18  LEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L+++A E++D  +++E +  +   +   E  +  +LL+GE D +DA L +HAGAG
Sbjct: 78  EDIETLIDMAEEDEDADLIEEATALMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA ML RM+TRWA K+ + TE L+  DG+EAGIKS T+ I G NAYG+L+ E+G
Sbjct: 138 GTESCDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+++  +R TSF+S  V P + D IE+EI++ D RIDTYRASGAGGQH+N T
Sbjct: 198 VHRLVRISPFNAAGKRQTSFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTE 305
           DSA+RITH+PTG+VVQCQ ERSQHKNK QA  ML+ KLY L+ Q+  E++++I      +
Sbjct: 258 DSAIRITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDI-RGDVGD 316

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            GWG QIRSYVLQPY MVKD RTN E  +PS VLDGDLD FM A LA
Sbjct: 317 NGWGNQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLA 363


>gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 310

 Score =  354 bits (908), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 168/307 (54%), Positives = 225/307 (73%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 RFIEASL 306


>gi|322435983|ref|YP_004218195.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
 gi|321163710|gb|ADW69415.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
          Length = 375

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 181/336 (53%), Positives = 229/336 (68%), Gaps = 8/336 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L+ +  K  DP +W +   ++ LMR+R+ L+  ++   E+  R  D     ELA E +D 
Sbjct: 32  LAIVEEKIADPTVWADAARSQPLMRDRKRLETLLADDAELARRSDDIEAYFELAKEGEDT 91

Query: 83  SILQETSDNLQRIKLEVEYK-QFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
                  D ++ I   VEY  Q ES  +LSGE D  +A + VH GAGGTESQDWA ML+R
Sbjct: 92  E-----PDLVREIPALVEYADQLESKTMLSGETDLLNAIVTVHPGAGGTESQDWAEMLMR 146

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RW E+++FK E  EI DG+EAGIKSAT  I G  A+G L GE GVHRLVRISP+DS 
Sbjct: 147 MYIRWGERQRFKVEINEIQDGDEAGIKSATFTISGEFAFGLLSGETGVHRLVRISPFDSA 206

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            RRHTSF+S++V P +DD+I I+I   D RIDTYR+ G GGQHVNTTDSAVRITH+PTG+
Sbjct: 207 KRRHTSFASVFVSPEIDDTIVIDIKVEDLRIDTYRSGGKGGQHVNTTDSAVRITHLPTGL 266

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           V  CQ ERSQHKNK +A  M+R+KLYE EL K++      E SK EIG+G QIRSYVLQP
Sbjct: 267 VTGCQNERSQHKNKERAMKMMRSKLYEYELDKKKAATRKIEDSKLEIGFGSQIRSYVLQP 326

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y+M KDLRT +E      VLDGDL+ F++  L +++
Sbjct: 327 YRMAKDLRTRVEVGDVDKVLDGDLEPFIRGFLRMRR 362


>gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
 gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
          Length = 375

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 177/333 (53%), Positives = 229/333 (68%), Gaps = 2/333 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L+ +  ++ DP +W +   ++ LMRER+ L+  +S   +++ R  D     EL  E ++ 
Sbjct: 32  LARIEEQSSDPAIWADPARSQPLMRERKRLEGLLSDDADLERRSGDIDAYFELGREGENV 91

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
               E +  +  I+  +E  +  ++LS E D  +A + VH GAGGTESQDWA ML+RMY 
Sbjct: 92  E--PELAREIASIEQAIEKLESRTMLSEETDPLNAIVTVHPGAGGTESQDWAEMLMRMYL 149

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RW E++ FKTE  EI DG+EAGIKSAT  I G  AYG L GE GVHRLVRISP+DS  RR
Sbjct: 150 RWGERQGFKTEINEIQDGDEAGIKSATFTITGDFAYGLLSGETGVHRLVRISPFDSAKRR 209

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSFSS++V P +DDSI I+I   D RIDTYR+ G GGQHVNTTDSAVRITH+PTG+V  
Sbjct: 210 HTSFSSVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVNTTDSAVRITHLPTGIVAG 269

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQHKNK +A  MLR++LYE EL K++ I+   E SK EI +G QIRSYVLQPY+M
Sbjct: 270 CQNERSQHKNKDKAMKMLRSRLYEFELDKKKAISRKLEDSKLEINFGSQIRSYVLQPYRM 329

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            KDLRT +E      VLDGDL+ F++  L +++
Sbjct: 330 AKDLRTRVEVGDVDRVLDGDLEPFIRGFLRMRR 362


>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
 gi|166225114|sp|A6Q582|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
          Length = 368

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/351 (49%), Positives = 234/351 (66%), Gaps = 4/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL +++  +  +   D   +RL  +      P  W +  +A  + +E+  L   +   +E
Sbjct: 12  KLEQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D   L E+A EE+D   L    +    ++ +V   + E++LSGE D  +A + +
Sbjct: 72  ARSSVEDAKDLFEMATEEEDTETLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAIVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+  FK E L+  +GEEAGIK  + +IKG NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN+RRHTSF+S+ V P VDD I I I + D R+DTYRASGAGGQ
Sbjct: 192 KAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDINIVIEDKDIRVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
           HVN TDSA+RITHIPTG+VVQCQ +RSQHKN+A A  ML+++LYELEL+ KR E   I  
Sbjct: 252 HVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQEGI-- 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             K++IGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L
Sbjct: 310 -EKSDIGWGHQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVL 359


>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 330

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 229/320 (71%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A+EEDD S+  E  + 
Sbjct: 3   DPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIKEY 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++ I+  VE ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  F 
Sbjct: 63  VKAIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSGFS 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG KS+T LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V
Sbjct: 123 IELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ +
Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  +LRAKL+ELEL+K+ EI      +   I WG QIRSYV  PY +VKD RTN+E
Sbjct: 243 NREQALRLLRAKLFELELEKQAEIKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTNVE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DG+LD F++  L
Sbjct: 303 TGNVQAVMDGNLDQFIEGFL 322


>gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium]
          Length = 364

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 176/349 (50%), Positives = 239/349 (68%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++ + L    D +    RL  +  + E+P +W N  EA+ L +E+  L+         
Sbjct: 13  LTQRSSALSAHLDLEEKQGRLEEVLLEMENPDIWSNPDEAQALGQEKSKLELICQTFARA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLE+A  E+D   +     +L  ++L +E  +FE + SGE D+N AYL++ 
Sbjct: 73  NSILEDAKELLEMAQSENDKDTVNSVIGDLNTVELSIEKLEFERMFSGELDANSAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA M+LRMY RW EK KFK + +E+  GE AGIKSAT+   G  A+GWL+
Sbjct: 133 SGSGGTEAQDWAEMILRMYLRWGEKHKFKVKLMEVSAGEVAGIKSATIHFNGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+++N +RHTSFSS++V P +DD+IEI I+ SD RIDTYRASGAGGQH
Sbjct: 193 SEIGIHRLVRKSPFNANGKRHTSFSSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT  VVQCQ  RSQH NK QA   L++KLYELE+Q+R +     E +
Sbjct: 253 VNKTESAVRITHLPTNTVVQCQDGRSQHANKDQAMKQLKSKLYELEMQERNKEKQDLEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E T+  DVLDG+LD F++A+L
Sbjct: 313 KSDIGWGHQIRSYVLDQSR-IKDLRTGVESTNTQDVLDGNLDKFIEASL 360


>gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
 gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
          Length = 310

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 170/307 (55%), Positives = 223/307 (72%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N ++ +  +  +L D   LL+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVLNVLDRLSTQLEDAQALLDLAVEADDESLLEDVQAELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + +   D N  YLE+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AG
Sbjct: 61  RRMFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRMYLRWIERHGFKAEVMEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEIEI+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+ KR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
 gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
          Length = 330

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 229/320 (71%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ + +E   L NA+   K++   + D  ++LE+A+EEDD S+  E  D 
Sbjct: 3   DPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIKDY 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q+I+  VE ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  F 
Sbjct: 63  VQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKAGFS 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG KSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V
Sbjct: 123 IELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ +
Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRSQMQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT +E
Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTGVE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DG+LD FM+  L
Sbjct: 303 TGNVQSVMDGNLDQFMEGFL 322


>gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
 gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
          Length = 375

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 175/354 (49%), Positives = 238/354 (67%), Gaps = 4/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D D  VQ ++ L      P  W ++  ++ ++++   L N I+  ++I
Sbjct: 19  LKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRLKNTIAEFEKI 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   L+E A EEDD S   E   NL+ I+ +V+ ++  +LLSGE D+N+A L  H
Sbjct: 79  ESLYEDTQTLVEFAFEEDDESCSDEVKANLKSIQDQVDAQRLATLLSGEYDANNAILTFH 138

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DW  ML RMY+ WAE+  F+T+ L+  +GEEAGIKS ++LI G NAYG+LK
Sbjct: 139 AGAGGTEAMDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISILIVGTNAYGFLK 198

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+DS+ RRHTSF+S+ V P VDDSIE+EI   D R+DTYR+SGAGGQH
Sbjct: 199 SETGVHRLVRVSPFDSSGRRHTSFASLEVIPEVDDSIEVEIRPEDLRVDTYRSSGAGGQH 258

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-- 300
           VN T+SA+RITH+PTG+V  CQ ERSQ +N+A A  ML++KL  +E+++RE +  I +  
Sbjct: 259 VNKTESAIRITHLPTGIVTACQNERSQMQNRAVAMKMLKSKL--IEIKEREHLDKISDIK 316

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + EI WG QIRSYV  PY +VKD RT  E  + S V+DGDLD F+ A L  K
Sbjct: 317 GEQKEIAWGSQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINAYLVAK 370


>gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 349

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 167/342 (48%), Positives = 245/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL+ +N+  EDP +W +  +A+ L +E++ LD  ++ + ++   +   
Sbjct: 5   FGGIFDFDVKSRRLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNITGA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           + L ++A EE D   +     ++Q     +   +F  +   E DS + ++++ AGAGGTE
Sbjct: 65  IELFDMAKEESDFETIAAIEQDVQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+ML R Y ++ E++ +KTE LE  DG+ AGIKSAT+ + G  AYG L+ E GVHR
Sbjct: 125 ACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS++ RHTSF+SI+VYP +DDSIEI+++ +D R DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E+QKR    +  E+SKT++GWG
Sbjct: 245 VRLTHLPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 305 HQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 345


>gi|56459931|ref|YP_155212.1| protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
 gi|56178941|gb|AAV81663.1| Protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
          Length = 351

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 182/342 (53%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D  ++RL  +  + E P++W +  +A+ L +ER  L+  +  + ++Q  L D 
Sbjct: 7   LGGIFDYDAKLERLEEVTREMEQPNVWDDPPKAQALGKERAALEQVVQTLDKLQQGLDDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L++LA+E +D     E  + L  +  ++E  +F  + S + DS D YL++ +G+GGTE
Sbjct: 67  EGLVDLAVEAEDEDTFNEAHEELSGLVKQLEALEFRRMFSKDNDSADCYLDIQSGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RWAE   FK E  E+ +G+ AGIKSAT+ + G  AYGWL+ E GVHR
Sbjct: 127 AQDWANMLLRMYLRWAEAHDFKAEITELSEGDVAGIKSATVRVVGEYAYGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++VYP VDD I+IEI  SD R+DTYRASGAGGQHVN TDSA
Sbjct: 187 LVRKSPFDSGNRRHTSFASVFVYPEVDDDIDIEIDPSDLRVDTYRASGAGGQHVNRTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQHKN+  A   L+AKLYE ELQK+ E     E SK +IGWG
Sbjct: 247 VRLTHEPTGIVVQCQSDRSQHKNRDSAMKQLKAKLYEFELQKQNEEKQALEDSKADIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT IE  +   VLDG LD F++A+L
Sbjct: 307 SQIRSYVLDDAR-IKDLRTGIENRNTQAVLDGALDPFIEASL 347


>gi|299768411|ref|YP_003730437.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
 gi|298698499|gb|ADI89064.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
          Length = 310

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 167/307 (54%), Positives = 225/307 (73%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSAAEDELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRA+L
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 RFIEASL 306


>gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
 gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
          Length = 349

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 172/341 (50%), Positives = 240/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+     +L  +N + EDP +W +  +A+ L +E++ L+N +  +  I+  L D  
Sbjct: 6   GGIFDFAAKSDKLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDAA 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A EE D   L+   D+   +  ++E  +F  + S   D  + ++++ AGAGGTE+
Sbjct: 66  ELFEMAKEEQDDDTLKAVDDDTLELLDQIEKLEFRRMFSNPMDPCNCFIDIQAGAGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+M+LR Y R+ E++ F    LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHRL
Sbjct: 126 QDWASMILRQYLRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS++ RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 186 VRKSPFDSSNGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VVQCQ +RSQH+N+A AW ML+++L+ELEL+KR       E SKT++GWG 
Sbjct: 246 RLTHAPTGIVVQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWGH 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN E  +   VLDGDLDDF+  +L
Sbjct: 306 QIRSYVLDNSR-IKDLRTNHETGNTKAVLDGDLDDFILESL 345


>gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
 gi|81666133|sp|Q7VIE6|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
          Length = 366

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 169/321 (52%), Positives = 224/321 (69%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           +D H W +   A  + ++++  +  +      +  + D L L E+A+ E+D   L+   +
Sbjct: 41  QDEHFWNDSKRAAEVAKQKRKCERMLQTYTNTKQEIDDALELYEIAMSEEDSRTLELLFE 100

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
               +   ++  + E +LSGE D ++A + +  GAGGTESQDWA++L RMY RW+E+R F
Sbjct: 101 QAPSLLSHIQKVEIEVMLSGENDGSNAIITIQPGAGGTESQDWASILYRMYLRWSERRGF 160

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+  DGEEAGIK    +IKG NAYG+ K E GVHRLVRISP+D+N++RHTSF+S+ 
Sbjct: 161 KVELLDYQDGEEAGIKGVAFIIKGENAYGYAKSENGVHRLVRISPFDANAKRHTSFASVQ 220

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD I IEI + D RIDTYRASGAGGQHVN T+SA+RITH PTG+VVQCQ +RSQH
Sbjct: 221 VSPELDDDINIEIEDKDIRIDTYRASGAGGQHVNKTESAIRITHFPTGIVVQCQNDRSQH 280

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNKA A  ML++KLYELELQK +E A+     K+EIGWG QIRSYVL PYQ VKDLRT  
Sbjct: 281 KNKATAMKMLKSKLYELELQKNQEGAS---QEKSEIGWGHQIRSYVLAPYQQVKDLRTQF 337

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
             +  S VLDGD+D+ +++ L
Sbjct: 338 ATSDTSGVLDGDIDEIIESVL 358


>gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
 gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
          Length = 310

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 173/291 (59%), Positives = 218/291 (74%), Gaps = 3/291 (1%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +++D L D L++ EL    D+   + E  D ++    E+E  + E+LLSGE DSN+A + 
Sbjct: 16  KLKDNLDDILVMFELI---DEGEEMDELPDTIEAFGKELEKFKLETLLSGEYDSNNAIIS 72

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA MLLRMYTRWAE++ FK ++L++  G+ AGIKSATLLI+G NAYG+
Sbjct: 73  LHPGAGGTESQDWAEMLLRMYTRWAERKGFKVKSLDLQPGDVAGIKSATLLIEGINAYGY 132

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+  D R+DTYRASGAGG
Sbjct: 133 LKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRASGAGG 192

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T SA+RITHIPTGVVVQCQ ERSQH+NK  A NML+ KL E+  Q+++E  +   
Sbjct: 193 QHVNKTSSAIRITHIPTGVVVQCQNERSQHQNKEVAMNMLKGKLVEIMEQEQKEKLDDVV 252

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++I WG QIRSYV  PY MVKD RTN+E  +   V+DGDLD FM A L
Sbjct: 253 GDYSQIAWGSQIRSYVFHPYNMVKDHRTNVEVGNIQSVMDGDLDQFMNAYL 303


>gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 332

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 173/326 (53%), Positives = 233/326 (71%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + E P +W     A+ L +ER  L+  +  I ++   + D   LLELA+EE+D    
Sbjct: 4   VNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEEDQETF 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  ++ ++E  +F  + SG+ DS+D Y+++ +G+GGTE+QDW +MLLRMY RWA
Sbjct: 64  DEIEPELIELEFKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLLRMYLRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + FKTE +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTS
Sbjct: 124 EAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S ++YP +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ 
Sbjct: 184 FASAFIYPEIDDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQN 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNK QA   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL   + +KD
Sbjct: 244 DRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKD 302

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT IE  +   VLDGDLD F++A+L
Sbjct: 303 LRTGIENRNTQAVLDGDLDKFIEASL 328


>gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
 gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
          Length = 367

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 176/341 (51%), Positives = 242/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+A+EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMAVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|218890021|ref|YP_002438885.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
 gi|218770244|emb|CAW26009.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
          Length = 303

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 224/296 (75%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D N
Sbjct: 5   VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPN 64

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IKG 
Sbjct: 65  NAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGE 124

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+
Sbjct: 125 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRS 184

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   
Sbjct: 185 SGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAA 244

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   E SK++IGWG QIRSYVL   + +KDLRT IE++    VLDGDLD++++A+L
Sbjct: 245 SQALEDSKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 299


>gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114]
 gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114]
          Length = 367

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 176/341 (51%), Positives = 242/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+A+EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMAVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72]
 gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 373

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 237/341 (69%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    +L  +N   EDP +W +   A+ L +E++ L+  +  +++I+ +  D  
Sbjct: 30  GGIFDYDEKSSKLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQSADLK 89

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L +LA  E D    +    +L  ++  V   +F  + S   D N  ++E+ AGAGGTE+
Sbjct: 90  DLFDLADMEGDDDTFEAVEGDLVGLEALVGQLEFRRMFSNPMDPNACFIEIQAGAGGTEA 149

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY R+ EK+ F  E +E  +GE AGIK+ T+   G  AYG+L+ E G+HRL
Sbjct: 150 QDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETGIHRL 209

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 210 VRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 269

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH+NK +A +ML+A+LYELEL+KR+      E +K++IGWG 
Sbjct: 270 RITHQPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDIGWGH 329

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDL+DF+ A+L
Sbjct: 330 QIRSYVLDQSR-IKDLRTGYEVGNTQAVLDGDLEDFIAASL 369


>gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
 gi|123631202|sp|Q47WT4|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
          Length = 365

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 172/350 (49%), Positives = 239/350 (68%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + N L G  D+D   +RL  ++ + E P +W     A+ L +ER  L+  ++ I E
Sbjct: 13  EIRERANLLRGYLDYDVKAERLVEVSRELELPDVWNEPERAQALGKERSSLEEVVNTIVE 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   L+ELA+EE D     +       +   +E  +F  + SGE D+N++YL++
Sbjct: 73  LETGCEDIEGLVELAVEESDQETFDDAEVEADALDKVLEKLEFRRMFSGEQDANNSYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWA ML+RMY RW E   +KTE +E+ DG+ AGIK  T+   G  AYGWL
Sbjct: 133 QSGSGGTEAQDWAEMLMRMYLRWGEAHGYKTEVIEVTDGDVAGIKGCTIKYTGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+IEI+I+ +D RIDT+RASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIEIDINPADLRIDTFRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITH PTG VV CQ +RSQHKN+A A  +L+AKLYE+E+QK+     + E 
Sbjct: 253 HVNKTDSAIRITHEPTGAVVACQADRSQHKNRATAMKLLKAKLYEMEMQKQNSDKQVLED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 GKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFLEASL 361


>gi|157828246|ref|YP_001494488.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932947|ref|YP_001649736.1| peptide chain release factor 2 [Rickettsia rickettsii str. Iowa]
 gi|157800727|gb|ABV75980.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908034|gb|ABY72330.1| bacterial peptide chain release factor 2 (RF-2) [Rickettsia
           rickettsii str. Iowa]
          Length = 285

 Score =  352 bits (904), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 166/279 (59%), Positives = 211/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S W+YP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWIYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|238650499|ref|YP_002916351.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
 gi|238624597|gb|ACR47303.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
          Length = 285

 Score =  352 bits (904), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 167/279 (59%), Positives = 212/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAIIIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGMVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans]
 gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas
           arsenicoxydans]
          Length = 325

 Score =  352 bits (904), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 173/321 (53%), Positives = 232/321 (72%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           EDP +W +   A+ L +E++ L+  +  + ++   L D   L E+A EE+D   +     
Sbjct: 2   EDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIEA 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +   VE  +F  + SG  D+N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ F
Sbjct: 62  DTQELLKTVEGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRYCERKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E LE  DGE AGIK+ATL ++G  AYG L+ E GVHRLVR SP+DS + RHTSFSS++
Sbjct: 122 KVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHTSFSSLF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+TH P+G+VVQCQ +RSQH
Sbjct: 182 VYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQNDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NKA+AW+ML+AKL+ELE++ R       E SKT++GWG QIRSYVL   + +KDLRTN 
Sbjct: 242 RNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIRSYVLDQSR-IKDLRTNF 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDGDLDDF+ A+L
Sbjct: 301 ETGNTKAVLDGDLDDFIAASL 321


>gi|107103215|ref|ZP_01367133.1| hypothetical protein PaerPA_01004284 [Pseudomonas aeruginosa PACS2]
 gi|254236611|ref|ZP_04929934.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|313109107|ref|ZP_07795079.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
 gi|126168542|gb|EAZ54053.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|310881581|gb|EFQ40175.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
          Length = 300

 Score =  352 bits (904), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 224/296 (75%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D N
Sbjct: 2   VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IKG 
Sbjct: 62  NAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+
Sbjct: 122 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRS 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   
Sbjct: 182 SGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAA 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   E SK++IGWG QIRSYVL   + +KDLRT IE++    VLDGDLD++++A+L
Sbjct: 242 SQALEDSKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 296


>gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 364

 Score =  352 bits (904), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL+ +++ +  +   +   +RL  +    +DP  W +   A  + +E+  L++ ++   +
Sbjct: 12  KLTTKVDNIAQIIKPEEIAKRLGEIEAIEQDPEFWNDAKRAAEMQKEKTALNSLLNRYTK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ + D + L E+A  E+D + ++E  ++ QR++  +   +   +LSGE D+ +A + +
Sbjct: 72  AKNVVSDAVDLYEMANAENDETTIEELFNDAQRVEDHITNLEIAMMLSGENDTKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+  FK E L+  +GEEAGIK  + +I G NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERSGFKVEVLDYQEGEEAGIKDVSFIISGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+D+N++RHTSFSS+ V P VDD I+I + + D ++DTYRASGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFSSVMVSPEVDDDIDIVLEDRDLKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITH+PTG+VVQCQ +RSQHKN+A A  ML+++LYELEL+K++  A     
Sbjct: 252 HVNKTDSAIRITHMPTGIVVQCQNDRSQHKNRASAMKMLKSRLYELELEKQQ--AEKDGI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+NI  +  + +LDGD+   ++  L  +K
Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDNRSNIAYSQVNAILDGDISKVIEDVLIAQK 363


>gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 374

 Score =  352 bits (904), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 243/349 (69%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  ++ + E P +W +   A+ L RER  L+  +  I ++
Sbjct: 14  LNDRVLSLRGYLDYDVKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA  E D         +L + +  VE  +F+ + SG+ D  +A++++ 
Sbjct: 74  LAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQMDGANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ I+G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNVERDALEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361


>gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102]
 gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102]
          Length = 367

 Score =  352 bits (903), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 176/341 (51%), Positives = 242/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+A+EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMAVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEDGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2]
 gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira
           crunogena XCL-2]
          Length = 332

 Score =  352 bits (903), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 230/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           EDP +W +   A+ L +E+  LDN ++ I++++  L     +LE+A  + D  ++ E   
Sbjct: 9   EDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMAEMDADQEMVDEVVS 68

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L R++ ++E  +F+ + SGE D+N+ YLE+ AG+GGTE+QDWANM+LRMY RWAE   F
Sbjct: 69  ELARLEEKLEQLEFQRMFSGELDANNCYLEIQAGSGGTEAQDWANMILRMYLRWAESHGF 128

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E LEI  G+ AGIK AT+ ++G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++
Sbjct: 129 KAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVF 188

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P +DDS E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT  V QCQ  RSQH
Sbjct: 189 ISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNTVTQCQNGRSQH 248

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NKA+A   LRAKLYELE+  R       E +K++IGWG QIRSYVL   + +KDLRTN+
Sbjct: 249 QNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWGSQIRSYVLDSGR-IKDLRTNV 307

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + VLDGDLD F+  +L
Sbjct: 308 ETGNTNGVLDGDLDQFIIPSL 328


>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
 gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
           defluvii]
          Length = 377

 Score =  352 bits (902), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 176/341 (51%), Positives = 233/341 (68%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD       L+ +  KT  P  W++   A  + R +  LD  +S  ++ + R  D  
Sbjct: 17  GGIFDLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQNDIE 76

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELALE  D  + QE    L+  +  V   + E LLSGE DS++A   +H GAGGTES
Sbjct: 77  ALLELALESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGTES 136

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE++ FK E L++  G+EAGIKSATL + GP AYG+LK E GVHRL
Sbjct: 137 QDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVHRL 196

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N RRHTSF+S++VYP ++D +++ I + D R+DT+RA GAGGQ+VN  ++A+
Sbjct: 197 VRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVETAI 256

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VVQCQ ERSQ +N+  A  +L+A+L+E+E +K+E   N     K +I WG 
Sbjct: 257 RITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAWGS 316

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYV QPYQMVKD RT  E    S V+DG+LD F++A L
Sbjct: 317 QIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYL 357


>gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 354

 Score =  352 bits (902), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 176/342 (51%), Positives = 245/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E P +W +   A+ L RER  L+  +   + +   L D 
Sbjct: 10  LGGIFDYDLKRERLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDA 69

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLE+A +E D   +     +L   + E++  +F  + SGE D  +A++++ AGAGGTE
Sbjct: 70  DELLEMAADEGDEETVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTE 129

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RW E+  FKTE +E+ +G+EAGIKSAT+  +G  A+GWL+ E G+HR
Sbjct: 130 AQDWANMLLRMYLRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHR 189

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++V P VDD ++I+I+ +D R+D YRASGAGGQHVN T+SA
Sbjct: 190 LVRKSPFDSGNRRHTSFASVFVSPEVDDDVDIDINPADLRVDVYRASGAGGQHVNRTESA 249

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+P+G+VVQCQQ+RSQHKN+A A   L++KL+ELE+QKR + A   E +K++IGWG
Sbjct: 250 VRITHMPSGIVVQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWG 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 310 NQIRSYVLDQSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASL 350


>gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
 gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
          Length = 347

 Score =  352 bits (902), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 175/343 (51%), Positives = 230/343 (67%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           C GG+FD+     RL+ +  +  +P +W     A+ L +ER  L+  +  I ++     D
Sbjct: 2   CSGGIFDYAEKKDRLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  LLE+A+ EDD       + +   +  ++E  +F  + SGE D N+AYL+V +G+GGT
Sbjct: 62  SHDLLEMAVAEDDIDTADMVASDTSDLIAQLEKLEFRRMFSGEMDPNNAYLDVQSGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW  MLLRMY RW E + FK   +E   GE AG+KSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWTEMLLRMYLRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+SI+V P +DD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDS
Sbjct: 182 RLVRKSPFDSGGRRHTSFASIFVSPEIDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH PT  VV CQ ERSQH+NK  A   LRAKLYELE+ KR       E SK +IGW
Sbjct: 242 AVRITHEPTNTVVSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 302 GSQIRSYVLDDAR-IKDLRTQVETRNTQAVLDGDLDKFIEASL 343


>gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
 gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
          Length = 331

 Score =  352 bits (902), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 172/319 (53%), Positives = 227/319 (71%), Gaps = 1/319 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P +W     A+ L +ER  L + +S + E+ + +     L ELA+EEDD    QE    L
Sbjct: 10  PSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGTAQEMIAEL 69

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++  +   +F+ + +GE D N+AYL++ AG+GGTE+QDWA+MLLRMY RW EK  FKT
Sbjct: 70  DAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLRMYLRWGEKHDFKT 129

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+ +GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++VY
Sbjct: 130 GLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVY 189

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+ + +VVQCQ ERSQH+N
Sbjct: 190 PEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNLVVQCQSERSQHQN 249

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           KA A   LRAKLYELE++ R+      E +K +IGWG QIR+YVL   + +KDLRT +E 
Sbjct: 250 KAHAMAQLRAKLYELEMRSRQAEKQAAEEAKADIGWGSQIRNYVLDQSR-IKDLRTGVEI 308

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   VLDGDLD F++A+L
Sbjct: 309 GNTQGVLDGDLDPFIEASL 327


>gi|157825493|ref|YP_001493213.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
 gi|157799451|gb|ABV74705.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
          Length = 285

 Score =  352 bits (902), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 164/279 (58%), Positives = 209/279 (74%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAASENDLETLSQIEQDLKNLSILAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEE GIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMLNGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPAIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDSSWGYQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           Y+L PYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YILHPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|168051671|ref|XP_001778277.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670374|gb|EDQ56944.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 387

 Score =  352 bits (902), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++R ++ +    +W   + R+  L+ +   P+LW+N  +A    RER  L   +  +  +
Sbjct: 32  VARSIDLIKARLEWKKLLARVQELDVELAKPNLWENAAKAGQFSRERGALSGQVKSVISM 91

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA EE+D  ++ + +  L  ++     ++  +LLSGE DS   ++EV 
Sbjct: 92  EDELLEHVGLAELAHEENDTQVVTDVTQGLAELRKTASERELVALLSGEHDSRSCFIEVQ 151

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++RMY  WA+ R ++   ++   GEEAGIK AT+ + G  AYG+ K
Sbjct: 152 AGAGGTESMDWAAMVMRMYRMWAQTRDYEVTVVDEMPGEEAGIKRATIRVDGLYAYGYAK 211

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+D+  RRHTSF+++ V P +D+S + IEI ESD RI+ +RA GAGGQ
Sbjct: 212 TEAGVHRLVRISPFDAGKRRHTSFAAVAVIPALDESEVSIEIGESDLRIERFRAGGAGGQ 271

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRI HIPTG+V QCQ +RSQH+NKA A +ML+++L+++E+ +R +       
Sbjct: 272 HVNKTESAVRIIHIPTGIVTQCQADRSQHRNKATALSMLQSRLHQMEVTRRAKANAQHTQ 331

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S +++ WG QIRSYVLQPYQMVKDLRTN E + PS +LDG++D F+ A LA
Sbjct: 332 SLSDVSWGNQIRSYVLQPYQMVKDLRTNYEVSDPSSILDGEIDGFIMAYLA 382


>gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
 gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
          Length = 367

 Score =  351 bits (901), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 242/338 (71%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  +N   EDP++W +  +A+ L RE++ LD+ +  +  + + L DN  L 
Sbjct: 27  LDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRLTNGLSDNSELF 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E++ EE D   LQ  SD+   ++ +++  +F  + +  AD  +A++++ AGAGGTE+ DW
Sbjct: 87  EMSKEEGDMDGLQSISDDAATLEADIKQLEFRRMFNNPADPLNAFVDIQAGAGGTEACDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y ++AE++ FKT+  +   G+ AGIK AT+ ++G  A+G L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+  RHTSF+SI+VYP +DDSIEI+I+ SD R DT+RASGAGGQH+N TDSAVR+T
Sbjct: 207 SPFDSSGGRHTSFASIFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQHINKTDSAVRLT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E SKT++GWG QIR
Sbjct: 267 HIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363


>gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
 gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
          Length = 367

 Score =  351 bits (901), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 176/350 (50%), Positives = 245/350 (70%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS + + L G  D+++  QRL  +N   EDP +W +  +++ L +E++ L+  ++ +  +
Sbjct: 16  LSERNHALRGYLDFESKSQRLEEVNGLLEDPKIWDDNAKSQALGKEKRTLELVVNTLIHV 75

Query: 63  QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           Q  L D   L E+A EE DD ++L    D+L  ++ E+   +F  + SGE DS + ++E 
Sbjct: 76  QGGLKDAQELFEMAREENDDDTLLSVEHDSLA-LEKEIAEMEFRRMFSGELDSANCFIEF 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANMLLRMY R+ E++ FK E LE  +G+ AGIK A++ + G  AYG L
Sbjct: 135 QSGSGGTEAQDWANMLLRMYLRYCERKGFKVEVLEESEGDVAGIKGASIKVSGDYAYGTL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DSN++RHTSF+S+ ++P VDDSIEI+I+ +D R+DTYRASGAGGQ
Sbjct: 195 RTENGVHRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIEIDINPADLRVDTYRASGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVRITHIPT  VVQCQ +RSQH+N+ +A NML+  LY LEL KR +     E 
Sbjct: 255 HINKTDSAVRITHIPTNTVVQCQNDRSQHRNREEAMNMLKGALYNLELNKRNQEKQALED 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +KT+IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F+  +L
Sbjct: 315 AKTDIGWGHQIRSYVLDQSR-IKDLRTGVEIGNTQGVLDGDLDPFITESL 363


>gi|34580696|ref|ZP_00142176.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
 gi|28262081|gb|EAA25585.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
          Length = 285

 Score =  351 bits (901), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 166/279 (59%), Positives = 210/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
          Length = 344

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 167/343 (48%), Positives = 239/343 (69%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD DN  +RL+ +       + W+N  +A  L++ER  +   +   K +   L +  IL
Sbjct: 1   MFDLDNKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEIL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             LA+EE D   ++E S  +Q++K ++       +L GE D N+A + ++AGAGGTE+QD
Sbjct: 61  YSLAIEESDSKTIEEVSVQIQKLKEKINKLSLLLMLDGEDDINNAIVSINAGAGGTEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W+ +L RMY+RW EK+ FK+  ++   G+EAGIKS T+ ++G  AYG+LK E GVHRLVR
Sbjct: 121 WSEILFRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +RHTSF+S++VYP +D+SIEI+I E D RID +R+SGAGGQHVN T SA+RI
Sbjct: 181 ISPFNANGKRHTSFASVFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VVQCQQERSQHKNK  A ++L+++LY+LE QK+++        K EI WG QI
Sbjct: 241 THLPTGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWGNQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RSYVL PYQ++KD R N+E  + + VLDG +D F++  L  +K
Sbjct: 301 RSYVLHPYQLIKDHRINLETGNAAAVLDGAIDPFIEGVLLSRK 343


>gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
 gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
          Length = 364

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 172/330 (52%), Positives = 227/330 (68%), Gaps = 4/330 (1%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R+  + T  +    W++  +A    +E++  +  +   +E    L D   L E++   DD
Sbjct: 32  RIKEIETLEQQKEFWEDSKKAGEYQKEKKRCERQLEKFQEANLALNDAKELFEIS--SDD 89

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L E       ++ +++  + E +LS E DSN+A   +  GAGGTESQDWA+ML RMY
Sbjct: 90  EQTLNELFSEANSLEEQIKKAEIEVMLSDELDSNNAIFTITPGAGGTESQDWASMLYRMY 149

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE+R FK E L+  +G+EAGIK A+ +IKG NAYG+ K E G+HRLVRISP+DSN++
Sbjct: 150 LRWAERRGFKVELLDYQEGDEAGIKDASFIIKGENAYGYAKVENGIHRLVRISPFDSNAK 209

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ V P +DD+IEIEI E D RIDTYRASGAGGQH+N T+SA+RITHIPTG+VV
Sbjct: 210 RHTSFASVQVTPEIDDNIEIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGIVV 269

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ +RSQHKNKA A  ML++KLYELE QKR E        K+EIGWG QIRSYVL PYQ
Sbjct: 270 QCQNDRSQHKNKATALKMLKSKLYELEAQKRNE--QTSNDDKSEIGWGHQIRSYVLAPYQ 327

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +KDLR+NI  ++   +LDGD+D  ++  L
Sbjct: 328 QIKDLRSNIAYSNVEAILDGDIDAILEGVL 357


>gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
 gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
          Length = 328

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 224/321 (69%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E   L   +   K++ +   D  +  EL  EEDD  +  E    
Sbjct: 3   DPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELESG 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +K ++   + + LLS   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEKR F 
Sbjct: 63  LAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKRGFA 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+++IE++  D +IDTYRASGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQ K
Sbjct: 183 MPELDDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+ QA  M++AKLY+L ++++E E+A I    + EIGWG QIRSYV  PY MVKD RT  
Sbjct: 243 NREQAMKMMKAKLYQLRIEEQERELAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTGF 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + V+DG++D F+ A L
Sbjct: 302 EIGNTNSVMDGEIDGFIDAYL 322


>gi|330504612|ref|YP_004381481.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
 gi|328918898|gb|AEB59729.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
          Length = 304

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 169/300 (56%), Positives = 222/300 (74%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  I ++   L D+  LLE+A EE+D   + +    ++R++  +E  +F  + SGE
Sbjct: 2   LAQIVETIDDLTGSLADSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+ YL++ AG+GGTE+QDWAN+LLRMY RWA+KR F  E +E+ +GE AGIK AT+ 
Sbjct: 62  MDANNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL   + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDGYLEASL 300


>gi|317493835|ref|ZP_07952252.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918162|gb|EFV39504.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 320

 Score =  351 bits (901), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 175/317 (55%), Positives = 224/317 (70%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L+  ++ I ++   L D   LLELA+E DD     E    L +
Sbjct: 1   MWNEPERAQALGKERSSLEEIVNTINQMTQGLDDVSGLLELAIEADDEETFNEAVVELDQ 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  ++   +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRM+ RWAE + FKTE 
Sbjct: 61  LDAKLAQLEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWASMLLRMFLRWAEAKGFKTEI 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E  DGE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP 
Sbjct: 121 IEESDGEVAGLKSATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK 
Sbjct: 181 VDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   L+AKLYE E+QK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QAMRQLKAKLYEYEMQKKNAEKQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDRFIEASL 316


>gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
 gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
          Length = 351

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 181/346 (52%), Positives = 242/346 (69%), Gaps = 2/346 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +GGLFD +   + ++  N +  +P  W +  +A+ ++ E   L    +  K++     + 
Sbjct: 1   MGGLFDLETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEEL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            +LLE+  EE+D  +++E    +     +++  + E LLS   D N+A +E+H GAGGTE
Sbjct: 61  DLLLEMVKEENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDW N+LLRMYTRWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 121 SQDWGNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF SI V P +DDS++I+I+  D ++DTYRASGAGGQH+NTTDSA
Sbjct: 181 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKVDTYRASGAGGQHINTTDSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           VRITH+PTGVVV  Q +RSQ KN+ QA +ML+AKL++LE+++ E E+A I    + EIGW
Sbjct: 241 VRITHMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAI-RGEQLEIGW 299

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV  PY MVKD RTN E  + S V+DG +D F++A L  K
Sbjct: 300 GSQIRSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLRSK 345


>gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
 gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
          Length = 365

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/348 (53%), Positives = 245/348 (70%), Gaps = 2/348 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           SRQ + L G  D+D   +RL+ +  + EDP +W N   A+ L +ER  L+  ++ + EI 
Sbjct: 16  SRQ-DALRGYLDFDTKQERLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEIA 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D   LL+LA+EEDD   ++  + +L   +  V   +F  + SGE D N+A+L++ A
Sbjct: 75  AGIDDAAELLQLAVEEDDEDSVESVAADLAHYESVVAEMEFRRMFSGEMDPNNAFLDIQA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA ML RMY RW E++ FKTE +E   GE AGIKSAT+  +G  AYGWL+ 
Sbjct: 135 GSGGTEAQDWAQMLERMYLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLRT 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I+I+I+ +D R D YRASGAGGQHV
Sbjct: 195 ETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIDINPADLRTDVYRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITH+PTG+VVQCQ +RSQH N+      LRAKLYELE+QKR       E SK
Sbjct: 255 NRTESAVRITHLPTGIVVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDSK 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++IGWG QIRSYVL   + +KDLRTN+E  +P  VLDGDLD F++A+L
Sbjct: 315 SDIGWGSQIRSYVLDQSR-IKDLRTNVETGNPQAVLDGDLDMFIEASL 361


>gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 367

 Score =  350 bits (899), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 175/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 333

 Score =  350 bits (899), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 173/323 (53%), Positives = 231/323 (71%), Gaps = 2/323 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W NV E++ +M+E + L   +    +++ +  D   L+++A E++D  +++E + 
Sbjct: 2   EEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEEDEDADLIEEATA 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +   +   E  +  +LL+GE D +DA L +HAGAGGTES DWA ML RM+TRWA K+ +
Sbjct: 62  LMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE L+  DG+EAGIKS T+ I G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S  
Sbjct: 122 GTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D IE+EI++ D RIDTYRASGAGGQH+N TDSA+RITH+PTG+VVQCQ ERSQH
Sbjct: 182 VMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KNK QA  ML+ KLY L+ Q+  E++++I      + GWG QIRSYVLQPY MVKD RTN
Sbjct: 242 KNKDQAMKMLKTKLYLLKQQQHLEKLSDI-RGDVGDNGWGNQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +PS VLDGDLD FM A LA
Sbjct: 301 FESGNPSAVLDGDLDGFMNAYLA 323


>gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
 gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
          Length = 310

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 168/307 (54%), Positives = 223/307 (72%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ ++ +  +L D   +L+LA+E DD S+L +    L   +  +   +F
Sbjct: 1   MAKEKGELENVINVLEGLSTQLEDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH+PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+ KR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
 gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
          Length = 367

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 175/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB]
 gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB]
          Length = 351

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 238/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P++W     A+ L +ER  L+  +  + ++   L D 
Sbjct: 7   FGGIFDYDAKKERLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 67  QGLLELAVEAEDEETFDEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 307 SQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 347


>gi|302342486|ref|YP_003807015.1| LigA [Desulfarculus baarsii DSM 2075]
 gi|301639099|gb|ADK84421.1| LigA [Desulfarculus baarsii DSM 2075]
          Length = 371

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/350 (49%), Positives = 234/350 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L  +    D ++  +RL+ L+        W++   AK +MRER  L  ++  +  
Sbjct: 7   ELRQRLGVIQEYLDPESKTKRLAELDKIVGANDFWEDQNAAKAVMRERTDLAQSLEELDA 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D  +LLELA+EEDD S+  E       ++ ++   +   LL G  D   A L +
Sbjct: 67  LNRSMEDAEVLLELAVEEDDASLTAEIDQAHDALERQIGRLEAARLLGGPDDHRGAILAI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGG ++QDWA ML R+Y R+AE++ F+   L+   G+EAG+KS T+ I GP AYG L
Sbjct: 127 NAGAGGADAQDWAQMLTRLYGRYAERQGFQVVELDFQAGDEAGVKSVTMEINGPRAYGLL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D++ RRHT+F+S++V P VDD IEIE+ ++D RIDTYRASGAGGQ
Sbjct: 187 KGESGVHRLVRISPFDASHRRHTAFASVYVSPQVDDDIEIEVKDADIRIDTYRASGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVRITH PTGVVVQCQ E+SQH+NK  A  +LRA+LYELE+ KRE       +
Sbjct: 247 HVNKTSSAVRITHFPTGVVVQCQNEKSQHRNKDMAMKVLRARLYELEIHKREAEKREVHA 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           S  EI WG QIRSYVL PY++VKD RT +E  +   VLDG LDDF++  L
Sbjct: 307 SHQEIAWGSQIRSYVLAPYRLVKDHRTGVEVGNVDSVLDGQLDDFIQGYL 356


>gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
 gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
          Length = 350

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 181/347 (52%), Positives = 237/347 (68%), Gaps = 3/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  LGGLFD +     +        DP  W +  +A+ ++ +   L + +     +++ L
Sbjct: 1   MTVLGGLFDLEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            ++ +L E+  EE D    QE  + L  ++      + + LLSGE D+N+A LE+H GAG
Sbjct: 61  ENSEVLFEMYKEESDEDTHQELIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDW  MLLRMY R+A+K+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+G
Sbjct: 121 GTESQDWGEMLLRMYQRFADKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNT 245
           VHRLVRISP+DS+ RRHTSF S  V P  D D+IEIEI+  D +IDTYRASGAGGQHVNT
Sbjct: 181 VHRLVRISPFDSSGRRHTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNT 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKT 304
           TDSAVRITH PTG+VV CQ ERSQ KN+ QA  ML+AKLY+ +++++E E+A I    + 
Sbjct: 241 TDSAVRITHQPTGIVVTCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAI-RGEQK 299

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           EIGWG QIRSYV  PY MVKD RTN+E  + + V+DGD+D F+ A L
Sbjct: 300 EIGWGSQIRSYVFHPYSMVKDHRTNVETGNTNAVMDGDIDLFIDAYL 346


>gi|224419024|ref|ZP_03657030.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
          Length = 363

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 176/331 (53%), Positives = 230/331 (69%), Gaps = 6/331 (1%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R+  + +  +    W++  +A    +E++     +   KE    L D   L EL+   DD
Sbjct: 32  RIEEIESLEQQKEFWEDSKKAGEYQKEKKRCLRQLEKYKEASLALSDAKELFELS--SDD 89

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L E  +    ++ +++  + E +LSGE DSN+A   +  GAGGTESQDWA+ML RMY
Sbjct: 90  EETLNELFNEAPMLEEQIKKAEIEVMLSGELDSNNAIFTITPGAGGTESQDWASMLYRMY 149

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE+  FK E L+  +G+EAGIK A+ +IKG NAYG+ K E G+HRLVRISP+DSN++
Sbjct: 150 LRWAERCGFKVELLDYQEGDEAGIKDASFIIKGENAYGYTKVENGIHRLVRISPFDSNAK 209

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ V P +DD+I IEI E D RIDTYRASGAGGQH+N T+SA+RITHIPTG+VV
Sbjct: 210 RHTSFASVQVTPEIDDNISIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGIVV 269

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPY 320
           QCQ +RSQHKNKA A  ML++KLYELE QKR E+IAN     K+EIGWG QIRSYVL PY
Sbjct: 270 QCQNDRSQHKNKATALKMLKSKLYELEQQKRNEQIAN---DDKSEIGWGHQIRSYVLAPY 326

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Q VKDLR+NI  ++   +LDGD+D  ++  L
Sbjct: 327 QQVKDLRSNIAYSNVEAILDGDIDSILEGVL 357


>gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
 gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
          Length = 325

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P +W     A+ L +ER  L+  ++ I ++     D   LLELA+E +D     E   
Sbjct: 2   EQPDVWNEPERAQALGKERAALEAIVATIDQLAQGGEDVNGLLELAVEAEDEETFNEAVI 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L ++ +++E  +F  + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + F
Sbjct: 62  ELDQLMVKLERLEFCRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE +E  DG+ A +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS++
Sbjct: 122 KTEVIEESDGDVARLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +YP VDD I++EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQH
Sbjct: 182 IYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK QA+  LRAKLY+ E+QK+       E +K++IGWG QIRSYVL   + +KDLRTN+
Sbjct: 242 KNKDQAFKQLRAKLYDFEMQKKNADKQTMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTNV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDGDLD F++A+L
Sbjct: 301 ETRNTQAVLDGDLDKFIEASL 321


>gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
 gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
          Length = 368

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 172/354 (48%), Positives = 244/354 (68%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L+ +G   +     ++++ L  K  +P  W +  +A+ + +E   +  ++   K 
Sbjct: 11  ELKTKLDQMGESLEVPAKEEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L E+ +EE D S+ ++    L  +   +E  Q E LLSG  D+N+A L +
Sbjct: 71  LVAKFEDAQTLWEMGMEEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+L
Sbjct: 131 HAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G+HRLVRISP+D+ +RRHTSF++  + P +DD++E+ I+ SD R+DTYRASGAGGQ
Sbjct: 191 RSEKGIHRLVRISPFDAQARRHTSFAACDIMPEIDDNVEVNINMSDVRVDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300
           H+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q   MLRAKL+ELE++K+E E+A + E
Sbjct: 251 HINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKL-E 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + +I WG QIRSYV QPY MVKD RTN+E  +   V+DGD+D F++A LA K
Sbjct: 310 GDQQKIEWGSQIRSYVFQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363


>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 370

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/344 (50%), Positives = 237/344 (68%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N L  +   +   + +  L+++  DP+ W +  +A+ +  +R +L   +  I +I  ++ 
Sbjct: 18  NNLKDILKPEKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILKIDKKVK 77

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D    ++L   E D S+  E    +  ++ E+E  +  SLLS E DS +A L + AG+GG
Sbjct: 78  DLQDYIQLLEMEKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTLQAGSGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+ DW  ML+RMY RWAE + F+ E ++    + AGIKSAT++IKGP AYG+LKGEQGV
Sbjct: 138 VEACDWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYLKGEQGV 197

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+N RRHTSF+++ V P +D+ I++EI+E D RIDT+RASGAGGQHVN TD
Sbjct: 198 HRLVRISPFDANKRRHTSFAAVSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQHVNKTD 257

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LELQK++E     E  K +I 
Sbjct: 258 SAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEGEKKDIT 317

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV QPYQMVKDLRT  E  +   V+DGD+D F+++ L
Sbjct: 318 WGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYL 361


>gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71899474|ref|ZP_00681632.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12]
 gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12]
          Length = 338

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 170/326 (52%), Positives = 235/326 (72%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  + E P +W     A+ L RER  LD  ++ I  + + + +    L+LA  E D  +L
Sbjct: 1   MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           Q   +++   +L+VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA MLLRMY RWA
Sbjct: 61  QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R +K E LE+  GE AGIKSAT  ++G  AYGWLK E GVHRLVR SP+DS++RRHTS
Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ 
Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH N+ +A  ML AKLYE E+QKR    ++ E+SK++IGWG QIR+YVL   + +KD
Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLDQSR-IKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT +E++    VLDGDLD+F++A+L
Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASL 325


>gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c]
 gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c]
          Length = 338

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 170/326 (52%), Positives = 235/326 (72%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  + E P +W     A+ L RER  LD  ++ I  + + + +    L+LA  E D  +L
Sbjct: 1   MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           Q   +++   +L+VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA MLLRMY RWA
Sbjct: 61  QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R +K E LE+  GE AGIKSAT  ++G  AYGWLK E GVHRLVR SP+DS++RRHTS
Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ 
Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH N+ +A  ML AKLYE E+QKR    ++ E+SK++IGWG QIR+YVL   + +KD
Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLDQSR-IKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT +E++    VLDGDLD+F++A+L
Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASL 325


>gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
 gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
          Length = 367

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 238/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 87  EMTVEENDEEGFAAVQEDVAELEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
 gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
          Length = 353

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 181/347 (52%), Positives = 243/347 (70%), Gaps = 2/347 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD +N  + ++  N +  +P  W++  +A+ ++ E   L    +   ++     D
Sbjct: 2   VLGGLFDLENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +LLE+  EE+D  + +E +  +     +++  + + LLS   D N+A +E+H GAGGT
Sbjct: 62  LELLLEMVKEENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDW ++LLRMYTRWAEKR FK E L    G+EAGIKS TLLIKG NAYG+LK E+GVH
Sbjct: 122 ESQDWGSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF SI V P +DDS++I+I+  D +IDTYRA+GAGGQH+NTTDS
Sbjct: 182 RLVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKIDTYRATGAGGQHINTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           AVRITHIP+GVVV  Q +RSQ KN+ QA +ML+AKLY+LE++++E E+A I    + EIG
Sbjct: 242 AVRITHIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAI-RGEQLEIG 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RTN E  + + V+DG +D F++A L  K
Sbjct: 301 WGSQIRSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSK 347


>gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2]
 gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas
           naphthalenivorans CJ2]
          Length = 347

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 166/341 (48%), Positives = 241/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    ++L+ +N   EDP +W N   A+ L RE++ L++ +  +  ++  L DN 
Sbjct: 4   GGIFDYPAKARKLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNT 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ +++D + ++       ++  EVE  +F  + +  AD  + +L++ AGAGGTE+
Sbjct: 64  ELFEMSKDDNDEAGMRAIEGEAAKVAAEVEKMEFRRMFNNPADPLNCFLDIQAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++AE++ FKT   +   G+ AGIK AT+ I+G  A+G L+ E GVHRL
Sbjct: 124 CDWASMLLRQYLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP +DDSIEI+I+ +D R DTYRASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQCQ+ RSQH N+  AW  LR++LY+ EL+K++E     E +KT++GWG 
Sbjct: 244 RLTHIPTGIVVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN E ++   VLDGDLD F++A+L
Sbjct: 304 QIRSYVLDNSR-IKDLRTNYETSATQKVLDGDLDPFIEASL 343


>gi|308187994|ref|YP_003932125.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
 gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
          Length = 351

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 238/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  ++++   L D 
Sbjct: 7   FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 67  QGLLELAVEAEDEETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 307 SQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 347


>gi|77918851|ref|YP_356666.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
 gi|77544934|gb|ABA88496.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           carbinolicus DSM 2380]
          Length = 326

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/319 (54%), Positives = 232/319 (72%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W++  +A+ +++ER  L+  ++  +E Q  L D  +L +L  E  D + L+E S  L
Sbjct: 4   PGFWESGDQAQDILKERTGLEKLVTSFRESQQELEDLQLLADLGAESGDEATLEEISALL 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++  V+  +F  +LSGE DS DA   ++AGAGGTE+QDWA+MLLRMY R+ EK+ FK 
Sbjct: 64  PDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRMYMRYFEKKGFKA 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E  +   G+EAGIK ATL + G  AYGWL+ E G+HRLVRISP+DSN+RRHTSF S++V+
Sbjct: 124 ELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNARRHTSFCSVFVF 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P + D +E++I+E D ++DTYR+SGAGGQHVN TDSA+RITH+P+G+VV CQ ERSQHKN
Sbjct: 184 PELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGIVVACQNERSQHKN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +A A   L+A+LYELEL+K+EE A+     K EIGWG QIRSYVL PY+MVKD RTN E 
Sbjct: 244 RATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWGSQIRSYVLHPYRMVKDHRTNFES 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   VLDGDLD F++A L
Sbjct: 304 GNADAVLDGDLDGFIEAYL 322


>gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275]
 gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
 gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
          Length = 367

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
 gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
          Length = 330

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 166/320 (51%), Positives = 231/320 (72%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A++EDD S+  E  + 
Sbjct: 3   DPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIKEY 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +++I+  +E ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  F 
Sbjct: 63  VKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSGFS 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V
Sbjct: 123 IELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ +
Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT++E
Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTSVE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DG+LD F++  L
Sbjct: 303 TGNVQAVMDGNLDPFIEGFL 322


>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
 gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
          Length = 330

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 166/320 (51%), Positives = 231/320 (72%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A++EDD S+  E  + 
Sbjct: 3   DPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIKEY 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +++I+  +E ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  F 
Sbjct: 63  VKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSGFS 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V
Sbjct: 123 IELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ +
Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT++E
Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTSVE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DG+LD F++  L
Sbjct: 303 TGNVQAVMDGNLDPFVEGFL 322


>gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|166225113|sp|A1KWK6|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153]
 gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
           8013]
 gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
 gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
          Length = 367

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|119476451|ref|ZP_01616802.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
 gi|119450315|gb|EAW31550.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
          Length = 364

 Score =  350 bits (897), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 176/344 (51%), Positives = 245/344 (71%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   ++L+ +  +  +P +W +   A+ L ++R  LD  +S I ++   + D 
Sbjct: 20  FGGIFDYDIRKEQLTEVELELGEPAVWDDPGRAQELGKQRAALDIVVSTIDKLTVGVSDV 79

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLE+A+EEDD   + E  + LQ +   +   +F  + SGE D+N+A+LE+ +G+GGTE
Sbjct: 80  AELLEMAVEEDDADTVMEIENELQLLNQHLATLEFRRMFSGEMDANNAFLEIQSGSGGTE 139

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA M+ RMY RW E + F TE +E  DG+ AGIKSAT+   G  A+GWL+ E GVHR
Sbjct: 140 AQDWAEMICRMYLRWGESKGFSTELMEASDGDVAGIKSATIRFSGEYAFGWLRTETGVHR 199

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS SRRHTSF+S++V P +D+ I+IEI+ SD R DTYRASGAGGQHVN TDSA
Sbjct: 200 LVRKSPFDSGSRRHTSFASVFVSPEIDEDIDIEINPSDLRTDTYRASGAGGQHVNKTDSA 259

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH P+G+VVQCQ +RSQH+N+  A   L+AKLYE+E+ KR E A   E +K +IGWG
Sbjct: 260 VRITHEPSGIVVQCQSQRSQHQNRDFAMKQLKAKLYEMEMLKRNEAAQAQEDNKADIGWG 319

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL   Q +KDLRT+++ ++ ++VLDGDLD F++A+L +
Sbjct: 320 SQIRSYVLDD-QRIKDLRTHVQTSNCNNVLDGDLDLFIEASLKM 362


>gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
 gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
          Length = 352

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 12  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 71

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 72  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 129 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 189 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 249 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 309 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 348


>gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica ST-640]
 gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
          Length = 367

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
 gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
          Length = 367

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
 gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
          Length = 310

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 168/307 (54%), Positives = 222/307 (72%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N ++ +  +  +L D   +L+LA+E DD S+L +    L   + E+   +F
Sbjct: 1   MAKEKGELENVLNVLDGLATQLEDAQAMLDLAVEADDESLLADVQAELTSAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+ KR E A   E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
          Length = 347

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 175/342 (51%), Positives = 235/342 (68%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   + +  +  +  DP  W ++ +++ L ++++ L   +   + +  R  D   L
Sbjct: 3   LFDVEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL LEE D SI +E     + +K EVE  +  +LLSG  D N+A L +HAG+GGTE+QD
Sbjct: 63  IELGLEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQD 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWA  + F+ E L+  +GEEAGIKSATLLIKGP AYG+LKGE GVHRLVR
Sbjct: 123 WAEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRLVR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+ + V P ++D IEIEI   D +IDT+RASGAGGQHVN T+SAVRI
Sbjct: 183 ISPFDAAGRRHTSFALVEVIPELEDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++R+E     +    E  WG QI
Sbjct: 243 THLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDLKGEHREAAWGNQI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RSYV QPY +VKD RTN E+ + + V+DG++D F+ A L  K
Sbjct: 303 RSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQK 344


>gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|24638158|sp|Q9JWV4|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
           2594]
          Length = 367

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
 gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
 gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
          Length = 341

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 118 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 177

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 178 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 237

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 238 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 297

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 298 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 337


>gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103]
 gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103]
          Length = 430

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 237/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +    ++   L D 
Sbjct: 86  FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDV 145

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL+LA+E DD     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 146 QGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 205

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 206 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 265

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 266 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 325

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K++IGWG
Sbjct: 326 VRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWG 385

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 386 SQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 426


>gi|119776010|ref|YP_928750.1| peptide chain release factor 2 [Shewanella amazonensis SB2B]
 gi|119768510|gb|ABM01081.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           amazonensis SB2B]
          Length = 364

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 181/345 (52%), Positives = 236/345 (68%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG+FD+D   +RL  +  + E   +W N   A+ L +ER  L+N +  I  +   L
Sbjct: 17  LCSLGGIFDYDAKKERLEEVTRELESSDVWNNPERAQALGKERASLENVVKTIDTLDSGL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EE+D    ++    L  ++  +E  +F  + SG  D +D YL++ +G+G
Sbjct: 77  EDVEGLLELAVEEEDEGTFEDAKAELDELEKSLEDLEFRRMFSGPQDPSDCYLDIQSGSG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA M+LRMY RW E   FK E +E+ DG+ AGIKSAT+   G  AYGWL+ E G
Sbjct: 137 GTEAQDWAEMVLRMYLRWGEAHDFKPELIEVSDGDVAGIKSATIKFTGEYAYGWLRTETG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ +D RID YRASGAGGQHVN T
Sbjct: 197 VHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPADLRIDVYRASGAGGQHVNRT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKLYELELQK+       E +K++I
Sbjct: 257 ESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLYELELQKQNAEKQAAEDAKSDI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 317 GWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 360


>gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0500_22O06]
          Length = 356

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 181/344 (52%), Positives = 236/344 (68%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG FD ++  +RL  L+ +   P  W +  +AK  + E   L   +     +  R+ 
Sbjct: 4   KSLGGTFDLESRQERLRVLDQEMVQPGFWDSPDQAKATIDESNRLKGWVDPWSSLDARVS 63

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +   L+EL  EE+D  +  E +  L  ++ ++E  +  ++L G  D  DA + +H GAGG
Sbjct: 64  ELTALVELLEEEEDADLEAEFTRGLASVEKDLEVLEVRTMLQGGDDHRDALVTIHPGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ESQDWA ML+RMYTRW+E+R F  E L++   EE GIKSATL IKG  AYG+LK E GV
Sbjct: 124 LESQDWAGMLMRMYTRWSERRGFGVEVLDLQSAEEGGIKSATLEIKGECAYGYLKAEGGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D  SRRHTSF+S+++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TD
Sbjct: 184 HRLVRISPFDQQSRRHTSFASVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTG+V  CQQERSQHKN++ A  MLRA LY+  LQ++E    + E++KTEIG
Sbjct: 244 SAVRITHEPTGIVTTCQQERSQHKNRSTAMKMLRAALYQHALQEQERERAVLEATKTEIG 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G QIRSYV QPY MV D RT ++ T+   V+DGDLD F++A L
Sbjct: 304 FGNQIRSYVFQPYTMVNDHRTELKITNVQGVMDGDLDPFIEAYL 347


>gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
 gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
 gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
 gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
 gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
          Length = 341

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 118 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 177

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 178 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 237

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 238 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 297

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 298 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 337


>gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
 gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
          Length = 367

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 238/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 87  EMTVEENDEEGFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110]
 gi|259585247|sp|C5CUX0|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 367

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 245/349 (70%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L    D+D   +RL  +N   EDP++W +  +A+ L RE++ LD+ +  +  +
Sbjct: 16  LSARTADLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ E+ D   LQ  +D+   ++ +++  +F  + +  AD  +A++++ 
Sbjct: 76  TSGLSDNTELYEMSKEDGDMDGLQSIADDAAALETDIKQLEFRRMFNNPADPLNAFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++AE++ FKT+  +   G+ AGIK AT+ ++G  A+G L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+SI+VYP +DDSIEIEI+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E S
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 316 KTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363


>gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1]
 gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium
           petroleiphilum PM1]
          Length = 355

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 170/341 (49%), Positives = 239/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RLS +N   EDP +W +   A+ L RE++ L+  +  I  ++  L DN 
Sbjct: 12  GGIFDYDEKSRRLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNA 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ EE D   L+        +  +VE  +F  + S  AD ++ ++++ AGAGGTE+
Sbjct: 72  ELYEMSKEEGDEDGLRAIEAETLGLAAQVEQLEFRRMFSNPADPSNCFIDIQAGAGGTEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++ E++ FK    +  +G+ AGIKSAT+ ++G  A+G L+ E GVHRL
Sbjct: 132 CDWASMLLRQYLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIEIEI+ +D R DT+RASGAGGQH+N TDSAV
Sbjct: 192 VRKSPFDSSGGRHTSFASLFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E +KT++GWG 
Sbjct: 252 RLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWGH 311

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 312 QIRSYVLDNSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 351


>gi|323143525|ref|ZP_08078205.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
 gi|322416719|gb|EFY07373.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
          Length = 347

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 171/342 (50%), Positives = 236/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD++   +RL  +N   EDP +W +  +A+ L +ERQ L + +S   ++     D 
Sbjct: 3   LGGIFDFETKKERLEEVNGLLEDPQVWNDPEKAQQLGKERQVLSSVVSRFDKLYSGFDDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L+L EL  EE D   ++E      +++  +   +FE + S   D++D Y+++ +G+GGTE
Sbjct: 63  LMLFELGSEEGDEDSIKEAYSEADKLEEVLNALEFERMFSKPNDNSDCYMDIQSGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA M++RMY ++ EK  F    +E  +GE AGIKSATL   GP A+GWL+ E G+HR
Sbjct: 123 AQDWAEMVMRMYLKFGEKHGFDCTVIECSEGEVAGIKSATLKFAGPYAFGWLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSF S +VYP +D+ I++EI+ +D +ID +R+SGAGGQHVN T+SA
Sbjct: 183 LVRKSPFDSNNRRHTSFCSAFVYPEIDNDIKVEINPADLKIDVFRSSGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTGVVV CQ ERSQ +N+ QA   LRAKLYELEL+K++      E SK +IGWG
Sbjct: 243 VRITHIPTGVVVSCQNERSQFQNRDQAMKQLRAKLYELELRKQQSEQQAIEDSKADIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRT +E      VL+GDLD F++A+L
Sbjct: 303 SQIRSYVLDDAR-VKDLRTQVECRDTQRVLNGDLDQFIEASL 343


>gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor
           salsuginis DSM 16511]
 gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor
           salsuginis DSM 16511]
          Length = 372

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 171/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS ++  +  +   +   +RL  +    ++P  W +   A  + +E+  L+  ++   E 
Sbjct: 13  LSTKMENITNIVKPEEIRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D     ELA  E D   L+   D  + +K  ++  +   +LSGE DS +A + +H
Sbjct: 73  KAALEDAQEYFELAKSEGDEETLEMLYDEAENLKEHIQQLEVAIMLSGEHDSANAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RWAE+  FK E L+   GEEAGIK  + +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D+N++RHTSF+S+ V P ++D I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 VENGIHRLVRISPFDANAKRHTSFTSVMVSPEINDDIDIEIEDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A  ML+++LYE E+ K++  A I    
Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKAAAMKMLKSRLYEYEMAKKQ--AEIDGIE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVLQPYQ VKD R+    T+   +LDGD+D  ++  L
Sbjct: 311 KSDIGWGHQIRSYVLQPYQQVKDTRSGQAFTNVEAILDGDIDKLLEGVL 359


>gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|24638159|sp|Q9JXB3|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
 gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
          Length = 367

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 173/341 (50%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ F+ E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090]
 gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945]
 gi|239999963|ref|ZP_04719887.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18]
 gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140]
 gi|240081863|ref|ZP_04726406.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|240114140|ref|ZP_04728630.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|240116780|ref|ZP_04730842.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|240119007|ref|ZP_04733069.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1]
 gi|240122455|ref|ZP_04735411.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|240126695|ref|ZP_04739581.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|240127168|ref|ZP_04739829.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|260441572|ref|ZP_05795388.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|75432344|sp|Q5F5H5|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238693228|sp|B4RQU4|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA
           1090]
 gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945]
 gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 367

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 238/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +E + L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 87  EMAVEENDEEGFAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|190149600|ref|YP_001968125.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245141|ref|ZP_07527233.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249543|ref|ZP_07531530.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255961|ref|ZP_07537758.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258552|ref|ZP_07540288.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260795|ref|ZP_07542482.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307262921|ref|ZP_07544544.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189914731|gb|ACE60983.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853921|gb|EFM86134.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306858398|gb|EFM90467.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861075|gb|EFM93072.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867346|gb|EFM99198.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869521|gb|EFN01311.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871739|gb|EFN03460.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 347

 Score =  348 bits (893), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I+ +   + D 
Sbjct: 3   FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE
Sbjct: 63  EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HR
Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG
Sbjct: 243 VRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 303 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 343


>gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
 gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
          Length = 377

 Score =  348 bits (893), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 171/338 (50%), Positives = 236/338 (69%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D DN ++R+  L+   E+P  W++  ++  +++  ++L + +   +E++ +  D  +++
Sbjct: 25  LDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELERQYEDIGVMI 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+  EE+D S++ E  + L+  K  +E  +  +LLSGE DS++A L ++AGAGGTES DW
Sbjct: 85  EMGNEENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNAGAGGTESCDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             ML RM+ RWAEK+ F  E L+  DGEEAGIKS T+ I GPNAYG+LK E+GVHRLVRI
Sbjct: 145 CGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKSEKGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++  +R TSF S  V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RIT
Sbjct: 205 SPFNAAGKRQTSFVSCDVMPDIEEDLDVEINEEDLRIDTYRSSGAGGQHINKTSSAIRIT 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+  E  +      TEIGWG QIR
Sbjct: 265 HLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDVTEIGWGNQIR 324

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVLQPY MVKD RTN E  +   VLDG LD FM A L
Sbjct: 325 SYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYL 362


>gi|83644616|ref|YP_433051.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
 gi|83632659|gb|ABC28626.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
          Length = 301

 Score =  348 bits (893), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 222/296 (75%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D   LL++A+EE D   + E    L+ I+ +VE  +F  + +GE D N
Sbjct: 3   VKTVDDVTGGLTDCSDLLDMAVEEQDADAVTEVETELESIRAQVETLEFRRMFAGEMDPN 62

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWA++LLRMY RW E+R FKT+ +E   GE AGIKSAT+  +G 
Sbjct: 63  NAYLDIQAGSGGTEAQDWASILLRMYLRWGERRGFKTDLIEESPGEVAGIKSATIHFQGE 122

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS +RRHTSF+S++V P VDD IEI+I+ +D RID YRA
Sbjct: 123 YAYGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEVDDDIEIDINPADLRIDVYRA 182

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITH+P+G+V QCQ +RSQHKNK QA   L+AKLYELE+QKR   
Sbjct: 183 SGAGGQHVNRTESAVRITHMPSGIVTQCQNDRSQHKNKDQAMKQLKAKLYELEIQKRNAE 242

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           A   E SK++IGWG QIRSYVL   + +KDLRT+IE ++   VLDGD+D+F++A+L
Sbjct: 243 AQQLEDSKSDIGWGSQIRSYVLDQSR-IKDLRTSIENSNCQAVLDGDIDEFIEASL 297


>gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas
           albilineans]
          Length = 373

 Score =  348 bits (893), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 179/341 (52%), Positives = 247/341 (72%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD+D   +RL  +  + E P +W +   A+ L RER +L+  +  I  + + L ++L
Sbjct: 21  GGFFDYDAKKERLEEVARELESPDVWNDPERAQGLGRERANLEKTVGGIASVLEGLNESL 80

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA  E+D    Q    ++ R + +VE  +F+ + SG+ DS +A++++ AGAGGTE+
Sbjct: 81  ELLELAESENDEDTAQGVIADVDRFQTQVEKLEFQRMFSGQMDSCNAFVDIQAGAGGTEA 140

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA +LLRMY RW E R +KTE +E+  GE AGIKSATL ++G  AYGWLK E GVHRL
Sbjct: 141 QDWAEILLRMYLRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHRL 200

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS++RRHTSF+S++V P VDD+I+I+I+ +D + D YR+SGAGGQHVN T+SAV
Sbjct: 201 VRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESAV 260

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG 
Sbjct: 261 RITHVPTGIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKSDIGWGS 320

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 321 QIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 360


>gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
          Length = 341

 Score =  348 bits (893), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 173/341 (50%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ F+ E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 118 EDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 177

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 178 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 237

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 238 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 297

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 298 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 337


>gi|312796706|ref|YP_004029628.1| peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI
           454]
 gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia
           rhizoxinica HKI 454]
          Length = 320

 Score =  348 bits (892), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 166/317 (52%), Positives = 233/317 (73%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +  +A+ L RE++ LD  +  +  +   L D   L ELA EE D   L     ++Q 
Sbjct: 1   MWSDSKQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERDVQA 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++  V   +F  + +  AD N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ FK E 
Sbjct: 61  LERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEV 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE  DGE AGIK+AT+ ++G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP 
Sbjct: 121 LEQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VD+SI+I+++ +D RIDT+RASGAGGQH+N TDSAVRITH+P+G+VVQCQ +RSQH+N+A
Sbjct: 181 VDESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNRA 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           +A  ML+++LYE E++KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++
Sbjct: 241 EAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEISN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLDDF+ A+L
Sbjct: 300 TRAVLDGDLDDFISASL 316


>gi|37527422|ref|NP_930766.1| peptide chain release factor 2 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786857|emb|CAE15922.1| Peptide chain release factor 2 (RF-2) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 310

 Score =  348 bits (892), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 173/307 (56%), Positives = 222/307 (72%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  I +++  L D   LLELA+E DD     E    L++++ ++   +F
Sbjct: 1   MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFNEAVVELEQLEEKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DGE AG
Sbjct: 61  RRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+
Sbjct: 121 LKSATIKIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD
Sbjct: 241 YELEMQKKNANKQEMEENKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D]
 gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D]
          Length = 367

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 171/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  ++ + E+P +W +   A+ L RE++ L+  +  + ++ + L     L 
Sbjct: 27  LDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGAAELF 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ AGAGGTE+ DW
Sbjct: 87  ELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEACDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G  A+G+L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS   RHTSFSSI+VYP VDDSIEIEI+ +D R+DTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSAGGRHTSFSSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E++KT++GWG QIR
Sbjct: 267 HIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363


>gi|225872704|ref|YP_002754161.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
 gi|225792505|gb|ACO32595.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
          Length = 384

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 176/338 (52%), Positives = 230/338 (68%), Gaps = 5/338 (1%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---- 78
           L+ + TK  DP LW N   ++ LMR+R+ ++  +++  E+  R  D     ELA E    
Sbjct: 32  LAAIETKLADPALWSNPQLSQPLMRDRKRIEEQLAYDTELARRSGDIDAYFELARESEAA 91

Query: 79  -EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            E D ++  + S  +  +   VE  +  ++LSGE D+ +A + VH GAGGTESQDWA ML
Sbjct: 92  GEADANLEADLSREISALGEYVEKLESRTMLSGETDALNAIVTVHPGAGGTESQDWAEML 151

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY RWAE++ FKTE  +  DGEEAGIKSAT  I G  A+G L GE GVHRLVRISP+D
Sbjct: 152 MRMYLRWAEQQGFKTEMNDYQDGEEAGIKSATFTIIGDYAFGQLSGETGVHRLVRISPFD 211

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              RRHTSF+S++V P +DDSI+I+I   + R DTYR+ G GGQHVNTTDSAVRITHIPT
Sbjct: 212 QAKRRHTSFASVFVSPEIDDSIQIDIKPDELRTDTYRSGGKGGQHVNTTDSAVRITHIPT 271

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQHKN+ +A  MLR++LYE EL K++      E SK +I +G QIRSYVL
Sbjct: 272 GIVVQCQNERSQHKNREKAMKMLRSRLYEYELAKKQAETKKLEDSKLDINFGSQIRSYVL 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QPY++ KD RT +E      VLDG LD F++  L +++
Sbjct: 332 QPYRIAKDHRTKVEVGDVDRVLDGYLDPFIRGYLTMRR 369


>gi|299137096|ref|ZP_07030279.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
 gi|298601611|gb|EFI57766.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
          Length = 375

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 173/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R+    G +FD     + L+ +  K  DP +W +  +++ LMRER+ L++ ++   E+  
Sbjct: 12  RKYATCGSIFDSPRLKKELAVIEEKIADPAVWADAAKSQPLMRERKRLESQLADDAELAR 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           R  D     +L + E + S+  +    +  +    E  +  ++LS E D+ +A + VH G
Sbjct: 72  RGEDIDAYFDL-MREGEASVEPDLKREIDSLVAFSEALESRTMLSEENDTLNAIVTVHPG 130

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTESQDWA ML+RMY RWAE++ FKTE  E+ DG+EAGIKSAT  I G  A+G + GE
Sbjct: 131 AGGTESQDWAEMLMRMYLRWAERQGFKTEINELQDGDEAGIKSATFTITGDFAFGLIAGE 190

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVRISP+D   RRHTSF+S++V P +DDSI I+I   D RIDTYR+ G GGQHVN
Sbjct: 191 TGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVN 250

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+V  CQ ERSQHKNK +A  MLR++LYE EL K++ ++   E SK 
Sbjct: 251 TTDSAVRITHLPTGIVAGCQNERSQHKNKEKAMKMLRSRLYEYELDKKKAVSRKLEDSKL 310

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           EI +G QIRSYVLQPY++ KDLRT +E      VLDG+L+ F++  L +++
Sbjct: 311 EINFGSQIRSYVLQPYRIAKDLRTRVEVGDVDRVLDGELEPFIRGYLKMRR 361


>gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 367

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 173/341 (50%), Positives = 241/341 (70%), Gaps = 7/341 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86

Query: 74  ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           E+ +EE+D    + +QE    L++   ++E+K+   + +  AD N+ ++++ AGAGGTE+
Sbjct: 87  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +DWA ML RMY+R+AE++ FK + LE  DGE AGI  AT+ ++G  AYG L+ E GVHRL
Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIDILEEDDGEIAGINRATIRLEGEYAYGLLRTETGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG 
Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
 gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
          Length = 386

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 172/341 (50%), Positives = 237/341 (69%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  ++++   L DN 
Sbjct: 43  GGIFDYDAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELADNA 102

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ EE D + L        +++  +E  +F  +   EAD  + ++++ AGAGGTE+
Sbjct: 103 ELFEMSKEEGDETGLLTIEGETAKLQPLIEELEFRRMFGKEADPLNCFVDIQAGAGGTEA 162

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+ E GVHRL
Sbjct: 163 CDWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGVHRL 222

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP +DDSI+IEI+ SD R DTYRASGAGGQH+N TDSAV
Sbjct: 223 VRKSPFDSSGGRHTSFASLFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAV 282

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +KT++GWG 
Sbjct: 283 RLTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGH 342

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 343 QIRSYVLDNSR-IKDLRTNVEISATQKVLDGDLDAFIEASL 382


>gi|78776561|ref|YP_392876.1| peptide chain release factor 2 [Sulfurimonas denitrificans DSM
           1251]
 gi|123550812|sp|Q30TP0|RF2_SULDN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78497101|gb|ABB43641.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 365

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 172/350 (49%), Positives = 243/350 (69%), Gaps = 4/350 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++++ + G+ + D   +R++ ++        W +   A ++ +++   +  +      
Sbjct: 13  LSKKMSNITGVVEPDKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNLA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D   L E+A EE+D  ++ E  +  Q I+  +   + E LLS E D N+A L +H
Sbjct: 73  KNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++LLRMY R+AE+R +  E L+   G+EAGIK  +LLI G NAYG+LK
Sbjct: 133 PGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN++RHTSFSS+ V P VDD I I I + D R+DTYR+SGAGGQH
Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGES 301
           VN T+SA+RITHI TGVVVQCQ +RSQHKN+A A  ML+++LYELEL+ ++ EIA I   
Sbjct: 253 VNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELELENQKAEIAGI--- 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K+EIGWG QIRSYV+QPYQ +KD R+NI  ++ S +LDGD+D  ++  L
Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVL 359


>gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13]
 gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13]
          Length = 351

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 168/341 (49%), Positives = 240/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G +FD DN  ++L  L  + EDP +W++   ++ + +E++ L++ I   +++   + +N 
Sbjct: 8   GAIFDLDNKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNK 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L +LA EE D S L +   +   +  ++   +F+ + S   D N+ +++  +G+GGTE+
Sbjct: 68  ELFDLAFEESDDSTLNDLFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANMLLRMY R+ E++ FK E +EI +GE AGIK AT+ I G  AYG+ + E G+HRL
Sbjct: 128 QDWANMLLRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS SRRHTSF+ + VYP +D+S+EI+I+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 188 VRKSPFDSGSRRHTSFAGVNVYPEIDESVEIDINPADLRIDTYRASGAGGQHINKTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVVQCQ +RSQH+NKAQA +ML+A+LY +EL KR E     E +K++IGWG 
Sbjct: 248 RITHEPSGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWGH 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDG+LD F+  +L
Sbjct: 308 QIRSYVLDQSR-IKDLRTGVEVGNTQGVLDGNLDPFITESL 347


>gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J]
 gi|238691788|sp|B2U8V1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J]
          Length = 367

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  ++ + E+P +W +   A+ L RE++ L+  +  + ++ + L     L 
Sbjct: 27  LDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGAAELF 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ AGAGGTE+ DW
Sbjct: 87  ELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEACDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G  A+G+L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E++KT++GWG QIR
Sbjct: 267 HIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363


>gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|319768218|ref|YP_004133719.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
 gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
          Length = 367

 Score =  347 bits (890), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 180/355 (50%), Positives = 244/355 (68%), Gaps = 4/355 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +   P+ W +   A+ ++ E   L + +     
Sbjct: 13  KMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLVEEFSS 72

Query: 62  IQDRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +++R  DNL +  EL  EE D  +  E  +  +++  +    + + LL+   D N+A LE
Sbjct: 73  LEERF-DNLEVTYELLKEEPDDELQAELVEEAKKLMKDFSEFELQLLLNEPYDQNNAILE 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAGIKS TLLIKG NAYG+
Sbjct: 132 LHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGY 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+D++ RRHTSF S  V P +DD+IEIEI   + +IDTYR+SGAGG
Sbjct: 192 LKAEKGVHRLVRISPFDASGRRHTSFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIG 299
           QHVNTTDSAVRITH+PTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ E+A + 
Sbjct: 252 QHVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEL- 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 311 RGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 365


>gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 371

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 182/350 (52%), Positives = 241/350 (68%), Gaps = 8/350 (2%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LG   + D+  +++  LN K  +P  W +   A+ ++RE       I    ++ D + D
Sbjct: 21  SLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETNSYQRKIDQYDKLIDLITD 80

Query: 69  --NLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
             +LI L + +EED  S    QE  D +++   E    +  +LL+GE DS+DA L +HAG
Sbjct: 81  AEDLIAL-MEIEEDYSSYSDFQELVDEIEKDTAEF---KLNTLLNGEYDSHDAILSIHAG 136

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA+MLLRMYTR+AE + FK E L++   +EAGIKS TL I G NAYG+LKGE
Sbjct: 137 AGGTEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSVTLKISGDNAYGYLKGE 196

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHRLVRISP+DSN RRHTSFSS+ V+P +DD  E+EI + + +IDTYR+SGAGGQHVN
Sbjct: 197 KGVHRLVRISPFDSNKRRHTSFSSVDVFPEIDDDTEVEIKDEELKIDTYRSSGAGGQHVN 256

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL  L  ++++E     + + +
Sbjct: 257 TTDSAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLVALAEEEKKEKIEDLQGNYS 316

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I WG QIRSYV QPY MVKD RTN++      V+DGDLD F+ A L  K
Sbjct: 317 QIAWGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFINAYLQDK 366


>gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
 gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
          Length = 359

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 245/342 (71%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W +   A+ L RE++ L+  +  + +I + L D 
Sbjct: 15  FGGIFDYDAKAERLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDA 74

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L +LA E+DD + L     +   I   +E  +F  + S  AD  + ++++ AGAGGTE
Sbjct: 75  QELFDLAAEDDDDATLAAVEADTNAIGARLEELEFRRMFSNPADPLNCFMDIQAGAGGTE 134

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA++LLR Y R+ E + FKTE LE  DG+ AGIKSAT+ I+G  A+G L+ E GVHR
Sbjct: 135 AQDWASILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHR 194

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS + RHTSF+S++VYP VD+S+EI+I+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 195 LVRKSPFDSANGRHTSFASVFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSA 254

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYELE++ R       E SKT++GWG
Sbjct: 255 VRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWG 314

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 315 HQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 355


>gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola sp. JR]
 gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
          Length = 371

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 172/352 (48%), Positives = 241/352 (68%), Gaps = 1/352 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L+ +L  L    D    V+ ++ L  KT +   W N +EA+ +MRE   L + I    
Sbjct: 10  IELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKDTIGLYN 69

Query: 61  EIQDRLCDNLILLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++ +  D   L EL +E+DD   I +E + +++ ++  VE  +   LL  + D  +A +
Sbjct: 70  TLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGDKYDKGNAII 129

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +HAGAGGTE+QDW  MLLRMYTRWAE++ +K + L++  G+EAGIKSA++ I+GP AYG
Sbjct: 130 SLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISIEGPYAYG 189

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E+GVHRLVRISP+D++ RRHTSF+S+ V P VDD  EI I  +D RIDT+R+ GAG
Sbjct: 190 YLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDETEIVIDPADLRIDTFRSGGAG 249

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSAVRITHIPTG+VVQCQ ERSQH N+ +A  +L+A+L +LE++K+EE  N  
Sbjct: 250 GQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKKKEEELNKL 309

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + EI WG QIRSYV  PY +VKD RT +E  +   V+DG++D+F+ A L
Sbjct: 310 RGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYL 361


>gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 348

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/342 (52%), Positives = 238/342 (69%), Gaps = 2/342 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD      ++  LN K  D   W N   A+ ++RE+ H  + I    ++   + +   L
Sbjct: 4   LFDLSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDL 63

Query: 73  LELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++L   EDD S   +   +L+ I KL  ++K  E+LL+GE DSN+  + +HAGAGGTE+Q
Sbjct: 64  IDLMEMEDDYSFYGDLKLDLENIEKLSNDFK-LETLLNGEYDSNNCIISIHAGAGGTEAQ 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY R+AEKR F+ E L++   EEAGIKS TLLI G NAYG+LKGE+GVHRLV
Sbjct: 123 DWASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLV 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D+N RRHTSF+S+ VYP +DD  E+EI   D +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 183 RISPFDANKRRHTSFASLDVYPQLDDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL  L  ++++E     + + ++I WG Q
Sbjct: 243 ITHIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQ 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYV QPY +VKD RTN E    + V+DG LD+F+ + L +
Sbjct: 303 IRSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYLQL 344


>gi|170723283|ref|YP_001750971.1| peptide chain release factor 2 [Pseudomonas putida W619]
 gi|169761286|gb|ACA74602.1| peptide chain release factor 2 [Pseudomonas putida W619]
          Length = 304

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 167/300 (55%), Positives = 222/300 (74%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++   L D   LL++A+EE+D S + +    LQ ++ ++   +F  + SGE
Sbjct: 2   LAQVVETLDKMSGGLADCQDLLDMAVEENDESAVSDVVTELQGLEEKLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL   + +KDLRT +E++  + VLDGD+D +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCNKVLDGDIDQYLEASL 300


>gi|302131691|ref|ZP_07257681.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 304

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/296 (55%), Positives = 220/296 (74%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + E+   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N
Sbjct: 6   VETLDEMSSGLVDAKDLLLMSAEEEDQAAIDDVAAEVERLRASLEKLEFRRMFSGEMDPN 65

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG 
Sbjct: 66  NAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGE 125

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+
Sbjct: 126 YAFGWLRTEIGVHRLVRKSPFDSGTRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRS 185

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   
Sbjct: 186 SGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAA 245

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   E +K++IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 246 SQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 300


>gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
          Length = 331

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/321 (51%), Positives = 235/321 (73%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           EDP +W +   A+ L RER+ L+  +  ++ +   L D+  L E++ EE D +  +    
Sbjct: 8   EDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGDDATCEAIEA 67

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           ++++   EVE  +F  + S   D ++ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ F
Sbjct: 68  DVEKSADEVEALEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGF 127

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE +E  +G+ AGI+SAT+ ++G  AYG L+ E GVHRLVR SP+DS+  RHTSF+S++
Sbjct: 128 KTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSSGGRHTSFASVF 187

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           VYP VDDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH
Sbjct: 188 VYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQH 247

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+A+AW MLR++LYE E++KR       ES+K+++GWG QIRSYVL   + +KDLRTN+
Sbjct: 248 KNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWGHQIRSYVLDQSR-IKDLRTNV 306

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   VLDGDLD+F+ A+L
Sbjct: 307 EISNTQKVLDGDLDEFITASL 327


>gi|281357586|ref|ZP_06244073.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
 gi|281315843|gb|EFA99869.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
          Length = 364

 Score =  346 bits (888), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 181/326 (55%), Positives = 233/326 (71%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K   P  W N   A+  + +     N +   +++Q  + D    +ELA E+++   L
Sbjct: 37  LEQKMSAPDFWDNKESAQNTVAQLSACRNLLEPFRKLQSEVEDYSASVELAAEDEE--FL 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QET  + +R+   ++  +  S LSG+ D ++ Y  VHAGAGGTES DWANMLLRMY R+ 
Sbjct: 95  QETEISYRRLLKSLDRMEIMSFLSGKFDRSNLYFSVHAGAGGTESCDWANMLLRMYRRYF 154

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+R +K E +++  GEEAG+KSATL + G  AYG++KGE+GVHRLVRISP+DSN+RRHTS
Sbjct: 155 ERRGWKDEVIDLQPGEEAGVKSATLHVTGEFAYGYMKGEKGVHRLVRISPFDSNARRHTS 214

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F S+ V+P +DD IEIEI ES  RIDTYR+SGAGGQHVNTTDSA+RITH+PTG+VV CQ 
Sbjct: 215 FVSVDVFPELDDDIEIEIDESQLRIDTYRSSGAGGQHVNTTDSAIRITHLPTGIVVCCQN 274

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A A  ML+AKLYE E +KR   A+     K E GWG QIRSYVLQPYQMVKD
Sbjct: 275 ERSQHKNRATAMKMLKAKLYEFEEEKRRNEADAIRGEKAENGWGSQIRSYVLQPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT +E +  + VLDGD+D+F++A L
Sbjct: 335 LRTEVETSDTAGVLDGDIDEFIEAYL 360


>gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica]
          Length = 310

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 172/307 (56%), Positives = 222/307 (72%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  I +++  L D   LLELA+E DD     E    L++++ ++   +F
Sbjct: 1   MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFHEAVAELEQLEGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DGE AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+
Sbjct: 121 LKSATIRIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD
Sbjct: 241 YELEMQKKNANRQEMEENKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|94500761|ref|ZP_01307290.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
 gi|94427083|gb|EAT12064.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
          Length = 310

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 167/307 (54%), Positives = 219/307 (71%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + RER  L+  +  I ++   L D   LL++++ EDD   + E    L  ++ ++E  +F
Sbjct: 1   MGRERSALEAVVQTIDDMDTGLSDCDELLQMSVAEDDADSVDEVVSELNELQAKLEKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGEAD N AYL++ AG+GGTE+QDWA M+LRMY RW E + FK E +E   G+ AG
Sbjct: 61  RRMFSGEADENSAYLDIQAGSGGTEAQDWAEMILRMYLRWGEAKGFKVELMEASAGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+  +G  A+GWL+ E GVHRLVR SP+DS+ RRHTSF+S++V P +DD+IEI+I+
Sbjct: 121 IKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASVFVSPEIDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVNTT+SAVRITH+PT  V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVTQCQNQRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +ELE+QKR       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD
Sbjct: 241 FELEMQKRNADTQALEESKSDIGWGSQIRSYVLDDAR-IKDLRTGVENRNTQQVLDGALD 299

Query: 345 DFMKATL 351
            FM+A+L
Sbjct: 300 PFMEASL 306


>gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
 gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
          Length = 358

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 167/343 (48%), Positives = 233/343 (67%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   + ++   +K  DP  W N  EA+ ++ E   L N      ++++ + D
Sbjct: 6   TLGGLFDLDGLQEAIADNESKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEAIED 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +LLE+  E+DD  ++ E S+  +  + +++  Q   LL+G+ D ++A LE+H GAGGT
Sbjct: 66  LEVLLEMVQEDDDDELVSELSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGAGGT 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDW +MLLRMYTRWAE+  F  E  +   G+EAGIKS TL I G NAYG+L+ E+GVH
Sbjct: 126 ESQDWGSMLLRMYTRWAEQHGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEKGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF S+ V P +DD +E+++   D +++ +R+SGAGGQH+N T S
Sbjct: 186 RLVRISPFDSAGRRHTSFCSVNVMPELDDDVEVDLRPEDIKMEVFRSSGAGGQHINKTSS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ HIPTG+VV  Q +RSQ +N+A A  MLR+KLY++EL+++E+     +  + +IGW
Sbjct: 246 AVRLIHIPTGIVVSSQAQRSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLDIGW 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYV  PY MVKD RTN E  + S V+DGDLD F+ A L
Sbjct: 306 GSQIRSYVFHPYSMVKDHRTNYETGNISSVMDGDLDGFINAYL 348


>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229576671|sp|B2V5M0|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 369

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/326 (54%), Positives = 231/326 (70%), Gaps = 6/326 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSILQET 88
           DP+ W +  +A+ +   R +L   +  I  +  +   L D + LLE+   E+D  +  E 
Sbjct: 42  DPNFWNDTKKAQEISSRRNYLGEKLEEILTVDKKVNNLLDYITLLEM---EEDQELYNEV 98

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L+ I+ E+   +  SLLS E DS +A L V AG+GG E+ DW  MLLRMYTRWAEKR
Sbjct: 99  EKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAGSGGVEACDWTEMLLRMYTRWAEKR 158

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            ++ E ++    + AG+KSATL+IKGP AYG+LKGEQGVHRLVRISP+D+N RRHTSFS+
Sbjct: 159 GYQVELVDFQPDDVAGVKSATLIIKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSA 218

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +D+ I++EI+E D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ ERS
Sbjct: 219 VSVIPEIDEDIKVEINEEDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGIVVACQSERS 278

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A NML+AKLY+LEL+KR+E     E  K +I WG QIRSYV QPYQMVKDLRT
Sbjct: 279 QLQNKLKATNMLKAKLYQLELEKRKEKQKELEGEKKDITWGSQIRSYVFQPYQMVKDLRT 338

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
             E  +   V+DG++DDF+++ L  K
Sbjct: 339 GFETGNIEAVMDGEIDDFIESYLKWK 364


>gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379]
 gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           propionicus DSM 2379]
          Length = 361

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 173/342 (50%), Positives = 237/342 (69%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD D   + +  + +K   P  W N   ++ +++ER  L+  +     +  +  D  
Sbjct: 9   GGLFDVDGKRESIQEIESKIAAPGFWDNADSSQGILKERTSLEKIVQLWDSLVRQQEDVR 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +++EL  EE D   L+E  +   R++  VE  +F+ +LSGE D N  ++ ++ GAGGTES
Sbjct: 69  VMIELGEEEADEETLKEVGEMNNRLQQGVEAAEFQRMLSGEHDRNSCFISINPGAGGTES 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY R+ EK+ +KT   +   G+EAGIKSAT  + G  AYG+LK E G+HRL
Sbjct: 129 QDWAEMLLRMYLRYCEKKGWKTSITDYQSGDEAGIKSATFSVSGEYAYGYLKAEAGIHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+DSN+RRHTSF+S++ +P +++  I+I+I++SD R+DT+R+ GAGGQHVNTTDSA
Sbjct: 189 VRISPFDSNARRHTSFASVYAFPEIEEEDIDIKIADSDLRVDTFRSGGAGGQHVNTTDSA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VV CQ ERSQ  N+A A  +LRAKLYE E+Q+R   A+   S K EIGWG
Sbjct: 249 VRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEVQERTARASEIASEKKEIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL PY+MVKDLRT +E  +P  VLDG L++F+ A L
Sbjct: 309 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEEFVVAYL 350


>gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
 gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
          Length = 375

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/321 (55%), Positives = 236/321 (73%), Gaps = 2/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           EDP  W N  E+K L++E+  L   +S  +E+     D  +L+EL  +E    + ++   
Sbjct: 44  EDPDFW-NKKESKQLLKEQASLKKFLSEWEELLTIREDIDVLIEL-FKEGSEEVKEDIIS 101

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           NL  +K  V   + + +L+GE D N+A + +HAGAGGTE+ DW +ML RMYTRW E++K+
Sbjct: 102 NLNELKKRVSDFELKLILNGEHDINNAIVTIHAGAGGTEACDWVSMLFRMYTRWVERKKY 161

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L++  G+EAGIKS T  + G  +YG+LKGE GVHRLVRISP+DSN+RRHTSF+S++
Sbjct: 162 KYEILDMLPGDEAGIKSITFNVIGEYSYGYLKGESGVHRLVRISPFDSNNRRHTSFASVF 221

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD I+IEI+ESD +I+T+RASGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQH
Sbjct: 222 VLPEIDDEIDIEINESDLKIETFRASGAGGQHVNTTDSAVRITHLPTGIVVSCQNERSQH 281

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNKA A  +L+A+LYE E++KR +     ESSKTEIGWG QIRSYV+ PY+MVKDLRT  
Sbjct: 282 KNKAHAMKILKARLYEYEMEKRNKEKEKLESSKTEIGWGNQIRSYVMHPYKMVKDLRTRY 341

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGD+DDF+K  L
Sbjct: 342 ETGNVDAVMDGDIDDFIKTYL 362


>gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
 gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
          Length = 329

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 168/317 (52%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W N   A+ L RER  L+  +  I+ +   + D   LL++A+EE+D S++ +    + R
Sbjct: 10  VWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEENDESMVADVQAEIDR 69

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ E+   +F  + SGE D N+AYL++ +G+GGTE+QDWA M+LRMY RW E + FK   
Sbjct: 70  LEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRMYLRWGEAKGFKVTL 129

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
            E   GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSF S++V P 
Sbjct: 130 EECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFCSVFVSPE 189

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+IEIEI+ +D RIDTYRASGAGGQHVN TDSA+RITHIP+G+VVQCQ ERSQH N+ 
Sbjct: 190 IDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGIVVQCQNERSQHANRD 249

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           +A+ MLRA++YE E+ KR       E SK++IGWG QIRSYVL   + VKDLRT ++ ++
Sbjct: 250 KAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-VKDLRTGVQTSN 308

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F+  +L
Sbjct: 309 TQAVLDGDLDQFIVESL 325


>gi|124515298|gb|EAY56808.1| Peptide chain release factor 2 [Leptospirillum rubarum]
          Length = 370

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 239/353 (67%), Gaps = 5/353 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M+ +R     GG+FD D     L  ++ +++ P  W++   A+ ++RE+  L+  +S I+
Sbjct: 1   MEKNRGFPRSGGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQ 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+    D   L ELA    D   L E S  +      V+  + E +LS     N A+LE
Sbjct: 61  GIEKEDADIRALFELA---SDPDFLAELSRRVPEFSESVKAFELEEILSDAKSDNPAFLE 117

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA MLLRMY RWAE+     E ++I  GEEAGIKSAT+L++G +A+G+
Sbjct: 118 IHPGAGGTESQDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGY 177

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G+HRLVRISP+D+N RRHTSF+S++VYP ++D I +EI + D RIDT+RAS AGG
Sbjct: 178 LMSESGIHRLVRISPFDANKRRHTSFTSVFVYPELEDDIPVEIRDEDIRIDTFRASSAGG 237

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-- 298
           QHVN T SA+R+TH+PTG+V+  Q ERSQ +N+  A+ +LRAKLYELE ++++E  +   
Sbjct: 238 QHVNKTSSAIRLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKIS 297

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G  +K EIGWG QIRSYVLQPYQ++KD RT +E    S+VLDGDLD F++  L
Sbjct: 298 GAQNKKEIGWGHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYL 350


>gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 310

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 170/307 (55%), Positives = 222/307 (72%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  + ++   L D   LLELA+E +D     E  + L  +  ++   +F
Sbjct: 1   MGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG
Sbjct: 61  RRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+
Sbjct: 121 TKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+       E +K++IGWG QIRSYVL   + +KDLRT++E  +   VLDGDLD
Sbjct: 241 YEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 RFIEASL 306


>gi|260771153|ref|ZP_05880080.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|260613750|gb|EEX38942.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|315179241|gb|ADT86155.1| peptide chain release factor 2 [Vibrio furnissii NCTC 11218]
          Length = 320

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 169/317 (53%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L+  +  I ++   + D   LLELA+E +D     E    L+ 
Sbjct: 1   MWNEPERAQALGKERSSLEAVVETIDQLDQGVDDVEGLLELAVEAEDQETFDEIGPELEE 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ DS+D YL++ AG+GGTE+QDW +M+LRMY RWA+ + FKTE 
Sbjct: 61  LESKLAKLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFKTEV 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP 
Sbjct: 121 IEVSEGDVAGLKSATVRIVGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 181 IDDNIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDKFIEASL 316


>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 330

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 165/320 (51%), Positives = 226/320 (70%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N  +A+ + +E   L N++   K++   + D  ++L++A+EE+D S+  E    
Sbjct: 3   DPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIKQF 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  I+  VE ++   LL GE D N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  F 
Sbjct: 63  VNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTGFS 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V
Sbjct: 123 VELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ +
Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQMQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY MVKD RT++E
Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRTSVE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DG++D F++  L
Sbjct: 303 TGNVQAVMDGNIDQFIEGYL 322


>gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
          Length = 358

 Score =  346 bits (887), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 175/345 (50%), Positives = 228/345 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG F+ +    RLS ++        W +   A  + +E+  L + +     +++  
Sbjct: 1   MKTYGGHFEVERKSARLSEISDMEAMEGFWDDSDNAAKVQKEKSVLSDVVETYTTLKELF 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +L+E A  E+D     E  D   +   +    + + LLSGE D N+A + ++AGAG
Sbjct: 61  DEFEVLVEFANGEEDEDSALEAIDCYDKFLKQFNAAELKVLLSGEVDPNNAIVSINAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+ML RM  RWAE + FK + L++ DG+ AGIKSAT+ I G  AYG+LK E G
Sbjct: 121 GTESCDWASMLFRMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN+RRHTSFSSI+V P +DD+IEIEI + D +ID YR+ GAGGQ VNTT
Sbjct: 181 VHRLVRISPFDSNARRHTSFSSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT  VV CQ ERSQ +NK QA  +LR++LYELE++KR       E+SK EI
Sbjct: 241 DSAVRITHIPTNTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL PY++VKD RT+ E  +   VLDGDLD FM A L
Sbjct: 301 GWGAQIRSYVLHPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFL 345


>gi|300722130|ref|YP_003711413.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
 gi|297628630|emb|CBJ89208.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
          Length = 310

 Score =  346 bits (887), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 171/307 (55%), Positives = 222/307 (72%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L++ +  I ++   L D   LLELA+E DD     E    L +++ ++   +F
Sbjct: 1   MGKERSSLESIVETIDQLDQGLEDVNGLLELAVEADDEETFNEAVAELDQLEEKLGLLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+
Sbjct: 121 LKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHMPTGIVTQCQTDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD
Sbjct: 241 YELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 366

 Score =  346 bits (887), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 172/355 (48%), Positives = 239/355 (67%), Gaps = 2/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L + L  + G  D DN    L+ L+ +     LW +   A+ ++ ER  +   ++   
Sbjct: 12  VSLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFT 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++       LL + +  D   +L E    L ++K +V+ K+ E L S EAD ND ++E
Sbjct: 72  ELEEEYNYYTELLSV-INNDTDELLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIE 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           + +GAGGTES DW++ML RMY RWAE    FKTE +   DGEE G+KSAT+ + G NAYG
Sbjct: 131 IQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K E G+HRLVRISP++SN++RHT+FSSI V PV+++   IEI + D RIDTYRASGAG
Sbjct: 191 WAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAG 250

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N A+A N+L+++LY+L+LQ++E+     
Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEE 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +  IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 311 HNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISALTTK 365


>gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
 gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
          Length = 321

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 168/317 (52%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ L +ER  L+  +  I+ + +   D   LL+L + E+D   L++    +Q+
Sbjct: 1   MWDDPERAQALGKERAALEAIVVSIETLTEGANDTADLLDLVVAENDVDSLEDIKSEIQK 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   ++  +F  + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RW E + FKTE 
Sbjct: 61  LLAILDELEFRRMFSGEVDENNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEAKGFKTEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P 
Sbjct: 121 IECSAGEVAGIKSATIKFDGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH+PTGVVVQCQ ERSQH+N+ 
Sbjct: 181 IDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGVVVQCQTERSQHQNRD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  +LR KLYELE+ KR E     E SK +IGWG QIRSYVL   + +KDLRT +E ++
Sbjct: 241 NAMKLLRGKLYELEMLKRSEKQQALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVETSN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDG +D F++A+L
Sbjct: 300 TQAVLDGAIDMFIQASL 316


>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
 gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
          Length = 372

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 174/337 (51%), Positives = 237/337 (70%), Gaps = 5/337 (1%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+  + L  L+      H+W    +AK +++ R+ L+  I  ++  +  L D   LL + 
Sbjct: 26  DSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEATEKVLSDIRELLHIT 85

Query: 77  LEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    ++L+E  +  +++  ++E + F   LSGE D+ +AYL + AGAGG E+ DWA
Sbjct: 86  EEEDLETQTLLKEELEKAEQMIKDMEIRAF---LSGEMDAKNAYLTIQAGAGGVEACDWA 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RWAEK  ++ E ++I   + AGIKSATLLIKGP AYG+LKGE GVHRLVRIS
Sbjct: 143 QMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRIS 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+N+RRHTSF+S+ V P +D+SI IEI E D  ++T+RASGAGGQ+VN TD+AVRI H
Sbjct: 203 PFDANARRHTSFASVTVVPQIDESINIEIREEDIEMETFRASGAGGQYVNKTDTAVRIRH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+VV CQQERSQ++N+ +A  +L+AKLY+L+LQ+ EE     E  KTEIGWG QIRS
Sbjct: 263 KPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRALEGEKTEIGWGHQIRS 322

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YV QPYQ+VKDLRT +E      V+DG++D F++A L
Sbjct: 323 YVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYL 359


>gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 372

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 237/350 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K    L  +G LFD D     L  L T+T  P  WQ++  ++ ++++ + + + I   ++
Sbjct: 13  KAEEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D  +L EL++EE +  + +E    L  ++ +++  + E LL+G  D N+A L +
Sbjct: 73  LYSQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+L
Sbjct: 133 HAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     + 
Sbjct: 253 HVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L
Sbjct: 313 EQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362


>gi|189183642|ref|YP_001937427.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180413|dbj|BAG40193.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 287

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 211/277 (76%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A++E+D   +       ++++ E +  Q E L + + D ND +L+++AGAGGTES DWA
Sbjct: 4   IAIKENDIEFIHNIEQEWKKLQEEAKKLQVECLFTSDVDVNDCFLDINAGAGGTESNDWA 63

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +M+LRMY R+AE   FKTE + + DGEEAG+KSA++ I G NAYGW K E GVHRLVR S
Sbjct: 64  SMMLRMYLRFAESMNFKTEVVYLLDGEEAGVKSASVKICGHNAYGWFKTESGVHRLVRNS 123

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYPV++D+I++ I + D RIDTYRASGAGGQHVNTTDSA+RITH
Sbjct: 124 PFNALGKRMTSFASAWVYPVINDNIQVVIEDKDIRIDTYRASGAGGQHVNTTDSAIRITH 183

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PT +VVQCQ +RSQHKNKA+A  ML+AK+YELE +K+ EI N   ++KT+  WG  IRS
Sbjct: 184 FPTKIVVQCQNDRSQHKNKAEAMRMLKAKIYELEQKKQNEIINNHNAAKTDNSWGYHIRS 243

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVLQPYQ+VKDLRTN+E +    VLDGDL+ F+ A+L
Sbjct: 244 YVLQPYQLVKDLRTNVETSDTKRVLDGDLEKFIYASL 280


>gi|301384023|ref|ZP_07232441.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058729|ref|ZP_07250270.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato K40]
 gi|331016328|gb|EGH96384.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 304

 Score =  346 bits (887), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 165/296 (55%), Positives = 220/296 (74%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + E+   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N
Sbjct: 6   VETLDEMSSGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPN 65

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG 
Sbjct: 66  NAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGE 125

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+
Sbjct: 126 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRS 185

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   
Sbjct: 186 SGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAA 245

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   E +K++IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 246 SQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 300


>gi|73914009|sp|Q9CP66|RF2_PASMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  345 bits (886), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 245/349 (70%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +
Sbjct: 14  LTERTQVLRGYLDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D +   E    L+ ++ ++   +F  + SG+ D+ D Y+++ 
Sbjct: 74  DQGLEDVEGLLELAIEAEDEATFHEAVAELEELEQQLAKLEFRRMFSGQHDAADCYVDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AGIKSAT+ + G  A+GWL+
Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+I+I+ +D RID YRASGAGGQH
Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q    L+AKLYE+ELQK+       E +
Sbjct: 254 VNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361


>gi|319942340|ref|ZP_08016655.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
 gi|319804213|gb|EFW01113.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
          Length = 354

 Score =  345 bits (886), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 171/342 (50%), Positives = 237/342 (69%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD D   +RL  +N + E+P LW +   A+ + +E++ LD+ +     +   + D 
Sbjct: 3   FGGIFDVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIADA 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L EL+L E+D   L+   +++ RI+ EV   +F+ + +   DS + YLE+ +GAGGTE
Sbjct: 63  GELFELSLAEEDFDSLEVIGEDVDRIEHEVAQLEFKRMFNQPMDSANCYLEIQSGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML RMY R+AE++ FK    E   GE AGIKS TL I+G  AYG L+ E G+HR
Sbjct: 123 AQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+D+N+RRHTSF+S++VYP VDDSI+IEI+ +D  ID +RASGAGGQH+  T+SA
Sbjct: 183 LVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H PTG++  CQ +RSQH+N+ +A   L+AKLYELE++KR E     E SK++IGWG
Sbjct: 243 VRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + VKDLRT +E  +   VLDGDLD F++A+L
Sbjct: 303 HQIRSYVLDQSR-VKDLRTGVETGNTGGVLDGDLDQFIEASL 343


>gi|294788774|ref|ZP_06754015.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
 gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
          Length = 367

 Score =  345 bits (886), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 166/338 (49%), Positives = 239/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  +++ + DN  L+
Sbjct: 27  MDYQGKKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNLENGIADNRELI 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 87  DMVVEENDTDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK + LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLRTETGVHRLVRY 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+N++RHTSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDANNKRHTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  MLR+KL+ELE++KR E     E  K+++GWG QIR
Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae NTUH-K2044]
 gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
 gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
          Length = 320

 Score =  345 bits (886), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 173/317 (54%), Positives = 222/317 (70%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L+  +  + ++   L D   LL+LA+E DD     E    L  
Sbjct: 1   MWNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAVAELDT 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE 
Sbjct: 61  LEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEI 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP 
Sbjct: 121 IEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK 
Sbjct: 181 VEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDG LD F++A+L
Sbjct: 300 TQAVLDGSLDQFIEASL 316


>gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4]
 gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           uraniireducens Rf4]
          Length = 317

 Score =  345 bits (885), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 163/308 (52%), Positives = 226/308 (73%), Gaps = 2/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++ER  ++  +S       ++ D  +L+EL  E +D + L E       ++  V + +F
Sbjct: 1   MLKERTVMEKTLSAWDRFNRQVDDIRVLIELGSEAEDEATLAEVHGLNDELEKGVSHAEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + +LSG  D++  ++ +++GAGGTESQDWA MLLRMY R+ E++ +KTE  +   G+EAG
Sbjct: 61  QKMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGDEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +K  T  + G   YG+LK E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IE++++
Sbjct: 121 VKGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEVKVN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D R+DT+R+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQH NKA A  +LRAKL
Sbjct: 181 EADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLRAKL 240

Query: 285 YELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           YE ELQ+RE + A IG   K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDGDL
Sbjct: 241 YERELQERESQAAEIG-GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGDL 299

Query: 344 DDFMKATL 351
           ++F+ A L
Sbjct: 300 EEFIVAFL 307


>gi|313500280|gb|ADR61646.1| PrfB [Pseudomonas putida BIRD-1]
          Length = 304

 Score =  345 bits (885), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 167/300 (55%), Positives = 220/300 (73%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D   + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELESLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL   + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 300


>gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 354

 Score =  345 bits (885), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 176/344 (51%), Positives = 228/344 (66%), Gaps = 2/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD+D   + +S    K  +P  W +   A+ L+ E   L         + + L D
Sbjct: 2   ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             + LEL  E+ D  +  E      ++K +++  Q   LL+G+ D N+A LE+H GAGGT
Sbjct: 62  LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +MLLRMYTRWAE   FK + L+   GE AGI S ++LI G NAYG+L+ E+GVH
Sbjct: 122 EAQDWGSMLLRMYTRWAETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF+S+ V P +DD + I+IS  + ++D YRASGAGGQHVN T S
Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307
           AVRITHIPTG+VV  Q +RSQ +N+  A NML++KLYELE QK+ EE A I E  + +IG
Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKI-EGEQLDIG 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L
Sbjct: 301 WGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYL 344


>gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
 gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
          Length = 332

 Score =  345 bits (885), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 169/326 (51%), Positives = 230/326 (70%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K   P  W +  EA+ + +E   L ++IS  ++++ R  D   L +L ++E D S+ 
Sbjct: 1   MEHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVY 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E +  L+ +  ++E  +   LL+GE D+N+A L +HAGAGGTE+QDWA MLLRMY RWA
Sbjct: 61  DEVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EKR +K E L+   GEEAGIKSAT+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTS
Sbjct: 121 EKRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P +DD+ EI I+ +D +IDT+R+ GAGGQHVN T+SAVRITH+PTG+VVQCQ 
Sbjct: 181 FAAVDVMPEIDDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQCQS 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+ QA  +LRAKL+ELE QKRE+  +        I WG QIRSYV  PY +VKD
Sbjct: 241 ERSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN E  +   V+DG++D F++A L
Sbjct: 301 HRTNAETGNVQAVMDGEIDLFIEAYL 326


>gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
 gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
          Length = 338

 Score =  345 bits (885), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 172/330 (52%), Positives = 227/330 (68%), Gaps = 2/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL+LA +E D   L
Sbjct: 4   LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLA-DESDSEFL 62

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
                 L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY RWA
Sbjct: 63  DGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVRWA 122

Query: 146 EK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
                F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRRHT
Sbjct: 123 GTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ
Sbjct: 183 SFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
             RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+MVK
Sbjct: 243 TSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVK 302

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           DLRT  E      VLDGDLD F+ A L  K
Sbjct: 303 DLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|303252568|ref|ZP_07338731.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247319|ref|ZP_07529367.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648536|gb|EFL78729.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856163|gb|EFM88318.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 347

 Score =  345 bits (885), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 173/342 (50%), Positives = 240/342 (70%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I+ +   + D 
Sbjct: 3   FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE
Sbjct: 63  EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HR
Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+ +VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG
Sbjct: 243 VRITHIPSDIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 303 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 343


>gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
 gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
          Length = 368

 Score =  345 bits (884), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 171/339 (50%), Positives = 238/339 (70%), Gaps = 1/339 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
             D+D+   RL+ L    ED  +W +    + + RE++ L++ +  +  ++ +L D   L
Sbjct: 26  FLDFDSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSMEKQLGDAKEL 85

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            ++A +E D + L   S + + I+  +   +F  + SG  DSN+ ++++ +G+GGTE+QD
Sbjct: 86  FQIAKDEADEAALVSISLDAENIEKAIANLEFRRMFSGPMDSNNCFVDIQSGSGGTEAQD 145

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML RMY R+ E++ F  E LE   G+ AGIKSATL I G  AYG+L+ E GVHRLVR
Sbjct: 146 WAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGFLRTETGVHRLVR 205

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D RIDT+RASGAGGQH+N TDSA+RI
Sbjct: 206 KSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQHINKTDSAIRI 265

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH PTG+VVQCQ  RSQH+NKA A  ML+++L+E EL+KR E     E +KT+IGWG QI
Sbjct: 266 THNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAIEENKTDIGWGHQI 325

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL   + +KDLRTN+E  +  +VLDGDL+ F++A+L
Sbjct: 326 RSYVLDQSR-IKDLRTNVEVGNTQNVLDGDLNSFIEASL 363


>gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 366

 Score =  345 bits (884), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 228/320 (71%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ + R++  L +++S   E++  L D  +L ELA EEDD   L+ET+ +L
Sbjct: 42  PGFWDDQAQAQKISRQQAVLKDSVSLYGELRQSLEDLEVLAELAQEEDDDIALRETAKDL 101

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++L V   + + LLSGE D  +A + +HAGAGGTE+QDW  MLLRM+TRWAE  +++ 
Sbjct: 102 KQLELRVSELELDVLLSGEYDRGNAIISLHAGAGGTEAQDWVEMLLRMFTRWAEDHRYRV 161

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             L++  G+EAGIKS T+ I GPNA+G+LK E+GVHRLVRISP+D+  RRHTSF+S+ V 
Sbjct: 162 IVLDMLSGDEAGIKSVTVEIVGPNAFGYLKSEKGVHRLVRISPFDTAGRRHTSFASVEVL 221

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P VD+ ++IEI   D +IDT+RA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ  N
Sbjct: 222 PEVDEDVDIEIKTEDLKIDTFRAGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQLSN 281

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +  A  +L+AKL ELELQK+E E+A++      EI WG QIRSYV  PY +VKD RT  E
Sbjct: 282 RNSAMKLLKAKLAELELQKKEAEMASL-RGDHQEIAWGSQIRSYVFHPYSLVKDHRTGAE 340

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V++G+LD FM A L
Sbjct: 341 TGNIEAVMNGELDKFMAAFL 360


>gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
 gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
          Length = 365

 Score =  344 bits (883), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 168/353 (47%), Positives = 239/353 (67%), Gaps = 6/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ +  +   D   +RL  +    +DP+ W +   A  + +E+  ++  ++  +  
Sbjct: 13  LKTKVDSIHKIIKPDTLKERLCEIEKLQQDPNFWNDAKRAGEIGKEKSKIERMLATYQNA 72

Query: 63  QDRLCDNLILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ + D   L E++  + D   +L   S NL++   E++  + E +LSGE D  +A + +
Sbjct: 73  KNSIDDARELFEISANDTDTLELLFAESQNLEQ---EIKKVEIEVMLSGEHDGANAIVTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTESQDW ++L RMY RW E+R FK E L+  DGEEAGIK    L+KG NAYG++
Sbjct: 130 QPGAGGTESQDWGSILYRMYLRWCERRGFKAEILDYQDGEEAGIKGVAFLVKGENAYGYM 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR SP+D+N++RHTSF+S+ V P +DD+IEI+I E D RIDTYRASGAGGQ
Sbjct: 190 KTESGVHRLVRNSPFDANTKRHTSFASVQVSPELDDNIEIDIEEKDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SA+RITH+PTG+VVQCQ +RSQHKNKA A  ML++KLYELE +K+   +++   
Sbjct: 250 HINKTESAIRITHLPTGIVVQCQNDRSQHKNKASALKMLQSKLYELEREKQN--SSVATQ 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 308 EKSEIGWGHQIRSYVLSPYQQVKDNRSNIAYSNVEAILDGDIDSIIEGVLISK 360


>gi|45443320|ref|NP_994859.1| peptide chain release factor 2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806377|ref|YP_650293.1| peptide chain release factor 2 [Yersinia pestis Antiqua]
 gi|108813248|ref|YP_649015.1| peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|145597933|ref|YP_001162009.1| peptide chain release factor 2 [Yersinia pestis Pestoides F]
 gi|170023172|ref|YP_001719677.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186896595|ref|YP_001873707.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|270487483|ref|ZP_06204557.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294502944|ref|YP_003567006.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
 gi|21960210|gb|AAM86823.1|AE013928_8 peptide chain release factor RF-2 [Yersinia pestis KIM 10]
 gi|45438189|gb|AAS63736.1| peptide chain release factor RF-2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108776896|gb|ABG19415.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Nepal516]
 gi|108778290|gb|ABG12348.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Antiqua]
 gi|145209629|gb|ABP39036.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Pestoides F]
 gi|169749706|gb|ACA67224.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186699621|gb|ACC90250.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|262360979|gb|ACY57700.1| peptide chain release factor RF-2 [Yersinia pestis D106004]
 gi|262364919|gb|ACY61476.1| peptide chain release factor RF-2 [Yersinia pestis D182038]
 gi|270335987|gb|EFA46764.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294353403|gb|ADE63744.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
          Length = 310

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 172/307 (56%), Positives = 221/307 (71%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  ++ I +++  L D   LLELA+E DD     ET   L+ +  ++   +F
Sbjct: 1   MGKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE D  + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 LKSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|161506411|ref|YP_001573523.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867758|gb|ABX24381.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 293

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 169/280 (60%), Positives = 207/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
          Length = 375

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 237/321 (73%), Gaps = 3/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-NLILLELALEEDDCSILQETSD 90
           +P  W +  +AK + ++R+ L + ++    ++ R+ D + ++ EL  E+ D ++L   S+
Sbjct: 40  EPDFWSDQEKAKSISQKRKALQDKLNTYTSLKSRIKDLDEMVSELKEEDLDTTLL--ISE 97

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ ++ +++  + E+ LS E D N+AYL + AGAGGTE+ DWA+MLLRMYTRWAEK  +
Sbjct: 98  ELEAVEKDLKKFELETYLSDEMDINNAYLTIQAGAGGTEACDWASMLLRMYTRWAEKHGY 157

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + +  +I+  + AGIKSATL IKGP AYG+LK E GVHRLVRISP+D+N+RRHTSF+S+ 
Sbjct: 158 EVQLTDINPDDVAGIKSATLYIKGPYAYGYLKSENGVHRLVRISPFDANARRHTSFASVL 217

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P V++ + IEI E D RIDTYRASGAGGQ+VN TD+AVRITHIPTG+VV CQQERSQ 
Sbjct: 218 VVPEVNEDVNIEIKEEDLRIDTYRASGAGGQYVNKTDTAVRITHIPTGIVVACQQERSQI 277

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+ +A  ML+A+LY+LELQK EE     E  KT+IGWG +IRSY+ QP Q+VKDLRT  
Sbjct: 278 QNRRKAMEMLKARLYQLELQKIEEKKKSLEGPKTDIGWGYKIRSYIFQPSQLVKDLRTGE 337

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG++D+F++A L
Sbjct: 338 ESGNIEAVMDGEIDNFIEAYL 358


>gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
 gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
          Length = 320

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 176/317 (55%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L+  +  I ++   L D   LLELA+E DD     E    L++
Sbjct: 1   MWNEPERAQALGKERSSLEAIVETIDQMTQGLEDVEGLLELAVEADDEDTFNEAEAELEQ 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE 
Sbjct: 61  LEGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEI 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP 
Sbjct: 121 IEESDGDVAGLKSATVKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK 
Sbjct: 181 VDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   L+AKLYELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDKFIEASL 316


>gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
 gi|166977374|sp|A8F531|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
          Length = 367

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 173/339 (51%), Positives = 232/339 (68%), Gaps = 2/339 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L D D     L  + ++  DP +W++  +A  + ++ + +   +S I EI+    D  + 
Sbjct: 23  LIDPDKLNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISEIERNFEDIDVG 82

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL+  E+D  I Q+    +Q ++  +   Q E +L+   D N+AYL +H GAGGTES D
Sbjct: 83  IELS--EEDPGIAQDIEKIVQEVEKNIRRFQLELILNDPLDQNNAYLSIHPGAGGTESHD 140

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMY RWAE++ F  E L+   GEEAG+KSAT+L+KG  AYG+LK E+GVHRLVR
Sbjct: 141 WAQMLLRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYLKHERGVHRLVR 200

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+S+ V P + D I++EI   D RIDT+RASG GGQ+VN TDSAVRI
Sbjct: 201 ISPFDAAKRRHTSFASVNVVPEISDDIDVEIKPEDIRIDTFRASGHGGQYVNRTDSAVRI 260

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV CQ ERSQH+NKA A  +L+AKLY+LEL KR E  +  +    EI WG QI
Sbjct: 261 THLPTGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQGELKEISWGNQI 320

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSY+LQPY +VKD RT+IE  +   VLDG+LD F++A L
Sbjct: 321 RSYILQPYTLVKDHRTDIETGNFDAVLDGELDQFIEAEL 359


>gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42]
 gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY]
 gi|229576664|sp|A1W9H4|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790913|sp|B9MBK7|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp.
           JS42]
 gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
          Length = 367

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 236/338 (69%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  ++++   L DN  L 
Sbjct: 27  LDYDAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKLTTELADNAELY 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E++ EE D + L       ++++  +E  +F  + S EAD  + ++++ AGAGGTE+ DW
Sbjct: 87  EMSKEEGDEAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDIQAGAGGTEACDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+ E GVHRLVR 
Sbjct: 147 ASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+  RHTSF+S++VYP +DDSIEI I+ SD R DTYRASGAGGQH+N TDSAVR+T
Sbjct: 207 SPFDSSGGRHTSFASLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E     E +KT++GWG QIR
Sbjct: 267 HIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDTKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363


>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 369

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 177/326 (54%), Positives = 231/326 (70%), Gaps = 6/326 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSILQET 88
           DP+ W +  +A+ +   R +L   +  I  + ++   L D + LLE+   E+D  +  E 
Sbjct: 42  DPNFWNDTKKAQEISSRRNYLGEKLEEILTVDEKINNLLDYITLLEM---EEDQELYNEV 98

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L+ I+ E+   +  SLLS E DS +A L V AG+GG E+ DW  MLLRMYTRWAEKR
Sbjct: 99  EKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAGSGGVEACDWTEMLLRMYTRWAEKR 158

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            ++ E ++    + AG+KSAT++IKGP AYG+LKGEQGVHRLVRISP+D+N RRHTSFS+
Sbjct: 159 GYQVELVDFQPDDVAGVKSATVIIKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSA 218

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +D+ I++EI+E D RIDTYRA GAGGQHVN TDSAVRITHIPTG+VV CQ ERS
Sbjct: 219 VSVIPEIDEDIKVEINEEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQSERS 278

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A NML+AKLY+LEL+KR+E     E  K +I WG QIRSYV QPYQMVKDLRT
Sbjct: 279 QLQNKLKAMNMLKAKLYQLELEKRKEKQKELEGEKKDITWGSQIRSYVFQPYQMVKDLRT 338

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
             E  +   V+DG++DDF+++ L  K
Sbjct: 339 GFETGNIEAVMDGEIDDFIESYLKWK 364


>gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
 gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
          Length = 367

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 237/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I++ + DN  L+
Sbjct: 27  MDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIENGIADNRELI 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 87  DMVVEENDADGFAAIVADVAALEQQMADLEFKRMFNQPADPNNCFVDITAGAGGTEAEDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTR+AE++ FK E +E  DGE AGI +ATL I+G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLRTETGVHRLVRY 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH+N TDSAVRIT
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRIT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VVQ Q  RSQH+N+     MLRAKL+ELE++KR E     E  K+++GWG QIR
Sbjct: 267 HLPTGIVVQSQSSRSQHENRRIVMEMLRAKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
 gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
          Length = 354

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 175/344 (50%), Positives = 227/344 (65%), Gaps = 2/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD+D   + +S    K  +P  W +   A+ ++ E   L         +   L D
Sbjct: 2   ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             + LEL  E+ D  +  E      ++K +++  Q   LL+G+ D N+A LE+H GAGGT
Sbjct: 62  LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +MLLRMYTRWAE   FK + L+   GE AGI S ++LI G NAYG+L+ E+GVH
Sbjct: 122 EAQDWGSMLLRMYTRWAESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF+S+ V P +DD + I+IS  + ++D YRASGAGGQHVN T S
Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307
           AVRITHIPTG+VV  Q +RSQ +N+  A NML++KLYELE QK+ EE A I E  + +IG
Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKI-EGEQLDIG 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L
Sbjct: 301 WGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYL 344


>gi|57239093|ref|YP_180229.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161172|emb|CAH58086.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 367

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 178/355 (50%), Positives = 245/355 (69%), Gaps = 2/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L++ L  + G  D DN    L  LNTK  D  LW + + A  ++ ER  +   +    
Sbjct: 12  VNLNKALQLIRGYLDIDNLTSLLVDLNTKCADTSLWNDNLTAHHVLSERARISKIVGLFT 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++       LL + +  D  S+L + S  L+ +K +V+ K+ E L S EAD ND ++E
Sbjct: 72  ELEEEYQYYNELLSV-ISNDSDSLLDDLSKGLEALKEKVKKKEVECLFSDEADQNDCFIE 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           + +GAGGTES DW+NMLLRMY RWAE    FKT+ +   DGEE G+KSA + + G NAYG
Sbjct: 131 IQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGVKSAIIKVIGYNAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + D RIDTYRASGAG
Sbjct: 191 WSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHDKDLRIDTYRASGAG 250

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N  +A+N+LR++LY+L+LQ++E+     
Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLYQLKLQEKEKKMAQE 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            S + +IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDGDLD F+ ATL  K
Sbjct: 311 HSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDAFIIATLTKK 365


>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
 gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
          Length = 373

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 171/331 (51%), Positives = 233/331 (70%), Gaps = 2/331 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  +P  W ++  ++ ++++ + L   I     I  +  D   L EL LEE D S++
Sbjct: 37  LEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNITSQWEDLFTLSELGLEEQDESVI 96

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + LQ +K  +E  + E+LL+G  D N+A L +HAGAGGTE+QDW  MLLRM+TRW 
Sbjct: 97  PEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFTRWG 156

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + ++ + L+  DG+EAGIKS T+ + G NAYG+LK E+GVHRLVRISP+DS+ RRHTS
Sbjct: 157 EAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGVHRLVRISPFDSSGRRHTS 216

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S  V P +DD+IEI I+  D R+DTYRASGAGGQH+N TDSA+RITHIPTGVVV CQ 
Sbjct: 217 FASADVMPELDDTIEININPDDLRVDTYRASGAGGQHINKTDSAIRITHIPTGVVVSCQT 276

Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ +NK  A  ML+AKL+EL E +++E+I ++ +  + EI WG QIRSYV  PY +VK
Sbjct: 277 ERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDL-KGVQMEIAWGSQIRSYVFCPYTLVK 335

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           D RTN E+ +   V+DG+LD F+ A L+++K
Sbjct: 336 DHRTNYEEGNVDAVMDGELDGFINAYLSMEK 366


>gi|148549433|ref|YP_001269535.1| peptide chain release factor 2 [Pseudomonas putida F1]
 gi|148513491|gb|ABQ80351.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           putida F1]
          Length = 304

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 166/300 (55%), Positives = 220/300 (73%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++   L D   LL++A+EE+D + + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSGGLADCKDLLDMAVEENDENAVSDVVTELEGLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL   + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 300


>gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
 gi|167652486|gb|EDR96615.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 367

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 181/347 (52%), Positives = 239/347 (68%), Gaps = 2/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L G    +   +R+  L    E P  W+++ E++ ++RE + L + +   + ++ + 
Sbjct: 18  LEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQVEGYEGLKGQF 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L+E+A EE+D  +  ET +     +   E  +  +LLSGE D N+A L +HAGAG
Sbjct: 78  EDIETLIEMASEEEDEELAAETQEAFAEFETAYENLRISTLLSGEYDKNNAILSLHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA ML RMYTRWA K+ F+T+ ++  DG+EAGIKS T+ IKG NAYG+L+ E+G
Sbjct: 138 GTESCDWAGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKSVTVEIKGENAYGYLRSERG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+++  +R TSF+S  V P +D+ + +EI++ D RIDTYRASGAGGQH+N T
Sbjct: 198 VHRLVRISPFNAAGKRQTSFASCDVMPEIDEDLNVEIADEDIRIDTYRASGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTE 305
           DSA+RITHIPTG+VVQCQ ERSQHKNK QA  ML+ KLY L E Q  E++++I      +
Sbjct: 258 DSAIRITHIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDI-RGDVGD 316

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            GWG QIRSYVLQPY MVKD RTN E  +PS VLDGDLD FM A LA
Sbjct: 317 NGWGSQIRSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGFMNAYLA 363


>gi|329296879|ref|ZP_08254215.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 293

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 170/290 (58%), Positives = 214/290 (73%), Gaps = 1/290 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  L D   LLELA+E DD     E    L  + +++   +F  + SGE DS D Y+++
Sbjct: 1   MQQGLEDVQGLLELAVEADDEETFNEAVVELDALDVKLGELEFRRMFSGEYDSADCYMDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG KSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGTKSATIKIIGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS+++YP VDDSI+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDSIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E 
Sbjct: 181 HVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQAAEE 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 241 NKSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289


>gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
 gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
          Length = 338

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 171/330 (51%), Positives = 227/330 (68%), Gaps = 2/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL++A +E D   L
Sbjct: 4   LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSEFL 62

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
                 L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY RWA
Sbjct: 63  DGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVRWA 122

Query: 146 EK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
                F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRRHT
Sbjct: 123 GTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ
Sbjct: 183 SFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
             RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+MVK
Sbjct: 243 TSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVK 302

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           DLRT  E      VLDGDLD F+ A L  K
Sbjct: 303 DLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 346

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 178/345 (51%), Positives = 243/345 (70%), Gaps = 3/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +N  G +FD+D   +RL+ +  + ED  +W N   A+ L R++  L+N +   + I + L
Sbjct: 1   MNLYGTIFDYDVKKERLTEVLMELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                LLELA E+   S++QE + + Q +  E+E  +F  + SG+ D N+A+L++ +G+G
Sbjct: 61  ETLTELLELAEED--ESLMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G
Sbjct: 119 GTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN T
Sbjct: 179 IHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE+ELQKR    N  E SK +I
Sbjct: 239 DSAVRITHIPTNIVVQSQSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADI 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E T+   VLDGDLD F++A+L
Sbjct: 299 GWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKFIEASL 342


>gi|307546434|ref|YP_003898913.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
 gi|307218458|emb|CBV43728.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
          Length = 301

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 215/296 (72%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  ++  L DN  LLELA  E+D   + E S  L+ ++ ++E  +F  + +GE D N
Sbjct: 3   VDTIDTLERGLNDNRDLLELAEMEEDADTVDEVSRELESLRADLEKLEFRRMFAGEMDPN 62

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWANMLLRMY RWAE   FK + +E+  GE AGIKSAT+ I+G 
Sbjct: 63  NAYLDIQAGSGGTEAQDWANMLLRMYLRWAEHHGFKADLIELSAGEVAGIKSATVHIQGE 122

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSF+S+++ P VDDS E+EI+ SD R+DTYR+
Sbjct: 123 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFEVEINPSDLRVDTYRS 182

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH PTG+VV CQ +RSQH N+  A   LRAKL+E E+ KR   
Sbjct: 183 SGAGGQHVNTTDSAVRITHEPTGIVVACQSQRSQHANRDFAMKQLRAKLWEHEMDKRNAA 242

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               E SK +IGWG QIRSYVL   Q +KDLRT ++ +S   VLDGDLD F++A+L
Sbjct: 243 KQAAEDSKADIGWGSQIRSYVLDD-QRIKDLRTGVQSSSCEKVLDGDLDQFIEASL 297


>gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
          Length = 369

 Score =  344 bits (882), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 243/349 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++ + L G  D +    RL+ +      P  WQN  ++  +++ER  L + ++  +E 
Sbjct: 15  LSQRYSQLRGRLDLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALTHLLTVWQEQ 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D  +LLELA EE D     +   +L+  +  ++  + E LL GE D  DA + +H
Sbjct: 75  GKKIEDLEVLLELAQEETDEQAFVDVLTDLKVQERALQQLELEMLLGGEDDDKDAIITIH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMY R+AE++ F+TE  ++  G+EAG+KS+T  + GP+AYG+LK
Sbjct: 135 AGAGGTEAQDWAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVSGPHAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D++ RRHTSF++++VYP  D+ I+I++ E D RIDT+RASGAGGQH
Sbjct: 195 SESGIHRLVRISPFDASGRRHTSFAAVFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+THIPTG+VV  Q ERSQH+N+  A  +L+++LYELE  KR+E A +   +
Sbjct: 255 VNKTSSAVRLTHIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKRQEKAQVVLDA 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +I WG QIRSYVLQPY+++KD RT  E+ +   VLDGDLD F++A L
Sbjct: 315 QKDIAWGSQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363


>gi|300781808|ref|YP_003778203.1| hypothetical protein PSPTO_1500 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|290758052|gb|ADD53002.1| protein of unknown function [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 293

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 164/286 (57%), Positives = 216/286 (75%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+
Sbjct: 5   LVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAGS 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E 
Sbjct: 65  GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNT
Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNT 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++
Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 289


>gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
 gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
          Length = 310

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/307 (56%), Positives = 220/307 (71%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  ++ I E+   L D   LLELA+E DD     E    L+ +  ++   +F
Sbjct: 1   MGKERSSLEEIVTTIDELAQGLEDVSGLLELAIEADDEETFDEAVAELEILDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQMLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
 gi|259585245|sp|C4L5K9|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
          Length = 366

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 174/330 (52%), Positives = 228/330 (69%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +   P  W N  +A+ ++ E   L   +   +++ ++  D  + LEL  EE D
Sbjct: 32  RIAELENEMTYPDFWDNQEKAQKVIDESNGLKAMVDKYQDLANQHEDGEVTLELIKEEPD 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E  +++Q +K E +  + E LL+G  D+N+A LE+H GAGGTESQDWA+MLLRMY
Sbjct: 92  AEMQEELGESIQALKKEFDDFELEILLNGPYDANNAILELHPGAGGTESQDWASMLLRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+A+K+ +K E ++   GEEAG+KS TL I G NAYG+LK E+G+HRLVRISP+DS+ R
Sbjct: 152 QRFADKQGWKVETVDYLPGEEAGVKSVTLRIVGHNAYGYLKAEKGIHRLVRISPFDSSGR 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S  V P  DD IEIE+   D RIDTYRASGAGGQH+NTTDSAVRITH+PTGVVV
Sbjct: 212 RHTSFVSCDVMPEFDDDIEIEVRTEDLRIDTYRASGAGGQHINTTDSAVRITHVPTGVVV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+  A  ML+AKLY+ EL +++   +     KT+IGWG QIRSYV  PY 
Sbjct: 272 SCQTERSQIKNRESAMKMLKAKLYQRELDEQQRKLDEIRGEKTDIGWGSQIRSYVFHPYS 331

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKD RTN E  + S V+DGD+  F+ A L
Sbjct: 332 MVKDHRTNYEVGNTSGVMDGDVMPFIDAYL 361


>gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
 gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
          Length = 371

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/347 (48%), Positives = 236/347 (68%), Gaps = 1/347 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +++ L G  + D+  +R+  L   T  P  W +   A+ ++R R  ++  ++  + 
Sbjct: 11  ELTERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL  EE D + L E +    +++  V   +F  +LSG  D++ A++ +
Sbjct: 71  LDKQARDIKELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA MLLRMY R+ EK+ +KTE  +  +G+ AG+K  T  + G  AYG+L
Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-SDCRIDTYRASGAGG 240
           K E G+HRLVRISP+DS++RRHTSF+S +V+PV+++         SD RIDTYR+SGAGG
Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+   
Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+
Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFV 357


>gi|183599838|ref|ZP_02961331.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
 gi|188022110|gb|EDU60150.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
          Length = 293

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 210/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E  + L +++ ++E  +F  + SGE DS D Y+++ AG+GGTE+Q
Sbjct: 11  LLELAIEADDEDTFNEAGEELTQLQAKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE + FKTE +E  DG+ AG+KSAT+ + G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKVIGDYAYGWLRTESGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 289


>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
           BON]
 gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
           australiensis 50-1 BON]
          Length = 353

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/347 (50%), Positives = 237/347 (68%), Gaps = 8/347 (2%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD     + +  L  +  DP  W ++  ++ + +  + L + +  ++ ++ +  D  
Sbjct: 4   GLLFDPAGMEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLR 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L +L  EEDD SI+ E +  L  ++ EVE  + E+LLSG  D N+A + +HAGAGGTE+
Sbjct: 64  TLADLGREEDDASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMYTRWAE + +K E L++ +G+EAGIKS T L++G NAYG+LK E+GVHRL
Sbjct: 124 QDWVQMLYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+  RRHTSF+S+ V P +DD   +EI+  D +IDTYR+SGAGGQHVN T+SA+
Sbjct: 184 VRISPFDAAGRRHTSFASVDVMPELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAI 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI----GESSKTEI 306
           RITHIPTG+VVQCQ ERSQH NK  A  ML+AKL  LEL+++EE A I    GE  + E 
Sbjct: 244 RITHIPTGIVVQCQNERSQHSNKETAMKMLKAKL--LELKEQEEQAKISDIKGELKRIE- 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSY+ QPY MVKD RTN E  + + V+DGD+D F+   L +
Sbjct: 301 -WGSQIRSYIFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLKM 346


>gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
 gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
          Length = 310

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/307 (56%), Positives = 219/307 (71%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  ++ I ++   + D   LLELA+E DD     E    L  +  ++   +F
Sbjct: 1   MGKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 IKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
 gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Puerto Rico]
 gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
          Length = 338

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/330 (51%), Positives = 227/330 (68%), Gaps = 2/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL++A +E D   L
Sbjct: 4   LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSEFL 62

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
                 L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY RWA
Sbjct: 63  DGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWA 122

Query: 146 EK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
                F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRRHT
Sbjct: 123 GTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ
Sbjct: 183 SFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
             RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+MVK
Sbjct: 243 TSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVK 302

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           DLRT  E      VLDGDLD F+ A L  K
Sbjct: 303 DLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
 gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
          Length = 362

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/342 (51%), Positives = 229/342 (66%), Gaps = 2/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD D   + +S    K  +P  W +  +A+ ++ E   L       K + D + +  
Sbjct: 12  GGLFDLDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLE 71

Query: 71  ILLELALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           + LEL   E D  +  E  D L Q  KL  +Y+    LL+G+ D+N+A LE+H GAGGTE
Sbjct: 72  VTLELLEMEADPDVQAEFEDELSQTAKLLRDYR-LGLLLNGKYDANNAILEIHPGAGGTE 130

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDW +MLLRMYTRWAE+ +FK +  +   GE AGI S T+ + G NAYG+L+ E+GVHR
Sbjct: 131 SQDWGSMLLRMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHR 190

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR+SP+DS  RRHTSF+S+ V P +DDS+E+ I+  D R+D YR+SGAGGQH+N T SA
Sbjct: 191 LVRLSPFDSAGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSA 250

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV  Q ERSQ +N+  A NML+AKL+ELE QK+ E     E ++ EIGWG
Sbjct: 251 VRITHLPTGIVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWG 310

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV  PY MVKD RTN+E  +   V+DGDLDDF+ A L
Sbjct: 311 SQIRSYVFHPYSMVKDHRTNLETANVQGVMDGDLDDFINAYL 352


>gi|109897685|ref|YP_660940.1| peptide chain release factor 2 [Pseudoalteromonas atlantica T6c]
 gi|109699966|gb|ABG39886.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudoalteromonas
           atlantica T6c]
          Length = 348

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/345 (53%), Positives = 240/345 (69%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GG FD+D   +RL  +N + E P +W     A+ L +E+  L+  +  I  ++   
Sbjct: 1   MHRFGGTFDYDQKNERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGC 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +   LLELA+EE D   L E   +L  +   +E  +F  + SG  D+ND Y+++ +G+G
Sbjct: 61  VEVEELLELAVEESDQETLDEAEKDLAELVSRLETLEFRRMFSGPNDANDGYIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+MLLRMY RW E   FKTE +E+ DG+ AGIKSAT+  +G  A+GWL+ E G
Sbjct: 121 GTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I  SD RIDTYRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PT +VVQCQ +RSQHKNKAQA   L+AKLYE E+QK+ E     E SK++I
Sbjct: 241 DSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQTMEDSKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 301 GWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIQASL 344


>gi|289626068|ref|ZP_06459022.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289646233|ref|ZP_06477576.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 293

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 164/286 (57%), Positives = 216/286 (75%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+
Sbjct: 5   LADAKDLLLMSAEEEDQAAVDDVATEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQAGS 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E 
Sbjct: 65  GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNT
Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNT 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++
Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 289


>gi|238759279|ref|ZP_04620445.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
 gi|238702440|gb|EEP94991.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
          Length = 310

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 171/307 (55%), Positives = 219/307 (71%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +S I ++   + D   LLELA+E DD     E    L  +  ++   +F
Sbjct: 1   MGKERSALEEIVSTIDQLDQGMEDVSGLLELAIEADDEETFNEAVAELDTLDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 KFIEASL 306


>gi|298488301|ref|ZP_07006333.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157123|gb|EFH98211.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 293

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 164/286 (57%), Positives = 216/286 (75%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+
Sbjct: 5   LADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQAGS 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E 
Sbjct: 65  GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNT
Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNT 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++
Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 289


>gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 342

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 167/339 (49%), Positives = 234/339 (69%), Gaps = 1/339 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  + ++   L DN  L
Sbjct: 1   MFDYDAKAERLRTVNASLEDPSVWNDPKKAQELGKEKKMLDGVVVTLNDLTSNLSDNTEL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E++ EE D   L        ++   VE  +F  + +  AD    +L++ AGAGGTE+ D
Sbjct: 61  YEMSKEEGDEESLLTIETETAKLTEIVEGLEFRRMFNNPADPLPCFLDIQAGAGGTEACD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLR Y ++AE++ F     ++ DG+ AGIKSAT+ I G  A+G L+ E GVHRLVR
Sbjct: 121 WASMLLRQYLKYAERKGFTANVEDLTDGDTAGIKSATIKIDGEYAFGHLRTETGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS+  RHTSF+S++VYP +DDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+
Sbjct: 181 KSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRL 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ EL+KR+E     E +KT++GWG QI
Sbjct: 241 THIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKRQEEQQKLEDTKTDVGWGHQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 301 RSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIQASL 338


>gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
 gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
          Length = 329

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 172/317 (54%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L  
Sbjct: 1   MWNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTALAVIADLDN 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            +  VE  +F+ + SG+ DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE 
Sbjct: 61  YQAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P 
Sbjct: 121 MEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+ 
Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL   + +KDLRT IE++ 
Sbjct: 241 NAMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD+F++A+L
Sbjct: 300 TQKVLDGDLDEFVEASL 316


>gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13]
          Length = 326

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 172/323 (53%), Positives = 219/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A++++ E   L   +    E+ +   +  +  EL  EE D  +  E    
Sbjct: 3   NPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKEEPDAELQAELGSE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++ +  +    + + LLSGE D N+A LE+H GAGGTESQDW ++LLRMYTRWAE++ FK
Sbjct: 63  VKTVAEDFNKFELQLLLSGEHDKNNAILELHPGAGGTESQDWGSLLLRMYTRWAERKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  DD+IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFDDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+ +L +++   +     + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDLD F+ A L  K
Sbjct: 303 VGNTQAVMDGDLDPFIDAYLRSK 325


>gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4]
 gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4]
          Length = 377

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 168/353 (47%), Positives = 240/353 (67%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  L    D     +RL+ L  + E P  W+++  A+ + +E   L   +     +
Sbjct: 12  LAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   +  +LLELA EE D  +L E + +++++  E+E  + E LLSG  D+++A + +H
Sbjct: 72  REGHEELSVLLELAAEEGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYDASNAIVSLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDW  MLLRMY RWAE   ++   L++  GEEAGIKS T  + GP AYG+LK
Sbjct: 132 AGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRL+RISP+D++ RRHTSF+S+ V P V D  EI+I+  + RIDT+RASGAGGQH
Sbjct: 192 AERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDDTEIKIAPEELRIDTFRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGES 301
           VN T++AVRITH+PTG+ V CQ ERSQ  NKA A  +LRA+L +L++++RE E+A +   
Sbjct: 252 VNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALRGE 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K EI WG QIR+YVL PY +VKD RT +E+     VLDGD+DDF++A L ++
Sbjct: 312 VK-EIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVE 363


>gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
 gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
          Length = 373

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 170/331 (51%), Positives = 233/331 (70%), Gaps = 2/331 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  +P  W ++  ++ ++++ + L   I     I  +  D   L EL LEE D S++
Sbjct: 37  LEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNITSQWEDLFTLAELGLEEQDESVI 96

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L ++K  +E  + E+LL+G  D N+A L +HAGAGGTE+QDW  MLLRM+TRW 
Sbjct: 97  PEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFTRWG 156

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + ++ + L+  DG+EAGIKS T+ + G NAYG+LK E+GVHRLVRISP+DS+ RRHTS
Sbjct: 157 EAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGVHRLVRISPFDSSGRRHTS 216

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IEI I+  D RIDTYRASGAGGQH+N TDSA+RITHIPTGVVV CQ 
Sbjct: 217 FASLDVMPELDDTIEININPDDLRIDTYRASGAGGQHINKTDSAIRITHIPTGVVVSCQT 276

Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ +NK  A  ML+AKL+EL E +++E+I ++ +  + +I WG QIRSYV  PY +VK
Sbjct: 277 ERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDL-KGVQMDIAWGSQIRSYVFCPYTLVK 335

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           D RTN E+ +   V+DG+LD F+ A L++ K
Sbjct: 336 DHRTNYEEGNVDAVMDGELDGFINAYLSVGK 366


>gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
 gi|259585228|sp|C5CGS4|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
          Length = 370

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 178/339 (52%), Positives = 236/339 (69%), Gaps = 6/339 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D   ++LS +  +  DP +W +   A  L ++ Q L + +  + ++Q+ L +N I + 
Sbjct: 25  DVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNKVQE-LFEN-IDIA 82

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + L E+D S L+  ++ L+  +  V+  +   LLS   D+ +AYL VH GAGGTESQDWA
Sbjct: 83  VELSEEDESYLENLNELLKEAEDMVKEFELNILLSSPYDAYNAYLSVHPGAGGTESQDWA 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMY RWAE+  +K   +E   GEEAGIKSAT+ I GP AYG LK E GVHRLVRIS
Sbjct: 143 SMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKLKYEAGVHRLVRIS 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+N RRHTSF+S+ V+P +DD +EI+I   D +IDTYRA GAGGQHVN T+SAVRITH
Sbjct: 203 PFDANHRRHTSFASVSVFPEMDDDVEIDIRPEDLKIDTYRAGGAGGQHVNRTESAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQI 312
           IPTG+VV CQ ERSQH+NKA A  +L+AKL+ELEL+K+  E++  +GE  + +I WG QI
Sbjct: 263 IPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMGE--QKDIAWGNQI 320

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV QPY MVKD RTN E      V+DG +DDF++  L
Sbjct: 321 RSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKEL 359


>gi|319779400|ref|YP_004130313.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
 gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
          Length = 327

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 167/321 (52%), Positives = 239/321 (74%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           EDP++W +  +A+ L +E++ L++ +  + E++  + D+  L  LALE++D S L    +
Sbjct: 4   EDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDSTLIAIEE 63

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + ++   ++E  +F  + S  AD  + ++++  GAGGTE+QDWA+MLLR Y R+ E++ F
Sbjct: 64  DSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRYCERKGF 123

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE LE   G+ AGIKSAT+ ++G  A+G L+ E GVHRLVR SP+DS + RHTSF+S++
Sbjct: 124 KTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRHTSFASLY 183

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VVQCQ +RSQH
Sbjct: 184 VYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQH 243

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NKA+A +ML++KLYELEL+KR       E SK+++GWG QIRSYVL   + +KDLRTN+
Sbjct: 244 RNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVLDQSR-IKDLRTNV 302

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   VLDGDLD F++A+L
Sbjct: 303 EVSNTQKVLDGDLDMFIEASL 323


>gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 336

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 164/334 (49%), Positives = 232/334 (69%), Gaps = 1/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L ++T D +LWQ+  +A+ +++E   + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++ K+ + L + EAD+ND +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +G+  GIKSA + I G  AYGW K E G+HRLVRISP+D+NS
Sbjct: 122 IRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDANS 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF SI V PV++DSI+I + E   +IDTYRASGAGGQHVN T+SAVR+THIPTGV+
Sbjct: 182 KRHTSFVSIGVTPVIEDSIDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTGVI 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY+++L+K+E+        K  IGWG QIRSYV+ PY
Sbjct: 242 VQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QMVKDLRT  E  + + + DG++D F+   L  K
Sbjct: 302 QMVKDLRTGYEVGNINSIFDGNIDCFIVNVLTNK 335


>gi|261345593|ref|ZP_05973237.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
 gi|282566073|gb|EFB71608.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
          Length = 299

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 166/280 (59%), Positives = 211/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     ET   L++++ ++E  +F  + SGE DS + Y+++ AG+GGTE+Q
Sbjct: 17  LLELAIEADDEETFNETDAELEQLQGKLEQLEFRRMFSGEYDSANCYIDLQAGSGGTEAQ 76

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 77  DWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLV 136

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 137 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 196

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG Q
Sbjct: 197 ITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEIQKKNADKQAMEENKSDIGWGSQ 256

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 257 IRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 295


>gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 349

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 177/344 (51%), Positives = 232/344 (67%), Gaps = 4/344 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +  ++++ L T +  P  WQN   A+ +++E +     IS  K++ +   D L
Sbjct: 4   GDLFDVTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYEDVL 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+++ +EE D  +  E   +        +  +  +LL GE D NDA + +HAGAGGTE+
Sbjct: 64  VLIDMGIEEHDADMCAEAISDANSFIEFYDNLRTSTLLDGEYDKNDAIISLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW NMLLRMYTRWAEK  FK++ L+I DGEEAG+KSATL I G NAYG+LK E+G+HRL
Sbjct: 124 CDWNNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLKSEKGIHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF+S+ V P +DD+ EI I+  D +IDTYR+SGAGGQHVNTTDSAV
Sbjct: 184 VRISPFDSGGRRHTSFASLDVMPKIDDTAEITINPEDLQIDTYRSSGAGGQHVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGW 308
           RITH P+G+VVQCQ ERSQ +N+     ML +KL  L  Q +E++  I E    K +I W
Sbjct: 244 RITHKPSGIVVQCQNERSQIQNRETCMKMLASKL--LYKQHQEQLLKIDEIRGEKKDIAW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYV  PY MVKD RTN E  +   V+DGD+D F+ A LA
Sbjct: 302 GSQIRSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLA 345


>gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 343

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 171/325 (52%), Positives = 226/325 (69%), Gaps = 4/325 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSD 90
           DP+LW N   ++ +MRER+ L++A++  K++  R  D     +LA E ED  + L+   D
Sbjct: 10  DPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGEDITADLRREMD 69

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ I   VE  + E+LLSG++D   A + +H GAGGTESQDWA MLLRMY RWAE++ F
Sbjct: 70  QLRDI---VEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLLRMYLRWAERQGF 126

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +T   +   GEEAG+KS T+ + G +AYG L  E GVHRLVRISP+D   RRHTSF+S++
Sbjct: 127 ETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQAKRRHTSFASVF 186

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +D+SIE+ +   D R DTYR+ G GGQHVNTTDSAVRITH PTG+VV CQ ERSQH
Sbjct: 187 VSPEIDESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTGIVVSCQNERSQH 246

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+ +A  +LR+K+YE EL+K+   +   E SK +I +G QIRSYVL PY+MVKD RT  
Sbjct: 247 KNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDIDFGSQIRSYVLHPYRMVKDHRTKF 306

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
           E   P  VLDGDL  F++A L +++
Sbjct: 307 EVGDPDRVLDGDLKGFIRAYLLMRR 331


>gi|170725301|ref|YP_001759327.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
 gi|238688657|sp|B1KFR6|RF2_SHEWM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169810648|gb|ACA85232.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
          Length = 365

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 172/342 (50%), Positives = 235/342 (68%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G+FD+D   +RL  ++ + E   +W N   A+ L +ER  L+  +  I ++   L D 
Sbjct: 21  LRGIFDYDAKKERLEEVSAELESSEVWNNPENAQALGKERSALELVVKTIDDMDSGLEDV 80

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+EE+D     + S  L  ++  +E  +F  + SG  D +D YL++ +G+GGTE
Sbjct: 81  EGLVELAVEEEDEETFADASSELDALEKRLEELEFRRMFSGPHDISDCYLDIQSGSGGTE 140

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRM+ RW E   +K E +E+ DG+ AGIK AT+   G  A+G L+ E GVHR
Sbjct: 141 AQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHR 200

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 201 LVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESA 260

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E +K++IGWG
Sbjct: 261 IRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQQAEDAKSDIGWG 320

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 321 SQIRSYVLDDAR-IKDLRTGVESRNTQSVLDGDLDKFIEASL 361


>gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223624|sp|A0RQM7|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 369

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 164/323 (50%), Positives = 219/323 (67%), Gaps = 2/323 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W ++ +A  + +E+  + N +   K ++  + D   L ELA  EDD   +    ++ 
Sbjct: 43  PEFWNDIKKASEIGKEKTKISNMLCKFKNVKSAISDAYELYELANAEDDEQTINSLFEDA 102

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           Q ++ ++   +   +LSGE DS +A + +H GAGGTES DWA+ML RMY R+ E+  FK 
Sbjct: 103 QNLENKITNLEISMMLSGEDDSKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKV 162

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+  +G+EAG+K  + ++KG NAYG+LK E G+HRLVR SP+DS  RRHTSFSS+ V 
Sbjct: 163 ETLDFQEGDEAGLKDVSFIVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVS 222

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P VDD I IEI E D R+D YRASGAGGQHVN T+SAVRITHIPTG+VVQCQ +RSQHKN
Sbjct: 223 PEVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPTGIVVQCQNDRSQHKN 282

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           KA A  ML+++LYE EL K++E  N  E  K+EIGWG QIRSYVL PYQ VKD R+    
Sbjct: 283 KATAMKMLKSRLYEFELMKQQEANNAIE--KSEIGWGHQIRSYVLFPYQQVKDTRSGEAY 340

Query: 333 TSPSDVLDGDLDDFMKATLAIKK 355
           +    +LDGD+   +++ L  +K
Sbjct: 341 SQTDAILDGDIKKIIESVLISQK 363


>gi|34556562|ref|NP_906377.1| peptide chain release factor 2 [Wolinella succinogenes DSM 1740]
 gi|81833248|sp|Q7MAP4|RF2_WOLSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|34482276|emb|CAE09277.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Wolinella succinogenes]
          Length = 368

 Score =  342 bits (878), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 178/353 (50%), Positives = 244/353 (69%), Gaps = 8/353 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS + + +  +   D+   RL  +         W +  +A  + +E++ L+  +   +E
Sbjct: 12  ELSTKRDNIAKIIKPDSIENRLGEIEALEHSEGFWNDATKAGEVQKEKRKLERILKKYEE 71

Query: 62  IQDRLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
               + D   L E+A +++D     +L E S +L++   E++  + E +LSGE D ++A 
Sbjct: 72  ANQAINDAKELFEIATQDNDEETLGLLFEESGHLEK---EIKSVEIEVMLSGEHDGSNAI 128

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + +H GAGGTESQDWA++L RMY RWAE+R FK E L+  +GEEAGIK A+ +IKG NAY
Sbjct: 129 ITIHPGAGGTESQDWASILYRMYLRWAERRGFKVEVLDYQEGEEAGIKDASFIIKGENAY 188

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E G+HRLVRISP+D+N++RHTSF+S+ V P VDD I+IEI E D R+DTYRASGA
Sbjct: 189 GYLKVENGIHRLVRISPFDANAKRHTSFTSVMVSPEVDDDIDIEIEEKDLRLDTYRASGA 248

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL KR   A  
Sbjct: 249 GGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELAKRS--AEY 306

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGDLD+ ++  L
Sbjct: 307 DSMEKSEIGWGHQIRSYVLAPYQQVKDTRSNIAYSNIEAILDGDLDELLEGVL 359


>gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|166711947|ref|ZP_02243154.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzicola
           BLS256]
 gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 329

 Score =  342 bits (877), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 172/317 (54%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L +
Sbjct: 1   MWNDAERAQALGRERSMLEKTVIGIADVLSGLVDAGDLLELAESEQDEDTALAVIADLDK 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            +  VE  +FE + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE 
Sbjct: 61  YQTHVEKLEFERMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P 
Sbjct: 121 MEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+ 
Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL   + +KDLRT IE++ 
Sbjct: 241 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD+F++A+L
Sbjct: 300 TQKVLDGDLDEFVEASL 316


>gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
 gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
          Length = 327

 Score =  342 bits (877), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 218/320 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N+  A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
 gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
          Length = 366

 Score =  342 bits (877), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 172/352 (48%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++LN   G  D +    R++ L     DP  W N   A+ ++ E   L   +   +E+
Sbjct: 13  MAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMVDTYREL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +  EL  EE D  +  +    ++ +  +    + + LLS   D N+A LE+H
Sbjct: 73  EAEQEDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY RWA+ + FK E L+   G+EAG+KS TL+I G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EIEIS    +IDTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIEISPDQLKIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PT  VV CQ ERSQ KN+ QA  ML+AKL++LE++++++  +     
Sbjct: 253 INTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQELDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +++IGWG QIRSYV  PY MVKD RTN E  +   V+DG+LD F+ A L  K
Sbjct: 313 QSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRSK 364


>gi|261212226|ref|ZP_05926512.1| peptide chain release factor 2 [Vibrio sp. RC341]
 gi|260838834|gb|EEX65485.1| peptide chain release factor 2 [Vibrio sp. RC341]
          Length = 300

 Score =  342 bits (877), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 167/289 (57%), Positives = 217/289 (75%), Gaps = 2/289 (0%)

Query: 64  DRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           DR  D++  LLELA+E +D     E    L  +++++E  +F  + SG+ DS+D YL++ 
Sbjct: 9   DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQ 68

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+
Sbjct: 69  AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 128

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH
Sbjct: 129 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 188

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +
Sbjct: 189 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 248

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 249 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 296


>gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28]
          Length = 366

 Score =  342 bits (877), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 176/350 (50%), Positives = 230/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++Q+    GLFD D+   R++ L  +  DP+ W +   A+ ++ E             
Sbjct: 12  KTAQQIKDFRGLFDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+
Sbjct: 72  LEEEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E        
Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 361


>gi|206601601|gb|EDZ38084.1| Peptide chain release factor 2 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 370

 Score =  342 bits (877), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 172/353 (48%), Positives = 237/353 (67%), Gaps = 5/353 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M  +R     GG+FD D     L  ++ +++ P  W++   A+ ++RE+  L+  +S I+
Sbjct: 1   MGKNRGFPRSGGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQ 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I     D   L ELA    D   L E S  +      V+  + E +LS     N A+LE
Sbjct: 61  GIDREDADIRALFELA---SDPDFLAELSRRVPEFSESVKAFELEEILSEAKSDNPAFLE 117

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA MLLRMY RWAE+     E ++I  GEEAGIKSAT+L++G +A+G+
Sbjct: 118 IHPGAGGTESQDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGY 177

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G+HRLVRISP+D+N RRHTSF+S++VYP ++D + +EI + D RIDT+RAS AGG
Sbjct: 178 LMSESGIHRLVRISPFDANKRRHTSFTSVFVYPELEDDVPVEIRDEDIRIDTFRASSAGG 237

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-- 298
           QHVN T SA+R+TH+PTG+V+  Q ERSQ +N+  A+ +LRAKLYELE ++++E  +   
Sbjct: 238 QHVNKTSSAIRLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKIS 297

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G  +K +IGWG QIRSYVLQPYQ++KD RT +E    S+VLDGDLD F++  L
Sbjct: 298 GAQNKKDIGWGHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYL 350


>gi|156932658|ref|YP_001436574.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530912|gb|ABU75738.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
          Length = 293

 Score =  342 bits (877), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 169/286 (59%), Positives = 210/286 (73%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   LLELA+E DD     E    L +++ ++   +F  + SGE DS D YL++ AG+
Sbjct: 5   LDDVAGLLELAVEADDEETFNEAVAELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGS 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  A+GWL+ E 
Sbjct: 65  GGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTET 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 125 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNR 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++
Sbjct: 185 TESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 245 IGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 289


>gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB]
 gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas
           aromatica RCB]
          Length = 325

 Score =  342 bits (877), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 165/322 (51%), Positives = 234/322 (72%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETS 89
           EDP +W +   A+ L RE++ L+N +  ++E+Q  L D   L ++  E+ D+ ++L   +
Sbjct: 2   EDPKIWDDAKRAQELGREKKSLENIVLVLEEVQSGLNDGRELFDMGKEDGDEDTLLSVEA 61

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           DN + ++ +V   +F  + +  +D    +LE+ AGAGGTE+QDWA+MLLRMY ++ EK+ 
Sbjct: 62  DNAE-LEKKVAALEFRRMFNNPSDPMPCFLEIQAGAGGTEAQDWASMLLRMYLKYGEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E +E  +G+ AG+KSAT+   G  AYG L+ E G+HRLVR SP+DSN+RRHTSF+S+
Sbjct: 121 FTVEVMEESEGDVAGLKSATVKFTGDYAYGTLRTETGIHRLVRKSPFDSNARRHTSFTSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V+P VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VVQCQ +RSQ
Sbjct: 181 FVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+N+ +AW MLRA++YE EL+K++      E +K++IGWG QIRSYVL   + +KDLRTN
Sbjct: 241 HRNRDEAWQMLRARIYEFELRKQQAEQQKLEDAKSDIGWGHQIRSYVLDQSR-IKDLRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  +   VLDGDLD F++A+L
Sbjct: 300 HETGNTQAVLDGDLDPFIEASL 321


>gi|126173117|ref|YP_001049266.1| peptide chain release factor 2 [Shewanella baltica OS155]
 gi|153002001|ref|YP_001367682.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304410531|ref|ZP_07392149.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|307304624|ref|ZP_07584374.1| peptide chain release factor 2 [Shewanella baltica BA175]
 gi|125996322|gb|ABN60397.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           baltica OS155]
 gi|151366619|gb|ABS09619.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304351015|gb|EFM15415.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|306912026|gb|EFN42450.1| peptide chain release factor 2 [Shewanella baltica BA175]
          Length = 352

 Score =  342 bits (876), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 175/342 (51%), Positives = 234/342 (68%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  S   VLDGDLD F++A+L
Sbjct: 308 SQIRSYVLDDAR-IKDLRTGVENRSTQAVLDGDLDKFIEASL 348


>gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
          Length = 367

 Score =  342 bits (876), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 173/357 (48%), Positives = 243/357 (68%), Gaps = 8/357 (2%)

Query: 2   KLSRQLNCLGG-------LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +L+ QLN L           D+     RL  +   +EDP LW +   A+ + +ER+ L+ 
Sbjct: 8   QLNNQLNDLAKRNDDIRVYMDYQGKKDRLEEVVGLSEDPDLWNDPKRAQDIGKERKLLEG 67

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  + +I + + DN  L+++ +EE D         ++  ++ ++   +F+ + +  AD 
Sbjct: 68  VVLTLDKITNGIDDNRELIDMVVEEGDADGFAAIIADVAELEKQMADLEFKRMFNQPADP 127

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+ ++++ AGAGGTE++DWA MLLRMYTR+AE++ FK E +E  DGE AGI +ATL I+G
Sbjct: 128 NNCFIDITAGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEG 187

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYG L+ E GVHRLVR SP+DSN++RHTSFSS++VYP VDDS E+EI+ +D R DTYR
Sbjct: 188 EYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYR 247

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQH+N TDSAVRITHIPTG+VVQ Q  RSQH+N+     MLR+KL+ELE++KR E
Sbjct: 248 ASGAGGQHINKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNE 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                E  K+++GWG QIRSYVL   + +KDLRT+ E  +   VLDGDLD F++A+L
Sbjct: 308 EKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTSYEVGNTKAVLDGDLDGFIEASL 363


>gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187]
 gi|259585231|sp|C4LCN9|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187]
          Length = 365

 Score =  342 bits (876), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 171/353 (48%), Positives = 239/353 (67%), Gaps = 7/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  ++ + E P +W     A+ L +ER  L++ ++ I  
Sbjct: 13  ELSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +     D  +L+ LA+E +D     E    +D L++  +++E+++   + SG+ D++D Y
Sbjct: 73  LTQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRR---MFSGQHDASDCY 129

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +G+GGTE+QDWA+M+LRMY RW E   +K E +E  DG+ AGIKSAT+   G  A+
Sbjct: 130 MDIQSGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAF 189

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           GWL+ E GVHRLVR SP+DS  RRHTSF S +VYP +D+ +EIEI+ +D RID YRASGA
Sbjct: 190 GWLRTETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGA 249

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITHIPT  V QCQ +RSQHKNK QA   L+AKLYELE+ K+      
Sbjct: 250 GGQHVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQA 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 310 LEETKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361


>gi|91794477|ref|YP_564128.1| peptide chain release factor 2 [Shewanella denitrificans OS217]
 gi|91716479|gb|ABE56405.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           denitrificans OS217]
          Length = 352

 Score =  342 bits (876), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 177/342 (51%), Positives = 233/342 (68%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+ N  +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYANKKERLEEVSLELESSAVWNEPERAQALGKERSALEAVVKTIDDLDSGLEDI 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+EEDD     E S  L  ++  +E  +F  + SG  DS D YL++ +G+GGTE
Sbjct: 68  EGLVELAIEEDDEDTFNEASAELDELERRLEDLEFRRMFSGPNDSADCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ S+ RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPSELRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ  RSQHKNK  A   L+AKLYELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQSGRSQHKNKDSAMKQLKAKLYELEMMKQNVDKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 308 SQIRSYVLDDAR-IKDLRTGVENRNTQTVLDGDLDKFIEASL 348


>gi|208434124|ref|YP_002265790.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
 gi|238054481|sp|B5Z9U4|RF2_HELPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|208432053|gb|ACI26924.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
          Length = 363

 Score =  342 bits (876), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 175/334 (52%), Positives = 239/334 (71%), Gaps = 2/334 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D + L    +    ++  V+  + E +LSGE D+++A + +  GAGGTESQDWA++L RM
Sbjct: 91  DETTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQDWASILYRM 150

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D+N+
Sbjct: 151 YLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFDANA 210

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PTG+V
Sbjct: 211 KRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIV 270

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL PY
Sbjct: 271 VQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVLAPY 328

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           Q VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 329 QQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
 gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
          Length = 335

 Score =  342 bits (876), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 174/332 (52%), Positives = 236/332 (71%), Gaps = 1/332 (0%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++RL  +N + E P +W    +A+ L +ER  L+  +  IK++   L D   LLELA+E 
Sbjct: 1   MERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEG 60

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           +D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLR
Sbjct: 61  EDQETFDEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLR 120

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN
Sbjct: 121 MYLRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSN 180

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           +RRHTSF++ +VYP +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+
Sbjct: 181 NRRHTSFAAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGI 240

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VVQCQ +RSQHKNK Q    L+AKLYE+ELQK+       E SK++IGWG QIRSYVL  
Sbjct: 241 VVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDD 300

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 301 SR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 331


>gi|254778885|ref|YP_003056990.1| peptide chain release factor 2 [Helicobacter pylori B38]
 gi|254000796|emb|CAX28720.1| Peptide chain release factor 2 (RF-2) [Helicobacter pylori B38]
          Length = 363

 Score =  342 bits (876), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 180/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ +D L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|15617035|ref|NP_240248.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681787|ref|YP_002468173.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471489|ref|ZP_05635488.1| peptide chain release factor 2 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|25299669|pir||F84980 peptide chain release factor 2 [imported] - Buchnera sp.  (strain
           APS)
 gi|10039100|dbj|BAB13134.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624630|gb|ACL30785.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311087327|gb|ADP67407.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  341 bits (875), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 161/345 (46%), Positives = 239/345 (69%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + +
Sbjct: 4   ILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKE 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GGT
Sbjct: 64  VVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGGT 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+H
Sbjct: 124 DAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+S
Sbjct: 184 RLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTES 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I W
Sbjct: 244 AVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITW 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSY+L   + +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 304 GNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|121587849|ref|ZP_01677606.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121728386|ref|ZP_01681414.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|147673826|ref|YP_001216157.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|153216950|ref|ZP_01950714.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|153801991|ref|ZP_01956577.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|153818695|ref|ZP_01971362.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|153822281|ref|ZP_01974948.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|153826509|ref|ZP_01979176.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|153829166|ref|ZP_01981833.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|227080844|ref|YP_002809395.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|229505715|ref|ZP_04395225.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229508711|ref|ZP_04398204.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229512924|ref|ZP_04402391.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229519540|ref|ZP_04408983.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229520954|ref|ZP_04410376.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229530470|ref|ZP_04419858.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229608734|ref|YP_002879382.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|254226529|ref|ZP_04920112.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|255743877|ref|ZP_05417833.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262156096|ref|ZP_06029215.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262169962|ref|ZP_06037652.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262191216|ref|ZP_06049415.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|121547885|gb|EAX57969.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121629320|gb|EAX61752.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|124114015|gb|EAY32835.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|124122450|gb|EAY41193.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|125620933|gb|EAZ49284.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|126510775|gb|EAZ73369.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|126520177|gb|EAZ77400.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|146315709|gb|ABQ20248.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|148875355|gb|EDL73490.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|149739689|gb|EDM53896.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|227008732|gb|ACP04944.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|227012488|gb|ACP08698.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|229332243|gb|EEN97731.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229342187|gb|EEO07183.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229344229|gb|EEO09204.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229350173|gb|EEO15126.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229354235|gb|EEO19165.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229357938|gb|EEO22855.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229371389|gb|ACQ61812.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|255738508|gb|EET93897.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262021696|gb|EEY40407.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262030132|gb|EEY48777.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262032918|gb|EEY51457.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|327483462|gb|AEA77869.1| Peptide chain release factor 2 [Vibrio cholerae LMA3894-4]
          Length = 299

 Score =  341 bits (875), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 167/289 (57%), Positives = 216/289 (74%), Gaps = 2/289 (0%)

Query: 64  DRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           DR  D++  LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+D YL++ 
Sbjct: 8   DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQ 67

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+
Sbjct: 68  AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 127

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH
Sbjct: 128 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 187

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +
Sbjct: 188 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 247

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 248 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 295


>gi|259909551|ref|YP_002649907.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
 gi|224965173|emb|CAX56705.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
          Length = 293

 Score =  341 bits (875), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 210/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E +D     E  + L  +  ++   +F  + SGE DS D Y+++ AG+GGTE+Q
Sbjct: 11  LLELAVEAEDEETFNEAVNELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E +K++IGWG Q
Sbjct: 191 ITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289


>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
 gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
          Length = 377

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 164/347 (47%), Positives = 240/347 (69%), Gaps = 2/347 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +++ LG     D A   +  L  K      W ++  ++ ++++ + L + I+  + ++ +
Sbjct: 20  EIDDLGRALGLDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQLKDKIASYEALRRK 79

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D L L+ELA EE+D S+L E ++ +  ++ +++  +  +LL+GE D+ +A L  HAGA
Sbjct: 80  TDDTLALIELADEEEDLSVLAEAAEAVDSVRAQIDTMRLATLLTGEYDAKNAILTFHAGA 139

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA ML RMYTRWAE+  F  + L+  DGEEAG+KSA++LI+G NAYG+LK E 
Sbjct: 140 GGTEAQDWAEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASVLIEGLNAYGYLKSEI 199

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SP+DS+ RRHTSF+S+ V P +DDSIE++I   D ++D +R+SGAGGQH+N 
Sbjct: 200 GVHRLVRVSPFDSSGRRHTSFASVEVMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQHINK 259

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKT 304
           T SAVR+TH+PTG+VV CQ ERSQH+N+  A  ML++KL E+ E +  ++I +I +  + 
Sbjct: 260 TSSAVRLTHLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKEREHYDKIEDI-KGVQK 318

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           EI WG QIRSYV  PY +VKD RT+ E  +   V+DGDLD F+ A L
Sbjct: 319 EIAWGSQIRSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINAYL 365


>gi|311087834|gb|ADP67913.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 161/345 (46%), Positives = 239/345 (69%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + +
Sbjct: 4   ILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKE 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GGT
Sbjct: 64  VVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDYYDCYIDIQSGSGGT 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+H
Sbjct: 124 DAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+S
Sbjct: 184 RLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTES 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I W
Sbjct: 244 AVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITW 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSY+L   + +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 304 GNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift [Anaplasma
           phagocytophilum HZ]
 gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ]
          Length = 376

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 166/330 (50%), Positives = 227/330 (68%), Gaps = 1/330 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  L+ +   P LW +  +AK L+ ER  +   ++  + ++    D   L E+  + DD 
Sbjct: 34  LESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDR 93

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
             L   +  LQ +KL +  K+ E + S EAD+N  +L + +GAGGTES DW  MLLRMYT
Sbjct: 94  DFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYT 153

Query: 143 RWAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           +WAE   +F  E ++  DGEE G+K+ T+ I G  AYGW + E G+HRLVRISP+D  ++
Sbjct: 154 KWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAK 213

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ V PVVD  I+I+I E D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VV
Sbjct: 214 RHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGMVV 273

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ  RSQH+N+A+A+++L+++LYE+ELQ++E+       +K EIGWG QIRSYV+ PY+
Sbjct: 274 QCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDHQNKCEIGWGHQIRSYVMHPYR 333

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKDLRT  E  +   V++GDLD F+ A L
Sbjct: 334 MVKDLRTGHETGNVDAVMNGDLDAFITAAL 363


>gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
 gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
 gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
 gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
 gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
 gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
 gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
 gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
 gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
 gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
 gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
 gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62]
 gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
          Length = 327

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 217/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|304311879|ref|YP_003811477.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
 gi|301797612|emb|CBL45833.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
          Length = 300

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 164/296 (55%), Positives = 219/296 (73%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  +  RL     LL++ +EE+D S+L +    +  I+ +V   +F  + SGE D+N
Sbjct: 2   VGTIDSVSTRLRGARELLDMVVEENDESMLGDVQKEIDGIEADVAKMEFRRMFSGETDAN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             YL++ AG+GGTE+QDWA+MLLRMY RW E   FKTE +E+  GE AGIKSAT+ ++G 
Sbjct: 62  SCYLDIQAGSGGTEAQDWADMLLRMYLRWGEDHGFKTELVEVSAGEVAGIKSATIHLEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I IEI+ +D ++DTYRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIHIEINPADLKVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SA+RITH+P+G+VVQCQ +RSQHKN+ QA   LR+KLYE+E+QKR   
Sbjct: 182 SGAGGQHVNRTESAIRITHVPSGIVVQCQSDRSQHKNRDQAMKQLRSKLYEMEMQKRYVE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               E SK +IGWG QIRSYVL   + VKDLRTN+E ++   VLDG++D F+KA+L
Sbjct: 242 KMRQEDSKMDIGWGSQIRSYVLDQSR-VKDLRTNVETSNTEAVLDGEIDLFIKASL 296


>gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 368

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 175/348 (50%), Positives = 233/348 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +N L    D D    +L  LN K  +   W +   A+  ++E  H +  I  +K + D +
Sbjct: 19  VNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKSLTDEI 78

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                LLE+   E D S  ++  D+L +++   E  +  +LL+ + D ND  L++HAGAG
Sbjct: 79  SSLKDLLEIMEMEGDYSSYKDFKDDLIKLEKHAEDFKIATLLNDKYDDNDVILQIHAGAG 138

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+MLLRMYTR+ E++ F  E L++   +EAGIKSATLLIKG + YG+LKGE+G
Sbjct: 139 GTEAQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGIKSATLLIKGDSCYGYLKGEKG 198

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN RRHTSFSS+ VYP ++D  +++I   D +IDTYR+SGAGGQHVNTT
Sbjct: 199 VHRLVRISPFDSNKRRHTSFSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQHVNTT 258

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTGVVVQCQ ERSQ +N+  A  +L+AKL  L  ++++E       + ++I
Sbjct: 259 DSAVRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSGNYSQI 318

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSYV QPY MVKD RTN E      V+DG+LD F+ A L  K
Sbjct: 319 AWGSQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLDPFINAYLQSK 366


>gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
 gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
          Length = 366

 Score =  341 bits (875), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 217/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 42  EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 101

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 102 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 161

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 162 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 221

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 222 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 281

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 282 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 341

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 342 TGNVQAVMDGDLDGFIDAYL 361


>gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 329

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 171/317 (53%), Positives = 225/317 (70%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L  
Sbjct: 1   MWNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDN 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE 
Sbjct: 61  YQAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P 
Sbjct: 121 MEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+ 
Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL   + +KDLRT IE++ 
Sbjct: 241 NAMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD+F++A+L
Sbjct: 300 TQKVLDGDLDEFVEASL 316


>gi|219682342|ref|YP_002468726.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622075|gb|ACL30231.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 161/345 (46%), Positives = 239/345 (69%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + +
Sbjct: 4   ILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKE 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GGT
Sbjct: 64  VVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKDDHYDCYIDIQSGSGGT 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+H
Sbjct: 124 DAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+S
Sbjct: 184 RLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTES 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I W
Sbjct: 244 AVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITW 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSY+L   + +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 304 GNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|315634626|ref|ZP_07889910.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
 gi|315476574|gb|EFU67322.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
          Length = 325

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 173/321 (53%), Positives = 231/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P +W +  +A+ L +ER  L+  ++ IK ++  L D   LLELA+E  D     E   
Sbjct: 2   EQPDVWNDADKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAVA 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + F
Sbjct: 62  ELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +
Sbjct: 122 KTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQH
Sbjct: 182 VYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK QA   L+AKLYELELQK+       E +K++IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDGDLD F++A+L
Sbjct: 301 ENRNTQAVLDGDLDRFIEASL 321


>gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
 gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
          Length = 327

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 217/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|108562592|ref|YP_626908.1| peptide chain release factor 2 [Helicobacter pylori HPAG1]
 gi|122386784|sp|Q1CUY8|RF2_HELPH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|107836365|gb|ABF84234.1| peptide chain release factor RF-2 [Helicobacter pylori HPAG1]
          Length = 363

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 179/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPTLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
 gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
          Length = 327

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 217/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|317010450|gb|ADU84197.1| peptide chain release factor 2 [Helicobacter pylori SouthAfrica7]
          Length = 363

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 176/334 (52%), Positives = 238/334 (71%), Gaps = 2/334 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ +D L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELAQNDN 90

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D   L    +    ++  V+  + E +LSGE D+++A + +  GAGGTESQDWA++L RM
Sbjct: 91  DEVTLSLLYEEALVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQDWASILYRM 150

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D+N+
Sbjct: 151 YLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFDANA 210

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PTG+V
Sbjct: 211 KRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIV 270

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL PY
Sbjct: 271 VQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVLAPY 328

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           Q VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 329 QQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|210134369|ref|YP_002300808.1| peptide chain release factor 2 [Helicobacter pylori P12]
 gi|238054483|sp|B6JPR7|RF2_HELP2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|210132337|gb|ACJ07328.1| peptide chain release factor RF-2 [Helicobacter pylori P12]
          Length = 363

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ +D L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPTLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++   +     K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQN--STKNEEKSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|332307386|ref|YP_004435237.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174715|gb|AEE23969.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 365

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 183/343 (53%), Positives = 237/343 (69%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L G  D+D   +RL  +N + E P +W     A+ L +E+  L+  +  I  ++    D
Sbjct: 20  SLRGYLDYDQKSERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGCVD 79

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+EE D     E   +L  +  ++E  +F  + SG  D+ND Y+++ +G+GGT
Sbjct: 80  VEELLELAVEESDQDTFDEAEKDLAELVAKLETLEFRRMFSGPNDANDGYIDIQSGSGGT 139

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA+MLLRMY RW E   FKTE +E+ DG+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 140 EAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETGVH 199

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS SRRHTSF+S++ YP +DD IEI+I  SD RIDTYRASGAGGQHVN TDS
Sbjct: 200 RLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRTDS 259

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH PT +VVQCQ +RSQHKNKAQA   L+AKLYE E+QK+ E     E SK++IGW
Sbjct: 260 AVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQNMEDSKSDIGW 319

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 320 GSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIQASL 361


>gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
 gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
          Length = 349

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/345 (49%), Positives = 245/345 (71%), Gaps = 3/345 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   +++       E    W++   A  +++E + L   +   +++Q  L D  +L
Sbjct: 3   LFDIERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVL 62

Query: 73  LELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +EL LEEDD   I +E SD++ ++K  ++    ++LLSGE D N+A + ++AG GG ++Q
Sbjct: 63  IELGLEEDDSEDIEKEVSDSINQLKDVIDEMTIQTLLSGEYDKNNAIVSINAGTGGLDAQ 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RWAE R +K + L++    EAGIK+A +LI+G NAYG+LKGE+GVHR+V
Sbjct: 123 DWAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIV 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D + +RHTSF+S+ V P +D++IE+EI++SD +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 183 RISPFDPSGKRHTSFASVDVIPELDENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+ VQCQ ERSQH N+  A  ML AKL ++ E++++E+I ++ +   T+I WG 
Sbjct: 243 ITHLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDL-QGKYTQITWGS 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYV QPY+MVKD RTN E  +   V++G++D F+ + L  KK
Sbjct: 302 QIRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLTRKK 346


>gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
 gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
          Length = 367

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 166/338 (49%), Positives = 235/338 (69%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D    RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 27  LDYDGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKVLEGIVLTLDNIAGGIDDNRLLI 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++ALEE D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 87  DMALEEGDEDSFAAIEEDVAELEKQMAELEFKRMFNQPADVNNCFIDITAGAGGTEAEDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY R+ E++ FK E +E  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLLRMYVRYGERKGFKVEIMEQDDGEIAGINRATIRLEGEYAYGLLRTETGVHRLVRH 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DT+RASGAGGQH+N TDSAVR+T
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAGGQHINKTDSAVRMT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQ Q  RSQH N+     MLRAKL+ELE++KR E     E  K+++GWG QIR
Sbjct: 267 HIPTGIVVQSQNSRSQHDNRRVCEEMLRAKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT+ E  +   VLDGDLDDF++A+L
Sbjct: 327 SYVLDSSR-IKDLRTSHETGNTKAVLDGDLDDFIEASL 363


>gi|119470492|ref|ZP_01613195.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
 gi|119446193|gb|EAW27470.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
          Length = 283

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 163/280 (58%), Positives = 209/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E +  L+ +  ++E  +F  + SG  D+NDAYL++ +G+GGTE+Q
Sbjct: 1   MLELAIEAEDKDTFDEANAELEGLNEQLESLEFRRMFSGTHDANDAYLDLQSGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW NMLLRMY RW E + FK E +E  DG+ AGIK AT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWCNMLLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFVGEYAYGWLRTETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ SD RID YRASGAGGQHVNTT+SAVR
Sbjct: 121 RKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPSDLRIDVYRASGAGGQHVNTTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++       E +K++IGWG Q
Sbjct: 181 ITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDAKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG+LD F++A+L
Sbjct: 241 IRSYVLDDSR-IKDLRTGVENRNTQSVLDGNLDKFIEASL 279


>gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
 gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
          Length = 327

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/324 (53%), Positives = 230/324 (70%), Gaps = 4/324 (1%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91
           P+ W +   A+ ++ E   L + +     +++R  DNL +  EL  EE D  +  E  + 
Sbjct: 4   PNFWDDQKSAQAVISEANALKDLVEEFSSLEERF-DNLEVTYELLKEEPDDELQAELVEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ FK
Sbjct: 63  AKKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S  V
Sbjct: 123 VETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ K
Sbjct: 183 VPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+ +A NML+AKLY+ +L++++ E+A +    + EIGWG QIRSYV  PY +VKD RTN+
Sbjct: 243 NREKAMNMLKAKLYQKKLEEQQAELAEL-RGEQKEIGWGNQIRSYVFHPYSLVKDHRTNV 301

Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354
           E  +   V+DG++D F+ A L  K
Sbjct: 302 EVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|188534903|ref|YP_001908700.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
 gi|188029945|emb|CAO97829.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
          Length = 300

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 209/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E +D     E    L  +  ++   +F  + SGE DS D Y+++ AG+GGTE+Q
Sbjct: 18  LLELAVEAEDEETFNEAVAELDGLDKKLAELEFRRMFSGEYDSADCYMDIQAGSGGTEAQ 77

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 78  DWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLV 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 138 RKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 197

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E +K++IGWG Q
Sbjct: 198 ITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQ 257

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 258 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 296


>gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
 gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
          Length = 327

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 217/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|15611227|ref|NP_222878.1| peptide chain release factor 2 [Helicobacter pylori J99]
 gi|7388058|sp|Q9ZMR1|RF2_HELPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4154673|gb|AAD05740.1| PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2) [Helicobacter pylori J99]
          Length = 363

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 241/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   +++++ L +++ L ELA  + 
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKMKNSLDESVELFELAQNDS 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPTLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE++ FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|317181479|dbj|BAJ59263.1| peptide chain release factor 2 [Helicobacter pylori F57]
          Length = 381

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 179/337 (53%), Positives = 240/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+ HL+  +   ++ ++ L ++  L ELA  ++
Sbjct: 49  QELERIEKEQEDPNFWQDVLKARDTNKEKVHLNRLLETYQKTKNSLDESTELFELAQNDN 108

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 109 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 165

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 166 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 225

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 226 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 285

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 286 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNTAKNEE--KSEIGWGHQIRSYVL 343

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 344 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|315127590|ref|YP_004069593.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
 gi|315016104|gb|ADT69442.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
          Length = 300

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 168/292 (57%), Positives = 211/292 (72%), Gaps = 9/292 (3%)

Query: 68  DNLI--------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           DNL+        L+ELA+E +D     E    L  +  ++E  +F  + SG  DSNDAYL
Sbjct: 6   DNLVAGTDDVEGLVELAVEAEDQDTFDEAQSELADLNQQLEGLEFRRMFSGSHDSNDAYL 65

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           ++ +G+GGTE+QDW N+LLRMY RW E + FK E +E  DG+ AGIK AT+   G  AYG
Sbjct: 66  DLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFSGEYAYG 125

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           WL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+I+ SD RID YRASGAG
Sbjct: 126 WLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDINPSDLRIDVYRASGAG 185

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++       
Sbjct: 186 GQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQSQ 245

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 246 EDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 296


>gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis AR01/DG]
 gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
          Length = 327

 Score =  340 bits (873), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 217/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 375

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/330 (52%), Positives = 223/330 (67%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L  K  DP LW +  +AK + ++R  L   +     ++  L D   L+EL  EE  
Sbjct: 34  RLLSLIEKANDPKLWDSPDQAKNVTQKRNELQMKLDPWLGLKKELLDFPDLIELTSEEMG 93

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            S L+  +D+  R+    E  Q    LSG+ D   A++ +H GAGGTESQDWA+MLLRMY
Sbjct: 94  ESGLKSLNDDFDRMFESFENLQMLDALSGKDDGKAAFINIHPGAGGTESQDWADMLLRMY 153

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+AE++ ++ E ++   GE AGIK+ATL I+G + +G+LK E GVHRLVRISP+DSN R
Sbjct: 154 TRFAEQKGYRAELVDYQPGETAGIKNATLYIQGDHPFGYLKCESGVHRLVRISPFDSNKR 213

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S++V P VDD I++ I E D R+D YR+SGAGGQHVNTTDSAVRITHIPTGVVV
Sbjct: 214 RHTSFASVYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGVVV 273

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+  A  ML+A+LYE+E QK EE        K +I WG QIRSYV  PY 
Sbjct: 274 SCQMERSQIKNRDTAMKMLKARLYEMEKQKAEEENAKKAGEKRDIAWGSQIRSYVFHPYN 333

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +VKD RT+ E  +   V+DGDL+DF+ A L
Sbjct: 334 LVKDHRTDFETGNVHAVMDGDLEDFIIAYL 363


>gi|157373979|ref|YP_001472579.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
 gi|157316353|gb|ABV35451.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
          Length = 352

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 173/341 (50%), Positives = 233/341 (68%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +  + E   +W N   A+ L +ER  L+  +  I ++   L D  
Sbjct: 9   GGIFDYDAKKERLEEVCAELESAEVWSNPENAQALGKERSSLEVIVKTIDDMDSGLEDVQ 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+ELA+EEDD     + S  L  ++  +E  +F  + SG  D  D YL++ +G+GGTE+
Sbjct: 69  DLVELAVEEDDEETFDDASTELDGLEKRLEELEFRRMFSGPHDVADCYLDIQSGSGGTEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANM+LRM+ RW +   +K E +E+ DG+ AGIK AT+   G  A+G L+ E GVHRL
Sbjct: 129 QDWANMVLRMFLRWGDAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+
Sbjct: 189 VRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E SK++IGWG 
Sbjct: 249 RITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDSKSDIGWGS 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 309 QIRSYVLDDAR-IKDLRTGVESRNTQSVLDGDLDKFIEASL 348


>gi|167032113|ref|YP_001667344.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
 gi|166858601|gb|ABY97008.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
          Length = 304

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/300 (55%), Positives = 221/300 (73%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D + + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDENAVGDVVAELEELEENLAKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL   + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 300


>gi|160876721|ref|YP_001556037.1| peptide chain release factor 2 [Shewanella baltica OS195]
 gi|160862243|gb|ABX50777.1| peptide chain release factor 2 [Shewanella baltica OS195]
          Length = 352

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/342 (50%), Positives = 234/342 (68%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 308 SQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 348


>gi|213969083|ref|ZP_03397222.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
 gi|213926081|gb|EEB59637.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
          Length = 280

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE+QDWA
Sbjct: 1   MSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           N+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR S
Sbjct: 61  NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++IGWG QIRS
Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 241 YVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 276


>gi|310766541|gb|ADP11491.1| peptide chain release factor 2 [Erwinia sp. Ejp617]
          Length = 300

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 209/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E +D     E    L  +  ++   +F  + SGE DS D Y+++ AG+GGTE+Q
Sbjct: 18  LLELAVEAEDEETFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQ 77

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 78  DWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLV 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 138 RKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 197

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E +K++IGWG Q
Sbjct: 198 ITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQ 257

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 258 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 296


>gi|229525316|ref|ZP_04414721.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
 gi|229338897|gb|EEO03914.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
          Length = 299

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/289 (57%), Positives = 214/289 (74%), Gaps = 2/289 (0%)

Query: 64  DRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           DR  D++  LLELA+E +D     E    L  +   +E  +F  + SG+ DS+D YL++ 
Sbjct: 8   DRGVDDVEGLLELAIEAEDQETFDEIGPELDELGARLEQLEFRRMFSGDHDSSDCYLDLQ 67

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+
Sbjct: 68  AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 127

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH
Sbjct: 128 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 187

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +
Sbjct: 188 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 247

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 248 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 295


>gi|226945982|ref|YP_002801055.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
 gi|226720909|gb|ACO80080.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
          Length = 280

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 162/277 (58%), Positives = 214/277 (77%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+EE+D     + +  ++R++  +E  +F  + SGE D+ +AYL+V AG+GGTE+QDWA
Sbjct: 1   MAVEENDEGAANDVAAEVERLRGILEKLEFRRMFSGEMDARNAYLDVQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           NMLLRMY RWA+K  F TE +E+ +GE AGIKSAT+ ++G  A+GWL+ E GVHRLVR S
Sbjct: 61  NMLLRMYLRWADKHGFDTEIVELSEGEVAGIKSATVHVRGEYAFGWLRTEIGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFS+++  P VDD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFSAVFASPEVDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT  VV CQ ERSQH N+ +A  MLRAKLYELE+ KR   A   E +K++IGWG QIRS
Sbjct: 181 LPTNTVVSCQNERSQHANRDRAMKMLRAKLYELEVMKRNVAAQALEDTKSDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRT IE ++   VLDGDLD+F++A+L
Sbjct: 241 YVLDQSR-IKDLRTGIENSNCDAVLDGDLDEFIEASL 276


>gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
 gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
          Length = 293

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 160/286 (55%), Positives = 214/286 (74%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   LL++A+EEDD   ++  +  L+ ++ ++   +F  + S E D  +A+L++ AG+
Sbjct: 5   LVDAKELLDMAVEEDDEDSVEAVTMELEELEAQLSKLEFRRMFSQEMDPTNAFLDIQAGS 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWANMLLRMY RW E + FK E +E+  G+ AGIKSAT+  +G  A+GWL+ E 
Sbjct: 65  GGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSAGDVAGIKSATIRFEGEYAFGWLRTET 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS SRRHTSF+S+++ P +DD++EI+I+ +D R DTYR+SGAGGQHVNT
Sbjct: 125 GVHRLVRKSPFDSGSRRHTSFASVFLSPEIDDNVEIDINPADLRTDTYRSSGAGGQHVNT 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIPTG+VVQCQ +RSQH N+  A   LRAKLYE E+QKR E A   E +K++
Sbjct: 185 TDSAVRITHIPTGIVVQCQNQRSQHANRDFAMKQLRAKLYEFEMQKRTEAAQAVEDTKSD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYVL   + +KDLRT +E ++   VLDG+LD F+ A+L
Sbjct: 245 IGWGSQIRSYVLDSSR-IKDLRTGVESSNTGAVLDGNLDQFIVASL 289


>gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
 gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
          Length = 310

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 163/305 (53%), Positives = 217/305 (71%), Gaps = 1/305 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           RER  L+  +  I++++    D   LLE+A  EDD   L E    +  +  ++E  +F  
Sbjct: 3   RERSSLETIVLTIEKLEGGATDAADLLEMAAAEDDQDTLTEVISEIDALVAQLERLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +  GE D+N+A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT+ +E   G+ AGIK
Sbjct: 63  MFDGEMDANNAFLDIQSGSGGTEAQDWAEMMLRMYLRWGEAKGFKTQLMEASAGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+IEIEI+ +
Sbjct: 123 SATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIEIEINPA 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQHVN TDSAVR+TH PTG+ VQCQ ERSQH+N+  A  +LRAKLYE
Sbjct: 183 DLRVDTYRASGAGGQHVNKTDSAVRLTHNPTGIAVQCQTERSQHQNRDNAMKLLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ KR E     E  K +IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F
Sbjct: 243 MEMLKRNEEKQAMEDGKADIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGSLDQF 301

Query: 347 MKATL 351
           ++A+L
Sbjct: 302 IEASL 306


>gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
 gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
          Length = 329

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 170/317 (53%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L +
Sbjct: 1   MWNDSERAQALGRERSMLEKTVIGIADVLAGLADAADLLELAESEQDEDTAVAVLADLDK 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            ++ VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE 
Sbjct: 61  YQVHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  GE AGIKSAT+ I+G   YGWLK E GVHRLVR SP+DS++RRHTSF+S++V P 
Sbjct: 121 MEVSGGEVAGIKSATIRIEGEFVYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+ 
Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL   + +KDLRT IE++ 
Sbjct: 241 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD+F++A+L
Sbjct: 300 TQKVLDGDLDEFVEASL 316


>gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
 gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
          Length = 357

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 169/343 (49%), Positives = 235/343 (68%), Gaps = 2/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++  +  D +
Sbjct: 4   GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HAGAGGTE+
Sbjct: 64  TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK E+GVHRL
Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+N T+SAV
Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL E + +E+I ++ +  + EI WG
Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDL-KGIQLEIAWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 303 SQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
 gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
          Length = 367

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 172/338 (50%), Positives = 233/338 (68%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +RL  +N   EDP++W +  +A+ L +E++ LD  +  ++++   L DN  L 
Sbjct: 27  LDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKLTAELADNAELY 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E++ EE D + L        ++   +E  +F  + S EAD  + Y+++ AGAGGTE+ DW
Sbjct: 87  EMSREEGDEAGLLAIEGEAAKLLPLIEELEFRRMFSKEADPLNCYIDIQAGAGGTEACDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLRTETGVHRLVRK 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+  RHTSF+S++VYP VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+T
Sbjct: 207 SPFDSSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +KT++GWG QIR
Sbjct: 267 HIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 327 SYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363


>gi|86147405|ref|ZP_01065718.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218708550|ref|YP_002416171.1| peptide chain release factor 2 [Vibrio splendidus LGP32]
 gi|85834833|gb|EAQ52978.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218321569|emb|CAV17521.1| Peptide chain release factor 2 [Vibrio splendidus LGP32]
          Length = 303

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 160/280 (57%), Positives = 211/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EE+D     E    L  ++ ++E  +F  + SG+ D++D Y+++ +G+GGTE+Q
Sbjct: 21  LLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQ 80

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I G  AYGWL+ E GVHRLV
Sbjct: 81  DWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRISGEYAYGWLRTETGVHRLV 140

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SAVR
Sbjct: 141 RKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVR 200

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELE+QK+       E +K++IGWG Q
Sbjct: 201 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQASEETKSDIGWGSQ 260

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 261 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 299


>gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
 gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
          Length = 327

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 217/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + + +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
           27405]
 gi|125713111|gb|ABN51603.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium
           thermocellum ATCC 27405]
          Length = 357

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 169/343 (49%), Positives = 235/343 (68%), Gaps = 2/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++  +  D +
Sbjct: 4   GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HAGAGGTE+
Sbjct: 64  TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK E+GVHRL
Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+N T+SAV
Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL E + +E+I ++ +  + EI WG
Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDL-KGIQLEIAWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 303 SQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 417

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/338 (49%), Positives = 234/338 (69%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 77  MDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKLLEGVVLTLDNIGGGIEDNRMLI 136

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+A+EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 137 EMAVEENDEDGFAAIESDVAELESQMAGLEFKRMFNQPADHNNCFVDITAGAGGTEAEDW 196

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E +E  DGE AGI  ATL ++G  AYG L+ E GVHRLVR 
Sbjct: 197 AGMLFRMYSRYAERKGFKLEIIEEDDGEIAGINRATLRVEGEYAYGLLRTETGVHRLVRY 256

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH+N TDSAVRIT
Sbjct: 257 SPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRIT 316

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQ Q  RSQH+N+     MLR+KL+ELE++KR E     E  K ++GWG QIR
Sbjct: 317 HIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEGKADVGWGSQIR 376

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 377 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 413


>gi|308182345|ref|YP_003926472.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
 gi|308064530|gb|ADO06422.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
          Length = 363

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 179/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESIELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|109946962|ref|YP_664190.1| peptide chain release factor 2 [Helicobacter acinonychis str.
           Sheeba]
 gi|123066315|sp|Q17YT5|RF2_HELAH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109714183|emb|CAJ99191.1| peptide chain release factor RF-2 [Helicobacter acinonychis str.
           Sheeba]
          Length = 363

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 242/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q+L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L E+A  ++
Sbjct: 31  QKLERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNALDESVELFEIAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHGVQKVE---IEIMLSGEHDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|34496516|ref|NP_900731.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
 gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
          Length = 299

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 161/274 (58%), Positives = 211/274 (77%), Gaps = 2/274 (0%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EEDD +IL   +D L+ ++ +V   +F  +     D  + ++++ AGAGGTE+QDWA ML
Sbjct: 24  EEDDDTILAVQAD-LEEVEAKVAQLEFRRMFHDPMDPTNCFIDIQAGAGGTEAQDWAGML 82

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMYTR+AE++ FK + LE+ +GE AG+ SATL I+G  AYG L+ E GVHRLVR+SP+D
Sbjct: 83  LRMYTRYAERKGFKVDVLELSEGEVAGVTSATLKIEGEYAYGLLRTEVGVHRLVRVSPFD 142

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           SN+RRHTSFSS++VYP VDDS EI+I+ +D R DTYRASGAGGQH+N TDSAVR+THIPT
Sbjct: 143 SNARRHTSFSSVFVYPEVDDSFEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 202

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQH+N+ +AW MLRAKLYELEL+KR E     E +KT++GWG QIRSYV 
Sbjct: 203 GIVVQCQNDRSQHRNRDEAWQMLRAKLYELELKKRNEAKQALEDTKTDVGWGHQIRSYVF 262

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + +KDLRT+ E  +   V+DGDLD F++A+L
Sbjct: 263 DQSR-IKDLRTSYEVGNIKGVMDGDLDGFIEASL 295


>gi|307636860|gb|ADN79310.1| hypothetical protein hp908_0179 [Helicobacter pylori 908]
 gi|325995449|gb|ADZ50854.1| Peptide chain release factor 2 [Helicobacter pylori 2018]
 gi|325997047|gb|ADZ49255.1| Peptide chain release factor 2 [Helicobacter pylori 2017]
          Length = 363

 Score =  340 bits (871), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 179/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|117921735|ref|YP_870927.1| peptide chain release factor 2 [Shewanella sp. ANA-3]
 gi|117614067|gb|ABK49521.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           ANA-3]
          Length = 352

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 173/342 (50%), Positives = 235/342 (68%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG+ D++D YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 308 SQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 348


>gi|119947032|ref|YP_944712.1| peptide chain release factor 2 [Psychromonas ingrahamii 37]
 gi|119865636|gb|ABM05113.1| bacterial peptide chain release factor 2 (bRF-2) [Psychromonas
           ingrahamii 37]
          Length = 329

 Score =  339 bits (870), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/321 (51%), Positives = 222/321 (69%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P +W     A+ L +ER  L+  +  I  +     D L+L+E+A EE+D     E   
Sbjct: 6   ESPEVWSEPERAQALGKERSALELVVDTIDALSAGTEDILMLVEMATEENDQDSFDEAQK 65

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +  ++ ++E  +F  + SG  D+   YL++ +G+GGTE+QDWAN+LLRMY RW E   +
Sbjct: 66  EVNELEKKLEVLEFRRMFSGNHDACSCYLDIQSGSGGTEAQDWANILLRMYLRWGEAHGY 125

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE +E+  G+ AGIK AT+   G  A+GWL+ E GVHRLVR SP+DS+ RRHTSF+S +
Sbjct: 126 KTELMEVSAGDVAGIKGATIRFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASAF 185

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +YP ++D I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQH
Sbjct: 186 IYPEIEDDIDIQINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQH 245

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK QA   L+AKLYE ELQK+     I E SK++IGWG QIRSYVL   + +KDLRT I
Sbjct: 246 KNKDQAMKQLKAKLYEHELQKQNAEKQISEDSKSDIGWGSQIRSYVLDDAR-IKDLRTGI 304

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDG LD F++A+L
Sbjct: 305 ESRNTQAVLDGGLDKFIEASL 325


>gi|226953405|ref|ZP_03823869.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|294651888|ref|ZP_06729178.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226835836|gb|EEH68219.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|292822211|gb|EFF81124.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 297

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 163/292 (55%), Positives = 212/292 (72%), Gaps = 5/292 (1%)

Query: 64  DRLCDNL----ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           DRL + L     +L+LA+E DD S+L +    L   +  +   +F  + S   D N  +L
Sbjct: 3   DRLAEQLDDAKAMLDLAVEADDESLLLDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFL 62

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ + G  AYG
Sbjct: 63  EIQSGSGGTEAQDWASMLLRMYLRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYG 122

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           WL+ E GVHRLVR SP+DSN+ RHTSFS++++ P +DD+IEI+I+ SD R DTYRASGAG
Sbjct: 123 WLRTESGVHRLVRKSPFDSNNNRHTSFSAVFISPEIDDNIEIDINPSDVRTDTYRASGAG 182

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   
Sbjct: 183 GQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQAL 242

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 243 EDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTKAVLDGDLDKFIEASL 293


>gi|294142345|ref|YP_003558323.1| peptide chain release factor 2 [Shewanella violacea DSS12]
 gi|293328814|dbj|BAJ03545.1| peptide chain release factor 2 [Shewanella violacea DSS12]
          Length = 352

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 234/345 (67%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG FD+D   +RL  ++ + E+  +W +   A+ L +ER  L+  +  I ++   L
Sbjct: 5   LLAFGGFFDYDAKKERLEEVSRELENSDVWNDPDNAQALGKERAALELIVKTIDDMDTGL 64

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LL+LA+EE D     + S  L  ++  +E  +F  + SG  D  ++YL++ +G+G
Sbjct: 65  EDVEGLLDLAIEEGDEDTFNDASAELDDLEKRLEDLEFRRMFSGPHDIANSYLDIQSGSG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWANM+LRMY RW E   +K E +E+  G+ AGIK AT+   G  A+G L+ E G
Sbjct: 125 GTEAQDWANMVLRMYLRWGEAHDYKPELIEVTAGDVAGIKGATIKFNGEYAFGSLRTETG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH+N T
Sbjct: 185 VHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHINKT 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKL+ELE+ K+ +     E +K++I
Sbjct: 245 ESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLFELEMLKQNQEKQAAEDAKSDI 304

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 305 GWGSQIRSYVLDDAR-IKDLRTGVESRNTQTVLDGGLDMFIQASL 348


>gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 329

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 170/317 (53%), Positives = 226/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W +   A+ L RER  L+  +  I ++   L D   LL+LA  E D         +L +
Sbjct: 1   MWNDAERAQALGRERSMLEKTVIGIADVLAGLTDAGELLDLADSEQDEDTAVAVIADLDK 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE 
Sbjct: 61  YQAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P 
Sbjct: 121 MEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+ 
Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL   + +KDLRT IE++ 
Sbjct: 241 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD+F++A+L
Sbjct: 300 TQKVLDGDLDEFVEASL 316


>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
 gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
           aciditrophicus SB]
          Length = 279

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 209/277 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE+D   L+  S++++ ++  V   + + +L  E D  +A + +HAGAGGTE+QDW 
Sbjct: 1   MAKEENDEEALEAISNDIESLRKSVRESELKMMLGSEQDPMNAIVSIHAGAGGTEAQDWV 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RWAEKR FKT  ++   G+EAG+KS +  I+G  AYG+ K E G+HRLVRIS
Sbjct: 61  EMLLRMYLRWAEKRGFKTTIIDYLPGDEAGVKSVSFTIEGEYAYGYAKAEIGIHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D++SRRHTSF+S++VYP V+D I +EI E D RIDTYR++GAGGQHVN TDSAVRITH
Sbjct: 121 PFDASSRRHTSFASVFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PTG+VVQCQ ERSQHKNKA A   LR++LYEL++Q++ E  +    +K +I WG QIRS
Sbjct: 181 MPTGIVVQCQNERSQHKNKAMAMKYLRSRLYELKIQEQNEKLSEINKTKKDIAWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVLQPY+MVKD RTNIE  +   VLDGD+DD ++A L
Sbjct: 241 YVLQPYKMVKDHRTNIEIGNVGRVLDGDIDDLIEAYL 277


>gi|333000723|gb|EGK20298.1| peptide chain release factor 2 [Shigella flexneri K-272]
 gi|333015221|gb|EGK34563.1| peptide chain release factor 2 [Shigella flexneri K-227]
          Length = 293

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELNALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum 70/3]
          Length = 370

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 233/348 (66%), Gaps = 4/348 (1%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L  L G  D DN    ++ L  ++  P  W +V  ++ + ++     N +   +++++ 
Sbjct: 17  ELKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRES 76

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D + +LELA EEDD S+L E  +  +  + E+E ++  +LLSGE D N+A L  HAGA
Sbjct: 77  YDDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGA 136

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW  ML RMY  WAE+   K   L+  DGEEAGIKSA++L++G NAYG+LK E 
Sbjct: 137 GGTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSEN 196

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN 
Sbjct: 197 GVHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNK 256

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSK 303
           T SAVRITHIPTG+V  CQ ERSQH+N+  A  ML++KL  LE+++RE +  I +    +
Sbjct: 257 TSSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKL--LEIKEREHLDKISDIKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +I WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L
Sbjct: 315 LQIAWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYL 362


>gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
 gi|189040002|sp|A9BHH8|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
          Length = 366

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 175/352 (49%), Positives = 240/352 (68%), Gaps = 6/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L  +F+ D   + +  L+ +  +P+ W +   AK + +  Q+L + I   K+
Sbjct: 12  ELKENFEDLKDVFNIDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++   +  I +EL+  EDD S+  +    L+ I+ ++   +   LLS E D  +A+L +
Sbjct: 72  LENDFEELEIAVELS--EDDPSMTAQVEAILKVIEKKIGSFRLRMLLSEEYDDANAFLSL 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWA+K  +  E ++  +G+EAGIKSAT+ I GP AYG L
Sbjct: 130 HPGAGGTESQDWASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+SI V P  D+++EIEI+  D +IDTYR+ GAGGQ
Sbjct: 190 KYESGVHRLVRISPFDANGRRHTSFASISVMPEFDENVEIEINPDDLKIDTYRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIG 299
           HVN TDSAVRITH+PTG+VV  Q ERSQH+NKA A  +L+AKLYELE QK+  E++   G
Sbjct: 250 HVNKTDSAVRITHLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRG 309

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E    +I WG QIRSYVL PY +VKDLRT  E ++   VLDG++D+F++  L
Sbjct: 310 EVK--DISWGNQIRSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIEEEL 359


>gi|84393962|ref|ZP_00992702.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
 gi|84375406|gb|EAP92313.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
          Length = 303

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 211/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EE+D     E    L  ++ ++E  +F  + +G+ D++D Y+++ +G+GGTE+Q
Sbjct: 21  LLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFAGDHDASDCYIDLQSGSGGTEAQ 80

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I G  AYGWL+ E GVHRLV
Sbjct: 81  DWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRISGEYAYGWLRTETGVHRLV 140

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SAVR
Sbjct: 141 RKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVR 200

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELE+QK+       E +K++IGWG Q
Sbjct: 201 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQASEETKSDIGWGSQ 260

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 261 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 299


>gi|330807738|ref|YP_004352200.1| peptide chain release factor 2 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375846|gb|AEA67196.1| Putative Peptide chain release factor 2 [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 293

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 164/286 (57%), Positives = 213/286 (74%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   LL++A+EE+D   + +    L R+   +   +F  + SGE D N+AYL++ AG+
Sbjct: 5   LADCRDLLDMAVEENDEGAVGDVVAELTRLDENLAKLEFRRMFSGEMDMNNAYLDIQAGS 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E 
Sbjct: 65  GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNT
Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNT 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++
Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYVL   + +KDLRT+IE++    VLDGD+D+++ A+L
Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTSIERSDCDKVLDGDIDEYLIASL 289


>gi|82545486|ref|YP_409433.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|82778343|ref|YP_404692.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|110643039|ref|YP_670769.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|117625122|ref|YP_854110.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|195936508|ref|ZP_03081890.1| hypothetical protein EscherichcoliO157_08602 [Escherichia coli
           O157:H7 str. EC4024]
 gi|209920345|ref|YP_002294429.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217327359|ref|ZP_03443442.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|227888439|ref|ZP_04006244.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|237706466|ref|ZP_04536947.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|254037934|ref|ZP_04871992.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|256019311|ref|ZP_05433176.1| peptide chain release factor 2 [Shigella sp. D9]
 gi|256024599|ref|ZP_05438464.1| peptide chain release factor 2 [Escherichia sp. 4_1_40B]
 gi|261226204|ref|ZP_05940485.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256541|ref|ZP_05949074.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|293406389|ref|ZP_06650315.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|293412249|ref|ZP_06654972.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|293416144|ref|ZP_06658784.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|298382125|ref|ZP_06991722.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|300815658|ref|ZP_07095882.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300820694|ref|ZP_07100845.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300896214|ref|ZP_07114763.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300906560|ref|ZP_07124251.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300921222|ref|ZP_07137595.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300925129|ref|ZP_07141043.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300928174|ref|ZP_07143716.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300936044|ref|ZP_07150992.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300947611|ref|ZP_07161783.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300954270|ref|ZP_07166733.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300980316|ref|ZP_07174970.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300995678|ref|ZP_07181206.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|301027417|ref|ZP_07190754.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|301027812|ref|ZP_07191117.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|301049326|ref|ZP_07196296.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|301303048|ref|ZP_07209175.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|301327291|ref|ZP_07220547.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301643760|ref|ZP_07243798.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|306812207|ref|ZP_07446405.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|307139578|ref|ZP_07498934.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|307310490|ref|ZP_07590138.1| peptide chain release factor 2 [Escherichia coli W]
 gi|309785302|ref|ZP_07679933.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|309793962|ref|ZP_07688387.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|312964850|ref|ZP_07779090.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|312972868|ref|ZP_07787041.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|331643580|ref|ZP_08344711.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331648636|ref|ZP_08349724.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331654388|ref|ZP_08355388.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331659020|ref|ZP_08359962.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331664463|ref|ZP_08365369.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331669625|ref|ZP_08370471.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331678877|ref|ZP_08379551.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331684516|ref|ZP_08385108.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|81242491|gb|ABB63201.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|81246897|gb|ABB67605.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|110344631|gb|ABG70868.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|115514246|gb|ABJ02321.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|209913604|dbj|BAG78678.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217319726|gb|EEC28151.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|226839558|gb|EEH71579.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|226899506|gb|EEH85765.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|227834708|gb|EEJ45174.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|281179896|dbj|BAI56226.1| peptide chain release factor 2 [Escherichia coli SE15]
 gi|281602223|gb|ADA75207.1| Peptide chain release factor 2 [Shigella flexneri 2002017]
 gi|284922839|emb|CBG35928.1| peptide chain release factor 2 (RF-2) [Escherichia coli 042]
 gi|291426395|gb|EFE99427.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|291432333|gb|EFF05315.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|291469020|gb|EFF11511.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|298277265|gb|EFI18781.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|299879074|gb|EFI87285.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|300298925|gb|EFJ55310.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|300304786|gb|EFJ59306.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|300318731|gb|EFJ68515.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300359948|gb|EFJ75818.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300394925|gb|EFJ78463.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|300401599|gb|EFJ85137.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300409324|gb|EFJ92862.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300411828|gb|EFJ95138.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300418731|gb|EFK02042.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300452808|gb|EFK16428.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300458836|gb|EFK22329.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300463814|gb|EFK27307.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300526958|gb|EFK48027.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300531587|gb|EFK52649.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300841712|gb|EFK69472.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|300846154|gb|EFK73914.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301077859|gb|EFK92665.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|305854245|gb|EFM54683.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|306909385|gb|EFN39880.1| peptide chain release factor 2 [Escherichia coli W]
 gi|307554867|gb|ADN47642.1| peptide chain release factor RF-2 [Escherichia coli ABU 83972]
 gi|307625536|gb|ADN69840.1| peptide chain release factor 2 [Escherichia coli UM146]
 gi|308122369|gb|EFO59631.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|308926422|gb|EFP71898.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|310332810|gb|EFQ00024.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|312290406|gb|EFR18286.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|313647930|gb|EFS12376.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|315062195|gb|ADT76522.1| peptide chain release factor RF-2 [Escherichia coli W]
 gi|315256773|gb|EFU36741.1| peptide chain release factor 2 [Escherichia coli MS 85-1]
 gi|315289447|gb|EFU48842.1| peptide chain release factor 2 [Escherichia coli MS 110-3]
 gi|315293877|gb|EFU53229.1| peptide chain release factor 2 [Escherichia coli MS 153-1]
 gi|315295678|gb|EFU54998.1| peptide chain release factor 2 [Escherichia coli MS 16-3]
 gi|315614954|gb|EFU95592.1| peptide chain release factor 2 [Escherichia coli 3431]
 gi|320175922|gb|EFW51000.1| peptide chain release factor 2 [Shigella dysenteriae CDC 74-1112]
 gi|320182207|gb|EFW57110.1| peptide chain release factor 2 [Shigella boydii ATCC 9905]
 gi|320184566|gb|EFW59367.1| peptide chain release factor 2 [Shigella flexneri CDC 796-83]
 gi|320189234|gb|EFW63893.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195009|gb|EFW69638.1| peptide chain release factor 2 [Escherichia coli WV_060327]
 gi|320202550|gb|EFW77120.1| peptide chain release factor 2 [Escherichia coli EC4100B]
 gi|320640534|gb|EFX10073.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645781|gb|EFX14766.1| peptide chain release factor 2 [Escherichia coli O157:H- str.
           493-89]
 gi|320651081|gb|EFX19521.1| peptide chain release factor 2 [Escherichia coli O157:H- str. H
           2687]
 gi|320656577|gb|EFX24473.1| peptide chain release factor 2 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662097|gb|EFX29498.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667172|gb|EFX34135.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154771|gb|EFZ40969.1| peptide chain release factor 2 [Escherichia coli EPECa14]
 gi|323162519|gb|EFZ48369.1| peptide chain release factor 2 [Escherichia coli E128010]
 gi|323167904|gb|EFZ53594.1| peptide chain release factor 2 [Shigella sonnei 53G]
 gi|323173888|gb|EFZ59517.1| peptide chain release factor 2 [Escherichia coli LT-68]
 gi|323180334|gb|EFZ65886.1| peptide chain release factor 2 [Escherichia coli 1180]
 gi|323183444|gb|EFZ68841.1| peptide chain release factor 2 [Escherichia coli 1357]
 gi|323188711|gb|EFZ73996.1| peptide chain release factor 2 [Escherichia coli RN587/1]
 gi|323935878|gb|EGB32177.1| peptide chain release 2 [Escherichia coli E1520]
 gi|323941589|gb|EGB37769.1| peptide chain release [Escherichia coli E482]
 gi|323946624|gb|EGB42647.1| peptide chain release 2 [Escherichia coli H120]
 gi|323951671|gb|EGB47546.1| peptide chain release [Escherichia coli H252]
 gi|323957389|gb|EGB53111.1| peptide chain release [Escherichia coli H263]
 gi|323960813|gb|EGB56434.1| peptide chain release [Escherichia coli H489]
 gi|323966691|gb|EGB62123.1| peptide chain release [Escherichia coli M863]
 gi|323971672|gb|EGB66901.1| peptide chain release [Escherichia coli TA007]
 gi|323978818|gb|EGB73899.1| peptide chain release [Escherichia coli TW10509]
 gi|324005542|gb|EGB74761.1| peptide chain release factor 2 [Escherichia coli MS 57-2]
 gi|324011760|gb|EGB80979.1| peptide chain release factor 2 [Escherichia coli MS 60-1]
 gi|324017287|gb|EGB86506.1| peptide chain release factor 2 [Escherichia coli MS 117-3]
 gi|324115093|gb|EGC09058.1| peptide chain release [Escherichia fergusonii B253]
 gi|324119931|gb|EGC13810.1| peptide chain release [Escherichia coli E1167]
 gi|325498452|gb|EGC96311.1| peptide chain release factor 2 [Escherichia fergusonii ECD227]
 gi|326339026|gb|EGD62841.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1044]
 gi|326343092|gb|EGD66860.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1125]
 gi|327251653|gb|EGE63339.1| peptide chain release factor 2 [Escherichia coli STEC_7v]
 gi|331037051|gb|EGI09275.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331042383|gb|EGI14525.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331047770|gb|EGI19847.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331053602|gb|EGI25631.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331058394|gb|EGI30375.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331063293|gb|EGI35206.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331073707|gb|EGI45028.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331078131|gb|EGI49337.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|332086815|gb|EGI91951.1| peptide chain release factor 2 [Shigella boydii 5216-82]
 gi|332087643|gb|EGI92770.1| peptide chain release factor 2 [Shigella dysenteriae 155-74]
 gi|332090885|gb|EGI95976.1| peptide chain release factor 2 [Shigella boydii 3594-74]
 gi|332344786|gb|AEE58120.1| peptide chain release factor protein PrfB [Escherichia coli UMNK88]
 gi|332752927|gb|EGJ83311.1| peptide chain release factor 2 [Shigella flexneri 4343-70]
 gi|332753726|gb|EGJ84105.1| peptide chain release factor 2 [Shigella flexneri K-671]
 gi|332754583|gb|EGJ84949.1| peptide chain release factor 2 [Shigella flexneri 2747-71]
 gi|332765821|gb|EGJ96034.1| peptide chain release factor 2 [Shigella flexneri 2930-71]
 gi|332999677|gb|EGK19262.1| peptide chain release factor 2 [Shigella flexneri VA-6]
 gi|333000272|gb|EGK19855.1| peptide chain release factor 2 [Shigella flexneri K-218]
 gi|333015042|gb|EGK34385.1| peptide chain release factor 2 [Shigella flexneri K-304]
          Length = 293

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|157148427|ref|YP_001455746.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
 gi|157085632|gb|ABV15310.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
          Length = 293

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
          Length = 327

 Score =  338 bits (868), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 216/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EI WG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
 gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
          Length = 331

 Score =  338 bits (868), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 174/321 (54%), Positives = 226/321 (70%), Gaps = 4/321 (1%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ L+ E   + +++   +++Q    D ++++ELA EE D S+  E  + +
Sbjct: 4   PDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIGETI 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           + +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEKR FK 
Sbjct: 64  KDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V 
Sbjct: 124 ETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVV 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P + D +EI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERSQ KN
Sbjct: 184 PEITDDVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           + +A  MLR+KLYE ++++++ E+A I GE S  +I WG QIRSYV  PY MVKD RT +
Sbjct: 244 RERAMTMLRSKLYERKIEEQQKELAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTQV 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGDLD F+   L
Sbjct: 302 ETGNVGAVMDGDLDGFIDGYL 322


>gi|317013590|gb|ADU81026.1| peptide chain release factor 2 [Helicobacter pylori Gambia94/24]
          Length = 363

 Score =  338 bits (868), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 177/337 (52%), Positives = 241/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  ++     K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQ--SSTKNEEKSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|331674375|ref|ZP_08375135.1| peptide chain release factor 2 [Escherichia coli TA280]
 gi|331068469|gb|EGI39864.1| peptide chain release factor 2 [Escherichia coli TA280]
          Length = 291

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 9   LLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 68

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 69  DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 128

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 129 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 188

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 189 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 248

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 249 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 287


>gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453]
 gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453]
          Length = 339

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 175/325 (53%), Positives = 226/325 (69%), Gaps = 4/325 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K   P  W +  +A+ L+ E   + +++   +++Q    D +++ ELA EE D S+  E 
Sbjct: 8   KMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADEEGDDSLAGEI 67

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEKR
Sbjct: 68  GETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKR 127

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 128 GFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P ++D IE++I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERS
Sbjct: 188 CDVVPEINDEIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERS 247

Query: 269 QHKNKAQAWNMLRAKLYELEL-QKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           Q KN+ +A  MLR+KLYE ++ ++++E+A I GE S  EI WG QIRSYV  PY M KD 
Sbjct: 248 QIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQS--EIAWGSQIRSYVFHPYSMAKDH 305

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RT +E  +   V+DGDLD F+   L
Sbjct: 306 RTQVETGNIGAVMDGDLDAFIDGYL 330


>gi|217974576|ref|YP_002359327.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
 gi|254790920|sp|B8E5Q1|RF2_SHEB2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217499711|gb|ACK47904.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
          Length = 365

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 174/350 (49%), Positives = 237/350 (67%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 AKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 368

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 175/334 (52%), Positives = 226/334 (67%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++++ L  K  +P  W +   A+ L +E   L   +   K +  +  D   L E+ +EE 
Sbjct: 30  EKIAELEYKMGEPSFWDDAAAAQKLNQELAALKGGVDTYKGLMAKYEDAETLYEMGIEEG 89

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+  +    L  I   +E  Q E LLSG+ D+NDA L +HAGAGGTE+QDW  MLLRM
Sbjct: 90  DASMEDDIRAELDLIAEGLETLQLEVLLSGDYDANDAILTLHAGAGGTEAQDWTQMLLRM 149

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+LK E+GVHRLVRISP+DS +
Sbjct: 150 YGRWAERHGFTVETADLQPGDEAGVKSATLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFS+  V P +DD++E+ I+  D R+D YRASGAGGQH+N T SAVR+TH PTG+V
Sbjct: 210 RRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY
Sbjct: 270 VQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPY 329

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            MVKD+RTN E  +   V+DG+LD F++A L  K
Sbjct: 330 TMVKDVRTNAETGNVQAVMDGELDPFIRAYLNAK 363


>gi|229541533|ref|ZP_04430593.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
 gi|229325953|gb|EEN91628.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
          Length = 327

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 168/321 (52%), Positives = 227/321 (70%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W +  EA+ ++ E   L   ++  +E++ +  D  +  ELA EE+D  + +E    
Sbjct: 3   EPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKEENDSELKEELEAE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+    ++   + + LL+G  D+N+A LE+H GAGGTESQDW +MLLRMYTRW EK+ FK
Sbjct: 63  LEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRWGEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAG+KS TLL KG NAYG+LK E+G+HRLVRISP+D+  RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+E+   D R+DTYRASGAGGQH+N T SAVRITHIPTG+VV CQ ERSQ +
Sbjct: 183 MPEIDDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQSERSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+ QA  ML+AKLY+ E++++E ++A I    + EIGWG QIRSYV  PY MVKD RTN+
Sbjct: 243 NREQAMKMLKAKLYQKEVEEKEKQLAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNV 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG++D F+ A L
Sbjct: 302 ETGNVQAVMDGEIDPFIDAYL 322


>gi|290476399|ref|YP_003469304.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
 gi|289175737|emb|CBJ82540.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
          Length = 286

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 164/280 (58%), Positives = 210/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L++++ ++   +F  + SG+ DS + YL++ AG+GGTE+Q
Sbjct: 4   LLELAVEADDEETFNEAVAELEQLEEKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQ 63

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RM+ RWAE + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 64  DWASMLMRMFLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLV 123

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 124 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 183

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG Q
Sbjct: 184 ITHIPTGLVTQCQNDRSQHKNKDQAMKQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQ 243

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 244 IRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 282


>gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)]
          Length = 325

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 226/321 (70%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P LW +   A  + +E+  LD  I+ I  ++  L D   +LELA+E DD  +L +   
Sbjct: 2   ESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEADDEGLLSDVQQ 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   + +VE  +F+ + +GE D N+ ++++ +G+GGTE+QDWA MLLRMYTRW E   F
Sbjct: 62  ELNAAQAQVEDLEFKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K +  E+  G  AG+KSA+  + G  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++
Sbjct: 122 KVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD I+I+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH PT  VVQCQ ERSQH
Sbjct: 182 VSPEIDDDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NKA A  MLRAKLYELE+QKR E     E +K+++GWG QIRSYVL   + +KDLRT +
Sbjct: 242 GNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWGSQIRSYVLDDSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDGDLD F++A+L
Sbjct: 301 ETFNTGAVLDGDLDQFIEASL 321


>gi|317008842|gb|ADU79422.1| peptide chain release factor 2 [Helicobacter pylori India7]
          Length = 363

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 241/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+ + +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDINKEKVRLNRLLETYQKTKNALDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_36I24]
 gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium
           HF0500_02A10]
          Length = 334

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 163/317 (51%), Positives = 222/317 (70%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W N  +A  ++ E   L N +    ++  ++ +   + +L   EDD  +  E    + +
Sbjct: 6   FWDNQDKASEVIAESNRLKNWVKPWHDLNTKVSELTEIRDLLEHEDDEDLTHELISEVDK 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+  +E  +  ++L G  D   A L VH GAGG ESQDWA ML RMY+RWAE   +    
Sbjct: 66  IEGPIEDLELRTMLQGPDDHRGAILTVHPGAGGLESQDWAEMLTRMYSRWAENHGYDLNV 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L++  G+EAGIKSATL + G +AYG+LK E+G+HRLVRISP+D+ SRRHTSF+S+++YP+
Sbjct: 126 LDMQPGDEAGIKSATLEVVGGHAYGYLKAEKGIHRLVRISPFDAQSRRHTSFASVFIYPL 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD IEIEI+ESD R+DT+RASGAGGQHVN TDSA+RITHIPTG+ V CQQERSQH N+A
Sbjct: 186 VDDEIEIEIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQERSQHMNRA 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+A LYE  L+++E+     E++KT+IGWG QIRSYV QPY MV D RT+++ + 
Sbjct: 246 TAMKMLQASLYERALEEKEQEKEAIEATKTDIGWGNQIRSYVFQPYTMVNDHRTDLKISD 305

Query: 335 PSDVLDGDLDDFMKATL 351
            + V+DG+LD F++A L
Sbjct: 306 VNKVMDGNLDPFIEAYL 322


>gi|222034586|emb|CAP77328.1| Peptide chain release factor 2 [Escherichia coli LF82]
          Length = 293

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|138896684|ref|YP_001127137.1| peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
          Length = 327

 Score =  338 bits (868), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 177/326 (54%), Positives = 230/326 (70%), Gaps = 8/326 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91
           P  W +   A+ ++ E   L   +   + + +R  DNL +  EL  EE D  +  E  + 
Sbjct: 4   PGFWDDQKAAQAIISEANALKELVGEFESLAERF-DNLEVTYELLKEEPDDELQAELVEE 62

Query: 92  LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  KL  ++ QFE   LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 63  AK--KLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            KN+ +A NML+AKLY+ ++++++ E+A +    + EIGWG QIRSYV  PY +VKD RT
Sbjct: 241 IKNREKAMNMLKAKLYQKKMEEQQAELAEL-RGEQKEIGWGSQIRSYVFHPYSLVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N+E  +   V+DG++D F+ A L  K
Sbjct: 300 NVEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|145297980|ref|YP_001140821.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223622|sp|A4SJK1|RF2_AERS4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|142850752|gb|ABO89073.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 365

 Score =  338 bits (867), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 176/350 (50%), Positives = 237/350 (67%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G FD+D   +RL  +N + E P +W     A+ L +ER  L+N +  I  
Sbjct: 13  ELSERTELLRGYFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVSLENVVGTIDV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ LA+E +D     E       ++ ++   +F  + SG+ D +D Y+++
Sbjct: 73  LTQGAEDVEMLVSLAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDGSDCYIDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW +   +K E +E+ DG+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIELSDGDVAGIKSATVKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+       E 
Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 TKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|187932243|ref|YP_001892228.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713152|gb|ACD31449.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 325

 Score =  338 bits (867), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 228/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I   L     LLEL  E  D S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKE--DESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
 gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
          Length = 339

 Score =  338 bits (867), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 174/325 (53%), Positives = 228/325 (70%), Gaps = 4/325 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K   P  W +  +A+ L+ E   + +++   +++Q    D ++++ELA EE D S+  E 
Sbjct: 8   KMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEI 67

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEKR
Sbjct: 68  GETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKR 127

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 128 GFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P ++D +E++I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERS
Sbjct: 188 CDVVPEINDEVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERS 247

Query: 269 QHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           Q KN+ +A  MLR+KLYE ++++++ E+A I GE S  +I WG QIRSYV  PY MVKD 
Sbjct: 248 QIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDH 305

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RT +E  +   V+DGDLD F+   L
Sbjct: 306 RTQVETGNIGAVMDGDLDGFIDGYL 330


>gi|13959455|sp|P57511|RF2_BUCAI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  338 bits (867), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 161/351 (45%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R++  L    D++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI
Sbjct: 14  LNRRVQDLKRYLDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ 
Sbjct: 74  EENIKEVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW +
Sbjct: 134 SGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQH
Sbjct: 194 TETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +
Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++I WG QIRSY+L   + +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 314 KSDITWGNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 363


>gi|297379396|gb|ADI34283.1| peptide chain release factor 2 [Helicobacter pylori v225d]
          Length = 363

 Score =  338 bits (867), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  +++ L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILESVLIAK 362


>gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
          Length = 327

 Score =  338 bits (867), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 216/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  + 
Sbjct: 3   EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELEER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   F+
Sbjct: 63  IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI P+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD F+ A L
Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322


>gi|227112636|ref|ZP_03826292.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 293

 Score =  338 bits (867), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 208/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EEDD     +T+  L  ++ ++   +F  + SG+ DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEEDDEETFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 71  DWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 289


>gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
 gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
          Length = 368

 Score =  338 bits (867), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 181/356 (50%), Positives = 243/356 (68%), Gaps = 12/356 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++++L  L G  D D  ++ ++    K   P  W +  +A+ ++ E     NAI  + E
Sbjct: 12  EVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISEL----NAIKSVVE 67

Query: 62  IQDRL---CDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
             +RL   C++L  L+ELA EE D S+  E    +  +  +V   + + LL+   D  +A
Sbjct: 68  HYERLNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKLNA 127

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LE+H GAGGTESQDWA ML RMYTRWAEKR FK E L+  DG+EAGIKS T+ +KG NA
Sbjct: 128 ILELHPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGYNA 187

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P + + IE+EI   D ++DTYRASG
Sbjct: 188 YGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITEDIEVEIRTEDLKVDTYRASG 247

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IA 296
           AGGQHVN T+SA+RITHIPTG+VV CQQERSQ +N+ +A NMLR+KLYE +++++++ +A
Sbjct: 248 AGGQHVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQKHLA 307

Query: 297 NI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            I GE S  +I WG QIRSYV  PY MVKD RT++E  +   V+DGDLD F+   L
Sbjct: 308 EIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYL 361


>gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|167656758|gb|EDS00888.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum V10Sc8a]
          Length = 370

 Score =  338 bits (867), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 232/348 (66%), Gaps = 4/348 (1%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L  L G  D DN    +  L  ++  P  W +V  ++ + ++     N +   +++++ 
Sbjct: 17  ELKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRES 76

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D + +LELA EEDD S+L E  +  +  + E+E ++  +LLSGE D N+A L  HAGA
Sbjct: 77  YDDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGA 136

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW  ML RMY  WAE+   K   L+  DGEEAGIKSA++L++G NAYG+LK E 
Sbjct: 137 GGTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSEN 196

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN 
Sbjct: 197 GVHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNK 256

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSK 303
           T SAVRITHIPTG+V  CQ ERSQH+N+  A  ML++KL  LE+++RE +  I +    +
Sbjct: 257 TSSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKL--LEIKEREHLDKISDIKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +I WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L
Sbjct: 315 LQIAWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYL 362


>gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
 gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
          Length = 367

 Score =  338 bits (866), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 178/354 (50%), Positives = 242/354 (68%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +   P+ W +   A+ ++ E   L + +   + 
Sbjct: 13  KMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLVGEFQS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  + QE     +++  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFENLEVTYELIKEEPDEDLQQELVAEAKKLTKDFSEFELQLLLNEPYDKNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAG+KS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD IEIEI   + ++DTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEEIKVDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300
           HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ E+A I  
Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEI-R 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 312 GEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365


>gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2]
 gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter
           eiseniae EF01-2]
          Length = 381

 Score =  338 bits (866), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 163/341 (47%), Positives = 239/341 (70%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  ++   +DP +W +  +A+ L +E++ LD+ +S + ++   L DN 
Sbjct: 38  GGIFDYDAKFERLRTVDAALQDPAVWNDPKKAQALGKEKKSLDDVVSMLDKLGRELADNT 97

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ +E D + L        R++  +E  +F  + S EAD+ + ++++ AGAGGTE+
Sbjct: 98  ELFEMSKQEGDDAGLLALQAEAARLRPGIEQLEFRRMFSKEADALNCFVDIQAGAGGTEA 157

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA MLLR Y R+AE++ FK    E   G+ AG+KSAT+ ++G  AYG L+ E GVHRL
Sbjct: 158 CDWAGMLLRQYLRYAERKGFKATVEEETPGDVAGLKSATIKVEGEYAYGLLRTETGVHRL 217

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP +DDSI+I+I+ +D R DT+R+SGAGGQH+N TDSAV
Sbjct: 218 VRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTDSAV 277

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTG+VVQCQ  RSQH N+  AW  LR++LY+ E + R++     E SKT++GWG 
Sbjct: 278 RLTHLPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHERRLRQQEQQKLEDSKTDVGWGH 337

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT++E ++   VLDGDLD F++A L
Sbjct: 338 QIRSYVLDNSR-IKDLRTHVEISATQKVLDGDLDAFIEAAL 377


>gi|67461212|sp|Q927Y4|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  338 bits (866), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 175/350 (50%), Positives = 228/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             
Sbjct: 12  KTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++      I LEL  EE D  +  E   +++     +   + + +LS   D N+A LE+
Sbjct: 72  LEEEQESMEISLELLKEEADEDLQAELEKDIKAYVATISEFELKLMLSDPYDKNNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E        
Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 361


>gi|188526975|ref|YP_001909662.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|238691887|sp|B2US00|RF2_HELPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188143215|gb|ACD47632.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|308061460|gb|ADO03348.1| peptide chain release factor 2 [Helicobacter pylori Cuz20]
          Length = 363

 Score =  338 bits (866), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|88706910|ref|ZP_01104609.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
 gi|88698832|gb|EAQ95952.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
          Length = 299

 Score =  338 bits (866), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 161/296 (54%), Positives = 216/296 (72%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +S I  +     D L L+E+A EEDD + + E    +Q +   +E  +F  + +GE D N
Sbjct: 1   MSSIDALDTGASDTLDLIEMAAEEDDEAAVAELEQEIQGLLKVLEKLEFRRMFNGEMDPN 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A+L++ +G+GGTE+QDWA +LLRMY RW E + F TE +E   G+ AGIKSAT+   G 
Sbjct: 61  NAFLDIQSGSGGTEAQDWAEILLRMYLRWGEAKGFSTELIEASGGDVAGIKSATIKFTGE 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRA
Sbjct: 121 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVR+TH P+G+VVQCQ ERSQH+N+  A  +LR KLYE+E+ KR E 
Sbjct: 181 SGAGGQHVNKTDSAVRLTHNPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEILKRNEE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             I E +K +IGWG QIRSYVL   + +KDLRTN+E ++   VLDGD+D F++A+L
Sbjct: 241 KQIMEDNKADIGWGSQIRSYVLDASR-IKDLRTNVETSNTQAVLDGDIDQFIEASL 295


>gi|308183967|ref|YP_003928100.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
 gi|308059887|gb|ADO01783.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
          Length = 363

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|217031931|ref|ZP_03437433.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298736886|ref|YP_003729416.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
 gi|216946400|gb|EEC25005.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298356080|emb|CBI66952.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
          Length = 363

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELGRIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
 gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
          Length = 327

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 177/326 (54%), Positives = 230/326 (70%), Gaps = 8/326 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91
           P  W +   A+ ++ E   L   +   + + +R  DNL +  EL  EE D  +  E  + 
Sbjct: 4   PGFWDDQKAAQAIISEANALKELVGEFESLAERF-DNLEVTYELLKEEPDDELQAELVEE 62

Query: 92  LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  KL  ++ QFE   LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 63  AK--KLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            KN+ +A NML+AKLY+ ++++++ E+A +    + EIGWG QIRSYV  PY +VKD RT
Sbjct: 241 IKNREKAINMLKAKLYQKKMEEQQAELAEL-RGEQKEIGWGSQIRSYVFHPYSLVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N+E  +   V+DG++D F+ A L  K
Sbjct: 300 NVEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
 gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
          Length = 368

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 173/334 (51%), Positives = 228/334 (68%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++++ L  K  +P  W +   A+ L +E   L   +   +++  +  D   L E+ +EE+
Sbjct: 30  EKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDLVAKYEDAETLYEMGIEEN 89

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+  +    L  I   +E  Q E LLSGE D+NDA L +HAGAGGTE+QDW  MLLRM
Sbjct: 90  DASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTLHAGAGGTEAQDWTQMLLRM 149

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+  F  +  ++  G+EAG+KSATL IKG NAYG+LK E+GVHRLVRISP+DS +
Sbjct: 150 YGRWAERHGFTVDTADLQPGDEAGVKSATLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFS+  V P +DD++E+ I+  D R+D +RASGAGGQH+N T SAVR+TH PTG+V
Sbjct: 210 RRHTSFSACDVMPEIDDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIV 269

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY
Sbjct: 270 VQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGVQQKIEWGSQIRSYVFQPY 329

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            MVKD+RTN E  +   V+DGD+D F++A L  K
Sbjct: 330 TMVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363


>gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|6174964|sp|P28367|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis]
 gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis]
 gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 366

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 173/352 (49%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +L    G  D ++   R++ L+ +  DP  W +  +A+ ++ E   L + ++  K++
Sbjct: 13  MASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKKL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   +  +  +L  EE D  +  E    L+ +  E    + + LLS   D N+A LE+H
Sbjct: 73  NESHEELQMTHDLLKEEPDTDLQLELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW +MLLRMYTRW E+R FK E L+   G+EAGIKS TLLIKG NAYG+LK
Sbjct: 133 PGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P  +D I+I+I   D ++DTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT VVV CQ ERSQ KN+ +A  ML+AKLY+  +++++   +     
Sbjct: 253 VNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 313 QKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSK 364


>gi|113969170|ref|YP_732963.1| peptide chain release factor 2 [Shewanella sp. MR-4]
 gi|114048688|ref|YP_739238.1| peptide chain release factor 2 [Shewanella sp. MR-7]
 gi|113883854|gb|ABI37906.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-4]
 gi|113890130|gb|ABI44181.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-7]
          Length = 352

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 172/342 (50%), Positives = 234/342 (68%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 308 SQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 348


>gi|308063032|gb|ADO04919.1| peptide chain release factor 2 [Helicobacter pylori Sat464]
 gi|317176986|dbj|BAJ54775.1| peptide chain release factor 2 [Helicobacter pylori F16]
          Length = 363

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|326564766|gb|EGE14978.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1]
          Length = 304

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 172/300 (57%), Positives = 222/300 (74%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           LD  +  I  +  +L D   +LELA+E+DD S+L +    L      VE  +F  + SGE
Sbjct: 2   LDGIVGVIDGLSAKLDDAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT++
Sbjct: 62  MDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIM 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RID
Sbjct: 122 VKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R E     E SK++IGWG QIRSYVL   + +KDLRT +E ++ + VL+GDLD F++A+L
Sbjct: 242 RMEKQQALEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKFIEASL 300


>gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039699|gb|EEG49945.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
          Length = 348

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 164/334 (49%), Positives = 232/334 (69%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  +R+  L  + E P  W +  E++  M+E +++ + +   + ++ ++ D   L+E+  
Sbjct: 3   NKEKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGY 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE+D  ++ E  + L   +   +  + ++LLSGE DSNDA + +HAGAGGTES DWA+ML
Sbjct: 63  EENDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTRWA+K+ F  E L+  DG+EAGIKS T  ++G NAYG+LK E+GVHRLVRISP++
Sbjct: 123 YRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFN 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  +R TSF S  V P +++ +++EI + D R+DTYR+SGAGGQH+N T SA+RITH+PT
Sbjct: 183 AAGKRQTSFVSCDVMPDIEEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHLPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQH NK +A  ML+AKLY L+ Q+ EE  +      TEIGWG QIRSYV+
Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSYVM 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QPY MVKD RT+ E  +   V+DG++D F+ A L
Sbjct: 303 QPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYL 336


>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 348

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 169/334 (50%), Positives = 229/334 (68%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q+L  L+     P  W +  +A+ +  ER +L + +  +  I++++      +EL   E 
Sbjct: 8   QKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIELLELEP 67

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    Q+  + ++ ++  +   + ESLLSGE DS +A + V AG+GG E+ DWA MLLRM
Sbjct: 68  DEEAKQDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACDWAEMLLRM 127

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAEK  +  E ++    + AGIKSAT ++KGP AYG+L+GEQGVHRLVRISP+DSN 
Sbjct: 128 YLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVRISPFDSNK 187

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+++ V P + + I++EI+E D RIDT+RASGAGGQHVN TDSAVRITHIPTG+V
Sbjct: 188 RRHTSFAAVSVIPEIGEEIKVEINEDDLRIDTFRASGAGGQHVNKTDSAVRITHIPTGIV 247

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ ERSQ +N+A+A  ML+AKLY+LE++K++E     E  K EI WG QIRSYV  PY
Sbjct: 248 VSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWGSQIRSYVFHPY 307

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QMVKDLRT  E  +   V+DG++D FM+  L  K
Sbjct: 308 QMVKDLRTGYETGNIQAVMDGEIDSFMETYLKYK 341


>gi|238796545|ref|ZP_04640052.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
 gi|238719523|gb|EEQ11332.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
          Length = 303

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 167/300 (55%), Positives = 215/300 (71%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           ++  ++ I ++   + D   LLELA+E DD     E    L  +  ++   +F  + SGE
Sbjct: 1   MEEIVTTIDQLDQGMEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGE 60

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ 
Sbjct: 61  YDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIK 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID
Sbjct: 121 IIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK
Sbjct: 181 VYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +     + E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 241 KNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 299


>gi|317179435|dbj|BAJ57223.1| peptide chain release factor 2 [Helicobacter pylori F30]
          Length = 363

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
 gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
          Length = 372

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 169/346 (48%), Positives = 235/346 (67%), Gaps = 1/346 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +++ L    D D+  + L  L+ +   P  W +   ++ ++++R  ++  +     +
Sbjct: 12  LTSRISSLRRSLDLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D  +++EL  E  D   L E     +R+K  VE  +F+ +LSG  D N  ++ V+
Sbjct: 72  NRQADDVRVMIELGEESSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDRNGCFVSVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWANMLLRM  R+ EK+ +K    +  DGEEAG+KSAT  + G  AYG LK
Sbjct: 132 SGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVR+SP+DSN+RRHTSF+S++V+P +++  I+I I++SD R+DTYR+SG+GGQ
Sbjct: 192 AEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT +VV CQ ERSQ  N+A A  +LRAKLYE E+++R   A+    
Sbjct: 252 HVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+
Sbjct: 312 EKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFV 357


>gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|67461157|sp|Q71WR9|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 366

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 174/350 (49%), Positives = 229/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             
Sbjct: 12  KTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+
Sbjct: 72  LEEEQESMEISLELLKEEADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E        
Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLD+F+ A L
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYL 361


>gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 367

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 164/338 (48%), Positives = 237/338 (70%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  ++ I++ + DN  L+
Sbjct: 27  MDYQGKKERLEEVVGLSEDPELWNDPKRAQDIGKERKLLEGIVLTLENIENGIADNRELI 86

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 87  DMVVEENDEDGFAAIVADVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY R+AE++ FK E +E  DGE AGI +AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 147 AGMLLRMYLRYAERKGFKVEVVEQDDGEIAGINNATIRLEGEYAYGLLRTETGVHRLVRY 206

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DTYRASGAGGQH+N TDSAVR+T
Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAGGQHINKTDSAVRMT 266

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQ Q  RSQH+N+     MLRAKL+ELE++KR E     E  K+++GWG QIR
Sbjct: 267 HIPTGIVVQSQNSRSQHENRRVCEEMLRAKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT  E  +   VLDGDLD F++A+L
Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363


>gi|163748442|ref|ZP_02155696.1| peptide chain release factor 2 [Shewanella benthica KT99]
 gi|161332020|gb|EDQ02697.1| peptide chain release factor 2 [Shewanella benthica KT99]
          Length = 352

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 167/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD+D   +RL  ++ + E   +W +   A+ L +ER  L+  +  I ++   L D
Sbjct: 7   AFGGIFDYDAKKERLEEVSRELESSDIWNDPDNAQALGKERAALELIVKTIDDMDTGLED 66

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              L+ELA+EE D     + S  L  +   +   +F  + SG  D  ++YL++ +G+GGT
Sbjct: 67  VEGLVELAIEEADEETFNDASAELDGLDKRLADLEFRRMFSGPHDIANSYLDIQSGSGGT 126

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWANM+LRMY RW +   FK E +E+  G+ AGIK AT+   G  A+G L+ E GVH
Sbjct: 127 EAQDWANMVLRMYLRWGDAHDFKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVH 186

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS+ +RHTSF S++VYP +DD+IEI+I+ SD RIDTYRASGAGGQH+N T+S
Sbjct: 187 RLVRKSPFDSSGKRHTSFCSVFVYPEIDDTIEIDINPSDLRIDTYRASGAGGQHINKTES 246

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+ E     E +K++IGW
Sbjct: 247 AIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNEEKQAAEDAKSDIGW 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 307 GSQIRSYVLDDAR-IKDLRTGVESRNTQSVLDGGLDMFIEASL 348


>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
 gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           UCC118]
 gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 355

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D 
Sbjct: 3   LGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDL 62

Query: 70  LILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            + LEL  E  DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGGT
Sbjct: 63  GVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGT 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GVH
Sbjct: 123 ESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T S
Sbjct: 183 RLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IGW
Sbjct: 243 AVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L
Sbjct: 303 GSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYL 345


>gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           CECT 5713]
          Length = 355

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D 
Sbjct: 3   LGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDL 62

Query: 70  LILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            + LEL  E  DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGGT
Sbjct: 63  EVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGT 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GVH
Sbjct: 123 ESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T S
Sbjct: 183 RLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IGW
Sbjct: 243 AVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L
Sbjct: 303 GSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYL 345


>gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 305

 Score =  337 bits (864), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 160/287 (55%), Positives = 211/287 (73%), Gaps = 1/287 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           YELE+QKR E A   E SK++IGWG QIRSYVL   + +KDLRT +E
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVE 286


>gi|121996859|ref|YP_001001646.1| peptide chain release factor 2 [Halorhodospira halophila SL1]
 gi|121588264|gb|ABM60844.1| bacterial peptide chain release factor 2 (bRF-2) [Halorhodospira
           halophila SL1]
          Length = 291

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 159/281 (56%), Positives = 213/281 (75%), Gaps = 2/281 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++ +A EE D   L+    ++QR+  +VE  +F  + SGE D+++A+L++ AG+GGTE+Q
Sbjct: 8   MVAMAREEGDAETLEAVQADIQRVAGQVETLEFRRMFSGEMDTSNAFLDIQAGSGGTEAQ 67

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RWAE R F+TE +E+  G+EAG+KSAT+ + G  A+GWL+ E GVHRLV
Sbjct: 68  DWAEMLLRMYLRWAEARGFETEVIEVTAGQEAGVKSATIKVSGEYAFGWLRTETGVHRLV 127

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R SP+DS  RRHTSFSS++V P +D ++++IEI  SD R+D +RASGAGGQHVNTT+SAV
Sbjct: 128 RKSPFDSGGRRHTSFSSVFVSPEIDEENVDIEIDPSDLRVDVFRASGAGGQHVNTTESAV 187

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQ Q +RSQHKN+A A + LRAKLYELE+Q+R   A   E +K++IGWG 
Sbjct: 188 RITHEPTGIVVQSQNDRSQHKNRATAMSQLRAKLYELEMQRRRAEAEAQEDTKSDIGWGN 247

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 248 QIRSYVLDQSR-IKDLRTGVEIGNTQAVLDGHLDPFIQASL 287


>gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 341

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 173/320 (54%), Positives = 222/320 (69%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ ++ +      +   I+++  ++ D  + LEL  E  D  +L E  D +
Sbjct: 15  PDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEESQDLDMLSEAEDIM 74

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
                 +   + + LLSG  DS +A LE+H GAGGTESQDW +MLLRMY RWA+K+ F+ 
Sbjct: 75  TVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQDWGSMLLRMYQRWADKQGFQV 134

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DSN+RRHTSF+SI V 
Sbjct: 135 EVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFASIEVT 194

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDSIEIEI+  D R+DTYRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ +N
Sbjct: 195 PEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQFQN 254

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           + QA  ML+AKLY+ E ++R +E+A I +  + EIGWG QIRSYV  PY MVKD RT  E
Sbjct: 255 RDQAMAMLKAKLYQREEEERAKEMAAI-KGQQLEIGWGSQIRSYVFHPYSMVKDHRTGYE 313

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD FM A L
Sbjct: 314 VGNSQAVIDGDLDGFMDAYL 333


>gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 383

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/351 (48%), Positives = 237/351 (67%), Gaps = 3/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +L   G   D      R++ L      P  W +   A+ ++ E   + + +  ++ +
Sbjct: 15  MATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGVKSVVDTMRRL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D  + L+LA EEDD  +  E +   +++K E++  + + +LSGE D N+A LE+H
Sbjct: 75  ESLLQDAEVALQLAQEEDDHDLFAEANRLAEQLKSEMDEFELQLMLSGEYDKNNAILELH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRWAE   +K E L+   GEEAGIKS TLL+KG NAYG+LK
Sbjct: 135 PGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+GVHRLVRISP+D++ RRHTSF+S+ V P + +D   IEI   + RIDTYR++GAGGQ
Sbjct: 195 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300
           HVNTTDSAVRITHIPTG+VV CQ ERSQ +N+A+A  +L+++L     ++RE E+A +  
Sbjct: 255 HVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQL-R 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + EI WG QIRSYV  PY +VKD RTN E ++   V+DG++D F+ A L
Sbjct: 314 GEQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHAYL 364


>gi|307720247|ref|YP_003891387.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306978340|gb|ADN08375.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 365

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/346 (50%), Positives = 236/346 (68%), Gaps = 2/346 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           ++  + G+ +      RL  +     D   W N   A  + +E+  L   +      ++ 
Sbjct: 16  KMKNITGVVEPKKIQTRLQEIQELENDQDFWNNADYAAKIQKEKTQLQRKLDKYNTAKNA 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   L ++A EEDD   L+   ++   ++ ++   + E LLSGE D+N+A L +H GA
Sbjct: 76  VEDAKELYDMAKEEDDSESLEALYEDAPNLEKQIRDMEIEVLLSGETDANNAILSIHPGA 135

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDWA MLLRMY RWAE+R FK E L+   G+EAGIK  ++LIKG NAYG+LK E 
Sbjct: 136 GGTESQDWAEMLLRMYKRWAERRGFKVEVLDYQAGDEAGIKDVSVLIKGENAYGYLKVEN 195

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+I I + D RIDTYR+SGAGGQHVN 
Sbjct: 196 GIHRLVRISPFDSNAKRHTSFASVMVSPEIDDDIDITIEDKDIRIDTYRSSGAGGQHVNK 255

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SA+R+THI TGVVVQCQ +RSQHKNKA A  ML+++LYELEL+  E+ A     +K+E
Sbjct: 256 TESAIRLTHIETGVVVQCQNDRSQHKNKATAMKMLKSRLYELELE--EQKAKEAGIAKSE 313

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYV+QPYQ VKD R+N   ++ S +LDGD+D+ ++  L
Sbjct: 314 IGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDNMIEGVL 359


>gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
          Length = 375

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 168/351 (47%), Positives = 237/351 (67%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
             + L+ +G   D  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++
Sbjct: 14  FKQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D + L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +H
Sbjct: 74  VSQWEDLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK
Sbjct: 134 AGAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH
Sbjct: 194 SEKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGES 301
           +N T+SAVRITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL E + +E+I ++ + 
Sbjct: 254 INKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDL-KG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            + EI WG QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 313 IQLEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 363


>gi|290511305|ref|ZP_06550674.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
 gi|289776298|gb|EFD84297.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
          Length = 299

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E +D     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 17  LLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 76

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 77  DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLV 136

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 137 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 196

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 197 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 256

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 257 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 295


>gi|317179974|dbj|BAJ57760.1| peptide chain release factor 2 [Helicobacter pylori F32]
          Length = 381

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 49  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 108

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 109 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 165

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 166 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 225

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 226 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 285

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 286 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 343

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 344 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|261837620|gb|ACX97386.1| peptide chain release factor RF-2 [Helicobacter pylori 51]
          Length = 363

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|315586172|gb|ADU40553.1| peptide chain release factor RF2 [Helicobacter pylori 35A]
          Length = 385

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 53  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELAQNDN 112

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 113 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 169

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 170 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 229

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 230 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 289

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 290 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 347

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 348 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384


>gi|332673011|gb|AEE69828.1| peptide chain release factor RF2 [Helicobacter pylori 83]
          Length = 385

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 53  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 112

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 113 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 169

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 170 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 229

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 230 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 289

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 290 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 347

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 348 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384


>gi|52425597|ref|YP_088734.1| peptide chain release factor 2 [Mannheimia succiniciproducens
           MBEL55E]
 gi|52307649|gb|AAU38149.1| PrfB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 325

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 230/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P +W    +A+ L +ER  L+  ++ IK++   L D   LLELA+E +D     E   
Sbjct: 2   EQPDVWNEPEKAQALGKERSALETVVNTIKKLDQGLEDVDGLLELAVEGEDEETFNEAVT 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + F
Sbjct: 62  ELDELEQQLAKLEFRRMFSGEHDACDCYIDLQAGSGGTEAQDWTEMLLRMYLRWAESKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +
Sbjct: 122 KTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +YP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQH
Sbjct: 182 IYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIVVQCQNDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK Q    L+AKLYE+ELQK+       E SK++IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDGDLD F++A+L
Sbjct: 301 ENRNTQAVLDGDLDRFIEASL 321


>gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
 gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
          Length = 326

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 172/321 (53%), Positives = 221/321 (68%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90
           DP+ W +   A+ ++ E   L +A++    + D   +NL +  EL  EE D  + +E   
Sbjct: 3   DPNFWNDQQAAQTVINEANGLKDAVNQFNHL-DETYENLQVSYELVKEEYDEDLAEELVS 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ F
Sbjct: 62  ELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  
Sbjct: 122 KVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P  +D I I+I   D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ 
Sbjct: 182 IMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQI 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+ QA  ML++KLY+LE++K++E        + +IGWG QIRSYV  PY +VKD RTN 
Sbjct: 242 KNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTNT 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGDLD F+ A L
Sbjct: 302 EVGNTQSVMDGDLDPFIDAYL 322


>gi|261839033|gb|ACX98798.1| peptide chain release factor 2 [Helicobacter pylori 52]
          Length = 363

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
 gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
          Length = 355

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 166/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D 
Sbjct: 3   LGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDL 62

Query: 70  LILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            + LEL  E  DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGGT
Sbjct: 63  GVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGT 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GVH
Sbjct: 123 ESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T S
Sbjct: 183 RLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IGW
Sbjct: 243 AVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIGW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L
Sbjct: 303 GSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYL 345


>gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
 gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
          Length = 326

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 172/321 (53%), Positives = 221/321 (68%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90
           DP+ W +   A+ ++ E   L +A++    + D   +NL +  EL  EE D  + +E   
Sbjct: 3   DPNFWNDQQAAQTVINEANGLKDAVNQFNHL-DETYENLQVSYELVKEEYDEDLAEELVS 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ F
Sbjct: 62  ELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  
Sbjct: 122 KVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P  +D I I+I   D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ 
Sbjct: 182 IMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQI 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+ QA  ML++KLY+LE++K++E        + +IGWG QIRSYV  PY +VKD RTN 
Sbjct: 242 KNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTNT 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGDLD F+ A L
Sbjct: 302 EVGNTQSVMDGDLDPFIDAYL 322


>gi|67461211|sp|Q8Y4D8|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/350 (49%), Positives = 228/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             
Sbjct: 12  KTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+
Sbjct: 72  LEEEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E        
Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 361


>gi|15644800|ref|NP_206970.1| peptide chain release factor 2 [Helicobacter pylori 26695]
 gi|2500142|sp|P55999|RF2_HELPY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2313254|gb|AAD07236.1| peptide chain release factor RF-2 (prfB) [Helicobacter pylori
           26695]
          Length = 363

 Score =  337 bits (863), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 177/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L +++ L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPILENSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YR+SGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRSSGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|73666975|ref|YP_302991.1| peptide chain release factor 2 [Ehrlichia canis str. Jake]
 gi|72394116|gb|AAZ68393.1| bacterial peptide chain release factor 2 (bRF-2) [Ehrlichia canis
           str. Jake]
          Length = 335

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 165/330 (50%), Positives = 227/330 (68%), Gaps = 2/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           LN +     LW +   A+ ++ ER  +   I+   E+++       LL++   + D  +L
Sbjct: 5   LNVQCSSTSLWTDNALAQNILSERARVSKIITSFTELEEEFNYYTELLDVVKNDTD-ELL 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +    L ++K  ++ K+ E L S EAD ND ++E+ +GAGGTES DW+ MLLRMY RWA
Sbjct: 64  NDIEIGLTKLKERIQKKEVECLFSNEADQNDCFIEIQSGAGGTESNDWSCMLLRMYVRWA 123

Query: 146 E-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           E    F TE +   DGEE GIKSAT+ + G NAYGW K E G+HRLVRISP++SN++RHT
Sbjct: 124 EIYHNFTTEIVYKLDGEEVGIKSATIKVTGDNAYGWSKTESGIHRLVRISPFNSNAKRHT 183

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           +FSSI V P+ D++I IE  + D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VVQCQ
Sbjct: 184 TFSSILVSPITDENINIETLDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQ 243

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
             RSQH+N A+A N+L+++LY+L+LQ++E+      + +  IGWG QIRSY++ PYQMVK
Sbjct: 244 NNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRSYIMHPYQMVK 303

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           D+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 304 DVRTGHEIGNVNSVLDGNLDPFIISALTAK 333


>gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
 gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
          Length = 367

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 182/354 (51%), Positives = 242/354 (68%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +  +P  W +   A+ ++ E   L + +   + 
Sbjct: 13  KMAKRLAEIRGSLDLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEANALKDLVGEFQS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  + QE     +R+  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFENLEVTYELIKEEPDEDLQQELVTEAKRLTKDFSEFELQLLLNEPYDKNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAGIKS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD IEIEI   + RIDTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300
           HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ E+A I  
Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQKKLEEQQAELAEI-R 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 312 GEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365


>gi|296104552|ref|YP_003614698.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059011|gb|ADF63749.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 293

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VD+ I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDEDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 372

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 169/339 (49%), Positives = 233/339 (68%), Gaps = 2/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D     L  L  +T  P  WQ++  ++ ++++ + + + I   +++  +  D  +L 
Sbjct: 25  LDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLYSQWEDLKVLT 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL++EE +  + +E    L  ++ +++  + E LL+G  D N+A L +HAGAGGTE+QDW
Sbjct: 85  ELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHAGAGGTEAQDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI
Sbjct: 145 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RRHTSF+++ V P V+D  +IEI E D  IDTYR+SGAGGQHVN T+SAVRI 
Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHVNKTESAVRIK 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312
           HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL E ++RE+I  + +  +TEIGWG QI
Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKL-KGEQTEIGWGNQI 323

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV  PY +VKD RT  E  +   V+DG++D F+ A L
Sbjct: 324 RSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362


>gi|42522998|ref|NP_968378.1| hypothetical protein Bd1489 [Bdellovibrio bacteriovorus HD100]
 gi|39575203|emb|CAE79371.1| prfB [Bdellovibrio bacteriovorus HD100]
          Length = 321

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 164/307 (53%), Positives = 218/307 (71%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E+  L+ A+        RL D+ +LLE+A E  D     E    +  ++   E  + 
Sbjct: 4   LNKEKALLEKAVGEFDAFASRLSDSKVLLEMAEEAQDEGSFSEAKAEVVALEKLGEELEL 63

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + +L+GE DSN +YL +++GAGGTES DWA+MLLRMYTR+A+K  FK + +E+ +GE AG
Sbjct: 64  KRVLNGELDSNSSYLSINSGAGGTESCDWASMLLRMYTRYADKHGFKVQIIEMTEGEGAG 123

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKS TLLI+GP AYG+LK E GVHRLVRISP+DSN+RRHTSF+S++ +  VDD I IE+ 
Sbjct: 124 IKSCTLLIEGPYAYGYLKAESGVHRLVRISPFDSNARRHTSFASVFAWAEVDDDINIEVR 183

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D ++DT+RASGAGGQHVN TDSAVR+THIP+GV+V CQ ERSQ +N+ +A  ML+A+L
Sbjct: 184 PDDLKVDTFRASGAGGQHVNRTDSAVRMTHIPSGVIVTCQVERSQIQNREKALKMLKARL 243

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE+E++KR    +   S K    WG QIRSYV+ PYQMVKD RT+ E     DV+DGDLD
Sbjct: 244 YEMEIEKRNAEKDAMNSQKKANEWGSQIRSYVMHPYQMVKDHRTDFETNQVDDVMDGDLD 303

Query: 345 DFMKATL 351
            F+ + L
Sbjct: 304 GFIMSYL 310


>gi|152991913|ref|YP_001357634.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
 gi|166225117|sp|A6Q718|RF2_SULNB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423774|dbj|BAF71277.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
          Length = 364

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS+++  +  +   D   +RL  +    +DP+ W +   A  + +E+   +  +      
Sbjct: 13  LSKKMENISNIVKPDELKKRLDEIEEMQQDPNFWNDTANAGKISQEKTRTERILETYHNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D + D +   E+A  E D   L+   ++ + +K      + + +LSGE DSN+A + +H
Sbjct: 73  NDAVYDAIEYFEMAKAEKDEETLEMLYEDAETLKERTNALEVQMMLSGEHDSNNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RWAE+  FK E L+   GEEAGIK  + +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFTSVMVSPEIDDDIDIEIEDKDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNK+ A  ML+++LYE E+ K++  A I    
Sbjct: 253 VNKTESAIRITHEPTGIVVQCQNDRSQHKNKSAAMKMLKSRLYEYEMAKKQ--AEIDGVE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYV+QPYQ VKD R+    T+   +LDGD+D  ++  L
Sbjct: 311 KSDIGWGHQIRSYVMQPYQQVKDTRSGQAFTNVDAILDGDIDKLLEGVL 359


>gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0770_41L09]
          Length = 331

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 161/261 (61%), Positives = 198/261 (75%)

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L  ++ ++E  +  ++L GE D  DA + +H GAGG ESQDWA ML+RMYTRW+E+R F
Sbjct: 62  GLASVEKDLEVLEVRTMLQGEDDHRDAIVTIHPGAGGLESQDWAGMLMRMYTRWSERRGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L++   EE GIKSATL IKG  AYG+LK E GVHRLVRISP+D  SRRHTSF+S++
Sbjct: 122 GIEVLDLQLAEEGGIKSATLEIKGECAYGYLKAEGGVHRLVRISPFDQQSRRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TDSAVRITH PTG+V  CQQERSQH
Sbjct: 182 IYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVATCQQERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK+ A  MLRA LY+  LQ++E    + E++KTEIG+G QIRSYV QPY MV D RT +
Sbjct: 242 KNKSTAMKMLRAALYQHALQEQERERAVLEATKTEIGFGNQIRSYVFQPYTMVNDHRTEL 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           + T    V+DGDLD F++A L
Sbjct: 302 KITDVQGVMDGDLDPFIEAYL 322


>gi|317012016|gb|ADU82624.1| peptide chain release factor 2 [Helicobacter pylori Lithuania75]
          Length = 363

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 176/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 31  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE    E +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 91  DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  ++     K+EIGWG QIRSYVL
Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQ--SSTKNEEKSEIGWGHQIRSYVL 325

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|120597725|ref|YP_962299.1| peptide chain release factor 2 [Shewanella sp. W3-18-1]
 gi|146294138|ref|YP_001184562.1| peptide chain release factor 2 [Shewanella putrefaciens CN-32]
 gi|120557818|gb|ABM23745.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           W3-18-1]
 gi|145565828|gb|ABP76763.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           putrefaciens CN-32]
          Length = 352

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 172/342 (50%), Positives = 233/342 (68%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 308 SQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 348


>gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223621|sp|A0KNK6|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 365

 Score =  336 bits (862), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 175/350 (50%), Positives = 236/350 (67%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+N +  I  
Sbjct: 13  ELSERTELLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDT 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ELA+E +D     E       ++ ++   +F  + SG+ D +D Y+++
Sbjct: 73  LTQGADDVAMLVELAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDPSDCYIDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW +   +K E +E  +G+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+       E 
Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 TKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|54294665|ref|YP_127080.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
 gi|53754497|emb|CAH15981.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
          Length = 335

 Score =  336 bits (861), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD   + +  +
Sbjct: 9   ESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQSELFELAREEDDEQTINDIGE 68

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY RW E   F
Sbjct: 69  ELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLRWGEHHGF 128

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++
Sbjct: 129 TTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQCQ +RSQH
Sbjct: 189 VSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQCQNDRSQH 248

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL   + +KDLRT +
Sbjct: 249 KNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   VLDG LD F++A+L
Sbjct: 308 ETSNTQAVLDGSLDQFIEASL 328


>gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 367

 Score =  336 bits (861), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 168/349 (48%), Positives = 237/349 (67%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++   L    D+D   +RL  +N   EDP +W +  +A+ L +E++ L   +  + ++
Sbjct: 16  LSQRTQELRRYLDFDAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ EE D + L        +++  +E  +F  + S EAD  + ++++ 
Sbjct: 76  TRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA MLLR Y ++AE++ FK    +   G+ AGIKSAT+ I+G  AYG L+
Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E     E +
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 316 KTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363


>gi|217034219|ref|ZP_03439638.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
 gi|216943387|gb|EEC22846.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
          Length = 381

 Score =  336 bits (861), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ ++ L ++  L ELA  ++
Sbjct: 49  QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 108

Query: 81  D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           D    S+L E +  L+    +VE K    +LSGE D+++A + +  GAGGTESQDWA++L
Sbjct: 109 DEVTLSLLYEEAPILEHSVQKVEIK---IMLSGENDASNAIITIQPGAGGTESQDWASIL 165

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVRISP+D
Sbjct: 166 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 225

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT
Sbjct: 226 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 285

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A   E  K+EIGWG QIRSYVL
Sbjct: 286 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 343

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 344 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1]
 gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1]
          Length = 329

 Score =  335 bits (860), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 168/323 (52%), Positives = 226/323 (69%), Gaps = 2/323 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ ++ E   L + +   + +++R  +  +  EL  EE D  + +E     
Sbjct: 4   PDFWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKEEPDEELQKELVAEA 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ +K 
Sbjct: 64  KKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGYKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S  V 
Sbjct: 124 ETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVV 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  DD+IEI++   + ++DTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ KN
Sbjct: 184 PEFDDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           + +A NML+AKLY+ +L++++ E+A I    + EIGWG QIRSYV  PY +VKD RTN E
Sbjct: 244 REKAMNMLKAKLYQKKLEEQQAELAEI-RGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DG++D F+ A L  K
Sbjct: 303 VGNVQAVMDGEIDVFIDAYLRSK 325


>gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
 gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
          Length = 368

 Score =  335 bits (860), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 173/334 (51%), Positives = 226/334 (67%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++++ L  K  +P  W +   A+ L +E   L   +   K +  +  D   L E+ +EE 
Sbjct: 30  EKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYKGLMAKYEDAETLYEMGIEEG 89

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+  +    L  I   +E  Q E LLSG+ D+N+A L +HAGAGGTE+QDW  MLLRM
Sbjct: 90  DASMEDDIRAELDLITEGLETLQLEVLLSGDYDANNAILTLHAGAGGTEAQDWTQMLLRM 149

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+LK E+GVHRLVRISP+DS +
Sbjct: 150 YGRWAERHGFAVETADLQPGDEAGVKSATLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFS+  V P +DD++E+ I+  D R+D YRASGAGGQH+N T SAVR+TH PTG+V
Sbjct: 210 RRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY
Sbjct: 270 VQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPY 329

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 330 TMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|149910167|ref|ZP_01898813.1| putative peptide chain release factor 2 [Moritella sp. PE36]
 gi|149806753|gb|EDM66717.1| putative peptide chain release factor 2 [Moritella sp. PE36]
          Length = 301

 Score =  335 bits (860), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 160/286 (55%), Positives = 213/286 (74%), Gaps = 2/286 (0%)

Query: 67  CDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           CD++  L+ELA+E +D     E    +  ++ ++   +F  + SG+ D+ND YL++ +G+
Sbjct: 13  CDDVEGLVELAVEAEDEETFAEAQHEIIGLEAQLAKLEFRRMFSGKHDANDCYLDIQSGS 72

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWANMLLRM+ RW E  KFK E +E+  G+ AGIK AT+ + G  AYGWL+ E 
Sbjct: 73  GGTEAQDWANMLLRMFLRWGEAHKFKVELIEVSSGDVAGIKGATIRLGGEYAYGWLRTET 132

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS+ RRHTSF+SI+VYP +DDSIEI+++ SD RID YRASGAGGQHVNT
Sbjct: 133 GVHRLVRKSPFDSSGRRHTSFASIFVYPEIDDSIEIDLNPSDLRIDVYRASGAGGQHVNT 192

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT +VVQCQ +RSQHKNK  A   +RAKL++ E+QK+     I E +K++
Sbjct: 193 TESAVRITHLPTNLVVQCQNDRSQHKNKDAAMKQMRAKLFDHEMQKQNAEKQIAEDAKSD 252

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 253 IGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 297


>gi|52842005|ref|YP_095804.1| peptide chain release factor 2 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148359322|ref|YP_001250529.1| peptide chain release factor 2 [Legionella pneumophila str. Corby]
 gi|296107369|ref|YP_003619069.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|52629116|gb|AAU27857.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281095|gb|ABQ55183.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila str.
           Corby]
 gi|295649270|gb|ADG25117.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610478|emb|CBX00050.1| hypothetical protein LPW_18051 [Legionella pneumophila 130b]
          Length = 335

 Score =  335 bits (860), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD   + +  +
Sbjct: 9   ESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQTINDIGE 68

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY RW E   F
Sbjct: 69  ELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLRWGEHHGF 128

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++
Sbjct: 129 TTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQCQ +RSQH
Sbjct: 189 VSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQCQNDRSQH 248

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL   + +KDLRT +
Sbjct: 249 KNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   VLDG LD F++A+L
Sbjct: 308 ETSNTQAVLDGSLDQFIEASL 328


>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 367

 Score =  335 bits (860), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 170/352 (48%), Positives = 241/352 (68%), Gaps = 5/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  + D D   + L  ++        W +  +AK ++++R+ L+  ++ I+ 
Sbjct: 10  ELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEETVNSIET 69

Query: 62  IQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           ++  L D   L +   EED    +IL+E  ++L+    E+E K +   LSGE DS +AYL
Sbjct: 70  LEKSLRDVEELSQTTPEEDTDTWAILEEEMESLEDKLKELELKTY---LSGEMDSKNAYL 126

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGGTE+ DWA+ML RMY RWAE++ +  E ++I   + AGIKS TLL+KGP AYG
Sbjct: 127 TIQAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVKGPYAYG 186

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +L+GEQGVHRLVRISP+DSN+RRHTSF+++ V P +D+ I IE+ + D +I+T+RASGAG
Sbjct: 187 YLRGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQIDEDINIEVRDEDLKIETFRASGAG 246

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN TD+AVR+THIPTG+VV CQQERSQ +N+ +A  +L+AKLY+LE QK  E     
Sbjct: 247 GQYVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKLMEKRKQY 306

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E  KT+IGWG QIRSYV  PY++VKDLRT  E  +   V+DGD+D F++  L
Sbjct: 307 EGEKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFL 358


>gi|238783657|ref|ZP_04627677.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
 gi|238715370|gb|EEQ07362.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
          Length = 289

 Score =  335 bits (860), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+GGTE+Q
Sbjct: 7   LLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 67  DWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG Q
Sbjct: 187 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285


>gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 368

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 172/334 (51%), Positives = 228/334 (68%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++++ L  K  +P  W +   A+ + +E   L   +   K +  +  D   L E+ +EE+
Sbjct: 30  EKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKALAAKYEDAETLYEMGIEEN 89

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+ ++    L  I   +E  Q E LLSGE D+N+A L +HAGAGGTE+QDW  MLLRM
Sbjct: 90  DPSMERDIRAELDLIAEGLETLQLEVLLSGEYDANNAILTLHAGAGGTEAQDWTQMLLRM 149

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+  F  E  ++  G+EAG+KSA+L IKG NAYG+LK E+GVHRLVRISP+DS +
Sbjct: 150 YGRWAERHGFTVETADLQPGDEAGVKSASLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFS+  V P +DD++E++I   D R+D YRASGAGGQH+N T SAVR+TH PTG+V
Sbjct: 210 RRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY
Sbjct: 270 VQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQKIEWGSQIRSYVFQPY 329

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 330 TMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|91226783|ref|ZP_01261436.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269964522|ref|ZP_06178762.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
 gi|91188914|gb|EAS75198.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269830759|gb|EEZ84978.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
          Length = 289

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 211/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EE+D     E    L  ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+Q
Sbjct: 7   LLELAVEEEDQETFDEIEPELAELEEKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW NMLLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 67  DWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLKSATVRISGEYAYGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSF+S ++YP +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG Q
Sbjct: 187 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 285


>gi|77457286|ref|YP_346791.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf0-1]
 gi|77381289|gb|ABA72802.1| putative Peptide chain release factor 2 (RF-2) protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 280

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 160/277 (57%), Positives = 209/277 (75%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+EE+D   + +  + LQ ++  +   +F  + S E D N+AYL++ AG+GGTE+QDWA
Sbjct: 1   MAVEENDEGAVNDVVEVLQGLEESLSKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           N+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR S
Sbjct: 61  NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IGWG QIRS
Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRTNIE++    VLDGD+D++++A+L
Sbjct: 241 YVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASL 276


>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
 gi|6225943|sp|O67695|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
          Length = 373

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 169/354 (47%), Positives = 250/354 (70%), Gaps = 5/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++L  +  +   +     L  L+ K  +P+ W++  +AK +++ R+ ++  ++ +K +
Sbjct: 13  LRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETLNKLKNL 72

Query: 63  QDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +  + D   L+E+  EED    +++ E    ++R   E+E K +   LSGE D+ +AYL 
Sbjct: 73  EKSVKDLEELVEITSEEDTETWAMMDEEIKEVERTLRELELKTY---LSGEMDAKNAYLT 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTE+ DWA+ML RMY RWAEK+ ++ E ++I   + AGIKS T+L+KGP AYG+
Sbjct: 130 IQAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPYAYGY 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGEQGVHRLVRISP+D+N+RRHTSF+++ V P +D+ I+IEI   D +I+T+RASGAGG
Sbjct: 190 LKGEQGVHRLVRISPFDANARRHTSFAAVSVMPQIDEDIKIEIKPEDLKIETFRASGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN TD+AVRITHIPTG+ V CQQERSQ++NK +A  +L+AKLY+LE++K EE     E
Sbjct: 250 QYVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYE 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             KT+IGWG QIRSYV  PY+++KDLRT  E  +   V+DG++D+F+++ L  K
Sbjct: 310 GEKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWK 363


>gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 367

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 167/318 (52%), Positives = 221/318 (69%), Gaps = 6/318 (1%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQ 93
            W++  +A  L +E++  +  +      +  L D + L EL+ ++ +   +L   S+ L+
Sbjct: 45  FWEDAKKAGELQKEKKRCERQLEKYNNAKSALDDAIELFELSSDDLESLEVLFAESEELE 104

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            I   ++  + E +LS   DSN+A   +  GAGGTESQDWA+ML RMY RWAE++ FK E
Sbjct: 105 SI---IKNAEIEVMLSDPLDSNNAIFTITPGAGGTESQDWASMLYRMYLRWAERKDFKVE 161

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L+  +G+EAGIK A+ +IKG NAYG+ K E GVHRLVRISP+D+N++RHTSFSS+ V P
Sbjct: 162 LLDYQEGDEAGIKDASFIIKGENAYGYAKAENGVHRLVRISPFDANAKRHTSFSSVQVSP 221

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +DD I IEI E D  IDTYRASGAGGQHVN T+SAVRITH P+G+VVQCQ +RSQHKNK
Sbjct: 222 EIDDEINIEIDEKDLEIDTYRASGAGGQHVNKTESAVRITHKPSGIVVQCQNDRSQHKNK 281

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           A A  ML++KLYELE  KRE  +N   + K + GWG QIRSYVL PYQ VKDLR+N+  T
Sbjct: 282 ASALKMLKSKLYELERLKREAESN--HTDKGDNGWGHQIRSYVLTPYQQVKDLRSNLAYT 339

Query: 334 SPSDVLDGDLDDFMKATL 351
           +   +LDGD+D  ++  L
Sbjct: 340 NVDAILDGDIDTILEGVL 357


>gi|78356848|ref|YP_388297.1| peptide chain release factor 2 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219253|gb|ABB38602.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 358

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 170/351 (48%), Positives = 227/351 (64%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M  S  L   GG FD   +  RL  +  +   P  W    +   ++RE+  L+N+++ + 
Sbjct: 1   MPFSSSLKRSGGAFDHAQSKYRLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSVARLD 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++    D    LELA EE+   +L++  +    ++  +E  +   LLS E D + A LE
Sbjct: 61  ALRQAKDDMQGWLELAEEENTQEVLEQLEEQAGILEALLEETEVGLLLSAEEDKHAAILE 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTE+QDWA MLLRMY RWAE  +FK E L+  DG+EAGIKS TL I G NAYG 
Sbjct: 121 IHPGAGGTEAQDWAEMLLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTLKIDGTNAYGL 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+G+HRL+RISPYD++ RRHTSF+S+ V P   + I I+I +SD RID +R+SG GG
Sbjct: 181 LKGEKGIHRLIRISPYDASGRRHTSFASVDVIPDAGEEITIDIKDSDLRIDIFRSSGPGG 240

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTT SAVR+THIPTG+  QCQ E+SQH NK  A  +LRA+LYE E+++R+       
Sbjct: 241 QSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRARLYEAEIRRRDAEKQADY 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +SK  IGWG QIR+Y LQPY++VKD R+N E      VLDG+LD  M+  L
Sbjct: 301 ASKEAIGWGSQIRTYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRNHL 351


>gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
 gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
          Length = 370

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 234/353 (66%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  +  +   D    +LS + T+  DP+ W N   A +L +E+  + N +   +  
Sbjct: 13  LEQKVKNIASIIKPDELRVKLSEIETQENDPNFWNNAKNAAILGKEKTKITNLLKAYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ++A  E D   L+   ++  +++  +   +   LLSGE D+ +A + +H
Sbjct: 73  FNALNDANELFDMANSESDDETLKALFEDAPKLEDSITSLEISMLLSGENDNKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E  AN GE  
Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAAANSGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+E+GWG QIRSYVL PYQ VKD R+N   ++   +LDGD+   ++  L   K
Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363


>gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
 gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
          Length = 327

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 167/321 (52%), Positives = 226/321 (70%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ +++E   +   ++  + I++ L +  +  EL  EE+D  +  +    
Sbjct: 3   DPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKEENDQELFADLDAE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           LQ+   +V   + + LLS   D+N+A LE+H GAGGTESQDWA+MLLRMY RWAE+R FK
Sbjct: 63  LQQFITDVNQFELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWAEERNFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + D ++I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT ++V CQ ERSQ K
Sbjct: 183 TPEMSDDVDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQNERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+  A  ML++KLY+LE++K R+E+ +I    + EIGWG QIRSYV  PY MVKD RT+ 
Sbjct: 243 NREAAMKMLKSKLYQLEVEKQRQELDDI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTDK 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGD++ F+ A L
Sbjct: 302 ETGNTQAVMDGDINPFIDAYL 322


>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 365

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 161/346 (46%), Positives = 239/346 (69%), Gaps = 2/346 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +G   D +   + ++ ++ K  +P  W ++ +++ L ++ + L   IS  + I+ +LC++
Sbjct: 19  MGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYESIE-KLCED 77

Query: 70  L-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L  L+EL +EE D S+ QE  +  + +  ++   + ++LLSG  D N+A L +HAGAGGT
Sbjct: 78  LNALIELGIEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILSIHAGAGGT 137

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW  MLLRMY RWA  + ++ E ++   G++AG+KS T+++KG  AYG+LKGE GVH
Sbjct: 138 EAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGYLKGEAGVH 197

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+  RRHTSF+ + V P +DD I+++I   D +IDTYR+SGAGGQHVN T+S
Sbjct: 198 RLVRISPFDAAGRRHTSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTES 257

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITHIPTG++VQCQ ERSQ +N+  A  ML+AKL +L +++++E     +    E GW
Sbjct: 258 AIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLKGEHKEAGW 317

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV QPY +VKD RTN E  + + V+DGD+D+F+ A L  K
Sbjct: 318 GNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQK 363


>gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1]
 gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1]
          Length = 327

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 173/321 (53%), Positives = 225/321 (70%), Gaps = 4/321 (1%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91
           P  W +  +A+ ++ E   L   ++  K++Q+ + +NL + LEL  EE+D  + +E  + 
Sbjct: 4   PDFWNDQQQAQGVINEANGLKELVNEYKDMQE-MQENLEVTLELVKEENDAELQEELVEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMY RWAEK+ FK
Sbjct: 63  TKDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  ++ IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH PTGVVV CQ ERSQ K
Sbjct: 183 MPEFNEEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+ QA  ML+AKLY+  ++++E E+A I    + +IGWG QIRSYV  PY MVKD RTN 
Sbjct: 243 NREQAMKMLKAKLYQKRIEEQEQELAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTNT 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGD++ F+ A L
Sbjct: 302 EMGNVQAVMDGDINGFINAYL 322


>gi|332160509|ref|YP_004297086.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607022|emb|CBY28520.1| peptide chain release factor 2; programmed frameshift-containing
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664739|gb|ADZ41383.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863446|emb|CBX73565.1| peptide chain release factor 2 [Yersinia enterocolitica W22703]
          Length = 289

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+GGTE+Q
Sbjct: 7   LLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 67  DWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG Q
Sbjct: 187 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285


>gi|238763213|ref|ZP_04624178.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
 gi|238698486|gb|EEP91238.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
          Length = 289

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+GGTE+Q
Sbjct: 7   LLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 67  DWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG Q
Sbjct: 187 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285


>gi|330817652|ref|YP_004361357.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
 gi|327370045|gb|AEA61401.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
          Length = 299

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 213/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L ELA EE+D   L  +      ++  V   +F  + S  AD N+ ++++ AGAGGTE+ 
Sbjct: 17  LFELAREENDEDTLLASEGEAAELEKRVAEIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 76

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ + G  AYG+L+ E G+HRLV
Sbjct: 77  DWASMLLRQYLRYCERKGFKTEVLEESDGDVAGIKNATIKVTGDYAYGFLRTETGIHRLV 136

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+  RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 137 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTDSAVR 196

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  ESSKT++GWG Q
Sbjct: 197 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQ 256

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + VKDLRTN+E ++   VLDGDLDDF+ A+L
Sbjct: 257 IRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFIGASL 295


>gi|54297691|ref|YP_124060.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
 gi|53751476|emb|CAH12894.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
          Length = 335

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD   + +  D
Sbjct: 9   ESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQTIIDIGD 68

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY RW E   F
Sbjct: 69  ELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLRWGEHHGF 128

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++
Sbjct: 129 TTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQCQ +RSQH
Sbjct: 189 VSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQCQNDRSQH 248

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK QA   LRAKLYELE+QK+       E++K++IGWG QIRSYVL   + +KDLRT +
Sbjct: 249 KNKDQAMKQLRAKLYELEMQKKNAEQQALEATKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   VLDG LD F++A+L
Sbjct: 308 ETSNTQAVLDGSLDQFIEASL 328


>gi|295097429|emb|CBK86519.1| bacterial peptide chain release factor 2 (bRF-2) [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 293

 Score =  335 bits (859), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VD+ I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDEDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 371

 Score =  335 bits (859), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 176/350 (50%), Positives = 245/350 (70%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFL-NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           L + +N      + D   + +S + N    DP+ W N  E+K+LM+E+      +    E
Sbjct: 13  LKKDINSFRTAMNEDELKKAISEVDNLSMSDPNFW-NSKESKVLMKEQAINKKKLEEWHE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D  +L+EL  +E +  +  +   +++ ++  + + + + +LSG+ D N+A + +
Sbjct: 72  LTGLLEDTEVLIEL-YKEGEQGVEADIETSIRTLEKTIAHFELKLVLSGQNDGNNAIITI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTE+ DWA ML RMYT +AE+  +K + L+  +GEEAGIK+AT+ IKG   YG+L
Sbjct: 131 NSGAGGTEANDWAAMLYRMYTHYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISPYDS +RRHTSF++++V P ++D IEI+ISE+D  IDTYRASGAGGQ
Sbjct: 191 KGETGVHRLVRISPYDSANRRHTSFAAVFVMPEIEDDIEIDISEADLHIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG VV CQ ERSQHKNKA A  +L+++LYELE+ K+ E     ES
Sbjct: 251 HVNTTDSAVRITHVPTGTVVTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLES 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +KTEIGWG QIRSYV+ PY+MVKDLRT  E  +   V+DG+LD F++A L
Sbjct: 311 TKTEIGWGNQIRSYVMHPYKMVKDLRTRHETGNVDAVMDGNLDAFIRAYL 360


>gi|167462917|ref|ZP_02328006.1| peptide chain release factor 2 in translation [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383023|ref|ZP_08056853.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153046|gb|EFX45506.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 332

 Score =  335 bits (859), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 226/321 (70%), Gaps = 4/321 (1%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+  + E   +  ++   + +     D  ++ +LA EEDD S+  E ++++
Sbjct: 4   PDFWDDQEKAQKTIAELNAIKGSVEQFQALSSEFGDIEVMAQLAEEEDDESLAAEVAESI 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           + I  ++E  + + LLS   D  +A LE+H GAGGTESQDWA MLLRMY RWAEK  FK 
Sbjct: 64  KGIVGKLEGFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKHDFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S  V 
Sbjct: 124 EVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCDVV 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD +++EI   D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERSQ KN
Sbjct: 184 PEIDDDVDVEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQKREE-IANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           + +A  +LR+KLYE +++++E+ +A I GE S  +I WG QIRSYV  PY MVKD RT+ 
Sbjct: 244 RERAMKLLRSKLYEKKIEEQEKHLAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTSA 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGDLD F+ A L
Sbjct: 302 ETGNAGAVMDGDLDMFIDAYL 322


>gi|260775420|ref|ZP_05884317.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608601|gb|EEX34766.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 320

 Score =  335 bits (858), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 168/317 (52%), Positives = 230/317 (72%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  
Sbjct: 1   MWNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAE 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE 
Sbjct: 61  LEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEV 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP 
Sbjct: 121 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 181 IDDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT++E  +
Sbjct: 241 QAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTSVENRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDKFIEASL 316


>gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1]
 gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1]
          Length = 370

 Score =  335 bits (858), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 168/350 (48%), Positives = 229/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + N +  + D ++    L  L+ +   P  W +  +A+ +  +R  + N I  I+ 
Sbjct: 11  QLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANKIQEIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D    +EL   E D     E    ++ +  E+   +  SLLS E D  +A + +
Sbjct: 71  VEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLETASLLSEEYDMKNAIVTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  MLLRMY RWAEK  F  E ++    + AGIKSAT ++KGP AYG+L
Sbjct: 131 QAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVKGPYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSFS++ V P + D +++EI E D RIDT+RASGAGGQ
Sbjct: 191 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDEVKVEIKEEDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRI HIPTG+ V CQ ERSQ +N+A+A  ML+AKLY+ EL+K++E     E 
Sbjct: 251 HVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQKEKQKELEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DGD+D F+++ L
Sbjct: 311 EKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYL 360


>gi|118602328|ref|YP_903543.1| peptide chain release factor 2 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567267|gb|ABL02072.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 364

 Score =  335 bits (858), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 165/330 (50%), Positives = 227/330 (68%), Gaps = 1/330 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  +  + E+P++W N  +A++L +E+  L +     K++   L D   LL +A  E+D
Sbjct: 32  RLEEVLLEMENPNIWTNPDQAQVLGQEKSKLTSICQTFKQVNSVLEDAQELLNMAQTEND 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                +  D+L  I+  +E  +FE + SG+ D N AYL++ +G+GGTE+QDWA M+LRMY
Sbjct: 92  EDTANDIIDDLDTIQSSIEKLEFERMFSGDLDVNSAYLDIQSGSGGTEAQDWAEMVLRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW EK  FK + +E   GE  GIKSAT+   G  A+GWL+ E G+HRLVR SP+++N +
Sbjct: 152 LRWGEKHNFKVKLMETSAGEVTGIKSATIHFDGKYAFGWLRTEIGIHRLVRKSPFNANGK 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S++V P VD+ I+I+I+  D R+DTYRASGAGGQHVN T+SAVRITH+PT ++V
Sbjct: 212 RHTSFCSVFVSPEVDNDIDIDINPLDLRVDTYRASGAGGQHVNKTESAVRITHLPTNIIV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ  RSQ  NK QA   L++KLYELE+QKR       E  K+ IGWG QIRSYVL   +
Sbjct: 272 QCQDGRSQRANKDQAMKQLKSKLYELEIQKRNAEKQSLEDKKSNIGWGHQIRSYVLDQSR 331

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +KDLRT +E T+ +DVLDG+LD F++A+L
Sbjct: 332 -IKDLRTGVESTNTNDVLDGNLDQFIEASL 360


>gi|88607992|ref|YP_506484.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
 gi|123491729|sp|Q2GDG2|RF2_NEOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|88600161|gb|ABD45629.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
          Length = 365

 Score =  335 bits (858), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 172/351 (49%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + +  +    D +    RL  +    + P LW++   A++L++E+  ++ ++   KE+
Sbjct: 12  LKKSVEVIRRQLDIEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +L D + ++ELA ++ +   +++    L  +K +++ K+ E L SGEAD ND  LE+ 
Sbjct: 72  SIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQ 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +GAGGTES DWA MLLRMYTRWAE   KF+ + ++  +GEE GIKS TL + G NAYGW 
Sbjct: 132 SGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWA 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+N++RHTSF+ I+V P ++  I I I E D +IDTYRASGAGGQ
Sbjct: 192 RTETGVHRLVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+P+ +VVQ Q  RSQH+NKA+A  ML+++LYE+EL+K+EE  N   +
Sbjct: 252 HVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAARN 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +  IGWG QIRSYVL PYQM+KDLRT  E  + + VLDGDLD F+ AT++
Sbjct: 312 VEDSIGWGYQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 362


>gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
 gi|224955151|gb|EEG36360.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
          Length = 371

 Score =  335 bits (858), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 168/333 (50%), Positives = 235/333 (70%), Gaps = 4/333 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +++  L ++  +   W +  +A+ + R+ ++L + +S    ++  L D   ++EL  EE+
Sbjct: 32  EQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHALELTLDDVSTMIELGNEEN 91

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S++ +  + L   ++E +  + ++LLSGE D N+A + +HAGAGGTES DWA ML RM
Sbjct: 92  DASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTLHAGAGGTESCDWAGMLYRM 151

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y++WA+   FKTE L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  
Sbjct: 152 YSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYLKSERGVHRLVRISPFNAAG 211

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +R TSF+S  V P +++ + +EI++ D RIDTYRASGAGGQH+N TDSA+RITHIPTGVV
Sbjct: 212 KRQTSFASCDVMPDIEEDLSVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHIPTGVV 271

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQ 318
           VQCQ ERSQHKNK +A  ML+AKLY + E + RE++++I GE S    GWG QIRSYV+Q
Sbjct: 272 VQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRGEVSDN--GWGNQIRSYVMQ 329

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY MVKD RT  E  +   V+DG+LD FM A L
Sbjct: 330 PYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYL 362


>gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
 gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
          Length = 368

 Score =  335 bits (858), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 171/334 (51%), Positives = 227/334 (67%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++++ L  K  +P  W +   A+ + +E   L   +   K +  +  D   L E+ +EE+
Sbjct: 30  EKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKALAAKYEDAETLYEMGIEEN 89

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D ++  +    L  I   +E  Q E LLSGE D+N+A L +HAGAGGTE+QDW  MLLRM
Sbjct: 90  DPTMEGDIRAELDAIAEGLETLQLEVLLSGEYDANNAILTLHAGAGGTEAQDWTQMLLRM 149

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+  F  E  ++  G+EAG+KSA+L IKG NAYG+LK E+GVHRLVRISP+DS +
Sbjct: 150 YGRWAERHGFSVETADLQPGDEAGVKSASLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFS+  V P +DD++E++I   D R+D YRASGAGGQH+N T SAVR+TH PTG+V
Sbjct: 210 RRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY
Sbjct: 270 VQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQKIEWGSQIRSYVFQPY 329

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 330 TMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|315268921|gb|ADT95774.1| Peptide chain release factor 2 [Shewanella baltica OS678]
          Length = 365

 Score =  335 bits (858), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 235/350 (67%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G  D+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGYLDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 313 AKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361


>gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
 gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
          Length = 368

 Score =  335 bits (858), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 171/334 (51%), Positives = 228/334 (68%), Gaps = 2/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           +LS +  +  DP+ W N   A +L +E+  + N +   +   + L D   L ++A  E+D
Sbjct: 32  KLSEIEMQENDPNFWNNAKNAAVLGKEKTKITNLLKAYENAFNALNDANELFDMANSEND 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L+   ++  +++  +   +   LLSGE D+ +A + +H GAGGTES DWA+ML RMY
Sbjct: 92  DETLKALFEDAPKLEDNITSLEISMLLSGENDNKNAIVSIHPGAGGTESNDWASMLYRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+ E+  FK E L+  +G+EAG+K  + L+KG NAYG+LK E G+HRLVR SP+DS  R
Sbjct: 152 LRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGR 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQHVN T+SAVRITHIPT +VV
Sbjct: 212 RHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVRITHIPTNIVV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ +RSQHKNKA A+ MLR++LYELEL K+E +AN GE  K+E+GWG QIRSYVL PYQ
Sbjct: 272 QCQNDRSQHKNKATAFKMLRSRLYELELMKQEAVANSGE--KSEMGWGHQIRSYVLFPYQ 329

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            VKD R+N   ++   +LDGD+   ++  L   K
Sbjct: 330 QVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363


>gi|254508224|ref|ZP_05120348.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
 gi|219548841|gb|EED25842.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
          Length = 320

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 168/317 (52%), Positives = 229/317 (72%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  
Sbjct: 1   MWNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAE 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE 
Sbjct: 61  LEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEV 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP 
Sbjct: 121 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 181 IDDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDKFIEASL 316


>gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
 gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
          Length = 372

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 233/338 (68%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D     L +L ++T +P  WQ++  ++ ++++ + L + I   +++  +  D  +L 
Sbjct: 25  LDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDLKVLT 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL+LEE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HAGAGGTE+QDW
Sbjct: 85  ELSLEEGNHDMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI
Sbjct: 145 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHVN T+SAVRI 
Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +TEIGWG QIR
Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIR 324

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV  PY +VKD RT  E  +   V+DG++D F+ A L
Sbjct: 325 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362


>gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB]
 gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 312

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 156/292 (53%), Positives = 215/292 (73%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + + + L DN ++LE+ALEE+D  +L++       ++ E+   + + LL  E D  +A +
Sbjct: 7   QRLSEELRDNELMLEMALEEEDREVLKDVHRKALSLQKELRTVELQQLLGEENDDKNAIV 66

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGTE+QDWA MLLRMY RW EK+ F  + +++ +GEEAGIKS T  + G +AYG
Sbjct: 67  SINAGAGGTEAQDWAEMLLRMYLRWCEKKSFTVQMVDMLEGEEAGIKSGTFTVSGSHAYG 126

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LKGE G+HRLVRISP+D++ RRHTSF+++ V P VD+ IE+EI ++D RIDTYRASGAG
Sbjct: 127 LLKGESGIHRLVRISPFDASGRRHTSFAAVLVIPEVDEKIEVEIKQADLRIDTYRASGAG 186

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T SAVRITH+PTG+VVQCQ E+SQH+N+  A  +LRA+LYE E + ++E     
Sbjct: 187 GQHVNKTSSAVRITHLPTGIVVQCQNEKSQHRNRDIALKILRARLYEREKRAQQEKLQEA 246

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             S  +I WG QIRSYVLQPY+++KD RT+IEK +   VLDG++DDF++  L
Sbjct: 247 HDSLDDIAWGNQIRSYVLQPYRLIKDHRTSIEKGNVEGVLDGEIDDFIEGYL 298


>gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 342

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 167/321 (52%), Positives = 227/321 (70%), Gaps = 3/321 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ ++ E   + + +  ++ ++  L D  + L+LA EEDD  +  E +   
Sbjct: 4   PDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEANRLA 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           +++K E++  + + +LSGE D N+A LE+H GAGGTESQDWA+MLLRMYTRWAE   +K 
Sbjct: 64  EQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHGYKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S+ V 
Sbjct: 124 EVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVI 183

Query: 213 P-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P + +D   IEI   + RIDTYR++GAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ +
Sbjct: 184 PEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIQ 243

Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+A+A  +L+++L     ++RE E+A +    + EI WG QIRSYV  PY +VKD RTN 
Sbjct: 244 NRARAMEILKSRLAAKRREEREQELAQL-RGEQKEIAWGSQIRSYVFHPYSLVKDHRTNY 302

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   V+DG++D F+ A L
Sbjct: 303 ETSNTQAVMDGEIDPFIHAYL 323


>gi|307822369|ref|ZP_07652601.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
 gi|307736935|gb|EFO07780.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
          Length = 347

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 175/342 (51%), Positives = 249/342 (72%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E+P +W N  EA+ L +ER  L+  ++ I +++  L D 
Sbjct: 3   LGGIFDFDVKSERLVEVLRELENPKIWDNPEEAQALGKERGQLEVIVNTINDLERGLSDA 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL +A+EEDD   ++   D+L+  +  V   +F  + SG+ D+N+A+L++ +G+GGTE
Sbjct: 63  EELLLMAVEEDDEETVETVVDDLEHFEKRVADLEFRRMFSGQMDANNAFLDIQSGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+++ RMY RW E++ FKTE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHR
Sbjct: 123 AQDWASIIERMYLRWGEQKGFKTELIEESQGDVAGIKSATIKFEGEYAFGWLRTETGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++V P +DD I+I+I+ +D R+D YRASGAGGQH+N T+SA
Sbjct: 183 LVRKSPFDSGNRRHTSFASVFVSPEIDDDIDIDINPADIRVDVYRASGAGGQHINKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQHKN+  A   L+AKLYELE++KR E A   E +K++IGWG
Sbjct: 243 VRMTHNPTGIVVQCQSDRSQHKNRDTAMKQLKAKLYELEMRKRSETAQALEDTKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E  +   VLDGDLD F++A+L
Sbjct: 303 SQIRSYVLDQSR-IKDLRTNVETGNTQAVLDGDLDQFIEASL 343


>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
 gi|156869337|gb|EDO62709.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
          Length = 374

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 159/321 (49%), Positives = 226/321 (70%), Gaps = 4/321 (1%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W ++ +++ +++    L N +S  + +     D L L+E+  EE+D SIL +    +
Sbjct: 44  PDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGYEDALTLIEMGDEEEDLSILPDAQQEV 103

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++ E+E ++  +LL+GE D+N+A L  HAGAGGTE+QDWA ML RMY RW E+  FK 
Sbjct: 104 EKVRKELEEQRLATLLTGEYDANNAILTFHAGAGGTEAQDWAEMLYRMYCRWGERHNFKV 163

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           + L+  DGEEAG+KSA +LI+G NAYG+LK E GVHRLVR+SP+D++ RRHTSF+S+ V 
Sbjct: 164 KTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSEAGVHRLVRVSPFDASGRRHTSFASLEVM 223

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +++ +E+EI+  D ++D YRASGAGGQ VN T SAVR+THIPTG+VV CQ ERSQH+N
Sbjct: 224 PEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKTSSAVRLTHIPTGIVVSCQVERSQHQN 283

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +  A  ML +KL  +E+++RE +  I +    + EIGWG QIRSYV  PY + KD RTN 
Sbjct: 284 REVAMKMLASKL--MEIKEREHLDKISDIKGVQKEIGWGSQIRSYVFMPYTLAKDHRTNY 341

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + V+DGD+D F+ A L
Sbjct: 342 EMGNINAVMDGDIDGFINAYL 362


>gi|238792836|ref|ZP_04636467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
 gi|238727944|gb|EEQ19467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
          Length = 289

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 164/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+GGTE+Q
Sbjct: 7   LLELAIEADDEETFNEAIAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 67  DWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG Q
Sbjct: 187 ITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285


>gi|95929408|ref|ZP_01312151.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134524|gb|EAT16180.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
          Length = 312

 Score =  334 bits (857), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 159/307 (51%), Positives = 220/307 (71%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++ER  L   +         + D  +L+EL  E +D +   E  + L  ++ +V+  +F
Sbjct: 1   MLKERTALQKLVDGWTSAAQTVEDLEVLVELGAESEDEATRDEVRELLPELERQVDKMEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             +LSGE DS++A L ++AGAGGTE+QDWA+MLLRMY R+ + + FKT+  +   G++AG
Sbjct: 61  ARMLSGEHDSSNAILSINAGAGGTEAQDWADMLLRMYLRFCDIKGFKTKITDYQPGDDAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KS T  ++G  AYGWL+ E G+HRLVRISP+D+ S+RHTSF S++V+P +DDSIE+E+ 
Sbjct: 121 VKSVTFTVEGDYAYGWLRPEMGIHRLVRISPFDAASKRHTSFCSVFVFPELDDSIEVELL 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D +IDT+RASGAGGQH+N TDSA+RITHIP+G+VV CQ +RSQH NKA+A   L+A+L
Sbjct: 181 DKDMKIDTFRASGAGGQHINKTDSAIRITHIPSGIVVACQDQRSQHNNKAEAIRQLKARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE QK+EE AN     K EIGWG QIRSYVL PY+MVKD RT  E  +   VLDG ++
Sbjct: 241 YELERQKKEEEANALSGDKKEIGWGSQIRSYVLHPYRMVKDHRTGFEVGNADSVLDGHIE 300

Query: 345 DFMKATL 351
            F++A L
Sbjct: 301 GFIEAYL 307


>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
          Length = 369

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 174/338 (51%), Positives = 235/338 (69%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  +  + L  ++      + W++  +AK + + R+ L+  I   + I+  L     LL
Sbjct: 23  MDISSMKEELKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTLETLQELL 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E   EED  + L   ++ +Q ++  +   + ++ LS E D N+AYL V AGAGGTE+ DW
Sbjct: 83  EEVDEEDLET-LSMIAEEIQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAGGTEACDW 141

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLRMY RWAEK  ++ E ++I+  + AGIKSATLLIKGP AYG+LKGE GVHRLVRI
Sbjct: 142 ASMLLRMYRRWAEKHGYEVEVIDINPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRI 201

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+N+RRHTSF+S+ V P +D+ I IEI E D +++T+RASGAGGQ+VN TD+AVRI 
Sbjct: 202 SPFDANARRHTSFASVSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRIR 261

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQQERSQ +N+ +A  +L+AKLY+LELQK EE     E  KT+IGWG QIR
Sbjct: 262 HIPTGITVSCQQERSQFQNRLKALELLKAKLYQLELQKLEEKKKALEGEKTDIGWGYQIR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV QPYQMVKDLRT +E  +   V+DGD+D F++  L
Sbjct: 322 SYVFQPYQMVKDLRTGLEVGNVDAVMDGDIDSFIEEYL 359


>gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437]
          Length = 331

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 173/321 (53%), Positives = 230/321 (71%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E  HL   +  +KE+++   +  ++ EL  EEDD S+L E  + 
Sbjct: 3   DPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAEEG 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +K +++  +   LLS   D N A LE+H GAGGTESQDWA +LLRMYTRWAE R +K
Sbjct: 63  LKDLKRKLDEFELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRWAEHRGYK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   GEEAG+KS TLLIKG NAYG+L+ E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHTSFVSANV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P ++D  EIEI   D +IDTYR+SGAGGQHVNTTDSAVRITH+PT +VV CQ ERSQ K
Sbjct: 183 MPEIEDDDEIEIRSEDIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQSERSQIK 242

Query: 272 NKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+ +A  +L+A+L E ++ +K++EIA + +  +TEIGWG QIRSYV  PY MVKD RT +
Sbjct: 243 NRDRAMKILKARLVERQMEEKQKEIAEL-KGEQTEIGWGNQIRSYVFHPYSMVKDHRTQV 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG++D F++A L
Sbjct: 302 EVGNVQSVVDGEIDTFIEAYL 322


>gi|261342293|ref|ZP_05970151.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315634|gb|EFC54572.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
          Length = 293

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY RWAE R FKTE +E  +GE AG+KS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLTRMYLRWAEARGFKTEIIEESEGEVAGLKSVTIKIIGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVNDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
 gi|212674150|gb|EEB34633.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
          Length = 366

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 167/339 (49%), Positives = 225/339 (66%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD   + QRL+ + T+   P+ W N      L+RE++ L++ ++ +  ++    
Sbjct: 15  TTFGGVFDVAASEQRLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTCHD 74

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D    LELA+E  +   L+  +     +   ++  +   LLSGE D+ DA LE+H GAGG
Sbjct: 75  DMHEWLELAVESGEDEALESLAKQQDSLDALLDETELVMLLSGEEDNQDAILEIHPGAGG 134

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDWA MLLRMYTRWA +R F  E L+   G+EAGIKS TL I GP+A+G+LK E+G+
Sbjct: 135 TESQDWAEMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGI 194

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D++ RRHTSF+S+ V P V D I+++I E+D R DT+R+SG GGQ VNTT 
Sbjct: 195 HRLIRISPFDASGRRHTSFASVDVMPDVGDDIQLDIKETDLRFDTFRSSGPGGQSVNTTS 254

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+  QCQ E+SQH NK  A  +L+A+LY LELQKRE       + K  I 
Sbjct: 255 SAVRVTHIPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIA 314

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +G QIR+Y LQPY++VKD RTN E      VLDG +D F
Sbjct: 315 FGSQIRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQF 353


>gi|82703392|ref|YP_412958.1| peptide chain release factor 2 [Nitrosospira multiformis ATCC
           25196]
 gi|82411457|gb|ABB75566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosospira
           multiformis ATCC 25196]
          Length = 310

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 160/307 (52%), Positives = 225/307 (73%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + RE++ L++ +  ++ I  +L D   L E+A EEDD + LQ  + ++  ++  V   +F
Sbjct: 1   MGREKKILESVVINLETISRQLQDARELFEMAEEEDDDATLQSVARDISHLEKAVSDMEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D+N+ ++++ +G+GGTE+QDWA ML RMY R+ E+R ++ E +E   GE AG
Sbjct: 61  RRMFSNPMDTNNCFVDIQSGSGGTEAQDWAAMLERMYLRYCERRGYQVEVMEESPGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSA+L I G  AYG+L+ E GVHRLVR SP+DS +RRHTSF+S++VYP VD++IEI+I+
Sbjct: 121 IKSASLKISGEYAYGYLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDETIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D R+DT+RASGAGGQH+N TDSAVRITH PTG+VVQCQ  RSQH+N+A A  ML+++L
Sbjct: 181 PADLRVDTFRASGAGGQHINKTDSAVRITHNPTGIVVQCQSGRSQHRNRADAMAMLKSRL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KR E     E +KT+IGWG QIRSYVL   + +KDLRT +E  +   +LDGDLD
Sbjct: 241 YEAELRKRNEEKQAIEDTKTDIGWGHQIRSYVLDQAR-IKDLRTGVESGNTQAILDGDLD 299

Query: 345 DFMKATL 351
           DF++A+L
Sbjct: 300 DFIEASL 306


>gi|295697362|ref|YP_003590600.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
 gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
          Length = 382

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 234/349 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +G   D     ++++ +  +      W +   A+ ++ E   L + +  ++ +
Sbjct: 15  LVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVNRLKDVVERVEGL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L EL  EE D ++L E    + ++  ++   + E +LSG  D N+A +E+H
Sbjct: 75  RSRVEDLEVLWELGHEEGDETVLGEIEAGITQVHSQLGQFELELMLSGPYDRNNAIVELH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW  MLLRMYTRWAE R +K E L+   GEEAG+KS TLLIKG NAYG+LK
Sbjct: 135 PGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++ RRHTSF+S+ V P +D+S++++I   D +IDTYR+SGAGGQH
Sbjct: 195 AERGVHRLVRISPFDASGRRHTSFASVDVLPELDESVDVDIRPEDLKIDTYRSSGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ KN+A A  +L A+LYE   +++EE        
Sbjct: 255 VNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYERRRREQEEQIAALRGE 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + EI WG QIRSYV  PY MVKD RT +E  +   V+DGD+D F+ A L
Sbjct: 315 QKEIAWGSQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFIDAWL 363


>gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 372

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 162/338 (47%), Positives = 234/338 (69%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D +N  +R+  L  + E P  W N   ++ +M+E   L   +    ++Q++  +  +++
Sbjct: 25  LDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQNQKEEIELMI 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+  EE+D SI+ +  + L     + E+ + ++LLSGE D ++A + +HAGAGGTES DW
Sbjct: 85  EMGYEENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNAIVTLHAGAGGTESCDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML RMY RWA+++ F TE L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRI
Sbjct: 145 ASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++  +R TSF S  V P +++ +++EI+  D RIDTYR+SGAGGQH+N T SA+RIT
Sbjct: 205 SPFNAAGKRQTSFVSCDVMPDIEEDVDVEINPDDLRIDTYRSSGAGGQHINKTSSAIRIT 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+ E+  +  +   TEIGWG QIR
Sbjct: 265 HLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGELTEIGWGNQIR 324

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV+QPY MVKD RTN E  +   V++G++D+F+ A L
Sbjct: 325 SYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYL 362


>gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [NC10 bacterium 'Dutch
           sediment']
          Length = 334

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 164/318 (51%), Positives = 226/318 (71%), Gaps = 2/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ +M+E++ L + +  +  I   L D  +LL L  EE+D   L+E   +L+ 
Sbjct: 7   FWADTSRAREIMKEQRALKDVVDQLVAIGGELDDLAVLLGLLREEEDPQALKELESSLRS 66

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +  + ++ E DS +A L ++ GAGGTESQDWA MLLRMY RWAE   +KTE 
Sbjct: 67  LEGQIGALELTTFMAEEYDSGNAILSINPGAGGTESQDWAQMLLRMYLRWAETGSYKTEI 126

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +++   EEAGIKSAT+ + G  AYG LK E GVHRLVRISP+D+N RRHTSF+S++VYP 
Sbjct: 127 IDLLPAEEAGIKSATVTVSGKYAYGRLKAEIGVHRLVRISPFDANHRRHTSFASVFVYPE 186

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I++ I + D RIDTYR+SGAGGQHVN TDSAVRITH+PT +VV CQ ERSQHKNKA
Sbjct: 187 IDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNIVVSCQNERSQHKNKA 246

Query: 275 QAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  +LRA+LY+   +++E E+A + E  K +I WG QIRSYVL PYQ+VKD RT +E +
Sbjct: 247 MAMKVLRARLYDHYRREQEKEMAKL-EGEKKDIAWGSQIRSYVLAPYQLVKDHRTGLETS 305

Query: 334 SPSDVLDGDLDDFMKATL 351
           +   VLDG+++ F+ A L
Sbjct: 306 NVDKVLDGEIEPFIDAFL 323


>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
 gi|7388057|sp|Q9X1R5|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
          Length = 369

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 168/352 (47%), Positives = 236/352 (67%), Gaps = 4/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + D   + L  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 14  ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL+  ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 74  VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 132 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 192 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++ KR EI  I +
Sbjct: 252 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEI-Q 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +I WG QIRSY+  PY MVKD RT +E  +   V+DGD+D F++A L 
Sbjct: 311 GELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELV 362


>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
 gi|238688848|sp|B1LB88|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
          Length = 367

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 168/352 (47%), Positives = 236/352 (67%), Gaps = 4/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + D   + L  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 12  ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL+  ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 72  VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++ KR EI  I +
Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEI-Q 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +I WG QIRSY+  PY MVKD RT +E  +   V+DGD+D F++A L 
Sbjct: 309 GELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELV 360


>gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CMR15]
          Length = 300

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 215/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ AGAGGTE+ 
Sbjct: 18  LFELAREEGDDDTIEAVETDTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA+L ++G  A+G+L+ E GVHRLV
Sbjct: 78  DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGEYAFGFLRTETGVHRLV 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR
Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E+SKT++GWG Q
Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 296


>gi|254284237|ref|ZP_04959205.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
 gi|219680440|gb|EED36789.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
          Length = 280

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 158/277 (57%), Positives = 205/277 (74%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  EDD   +Q  +D++  +   +E  +F  + SGE D  +A+L++ AG+GGTE+QDWA
Sbjct: 1   MAASEDDEETVQAVTDDMANLMQALEALEFRRMFSGEMDDANAFLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E R FKT  +E+  G+ AGIKSAT+  +G   +GW++ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGESRGFKTTLVEVSAGDVAGIKSATIQFEGEYPFGWIRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSF+S++V P VDD+I+IEI+ +D R+DTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFASVFVSPEVDDNIDIEINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT VV  CQ ERSQH+N+ +A   LRAKLYELE+QKR   A   E SK +IGWG QIRS
Sbjct: 181 VPTNVVASCQTERSQHQNRDRAMKQLRAKLYELEIQKRNAEAQAMEDSKADIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 241 YVLDDSR-IKDLRTGVETHNTQAVLDGDLDQFIEASL 276


>gi|28198320|ref|NP_778634.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71897686|ref|ZP_00679931.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182680959|ref|YP_001829119.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|28056390|gb|AAO28283.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71732589|gb|EAO34642.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182631069|gb|ACB91845.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|307579427|gb|ADN63396.1| peptide chain release factor 2 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 302

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 214/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L+LA  E D  +LQ   +++   +L+VE  +F+ + SG+ D  +A++++ AGAGGTE+Q
Sbjct: 11  FLDLAEIEQDQEMLQAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RWAE R +K E LE+  GE AGIKSAT  ++G  AYGWLK E GVHRLV
Sbjct: 71  DWAEMLLRMYLRWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS++RRHTSF+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSDNRRHTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VV CQ ERSQH N+ +A  ML AKLYE E+QKR    ++ E+SK++IGWG Q
Sbjct: 191 ITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YVL   + +KDLRT +E++    VLDGDLD+F++A+L
Sbjct: 251 IRNYVLDQSR-IKDLRTGVERSDTQKVLDGDLDEFIEASL 289


>gi|71892043|ref|YP_277773.1| peptide chain release factor 2 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796149|gb|AAZ40900.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 348

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 171/341 (50%), Positives = 228/341 (66%), Gaps = 6/341 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D  ++    ++ + + P +W+N   AK+L ++   L   I+ + ++   L D   L
Sbjct: 2   IFDYDLKIKHFKIISNELKSPGIWKNPKTAKILRQKSSSLKIFINIVDQLYKNLVDLNDL 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTES 130
           LEL  EE D  +L E  D  Q I LE    Q E   +  G+ D+++ Y+++ +G+GG E+
Sbjct: 62  LELT-EEYDNILLSEIHD--QSIDLERTLSQLEISRMFIGKYDNSNCYIDIQSGSGGIEA 118

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RW + + F  + +E   GE  GIKSAT+ + GP AYGWL+ E GVHRL
Sbjct: 119 QDWASMLLRMYLRWIDHKGFMADVIEESTGEVTGIKSATIQVIGPYAYGWLRTESGVHRL 178

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  +RHTSF+S++VYP +DDSI I I   D R D YRASGAGGQHVN T+SAV
Sbjct: 179 VRKSPFDSAKKRHTSFASVFVYPELDDSINIHIRPEDLRCDVYRASGAGGQHVNRTESAV 238

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +V QCQ +RSQHKNK QA   LRAKLYELELQK+     + ES+K  I WG 
Sbjct: 239 RITHIPTNIVTQCQSDRSQHKNKNQAMKQLRAKLYELELQKKNYEKKMRESNKVNITWGN 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSY+L   + VKDLRT  EK +   VL+GDLDDF++ ++
Sbjct: 299 QIRSYILDNSR-VKDLRTGFEKRNVKAVLNGDLDDFIRISI 338


>gi|27363990|ref|NP_759518.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37678852|ref|NP_933461.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|320157369|ref|YP_004189748.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
 gi|27360107|gb|AAO09045.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37197593|dbj|BAC93432.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|319932681|gb|ADV87545.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
          Length = 289

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 209/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E +D     E    L+ ++ ++   +F  + SG  DS+D Y+++ AG+GGTE+Q
Sbjct: 7   LLELAIEAEDQETFDEIGPELEALEEKLAGLEFRRMFSGAHDSSDCYIDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW +M+LRMY RWAE + FKTE +E+ +G+ AG+KS T+ I G  AYGWL+ E GVHRLV
Sbjct: 67  DWTSMMLRMYLRWAEAKGFKTEVIEVSEGDVAGLKSVTVRIIGDYAYGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSF+S +VYP +D++I+I+I+ +D RID YRASGAGGQHVNTT+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFASAFVYPEIDENIDIDINPADLRIDVYRASGAGGQHVNTTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG Q
Sbjct: 187 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 285


>gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
 gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
          Length = 368

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 172/354 (48%), Positives = 237/354 (66%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  ++  +G   D +   + +  ++ K  DP  W ++ +++ L + ++ L   +     
Sbjct: 11  KMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI +E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F  E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P ++D IE+EI   D RIDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGE 300
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L + +K+E+I ++  
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K E  WG QIRSYV QPY +VKD RTN E  +   V+DG++DDF+ A L  K
Sbjct: 311 EHK-EAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363


>gi|17545749|ref|NP_519151.1| peptide chain release factor 2 protein [Ralstonia solanacearum
           GMI1000]
 gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum GMI1000]
          Length = 300

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 215/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ AGAGGTE+ 
Sbjct: 18  LFELAREEGDDDTIEAVEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA+L ++G  A+G+L+ E GVHRLV
Sbjct: 78  DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGEYAFGFLRTETGVHRLV 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR
Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E+SKT++GWG Q
Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 296


>gi|299821880|ref|ZP_07053768.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
 gi|299817545|gb|EFI84781.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
          Length = 338

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 167/333 (50%), Positives = 228/333 (68%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP  W +   A+ ++ E   L +      +++++  +  + LEL  EE D
Sbjct: 4   RIAELEDQMLDPSFWNDQQGAQTVINEANGLKDTYQAFHQLEEQQENLEVSLELLREELD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + ++  + LQ    E++  + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  ADLKEQVEEELQTFVRELKDFELKMILSEPYDKNNAILEIHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+A+K+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+G+HRLVRISP+DS+ R
Sbjct: 124 QRFADKKGFKVEMLDYQAGDEAGIKSVTLLIKGLNAYGYLKAEKGIHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P ++D IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+TH+PTG+VV
Sbjct: 184 RHTSFVSVDVMPELNDDIEIEVRPEDLKIDTYRATGAGGQHINTTDSAVRMTHLPTGIVV 243

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+ QA  ML+ KLY+ E +++E+        + EIGWG QIRSYV  PY 
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKEQELAAIRGEQKEIGWGSQIRSYVFHPYS 303

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           MVKD RT +E  +   V+DG++DDF+ A L  K
Sbjct: 304 MVKDHRTEVETGNTQAVMDGEIDDFINAYLRSK 336


>gi|88797976|ref|ZP_01113563.1| peptide chain release factor 2 [Reinekea sp. MED297]
 gi|88779173|gb|EAR10361.1| peptide chain release factor 2 [Reinekea sp. MED297]
          Length = 280

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/277 (57%), Positives = 211/277 (76%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+EEDD   + + S+ L  ++ ++E  +F  + SGE D ++AYL++ AG+GGTE+QDWA
Sbjct: 1   MAVEEDDEGSVADVSEELAGLQRQLEELEFRRMFSGEMDPSNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E++ FKTE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGEEKGFKTELMEASAGDVAGIKSATVRFEGEYAFGWLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFSS++V P +DD++EIEI+ +D RID YRASGAGGQHVN T+SAVRITH
Sbjct: 121 PFDSGNRRHTSFSSVFVSPEIDDNVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+V QCQ +RSQHKNK QA   L+AKLYE E+ +R+E A + E +K++IGWG QIRS
Sbjct: 181 EPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEREMLQRQEAAQLVEDNKSDIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 241 YVLDDAR-IKDLRTGVENRNTQAVLDGALDPFIEASL 276


>gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 357

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 169/343 (49%), Positives = 219/343 (63%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG FD D   + +     +  +P  W +   A+ ++ E   L       K++ D + D
Sbjct: 5   TLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGD 64

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +  EL  EE D  +  E   + Q  + +++  +   LL G  D N+A LE+H GAGGT
Sbjct: 65  LAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGT 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDW  MLLRMYTRWA    FK E ++   G+EAGIKS TLLI G NAYG+L+ E+GVH
Sbjct: 125 ESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+  RRHTSF+S+ V P +DD+++++I   D +ID YRASGAGGQHVN T S
Sbjct: 185 RLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV  Q +RSQ +N+  A NMLRAKLYE E +K+ +     +  + +IGW
Sbjct: 245 AVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGW 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYV  PY MVKD RTN E      V+DGDLD FM A L
Sbjct: 305 GSQIRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYL 347


>gi|262401638|ref|ZP_06078204.1| peptide chain release factor 2 [Vibrio sp. RC586]
 gi|262352055|gb|EEZ01185.1| peptide chain release factor 2 [Vibrio sp. RC586]
          Length = 289

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 164/280 (58%), Positives = 212/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E +D     E    L+ ++ ++E  +F  + SG+ D++D YL++ AG+GGTE+Q
Sbjct: 7   LLELAIEAEDQETFDEIGPELEELEAKLEQLEFRRMFSGDHDASDCYLDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 67  DWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E SK++IGWG Q
Sbjct: 187 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDSKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 285


>gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
 gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
          Length = 370

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 163/349 (46%), Positives = 234/349 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L  + G  D     +R+  L  +   P  W +   A+  + E   + + +  + ++
Sbjct: 16  MAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNAIKSLVETMAKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D  ++LEL +EE D S++ +  D+ Q ++   E  + E LLS E D N+A LE+H
Sbjct: 76  DSQYEDLQVMLELVIEEGDSSLIPDLYDSTQELRKSFESFELELLLSDEYDKNNAILELH 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW + + FK E L+   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 136 PGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVTLLIKGYNAYGYLK 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++ RRHTSF S  V P ++D   ++I   D ++DTYR+SGAGGQH
Sbjct: 196 SEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNVVDIRTEDLKVDTYRSSGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+P+G+VV CQ ERSQ KN+ +A  ML A+L+E + +++E+     +  
Sbjct: 256 INTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKKREEQEKTLAAIQGE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +I WG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L
Sbjct: 316 QKDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFIDAYL 364


>gi|28377601|ref|NP_784493.1| peptide chain release factor 2 [Lactobacillus plantarum WCFS1]
 gi|38258340|sp|Q88YL5|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28270434|emb|CAD63336.1| peptide chain release factor 2, C-terminal fragment [Lactobacillus
           plantarum WCFS1]
          Length = 357

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 169/343 (49%), Positives = 219/343 (63%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG FD D   + +     +  +P  W +   A+ ++ E   L       K++ D + D
Sbjct: 5   TLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGD 64

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +  EL  EE D  +  E   + Q  + +++  +   LL G  D N+A LE+H GAGGT
Sbjct: 65  LAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGT 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDW  MLLRMYTRWA    FK E ++   G+EAGIKS TLLI G NAYG+L+ E+GVH
Sbjct: 125 ESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+  RRHTSF+S+ V P +DD+++++I   D +ID YRASGAGGQHVN T S
Sbjct: 185 RLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV  Q +RSQ +N+  A NMLRAKLYE E +K+ +     +  + +IGW
Sbjct: 245 AVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGW 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYV  PY MVKD RTN E      V+DGDLD FM A L
Sbjct: 305 GSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYL 347


>gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26]
 gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291]
 gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291]
          Length = 338

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 164/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ ++   +++ 
Sbjct: 16  FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIEKSIES 75

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + 
Sbjct: 76  MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 135

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P 
Sbjct: 136 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 195

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK 
Sbjct: 196 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 255

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           +A  +L AKL EL EL+++E+I +I +   ++I WG QIRSYV QPY++VKD RTN E  
Sbjct: 256 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 314

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
           +   V++G++D F+   L + K
Sbjct: 315 NVDSVMNGNIDLFINEYLKMNK 336


>gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932]
 gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42]
 gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255]
 gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55]
 gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34]
 gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79]
 gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58]
          Length = 339

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 164/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ ++   +++ 
Sbjct: 17  FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIEKSIES 76

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + 
Sbjct: 77  MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 136

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P 
Sbjct: 137 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 196

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK 
Sbjct: 197 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 256

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           +A  +L AKL EL EL+++E+I +I +   ++I WG QIRSYV QPY++VKD RTN E  
Sbjct: 257 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 315

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
           +   V++G++D F+   L + K
Sbjct: 316 NVDSVMNGNIDLFINEYLKMNK 337


>gi|149924687|ref|ZP_01913037.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
 gi|149814444|gb|EDM74035.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
          Length = 354

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 169/350 (48%), Positives = 230/350 (65%), Gaps = 3/350 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++C GG+FD+    +RL      T DP  W++   A+ ++RE+  L   +  I ++Q  +
Sbjct: 1   MSC-GGIFDYAGKRERLEEYEIATGDPSFWEDNERAQKILREQSTLKKLVEQIDDVQQTI 59

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L EL  EE D   + E  +NL +    +   +F  +LSG  D + A L ++AGAG
Sbjct: 60  DDGRELYELGREESDTESIVEAWENLGQADALLGKLEFRRMLSGTHDEDSALLSINAGAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G +SQDWA MLLRMY RW E++ F  + L+I +G++AGI+ A L I+G  AYGWL+ E G
Sbjct: 120 GVDSQDWAEMLLRMYQRWGERQGFDVKVLDIQEGDQAGIRGADLAIEGDYAYGWLRSEIG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS--IEIEISESDCRIDTYRASGAGGQHVN 244
           VHRLVRISP+DS +RR TSF+SI V P + D    EIE++ +D R+D YRASGAGGQHVN
Sbjct: 180 VHRLVRISPFDSQARRQTSFASIMVLPDLGDGKDFEIEVNPADLRVDKYRASGAGGQHVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+TH PTG+VV CQ ERSQHKN A A  ML+AKL++LE Q+R +  +  E  K 
Sbjct: 240 KTESAVRLTHEPTGIVVACQMERSQHKNMATAMRMLKAKLWDLEQQRRSDEISALEGDKK 299

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            I WG QIRSYV+ PYQ V D RT +++ +   VLDGDL  +M+A L ++
Sbjct: 300 AIEWGSQIRSYVIHPYQQVNDHRTELKQGNVDAVLDGDLGSYMEAFLLMQ 349


>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
 gi|166225119|sp|A5IM04|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
           petrophila RKU-1]
          Length = 367

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 232/338 (68%), Gaps = 5/338 (1%)

Query: 17  DNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +N V R +  +  K  DP +W +  +A+   ++ + L N    +K ++    D  + +EL
Sbjct: 26  ENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIEL 85

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +  ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL VH GAGGTESQDWA 
Sbjct: 86  S--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQ 143

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+LK E GVHRLVRISP
Sbjct: 144 MLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISP 203

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ+VN T+SAVRITH+
Sbjct: 204 FDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 263

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRS 314
           PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++K++ EI  I +    +I WG QIRS
Sbjct: 264 PTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEI-QGELKDISWGNQIRS 322

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YV  PY MVKD RT +E  +   V+DGD+D F++A L 
Sbjct: 323 YVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELV 360


>gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826]
 gi|166223623|sp|A7ZE19|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826]
          Length = 366

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 171/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  ++  +G +   D+   RL  +    +DP  WQ++  A  L +E+  + N ++   +
Sbjct: 12  KLQTKVENIGSIVKPDDIKARLKEIEAIEQDPDFWQDIARAGALNKEKTKISNMLAKFSD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               + D   L ELA  E+D   +    ++ + +  ++   +   LLSGE D  +A + +
Sbjct: 72  ANQAVSDAKELFELANSENDEETINSLFEDAKNLDEKIVNLEISMLLSGEDDGKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAYG+ 
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGENAYGYF 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P VDD IEIEI E D +IDTYRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VVQCQ +RSQHKN+A A  ML+++LYELEL K++E +N  E 
Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKMIEGVLIAQK 363


>gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
 gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
          Length = 343

 Score =  333 bits (853), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 169/332 (50%), Positives = 223/332 (67%), Gaps = 2/332 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + +S    K  +P  W +  +A+ ++ E   L       K + D + +  + LEL   E 
Sbjct: 3   ESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLEMEA 62

Query: 81  DCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           D  +  E  D L Q  KL  +Y+    LL+G+ D+N+A LE+H GAGGTESQDW +MLLR
Sbjct: 63  DPDVQAEFEDELSQTAKLLRDYR-LGLLLNGKYDANNAILEIHPGAGGTESQDWGSMLLR 121

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTRWAE+ +FK +  +   GE AGI S T+ + G NAYG+L+ E+GVHRLVR+SP+DS 
Sbjct: 122 MYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVRLSPFDSA 181

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            RRHTSF+S+ V P +DDS+E+ I+  D R+D YR+SGAGGQH+N T SAVRITH+PTG+
Sbjct: 182 GRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGI 241

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VV  Q ERSQ +N+  A NML+AKL+ELE QK+ E     E ++ EIGWG QIRSYV  P
Sbjct: 242 VVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHP 301

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y MVKD RTN+E  +   V+DGDLDDF+ A L
Sbjct: 302 YSMVKDHRTNLETANVQGVMDGDLDDFINAYL 333


>gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 [Clostridium difficile 630]
 gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile]
          Length = 328

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 164/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ ++   +++ 
Sbjct: 6   FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIEKSIES 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + 
Sbjct: 66  MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P 
Sbjct: 126 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK 
Sbjct: 186 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 245

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           +A  +L AKL EL EL+++E+I +I +   ++I WG QIRSYV QPY++VKD RTN E  
Sbjct: 246 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 304

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
           +   V++G++D F+   L + K
Sbjct: 305 NVDSVMNGNIDLFINEYLKMNK 326


>gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
 gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
          Length = 361

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 164/347 (47%), Positives = 231/347 (66%), Gaps = 2/347 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L+ +GGLFD D   + ++    +  +P  W +  +A  ++++   L +      +++  
Sbjct: 3   KLSAIGGLFDLDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMELA 62

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             +  +L E+  EE D  +  E  + +Q ++ +++  +   LL+G  D N A LE+H GA
Sbjct: 63  HEETSLLFEMYKEEPDEEVHAEIVEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPGA 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDW +MLLRMY RWAEK  ++ E ++  DG+EAGIKS TL I+G NAYG+L+ E+
Sbjct: 123 GGTESQDWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSEK 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+D+  +RHTSF S+ V P +D  I+IEI+  D ++D YRASGAGGQH+N 
Sbjct: 183 GVHRLVRISPFDAAGKRHTSFCSVDVVPQMDGDIDIEINPDDLKVDVYRASGAGGQHINK 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKT 304
           T SAVRITHIPTG+V Q Q +RSQ KN+ QA  ML+AKL++LE +K+  E+A I    + 
Sbjct: 243 TSSAVRITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAI-RGEQK 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +I WG QIR+YV  PY MVKDLR+  E  +   V+DGDLD FM A L
Sbjct: 302 DIAWGSQIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYL 348


>gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
 gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
          Length = 320

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 223/317 (70%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L   +  I +++  + D   LLELA+E  D     E    L+ 
Sbjct: 1   MWNEPERAQALGKERSSLQAVVETINQLEQGVDDVEGLLELAIEAQDQETFDEVLPELEE 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ D+   Y+++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE 
Sbjct: 61  LEAKLAQLEFRRMFSGDHDAAHCYIDLQAGSGGTEAQDWTSMLLRMYLRWADDKGFKTEV 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP 
Sbjct: 121 IEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I ++I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 181 IDENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDKFIEASL 316


>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           18P13]
          Length = 375

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 163/347 (46%), Positives = 236/347 (68%), Gaps = 2/347 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           QL  LG +     A   L  L  +      W +  +++ +M++ + L+N +   + +  +
Sbjct: 17  QLKELGDVLQVARAQSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLNQK 76

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D + L++L +EEDD S  +E   +++  K E+E ++  +LL+GE D ++A L  HAGA
Sbjct: 77  LEDTIALIDLCMEEDDDSSNEEILQDVESFKEELEAEKLSTLLTGEYDGSNAILTFHAGA 136

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA ML RMY RWAE+  FK   L+  DG+EAG+KSA++L++G NAYG+LK E 
Sbjct: 137 GGTEAQDWAQMLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKSEA 196

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SP+D++ RRHTSF+++ V P +DDS+E++I   D ++D +R+SGAGGQH+N 
Sbjct: 197 GVHRLVRVSPFDASGRRHTSFAALEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHINK 256

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKT 304
           T SAVR+THIPTG+VV CQ +RSQ +N+  A  MLR+KL E+ E +  E+I++I +  + 
Sbjct: 257 TSSAVRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDI-KGVQK 315

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           EI WG QIRSYV  PY + KD RT  E  + S V+DGDLD F+ A L
Sbjct: 316 EIAWGAQIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYL 362


>gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
 gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
          Length = 348

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 171/346 (49%), Positives = 235/346 (67%), Gaps = 4/346 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D+   ++  +  KT +P  W N   ++  ++E   L   I   ++I     D  
Sbjct: 5   GGIFDLDSLNLKIERIEKKTAEPDFW-NRENSQETLKELNILKKLIEEYEKISGMNEDVS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +++E  +E  D S  +E  D +  +  E++  + + LL  + DSN+A L ++AGAGGTE+
Sbjct: 64  VMIEF-IEAGDDSFEKELDDKIDTVTEEIQNFKTKLLLDEKYDSNNAILTINAGAGGTEA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  ML RMY RW+ ++ FK E L+   GEEAGIKS TL IKG  AYG+LKGE+GVHRL
Sbjct: 123 CDWTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLKGEKGVHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN +RHTSF+++ V P +DD +E+ I   D ++DTYRASGAGGQHVNTTDSAV
Sbjct: 183 VRISPFDSNGKRHTSFTAVNVVPEIDDDVEVNIRPEDLKVDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITHIPT  VV CQ+ERSQ KNK  A  +L+++L+E+EL+KRE E+ NI + ++++I WG
Sbjct: 243 RITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENI-KGTESKIEWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 302 SQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKFYK 347


>gi|224499863|ref|ZP_03668212.1| peptide chain release factor 2 [Listeria monocytogenes Finland
           1988]
 gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
 gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
          Length = 338

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 170/330 (51%), Positives = 220/330 (66%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  EE D
Sbjct: 4   RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  EDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R
Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV
Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY 
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333


>gi|270157123|ref|ZP_06185780.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|289164472|ref|YP_003454610.1| peptide chain release factor 2 [Legionella longbeachae NSW150]
 gi|269989148|gb|EEZ95402.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|288857645|emb|CBJ11485.1| putative peptide chain release factor 2 [Legionella longbeachae
           NSW150]
          Length = 336

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 229/321 (71%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E   +W N   A+ L RE+  L+  +S + ++   + D   L E+A EE D   + E S+
Sbjct: 9   ESSTIWDNPEVAQALGREQTQLEALVSTLTQLGQSITDLNELFEMAREESDEQTINEISE 68

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            LQ ++ +V   +F  + SG+ D ++AYL++ +G+GGTE+QDWA MLLRMY RW E+  F
Sbjct: 69  ELQTVEKKVADLEFRRMFSGKMDDSNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEQHGF 128

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++
Sbjct: 129 TTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH
Sbjct: 189 VSPEIDDDIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQCQTDRSQH 248

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL   + +KDLRT +
Sbjct: 249 RNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   VLDG LD F++A+L
Sbjct: 308 ETSNTQAVLDGALDQFIEASL 328


>gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
 gi|238686699|sp|A7I0P7|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
          Length = 364

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 160/330 (48%), Positives = 221/330 (66%), Gaps = 2/330 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ +    +DP LW +  +A  + RE+  + N ++  K+ Q+ L D     ELA+ E+D
Sbjct: 32  RLAEIEKTEQDPALWVDAKKAAQIGREKTKISNILAKFKKAQNELNDAKEFYELAVSEND 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              + E      ++   +   +   +LSGE D  +A + +H GAGGTE +DWA ML RMY
Sbjct: 92  GETINELFRESAKLSENIANLELSMMLSGENDDKNAIINIHPGAGGTEGEDWAGMLYRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+ E+  +K E L+  +G+EAGIK    ++KG NAYG+LK E G+HRLVRISP+DS  R
Sbjct: 152 VRFCERVGYKIEILDFQEGDEAGIKDVNFIVKGENAYGYLKVESGIHRLVRISPFDSAGR 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ V P +DD I+I I E D RID YR+SGAGGQHVN T+SAVRITHIPT +VV
Sbjct: 212 RHTSFASVVVSPELDDDIQINIDEKDLRIDYYRSSGAGGQHVNKTESAVRITHIPTNIVV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ +R QHKNKA A  +L+++LYELE  K++E +N  ++ K++I WG QIR+YVL PYQ
Sbjct: 272 QCQNDRDQHKNKASAMKVLKSRLYELEKLKKQEESN--KTPKSDIAWGYQIRNYVLFPYQ 329

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            VKDLR+NI  +    +LDGD+   ++  L
Sbjct: 330 QVKDLRSNIAYSQAEAILDGDIKKILEDVL 359


>gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 327

 Score =  332 bits (851), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 168/323 (52%), Positives = 218/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E   + + ++  K++ D   +  +  +L  EE D  +  E    
Sbjct: 3   DPEFWNDQQKAQTVINEANGIKDYVNSYKKLNDSHEELQMTHDLLKEEPDSDLQLELEKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK
Sbjct: 63  LKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ A L  K
Sbjct: 303 MGNVQAVMDGDIDTFIDAYLRSK 325


>gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 368

 Score =  332 bits (851), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 171/354 (48%), Positives = 237/354 (66%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  ++  +G   D +   + +  ++ +  DP  W ++ +++ L + ++ L   +     
Sbjct: 11  KMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI +E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F  E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P ++D IE+EI   D RIDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGE 300
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L + +K+E+I ++  
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K E  WG QIRSYV QPY +VKD RTN E  +   V+DG++DDF+ A L  K
Sbjct: 311 EHK-EAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363


>gi|307297404|ref|ZP_07577210.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916664|gb|EFN47046.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 370

 Score =  332 bits (851), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 165/352 (46%), Positives = 237/352 (67%), Gaps = 6/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + + +    D +   ++L  +  +  DP +W +  EA  L RE Q   + I  +++
Sbjct: 12  ELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYRSTIELLRD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++      I +EL+ E  D S ++   + ++  + +V   +   LLSGE D N+ ++ +
Sbjct: 72  VEEEFESIEIAVELSGE--DESYVKHVEELVRSAEKKVREFELTILLSGEYDINNCFISI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+ML+RMY RWAE  +FK   ++   GEEAGIKS T+ + GP+AYG +
Sbjct: 130 HPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPHAYGKM 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+S+ V+P +D+  EIEI   D +IDTYR+ GAGGQ
Sbjct: 190 KFEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDEVPEIEIRPEDLKIDTYRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIG 299
           HVN TDSAVRITH+PTG+VV CQ ERSQH+NKA A  ML AKL+E+E++K+  E++  +G
Sbjct: 250 HVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSEKLKLMG 309

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  + EI WG QIRSYV QPY +VKD RT+ E      V++G++D+F++  L
Sbjct: 310 D--QKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIEKEL 359


>gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987]
 gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus ATCC 10987]
          Length = 380

 Score =  332 bits (851), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 228/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G  D     ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99]
          Length = 338

 Score =  332 bits (851), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 170/330 (51%), Positives = 220/330 (66%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  EE D
Sbjct: 4   RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R
Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV
Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY 
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333


>gi|146283094|ref|YP_001173247.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|145571299|gb|ABP80405.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 270

 Score =  332 bits (850), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 157/260 (60%), Positives = 201/260 (77%), Gaps = 1/260 (0%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++R++  +E  +F  + S E D N+ YL++ AG+GGTE+QDWAN+LLRMY RWA+KR F 
Sbjct: 8   VERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFS 67

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V
Sbjct: 68  AEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFV 127

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH 
Sbjct: 128 SPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHA 187

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL   + +KDLRT +E
Sbjct: 188 NKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVE 246

Query: 332 KTSPSDVLDGDLDDFMKATL 351
           ++    VLDGDLD +++A+L
Sbjct: 247 RSDCQKVLDGDLDGYLEASL 266


>gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. 'Ames Ancestor']
          Length = 365

 Score =  332 bits (850), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G  D     ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 12  KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 72  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 361


>gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 313

 Score =  332 bits (850), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 166/300 (55%), Positives = 217/300 (72%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  +  I ++   L D   LLELA  E D         +L   +  VE  +F+ + SG+
Sbjct: 2   LEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNYQAHVEKLEFQRMFSGQ 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ 
Sbjct: 62  MDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D
Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QK
Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R    +  E++K++IGWG QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 242 RNAEKDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 300


>gi|296272007|ref|YP_003654638.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
 gi|296096182|gb|ADG92132.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
          Length = 364

 Score =  332 bits (850), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 159/317 (50%), Positives = 219/317 (69%), Gaps = 2/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V  A  +  E+  + + +S  K+  + L     L E+ALEE D    +      + 
Sbjct: 45  FWNDVETATKIGIEKNRILSKLSKFKKANESLSGTNELYEMALEEKDEDTFELLHGEAEE 104

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +   +   +LS   DS++A + +H GAGGTESQDWA+ML RMY RWAE+  FK E 
Sbjct: 105 LDNLIRSTEISVMLSNPDDSSNAIISIHPGAGGTESQDWASMLYRMYLRWAERMDFKIEV 164

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+  DGEEAG+K  + +IKG NAYG+LK E G+HRLVRISP+DSN++RHTSF+S+ V P 
Sbjct: 165 LDYQDGEEAGLKDVSFIIKGENAYGYLKAENGIHRLVRISPFDSNAKRHTSFASVMVSPE 224

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+I+I + + D RIDTYR+SGAGGQHVN T+SA+RITHI T +VVQCQ +RSQHKNKA
Sbjct: 225 IDDNIDIVVEDKDIRIDTYRSSGAGGQHVNKTESAIRITHIATNIVVQCQNDRSQHKNKA 284

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+++LYE EL+K++ + +  E  K+EIGWG QIRSYV+QPYQ +KD R+NI  ++
Sbjct: 285 SAMKMLKSRLYEYELEKQQAVKDGVE--KSEIGWGHQIRSYVMQPYQQIKDTRSNIGYSN 342

Query: 335 PSDVLDGDLDDFMKATL 351
              +LDGD+   ++  L
Sbjct: 343 VEAILDGDITKMIEDVL 359


>gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 372

 Score =  331 bits (849), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 233/338 (68%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D     L +L ++T +P  WQ++  ++ ++++ + L + I   +++  +  D  +L 
Sbjct: 25  LDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLCSQWEDLKVLT 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL++EE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HAGAGGTE+QDW
Sbjct: 85  ELSIEEGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI
Sbjct: 145 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHVN T+SAVRI 
Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +T+IGWG QIR
Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTDIGWGNQIR 324

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV  PY +VKD RT  E  +   V+DG++D F+ A L
Sbjct: 325 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362


>gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
 gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
          Length = 333

 Score =  331 bits (849), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 166/321 (51%), Positives = 219/321 (68%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P  W +   A+  M+E   L + +   ++++ +  D  +L EL  EE+D  IL E   
Sbjct: 3   QEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEIEA 62

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +Q I  E++    E LL+G  D N+A L +HAGAGGTE+ DW  MLLRMY RW EKR +
Sbjct: 63  GIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKRGY 122

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+   G+EAGIKSATL + G NAYG+LKGE GVHRLVRISP+DS+ RRHTSF+S+ 
Sbjct: 123 KVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFASLE 182

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P V D  EI+I   D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VV CQ ERSQ 
Sbjct: 183 VLPEVSDGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+A A  ML+AKL+E + Q++E   N  +  + +I +G QIRSYV  PY +VKD RTN 
Sbjct: 243 QNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVKDHRTNT 302

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG+LD+F+ A L
Sbjct: 303 EVGNVHAVMDGELDEFISAYL 323


>gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
 gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
          Length = 338

 Score =  331 bits (849), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 163/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ +++E + L   +   + ++  L D  +L+E+ LEE+D S+ ++   +++ 
Sbjct: 16  FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVERDIEKSIES 75

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + 
Sbjct: 76  MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 135

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P 
Sbjct: 136 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 195

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK 
Sbjct: 196 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 255

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           +A  +L AKL EL EL+++E+I +I +   ++I WG QIRSYV QPY++VKD RTN E  
Sbjct: 256 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 314

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
           +   V++G++D F+   L + K
Sbjct: 315 NVDSVMNGNIDLFINEYLKMNK 336


>gi|62259280|gb|AAX77849.1| unknown protein [synthetic construct]
          Length = 360

 Score =  331 bits (849), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 171/327 (52%), Positives = 231/327 (70%), Gaps = 3/327 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  + ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E+   S+
Sbjct: 24  MLEMELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESL 81

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           +QE + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RW
Sbjct: 82  MQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRW 141

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+   FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHT
Sbjct: 142 ADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHT 201

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q
Sbjct: 202 SFASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQ 261

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            +RSQHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +K
Sbjct: 262 SDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IK 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           DLRT +E T+   VLDGDLD F++A+L
Sbjct: 321 DLRTGVENTNTQAVLDGDLDKFIEASL 347


>gi|313683376|ref|YP_004061114.1| bacterial peptide chain release factor 2 (brf-2) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313156236|gb|ADR34914.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 369

 Score =  331 bits (849), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 175/349 (50%), Positives = 240/349 (68%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+        RLS +         W +   A ++ +E+  L+  ++   + 
Sbjct: 13  LTTKMQNVTGVVRPQEISARLSEIEALENSDGFWNDAAAAGVIQKEKTQLERRLAKYSKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D + L E+A EE D   ++    +   ++  V+  + E LLSGE DS++A + +H
Sbjct: 73  FNTLGDAVDLYEMAKEEGDEETIESLFADAGSLENNVKSMEVEVLLSGEHDSHNAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRWAE+  F  E L+   GEEAGIK A LLIKG N YG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYTRWAERHDFTVEMLDYQAGEEAGIKDAALLIKGVNVYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISPYDS ++RHTSF+S+ V P +DD I+I+I + D RIDTYRASGAGGQH
Sbjct: 193 NENGIHRLVRISPYDSAAKRHTSFTSVMVSPELDDDIDIDIEDRDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELE++K++  A +    
Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELEMEKKQ--AAVDGIE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+E GWG QIRSYVL PYQ VKD R+ I  ++ S++LDGD+D+ ++  L
Sbjct: 311 KSENGWGHQIRSYVLAPYQQVKDTRSGIPYSNISNILDGDIDEMIEGVL 359


>gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 370

 Score =  331 bits (849), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 231/338 (68%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D     L  L ++T  P  WQ++  ++ ++++ + L + I   +++  +  D  +L 
Sbjct: 23  LDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDLKVLT 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL+LEE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HAGAGGTE+QDW
Sbjct: 83  ELSLEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI
Sbjct: 143 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHVN T+SAVRI 
Sbjct: 203 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +TEIGWG QIR
Sbjct: 263 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV  PY +VKD RT  E  +   V+DG++D F+ A L
Sbjct: 323 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 360


>gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
 gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
          Length = 327

 Score =  331 bits (849), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 168/323 (52%), Positives = 218/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E    
Sbjct: 3   DPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELEKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK
Sbjct: 63  LKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ A L  K
Sbjct: 303 MGNVQAVMDGDIDTFIDAYLRSK 325


>gi|56707356|ref|YP_169252.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669826|ref|YP_666383.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456424|ref|ZP_03664897.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370940|ref|ZP_04986945.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874190|ref|ZP_05246900.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|54112809|gb|AAV29038.1| NT02FT0149 [synthetic construct]
 gi|56603848|emb|CAG44824.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320159|emb|CAL08207.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569183|gb|EDN34837.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840189|gb|EET18625.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 325

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63]
          Length = 339

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 163/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ +++E + L   +   + ++  L D  +L+E+ LEE+D S+ ++   +++ 
Sbjct: 17  FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVERDIEKSIES 76

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + 
Sbjct: 77  MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 136

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P 
Sbjct: 137 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 196

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK 
Sbjct: 197 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 256

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           +A  +L AKL EL EL+++E+I +I +   ++I WG QIRSYV QPY++VKD RTN E  
Sbjct: 257 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 315

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
           +   V++G++D F+   L + K
Sbjct: 316 NVDSVMNGNIDLFINEYLKMNK 337


>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
 gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 343

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 166/332 (50%), Positives = 223/332 (67%), Gaps = 2/332 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + +S    K  +P+ W N  +A++++ E   L       K + D + +  +  EL   ED
Sbjct: 3   ESISVNEAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMED 62

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  +  E    L      ++  +   LL+G+ D+N+A +E+H GAGGTESQDW +MLLRM
Sbjct: 63  DPDVQSEFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLLRM 122

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTRWAE+ +FK +  +   GE AGI S T+ I G NAYG+L+ E+GVHRLVR+SP+DS  
Sbjct: 123 YTRWAEQHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDSAG 182

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P +DDS+E+ I++ D R+D YR+SGAGGQH+N T SAVRITH+PTG+V
Sbjct: 183 RRHTSFASVDVMPELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIV 242

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319
           V  Q ERSQ +N+A A +ML+AKL+ELE QK+ EE A I E  + EIGWG QIRSYV  P
Sbjct: 243 VASQAERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKI-EGIQLEIGWGSQIRSYVFHP 301

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y MVKD R+N E  +   V+DGD DDF+ A L
Sbjct: 302 YSMVKDHRSNFETANVQGVMDGDFDDFINAYL 333


>gi|241667458|ref|ZP_04755036.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876005|ref|ZP_05248715.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842026|gb|EET20440.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 325

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|237729831|ref|ZP_04560312.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
 gi|226908437|gb|EEH94355.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
          Length = 310

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 171/307 (55%), Positives = 218/307 (71%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  + ++   L D   LLELA+E DD     E    L  ++ ++   +F
Sbjct: 1   MGKERSSLEAIVDTLDQMSQGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AG
Sbjct: 61  RRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+
Sbjct: 121 IKSVTIRIAGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD
Sbjct: 241 YELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLD 299

Query: 345 DFMKATL 351
            F++A+L
Sbjct: 300 QFIEASL 306


>gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8]
          Length = 300

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 156/286 (54%), Positives = 215/286 (75%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D+  L ELA  +DD + L+    +    + ++E  +F  + S  AD  + +L++ AGA
Sbjct: 12  LADSNELFELAASDDDDATLESIEQDADAFQEKLEALEFRRMFSNPADPLNCFLDIQAGA 71

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLR Y ++AE++ FK E LE  DG+ AG+KSAT+ I+G  A+G+L+ E 
Sbjct: 72  GGTEAQDWASMLLRQYLKYAERKGFKAEVLEESDGDVAGLKSATIKIEGEYAFGYLRTET 131

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+N 
Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINK 191

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT+
Sbjct: 192 TDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTD 251

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 252 VGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 296


>gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
 gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
          Length = 313

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 161/306 (52%), Positives = 218/306 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L + +  + ++     D  +L+E+A +E+D S+L E    L   +   E  + +
Sbjct: 1   MKELKSLKDFLEKVSQLTTSYEDIGVLIEMAYDENDESLLPEIESELTAFQQGYEEIRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D ++A + +HAGAGGTES DWANML RMYTRWAE++ F  E L+  DG+ AG+
Sbjct: 61  TLLSGEYDKDNAIVTLHAGAGGTESCDWANMLYRMYTRWAERKGFSVEVLDFLDGDVAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IE+++
Sbjct: 121 KAVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDDIDIELND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITHIPTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVVQCQNERSQHNNKEKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY +VKD RTN+E  + S VLDG++D 
Sbjct: 241 LLKEQEQAEKVSDIRGEIKEIGFGNQIRSYVMQPYTLVKDHRTNVESGNVSSVLDGNIDL 300

Query: 346 FMKATL 351
           FM A L
Sbjct: 301 FMNAYL 306


>gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
 gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
          Length = 300

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 157/280 (56%), Positives = 214/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ AGAGGTE+ 
Sbjct: 18  LFELAREEGDDDTIEAIETDTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSA++ ++G  A+G+L+ E GVHRLV
Sbjct: 78  DWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR
Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E+SKT++GWG Q
Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIQASL 296


>gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 329

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 167/322 (51%), Positives = 224/322 (69%), Gaps = 2/322 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA--LEEDDCSILQETSD 90
           P+ W N  +A+ +M +       +    +I+D + DN  L++L    +ED+   L+E   
Sbjct: 3   PNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEVDS 62

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           NL++IK  +   + ++ L+GE D N+AYL ++AGAGG E+ DWA+ML RMYTR+ EKR F
Sbjct: 63  NLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKRGF 122

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E  ++++ E  GIKS TL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHTSFSS+ 
Sbjct: 123 KVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSSVD 182

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +D+   IEI  SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV   Q ERSQ 
Sbjct: 183 VFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQM 242

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+  A N+L +KL +++ ++++E     + S ++I WG QIRSYV QPY MVKD RTN 
Sbjct: 243 QNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWGSQIRSYVFQPYTMVKDHRTNY 302

Query: 331 EKTSPSDVLDGDLDDFMKATLA 352
           E  +   V+DGD+  F+ A LA
Sbjct: 303 EMGNVEAVMDGDIQGFIDAYLA 324


>gi|319427481|gb|ADV55555.1| peptide chain release factor 2, PrfB [Shewanella putrefaciens 200]
          Length = 365

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 234/350 (66%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G  D+D   +RL  +  + E   +W     A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGYLDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K++IGWG QIRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 313 AKSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 361


>gi|300692007|ref|YP_003753002.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
 gi|299079067|emb|CBJ51729.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
          Length = 300

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 157/280 (56%), Positives = 215/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ AGAGGTE+ 
Sbjct: 18  LFELAREEGDDDTVEAVEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G  A+G+L+ E GVHRLV
Sbjct: 78  DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR
Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E+SKT++GWG Q
Sbjct: 198 ITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDTFIEASL 296


>gi|288554120|ref|YP_003426055.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
 gi|288545280|gb|ADC49163.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
          Length = 328

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 169/320 (52%), Positives = 225/320 (70%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ ++ E   L   ++   E++++  +  +  EL  EE D  + +E    +
Sbjct: 4   PDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYELVKEEADEELEKELEAGV 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           + +   +   + + LLS   D N+A LE+H GAGGTESQDWA+MLLRMYTRW+E+R FK 
Sbjct: 64  KELISRLNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWSEQRGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V 
Sbjct: 124 ETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD++EI+I   D ++DTYRASGAGGQH+NTTDSA+RITH+PT  VV CQ ERSQ KN
Sbjct: 184 PELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRITHLPTNTVVTCQSERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           + QA  ML+AKLY+LE++K ++E+A I    + EIGWG QIRSYV  PY +VKD RTN E
Sbjct: 244 RDQAMKMLKAKLYQLEIEKQQQELAEI-RGEQKEIGWGSQIRSYVFHPYSLVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             + + V+DGDLD F+ A L
Sbjct: 303 IGNTNAVMDGDLDGFINAYL 322


>gi|328675334|gb|AEB28009.1| Peptide chain release factor 2 [Francisella cf. novicida 3523]
          Length = 325

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLELA E+   +++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEED--ETLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|118496781|ref|YP_897831.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida U112]
 gi|194324538|ref|ZP_03058310.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
 gi|118422687|gb|ABK89077.1| peptide chain release factor 2 [Francisella novicida U112]
 gi|194321373|gb|EDX18859.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
          Length = 325

 Score =  331 bits (848), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 172/321 (53%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + VKDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-VKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|254372144|ref|ZP_04987636.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569874|gb|EDN35528.1| peptide chain release factor 2 [Francisella novicida GA99-3549]
          Length = 325

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 228/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLNELLELGEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K     I DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
 gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
          Length = 378

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 166/318 (52%), Positives = 217/318 (68%), Gaps = 1/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W+N  +A+ +M + + L N I   +++   + D   L EL +E  D S+  E      +
Sbjct: 44  FWENPAKAEKVMTDIKQLKNRIEPWRDLIAAVDDAEALYELGMESGDESLEAELKAAYDQ 103

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            + E +     +LLSGE D N A+L +HAGAGGTE+ DWA ML RMY RWAE+R FK E 
Sbjct: 104 AQAEYDRLSILNLLSGEVDRNGAFLTIHAGAGGTEACDWAQMLCRMYVRWAERRGFKVET 163

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +++ + E  GIKS TL I G  AYG+LK E G+HRLVRISP+DSN+RRHTSFSS++V+PV
Sbjct: 164 VDMLEAE-GGIKSVTLQISGEYAYGYLKSEAGIHRLVRISPFDSNARRHTSFSSVYVFPV 222

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+IE++I   D R+DTYRA GAGGQHVN TDSAVR TH+PTG+VV CQ ERSQ  N+A
Sbjct: 223 LDDTIEVDIRPEDLRVDTYRAGGAGGQHVNKTDSAVRFTHLPTGIVVACQTERSQTMNRA 282

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A +MLRA+LYE   +++E+      S K +I WG QIRSYV QPY MVKD RT  E  +
Sbjct: 283 TAMSMLRARLYEYYREQKEKENAKFASEKKDISWGNQIRSYVFQPYTMVKDHRTKHEIGN 342

Query: 335 PSDVLDGDLDDFMKATLA 352
              V+DG +D F++A LA
Sbjct: 343 IQSVMDGAIDPFIEAFLA 360


>gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
 gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
          Length = 328

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 168/319 (52%), Positives = 218/319 (68%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P+ W +   A++++ E   L + +    ++ +   +  +  EL  EE D  +  E ++ L
Sbjct: 4   PNFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKEESDEDLQNELAEEL 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             +   +   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ FK 
Sbjct: 64  TELTKRLAQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V 
Sbjct: 124 ETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ KN
Sbjct: 184 PEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           + +A  ML+AKLY+ +++++E+        + EIGWG QIRSYV  PY MVKD RT+ E 
Sbjct: 244 RERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTSTES 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   V+DGDLD F+ A L
Sbjct: 304 GNVQGVMDGDLDPFINAYL 322


>gi|254497462|ref|ZP_05110255.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
 gi|254353277|gb|EET12019.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
          Length = 335

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 225/321 (70%), Gaps = 1/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E   +W N   A+ L RER  L+N +  +  +   + D   L ELA EE+D   + E   
Sbjct: 9   ESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQAINEIGA 68

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+ I+ +V   +F  + SG  D  +AYL++ +G+GGTE+QDWA MLLRMY RW E+  F
Sbjct: 69  ELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEQHGF 128

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++
Sbjct: 129 TTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH
Sbjct: 189 ISPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQCQNDRSQH 248

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL   + +KDLRT +
Sbjct: 249 RNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   VLDG LD F++A+L
Sbjct: 308 ETSNTQAVLDGALDQFIEASL 328


>gi|208780604|ref|ZP_03247943.1| peptide chain release factor 2 [Francisella novicida FTG]
 gi|254373627|ref|ZP_04989111.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|151571349|gb|EDN37003.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|208743579|gb|EDZ89884.1| peptide chain release factor 2 [Francisella novicida FTG]
          Length = 325

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 228/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K     I DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|296127692|ref|YP_003634944.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
 gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
          Length = 367

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/352 (48%), Positives = 234/352 (66%), Gaps = 6/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q   L G  D D+  +R+  ++  +     W + I+A+ LM+ER  L + I  ++ +
Sbjct: 13  IKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKIEPVENL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119
                +   L+E+A+E +D  + +E       LQR+  E+E K   +L SGE DS +AYL
Sbjct: 73  IKNSNNIYELVEMAIESNDIEMEKELEGECIELQRVFDELETK---NLFSGEFDSKNAYL 129

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+EAGIK  +  ++G  AYG
Sbjct: 130 TLNAGAGGTESCDWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLYAYG 189

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI+ SD R+DTYRASGAG
Sbjct: 190 YLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINPSDLRVDTYRASGAG 249

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+AKLY+LE  K ++     
Sbjct: 250 GQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKI 309

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG++D+F+ A L
Sbjct: 310 AGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYL 361


>gi|296158326|ref|ZP_06841157.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
 gi|295891270|gb|EFG71057.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
          Length = 280

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 158/277 (57%), Positives = 212/277 (76%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE D + L     + Q I+  V   +F  + S  AD N+A+L++ AGAGGTE+ DWA
Sbjct: 1   MAREEGDEATLLACESDAQGIEQRVADMEFRRMFSNPADPNNAFLDIQAGAGGTEACDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR S
Sbjct: 61  AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 121 PFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ KT++GWG QIRS
Sbjct: 181 MPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 241 YVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 276


>gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|207725248|ref|YP_002255644.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
 gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
          Length = 300

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 157/280 (56%), Positives = 214/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ AGAGGTE+ 
Sbjct: 18  LFELAREEGDDDTIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSA++ ++G  A+G+L+ E GVHRLV
Sbjct: 78  DWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR
Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E+SKT++GWG Q
Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIQASL 296


>gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes Clip81459]
 gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
           A]
          Length = 338

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 169/330 (51%), Positives = 220/330 (66%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  EE D
Sbjct: 4   RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R
Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV
Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY 
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKD RTN E  +   V+DGDLD+F+ A L
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDEFINAYL 333


>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
 gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
          Length = 341

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 162/331 (48%), Positives = 229/331 (69%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R++ L     DP  W++  +A+  M+E   L + +    ++  +  D  +L EL  EE+
Sbjct: 6   ERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAEEE 65

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  ILQE  + +Q I+ E++    + LL+G  D N+A + +HAGAGGTE+ DW  ML+RM
Sbjct: 66  DPDILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEAMDWNEMLMRM 125

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RW EK+ +K + L+   G+EAG+KSATL   G NAYG+LKGE GVHRLVRISP+D++ 
Sbjct: 126 YIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPFDASG 185

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P V D I+I+I+  D ++DT+RASGAGGQHVN T+SAVRITHIPTG+V
Sbjct: 186 RRHTSFASVEVLPEVSDDIDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTGIV 245

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ ERSQ +N+A A  ML+AKL+E + Q++ +  N  +  + +I +G QIRSYV  PY
Sbjct: 246 VACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYVFHPY 305

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +VKD RTN E  +  +V+DG++DDF+ A +
Sbjct: 306 NLVKDHRTNCEVGAVYNVMDGEIDDFVSAYM 336


>gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
 gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
          Length = 379

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 160/338 (47%), Positives = 232/338 (68%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D ++  Q++  LN + E P  W +   +   M+E + L + +    ++++ + +  +L+
Sbjct: 26  LDLESKHQKIEELNREMEAPDFWNDADLSARKMKELKSLKDDVEIADKLKNSIEEIGMLM 85

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++A EEDD  ++ E    + ++K + E  + ++LLSGE D+N+A + +HAGAGGTE+ DW
Sbjct: 86  DMANEEDDADMVGEIRLMMDQMKEDFERVRIKTLLSGEFDANNAIVTLHAGAGGTEACDW 145

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             ML RMYTRWA  + F+ E L+  DG+EAGIK+ T  + G NAYG+LK E+GVHRLVRI
Sbjct: 146 TAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQVNGENAYGYLKSEKGVHRLVRI 205

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++N +R TSFSS  V P ++  +++E+ + D RIDTYR+SGAGGQH+N T SA+RIT
Sbjct: 206 SPFNANGKRQTSFSSCDVMPELEQDLDVEVKDEDIRIDTYRSSGAGGQHINKTSSAIRIT 265

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ ERSQH NK +A  ML+AKLY L++++++  A       T+I WG QIR
Sbjct: 266 HFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIRGEVTDIAWGNQIR 325

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV QPY MVKDLRT  E  + S V+DGD++ F+ A L
Sbjct: 326 SYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYL 363


>gi|149194096|ref|ZP_01871194.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
 gi|149136049|gb|EDM24527.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
          Length = 364

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 175/349 (50%), Positives = 236/349 (67%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  +  +   D   +RL  +     DP+ W +   +  + +E+  +   +   K+ 
Sbjct: 13  LENKLKNIESILKPDELQKRLDEITQMENDPNFWNDPKNSAKIQKEKNAILRKLEKYKKA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L DN  + ELA  E+D   L E  ++++ ++  +   + E +LSGE D  +A + +H
Sbjct: 73  KNSLQDNKDMYELATMEEDEETLNEVFNDVKELEKIIRDLEIEVMLSGENDDKNAIITIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+AE+R +K + L+   G+EAGIK AT+L+KG NAYG+LK
Sbjct: 133 PGAGGTESHDWASMLYRMYLRYAERRGWKVDILDYQAGDEAGIKDATILVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR+SP+DS  RRHTSF+S+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDEKDIRIDVYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+VV CQQ+RSQHKNK  A+ ML++KLYELEL+KR+  A      
Sbjct: 253 VNKTESAVRITHIPTGIVVSCQQDRSQHKNKEMAFKMLKSKLYELELEKRK--AEEEGKP 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K E+GWG QIRSYVL PYQ VKD R+N   +   D+LDGDLD+ ++  L
Sbjct: 311 KDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSKVDDILDGDLDEIIEDVL 359


>gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
 gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
          Length = 331

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/323 (52%), Positives = 220/323 (68%), Gaps = 2/323 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A++++ E   L   +    ++ +   +  +  EL  EE D  +  +  + L
Sbjct: 4   PGFWDDQQAAQVVISESNSLKEQVVEFHDLYETFENLELTYELVKEESDAELQADLEEEL 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           + +   +   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ FK 
Sbjct: 64  KDLVKRLNDFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V 
Sbjct: 124 ETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ KN
Sbjct: 184 PEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           + +A  ML+AKLY+ +++++E E+A I    + +IGWG QIRSYV  PY MVKD RTN E
Sbjct: 244 RERAMKMLQAKLYQKKIEEQEAELAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDLD F+ A L  K
Sbjct: 303 VGNVQGVMDGDLDMFINAYLRSK 325


>gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 327

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 167/323 (51%), Positives = 218/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E    
Sbjct: 3   DPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELEKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK
Sbjct: 63  LKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFNDEIDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ A L  K
Sbjct: 303 MGNVQAVMDGDIDTFIDAYLRSK 325


>gi|254447294|ref|ZP_05060761.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
 gi|198263433|gb|EDY87711.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
          Length = 300

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 160/293 (54%), Positives = 210/293 (71%), Gaps = 1/293 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  I   L D   L+E+A EE D   L    D++  +   VE  +F  + SGE D  +AY
Sbjct: 5   LDRITSGLGDAGDLIEMAKEEGDEETLAAVEDDIAELTDAVENLEFRRMFSGEMDEKNAY 64

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L++ AG+GGTE+QDWANMLLRMY RW ++  FK E +E+ +G+ AGIKSAT+ I+G  A+
Sbjct: 65  LDIQAGSGGTEAQDWANMLLRMYLRWCDQHGFKNEIVELSEGDVAGIKSATIHIQGDYAF 124

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           GWL+ E GVHRLVR SP+DS  RRHTSF+S+++ P VDDS +I+I+ +D R+DTYR+SGA
Sbjct: 125 GWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFDIDINPADLRVDTYRSSGA 184

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITH P+GVVV CQ +RSQH N+  A   L+AKL+ELE+QKR  +   
Sbjct: 185 GGQHVNTTDSAVRITHAPSGVVVSCQNQRSQHANRDFAMKQLKAKLWELEMQKRNAVKQE 244

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E +K +IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 245 AEDNKADIGWGSQIRSYVLDASR-IKDLRTGVETGNTQAVLDGSLDPFIEASL 296


>gi|89257152|ref|YP_514514.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315491|ref|YP_764214.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503377|ref|YP_001429442.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254368376|ref|ZP_04984394.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|254368387|ref|ZP_04984404.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|89144983|emb|CAJ80343.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130390|gb|ABI83577.1| peptide chain release factor B [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254184|gb|EBA53278.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253980|gb|ABU62486.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121281|gb|EDO65482.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 325

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 170/321 (52%), Positives = 228/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|328676241|gb|AEB27111.1| Peptide chain release factor 2 [Francisella cf. novicida Fx1]
          Length = 325

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 229/321 (71%), Gaps = 3/321 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +
Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T+   VLDGDLD F++A+L
Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321


>gi|254831068|ref|ZP_05235723.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
          Length = 327

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 168/320 (52%), Positives = 215/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E   +
Sbjct: 3   DPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK
Sbjct: 63  IKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V
Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K
Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLDDF+ A L
Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322


>gi|303241850|ref|ZP_07328345.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
 gi|302590625|gb|EFL60378.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
          Length = 340

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 162/329 (49%), Positives = 223/329 (67%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  +P  W ++  ++ ++++ + +   +     +     D   L EL LEEDD S+ 
Sbjct: 8   LEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLEEDDESVF 67

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  D+ ++ K + E  + E+LL G  D N+A L +HAGAGGTE+QDW  MLLRM+TRW 
Sbjct: 68  TEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFTRWG 127

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + F    L+  DGEEAGIKS T+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTS
Sbjct: 128 ESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPFDASGRRHTS 187

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S  V P + D +E+ I+  D RIDTYRASGAGGQH+N T+SA+RITHIPTGVVV CQ 
Sbjct: 188 FASCDVMPELSDDVEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTGVVVACQT 247

Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ +NK  A  ML++KL E+ E +++E+I ++ +  + +I WG QIRSYV  PY +VK
Sbjct: 248 ERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDL-KGIQMDIAWGSQIRSYVFCPYTLVK 306

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           D RTN E+ +  +V+DGDLD F+ + L  
Sbjct: 307 DHRTNYEQINVDNVMDGDLDGFINSYLVF 335


>gi|302390246|ref|YP_003826067.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
 gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
          Length = 365

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 162/326 (49%), Positives = 223/326 (68%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  KT  P+ W +   A+ +++    L   +   + I+ +  D + L+EL +E+ D  + 
Sbjct: 35  LEEKTLTPNFWDDAQAAQKILQTLNQLKETVEKFEAIKKKWEDLMTLIELGIEDHDEGLY 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E S   +  K E E  + ++LL G  D N+A L +HAGAGGTE+QDW  MLLRMYTRWA
Sbjct: 95  GEISAEAEEFKKEFEEMRLKTLLRGRYDKNNAILSLHAGAGGTEAQDWVQMLLRMYTRWA 154

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +K + L++  GEEAGIKSAT+L++GP AYG+LK EQGVHRLVRISP+D+  RRHTS
Sbjct: 155 EDKGYKVKVLDMLPGEEAGIKSATILVEGPYAYGYLKSEQGVHRLVRISPFDAAGRRHTS 214

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P ++D IE+EI   D +I+T+R+ GAGGQ+VN T+SAVRITHIPTG+VV CQ 
Sbjct: 215 FASVDVIPEIEDDIEVEIKPEDLKIETFRSGGAGGQYVNKTESAVRITHIPTGIVVTCQN 274

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  +LRAKL+ L L+++++  N     + EI WG QIRSYV  PY +VKD
Sbjct: 275 ERSQQSNRNTAMKLLRAKLFNLYLEEQQKKINELRGEQKEIAWGNQIRSYVFHPYSLVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN+E  +   V+DG++D F+ A L
Sbjct: 335 HRTNVEVGNVQAVMDGEIDMFINAYL 360


>gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
          Length = 326

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 160/321 (49%), Positives = 215/321 (66%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W N   ++ + ++   L + +     ++    D  ++LEL  EE+D  +  E   +L  
Sbjct: 6   FWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEEDPLLDDELKSDLAS 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   V   + E +LSG  D NDA L +HAGAGGTESQDW  MLLRM+TR+ E   +K E 
Sbjct: 66  LTKRVADMELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHNYKVEV 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L++  G+EAG+KSAT+ + GPNAYG+LK E+GVHRLVRISP+D+  RRHTSF+S+ V PV
Sbjct: 126 LDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASVDVLPV 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD +E+ I   D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ  N+A
Sbjct: 186 VDDEVEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTYNRA 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  +L+AKL +LEL+K+EE        + +I WG QIRSYV  PY +VKD RT +E  +
Sbjct: 246 AAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTGVEVGN 305

Query: 335 PSDVLDGDLDDFMKATLAIKK 355
              V+DG +D+F+ A L  K+
Sbjct: 306 VYAVMDGAIDEFIAAYLKQKR 326


>gi|224503251|ref|ZP_03671558.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561]
          Length = 338

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 169/330 (51%), Positives = 219/330 (66%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  EE D
Sbjct: 4   RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  EDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R
Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV
Sbjct: 184 RHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY 
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333


>gi|161615988|ref|YP_001589953.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|213425820|ref|ZP_03358570.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213646961|ref|ZP_03377014.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238909840|ref|ZP_04653677.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289823819|ref|ZP_06543431.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|16421591|gb|AAL21916.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161365352|gb|ABX69120.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|261248173|emb|CBG26009.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301159597|emb|CBW19116.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914062|dbj|BAJ38036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087470|emb|CBY97235.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225716|gb|EFX50770.1| Peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613439|gb|EFY10380.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621031|gb|EFY17889.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624095|gb|EFY20929.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628166|gb|EFY24955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633285|gb|EFY30027.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636137|gb|EFY32845.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639476|gb|EFY36164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647592|gb|EFY44081.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648776|gb|EFY45223.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653831|gb|EFY50157.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657937|gb|EFY54205.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664040|gb|EFY60239.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668949|gb|EFY65100.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673057|gb|EFY69164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677952|gb|EFY74015.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681128|gb|EFY77161.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687942|gb|EFY83909.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194862|gb|EFZ80049.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196613|gb|EFZ81761.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202687|gb|EFZ87727.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207826|gb|EFZ92772.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212622|gb|EFZ97439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214895|gb|EFZ99643.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222626|gb|EGA06991.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225095|gb|EGA09347.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230617|gb|EGA14735.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235032|gb|EGA19118.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239071|gb|EGA23121.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244571|gb|EGA28577.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247186|gb|EGA31152.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253331|gb|EGA37160.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256362|gb|EGA40098.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262462|gb|EGA46018.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267442|gb|EGA50926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269154|gb|EGA52609.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326624786|gb|EGE31131.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332989908|gb|AEF08891.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 293

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 168/280 (60%), Positives = 207/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818]
 gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818]
          Length = 338

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 169/330 (51%), Positives = 219/330 (66%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  EE D
Sbjct: 4   RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R
Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV
Sbjct: 184 RHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY 
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333


>gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 327

 Score =  329 bits (844), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 168/320 (52%), Positives = 214/320 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E   +
Sbjct: 3   DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +      +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK
Sbjct: 63  ITAYMATINAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V
Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K
Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLDDF+ A L
Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322


>gi|254796954|ref|YP_003081791.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
 gi|254590201|gb|ACT69563.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
          Length = 334

 Score =  329 bits (844), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 167/324 (51%), Positives = 234/324 (72%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            + P LW++   A++L++E+  ++ ++   +E+  +L D   ++ELA ++ +   +++  
Sbjct: 8   VDSPRLWEDQSRAQLLLKEKSQIETSLKEFRELSIQLDDLTEMIELASKDGEEGAMKDLE 67

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KR 148
             L  +K +++ K+ E L SGEAD ND  LE+ +GAGGTES DWA MLLRMYTRWAE   
Sbjct: 68  RELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTESNDWAMMLLRMYTRWAEIYH 127

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           KF+ + ++  +GEE GIKS TL + G NAYGW + E GVHRLVRISP+D+N++RHTSF+ 
Sbjct: 128 KFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKRHTSFAK 187

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V P ++  I I I E D +IDTYRASGAGGQHVN T+SAVRITH+P+ +VVQ Q  RS
Sbjct: 188 VFVSPCMEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAVRITHLPSKIVVQSQSSRS 247

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+NKA+A  ML+++LYE+EL+K+EE  N   + +  IGWG QIRSYVL PYQM+KDLRT
Sbjct: 248 QHQNKAEAIQMLKSRLYEIELRKKEEKVNAARNVEDSIGWGYQIRSYVLHPYQMIKDLRT 307

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
             E  + + VLDGDLD F+ AT++
Sbjct: 308 GHEVGNITSVLDGDLDSFIIATIS 331


>gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH187]
          Length = 380

 Score =  329 bits (844), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1]
          Length = 372

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 160/351 (45%), Positives = 238/351 (67%), Gaps = 8/351 (2%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           +++  L  + + +NA +R++ L  +T     W ++  ++ +++E++ L+  I    ++ D
Sbjct: 16  KEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERKIEKFNKLND 75

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L D + L+EL++E +D S ++E     +  K ++E ++  +LL+GE D  +A L  HAG
Sbjct: 76  SLEDLITLIELSIEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYDGANAILTFHAG 135

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA ML RMY RWAE+ +FK E L+  DG+EAG+KSA++LI+G NAYG++K E
Sbjct: 136 AGGTEAQDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIEGENAYGYMKSE 195

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+D+  RRHTSF+++ V P +DDSIE++I   D  ++ YR+SGAGGQ VN
Sbjct: 196 SGVHRLVRVSPFDAQGRRHTSFAALEVMPELDDSIEVDIRPEDIEMEVYRSSGAGGQKVN 255

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGE 300
            T SAVR+ H PTG+VV CQ +RSQ++NK  A  MLR+KL E++    L+K E+I  +  
Sbjct: 256 KTSSAVRLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGV-- 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +I WG QIRSYV  PY +VKD RT  E  +   V+DGD+D F+ A L
Sbjct: 314 --QNQIAWGSQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYL 362


>gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
 gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
          Length = 300

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 157/286 (54%), Positives = 214/286 (74%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   L ELA  +DD S L+    +    + ++E  +F  + S  AD  + +L++ AGA
Sbjct: 12  LADANELFELAKADDDDSTLESIEKDADAFQEKLENLEFRRMFSNPADPLNCFLDIQAGA 71

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLR Y R+AE++ FK E LE  +G+ AGIKSAT+ ++G  A+G+L+ E 
Sbjct: 72  GGTEAQDWASMLLRQYLRYAERKGFKVEVLEESEGDVAGIKSATIKMEGEYAFGYLRTET 131

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+N 
Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINK 191

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT+
Sbjct: 192 TDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTD 251

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 252 VGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 296


>gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187]
          Length = 380

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
 gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
          Length = 380

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 372

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/338 (50%), Positives = 230/338 (68%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D     L  L  +T  P  WQ++  ++ ++++ + L + I   +++  +  D  +L 
Sbjct: 25  LDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDLKVLT 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL+L+E +  + +E    L  ++ ++E  + E LL+G  D N+A L +HAGAGGTE+QDW
Sbjct: 85  ELSLDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI
Sbjct: 145 AEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHVN T+SAVRI 
Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +TEIGWG QIR
Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIR 324

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV  PY +VKD RT  E  +   V+DG++D F+ A L
Sbjct: 325 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362


>gi|62181551|ref|YP_217968.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205353965|ref|YP_002227766.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858304|ref|YP_002244955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224584830|ref|YP_002638628.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|62129184|gb|AAX66887.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205273746|emb|CAR38741.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206710107|emb|CAR34462.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224469357|gb|ACN47187.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322716032|gb|EFZ07603.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326629079|gb|EGE35422.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 293

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 168/280 (60%), Positives = 207/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAEARGFKTEIIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|296387792|ref|ZP_06877267.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           PAb1]
          Length = 248

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 156/245 (63%), Positives = 194/245 (79%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR   +   E SK++IGWG QIRSYVL   + +KDLRT IE++    VLDGDLD++
Sbjct: 181 LEMQKRTAASQALEDSKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEY 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 LEASL 244


>gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262]
 gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262]
          Length = 327

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 168/320 (52%), Positives = 214/320 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +   A+ ++ E             +++      I LEL  EE D  +  E   +
Sbjct: 3   DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELEKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK
Sbjct: 63  IKAYVATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V
Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K
Sbjct: 183 MPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLDDF+ A L
Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322


>gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
 gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
          Length = 328

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 173/323 (53%), Positives = 222/323 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +   A++++ E   L   ++  K++ +   +  + LEL  EE D  + +E    
Sbjct: 4   EPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLREEPDEELQEELGKE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK
Sbjct: 64  LAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TL IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLSIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCDV 183

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  DD+IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG +VQCQ ERSQ K
Sbjct: 184 MPEFDDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIVQCQAERSQIK 243

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+ KLY+LEL K++   +     + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 244 NREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEE 303

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDLD F+ A L  K
Sbjct: 304 TGNVGAVMDGDLDPFINAYLRSK 326


>gi|307718929|ref|YP_003874461.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
 gi|306532654|gb|ADN02188.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
          Length = 361

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 171/353 (48%), Positives = 234/353 (66%), Gaps = 9/353 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK----MLMRERQHLDNAISF 58
           + R+    GG+F+  +  +++S L  +T  P LW +   A+     L R +   +   S 
Sbjct: 1   MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++E++D       L +LA EE+D S  +E    L   + +    +   LL+ E D  DAY
Sbjct: 61  VQEVEDIHT----LYDLAAEENDPSQEEELRQQLAEAERKFRELRLRELLNEEYDQKDAY 116

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG  A+
Sbjct: 117 LTIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAF 175

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I   D RIDTYR+ GA
Sbjct: 176 GYLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGA 235

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+  A  MLR++LYE   Q REE    
Sbjct: 236 GGQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEK 295

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               K +I WG QIRSYV QPY MVKDLRT +E  +   V+DGDLD F++A L
Sbjct: 296 KAIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 348


>gi|302755404|ref|XP_002961126.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
 gi|300172065|gb|EFJ38665.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
          Length = 427

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 168/346 (48%), Positives = 226/346 (65%), Gaps = 1/346 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++R +  +     W + + +L  L  + E P LW +   A    RE   L + +  I+E+
Sbjct: 72  VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +N+ L+ELA EE D  +  E    L  ++   + K+  +LL  E D    +LEV 
Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ES D+A MLLRMY  WA +R F+   ++   G+ AGIK ATL ++G  AYG+ K
Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+D   RRHTSF+++ V P++D++  EIEI+E+D  ID +R+SGAGGQ
Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK  A  +LR++LY+LEL+++ E       
Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           S  EI WG QIRSYVLQPYQ+VKDLRT  E T+P+ VLDG LD F+
Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFI 417


>gi|218900306|ref|YP_002448717.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
 gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
          Length = 380

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 169/350 (48%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  +  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEVTHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|146328937|ref|YP_001209831.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
 gi|146232407|gb|ABQ13385.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
          Length = 305

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 163/293 (55%), Positives = 211/293 (72%), Gaps = 1/293 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  I   L D   L+ LA +E+D  ++Q    +++R++  VE  +F  + SGE D+N+A+
Sbjct: 8   LDNIHQGLNDARELMALAEDENDEELVQSARLDIERLQKSVEILEFRRMFSGELDANNAF 67

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L++ +G+GGTE+QDWA ML RMY RW E + F TE LE   G+ AGIKSAT+   G  AY
Sbjct: 68  LDIQSGSGGTEAQDWAEMLERMYLRWGEAKGFTTELLEETPGDVAGIKSATIRFTGEYAY 127

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           GWLK E GVHRLVR SP+D+N+RRHTSF++++V P +DD+IEI+I+ +D RID YRASGA
Sbjct: 128 GWLKTEIGVHRLVRKSPFDANNRRHTSFAAVFVSPEIDDAIEIDINPADLRIDVYRASGA 187

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITH+PTG VVQ Q  RSQH+NK      LRAKLY+LEL KR E A  
Sbjct: 188 GGQHVNRTESAVRITHLPTGTVVQSQDSRSQHQNKQTCMRHLRAKLYQLELHKRSESAQA 247

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E SK++IGWG QIRSYVL   Q +KDLRT  E ++   VLDGDLD F++ +L
Sbjct: 248 LEDSKSDIGWGNQIRSYVLDQ-QRIKDLRTGYETSNTQAVLDGDLDPFIQESL 299


>gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
 gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 369

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 164/351 (46%), Positives = 232/351 (66%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS+ +  +G L D       L  L    ++   W N+  A+ +    + + + I     
Sbjct: 13  ELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDLYNN 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            Q  + D  +L+E+A+EE+D S++ E  + +  +   VE  + E +LSGE D+N+A + +
Sbjct: 73  FQSSVEDIKVLIEMAIEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNNAIVTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+G GGT++ DW  MLLRMYTRW EK+ F  E L++  G+EAGIKSATL + G  AYG+L
Sbjct: 133 HSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +     +EI+ SD ++DTYRASGAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300
           HVN T+SA+RITHIPTG+VVQCQ ERSQ +N+  A NML++KL EL E   +E+I ++  
Sbjct: 253 HVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEKIEDLTG 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             K ++GWG QIRSYV  PY MVKD RTNI+      V+DG+LD F+K  L
Sbjct: 313 DLK-DMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362


>gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
 gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
          Length = 340

 Score =  328 bits (842), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 172/327 (52%), Positives = 222/327 (67%)

Query: 28  TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87
            +  +P  W +   A+ ++ E      A     E+ D L +  +LLE+  EE D  + QE
Sbjct: 10  NRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQEEPDDEMEQE 69

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            +     +  ++   +   LL G  D N+A +E+H GAGGTESQDW +MLLRMY RWA+K
Sbjct: 70  LATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSMLLRMYQRWADK 129

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R F+ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS +RRHTSF 
Sbjct: 130 RGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPFDSANRRHTSFC 189

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P +DD+I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +R
Sbjct: 190 SVDVMPELDDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 249

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD R
Sbjct: 250 SQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHR 309

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E  +   V+DGD+D F+ A L  K
Sbjct: 310 TNFETGNVQAVMDGDIDGFIDAYLKQK 336


>gi|302766928|ref|XP_002966884.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
 gi|300164875|gb|EFJ31483.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
          Length = 427

 Score =  328 bits (842), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 168/346 (48%), Positives = 226/346 (65%), Gaps = 1/346 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++R +  +     W + + +L  L  + E P LW +   A    RE   L + +  I+E+
Sbjct: 72  VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +N+ L+ELA EE D  +  E    L  ++   + K+  +LL  E D    +LEV 
Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ES D+A MLLRMY  WA +R F+   ++   G+ AGIK ATL ++G  AYG+ K
Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+D   RRHTSF+++ V P++D++  EIEI+E+D  ID +R+SGAGGQ
Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK  A  +LR++LY+LEL+++ E       
Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           S  EI WG QIRSYVLQPYQ+VKDLRT  E T+P+ VLDG LD F+
Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFI 417


>gi|262395207|ref|YP_003287061.1| peptide chain release factor 2 [Vibrio sp. Ex25]
 gi|262338801|gb|ACY52596.1| peptide chain release factor 2 [Vibrio sp. Ex25]
          Length = 260

 Score =  328 bits (842), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 155/254 (61%), Positives = 197/254 (77%), Gaps = 1/254 (0%)

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E +E+
Sbjct: 4   KLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEV 63

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +GE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D+
Sbjct: 64  SEGEVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDE 123

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           +I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA 
Sbjct: 124 NIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAM 183

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LRAKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT IE  +   
Sbjct: 184 KQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQA 242

Query: 338 VLDGDLDDFMKATL 351
           VLDGDLD F++A+L
Sbjct: 243 VLDGDLDKFIEASL 256


>gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
 gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
          Length = 308

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 162/293 (55%), Positives = 213/293 (72%), Gaps = 1/293 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           I  + D L D   LLELA  E D         +L + +  VE  +F+ + SGE D+  A+
Sbjct: 4   IASVLDGLTDATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAF 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ AGAGGTE+QDWA +LLRMY RW E R +KTE +E+  G+ AGIKSATL ++G  AY
Sbjct: 64  VDIQAGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           GWLK E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGA
Sbjct: 124 GWLKTETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGA 183

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITHIPT +VV CQ  RSQH+N+  A  ML AKLYELE+QKR    + 
Sbjct: 184 GGQHVNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDA 243

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E++K++IGWG QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 244 VEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 295


>gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064]
 gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes 1816]
          Length = 327

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 167/320 (52%), Positives = 215/320 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E   +
Sbjct: 3   DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK
Sbjct: 63  IKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V
Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K
Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD+F+ A L
Sbjct: 303 TGNIQAVMDGDLDEFINAYL 322


>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
 gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
          Length = 378

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 167/351 (47%), Positives = 232/351 (66%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  L  +  + D D   ++++ L  +   P LW +  +A+ +     HL   ++ I+E
Sbjct: 12  ELTGTLRGIQDVLDIDGLRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D  +L ELA EE D   L E    L ++K ++   +  +LLSGE D  +A + +
Sbjct: 72  LARRLEDLPVLFELAAEEGDQEALAEAERELAKLKSDIGALEVRTLLSGEYDEREALITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DWA MLLRMY RWAE++ + TE  +    EEAGIKS T  +K P AYG L
Sbjct: 132 NAQAGGVDAADWAQMLLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVRISP+D+ +RR TSF+ + V PVV+ + +IEI+E + RID YR+SG GGQ
Sbjct: 192 KGEHGTHRLVRISPFDNQARRQTSFAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A  +L+AKL  LE +++EE   + E 
Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMAVLKAKL--LERKRQEEAQAMAEL 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +T   WG QIR+YVL PYQ+VKDLRT +E  +P+ VLDGDLD F++A +
Sbjct: 310 RGETTTSWGTQIRNYVLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEI 360


>gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 327

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 168/320 (52%), Positives = 213/320 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +   A+ ++ E             +++      I LEL  EE D  +  E   +
Sbjct: 3   DPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELEKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +      +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK
Sbjct: 63  ITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V
Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K
Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLDDF+ A L
Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322


>gi|218906362|ref|YP_002454196.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
 gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
          Length = 380

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41]
 gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus
           C3-41]
          Length = 328

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 172/323 (53%), Positives = 224/323 (69%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +   A++++ E   L   ++  KE+++   +  + LEL  EE D  + +E    
Sbjct: 4   EPGFWDDQQGAQVIINEGNGLKAIVNEYKELEETHENLDMTLELLREEPDEELQEELGKE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK
Sbjct: 64  LVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 124 VETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCDV 183

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D++IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERSQ K
Sbjct: 184 MPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERSQIK 243

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+ KLY+LEL+K++   +     + +IGWG QIRSYV  PY MVKD RTN E
Sbjct: 244 NREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTNEE 303

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDLD F+ A L  K
Sbjct: 304 TGNVGAVMDGDLDPFINAYLRSK 326


>gi|261867765|ref|YP_003255687.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413097|gb|ACX82468.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 300

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 168/296 (56%), Positives = 218/296 (73%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ IK ++  L D   LLELA+E  D     E    L  ++ ++E  +F  + SGE D+ 
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAITELNALEQQLEKLEFRRMFSGEHDAC 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G 
Sbjct: 62  DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               E +K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDRFIEASL 296


>gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
 gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
          Length = 327

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 168/323 (52%), Positives = 219/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +A+ ++ E   L + ++   ++ +   +  +  EL  EE D  + QE    
Sbjct: 3   EPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKEEPDQELQQELEKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R  K
Sbjct: 63  LKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGCK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  ++ I+IEI   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ A L  K
Sbjct: 303 MGNVQAVMDGDIDIFIDAYLRSK 325


>gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
 gi|156864534|gb|EDO57965.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
          Length = 329

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 165/322 (51%), Positives = 226/322 (70%), Gaps = 2/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W +V ++  + R+ + L +++   ++++    D   L+++A EE D S+++E  +
Sbjct: 2   EQPGFWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEEEGDSSMIEEIGE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   + E E  +   LLSGE D  DA + +HAGAGGTES DW +ML RMYTRWAEK  F
Sbjct: 62  MLTAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEKHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+  +G+EAGIKS T+ I G NAYG+LK E+GVHRLVRISP+++  +R TSF+S  
Sbjct: 122 KVEVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ +E++I+E D RIDTYR+SGAGGQH+N T SAVRITHIPTG+VVQCQ ERSQH
Sbjct: 182 VIPEIEEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK +A  ML++KLY ++ Q+  ++I++I      E G+G QIRSYV+QPY MVKD RT 
Sbjct: 242 MNKDKAMQMLKSKLYLIKKQENLDKISDI-RGEILENGFGSQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  + + VLDG+LD FM A L
Sbjct: 301 EESGNVAAVLDGELDGFMNAYL 322


>gi|262163922|ref|ZP_06031661.1| peptide chain release factor 2 [Vibrio mimicus VM223]
 gi|262172260|ref|ZP_06039938.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|261893336|gb|EEY39322.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|262027450|gb|EEY46116.1| peptide chain release factor 2 [Vibrio mimicus VM223]
          Length = 263

 Score =  328 bits (842), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 155/260 (59%), Positives = 202/260 (77%), Gaps = 1/260 (0%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +++++E  +F  + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FK
Sbjct: 1   MDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFK 60

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++
Sbjct: 61  TEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFI 120

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHK
Sbjct: 121 YPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 180

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT IE
Sbjct: 181 NKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIE 239

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   VLDGDLD F++A+L
Sbjct: 240 NRNTQAVLDGDLDKFIEASL 259


>gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2]
          Length = 367

 Score =  328 bits (841), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 160/287 (55%), Positives = 206/287 (71%), Gaps = 4/287 (1%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D+L + E+   E D S+  E       +   +   +F+S+LS   D +D++L +H GAG
Sbjct: 74  SDSLEMAEMLKAEGDESMAPELEKQAAELAQRLNDLEFKSMLSEAEDVSDSFLHIHPGAG 133

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWANMLLRMYTRWAE++ FK E +++  GE AGI   TL ++G  A+G+LK E G
Sbjct: 134 GTESCDWANMLLRMYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESG 193

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+N RRHTSF+S+  Y  V D IE+EI + D RIDTYR+SGAGGQHVN T
Sbjct: 194 VHRLVRISPFDANKRRHTSFASVHAYAEVTDDIEVEILDKDLRIDTYRSSGAGGQHVNVT 253

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE--EIANIGESSKT 304
           DSAVRITHIPT +VV CQ ERSQHKNKA A  +LR++LY+L  ++RE  + A  GE  K 
Sbjct: 254 DSAVRITHIPTKIVVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGE--KK 311

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +I WG QIRSYV QPYQMVKDLRT++E ++   V+DG +D F++A L
Sbjct: 312 DISWGSQIRSYVFQPYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFL 358


>gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52787452|ref|YP_093281.1| hypothetical protein BLi03772 [Bacillus licheniformis ATCC 14580]
 gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
 gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52349954|gb|AAU42588.1| PrfB [Bacillus licheniformis ATCC 14580]
 gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
          Length = 327

 Score =  328 bits (841), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 165/323 (51%), Positives = 220/323 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E   L + ++  K + +   +  +  +L  E+ D  +  E  + 
Sbjct: 3   DPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKEDPDQDLQNELVNE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK
Sbjct: 63  LKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  ++ I+IEI   D ++DTYRASGAGGQHVNTTDSAVRITH+PTGV+V CQ ERSQ K
Sbjct: 183 MPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN E
Sbjct: 243 NRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ A L  K
Sbjct: 303 MGNVQAVMDGDIDSFIDAYLRSK 325


>gi|295401151|ref|ZP_06811124.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976744|gb|EFG52349.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 327

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 176/323 (54%), Positives = 227/323 (70%), Gaps = 2/323 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ ++ E   L + +   + +++R  +  +  EL  EE D  + QE     
Sbjct: 4   PDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYELIKEEPDEDLQQELVTEA 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           +R+  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ FK 
Sbjct: 64  KRLTKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S  V 
Sbjct: 124 ETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVI 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD IEIEI   + RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ KN
Sbjct: 184 PEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           + +A NML+AKLY+ +L++++ E+A I    + EIGWG QIRSYV  PY +VKD RTN+E
Sbjct: 244 REKALNMLKAKLYQKKLEEQQAELAEI-RGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DG++D F+ A L  K
Sbjct: 303 VGNVQAVMDGEIDIFIDAYLRSK 325


>gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis M50/1]
 gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis XB6B4]
          Length = 338

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 161/321 (50%), Positives = 217/321 (67%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P+ W + + ++  M+E + + + ++    ++    D   L+E+  EE+D S++ E  +
Sbjct: 2   EAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L       E  + ++LLSGE DS+ A + +HAGAGGTES DWA ML RMYTRWA  + F
Sbjct: 62  MLDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DGEEAGIKS T  I G NAYG++K E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 SVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ 
Sbjct: 182 VMPDIEEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKLY L+ Q+  E A       TEIGWG QIRSYV+QPY MVKD RT +
Sbjct: 242 QNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTGV 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG +D F+   L
Sbjct: 302 ETGNVDSVMDGKIDIFINGYL 322


>gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54]
 gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila
           LSv54]
          Length = 285

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 158/281 (56%), Positives = 206/281 (73%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +LLE+A EE D  I QE +  L      +   + E +  GE DS +A + +HAGAGGTE+
Sbjct: 1   MLLEMAAEEGDQEIEQEIALKLGSFANALAAIELECMFIGEHDSCNAIISIHAGAGGTEA 60

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW ++LLRMY RWAE+ KFKTE L++  G+EAG KS T+LIKG  AYG+L+ E G+HRL
Sbjct: 61  QDWTDILLRMYLRWAERHKFKTEILDLLPGDEAGTKSITILIKGQWAYGYLRSELGIHRL 120

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P +D++++++I E D R+DTYRASGAGGQHVN TDSA+
Sbjct: 121 VRISPFDTSGRRHTSFASVMVMPELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKTDSAI 180

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTGVVVQCQ ERSQH+NK  A  ML A++Y+LE QK+ +        K  I WG 
Sbjct: 181 RLTHLPTGVVVQCQNERSQHRNKEMAMKMLIAQIYQLEKQKKADQQEGLHGEKKGISWGS 240

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVLQPY+++KD RT+ E  +   VLDG LD F+KA L
Sbjct: 241 QIRSYVLQPYRLIKDHRTDFEAGNVDAVLDGGLDGFIKAFL 281


>gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
 gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
          Length = 368

 Score =  328 bits (841), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 167/344 (48%), Positives = 232/344 (67%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     +  +  D  
Sbjct: 20  GFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLS 79

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+
Sbjct: 80  TLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEA 139

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRL
Sbjct: 140 QDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRL 199

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAV
Sbjct: 200 VRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAV 259

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     +    E  WG 
Sbjct: 260 RITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGN 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 320 QIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
 gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
          Length = 369

 Score =  328 bits (840), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 169/347 (48%), Positives = 229/347 (65%), Gaps = 8/347 (2%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC-- 67
           +G   D +    + S L   + D   W ++  A+ ++++ ++  + I    E  D+LC  
Sbjct: 21  MGNRLDIEGCKVKASELEEMSMDNAFWNDIERAQSVLQQLKNYKDRI----EKYDKLCGS 76

Query: 68  --DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D L+L+E+A E++D  + +E     +  + +       +LL  E D N+A LE+H GA
Sbjct: 77  FEDILVLIEMANEDEDIGLAEEAKACAKTFEEDYSEMLTATLLDQEYDRNNAILELHPGA 136

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+ DW  ML RMYTRWA+++ FK E L+  DG+EAGIKS T+ I G NAYG+LK E+
Sbjct: 137 GGTEACDWVAMLFRMYTRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKSEK 196

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G+HRLVRISP+DS+ RRHTSF+S  V P + D IEI+I   D RIDTYR++GAGGQHVNT
Sbjct: 197 GIHRLVRISPFDSSGRRHTSFASCDVIPEITDEIEIDIRPEDLRIDTYRSTGAGGQHVNT 256

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PT +VVQCQ ERSQ +N+ +A  ML+AKLYE E ++R +  +     K +
Sbjct: 257 TDSAVRITHLPTNIVVQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEKKD 316

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           I WG QIRSYV  PY MVKD RT+ E  + S V+DGD+D FM A L 
Sbjct: 317 IAWGSQIRSYVFHPYNMVKDHRTSEETGNTSAVMDGDIDRFMNAYLG 363


>gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42]
 gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42]
          Length = 327

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 167/323 (51%), Positives = 219/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +A+ ++ E   L   ++   ++ +   +  +  +L  EE D  + QE    
Sbjct: 3   EPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKEEPDQDLQQELEKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK
Sbjct: 63  LKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ A L  K
Sbjct: 303 MGNVQAVMDGDIDIFIDAYLRSK 325


>gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. Ames]
          Length = 365

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 226/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 12  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 72  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 361


>gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105]
 gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105]
          Length = 304

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 156/300 (52%), Positives = 215/300 (71%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           LD  +  +  +Q  + D+  L+E+A  E D   L+     +   +  +   +F  + S  
Sbjct: 2   LDGVVVTMNTVQSNISDSKELVEMAEAEGDFDTLEAIESEVAEYEKVIADLEFRRMFSNP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  + ++++ AGAGGTE+QDWA++LLR Y R+ E++ FK E +E  DGE AGIKSAT+ 
Sbjct: 62  ADPANCFIDITAGAGGTEAQDWASILLRQYLRYCERKGFKVEVMEQSDGEVAGIKSATIK 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G  A+G+L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VDDS EIEI+ +D R D
Sbjct: 122 VEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSFEIEINPADVRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW ML+AKLYE E++K
Sbjct: 182 TYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWGMLKAKLYEFEMRK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R       E +KT++GWG QIRSYVL   + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 242 RMAEQQALEDTKTDVGWGHQIRSYVLDNSR-IKDLRTGVEISNTQRVLDGDLDPFIEASL 300


>gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 313

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 164/300 (54%), Positives = 217/300 (72%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  +  I ++   L D   LL+LA  E D         +L + +  VE  +F+ + SG+
Sbjct: 2   LEKTVIGIADVLAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQ 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ 
Sbjct: 62  MDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D
Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QK
Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R    +  E++K++IGWG QIR+YVL   + +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 242 RNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 300


>gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046]
          Length = 328

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 171/323 (52%), Positives = 220/323 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +   A+ ++ E   +   ++  KE+ D   +  + LEL  EE D  + +E    
Sbjct: 3   EPEFWNDQNGAQAIINESNGIKAVVNEYKELVDTQENLEMTLELLREEPDEELQEEIGKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L   + ++E  + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK
Sbjct: 63  LAEFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              ++   G+EAGIKS TL I G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VTTIDYLPGDEAGIKSVTLQISGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  +D IEI+I   D ++DTYRA+GAGGQH+NTTDSAVRITH+PTGVVVQCQ ERSQ K
Sbjct: 183 MPEFNDEIEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVVQCQSERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KLY+LE++K++   +     + EIGWG QIRSYV  PY MVKD RT+ E
Sbjct: 243 NRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTSAE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDLD F+ A L  K
Sbjct: 303 TGNVGAVMDGDLDIFITAYLRSK 325


>gi|16804547|ref|NP_466032.1| peptide chain release factor 2 [Listeria monocytogenes EGD-e]
 gi|16411997|emb|CAD00587.1| prfB [Listeria monocytogenes EGD-e]
          Length = 327

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 167/320 (52%), Positives = 214/320 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E   +
Sbjct: 3   DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK
Sbjct: 63  IKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V
Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K
Sbjct: 183 MPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLDDF+ A L
Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322


>gi|227817946|ref|YP_002817955.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229604792|ref|YP_002869406.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
 gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
          Length = 380

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 226/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|261491637|ref|ZP_05988220.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261494996|ref|ZP_05991465.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309405|gb|EEY10639.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261312763|gb|EEY13883.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 304

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 164/303 (54%), Positives = 216/303 (71%), Gaps = 7/303 (2%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLL 108
           L+  ++ IK ++  + D   L+ELA+E +D     E    +D L++   ++E+K+   + 
Sbjct: 2   LEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVEADELEKKLADLEFKR---MF 58

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           SG  DS D YL++ AG+GGTE+QDW  MLLRMY RWAE + FK E +E  DG+ AGIKSA
Sbjct: 59  SGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKAELMEASDGDVAGIKSA 118

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           T+ I G  AYGW + E G+HRLVR SP+D+N+ RHTSFS+ +VYP VDD I+IEI+ +D 
Sbjct: 119 TVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFSAAFVYPEVDDDIDIEINPADL 178

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYELE
Sbjct: 179 RIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYELE 238

Query: 289 LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           + K+       E +K++IGWG QIRSYVL   + +KD RT +E  +   VLDGDLD F++
Sbjct: 239 MSKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDHRTGVEHRTTQQVLDGDLDKFVE 297

Query: 349 ATL 351
           A+L
Sbjct: 298 ASL 300


>gi|293390164|ref|ZP_06634498.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950698|gb|EFE00817.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 300

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 167/296 (56%), Positives = 218/296 (73%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ IK ++  L D   LLELA+E  D     E    L  ++ ++E  +F  + SGE D+ 
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAIAELNALEQQLEKLEFRRMFSGEHDAC 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G 
Sbjct: 62  DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 296


>gi|254900353|ref|ZP_05260277.1| peptide chain release factor 2 [Listeria monocytogenes J0161]
          Length = 327

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 167/320 (52%), Positives = 214/320 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E   +
Sbjct: 3   DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK
Sbjct: 63  IKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V
Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K
Sbjct: 183 MPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLDDF+ A L
Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322


>gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 278

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 154/260 (59%), Positives = 197/260 (75%), Gaps = 1/260 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +L+LA+E DD S+L++    L   + E+   +F  + S   D N  Y+E+ AG+GGTE+Q
Sbjct: 1   MLDLAVEADDESLLEDVQSELSTAEEELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLV
Sbjct: 61  DWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VV CQ +RSQH N+  AW  LRAKLYELE+QKR E A   E SK++IGWG Q
Sbjct: 181 LTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALEDSKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIE 331
           IRSYVL   + +KDLRT +E
Sbjct: 241 IRSYVLDDSR-IKDLRTGVE 259


>gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905]
 gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905]
          Length = 328

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 172/321 (53%), Positives = 226/321 (70%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90
           +P  W +   A++++ E   L   ++  KE+++ + +NL + LEL  EE D  + +E   
Sbjct: 4   EPGFWDDQQGAQVIINEGNGLKAIVNEYKELEE-IHENLDMTLELLREEPDEELQEELGK 62

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR F
Sbjct: 63  ELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGF 122

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E ++   G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S  
Sbjct: 123 KVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCD 182

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P  D++IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERSQ 
Sbjct: 183 VMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+ +A  ML+ KLY+LEL+K++   +     + +IGWG QIRSYV  PY MVKD RTN 
Sbjct: 243 KNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTNE 302

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGD+D F+ A L
Sbjct: 303 ETGNVGAVMDGDVDPFINAYL 323


>gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 370

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 178/350 (50%), Positives = 239/350 (68%), Gaps = 10/350 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L+ L    D +    ++  LN K  + + W +  +A+ +++E       ++   EI D +
Sbjct: 19  LDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELNSYQRKVNPYDEISDLI 78

Query: 67  CD-NLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEV 121
            D N ILL + +E+D  S      D  +++ L +E K    + E+LL+GE D NDA L +
Sbjct: 79  EDANDILLLMEMEDDYSSY-----DEFKKLILNIEKKVSEYKLETLLNGEFDENDAILSI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDWA+MLLRMY R+A  + FK E L+I   +EAGIKS TL I G +AYG+L
Sbjct: 134 HAGAGGTEAQDWASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSVTLKISGEHAYGFL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+D+N RRHTSFSS+ V+P +D  I+IEI + D +IDTYR+SGAGGQ
Sbjct: 194 KGEKGVHRLVRISPFDANKRRHTSFSSVDVFPDIDGDIDIEIKDEDLKIDTYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A   L+AKL  L  ++R+E  +  + 
Sbjct: 254 HVNTTDSAVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + ++I WG QIRSYV QPY +VKD RTN E    + V+DGDLD F+ A L
Sbjct: 314 NYSQIAWGSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYL 363


>gi|294634840|ref|ZP_06713362.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
 gi|291091713|gb|EFE24274.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
          Length = 293

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 211/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L ++++++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFDEAVAELDQLEVKLGQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEVQKKNAERQQMEENKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289


>gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
 gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
          Length = 326

 Score =  327 bits (839), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 229/322 (71%), Gaps = 2/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W +  +A+ +  E + L + +   KE++ ++ D   L +LA+EE+D S  ++   
Sbjct: 2   QEPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDIIR 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            ++ I  E E  + E LLSGE D N+A +++H G GGT++QDW  MLLRMYTRWAEK+ F
Sbjct: 62  EVEEIDNETERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRWAEKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E ++I   E+AGIKSATL I G  AYG+LK E+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 122 KIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASIE 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + ++ +I+I   D ++DTYR+SGAGGQHVN T+SA+RITHIPTG+VVQCQ +RSQH
Sbjct: 182 VLPELTNNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQNQRSQH 241

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            N+ +A  ML+AKL EL E   +E+I ++    K ++GWG QIRSYV QPY MVKD RT+
Sbjct: 242 HNREEAMRMLKAKLAELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFQPYTMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E  + + V+DGD+D F+   L
Sbjct: 301 VECGNINAVMDGDIDQFINEYL 322


>gi|238921196|ref|YP_002934711.1| peptide chain release factor 2, [Edwardsiella ictaluri 93-146]
 gi|238870765|gb|ACR70476.1| peptide chain release factor 2, putative [Edwardsiella ictaluri
           93-146]
 gi|304560096|gb|ADM42760.1| Peptide chain release factor 2 [Edwardsiella tarda FL6-60]
          Length = 293

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 209/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  + +++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMEDTKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289


>gi|127511745|ref|YP_001092942.1| peptide chain release factor 2 [Shewanella loihica PV-4]
 gi|126637040|gb|ABO22683.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           loihica PV-4]
          Length = 293

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 155/280 (55%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EEDD     + +  L  ++  +E  +F  + SG  D++D YL++ +G+GGTE+Q
Sbjct: 11  LLELAVEEDDEDTFNDANSELAGLEKRLEELEFRRMFSGPNDASDCYLDIQSGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANM+LRMY RW E + +K E +E+ DG+ AGIK AT+   G  A+G L+ E GVHRLV
Sbjct: 71  DWANMVLRMYLRWGEAKGYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG Q
Sbjct: 191 ITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289


>gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
 gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
          Length = 303

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/281 (54%), Positives = 207/281 (73%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ILLELA+ E+D    QE + +L+ ++  +   + E + SGE D+N+A L +HAGAGGTE+
Sbjct: 20  ILLELAIAEEDRETEQEVAGHLKNLESRLAELELECMFSGEHDANNAILTIHAGAGGTEA 79

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  +LLRMY RWAE + F T+ L++  G+EAGIK  T+++KG  AYG+L+ E G+HRL
Sbjct: 80  QDWVEILLRMYLRWAENKGFTTDTLDLLPGDEAGIKGVTVMVKGRWAYGYLRSEMGIHRL 139

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+  RRHTSF+S++++P + D I +E+++ D RIDT+RASGAGGQHVN T SA+
Sbjct: 140 VRISPFDTGGRRHTSFASVFIFPELTDDIAVEVNDKDLRIDTFRASGAGGQHVNKTSSAI 199

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+V QCQ ERSQH+NK  A  ML+A+LYE +  +R E        K EI WG 
Sbjct: 200 RITHLPTGIVAQCQNERSQHRNKDTAMKMLKAQLYERQQAQRREDQEHLHGDKKEIAWGS 259

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVLQPY++VKD RT+ E  +   VLDG++D F+K+ L
Sbjct: 260 QIRSYVLQPYRLVKDHRTDHETGNVDSVLDGNIDPFIKSYL 300


>gi|269140268|ref|YP_003296969.1| protein chain release factor B [Edwardsiella tarda EIB202]
 gi|267985929|gb|ACY85758.1| protein chain release factor B [Edwardsiella tarda EIB202]
          Length = 289

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/280 (59%), Positives = 209/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  + +++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 7   LLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 67  DWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 187 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMEDTKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT++E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 285


>gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
 gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
          Length = 328

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 168/323 (52%), Positives = 221/323 (68%), Gaps = 6/323 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D + W N  +A+ ++ E            ++ D L +  I+ EL   + D +I  E    
Sbjct: 3   DVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYELQQVDFDEAIQTEL--- 59

Query: 92  LQRIK-LEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           +QRIK LE + K +E   LL+G  D N+A +E H GAGGTESQDW +MLLRMY RWAE R
Sbjct: 60  IQRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESR 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S
Sbjct: 120 NFQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + + P +D++IEI+I+  D ++DTYRASGAGGQH+N T+SAVRITHIPT  VV  Q +RS
Sbjct: 180 VDIMPELDETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ QA   L++KLY+LE++K+ + +      + EIGWG QIRSYV  PY MVKD RT
Sbjct: 240 QLKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           N+E  +   V+DG++D+F+ A L
Sbjct: 300 NMETGNVQAVMDGEIDNFIDAYL 322


>gi|91784239|ref|YP_559445.1| peptide chain release factor 2 [Burkholderia xenovorans LB400]
 gi|91688193|gb|ABE31393.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           xenovorans LB400]
          Length = 280

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/277 (56%), Positives = 210/277 (75%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGGTE+ DWA
Sbjct: 1   MAREEGDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR S
Sbjct: 61  AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 121 PFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG QIRS
Sbjct: 181 LPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 241 YVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 276


>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
 gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
          Length = 353

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 164/345 (47%), Positives = 219/345 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GGLFD +     L+        P  W +  +A+ ++     L         + D  
Sbjct: 1   MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +L E+  EE D  + +E  + +Q  + ++   +   LLSGE D NDA LE+H GAG
Sbjct: 61  EELTLLNEMVKEEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDALLEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA+MLLRMY RWA++  ++   L+  +G+EAGIKS TL IKG NAYG+LK E G
Sbjct: 121 GTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+DSN RRHTSF+S+ + PV+D + EIEI ESD  +D +RASGAGGQH+N T
Sbjct: 181 IHRLVRISPFDSNKRRHTSFASVEIMPVLDQNTEIEIDESDIEMDVFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+  A  ML+AKL  L  +K  +  +     K+EI
Sbjct: 241 SSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L
Sbjct: 301 AWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYL 345


>gi|261250316|ref|ZP_05942892.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
 gi|260939432|gb|EEX95418.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
          Length = 263

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 151/260 (58%), Positives = 201/260 (77%), Gaps = 1/260 (0%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++ ++E  +F  + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK
Sbjct: 1   MAELEAKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFK 60

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++
Sbjct: 61  TEVIEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFI 120

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHK
Sbjct: 121 YPEIDDNIQIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 180

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK QA   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E
Sbjct: 181 NKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVE 239

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   VLDGDLD F++A+L
Sbjct: 240 NRNTQAVLDGDLDKFIEASL 259


>gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
 gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
          Length = 338

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/276 (56%), Positives = 202/276 (73%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE D ++ +E    +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +ML
Sbjct: 60  EEPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSML 119

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMYTRWAE+  ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+D
Sbjct: 120 LRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFD 179

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  RRHTSF S+ V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PT
Sbjct: 180 SAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPT 239

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV 
Sbjct: 240 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVF 299

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            PY MVKD RTN+E  +   V+DGDLD F+   L +
Sbjct: 300 HPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 335


>gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF4000_15H13]
          Length = 328

 Score =  327 bits (837), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 153/253 (60%), Positives = 195/253 (77%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  +  ++L G+ D   A + +H GAGGTESQDWA ML+RMYTRWAE+  F    L++ 
Sbjct: 70  VEALELRTMLQGDDDHRGAIITIHPGAGGTESQDWAQMLVRMYTRWAERGGFTVNVLDLQ 129

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
             EEAGIKSATL I G +AYG+LK E GVHRLVRISP+D+ +RRHTSF+S+++YP VDDS
Sbjct: 130 PAEEAGIKSATLEINGESAYGFLKAEGGVHRLVRISPFDAQARRHTSFASVFIYPQVDDS 189

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEIEI++ D R+DTYRASGAGGQHVN TDSAVR+TH PTG+VVQCQQERSQHKN+A A  
Sbjct: 190 IEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQQERSQHKNRATAMK 249

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           ML A+LY+  L+++++   + E+SK +IG+G QIRSYV QPY MV D RT ++ T    V
Sbjct: 250 MLLARLYQHALEEKKKERAVLEASKRDIGFGNQIRSYVFQPYTMVNDHRTELKITDVQSV 309

Query: 339 LDGDLDDFMKATL 351
           +DG +D F++A L
Sbjct: 310 MDGAIDPFIEAYL 322


>gi|323706500|ref|ZP_08118060.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534162|gb|EGB23953.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 327

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 224/323 (69%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W ++ + + L ++++ L   IS  + ++ +  D   L+EL LEE D S+ QE  + 
Sbjct: 3   EPDFWNDLEKFQELSKKQKDLKEIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVHEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + +  ++   + ++LLSG  D N+A L +HAGAGGTE+QDW  MLLRMY RWA  + + 
Sbjct: 63  YKALSKKINDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKNYD 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G++AG+KS T+++KGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ + V
Sbjct: 123 VETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD I+++I   D +IDTYR+SGAGGQHVN T+SA+RITHIPTG++VQCQ ERSQ +
Sbjct: 183 LPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQTERSQMQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML+AKL ++ +++++E     +    E GWG QIRSYV QPY +VKD RTN E
Sbjct: 243 NRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYTLVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             + + V+DG++DDF+ A L  K
Sbjct: 303 VGNVNAVMDGEIDDFINAYLKQK 325


>gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 329

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 162/319 (50%), Positives = 216/319 (67%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ LM E   L + +     ++ RL D    +ELA E DD  + +E  +  
Sbjct: 4   PDFWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLGREAVEEF 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            R +  +   +  +LL+G  D    Y+ +HAGAGGTE+ DWA+MLLRMY RW E+R F  
Sbjct: 64  ARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWCERRGFSV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             LE  DG++AGI+S TL + G  AYG+LK E+G+HRLVRISP+DS  +RHTSF+S+   
Sbjct: 124 TYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTSFASLDAT 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P V DSI IEI + D ++DTYR+ G GGQ+VN  ++AVRITHIP+GV+V CQ ERSQ +N
Sbjct: 184 PEVSDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQNERSQLRN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           K +A NMLRAKLY++E  K++  A+   S K +IGWG QIRSYV QPYQMVKDLRT +E 
Sbjct: 244 KEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQMVKDLRTGVES 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +  DV+DG+LD F++A L
Sbjct: 304 GNIQDVMDGNLDPFIEAML 322


>gi|325474491|gb|EGC77678.1| peptide chain release factor 2 [Treponema denticola F0402]
          Length = 320

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 163/309 (52%), Positives = 211/309 (68%), Gaps = 1/309 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M E + L N I   +E+ D + D  +L+EL+ E  +  + +E   N   +  + +     
Sbjct: 1   MGEIKALKNRIYPWQELMDEVSDLEVLMELSEESGNEELSEEIGSNYNSVYEKYKKLSIL 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGE D NDAYL VHAGAGGTE+ DWA ML+RMY RW E R FKTE +++ + E  GI
Sbjct: 61  SLLSGEVDKNDAYLTVHAGAGGTEACDWAGMLVRMYLRWCESRGFKTETIDVVEAE-GGI 119

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT  I G  A+G LK E G+HRLVRISP+DSN RRHTSF+S++ +PV+DD+IE++I  
Sbjct: 120 KSATFQISGEFAFGLLKSETGIHRLVRISPFDSNGRRHTSFTSVFAFPVLDDTIEVDIRP 179

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRA GAGGQHVN TDSAVRITHIPTG+VV CQ +RSQ  N+A A N+L+++LY
Sbjct: 180 EDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQTQRSQISNRATAMNVLKSRLY 239

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
               +++E+      + K  I WG QIRSYV QPY MVKD RT  E  +   V+DGD+D+
Sbjct: 240 NYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDE 299

Query: 346 FMKATLAIK 354
           F+ + L  K
Sbjct: 300 FINSFLNTK 308


>gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
 gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
          Length = 366

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 167/350 (47%), Positives = 231/350 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L G        +R+  L  +   P  W +  +A+ + +E  +L   +     
Sbjct: 12  QLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTEVETYHG 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D   L E+A+EE D S+  E  + ++  +  +   +   LLS + D+N+A L +
Sbjct: 72  LAAKLDDVETLWEMAMEEKDDSLQGEIEEEVENARKTLADLELGMLLSDQYDANNAILTL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW NMLLRMYTR+AE++ F  E L++  GEEAGIKSATL ++G NAYG+L
Sbjct: 132 HAGAGGTEAQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTVQGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N+RRHTSF+++ V P +D+++E+ ++  D R+D YRASGAGGQ
Sbjct: 192 KSEKGVHRLVRISPFDANARRHTSFAAVDVMPELDETVEVNLNMDDVRVDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVR+THIPTG+VVQCQ ERSQ +NK +   +LRAKLYE E   +++  +    
Sbjct: 252 HVNKTSSAVRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               I WG QIRSYV QPY MVKD RT  E  +   V+DGDLD F++A L
Sbjct: 312 DYQAIEWGSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYL 361


>gi|170694748|ref|ZP_02885899.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
 gi|170140379|gb|EDT08556.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
          Length = 280

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/277 (56%), Positives = 210/277 (75%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ AGAGGTE+ DWA
Sbjct: 1   MAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR S
Sbjct: 61  AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+  RHTSFSS++VYP VDDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 121 PFDSSGGRHTSFSSVFVYPEVDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG QIRS
Sbjct: 181 MPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRTN+E ++   VLDGDLD F+ A+L
Sbjct: 241 YVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 276


>gi|212637017|ref|YP_002313542.1| peptide chain release factor 2 [Shewanella piezotolerans WP3]
 gi|212558501|gb|ACJ30955.1| Peptide chain release factor 2 [Shewanella piezotolerans WP3]
          Length = 293

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/280 (55%), Positives = 204/280 (72%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EEDD     + S  L  ++  +E  +F  + SG  D+ D YL++ +G+GGTE+Q
Sbjct: 11  LLELAVEEDDEETFNDASAELDDLEKRLEELEFRRMFSGPHDAADCYLDIQSGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANM+LRM+ RW E   +K E +E+ DG+ AGIK AT+   G  A+G L+ E GVHRLV
Sbjct: 71  DWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+R
Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ ++       E +K++IGWG Q
Sbjct: 191 ITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLRQNADKQAAEDAKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289


>gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 332

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 160/319 (50%), Positives = 213/319 (66%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ L+ +   L         ++D+L D    +EL  E  D  + +E    L
Sbjct: 4   PDFWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDDLQKELDQKL 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            +++ ++E  +   LLSG  D+N+A LE+H GAGGTE+QDW  MLLRMY RWA++  F  
Sbjct: 64  PQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRWADQHSFDV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E      GEEAGIKS TLLIKG NA+G+L  E+GVHRLVRISP+D+  RRHTSF+S+ V 
Sbjct: 124 ETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHTSFASVDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +D+S+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ +N
Sbjct: 184 PELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQAERSQLQN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD RT  E 
Sbjct: 244 RVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYTLVKDNRTGYET 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
                V+DGDLD F+ A L
Sbjct: 304 HDGQSVMDGDLDPFINAYL 322


>gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
 gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
          Length = 327

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 170/326 (52%), Positives = 235/326 (72%), Gaps = 2/326 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++ + W N+ +A+ + +E + L + I      ++RL D  +L+E+++EEDD S ++E  +
Sbjct: 2   QESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLIEISIEEDDESSVEEILN 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            ++ +K+ ++  + + LLSGE D N+A + +HAGAGGT++QDW  MLLRMYTRWAE + +
Sbjct: 62  EIKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEAKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ 
Sbjct: 122 KVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLE 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + +S +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ 
Sbjct: 182 VLPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQF 241

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           +NK  A +ML++KL EL E   +E+I ++    K EIGWG QIRSYV QPY MVKD RTN
Sbjct: 242 QNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E T+   V+DGD+D F+   L + K
Sbjct: 301 TEMTNVDAVMDGDIDIFIVEYLKVNK 326


>gi|332381658|gb|AEE66505.1| peptide chain release factor 2 [Bordetella pertussis CS]
          Length = 293

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 154/286 (53%), Positives = 216/286 (75%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D+  L+ELAL + D + L+    +  R + ++E  +F  + +  AD  + ++++ AGA
Sbjct: 5   LADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGA 64

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ E 
Sbjct: 65  GGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTET 124

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+N 
Sbjct: 125 GVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINK 184

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT+
Sbjct: 185 TDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTD 244

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 245 VGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 289


>gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
 gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
          Length = 327

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/282 (55%), Positives = 204/282 (72%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++++  EE D  + +E    +  +  ++   +   LL G  D N+A +E+H GAGGTESQ
Sbjct: 43  MVDMLQEEPDAVMQEEAETRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW +MLLRMYTRWAE+  ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLV
Sbjct: 103 DWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLV 162

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS  RRHTSF S+ V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVR
Sbjct: 163 RISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVR 222

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PTG VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG Q
Sbjct: 223 ITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQ 282

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYV  PY MVKD RTN+E  +   V+DGDLD F+   L +
Sbjct: 283 IRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 324


>gi|172058432|ref|YP_001814892.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
 gi|229576666|sp|B1YLH0|RF2_EXIS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171990953|gb|ACB61875.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
          Length = 366

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 167/351 (47%), Positives = 231/351 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++L+      D +  + R+  L  +   P  W N   A+ ++ E   L   +   + +
Sbjct: 13  MEKKLDEYKASLDLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D   + ++  EL  EE D  + +E    L  IK + +  + + LL+GE D+N+A LE+H
Sbjct: 73  ADGHENIVLTYELIKEEPDVELQEELESELGDIKKKFDEFELQILLNGEYDANNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY R+ +K+ +K E ++   G+EAG+KS TL I+G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRLVRISP+DS+ RRHTSF S  V P  +D I+IEI   D R+DTYRASGAGGQH
Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PTGVVV CQQERSQ KN+  A  ML+AKLY+ E++++++  +     
Sbjct: 253 INTTDSAVRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++I WG QIRSYV  PY MVKD RTN E  +    +DGD+  F+ A L +
Sbjct: 313 KSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLRL 363


>gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
 gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
          Length = 327

 Score =  326 bits (835), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/276 (56%), Positives = 202/276 (73%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE D ++ +E    +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +ML
Sbjct: 49  EEPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSML 108

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMYTRWAE+  ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+D
Sbjct: 109 LRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFD 168

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  RRHTSF S+ V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PT
Sbjct: 169 SAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPT 228

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV 
Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVF 288

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            PY MVKD RTN+E  +   V+DGDLD F+   L +
Sbjct: 289 HPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 324


>gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
          Length = 327

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 163/317 (51%), Positives = 215/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDKDLHEELESEVKS 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D ++DTYRASGAGGQHVNTTDSAVRITHIPT  +V CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
 gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
          Length = 365

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 167/354 (47%), Positives = 232/354 (65%), Gaps = 12/354 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS ++  + G+   +N   RL  +     D +LWQ++ +A  + +E+  + N ++     
Sbjct: 13  LSIKVENIAGVVKPENIKARLKEIEELENDQNLWQDIAKAGAIGKEKTKISNILNKFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAY 118
           ++ + D   L ELA  E+D    +ET ++L     E+E K    +   +LSGE D  +A 
Sbjct: 73  KNAVDDAKALYELANSEND----EETINSLFAEADELEDKIINLEISMMLSGENDDKNAI 128

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + +H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + +++G NAY
Sbjct: 129 VSIHPGAGGTESNDWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSFIVRGENAY 188

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E G+HRLVR+SP+DS  RRHTSFSS+ V P ++D IEI I E D R+D +RASGA
Sbjct: 189 GYLKAENGIHRLVRVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRVDVFRASGA 248

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIAN 297
           GGQH+N T+SAVRITHIPTG+VV CQ +RSQHKNK  A  +L+++LYELEL K RE+  N
Sbjct: 249 GGQHINKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELMKQREKDEN 308

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L
Sbjct: 309 ---APKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVL 359


>gi|30961857|gb|AAP40012.1| peptide chain release factor-2 [Citrobacter freundii]
          Length = 293

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|15602055|ref|NP_245127.1| peptide chain release factor 2 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12720411|gb|AAK02274.1| PrfB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 320

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 168/317 (52%), Positives = 228/317 (71%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W    +A+ L +ER  L+  ++ I  +   L D   LLELA+E +D +   E    L+ 
Sbjct: 1   MWNEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELAIEAEDEATFHEAVAELEE 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE 
Sbjct: 61  LEQQLAKLEFRRMFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ DG+ AGIKSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP 
Sbjct: 121 MEVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK 
Sbjct: 181 IDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           Q    L+AKLYE+ELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 QCMKQLKAKLYEMELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQAVLDGDLDRFIEASL 316


>gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 369

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 162/353 (45%), Positives = 227/353 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  L  LG     +  + R+S L  +T++P  W +  +A+ +  +   L   +   + +
Sbjct: 14  MTEPLKDLGKALYIEPTLDRISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q    D   L++L  EE+D +++ E        K      + ++LL GE D N+  L +H
Sbjct: 74  QKEFDDIDTLIDLGQEENDGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  ML RMYTRWAE   ++ + L+I DG+EAG+KS +  I G NAYG+++
Sbjct: 134 AGAGGTEAQDWTEMLYRMYTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D++ RRHTSF+S+ V P +D+SI+I I+  D RID YR+SGAGGQH
Sbjct: 194 SEMGVHRLVRISPFDASGRRHTSFASVEVLPELDNSIQININPDDLRIDRYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTGVVV CQ ERSQ +N+  A NML++KL+ L    + +  +  + +
Sbjct: 254 VNKTESAIRITHIPTGVVVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + +I WG QIRSYV  PY MVKD RTN E T    V+DGDLD F+ A L+  K
Sbjct: 314 QMDIAWGSQIRSYVFCPYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLSQGK 366


>gi|229823414|ref|ZP_04449483.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
 gi|229787189|gb|EEP23303.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
          Length = 331

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 168/320 (52%), Positives = 227/320 (70%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ ++ +        S I  +++ + D  + LEL  E +D  IL E    +
Sbjct: 4   PDFWDDNEKAQKIISQLNLAKETYSTIHALEEGVADIEVALELYDESEDADILAEAEGQV 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            +++ +++  + + LLSG  D+N+A LE+H GAGGTESQDW +MLLRMY RWA+K+ FK 
Sbjct: 64  AQVQADLDAYEMKLLLSGPHDANNAILEIHPGAGGTESQDWGSMLLRMYQRWADKQGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             L+  DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+DSNSRRHTSF+S+ V 
Sbjct: 124 TVLDYQDGEEAGIKSVTLEIEGHNAYGYLKSEKGVHRLVRISPFDSNSRRHTSFASVEVT 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P++DD+IEI+I+  D RIDTYRASGAGGQH+N T SA+RITHIPTG+V Q Q +RSQ +N
Sbjct: 184 PMLDDTIEIDINPDDLRIDTYRASGAGGQHINKTSSAIRITHIPTGIVTQSQSQRSQFQN 243

Query: 273 KAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +  A  ML+AKLY+LE + K +E+A + +  + +I WG QIRSYV  PY MVKD RT+ E
Sbjct: 244 RDLAMAMLKAKLYQLEEENKAKELAAL-KGEQKDIAWGSQIRSYVFHPYAMVKDHRTSYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDL+ F+ A L
Sbjct: 303 VGNTGAVMDGDLNGFIDAYL 322


>gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
 gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
          Length = 334

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 162/321 (50%), Positives = 218/321 (67%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W +   ++  M+  + L + +     ++++  +   L+E+A EE+D S++ E  +
Sbjct: 2   EEPDFWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYEENDASLILEIQE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L       E  +  +LLSGE D NDA + +HAGAGGTES DWA ML RMYTRWA+K+ +
Sbjct: 62  TLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRWADKKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DGEEAGIKS T  ++G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++IEI E D RIDTYR+SGAGGQH+N T SAVRITH+PT +VVQCQ ERSQ 
Sbjct: 182 VMPDIEEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKLY L+ Q+  E  +       EIGWG QIRSYV+QPY MVKD RTN 
Sbjct: 242 QNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYTMVKDHRTNA 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG++D F+ A L
Sbjct: 302 ETGNVDSVMDGNIDLFINAYL 322


>gi|293394608|ref|ZP_06638902.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
 gi|291422917|gb|EFE96152.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
          Length = 248

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 155/245 (63%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS++VYP VD+ I+I+I+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFVYPEVDEDIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL   + +KDLRTN+E  +   VLDGDLD F
Sbjct: 181 YEMQKKNADKQALEDNKSDIGWGSQIRSYVLDDSR-IKDLRTNVETRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|283835350|ref|ZP_06355091.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
 gi|291068515|gb|EFE06624.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
          Length = 293

 Score =  325 bits (834), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG Q
Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289


>gi|156973278|ref|YP_001444185.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
 gi|156524872|gb|ABU69958.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
          Length = 260

 Score =  325 bits (834), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 152/254 (59%), Positives = 196/254 (77%), Gaps = 1/254 (0%)

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E +E+
Sbjct: 4   KLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEVIEV 63

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D+
Sbjct: 64  SEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDE 123

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           +I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA 
Sbjct: 124 NIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAM 183

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LRAKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   
Sbjct: 184 KQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQA 242

Query: 338 VLDGDLDDFMKATL 351
           VLDGDLD F+ A+L
Sbjct: 243 VLDGDLDKFIGASL 256


>gi|237800110|ref|ZP_04588571.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|257487126|ref|ZP_05641167.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|320323152|gb|EFW79241.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329576|gb|EFW85565.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330867549|gb|EGH02258.1| peptide chain release factor 2 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330872776|gb|EGH06925.1| peptide chain release factor 2 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330878328|gb|EGH12477.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330894559|gb|EGH27220.1| peptide chain release factor 2 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330959166|gb|EGH59426.1| peptide chain release factor 2 [Pseudomonas syringae pv. maculicola
           str. ES4326]
 gi|330964102|gb|EGH64362.1| peptide chain release factor 2 [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|330985076|gb|EGH83179.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331009249|gb|EGH89305.1| peptide chain release factor 2 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331022966|gb|EGI03023.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 248

 Score =  325 bits (834), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 154/245 (62%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ S
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QKR   +   E +K++IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D++
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEY 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 LIASL 244


>gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 368

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 165/345 (47%), Positives = 231/345 (66%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +G   D ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     +  +  D 
Sbjct: 19  MGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDL 78

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +HAG+GGTE
Sbjct: 79  STLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTE 138

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHR
Sbjct: 139 AQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHR 198

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SA
Sbjct: 199 LVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESA 258

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     +    E  WG
Sbjct: 259 VRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWG 318

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 319 NQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|310644311|ref|YP_003949070.1| protein chain release factor b-like protein [Paenibacillus polymyxa
           SC2]
 gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa
           SC2]
          Length = 339

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 164/323 (50%), Positives = 227/323 (70%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K   P  W +  +A+ ++ E   + +++   ++++    D  +++ELA EE D +++ E 
Sbjct: 8   KMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGDEALVGEV 67

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            ++++ +  ++E  + + LL+   D  +A LE+H GAGGTESQDW  MLLRMYTRW EKR
Sbjct: 68  ENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWGEKR 127

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 128 GFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P + D ++IEI   D +IDTYRASGAGGQH+NTTDSAVRITH+PTG+VV CQ ERS
Sbjct: 188 CDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVVTCQNERS 247

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ +A  MLR+KLYE +++++++  +     +++I WG QIRSYV  PY MVKD RT
Sbjct: 248 QIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRT 307

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           ++E  +   V+DGDLD F+   L
Sbjct: 308 SVETGNVGAVMDGDLDPFIDGYL 330


>gi|189218067|ref|YP_001938709.1| protein chain release factor B [Methylacidiphilum infernorum V4]
 gi|189184925|gb|ACD82110.1| Protein chain release factor B [Methylacidiphilum infernorum V4]
          Length = 337

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 173/324 (53%), Positives = 220/324 (67%), Gaps = 2/324 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  WQ   +A+  +   + L    S  K + +R  D   L +L  E +D S+ +E    +
Sbjct: 4   PSFWQTPEKAEKALSRSKELKAKFSDYKTLVNRFKDIEALYDLLQESEDPSLEKELEQEI 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
                 ++  + + +LS   D  +A L VH+GAGGTE+ DWA MLLRMY R+AE+  FK 
Sbjct: 64  NAYSDLLDSIEVKLVLSDPMDQKNAILSVHSGAGGTEACDWAAMLLRMYQRYAERHGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             ++I  GEEAGIKSA+LLI G  AYG+LK E+GVHRLVRISP+++  +R TSF+S+ V 
Sbjct: 124 SLIDILPGEEAGIKSASLLISGSYAYGYLKAERGVHRLVRISPFNAQGKRQTSFASVDVV 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
             VD+SIEIEI ESD RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +N
Sbjct: 184 AEVDESIEIEIKESDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVVCQNERSQIQN 243

Query: 273 KAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           KA A  +LR++LYELE  +KR E+  I    K EIGWGRQIRSYVLQPY+MVKDLRT + 
Sbjct: 244 KATAMKILRSRLYELEKDKKRAEMERI-YGQKGEIGWGRQIRSYVLQPYKMVKDLRTGVT 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
           KT   +VLDGDLD F+ A L  KK
Sbjct: 303 KTQVEEVLDGDLDSFIWAYLLGKK 326


>gi|57168993|ref|ZP_00368122.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|305432246|ref|ZP_07401409.1| peptide chain release factor RF2 [Campylobacter coli JV20]
 gi|57019659|gb|EAL56348.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|304444594|gb|EFM37244.1| peptide chain release factor RF2 [Campylobacter coli JV20]
          Length = 365

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1]
 gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1]
 gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 326

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 166/317 (52%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIEI   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|28897286|ref|NP_796891.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839363|ref|ZP_01992030.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308094351|ref|ZP_05888606.2| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308095310|ref|ZP_05904925.2| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308125643|ref|ZP_05776404.2| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
 gi|28805495|dbj|BAC58775.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747111|gb|EDM58099.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308088411|gb|EFO38106.1| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308093009|gb|EFO42704.1| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308113324|gb|EFO50864.1| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
          Length = 260

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 151/249 (60%), Positives = 193/249 (77%), Gaps = 1/249 (0%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE 
Sbjct: 9   EFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEV 68

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I I+
Sbjct: 69  AGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAID 128

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRA
Sbjct: 129 INPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRA 188

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGD
Sbjct: 189 KLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGD 247

Query: 343 LDDFMKATL 351
           LD F++A+L
Sbjct: 248 LDKFIEASL 256


>gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
 gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
          Length = 326

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 213/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L   +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 5   FWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKS 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK + 
Sbjct: 65  LVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVDT 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D IEIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 185 FNDDIEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   N     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 245 HAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 305 VQAVMDGEIDPFIDAYL 321


>gi|297583381|ref|YP_003699161.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
 gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
          Length = 366

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 165/349 (47%), Positives = 232/349 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +L    G  D D    +++ L  +  DP  W N  EA+ ++ E   L +     +E+
Sbjct: 13  MATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSYAHTYREL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +   L  EE+D  ++ +    ++ ++  +   + + LLSG  D+N+A LE+H
Sbjct: 73  EAAHEDLEVQFGLLEEENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYDANNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQD+A+MLLRMYTR+AE+  +K E L+   G+EAG+KS TL I G NAYG LK
Sbjct: 133 PGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQITGHNAYGHLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +++ IEI++   + RIDT+R+SGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTFRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PT  +V CQ ERSQ KN+ +A  ML+AKL++LE++++ + A+     
Sbjct: 253 VNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQRQEADEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDL  F+ A L
Sbjct: 313 QSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYL 361


>gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
 gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
          Length = 386

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 171/353 (48%), Positives = 235/353 (66%), Gaps = 3/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M +   L  LGGLFD +N    +        DP  W +  +A+ ++ +   L + ++   
Sbjct: 26  MNIRITLTKLGGLFDLENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYH 85

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ + + D     EL  EE D  +  E  + + + K +++  + + LL G  D+N+A LE
Sbjct: 86  DLANEVEDMSATRELLQEEYDEDMKAELEEEVIQFKEKMDQYELQLLLDGPHDANNAILE 145

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA+MLLRMY R+ E++ FK E ++   G+EAG+KS TLLIKG NAYG+
Sbjct: 146 LHPGAGGTESQDWASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGY 205

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAG 239
           LK E+GVHRLVRISP+DS+ RRHTSF+S  V P  D D IEIEI+  D  +DT+RASGAG
Sbjct: 206 LKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAG 265

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI 298
           GQH+N T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML++KLY+L+L+++E E+A I
Sbjct: 266 GQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEI 325

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               + EIGWG QIRSYV  PY MVKD RTN E      V+DG+++ F++A L
Sbjct: 326 -RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYL 377


>gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
 gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
          Length = 329

 Score =  325 bits (833), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 166/323 (51%), Positives = 219/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E            ++ +   +  +LLE+  EE D  +  E ++ 
Sbjct: 3   DPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQEEPDAEMEAELAER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q +  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  ++
Sbjct: 63  IQALNEKMGTYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHGYQ 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D +I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ K
Sbjct: 183 MPELDGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDLD F+ A L +K
Sbjct: 303 TGNVQAVMDGDLDGFIDAYLKLK 325


>gi|297171212|gb|ADI22220.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_34B24]
 gi|297171327|gb|ADI22332.1| protein chain release factor B [uncultured actinobacterium
           HF0500_01C15]
          Length = 325

 Score =  325 bits (833), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 156/273 (57%), Positives = 203/273 (74%), Gaps = 10/273 (3%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E++ ++LQ++          VE  + +++L G+ D  +A + +H GAGG ESQDWA ML+
Sbjct: 60  EEELAVLQKS----------VEALELKTMLRGDEDHREAIVTLHPGAGGLESQDWAQMLM 109

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+R F+   L++   +EAGIKSATL IKG + YG+LK E+GVHRLVRISP+D+
Sbjct: 110 RMYTRWAERRGFQVNVLDLQPAQEAGIKSATLEIKGESVYGYLKAERGVHRLVRISPFDA 169

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            SRRHTSF+S++VYP+V+D IE+EI+E+D RIDTYRASGAGGQHVN TDSAVRITH PT 
Sbjct: 170 QSRRHTSFTSVFVYPLVEDDIEVEINEADLRIDTYRASGAGGQHVNKTDSAVRITHEPTN 229

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQQERSQHKN++ A  MLRA LY+  L+++E+     E SK +IG+G QIRSYV Q
Sbjct: 230 IVVSCQQERSQHKNRSTAMKMLRAALYQRALEEKEKEKAAIEESKADIGFGSQIRSYVFQ 289

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY MV D RT  +      V+DGDLD  ++A L
Sbjct: 290 PYTMVNDHRTETKIGDVHGVMDGDLDPLIEAYL 322


>gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 326

 Score =  325 bits (833), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 215/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A++++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQVVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|254229664|ref|ZP_04923074.1| Protein chain release factor B [Vibrio sp. Ex25]
 gi|151937785|gb|EDN56633.1| Protein chain release factor B [Vibrio sp. Ex25]
          Length = 248

 Score =  325 bits (833), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 153/245 (62%), Positives = 192/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I+I+I+ S
Sbjct: 61  SATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
 gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
          Length = 368

 Score =  325 bits (832), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 165/349 (47%), Positives = 233/349 (66%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           ++  +G   D ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     +  +
Sbjct: 15  EIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSK 74

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D   L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +HAG+
Sbjct: 75  WEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGS 134

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+LK E 
Sbjct: 135 GGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEA 194

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ+VN 
Sbjct: 195 GVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNK 254

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     +    E
Sbjct: 255 TESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHRE 314

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             WG QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 315 AAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|269959607|ref|ZP_06173988.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
 gi|269835665|gb|EEZ89743.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
          Length = 260

 Score =  325 bits (832), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 152/254 (59%), Positives = 195/254 (76%), Gaps = 1/254 (0%)

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+
Sbjct: 4   KLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEV 63

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D+
Sbjct: 64  SEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDE 123

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           +I I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA 
Sbjct: 124 NIAIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAM 183

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LRAKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   
Sbjct: 184 KQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQA 242

Query: 338 VLDGDLDDFMKATL 351
           VLDGDLD F++A+L
Sbjct: 243 VLDGDLDKFIEASL 256


>gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  325 bits (832), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 227/340 (66%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   V RL  L+ +   P LW N + A  + RE   L   +  +K ++  L +++ ++
Sbjct: 121 LQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLEHIDMV 180

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV AGAGGTES DW
Sbjct: 181 KLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDW 240

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K E GVHRLVRI
Sbjct: 241 AAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRI 300

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ +RA GAGGQHVNTT+SAVRI
Sbjct: 301 SPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRI 360

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      S T+I WG QI
Sbjct: 361 VHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQI 420

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 421 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 460


>gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579]
 gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
           ATCC 14579]
          Length = 325

 Score =  325 bits (832), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 5   FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 65  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 185 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 245 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 305 VQAVMDGEIDPFIDAYL 321


>gi|68249758|ref|YP_248870.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|68057957|gb|AAX88210.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|301169953|emb|CBW29557.1| peptide chain release factor 2 [Haemophilus influenzae 10810]
          Length = 283

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 161/280 (57%), Positives = 211/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+GGTE+Q
Sbjct: 1   MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLV
Sbjct: 61  DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++IGWG Q
Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 241 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 279


>gi|225450605|ref|XP_002277995.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 434

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 227/340 (66%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   V RL  L+ +   P LW N + A  + RE   L   +  +K ++  L +++ ++
Sbjct: 83  LQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLEHIDMV 142

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV AGAGGTES DW
Sbjct: 143 KLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDW 202

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K E GVHRLVRI
Sbjct: 203 AAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRI 262

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ +RA GAGGQHVNTT+SAVRI
Sbjct: 263 SPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRI 322

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      S T+I WG QI
Sbjct: 323 VHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQI 382

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 383 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 422


>gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
 gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
          Length = 327

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKS 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
          Length = 327

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 213/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L   +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKS 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK + 
Sbjct: 66  LVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVDT 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D IEIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDDIEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   N     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L]
 gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al
           Hakam]
 gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus anthracis CI]
 gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L]
 gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus
           thuringiensis str. Al Hakam]
 gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
           str. CI]
          Length = 326

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 344

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 164/344 (47%), Positives = 234/344 (68%), Gaps = 3/344 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   ++LS L  + ++   W +   A+ + +E + + + I  ++ +Q +L D  +L
Sbjct: 3   LFDKEYLEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E+ +++DD     E  +N++ I+ E++    E LLSGE D N+A L +H G GGT++ D
Sbjct: 63  KEM-MDDDDEESAYEIINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAND 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  MLLRMYTRW EK+ +K E +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVR
Sbjct: 122 WTEMLLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+S+ V P +    +I+I   D ++DTYRASGAGGQH+N TDSAVRI
Sbjct: 182 ISPFNANGKRQTSFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQ 311
           THIPTGVVVQCQ ERSQ  NK  A  ML+AKL EL E   +E+I ++    K ++GWG Q
Sbjct: 242 THIPTGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELK-DMGWGSQ 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IRSYV  PY +VKD RTN+E ++ + V+DGDLD F+ + L   K
Sbjct: 301 IRSYVFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLKSSK 344


>gi|222823300|ref|YP_002574873.1| peptide chain release factor 2 [Campylobacter lari RM2100]
 gi|254790909|sp|B9KEY7|RF2_CAMLR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222538521|gb|ACM63622.1| peptide chain release factor 2 [Campylobacter lari RM2100]
          Length = 366

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 170/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  ++  +  +   +    RL  +      P  W +V +A ++ +E+  + N +   + 
Sbjct: 12  KLKNKVGNIASIIKPEEIKARLKEIENLENSPSFWSDVKQAGIIGKEKTKISNLLKNYEN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + L D   L +LA  E+D   +Q   D+   ++  +   +   LLSGE D  +A + +
Sbjct: 72  AFNALNDASELFDLANSENDLDTIQALFDDAPNLEDLIVSLEISMLLSGENDGKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+L
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI + D RID YRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEDKDIRIDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+P+G+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN   S
Sbjct: 252 HVNKTESAVRITHMPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEAN--SS 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+N   +   ++LDGD+   ++  L  +K
Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDTRSNEAFSQVDNILDGDIKKMIEGVLIAQK 363


>gi|283955061|ref|ZP_06372564.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793428|gb|EFC32194.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 366

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 232/349 (66%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   +++ +++  +   +   LLSGE DS +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDVPKLEDTITSLEISMLLSGENDSKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELLKQQDNANAGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
 gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
          Length = 326

 Score =  325 bits (832), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|85059968|ref|YP_455670.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
 gi|84780488|dbj|BAE75265.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
          Length = 289

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 166/282 (58%), Positives = 207/282 (73%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+ EDD     ET   L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE+Q
Sbjct: 7   LLELAVGEDDEETFLETQAELDGLEAKLGQLEFRRMFSGEYDSADCYVDIQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKS T+ + G  AYGWL+ E GVHRLV
Sbjct: 67  DWASMLLRMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKVIGDYAYGWLRTETGVHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT +V QCQ +RSQHKNK QA   L+AKLYE ELQK+       E +K++IGWG Q
Sbjct: 187 ITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFELQKKNAEKKALEDTKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L +
Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNAQSVLDGDLDKFIEASLKV 287


>gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 227/340 (66%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   V RL  L+ +   P LW N + A  + RE   L   +  +K ++  L +++ ++
Sbjct: 75  LQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLEHIDMV 134

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV AGAGGTES DW
Sbjct: 135 KLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDW 194

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K E GVHRLVRI
Sbjct: 195 AAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRI 254

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ +RA GAGGQHVNTT+SAVRI
Sbjct: 255 SPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRI 314

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      S T+I WG QI
Sbjct: 315 VHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQI 374

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 375 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 414


>gi|254513973|ref|ZP_05126034.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
 gi|219676216|gb|EED32581.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
          Length = 280

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 152/277 (54%), Positives = 206/277 (74%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE+D + + +    +Q +   +E  +F  + +GE D+N+A+L++ +G+GGTE+QDWA
Sbjct: 1   MASEENDEAAVSDLELEIQGLLKVLELLEFRRMFNGEMDANNAFLDIQSGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E R F TE +E   G+ AGIKSAT+   G  A+GWL+ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGESRGFTTELIEASGGDVAGIKSATIKFSGEYAFGWLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH
Sbjct: 121 PFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            P+G+VVQCQ ERSQH+N+  A  +LR KLYE+E+ KR     + E +K +IGWG QIRS
Sbjct: 181 NPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEVLKRNAEKQVMEDNKADIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + +KDLRTN+E ++   VLDG +D F++A+L
Sbjct: 241 YVLDASR-IKDLRTNVETSNTQAVLDGAIDQFIEASL 276


>gi|149192200|ref|ZP_01870417.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
 gi|148833958|gb|EDL50978.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
          Length = 248

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW NM+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTNMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+I+I+I+ S
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|167622749|ref|YP_001673043.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
 gi|167352771|gb|ABZ75384.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
          Length = 293

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 154/280 (55%), Positives = 205/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EEDD     + +  LQ ++  +E  +F  + SG  D++D YL++ +G+GGTE+Q
Sbjct: 11  LLELAVEEDDEETFNDAAAELQDLERRLEELEFRRMFSGPHDASDCYLDIQSGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANM+LRM+ RW +   +K E +E+  G+ AGIK AT+   G  A+G L+ E GVHRLV
Sbjct: 71  DWANMVLRMFLRWGDAHDYKPELIEVTGGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+R
Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E +K++IGWG Q
Sbjct: 191 ITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDAKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289


>gi|329124057|ref|ZP_08252604.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
 gi|327467482|gb|EGF12980.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
          Length = 283

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 160/280 (57%), Positives = 212/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E    L  ++ ++E  +F  + SGE D+ + Y+++ AG+GGTE+Q
Sbjct: 1   MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACNCYVDLQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLV
Sbjct: 61  DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+     + E +K++IGWG Q
Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQVMEDNKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 241 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 279


>gi|251792904|ref|YP_003007630.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534297|gb|ACS97543.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
          Length = 289

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 161/280 (57%), Positives = 211/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E +D +   E    L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+Q
Sbjct: 7   LLELAVEAEDEATFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLV
Sbjct: 67  DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++IGWG Q
Sbjct: 187 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 285


>gi|88860263|ref|ZP_01134901.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
 gi|88817461|gb|EAR27278.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
          Length = 260

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/254 (61%), Positives = 195/254 (76%), Gaps = 1/254 (0%)

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++E  +F  + SG+ D NDAYL++ +G+GGTE+QDW N+LLRMY RWA+ + FK E +E 
Sbjct: 4   KLEKLEFRRMFSGDFDQNDAYLDLQSGSGGTEAQDWCNILLRMYLRWADAKGFKAELVEA 63

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            DG+ AGIK AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP +DD
Sbjct: 64  TDGDVAGIKGATVRIVGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEIDD 123

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           +I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNK QA 
Sbjct: 124 NIKIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNERSQHKNKDQAM 183

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             L+AKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT IE  +   
Sbjct: 184 KQLKAKLFELELQKQNAEKQTQEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQA 242

Query: 338 VLDGDLDDFMKATL 351
           VLDGDLD F++A+L
Sbjct: 243 VLDGDLDKFIEASL 256


>gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           SR1/5]
          Length = 332

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 159/321 (49%), Positives = 217/321 (67%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W N   ++M M++ + L + I     ++ ++ D   ++E+  EE+D  I+ E  +
Sbjct: 2   EAPDFWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYEENDPEIVPEIQE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   +   +  + ++LLSGE D  +A ++++AGAGGTE+ DW  ML RMY+RWAEK+ F
Sbjct: 62  MLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWAEKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DG+EAG+KS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 ALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH
Sbjct: 182 VMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NK +A  ML+AKLY L+ Q+ EE  +      T+IGWG QIRSYVLQPY MVKD RTN 
Sbjct: 242 MNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYTMVKDHRTNE 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDG +D F+ A L
Sbjct: 302 ETGNVDAVLDGGIDIFINAYL 322


>gi|325291337|ref|YP_004267518.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 371

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/319 (49%), Positives = 219/319 (68%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ +M+E     + ++   E++    D  +L ++A+EEDD S+  E   ++
Sbjct: 42  PDFWDDRSNAQKIMQELTGNKDKVALFGELKTETEDLEVLWQMAMEEDDSSLEDEIVKDI 101

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            RI+ + +  + E LLSGE D N+A + +H+GAGGTE+QDW  ML RMY RW E+R++K 
Sbjct: 102 HRIRAQYDELELEILLSGEYDRNNAIITLHSGAGGTEAQDWVQMLYRMYLRWGERRRYKV 161

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L++  GEEAGIKS T  + G NA+G+ K E+GVHRLVRISP+DS+ RRHTSF+S+ V 
Sbjct: 162 ETLDLLPGEEAGIKSVTFSLAGENAFGYAKCEKGVHRLVRISPFDSSGRRHTSFASVDVI 221

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P V++ +EI I   D ++DTYR+ GAGGQHVN TDSAVRITHIP+G++VQCQ ERSQ +N
Sbjct: 222 PEVNEDMEINIDSEDLKVDTYRSGGAGGQHVNKTDSAVRITHIPSGIIVQCQSERSQIQN 281

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +A    +L+AKL EL+ +++EE          +I WG QIRSYV  PY MVKD RTN E 
Sbjct: 282 RAYCMRILQAKLLELKRKQQEEELLEIRGELNDIAWGSQIRSYVFHPYSMVKDHRTNTET 341

Query: 333 TSPSDVLDGDLDDFMKATL 351
            + + V+DG++D F+ A L
Sbjct: 342 GNVNSVMDGEIDLFISAYL 360


>gi|308126586|ref|ZP_05911115.2| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
 gi|308107642|gb|EFO45182.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
          Length = 260

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/249 (60%), Positives = 193/249 (77%), Gaps = 1/249 (0%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F  + SG+ D++D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE 
Sbjct: 9   EFRRMFSGDHDNSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEV 68

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I I+
Sbjct: 69  AGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAID 128

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRA
Sbjct: 129 INPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRA 188

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGD
Sbjct: 189 KLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGD 247

Query: 343 LDDFMKATL 351
           LD F++A+L
Sbjct: 248 LDKFIEASL 256


>gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803]
 gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803]
          Length = 326

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A++++ E   L   +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQVVINEANALKEMVGKFRKLDETFENLEITHELLKEEYDEDLHEELEAEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|330836506|ref|YP_004411147.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
 gi|329748409|gb|AEC01765.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
          Length = 369

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 162/326 (49%), Positives = 218/326 (66%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  KT  P  W +  +A+    +   L ++    ++++ R+ D   L++L   EDD S++
Sbjct: 35  LEAKTTLPDFWNDKEKAEKTFSDLSSLKDSFFPWRDLKKRIDDVGDLIDLYANEDDESLV 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE    +  I+ E    + ++LLS   D ND +L +HAGAGGTE+ DWA ML+RMY RW 
Sbjct: 95  QELDSQILDIEKEFHPLKVKTLLSQRFDKNDCFLSIHAGAGGTEASDWAAMLMRMYLRWC 154

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK+E L++ + +E GIKS T+ + G  A+G+LKGE GVHRLVRISP+DS  RRHTS
Sbjct: 155 ERNGFKSEILDMQE-DEGGIKSTTIRVSGQYAFGYLKGEAGVHRLVRISPFDSQKRRHTS 213

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++  PV+DD IEI+I   D R+DTYRA GAGGQHVN TDSAVRITH  +G+VVQCQ 
Sbjct: 214 FTSVYASPVIDDEIEIDIKPEDIRLDTYRAGGAGGQHVNKTDSAVRITHFESGIVVQCQN 273

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  NK  A+ MLR++LYE   +K+E+       +K  I WG QIRSYV QPY MVKD
Sbjct: 274 ERSQFMNKEVAFKMLRSRLYEYYKEKQEQEHQKTAIAKKGITWGSQIRSYVFQPYTMVKD 333

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN +  +   V+DGD+DDF++  L
Sbjct: 334 HRTNCQVGNIQAVMDGDIDDFIEQFL 359


>gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
 gi|166977372|sp|A8EWG5|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
          Length = 365

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 162/342 (47%), Positives = 224/342 (65%), Gaps = 2/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           + G+   D   +RL  +  +      W +V  A  +  E+  +   ++   +  D L   
Sbjct: 20  IKGILKPDILNKRLEEIKNEEASQDFWNDVENATKIGIEKNRILGKLNKFNKAFDSLTGT 79

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A  E D   L+   +    ++  ++  +   +LS   DS++A + +H GAGGTE
Sbjct: 80  NELYEMATAEKDDETLEMLYEEASDLENLIKSTEISVMLSNPDDSSNAIVSIHPGAGGTE 139

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWA++L RMY RWAE+  FK E L+   G+EAGIK  + +IKG NAYG++K E G+HR
Sbjct: 140 SQDWASILYRMYLRWAERNDFKVELLDYQAGDEAGIKDVSFIIKGENAYGYMKAENGIHR 199

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DSN++RHTSFSS+ V P +DD+I I I + D RIDTYRASGAGGQHVN T+SA
Sbjct: 200 LVRISPFDSNAKRHTSFSSVMVSPEIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESA 259

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITHIPTG+VVQCQ +RSQHKNK  A+ ML+++LYE EL+K+   A+     K++ GWG
Sbjct: 260 IRITHIPTGIVVQCQNDRSQHKNKDSAFKMLKSRLYEYELEKQR--ASKDGIEKSDNGWG 317

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVLQPYQ VKD R+NI  ++   +LDGD+   ++  L
Sbjct: 318 HQIRSYVLQPYQQVKDSRSNIGYSNVDAILDGDITKMIEDVL 359


>gi|86152591|ref|ZP_01070796.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843476|gb|EAQ60686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 365

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASGLFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
 gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
          Length = 326

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 163/317 (51%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQTVINEANALKDMVGSFRQLDETFENLEMTHELLKEEYDEDLHEELESEVKT 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
 gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
          Length = 326

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 213/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
 gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
          Length = 372

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 162/344 (47%), Positives = 226/344 (65%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           + +N  GG+FD   + +RL  +      P  W        ++RE+  L+  ++    +  
Sbjct: 16  QNMNPSGGVFDHAQSKERLEEIEHDLSKPGAWDKPDALTPVLREKSMLEEKVTSYDNLTS 75

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              D    L +A E+ D  IL+  S+N++++   VE  +  +LLSG  D + A LE+H G
Sbjct: 76  SKDDVEEWLMMASEDQDQEILEALSENVEKLAKLVEQTELAALLSGPEDKSTAILEIHPG 135

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG ESQDWA MLLRMY RWA+KR +KT  L+    +EAGIKS TL I+G  AYG+LKGE
Sbjct: 136 AGGIESQDWAEMLLRMYLRWADKRNWKTSYLDYQPDDEAGIKSVTLRIEGLYAYGFLKGE 195

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRL+RISP+D++ RRHTSF+S+ VYP +   IEIE+ + D R+D +RASG GGQHVN
Sbjct: 196 AGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIRLDVFRASGPGGQHVN 255

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITH+PT +VVQCQ E+SQ KNK  A  +L+++LYE EL+++EE      ++K 
Sbjct: 256 KTNSAVRITHLPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQELKRQEESKRADYATKD 315

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            IG+G QIR+Y LQPY++VKD R   E  +   VLDG+LD  ++
Sbjct: 316 SIGFGSQIRTYTLQPYRLVKDHRCGAEDGNVEAVLDGELDGLIR 359


>gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
 gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
          Length = 327

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 165/323 (51%), Positives = 219/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E    
Sbjct: 3   DPEFWNDQQKAQTVINEANGLKDYVNSYKKLSESHEELQMTHDLLKEEPDEELQLELVKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK
Sbjct: 63  LKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG++K E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN E
Sbjct: 243 NRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ A L  K
Sbjct: 303 MGNVQAVMDGDIDVFIDAYLRSK 325


>gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
 gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
          Length = 326

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 163/317 (51%), Positives = 214/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 306 VQAVMDGEIDPFIDAYL 322


>gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str.
           A2012]
          Length = 325

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 213/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 5   FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 65  LIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 185 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 245 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 305 VQAVMDGEIDPFIDAYL 321


>gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
 gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
          Length = 326

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 158/321 (49%), Positives = 217/321 (67%), Gaps = 1/321 (0%)

Query: 35  LWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
            WQ +  E   L +ER  L   I   +++  +  D  +L E+ALEE D + L E + +++
Sbjct: 6   FWQRDQEEISRLNQERSALSEQIDTWEDLFRKTEDAALLAEMALEEKDKTTLSEVTRDVE 65

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           R++ E++  +  SLL    D  +A + ++AGAGGTE+QDW  ML RMYTRWAE +  K E
Sbjct: 66  RLEREIKRLELRSLLGKPDDRRNAIVAINAGAGGTEAQDWVEMLFRMYTRWAEAKGMKVE 125

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIK+    + GP AYG+LK E G+HR+VRISP+D+  RRHTSF+S+ V P
Sbjct: 126 VIDFLAGDEAGIKNVDFTVTGPYAYGYLKSEHGIHRMVRISPFDATGRRHTSFASVSVLP 185

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            VD  I IE+ E+D RIDTYRASG GGQHVN T SA+RITH+PT +VVQCQ E+SQH+NK
Sbjct: 186 EVDLDINIEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTKIVVQCQNEKSQHRNK 245

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  +L++KLYELE  K E+       ++ +I WG QIRSYV  PY+MVKD RTN++  
Sbjct: 246 DMAMKVLKSKLYELEKNKLEQKKQEIHDTQKDIAWGSQIRSYVFNPYRMVKDHRTNLDDG 305

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DGD+D+F+ A L +K
Sbjct: 306 NVDKVMDGDIDEFIDAYLRMK 326


>gi|315187113|gb|EFU20870.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           thermophila DSM 6578]
          Length = 364

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 174/357 (48%), Positives = 238/357 (66%), Gaps = 14/357 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK----MLMRERQHLDNAISF 58
           + R+    GG+F+  +  +++S L  +T  P LW +   A+     L R +   +   S 
Sbjct: 1   MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADS 114
           ++E++D       L +LA EE+D S  +E  +  Q++  E E K    +   LL+ E D 
Sbjct: 61  VQEVEDIHT----LYDLAAEENDPSQEEEEEELRQQLA-EAERKFRELRLRELLNEEYDQ 115

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            DAYL +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG
Sbjct: 116 KDAYLTIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKG 174

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+G+LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I   D RIDTYR
Sbjct: 175 DYAFGYLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYR 234

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           + GAGGQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+  A  MLR++LYE   Q REE
Sbjct: 235 SQGAGGQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREE 294

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                   K +I WG QIRSYV QPY MVKDLRT +E  +   V+DGDLD F++A L
Sbjct: 295 EQEKKAIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 351


>gi|283956828|ref|ZP_06374302.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791689|gb|EFC30484.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 365

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIKTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|161524328|ref|YP_001579340.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189350916|ref|YP_001946544.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|160341757|gb|ABX14843.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189334938|dbj|BAG44008.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
          Length = 248

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|121612135|ref|YP_001001104.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005998|ref|ZP_02271756.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166223626|sp|A1W163|RF2_CAMJJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|87249819|gb|EAQ72778.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 365

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDANELFDLANSENDTETLEALFNDASKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3]
 gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3]
          Length = 325

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 213/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L   +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 5   FWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 65  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIEI   D ++DTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 185 FNDEVEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 245 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG++D F+ A L
Sbjct: 305 VQAVMDGEIDPFIDAYL 321


>gi|57238478|ref|YP_179609.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|73621535|sp|Q5HSX6|RF2_CAMJR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57167282|gb|AAW36061.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|315058910|gb|ADT73239.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 365

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|86149455|ref|ZP_01067686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86151896|ref|ZP_01070109.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88596537|ref|ZP_01099774.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148925627|ref|ZP_01809315.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205356111|ref|ZP_03222878.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218563058|ref|YP_002344837.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|315124892|ref|YP_004066896.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|24638160|sp|Q9PMK5|RF2_CAMJE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85840237|gb|EAQ57495.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841004|gb|EAQ58253.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88191378|gb|EAQ95350.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360764|emb|CAL35563.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145845637|gb|EDK22728.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205345954|gb|EDZ32590.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|284926663|gb|ADC29015.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315018614|gb|ADT66707.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315927400|gb|EFV06738.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315930833|gb|EFV09825.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 365

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|157415680|ref|YP_001482936.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047182|sp|A8FNC2|RF2_CAMJ8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157386644|gb|ABV52959.1| peptide chain release factor RF-2 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748321|gb|ADN91591.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315930963|gb|EFV09938.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 365

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAGE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 332

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 162/320 (50%), Positives = 212/320 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +   A+ L+ +   L        ++Q +  +  + LEL  EE D  +      +
Sbjct: 3   DPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFEAD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L++I+ ++   +   LLSGE DSN+A +E+H GAGGTESQDW  MLLRMY RWA+   F 
Sbjct: 63  LEQIQSQMRQYELGQLLSGEYDSNNAIVELHPGAGGTESQDWGAMLLRMYLRWADAHGFT 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAGIKS TL+IKG NAYG L+ E+GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 123 VETEDYQAGEEAGIKSVTLMIKGHNAYGLLRSEKGVHRLVRISPFDSAGRRHTSFCSVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D SI+IE+   D R+D +R+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +
Sbjct: 183 MPELDGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A NML+AKLY+ E +++ + A   +  + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYTMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDLD FM A L
Sbjct: 303 TGNGQAVMDGDLDPFMYAYL 322


>gi|254429259|ref|ZP_05042966.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
 gi|196195428|gb|EDX90387.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
          Length = 356

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 234/349 (67%), Gaps = 8/349 (2%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL+ +  + E+P +W +   A+ L +ER  L+  ++ I +    + D 
Sbjct: 5   LGGIFDYDQKSERLTEVERELENPDVWNDPDYARALGKERAQLEMVVNTINDASQGVEDT 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL+L +EE D   L E   +L+ ++  V   +F  + SG+ D+  AYL++ AG+GGTE
Sbjct: 65  SALLDLVVEEGDEDTLTEVESDLRDLEKMVADLEFRRMFSGQMDACSAYLDIQAGSGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  M+LRMY RW E   FKTE +E   G+ AGIKSAT+  +G  AYGWL+ E GVHR
Sbjct: 125 AQDWGEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATIRFEGEYAYGWLRTETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS++V P VDD I+++I     R+DTYRASGAGGQHVN TDSA
Sbjct: 185 LVRKSPFDSGGRRHTSFSSVFVSPEVDDDIDVDIDVGSMRVDTYRASGAGGQHVNRTDSA 244

Query: 250 VRITHIPTG-------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VR+T+  T        +V QCQ  RSQH+NK QA  M++AK+YE+E+Q+R     + ES+
Sbjct: 245 VRLTYEYTDEGGEKHTLVTQCQSGRSQHQNKDQALKMMQAKVYEVEMQRRNAEKQVQESN 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 305 KSDIGWGSQIRSYVLDDGR-IKDLRTGVESHNTQQVLDGALDQFIEASL 352


>gi|320535245|ref|ZP_08035369.1| peptide chain release factor 2 [Treponema phagedenis F0421]
 gi|320147898|gb|EFW39390.1| peptide chain release factor 2 [Treponema phagedenis F0421]
          Length = 320

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 160/306 (52%), Positives = 212/306 (69%), Gaps = 1/306 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M E + L + +   +E+Q  + D   L +LA E +D  +  E     Q++    E     
Sbjct: 1   MSELKVLRSRVEPWRELQTDIEDLQALYDLAEEAEDEQMTDEIDSVYQKLSERFEKLNVL 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D+NDA+L +HAGAGGTE+ DWA ML RMY RWAE+  +KTE L++ + +  GI
Sbjct: 61  HLLSGEVDANDAFLTIHAGAGGTEACDWAQMLTRMYLRWAERNDYKTETLDMLEAD-GGI 119

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TL + G  A+G+LKGE G+HRLVRISP+DSN+RRHTSF+S++V+PV+DD+IE+EI  
Sbjct: 120 KSITLKVSGEYAFGFLKGENGIHRLVRISPFDSNARRHTSFTSVYVFPVLDDTIEVEIRP 179

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRA GAGGQHVN TDSAVR+TH+PTG+VV CQ ERSQ  N+A A  +L+A+LY
Sbjct: 180 EDLRVDTYRAGGAGGQHVNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMAILKARLY 239

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E   +++E+      + K +I WG QIRSYV QPY MVKD RT  E  +   V+DGD+D 
Sbjct: 240 EYYREEKEKDNQKFAAEKKDISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDG 299

Query: 346 FMKATL 351
           FM+  L
Sbjct: 300 FMEEYL 305


>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
 gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
           prevotii DSM 20548]
          Length = 367

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 165/355 (46%), Positives = 238/355 (67%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++L  +G   D  +  + +  L  ++  P  W +  +A+ +M +     + +S  K++
Sbjct: 14  LSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADLASKKDELSDYKKL 73

Query: 63  QDRLCDNLILLELA--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ L DN  +L+L    EE +   ++E  D+L+ +       +  + L GE D N+AY+ 
Sbjct: 74  ENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQLDGEYDKNNAYIS 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGG E+ DWA+ML RMY R+ +   FK E  ++++ E  GIKSAT+ + GP AYG+
Sbjct: 134 INAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKSATMHVTGPYAYGY 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+DS SRRHTSF+S+ V+P +D++IE++I  SD RIDTYRASGAGG
Sbjct: 194 LKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPELDENIELDIDPSDLRIDTYRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIG 299
           QHVN TDSAVRITHIPTGVV   Q ERSQ +N+  A N+L++KL ++ E ++RE+I +I 
Sbjct: 254 QHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQIKEEEQREKIEDI- 312

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + S ++I WG QIRSYV QPY +VKD RT  E  +   V+DGD+  F+ A LA K
Sbjct: 313 QGSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGFIDAFLADK 367


>gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681]
 gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681]
          Length = 331

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 162/319 (50%), Positives = 224/319 (70%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ ++ E   + +++   ++++    D  ++ ELA EE D ++  E  +++
Sbjct: 4   PDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELADEEGDETLAGEIENSI 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           + +  +++  + + LL+   D  +A LE+H GAGGTESQDW  MLLRMYTRWAEKR FK 
Sbjct: 64  RSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEKRGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V 
Sbjct: 124 ETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVV 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P + D +++EI   D +IDTYRASGAGGQH+NTTDSAVRITH+P+G+VV CQ ERSQ KN
Sbjct: 184 PEIADDVDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVVTCQNERSQIKN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           + QA  MLR+KLYE +++++ +  +     +++I WG QIRSYV  PY MVKD RT++E 
Sbjct: 244 REQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTSVET 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   V+DGDLD F+   L
Sbjct: 304 GNVGAVMDGDLDPFIDGYL 322


>gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
          Length = 352

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 169/344 (49%), Positives = 228/344 (66%), Gaps = 3/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q  + D 
Sbjct: 3   LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGTE
Sbjct: 63  DATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           LVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+S
Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307
           A+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++  E+A I    + EIG
Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 345


>gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073]
 gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella
           thermoacetica ATCC 39073]
          Length = 330

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 160/320 (50%), Positives = 224/320 (70%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W++   A+ + +   +L   ++  +E++ +  D   L +LAL EDD S+ +E + +L
Sbjct: 4   PGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEEIARDL 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++ +VE +   +LL+G  D ++A L +H GAGGTESQDWA MLLRMY RW E R ++ 
Sbjct: 64  AAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRGYQV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+  +GEEAG+KSAT+L+KG NAYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+ V 
Sbjct: 124 ELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASVDVI 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P V+   E+EI+  D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N
Sbjct: 184 PEVEADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQHAN 243

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +  A  +L+A+L  L+ Q++E E+A I    + EI WG QIRSYV  PY +VKD RT +E
Sbjct: 244 RLSAMKILQARLAALKRQEQEAELAQI-RGEQREIAWGSQIRSYVFHPYSLVKDHRTGVE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DG +D F++A L
Sbjct: 303 TGNIQAVMDGQIDPFIQAYL 322


>gi|289675203|ref|ZP_06496093.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           FF5]
 gi|302185552|ref|ZP_07262225.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           642]
 gi|330896019|gb|EGH28242.1| peptide chain release factor 2 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330936871|gb|EGH41012.1| peptide chain release factor 2 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330968992|gb|EGH69058.1| peptide chain release factor 2 [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330975436|gb|EGH75502.1| peptide chain release factor 2 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 248

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 152/245 (62%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK
Sbjct: 1   MFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ +
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QKR   +   E +K++IGWG QIRSYVL   + +KDLRTNIE++    VLDGD+D++
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEY 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 LIASL 244


>gi|254247791|ref|ZP_04941112.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
 gi|124872567|gb|EAY64283.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
          Length = 248

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 149/245 (60%), Positives = 198/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E++KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 VEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
 gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
          Length = 326

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 162/317 (51%), Positives = 216/317 (68%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L + +   +++ +   +  +  +L  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQAVINEANALKDMVGRFRQLDETFENLEMTHDLLKEEYDEDLHEELESEVKT 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR+FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRRFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG+++ F+ A L
Sbjct: 306 VQAVMDGEINPFIDAYL 322


>gi|262198721|ref|YP_003269930.1| hypothetical protein Hoch_5555 [Haliangium ochraceum DSM 14365]
 gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
          Length = 378

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 164/350 (46%), Positives = 230/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  LGG+FD D    R+  L + + DP  W N  +A+  +RE + + + +    +
Sbjct: 22  ELENTLEELGGIFDVDEKRLRIEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDK 81

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D ++LLELA + +D     E     + I+  ++  +F  +LSGE D   A L++
Sbjct: 82  LSSKLADAVVLLELAEDAEDAESAIEARTAAEEIERSLDELEFRRMLSGEYDQGGAVLQI 141

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGG ++ DWA MLLRM  R+A+ + +K E L+    EEAGIKSATL+I G  AYG L
Sbjct: 142 NSGAGGVDAADWAQMLLRMILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLL 201

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+ +RR TSF+++ V P +DDS+ ++I E + RID YRA GAGGQ
Sbjct: 202 KAEMGVHRLVRISPFDAQARRQTSFAAVTVSPDIDDSVHVDIDEGELRIDVYRAGGAGGQ 261

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+P+G+VVQCQ ERSQHKNKA A  +LR++LY+    +R+  A     
Sbjct: 262 HVNKTESAVRITHLPSGIVVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAP 321

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K +I WG QIRSYVL PY+ V D RT+++  +   VLDGDLD F++  L
Sbjct: 322 EKKKIEWGSQIRSYVLAPYRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYL 371


>gi|229827336|ref|ZP_04453405.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
 gi|229788274|gb|EEP24388.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
          Length = 340

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 171/337 (50%), Positives = 222/337 (65%), Gaps = 3/337 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  LN    +P  W N  +A   M E   L N I    E+Q    D   L+E+A EE+D
Sbjct: 2   RLEELNRLISEPGFWDNADKANATMAEISSLKNGIESFDELQTMYDDIGALIEMAEEEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            S++ E  D L+R K E +  +  +LLSG  D ++A + +HAGAGGTE+ DW  +L+R Y
Sbjct: 62  SSMVSEIGDELERFKTEFDTLRISTLLSGPYDKDNAIITLHAGAGGTEACDWTGILMRAY 121

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TRWA+ + FKTE ++   GEEAG+KS T+ I G NAYG+LK E GVHRLVRISP+++  +
Sbjct: 122 TRWADSKGFKTEVIDYLAGEEAGVKSCTIEITGTNAYGYLKSEHGVHRLVRISPFNAAGK 181

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF S  V P +++ I+IEI + D RIDT+RASGAGGQH+N T SA+RITH P+G+VV
Sbjct: 182 RQTSFVSCDVMPDIEEDIDIEIKDEDMRIDTFRASGAGGQHINKTSSAIRITHFPSGIVV 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ +NKA+A  ML+AKLY L  Q+ E         + +I WG QIRSYVLQPY 
Sbjct: 242 SCQNERSQFQNKAKAMQMLKAKLYMLRQQENEAKEAGIRGEQKDIAWGSQIRSYVLQPYT 301

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL---AIKK 355
           MVKD RTN+E  +   VLDG+ D F+ A L   +IKK
Sbjct: 302 MVKDHRTNVEIGNAQTVLDGNFDPFINAYLKWKSIKK 338


>gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
 gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
          Length = 372

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 174/340 (51%), Positives = 230/340 (67%), Gaps = 2/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D DN  +R+  L    E P  W N  +++  M+E + L +A     E++  L D   L+
Sbjct: 25  LDLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELETGLDDVKTLI 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+A E +D S++ E  + +  ++ ++E  + E+LLSGE D+ DA L +HAGAGGTES DW
Sbjct: 85  EMAEESNDQSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHAGAGGTESCDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             ML RMYTRWAE   + TE L+  +GEEAGIKS T+ I+G NAYG LK E GVHRLVRI
Sbjct: 145 CQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKSEHGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++  +R TSF S  V P ++  I+IEI++ D RIDTYR+SGAGGQH+N T SA+RIT
Sbjct: 205 SPFNAAGKRQTSFVSCDVMPDINQDIDIEINDDDLRIDTYRSSGAGGQHINKTSSAIRIT 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312
           H+PTG+VVQCQ ERSQH+NK +A  ML+AKLY L E +  E ++ I    K +I +G QI
Sbjct: 265 HLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIRGDVK-DINFGSQI 323

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYVLQPY MVKD RTN E  +   VLDG++D F+ A L 
Sbjct: 324 RSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLT 363


>gi|254251975|ref|ZP_04945293.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
 gi|124894584|gb|EAY68464.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
          Length = 248

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVTGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|58579040|ref|YP_197252.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617098|ref|YP_196297.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Gardel]
 gi|58416710|emb|CAI27823.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417666|emb|CAI26870.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 251

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 148/249 (59%), Positives = 194/249 (77%), Gaps = 1/249 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGI 165
           + S EAD ND ++E+ +GAGGTES DW+NMLLRMY RWAE    FKT+ +   DGEE G+
Sbjct: 1   MFSDEADQNDCFIEIQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGV 60

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSA + + G NAYGW K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I +
Sbjct: 61  KSAIIKVIGYNAYGWSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHD 120

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N  +A+N+LR++LY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLY 180

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +L+LQ++E+      S + +IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDGDLD 
Sbjct: 181 QLKLQEKEKKMAQEHSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDA 240

Query: 346 FMKATLAIK 354
           F+ ATL  K
Sbjct: 241 FIIATLTKK 249


>gi|254850994|ref|ZP_05240344.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258620333|ref|ZP_05715371.1| peptide chain release factor 2 [Vibrio mimicus VM573]
 gi|258624704|ref|ZP_05719638.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|254846699|gb|EET25113.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258582991|gb|EEW07806.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|258587212|gb|EEW11923.1| peptide chain release factor 2 [Vibrio mimicus VM573]
          Length = 248

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/245 (62%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+K
Sbjct: 1   MFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +
Sbjct: 61  SATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|212213085|ref|YP_002304021.1| peptide chain release factor 2 [Coxiella burnetii CbuG_Q212]
 gi|212011495|gb|ACJ18876.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuG_Q212]
          Length = 289

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 160/280 (57%), Positives = 213/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E D  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKDTDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E+SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + VKDLRT +E ++   VLDGD+D F++A L
Sbjct: 241 IRSYVLDASR-VKDLRTGVETSNTQAVLDGDIDLFIEACL 279


>gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 382

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 160/331 (48%), Positives = 226/331 (68%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R+  L+ +   P  W +  +A+ + +E  +L + +     ++ ++ D   L E+A+EE 
Sbjct: 47  ERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSEVDTFTSLETKVDDLDTLWEMAMEEK 106

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +++ E    L+  K  +   +   LLS E D+N+A + +HAGAGGTE+QDW  MLLRM
Sbjct: 107 DDTLVSEMESELEGAKHTLSELELGMLLSDEYDANNAIMNLHAGAGGTEAQDWTGMLLRM 166

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           +TR+AE + F+ E L++  GEEAG KSATL IKG NAYG+LK E+GVHRLVRISP+DSN+
Sbjct: 167 FTRYAEGKGFEVELLDVLPGEEAGTKSATLAIKGHNAYGFLKSEKGVHRLVRISPFDSNA 226

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+++ V P +D+++E+ I+  D R+D YRASGAGGQHVN T SAVR+TH+PTG+V
Sbjct: 227 RRHTSFAAVDVMPEIDNTVEVNINMDDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIV 286

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK +   +LRAKL+E E   +++  +        I WG QIRSYV QPY
Sbjct: 287 VQCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAGDYQAIEWGSQIRSYVFQPY 346

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +VKD RT  E  +   V+DGDLD F+++ L
Sbjct: 347 TLVKDHRTGAETGNIQAVMDGDLDLFVESYL 377


>gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
 gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
          Length = 356

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 167/346 (48%), Positives = 224/346 (64%), Gaps = 2/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65
           L   GGLFD D   + ++    K  +P  W + + A+ ++     L D   +F+K ++D 
Sbjct: 2   LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVK-LRDN 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + +    +EL   E D  +  E   +    + E+E  +   LL GE D+ +A LE+H GA
Sbjct: 61  IGNLQTSIELLELEPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPGA 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW  MLLRMY RW E+  F  E      GEEAGIKS TLLIKG NA+G+L+ E+
Sbjct: 121 GGTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGYLRSEK 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+D+  RRHTSF+S+ V P +D+S+ I+I  SD R+DT+R+SGAGGQH+N 
Sbjct: 181 GVHRLVRISPFDAAGRRHTSFASVDVMPELDESVNIDIDPSDLRVDTFRSSGAGGQHINK 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + E
Sbjct: 241 TESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLE 300

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IGWG QIRSYV  PY +VKD R+  E  +   V+DGDLD F+ A L
Sbjct: 301 IGWGSQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYL 346


>gi|90417430|ref|ZP_01225354.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
 gi|90330764|gb|EAS46039.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
          Length = 310

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 161/307 (52%), Positives = 221/307 (71%), Gaps = 1/307 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + RER  L+  +  I+++   + D+  LL +A+EEDD   + +    +  ++ ++   +F
Sbjct: 1   MGRERSALEAVVKTIEDLDTGVADSRELLAMAVEEDDADTVADVETEIAALEAQLAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RWA+ + FK E +E   G+ AG
Sbjct: 61  RRMFSGEMDPNNAYLDIQSGSGGTEAQDWAEMLLRMYLRWADDKGFKAELVECSAGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK AT+ I G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+
Sbjct: 121 IKGATVQISGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVYVSPEIDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH P+G+VVQ Q +RSQH+N+ + W MLRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQSQSQRSQHQNRDKCWQMLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+  R++ A   E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD
Sbjct: 241 YELEVSIRQKAAQATEDTKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTGAVLDGKLD 299

Query: 345 DFMKATL 351
            F+ A+L
Sbjct: 300 QFIVASL 306


>gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281974|sp|Q04V47|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122283090|sp|Q04YD0|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 367

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 163/330 (49%), Positives = 223/330 (67%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  LN K+EDP LW N  EA+++ +++  L+  ++    IQ  + D   L+EL L+E  
Sbjct: 35  RLKALNEKSEDPDLWNNPEEARIVSQKKNELEKKLTPWFTIQQDILDFPDLVELTLDEKG 94

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            + + E S    R++ + E  +    L    D   A+L +H GAGGTESQDWA MLLRMY
Sbjct: 95  ENGIGELSMEYNRLQEKFEELELLGALKNSEDLKPAFLNIHPGAGGTESQDWAEMLLRMY 154

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+ EK+ ++   ++I  G+ AGIK+ TL + G  A+G+LKGE G+HRLVRISP+D+N R
Sbjct: 155 IRYFEKKGYQYSLIDIQAGDGAGIKNVTLHVVGDFAFGFLKGENGIHRLVRISPFDANKR 214

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQHVNTTDSAVRITH+P+G+VV
Sbjct: 215 RHTSFVSVHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVV 274

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+  A+ ML+A+LYE+E +K +E        K +I WG QIRSYV  PY 
Sbjct: 275 ACQNERSQIKNRDTAFKMLKARLYEMEQEKAKEELEKKSGEKKDIAWGSQIRSYVFHPYN 334

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +VKD RT+ E  + + V+DGD++ F+ A L
Sbjct: 335 LVKDHRTDHETGNVAAVMDGDIEPFILAYL 364


>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
 gi|167665826|gb|EDS09956.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
          Length = 374

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 158/338 (46%), Positives = 226/338 (66%), Gaps = 4/338 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +D   ++L+ L  +T  P  W +V  ++    E   +   +    ++     D L L+ L
Sbjct: 27  YDALRRKLAELEEQTTAPGFWNDVERSQKNQLETARVRGKLEACDKLNALYDDTLTLIGL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A EE+D S+  E   +++R + ++E ++  +LL+GE D+N+A +  HAGAGGTE+QDWA 
Sbjct: 87  ADEENDESVYSEALADVERFESDLETQKLSTLLTGEYDANNAIMTFHAGAGGTEAQDWAQ 146

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           ML RMYTRWAE+  F  + L+  DG+EAG+KSA++LI G NAYG+L+ E GVHRLVR+SP
Sbjct: 147 MLYRMYTRWAERHGFTYKILDYLDGDEAGLKSASILITGDNAYGFLRSEAGVHRLVRVSP 206

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D++ RRHTSF+S+ V P + D   +EI+  D ++D +R+SGAGGQH+N T SAVR+THI
Sbjct: 207 FDASGRRHTSFASVEVLPELPDDHSVEINPEDIKMDVFRSSGAGGQHINKTSSAVRLTHI 266

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIR 313
           PTG+VV CQ ERSQ +N+     ML AKL  +E+++RE +ANI E    + +I WG QIR
Sbjct: 267 PTGIVVSCQNERSQFQNREMCMKMLTAKL--VEIKEREHLANINEIKGEQMQIAWGSQIR 324

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV  PY + KD RT  E  + + V+DGDLD F+ A L
Sbjct: 325 SYVFMPYTLAKDHRTGFESGNINAVMDGDLDGFINAYL 362


>gi|167563347|ref|ZP_02356263.1| peptide chain release factor 2 [Burkholderia oklahomensis EO147]
 gi|167570518|ref|ZP_02363392.1| peptide chain release factor 2 [Burkholderia oklahomensis C6786]
          Length = 248

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 IGASL 244


>gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
 gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
          Length = 372

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 167/345 (48%), Positives = 230/345 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L    D DN  +++  L    ED   W +   ++  ++E + L +A +   E++   
Sbjct: 18  LKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDAFTNYNELEKLR 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D    +E+A EE+D SI+ +  + +   K   E  +  +LLS E D+ +A L+++AGAG
Sbjct: 78  DDARTFMEIADEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNCNAILKLNAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+MLLRMYTRWAE + +  E L+  DG+EAG+KS T+ I G NAYG+LK E+G
Sbjct: 138 GTESCDWASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQINGENAYGYLKSERG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+++N +R TSF S  V P +++ ++++I+E D RIDTYR+SGAGGQH+N T
Sbjct: 198 VHRLVRISPFNANGKRQTSFVSCDVMPDIEEDLDVDINEDDLRIDTYRSSGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SA+RITHIPTG+VVQCQ ERSQH+NK +A  ML+AKLY L+ Q+  E          EI
Sbjct: 258 SSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQENAEKEAGIRGEVKEI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSY+LQPY +VKD RTN E  +   VLDG++D F+   L
Sbjct: 318 GWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYL 362


>gi|167581337|ref|ZP_02374211.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis TXDOH]
 gi|167619419|ref|ZP_02388050.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis Bt4]
 gi|257138616|ref|ZP_05586878.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
          Length = 248

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGDYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|76810558|ref|YP_334108.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121600418|ref|YP_993518.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|124383704|ref|YP_001029053.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10229]
 gi|126449475|ref|YP_001081026.1| peptide chain release factor 2, programmed [Burkholderia mallei
           NCTC 10247]
 gi|134278044|ref|ZP_01764759.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|167720343|ref|ZP_02403579.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei DM98]
 gi|167739335|ref|ZP_02412109.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 14]
 gi|167816549|ref|ZP_02448229.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 91]
 gi|167824945|ref|ZP_02456416.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 9]
 gi|167846462|ref|ZP_02471970.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei B7210]
 gi|167895040|ref|ZP_02482442.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 7894]
 gi|167903426|ref|ZP_02490631.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911676|ref|ZP_02498767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 112]
 gi|167919676|ref|ZP_02506767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei BCC215]
 gi|254177740|ref|ZP_04884395.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|254195760|ref|ZP_04902186.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
 gi|254357976|ref|ZP_04974249.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|76580011|gb|ABA49486.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121229228|gb|ABM51746.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|134251694|gb|EBA51773.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|148027103|gb|EDK85124.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|160698779|gb|EDP88749.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|169652505|gb|EDS85198.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
          Length = 248

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|297520245|ref|ZP_06938631.1| peptide chain release factor 2 [Escherichia coli OP50]
          Length = 248

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 156/245 (63%), Positives = 188/245 (76%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIK
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F
Sbjct: 181 LEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
 gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
          Length = 352

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 169/344 (49%), Positives = 228/344 (66%), Gaps = 3/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q  + D 
Sbjct: 3   LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGTE
Sbjct: 63  DATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           LVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+S
Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307
           A+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++  E+A I    + EIG
Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 345


>gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 342

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 176/325 (54%), Positives = 226/325 (69%), Gaps = 4/325 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K   P  W +  +A+ ++ E   + +++     +Q+   +  ++ ELA EE D S+  E 
Sbjct: 12  KMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYDELEMMAELAEEEGDESLAAEV 71

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           +D+++++  ++E  + + LL+   D  +A LE+H GAGGTESQDW  MLLRMYTRWAEKR
Sbjct: 72  ADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLLRMYTRWAEKR 131

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S
Sbjct: 132 GFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVS 191

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P + D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERS
Sbjct: 192 CDVVPEISDDVEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQNERS 251

Query: 269 QHKNKAQAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           Q KN+ +A  MLR+KLYE  +E Q+RE     GE S  +I WG QIRSYV  PY MVKD 
Sbjct: 252 QIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQS--DIAWGSQIRSYVFHPYSMVKDH 309

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RTN+E  +   V+DGDLD F+   L
Sbjct: 310 RTNVETGNVGAVMDGDLDAFIDGYL 334


>gi|332534752|ref|ZP_08410580.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035839|gb|EGI72323.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 248

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 153/245 (62%), Positives = 190/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  DSNDAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E  DG+ AGIK
Sbjct: 1   MFSGPHDSNDAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+   G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ S
Sbjct: 61  GATVRFVGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQ++       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG+LD F
Sbjct: 181 LELQQQNAEKQTQEDAKSDIGWGSQIRSYVLDDAR-IKDLRTGVENRNTQSVLDGNLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 470

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 159/351 (45%), Positives = 226/351 (64%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S+ +  +     W   + RL  L+ +   P LW + I A  + RE   L   +  +   
Sbjct: 110 ISQSIQVIKRRLQWKKLLVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTF 169

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L+LA EE+D  +  ET   +  ++   + K+ E+LLS E D    Y+EV 
Sbjct: 170 ERELLEHIDMLKLAKEENDTELESETLKAMMDMRRVSKEKELEALLSAENDPCSCYIEVQ 229

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+M++ MY  WA++RKF    ++   GE AGIK AT+ + G  +YG+ K
Sbjct: 230 AGAGGTESNDWASMVMEMYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAK 289

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  ++I++SD RI+ +R+ GAGGQ
Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQ 349

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      
Sbjct: 350 HANTTDSAVRIIHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 409

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 410 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 460


>gi|134296298|ref|YP_001120033.1| peptide chain release factor 2 [Burkholderia vietnamiensis G4]
 gi|134139455|gb|ABO55198.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           vietnamiensis G4]
          Length = 248

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409924|gb|ABP66928.1| bacterial peptide chain release factor 2 (bRF-2)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 323

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 162/311 (52%), Positives = 222/311 (71%), Gaps = 2/311 (0%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           ++ ++++ + L + I   +++  +  D  +L +L +EE +  +  E   +L  ++ ++E 
Sbjct: 4   SQKVLQQIKRLKDKIERYQKLYSQWEDLKVLTQLCIEESNIEMSDELEKDLIDLERKIEE 63

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            + E LL+G  D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GE
Sbjct: 64  FKLEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGE 123

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           EAGIK+ T+ I G NAYG+LK E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +I
Sbjct: 124 EAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDI 183

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI E D  IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+
Sbjct: 184 EIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILK 243

Query: 282 AKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           AKL EL E ++RE+I  + +  +TEIGWG QIRSYV  PY +VKD RT+ E  +   V+D
Sbjct: 244 AKLLELREKERREKIQKL-KGEQTEIGWGNQIRSYVFCPYTLVKDHRTDAEVGNVEAVMD 302

Query: 341 GDLDDFMKATL 351
           G++D F+ A L
Sbjct: 303 GEIDVFINAYL 313


>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
 gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
          Length = 372

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 163/351 (46%), Positives = 230/351 (65%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  LN +  + D D   ++L  L  +   P LW +   A+ +  +  +L   ++ ++ 
Sbjct: 12  ELTGTLNSIQDVLDLDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVES 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D  +L ELA  EDD    +E    L  +K ++   +  +LLSGE D+ +A + +
Sbjct: 72  LGQRLEDLTVLYELAAAEDDEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++ AGG ++ DWA MLLRMY RWAE++ + TE  E    EEAGIKSAT  +K P AYG L
Sbjct: 132 NSQAGGVDAADWAQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I+E D R+D YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L++KL  LE +++EE A + E 
Sbjct: 252 GVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKATAMAVLQSKL--LERKRQEEAAALNEI 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +    WG QIR+YVL PYQ+VKDLRT  E  +PS VLDGDLD+F+++ +
Sbjct: 310 RGEATTSWGTQIRNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEI 360


>gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 374

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 180/344 (52%), Positives = 243/344 (70%), Gaps = 2/344 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G FD +   ++L+ +  +    + W +  +A+ +  ER  +++ ++    I+ +L D   
Sbjct: 24  GYFDIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESELNTFSSIEQQLEDIET 83

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLE+A EE + S+L E    L+ I+ E+   + +++LSGE D N+A + +HAGAGGTES 
Sbjct: 84  LLEIAEEESEESLLDEAESFLKNIERELNSLEVKTVLSGEFDKNNAIVTIHAGAGGTESC 143

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML+RMY RWAE++ F+TE L++ + EEAGIKSAT+LIKG  AYG L+ E G HRLV
Sbjct: 144 DWAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIKGAYAYGLLRAEHGTHRLV 203

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DSN+RRHTSF  + V P +D+ I+IEI + D RIDTYRASGAGGQHVN TDSAVR
Sbjct: 204 RISPFDSNARRHTSFCGVIVVPEIDEDIDIEIKDEDLRIDTYRASGAGGQHVNKTDSAVR 263

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV CQ ERSQ +N+ +A  +L+A+LYELE QKREE IA      KT I WG 
Sbjct: 264 ITHLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAEARGEHKT-IAWGN 322

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYV  PYQMVKD RT IE ++ + V+DG++D F++  L  K
Sbjct: 323 QIRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLKQK 366


>gi|154175392|ref|YP_001408592.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
 gi|112803979|gb|EAU01323.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
          Length = 372

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 168/354 (47%), Positives = 234/354 (66%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  +G +    +  +RL  +     +P  WQ++ +A  L +E+  + N ++    
Sbjct: 16  RLNTKVENIGSIIKPQSIKERLQEIERLEHEPDFWQDIAKAGALNKEKTKISNMLAKFTN 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D   L ELA  E D   L    D+   ++ ++   +   LLSGE D+ +A + +
Sbjct: 76  AKAAVDDAKELYELANSESDEETLNSLFDDATELENKITALEISMLLSGEDDNKNAIISI 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + ++KG NAYG+L
Sbjct: 136 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D +IDTYRASGAGGQ
Sbjct: 196 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEIDDDIEIEIEEKDLKIDTYRASGAGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PTG+VVQCQ +RSQHKN+A A  ML+++LYELEL K++E +N  E 
Sbjct: 256 HVNKTESAIRITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 315 -KSEIGWGHQIRSYVLFPYQQVKDNRSGQAFSQTDAILDGDIKKMIEGVLISQK 367


>gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
 gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
          Length = 338

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 157/321 (48%), Positives = 219/321 (68%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED   W + + ++  M+  + + + ++  +++  +  D   L+E+  EE+D S++ E  +
Sbjct: 2   EDGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYEENDASLIPEIEE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L       +  + ++LLSGE D ++A L +HAGAGGTES DWA ML RMY++WA+ R +
Sbjct: 62  MLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKWADSRGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +   L+  DG+EAGIKS T  I G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 ELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH
Sbjct: 182 VMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKLY L+ Q+  E A       TEIGWG QIRSYV+QPY MVKD RT +
Sbjct: 242 QNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTGV 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG +D F+   L
Sbjct: 302 ETGNVDSVMDGKIDLFINGYL 322


>gi|167586751|ref|ZP_02379139.1| peptide chain release factor 2 [Burkholderia ubonensis Bu]
          Length = 248

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATVKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
 gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
          Length = 330

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 165/322 (51%), Positives = 224/322 (69%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W +   A+ ++ +   L + ++   E+++ + D    +EL  EE D  + QE  +N
Sbjct: 4   EPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQEEFDEDMKQELENN 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K E+++ + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+  FK
Sbjct: 64  VVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQSGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P  D D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 184 IPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++E E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F++A L
Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324


>gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
 gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
          Length = 355

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 219/345 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GGLFD D   + ++    +   P  W +   A+  +     L         +QD++
Sbjct: 1   MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  E+   E D  +  E  DN   ++  +   + E LL G  D +DA LE+H GAG
Sbjct: 61  EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L  E+G
Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L
Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYL 345


>gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7]
 gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7]
          Length = 378

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 155/349 (44%), Positives = 233/349 (66%), Gaps = 11/349 (3%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  ++D +NA +++  L+ K  +P  W +  ++++++++ ++L+  +    +      D 
Sbjct: 23  LHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAADDI 82

Query: 70  LILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +++E+A EED+     +++E    L ++K +++    E+LL+GE D ++A L  HAGAG
Sbjct: 83  EVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHAGAG 142

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  ML+RMYT+WA+   F  + ++I +G +AGIKS ++ I+G NAYG+LK E G
Sbjct: 143 GTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMFIEGENAYGYLKSESG 202

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+DS+  RHTSFS++ V P +DD+IE+EI   D  ++ YRASGAGGQH+N T
Sbjct: 203 IHRLVRISPFDSSGSRHTSFSAVEVMPELDDTIEVEIRPEDIEMEVYRASGAGGQHINKT 262

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESS 302
            SAVR+ H PTG+V  CQ +RSQ +NK  A  ML+AKL E++    L+K E+I  +    
Sbjct: 263 SSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREHLEKIEDIKGV---- 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + EI WG QIRSYV  PY +VKDLRT  E  +   V+DGDLD F+ A L
Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYL 367


>gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862]
          Length = 332

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 165/326 (50%), Positives = 221/326 (67%), Gaps = 14/326 (4%)

Query: 33  PHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           P  W      Q VI+A  +++ R+  D+ ++    +++        LEL  E  D  +  
Sbjct: 4   PDFWNDNVAAQKVIDANNILKGRR--DDYLNLTAGVENVET----ALELLAEMPDEDMQA 57

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   +L+++  ++E  +   LL+   D N+A LE+H G+GGTES DW   L RMYTRWAE
Sbjct: 58  EMEADLEKLAADLESYRLAQLLNEPYDKNNAILEIHPGSGGTESADWGANLQRMYTRWAE 117

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +  FK E ++ H G+ AGI SATL+I G NAYG+L+ E+GVHR VRISP+DS  RRHTSF
Sbjct: 118 RHGFKVEIMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHTSF 177

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            SI V P +DDS++++I+ +D ++D YRASGAGGQH+N T SAVR+THIPTG+VV  QQ+
Sbjct: 178 VSIDVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQQQ 237

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           RSQ +NK  A+ MLRAKLY+LE+ K+E E A+I    + E GWG QIRSYV QPY+MVKD
Sbjct: 238 RSQFQNKDTAYAMLRAKLYQLEMDKKEKERASIA-GEQLENGWGSQIRSYVFQPYRMVKD 296

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN E  +P  V+DGDLD F+ A L
Sbjct: 297 HRTNYESGNPQGVMDGDLDPFINAYL 322


>gi|328472050|gb|EGF42927.1| peptide chain release factor 2 [Vibrio parahaemolyticus 10329]
          Length = 248

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 191/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I I+I+ +
Sbjct: 61  SATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124]
          Length = 362

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 162/351 (46%), Positives = 235/351 (66%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G   D  +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 12  ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL +EE+D    +E    ++ +  E++  + E++LSGE D NDA L +
Sbjct: 72  LNERIDDVEVLKEL-MEENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL E   +E+I ++  
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             K ++GWG QIRSYV  PY MVKD RTN+E ++ + V+DGD+D+F+ A L
Sbjct: 311 ELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|167837158|ref|ZP_02464041.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis MSMB43]
          Length = 248

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|225175296|ref|ZP_03729291.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
 gi|225169048|gb|EEG77847.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
          Length = 288

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 161/281 (57%), Positives = 208/281 (74%), Gaps = 3/281 (1%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           + LA +E D  +  +       +  E++  +   L  G  D+N+A + +H GAGGTESQD
Sbjct: 1   MTLAEDEGDKELWVDAEQVAAELAAEMDKLELAVLFRGRYDANNAIIAIHPGAGGTESQD 60

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WANMLLRMYTRWAE+R ++ E L++  G+EAGIKSATLLIKG NAYG+LK E+GVHRLVR
Sbjct: 61  WANMLLRMYTRWAERRNYQVEVLDLLPGDEAGIKSATLLIKGRNAYGFLKAERGVHRLVR 120

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           ISP+D+ SRRHTSF+S+ V P V++    IEIS  D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 121 ISPFDAASRRHTSFASLDVLPEVEEGDSGIEISPDDLKIDTYRASGAGGQHVNTTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           ITHIPTG VVQCQ ERSQH N+ +A  +L+A+L +L + Q+ EE++N+    + EI WG 
Sbjct: 181 ITHIPTGTVVQCQNERSQHSNRDRAMKILKARLADLYQRQQAEELSNL-RGEQKEIAWGS 239

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYV QPY MVKD RT +E  + + V+DGDLD+ +++ L
Sbjct: 240 QIRSYVFQPYTMVKDHRTGVEVGNINAVMDGDLDELIESYL 280


>gi|148981822|ref|ZP_01816539.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
 gi|145960730|gb|EDK26070.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
          Length = 248

 Score =  322 bits (824), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 192/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGEHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ S
Sbjct: 61  GATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDTKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|325662438|ref|ZP_08151044.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086228|ref|ZP_08335310.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471272|gb|EGC74496.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406387|gb|EGG85901.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 316

 Score =  322 bits (824), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 158/309 (51%), Positives = 221/309 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L +++   +E+  +  D  IL+++A EE+D S+++E    L++I+   E  + E
Sbjct: 1   MKELKSLQDSVKRTEELYRQYEDIQILIDMAYEENDESMIKEIETELKQIESTYEELRIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLS E D ++A + +HAGAGGTE+ DW NML RMY RW E + F TE L+  DG+  GI
Sbjct: 61  TLLSEEYDKDNAIVTLHAGAGGTEACDWVNMLYRMYNRWIESKGFTTEVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+L+ E+GVHRLVRISP++S ++R TSF+S  V P ++D I+IEI+E
Sbjct: 121 KTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSANKRQTSFASCDVVPDLEDDIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + +IDTYRASGAGGQHVN T SA+R+TH+PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DELKIDTYRASGAGGQHVNKTSSAIRLTHLPTGIVVQCQNERSQHSNKEKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY +VKD RTN E  + + VLDG+LD 
Sbjct: 241 LLKEQEQAEKVSGIRGEVKEIGFGNQIRSYVMQPYTLVKDHRTNEESGNVTSVLDGNLDP 300

Query: 346 FMKATLAIK 354
           F+ A L ++
Sbjct: 301 FINAYLKMR 309


>gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus
           GD/7]
          Length = 336

 Score =  322 bits (824), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 157/321 (48%), Positives = 220/321 (68%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W N  +A   M+E ++L + +     ++    D   LLE+  EE+D S++ E  +
Sbjct: 3   EEPGFWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYEENDASLIPEVQE 62

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +   +   E+ + ++LLS E D ++A + +HAGAGGTE+ DW +ML RMYTRWAEK  F
Sbjct: 63  AMADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRWAEKHGF 122

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            T  L+  DGEEAGIKS T+ I G NAYG++K E+G+HRLVRISP+++  +R TSF+S  
Sbjct: 123 TTTVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQTSFASCD 182

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PT +VVQCQ ERSQH
Sbjct: 183 VMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQNERSQH 242

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NK +A  ML+AKLY L+ Q+ +E  +       +  WG QIRSYV+QPY++VKD RT  
Sbjct: 243 MNKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAWGSQIRSYVMQPYKLVKDHRTGA 302

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E ++   V+DGD+D F+ A L
Sbjct: 303 ESSNVDAVMDGDIDLFINAYL 323


>gi|170702008|ref|ZP_02892928.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171322226|ref|ZP_02911072.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|172061072|ref|YP_001808724.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|170133098|gb|EDT01506.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171092451|gb|EDT37797.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|171993589|gb|ACB64508.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|325525095|gb|EGD02988.1| peptide chain release factor 2 [Burkholderia sp. TJI49]
          Length = 248

 Score =  322 bits (824), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL   + VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDF 239

Query: 347 MKATL 351
           + A+L
Sbjct: 240 ISASL 244


>gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
 gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
          Length = 355

 Score =  322 bits (824), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 168/345 (48%), Positives = 219/345 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GGLFD D   + ++    +   P  W +   A+  +     L         +QD++
Sbjct: 1   MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  E+   E D  +  E  DN   ++  +   + E LL G  D +DA LE+H GAG
Sbjct: 61  EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L  E+G
Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L
Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYL 345


>gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367]
 gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           brevis ATCC 367]
          Length = 343

 Score =  321 bits (823), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 158/319 (49%), Positives = 210/319 (65%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A++L+ E   +   +   + +  ++ D ++ LEL  EE D  +  E   + 
Sbjct: 15  PDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQEEPDAEMQAEFETDF 74

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
              +  +   +   LL+ + D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+  FK 
Sbjct: 75  ATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLLRMYTRWAEQHDFKV 134

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             L+   G+ AG+ S TL I G NAYG+L+ E+GVHRLVRISP+DS  RRHTSF+S+ V 
Sbjct: 135 TVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFASVDVL 194

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDS++I+I+ ++ ++D YRASGAGGQHVN T SAVRITHIPTG+V Q Q +RSQ +N
Sbjct: 195 PELDDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVTQSQAQRSQLQN 254

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A  MLRAKLYE   +K+ +     E  + EIGWG QIRSYV  PY MVKD RTN E 
Sbjct: 255 RQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFHPYTMVKDHRTNYET 314

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   V+DGDLD F+ A L
Sbjct: 315 GNGQAVMDGDLDPFIDAFL 333


>gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
 gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
          Length = 329

 Score =  321 bits (823), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 158/320 (49%), Positives = 220/320 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+   ++   L   +    ++   + D   L E+A EE+D S+L E  + 
Sbjct: 3   DPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAEENDESLLPEMDEL 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L + + E+E+ +   LLSGE D+N+A L +HAGAGGTE+QDW +MLLRM+TR+AE+  F 
Sbjct: 63  LAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRFAEQNGFA 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAG+KSAT+ + G NAYG+L+ E+GVHRLVRISP+D+N+RRHTSF+++ V
Sbjct: 123 LEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHTSFAAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD++++ I+  + R+D YR+SGAGGQHVN T SAVR+TH PTG+VVQCQ ERSQ +
Sbjct: 183 MPELDDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQNERSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +   MLRAKLYE E  K++ + +        I WG QIRSYV QPY MVKD RT  E
Sbjct: 243 NRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYTMVKDHRTGCE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGDL  F++A L
Sbjct: 303 TGNIQAVMDGDLMPFVEAYL 322


>gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
 gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
          Length = 359

 Score =  321 bits (823), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 168/354 (47%), Positives = 240/354 (67%), Gaps = 6/354 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L+ ++N +    D     + L  +  + ED  +W +    + L R++  ++  +  ++
Sbjct: 6   IQLADKINKIKEYLDPPKRKKELDDIQKQLEDSSVWNDYQLLQNLKRKQSSIEQKLKTVE 65

Query: 61  EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           E+++   D   LLEL+   EDD S  QE  DN++ +  +VE  + E+ LSGE D ++A +
Sbjct: 66  ELEN---DVDTLLELSEFVEDDESYKQELEDNIKELTKKVEKAETETFLSGEHDFSNAIV 122

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +H+GAGGTES DW +ML RMY+ W +  ++K E +++  G+EAG KS T L+ G  AYG
Sbjct: 123 TIHSGAGGTESCDWVSMLFRMYSMWCDNNEYKIEVMDLQPGDEAGYKSITFLVSGEKAYG 182

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E GVHRLVRISP+D+N RRHTSF+S+ V P ++D  EI+I   D +IDT+RASGAG
Sbjct: 183 YLKNENGVHRLVRISPFDANKRRHTSFASVSVLPEINDDTEIDIDPKDLKIDTFRASGAG 242

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSA+RITHIPTG+VV CQ ERSQHKNKA A  +L+AKLY+LE +K+++     
Sbjct: 243 GQHVNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKAKLYQLEEEKKKKELEKL 302

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK--TSPSDVLDGDLDDFMKATL 351
           E  K +I WG QIRSYVL PY+MVKD RT +EK   +   VL+G++DDF++  L
Sbjct: 303 EGEKKKIEWGSQIRSYVLHPYKMVKDHRTGVEKKDVAALAVLNGEIDDFIREAL 356


>gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 276

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 155/263 (58%), Positives = 203/263 (77%), Gaps = 1/263 (0%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           S +L + +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R
Sbjct: 2   SSDLDKYQTHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESR 61

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +KTE +E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S
Sbjct: 62  GWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTS 121

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RS
Sbjct: 122 VFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 181

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL   + +KDLRT
Sbjct: 182 QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRT 240

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
            IE++    VLDGDLD+F++A+L
Sbjct: 241 GIERSDTQKVLDGDLDEFVEASL 263


>gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
          Length = 391

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 164/342 (47%), Positives = 215/342 (62%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG FD+     RL  +  +   P  W        L+RE+  L + ++  + +     D 
Sbjct: 40  FGGGFDYAETKTRLEAIEHQLSKPGAWDKPGALTPLLREKTQLSDKLAMYESLAQAKDDL 99

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LELA E  D   +      +   K  +   +  ++ + E D  +A LE+H GAGG E
Sbjct: 100 DAWLELAHESRDEEAMAGLDGQISVFKERLGITELATMFAFEHDKGNAILEIHPGAGGVE 159

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWA MLLRMYTR+AE++ FK   L+   GEEAGIKS TL I+G  +YG LKGE GVHR
Sbjct: 160 SQDWAEMLLRMYTRFAERKGFKITQLDYQVGEEAGIKSVTLQIEGLYSYGLLKGESGVHR 219

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           L+RISP+DS+ RRHTSF+S+ VYP +DD IEIE+ + D RID +R+SG GGQ VN T SA
Sbjct: 220 LIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSA 279

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+V QCQ E+SQH+NKA A  +++A+LYE ELQK EE       +K  I WG
Sbjct: 280 VRITHLPTGIVAQCQNEKSQHRNKATALRLVKARLYERELQKIEESRRQDYQAKGAIAWG 339

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+Y LQPY++VKD R+N E  +    LDGDLD  ++  L
Sbjct: 340 SQIRTYTLQPYRLVKDHRSNSETGNVDAFLDGDLDAMIRNHL 381


>gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
 gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
          Length = 351

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 159/336 (47%), Positives = 233/336 (69%), Gaps = 2/336 (0%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+  +++  L+   E+P  W +  E+  ++RE + L + +    +++    D  +L+E+ 
Sbjct: 2   DSKEKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMG 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE+D S++ E    L+    E++  +  +LL+GE DS++A ++++AGAGGTES DW +M
Sbjct: 62  YEENDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMYTRWA K  +  + L+I +G+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+
Sbjct: 122 LYRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  +R TSF S  + P +++ ++++I+  D RIDTYR+SGAGGQH+N T SA+RITHIP
Sbjct: 182 NAAGKRQTSFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIP 241

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSY 315
           TGVVVQCQ ERSQ +NK +A  ML+AKL+ L+ Q   E++++I    K +IGWG QIRSY
Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVK-DIGWGNQIRSY 300

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V+QPY MVKD RT  E  + + V+DGD+D F+ A L
Sbjct: 301 VMQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYL 336


>gi|205375066|ref|ZP_03227857.1| hypothetical protein Bcoam_18782 [Bacillus coahuilensis m4-4]
          Length = 327

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 172/321 (53%), Positives = 220/321 (68%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ L+ E   L + +     + +   +  +  EL  EE D  +L E    
Sbjct: 3   DPDFWNDQQKAQGLINEANGLKDMVGQYHSMVEAHENLEVTFELVKEEGDEELLAELEPE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +  ++   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ FK
Sbjct: 63  LNDLTKQLNNYELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT  VV CQ ERSQ K
Sbjct: 183 MPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+  A  ML++KLY+L+++++E ++A I    + +IGWG QIRSYV  PY MVKD RTN 
Sbjct: 243 NREAAMKMLKSKLYQLKIEEQEAQLAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTNT 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + V+DGDLD F+ A L
Sbjct: 302 EVGNTNSVMDGDLDVFIDAYL 322


>gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1]
 gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum
           reducens MI-1]
          Length = 332

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 156/317 (49%), Positives = 213/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W ++  ++ + ++   L + ++    ++  L D  ++LEL  EE D  + +E S  L  
Sbjct: 6   FWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQEEQDPLLEEEFSSELST 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +E  + E +L+G  D  DA L +H GAGGTESQDWA MLLRMYTR+ E   +K E 
Sbjct: 66  LTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHNYKVEI 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L++  G+EAGIKSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+ V P+
Sbjct: 126 LDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHTSFASVDVLPL 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD +E+ I   D RIDTYRA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ  N+ 
Sbjct: 186 VDDEVEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTTNRQ 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  +L++KL +LELQK+E+        + +I WG QIRSYV  PY + KD RT  E  +
Sbjct: 246 AAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYSLAKDHRTGEETGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
            + V+DG++  F+ A L
Sbjct: 306 VNAVMDGNIGQFVTAYL 322


>gi|114561768|ref|YP_749281.1| peptide chain release factor 2 [Shewanella frigidimarina NCIMB 400]
 gi|114333061|gb|ABI70443.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           frigidimarina NCIMB 400]
          Length = 320

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 161/317 (50%), Positives = 221/317 (69%), Gaps = 1/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L   +  I ++   L D   LLELA+EEDD     + +  L+ 
Sbjct: 1   MWNEPERAQALGKERAALVVVVKTIDDMDTGLEDIQGLLELAIEEDDEETFNDAAAELEE 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +   +F  + SG++D+++ YL++ +G+GGTE+QDWANM+LRMY RW +   +  E 
Sbjct: 61  LDTRLADLEFRRMFSGKSDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYSPEL 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ DG+ AGIK AT+   G  A+GW++ E GVHRLVR SP+DS+ +RHTSF S++VYP 
Sbjct: 121 MEVTDGDVAGIKGATIKFTGEYAFGWMRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPE 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD IEI+I+ SD RIDTYRASGAGGQHVN TDSA+RITH+PT  VVQCQ +RSQHKN+ 
Sbjct: 181 IDDDIEIDINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNTVVQCQNDRSQHKNRD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A+  L+AKLYELE+ K+       E +K++IGWG QIRSYVL   + +KDLRT +E  +
Sbjct: 241 SAFKQLKAKLYELEMHKQNADKQAAEDAKSDIGWGSQIRSYVLDDAR-IKDLRTGVENRN 299

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++A+L
Sbjct: 300 TQTVLDGDLDKFIEASL 316


>gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 329

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 157/322 (48%), Positives = 221/322 (68%), Gaps = 2/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++   W N+  A+ +    + + + I      Q  + D  +L+E+A+EE+D S++ E  +
Sbjct: 2   QESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMAIEENDSSLVTEVYN 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +  +   VE  + E +LSGE D+N+A + +H+G GGT++ DW  MLLRMYTRW EK+ F
Sbjct: 62  EISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKAF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L++  G+EAGIKSATL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ 
Sbjct: 122 NVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLE 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +     +EI+ SD ++DTYRASGAGGQHVN T+SA+RITHIPTG+VVQCQ ERSQ 
Sbjct: 182 VTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQI 241

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           +N+  A NML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN
Sbjct: 242 QNRETALNMLKSKLVELKERAHKEKIEDLTGDLK-DMGWGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           I+      V+DG+LD F+K  L
Sbjct: 301 IQVNDVYKVMDGELDVFIKGYL 322


>gi|323497777|ref|ZP_08102791.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
 gi|323317124|gb|EGA70121.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
          Length = 248

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|323491501|ref|ZP_08096683.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
 gi|323314255|gb|EGA67337.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
          Length = 248

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ +
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|323697942|ref|ZP_08109854.1| peptide chain release factor 2 [Desulfovibrio sp. ND132]
 gi|323457874|gb|EGB13739.1| peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
          Length = 372

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 164/346 (47%), Positives = 219/346 (63%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           Q   L G  D+     RL  +  +   P  W N      L++E+  L   +     + + 
Sbjct: 17  QYESLWGRLDYAETKTRLDAIEKEISKPGAWDNPEALTPLLKEKSQLSTKLEMYDGLSEA 76

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D    LELA E+ D   L   +  +  ++  +   +  ++ + E D  DA LE+H GA
Sbjct: 77  KDDLDAWLELAQEDPDEESLSALNAQVALLRERLAGTELATMFAFEHDKGDAILEIHPGA 136

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ESQDWA MLLRMY R+AE++ FK   L+   GEEAG+KS TL I+G  AYG LKGE 
Sbjct: 137 GGVESQDWAEMLLRMYYRYAERKGFKVTQLDYQAGEEAGLKSVTLQIEGLFAYGLLKGET 196

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRL+RISP+DS+ RRHTSF+S+ VYP +D++IEIE+ + D RIDT+R+SG GGQ VN 
Sbjct: 197 GVHRLIRISPFDSSGRRHTSFASVDVYPDMDENIEIEVKDEDLRIDTFRSSGPGGQSVNK 256

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVRITHIPTG+V QCQ E+SQH+NKA A  +++A+LYE EL+K EE       +K  
Sbjct: 257 TSSAVRITHIPTGIVAQCQNEKSQHRNKATALRLVKARLYERELKKIEESRRQDYQAKDA 316

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           I WG QIR+Y LQPY++VKD R+N E  +    LDGDLD+ ++  L
Sbjct: 317 IAWGSQIRTYTLQPYRLVKDHRSNCESGNVDAFLDGDLDEMIRNYL 362


>gi|153952316|ref|YP_001398744.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223625|sp|A7H5G4|RF2_CAMJD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|152939762|gb|ABS44503.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 365

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 228/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +    N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPKNIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   LQ   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDIETLQALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN   S 
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--SSE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|153207868|ref|ZP_01946445.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165918820|ref|ZP_02218906.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212219147|ref|YP_002305934.1| peptide chain release factor 2 [Coxiella burnetii CbuK_Q154]
 gi|120576294|gb|EAX32918.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165917452|gb|EDR36056.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212013409|gb|ACJ20789.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuK_Q154]
          Length = 289

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 213/280 (76%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E +  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E+SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + VKDLRT +E ++   VLDGD+D F++A L
Sbjct: 241 IRSYVLDASR-VKDLRTGVETSNTQAVLDGDIDLFIEACL 279


>gi|307265609|ref|ZP_07547163.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919407|gb|EFN49627.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 330

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 161/323 (49%), Positives = 223/323 (69%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E    
Sbjct: 3   DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLEEGDESITDEVDKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + F+
Sbjct: 63  YKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ + V
Sbjct: 123 VETIDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ +
Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN E
Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
           + + + V+DG++D F+ A L  K
Sbjct: 303 EGNVNAVMDGEIDGFINAYLKQK 325


>gi|110834510|ref|YP_693369.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|110647621|emb|CAL17097.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 356

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 172/348 (49%), Positives = 230/348 (66%), Gaps = 8/348 (2%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    +RL+ +  + E P +W +   A+ L +ER  L+  +  I +    L D  
Sbjct: 6   GGIFDYVQKSERLTEVERELESPDVWNDPPYAQALGKERSQLEGVVKTIDDASQGLEDTS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL+L +EE D   L E   +L+ ++  V   +F  + SG+ D   AYL++ +G+GGTE+
Sbjct: 66  ALLDLVVEEGDEDTLSEVESDLRDLEKMVADLEFRRMFSGQMDPCSAYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA M+LRMY RW E   FKTE +E   G+ AGIKSAT+  +G  AYGWL+ E GVHRL
Sbjct: 126 QDWAEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATVRFEGDYAYGWLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS++V P VDD I+IEI   + R+DTYRASGAGGQHVN TDSAV
Sbjct: 186 VRKSPFDSGGRRHTSFSSVFVSPEVDDDIDIEIDLGNMRVDTYRASGAGGQHVNRTDSAV 245

Query: 251 RITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           R+T++          VV QCQ ERSQH+NK +A  M++AK+YELE+Q+R       E+SK
Sbjct: 246 RLTYLFKDDGGTEHTVVTQCQSERSQHQNKDKAMKMMQAKVYELEMQRRNAEKQALENSK 305

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 306 ADIGWGSQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGALDPFIEASL 352


>gi|157960584|ref|YP_001500618.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
 gi|157845584|gb|ABV86083.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
          Length = 293

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/280 (54%), Positives = 204/280 (72%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+EE+D     + +  LQ ++  +E  +F  + S   D++D YL++ +G+GGTE+Q
Sbjct: 11  LLELAVEENDEETFNDAAAELQGLEKRLEELEFRRMFSKPHDASDCYLDIQSGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANM+LRM+ RW E   +K E +E+  G+ AGIK AT+   G  A+G L+ E GVHRLV
Sbjct: 71  DWANMVLRMFLRWGEAHDYKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+R
Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E +K++IGWG Q
Sbjct: 191 ITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDAKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289


>gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
 gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
          Length = 369

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 167/339 (49%), Positives = 239/339 (70%), Gaps = 2/339 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +F  +N  + L  L  +  D   W +  +A+ + ++ Q +   I  +K+I+ +  D    
Sbjct: 23  VFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKDIEAKFEDLDAA 82

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL+  ++D S ++   + ++ I+ +V+  + E +L+G+ D+++AYL +H GAGGTESQD
Sbjct: 83  IELS--DEDQSFVETIKEMVEEIEKKVKTFELELILNGKFDASNAYLTIHPGAGGTESQD 140

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLRMY RWAE++ F  + ++   GEEAGIKSA + IKG  AYG+LK E+GVHRLVR
Sbjct: 141 WASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYLKYERGVHRLVR 200

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+N RRHTSF+S+ V P +DD I+IEI+  D RIDTYRASGAGGQ+VN T+SAVRI
Sbjct: 201 ISPFDANKRRHTSFASVNVIPEIDDDIDIEINPEDLRIDTYRASGAGGQYVNKTESAVRI 260

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VV CQ ERSQ +NK  A  +L+A+LY+LEL+KR++     +    +I WG QI
Sbjct: 261 THIPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEIQGELKDISWGNQI 320

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV QPY MVKD RTN+E  +   V+DG++D F+++ L
Sbjct: 321 RSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESEL 359


>gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
          Length = 330

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/323 (50%), Positives = 221/323 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E    
Sbjct: 3   DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVDKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + F+
Sbjct: 63  YKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ + V
Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ +
Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN E
Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DG++D F+ A L  K
Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325


>gi|148244437|ref|YP_001219131.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326264|dbj|BAF61407.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 364

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 168/330 (50%), Positives = 229/330 (69%), Gaps = 1/330 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  +  + EDP++W+N  +A+ L RE+  L +     +++   L D   LL LA  E+D
Sbjct: 32  RLEEILLEMEDPNIWENPNQAQSLGREKSKLISICQTFEQVNAILEDAQELLNLAQTEND 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                   ++L   +  +E  +F+ + SG+ D+N AYL++ +G+GGTE+QDWA M+LRMY
Sbjct: 92  TETANGIINDLDTAQSSIEKLEFKRMFSGDLDANSAYLDIQSGSGGTEAQDWAEMVLRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW EK  FK + +E+  GE AGIKSAT+  KG  A+GWL+ E G+HRLVR SP+++N +
Sbjct: 152 LRWGEKHNFKIKLMEVSAGEVAGIKSATIHFKGEYAFGWLRTEIGIHRLVRKSPFNANGK 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S++V P +D  I+I+IS SD RIDTYRASGAGGQHVN T+SAVRITH+PT  VV
Sbjct: 212 RHTSFCSVFVSPEIDSDIDIDISPSDLRIDTYRASGAGGQHVNKTESAVRITHLPTNTVV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ  RSQH NK QA   L++KLY+LE+QKR       E SK++I WG QIRSY+L   +
Sbjct: 272 QCQNGRSQHANKNQAIKQLQSKLYKLEMQKRNTEKQSLEQSKSDISWGHQIRSYILDQSR 331

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            VKDLRT IE ++  ++L+G+LD FMKA+L
Sbjct: 332 -VKDLRTGIESSNTQNILEGNLDQFMKASL 360


>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
 gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
          Length = 378

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 163/354 (46%), Positives = 229/354 (64%), Gaps = 9/354 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D     ++ L  ++ DP LW +   A+ + R   +L+N ++ +  
Sbjct: 12  ELGSTLTGIEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   L ELA E DD     E    L+ ++ +++  +  +L+SGE D  +A + +
Sbjct: 72  LRQRLEDVATLYELAEEMDDADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DWA  L RMY RWAE+  + TE  E    EEAGIKS T  +K P AYG L
Sbjct: 132 NAQAGGVDAADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+  RR TSF+ + V PVV+ S  +E+ E+D RID YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--- 298
            VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A  +L+AKL  LE +++EE A +   
Sbjct: 252 GVNTTDSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKL--LERKRQEEAAKMADL 309

Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            GE + +   WG QIR+YVL PYQ+VKDLRT +E  +P+ VLDG++D+F++A +
Sbjct: 310 RGEGTSS---WGTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEI 360


>gi|289523219|ref|ZP_06440073.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503762|gb|EFD24926.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 355

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++C G +FD D     +  L  KT  P  W N  +A+ + ++  HL + +   ++++   
Sbjct: 1   MSC-GKVFDVDTLESEIKALIDKTSSPDFW-NSSDAQKVTQKLSHLQDLLGQWQKMKAEW 58

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +L EL  E +D  ++ E  D   R++ E+   + E LL  E D ++A L VHAGAG
Sbjct: 59  EELEVLTELLNETEDEELIGEFYDKASRLRKEINSMEMELLLDEEYDESNAILTVHAGAG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++QDWA MLLRMY RWAE+  ++T+ ++I   EEAGIK AT+LIKG  +YG+LK E+G
Sbjct: 119 GLDAQDWAEMLLRMYLRWAERHNYETKVIDILPDEEAGIKYATILIKGICSYGYLKAEKG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+DS+ RRHTSF+SI V P + D  +IEI   + R++T+RASGAGGQ+VN T
Sbjct: 179 IHRLVRISPFDSSKRRHTSFASIEVIPELPDDADIEIRPEEIRMETFRASGAGGQYVNMT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+ HIPTG+VV CQ ERSQH N+  A  +L+AKLYE   Q+++++ +     K EI
Sbjct: 239 DSAVRLIHIPTGIVVTCQNERSQHMNRQVAMQLLKAKLYERRQQEKQKMLDDLHGEKKEI 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           GWG QIRSYVL PY MVKD RT     S   VLDGD+DDF+ A L ++K
Sbjct: 299 GWGSQIRSYVLHPYTMVKDHRTGYTSYSVDAVLDGDIDDFVIAYLRMRK 347


>gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
 gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
          Length = 299

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 156/293 (53%), Positives = 212/293 (72%), Gaps = 1/293 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++++   L DN+ L E++ EE D + L+       ++K  +E  +F  +  GEAD  + +
Sbjct: 4   LEKLTTELADNVELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNCF 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ ++G  AY
Sbjct: 64  IDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ SD R DTYRASGA
Sbjct: 124 GLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASGA 183

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E    
Sbjct: 184 GGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQK 243

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E +KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 244 LEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 295


>gi|255004320|ref|ZP_05279121.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Virginia]
          Length = 255

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 153/249 (61%), Positives = 188/249 (75%), Gaps = 1/249 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEALEIHDGEEAGI 165
           + SGEAD +  +L +  GAGGTES DWA MLLRMY RWA     F TE ++  DGE AG+
Sbjct: 1   MFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWAGTFHGFTTEIVDKIDGEAAGL 60

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I G  AYGW K E GVHRLVRISP+DS+SRRHTSF+S+ V P+ DD I+IEI E
Sbjct: 61  KSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHTSFASVEVSPIADDKIDIEILE 120

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ  RSQH+N+A+A+++LR++LY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQTSRSQHQNRAEAYSLLRSRLY 180

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQ++E+       S+ +IGWG QIRSYV+ PY+MVKDLRT  E      VLDGDLD 
Sbjct: 181 EMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVKDLRTGHETGDVDAVLDGDLDK 240

Query: 346 FMKATLAIK 354
           F+ A L  K
Sbjct: 241 FIAAALTYK 249


>gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii]
          Length = 371

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 166/345 (48%), Positives = 213/345 (61%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GGLFD+DN  + +     K  +P  W N  +A+ L+ E   L         ++  L
Sbjct: 17  LTTSGGLFDFDNISESIEINEAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D    LEL   E D  + ++T D L +++ E    +   LLSGE D ++A +E+H GAG
Sbjct: 77  TDEETALELLRLEADADLQKDTEDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW NMLLRMY R+ + R  K E      G+EAG+KS ++ I G NAYG LK E G
Sbjct: 137 GTEAMDWGNMLLRMYQRYCDSRGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS  RRHTSF+S+ V P VDDSIEI+I   D RID YR+SGAGGQH+N T
Sbjct: 197 VHRLVRISPFDSAKRRHTSFASVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHIPTG+V   Q +RSQ +N+  A N +RAKL+ LE +K+ +     +  + +I
Sbjct: 257 SSAVRITHIPTGIVTTSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV  PY MVKD RT  E      V+DG LD F+ A L
Sbjct: 317 AWGSQIRSYVFHPYSMVKDHRTGYETADVGGVMDGKLDPFIYAYL 361


>gi|167470509|ref|ZP_02335213.1| peptide chain release factor 2 [Yersinia pestis FV-1]
          Length = 248

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 154/245 (62%), Positives = 189/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D  + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|6093958|sp|O83585|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 368

 Score =  320 bits (819), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 161/341 (47%), Positives = 214/341 (62%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD      R++ L      P  W     A+ L+ E + L   +   + ++    D  
Sbjct: 16  GGVFDVAAYEARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALRRESADLR 75

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ELA E  D S+  E S     I    E      LL  E D  DA++ +H+GAGG E+
Sbjct: 76  ALYELAREAQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHSGAGGVEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML+RMYTRWAE+R F    +++ + E  G+KS TL I G +A+G+LKGE GVHRL
Sbjct: 136 CDWAQMLMRMYTRWAERRSFCVHIVDLLESE-GGVKSVTLKICGSHAFGFLKGETGVHRL 194

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS +RRHTSF+S +V+PV+DD +E+ I   D R+DTYR+ GAGGQHVN TDSAV
Sbjct: 195 VRISPFDSAARRHTSFTSTYVFPVLDDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSAV 254

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+VV CQ ERSQ  N+A A ++LRA+LY  E QK+++      S K +I WG 
Sbjct: 255 RITHLPTGIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEKKDISWGN 314

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYV  PY MVKD R+  E  +   V+DG L+ F+++ L
Sbjct: 315 QIRSYVFHPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYL 355


>gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
 gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
          Length = 330

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 162/323 (50%), Positives = 221/323 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E    
Sbjct: 3   DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVDKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + F+
Sbjct: 63  YKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ + V
Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ +
Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN E
Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DG++D F+ A L  K
Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325


>gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 330

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 162/323 (50%), Positives = 220/323 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W ++ +++ L + ++ L   +     +  +  D   L+EL LEE D SI  E    
Sbjct: 3   DPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELGLEEGDESITDEVDKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + F+
Sbjct: 63  YKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ + V
Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + + IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ +
Sbjct: 183 LPELKNDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN E
Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DG++D F+ A L  K
Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325


>gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
 gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
          Length = 364

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 172/355 (48%), Positives = 249/355 (70%), Gaps = 10/355 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++ + +  +F  ++  ++L  L ++T  P  W +  +A+ + RE Q +   +  +++
Sbjct: 7   ELKKKYDDIIEVFHPEDKKEKLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEK 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV--EYKQFES--LLSGEADSNDA 117
           I+    D  + +ELA  E+D S+     ++L++I  EV  + ++FE   +L+G+ D ++A
Sbjct: 67  IKVLFEDIEVGIELA--EEDPSM----QEHLEQIVDEVGEKIREFELALILNGKFDGSNA 120

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL +H GAGGTESQDWA+MLLRMY RWAE++ F  E ++  +GEEAGIKSATL IKG  A
Sbjct: 121 YLSIHPGAGGTESQDWASMLLRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFA 180

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+LK E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I+IEI   D R+DTYRASG
Sbjct: 181 YGYLKYERGVHRLVRISPFDANKRRHTSFASVNVLPEIEDDIDIEIRPEDLRVDTYRASG 240

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQ+VN T+SA+RITH+PTG+VV CQ ERSQ +N+  A  ML+A+LY+LEL+KR +   
Sbjct: 241 AGGQYVNKTESAIRITHLPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIE 300

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +    +I WG QIRSYV QPY MVKD RT++E  +   V+DG++D F++A L 
Sbjct: 301 QIQGELRDISWGNQIRSYVFQPYTMVKDHRTDVETGNIEAVMDGEIDMFIEAELV 355


>gi|154705875|ref|YP_001424983.1| peptide chain release factor 2 [Coxiella burnetii Dugway 5J108-111]
 gi|154355161|gb|ABS76623.1| bacterial peptide chain release factor 2 (RF-2) [Coxiella burnetii
           Dugway 5J108-111]
          Length = 289

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 159/280 (56%), Positives = 212/280 (75%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E +  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEVSKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + VKDLRT +E ++   VLDGD+D F++A L
Sbjct: 241 IRSYVLDASR-VKDLRTGVETSNTQAVLDGDIDLFIEACL 279


>gi|289423341|ref|ZP_06425149.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
 gi|289156272|gb|EFD04929.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
          Length = 350

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 164/339 (48%), Positives = 228/339 (67%), Gaps = 4/339 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD D+   R + +N   ED   W++   A  +++E + L + I     +  +L D  +L
Sbjct: 3   LFDLDSLKTRQADINASMEDQGFWEDSDHANRILQENKQLTSKIEDYDSLVGQLEDISVL 62

Query: 73  LELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +E+A E    E+D +I  +    +  +  ++     E L SGE DSN+A L +++G GG 
Sbjct: 63  IEMAEETSDSEEDKTIEDQLVAYISDVNEKIVNTTMELLFSGEYDSNNAILSINSGTGGL 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDWA MLLRMY RW+E R  K + L+I    EAGIK+A+L++ G NAYG+LK E+GVH
Sbjct: 123 DAQDWAQMLLRMYIRWSEGRGLKVKLLDIISDPEAGIKTASLMVSGVNAYGYLKSEKGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS+ +RHTSF+S+ V P ++D  +I I+ +D +IDTYR+SGAGGQHVNTTDS
Sbjct: 183 RLVRISPFDSSGKRHTSFASVDVLPEIEDDSDININPNDLKIDTYRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQ  NK  A  ML +KL +++ ++ +E     +   T+I W
Sbjct: 243 AVRITHLPTGIVVQCQNERSQRINKDVAMKMLISKLIQIKEEENKEKIEDLQGKYTQISW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           G QIRSYV QPY++VKD RTN E T+   V+DG LDDFM
Sbjct: 303 GSQIRSYVFQPYKLVKDHRTNKENTNVDAVMDGSLDDFM 341


>gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
 gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
          Length = 333

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 166/335 (49%), Positives = 232/335 (69%), Gaps = 10/335 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-----LEED 80
           +  K++ P  W +  +A  +M +       ++  K++++ + DN+ LL+L       EED
Sbjct: 1   MEKKSQSPDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEED 60

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + ++E+ + L ++  +++ K   + LSGE D N+ Y+ ++AGAGG E+ DWA+ML RM
Sbjct: 61  TVNAVEESLEALYKLADKMKLK---TQLSGEYDKNNCYISINAGAGGLEATDWADMLFRM 117

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+ +   +K E  ++++ E  GIKSATL +KGP AYG+LKGE+GVHRLVRISP+DS S
Sbjct: 118 YKRYFDNVGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQS 177

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V+P +DD++EI+I  SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV
Sbjct: 178 RRHTSFASVDVFPELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVV 237

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
              Q ERSQ +NK  A N+L +KL ++ E ++RE+I +I +   ++I WG QIRSYV QP
Sbjct: 238 ATSQAERSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDI-QGKYSQIAWGSQIRSYVFQP 296

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           Y MVKD RTN E  +   V+DGDL  F+ A LA K
Sbjct: 297 YTMVKDHRTNYEMGNVEAVMDGDLQGFIDAYLASK 331


>gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
 gi|166225118|sp|A6LN93|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
          Length = 369

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 153/271 (56%), Positives = 201/271 (74%)

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D + L      +  I+ +V+  + E +L+ + DS++AYL +H GAGGTESQDWA+MLLRM
Sbjct: 89  DATFLDTIKQLIDDIERKVKTFELELILNEKFDSSNAYLSIHPGAGGTESQDWASMLLRM 148

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+R F  + ++   GEEAGIKSA L IKG   YG+LK E+GVHRLVRISP+D+N 
Sbjct: 149 YMRWAERRGFDVQIVDYQPGEEAGIKSAMLYIKGEYVYGYLKYERGVHRLVRISPFDANK 208

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P ++D I++EI+  D RIDTYRASGAGGQ+VN T+SAVRITHIPTG+V
Sbjct: 209 RRHTSFASVNVMPEIEDDIDVEINPEDLRIDTYRASGAGGQYVNKTESAVRITHIPTGIV 268

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ ERSQ +NK  A  +L+A+LY+LEL+KR++     +    +I WG QIRSYV QPY
Sbjct: 269 VTCQTERSQLQNKETAMKVLKARLYQLELEKRQKQLEEIQGELKDISWGNQIRSYVFQPY 328

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN+E  +   V+DGD+D F+++ L
Sbjct: 329 TMVKDHRTNVETGNIDAVMDGDIDIFIESEL 359


>gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
 gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
          Length = 380

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376


>gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
 gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score =  319 bits (818), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 157/341 (46%), Positives = 228/341 (66%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D    R+S ++  +  P+ W +  +A+ L++E+  L+ ++    +    L D  
Sbjct: 27  GGIFDLDRKRSRISLIDRDSTLPNFWDDNTKAQALLKEKSTLEASVGAFDKALRGLDDAQ 86

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+ELA E +D +  QE    L  ++ ++   +   +LSGE D ++ +++++AGAGGT+S
Sbjct: 87  TLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGAGGTDS 146

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML+RMYTR+ E+R ++ E  ++  GEEAG K+ +L I+G  AYG+LK E GVHRL
Sbjct: 147 MDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEVGVHRL 206

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D  +   R  GAGGQ VN T S  
Sbjct: 207 VRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTA 266

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           ++ H+PT +++ CQ ERSQ  NK  A+ +LRA+LYELEL+KRE   +  E+ K +I +G 
Sbjct: 267 QLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKDISFGS 326

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL PY+MVKDLRT +E  +   VLDGDL+ F+ A L
Sbjct: 327 QIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 367


>gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
 gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
          Length = 363

 Score =  319 bits (818), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 168/349 (48%), Positives = 228/349 (65%), Gaps = 6/349 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEI 62
           L   GG+FD +   +R++           W +  +A+ L+ E + L N I    + I +I
Sbjct: 2   LTKFGGVFDSEAVKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADI 61

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L     L + A + D+   +QE   +L+ ++   E     +LLS E D +DA+L VH
Sbjct: 62  ED-LQTLYELTQEAGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDGSDAFLTVH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAE+R F  E L+  + +E G+KS TL I+G  AYG+LK
Sbjct: 121 AGAGGTEACDWAQMLTRMYLRWAERRGFSVETLDELEADE-GLKSITLQIRGDYAYGFLK 179

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRL+RISP+D+N+RRHTSFSS++V+PV+DD+IE+ I   D R+DTYRA GAGGQH
Sbjct: 180 AETGVHRLIRISPFDANARRHTSFSSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQH 239

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVR+TH+PTG+VV CQ ERSQ  N+A A +ML+A+LYE    ++E+      + 
Sbjct: 240 VNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAE 299

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  I WG QIRSY+ QPY MVKD RT  E  +   V+DGD+D F++  L
Sbjct: 300 KKGISWGNQIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFL 348


>gi|197335699|ref|YP_002155207.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
 gi|197317189|gb|ACH66636.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
          Length = 248

 Score =  319 bits (818), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 192/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S
Sbjct: 61  GATVRIAGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E +K++IGWG QIRSYVL   + +KDLRT IE  +   VLDGDLD F
Sbjct: 181 YELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 338

 Score =  319 bits (818), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 160/324 (49%), Positives = 220/324 (67%), Gaps = 6/324 (1%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W N  ++  ++RE ++L + +   +E++    D  +++++  EE+D S++ E  +
Sbjct: 2   EEPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYEENDASLIPEIEE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L      +E  + + LLSGE DSN+A L ++AGAGGTES DW +ML RMY RWAEK+ F
Sbjct: 62  MLGHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE L+  DG+EAGIKS T+ I G NAYG+L+ E GVHRLVRISP+++  +R TSF S  
Sbjct: 122 KTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P + + I+IEI+  D RIDTYR+SGAGGQH+N T SA+RITH P+G VV CQ ERSQ 
Sbjct: 182 IMPDIQEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLR 327
           +NK +A  ML++KL+   L K+EE A      + ++   GWG QIRSYVLQPY MVKD R
Sbjct: 242 QNKDKAMQMLKSKLF---LLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYTMVKDHR 298

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  E  +   VLDG++D F+ A L
Sbjct: 299 TGEESGNVDAVLDGNIDSFISAYL 322


>gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
 gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
          Length = 327

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 164/320 (51%), Positives = 216/320 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +  +A+ ++ E   L + ++   E+ +   +  +  +L  E+ D  +  E    L+ 
Sbjct: 6   FWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKEDYDEELHVELEKELKN 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK E 
Sbjct: 66  LTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 LDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVMPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITHIPT VVV CQ ERSQ KN+ 
Sbjct: 186 FNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN E  +
Sbjct: 246 RAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEMGN 305

Query: 335 PSDVLDGDLDDFMKATLAIK 354
              V+DGDLD F+ A L  K
Sbjct: 306 VQAVMDGDLDSFIDAYLRSK 325


>gi|227328400|ref|ZP_03832424.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 248

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 153/245 (62%), Positives = 188/245 (76%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG K
Sbjct: 1   MFSGQYDSADCYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
 gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
          Length = 368

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 162/332 (48%), Positives = 226/332 (68%), Gaps = 3/332 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           ++S L  + + P  W N   A+ +M+E  +    +     +Q +L D L L ++A+EE D
Sbjct: 31  KISILEIELQRPDFWDNPEGAQKVMQELSYQQEKVKTYYTLQQQLDDMLTLYQMAVEEKD 90

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            S+  E  + +  ++  ++  + E LLSG  D N+A + +HAGAGGTE+QDW +ML RMY
Sbjct: 91  ESLEPELEEGILALQQRLDGLELEILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMY 150

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+ E+  +K E ++   G+EAGIKSATL   G NA+G+LK E+GVHRLVRISP+D++ R
Sbjct: 151 IRYGERHGYKVETMDFLPGDEAGIKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGR 210

Query: 202 RHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RHTSF+S+ V P V++D+ EI+I   D ++DTYRASGAGGQHVN T SAVRITH+PTG+V
Sbjct: 211 RHTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIV 270

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQP 319
           VQ Q ERSQ +N+A    +L+AKL EL+ +++E EI+ I    + EI WG QIRSYV  P
Sbjct: 271 VQSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEI-RGEQQEIAWGSQIRSYVFHP 329

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y MVKD RTN E  +   V+DG++D F+ A L
Sbjct: 330 YNMVKDHRTNEETANTGAVMDGEIDQFIAAYL 361


>gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
 gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
          Length = 327

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 169/323 (52%), Positives = 214/323 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N   A+ ++ E   L   ++      +   +  + LEL  EEDD  + ++   +
Sbjct: 3   DPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDLHEDVDKD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +++   ++   +   LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK
Sbjct: 63  MKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAG+KS TL I+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P     IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH PTG VV CQQERSQ K
Sbjct: 183 MPEFTGEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY L++++ E         + EIGWG QIRSYV  PY MVKD RTN E
Sbjct: 243 NREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGD+D F+ + L  K
Sbjct: 303 TGNLGAVMDGDIDGFINSLLRSK 325


>gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
 gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
          Length = 365

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 162/318 (50%), Positives = 213/318 (66%), Gaps = 2/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +  +A+ ++     + + ++    ++  + +  +  EL LEE D  +  E    ++ 
Sbjct: 45  FWDDQRKAQEVINAANAIKDKVNTFYSLEGEVEELAVAFELILEEPDADLQAELESQIEE 104

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +   + E LLSG  D+N+A LE+H GAGGTESQDWA ML RMYTR+AE++ FK E 
Sbjct: 105 VSEHLNKFELEILLSGPYDANNAILELHPGAGGTESQDWAEMLYRMYTRYAERKGFKIEV 164

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+   GEEAGIKS T+ IKG NA+G+ K E+GVHRLVRISP+DS  RRHTSF S  V P 
Sbjct: 165 LDYLVGEEAGIKSVTIKIKGTNAFGYFKAERGVHRLVRISPFDSGGRRHTSFCSCDVMPE 224

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
               I+IEI   D +IDTYRASGAGGQH+NTTDSAVRITHIPT  +V CQ +RSQ KN+ 
Sbjct: 225 FSGDIDIEIRAEDLKIDTYRASGAGGQHINTTDSAVRITHIPTNTIVTCQNQRSQIKNRE 284

Query: 275 QAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KLY+ +L+++E E+A I    K EIGWG QIRSYV  PY +VKD RT+ E  
Sbjct: 285 AAMEMLKSKLYQRKLEEQEAELAKIRGEVK-EIGWGSQIRSYVFHPYSLVKDHRTSYEVG 343

Query: 334 SPSDVLDGDLDDFMKATL 351
           +   V+DGDLD F+ A L
Sbjct: 344 NVQSVMDGDLDGFIDAYL 361


>gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
 gi|149735912|gb|EDM51798.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
          Length = 286

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 156/277 (56%), Positives = 202/277 (72%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  EE+D SI++E     +    E E  + E+LLSGE D N+A ++++AGAGGTES DWA
Sbjct: 1   MGEEENDASIVEEVEQETKEFIDEFEKTKIETLLSGEYDKNNAIVKINAGAGGTESCDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML RMYTRWAE + +KTE L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRIS
Sbjct: 61  SMLYRMYTRWAESKGYKTEVLDFLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S  V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SAVRITH
Sbjct: 121 PFNAAGKRQTSFASCDVMPDIEEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+ EE  +       EIGWG QIRS
Sbjct: 181 NPTGIVVQCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIRGEIKEIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YV+QPY MVKD RTN E T    V+DG +D F+ A L
Sbjct: 241 YVMQPYTMVKDHRTNQEITDVGKVMDGYIDPFINAYL 277


>gi|327395061|dbj|BAK12483.1| peptide chain release factor 2 PrfB [Pantoea ananatis AJ13355]
          Length = 293

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 160/280 (57%), Positives = 207/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LL+LA+E DD     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE+Q
Sbjct: 11  LLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHRLV
Sbjct: 71  DWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K++IGWG Q
Sbjct: 191 ITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWGSQ 250

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 289


>gi|310659612|ref|YP_003937333.1| prfb [Clostridium sticklandii DSM 519]
 gi|308826390|emb|CBH22428.1| PrfB [Clostridium sticklandii]
          Length = 328

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 159/322 (49%), Positives = 226/322 (70%), Gaps = 6/322 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W  V +A+  M++ + +++ +     ++  L D  +L ELA  ++D S+ +E    
Sbjct: 3   EPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELA--DEDASLEKELHSA 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  ++ +++  +  +LLSG+ D N+A + +HAG+GG ++QDW  MLLRMY R+A+   F+
Sbjct: 61  LNSLEEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSMGFR 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              L++    EAGIKS TL I+G NAYG+LK E+GVHR+VRISP+D++ +RHTSF+S+ V
Sbjct: 121 VIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFASVDV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DDSIEI+I+ +D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ +RSQH 
Sbjct: 181 IPELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQRSQHS 240

Query: 272 NKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           NK  A  ML AKL EL EL+ +++I ++ GE S  +I WG QIRSYV QPY MVKD RTN
Sbjct: 241 NKETAMKMLMAKLIELKELEHKDKIEDLQGEYS--QISWGSQIRSYVFQPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DG++  F+ A L
Sbjct: 299 TEIGHVQSVMDGNIMPFINAYL 320


>gi|302391071|ref|YP_003826891.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
 gi|302203148|gb|ADL11826.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
          Length = 366

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 165/338 (48%), Positives = 232/338 (68%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   ++   L  +   P  W +   A+ + +E   L + +     +++RL +  +L+
Sbjct: 23  LDYDKLEEKHDQLRAEMSKPGFWDDSSRAQQISKEASALKDMMESFDRLEERLEEIEVLI 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EEDD S+ +E  D LQ ++ ++E  + + ++ GE D N A L ++ GAGG +SQDW
Sbjct: 83  ELGQEEDDDSVTEEIKDKLQGLEEDIEELELKVVMDGEYDQNSALLSINPGAGGIDSQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAEK+ ++ E LE   GEEAGIKS TL I GP AYG+LK E+GVHR+VR+
Sbjct: 143 AEMLLRMYNRWAEKKDYQIETLEFMAGEEAGIKSVTLQINGPYAYGYLKAEKGVHRMVRV 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+ RRHTSF+S+ V P ++D I+I+I ++D +I+TYRASGAGGQHVNTTDSAVRIT
Sbjct: 203 SPFDSSGRRHTSFASVEVLPEIEDDIDIDIEKNDLKIETYRASGAGGQHVNTTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ  RSQHKN+ +A  +L+AKL++   +K+ E  +     K +I WG QIR
Sbjct: 263 HQPTGIVVQCQSLRSQHKNRQKAMQILKAKLFDYMKEKQAEKLSEIRGEKKDISWGSQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SY   PYQ++KD RTN+E  +   V+DG+LD  ++A L
Sbjct: 323 SYFFDPYQLIKDHRTNLEINNIEAVMDGELDPLIEAYL 360


>gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
 gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
          Length = 348

 Score =  319 bits (817), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 165/342 (48%), Positives = 219/342 (64%), Gaps = 1/342 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD +   ++   L  ++ DP  W +  +AK +  +   L++++     ++    D   + 
Sbjct: 8   FDPEGLRRQADELRLRSSDPAFW-STGDAKEVSSQLSRLESSLEHWDHLERMFSDLETMA 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   +DD  +  E          EVE++Q + LLS   DS DA + +HAG+GG +SQDW
Sbjct: 67  ELLEIDDDPELAAEFDAKSGEYSREVEHRQMDLLLSEAYDSRDAIVTIHAGSGGLDSQDW 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY RW E+  +KT  L++   EEAG+KS T  + G  AYG+LK E GVHRLVRI
Sbjct: 127 AEMLYRMYLRWCEENGYKTRLLDLQQDEEAGLKSVTFTVSGSCAYGYLKSETGVHRLVRI 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+N RRHTSFS + V P + D +E+ I + D RIDTYR+SGAGGQHVN TDSAVRIT
Sbjct: 187 SPFDTNKRRHTSFSGVVVSPQLPDDVEVAIRDEDLRIDTYRSSGAGGQHVNMTDSAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VV CQ ERSQH NKA A  +LR+KLY+L++Q R +  +     K E  WG QIR
Sbjct: 247 HLPTGIVVSCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKESSWGHQIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SYVLQPY +VKD RT  E  + + VLDGDLD F+ A L  +K
Sbjct: 307 SYVLQPYTLVKDHRTGEETGNVAAVLDGDLDRFILAYLRWRK 348


>gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA]
          Length = 343

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 160/341 (46%), Positives = 229/341 (67%), Gaps = 3/341 (0%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  Q++  L  + E P  W +   ++  M+E + + + +   + +  ++ D   ++E+  
Sbjct: 3   NKEQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGY 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE+D +++ E  + L   + + +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML
Sbjct: 63  EENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+RWA+K+ F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP++
Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  +R TSF S  V P +   +++EI++ + RIDTYR+SGAGGQH+N T SA+RITH PT
Sbjct: 183 AAGKRQTSFVSCDVMPDIKKDLDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQH NK +A  ML+AKLY L+ Q+ EE  +      T+IGWG QIRSYV+
Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVM 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL---AIKK 355
           QPY MVKD RTN E  +   VLDG +D F+ A L   A+KK
Sbjct: 303 QPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKWIALKK 343


>gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8]
 gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8]
          Length = 378

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 154/349 (44%), Positives = 233/349 (66%), Gaps = 11/349 (3%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  ++D +NA +++  L+ K  +P  W +  ++++++++ ++L+  +    +      D 
Sbjct: 23  LHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAADDI 82

Query: 70  LILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +++E+A EED+     +++E    L ++K +++    E+LL+GE D ++A L  HAGAG
Sbjct: 83  EVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHAGAG 142

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  ML+RMYT+WA+   F  + ++I +G +AGIKS ++ I+G NAYG+LK E G
Sbjct: 143 GTEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMFIEGENAYGYLKSESG 202

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+DS+  RHTSFS++ V P +DD+IE+EI   D  ++ YRASGAGGQH+N T
Sbjct: 203 IHRLVRISPFDSSGSRHTSFSAVEVMPELDDNIEVEIRPEDIEMEVYRASGAGGQHINKT 262

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESS 302
            SAVR+ H PTG+V  CQ +RSQ +N+  A  ML+AKL E++    L+K E+I  +    
Sbjct: 263 SSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREHLEKIEDIKGV---- 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + EI WG QIRSYV  PY +VKDLRT  E  +   V+DGDLD F+ A L
Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYL 367


>gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
 gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
          Length = 329

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 198/277 (71%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE D  +  E    + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +ML
Sbjct: 49  EEADPEMEAELEARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSML 108

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMYTR+ E+  ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D
Sbjct: 109 LRMYTRFCEQHGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFD 168

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  RRHTSF S+ V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIPT
Sbjct: 169 SAKRRHTSFCSVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPT 228

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV 
Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVF 288

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PY MVKD RTN E  +   V+DGDLD F+ A L +K
Sbjct: 289 HPYSMVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
 gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
          Length = 329

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 198/277 (71%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE D  +  E    + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +ML
Sbjct: 49  EEADPEMEAELEARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSML 108

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMYTR+ E+  ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D
Sbjct: 109 LRMYTRFCEQHGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFD 168

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  RRHTSF S+ V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIPT
Sbjct: 169 SAKRRHTSFCSVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPT 228

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV 
Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVF 288

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PY MVKD RTN E  +   V+DGDLD F+ A L +K
Sbjct: 289 HPYSMVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
          Length = 340

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 158/326 (48%), Positives = 221/326 (67%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K   P  W++  +AK + ++   L + +  +K++     +    L L  E+ +  +L
Sbjct: 5   LEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDEDFNAELL 64

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L RI+  +E  + E  L+ + D NDA L +H+GAGGTESQDWA MLLRMY  WA
Sbjct: 65  AEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRMYAHWA 124

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK  +  + ++   GEEAG+KS ++ IKG  AYG LK E GVHRLVRISP+++  +R TS
Sbjct: 125 EKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQGKRQTS 184

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++VYP  D+ +EIEI+  D +IDT+RASGAGGQ+VNTTDSAVRITH+PT + V CQ 
Sbjct: 185 FASVFVYPEFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITVTCQN 244

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+ +A ++L+++LY+   ++RE+     E+SKTEIGWG QIRSYV  PYQM+KD
Sbjct: 245 ERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQMIKD 304

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN E  +   V++GDL+DF+ A L
Sbjct: 305 HRTNYETGNVDKVMNGDLNDFIYAWL 330


>gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
 gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
          Length = 299

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 156/293 (53%), Positives = 211/293 (72%), Gaps = 1/293 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++++   L DN  L E++ EE D + L+       ++K  +E  +F  +  GEAD  + +
Sbjct: 4   LEKLTTELADNSELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNCF 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ ++G  AY
Sbjct: 64  IDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ SD R DTYRASGA
Sbjct: 124 GLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASGA 183

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E    
Sbjct: 184 GGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQK 243

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E +KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 244 LEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 295


>gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555]
 gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016]
 gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555]
 gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 328

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 156/322 (48%), Positives = 221/322 (68%), Gaps = 2/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++  A+ +  E ++L+  ++    +   + D  ILLE+  EE+D    QE   
Sbjct: 2   QEPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKEEEDSMSFQEVMK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           +++ I+ +VE  + E LL GE D N+A L +H G GGT++QDW  MLLRMY RWAEK  +
Sbjct: 62  DIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEKMGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K   +++ + E+AGIKS +L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ 
Sbjct: 122 KVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFASVE 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +    +IEI   D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH
Sbjct: 182 VLPELTGDQDIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK QA  +L+AKL EL E   ++ I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 242 YNKEQALKILKAKLVELKERAHKDRIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ S V+DGD+D+F+K  L
Sbjct: 301 VESSNVSSVMDGDIDNFIKGYL 322


>gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 337

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 223/322 (69%), Gaps = 2/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W +  E+  ++RE + L + +    +++    D  +L+E+  EE+D S++ E   
Sbjct: 2   EEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEENDESLIPEIEA 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+    E++  +  +LL+GE D   A ++++AGAGGTES DW +ML RMYTRWA K  +
Sbjct: 62  MLEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + L+I DG+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TVDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P +++ ++++I+  D RIDTYR+SGAGGQH+N T SA+RITHIPTGVVVQCQ ERSQ 
Sbjct: 182 IMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           +NK +A  ML+AKL+ L+ Q   E++++I    K +IGWG QIRSYV+QPY MVKD RT 
Sbjct: 242 QNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVK-DIGWGNQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  + S V+DGD+D F+ A L
Sbjct: 301 AESGNVSAVMDGDIDKFIIAYL 322


>gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 330

 Score =  318 bits (816), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 161/323 (49%), Positives = 221/323 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W ++ +++ L ++++ L   +     +  +  D   L+EL L+E D SI  E    
Sbjct: 3   DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLDEGDESITDEVDKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + F+
Sbjct: 63  YKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ + V
Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ +
Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN E
Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DG++D F+ A L  K
Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325


>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
 gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
           fusca YX]
          Length = 375

 Score =  318 bits (816), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 163/352 (46%), Positives = 229/352 (65%), Gaps = 5/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  L  +  + D D     +  L  ++ DP LW +   A+ + R    L++ +S ++ 
Sbjct: 12  ELTSTLENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVEN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ R+ D  +L ELA  E+D   L E    L  ++ ++   +  +LLSG  D  +A + +
Sbjct: 72  IRSRIDDLGVLFELAAAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DW  ML RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L
Sbjct: 132 NAQAGGVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGML 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+ SRR TSF+ + V PVV+ S  IEI ES+ RID YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQSRRQTSFAGVDVVPVVEQSDHIEIDESELRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-G 299
            VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A ++L+AKL E + Q+ E E+A + G
Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRG 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ES++    WG Q+R+YVL PYQ VKD+RT +E  + S VLDG++D+F+ A +
Sbjct: 312 ESAR---AWGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGI 360


>gi|269123112|ref|YP_003305689.1| peptide chain release factor 2 [Streptobacillus moniliformis DSM
           12112]
 gi|268314438|gb|ACZ00812.1| bacterial peptide chain release factor 2 (bRF- 2) [Streptobacillus
           moniliformis DSM 12112]
          Length = 362

 Score =  318 bits (816), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 172/327 (52%), Positives = 230/327 (70%), Gaps = 14/327 (4%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSILQE 87
           +D +  QNV++   L++ER         IK+I   L  N    ILLE   +E+  S+ + 
Sbjct: 47  KDQNKSQNVLKEISLLKER---------IKDISKLLTLNENIQILLEFYKQEE-ISLEEL 96

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            ++ L+ IK E++  + + LL+G+ D N A L ++AGAGGTES DW +ML RMY RWA +
Sbjct: 97  ETETLEFIK-ELDKFKIKLLLNGKYDKNSAILTINAGAGGTESCDWVSMLYRMYDRWAMQ 155

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            KFK E L+I  G+EAGIKS TL IKG  AYG+L  E+GVHRLVRISP+DSN+RRHTSF+
Sbjct: 156 NKFKVEVLDILAGDEAGIKSITLSIKGDYAYGYLDCEKGVHRLVRISPFDSNARRHTSFA 215

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P ++D +E+ + + D +IDTYRASGAGGQHVNTTDSAVRITHIPTG+VV CQ ER
Sbjct: 216 AVNVIPEIEDDVEVNLKKEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVICQNER 275

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ+KN   A  +LRAKL+E+EL+ RE   N  +  +++I WG QIRSYV QPY+MVKD R
Sbjct: 276 SQNKNLNSAMKVLRAKLFEIELKNRENEINDLKGVQSKIEWGSQIRSYVFQPYKMVKDHR 335

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E+ +   V+DGD++ F+   L I+
Sbjct: 336 TNHEENNVDKVMDGDINIFIDEYLKIR 362


>gi|303327864|ref|ZP_07358304.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
 gi|302862225|gb|EFL85159.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
          Length = 366

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 218/340 (64%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD  ++ QRL  + T+   P  W        +++E++ L++ +  +  ++   
Sbjct: 14  LTTFGGVFDVASSEQRLRDIETELSRPGAWDKPEALTPVLQEKRRLEDEVGRLTRLKTCR 73

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D    L LA E +D   L+      + +   ++  +   LLS E D  DA LE+H GAG
Sbjct: 74  DDMEEWLVLASENEDQEALESLEQQQKELAALLDETELVMLLSAEEDGQDAILEIHPGAG 133

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA MLLR+YTRWA +RK+  E ++   G+EAGIKS TL I GP+A+G+LK E+G
Sbjct: 134 GTESQDWAEMLLRLYTRWAARRKYAVEEMDFLPGDEAGIKSVTLRISGPHAFGFLKSERG 193

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRL+RISP+D++ RRHTSF+S+ V P   + I+++I ESD R D +R+SG GGQ VNTT
Sbjct: 194 IHRLIRISPFDASGRRHTSFASVDVIPDAGNDIQLDIKESDLRFDIFRSSGPGGQSVNTT 253

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+  QCQ E+SQH NK  A  +LRA+LY LELQKRE       + K  I
Sbjct: 254 SSAVRVTHLPTGISAQCQNEKSQHHNKETALRVLRARLYNLELQKREAERQAEYAGKDAI 313

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            +G QIR+Y LQPY++VKD RT  E      VLDG +D F
Sbjct: 314 AFGSQIRTYTLQPYRLVKDHRTGSESGDVDAVLDGQIDQF 353


>gi|281185482|sp|Q0TNE1|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium
           perfringens ATCC 13124]
          Length = 362

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 158/327 (48%), Positives = 225/327 (68%), Gaps = 3/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    
Sbjct: 36  LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETA 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E    ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW 
Sbjct: 95  KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWC 154

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK+ +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TS
Sbjct: 155 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 214

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ 
Sbjct: 215 FASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQN 274

Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ  N+  A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVK
Sbjct: 275 ERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVK 333

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D RTN+E ++ + V+DGD+D+F+ A L
Sbjct: 334 DHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|282891215|ref|ZP_06299718.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498908|gb|EFB41224.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 341

 Score =  318 bits (815), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 157/330 (47%), Positives = 219/330 (66%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           ++  L T+ E P  W +   A+ ++ E   L        ++++R  +   LL+ A +  +
Sbjct: 7   KVKALETEMEAPTFWDDNDAAQKVIAECNALKAWTIPYHDLKERYSNVSELLQEAFDLGE 66

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            S++QE  + L  I+  ++  +   +L+GE DS +A+L ++AGAGGTE+ DW  ML RMY
Sbjct: 67  ESLIQELVEELDSIEASLKELEIRKMLAGELDSKNAFLSINAGAGGTEACDWVLMLSRMY 126

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWA K+ +K E ++  DG+ AGIKS T    GP AYG+ K E+GVHRLVRISP+DSN++
Sbjct: 127 QRWAAKKNWKVEVIDTVDGDVAGIKSITYKFTGPFAYGYAKAEKGVHRLVRISPFDSNAK 186

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ + P + D I+IEI   D R+DT+RASGAGGQHVN TDSAVR+TH+PTG+VV
Sbjct: 187 RHTSFASVDITPEITDDIQIEIRPEDLRVDTFRASGAGGQHVNRTDSAVRLTHLPTGIVV 246

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ +RSQ +NK   + MLR+KLYE+E+  RE         K EI WG QIR+YV QPY 
Sbjct: 247 SCQAQRSQLQNKETCYKMLRSKLYEMEVTARENALKAMGGEKKEIAWGSQIRNYVFQPYT 306

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +VKD RT +E  +   V+DG+LDDF+ A L
Sbjct: 307 LVKDTRTKVECGNIQAVMDGELDDFVNAYL 336


>gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88]
 gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88]
          Length = 325

 Score =  318 bits (815), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 228/322 (70%), Gaps = 2/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P  W+++  A+ + ++ + + + +     +++R+ D+L+L+EL  EE+D S   E   
Sbjct: 2   QEPDFWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAGEVLK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L  +K E+E  + E LLSGE D N+A + +HAG GGT++QDW  MLLRMYTRWAEK+ +
Sbjct: 62  ELVLLKKEIESFRIEVLLSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEKKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K + L+   G+EAGIKS TL I G  AYG+LK E+GVHR+VRISPY++N +R TSF+S+ 
Sbjct: 122 KVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFASLE 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P + +  +IEI + D ++DTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH
Sbjct: 182 LIPELTEDQDIEIIDDDLKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSERSQH 241

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            N+  A  ML+AKL EL E + +E+I ++    K ++GWG QIRSYV  PY +VKD RT+
Sbjct: 242 SNRDTALKMLKAKLVELKEAEHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  + + V+DGD+D F+   L
Sbjct: 301 AETGNLTAVMDGDIDLFINEYL 322


>gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258186|gb|EDS72152.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
          Length = 364

 Score =  318 bits (815), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 170/341 (49%), Positives = 231/341 (67%), Gaps = 12/341 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V++ + +N    D   W    +A  +++E + L + I+    ++ +  D  +L+E+ 
Sbjct: 32  DELVKKETLMN----DESFWNENDKANKILKEVKSLKSQINSYSSLEYKKDDISVLVEM- 86

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+ED     Q  +D+     LE+E +      ++LLSGE DSN+A L +H GAGGTESQD
Sbjct: 87  LQED---FSQNEADSAMEELLELEKELKVFTIDTLLSGEYDSNNAILSIHPGAGGTESQD 143

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRM+ R+AEKRKFK + LE   G+ AGIKS TLLI G NAYG+LKGE+GVHRLVR
Sbjct: 144 WAEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKSVTLLISGDNAYGYLKGEKGVHRLVR 203

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DSNSRRHTSF+S+ V P + + I +EI+ SD +IDTYRA GAGGQHVN TDSAVRI
Sbjct: 204 ISPFDSNSRRHTSFASVDVEPEIKEDINLEINPSDLKIDTYRAGGAGGQHVNKTDSAVRI 263

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PT +VV CQ ERSQ +NK  A  +L+ KLY++ +++ +E  +  +    +I WG QI
Sbjct: 264 THLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEIKGDYGQIAWGNQI 323

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYV  PY MVKD RT  E ++   V+DGD++ F+ A L +
Sbjct: 324 RSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLKM 364


>gi|282158488|gb|ADA77879.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 248

 Score =  318 bits (815), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 190/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK
Sbjct: 1   MFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPT 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +E T+   VLDGDLD F
Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 369

 Score =  318 bits (815), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 170/358 (47%), Positives = 239/358 (66%), Gaps = 9/358 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFI- 59
           +L + L  +G   D DN    +  +  +T   + W +  +A+ +M +     D+  +FI 
Sbjct: 13  ELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72

Query: 60  --KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
             +E++D+  D + ++E   EE D   L +  ++L  +K E+   + ++ L GE D N+A
Sbjct: 73  LKEELKDQ-SDLIDIIEETNEELDS--LVDVENSLNMLKKEISSFKIKTELDGEYDRNNA 129

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           Y+ +HAGAGG E+ DWA ML+RMYTR+ E+R FK +  ++++ E  GIKSAT+ IKG  A
Sbjct: 130 YMVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFA 189

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI   D RIDTYRASG
Sbjct: 190 YGYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASG 249

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIA 296
           AGGQHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL ++ E + RE+I 
Sbjct: 250 AGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIE 309

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I + + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+ A LA K
Sbjct: 310 DI-QGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 366


>gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
 gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
          Length = 312

 Score =  318 bits (815), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 161/309 (52%), Positives = 216/309 (69%), Gaps = 6/309 (1%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYK 102
           M+ER  L + I  I+ +     +   L+E+A+E +D  +   L+     LQ++  E+E K
Sbjct: 1   MKERMLLLDKIEPIENLIKNANNIYELVEMAIESNDTEMEKELETECIELQKVFNELETK 60

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
              +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+E
Sbjct: 61  ---NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDE 117

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK  +  ++G  AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+E
Sbjct: 118 AGIKQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVE 177

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+++D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+A
Sbjct: 178 INQADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKA 237

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KLY+LE +K ++        KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG+
Sbjct: 238 KLYQLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGN 297

Query: 343 LDDFMKATL 351
           +D+F+ A L
Sbjct: 298 IDEFISAYL 306


>gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
 gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
          Length = 327

 Score =  318 bits (814), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 165/318 (51%), Positives = 231/318 (72%), Gaps = 2/318 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++ + W ++ +A+ + +E + L + I      ++RL D  IL+E+++EEDD S ++E  +
Sbjct: 2   QESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEILN 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            ++ I++ ++  + + LLSGE D N+A + +HAGAGGT++QDW  MLLRMYTRW+E + +
Sbjct: 62  EVKEIQIIIDEFRVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSETKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ 
Sbjct: 122 KVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLE 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P + +S +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ 
Sbjct: 182 ILPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQF 241

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           +NK  A +ML++KL EL E   +E+I ++    K EIGWG QIRSYV QPY MVKD RTN
Sbjct: 242 QNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFM 347
            E  +   V+DGD+D F+
Sbjct: 301 TEMGNVEAVMDGDIDIFI 318


>gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium
           praevalens DSM 2228]
          Length = 365

 Score =  318 bits (814), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 164/321 (51%), Positives = 224/321 (69%), Gaps = 3/321 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+   ++   +   I  I+ ++++  +  I LELA EED  ++ +E  + L  
Sbjct: 44  FWDDKENARQKSQQLDRIKKRIKVIQSLEEKFEEAEIYLELAAEED-ANLNKELQNTLAE 102

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ E+E  + +  L+   D ++A L +H GAGGTESQDWA MLLRMY+RWAE   ++ E 
Sbjct: 103 LEKEIEKLELKLRLNEPYDDHNAILSIHPGAGGTESQDWAQMLLRMYSRWAEANDYQLET 162

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+ + GEEAGIKS TL+I G  AYG+LKGE+GVHRLVRISP+D++ RRHTSF+S+ V P 
Sbjct: 163 LDFNPGEEAGIKSVTLMISGDYAYGYLKGERGVHRLVRISPFDASGRRHTSFASVDVMPE 222

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D  +E+EI E++ +IDTYRASGAGGQHVN TDSAVRITH PTGVVVQCQ +RSQHKNK 
Sbjct: 223 IDSDLEVEIDENNLKIDTYRASGAGGQHVNKTDSAVRITHQPTGVVVQCQNQRSQHKNKE 282

Query: 275 QAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  +L +KL EL+ + + E+I  +G   K EI WG QIRSYV  PY M+KD RT+ E+ 
Sbjct: 283 TAMKILSSKLLELKREAQAEKIDELGGEHK-EIAWGSQIRSYVFHPYSMIKDHRTDFEEG 341

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG LD+F+++ L  K
Sbjct: 342 NVDKVMDGYLDEFIESYLKYK 362


>gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 325

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 222/322 (68%), Gaps = 3/322 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ + +E + + + I  ++ +Q +L D  +L E+ +++DD     E  +N++ 
Sbjct: 6   FWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEM-MDDDDEESAYEIINNIKE 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+ E++    E LLSGE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ +K E 
Sbjct: 65  IEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKNYKVEV 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASMEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +I+I   D ++DTYRASGAGGQH+N TDSAVRITHIPTGVVVQCQ ERSQ  NK 
Sbjct: 185 LTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQNERSQFSNKD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML+AKL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RTN+E +
Sbjct: 245 TAMGMLKAKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTNVEVS 303

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
           + + V+DGDLD F+ + L   K
Sbjct: 304 NVTAVMDGDLDLFINSYLKSSK 325


>gi|206890892|ref|YP_002247867.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742830|gb|ACI21887.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 287

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 149/276 (53%), Positives = 206/276 (74%), Gaps = 4/276 (1%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EED   +L++  + ++ IK ++E+ + + LL GE D N+A + +H GAGGTESQDWA +L
Sbjct: 7   EEDGYLLLKDLEEEVENIKSQIEHLEIKLLLKGEHDKNNAIVSIHPGAGGTESQDWAEIL 66

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY RWAEK+ FK E +++  GEEAGIK  T  ++G  AYG+LK E GVHRLVR+SP+D
Sbjct: 67  MRMYLRWAEKKGFKVEIVDLQLGEEAGIKDVTFTVEGQYAYGYLKCESGVHRLVRVSPFD 126

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N RRHTSF+++ V P ++D+I++EI + D R+DT+RASGAGGQHVN   SAVRI HIPT
Sbjct: 127 ANKRRHTSFAAVSVLPEIEDNIQVEIKDEDIRVDTFRASGAGGQHVNKVSSAVRIVHIPT 186

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--IANIGESSKTEIGWGRQIRSY 315
           G++V CQ ERSQH+N+  A  +LR+K+Y L LQK +E  I +I   +K EI WG QIRSY
Sbjct: 187 GIIVTCQTERSQHRNREIAMKILRSKIYAL-LQKEQEDKIKSI-TGNKKEIAWGSQIRSY 244

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +L PY+++KD RT+IE  +  DVLDG++D F++  L
Sbjct: 245 ILHPYRLIKDHRTDIEVYNVEDVLDGNIDIFIETYL 280


>gi|319891756|ref|YP_004148631.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
           ED99]
          Length = 329

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 166/326 (50%), Positives = 224/326 (68%), Gaps = 11/326 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N   A+ ++ +   + + ++   E+ + L + +   EL  EE D     E  D+
Sbjct: 4   DPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQEEYD----DEMKDD 59

Query: 92  LQR--IKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           L++  I  + +  QFE   LL GE D+N+A LE+H GAGGTESQDW NMLLRMY R+ E+
Sbjct: 60  LEQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQ 119

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + FK E ++   G+EAG+KS T+L+KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+
Sbjct: 120 QGFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFA 179

Query: 208 SIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           S  V P  ++  IE+EI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q E
Sbjct: 180 SCDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNE 239

Query: 267 RSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           RSQ KN+  A  ML+AKLY+LEL QK +E+A I    + +IGWG QIRSYV  PY MVKD
Sbjct: 240 RSQIKNREAAMKMLKAKLYQLELEQKEQELAAI-RGEQKDIGWGSQIRSYVFHPYSMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN E  + + V+DG++  F++A L
Sbjct: 299 HRTNEETGNVNAVMDGEIGPFIEAYL 324


>gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
 gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
          Length = 331

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 160/321 (49%), Positives = 218/321 (67%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +A+M++++   L        +++ ++ +  +L E+  E+ +  I  E  + 
Sbjct: 3   EPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKEDPEEEIHDELVER 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++ E+E  +   LLSG  D   A LE+H GAGGTESQDW +MLLRMYTRWAE+  ++
Sbjct: 63  VHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQHGYR 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++  DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+D+  +RHTSF SI +
Sbjct: 123 IETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFCSIDI 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P ++  I+IEI+  D +ID YRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ K
Sbjct: 183 MPQLEGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQFK 242

Query: 272 NKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK QA  ML+ KLY+LE +K+  E+A I    + +I WG QIR+YV  PY +VKDLR+  
Sbjct: 243 NKDQAMAMLKTKLYQLEEEKKAAELAEI-RGEQKDIAWGSQIRNYVFHPYSLVKDLRSGH 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGDLD FM A L
Sbjct: 302 ETGNIGAVMDGDLDPFMDAYL 322


>gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101]
 gi|123145940|sp|Q0SR12|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 160/351 (45%), Positives = 234/351 (66%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G   D  +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 14  ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL +EE+D    +E    ++ +  E++  + E++LSGE D N+A L +
Sbjct: 74  LNERIDDVEVLKEL-MEENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL E   +E+I ++  
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             K ++GWG QIRSYV  PY MVKD RTN+E ++ + V+ GD+D+F+ A L
Sbjct: 313 ELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
 gi|189039998|sp|A9NF23|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
          Length = 365

 Score =  317 bits (813), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 172/346 (49%), Positives = 224/346 (64%), Gaps = 4/346 (1%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L    D D    RL  +     +P+ W +  +AK + +E   L      I  IQ++  D 
Sbjct: 20  LENALDLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTITSIQNQYEDA 79

Query: 70  LILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L+ LE A E  +   IL+   D+LQ+   E E    E LL+GE D N+A LE+H GAGGT
Sbjct: 80  LMWLEEAKEGTESWDILEAEIDSLQKKISEFE---IEVLLNGEYDHNNAILELHPGAGGT 136

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES DW  +L+RMY R+A  + +K E L    GEEAG+KS TL I GP AYG LK E+GVH
Sbjct: 137 ESMDWCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYGNLKSERGVH 196

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DSN RRHTSF S  V P +D++ E+E+ + D R+DT+++SGAGGQ VNTT S
Sbjct: 197 RLVRISPFDSNKRRHTSFVSCDVAPEIDETSEVELKDDDIRMDTFQSSGAGGQSVNTTYS 256

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VV  Q ERSQ KNK  A  +L++KL + EL++++   N  +  K++IGW
Sbjct: 257 AVRLTHIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNALKGEKSDIGW 316

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV QPYQMVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 317 GSQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKSK 362


>gi|167011047|ref|ZP_02275978.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC200]
          Length = 248

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 148/245 (60%), Positives = 189/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK
Sbjct: 1   MFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT +E T+   VLDGDLD F
Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|224373403|ref|YP_002607775.1| peptide chain release factor 2 [Nautilia profundicola AmH]
 gi|254790918|sp|B9L5Y7|RF2_NAUPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|223589806|gb|ACM93542.1| peptide chain release factor 2 [Nautilia profundicola AmH]
          Length = 367

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 168/334 (50%), Positives = 223/334 (66%), Gaps = 2/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  +      P  W +   +  + +E+  +   +   K+ +  L DN  + ELA  E+D
Sbjct: 32  RLKEIEELENSPDFWNDPKTSAKVQKEKNAILRKLEKYKKAKTALQDNKDMFELASMEED 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L E  +++Q +K  +   + E +LS E D+ +A + +H GAGGTES DWA++L RMY
Sbjct: 92  EETLNEVFNDVQDLKKIIRDLEIEVMLSDENDAKNAIISIHPGAGGTESHDWASILYRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+AE+R +K E L+   G+EAGIK  + L+KG NAYG+LK E G+HRLVR+SP+DS  R
Sbjct: 152 LRYAERRGWKVEVLDYQAGDEAGIKDVSFLVKGENAYGYLKAENGIHRLVRVSPFDSGGR 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ V P +DD IEIEI   D RID +RASGAGGQHVN T+SAVRITHIPTG+VV
Sbjct: 212 RHTSFASVQVSPEIDDDIEIEIDPKDIRIDVFRASGAGGQHVNKTESAVRITHIPTGIVV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ +RSQHKNK  A  ML++KLYELEL+KR+  A      K E+GWG QIRSYVL PYQ
Sbjct: 272 GCQTDRSQHKNKDMAMKMLKSKLYELELEKRK--AEEEGKPKDEMGWGHQIRSYVLFPYQ 329

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            VKD R+N   +   D+LDGDLD+ ++  L  +K
Sbjct: 330 QVKDNRSNKAYSRVDDILDGDLDEVIEDVLIAEK 363


>gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
 gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
          Length = 396

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 159/349 (45%), Positives = 222/349 (63%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++   G   D D     ++    K  +P  WQ+ + A+ ++ E   L        ++
Sbjct: 38  MSAEIEKFGDSLDLDALNDEIAANEAKMVEPDFWQDNVAAQKIIDENNVLKGRRDDYLKL 97

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + +    ++L  E  D  +  E +D+L ++  ++   +   LL+   D N+A LE+H
Sbjct: 98  ANGVENVEAAIDLLSELYDEDMATEMADDLDKLSEDLSAYRLAQLLNEPYDKNNAILEIH 157

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G+GGTES DW   L RMYTRWAE+  FK + ++ H G+ AG+ S TL+I G NAYG+L+
Sbjct: 158 PGSGGTESADWGANLQRMYTRWAEQHGFKVDIMDYHPGDVAGVDSVTLMITGHNAYGYLR 217

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHR VRISP+DS  RRHTSF SI V P +DDS+E++I+ +D ++D YRASGAGGQH
Sbjct: 218 SERGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDSVEVDINPADVKMDVYRASGAGGQH 277

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+THIPTG+VV  QQ+RSQ +NK  A+ MLRAKLY+LE+ K+E+        
Sbjct: 278 INKTSSAVRLTHIPTGIVVASQQQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERAAIAGD 337

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             E GWG QIRSYV QPY+MVKD R   E  +P  V+DGDLD F+ A L
Sbjct: 338 HLENGWGSQIRSYVFQPYRMVKDHRDGFESGNPQAVMDGDLDPFINAYL 386


>gi|322379487|ref|ZP_08053853.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
 gi|322380468|ref|ZP_08054667.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321147113|gb|EFX41814.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321148094|gb|EFX42628.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
          Length = 382

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 148/274 (54%), Positives = 196/274 (71%), Gaps = 2/274 (0%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D   L +  +   ++   V+  +   +L+ + DS DA + +  G GGTESQDWA+ML 
Sbjct: 99  QEDTQALTQLFEEAPKLAARVQSMEVSVMLANDQDSMDAIVSIQPGVGGTESQDWASMLY 158

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWAE++ FK E L+  +GEEAGIK    +I+G N YG++K E G+HRLVR+SP+++
Sbjct: 159 RMYLRWAERKGFKVELLDYQEGEEAGIKGVAFVIRGVNVYGYMKNENGIHRLVRMSPFNA 218

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +RHTSF+S+ V P VDD I I I E D R+DTYRASGAGGQHVN T+SA+RITH  TG
Sbjct: 219 NGKRHTSFASVQVSPEVDDDINIVIEEKDIRVDTYRASGAGGQHVNKTESAIRITHFATG 278

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ +RSQHKNKA A  ML++KLYELEL K+ E +N+ E  K++IGWG QIRSYVL 
Sbjct: 279 IVVQCQNDRSQHKNKAMALKMLKSKLYELELCKQREQSNMEE--KSDIGWGHQIRSYVLA 336

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           PYQ +KD R+ I  ++   +LDGDLD  M+  L 
Sbjct: 337 PYQQIKDARSEIAYSNVGAILDGDLDTLMEDVLV 370


>gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
 gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
          Length = 371

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 170/354 (48%), Positives = 228/354 (64%), Gaps = 18/354 (5%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           LN L    D +   + +  L  +T D H W N  +AK +        N ++ +K+  D  
Sbjct: 17  LNELFVSIDIEGLKREIEGLTVQTLDEHFWNNQEQAKKIY-------NQLNEMKKTTDTY 69

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDA 117
            D  ++  L   ++    ++ET D   +  L+ +Y+ FE          L SGE D ++A
Sbjct: 70  DD--LVSSLNDLDETYDYVKETEDTDFKEALDQDYELFEKHLNDFEKTLLFSGEYDHHNA 127

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +E+H GAGGTESQDWA ML+RMY R+ +K+ FK E L+  DGEEAG+KS TL   G NA
Sbjct: 128 IVEIHPGAGGTESQDWAAMLMRMYQRYGDKKDFKVEVLDYLDGEEAGLKSVTLRFIGYNA 187

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P  D+ IEIEI ++D RIDTYRASG
Sbjct: 188 YGHLKAEKGVHRLVRISPFDSSKRRHTSFASVDVMPEFDNDIEIEIDQNDLRIDTYRASG 247

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQH+N TDSA+RITHIPT +VV CQ +RSQ +N+ QA  ML++KLY++ L+++    +
Sbjct: 248 AGGQHINKTDSAIRITHIPTHIVVTCQSQRSQIQNREQALIMLKSKLYQVMLEEQASKLS 307

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +  +  I WG QIRSYVL PY MVKD R+  E  +P  +LDGDLDD + A L
Sbjct: 308 DIKGEQKAIEWGSQIRSYVLHPYSMVKDNRSGYESNNPKAILDGDLDDCIYAYL 361


>gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
 gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
          Length = 371

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 161/351 (45%), Positives = 223/351 (63%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +   L    D      RL  +  +   P  WQN  E   ++RE+  L   I   +
Sbjct: 12  LELQEKFESLWRRLDLQGHHDRLKTIEEELAKPEAWQNPEELTPILREKSRLTEEIESWE 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++D   D    LE+A E+    +LQ  S+    +  ++   + E LLS   D  +A LE
Sbjct: 72  ALRDLHEDLQEWLEMADEDQGQEVLQALSETNANLAAQLNKVEMELLLSKPEDKGNAILE 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTE+QDWA MLLRMY RW E+R FK + L+   GEEAGIKS TL I+G  AYG 
Sbjct: 132 IHPGAGGTEAQDWAEMLLRMYLRWCERRGFKVQELDSLPGEEAGIKSVTLQIQGTFAYGL 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E+G+HRL+RISP+D++ RRHTSF+S+ VYP   D IEI++++ D R+D +R+SG GG
Sbjct: 192 LQAEKGIHRLIRISPFDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN T SA+RITH P+G+VVQCQ E+SQ +NK  A  +L+++LY+ E +KRE       
Sbjct: 252 QNVNKTSSAIRITHFPSGIVVQCQNEKSQRRNKETAMKILKSRLYDQERKKREADKQAEY 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +SK  I WG QIR+Y LQPY++VKD RTN E      VLDGD+D F+++ L
Sbjct: 312 ASKEAIAWGSQIRTYTLQPYRLVKDHRTNTEAGDVDKVLDGDIDVFLRSYL 362


>gi|310778152|ref|YP_003966485.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
 gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
          Length = 365

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 160/340 (47%), Positives = 226/340 (66%), Gaps = 1/340 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G  D +    ++  L  +T     W +  E++ L++E   L   I   + I+ +L D + 
Sbjct: 22  GSLDLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNALKEIIGEYRSIE-KLSDEVS 80

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +L   +E  +   L+E     + +   +     + LL GE D+N+A + +H+GAGGTE+ 
Sbjct: 81  VLLEFVEMGEDEFLEELETKHRGLDKVIGAFDVKLLLDGEFDANNAIVTIHSGAGGTEAC 140

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY+RW   R +K   L+   GE  GIKS T+L++G  AYG+LK E+G+HRLV
Sbjct: 141 DWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKSITILVEGMRAYGYLKNEKGIHRLV 200

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D+N +RHTSF+S+ V P VD++ +IEI+  D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 201 RISPFDANKKRHTSFASVDVMPEVDETTDIEINTGDLKIDTYRASGAGGQHVNTTDSAVR 260

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+GVVV CQ+ERSQ +N+  A  +LR+KL ELE++KREE     +  +++IGWG Q
Sbjct: 261 ITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLELEMKKREEELKKIQGEQSDIGWGSQ 320

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYV QPY +VKD RT +E  +   V+DGD+DDF+   L
Sbjct: 321 IRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDFINGHL 360


>gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 369

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 159/346 (45%), Positives = 223/346 (64%), Gaps = 2/346 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L+ +G   D     + +  L  ++ DP  W +   A+ +MR    L N +    E+  +
Sbjct: 16  RLDRIGVRLDLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRNQVETWTELHQQ 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D   L++LA  +DD  +  E +   +R+   VE  +   LLSG+ D +DA + +HAG 
Sbjct: 76  AADLRELIDLAEADDD--LRDEIAAETERVLRGVEQLELNLLLSGQYDEHDAIMAIHAGT 133

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ++QDWA ML+RMY RWA  R F+ + L++ +GEEAGIKSAT+ I+GP AYG+ KGE 
Sbjct: 134 GGVDAQDWAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEIRGPYAYGYTKGEA 193

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVR+SP+D   RRHT+F+ + V P V++  EI I + + RIDTYR+SGAGGQHVN 
Sbjct: 194 GTHRLVRLSPFDQAHRRHTAFALVEVLPQVEEDTEIVIRDDEIRIDTYRSSGAGGQHVNK 253

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L EL ++KREE     +     
Sbjct: 254 TDSAVRITHLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRKREEEQAKLKGEHVA 313

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +GWG +IRSYVLQPY MV D RT    ++   V +G++D F++A L
Sbjct: 314 VGWGNRIRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYL 359


>gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
 gi|158448884|gb|EDP25879.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
          Length = 370

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 172/340 (50%), Positives = 232/340 (68%), Gaps = 4/340 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D +N   R++ LN + E P  W +V  ++ + RE ++L + +   K++++   D   L+
Sbjct: 25  LDIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQDLVDNYKKLENDYLDIDTLI 84

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            +A EE+D S++ E  + +   K E E  +   L + E D  +A L +H+G GGTES DW
Sbjct: 85  LMAEEENDSSLIPEIGEQIDIFKKEFEEYRINLLFTDEFDDCNAVLTLHSGEGGTESCDW 144

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML RMYTRWAEK     E L+  +G+EAGIKS T+ I GP+AYG+LK E+GVHRLVRI
Sbjct: 145 ASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQINGPHAYGYLKSEKGVHRLVRI 204

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP++S  +R TSF+S  V P ++  +EIEI + D RIDTYR+SGAGGQH+N T SA+RIT
Sbjct: 205 SPFNSAGKRMTSFASCDVIPDIEQDLEIEIRDEDIRIDTYRSSGAGGQHINKTSSAIRIT 264

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQ 311
           H PTG+VVQCQ ERSQ  NK +A  ML++KLY L+ Q+  E I++I GE   T+ G+G Q
Sbjct: 265 HFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENLERISDIRGEV--TDNGFGSQ 322

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVLQPY MVKD RT+ E ++ S VLDGDLD FM A L
Sbjct: 323 IRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYL 362


>gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977]
 gi|238688912|sp|B1MEU8|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus]
          Length = 367

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 162/351 (46%), Positives = 226/351 (64%), Gaps = 5/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP+LW +    + +  +  H    +  ++E+
Sbjct: 12  LDTTLTTVERVLDVDGLRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA E +D S++ E      +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RSRLDDLPVLYELAEESEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE  K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDLRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+A+L  LE +++EE A + ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARL--LERKRQEERAEM-DAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K + G  WG Q+RSYVLQPYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 KGDGGSSWGTQMRSYVLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGI 359


>gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
 gi|149834234|gb|EDM89314.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
          Length = 335

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/321 (47%), Positives = 216/321 (67%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W N   ++  M+E + + + +     ++ ++ D   ++E+  EE+D  I+ E  +
Sbjct: 2   EAPDFWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYEENDPEIIPEIQE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   +   +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML RMY+RW +++ F
Sbjct: 62  MLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DG+EAG+KS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH
Sbjct: 182 VMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NK +A  ML+AKLY L+ Q+ E   +      T+IGWG QIRSYV+QPY MVKD RT+ 
Sbjct: 242 MNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTSE 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDGD+D F+ A L
Sbjct: 302 ETGNVDAVLDGDIDPFINAYL 322


>gi|312877708|ref|ZP_07737662.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795509|gb|EFR11884.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 316

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 164/307 (53%), Positives = 219/307 (71%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L + I   +++  +  D  +L EL+L+E +  + +E    L  ++ ++E  + E
Sbjct: 1   MQKIKRLKDKIERFQKLYSQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL+G  D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGI
Sbjct: 61  VLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I G NAYG+LK E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E
Sbjct: 121 KNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL 
Sbjct: 181 EDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLL 240

Query: 286 EL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           EL E ++RE+I  + +  +TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D
Sbjct: 241 ELKEKERREKIQKL-KGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEID 299

Query: 345 DFMKATL 351
            F+ A L
Sbjct: 300 VFINAYL 306


>gi|223038905|ref|ZP_03609197.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
 gi|222879878|gb|EEF14967.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
          Length = 366

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 172/357 (48%), Positives = 233/357 (65%), Gaps = 10/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+   ++   RL  +     D + WQ++ +A  + +E+  + N ++     
Sbjct: 13  LNTKIENIAGVVKPESIKTRLKEIEELENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAY 118
           +  + D   L ELA  E+D    +ET ++L     E+E K    +   LLSGE D  +A 
Sbjct: 73  KSAVDDAKDLYELANSEND----EETINSLFAEAGELEDKIVNLEISMLLSGEDDGKNAI 128

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + +H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAY
Sbjct: 129 VTIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAY 188

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E G+HRLVR SP+DS  RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GA
Sbjct: 189 GYLKAENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGA 248

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML+++LYELEL K++E A  
Sbjct: 249 GGQHVNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA-- 306

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G   K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 307 GSIEKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363


>gi|258645336|ref|ZP_05732805.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
 gi|260402685|gb|EEW96232.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
          Length = 330

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 159/324 (49%), Positives = 215/324 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W+N   AK + ++      A      +  R      LL++A+EE+D  +  E  + 
Sbjct: 3   DPSFWENGDHAKEISQKATEAKAAYDTYTRLFARAESIKELLDMAIEENDQDMEGELEEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +K  ++ K+ E LL+ E D+NDA +  HAGAGGTE+QDW  ML+RMY +WAE   F 
Sbjct: 63  INELKDILDKKEIELLLNDEYDANDAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEGFV 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L +  G+EAG+KSA  +++G  AYG LK E+GVHRLVRISP+D+  RRHTSFS++ V
Sbjct: 123 LEELNMLPGDEAGVKSAEYMVRGKFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + D IEI+++ +D R+D YRASGAGGQH+N T SAVR+THIPTG+V  CQ ERSQ +
Sbjct: 183 MPEIGDDIEIDLNMADVRVDYYRASGAGGQHINKTSSAVRMTHIPTGIVAACQNERSQFQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK Q   +L+AKL+ELE+QKRE++    E  +  I WG QIRSYV QPY +VKD RT IE
Sbjct: 243 NKEQCLRLLKAKLFELEMQKREQVKKGIEGEQQAIEWGSQIRSYVFQPYTLVKDNRTGIE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   V+DG L+ F++  L  KK
Sbjct: 303 TGNIQSVMDGGLNPFIEGFLKHKK 326


>gi|167855181|ref|ZP_02477952.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219871045|ref|YP_002475420.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
 gi|167853726|gb|EDS24969.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219691249|gb|ACL32472.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
          Length = 248

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 146/245 (59%), Positives = 190/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD  +IEI+ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDFDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKKNAEKQAMEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|197123211|ref|YP_002135162.1| LigA [Anaeromyxobacter sp. K]
 gi|196173060|gb|ACG74033.1| LigA [Anaeromyxobacter sp. K]
          Length = 372

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 159/330 (48%), Positives = 226/330 (68%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LSR+L  L G  D +    R++ ++  +EDP  W + ++A+ L++E+  L+        
Sbjct: 11  ELSRRLEALRGSLDVERKELRVAEISKLSEDPAFWTDNVKAQALLKEKAQLEQVTQACAA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +EV
Sbjct: 71  VRRALDDAQALSELAEEARDDATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGWL
Sbjct: 131 KSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGGQ
Sbjct: 191 KAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VN TDSAVR+TH+PTG+VV  Q ERSQ KN++ AW +LRAKLY+LE +KR    +  E+
Sbjct: 251 KVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
            K +I +G QIRSYVLQPYQMVKDLRT +E
Sbjct: 311 LKKDIDFGSQIRSYVLQPYQMVKDLRTGVE 340


>gi|182416046|ref|YP_001821112.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
 gi|177843260|gb|ACB77512.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
          Length = 341

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 163/324 (50%), Positives = 219/324 (67%), Gaps = 7/324 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLI-LLELALEEDDCSILQE 87
           P  W +   A+  + +   L  A+    +F K+++D   D ++ L+E A E +  S  QE
Sbjct: 4   PTFWDSNERAQKHIAKLNGLKKAVLPVVAFHKKVED--LDVMVELVEAASEGERESYAQE 61

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
              N+  +  E++  +  S L+G+ D N+A L + +GAGGTES DWA+ML RMY RWAE+
Sbjct: 62  LDSNVTAMVEELDALEIASFLTGQFDRNNAILSIQSGAGGTESNDWADMLFRMYNRWAER 121

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R F  E  ++  G++AGI  ATLLIKG NAYG+ K E+GVHRLVRISP+D+N RRHTSF 
Sbjct: 122 RGFSIEVQDVQAGDQAGITKATLLIKGENAYGYAKAERGVHRLVRISPFDANKRRHTSFC 181

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + + +++EI+E+D RID YR+SG GGQ VNTTDSAVRITH+ +G+VV CQ ER
Sbjct: 182 AVDVVAEITEDVDVEINENDLRIDVYRSSGKGGQGVNTTDSAVRITHLSSGIVVVCQNER 241

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KNKA A N+L+A+LYE +  ++    +     K EIGWG QIRSYVLQPYQMVKDLR
Sbjct: 242 SQLKNKAAAMNVLKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDLR 301

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T +  +    VLDGDLD F+ A L
Sbjct: 302 TGVSTSDTQGVLDGDLDRFVNAWL 325


>gi|255323494|ref|ZP_05364625.1| peptide chain release factor 2 [Campylobacter showae RM3277]
 gi|255299531|gb|EET78817.1| peptide chain release factor 2 [Campylobacter showae RM3277]
          Length = 366

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 172/357 (48%), Positives = 233/357 (65%), Gaps = 10/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+   ++   RL  +     D + WQ++ +A  + +E+  + N ++     
Sbjct: 13  LNTKVENIAGVVKPESIKARLKEIEEMENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAY 118
           +  + D   L ELA  E+D    +ET ++L     E+E K    +   LLSGE D  +A 
Sbjct: 73  KSAVDDAKELYELANSEND----EETINSLFAEADELEDKIVNLEISMLLSGEDDGKNAI 128

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + +H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAY
Sbjct: 129 VTIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAY 188

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E G+HRLVR SP+DS  RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GA
Sbjct: 189 GYLKAENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGA 248

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML+++LYELEL K++E A  
Sbjct: 249 GGQHVNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA-- 306

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G   K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 307 GSIEKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363


>gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
          Length = 339

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 155/321 (48%), Positives = 219/321 (68%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W    ++  ++RE ++L + +   + ++ +  D  +++++  EE+D S++ E  +
Sbjct: 2   EEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIEE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L++ K  +E  + + LLSGE DSN+A L ++AGAGGTES DW ++L RMY RWAE + F
Sbjct: 62  MLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K   L+  DGEEAGIKS T+ I G NAYG+L+ E GVHRLVRISP++S  +R TSF S  
Sbjct: 122 KAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ I+IE++  D R+DTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ 
Sbjct: 182 VMPNIEEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKL  ++ +++   A        +IGWG QIRSYVLQPY MVKD RT  
Sbjct: 242 QNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTGE 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDG +D+F+ A L
Sbjct: 302 ESGNVDAVLDGAIDNFISAYL 322


>gi|42562784|ref|NP_176032.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana]
          Length = 482

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 218/340 (64%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   + RL  L+ +     LW +   A  + RE   L   +  +   +  L +++ +L
Sbjct: 133 LQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDML 192

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA EE+D  +  ET   L  ++   + K+ E+LLS + D    Y+EV AGAGGTES DW
Sbjct: 193 KLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDW 252

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY  WA++RKF    ++   GE AGIK AT+ + G  AYG+ K E GVHRLVRI
Sbjct: 253 AAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRI 312

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S  +EI++SD RI+ +R+ GAGGQH NTTDSAVRI
Sbjct: 313 SPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRI 372

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      S TEI WG QI
Sbjct: 373 VHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQI 432

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 433 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 472


>gi|15616167|ref|NP_244472.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
 gi|10176229|dbj|BAB07324.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
          Length = 288

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 166/282 (58%), Positives = 209/282 (74%), Gaps = 2/282 (0%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +  EL  EE D  + QE    L+ +  E+   + + LL+   D N+A LE+H GAGGTES
Sbjct: 3   VSYELCKEETDADLQQELEQGLKGLVKELNEFELQLLLNEPYDKNNAILELHPGAGGTES 62

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMYTRWAE + +K E L+   G+EAG+KS TLLIKG NAYG+LK E+GVHRL
Sbjct: 63  QDWASMLLRMYTRWAENKGYKVETLDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRL 122

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS+ RRHTSF S  V P +DDS+EIEIS  D +IDTYR+SGAGGQHVNTTDSAV
Sbjct: 123 VRISPFDSSGRRHTSFVSCEVMPELDDSVEIEISTEDLKIDTYRSSGAGGQHVNTTDSAV 182

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITH+PT  VV CQ ERSQ KN+ +A  ML+AKL +L+L++++ E+A I    + EIGWG
Sbjct: 183 RITHLPTNTVVTCQSERSQIKNRERAMKMLQAKLLQLKLEEQQKELAEI-RGEQKEIGWG 241

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV  PY MVKD RTN+E  + + V+DG++D F+ A L
Sbjct: 242 SQIRSYVFHPYSMVKDHRTNVEVGNTNAVMDGEIDSFIDAYL 283


>gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
 gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
          Length = 323

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 157/318 (49%), Positives = 220/318 (69%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    QE    ++ 
Sbjct: 6   FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAQEIISEVKA 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ +  E 
Sbjct: 65  LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ  N+ 
Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN E +
Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNFETS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DGD+D+F+ A L
Sbjct: 304 NVNGVMDGDIDNFIIAYL 321


>gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
 gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
          Length = 323

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 156/318 (49%), Positives = 222/318 (69%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E  + ++ 
Sbjct: 6   FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIINEVKA 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ +  E 
Sbjct: 65  LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ  N+ 
Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN+E +
Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DGD+D+F+ A L
Sbjct: 304 NVNGVMDGDIDNFIIAYL 321


>gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 426

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 158/340 (46%), Positives = 218/340 (64%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   + RL  L+ +     LW +   A  + RE   L   +  +   +  L +++ +L
Sbjct: 77  LQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDML 136

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA EE+D  +  ET   L  ++   + K+ E+LLS + D    Y+EV AGAGGTES DW
Sbjct: 137 KLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDW 196

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY  WA++RKF    ++   GE AGIK AT+ + G  AYG+ K E GVHRLVRI
Sbjct: 197 AAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRI 256

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S  +EI++SD RI+ +R+ GAGGQH NTTDSAVRI
Sbjct: 257 SPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRI 316

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      S TEI WG QI
Sbjct: 317 VHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQI 376

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 377 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 416


>gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1]
 gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1]
          Length = 343

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 157/332 (47%), Positives = 226/332 (68%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++R+  L+   E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE
Sbjct: 1   MKRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEE 60

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           +D S++ E    +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML R
Sbjct: 61  NDPSLIPEIQGMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYR 120

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWA+K+ F T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S 
Sbjct: 121 MYQRWADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSA 180

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            +R TSF S  V P + + +++EI+  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+
Sbjct: 181 GKRQTSFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGI 240

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VVQCQ ERSQ +NK  A  ML+ KLY L+ ++  E  +       +I +G QIRSYV+QP
Sbjct: 241 VVQCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQP 300

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y +VKD RT  E  + + VLDGD+D F+ A L
Sbjct: 301 YTLVKDHRTGAESGNVNAVLDGDIDLFISAYL 332


>gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
 gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
          Length = 329

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 157/324 (48%), Positives = 223/324 (68%), Gaps = 2/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K ++P+ W ++  A+ +  E + L+  +    +++ R+ D  IL  +A EE+D S  ++ 
Sbjct: 2   KMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEEEEDVSDCKDI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              ++ I+  ++  + E LLSGE D N+A L +H G GGT++QDW  MLLRMYTRWAEK 
Sbjct: 62  LSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWAEKS 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E L+I   ++AGIKS +L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S
Sbjct: 122 GYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +    +I+I   D R+DTYR+SGAGGQHVN T+SAVRITHIPTG+VVQCQ ERS
Sbjct: 182 VEVLPELTKDQDIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 241

Query: 269 QHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           QH N+  A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD R
Sbjct: 242 QHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELK-DMGWGSQIRSYVFHPYTLVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T +E  + S V+DG++D+F+ A L
Sbjct: 301 TGVENGNVSSVMDGEIDNFILAYL 324


>gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 322

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 167/316 (52%), Positives = 217/316 (68%), Gaps = 14/316 (4%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSI-----LQETSDNLQRIKLEV 99
           M++R+ L+ A++   +I+  L D+L  + ELA E +         L+  S+ L+R++  +
Sbjct: 1   MQDRKRLEEAVANDDQIR-ALTDDLDTMFELAREGEPVQADIERDLKPYSELLERLETAM 59

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  LLSGE D+  A + +H GAGGTESQDWA MLLRMY RWAE+ KF T   +  +
Sbjct: 60  -------LLSGENDARSAIVTIHPGAGGTESQDWAEMLLRMYLRWAEREKFATVITDRLE 112

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GE AGIKS T  + G NAYG L+ E GVHRLVRISP+D+N+RRHTSF+S++V+P VDD I
Sbjct: 113 GEGAGIKSVTFEVNGENAYGLLQSEIGVHRLVRISPFDANARRHTSFASVFVFPQVDDEI 172

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +I+I + D RIDT+RASGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQHKN+A A   
Sbjct: 173 KIDIQDKDLRIDTFRASGAGGQHVNMTDSAVRITHFPTGIVVQCQNERSQHKNRATAMKQ 232

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           LRA LYE EL+K+       E SK EI +G QIR+YVL PY++VKDLR+ +       VL
Sbjct: 233 LRACLYEHELEKKRAETRETEDSKLEINFGSQIRNYVLAPYRLVKDLRSKLALGDVDRVL 292

Query: 340 DGDLDDFMKATLAIKK 355
           +G LD  + + L  +K
Sbjct: 293 EGGLDPLIHSYLVWRK 308


>gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 371

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 165/357 (46%), Positives = 234/357 (65%), Gaps = 8/357 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAIS 57
           ++ ++L  +GG  D +    R+  L  KT  P  W +  EA+ +++E    ++ +D+  S
Sbjct: 12  EIKKRLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYES 71

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            ++EI+D         ELA  E+D  + +E +  L R+       +   +  GE D ++A
Sbjct: 72  LVREIEDISALL----ELAEAEEDEELYREAAAELARLNRRFREYELSIMFKGEHDDSNA 127

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + +HAGAGGT++QDW  MLLRMYTRWAE   ++ + ++   GEEAGIKS TLLIKG  A
Sbjct: 128 IVSLHAGAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYA 187

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG ++ E GVHRL+R+SP+D++ RRHTSF+ + V P + D +E+ IS  D RIDT+RA G
Sbjct: 188 YGKMRAEAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGG 247

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN TDSAVRITH+P+G+VVQCQ ERSQ+ NK  A  +LRAKLYEL+ +++EE   
Sbjct: 248 AGGQHVNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQ 307

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +    EI WG QIR+YVL P+ +VKD RT +E  + + VLDGD++DF+ A L  K
Sbjct: 308 KLKGEYKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQK 364


>gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16]
          Length = 361

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 164/343 (47%), Positives = 226/343 (65%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD +   + L+ L+ +      W +   A+ + +E + L +     +E++ RL D 
Sbjct: 14  FGGIFDIETRQKTLASLDEEMASNEFWNDRQRAEQVTKEARTLRDLTQPWQELKGRLDDL 73

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLEL+ +EDD   L++    L  +   +   +F S+LS E D  DA L +H+GAGGTE
Sbjct: 74  AELLELSADEDDADTLKDLQIELSDVDETLGELEFFSMLSDEDDPKDALLVIHSGAGGTE 133

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA ML+RMY RW E+R F +E +++  G+EAGIK AT+ +KG  AYG+LK E GVHR
Sbjct: 134 AADWAEMLMRMYGRWIERRGFTSEIMDLQPGDEAGIKGATIEVKGSYAYGYLKAEAGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+D+N RRHTSF+S++VYP VD   ++E+ + D +IDTY+A GAGGQHVN T SA
Sbjct: 194 LVRISPFDANKRRHTSFASVFVYPDVDSIPDVELRDEDLQIDTYKAGGAGGQHVNKTSSA 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ ERSQ KNK  A  +L A+LY+   Q+  +     ES+K  I +G
Sbjct: 254 VRITHLPTGIVVNCQNERSQLKNKGTAMKVLTARLYDHYKQEEMKKMEAVESTKKAIDFG 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYV QPY +VKD RT  E  +   ++DGDLD F+ A L+
Sbjct: 314 SQIRSYVFQPYTLVKDHRTGHESGNVQAIMDGDLDGFINAFLS 356


>gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
 gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
          Length = 323

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 156/318 (49%), Positives = 221/318 (69%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E    ++ 
Sbjct: 6   FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ +  E 
Sbjct: 65  LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ  N+ 
Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN+E +
Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DGD+D+F+ A L
Sbjct: 304 NVNGVMDGDIDNFIIAYL 321


>gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa]
 gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa]
          Length = 488

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 155/340 (45%), Positives = 222/340 (65%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   + RL  L+ +   P LW + + A  + RE   L   +  ++ ++  L +++ ++
Sbjct: 135 LQWKKLMVRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTLEQELLEHIDMI 194

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA EEDD  +  E    L +++     K+ E+LLSGE DS   Y+EV AGAGGTES DW
Sbjct: 195 KLAREEDDNELESEMLKALLQMRRNSNEKEQEALLSGEQDSCPCYIEVQAGAGGTESMDW 254

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M+++MY  WA++  +    ++   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 255 AKMVMQMYKSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAKAEAGVHRLVRI 314

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D    + I+ESD RI+ +RA GAGGQHVNTT+SAVRI
Sbjct: 315 SPFDSGKRRHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQHVNTTESAVRI 374

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+   CQ ERSQH NK  A  +L+++L + E+ ++ ++      S T+IGWG QI
Sbjct: 375 VHIPTGITATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQSLTDIGWGNQI 434

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYVL PY+MVKDLRTN E T+P  VL+G++D F+ + L+
Sbjct: 435 RSYVLHPYRMVKDLRTNYEVTNPDSVLEGEIDGFILSYLS 474


>gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
 gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
          Length = 338

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 153/321 (47%), Positives = 217/321 (67%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W +  ++  ++RE ++L + +   +E++    D  +++++  EE+D S++ +  +
Sbjct: 2   EEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEENDASVIPDIQE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L      +E  + + LLSGE D N+A L ++AGAGGTES DW +ML RMY RWAE++ F
Sbjct: 62  MLDHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+  DG+EAGIKS T+ + G NAYG+L+ E GVHRLVRISP+++  +R TSF S  
Sbjct: 122 KYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P ++  +++E++  D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ 
Sbjct: 182 VMPDIEADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKLY L+ Q+    A        +IGWG QIRSYVLQPY MVKD RT  
Sbjct: 242 QNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRTGE 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDG +D F+ A L
Sbjct: 302 ESGNVDAVLDGSIDSFISAYL 322


>gi|115311854|sp|Q4L4H9|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 371

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 165/342 (48%), Positives = 228/342 (66%), Gaps = 3/342 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G  D++N    +        +P  W +  +A+ ++ +   L + ++   E+++ + D   
Sbjct: 22  GSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTA 81

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL  EE D  +  +   N+   K +V+  + + LL G  D+N+A LE+H GAGGTESQ
Sbjct: 82  TWELLQEELDGDVKSDLEQNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQ 141

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY R+ E++ FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLV
Sbjct: 142 DWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLV 201

Query: 192 RISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           RISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+
Sbjct: 202 RISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAI 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITH PTG+VV  Q ERSQ KN+  A  ML+AKLY+L+L+++E E+A I    + EIGWG
Sbjct: 262 RITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEI-RGEQKEIGWG 320

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV  PY MVKD RTN E      V+DG++  F+++ L
Sbjct: 321 SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYL 362


>gi|259501054|ref|ZP_05743956.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|309807259|ref|ZP_07701230.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|309808840|ref|ZP_07702723.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|312874339|ref|ZP_07734370.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|312875084|ref|ZP_07735101.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|325911468|ref|ZP_08173880.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
 gi|259167748|gb|EEW52243.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|308166350|gb|EFO68558.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|308167916|gb|EFO70051.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|311089374|gb|EFQ47801.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|311090105|gb|EFQ48518.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|325476818|gb|EGC79972.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
          Length = 359

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 162/352 (46%), Positives = 222/352 (63%), Gaps = 14/352 (3%)

Query: 8   NC--LGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAISFI 59
           NC  LGGLFD+DN  + ++    K  D   W      Q +IEA   MRE+      +   
Sbjct: 4   NCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------VDKY 57

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + +   L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A L
Sbjct: 58  QTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALL 117

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+H+GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G
Sbjct: 118 EIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFG 177

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAG
Sbjct: 178 LLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAG 237

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     
Sbjct: 238 GQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEAL 297

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + ++ EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L
Sbjct: 298 KGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349


>gi|309803856|ref|ZP_07697941.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325913296|ref|ZP_08175664.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|329920534|ref|ZP_08277266.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
 gi|308164090|gb|EFO66352.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325477399|gb|EGC80543.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|328936210|gb|EGG32663.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
          Length = 359

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 160/355 (45%), Positives = 222/355 (62%), Gaps = 12/355 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAI 56
           +    + LGGLFD+DN  + ++    K  D   W      Q +IEA   MRE+      +
Sbjct: 1   MKNNYHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------V 54

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
              + +   L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++
Sbjct: 55  DKYQTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHN 114

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A LE+H+GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G N
Sbjct: 115 ALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNN 174

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A+G LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+S
Sbjct: 175 AFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSS 234

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +  
Sbjct: 235 GAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQT 294

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + ++ EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L
Sbjct: 295 EALKGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349


>gi|220905200|ref|YP_002480512.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869499|gb|ACL49834.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 370

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 158/344 (45%), Positives = 221/344 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++   L G  D   + +RL  + T+   P  W        L++E++ L++ ++ + ++
Sbjct: 14  LAQRFASLWGRLDVAASEKRLQAIETEISRPGAWDKPEALTPLLQEKRRLEDEVARLNKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D    L LA E +D   L+  +   + +   ++  +   LLS E DS DA LE+H
Sbjct: 74  KTCHDDMNEWLALAAESEDPEALESLAQQQKDLAALLDETELVMLLSAEEDSQDAILEIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMYTRWA    +K E L+   G+EAG+KS TL + GP+A+G+LK
Sbjct: 134 PGAGGTESQDWAEMLLRMYTRWAADHDYKVEELDFLPGDEAGVKSVTLRVGGPHAFGFLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRL+RISP+DS+ RRHTSF+S+ V P   D IE+++ E+D R+D +R+SG GGQ 
Sbjct: 194 SERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIELDLKEADLRVDIFRSSGPGGQS 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITHIP+G+  QCQ E+SQH NK  A  +LRA+LY +EL+KRE       + 
Sbjct: 254 VNTTSSAVRITHIPSGISAQCQNEKSQHHNKETALRVLRARLYNMELEKREAARQAQYAG 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           K  I +G QIR+Y LQPY++VKD RT  E      VLDG +D F
Sbjct: 314 KDAIAFGSQIRTYTLQPYRLVKDHRTGTEVGDVDAVLDGQIDAF 357


>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
          Length = 369

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 166/358 (46%), Positives = 237/358 (66%), Gaps = 9/358 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAIS 57
           +L + L+ +G   + +     +  +  +T + + W +  +A+ +M +    + +     S
Sbjct: 13  ELDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTS 72

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           F +E++D+  D L ++E + E  D   L E  + L  +K E+   + ++ L GE D N+A
Sbjct: 73  FKEELKDQ-SDLLDIIEESNE--DLESLNEIEEILNSLKKEIGSFKIKTELDGEYDKNNA 129

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL +HAGAGG E+ DWA ML+RMYTR+ EKR FK +  ++++ E  GIKSAT+ +KG  A
Sbjct: 130 YLVIHAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFA 189

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+LKGE+GVHRLVRISP+DS+ RRHTSF+S+ ++P ++D + +EI   D RIDTYRASG
Sbjct: 190 YGYLKGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDDMSVEIDPKDLRIDTYRASG 249

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIA 296
           AGGQHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL ++ E + RE+I 
Sbjct: 250 AGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIE 309

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I + + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+   LA K
Sbjct: 310 DI-QGNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLANK 366


>gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 332

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 164/322 (50%), Positives = 222/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  +A+ ++ +   L + ++   E+  +L D     EL  EE D  I ++   +
Sbjct: 4   EPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDLEQD 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   + +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ FK
Sbjct: 64  IVSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 IETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P  D D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 184 IPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++E E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F++A L
Sbjct: 303 EETAKVDAVMDGDIAPFIEAYL 324


>gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 352

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 155/336 (46%), Positives = 225/336 (66%), Gaps = 2/336 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R+  L+ +  DP  W +   A+ + +E   L   +   + + +++ D    LELA+EE 
Sbjct: 6   ERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAMEEK 65

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+  +     + +  EVE ++   LLSGE D  +A +  HAGAGGTE+QDW  ML+RM
Sbjct: 66  DTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQMLIRM 125

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTRWAE+  +    +++  G+EAG+KSAT  + G  AYG+LK E+GVHRLVRISP+D+ +
Sbjct: 126 YTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFDAAA 185

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+++ V P + D ++++I+  + R+D +RASGAGGQHVN T SAVR+TH+PTG+V
Sbjct: 186 RRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTGIV 245

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIRSYVLQP 319
           VQCQ ERSQ +NK      LRAKL+ELE +K+ ++ A IG + +  I WG QIRSYV  P
Sbjct: 246 VQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQA-IEWGSQIRSYVFHP 304

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y +VKD RT++E  +   V+DG+LD F++  L  +K
Sbjct: 305 YNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREK 340


>gi|258616656|ref|ZP_05714426.1| peptide chain release factor 2 in translation [Enterococcus faecium
           DO]
          Length = 246

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 149/241 (61%), Positives = 186/241 (77%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  ++ E L+   G+EAGIKS TLLI
Sbjct: 3   DRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLI 62

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG NA+G+LK E+GVHRLVRISP+DS  RRHTSF S+ V P +D++I+IEI+  D +IDT
Sbjct: 63  KGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDT 122

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N T+SAVRITH+PTG VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+
Sbjct: 123 YRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKK 182

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E+ A      + EIGWG QIRSYV  PY MVKD RTN+E  +   V+DGDLD F+   L 
Sbjct: 183 EQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 242

Query: 353 I 353
           +
Sbjct: 243 M 243


>gi|240949505|ref|ZP_04753845.1| peptide chain release factor 2 [Actinobacillus minor NM305]
 gi|240296078|gb|EER46739.1| peptide chain release factor 2 [Actinobacillus minor NM305]
          Length = 248

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 146/245 (59%), Positives = 190/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
 gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
          Length = 329

 Score =  315 bits (808), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 153/277 (55%), Positives = 196/277 (70%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE D  +  E    + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +ML
Sbjct: 49  EEADPEMEAELDARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSML 108

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMYTR+ E+  ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHR VRISP+D
Sbjct: 109 LRMYTRFCEQHGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRFVRISPFD 168

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  RRHTSF S+ V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIP 
Sbjct: 169 SAKRRHTSFCSVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPK 228

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV 
Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVF 288

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PY MVKD RTN E  +   V+DGDLD F+ A L +K
Sbjct: 289 HPYSMVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|313906145|ref|ZP_07839494.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
 gi|313469032|gb|EFR64385.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
          Length = 332

 Score =  315 bits (808), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 164/321 (51%), Positives = 216/321 (67%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W N  EA+   +E   L N      ++     D  +++E+  EEDD SI+ E  +
Sbjct: 2   EEPDFWNNPDEAQKQTKELGDLKNDRDTYAKLVSTKEDIEMMIEMGEEEDDESIVPEVRE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L      ++  + ++LLS E D N+A + ++AGAGGTE+ DW  ML RMYTRWAE++ F
Sbjct: 62  MLDDFIETLDGVRIKTLLSEEYDVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAERKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L++ +G+EAGIKS    + G NAYG LK E GVHRLVRISP+++ ++R TSF S  
Sbjct: 122 AIEELDMQEGDEAGIKSVMFQVNGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P ++D I+IE+ + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ 
Sbjct: 182 VMPELNDDIDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  +L+AKLY LE +K+ E A       T+I WG QIRSYVLQPY MVKDLRTN 
Sbjct: 242 QNKDKAMQVLKAKLYMLEQEKQAEKAAGIRGEVTDIAWGHQIRSYVLQPYTMVKDLRTNA 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           EK   S VLDGDLD F+ A L
Sbjct: 302 EKAQASAVLDGDLDPFINAYL 322


>gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
 gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
          Length = 323

 Score =  315 bits (807), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 156/318 (49%), Positives = 221/318 (69%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E    ++ 
Sbjct: 6   FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+++  E 
Sbjct: 65  LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKEYSLET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ  N+ 
Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN E +
Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNFETS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DGD+D+F+ A L
Sbjct: 304 NVNGVMDGDIDNFIIAYL 321


>gi|309804632|ref|ZP_07698697.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
 gi|308166024|gb|EFO68242.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
          Length = 359

 Score =  315 bits (807), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 162/352 (46%), Positives = 222/352 (63%), Gaps = 14/352 (3%)

Query: 8   NC--LGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAISFI 59
           NC  LGGLFD+DN  + ++    K  D   W      Q +IEA   MRE+      +   
Sbjct: 4   NCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------VDKY 57

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + +   L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A L
Sbjct: 58  QTLSAALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALL 117

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+H+GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G
Sbjct: 118 EIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFG 177

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAG
Sbjct: 178 LLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAG 237

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     
Sbjct: 238 GQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEAL 297

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + ++ EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L
Sbjct: 298 KGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349


>gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           COL]
 gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|56749392|sp|Q6GB76|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749443|sp|Q7A6R4|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749454|sp|Q99VM1|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153100|sp|Q5HHR5|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115311853|sp|Q2YSH5|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040005|sp|A6TZN3|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus COL]
 gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 369

 Score =  315 bits (807), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 167/352 (47%), Positives = 229/352 (65%), Gaps = 3/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++ L  + G  D +N    +        +P+ W N  +A+ ++ +   L   ++  K 
Sbjct: 12  KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D     +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+
Sbjct: 72  LQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIG 299
           QH+N T+SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++  E+A I 
Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI- 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L
Sbjct: 311 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 362


>gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 335

 Score =  315 bits (807), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 154/321 (47%), Positives = 224/321 (69%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W +   +   +RE ++L + +   + ++ +  D  I++E+  EE+D S++ E  +
Sbjct: 2   EEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L      +E  + ++LLSGE D+ +A L+++AGAGGTE+ DW +ML RMY RWA+K+ +
Sbjct: 62  MLDEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE L+  DG+EAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++IE+++ D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ 
Sbjct: 182 VMPDIEEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKLY L+ Q+  E  +       +I +G QIRSYV+QPY +VKD RTN 
Sbjct: 242 QNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTNA 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + V+DGD+D F+ A L
Sbjct: 302 ENGNVNAVMDGDIDLFISAYL 322


>gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 327

 Score =  315 bits (807), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 155/322 (48%), Positives = 220/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W N+ EA+ +  E ++L + +     +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 SIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH
Sbjct: 181 VLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321


>gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
 gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
          Length = 373

 Score =  315 bits (807), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 222/331 (67%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL+ L  +   P  + +  +++ ++ E   + N +    ++  +  +   LLE+  EE+
Sbjct: 32  KRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKLSTQYEEAETLLEMIEEEN 91

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+  E    ++ ++  ++  Q  ++L+GE D N+A L  HAG GGTE+QDWA ML RM
Sbjct: 92  DPSLASEGEQAVEGVEKAIDELQLMTMLNGEYDHNNAILTFHAGTGGTEAQDWAEMLYRM 151

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTRWAE   +  E L++ DG+EAGIKSA+++IKG NAYG LK E GVHRLVRISP+D+N+
Sbjct: 152 YTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLKSEHGVHRLVRISPFDANA 211

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RR TSF+S+ V P ++D+I+IEI+ +D  +  YR+SGAGGQH+N T SAVR+ H PTG+V
Sbjct: 212 RRQTSFASLEVMPELNDNIQIEINPADIEMQVYRSSGAGGQHINKTSSAVRLIHKPTGIV 271

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
             CQ +RSQ +N+  A  M++AKLY++ LQ+ ++  +  +  + EI WG QIRSYV  PY
Sbjct: 272 TSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGVQNEIAWGHQIRSYVFMPY 331

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +VKD RTN E  +   V+DGDLD F+ A L
Sbjct: 332 TLVKDHRTNYESGNVQAVMDGDLDGFIYAYL 362


>gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
 gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
          Length = 332

 Score =  315 bits (807), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 160/318 (50%), Positives = 215/318 (67%), Gaps = 2/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-ILQETSDNLQ 93
            W +   AK  +     L + +   KE++ R+ D + L EL  EE   S ++ +  +   
Sbjct: 6   FWDDSNAAKSTVDRVSALKSVVVPYKELEARVEDFITLSELIEEEGASSELMDDAGEESP 65

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            ++  ++  +  S LSG+ DS   +L ++AGAGGTES DWA+MLLRMY RWAE + FK  
Sbjct: 66  ELEKALDDLELLSFLSGKYDSGSCFLSINAGAGGTESCDWADMLLRMYRRWAESKGFKVT 125

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            + I +GEEAGIK+ T+ I+GP A+G+LK E+GVHRLVR+SP+DSN RRHTSF+SI V P
Sbjct: 126 FVSILEGEEAGIKNCTMFIEGPMAFGYLKAERGVHRLVRVSPFDSNKRRHTSFTSIDVVP 185

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            + D  E++I   D R+DT+RASGAGGQHVNTTDSA+R+TH+PTG+VV CQ ERSQHKN+
Sbjct: 186 DIGDEAEVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQMERSQHKNR 245

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           A A  ML AKL EL+  +RE   +     K +IGWG QIRSYVL   + VKD RTN   +
Sbjct: 246 ATAMKMLGAKLEELKQAEREAELDANAGEKNDIGWGSQIRSYVLDDRR-VKDHRTNHSTS 304

Query: 334 SPSDVLDGDLDDFMKATL 351
           +   VLDGD+D F+++ L
Sbjct: 305 NTDKVLDGDIDPFIQSFL 322


>gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
 gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
          Length = 359

 Score =  315 bits (807), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 162/352 (46%), Positives = 222/352 (63%), Gaps = 14/352 (3%)

Query: 8   NC--LGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAISFI 59
           NC  LGGLFD+DN  + ++    K  D   W      Q +IEA   MRE+      +   
Sbjct: 4   NCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------VDKY 57

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + +   L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A L
Sbjct: 58  QTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNDYELHLLLSGKYDDHNALL 117

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+H+GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G
Sbjct: 118 EIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFG 177

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAG
Sbjct: 178 LLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAG 237

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     
Sbjct: 238 GQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEAL 297

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + ++ EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L
Sbjct: 298 KGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349


>gi|134302701|ref|YP_001122669.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050478|gb|ABO47549.1| Peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 327

 Score =  315 bits (807), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 169/323 (52%), Positives = 228/323 (70%), Gaps = 5/323 (1%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + P V  D  I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 182 ISPEVDDDIDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL   + +KDLRT
Sbjct: 242 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
            +E T+   VLDGDLD F++A+L
Sbjct: 301 GVENTNTQAVLDGDLDKFIEASL 323


>gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016]
 gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
 gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           reuteri DSM 20016]
 gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
          Length = 332

 Score =  315 bits (806), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 158/319 (49%), Positives = 210/319 (65%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ ++ E   L         ++D++ D    LEL   E D  + +E   + 
Sbjct: 4   PDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAVEPDDDLQKEFEASF 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
              +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  F  
Sbjct: 64  TNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHGFSV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+ V 
Sbjct: 124 ETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDS+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V   Q ERSQ +N
Sbjct: 184 PELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQLQN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT  E 
Sbjct: 244 RVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTGYET 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   V+DGDLD F+ A L
Sbjct: 304 HNGQAVMDGDLDPFIDAFL 322


>gi|226226984|ref|YP_002761090.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
 gi|226090175|dbj|BAH38620.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
          Length = 335

 Score =  315 bits (806), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 163/320 (50%), Positives = 219/320 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +   A+ ++++ + L   +     +Q R+     L EL   E D  +  +    
Sbjct: 3   DPAFWNDQEHAREIVQQVKVLKGWVEPSDSLQSRIDSARELDELLSLEPDKGMNADLDQE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +QRI  +++  + +SLL G  D  DA LE+ AGAGGTE+QDWA+MLLR+YTRWAE++ F 
Sbjct: 63  VQRILADLDAFELKSLLRGNDDYRDAQLEISAGAGGTEAQDWASMLLRLYTRWAERKGFD 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L++ DGEEAGIK A L IKG  AYG+L+ E GVHRLVRISP+DS +RRHTSF+S++V
Sbjct: 123 LEVLDLSDGEEAGIKGAVLEIKGQYAYGFLRPESGVHRLVRISPFDSQARRHTSFASVFV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YPVV++ I IEI E D RID YRASGAGGQHVN T SAVRITHIP+G+V   QQERSQ K
Sbjct: 183 YPVVNEEINIEIREEDLRIDVYRASGAGGQHVNKTSSAVRITHIPSGIVCASQQERSQFK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NKA A   L+ +LY+LE++K+  +    +++K ++ +G QIRSYV QPY MV D R+ ++
Sbjct: 243 NKATAMKQLKNRLYQLEIEKQAAVKAAFDANKQDVTFGSQIRSYVFQPYTMVNDHRSELK 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD+D F+ A L
Sbjct: 303 IADVQKVMDGDIDPFIHAYL 322


>gi|331000229|ref|ZP_08323913.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
 gi|329572395|gb|EGG54048.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
          Length = 280

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 206/277 (74%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EEDD + L+    ++  +K EVE+ +F+ + + E D  + +LE+ AGAGGTE+QDWA
Sbjct: 1   MAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML RMY ++AE++ FK E +E  +G+ AGIK  T+ I G  AYGWL+ E G+HRLVR S
Sbjct: 61  SMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+  TDSAVRITH
Sbjct: 121 PFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+V   Q  RSQH+NK +A  +L+++LYE EL+KR+      E +K++I WG QIRS
Sbjct: 181 IPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL   + VKDLRTN+E  + + VLDG L+ F++A+L
Sbjct: 241 YVLDQSR-VKDLRTNVETGNTTAVLDGALESFIEASL 276


>gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
 gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
          Length = 347

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 161/341 (47%), Positives = 218/341 (63%), Gaps = 2/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD +   + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ 
Sbjct: 4   GGLFDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESE 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ILL+  L EDD    +      +  K+   Y +   LLS   D+N+A LE+H G+GGTE+
Sbjct: 64  ILLDF-LAEDDSVQEELEEKLAELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEA 121

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRL
Sbjct: 122 QDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRL 181

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + V
Sbjct: 182 VRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGV 241

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG 
Sbjct: 242 RLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGS 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L
Sbjct: 302 QIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYL 342


>gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
 gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
          Length = 325

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 156/318 (49%), Positives = 221/318 (69%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ + +E + + + I  ++ ++ +L D  +L E+ +++DD     E  +N++ 
Sbjct: 6   FWNDTKRAEEITKESKRIKDKIQRVESVRSKLDDIEVLKEI-MDDDDEESAYEIINNIKE 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+ E++    E LLSGE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ +K E 
Sbjct: 65  IEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKNYKVEM 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASMEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +I+I   D +IDTYRASGAGGQH+N TDSAVRITH+PTGVVVQCQ ERSQ  NK 
Sbjct: 185 LTKEQDIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVVQCQNERSQFSNKD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML+AKL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RTN+E +
Sbjct: 245 TAMGMLKAKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTNVEVS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DGDLD F+ + L
Sbjct: 304 NVTAVMDGDLDLFVNSYL 321


>gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
          Length = 367

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 161/353 (45%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D +     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E    L  ++  ++  +  +LLSGE D  +A + + 
Sbjct: 73  RGRIDDLAVLFELAEEMDDPDTLAEAEAELTSVRKALDEMEVRTLLSGEYDEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ S  +EI ES+ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE Q++EE A +    
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERQRQEERAKMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWRK 363


>gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
 gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
          Length = 323

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 155/318 (48%), Positives = 221/318 (69%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V +A+ + +E + + + I   + + +R+ D  +L EL +EE+D    +E    ++ 
Sbjct: 6   FWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ +  E 
Sbjct: 65  LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ  N+ 
Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN+E +
Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DGD+D+F+ A L
Sbjct: 304 NVNGVMDGDIDNFIIAYL 321


>gi|332140695|ref|YP_004426433.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550717|gb|AEA97435.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 248

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 158/245 (64%), Positives = 191/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  D ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ DG+ AGIK
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I+G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+I+I+ S
Sbjct: 61  SATLRIQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS]
 gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS]
 gi|123070429|sp|Q1BBL5|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166225110|sp|A1UDD2|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           MCS]
 gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           KMS]
          Length = 371

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 163/354 (46%), Positives = 229/354 (64%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D    R+  L  +  DP+LW +   A+ +  E  H  N +  ++E+
Sbjct: 12  LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L E+A EE   D  +   E    L ++++++E  +  +LLSGE D  +A +
Sbjct: 72  RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I++ E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  L  +K+EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LARKKQEERAEL- 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGI 362


>gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03]
          Length = 325

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 154/324 (47%), Positives = 218/324 (67%), Gaps = 2/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +   A+ + ++ +    +I   + +  +  D   L E+A  + D S L +  + 
Sbjct: 3   DPSFWSDRKNAEKISKQARLFKESIEAWETLTSQHKDLCELQEMAAADGDESALSDLENE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +   VE  +F S+L G  DS +A L +H+GAGGTE+ DWA MLLRMY RW E+   K
Sbjct: 63  VDELTKNVESFEFRSMLDGVDDSKNAILVIHSGAGGTEAADWAEMLLRMYNRWTERNGLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           ++ ++I  GEEAGIK  T+ + G  AYG+LK E GVHRLVRISP+DS  RRHTSF+S++V
Sbjct: 123 SKVMDIQPGEEAGIKGVTIEVSGEYAYGYLKAEAGVHRLVRISPFDSGGRRHTSFASVFV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP VDD IE+++ + D +I+ YRA GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQ K
Sbjct: 183 YPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNERSQFK 242

Query: 272 NKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NKA A  +L A++Y+ ++ ++ +++  + E+SK  I +G QIRSYV  PY +VKD RTN 
Sbjct: 243 NKATALKVLTARVYQNIKDEENKKLKEV-ENSKKSIDFGSQIRSYVFHPYNLVKDHRTNY 301

Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354
           E  +   V+DGD+D F++A L ++
Sbjct: 302 ETGNVQAVMDGDIDKFIRAFLTLE 325


>gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS]
 gi|166225109|sp|A3PWV0|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           JLS]
          Length = 371

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 163/354 (46%), Positives = 229/354 (64%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D    R+  L  +  DP+LW +   A+ +  E  H  N +  ++E+
Sbjct: 12  LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L E+A EE   D  +   E    L ++++++E  +  +LLSGE D  +A +
Sbjct: 72  RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I++ E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  L  +K+EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LARKKQEERAAL- 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGI 362


>gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101]
          Length = 364

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 156/327 (47%), Positives = 224/327 (68%), Gaps = 3/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    
Sbjct: 38  LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETA 96

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E    ++ +  E++  + E++LSGE D N+A L +H G GG+++ DW  MLLRMYTRW 
Sbjct: 97  KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLHTGVGGSDANDWTEMLLRMYTRWC 156

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK+ +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TS
Sbjct: 157 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 216

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ 
Sbjct: 217 FASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQN 276

Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ  N+  A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVK
Sbjct: 277 ERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVK 335

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D RTN+E ++ + V+ GD+D+F+ A L
Sbjct: 336 DHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300909208|ref|ZP_07126669.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
 gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300893073|gb|EFK86432.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
          Length = 332

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 157/319 (49%), Positives = 210/319 (65%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ ++ E   L         ++D++ D    LEL   E D  + ++   + 
Sbjct: 4   PDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAVEPDDDLQKDFEASF 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
              +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  F  
Sbjct: 64  TNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRWGEQHAFSV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+ V 
Sbjct: 124 ETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDS+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V   Q ERSQ +N
Sbjct: 184 PELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQLQN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT  E 
Sbjct: 244 RVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTGYET 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   V+DGDLD F+ A L
Sbjct: 304 HNGQAVMDGDLDPFIDAFL 322


>gi|239995055|ref|ZP_04715579.1| Protein chain release factor B, RF-2 [Alteromonas macleodii ATCC
           27126]
          Length = 248

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 158/245 (64%), Positives = 191/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  D ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ +GE AGIK
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL ++G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+IEI+ S
Sbjct: 61  SATLRVQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIEINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|115311855|sp|Q49VV3|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 373

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 159/322 (49%), Positives = 222/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N  +A+ ++ +   L + ++  + ++  L D      L LEEDD ++ Q+   +
Sbjct: 42  DPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLEQS 101

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q  K E++  + + LL G  D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ F 
Sbjct: 102 VQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKGFN 161

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 162 VEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 221

Query: 212 YPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P  +++ IEI+I+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 222 IPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 281

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A   L++KLY+L+++++E E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 282 KNREAAMKTLKSKLYQLKIEEQEQEMAEI-RGEQKEIGWGSQIRSYVFHPYAMVKDHRTN 340

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F++A L
Sbjct: 341 EETGKVDAVMDGDIGPFIEAFL 362


>gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749421|sp|Q6GIN7|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
          Length = 369

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 166/352 (47%), Positives = 229/352 (65%), Gaps = 3/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++ L  + G  D +N    +        +P+ W N  +A+ ++ +   L   ++  K 
Sbjct: 12  KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D     +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+
Sbjct: 72  LQAEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWANML RMY R+ EK+ FK + ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIG 299
           QH+N T+SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++  E+A I 
Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI- 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L
Sbjct: 311 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 362


>gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
 gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
          Length = 325

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 154/322 (47%), Positives = 221/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 TVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH
Sbjct: 181 VLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321


>gi|303249514|ref|ZP_07335721.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251860|ref|ZP_07533761.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256355|ref|ZP_07538138.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302651588|gb|EFL81737.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860552|gb|EFM92564.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865181|gb|EFM97081.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 301

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 155/280 (55%), Positives = 208/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE+Q
Sbjct: 19  LIELAVEAEDEDTFNEAQVEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HRLV
Sbjct: 79  DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINLADLRIDVYRASGAGGQHVNKTESAVR 198

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+     + E SK++IGWG Q
Sbjct: 199 ITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQVMEESKSDIGWGSQ 258

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297


>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
 gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
 gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
 gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
          Length = 377

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 169/359 (47%), Positives = 228/359 (63%), Gaps = 15/359 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  K+ DP LW +   A+ +  E   + + +  +K +
Sbjct: 12  LDGTLTTIEKVLDLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGL 71

Query: 63  QDRLCDNLILLELALEE--DDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L ++A EE  DD    QE         + ++ E+E  +  ++LSGE D  +
Sbjct: 72  RQRLDDLPVLYDMAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A L + + AGG ++ DWA MLLRMYTRWAEK   K E  +I   EEAGIKSAT++I G  
Sbjct: 132 AVLNIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEY 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+S
Sbjct: 192 MYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIDENDVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL  LE +++EE A
Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQA 309

Query: 297 NI----GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    G+ S +   WG Q+R+YVL PYQMVKDLRTN+E   PS VLDGDLD F++A +
Sbjct: 310 EMDALKGDGSNS---WGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGI 365


>gi|312130867|ref|YP_003998207.1| bacterial peptide chain release factor 2 (brf-2) [Leadbetterella
           byssophila DSM 17132]
 gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 160/352 (45%), Positives = 231/352 (65%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G+FD+DN  ++L  L  +   P  W +   A+ +++E Q L N     +E 
Sbjct: 9   LRARVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTEAYEEA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  + D   L E   E +      +T +    +I  E+E K+   +LS E D   A +E+
Sbjct: 69  EASISDLETLFEFYQEGEVEEEEVDTEAKKTVQIIEELELKK---MLSSEEDQFSAIIEI 125

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA+ML RMY  WA+K  +K   ++  DG+ AGIKSA++ I GP AYG+L
Sbjct: 126 NSGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGPLAYGYL 185

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RRHTSF+S++ YP+VDD+IE+E+ ++D    T R+ GAGGQ
Sbjct: 186 KSENGVHRLVRISPFDSNARRHTSFASVYAYPLVDDTIEVEVKDADIEWQTSRSGGAGGQ 245

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++ V++TH PTG+V+ CQ ERSQ  NK  A NML+++LY++EL+KR       E+
Sbjct: 246 NVNKVETKVQLTHKPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEA 305

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SK +I WG QIR+YV  PY++VKD RT  E +    V+DG++DDF+KA L +
Sbjct: 306 SKKKIEWGSQIRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYLML 357


>gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1]
 gi|166225112|sp|A1T6D1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 368

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/351 (46%), Positives = 222/351 (63%), Gaps = 5/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP LW +   A+ +  +  H    +  I+E+
Sbjct: 12  LDATLTTVERVIDVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA EE     + E    L +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RGRLEDLPVLYELAAEEGGSDEVAEADAELTKLREDIEAMEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V PV + +  IEI E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFADVEVLPVTETTDHIEIPEGDVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEM-DAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +
Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGI 359


>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
 gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
          Length = 368

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 163/355 (45%), Positives = 227/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISPYD+  RR TSF+ + + PVV+ +  +EI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPYDNQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|322514782|ref|ZP_08067805.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
 gi|322119244|gb|EFX91374.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
          Length = 301

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/280 (55%), Positives = 207/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE+Q
Sbjct: 19  LIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HRLV
Sbjct: 79  DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 198

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG Q
Sbjct: 199 ITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWGSQ 258

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297


>gi|32033623|ref|ZP_00133934.1| COG1186: Protein chain release factor B [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207810|ref|YP_001053035.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           L20]
 gi|126096602|gb|ABN73430.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 301

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/280 (55%), Positives = 207/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE+Q
Sbjct: 19  LIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HRLV
Sbjct: 79  DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 198

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG Q
Sbjct: 199 ITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWGSQ 258

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297


>gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 334

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 159/322 (49%), Positives = 222/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N  +A+ ++ +   L + ++  + ++  L D      L LEEDD ++ Q+   +
Sbjct: 3   DPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLEQS 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q  K E++  + + LL G  D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ F 
Sbjct: 63  VQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKGFN 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P  +++ IEI+I+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 183 IPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A   L++KLY+L+++++E E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 243 KNREAAMKTLKSKLYQLKIEEQEQEMAEI-RGEQKEIGWGSQIRSYVFHPYAMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F++A L
Sbjct: 302 EETGKVDAVMDGDIGPFIEAFL 323


>gi|270264900|ref|ZP_06193164.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
 gi|270041198|gb|EFA14298.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
          Length = 248

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/245 (63%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD I+I+I+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDDIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL   + +KDLRTN+E  +   VLDGDLD F
Sbjct: 181 FEMQKKNADKQQMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTNVETRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
 gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
          Length = 323

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/318 (48%), Positives = 220/318 (69%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E    ++ 
Sbjct: 6   FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMY RW EK+ +  E 
Sbjct: 65  LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKGYSLET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P 
Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ  N+ 
Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN+E +
Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DGD+D+F+ A L
Sbjct: 304 NVNGVMDGDIDNFIIAYL 321


>gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT
           5716]
          Length = 332

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/290 (54%), Positives = 200/290 (68%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +QD++ +  +  E+   E D  +  E  DN   ++  +   + E LL G  D +DA LE+
Sbjct: 33  LQDQVEELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 92

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L
Sbjct: 93  HPGAGGTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYL 152

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E+GVHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQ
Sbjct: 153 HPEKGVHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQ 212

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E 
Sbjct: 213 HINKTESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEG 272

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L
Sbjct: 273 EQREIGWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYL 322


>gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
 gi|187774165|gb|EDU37967.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
          Length = 325

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 153/318 (48%), Positives = 222/318 (69%), Gaps = 3/318 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + +S    +++ + D + L ++  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIEDIIGLSQMLSEEDD-DMGKEILS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E++  + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 TVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH
Sbjct: 181 VLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L+++L EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSRLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFM 347
            E ++   V++GD++ F+
Sbjct: 300 AETSNVDAVMNGDINIFI 317


>gi|325971169|ref|YP_004247360.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
 gi|324026407|gb|ADY13166.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
          Length = 367

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 165/342 (48%), Positives = 229/342 (66%), Gaps = 8/342 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D  +  +  L TKT +   W +   A+ L  +   L ++    KE+ D L D   L+
Sbjct: 23  LDPDKMLSEIQKLETKTLEAGFWDDRKGAEQLFAQLNGLKDSYYPWKELIDSLGDMAELM 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQ 131
           E+  +E D +  +E   + Q  +L+ +Y Q +  +LL G+ D ND +L +HAGAGG E+ 
Sbjct: 83  EIYADEPD-NPEEEAQIDAQITQLKEQYGQLKLKTLLDGKFDKNDCFLTIHAGAGGNEAS 141

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANML+RMY R+ E+  FK+E L++ + +E GIKSAT+ + GP ++G+LKGE GVHRLV
Sbjct: 142 DWANMLMRMYLRYCERNGFKSEVLDLLE-DEGGIKSATIRVSGPYSFGYLKGEAGVHRLV 200

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS  RRHTSF+S++  PV+DD+IEI++   D R+DTYRA GAGGQHVN TDSAVR
Sbjct: 201 RISPFDSQKRRHTSFTSVYASPVIDDTIEIDLKPEDYRLDTYRAGGAGGQHVNKTDSAVR 260

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG 309
           ITH  +G+VVQCQ ERSQ  NK  A+ ML+++LYE   EL+++E   +  E  K EI WG
Sbjct: 261 ITHYESGIVVQCQNERSQVMNKDVAFKMLKSRLYEYYRELKEKEHQKDAIE--KKEITWG 318

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV QPY MVKD RT++   +   V+DG++ DF++  L
Sbjct: 319 SQIRSYVFQPYTMVKDHRTSVTVGNIQAVMDGEIGDFIEGYL 360


>gi|256828464|ref|YP_003157192.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
          Length = 369

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 159/327 (48%), Positives = 217/327 (66%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL+ +  +   P  W        +++E+  L++ +   + +     + L  +E+A  E 
Sbjct: 32  ERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRVDEWEALLQARDNALEWVEMASTEQ 91

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
              +LQ   + L+ +  ++E  Q  +LLS   D ++A LE+H GAGGTESQDWA MLLRM
Sbjct: 92  TQEMLQALEEALEEMSAKLEAAQMRTLLSDPEDVSEAILEIHPGAGGTESQDWAEMLLRM 151

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+AE+  FK E L++  G+EAGIKS TL I GP AYG LKGE+G HRL+RISP+DS+ 
Sbjct: 152 YRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGPYAYGQLKGEKGTHRLIRISPFDSSG 211

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ VYP     IEIEI + D R+D +R+SG GGQ VNTTDSAVR+THIPTG+V
Sbjct: 212 RRHTSFASVDVYPDAGQDIEIEIRDEDVRVDIFRSSGPGGQSVNTTDSAVRVTHIPTGLV 271

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            QCQ E+SQHKNK  A  +L+A+LYELELQK          +K  I +G QIR+Y LQPY
Sbjct: 272 AQCQNEKSQHKNKEAAMKVLKARLYELELQKIASERQAEYVAKGAIAFGSQIRTYTLQPY 331

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++VKD RT  + ++   VLDG++D F+
Sbjct: 332 RLVKDHRTGTDTSNVDSVLDGNIDAFI 358


>gi|254785320|ref|YP_003072749.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
 gi|242667502|gb|ACS93539.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
          Length = 300

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 159/296 (53%), Positives = 215/296 (72%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I+ +   + D   L++LA+EE+D   L++    +  ++ ++   +F  + SGE D+N
Sbjct: 2   VETIENLDHGVTDCRDLIDLAVEENDEDSLEDVQSEIDSLEAQLAILEFRRMFSGEMDAN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT   E   GE AGIKSAT+  +G 
Sbjct: 62  NAFLDIQSGSGGTEAQDWAEMILRMYLRWGEDKGFKTTLEEASAGEVAGIKSATIRFEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD IEI+I+ +D R+DTYRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEIDDDIEIDINPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQH N+ +A  MLRA++YE E+ KR   
Sbjct: 182 SGAGGQHVNKTDSAVRITHEPTGIVVQCQSERSQHSNRDKAMKMLRARMYEHEILKRNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               E SK++IGWG QIRSYVL   Q +KDLRT I+ ++   VLDG LDDF++A+L
Sbjct: 242 KQALEDSKSDIGWGSQIRSYVLDD-QRIKDLRTGIQTSNCQAVLDGKLDDFIEASL 296


>gi|307243612|ref|ZP_07525755.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492981|gb|EFM64991.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
          Length = 348

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 157/317 (49%), Positives = 225/317 (70%), Gaps = 5/317 (1%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDCSILQETSDN 91
            W++  ++  +++E + ++  ++   ++   + D  ILLEL+ E   E+D  I     D 
Sbjct: 25  FWEDTDKSNKILQENKTIEVRLTQYSQLITSIEDINILLELSEEDSTEEDQEIENSIIDQ 84

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++  +  ++    E L SG+ DSN+A L V++G GG ++QDWA MLLRMY RW+E   +K
Sbjct: 85  VKDARENLDRMTMEMLFSGQYDSNNAILSVNSGTGGLDAQDWAQMLLRMYIRWSESSGYK 144

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            + ++I+   EAGIK+AT+L++G NAYG LK E+GVHRLVRISP+DS+ +RHTSF+SI V
Sbjct: 145 VKLIDINSDPEAGIKTATILVQGQNAYGHLKSEKGVHRLVRISPFDSSGKRHTSFASIDV 204

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +++ I++EI+++D +IDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQH 
Sbjct: 205 VPELNEDIKVEINQTDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQHS 264

Query: 272 NKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK  A  +L AKL +L E + +E I ++ +   ++I WG QIRSYV QPY++VKD RTN 
Sbjct: 265 NKDIAMKLLMAKLIQLKEEENKERIEDL-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNE 323

Query: 331 EKTSPSDVLDGDLDDFM 347
           E  +   V+DG LD+FM
Sbjct: 324 ENANVDAVMDGKLDNFM 340


>gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
 gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
          Length = 300

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 148/296 (50%), Positives = 212/296 (71%), Gaps = 1/296 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ I  +   L DN  L E++ +E D + +      +  ++  +E  +F  + S  AD +
Sbjct: 2   VAAIDHLSSNLADNTELYEMSKDEGDLAGITAIEAEVVELRAMIEKLEFRRMFSNPADPS 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKT   +  +G+ AGIK+AT+ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTTIEDESEGDTAGIKAATIKVEGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI+I+ +D R DT+RA
Sbjct: 122 YAFGHLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEIDINPADVRTDTFRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E 
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFEMRKRMEA 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               E +KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLDQSR-IKDLRTNVETSATQKVLDGDLDAFIEASL 296


>gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1]
          Length = 371

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 226/349 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q + L G  D      RLS +  +   P  W N  +   +++E+  L+  I+ ++ +
Sbjct: 14  LFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D    L LA E++    L+   + + R++  +E  +   LLSG+ D   A LE+H
Sbjct: 74  ETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+QDWA MLLRMY RWA+   +KTE L+  DG+EAGIKS TL I GPNAYG LK
Sbjct: 134 PGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+G+HRL+RISP+D++ RRHTSF+S+ V P V   I+IEI ++D RID +R+SG GGQ 
Sbjct: 194 GERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQS 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+THIPTG+V QCQ E+SQH NK  A  +LR +LYELEL+K EE       +
Sbjct: 254 VNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  IG+G QIR+Y LQPY++VKD RTN E      VLDG LD  ++  L
Sbjct: 314 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 362


>gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 332

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 222/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +A+ ++ +   L + ++   E+++ + D     EL  EE D  +  +   N
Sbjct: 3   EPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLEQN 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ FK
Sbjct: 63  VLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 183 IPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML+AKLY+L+L+++E E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 243 KNREAAMKMLKAKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DG++  F+++ L
Sbjct: 302 EETGKVDAVMDGEIGPFIESYL 323


>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
 gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
          Length = 368

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 163/355 (45%), Positives = 227/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +     +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKADAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD   L E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRIDDLAVLFEMAEEEDDSDTLAEAESELTSVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE++ +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAAM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
 gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
          Length = 340

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/276 (54%), Positives = 203/276 (73%), Gaps = 2/276 (0%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +E+ D S  ++    L+ ++  V   +  +LL GE D N+A + +HAG GG ++QDWA M
Sbjct: 58  IEDGDESFQKDLLKGLEALENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQDWAKM 117

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMYTRWAE + +  + L+I    EAGIKS TLLI+G NAYG+LK E+GVHRLVRISP+
Sbjct: 118 LLRMYTRWAEDKGYGVKTLDILTDTEAGIKSVTLLIEGMNAYGYLKAEKGVHRLVRISPF 177

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           DS+ +RHTSF+S+ V P +DDS++I+I+ +D RIDTYRASG+GGQHVN TDSAVRITHIP
Sbjct: 178 DSSGKRHTSFASVDVMPEIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIP 237

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSY 315
           TG+VVQCQ ERSQH N+  A  ML +KL E+ E +++E+I ++ +    +I WG QIRSY
Sbjct: 238 TGIVVQCQNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDL-QGEYNQIAWGSQIRSY 296

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PY +VKD RTN+E  +   V+DG++D+F+   L
Sbjct: 297 VFNPYNLVKDHRTNVEMGNIQAVMDGEIDEFINGYL 332


>gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
 gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
          Length = 300

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 153/286 (53%), Positives = 209/286 (73%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L DN  L E++ EE D + L        +++ E+E  +F  + S EAD  + ++++ AGA
Sbjct: 12  LADNAELYEMSKEEGDEAGLLTIEAETAKLRPEIEQLEFRRMFSNEADPLNCFVDIQAGA 71

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+ DWA+MLLR Y ++AE++ FKT   E   G+ AGIKSAT+ ++G  AYG L+ E 
Sbjct: 72  GGTEACDWASMLLRQYLKYAERKGFKTTVEEETAGDVAGIKSATIKVEGEYAYGLLRTET 131

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS+  RHTSF+S++VYP +DDSI+I+I+ +D R DTYRASGAGGQH+N 
Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTYRASGAGGQHINK 191

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E +KT+
Sbjct: 192 TDSAVRLTHIPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHEMRKRQEEQQKLEDTKTD 251

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +GWG QIRSYVL   + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 252 VGWGHQIRSYVLDNSR-IKDLRTGVEISATQKVLDGDLDAFIEASL 296


>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
 gi|166225108|sp|A0QU58|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
          Length = 368

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 163/351 (46%), Positives = 223/351 (63%), Gaps = 5/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP+LW +   A+ +  +  H  N +  ++ +
Sbjct: 12  LDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA E      + E    L +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  IEI E+D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIPENDIRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEL-DAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGI 359


>gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
 gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
          Length = 354

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 163/344 (47%), Positives = 215/344 (62%), Gaps = 2/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLC 67
            LGGLFD D   + +     K   P  W N  +A+ L+ E   L +   SF+K +Q    
Sbjct: 2   TLGGLFDLDAIDESIEINENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLK-LQTSYE 60

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D    +EL  EE D  + +E   +L  ++ +    + + LLSG+ DS++A +E+H GAGG
Sbjct: 61  DETTAVELLREEPDPDLQKEVEADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  MLLRMY R+ +   FK E  +   GEEAG+KS +  I G NAYG LK E GV
Sbjct: 121 TEAMDWGQMLLRMYQRYCDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+  RRHTSF+S+ V P VDDSI+I+I   D R+D YR+SGAGGQH+N T 
Sbjct: 181 HRLVRISPFDAAKRRHTSFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+V   Q +RSQ +N+  A N LRAKL+ LE +K+ +     +  + EIG
Sbjct: 241 SAVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIG 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV  PY +VKDLRT  E      V+DG L  F+ + L
Sbjct: 301 WGSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYL 344


>gi|296111417|ref|YP_003621799.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
 gi|295832949|gb|ADG40830.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
          Length = 372

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 157/328 (47%), Positives = 216/328 (65%), Gaps = 2/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCS 83
           F N  TE P  W + ++A+ ++ E   L N       + ++  +  +L+E+  E+ DD  
Sbjct: 36  FENRMTE-PGFWDDNVKAQKVIEENNVLKNRRDSFLNLTNQAEEIDVLIEMLSEDPDDVE 94

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +L E  +N+ +I+ +VE    E LL+   D+N+A LEVH G+GGTES DW   L RMYTR
Sbjct: 95  MLAELEENVAKIQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTR 154

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WA++  F+ + L+ H G+EAGI SAT+ I G NA+G+L+ E+GVHR VRISP+DS  RRH
Sbjct: 155 WAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRFVRISPFDSAGRRH 214

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN   + VR+TH PTG+VV  
Sbjct: 215 TSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSS 274

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
             ER+Q+ N+  A  +L+ KLY+LEL+K+E         K E GWG QIRSYVL PYQMV
Sbjct: 275 TVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGEKLENGWGSQIRSYVLHPYQMV 334

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KD RTN E   P  VLDGDLD F+ A L
Sbjct: 335 KDHRTNYETNQPQQVLDGDLDPFINAYL 362


>gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 325

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 153/322 (47%), Positives = 221/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 TIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH
Sbjct: 181 ILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321


>gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
 gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
          Length = 350

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 161/342 (47%), Positives = 223/342 (65%), Gaps = 1/342 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           GLFD D   + L  L  ++ + + WQ+ + A  +  +   L   I   +E++ ++     
Sbjct: 3   GLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAIEF 62

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE A   +D +I ++        + ++   + + LLSGEAD N  +L ++AGAGGTES 
Sbjct: 63  FLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTESC 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  ML RMY+RWA K ++  E ++  DGE  GIK  T+   G  AYG+ K E+GVHRLV
Sbjct: 123 DWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHRLV 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DSN +RHTSF+S+ V+P +DD I+IEI  +D RIDT+R+SGAGGQHVN T+SAVR
Sbjct: 183 RISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+GVVV CQ ERSQ +N+     ML+AKLY+  LQ+R E  ++    K EI WG Q
Sbjct: 243 ITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWGSQ 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           IR+YV QPY +VKD+RT  E  +   +LDG+ LD+F+KA LA
Sbjct: 303 IRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 344


>gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 327

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 148/317 (46%), Positives = 222/317 (70%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +  +   +++ER  + + +   +++ + L +  +LLEL +EE+D   ++E   +L +
Sbjct: 6   FWDSPDKNTAILKERTSITSLVEGWEKLAEELSEAEVLLELGVEEEDGQTIEEARQHLVK 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+  ++      +L GE D+ +A + ++AGAGGT++QDWA MLLRMY RW E++ F    
Sbjct: 66  IEKGIDKLSLSRMLDGEDDARNAIVAINAGAGGTDAQDWAEMLLRMYLRWVEQKGFSYSI 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAG+K  T  + G  AYG+LK E+GVHRLVRISP++SN +R TSF+S+ VYP 
Sbjct: 126 IDYQPGDEAGVKGVTFTVTGDYAYGYLKTEEGVHRLVRISPFNSNGKRQTSFASVAVYPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D  I ++++E D RID +RASGAGGQHVN T SAVRI HIPTG+VVQCQQE+SQH+N+ 
Sbjct: 186 IDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGIVVQCQQEKSQHRNRD 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  +L+A+LY++E +++++       +K EIG+G QIRSYVL PYQMVKD R N++  +
Sbjct: 246 LAMKVLKARLYQVEQEQQQKQMQDNYEAKEEIGFGNQIRSYVLHPYQMVKDHRINMDVGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
            + VLDGD+D F++A L
Sbjct: 306 VNAVLDGDIDPFIEAVL 322


>gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
 gi|254790921|sp|B9DRN6|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
          Length = 366

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 160/340 (47%), Positives = 219/340 (64%), Gaps = 6/340 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D   + ++ L  K  +P  W + I A+   +E   L +      ++ +   +  + L
Sbjct: 24  LDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFHDMLELSDETELYL 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQ 131
           E+  E  D SI +E  + L  +KLE    Q+E   LLS   D N+A LE+H G+GGTE+Q
Sbjct: 84  EMLAE--DESIKEELEEAL--VKLEQILSQYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 139

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLV
Sbjct: 140 DWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLV 199

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS  RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR
Sbjct: 200 RISPFDSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVR 259

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG Q
Sbjct: 260 LTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQ 319

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYV  PY MVKD RTN E      V+DG++D F+ A L
Sbjct: 320 IRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYL 359


>gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 331

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++    
Sbjct: 4   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 64  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324


>gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
 gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
          Length = 369

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 161/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E  + L  ++  ++  +  +LLSGE    +A + + 
Sbjct: 73  RGRIDDLAVLFELAQEMDDADTLAEAENELTSVRKALDEMEVRTLLSGEYAEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E + RID YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVESSDHVEIDEGELRIDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363


>gi|313903604|ref|ZP_07836994.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466157|gb|EFR61681.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 372

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 161/340 (47%), Positives = 218/340 (64%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD     + +  +     +P  W +   A+  +R+ + L   +   + +  +L D  +L
Sbjct: 2   IFDLAGKRREIERIEQAMTEPGFWDDPERAQHQVRQLKVLKGPVERYEALDRQLEDLQVL 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            ELA EE D S++ E  + + +++  +   + E LL+G  D  DA + +H GAGGTESQD
Sbjct: 62  AELAAEEADVSVIPELEEGIAQVEEGLRQLELELLLTGPYDGYDAIVSLHPGAGGTESQD 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML RMYTRWAE R ++ E L++ +GEEAGIKS T  ++GPNAYG+L+ E GVHRLVR
Sbjct: 122 WAQMLWRMYTRWAEDRGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+S+ V P + DS EIEI   D RID +RA G GGQHVN T+SAVRI
Sbjct: 182 ISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQ 311
            H+PTG+V  CQ ERSQH N+  A  +L+A+L    E Q+ +EIA +      EI WG Q
Sbjct: 242 VHLPTGIVATCQNERSQHSNRETAMKILKARLARYYEEQRLKEIAAL-RGDVGEIAWGNQ 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYV QPY +VKD RT +E  +   V+DG LD F+ A L
Sbjct: 301 IRSYVFQPYTLVKDHRTGVEVGNVQAVMDGQLDVFINAYL 340


>gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 330

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++    
Sbjct: 3   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 63  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 302 EETGKVDAVMDGDIGPFIESYL 323


>gi|294055147|ref|YP_003548805.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
          Length = 386

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 167/356 (46%), Positives = 230/356 (64%), Gaps = 8/356 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++R+   +    D    ++ +  L  +  +P  W +   A+ ++ E   L  A++  + 
Sbjct: 14  EITRRAGHIWRYLDGVKKLEEIEALEAQMAEPTFWDDQQAAQKVIAEANRLKAAVNPCRA 73

Query: 62  IQDRLCDNLILLELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
               + D   +LEL  E     D  +  QE  D +  +  +++  +  S L+G  DS +A
Sbjct: 74  FNAEVDDLQAMLELVDEMGGDPDAAAYEQEVLDAVHALLPKLDALELASFLTGPHDSCNA 133

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L +HAGAGGTES DWA+MLLRMYTRW E+  F  +  +I  GEEAGI SAT+ I+GPNA
Sbjct: 134 LLTIHAGAGGTESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATIRIEGPNA 193

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+ K E+GVHRLVRISP+DSN+RRHTSFSS+ V   ++D I+++I ES+ R D YRASG
Sbjct: 194 YGYAKAERGVHRLVRISPFDSNARRHTSFSSVDVIAEIEDDIDLDIPESEIRTDVYRASG 253

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIA 296
            GGQHVN T+SAVR+THIPT +VV CQ ERSQ KNKA A   L+++LYE  L +KR E+ 
Sbjct: 254 KGGQHVNRTESAVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKMLDEKRSEME 313

Query: 297 NI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              GE  K +I WG QIRSYV QPYQ+V DLRT +++ +   V+DG+LD F+ A L
Sbjct: 314 KFYGE--KGDIAWGNQIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHAWL 367


>gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
          Length = 331

 Score =  312 bits (800), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++    
Sbjct: 4   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 64  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 303 EETGKVDAVMDGDVGPFIESYL 324


>gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 369

 Score =  312 bits (800), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 159/347 (45%), Positives = 219/347 (63%), Gaps = 2/347 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L++ L+ +  + D     +++  L T+   P LW +   A+ +      L +++  ++ 
Sbjct: 12  QLNKSLSSIEAVVDVPAKNKQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   LLELA EE D    QE    +  +  E++  + ++LLSGE D  DA + +
Sbjct: 72  LRSRLDDASTLLELASEESDADTAQEAEKEIATLADEIDTLEVQTLLSGEYDERDALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            + AGG ++ D+A MLLRMY RWAE+  +  E  +I   EEAGIKSAT  +K P AYG L
Sbjct: 132 RSEAGGVDAADFAAMLLRMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  I+I E D R+D + ASG GGQ
Sbjct: 192 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA    +L+AKL E   Q+RE   +  +S
Sbjct: 252 GVNTTDSAVRITHLPTGIVVTCQNERSQIQNKAAGLRVLQAKLLERARQEREAEMDALKS 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
                 WG Q+RSYVL PYQMVKDLRT  E  SP +V DGD+D F++
Sbjct: 312 DGN--SWGSQMRSYVLHPYQMVKDLRTGFESGSPDNVFDGDIDGFIE 356


>gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf.
           saccharolyticum K10]
          Length = 333

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 153/321 (47%), Positives = 220/321 (68%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+D S++ E   
Sbjct: 2   EEPGFWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQG 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RW++K+ F
Sbjct: 62  MMDDFVAKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWSDKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  +R TSF S  
Sbjct: 122 TTSVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + + +++EI+  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ 
Sbjct: 182 VMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK  A  ML+ KLY ++ ++  E  +       +I +G QIRSYV+QPY +VKD RT  
Sbjct: 242 QNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTGA 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + VLDGD+D F+ A L
Sbjct: 302 ESGNVNAVLDGDIDLFISAYL 322


>gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
 gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
          Length = 308

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 154/295 (52%), Positives = 214/295 (72%), Gaps = 3/295 (1%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++  + RL D  ++++LA E  D  +  E       ++ +V   + + LL+G+ D+ +A 
Sbjct: 4   LESFRRRLDDLEVMIDLAEEASDAEMAAEARAEADALEEQVRQFELQVLLNGKYDAYNAI 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L +HAGAGGTE+QDWA MLLRMY RWAE+R FK E L+  DG+EAGIKS T+ ++GP AY
Sbjct: 64  LTIHAGAGGTEAQDWAEMLLRMYVRWAERRGFKVEELDRLDGDEAGIKSVTIAVRGPYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASG 237
           G+L+ E GVHRLVRISP+D++ RRHTSF+++ V P ++D + +IEI   D RIDT+R+SG
Sbjct: 124 GFLRPEMGVHRLVRISPFDASGRRHTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTFRSSG 183

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIA 296
           AGGQHVN T+SAVRITH+PTG+VV CQQERSQ +N+A A  MLR+KL EL+++++ +E+A
Sbjct: 184 AGGQHVNKTESAVRITHLPTGIVVSCQQERSQMQNRAVAMMMLRSKLVELKIEEQNKEMA 243

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            I    + EI WG QIRSYV QPY +VKD R+ +E  +   V+DG+LD F+   L
Sbjct: 244 QI-RGPQMEIAWGSQIRSYVFQPYTLVKDHRSGVEVGNAQAVIDGELDPFIYGYL 297


>gi|257464973|ref|ZP_05629344.1| peptide chain release factor 2 [Actinobacillus minor 202]
 gi|257450633|gb|EEV24676.1| peptide chain release factor 2 [Actinobacillus minor 202]
          Length = 248

 Score =  312 bits (799), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 145/245 (59%), Positives = 189/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+ +VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSCIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
 gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
          Length = 329

 Score =  312 bits (799), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 156/321 (48%), Positives = 223/321 (69%), Gaps = 5/321 (1%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
           + W +  +A+ +++E + + + I   + + D+  +  +++    EE D +  +E  + + 
Sbjct: 5   NFWDDQDKAQEILKEAKMVKDRIEDYQSVIDQTEEVQMMITFT-EEGDQTFEKELKETIN 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++ + V+  +  +LL G+ D     L +HAG GG ++QDWA ML+RMY+RWAE + +  E
Sbjct: 64  QLDVRVKTMKTATLLQGQYDRFSVILSIHAGTGGLDAQDWAKMLMRMYSRWAEAKGYGVE 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L++    EAGIKS T LI+G NAYG+LKGE+GVHRLVRISP+DS+ +RHTSF+S+ V P
Sbjct: 124 ILDLIQDPEAGIKSVTFLIEGINAYGYLKGEKGVHRLVRISPFDSSGKRHTSFASVDVMP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +DDSIE+EI+ +D +IDTYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ +RSQH N+
Sbjct: 184 ELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGLVVQCQNQRSQHSNR 243

Query: 274 AQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
             +  ML+AKL EL E +++E+I ++ GE S  +I WG QIRSYV  PY + KD RTN E
Sbjct: 244 ETSMKMLKAKLIELKEREQKEKIEDLQGEYS--QIAWGSQIRSYVFNPYNLAKDHRTNTE 301

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
             +   V+DGD+D F+   L 
Sbjct: 302 MGNIQSVMDGDIDLFINEYLT 322


>gi|329120961|ref|ZP_08249592.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
 gi|327471123|gb|EGF16577.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
          Length = 328

 Score =  312 bits (799), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 153/323 (47%), Positives = 215/323 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ + ++     +A     ++ +R      LL++A+EEDD  +  +    
Sbjct: 3   DPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLKQE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++ +   +  K+ E LL+ E D+N+A +  HAGAGGTE+QDW  ML+RMY +WAE   + 
Sbjct: 63  IEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEGYG 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L +  G+EAGIKSA  +IKG  AYG LK E+GVHRLVRISP+D+  RRHTSFS++ V
Sbjct: 123 IEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V  CQ ERSQ +
Sbjct: 183 MPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQTQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK Q   +LRAKL+ELE++K E++    +  +  I WG QIRSYV QPY +VKD RT +E
Sbjct: 243 NKEQCLRILRAKLFELEMKKHEQLKRNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTGVE 302

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDL+ F++  L  K
Sbjct: 303 TGNVQAVMDGDLNPFIEGFLKSK 325


>gi|313891989|ref|ZP_07825590.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
 gi|313119632|gb|EFR42823.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
          Length = 342

 Score =  312 bits (799), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 153/323 (47%), Positives = 215/323 (66%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ + ++     +A     ++ +R      LL++A+EEDD  +  +    
Sbjct: 17  DPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLKQE 76

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++ +   +  K+ E LL+ E D+N+A +  HAGAGGTE+QDW  ML+RMY +WAE   + 
Sbjct: 77  IEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEGYG 136

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L +  G+EAGIKSA  +IKG  AYG LK E+GVHRLVRISP+D+  RRHTSFS++ V
Sbjct: 137 IEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAVDV 196

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V  CQ ERSQ +
Sbjct: 197 MPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQTQ 256

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK Q   +LRAKL+ELE++K E++    +  +  I WG QIRSYV QPY +VKD RT +E
Sbjct: 257 NKEQCLRILRAKLFELEMKKHEQLKKNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTGVE 316

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
             +   V+DGDL+ F++  L  K
Sbjct: 317 TGNVQAVMDGDLNPFIEGFLKSK 339


>gi|325264746|ref|ZP_08131475.1| peptide chain release factor 2 [Clostridium sp. D5]
 gi|324030038|gb|EGB91324.1| peptide chain release factor 2 [Clostridium sp. D5]
          Length = 310

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 160/308 (51%), Positives = 220/308 (71%), Gaps = 3/308 (0%)

Query: 50  QHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           QHL      +K+I+    D+    +L+E++ EE D   +    + L R + E E  + ++
Sbjct: 2   QHLKALQESVKQIEQLYADHEDIGLLIEMSEEEPDDETIGGIEEELDRFEEEFEELRIQT 61

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LL+GE DS+ A + +HAGAGGTES DWANML RMY+RWAEK+ F  E L+  DG+ AGIK
Sbjct: 62  LLTGEYDSSSAIVTLHAGAGGTESCDWANMLYRMYSRWAEKKGFSLEVLDYLDGDVAGIK 121

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             T  ++G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S  V P ++D+I+IEI+E 
Sbjct: 122 GVTFEVEGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEDNIDIEINEE 181

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           + RIDTYR+ GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQH NK +A  ML+AKLY 
Sbjct: 182 ELRIDTYRSGGAGGQHVNKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKAKLYL 241

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           L+ Q++ +  +       EIG+G QIRSYV+QPY +VKD RTN+E ++ + V+DG+LD F
Sbjct: 242 LKQQEQADKVSGIRGEVKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVMDGNLDPF 301

Query: 347 MKATLAIK 354
           + A L++K
Sbjct: 302 INAYLSMK 309


>gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SM4/1]
          Length = 333

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 153/321 (47%), Positives = 220/321 (68%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+D S++ E   
Sbjct: 2   EEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQG 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RWA+K+ F
Sbjct: 62  MMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWADKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  +R TSF S  
Sbjct: 122 TTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + + +++E++  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ 
Sbjct: 182 VMPDIKEDLDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK  A  ML+ KLY ++ ++  E  +       +I +G QIRSYV+QPY +VKD RT  
Sbjct: 242 QNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTGA 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + VLDGD+D F+ A L
Sbjct: 302 ESGNVNAVLDGDIDLFISAYL 322


>gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
 gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 330

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++    
Sbjct: 3   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 63  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 302 EETGKVDAVMDGDIGPFIESYL 323


>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
 gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
          Length = 368

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 164/355 (46%), Positives = 226/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
 gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
          Length = 332

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 157/290 (54%), Positives = 200/290 (68%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +QD++ +  +  E+   E D  +  E  +N   ++  +   + E LL G  D +DA LE+
Sbjct: 33  LQDQVEELALTAEMLQAEPDPELKAELDNNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 92

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L
Sbjct: 93  HPGAGGTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYL 152

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E+GVHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQ
Sbjct: 153 HPEKGVHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQ 212

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E 
Sbjct: 213 HINKTESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEG 272

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L
Sbjct: 273 EQREIGWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYL 322


>gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           obeum A2-162]
          Length = 334

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 151/321 (47%), Positives = 216/321 (67%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W +   ++  M+E + + + +     ++ ++ D   ++E+  EE+D  I+ E  +
Sbjct: 2   EAPDFWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYEENDPEIIPEIQE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   +   +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML RMY+RW +++ F
Sbjct: 62  MLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH
Sbjct: 182 VMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NK +A  ML+AKL+ L+ Q+ E   +      T+IGWG QIRSYV+QPY MVKD RT+ 
Sbjct: 242 MNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTSE 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDG++D F+ A L
Sbjct: 302 ETGNVDAVLDGEIDPFINAYL 322


>gi|220932479|ref|YP_002509387.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
 gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
          Length = 331

 Score =  312 bits (799), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 163/322 (50%), Positives = 225/322 (69%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS--ILQETS 89
           DP LW +  +A+ + R+ + + + I  +K++ +   +  +++ELA EED+ +  +  E  
Sbjct: 3   DPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELA-EEDETNRELWSEVE 61

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D +  ++ +++  + +  L+GE D  +A L +H GAGGTESQDWA+MLLRMY RWAE   
Sbjct: 62  DYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAESHG 121

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+   G+EAGIK  TLLI G  +YG+LKGE+GVHRLVRISP+DS+ RRHTSF+S+
Sbjct: 122 YKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFASV 181

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IE++I   D +I+TYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ ERSQ
Sbjct: 182 NVIPEIDDDIEVDIDTGDLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNERSQ 241

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK  A  +L+A+L EL+ + R E          EI WG QIRSYV  PY ++KD RT 
Sbjct: 242 HKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGNQIRSYVFHPYNLIKDHRTG 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E+ +   V+DG +D+F++A L
Sbjct: 302 LEEGNVQKVMDGYIDEFIEAYL 323


>gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
 gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
          Length = 336

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 160/331 (48%), Positives = 214/331 (64%), Gaps = 6/331 (1%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+ L+EDD 
Sbjct: 5   IALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEM-LDEDDS 63

Query: 83  --SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             S L+ET + L +I    E      LLS   D N+A LE+H G+GGTE+QDWA+ML RM
Sbjct: 64  IQSELEETLEKLDKIMTSYE---MTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSFSS+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V
Sbjct: 181 RRHTSFSSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY
Sbjct: 241 VASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RT  E      V+DGD+D F+ A L
Sbjct: 301 TMVKDHRTGYEVAQVDKVMDGDIDGFIDAFL 331


>gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group]
          Length = 468

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 1/335 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   ++R   L+   E P LW + + A  + RE   L   I  + + +  L +++ +L
Sbjct: 122 LKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDML 181

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            LA EEDD  +  ET   L  ++   + K+  +LLSG+ DS   ++EV AGAGGTES DW
Sbjct: 182 RLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 241

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 242 AAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 301

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S   +I +SD RI+ +R+ G GGQH N T+SAVRI
Sbjct: 302 SPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRI 361

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S +EI WG QI
Sbjct: 362 VHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQI 421

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 422 RSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456


>gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11]
 gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 331

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++    
Sbjct: 4   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 64  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324


>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
 gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
          Length = 371

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 161/355 (45%), Positives = 227/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 369

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 153/324 (47%), Positives = 218/324 (67%), Gaps = 2/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +W +  + + L R    L + +  I  +   L D+ + +E+A  +DD  +  E  D 
Sbjct: 42  DPGVWSDPAKGRELSRRYGTLKDDVELIARLDAMLADSNVAIEMA--DDDPDLAAEAEDV 99

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   ++  +  SLL+GE D +DA LE+H+GAGGT++QDWA M+LRMY RWA+ R F+
Sbjct: 100 LTSLAAHLDAIEIRSLLAGEFDESDAVLEIHSGAGGTDAQDWAQMMLRMYERWAQGRGFE 159

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  E+ +G+EAGI SAT +++G  AYG L  E+GVHRLVRISP+D+  RR TSF+S+ V
Sbjct: 160 FEVDEVTEGQEAGILSATAIVRGRYAYGLLVAERGVHRLVRISPFDAQHRRQTSFASLDV 219

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P+ +D+ E+ I E D RIDTYR+SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ +
Sbjct: 220 TPLAEDAGEVVIDEKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTGIVVSCQNERSQLQ 279

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+A+A  +L +KL +   +++    +     + ++GW  Q+RSYVL PYQ+VKD R+  E
Sbjct: 280 NRAKAMQILVSKLEQRRREEQRAQLDALSGPRVDVGWANQVRSYVLAPYQLVKDHRSGYE 339

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   VLDG LD F++A LA ++
Sbjct: 340 DRNVQAVLDGRLDPFIEAFLAWRR 363


>gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 468

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 1/335 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   ++R   L+   E P LW + + A  + RE   L   I  + + +  L +++ +L
Sbjct: 122 LKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDML 181

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            LA EEDD  +  ET   L  ++   + K+  +LLSG+ DS   ++EV AGAGGTES DW
Sbjct: 182 RLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 241

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 242 AAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 301

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S   +I +SD RI+ +R+ G GGQH N T+SAVRI
Sbjct: 302 SPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRI 361

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S +EI WG QI
Sbjct: 362 VHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQI 421

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 422 RSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456


>gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 366

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 159/350 (45%), Positives = 223/350 (63%), Gaps = 5/350 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D D   +R   L     DP LW +   A+ +  +  H  + +  ++ +
Sbjct: 12  LSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQSTLKKVRAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA EE + + L +  D    ++  +E  + +++LSGE D  DA + + 
Sbjct: 72  RQRVDDLPVMYELAEEEGEGTELAD--DERADLRQAIESMEVQTMLSGEYDERDAVVTIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK   K +  +    EEAGIKSAT  +  P  YG L 
Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVSDPYMYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I +SD R+D YR+SG GGQ 
Sbjct: 190 VEQGTHRLVRISPFDNQARRQTSFAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVRITHIPTG+VV CQ E+SQ +N+A A  +L+++L  LE +++EE A +    
Sbjct: 250 VNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRL--LERKRQEEQAEMDALG 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  E  WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +
Sbjct: 308 AGGEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAGI 357


>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
 gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
 gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
 gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
          Length = 367

 Score =  311 bits (798), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 160/352 (45%), Positives = 230/352 (65%), Gaps = 6/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H  + +  ++E
Sbjct: 11  ELDTTLTTVEKVLDVEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA EE   ++    ++  Q ++ ++E  + +++LSGE D  DA + +
Sbjct: 71  LRSRLDDMAVLYELAEEEGPEAVADAHAERAQ-LRTDIEAMEVKTMLSGEYDQRDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DWA ML+RMY RWAEKR +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RAGAGGVDAADWAEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+SG GGQ
Sbjct: 190 SIEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL  LE +++EE A + ++
Sbjct: 250 SVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRQEERAEM-DA 306

Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDG++D F++A +
Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGI 358


>gi|118444993|ref|YP_878978.1| peptide chain release factor 2 [Clostridium novyi NT]
 gi|118135449|gb|ABK62493.1| peptide chain release factor 2 [Clostridium novyi NT]
          Length = 337

 Score =  311 bits (798), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 167/328 (50%), Positives = 233/328 (71%), Gaps = 2/328 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL  L  K ++   W ++ +A+ + +E + + + I      + R+ D  +L+E+++EE+
Sbjct: 3   KRLGELEHKMQESDFWDDINKAQEITQEAKGIKDRIDGYNSTKTRIEDLEVLIEMSIEEE 62

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S ++E  + ++ I+  ++  + E LLSGE D N+A + +H+GAGGT++QDW  MLLRM
Sbjct: 63  DESSIEEILNEVEEIESIIDNFKVEILLSGEYDKNNAIVTLHSGAGGTDAQDWTEMLLRM 122

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTRWAEKR +K + L+I  G+EAGIKSA L I G  AYG+LK E+G+HRLVRISP+++N 
Sbjct: 123 YTRWAEKRGYKVDVLDILPGDEAGIKSANLKITGEFAYGYLKAEKGIHRLVRISPFNANG 182

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +R TSF+S+ V P + ++ +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG+V
Sbjct: 183 KRQTSFASLEVIPELKENQDIEIKADDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIV 242

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VQ Q ERSQ +NK  A +ML++KL EL E   +E+I ++    K EIGWG QIRSYV QP
Sbjct: 243 VQSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQP 301

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           Y MVKD RTN E  +   V+DGD+D F+
Sbjct: 302 YTMVKDHRTNTEMGNVDAVMDGDIDIFI 329


>gi|165975783|ref|YP_001651376.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875884|gb|ABY68932.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 301

 Score =  311 bits (798), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 154/280 (55%), Positives = 206/280 (73%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE+Q
Sbjct: 19  LIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HRLV
Sbjct: 79  DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 198

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+ +VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG Q
Sbjct: 199 ITHIPSSIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWGSQ 258

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297


>gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
 gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis]
          Length = 550

 Score =  311 bits (798), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 154/351 (43%), Positives = 226/351 (64%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +   P LW + + A  + RE   L      +   
Sbjct: 142 IAQSIQVIKKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHGSLMAKRKEVTAF 201

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EEDD  +  E+   L  ++   + K+ E+LL+GE DS   Y+EV 
Sbjct: 202 ERELLEHIDMIKLAREEDDAELESESLKALFHMRRNSKEKELEALLAGEQDSCSCYIEVQ 261

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  A+G+ K
Sbjct: 262 SGAGGTESMDWAKMVMQMYKLWAQRRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 321

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ YR+ G GGQ
Sbjct: 322 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQ 381

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SAVRI HIPTGV   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 382 HANTTESAVRIVHIPTGVTATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQ 441

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+G++D F+ + L+
Sbjct: 442 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLS 492


>gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
          Length = 325

 Score =  311 bits (797), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 153/322 (47%), Positives = 220/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH
Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKERIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321


>gi|114565810|ref|YP_752964.1| peptide chain release factor 2 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336745|gb|ABI67593.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 334

 Score =  311 bits (797), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 154/328 (46%), Positives = 222/328 (67%), Gaps = 4/328 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  KT   + W    EA+ ++++   L   ++  KE+         +LE+A EE+D ++ 
Sbjct: 1   MQKKTLQENFWSERKEAQEILKQISKLQENLNLYKELMGTAQYLNDILEMAEEENDETLW 60

Query: 86  QETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           QE+   L  + L+  +++FE   L SG  D ++A + +HAGAGGTE+QDW  +L RMY+R
Sbjct: 61  QESVREL--LALQKRFREFELLVLFSGPHDYSNAIVSLHAGAGGTEAQDWVEILFRMYSR 118

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE   +  E L+  DG+EAGIKS T L++GP A+G LK E+GVHRL+RISP+DS+ RRH
Sbjct: 119 WAENSSYSIEVLDFLDGDEAGIKSVTFLVRGPYAFGKLKCEEGVHRLIRISPFDSSGRRH 178

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S+ V P +++ IE+ I+  D R+DTYR+SGAGGQH+N TDSAVRITH+P+G+VVQC
Sbjct: 179 TSFASLSVLPEINEDIEVLINVEDLRVDTYRSSGAGGQHINKTDSAVRITHLPSGIVVQC 238

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQH N+  A  +L+AKLY L+ ++ ++     +    EI WG QIR+Y L P+ ++
Sbjct: 239 QNERSQHANRLAAMKILQAKLYALKQKEAQDKLQSIKGDYKEIAWGSQIRTYTLNPFNLI 298

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KD RTN+E  +   VLDG+LDD + A L
Sbjct: 299 KDHRTNMEIGNVQAVLDGELDDLIFACL 326


>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
 gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
          Length = 346

 Score =  311 bits (797), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 162/341 (47%), Positives = 222/341 (65%), Gaps = 1/341 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD D      + +  +      W +   A+   +    L   +  I E++++  +  I  
Sbjct: 4   FDKDELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEIEIYQ 63

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +LA EE + ++ +E   +  +++ +++  + +  L+   D ++A L +H GAGGTESQDW
Sbjct: 64  QLAAEEGE-NLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPGAGGTESQDW 122

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE   ++ E LE   G+EAG+KS TLLI G  A+G+LKGE+GVHRLVRI
Sbjct: 123 AEMLLRMYRRWAESSGYQLETLEFSAGDEAGVKSVTLLISGDYAFGYLKGERGVHRLVRI 182

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS+ RRHTSF+S+ V P +DD +E++I E+D RI+TYRASGAGGQHVN TDSAVRIT
Sbjct: 183 SPFDSSGRRHTSFASVDVLPELDDELEVDIDENDLRIETYRASGAGGQHVNKTDSAVRIT 242

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTGVVVQCQ +RSQHKNK  A  +L +KL EL+ + + E          EI WG QIR
Sbjct: 243 HQPTGVVVQCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLRGEHKEIAWGSQIR 302

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SYVL PY M+KD RT+ E+ +   VLDG LD+F++  L  K
Sbjct: 303 SYVLHPYNMIKDHRTDFEEGNVDKVLDGYLDEFIEEYLKYK 343


>gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
 gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
          Length = 325

 Score =  311 bits (797), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 221/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + +     +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E++  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 TIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P + +  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH
Sbjct: 181 ILPELTEDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321


>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
 gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
          Length = 369

 Score =  311 bits (797), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 162/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E    L  ++  ++  +  +LLSGE    +A + + 
Sbjct: 73  RGRIDDLAVLFELAQEMDDADTLAEAEAELVSVRKALDEMEVRTLLSGEYAEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI ES+ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVEIDESELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363


>gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           132]
          Length = 331

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++    
Sbjct: 4   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 64  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 303 EETGKVDAVMDGDIRPFIESYL 324


>gi|194246500|ref|YP_002004139.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
 gi|193806857|emb|CAP18286.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
          Length = 363

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 157/332 (47%), Positives = 224/332 (67%), Gaps = 4/332 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE- 79
           +RL  LN      + W+N  +AK + +E + L+  I  +++  +   D L LL++  E  
Sbjct: 31  KRLKDLNHLINLSNFWENFEKAKKINQEFKSLNEKIYKMQKFHEEYRDLLSLLKITKENT 90

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           DD   L++T   L  +K  ++  +   LL+   D  +A L +H GAGG ESQDW  MLLR
Sbjct: 91  DDFLFLEQT---LLSLKKNIQDFEINILLNQTYDKKNAILILHPGAGGIESQDWCEMLLR 147

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY ++A+K+ FK   L+   G+ AG+KS +LLIKG  AYG+LK E+GVHRLVRISP+DSN
Sbjct: 148 MYQKYAQKKNFKIVVLDYQVGDVAGLKSVSLLIKGVYAYGYLKSEKGVHRLVRISPFDSN 207

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           S+RHTSF+S  V P ++++IEI+I E + +ID +R+SGAGGQHVNTTDSAVR+TH+PT +
Sbjct: 208 SKRHTSFTSCDVLPEINENIEIKIKEEELKIDVFRSSGAGGQHVNTTDSAVRLTHLPTNI 267

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           V+ CQ ERSQ +NK +A  +L+ KL++ E++K+E    + +  + EI WG QIRSY+  P
Sbjct: 268 VINCQNERSQTRNKERALQILKTKLFQREIKKQEINLKLIQGVQKEISWGNQIRSYIFHP 327

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YQ+VKD RTN+E      V+DGDLD F+ + L
Sbjct: 328 YQLVKDHRTNVESYQIESVIDGDLDLFISSFL 359


>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
          Length = 368

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 163/351 (46%), Positives = 221/351 (62%), Gaps = 5/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     HL   +   + +
Sbjct: 13  LSSTMGSIESVLDLDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  EDD   L E    L  ++  ++  +  +LLSGE D  +A + + 
Sbjct: 73  RARIDDLGVLFELAEAEDDADTLAEAETELAAVRKALDEMEVRTLLSGEYDEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E++ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVEIDETELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAI 360


>gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 368

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/347 (44%), Positives = 225/347 (64%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           ++ +   G  D ++  QRL  +  +   P  W +  +   +++E+  L+ ++S  +++  
Sbjct: 17  QRFSSFWGRLDLESQKQRLEEIEHELSRPGAWDSPEKLTPILKEKSGLEESVSKYEQLHS 76

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +    LE A  +    +LQ   D+L+ +  ++E  + E+LLSG+ D+N A + +H G
Sbjct: 77  LQEEVREWLEFADNDQSGEVLQALEDSLETLSRQLEKVELEALLSGKDDNNPAIVSIHPG 136

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDW  MLLRMYTRWAE + FK + L+   G+EAG+KS TL + G  AYG LK E
Sbjct: 137 AGGTEAQDWVEMLLRMYTRWAESKGFKLDYLDYLPGDEAGVKSVTLQVTGEYAYGLLKSE 196

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +G+HRL+RISP+D++ RRHTSF+S+ VYP V D I IE+ E D R+D ++ASG GGQHVN
Sbjct: 197 RGIHRLIRISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPGGQHVN 256

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SA+RITH+PTG+VVQCQ ERSQ +N+  A  +L+AKLY+ E++K E+      ++K 
Sbjct: 257 KTSSAIRITHMPTGIVVQCQSERSQRRNRDAALKILKAKLYDEEMKKLEDERQEKYAAKD 316

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            I WG QIR+Y L  Y++VKD R N E      VLDG++D  ++  L
Sbjct: 317 SIAWGSQIRTYTLHSYRLVKDHRNNTEIYDVDSVLDGNIDTLIRNYL 363


>gi|331701705|ref|YP_004398664.1| peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129048|gb|AEB73601.1| Peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 373

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 158/350 (45%), Positives = 227/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + ++  G   D D   + ++   +K  +P  W +   A+ L+ +   L         
Sbjct: 14  EMQKAIDGFGRSLDLDALSESIAINESKMAEPGFWDDQEAAQKLIDQTNQLKTKRDNFVG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++L D  + LEL  E+    +  E   + +++K +++  Q   LL+G+ D N+A LE+
Sbjct: 74  LKNKLDDLKVTLELIEEDSHSGMEGEFETDEKQLKTKLDRYQLNLLLNGKYDHNNAILEI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE+QDW +MLLRMYTRWAE   F  + L+   G+ AG+ S +LLI G NAYG+L
Sbjct: 134 HPGAGGTEAQDWGSMLLRMYTRWAEAHGFTVQTLDYQVGDVAGLNSVSLLISGENAYGYL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G+HRLVR+SP+DS  RRHTSF+S+ V P ++D + I+I+  D RID YR+SGAGGQ
Sbjct: 194 RSEKGIHRLVRLSPFDSAGRRHTSFASVDVMPELNDDVSIDINPDDLRIDVYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVRITH+PTG+V   Q +RSQ +N+  A NML++KLYELE +K+ E     E 
Sbjct: 254 HINKTSSAVRITHLPTGIVAASQAQRSQLQNRQTAMNMLKSKLYELEEEKKAEEKAKIEG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + +IGWG QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L
Sbjct: 314 EQKDIGWGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYL 363


>gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
          Length = 387

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 224/352 (63%), Gaps = 7/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + +    R+  L  +  DP LW N   A+ +  E  H+   +  + E
Sbjct: 31  ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 90

Query: 62  IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ RL D  I+ ELA EE DD S++ E    L  ++  VE  + +++LSGE D+ +A + 
Sbjct: 91  LRQRLDDLPIMYELAEEEGDDTSLVDE---ELADLRTGVEALEVKTMLSGEYDAREAVIN 147

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG 
Sbjct: 148 IRSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQ 207

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I +S+ R+D YR+SG GG
Sbjct: 208 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGG 267

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIG 299
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G
Sbjct: 268 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALG 327

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                   WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D  ++A +
Sbjct: 328 AGGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGI 377


>gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale M104/1]
          Length = 330

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 222/323 (68%), Gaps = 4/323 (1%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E   
Sbjct: 2   EAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQQ 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA+ML RMY++WA+K+ F
Sbjct: 62  MLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQH
Sbjct: 182 VMPDIEEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            NK +A  ML+AKLY L+ ++   +E    GE    EIGWG QIRSYVLQPY MVKD RT
Sbjct: 242 MNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVK--EIGWGSQIRSYVLQPYTMVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           ++E  +   VLDG++D F+   L
Sbjct: 300 DVETGNADAVLDGNIDIFINGYL 322


>gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 331

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE +  + ++    
Sbjct: 4   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFEGEMKEDLEQE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 64  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324


>gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
 gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
          Length = 330

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 222/323 (68%), Gaps = 4/323 (1%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E   
Sbjct: 2   EAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQQ 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA+ML RMY++WA+K+ F
Sbjct: 62  MLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQH
Sbjct: 182 VMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            NK +A  ML+AKLY L+ ++   +E    GE    EIGWG QIRSYVLQPY MVKD RT
Sbjct: 242 MNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVK--EIGWGSQIRSYVLQPYTMVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           ++E  +   VLDG++D F+   L
Sbjct: 300 DVETGNADAVLDGNIDIFINGYL 322


>gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
          Length = 367

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 160/351 (45%), Positives = 222/351 (63%), Gaps = 6/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE D S+     D L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I ++D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL  LE +++EE A +   
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQAELDAL 305

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +
Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGI 356


>gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029]
 gi|7388054|sp|P56906|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 160/341 (46%), Positives = 222/341 (65%), Gaps = 1/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD D   + L  L  ++ + + WQ+ + A  +  +   L   I   +E++ ++      
Sbjct: 23  LFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAIEFF 82

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LE A   +D +I ++        + ++   + + LLSGEAD N  +L ++AGAGGTES D
Sbjct: 83  LEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTESCD 142

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML RMY+RWA K ++  E ++  DGE  GIK  T+   G  AYG+ K E+GVHRLVR
Sbjct: 143 WVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHRLVR 202

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DSN +RHTSF+S+ V+P +DD I+IEI  +D RIDT+R+SGAGGQHVN T+SAVRI
Sbjct: 203 ISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESAVRI 262

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+P+GVVV CQ ERSQ +N+     ML+AKLY+  LQ+R E  ++    K EI WG QI
Sbjct: 263 THLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWGSQI 322

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           R+YV QPY +VKD+RT  E  +   +LDG+ LD+F+KA LA
Sbjct: 323 RNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 363


>gi|258544156|ref|ZP_05704390.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
 gi|258520598|gb|EEV89457.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
          Length = 250

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/245 (60%), Positives = 187/245 (76%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+A+L++ AG+GGTE+QDWA+MLLRMY RW E R FKTE +E   G+ AGIK
Sbjct: 1   MFSGELDPNNAFLDIQAGSGGTEAQDWASMLLRMYLRWGEARGFKTELIEESPGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+   G  AYGWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +
Sbjct: 61  SATIEFTGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFAAVFVSPEIDDNIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+D YRASGAGGQHVN T+SAVRITH+PT +VVQ Q  RSQH+N++     LRAKLYE
Sbjct: 121 DLRVDVYRASGAGGQHVNRTESAVRITHLPTNIVVQSQNSRSQHENRSTCMKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LEL KR   A   E SK++IGWG QIRSYVL   + +KDLRT  E ++   VLDG LD F
Sbjct: 181 LELSKRSASAQAIEDSKSDIGWGNQIRSYVLDQSR-IKDLRTGYETSNTQAVLDGGLDPF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 LQASL 244


>gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium
           efficiens YS-314]
          Length = 389

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 224/352 (63%), Gaps = 7/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + +    R+  L  +  DP LW N   A+ +  E  H+   +  + E
Sbjct: 33  ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 92

Query: 62  IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ RL D  I+ ELA EE DD S++ E    L  ++  VE  + +++LSGE D+ +A + 
Sbjct: 93  LRQRLDDLPIMYELAEEEGDDTSLVDE---ELADLRTGVEALEVKTMLSGEYDAREAVIN 149

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG 
Sbjct: 150 IRSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQ 209

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I +S+ R+D YR+SG GG
Sbjct: 210 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGG 269

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIG 299
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G
Sbjct: 270 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALG 329

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                   WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D  ++A +
Sbjct: 330 AGGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGI 379


>gi|256851470|ref|ZP_05556859.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260660891|ref|ZP_05861806.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|282933470|ref|ZP_06338846.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297206285|ref|ZP_06923680.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
 gi|256616532|gb|EEU21720.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260548613|gb|EEX24588.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|281302401|gb|EFA94627.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297149411|gb|EFH29709.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
          Length = 332

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/320 (48%), Positives = 209/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N   A+ L+ E   L        ++     D    LEL  EE D  +  E   +
Sbjct: 3   DPDFWNNQESAQKLISETNKLKEKRDHFNDLAQAFSDEETALELLKEEPDDDLQVEVETD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+++K      +   LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E   F 
Sbjct: 63  LEKLKDSFHQYELNLLLSGKYDANNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHGFT 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+  RRHTSF+S+ V
Sbjct: 123 FEIDDYEPGDEAGVKSVSILIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQFQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK  A N LRAKL++LE +K+ +     +  + +I WG QIRSYV  PY MVKD RTN E
Sbjct: 243 NKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  + V+DG LD+ + + L
Sbjct: 303 TSDVNGVMDGKLDNLIYSFL 322


>gi|326561123|gb|EGE11488.1| peptide chain release factor 2 [Moraxella catarrhalis 7169]
          Length = 248

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 154/245 (62%), Positives = 195/245 (79%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E   FK E LE+ +G  AGIK
Sbjct: 1   MFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+++KG  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +
Sbjct: 61  SATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E     E SK++IGWG QIRSYVL   + +KDLRT +E ++ + VL+GDLD F
Sbjct: 181 LEMQKRMEKQQALEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30]
 gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30]
          Length = 330

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/322 (50%), Positives = 218/322 (67%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + +     
Sbjct: 3   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLEQE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK
Sbjct: 63  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 302 EETGKVDAVMDGDIGPFIESYL 323


>gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
 gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
          Length = 332

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 155/319 (48%), Positives = 210/319 (65%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ ++ E   L         ++D++ D    +EL   E D  + ++   + 
Sbjct: 4   PDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDDLQRDFEVSF 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            + +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  F  
Sbjct: 64  TKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHGFSV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+ V 
Sbjct: 124 ETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDS+E++I  SD R+DT+R+SGAGGQH+N  +SAVRITHIPTG+V   Q ERSQ +N
Sbjct: 184 PELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAERSQLQN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT  E 
Sbjct: 244 RVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTGYET 303

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   V+DGDLD F+ A L
Sbjct: 304 HNGQAVMDGDLDPFIDAFL 322


>gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 367

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/351 (45%), Positives = 222/351 (63%), Gaps = 6/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE D S+     D L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRVRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I ++D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL  LE +++EE A +   
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQAELDAL 305

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +
Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGI 356


>gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13]
 gi|7388051|sp|O84465|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|123606855|sp|Q3KLN9|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           A/HAR-13]
          Length = 369

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 165/345 (47%), Positives = 218/345 (63%), Gaps = 9/345 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +     L  L  +      W +V+ A  +      L   +S   E+++++      
Sbjct: 23  LFDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVS----A 78

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           ++  LE+++ S   E    L++  +  E K  E     LLSGE D N  +L ++AGAGGT
Sbjct: 79  IQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGT 138

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES DW  MLLRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K E GVH
Sbjct: 139 ESCDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVH 198

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDS
Sbjct: 199 RLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDS 258

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI W
Sbjct: 259 AVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISW 318

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           G QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L 
Sbjct: 319 GSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLV 363


>gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
           KM-6054]
          Length = 351

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 2/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++ +  + D D     ++ L  +   P LW +V  A+ +      L   +  ++ ++ R+
Sbjct: 1   MSSIEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  EDD     E    L  ++  VE  +  +LLSGE D+ +A + + A AG
Sbjct: 61  EDLGVLFELAEAEDDADTRTEAEAELVSVQKAVEELEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L+RMY RWAE+  + TE  +    EEAGIKSAT  +K P AYG L  EQG
Sbjct: 121 GVDAADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E D RID YRASG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVDIDEGDLRIDVYRASGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +        
Sbjct: 241 DSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEERAAMDALKDGGS 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  VLDGD+D F++A +  +K
Sbjct: 299 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFIEAGIRWRK 347


>gi|302338432|ref|YP_003803638.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
 gi|301635617|gb|ADK81044.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
          Length = 339

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/332 (48%), Positives = 213/332 (64%), Gaps = 1/332 (0%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            Q +  L  ++  P  W++   A+  + E + L   +   K++     D   L ELA EE
Sbjct: 2   AQEIKVLEAESGSPEFWEDRERAEKRLGELKRLHKRLDPWKDLLSSFEDLETLFELAAEE 61

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
            D S   +    L  +           +  GE D ++A+L +H+GAGGTE+ DW  MLLR
Sbjct: 62  QDESQEHDIKRQLDEVGDTYRGLNLTEMFQGEFDGSNAFLTIHSGAGGTEACDWTAMLLR 121

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTRWAE+R+F  + L++ + E  G+KS TL I G   +G+LK E GVHRLVRISP+DS+
Sbjct: 122 MYTRWAERREFSVQTLDLLEAE-GGVKSVTLQINGDFVFGYLKSEIGVHRLVRISPFDSS 180

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            RRHTSF+S+++ PV+DD IE++I   + RIDTYRA GAGGQHVN TDSAVRITHI TG+
Sbjct: 181 GRRHTSFASVYISPVIDDDIEVDIKPEELRIDTYRAQGAGGQHVNKTDSAVRITHISTGI 240

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VVQCQ ERSQ+KNKA A  +LR++LYE   +++E+        K EI WG QIRSYV QP
Sbjct: 241 VVQCQNERSQYKNKAMALKILRSRLYEHYKKEQEKEQEKHAQEKKEISWGNQIRSYVFQP 300

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y MVKD RT  E  +   V+DG++DDF+ A L
Sbjct: 301 YTMVKDHRTKHEVGNIQAVMDGEIDDFIIAFL 332


>gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
 gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
          Length = 373

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 229/349 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D D    R++ +   +  P  W +  +A+ L++E+  L+ ++    ++
Sbjct: 12  LRERVLALRGHLDLDRKRSRIALIERDSTLPTFWDDNTKAQALLKEKSTLEASVGAYDKV 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +L ELA+E +D +  QE   +L  ++ +V   +   +LSGE D +  +++++
Sbjct: 72  MRGLDDAQVLFELAVEANDEATTQEAEGSLTGLEGDVAKLELARMLSGEQDRSSCFMDIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT+S DWA MLLRMYTR+ E + +K E  +   GEEAG K+ +L I+G  AYG+LK
Sbjct: 132 AGAGGTDSMDWAAMLLRMYTRYCENKGWKVEINDEVPGEEAGFKNVSLRIEGDFAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RR T+F+S+ VYP VDD+I+I+I E D  +   R  GAGGQ 
Sbjct: 192 AEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGGQK 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T S  ++ H+PTG+++ CQ ERSQ  NK  A+ +LR +LYELE++KRE   +  E+ 
Sbjct: 252 VNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRLYELEMKKREAARDAAEAQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I +G QIRSYVL PY+MVKDLRT IE  +   VLDGDL++F+ + L
Sbjct: 312 KKDISFGSQIRSYVLAPYRMVKDLRTGIETGNVDAVLDGDLEEFVTSQL 360


>gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
 gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
          Length = 373

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 158/349 (45%), Positives = 228/349 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  LG   D ++A + L  L  ++     W N+ +A+ + +  + L   +    + 
Sbjct: 14  LAPTLEKLGQALDLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHKR 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D + L E+  E +D S++ E  +    ++ E+E  + ++LL+GE DS++  L +H
Sbjct: 74  KQHWDDLMALCEMGNEFEDESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+QDWA ML RMYTRW E+  F  + ++  DG+EAGIKSAT++I+G NAYG+L+
Sbjct: 134 PGAGGTEAQDWAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SP+D+N+RR TSF+S+ V P + + +E+EI   D  +  YRASGAGGQH
Sbjct: 194 GEHGVHRLVRVSPFDANARRQTSFASVEVMPDLPEDVEVEIRPEDIEMQVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+ H PTG+VV  QQERSQ +NK     MLRAKL EL++Q++ E  +  +  
Sbjct: 254 VNKTSSAVRLIHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +I WG QIRSYV  PYQ+VKD RT  E ++   V+DG+LD F+ A L
Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYL 362


>gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
 gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
          Length = 325

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 220/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH
Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321


>gi|216335|dbj|BAA01123.1| ORF3 [Bacillus subtilis]
          Length = 299

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/296 (52%), Positives = 202/296 (68%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E    
Sbjct: 3   DPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELEKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK
Sbjct: 63  LKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K
Sbjct: 183 MPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           N+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD R
Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298


>gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale DSM 17629]
          Length = 330

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 221/323 (68%), Gaps = 4/323 (1%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E   
Sbjct: 2   EAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQQ 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA ML RMY++WA+K+ F
Sbjct: 62  MLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWADKKGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQH
Sbjct: 182 VMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            NK +A  ML+AKLY L+ ++   +E    GE    EIGWG QIRSYVLQPY MVKD RT
Sbjct: 242 MNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVK--EIGWGSQIRSYVLQPYTMVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           ++E  +   VLDG++D F+   L
Sbjct: 300 DVETGNADAVLDGNIDIFINGYL 322


>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 378

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/346 (46%), Positives = 225/346 (65%), Gaps = 2/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LG   D +N  +R+  L+   E+P  W +   A  L  E  HL N +   + ++   
Sbjct: 18  LEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNELESYQSLKQSY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L+E+ +EE D S++ E  + L     +++    + LLSGE D+ +A L ++AGAG
Sbjct: 78  DDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAMNAILRLNAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DWA ML RMYTRWAE+R F  + L+  +GEEAGIKS T+ I G  AYG+L+ E G
Sbjct: 138 GTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGDYAYGYLRSESG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+++  +R TSF S  V P ++  I+++I E D +++ +R+SGAGGQH+N T
Sbjct: 198 IHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDVDIREEDIKMEVFRSSGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTE 305
            SAVR+ HIPTG VV CQ+ERSQ +N+ +A  ML+AKLY  E +++E ++A I    K  
Sbjct: 258 SSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEAKLAGIRGEVKDN 317

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            GWG QIRSYVLQPY+MVKDLRT  E  +   VLDGD+D F+ A L
Sbjct: 318 -GWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYL 362


>gi|315452804|ref|YP_004073074.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
 gi|315131856|emb|CBY82484.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
          Length = 363

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 161/332 (48%), Positives = 224/332 (67%), Gaps = 3/332 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L+ L  +  DP  WQ+   A    +E+  ++  +S  +  ++ L +   L EL ++ DD 
Sbjct: 33  LTALEREQSDPLFWQDKERAASKNQEKVKIERLLSAYQNAKNTLVEARELFEL-VQNDDP 91

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S L +  ++   ++  V+  +   +L+   D  DA + +  G GG ESQDW +ML RMY 
Sbjct: 92  STLAQLFEDAPHLQACVQSLEVGVMLANAHDGRDAIVSIQPGVGGVESQDWGSMLYRMYL 151

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAE++ FK E L+  +GEEAGIK    +I+G N YG++K E GVHRLVR+SP+++N +R
Sbjct: 152 RWAERKGFKVELLDYQEGEEAGIKGVAFIIRGINVYGYMKNENGVHRLVRMSPFNANGKR 211

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P VDD I+I I + D RIDTYRASGAGGQHVN T+SA+RITH+ TG+VVQ
Sbjct: 212 HTSFASVQVSPEVDDDIDIVIEDKDIRIDTYRASGAGGQHVNKTESAIRITHLATGIVVQ 271

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ +RSQHKNKA A  ML+++LYELEL +++E ++  E  K+EIGWG QIRSYVL PYQ 
Sbjct: 272 CQNDRSQHKNKAMALKMLKSRLYELELHRQKEQSSAEE--KSEIGWGHQIRSYVLAPYQQ 329

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KD R+ I  ++   +LDGDLD  M+A L  K
Sbjct: 330 IKDARSEIAYSNVEAILDGDLDAMMEAVLVSK 361


>gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46]
          Length = 331

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++    
Sbjct: 4   EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ F+
Sbjct: 64  VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFE 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F+++ L
Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324


>gi|124007003|ref|ZP_01691832.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
 gi|123987456|gb|EAY27176.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
          Length = 324

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 157/322 (48%), Positives = 218/322 (67%), Gaps = 2/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           T  P  W +   A+ +++E + +        ++Q+ L D L +L   LE  + S   E +
Sbjct: 2   THQPEFWDDPKAAEKVLKEIKSIKIWTERFDKVQN-LWDELEILNEFLEAGEGS-ETEVT 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +   +++  ++  +F+ +LS E D  +A +E++ GAGGTES DWA ML+RMY  W EK  
Sbjct: 60  NLFSKLEKALDELEFQKMLSDEEDPLNALIEINPGAGGTESMDWAGMLMRMYIMWGEKNN 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   +    GE AG+KS TL I+G  AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 120 YKVREVNYQAGEAAGVKSVTLEIEGDFAYGHLKAEIGVHRLVRISPFDSGGRRHTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           + YPVVDD+IEIEIS +D   DT+RA GAGGQ+VN  ++AVR+ H P+G++V+CQQERSQ
Sbjct: 180 FAYPVVDDTIEIEISPADIEWDTFRAGGAGGQNVNKVETAVRLKHKPSGIIVECQQERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  MLR++LY++E++K+ E     E SK  I +G QIRSYVL PY+MVKDLRT 
Sbjct: 240 LQNKDKAMKMLRSRLYQVEMEKKNEARAKVEGSKKRIDFGSQIRSYVLHPYKMVKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E++   +VLDGDL D+MKA L
Sbjct: 300 HERSDVQNVLDGDLSDYMKAFL 321


>gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 338

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/329 (47%), Positives = 215/329 (65%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  K  +P  W + + A+   +E   L         +Q+   +  + LE+ L+EDD 
Sbjct: 5   IALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETELYLEM-LDEDD- 62

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+ +E   +L R+   +   +   LLS   D ++A LE+H G+GGTE+QDWA+ML RMYT
Sbjct: 63  SVKEELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLFRMYT 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS  RR
Sbjct: 123 RFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RTN E      V+DGD++ F+ A L
Sbjct: 303 VKDHRTNFEVAQVDKVMDGDIEGFIDAYL 331


>gi|290954114|ref|ZP_06558735.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312499|ref|ZP_06803267.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 241

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 145/238 (60%), Positives = 184/238 (77%), Gaps = 1/238 (0%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           +N A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK  TL I+
Sbjct: 1   ANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKIE 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTY
Sbjct: 61  GEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTY 120

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE+ELQKR 
Sbjct: 121 RASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYEMELQKRN 180

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              N  E SK +IGWG QIRSYVL   + +KDLRT +E T+   VLDGDLD F++A+L
Sbjct: 181 AEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKFIEASL 237


>gi|238854884|ref|ZP_04645214.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|260664171|ref|ZP_05865024.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|282931596|ref|ZP_06337089.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|313472385|ref|ZP_07812877.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|238832674|gb|EEQ24981.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|239529755|gb|EEQ68756.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|260562057|gb|EEX28026.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|281304207|gb|EFA96316.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
          Length = 332

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 154/320 (48%), Positives = 207/320 (64%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W N   A+ L+     L        ++     D    LEL  EE D  +  E   +
Sbjct: 3   DPDFWNNQESAQKLISATNKLKEKRDHFNDLAQAFSDEEAALELLKEESDTDLQAEVESD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +K      +   LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E   F 
Sbjct: 63  LESLKDSFHQYELNLLLSGKYDTNNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHGFT 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+  RRHTSF+S+ V
Sbjct: 123 FEIDDYEPGDEAGVKSVSVLIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQFQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK  A N LRAKL++LE +K+ +     +  + +I WG QIRSYV  PY MVKD RTN E
Sbjct: 243 NKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  + V+DG LD+ + + L
Sbjct: 303 TSDVNGVMDGKLDNLIYSFL 322


>gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
 gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
          Length = 373

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 162/354 (45%), Positives = 222/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D      + L  +   P LW +   A+ +  +  +++  I  +  +
Sbjct: 13  LDATLRNIEAVLDLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSYVNGEIEKLGSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLELA  E D  +L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRIDDANVLLELAEAEADSGVLSEVESEITGLAKAIQEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E++ RID YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GES 301
           VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L+A+L  LE +++EE A + G  
Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKMAGLK 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +     WG Q+RSYVL PYQMVKDLRT  E  +PS V DGDLD F++A +  +K
Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIEAGIRWRK 364


>gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC
           824]
 gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
          Length = 329

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 220/322 (68%), Gaps = 10/322 (3%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA----LEEDDCSILQ 86
           ++P  W +V  A+ +  E + L   I     I+ R+ D+ +L+E+      EE+   IL+
Sbjct: 2   QEPDFWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEILK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D    +  EV+  + E +LSGE D N+A L +H G GGT++QDW  MLLRMYTRWAE
Sbjct: 62  EVRD----LHEEVDNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAE 117

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK + +++  G+EAGIKS ++ I G  AYG+LK E+G+HRLVRISP+++N +R TSF
Sbjct: 118 AKGFKVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 177

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +  S +I I   D ++DTYRASGAGGQHVN T+SAVRITH+PTG+VVQCQ E
Sbjct: 178 ASVEVLPQLTQSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSE 237

Query: 267 RSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           RSQH NK  A NML++KL EL E   +E++ ++    K ++GWG QIRSYV QPY MVKD
Sbjct: 238 RSQHSNKETAMNMLKSKLVELKERMHKEKVEDLAGELK-DMGWGNQIRSYVFQPYTMVKD 296

Query: 326 LRTNIEKTSPSDVLDGDLDDFM 347
            RT +E ++   V+DG++D F+
Sbjct: 297 HRTGVETSNVDAVMDGEIDKFI 318


>gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
 gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
          Length = 325

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH
Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKERIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321


>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
 gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
          Length = 371

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 166/353 (47%), Positives = 223/353 (63%), Gaps = 6/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   +R+  L  K  DP LW +   A+ +  +  H  + +  + ++
Sbjct: 12  LETTLQTVEKVIDLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRRVTDL 71

Query: 63  QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKL--EVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  EE D         +  R KL  E+E  + +++LSGE D+ DA +
Sbjct: 72  RQRLDDLPVLYELAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDARDALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAG+KSAT  IK   AYG
Sbjct: 132 NIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTDYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I++ E++ R+D YR+SG G
Sbjct: 192 TLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE +++EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKL--LERKRQEERAQMD 309

Query: 300 ESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               TE   WG Q+RSYVL PYQMVKDLRTN E  +PS VLDGDLD F++A +
Sbjct: 310 ALKTTEGASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAGI 362


>gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
 gi|189040003|sp|A8M3R1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
          Length = 373

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 157/324 (48%), Positives = 215/324 (66%), Gaps = 3/324 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P LW +   A+ +  +  +++  I+ + +++ RL D  +LLELA  E D  +L E +  +
Sbjct: 43  PDLWDDQARAQQVTSQLSYVNGEITKLTDLRSRLDDTQVLLELAEAESDPGVLTEVAAEI 102

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             +   ++  +  +LLSGE DS +A + + AGAGG ++ D+A MLLRMY RWAE+  + T
Sbjct: 103 TGLAKSIDEMEVRTLLSGEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPT 162

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E  E    EEAG+KSAT  +K P AYG L  E G HRLVRISP+D+  RR TSF+ + V 
Sbjct: 163 EVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVL 222

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           PVV+ +  I+I E++ R D YR+SG GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +N
Sbjct: 223 PVVEQTDHIDIPENEMRTDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQN 282

Query: 273 KAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           KA A  +L+A+L  LE +++EE A + G  +     WG Q+RSYVL PYQMVKDLRT  E
Sbjct: 283 KASALRVLQARL--LERKRQEEQAKLQGLKTDAAGSWGDQMRSYVLHPYQMVKDLRTEQE 340

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             SPS V DG+LD F++A +  +K
Sbjct: 341 TGSPSSVFDGELDAFIEAGIRWRK 364


>gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 333

 Score =  309 bits (792), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 159/322 (49%), Positives = 224/322 (69%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP+ W +  +A+ ++ +   L + ++  ++++  L D     EL  EE D  +  +  + 
Sbjct: 4   DPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADLEEE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
               K +++  + + LL+G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+AE++ FK
Sbjct: 64  ANAFKDKLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQRYAEQQGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V
Sbjct: 124 VEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   ++ IEIE++  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 184 IPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++E E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  + + V+DG++  F++A L
Sbjct: 303 EETGNVNAVMDGEIGPFIEAYL 324


>gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str.
           230613]
          Length = 325

 Score =  309 bits (792), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 151/322 (46%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH
Sbjct: 181 ILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKERIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321


>gi|315445399|ref|YP_004078278.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
 gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
          Length = 372

 Score =  309 bits (792), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 162/354 (45%), Positives = 223/354 (62%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L +   DP LW +   A+ +  +  H  N +  ++E+
Sbjct: 12  LDTTLTTVERVVDVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+         E    L +++ ++   +  +LLSGE D  +A +
Sbjct: 72  RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEM- 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 362


>gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281413|gb|EDT46848.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 336

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 155/329 (47%), Positives = 214/329 (65%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+ L+EDD 
Sbjct: 5   IALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEM-LDEDD- 62

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           SI  E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYT
Sbjct: 63  SIQAELEETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYT 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RR
Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSFSS+ V P +DD++E+EI + D ++DT+R+ GAGGQ+VN   + +R+THIPTG+VV 
Sbjct: 183 HTSFSSVEVMPELDDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT  E      V+DGD+D F+ A L
Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIDGFIDAFL 331


>gi|169347339|ref|ZP_02866277.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
 gi|169293956|gb|EDS76089.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
          Length = 367

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/259 (57%), Positives = 191/259 (73%), Gaps = 2/259 (0%)

Query: 95  IKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           +K + +  +FE   LLSGE D+ +A +E+H GAGGTESQDWA ML RMY R+A ++ +K 
Sbjct: 103 LKFQEDLDKFEKMMLLSGEHDNLNAIVEIHPGAGGTESQDWAEMLFRMYQRYASRKDWKV 162

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+  DG+ AGIKS T+LIKG + YG LK E+GVHRLVR+SP+DS  RRHTSF+S+ V 
Sbjct: 163 EVLDYLDGDVAGIKSVTMLIKGEDVYGHLKAEKGVHRLVRLSPFDSAKRRHTSFASVDVM 222

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  ++ IEI+I   D +IDTYRASGAGGQH+N TDSAVRITHIPT +VV CQ +RSQ KN
Sbjct: 223 PEFNNEIEIDIKNEDLKIDTYRASGAGGQHINKTDSAVRITHIPTNIVVTCQSQRSQIKN 282

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           + QA  ML++KLY+L L+K+       +  + EI WG QIRSYVL PY +VKD R+N E 
Sbjct: 283 REQAMIMLKSKLYQLMLEKQASELKELKGEQKEIAWGSQIRSYVLHPYSLVKDNRSNYES 342

Query: 333 TSPSDVLDGDLDDFMKATL 351
           ++P  VLDGDLD F+ A L
Sbjct: 343 SNPKAVLDGDLDGFIYAYL 361


>gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4]
 gi|123517990|sp|Q2MGI2|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus pneumoniae TIGR4]
          Length = 364

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 158/346 (45%), Positives = 216/346 (62%), Gaps = 2/346 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L    G  D +   + ++ L  K  +P  W + I A+   +E   L N  +   ++++ 
Sbjct: 16  KLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEEL 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             +  ILL+   E  D S+  E    L  +   +   +   LLS   D N+A LE+H G+
Sbjct: 76  QDEVEILLDFLAE--DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGS 133

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E 
Sbjct: 134 GGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEM 193

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN 
Sbjct: 194 GVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNK 253

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
             + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY++E  K+    +  +  K E
Sbjct: 254 VSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKE 313

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           I WG QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L
Sbjct: 314 ITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYL 359


>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 370

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 160/353 (45%), Positives = 223/353 (63%), Gaps = 6/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H    +  + E+
Sbjct: 12  LDATLTTVEKVMDLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQAELRRVTEL 71

Query: 63  QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKL--EVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  EE D  +      + +R  L  ++E  + +++L+GE D  +A +
Sbjct: 72  RSRLDDLPVLYELAEAEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAGEYDPREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+     E  +    EEAG+KSAT  +K P  YG
Sbjct: 132 NIRSGAGGVDAADWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATFAVKAPYMYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL  LE +++EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRQEERAQMD 309

Query: 300 E-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              S T   WG Q+RSYVL PYQMVKDLRTN+E  +PS VLDG+LD F++A +
Sbjct: 310 ALKSDTGASWGNQMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQFIEAGI 362


>gi|332994017|gb|AEF04072.1| protein chain release factor B, RF-2 [Alteromonas sp. SN2]
          Length = 248

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 157/245 (64%), Positives = 188/245 (76%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D+ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ DG+ AGIK
Sbjct: 1   MFSQPNDANDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP VDD I+I+I  S
Sbjct: 61  SATLRIAGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEVDDDIDIDIDPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F
Sbjct: 181 YELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGGLDKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
 gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
          Length = 381

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   ++ + G  D D+  ++++     T  P  W +  +A  +M + + L   I   ++
Sbjct: 15  QLKADVSAVWGRLDVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKGRIEPWQD 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D   L EL LEE+D SI  E  +  ++ K + E++   +LLS E D ND +L V
Sbjct: 75  LVQRVDDLEALYELGLEENDKSIESELKEQYEKAKADYEHQSILNLLSDEVDKNDCFLSV 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+ DW  ML RMY RWAE+  +K E L   + E  G+KS  + I GP  YG+ 
Sbjct: 135 HAGAGGTEACDWTFMLSRMYQRWAERHGYKVEVLSQEEAE-GGLKSINMKISGPYVYGYT 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N+RRHTSF+S++V+PV+DDSIE+ I   D R+DTYR+ G GGQ
Sbjct: 194 KGEAGVHRLVRISPFDANARRHTSFASVYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR THIPTG+VV C  ERSQ  N+A A ++L+++LYE   ++RE+  +    
Sbjct: 254 HVNKTESAVRFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYKEEREKENSKFAG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I +G QIRSYV QPY MVKD RT     +   V+DGD+D F+   L+ K
Sbjct: 314 EKKDISFGSQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDEFLSAK 366


>gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51]
 gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 315

 Score =  309 bits (791), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 156/309 (50%), Positives = 215/309 (69%), Gaps = 3/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +M+E  +    +     +Q +L D L L ++A+EE D S+  E  + +  ++  ++  + 
Sbjct: 1   MMQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEGILALQQRLDGLEL 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E LLSG  D N+A + +HAGAGGTE+QDW +ML RMY R+ E+  +K E ++   G+EAG
Sbjct: 61  EILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEI 223
           IKSATL   G NA+G+LK E+GVHRLVRISP+D++ RRHTSF+S+ V P V++D+ EI+I
Sbjct: 121 IKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQI 180

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
              D ++DTYRASGAGGQHVN T SAVRITH+PTG+VVQ Q ERSQ +N+A    +L+AK
Sbjct: 181 PPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAK 240

Query: 284 LYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           L EL+ +++E EI+ I    + EI WG QIRSYV  PY MVKD RTN E  +   V+DG+
Sbjct: 241 LLELKRKQQEDEISEI-RGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGE 299

Query: 343 LDDFMKATL 351
           +D F+ A L
Sbjct: 300 IDQFIAAYL 308


>gi|282856730|ref|ZP_06265994.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
 gi|282585426|gb|EFB90730.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
          Length = 252

 Score =  309 bits (791), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 151/245 (61%), Positives = 183/245 (74%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLSG  D   A L VHAG+GG +SQDWA ML RMY RW E+R+FKT+ L+    EEAGIK
Sbjct: 4   LLSGPYDHCSAILSVHAGSGGLDSQDWAEMLYRMYLRWCEERRFKTKLLDYQHDEEAGIK 63

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATLLI+G  AYG+L+ E GVHRLVRISP+D+N RRHTSF+S+ V P + D +++EI+  
Sbjct: 64  SATLLIQGETAYGYLRSEIGVHRLVRISPFDTNKRRHTSFASVDVSPQLPDDVDVEIAPE 123

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH NKA A ++L++KLY+
Sbjct: 124 DLRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVSCQNERSQHMNKATAMSVLKSKLYQ 183

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL++R+   N     K E  WG QIRSYVLQPY +VKD RT  E  +   VLDG LD F
Sbjct: 184 RELEQRQAEMNALAGEKKESTWGSQIRSYVLQPYTLVKDHRTGEETGNVGGVLDGGLDPF 243

Query: 347 MKATL 351
           + A L
Sbjct: 244 ILAYL 248


>gi|269792424|ref|YP_003317328.1| peptide chain release factor 2 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100059|gb|ACZ19046.1| bacterial peptide chain release factor 2 (bRF- 2)
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 374

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 161/314 (51%), Positives = 212/314 (67%), Gaps = 4/314 (1%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           A+ L + +Q  ++  +  +E++D   + L  L  A E++D S  +E  D    ++  +E 
Sbjct: 55  ARELSQLQQRRESFSALEREMED--LETLAELLQAGEDEDLS--REFYDRAAEMERRLER 110

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            Q  +LL  E D +DA + +HAGAGG +SQDWA ML RMY RWAE+  FK   L+    +
Sbjct: 111 TQVLTLLDEEYDRSDAIVGIHAGAGGLDSQDWAEMLYRMYVRWAERNGFKVRVLDELPDQ 170

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           EAGIKS T  + G  AYG+LKGE+GVHRLVRISP+D+  RRHTSF+S+ V PV+ D +EI
Sbjct: 171 EAGIKSVTFQVSGEYAYGYLKGERGVHRLVRISPFDAAKRRHTSFASVEVMPVLPDDVEI 230

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI   D ++DT+RASGAGGQ+VN TDSAVRITHIPTG+VV CQ ERSQH N+A A  ML+
Sbjct: 231 EIRPEDIKMDTFRASGAGGQYVNMTDSAVRITHIPTGIVVSCQVERSQHMNRATALQMLK 290

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +KL+E +L++R+E     +  K  I WG QIRSY LQP+Q+VKD R+  E  +   VLDG
Sbjct: 291 SKLFERQLRERQEQLEAIQGEKRAISWGSQIRSYTLQPFQLVKDHRSGCEIGNVQAVLDG 350

Query: 342 DLDDFMKATLAIKK 355
           DLDD M A L   K
Sbjct: 351 DLDDLMMAYLKFYK 364


>gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
 gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
          Length = 365

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 160/350 (45%), Positives = 229/350 (65%), Gaps = 5/350 (1%)

Query: 7   LNCLGGL---FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           L+ LG L    D D  +  +     KT  P  W N   A+  M+  Q     +    + +
Sbjct: 11  LDRLGALRRYLDIDAKLIEIENEEEKTLAPDFWNNAQVAQAQMKVLQSKKKWVKDFDDAK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D  +LLE  L+E D +  +E  ++  + K  +E  +F+++LS E D   A L++ A
Sbjct: 71  ILIADLEVLLEF-LKEGDVTA-EEVENHYNKAKTHIEDLEFKNMLSDEGDELTAILQITA 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA ML+RMY  WAEK  +K + L   +G+ AGIK+ TL I+G  A+GWLKG
Sbjct: 129 GAGGTESCDWAAMLMRMYLMWAEKNGYKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ +D  I T R+SGAGGQ+V
Sbjct: 189 ENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINPADIEITTARSSGAGGQNV 248

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++ V++TH PTG+ + C   RSQH N+A A  ML+++LYE+EL+K++E  +  E+ K
Sbjct: 249 NKVETKVQLTHKPTGIQISCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAGK 308

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +I WG QIR+YV+ PY++VKD+RT  E  +   V+DG +D F+KA L +
Sbjct: 309 MKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDAVMDGQIDPFLKAYLMM 358


>gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 336

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 155/329 (47%), Positives = 215/329 (65%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+ L+EDD 
Sbjct: 5   IALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEM-LDEDD- 62

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+  E  ++L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYT
Sbjct: 63  SVQAELEESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYT 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RR
Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSFSS+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT  E      V+DGD+D F+ A L
Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIDGFIDAYL 331


>gi|317121051|ref|YP_004101054.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
 gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
          Length = 416

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 158/321 (49%), Positives = 210/321 (65%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W     A+  +R+ + L   +   + ++ +L D  +L ELA EE D S++ E  + 
Sbjct: 41  DPSFWDEPDRAQQQVRQLKVLKGPVEHYEALERQLDDLQVLAELAAEEADVSVIPELEEG 100

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           + + +  +   + + LL+G  D  DA + +H GAGGTESQDWA ML RMYTRWAE   ++
Sbjct: 101 IAKAEEGLRQLELDLLLNGPYDGYDAIVSLHPGAGGTESQDWAQMLWRMYTRWAEDHGYQ 160

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L++ +GEEAGIKS T  ++GPNAYG+L+ E GVHRLVRISP+D+  RRHTSF+S+ V
Sbjct: 161 VEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVRISPFDAAGRRHTSFASVDV 220

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + DS EIEI   D RID +RA G GGQHVN T+SAVRI H+PTG+V  CQ ERSQH 
Sbjct: 221 LPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRIVHLPTGIVATCQNERSQHA 280

Query: 272 NKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+  A  +L+A+L    E Q+ +EIA +      EI WG QIRSYV QPY +VKD RT +
Sbjct: 281 NRETAMKILKARLARYYEEQRLKEIAAL-RGDVGEIAWGNQIRSYVFQPYTLVKDHRTGV 339

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DG LD F+ A L
Sbjct: 340 EVGNVQAVMDGHLDPFINAYL 360


>gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis C231]
 gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis I19]
          Length = 366

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 161/351 (45%), Positives = 222/351 (63%), Gaps = 5/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW N   A+ +  E   +   +  +  
Sbjct: 11  ELDATLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D + L +  + L  +  E+E  + +++LSGE D+ +A + +
Sbjct: 71  LRQRIDDMPVMYELAEEEGDDTELAD--EELAELTSEIESLEVKTMLSGEYDAREAVINI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 129 RSGAGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ I V PVV+ +  I+I +S+ R+D YR+SG GGQ
Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G 
Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDALGA 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+RSYVL PYQMVKDLRTN E   P  VLDGDLD F++A +
Sbjct: 309 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGI 357


>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
 gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
          Length = 367

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 161/353 (45%), Positives = 222/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D D    +++ L  +   P LW +  +A+ +  +  H    +  +  +
Sbjct: 12  LSATLASIEAVMDLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQGELRRVTAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D     E      +++ E+   +  +LLSGE D+ DA + V 
Sbjct: 72  RGRLDDLGVLYELAEDEGDEGSAAEADTERAKLREEISSLEVRTLLSGEYDARDALVTVR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A MLLRMY+RWAE+  +  +  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 AEAGGVDAADFAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRVTAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  +EI E + R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQTDHVEIDEKELRVDVYRSSGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL  LE Q++EE A +    
Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKL--LERQRQEEQAKMDALK 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +PS VLDG++DDF++A +  +K
Sbjct: 310 DSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWRK 362


>gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271]
 gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga
           ochracea DSM 7271]
          Length = 367

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 154/351 (43%), Positives = 233/351 (66%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L   FD D     +S    KT  P  W N  EA+ +MRE +     +   +E 
Sbjct: 10  LVNRLGALRRYFDVDAKRIEISNEEEKTFAPDFWDNAKEAEKVMRELRTKKKWVEDYEEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   D  +LL+   E +  +  ++      +    +E  +F ++LS E D+  A L++ 
Sbjct: 70  ENLTSDIEVLLDFFKEGEATA--EDVDHQYTQALHAIEALEFRNMLSDEGDTMSAVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AG+K+ T+ I+G  A+G+LK
Sbjct: 128 AGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGVKTVTIEIEGEYAFGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D   +T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADITFETMRSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LYE+EL+KR+   +  E+ 
Sbjct: 248 VNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RTN E T    V++G+LD+F+KA L +
Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLKAYLML 358


>gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1]
 gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax
           citrulli AAC00-1]
          Length = 300

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 152/286 (53%), Positives = 205/286 (71%), Gaps = 1/286 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L DN  L E++ EE D + L        +++  +E  +F  + S EAD  + ++++ AGA
Sbjct: 12  LADNAELYEMSKEEGDEAGLLTIEAEAGKLRPLIEELEFRRMFSNEADPLNCFVDIQAGA 71

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+ DWA MLLR Y ++AE++ FK    +   G+ AGIKSAT+ I+G  AYG L+ E 
Sbjct: 72  GGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLRTET 131

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH+N 
Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQHINK 191

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E     E +KT+
Sbjct: 192 TDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDTKTD 251

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F++A+L
Sbjct: 252 VGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 296


>gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
 gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
          Length = 365

 Score =  309 bits (791), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 158/326 (48%), Positives = 221/326 (67%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  KT     W +   A+  ++    L         ++ +  D L L+EL  E DD  + 
Sbjct: 35  LEQKTFAADFWNDQELAQKTLQRLNDLKEKFDNFTLLEKKYDDLLTLIELCTETDDEELR 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + ++  K ++E  + ++LLSG+ D  +A L +HAGAGGTE+QDW +MLLRMYTRWA
Sbjct: 95  TELLNEMKDFKKQLEKMKLQTLLSGKYDGRNAILTLHAGAGGTEAQDWVSMLLRMYTRWA 154

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +K   L++  G+EAGIKSA +L++GPNAYG+LK E+GVHRLVRISP+D+  RRHTS
Sbjct: 155 EDKGYKVSILDMLPGDEAGIKSAAVLVEGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTS 214

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD IEI+I   D +IDT+R+ GAGGQHVN T+SAVRITHIPTG VV CQ 
Sbjct: 215 FASVDVMPEIDDDIEIDIKPEDLKIDTFRSGGAGGQHVNKTESAVRITHIPTGTVVSCQN 274

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  +LRAKL+++  +++++  +    S+ EI WG QIRSY+  PY +VKD
Sbjct: 275 ERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEIAWGSQIRSYIFHPYSLVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT++E  +   V+DG+LD+F+ A L
Sbjct: 335 HRTDVEVGNVQAVMDGELDEFINAYL 360


>gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R]
 gi|24638152|sp|Q8NS78|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166223627|sp|A4QCD3|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC
           13032]
 gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 368

 Score =  308 bits (790), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 161/352 (45%), Positives = 225/352 (63%), Gaps = 7/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + +      R+  L  +  DP LW +   A+ +  E  H+   +  I +
Sbjct: 11  ELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITD 70

Query: 62  IQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ R+ D  I++ELA EED D SI +E   +L+ +   ++  + +++LSGE D+ +A + 
Sbjct: 71  LRQRIEDLPIMVELAEEEDGDTSIAEEELADLRSL---IDALEVKTMLSGEYDAREAVIN 127

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG 
Sbjct: 128 IRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQ 187

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I ++D R+D YR+SG GG
Sbjct: 188 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGG 247

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIG 299
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G
Sbjct: 248 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALG 307

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                   WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D  ++A +
Sbjct: 308 AGGNA--SWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGI 357


>gi|116494437|ref|YP_806171.1| protein chain release factor B [Lactobacillus casei ATCC 334]
 gi|227535599|ref|ZP_03965648.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631186|ref|ZP_04674217.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301065947|ref|YP_003787970.1| protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|116104587|gb|ABJ69729.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           casei ATCC 334]
 gi|227186729|gb|EEI66796.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239525651|gb|EEQ64652.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438354|gb|ADK18120.1| Protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|327381888|gb|AEA53364.1| Peptide chain release factor 2 [Lactobacillus casei LC2W]
 gi|327385049|gb|AEA56523.1| Peptide chain release factor 2 [Lactobacillus casei BD-II]
          Length = 368

 Score =  308 bits (790), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 154/342 (45%), Positives = 220/342 (64%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG FD D   +R++    +  +P  W +   A+ ++     L         +++ L D 
Sbjct: 17  LGGHFDLDALNERITENEGRMAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDL 76

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               EL  +E D  + QE    ++ ++ +++  + + LL+G  D N+A LE+H GAGGTE
Sbjct: 77  EAGFELLQDEPDKDLQQEEEAKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTE 136

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDW +ML+RMY RWA++  FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHR
Sbjct: 137 SQDWGSMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHR 196

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF+S+ V P +D+SIE+++   D +++ +R+SGAGGQH+N T SA
Sbjct: 197 LVRISPFDSAGRRHTSFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSA 256

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+ H+PTG+V   Q +RSQ +NKA A  ML+AKLY+ E + +   A   +  + ++ +G
Sbjct: 257 VRLIHLPTGIVTSSQAQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFG 316

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV  PY MVKD RTN E  + + V+DGDL+ F+ A L
Sbjct: 317 SQIRSYVFHPYTMVKDHRTNYETGNGNAVMDGDLNPFINAYL 358


>gi|167755601|ref|ZP_02427728.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|237734350|ref|ZP_04564831.1| peptide chain release factor 2 [Mollicutes bacterium D7]
 gi|167704540|gb|EDS19119.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|229382580|gb|EEO32671.1| peptide chain release factor 2 [Coprobacillus sp. D7]
          Length = 365

 Score =  308 bits (790), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 159/298 (53%), Positives = 201/298 (67%), Gaps = 11/298 (3%)

Query: 65  RLCDNLILLELALEEDDCS--ILQETSDNLQRIKLEVEYKQFES---------LLSGEAD 113
           +  D   LLE  L   D +  +++ T D   +  LE +Y  FE          LLSGE D
Sbjct: 64  KTTDQYDLLETTLTSLDETYELVKNTEDQEFKEILESDYTVFEKELSKFETMMLLSGEHD 123

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             +A +E+H GAGGTESQDWA ML RMY R+A  + +K E L+  DG+ AGIKS T+LIK
Sbjct: 124 DLNAIVEIHPGAGGTESQDWAEMLFRMYQRYAANKGWKVEVLDYLDGDVAGIKSVTMLIK 183

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G N YG LK E+GVHRLVR+SP+DS  RRHTSF+S+ V P  ++ IEIEI  +D +IDTY
Sbjct: 184 GDNVYGHLKAEKGVHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIEIQSTDLKIDTY 243

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQH+N TDSAVRITH+PT +VV CQ +RSQ +N+ QA  ML++KLY+L L+K+ 
Sbjct: 244 RASGAGGQHINKTDSAVRITHLPTNIVVTCQSQRSQIQNREQAMVMLKSKLYQLMLEKQA 303

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                 +  + EI WG QIRSYVL PY +VKD R+  E  +P  VLDGDLD F+ A L
Sbjct: 304 SELKELKGEQKEIAWGSQIRSYVLHPYSLVKDNRSGYESNNPKAVLDGDLDGFIYAYL 361


>gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 373

 Score =  308 bits (790), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 163/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 15  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA E+ + +       +   + ++ ++E  +  +LLSGE D  +A + 
Sbjct: 75  RARLDDLPVLYELAAEDGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 134

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 135 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 194

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 195 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 254

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + +
Sbjct: 255 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 311

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 312 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 364


>gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189040006|sp|A8AY61|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 364

 Score =  308 bits (790), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 159/346 (45%), Positives = 217/346 (62%), Gaps = 2/346 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L    G  D +   + ++ L  K  +P  W + I A+   +E   L        ++ D 
Sbjct: 16  KLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDL 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             ++ ILL+  L EDD    +      +  K+   Y +   LLS   D+N+A LE+H G+
Sbjct: 76  FDESEILLDF-LAEDDSVQEELEEKLAELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGS 133

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GP+AYG LK E 
Sbjct: 134 GGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEM 193

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN 
Sbjct: 194 GVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNK 253

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
             + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K E
Sbjct: 254 VSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKE 313

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           I WG QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L
Sbjct: 314 ISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYL 359


>gi|225165725|ref|ZP_03727521.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
 gi|224800034|gb|EEG18467.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
          Length = 341

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 147/254 (57%), Positives = 186/254 (73%)

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           E++  +  + L+G+ D N+A   + AGAGGTES DWA+ML RMYTRWAE+R F  E  ++
Sbjct: 72  ELDDLEINAFLTGQFDRNNAIFSIQAGAGGTESNDWADMLFRMYTRWAERRGFTVEVQDV 131

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
             G++AGI  ATLLIKG NAYG+ K E+GVHRLVRISP+DSN RRHTSF ++ V   ++D
Sbjct: 132 QPGDQAGISKATLLIKGENAYGYCKAERGVHRLVRISPFDSNQRRHTSFCAVDVIAEIND 191

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            I+IEI E + R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ KNKA A 
Sbjct: 192 EIKIEIPEDEIRVDVYRSSGKGGQGVNTTDSAVRLTHIPTGLVVVCQNERSQIKNKASAM 251

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++L+A+LYE +  ++    +     K EIGWG QIRSYVLQPYQMVKDLRT +  +    
Sbjct: 252 SILKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDLRTGVNTSDTQG 311

Query: 338 VLDGDLDDFMKATL 351
           VLDGD+D F+   L
Sbjct: 312 VLDGDIDRFINGWL 325


>gi|301100688|ref|XP_002899433.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
 gi|262103741|gb|EEY61793.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
          Length = 378

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 157/350 (44%), Positives = 223/350 (63%), Gaps = 3/350 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R++  +  +    +  Q L+ L  +  DP LW +   A  +++    L++  + + E+  
Sbjct: 16  REIAVIHDVVTTTHNAQELAELRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHR 75

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  D   L  LA EE+D S+L +    +  ++ E +  + E LLS E D++  +LE+ AG
Sbjct: 76  QFLDTKELYVLAKEEEDESMLGDCVSAMTVVRAEAQQLRLEFLLSHETDAHSCFLEIQAG 135

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGT+S DW  ML RMY RW+E R F+ + ++   G+EAG +S  L + G  AYGW K E
Sbjct: 136 AGGTDSCDWTAMLARMYARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNE 195

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQ 241
            GVHRLVRISP+DS  RRHTSF+ + VYP+  +   S EIE+S  D RIDT+R+SG GGQ
Sbjct: 196 AGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAEGRSSAEIEVSTKDLRIDTFRSSGPGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN+TDSA+RITH+ TG+VVQ Q +RSQH+NKA+A  MLRAKLY+ +L++  +       
Sbjct: 256 HVNSTDSAIRITHLRTGIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQ 315

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG QIRSYVL PYQ+VKD RTN  + + + VLDGD+D F++  L
Sbjct: 316 GLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKML 365


>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
 gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
          Length = 368

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 162/355 (45%), Positives = 226/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELTLVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE +E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 372

 Score =  308 bits (789), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 153/341 (44%), Positives = 218/341 (63%), Gaps = 1/341 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G  D +   + ++    +  +P  W +  +AK ++ E   L N       + +++ +  +
Sbjct: 22  GTLDMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSFLNLTNQVEELEL 81

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L+E+A+E+ +D   L E    +   + +++    E LL+   D+N+A LE+H G+GGTES
Sbjct: 82  LIEMAVEDPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDANNAILEIHPGSGGTES 141

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW   L RMYTRWA++  F+ E L+ H G+EAGI SAT+ + G NAYG+L+ E+GVHR 
Sbjct: 142 TDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFLRSEKGVHRF 201

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ+VN   + V
Sbjct: 202 VRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGV 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E         K E GWG 
Sbjct: 262 RLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENGWGS 321

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L
Sbjct: 322 QIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYL 362


>gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
 gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
          Length = 338

 Score =  308 bits (789), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 155/329 (47%), Positives = 216/329 (65%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  K  +P  W + + A+   +E   L        ++Q+   +  + LE+ L+EDD 
Sbjct: 5   IALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETELYLEM-LDEDD- 62

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+ +E   +L ++   +   +   LLS   D ++A LE+H G+GGTE+QDWA+ML RMYT
Sbjct: 63  SVKEELEASLIKLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLFRMYT 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS  RR
Sbjct: 123 RFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RTN E      V+DGD++ F+ A L
Sbjct: 303 VKDHRTNFEVAQVDKVMDGDIEGFIDAYL 331


>gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 465

 Score =  308 bits (789), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 153/341 (44%), Positives = 222/341 (65%), Gaps = 1/341 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   ++R   L    E P LW++ + A  + RE+  L   I  + + + +L +++ +L
Sbjct: 116 LKWKWLLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQFEQQLMEHIDML 175

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            LA +E D  +  E+   L  ++ E + K+  +LLSG+ D    ++EV AGAGG ES DW
Sbjct: 176 RLARDEGDNELETESMRALADMRREAKEKELNALLSGDNDPYPCFIEVQAGAGGVESMDW 235

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY  WA++R ++   +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 236 AAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAKSEIGVHRLVRI 295

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ + S   +I+ESD RI+ +R+ G GGQH NTT+SAVRI
Sbjct: 296 SPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQHANTTESAVRI 355

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG    CQ ERSQH N+A A  +L+++L +LE+ ++ ++      S +EI WG QI
Sbjct: 356 VHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQSLSEISWGNQI 415

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYVLQPY+MVKDLRTN E + P  VL+GDLDDF+ + L++
Sbjct: 416 RSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLSL 456


>gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
 gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
          Length = 329

 Score =  308 bits (789), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  EELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN E      V+DGDLD F+ A L
Sbjct: 299 HRTNFEVAQVDKVMDGDLDGFIDAYL 324


>gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272482|sp|Q03ZQ7|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 372

 Score =  308 bits (789), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 152/341 (44%), Positives = 219/341 (64%), Gaps = 1/341 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G  D +   + ++    +  +P  W +  +A+ ++ E   L N       + +++ +  +
Sbjct: 22  GTLDMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSFLNLTNQVEELEL 81

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L+E+A+E+ +D   L E    + + + +++    E LL+   D+N+A LE+H G+GGTES
Sbjct: 82  LIEMAVEDPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDANNAILEIHPGSGGTES 141

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW   L RMYTRWA++  F+ E L+ H G+EAGI SAT+ + G NAYG+L+ E+GVHR 
Sbjct: 142 TDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFLRSEKGVHRF 201

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ+VN   + V
Sbjct: 202 VRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGV 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E         K E GWG 
Sbjct: 262 RLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENGWGS 321

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L
Sbjct: 322 QIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYL 362


>gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 329

 Score =  308 bits (789), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 154/326 (47%), Positives = 211/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E +    V+DGDLD F+ A L
Sbjct: 299 HRTSFEVSQVDKVMDGDLDGFIDAYL 324


>gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
 gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
          Length = 370

 Score =  308 bits (789), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 219/351 (62%), Gaps = 6/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D     +++  L  +  DP LW +   A+ +          I  ++ 
Sbjct: 11  ELDSTLATIEKVMDPAALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D ++     D L+ +   +E  +  ++LSGE D  +A + +
Sbjct: 71  LRSRVDDMPVMFELAEEEGDTAL---ADDELEDLGAAIEALEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I++ + D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G 
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +
Sbjct: 308 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGI 356


>gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
 gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
          Length = 373

 Score =  308 bits (789), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 159/350 (45%), Positives = 223/350 (63%), Gaps = 3/350 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D D   +  + L  +   P LW +  +A+ +  +  +++  I  +  ++ RL
Sbjct: 17  LRNIEAVLDLDRLHEDKARLEEQASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGSLRSRL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +LLELA  EDD  +L E    +  +   ++  +  +LLSGE DS +A + + AGAG
Sbjct: 77  DDARVLLELAEAEDDPGVLAEVETEIGALTKSIQDMEVRTLLSGEYDSREALVAIRAGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L  E G
Sbjct: 137 GVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTLSVESG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PV + +  I+I E++ R+D YR+SG GGQ VNTT
Sbjct: 197 THRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTE 305
           DSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L  LE +++EE A + G  +   
Sbjct: 257 DSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLNGLKTDAA 314

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             WG Q+RSYVL PYQMVKDLRT  E  +PS V DG+LD F++A +  +K
Sbjct: 315 GSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRK 364


>gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
 gi|150274357|gb|EDN01434.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
          Length = 373

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/349 (43%), Positives = 226/349 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ LG     + A + L  L +++     W N+ +A+ + +  + L + +   K+ 
Sbjct: 14  LKPELDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKKR 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D L L E+  EE+D S++ E  +   ++   +E  +  +L +GE D N+  L +H
Sbjct: 74  LGEWEDLLTLCEMGNEEEDESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMYTRWAE+  F+ + ++  DG+EAGIKSAT++I+G NAYG L+
Sbjct: 134 AGAGGTEAQDWAQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+D+N+RR TSF+++ V P + +  ++EI   +  +  +R+SGAGGQH
Sbjct: 194 SEHGVHRLVRVSPFDANARRQTSFAAVEVMPDLPEDADVEIRPEEYEMQVFRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+ H  TG+VV CQ ERSQ +NK     MLRAKL EL++Q+  E  +  +  
Sbjct: 254 INKTSSAVRLIHHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +I WG QIRSYV  PYQ+VKD R+  E ++ + V+DGD+D F+ A L
Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYL 362


>gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
 gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
          Length = 326

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 215/322 (66%), Gaps = 2/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E    W +   A+ ++ E   L       KE++ RL D   L   A E  D  +L + + 
Sbjct: 2   EAAGFWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLNQ 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L RI+ E+   +   +LSGE D+ + YL ++AGAGGTE+ DW  ML RMY RW +KRK+
Sbjct: 62  ELFRIENELGELEIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDKRKW 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E +++  GE AG KS TL + G  A+G+ K E+GVHRLVRISP+DS SRRHTSF+S+ 
Sbjct: 122 KCEVVDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFASVD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D I+IEI+  D RIDT+RASGAGGQHVN TDSAVR+THIPTGVVV CQ +RSQ+
Sbjct: 182 VTPEITDDIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQRSQN 241

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           +NK   + +L++KLYE+E+ +RE +I  +G   K +IGWG QIR+YV  PY +VKD RT 
Sbjct: 242 QNKEACFKILKSKLYEMEVMEREKKIKELG-GEKMDIGWGSQIRNYVFHPYSLVKDTRTK 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E  +   V+DG LD F+ A L
Sbjct: 301 VESANVQAVMDGSLDLFVNAYL 322


>gi|145631266|ref|ZP_01787039.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|145633057|ref|ZP_01788789.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145637033|ref|ZP_01792696.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145639267|ref|ZP_01794873.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145641183|ref|ZP_01796763.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae R3021]
 gi|148828361|ref|YP_001293114.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229844833|ref|ZP_04464971.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|229846242|ref|ZP_04466354.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|319897322|ref|YP_004135518.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
 gi|144983193|gb|EDJ90688.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|144986283|gb|EDJ92862.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145269687|gb|EDK09627.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145271570|gb|EDK11481.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145274020|gb|EDK13886.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 22.4-21]
 gi|148719603|gb|ABR00731.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229811246|gb|EEP46963.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|229812214|gb|EEP47905.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|317432827|emb|CBY81192.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
          Length = 248

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/245 (61%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
 gi|254790922|sp|B9L0E3|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
          Length = 374

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 226/351 (64%), Gaps = 4/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L+ +G      +  Q++  L  +  DP LWQ+   A+ L+R    L + +   + 
Sbjct: 11  ELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQEWET 70

Query: 62  IQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +  +  D   LLEL AL  DD  +  +       +   V   +   LL+G+ D +DA L 
Sbjct: 71  LSQQARD---LLELRALASDDLELAGQVEQEATELAERVRQLELRLLLTGQYDGHDAILA 127

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VHAG GG ++QDWA MLLRMY RWA++  F  E +++ +GEEAGIKSAT+ ++GP AYG+
Sbjct: 128 VHAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGY 187

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE G HRLVR+SP+D+  RRHTSF+ + V P+V++  ++EI E D RIDT+RASG GG
Sbjct: 188 LKGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLVEEDDDVEIREEDIRIDTFRASGHGG 247

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  +L+A+L EL++++R+E     +
Sbjct: 248 QHVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLK 307

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                 GWG +IRSYVL PY MV D RT +   +   VL+G++D F++A L
Sbjct: 308 GKPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358


>gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK]
 gi|189040001|sp|A4TDE5|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           gilvum PYR-GCK]
          Length = 372

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/354 (45%), Positives = 223/354 (62%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + + D    R+  L +   DP LW +   A+ +  +  H  N +  ++E+
Sbjct: 12  LDTTLTTVERVVNVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+         E    L +++ ++   +  +LLSGE D  +A +
Sbjct: 72  RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEM- 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 362


>gi|15594420|ref|NP_212208.1| peptide chain release factor 2 [Borrelia burgdorferi B31]
 gi|2687953|gb|AAC66459.1| peptide chain release factor 2 (prfB) [Borrelia burgdorferi B31]
          Length = 348

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 158/348 (45%), Positives = 226/348 (64%), Gaps = 14/348 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ D
Sbjct: 4   TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123
              L E+A  E D + L+   + L+        KQ++ LL+      E D+N+A+L +H+
Sbjct: 64  LSDLCEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHS 115

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK 
Sbjct: 116 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 174

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHV
Sbjct: 175 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHV 234

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K
Sbjct: 235 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTK 294

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 295 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342


>gi|170718675|ref|YP_001783869.1| peptide chain release factor 2 [Haemophilus somnus 2336]
 gi|168826804|gb|ACA32175.1| peptide chain release factor 2 [Haemophilus somnus 2336]
          Length = 289

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 156/280 (55%), Positives = 208/280 (74%), Gaps = 1/280 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLEL++E +D +   E     + ++ ++   +F  + SG+ D+ D Y+++ AG+GGTE+Q
Sbjct: 7   LLELSVEAEDETTFNEAVAEAEELEKKLATLEFRRMFSGQHDNCDCYVDLQAGSGGTEAQ 66

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+  G+ AG+KSAT+ I G  A+GWL+ E G+HRLV
Sbjct: 67  DWTEMLLRMYLRWAESKGFKTELVEVSSGDVAGLKSATIRIAGEYAFGWLRTETGIHRLV 126

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSF++ +VYP +DD IEIEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 127 RKSPFDSNNRRHTSFAAAFVYPEIDDDIEIEINPADLRIDVYRASGAGGQHVNKTESAVR 186

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYE+E+ K+       E SK++IGWG Q
Sbjct: 187 ITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYEMEMMKKNADKQAMEDSKSDIGWGSQ 246

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 247 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 285


>gi|255311271|ref|ZP_05353841.1| peptide chain release factor 2 [Chlamydia trachomatis 6276]
 gi|255317573|ref|ZP_05358819.1| peptide chain release factor 2 [Chlamydia trachomatis 6276s]
 gi|297748590|gb|ADI51136.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-EC]
 gi|297749470|gb|ADI52148.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-LC]
          Length = 334

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 160/323 (49%), Positives = 211/323 (65%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V+ A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 10  FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 65

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA    +
Sbjct: 66  EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 186 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328


>gi|251771888|gb|EES52462.1| peptide chain release factor 2 [Leptospirillum ferrodiazotrophum]
          Length = 294

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/274 (54%), Positives = 199/274 (72%), Gaps = 2/274 (0%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           +D  IL E +  L      ++  + E +LS E   + A LE+H GAGGTESQDWA MLLR
Sbjct: 3   EDPEILGEAARILPLFVSRIDQLELEEILSDEYSDSPALLEIHPGAGGTESQDWAQMLLR 62

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWAE + ++T  +++  GEEAGIKSATL +KG +A+G+L+ E GVHRLVRISP+D+ 
Sbjct: 63  MYLRWAESKGYETAVIDLQPGEEAGIKSATLRVKGESAFGYLQAESGVHRLVRISPFDAA 122

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            RRHTSF+S++VYP ++  + +EI + D RIDT+RAS AGGQHVN T SAVR+THIPTG+
Sbjct: 123 KRRHTSFASVFVYPEIEGEVTVEIRDEDIRIDTFRASSAGGQHVNKTSSAVRLTHIPTGI 182

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVL 317
           V+  Q ERSQ +N+  A+ +L+A+L+ELE QK++ E+  I G  SK E  WG QIRSYVL
Sbjct: 183 VISSQNERSQIQNREMAFKVLKARLFELERQKKKAELDAISGAESKKENAWGSQIRSYVL 242

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QPYQ+VKD RT IE +   +VLDG +D +++  L
Sbjct: 243 QPYQIVKDHRTGIESSRVDEVLDGKIDLYIRGYL 276


>gi|319776546|ref|YP_004139034.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
 gi|317451137|emb|CBY87370.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
          Length = 248

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 194/245 (79%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+ + Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGEHDACNCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+     + E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 368

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 160/323 (49%), Positives = 211/323 (65%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V+ A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 44  FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 99

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA    +
Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 159

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 160 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362


>gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 367

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 160/350 (45%), Positives = 221/350 (63%), Gaps = 6/350 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D     +R+  L  +  DP LW +   A+ +  E       +  +  +
Sbjct: 12  LSATLTTIEKVMDPRAMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  ++ ELA EE D S+     D L  ++  VE  +  ++LSG+ D  +A + + 
Sbjct: 72  RGRLEDLPVMYELAEEEGDASL---ADDELDAVRDAVETLEVTTMLSGDYDQREAVINIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVR+SP+D+ +RR TSF+ + V PVV+ +  IEI +S+ R+D YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVVEQTDSIEIPDSEVRVDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGES 301
           VNTTDSAVR+TH+PTG++V CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G  
Sbjct: 249 VNTTDSAVRLTHVPTGIMVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALGAG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                 WG Q+RSYVL PYQMVKDLRTN E   PS VL GD+DDF++A +
Sbjct: 309 GNA--SWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFLEAGI 356


>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
 gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 371

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/355 (45%), Positives = 224/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA  EDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RSRLDDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
 gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
          Length = 336

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 160/328 (48%), Positives = 219/328 (66%), Gaps = 2/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  +  +P  W    +A+  ++    L + ++  + +   L D  +L EL  EE+D + 
Sbjct: 1   MLERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAA 60

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             E    L  +  +V   +   LLSG  D  +A + +HAGAGGTE+QDW  MLLRMYTRW
Sbjct: 61  AAEVKQGLAVVAQKVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYTRW 120

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE+R FK E L++  G+EAG KSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+  RRHT
Sbjct: 121 AERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRRHT 180

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+ V P VDD ++++I+  D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ
Sbjct: 181 SFASVDVLPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVVTCQ 240

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
            ERSQ  N+  A  ML+A+L +LEL+K+E E+A +    + EI WG QIRSYV  PY +V
Sbjct: 241 NERSQLANRLAAMKMLKARLIDLELRKKEAELAAL-RGEQQEIAWGSQIRSYVFHPYSLV 299

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KD RT  E  +   V+DG++D F+ A L
Sbjct: 300 KDHRTGHETGNVGAVMDGEIDSFIAAYL 327


>gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|122940216|sp|Q02ZM8|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 365

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 148/348 (42%), Positives = 221/348 (63%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++N      D D   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  NMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  +   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+TH+PTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG++D F+ A L
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYL 361


>gi|225549713|ref|ZP_03770678.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
 gi|225369673|gb|EEG99121.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
          Length = 348

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/348 (45%), Positives = 226/348 (64%), Gaps = 14/348 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ D
Sbjct: 4   TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123
              L E+A  E D + L+   + L+        KQ++ LL+      E D+N+A+L +H+
Sbjct: 64  LSDLCEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHS 115

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK 
Sbjct: 116 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 174

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHV
Sbjct: 175 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHV 234

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K
Sbjct: 235 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTK 294

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 295 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342


>gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 365

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 157/350 (44%), Positives = 223/350 (63%), Gaps = 6/350 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  +  DP LW +   A+ +  E  ++   +  +  +
Sbjct: 12  LDSTLTTIEKVIDLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVASL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++R+ D  ++ ELA EE + +++    D L  ++  +   + +++LSGE D  +A + + 
Sbjct: 72  RERIDDLPVMYELAEEEGEPALV---DDELAALEESIGSLEVQTMLSGEYDEREAVVNIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMYTRWAEK   K E  +I   EEAGIKSAT +++G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I +SD R+D YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDSDIRVDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L++KL  LE +++EE A +    
Sbjct: 249 VNTTDSAVRITHLPTGIVVTCQNEKSQIQNKASALGVLQSKL--LERKRQEEKAEMDALG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +     WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D F+++ +
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGI 356


>gi|219887937|gb|ACL54343.1| unknown [Zea mays]
          Length = 467

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   ++R   L    E P LW++ + A  + RE+  L   I  + + +  L +++ +L
Sbjct: 118 LKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEML 177

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV AGAGGTES DW
Sbjct: 178 RLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 237

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY  WA++R +K   +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 238 AAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D+    +I +SD RI+ +R+ G GGQH NTT+SA+RI
Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      S  EI WG QI
Sbjct: 358 VHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFI 452


>gi|242041179|ref|XP_002467984.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
 gi|241921838|gb|EER94982.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
          Length = 467

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   ++R   L    E P LW++ + A  + RE+  L   I  + + +  L +++ +L
Sbjct: 118 LKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEML 177

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV AGAGGTES DW
Sbjct: 178 RLAREENDNELEMESMRALADMRRSAKEKELNALLSGDNDSCPCFIEVQAGAGGTESMDW 237

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY  WA++R +    +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 238 AAMVMNMYRSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D+    +I +SD RI+ +R+ G GGQH NTT+SA+RI
Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S  EI WG QI
Sbjct: 358 VHIPTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RSYVL PY+MVKDLRTN E + P  VL+GD+DDF+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFI 452


>gi|226528475|ref|NP_001148129.1| peptide chain release factor 2 [Zea mays]
 gi|195616002|gb|ACG29831.1| peptide chain release factor 2 [Zea mays]
          Length = 467

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   ++R   L    E P LW++ + A  + RE+  L   I  + + +  L +++ +L
Sbjct: 118 LKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEML 177

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV AGAGGTES DW
Sbjct: 178 RLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 237

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY  WA++R +K   +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 238 AAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D+    +I +SD RI+ +R+ G GGQH NTT+SA+RI
Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      S  EI WG QI
Sbjct: 358 VHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFI 452


>gi|257452270|ref|ZP_05617569.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|257465930|ref|ZP_05630241.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917086|ref|ZP_07913326.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317058813|ref|ZP_07923298.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313684489|gb|EFS21324.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313690961|gb|EFS27796.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 326

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 157/274 (57%), Positives = 200/274 (72%), Gaps = 9/274 (3%)

Query: 87  ETSDNLQRIKLEVEYKQF----ES-----LLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E  D + +I+LE ++KQ     ES     LL GE D N+A + +H+GAGGTE+ DWA+ML
Sbjct: 47  EAGDEMSQIELEEKHKQLLKDMESFSTSLLLDGEYDGNNAIVTIHSGAGGTEACDWADML 106

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTRW   +K+K E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D
Sbjct: 107 YRMYTRWCNDKKYKVEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFD 166

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N +RHTSF+S+ V P VD+S+E+EI  SD RIDTYRASGAGGQHVN TDSAVRITH PT
Sbjct: 167 ANKKRHTSFASVEVVPEVDESVEVEIEASDIRIDTYRASGAGGQHVNMTDSAVRITHFPT 226

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VV CQ+ERSQ  N+  A  ML++KL E+EL+K+EE     +  ++EIGWG QIRSYV 
Sbjct: 227 GIVVTCQKERSQLSNRETAMKMLKSKLLEIELKKKEEEMKKIQGEQSEIGWGSQIRSYVF 286

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QPY MVKD RT +E  +   V+DGDLDDFM   L
Sbjct: 287 QPYTMVKDHRTGVEIGNIKAVMDGDLDDFMNGYL 320


>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 368

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 162/355 (45%), Positives = 224/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|227832559|ref|YP_002834266.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790912|sp|C3PES4|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 368

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 221/351 (62%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS  L  +  + D +   +R+  L  +  DP LW +   A+ +  E       +  +  
Sbjct: 11  ELSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D +  +     L+ +   +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRIEDLPVMSELAEEEGDEASQELVETELKELGAAIESLEVTTMLSGEYDEREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ +S+ R+D YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G 
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +
Sbjct: 311 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGI 359


>gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
 gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
          Length = 325

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/322 (46%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E   
Sbjct: 2   QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             + IK E +  + E+LLSGE D N+  + +H+  GGT++QDW +ML RMYTRWAEK  F
Sbjct: 61  EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRWAEKEGF 120

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI 
Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH
Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240

Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A  +L++KL EL E   +E+I ++    K ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++   V++GD++ F+   L
Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321


>gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136]
          Length = 359

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/345 (44%), Positives = 217/345 (62%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD       L  L  +   P  W N   A+  +    +L N I  ++E++ RL D  
Sbjct: 5   GGIFDVGKLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRLEDFF 64

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L E+A  E+D +   E       ++  +   +   LL+GE D   A++ +H GAGGTES
Sbjct: 65  VLGEIAQHENDLASWTEVEKEYHAMEKALSDFELAMLLTGELDKKGAFVTIHCGAGGTES 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLRMY RW E+  +KTE ++   GEE G++SA   + G  A+G L  E+GVHRL
Sbjct: 125 CDWADMLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERGVHRL 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF+S+ V P VD+ I IE++E+D + +TYR+ G GGQ+VN  ++AV
Sbjct: 185 VRISPFDSAKRRHTSFASVDVTPEVDEDIGIELNEADIKFETYRSGGKGGQNVNKVETAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+ H PTG++V CQ +RSQ KN+  A NML+AKLY+LE  K++         K ++ WG 
Sbjct: 245 RLIHEPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDVAWGS 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYV QPYQMVKD RT  +  +  +V+DGDLD F++A L  +K
Sbjct: 305 QIRSYVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLRGRK 349


>gi|260914424|ref|ZP_05920893.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
 gi|260631525|gb|EEX49707.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
          Length = 248

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 192/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AGIK
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q    L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909]
 gi|123602195|sp|Q3K2F4|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus agalactiae A909]
          Length = 365

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 154/338 (45%), Positives = 218/338 (64%), Gaps = 2/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D   + ++ L  +  +P  W + I A+   +E   L         +Q+   +  +LL
Sbjct: 24  LDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLL 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ L+EDD S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW
Sbjct: 84  EM-LDEDD-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDW 141

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
            ++LLRMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRI
Sbjct: 142 GDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRI 201

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS  RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+T
Sbjct: 202 SPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLT 261

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIR
Sbjct: 262 HIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV  PY MVKD RTN E      V+DG+++ F+ A L
Sbjct: 322 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYL 359


>gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
 gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
          Length = 325

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 209/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+  E  + 
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELVEQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  + + +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LTELDMMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|110597266|ref|ZP_01385554.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
 gi|110341102|gb|EAT59570.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
          Length = 363

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/347 (45%), Positives = 228/347 (65%), Gaps = 5/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIK-EIQDR 65
           N  GG+FD D   +++  L   T DP  W +  EA  +++E  +H      + K   +++
Sbjct: 16  NSYGGIFDVDQRKEKVEDLEKITADPAFWNDQKEAHKILKELNEHKTWTEGYEKLAAKEK 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           +C  L  LE+A E +D S   E S  +  I+ E+   +F+++LSG+ D+ +A + +HAGA
Sbjct: 76  VC--LDELEIASELEDESFSDELSTAIAEIEQEIAAIEFKNMLSGKDDAGNALITIHAGA 133

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+G  AYG+LK E 
Sbjct: 134 GGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIQGAYAYGYLKAEN 193

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SPYDSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN 
Sbjct: 194 GVHRLVRVSPYDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNK 253

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY+ + ++ +      E  K +
Sbjct: 254 VETAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKK 313

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           I WG QIRSYVL   + +KD RTN E+     VLDGDLD+FM+  L+
Sbjct: 314 IEWGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEHYLS 359


>gi|85057585|ref|YP_456501.1| peptide chain release factor 2 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789690|gb|ABC65422.1| bacterial peptide chain release factor 2 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 370

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 160/334 (47%), Positives = 217/334 (64%), Gaps = 5/334 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q +  LN   +    WQN  +A  + ++   L +  + ++ ++    D      L    +
Sbjct: 31  QTIEKLNCAMQKEDFWQNPKKAVTISQQFNDLQDKKNTLEILEQNYLDLETFFNLNESPN 90

Query: 81  DCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           + S +L+E   NL +   + + K F   L+   D N+A L  H GAGGTESQDW  ML R
Sbjct: 91  EASALLEEELKNLTKSVFDFKIKIF---LNQPYDINNAILLFHPGAGGTESQDWCEMLFR 147

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY ++A+K+ FKTE L+   GE AG+KSATLLIKG  AYG+LK E+GVHRLVRISP+DSN
Sbjct: 148 MYQKYAQKKNFKTEILDYQLGEGAGVKSATLLIKGTYAYGYLKAEKGVHRLVRISPFDSN 207

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           S+RHTSF +  V P +++ I+I +   D +ID +R+SGAGGQHVNTTDSAVRITH+PTG+
Sbjct: 208 SKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQHVNTTDSAVRITHLPTGL 267

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           VV CQ ERSQ KNK +A  ML+ KL++L   Q++E+ A   +S + E GWG QIRSYV  
Sbjct: 268 VVGCQNERSQIKNKEKALQMLKTKLFQLASKQQKEQNAKKFQSDQKENGWGSQIRSYVFH 327

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           PY+MVKD RTN E      V+DG++D+F+   L 
Sbjct: 328 PYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361


>gi|25453244|sp|P59102|RF2_BUCAP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/284 (51%), Positives = 212/284 (74%), Gaps = 1/284 (0%)

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +I L+LA+E  D +I+QE S+ +++I  +++  +F  + S + D  + Y++V AG+GG +
Sbjct: 80  IIFLDLAIETKDNAIIQEISEEIKKIAEKIQELEFYRMFSNQHDHCNCYIDVQAGSGGVD 139

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW+ +LLRMY +W++K+ FKTE +E   GE  GIKS+T+ + G  A+GWL+ E G+HR
Sbjct: 140 AQDWSKILLRMYLKWSDKKGFKTEIIEESTGEIVGIKSSTIKVSGQYAFGWLRTETGIHR 199

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           L+R SP+DS  RRHTSFSSI++YP ++D I IEI+ SD RID YRASGAGGQHVN T+SA
Sbjct: 200 LIRKSPFDSGKRRHTSFSSIFIYPDIEDKINIEINPSDLRIDVYRASGAGGQHVNRTESA 259

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +V QCQ  RSQHKNK QA   +++KLYE+++++++E     E +K++I WG
Sbjct: 260 VRITHLPTNIVTQCQNNRSQHKNKEQAIKQMKSKLYEMKIKEKKEKQKKIEKNKSDISWG 319

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSY+L   + +KDLRT +EK +   VLDGDLDDF++ +L +
Sbjct: 320 NQIRSYILDNSK-IKDLRTGVEKYNVQSVLDGDLDDFIEQSLIM 362


>gi|260889274|ref|ZP_05900537.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
 gi|260860685|gb|EEX75185.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
          Length = 352

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 178/364 (48%), Positives = 233/364 (64%), Gaps = 22/364 (6%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-----QNVIEA----KMLMRERQH 51
           MKL+  L   GG+FD +N    +  L  KT +   W     Q +++A    K L+ E   
Sbjct: 1   MKLT--LKKSGGIFDIENLKNEIDGLEKKTFEADFWNSENSQEILKAISTNKKLLEEYSS 58

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+     +  I          +E  +E  D S   E     Q +K E++  + + LL  E
Sbjct: 59  LNGLFEDVSTI----------IEF-IEMGDNSFENELEQKAQDLKNEIDNFKTKLLLDEE 107

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+A L +++GAGGTE+ DWA ML RMY RWA +  FK E L+   GEEAGIKS TL 
Sbjct: 108 YDMNNAILTINSGAGGTEACDWAEMLYRMYDRWANRHDFKVEILDSLAGEEAGIKSVTLN 167

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  AYG+LKGE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D +EI+I   D +ID
Sbjct: 168 IKGNYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVEIDIRTEDLKID 227

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQHVNTTDSAVRITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+K
Sbjct: 228 TYRASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEK 287

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RE+     + ++++I WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L
Sbjct: 288 REKEMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYL 347

Query: 352 AIKK 355
              K
Sbjct: 348 KYAK 351


>gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223629|sp|A2RLF5|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 365

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 148/348 (42%), Positives = 220/348 (63%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++N      D D   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  TMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  +   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+TH+PTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG++D F+ A L
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYL 361


>gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
 gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
          Length = 329

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 149/282 (52%), Positives = 201/282 (71%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ++LE++ E++     +E S  L+ ++ +V+  + ++LL GE D N+A + +HAGAGGTE+
Sbjct: 46  MMLEISKEDNTEEYEKEISKTLKSLEEKVDEFKIKTLLVGEYDKNNAIMSIHAGAGGTEA 105

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW   +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRL
Sbjct: 106 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 165

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D   RRHTSF+S+ V+P + DS  I+I + D ++DTYRASGAGGQHVN TDSAV
Sbjct: 166 VRISPFDQQKRRHTSFASVDVFPEIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAV 225

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTGV VQCQ ERSQ  N+  A +ML AKL  ++ +++ E     +    +I WG 
Sbjct: 226 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 285

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV QPY +VKD RTN E +   DVLDGDLD F+ A L+
Sbjct: 286 QIRSYVFQPYTLVKDHRTNFESSQVQDVLDGDLDKFINAYLS 327


>gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
 gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
          Length = 329

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 154/326 (47%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVR 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324


>gi|46396627|sp|Q89AC4|RF2_BUCBP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 228/349 (65%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q+N L    D+D    RL  +N + + P  W++    K + +E+  L + ++ I +I
Sbjct: 15  LVSQINKLKRRLDYDIKKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKI 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + + + +L L    +  SIL       + I+  +   +  S+  G+ D    Y+++ 
Sbjct: 75  DNDVQELIDILNLENSNNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQ 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GG E+QDWA+MLLRMY RWAE +KFK + +E   GE  GIKSAT+ + G  A+GW +
Sbjct: 135 SGSGGVEAQDWASMLLRMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFR 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP++++ RRHTSFSS++VYP++DD+I ++I+  D +ID YRASGAGGQH
Sbjct: 195 TETGIHRLVRKSPFNAHHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRI H+PTG+VVQCQ +RSQHKNK QA   L+AKLYE  + +++    I E++
Sbjct: 255 VNKTESAVRIRHLPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENN 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  IGWG QIRSY L   + +KDLRT +E  +   VLDG LD F++ +L
Sbjct: 315 KLNIGWGHQIRSYTLDNSR-IKDLRTGVESKNIQSVLDGGLDLFVECSL 362


>gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597]
 gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597]
          Length = 325

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 210/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ +E  + 
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDFLAE--DESVHEELVEQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87]
 gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87]
          Length = 333

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 219/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ +   L + ++  +++ + + D     EL  EE D  + +E   +
Sbjct: 4   DPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQEEYDEDMKEELESD 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           + + K +++  + + LL G  D+N+A  E+H GAGGTESQDWA+MLLRMY R+ E+  F 
Sbjct: 64  VIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQRYCEQNGFN 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+ +L ++E E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQQKLDEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F++A L
Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324


>gi|145635061|ref|ZP_01790767.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148826180|ref|YP_001290933.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
 gi|145267669|gb|EDK07667.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148716340|gb|ABQ98550.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
          Length = 248

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGKHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|332290838|ref|YP_004429447.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168924|gb|AEE18179.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 368

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 155/325 (47%), Positives = 220/325 (67%), Gaps = 2/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT DP+ W +  EA+  M+  +     ++  +E Q  + D  +L E A E +  +  +  
Sbjct: 36  KTFDPNFWNDPKEAEAFMKTLRSKKKWVTDYEEAQTFVEDLEVLYEFAKEGE--APEENV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            D   +    +E  +F ++LS E D     L++ AGAGGTES DWA ML+RMY  +AEK+
Sbjct: 94  QDRYDKAAAFIEDIEFRNMLSEEGDELSCVLQITAGAGGTESCDWAAMLMRMYLMYAEKQ 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K + L   +G+ AGIK+ +L I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S
Sbjct: 154 GWKVKELNFQEGDVAGIKTVSLEIEGDFAFGWLKGENGVHRLVRISPFDSNAKRHTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+VDDSIEIEI+ +D  I T R+SGAGGQ+VN  ++ V++TH PTG+ + C   RS
Sbjct: 214 VYVYPLVDDSIEIEINPADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRS 273

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH N+A+A  MLR++LYELEL+K+ E  N  E+ K  I WG QIR+YVL PY++VKD+RT
Sbjct: 274 QHDNRAKALQMLRSQLYELELRKQMEARNAIEADKKAIEWGSQIRNYVLHPYKLVKDVRT 333

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
            +E  +   VLDG++D F+K  L +
Sbjct: 334 AVETGNTDAVLDGNIDLFLKGYLMM 358


>gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
 gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
          Length = 329

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 154/326 (47%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324


>gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
 gi|254790911|sp|B8G607|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
          Length = 367

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 154/342 (45%), Positives = 217/342 (63%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L G  D       +  L  +  DP LW     A+ LM+    L   ++   ++  R+   
Sbjct: 19  LRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDLDHRMTSL 78

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA +E D S+  + +  L+ ++ EV  ++ E LLSG  D  DA+L + AG GGT+
Sbjct: 79  AELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQAGMGGTD 138

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTRWAE+R +    +++ +GEEAGIKSAT+ I+GP AYG+ + E GVHR
Sbjct: 139 AQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYARAEAGVHR 198

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           L+R+SP+++   R TSF+ + V P VDD+ E+EI   D RID +R+ G GGQ VNTTDSA
Sbjct: 199 LIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQGVNTTDSA 258

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L E ELQ++ E          E  +G
Sbjct: 259 VRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGEYREAAFG 318

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            Q+R+Y L P  +VKD RT+ E ++   VLDG++D F++A L
Sbjct: 319 NQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFL 360


>gi|39938959|ref|NP_950725.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
 gi|39722068|dbj|BAD04558.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
          Length = 369

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 221/352 (62%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  L    D     Q +  LN   +    W+   +A  + ++   L +  + ++ +
Sbjct: 13  LHQNLQDLKQALDIKKTNQTIEKLNYAMQKEDFWKYPQKAVTISQQFNDLQDKKTTLETL 72

Query: 63  QDRLCDNLILLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +    D   L  L    +  S +L+E   NL +   + + K F   L+   D N+A L  
Sbjct: 73  KQNYLDLETLFNLNESPNKTSALLEEELKNLTKAVFDFKIKIF---LNQSYDINNAILLF 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GE AGIKSATLLIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQPGEGAGIKSATLLIKGTYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+NS+RHTSF +  V P +++ I+I +   D +ID +R+SGAGGQ
Sbjct: 190 KAEKGVHRLVRISPFDANSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGE 300
           HVNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A  ML+ KL++L  +K +EE A   +
Sbjct: 250 HVNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKKQKEENAKKFQ 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S + E GWG QIRSYV  PY+MVKD RTN E      V+DG++D+F+   L 
Sbjct: 310 SDQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361


>gi|330828582|ref|YP_004391534.1| peptide chain release factor 2 [Aeromonas veronii B565]
 gi|328803718|gb|AEB48917.1| Peptide chain release factor 2 [Aeromonas veronii B565]
          Length = 300

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 153/281 (54%), Positives = 205/281 (72%), Gaps = 1/281 (0%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+ LA+E +D     E     ++++ ++   +F  + SG+ D +D Y+++ +G+GGTE+
Sbjct: 17  MLVSLAVEGEDEETFNEAIAESEQLEAKLVDLEFRRMFSGQHDGSDCYIDIQSGSGGTEA 76

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANM+LRMY RW +   +K E +E  +G+ AGIKSAT+   G  A+GWL+ E GVHRL
Sbjct: 77  QDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWLRTETGVHRL 136

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 137 VRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAV 196

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+       E +K++IGWG 
Sbjct: 197 RITHVPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEETKSDIGWGS 256

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 257 QIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 296


>gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 327

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +++   +  + +E+ LEED+ S+  E  ++
Sbjct: 3   EPDFWNDTISAQKTSQELNELKVKFDTFHNMENLSEETELYMEM-LEEDE-SVKGELEES 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + FK
Sbjct: 61  LLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLSFQGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD+D F+ A L
Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320


>gi|325478551|gb|EGC81663.1| peptide chain release factor 2 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 347

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 165/343 (48%), Positives = 231/343 (67%), Gaps = 4/343 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD       +  L  K++ P  W +   A+  M +     + +    +++D + DN  +
Sbjct: 4   LFDPARLKDEIEKLEKKSQSPDFWNDSDAAQKTMADLALKKDDLEDYNKLKDGIADNTDM 63

Query: 73  LELA-LEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L+L  L ED +   ++E   +L+++    +  + ++ LSGE D N+AYL ++AGAGG E+
Sbjct: 64  LDLVELSEDSELKTIEEVEISLKKLDKLAQAMKLKTQLSGEYDKNNAYLSINAGAGGLEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+ML RMYTR+ + R FK +  ++++ E  GIKS T+ +KG  AYG+LKGE+GVHRL
Sbjct: 124 TDWADMLFRMYTRYFDDRGFKYDIKDLNNEEAGGIKSVTIHVKGSYAYGYLKGEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS SRRHTSFSS+ ++P +DD I+I+I  SD RIDTYRASGAGGQHVN TDSAV
Sbjct: 184 VRISPFDSQSRRHTSFSSVDIFPELDDDIQIDIDPSDLRIDTYRASGAGGQHVNKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RITHIPTGVV   Q ERSQ +N+  A N+L +KL ++ E ++RE+I +I +   ++I WG
Sbjct: 244 RITHIPTGVVATSQAERSQIQNRQTAMNLLMSKLVQIKEEEQREKIEDI-QGKYSQIAWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYV QPY MVKD RTN E  +   V+DG++  F+ A LA
Sbjct: 303 SQIRSYVFQPYTMVKDHRTNFEMGNVESVMDGNIQGFIDAYLA 345


>gi|307332073|ref|ZP_07611163.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
 gi|306882296|gb|EFN13392.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
          Length = 830

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 163/355 (45%), Positives = 226/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  +L   +   +E+
Sbjct: 473 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 532

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L+ ++  V+  +  +LLSGE DS +A + V 
Sbjct: 533 RGRIDDLEVLFELAADEGDADARAEAESELEAVRKAVDEMEVRTLLSGEYDSREALVNVR 592

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KT+  E    EEAGIKS T  ++ P AYG L 
Sbjct: 593 AEAGGVDAADFAEQLQRMYLRWAERHGYKTQIYETSYAEEAGIKSTTFAVQIPYAYGTLS 652

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 653 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 712

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 713 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DAL 769

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 770 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 824


>gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321]
 gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321]
          Length = 325

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 209/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ +E  + 
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELVEQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|170017955|ref|YP_001728874.1| peptide chain release factor 2 [Leuconostoc citreum KM20]
 gi|238688939|sp|B1MW26|RF2_LEUCK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169804812|gb|ACA83430.1| Peptide chain release factor 2 [Leuconostoc citreum KM20]
          Length = 372

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 152/341 (44%), Positives = 217/341 (63%), Gaps = 1/341 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G  D +   + ++    +  +P  W +  +A+ ++ E   L N       + ++  +  +
Sbjct: 22  GTLDLEALTEEIADFENRMTEPGFWDDNTKAQKVIEENNVLKNRRDSFLNLTNQAEEIEV 81

Query: 72  LLE-LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L++ LA +  D     E +D++ + + +VE    E LL+   D+N+A LEVH G+GGTES
Sbjct: 82  LIDMLAEDPGDVDTATELADSIAQAQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTES 141

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW   L RMYTRWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+L+ E+GVHR 
Sbjct: 142 TDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRF 201

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN   + V
Sbjct: 202 VRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGV 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E         K E GWG 
Sbjct: 262 RLTHEPTGIVVSSTVERTQYGNRDYAMKLLKSKLYQLELEKQEAERAALTGEKMENGWGS 321

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L
Sbjct: 322 QIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYL 362


>gi|296436914|gb|ADH19084.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222]
          Length = 334

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 159/323 (49%), Positives = 211/323 (65%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V+ A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 10  FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 65

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA    +
Sbjct: 66  EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +D+ IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 186 VFPEIDNKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328


>gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
          Length = 338

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 157/329 (47%), Positives = 221/329 (67%), Gaps = 6/329 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K ED   W N+  ++ +++  + L+  +         L +  IL EL  E  D  + +E 
Sbjct: 11  KMEDADFWNNLELSQHIVKRNKELERTLDIYSSAFSELEEVEILFELTKE--DSELEKEL 68

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +  +  ++E  + ++LL GE D N+A L +HAG+GG ++QDWA MLLRMY R+    
Sbjct: 69  EQCINELSEKMEQLKIQTLLDGEYDGNNAILSIHAGSGGLDAQDWAQMLLRMYLRFCHDM 128

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            ++   L+     EAGIKS TL I+GPNAYG+LK E+GVHR+VRISP+DS+ +RHTSF+S
Sbjct: 129 GYRVIELDSLSDSEAGIKSVTLQIEGPNAYGFLKSEKGVHRIVRISPFDSSGKRHTSFTS 188

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DD++E++I  +D +IDTYRASGAGGQHVN TDSAVRITHIPTG+V+ CQ ERS
Sbjct: 189 VDVIPEMDDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGIVITCQNERS 248

Query: 269 QHKNKAQAWNMLRAKLYELELQK-REEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           QH N+  A  ML +KL ++++++ +E+I +I GE S  +I WG QIRSYV QPY +VKD 
Sbjct: 249 QHSNRETAMKMLFSKLMDIKIREHKEKIEDISGEYS--QIAWGSQIRSYVFQPYTLVKDH 306

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  S   V+DG++  F+ A L  +K
Sbjct: 307 RTNHEIGSVQSVMDGNIMPFINAYLKQQK 335


>gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 347

 Score =  305 bits (782), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 154/339 (45%), Positives = 224/339 (66%), Gaps = 3/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD     + L  L  K ++P  W +  +A+ + ++ + + + I    +++ +L D++ +L
Sbjct: 7   FDRAGLEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQL-DDIDVL 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  +EEDD     E    ++ I+ E+E    + LLSGE D N+A + +H G GGT++ DW
Sbjct: 66  KDIMEEDDIESANEIIQTIKSIEHEIEDYNMKILLSGEYDKNNAIVTLHVGVGGTDANDW 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             MLLRMYTRW E + +  E +++  G+EAGIKS TL + G   YG+LK E+G+HRLVRI
Sbjct: 126 TEMLLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEKGIHRLVRI 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY++N +R TSF+S+ V P +    +I I   D ++DTYR+SG+GGQH+N TDSAVRIT
Sbjct: 186 SPYNANGKRQTSFASMEVLPELTKEQDITIRPDDLKVDTYRSSGSGGQHINKTDSAVRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312
           HIPTG+VVQCQ ERSQ  N+  A  ML++KL EL E   +E+I ++    K ++GWG QI
Sbjct: 246 HIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELK-DMGWGSQI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV  PY MVKD RTN+E ++ + V+DGD+D F+ A L
Sbjct: 305 RSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFL 343


>gi|284040585|ref|YP_003390515.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
 gi|283819878|gb|ADB41716.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
          Length = 358

 Score =  305 bits (782), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D+DN  ++L+ L  +T  P  W +   A+ +M++ + L    +  +++
Sbjct: 9   LRARVEALRGYLDYDNKKEQLAELEQQTFQPEFWTDAARAEGVMKQVRGLKGWTTGYEKL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E    E      +E  +  +++   +E  + + +L  E D   A LE++
Sbjct: 69  NSQFGDLETLFEFY--EAGDVTEEEVDEEGRKVTTTLEELELKKMLGNEEDQLSAVLEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML RMY RWAEK  +  + ++  +G+ AGIKSAT+ + GP AYG+LK
Sbjct: 127 AGAGGTESQDWADMLYRMYMRWAEKHGYGLKQVDYQEGDTAGIKSATIEVDGPLAYGFLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++ YP++DD+I IE++ +D   DT+R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLIDDTINIEVNPADIDWDTFRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G++++CQQERSQ +NK  A  +L++KLYE+E+QKR       E+S
Sbjct: 247 VNKVETAVRLKHKPSGLIIECQQERSQLQNKEVAIRLLKSKLYEIEVQKRNAARAEVEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYVL   + VKD RT  + ++   VLDGDLD F+KA L
Sbjct: 307 KQKIEWGSQIRSYVLDD-RRVKDHRTGYQTSNTEAVLDGDLDPFIKAFL 354


>gi|319401169|gb|EFV89384.1| peptide chain release factor 2 [Staphylococcus epidermidis FRI909]
          Length = 332

 Score =  305 bits (782), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 223/322 (69%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ +   L + +S   ++ + + D     EL  EE D  + +E  + 
Sbjct: 3   DPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELEEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+  FK
Sbjct: 63  VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++E E+A I    + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DG++  F++A L
Sbjct: 302 EETGKVDAVMDGEIGPFIEAYL 323


>gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
 gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
          Length = 329

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 149/282 (52%), Positives = 201/282 (71%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ++LE++ E++     +E S  L+ ++  V+  + ++LL GE D N+A + +HAGAGGTE+
Sbjct: 46  MMLEISKEDNTEEYEKEISKTLKNLEKNVDEFKIQTLLVGEYDRNNAIMSIHAGAGGTEA 105

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW   +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRL
Sbjct: 106 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 165

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D   RRHTSF+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAV
Sbjct: 166 VRISPFDQQKRRHTSFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAV 225

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTGV VQCQ ERSQ  N+  A +ML AKL  ++ +++ E     +    +I WG 
Sbjct: 226 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 285

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV QPY +VKD RTN E +   DVLDGDLD F+ A L+
Sbjct: 286 QIRSYVFQPYTLVKDHRTNCESSQVQDVLDGDLDKFINAYLS 327


>gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu]
 gi|238687385|sp|B0B832|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           434/Bu]
          Length = 368

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 159/323 (49%), Positives = 210/323 (65%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V  A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 44  FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  M+LRMY RWA    +
Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 159

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 160 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 220 VFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362


>gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|238687484|sp|B0BC97|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 368

 Score =  305 bits (781), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 159/323 (49%), Positives = 210/323 (65%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V  A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 44  FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  M+LRMY RWA    +
Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 159

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 160 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362


>gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334]
 gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334]
          Length = 329

 Score =  305 bits (781), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 154/326 (47%), Positives = 209/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQ 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  EELVTQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324


>gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5]
 gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5]
          Length = 373

 Score =  305 bits (781), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 224/354 (63%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   ++ + L  +   P LW +  +A+ +  +  +++  I+ + ++
Sbjct: 13  LDATLRNIEAVLDLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEITKLGDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LLELA  EDD   L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRLDDAGVLLELAQAEDDPGALTEVESEITGLTKAIQEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PV + +  I+I E++ R+D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGES 301
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L      ++ E++A +   
Sbjct: 253 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERKRQEEEEKLAGLKTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           S +   WG Q+RSYVL PYQMVKDLRT  E  +PS V DGDLD F++A +  +K
Sbjct: 313 STS--SWGDQMRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIEAGIRWRK 364


>gi|288575018|ref|ZP_06393375.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570759|gb|EFC92316.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 336

 Score =  305 bits (781), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 160/323 (49%), Positives = 210/323 (65%), Gaps = 2/323 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W    +A+ +  +   L++ IS    +     D ++L EL  EEDD  +  E     
Sbjct: 15  PDFWGR-DDAQRISTDLARLESRISSWDRMSSEYQDLVVLAELLDEEDDQELEAEFFSRS 73

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           + +   ++    E LL+G+ D N+A + VHAG+GG +SQDWA ML RMY RW E   +KT
Sbjct: 74  ESLSKSMDAFSMELLLNGDYDGNNAIMTVHAGSGGLDSQDWAEMLYRMYLRWCESNHYKT 133

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           + L+    EE GIK+ TLL++G  AYG+L+ E GVHRLVRISP+D+  RRHTSF+S+ V 
Sbjct: 134 KILDYQRDEEGGIKTVTLLVEGDFAYGYLQSEVGVHRLVRISPFDTAKRRHTSFASVDVA 193

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P + D +E++I   D RIDT+RASGAGGQHVN TDSAVRITHIPTG+VV CQ ERSQH N
Sbjct: 194 PELPDDVEVDIRTEDLRIDTFRASGAGGQHVNMTDSAVRITHIPTGIVVSCQNERSQHMN 253

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           KA A  +LR KLYE  + +R++  +     K EI WG QIRSYVL PY MVKD RT  E 
Sbjct: 254 KAVAMQVLRGKLYERSMSERQDTLD-SLHDKKEISWGNQIRSYVLHPYTMVKDHRTGEET 312

Query: 333 TSPSDVLDGDLDDFMKATLAIKK 355
            + + VLDGDL+ F+ + L  +K
Sbjct: 313 GNAAAVLDGDLERFILSYLRWRK 335


>gi|221134749|ref|ZP_03561052.1| Protein chain release factor B, RF-2 [Glaciecola sp. HTCC2999]
          Length = 248

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 191/245 (77%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +   D ND YL++ +G+GGTE+QDWANMLLRMY RW E+  FKTE +E+ DG+ AGIK
Sbjct: 1   MFAKPNDGNDCYLDIQSGSGGTEAQDWANMLLRMYLRWGEENGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S ++YP ++D I+I+I+ S
Sbjct: 61  SATIRFGGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASAFIYPEINDDIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH+PT +VVQCQ +RSQHKNK QA+  L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+ E     E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDG+L+ F
Sbjct: 181 YELQKQNEEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGNLNKF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|330686486|gb|EGG98080.1| putative peptide chain release factor 2 [Staphylococcus epidermidis
           VCU121]
          Length = 271

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 195/264 (73%), Gaps = 3/264 (1%)

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N+   K E+++ + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+  
Sbjct: 3   NNVIEFKSEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQSG 62

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 63  FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 122

Query: 210 WVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P  D D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 123 DVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 182

Query: 269 QHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           Q KN+  A  ML++KLY+L+L+++E E+A I    + EIGWG QIRSYV  PY MVKD R
Sbjct: 183 QIKNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHR 241

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           TN E      V+DGD+  F++A L
Sbjct: 242 TNEETGKVDAVMDGDIGPFIEAYL 265


>gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
 gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
          Length = 325

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 156/323 (48%), Positives = 208/323 (64%), Gaps = 8/323 (2%)

Query: 32  DPHLWQNVIEAKML---MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +P  W + I A+     + E +H  N    + E+QD +    ILL+   E  D S+  E 
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKHTYNTFHKMDELQDEVE---ILLDFLAE--DESVKDEL 57

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   +
Sbjct: 58  VEKLDELAQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAK 117

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S
Sbjct: 118 GFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTS 177

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+
Sbjct: 178 VEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRT 237

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT
Sbjct: 238 QYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRT 297

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           N E      V+DGDLD F+ A L
Sbjct: 298 NFEVAQVDKVMDGDLDGFIDAYL 320


>gi|242242124|ref|ZP_04796569.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
 gi|242234437|gb|EES36749.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
          Length = 332

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 161/322 (50%), Positives = 222/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ +   L + +S   ++ + + D     EL  EE D  + +E  + 
Sbjct: 3   DPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELEEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDWA MLLRMY R+ E+  FK
Sbjct: 63  VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWAGMLLRMYQRYCEQNGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++E E+A I    + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DG++  F++A L
Sbjct: 302 EETGKVDAVMDGEIGPFIEAYL 323


>gi|301335943|ref|ZP_07224187.1| peptide chain release factor 2 [Chlamydia trachomatis L2tet1]
          Length = 334

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 159/323 (49%), Positives = 210/323 (65%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V  A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 10  FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 65

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  M+LRMY RWA    +
Sbjct: 66  EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 125

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 126 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 186 VFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328


>gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           Sweden2]
          Length = 368

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 160/323 (49%), Positives = 209/323 (64%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V  A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 44  FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA    +
Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 159

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF S+ 
Sbjct: 160 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFVSVE 219

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362


>gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
 gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
          Length = 329

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 149/282 (52%), Positives = 201/282 (71%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ++LE++ E++     +E S  L+ ++  V+  + ++LL GE D N+A + +HAGAGGTE+
Sbjct: 46  MMLEISKEDNTEEYEKEISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEA 105

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW   +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRL
Sbjct: 106 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 165

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D   RRHTSF+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAV
Sbjct: 166 VRISPFDQQKRRHTSFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAV 225

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTGV VQCQ ERSQ  N+  A +ML AKL  ++ +++ E     +    +I WG 
Sbjct: 226 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 285

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV QPY +VKD RTN E +   DVLDGDLD F+ A L+
Sbjct: 286 QIRSYVFQPYTLVKDHRTNCESSQVQDVLDGDLDKFINAYLS 327


>gi|197294594|ref|YP_001799135.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
 gi|171853921|emb|CAM11884.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
          Length = 370

 Score =  305 bits (781), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 158/352 (44%), Positives = 228/352 (64%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ L  L    +   + Q L+ +N   +    W +  +A    ++   L   I+ +K +
Sbjct: 13  IAQNLRDLKEAINLSQSYQTLNQINELMQKKDFWDDPKKAVATSQKFNDLQEKINTLKHL 72

Query: 63  QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +    D +  L+L + + ++ + L+E    L    L  + K F   L+   D+N+A L  
Sbjct: 73  ETNHQDLVTFLDLESNQNNETAFLEEEIKKLIDAVLNFKIKVF---LNQPYDNNNAILIF 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GEEAGIKSATLL+KG  AYG+L
Sbjct: 130 HPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQSGEEAGIKSATLLVKGAYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVR+SP+D+N++RHTSF S  V P + + I+I++ + D + D +R+SGAGGQ
Sbjct: 190 KAEKGVHRLVRVSPFDTNAKRHTSFVSCDVLPEIKEKIKIDLRQEDLKFDFFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300
           HVNTTDSAVRITH+PTG+VV CQ ERSQ++N+ +A  ML+ KL++L + +++EE A   +
Sbjct: 250 HVNTTDSAVRITHLPTGLVVSCQNERSQNQNREKALQMLKIKLFQLADKKQKEEHAKNFQ 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             + EIGWG QIRSYV  PY+MVKD RTN E      V+DG++D F+   L 
Sbjct: 310 GEQKEIGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDVFINGYLT 361


>gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
 gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
          Length = 325

 Score =  305 bits (781), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        E+Q+   +  + LE+ L+EDD S+  E  ++
Sbjct: 3   EPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEM-LDEDD-SVQAELEES 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + FK
Sbjct: 61  LEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSFSS+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RT  E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD+D F+ A L
Sbjct: 301 IAQVDKVMDGDIDGFIDAYL 320


>gi|313207347|ref|YP_004046524.1| bacterial peptide chain release factor 2 (brf-2) [Riemerella
           anatipestifer DSM 15868]
 gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella
           anatipestifer DSM 15868]
 gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
 gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
          Length = 376

 Score =  305 bits (781), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 223/323 (69%), Gaps = 2/323 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT  P  W N  EA++ +++ +     +   +EI   L D  +L+E A E+ D +  QE 
Sbjct: 42  KTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEEIHTGLEDLQVLIEFAKEDPDSA--QEL 99

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                 +  +VE  +F+++LS E D   A L++ AGAGGTES DWA+ML+RMY  WA+K 
Sbjct: 100 ETAYPTLLEKVENLEFKNMLSNEGDELSAVLQITAGAGGTESCDWASMLMRMYLMWADKN 159

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K + L   +G+ AG+K+ TL I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S
Sbjct: 160 GYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFAS 219

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+VDDSIEI I+ +D   +T RASGAGGQ+VN  ++AVR+ H PTG++++  + RS
Sbjct: 220 VYVYPLVDDSIEININPADISFETMRASGAGGQNVNKVETAVRLRHAPTGIIIENSESRS 279

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A  +L+++LYE+EL++R    N  E++K +I WG QIR+YV+ PY++VKD+R+
Sbjct: 280 QLQNKEKALQLLKSRLYEIELEERMRARNEIEANKMKIEWGSQIRNYVMHPYKLVKDVRS 339

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
             E +    V++G++  F+KA L
Sbjct: 340 GHETSDVDAVMNGEITPFLKAYL 362


>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 316

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 154/297 (51%), Positives = 210/297 (70%), Gaps = 10/297 (3%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++++  D L+L + A +  D S  +E S   DNL++I    +      +L+G+ D+N+A 
Sbjct: 24  VKNKFEDILVLFDFASQ--DSSFEEELSKETDNLEKI---TDSLSISIMLNGQYDANNAI 78

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L VH+G GG ++QDW  MLLRMYTR+A    FK   +++   +++G+KSATL I G NAY
Sbjct: 79  LSVHSGTGGLDAQDWTQMLLRMYTRFASNMGFKISYIDLQQDDQSGVKSATLKIDGENAY 138

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E+GVHRLVRISP+DS+ +RHTSF+S+ V P +DDSI++EI+  D ++DTYR+SGA
Sbjct: 139 GYLKCEKGVHRLVRISPFDSSGKRHTSFASVDVLPELDDSIKVEINPKDLKVDTYRSSGA 198

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIAN 297
           GGQHVN T+SA+RITHIPTGVVVQCQ ERSQ  N+  A  ML AKL EL EL+ +++I +
Sbjct: 199 GGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKMLTAKLIELKELEHKDKIED 258

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I +   ++I WG QIRSYV QPY MVKD RTN E  +   V+DGD+  F+ A L  K
Sbjct: 259 I-QGKYSQIAWGSQIRSYVFQPYTMVKDHRTNYEVGNIGSVMDGDIMPFINAYLVNK 314


>gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           KF147]
 gi|24638157|sp|Q9CGX1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp.
           lactis KF147]
 gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 365

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 148/348 (42%), Positives = 221/348 (63%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + ++N      D +   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  AEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  NMLEEAQTMLEMLQEEADEEMQAELEEMTIALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  L   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+++ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVDVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG+LD F+ A L
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYL 361


>gi|255348832|ref|ZP_05380839.1| peptide chain release factor 2 [Chlamydia trachomatis 70]
 gi|255503372|ref|ZP_05381762.1| peptide chain release factor 2 [Chlamydia trachomatis 70s]
 gi|255507050|ref|ZP_05382689.1| peptide chain release factor 2 [Chlamydia trachomatis D(s)2923]
 gi|296435060|gb|ADH17238.1| peptide chain release factor 2 [Chlamydia trachomatis E/150]
 gi|296438780|gb|ADH20933.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023]
          Length = 334

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 160/323 (49%), Positives = 209/323 (64%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V  A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 10  FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 65

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA    +
Sbjct: 66  EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF S+ 
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFVSVE 185

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 186 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328


>gi|329767964|ref|ZP_08259475.1| peptide chain release factor 2 [Gemella haemolysans M341]
 gi|328838449|gb|EGF88057.1| peptide chain release factor 2 [Gemella haemolysans M341]
          Length = 372

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 160/333 (48%), Positives = 219/333 (65%), Gaps = 3/333 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR++ +     +   W +   A +L+ E + +   +    E+ D L  +  ++E   +ED
Sbjct: 31  QRVAEIENMMLEADFWNDSETASLLVTESKSIKKELDEFSEMIDYLEHSEEMVEFLKDED 90

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  I Q+  + +  +K  VE   F  L S E D+N A LE+HAGAGGT++ DW+ ++LRM
Sbjct: 91  DEEIYQDLLETVVNLKSSVEDFSFRLLFSEEYDNNTAILEIHAGAGGTDATDWSELMLRM 150

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+  K+  K   L    G+  G+KSAT+ ++G  AYG LKGE+GVHR+VRISP+D + 
Sbjct: 151 YERFFTKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLLKGEKGVHRVVRISPFDPSG 210

Query: 201 RRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           +RHTSF+SI V P   DD I IEI+  D +IDTYRA GAGGQH+NTTDSAVRITH+PTG+
Sbjct: 211 KRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGGQHINTTDSAVRITHLPTGI 270

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQ 318
           VVQ Q ERSQ KNK  A   L++KLY+LE++++E E+A I    K +IGWG QIRSYV  
Sbjct: 271 VVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKERELAAIRGEQK-DIGWGSQIRSYVFT 329

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 330 PYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
 gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
          Length = 364

 Score =  305 bits (780), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 159/350 (45%), Positives = 220/350 (62%), Gaps = 6/350 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  +  + D D    R   L  +  DP LW +   A+ +  E   +   +  ++ +
Sbjct: 12  LEQTLTTIEKVMDLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA EE D ++ +   D L  +   VE  +  ++LSGE D  +A + + 
Sbjct: 72  RQRIDDLPVMYELAAEEGDYTLAE---DELADLTTAVETLEVTTMLSGEYDQREAVVNIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I +S+ RID YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIPDSEIRIDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVRITH PTG+VV CQ E+SQ +NKA A N+L++KL  LE +++EE A +    
Sbjct: 249 VNTTDSAVRITHEPTGIVVTCQNEKSQIQNKASAMNVLQSKL--LERKRQEEKAELDALG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +     WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D F+++ +
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGI 356


>gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
 gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
          Length = 324

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 149/282 (52%), Positives = 201/282 (71%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ++LE++ E++     +E S  L+ ++  V+  + ++LL GE D N+A + +HAGAGGTE+
Sbjct: 41  MMLEISKEDNTEEYEKEISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEA 100

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW   +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRL
Sbjct: 101 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 160

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D   RRHTSF+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAV
Sbjct: 161 VRISPFDQQKRRHTSFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAV 220

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTGV VQCQ ERSQ  N+  A +ML AKL  ++ +++ E     +    +I WG 
Sbjct: 221 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 280

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV QPY +VKD RTN E +   DVLDGDLD F+ A L+
Sbjct: 281 QIRSYVFQPYTLVKDHRTNCESSQVQDVLDGDLDKFINAYLS 322


>gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440]
 gi|189040004|sp|A4X3K6|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora
           tropica CNB-440]
          Length = 373

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 156/324 (48%), Positives = 213/324 (65%), Gaps = 3/324 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P LW +   A+ +  +  +++  I+ + E++ RL D  +LLELA  E D   L E    +
Sbjct: 43  PDLWDDQARAQQVTSQLSYVNGEINKLAELRSRLDDAKVLLELAEAESDPGALTEVEAEV 102

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             +   ++  +  +LLSGE DS +A + + AGAGG ++ D+A MLLRMY RWAE+  + T
Sbjct: 103 AGLAKAIDEMEVRTLLSGEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPT 162

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E  E    EEAG+KSAT  +K P AYG L  E G HRLVRISP+D+  RR TSF+ + V 
Sbjct: 163 EVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVL 222

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           PVV+ +  I+I E++ R D YR+SG GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +N
Sbjct: 223 PVVEQTDHIDIPENEMRFDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQN 282

Query: 273 KAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           KA A  +L+A+L  LE +++EE A + G  +     WG Q+RSYVL PYQMVKDLRT  E
Sbjct: 283 KASALRVLQARL--LERKRQEEQAKLQGLKTDAAGSWGDQMRSYVLHPYQMVKDLRTEQE 340

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +P+ V DG+LD F++A +  +K
Sbjct: 341 TGTPAAVFDGELDAFIEAGIRWRK 364


>gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
 gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
          Length = 248

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 143/245 (58%), Positives = 192/245 (78%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +  AD ++ ++++ AGAGGTE+ DWA+MLLR Y ++ EK+ FK E +E  +G+ AGI+
Sbjct: 1   MFANPADPSNCFIDIQAGAGGTEACDWASMLLRQYLKYCEKKGFKAEVMEETEGDVAGIR 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I+G  A+G L+ E GVHRLVR SP+DS   RHTSF+S++VYP VDDSIEIEI+ +
Sbjct: 61  SATLKIEGDYAFGHLRTETGVHRLVRKSPFDSAGGRHTSFASLFVYPEVDDSIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLR++LYE
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWAMLRSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++K+ E     E SKT++GWG QIRSYVL   + +KDLRT +E ++   VLDGDLD F
Sbjct: 181 HEMRKQMEAQQKLEDSKTDVGWGHQIRSYVLDQSR-IKDLRTGVEISNTQKVLDGDLDPF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
 gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
          Length = 325

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+  E  + 
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELVEQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|189499218|ref|YP_001958688.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
 gi|189494659|gb|ACE03207.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
          Length = 363

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 156/347 (44%), Positives = 229/347 (65%), Gaps = 3/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKEIQDR 65
           LN  GG+FD D  + ++  L   T + + W+N  EA  +++E   H      F+  ++ +
Sbjct: 15  LNSYGGIFDVDERLHKIGELEQITTEENFWENQQEANKIVKEINDHKLWTEGFLA-LEKQ 73

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             D    LE+A E  + S+ +E    +  I+ ++   +F+++LSG+ D  +A L ++AGA
Sbjct: 74  TADLREELEIAEELGEESLAEEIDSRIGSIEQKIAEIEFKNMLSGKDDPGNALLTINAGA 133

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E 
Sbjct: 134 GGTEAQDWAEMLYRMYLRWAERKGFKIFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAEN 193

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SP+DSN+RRHTSF+S++ YP      EIEI + D  + T+R+ G GGQ+VN 
Sbjct: 194 GVHRLVRVSPFDSNARRHTSFASVYSYPEAPPDAEIEIRKEDLELSTFRSGGKGGQNVNK 253

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++AVRI HIP+G+VV CQQERSQ +N+ +A  MLRA+LY+ + ++ E      E +K +
Sbjct: 254 VETAVRIKHIPSGIVVSCQQERSQFQNRERATKMLRAQLYKKQREEEEARKQAVEGTKKK 313

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           I WG QIRSYV+   + +KD RTN E+    +VLDGD+DDF++  L+
Sbjct: 314 IEWGSQIRSYVMDD-RRIKDHRTNYERHDIENVLDGDIDDFIEKYLS 359


>gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 327

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 210/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +++   +  + +E+ LEED+ S+  E  ++
Sbjct: 3   EPDFWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETELYMEM-LEEDE-SVKGELEES 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + FK
Sbjct: 61  LLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E  K+ E  N  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD+D F+ A L
Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320


>gi|294102045|ref|YP_003553903.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
 gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
          Length = 368

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/334 (47%), Positives = 215/334 (64%), Gaps = 1/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           ++  L  KT  P  W +  EA+ + +E     + +   K+I +   D  I+ E+  EE+D
Sbjct: 32  KIQELEEKTLKPDFWGSD-EARKVTQELARYQDKLDSWKKIAEDYEDLEIIEEMLKEEED 90

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + ++       +K E+E +Q   LLS + D  +A + VHAG+GG +SQDWA ML RMY
Sbjct: 91  RELQKDFEQKAFSLKKEIERQQLIELLSEDYDQGNAIVSVHAGSGGLDSQDWAEMLYRMY 150

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW E+  F+ + L++    E GI + TLL++G  AYG+LK E+GVHRLVRISP+DS  R
Sbjct: 151 ARWMEQNDFRVKVLDLIKDSEGGISNVTLLVEGSYAYGYLKSEKGVHRLVRISPFDSAGR 210

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ + P + +  +IEI   D RIDTYR+SGAGGQHVN TDSAVRITH P+G+VV
Sbjct: 211 RHTSFASVDIVPELPEDEDIEIRTEDLRIDTYRSSGAGGQHVNMTDSAVRITHFPSGIVV 270

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQH NKA A  +L++KLYE  +++R    +     K EI WG QIRSYVL PY 
Sbjct: 271 SCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIGEKKEISWGSQIRSYVLHPYT 330

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +VKD RT  E  +   VLDGD+DDF+ A L  KK
Sbjct: 331 LVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWKK 364


>gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564]
 gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564]
          Length = 325

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ +E    
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQEELVAQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LAELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300]
 gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300]
          Length = 329

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 153/326 (46%), Positives = 209/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+ KLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324


>gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316]
 gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316]
 gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
           13813]
          Length = 337

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 216/331 (65%), Gaps = 2/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + ++ L  +  +P  W + I A+   +E   L         +Q+   +  +LLE+ L+ED
Sbjct: 3   EEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRM
Sbjct: 62  D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V
Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY
Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN E      V+DG+++ F+ A L
Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331


>gi|24216466|ref|NP_713947.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798086|sp|Q8EZT4|RF2_LEPIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|24197768|gb|AAN50965.1| peptidyl-tRNA hydrolase involved in peptide chain release
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 367

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 164/330 (49%), Positives = 224/330 (67%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L  K EDP+LW N  EA+++ +++  L+  ++    IQ  + D   L++L L+E  
Sbjct: 35  RLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFTIQQDILDFPDLVDLTLDEKG 94

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            + + E S    R++ + E  +    L    D   A+L +H GAGGTESQDWA MLLRMY
Sbjct: 95  ENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNIHPGAGGTESQDWAEMLLRMY 154

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+ EK+ ++   +++  G+ AGIK+ATL + G  A+G+LKGE GVHRLVRISP+D+N R
Sbjct: 155 TRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFLKGENGVHRLVRISPFDANKR 214

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQHVNTTDSAVRITH+P+G+VV
Sbjct: 215 RHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHMPSGIVV 274

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+  A+ ML+A+LYELE +K +E        K +I WG QIRSYV  PY 
Sbjct: 275 ACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSGEKKDIAWGSQIRSYVFHPYN 334

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +VKD RT+ E  + + V+DGD++ F+ A L
Sbjct: 335 LVKDHRTDHETGNVAAVMDGDIEPFILAYL 364


>gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 373

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/335 (44%), Positives = 215/335 (64%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D + +R+  L      P  + +   +K +  E   L   +S  +++Q    D   +LE+ 
Sbjct: 28  DASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQGLYDDAETMLEML 87

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE D +++ E  +++  +   V+  Q  ++L+GE D ++A L  HAG GGTE+QDWA M
Sbjct: 88  DEEYDPAMIPEAEESVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEM 147

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY +WA       E L+  DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+
Sbjct: 148 LYRMYNKWASNHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRVSPF 207

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           D+N+RR TSF+S+ V P +D++I+++IS  D  +  YR+SGAGGQH+N T SAVR+ H P
Sbjct: 208 DANARRQTSFASLEVMPELDNTIQVDISPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKP 267

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TGVVV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + EI WG QIRSYV
Sbjct: 268 TGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYV 327

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             PY MVKD RTN E  +   V+DGDLD F+ A L
Sbjct: 328 FMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYL 362


>gi|239981919|ref|ZP_04704443.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 355

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 159/351 (45%), Positives = 222/351 (63%), Gaps = 5/351 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + ++ RL
Sbjct: 1   MESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  EDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ K + 
Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DALKGDG 297

Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 298 GNSWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 348


>gi|7404432|sp|O51101|RF2_BORBU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 359

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/344 (45%), Positives = 225/344 (65%), Gaps = 14/344 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ D   L
Sbjct: 19  LFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKDLSDL 78

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAGG 127
            E+A  E D + L+   + L+        KQ++ LL+      E D+N+A+L +H+GAGG
Sbjct: 79  CEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 131 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 190 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 249

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 250 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 309

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 310 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 353


>gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
 gi|71153101|sp|Q8CPZ1|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153102|sp|Q5HQX5|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
          Length = 371

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 163/348 (46%), Positives = 229/348 (65%), Gaps = 3/348 (0%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
            LN + G  D +N    +        DP  W +  +A+ ++ +   L + ++   ++ + 
Sbjct: 16  HLNQIRGSLDLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNA 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D     EL  EE D  +  E  + +Q+ + +++  + + LL G  D+N+A LE+H GA
Sbjct: 76  VDDMSATRELLQEEYDEDMKIELEEEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGA 135

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDW +MLLRMY R+ E+  FK E ++   G+EAG+KS TLLIKG NAYG+LK E+
Sbjct: 136 GGTESQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEK 195

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N
Sbjct: 196 GVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHIN 255

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSK 303
            T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML++KLY+L+L+++E E+A I    +
Sbjct: 256 KTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IGWG QIRSYV  PY M+KD RTN E      V+DG++  F++A L
Sbjct: 315 KDIGWGSQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYL 362


>gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974]
 gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
 gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
          Length = 329

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 154/326 (47%), Positives = 209/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324


>gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
 gi|166225116|sp|A2RFN2|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
          Length = 365

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 153/338 (45%), Positives = 217/338 (64%), Gaps = 2/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D   + ++ L     +P  W + I A+   +E   L         +Q+   +  +LL
Sbjct: 24  LDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLL 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ L+EDD S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW
Sbjct: 84  EM-LDEDD-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDW 141

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
            ++LLRMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRI
Sbjct: 142 GDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRI 201

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DS  RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+T
Sbjct: 202 SPFDSAKRRHTSFASVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLT 261

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIR
Sbjct: 262 HIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYV  PY MVKD RTN E      V+DG+++ F+ A L
Sbjct: 322 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYL 359


>gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 368

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/351 (47%), Positives = 225/351 (64%), Gaps = 5/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  +  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRSRIEKLEHEASDPQLWDDQSNAQRVTSQLSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA EED    L E    L+ ++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLPVLYELAAEEDAADALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYLRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVVD +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVDTTDHIDIPEGDVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-DAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 KGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 359


>gi|255535765|ref|YP_003096136.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341961|gb|ACU08074.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
          Length = 370

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 223/323 (69%), Gaps = 2/323 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT  P  W    +A++ M++ +     ++  +EI  RL D  +L+E A E+ D    +E 
Sbjct: 36  KTLSPEFWDKPKDAEIFMKQLRSKKKWVTDYEEIFSRLEDIQVLMEFAKEDPDSE--KEL 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +    +  ++E  +F+++LS E D   A L++ AGAGGTES DWA+ML+RMYT WAEK+
Sbjct: 94  DEAFPVLLEKIEDLEFKNMLSNEGDELSAVLQITAGAGGTESCDWASMLMRMYTMWAEKQ 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K   L   +G+ AGIK+ TL I G  A+G+L+GE GVHRLVRISP+DSN++RHTSF S
Sbjct: 154 GYKLRELNYQEGDVAGIKTVTLEIDGEFAFGYLRGENGVHRLVRISPFDSNAKRHTSFVS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+VDD+IEI I+ +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RS
Sbjct: 214 VYVYPLVDDTIEININPADISFETMRSSGAGGQNVNKVETAVRLRHAPTGIIIENSESRS 273

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A  +LR++LYE+EL++R +  N  E+ K +I WG QIR+YV+ PY++VKD+R+
Sbjct: 274 QLQNKEKAMQLLRSRLYEMELEERMKARNEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRS 333

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
             E +    V++G+L  F+KA L
Sbjct: 334 GHETSDVDAVMNGELTPFLKAFL 356


>gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204]
 gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204]
          Length = 350

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 159/348 (45%), Positives = 226/348 (64%), Gaps = 12/348 (3%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +  LFD +   +RL+  N    +   W +  +A+ ++RE     N +  + E    L D+
Sbjct: 1   MATLFDLEGKEKRLAENNALMAEADFWNDQKKAQKIIRE----SNQLKVLIETHHSLTDS 56

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEV--EYKQFE--SLLSGEADSNDAYLEVHAGA 125
              L   + E   S  ++ ++ +     E   ++++FE   LLSG  D++++ LE+H GA
Sbjct: 57  FAELSEGIGELSSSFDEDMNELISEEYTETMKKFEEFEIQVLLSGPYDNHNSILEIHPGA 116

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+ DWA ML RMY RWAE++ FK E ++  +GEEAG+KS ++LI+GP AYG+LK E 
Sbjct: 117 GGTEAMDWAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAEN 176

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DSN+RRHTSF+S+ + P  +D +EIEI + D  I T RASGAGGQH+N 
Sbjct: 177 GVHRLVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIDDKDLDIITMRASGAGGQHINK 236

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GESSK 303
           TDSAVR+THIP+G+ V CQ +RSQ +N+    NML++KL +L++++ EE A    GE   
Sbjct: 237 TDSAVRMTHIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKA 296

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E  WG QIRSYV  PY MVKDLRT  E  +   V+DG++D F+ + L
Sbjct: 297 NE--WGSQIRSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYL 342


>gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
 gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
          Length = 369

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/349 (44%), Positives = 219/349 (62%), Gaps = 4/349 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   + +  L+     P LW +   A+ +     H    +  IK++
Sbjct: 12  LDTTLTSIEKVMDVDRLARSIDELSEAASAPDLWNDQENAQKVTSRLSHAQAELKRIKDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L EL  E+ D  +  E    L  ++ E++ ++  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLEVLFELGDEDPDTYL--EAQQELLGLQKEIDAQEVRTLLSGEYDEREALVTIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A ML+RMY RW+E+  + TE  +    EEAGIKS T  +K P AYG L 
Sbjct: 130 SEAGGVDAADFAEMLMRMYLRWSERHGYNTEVYDTSYAEEAGIKSTTFQVKAPYAYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +++ E D R+D YR+SG GGQ 
Sbjct: 190 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVETSDHVDVDEKDLRVDVYRSSGPGGQG 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L++KL  LE +++EE A +    
Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVLQSKL--LERRRQEERAVMDALK 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            T   WG Q+RSYVL PYQMVKDLRTN E  +PS V DG++DDF++A +
Sbjct: 308 DTGNSWGNQMRSYVLHPYQMVKDLRTNFEVGNPSAVFDGEIDDFIEAGI 356


>gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
 gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
          Length = 337

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  +  +P  W + I A+   +E   L         +Q+   +  + LE+ LEEDD 
Sbjct: 5   IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEM-LEEDDS 63

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
              +      +  K+   Y +   LLS   D N+A LE+H G+GGTE+QDWA+MLLRMY 
Sbjct: 64  VQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLLRMYQ 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RR
Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT  E      V+DGD++ F+ A L
Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331


>gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
 gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
          Length = 351

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 164/350 (46%), Positives = 232/350 (66%), Gaps = 17/350 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCD 68
           +FD  +    L  L  + E+P +W +   A+ LM+     R+ ++    F+K  QD L  
Sbjct: 6   IFDLSSREMLLEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGL-- 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
                ELA E +D S+ ++    +  ++ E++ ++  +LLSG  D  +A L ++AGAGGT
Sbjct: 64  -----ELA-ESEDESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGT 117

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           +SQDWA+ML+RMY RW E+R F +E L+  +GEEAGIKS T+ + GP AYG+L+GE+GVH
Sbjct: 118 DSQDWASMLMRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVH 177

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTD 247
           RLVR+SP+D+  RRHTSF+ + V P + +   EI+I+  D RID YR+S AGGQ+V    
Sbjct: 178 RLVRLSPFDAAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNA 237

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTE 305
           +AVRITHIPTG+VV CQ ERSQ +N+  A  +LRA+L EL+ Q++E ++A + GE  K E
Sbjct: 238 TAVRITHIPTGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAE 297

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             WG QIRSYVL PYQ+VKD RT  E  +   VLDG+LD F++A L  +K
Sbjct: 298 --WGSQIRSYVLHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQK 345


>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
 gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
          Length = 368

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/355 (45%), Positives = 226/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELASVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE++ +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  L+ +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LDRRRQEEQARM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G+++ F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364


>gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
 gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
          Length = 346

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 161/345 (46%), Positives = 230/345 (66%), Gaps = 14/345 (4%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNL 70
           FD  +  +++   + +T +P  WQ+  +A+ ++R +  L + +   +E+    + L D  
Sbjct: 4   FDLSSKNKQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLNDTA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGT 128
             L+   +E+   I +E     + + ++ +++ FE   LLS E D N+A LE+H GAGGT
Sbjct: 64  DELKSEFDEELMMIAEE-----EYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGT 118

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES DWA+ML RMYTR+AEK  FK   L+   G+EAGIKS T L++G  AYG+LK E+GVH
Sbjct: 119 ESCDWASMLYRMYTRYAEKHGFKVTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEKGVH 178

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS +RRHTSF+S+ V P  +D IEI+I   D  ++T RASGAGGQH+N TDS
Sbjct: 179 RLVRISPFDSGARRHTSFASLDVMPQFNDEIEIDIKPEDLIVETKRASGAGGQHINKTDS 238

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEI 306
           AVR+ H PTG+V  CQ  RSQH+N+ +   +L+++LY+LE++++E +IA I G  S  E 
Sbjct: 239 AVRMVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANE- 297

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV+ PY +VKD+RT  E +    VLDGDLD+F+ A L
Sbjct: 298 -WGSQIRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYL 341


>gi|239930935|ref|ZP_04687888.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 352

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 160/351 (45%), Positives = 222/351 (63%), Gaps = 5/351 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + ++ R+
Sbjct: 1   MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL  LE +++EE A + ++ K + 
Sbjct: 241 DSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKL--LERRRQEEQAKM-DALKGDG 297

Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 298 GNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 348


>gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
 gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
          Length = 370

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/351 (44%), Positives = 220/351 (62%), Gaps = 6/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 14  QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE   S+  E   +L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 74  LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWA K   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVR+SP+D+  RR TSF+ + V PVV+ +  I++ +++ R+D YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G 
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +
Sbjct: 311 GGNA--SWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGI 359


>gi|14195074|sp|P58105|RF2_CHLMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/343 (47%), Positives = 213/343 (62%), Gaps = 5/343 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +     L  L   +     W +V  A  +  +   L   +    E+++++      
Sbjct: 23  LFDPEEKETELKNLEQLSIQDSFWDDVSRAGRISEKIARLKQQLLEYNELKNKINSIKFF 82

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           LE      D  I +E       I  E +  ++E+L  L+GE D N  +L ++AGAGGTES
Sbjct: 83  LEDEESSKDLEIQKELEKEF--IFCEKKIAEWETLRLLAGELDRNSCFLSINAGAGGTES 140

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  ML RMY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRL
Sbjct: 141 CDWVEMLFRMYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRL 200

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 201 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 260

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K EI WG 
Sbjct: 261 RITHFPTGIVVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGS 320

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA LA
Sbjct: 321 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 363


>gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232]
 gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394]
 gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180]
 gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429]
 gi|94990034|ref|YP_598134.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10270]
 gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096]
 gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750]
 gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
 gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS8232]
 gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes
           MGAS10394]
 gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS6180]
 gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus
           pyogenes MGAS9429]
 gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10270]
 gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS2096]
 gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10750]
 gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
          Length = 337

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 215/331 (64%), Gaps = 2/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+ L+ED
Sbjct: 3   EEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRM
Sbjct: 62  D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V
Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY
Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN E      V+DG+++ F+ A L
Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331


>gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7]
 gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7]
          Length = 364

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 155/350 (44%), Positives = 214/350 (61%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L    G  D +   + ++ L  K  +P  W + + A+   +E   L N      +
Sbjct: 12  ELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNTYGNFHQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D   ++ ILL+   E  D S+  E  + L  +   +   +   LLS   D N+A LE+
Sbjct: 72  MLDLYDESEILLDFLAE--DESVRDELVEKLVELDKTMTAYEMTLLLSEPYDHNNAILEI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTE+QDW  MLLRMY R+   + F  E L+   G+EAGIKS TL   GPNAYG L
Sbjct: 130 HPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IEIEI + + ++DT+R+ GAGGQ
Sbjct: 190 KSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+THIPTG+V Q   +R+Q+ N+ +A  +L+AKLY+LE +K+    +  + 
Sbjct: 250 NVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K EI WG QIRSYV  PY MVKD RT  E      V+DGDLD F+ A L
Sbjct: 310 DKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYL 359


>gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6]
 gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6]
          Length = 325

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ +E    
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELVTQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
 gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
          Length = 367

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/351 (44%), Positives = 220/351 (62%), Gaps = 6/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE   S+  E   +L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWA K   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVR+SP+D+  RR TSF+ + V PVV+ +  I++ +++ R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G 
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +
Sbjct: 308 GGNA--SWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGI 356


>gi|45656368|ref|YP_000454.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798054|sp|Q72V33|RF2_LEPIC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|45599602|gb|AAS69091.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 367

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/330 (49%), Positives = 224/330 (67%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L  K EDP+LW N  EA+++ +++  L+  ++    IQ  + D   L++L L+E  
Sbjct: 35  RLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFTIQQDILDFPDLVDLTLDEKG 94

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            + + E S    R++ + E  +    L    D   A+L +H GAGGTESQDWA MLLRMY
Sbjct: 95  ENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNIHPGAGGTESQDWAEMLLRMY 154

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+ EK+ ++   +++  G+ AGIK+ATL + G  A+G+LKGE GVHRLVRISP+D+N R
Sbjct: 155 TRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFLKGENGVHRLVRISPFDANKR 214

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQHVNTTDSAVRITH+P+G+VV
Sbjct: 215 RHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHMPSGIVV 274

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ KN+  A+ ML+A+LYELE +K +E        K +I WG QIRSYV  PY 
Sbjct: 275 ACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSGEKKDITWGSQIRSYVFHPYN 334

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +VKD RT+ E  + + V+DGD++ F+ A L
Sbjct: 335 LVKDHRTDHETGNVAAVMDGDIEPFILAYL 364


>gi|326692249|ref|ZP_08229254.1| peptide chain release factor 2 [Leuconostoc argentinum KCTC 3773]
          Length = 333

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 213/320 (66%), Gaps = 5/320 (1%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQ 93
            W + ++A+ ++ E   L N       + ++  +  +L+E+  E+ +D     E + +++
Sbjct: 6   FWDDNVKAQKVIEENNILKNRRDSFLNLTNQAEEIAVLIEMLSEDPEDEDTAAELAASVE 65

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           +++ +VE    E LL+   D+N+A LEVH G+GGTES DW   L RMYTRWA++  F+ E
Sbjct: 66  KVQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTRWAQQHGFQVE 125

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L+ H G+EAGI SAT+ I G NAYG+L+ E+GVHR VRISP+DS  RRHTSF S+ V P
Sbjct: 126 VLDYHAGDEAGIDSATIKISGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMP 185

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +DD+IE+E+ + D ++D +R+ GAGGQ+VN   + VR+TH PTG+VV    ER+Q+ N+
Sbjct: 186 ELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNR 245

Query: 274 AQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
             A  +L+ KLY+LEL+K+  E  A  GE  K E GWG QIRSYVL PYQMVKD RTN E
Sbjct: 246 DYAMRLLKGKLYQLELEKQAAERAALTGE--KMENGWGSQIRSYVLHPYQMVKDHRTNYE 303

Query: 332 KTSPSDVLDGDLDDFMKATL 351
              P  VLDGDLD F+ A L
Sbjct: 304 TNQPQQVLDGDLDPFINAYL 323


>gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
 gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
          Length = 325

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 155/321 (48%), Positives = 208/321 (64%), Gaps = 4/321 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90
           +P  W + I A+   +E   L N  +   ++ D L D + ILL+   E  D S+  E  +
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFHKM-DELQDEVEILLDFLAE--DESVKDELVE 59

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + F
Sbjct: 60  KLSELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGF 119

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ 
Sbjct: 120 KVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVE 179

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +DD+IE++I E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+
Sbjct: 180 VMPELDDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQY 239

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RTN 
Sbjct: 240 GNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTNF 299

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E      V+DGDLD F+ A L
Sbjct: 300 EVAQVDKVMDGDLDGFIDAYL 320


>gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c]
 gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c]
          Length = 367

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/347 (44%), Positives = 223/347 (64%), Gaps = 4/347 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R + L  +  DP LW +   A+++ R+   +   IS ++ +
Sbjct: 12  LDSTLTGIETVLDVEGLRRRAADLEQEASDPDLWSDQDRAQVVTRKLSSVRGDISRVEGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +DRL DN I+    LE+DD  ++ E +  L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 72  RDRL-DN-IMTAFELEDDD--LISEATGQLPTLARDISTLEVRTLLSGEYDERDAIVQLS 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT L+K P AYG L+
Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYSTEVYDSSEAEEAGLKSATFLVKAPYAYGTLR 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + + PVV+ S  ++I + D R+D +R+SG GGQ 
Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEITPVVELSDHVDIDDKDLRVDIFRSSGPGGQG 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 248 VNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQAKLLERRRAEEAAEKQRLTGG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             ++ +G QIR+YVL PYQMVKDLRT +E ++   VLDG++DDF+ A
Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGGVLDGEIDDFIDA 354


>gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200]
 gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200]
          Length = 329

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 154/326 (47%), Positives = 208/326 (63%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E  K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324


>gi|325109320|ref|YP_004270388.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
 gi|324969588|gb|ADY60366.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
          Length = 373

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 161/341 (47%), Positives = 225/341 (65%), Gaps = 4/341 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D   +++  +N +   P  W N  +A+  M E + L + ++ ++E+     D  +LL
Sbjct: 23  LDYDVKCEQVKEINDRMAQPGFWDNQEKAQETMAELRRLKSLVTPLEELVQGRDDLEVLL 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E A  +D    +QE +    R+   V+  +F+ LL    D+ +AY+ + AG GGT++ DW
Sbjct: 83  EFAEADDSEETVQEITSTCDRLGSIVDKVEFQLLLGQPEDALNAYVTIQAGEGGTDAADW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAEK +  TE LE  D EEAGI+ ATLLIKG  A+G+LKGE G HRLVR+
Sbjct: 143 AEMLLRMYIRWAEKEEMATELLERTDAEEAGIRHATLLIKGDYAFGYLKGESGNHRLVRM 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP++S  +R T+F+++ V P VDDS EI+I  ++D   DT RA GAGGQHVN T+SAVR+
Sbjct: 203 SPFNSAGKRQTAFAAVDVTPEVDDSFEIDIDWDNDVDEDTMRAGGAGGQHVNKTESAVRL 262

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--IANIGESSKTEIGWGR 310
           TH  +G+VV+CQ ERSQH+N+A A  ML AKLY++E++KRE    A  GE SK   G G 
Sbjct: 263 THKESGLVVRCQNERSQHQNRASARKMLTAKLYQMEIEKRESENAARRGEKSKIGFG-GE 321

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IR+YVLQP Q VKD R+ ++  +P  VL+G+LD F++A L
Sbjct: 322 TIRNYVLQPEQFVKDTRSELKTANPLTVLEGELDPFLEAYL 362


>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 372

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/350 (45%), Positives = 222/350 (63%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D +    +++ L  ++ DP LW +   A+ + R+   L++ ++ I  I
Sbjct: 13  LAATLASVSAVLDLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             RL D  +L ELA  EDD     E    L +++ E+   +  +LL+G  D  +A + ++
Sbjct: 73  GQRLDDLGVLYELAEAEDDADTRVEADRELDQLRKEIGELEVRTLLNGPHDEREAIVTIN 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ DWA ML RMY RWAE+  + T+  E    EEAGIKS +  +K P AYG L+
Sbjct: 133 SQAGGVDAADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE G HRLVRISP+D+ +RR TSF+ + V PVV+ S  IEI + D R+D YR+SG GGQ 
Sbjct: 193 GEHGTHRLVRISPFDNQNRRQTSFAGVDVVPVVEQSDHIEIDDGDLRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +ML+AKL  L  ++ EE A + E  
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKL--LARKREEEQAALDEIR 310

Query: 303 KTEI-GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG Q+R+YVL PYQ VKD+RT  E  + S VLDGD+D+F+ A +
Sbjct: 311 GDSVSSWGTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEI 360


>gi|296435987|gb|ADH18161.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768]
 gi|296437848|gb|ADH20009.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074]
 gi|297140348|gb|ADH97106.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301]
          Length = 334

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/323 (48%), Positives = 210/323 (65%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V+ A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 10  FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 65

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA    +
Sbjct: 66  EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ 
Sbjct: 186 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NML A++Y+  LQ+R E  NI   +K E+ WG QIR+YV QPY +VKD+RT  
Sbjct: 246 QNREACMNMLCARIYQKLLQERLEKQNIDRKNKKEVSWGSQIRNYVFQPYTLVKDVRTGY 305

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328


>gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes M1 GAS]
 gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005]
 gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1
           GAS]
 gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS5005]
          Length = 337

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 215/331 (64%), Gaps = 2/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+ L+ED
Sbjct: 3   EEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRM
Sbjct: 62  D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V
Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY
Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN E      V+DG+++ F+ A L
Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331


>gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 332

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 157/320 (49%), Positives = 201/320 (62%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T D 
Sbjct: 3   EPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTEDQ 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R  K
Sbjct: 63  LAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRGLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E      G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ +
Sbjct: 183 IPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQFQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT  E
Sbjct: 243 NRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTGYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG LD F+ A L
Sbjct: 303 TADVGGVMDGKLDPFIYAYL 322


>gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
 gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
          Length = 365

 Score =  303 bits (776), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 154/327 (47%), Positives = 222/327 (67%), Gaps = 6/327 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEEDDCSILQ 86
           KT DP  W N  EA+  M+  +     ++     +  L +  +LLE     E ++  +++
Sbjct: 36  KTFDPSFWDNPSEAEEFMKTLKGKKKWVNDYNVAKSGLEELQVLLEFYNEGEAEESDVIK 95

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +     Q+I   VE  +F+++LS E D   A L++ AGAGGTES DWA ML+RMY  WAE
Sbjct: 96  Q----YQKILDVVEELEFKNMLSEEGDDLSAVLQITAGAGGTESCDWAQMLMRMYLMWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           K+ FK + L   +G+ AGIK+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF
Sbjct: 152 KQGFKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSF 211

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S++VYP+VDD+IEIEI+ +D  I T R+SGAGGQ+VN  ++ V++ H PTG+ + C + 
Sbjct: 212 ASVYVYPLVDDTIEIEINPADIEITTARSSGAGGQNVNKVETKVQLVHHPTGIQISCSET 271

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH N+ +A  ML+++LYE+EL+K+ E     E+SK +I WG QIR+YV+ PY++VKD+
Sbjct: 272 RSQHDNRNRAMQMLKSQLYEIELEKQREQREDIEASKKKIEWGSQIRNYVMHPYKLVKDV 331

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT  E  +   V+DG +D F+KA L +
Sbjct: 332 RTAEETGNVDSVMDGHIDQFLKAYLMM 358


>gi|260063027|ref|YP_003196107.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
 gi|88784596|gb|EAR15766.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
          Length = 313

 Score =  303 bits (776), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 140/263 (53%), Positives = 195/263 (74%)

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           +L+R    +E  +F ++LS E D   A L++ AGAGGTES DWA+ML+RMY  W+EK  +
Sbjct: 44  HLKRATDAIEKLEFRNMLSDEGDDLTAVLQITAGAGGTESCDWASMLMRMYMMWSEKNGY 103

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K   L   +G+ AGIK+ TL I+GP A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++
Sbjct: 104 KVRELNYQEGDVAGIKTVTLEIEGPFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVY 163

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           VYP+ DDSIEIEI+ +D  I T R+SGAGGQ+VN  ++ V++ H PTG+ + C   RSQH
Sbjct: 164 VYPLADDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQISCSDSRSQH 223

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+A A  ML+++LYE+EL+K++E     ESSK +I WG QIR+YV+ PY++VKD+RT  
Sbjct: 224 DNRATALKMLKSQLYEIELRKKQEAREAIESSKMKIEWGSQIRNYVMHPYKLVKDVRTGE 283

Query: 331 EKTSPSDVLDGDLDDFMKATLAI 353
           E  +   V+DG+++DF+KA L +
Sbjct: 284 ETGNVDAVMDGEINDFLKAFLMM 306


>gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
 gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
          Length = 329

 Score =  303 bits (776), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 153/326 (46%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324


>gi|242066770|ref|XP_002454674.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
 gi|241934505|gb|EES07650.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
          Length = 467

 Score =  303 bits (776), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   ++R   L    E P LW++ + A  + RE+  L   I  + +++  L +++ +L
Sbjct: 118 LKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQLEQELIEHIEML 177

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            LA EE+D  +  E+   L  +++  + K+  +LLS + DS   ++EV AGAGGTES DW
Sbjct: 178 RLAREENDNELEMESMRALADMRISAKEKELNALLSRDNDSCSCFIEVQAGAGGTESMDW 237

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M++ MY  WA++R +    +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRI
Sbjct: 238 AAMVMNMYKSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS  RRHTSF+++ V P++ D S   +I +SD RI+ +R+ G GGQH NTT+SA+RI
Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDASSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      S  EI WG QI
Sbjct: 358 VHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFI 452


>gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 332

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 157/320 (49%), Positives = 201/320 (62%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T D 
Sbjct: 3   EPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRLEADADLQKDTEDQ 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R  K
Sbjct: 63  LAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRGLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E      G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ +
Sbjct: 183 IPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQFQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT  E
Sbjct: 243 NRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTGYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG LD F+ A L
Sbjct: 303 TADVGGVMDGKLDPFIYAYL 322


>gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
 gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
          Length = 337

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  +  +P  W + I A+   +E   L         +Q+   +  + LE+ LEEDD 
Sbjct: 5   IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEM-LEEDDS 63

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
              +      +  K+   Y +   LLS   D N+A LE+H G+GGTE+QDWA+MLLRMY 
Sbjct: 64  IQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLLRMYQ 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RR
Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT  E      V+DGD++ F+ A L
Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDACL 331


>gi|283850198|ref|ZP_06367487.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
 gi|283574224|gb|EFC22195.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
          Length = 314

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 195/279 (69%), Gaps = 1/279 (0%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           + LA +++   IL   ++ +  +  E+   +  +   G  D+ DA LE+H GAGGTE+QD
Sbjct: 32  MSLAKDDNSPEILDALAEQIVSLGSELADAELAAFF-GPEDNADAILEIHPGAGGTEAQD 90

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMY RWAE+++F  + L+   G+EAG+KS TL I GP AYG L  E+G+HRL+R
Sbjct: 91  WAEMLLRMYRRWAERKQFGIKVLDFLPGDEAGVKSVTLQISGPYAYGLLDAEKGIHRLIR 150

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DS+ RRHTSF+S+ VYP     I+I++ E D R+D +RASG GGQHVN T SA+RI
Sbjct: 151 ISPFDSSGRRHTSFASVDVYPDAGLDIDIDVKEEDLRVDVFRASGPGGQHVNKTSSAIRI 210

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VVQCQ E+SQH+N+  A  +L+A+LY+LEL+K +        SK  IG+G QI
Sbjct: 211 THLPTGIVVQCQNEKSQHRNRESAMKVLKARLYDLELKKIQAEKQENYDSKNAIGFGSQI 270

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y +QPYQ+VKD RT +E      V+DG+LD F++  L
Sbjct: 271 RTYTMQPYQLVKDHRTGVEVGDVGAVMDGELDKFIRGYL 309


>gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
 gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
          Length = 361

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 155/340 (45%), Positives = 225/340 (66%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      ++S L      P+ W +   A++ ++E   L + +  +   Q  L D +  
Sbjct: 14  IFDVPALQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAVAA 73

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL   E D S+LQE SDNL+++  ++   + E LLSG  D N A L ++AGAGGT++QD
Sbjct: 74  LELVELEPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDAQD 133

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWAE+  +K    E+ +G+EAGIKSATL I G  AYG+L+ E+G HRLVR
Sbjct: 134 WAEMLLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHRLVR 193

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +D S+++EI + D  I T R+ G GGQ+VN  ++AVRI
Sbjct: 194 ISPFNANGKRQTSFAGVEVMPQLDHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAVRI 253

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQ 311
            H+PTG+ V+C QERSQ +NK +A  +L+AKL  + + QK +EIA+I      E  WG Q
Sbjct: 254 VHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADI-RGDAVEAAWGTQ 312

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PY++VKD+RT +E  +   V++G+LD+F++A L
Sbjct: 313 IRNYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYL 352


>gi|332703829|ref|ZP_08423917.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332553978|gb|EGJ51022.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 368

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 153/343 (44%), Positives = 217/343 (63%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L G  D D   +RL  +      P  W        +++E++ +   +  +  +     +
Sbjct: 20  SLWGRLDHDRDNERLRQIEDALSRPGAWDKPDRLTPMLQEKRQISEKLERLTVLHKTRQE 79

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
               L+LA E+    +L   S+ L  ++  ++  +   +L+G  D N A +E+H+GAGGT
Sbjct: 80  VEEWLDLAREDQTQEVLAILSEQLDVLQERLKDVELREMLAGPEDQNSAIMEIHSGAGGT 139

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA MLLRMY RW+E++ +K   L+  +GEEAG KS T+ ++G  AYG LKGE G+H
Sbjct: 140 EAQDWAEMLLRMYRRWSERQGYKVSILDFLEGEEAGFKSVTVQVEGLYAYGMLKGESGIH 199

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RL+RISP+D++ RRHTSF+S+ VYP V   I+I++ E D RID +RASGAGGQHVN T+S
Sbjct: 200 RLIRISPFDTSGRRHTSFASVAVYPDVGTDIDIDVREEDLRIDVFRASGAGGQHVNKTES 259

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTGVV QCQ E+SQ +NK  A  +L+A+LYELEL+K          SK  I W
Sbjct: 260 AVRITHLPTGVVAQCQNEKSQLRNKETALKILKARLYELELKKIAAARQAEYESKDTIAW 319

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIR+Y LQPY++VKD RT +E      VL+G++D  ++  L
Sbjct: 320 GSQIRTYTLQPYRLVKDHRTGMEIGDVEAVLNGEIDPLIRNFL 362


>gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
 gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
          Length = 325

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 158/323 (48%), Positives = 209/323 (64%), Gaps = 8/323 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAI-SFIK--EIQDRLCDNLILLELALEEDDCSILQET 88
           +P  W + I A+   +E   L N   +F K  E+QD +    ILL+   E  D S+  E 
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVE---ILLDFLAE--DESVHDEL 57

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   +
Sbjct: 58  VEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAK 117

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S
Sbjct: 118 GFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTS 177

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+
Sbjct: 178 VEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRT 237

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT
Sbjct: 238 QYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRT 297

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           + E      V+DGDLD F+ A L
Sbjct: 298 SFEVAQVDKVMDGDLDGFIDAYL 320


>gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|301799772|emb|CBW32341.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
 gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
 gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
          Length = 325

 Score =  303 bits (775), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+  E    
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191]
 gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191]
          Length = 371

 Score =  303 bits (775), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 164/350 (46%), Positives = 224/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS ++   G L       ++L+ L  +      W +   A+ + +E   +   +     
Sbjct: 15  ELSARIKNAGALIRVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADAVKTELETFSA 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D +   E+ALEE+  + + E S  L +I+ E++  +F+  LS  AD  +A + +
Sbjct: 75  LQKEMDDAVTYYEMALEENSETEMGEISSFLIKIENELKEIEFKIKLSDPADRLNAIMHI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA MLLRMYTRWAE    K +  +I  GEEAG+KS +L+I+G  AYG+L
Sbjct: 135 HAGAGGTESCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSVSLMIEGLYAYGYL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+NSRRHTSF+S  V P ++D I+IEI E D  +DT+R+ GAGGQ
Sbjct: 195 KSENGVHRLVRISPFDANSRRHTSFASCDVLPDIEDEIKIEIEEKDLEVDTFRSGGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI HIPTG+VV CQ ERSQ +N+  A  MLRAKLY++E  K+         
Sbjct: 255 NVNKVETAVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEMEKHYG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K +I WG QIRSYV  PYQ+VKDLRT  E +    V+DGDLD FM++ L
Sbjct: 315 QKGDIAWGHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYL 364


>gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
 gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
          Length = 327

 Score =  303 bits (775), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 212/320 (66%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++Q+   +  + LE+ L+EDD S+ +E   +
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEM-LDEDD-SLQEELEAS 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + FK
Sbjct: 61  LEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG +D F+ A L
Sbjct: 301 VAQVDKVMDGFIDGFIDAYL 320


>gi|317063162|ref|ZP_07927647.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
 gi|313688838|gb|EFS25673.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 328

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 218/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           T + + W +   +  +++E       ++  K+++  + +  +L++  +E  +     E  
Sbjct: 2   TMEENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDF-VEMGEADFQTELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +    +  ++++     LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++K
Sbjct: 61  EKHMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKK 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+
Sbjct: 121 YKISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VD+S+E+ I   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ
Sbjct: 181 EVMPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT+
Sbjct: 241 LNNRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  +   V+DGD+D F+   L
Sbjct: 301 AESGNIKAVMDGDIDIFINTYL 322


>gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
 gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
          Length = 285

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 143/277 (51%), Positives = 194/277 (70%), Gaps = 3/277 (1%)

Query: 77  LEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + +DD S  IL   ++ +  ++ E+   +  +   G  D+ DA LE+H GAGGTE+QDWA
Sbjct: 1   MAKDDGSPEILDALAEQIDTLRSELADAELAAFF-GPEDNADAILEIHPGAGGTEAQDWA 59

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RWAE+++F  + L+   G+EAG+KS TL I GP AYG L  E+G+HRL+RIS
Sbjct: 60  EMLLRMYRRWAERKRFDVKMLDFLPGDEAGVKSVTLQISGPYAYGLLAVEKGIHRLIRIS 119

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+ RRHTSF+S+ VYP     I+IE+ E D R+D +RASG GGQHVN T SA+RITH
Sbjct: 120 PFDSSGRRHTSFASVDVYPDAGVDIDIEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITH 179

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT +VVQCQ E+SQH+N+  A  +L+A+LY+LEL+K E        SK  IG+G QIR+
Sbjct: 180 LPTNIVVQCQNEKSQHRNRETAMKVLKARLYDLELKKLEAEKQESYESKNAIGFGSQIRT 239

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y +QPY++VKD RT ++      VLDGDLD F++  L
Sbjct: 240 YTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGFL 276


>gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4]
 gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4]
          Length = 368

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 158/350 (45%), Positives = 221/350 (63%), Gaps = 4/350 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D D   +R+  L     DP LW +   A+ +  E  ++   +   +E+
Sbjct: 12  LDATMTTVEKVLDIDELARRVDELEQMAADPDLWNDQDRAQKVTSELSYIQADLRRCREL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA EE+    ++E       ++ +VE  + +++LSGE D  +A + + 
Sbjct: 72  RQRIEDLPLMYELA-EEEGGDAVEEADAERASLREDVEAMEVKTMLSGEYDQREAVVNIR 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAEK   K E  +    EEAGIKSAT ++K P  YG L 
Sbjct: 131 AGAGGVDAADFAEMLMRMYVRWAEKNGHKVEVYDTSYAEEAGIKSATFIVKDPYMYGTLS 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+    IE+ E++ R+D YR+SG GGQ 
Sbjct: 191 VEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGGQS 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE +++EE A +    
Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKL--LERKRQEERAAMDALG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           S     WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +
Sbjct: 309 SGGNASWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFIEAGI 358


>gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
 gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
          Length = 329

 Score =  302 bits (774), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 153/326 (46%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT+ E      V+DGDLD F+ A L
Sbjct: 299 HRTSYEVAQVDKVMDGDLDGFIDAYL 324


>gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
 gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
          Length = 368

 Score =  302 bits (774), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 155/331 (46%), Positives = 218/331 (65%), Gaps = 5/331 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  DP LW +   A+ +  E   +   +  ++ ++ RL D  I+ ELA EE + + +
Sbjct: 35  LAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSLRSRLTDLPIMYELAEEEGEGTDI 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +  + L  ++ +++  +  ++LSGE DS +A + + +GAGG ++ DWA ML+RMY RWA
Sbjct: 95  AD--EELTDLRADIDALEVTTMLSGEYDSREALINIRSGAGGVDAADWAEMLMRMYIRWA 152

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK+  K E  +I   EEAGIKSAT ++ G   YG L  EQGVHRLVRISP+D+ +RR TS
Sbjct: 153 EKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLSVEQGVHRLVRISPFDNQARRQTS 212

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+ + V PVV+ +  I+I +S+ R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ 
Sbjct: 213 FAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQN 272

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           E+SQ +NKA A  +L+AKL E + Q +R E+  +G        WG Q+R+YVL P+QMVK
Sbjct: 273 EKSQIQNKASALRVLQAKLLERKRQEERAELDALGAGGNA--SWGNQMRNYVLHPFQMVK 330

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           DLRT  E   P  VLDGDLD F++A +  +K
Sbjct: 331 DLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361


>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
 gi|81717933|sp|Q82D82|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
           MA-4680]
          Length = 368

 Score =  302 bits (774), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 159/355 (44%), Positives = 225/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLSVLFEMAEEEDDPDTRAEAESELTAVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  L+ +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LDRRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G+++ F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364


>gi|237740205|ref|ZP_04570686.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|262068161|ref|ZP_06027773.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294782698|ref|ZP_06748024.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
 gi|229422222|gb|EEO37269.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|291378140|gb|EFE85658.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294481339|gb|EFG29114.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
          Length = 308

 Score =  302 bits (774), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 153/298 (51%), Positives = 211/298 (70%), Gaps = 1/298 (0%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           N +S  +++   + D  +L++  +E  + S   E  +  + +K ++E  +   LL GE D
Sbjct: 6   NIVSRYEKLATEVEDEEVLIDF-VESGESSFENELIEKHKTLKYDIEEFEVNLLLDGEYD 64

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L++
Sbjct: 65  MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVSELDFMEGDSVGVKSVTFLVE 124

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDD++E+EI+ +D RIDTY
Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDNVEVEINPADIRIDTY 184

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITH PTGVVV CQ+ERSQ  N+  A  ML++KL E+EL+K+E
Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPTGVVVTCQKERSQLSNRETAMKMLKSKLLEIELKKKE 244

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E     +  +T+IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L
Sbjct: 245 EEMKKIQGEQTDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302


>gi|302325967|gb|ADL25168.1| peptide chain release factor 2 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 389

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 152/345 (44%), Positives = 229/345 (66%), Gaps = 9/345 (2%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD +   + L  L   + DP+LW +  +A+ +M++  +L   I   KE+  + CD+L
Sbjct: 42  GGIFDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWKEVS-QTCDDL 100

Query: 71  I-LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E++ +E+   +      ++  +K  VE  +F+ +L+G  D+    + +H GAGGTE
Sbjct: 101 AELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMSIHPGAGGTE 160

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWA ML RMYT + E+ K   + ++  + E+AG+KSAT+ +   NAYG L+ E GVHR
Sbjct: 161 SQDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGLLRSEIGVHR 220

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+D+N+RRHTSF+++++YP  +D +E ++  S+ R+DTYR+SGAGGQ++N TDSA
Sbjct: 221 LVRISPFDANARRHTSFTAVYLYPEHED-VEFDLDMSEVRVDTYRSSGAGGQYINKTDSA 279

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLR---AKLYELELQKREEIANIGESSKTEI 306
           VR+TH+PTG++  CQ ERSQ +N+   + ML+   A+ Y LE + + + A + E  K E 
Sbjct: 280 VRMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRD-ARMAEKKKVE- 337

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYVLQPYQ+VKDLRT +E +  + VLDG +  F+ A L
Sbjct: 338 -WGSQIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 381


>gi|254520266|ref|ZP_05132322.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
 gi|226914015|gb|EEH99216.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
          Length = 325

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 160/321 (49%), Positives = 222/321 (69%), Gaps = 9/321 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS---ILQETSDN 91
            W+++  A+ + +E + + + I   + +  R+ D  IL EL  E+D+ S   +++E    
Sbjct: 6   FWEDIKRAEEVTKESKRIKDKIDRYESLVSRIEDVEILAELIDEDDEESIDEVIRE---- 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++ I+ +VE  + E LLSGE D NDA L +HAG GG+++ DW  MLLRMYTRW EKR FK
Sbjct: 62  IRSIEKDVEGYRIELLLSGEYDRNDAILTLHAGVGGSDANDWTEMLLRMYTRWCEKRGFK 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+  +G+EAGIKS TL +KG  AYG+LK E+GVHRLVRISP+++N +R TSF+S+ V
Sbjct: 122 VETLDYLEGDEAGIKSVTLKVKGEFAYGYLKAEKGVHRLVRISPFNANGKRQTSFASVEV 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +    +IEI   D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ ERSQ  
Sbjct: 182 LPELTKDQDIEIRSEDLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQSERSQFS 241

Query: 272 NKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK  A  ML++KL +L E   +E+I ++    K ++GWG QIRSYV  PY MVKD RT  
Sbjct: 242 NKDTAMAMLKSKLIDLKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNMVKDHRTGE 300

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  + + V++G++D+F+ A L
Sbjct: 301 ETANLNAVMNGEIDNFITAYL 321


>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|256787399|ref|ZP_05525830.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|19864260|sp|Q53915|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
          Length = 368

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 159/355 (44%), Positives = 224/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
 gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
          Length = 332

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 157/320 (49%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           P  W +  +A+ L+ +   L +   SF+K +Q    D    LEL  EE D  + +ET ++
Sbjct: 4   PDFWNDQEKAQKLINDNNLLKEKRDSFLK-LQKGYEDVSTALELLREEPDADLQKETEND 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  ++ E    + + LLSG+ D+++A LE+H GAGGTE+ DW  MLLRMY R+ +   FK
Sbjct: 63  LANLQEEFHNYELDLLLSGKYDNHNALLEIHPGAGGTEAMDWGQMLLRMYQRYCDSAGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+ V
Sbjct: 123 FEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VDDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT  E
Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
               + V+DG L  F+ + L
Sbjct: 303 TADVNGVMDGKLQPFIYSYL 322


>gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
 gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
          Length = 376

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 145/323 (44%), Positives = 221/323 (68%), Gaps = 2/323 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT  P  W N   A+  +++ +     +    EI  +  D  +L + A E+ D    +E 
Sbjct: 42  KTAAPEFWDNPKTAEAFLKQLRSKKKWVESYDEIHTQFEDLQVLADFAKEDPDSE--KEL 99

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   ++  ++E  +F+++LS E D   A L++ AGAGGTES DWA+ML+RMYT WAEK+
Sbjct: 100 DETFPQLVEKIEDLEFKNMLSNEGDELSAVLQITAGAGGTESCDWASMLMRMYTMWAEKQ 159

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K   L   +G+ AG+K+ TL I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF S
Sbjct: 160 GYKIRELNFQEGDVAGVKTVTLEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFVS 219

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+VDD+IEI I+ +D   +T RASGAGGQ+VN  ++AVR+ H PTG++++  + RS
Sbjct: 220 VYVYPLVDDTIEININPADISFETMRASGAGGQNVNKVETAVRLRHAPTGIIIENSESRS 279

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A  +LR++LYE+EL++R +  N  E++K +I WG QIR+YV+ PY++VKD+R+
Sbjct: 280 QLQNKEKAMQLLRSRLYEMELEERMKARNEIEANKMKIEWGSQIRNYVMHPYKLVKDVRS 339

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
             E +    V++G++  F+KA L
Sbjct: 340 GHETSDVDAVMNGNITPFLKAFL 362


>gi|225621552|ref|YP_002722811.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
 gi|225216373|gb|ACN85107.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
          Length = 312

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 161/309 (52%), Positives = 215/309 (69%), Gaps = 6/309 (1%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYK 102
           M+ER  L + I  ++ +     +   L+E+A+E +D  + +E       LQ++  E+E K
Sbjct: 1   MKERMLLLDKIEPVENLIKNSNNIYELVEMAIESNDSEMEKELETECLELQKVFDELETK 60

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
              +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+E
Sbjct: 61  ---NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDE 117

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK  +  ++G  AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IEIE
Sbjct: 118 AGIKQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEIE 177

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+A
Sbjct: 178 INPADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKA 237

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KLY+LE +K ++        KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG+
Sbjct: 238 KLYQLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGN 297

Query: 343 LDDFMKATL 351
           +D+F+ A L
Sbjct: 298 IDEFISAYL 306


>gi|46446965|ref|YP_008330.1| peptide chain release factor RF-2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400606|emb|CAF24055.1| probable peptide chain release factor RF-2 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 326

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 150/317 (47%), Positives = 215/317 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W N  +A++++ E + L       +E++ +  +   LL  A E ++ S ++E   +L  
Sbjct: 6   FWNNSEQAQLIINECRDLRAWTVPYQELKTKFENCKELLPEAYELNEESFIEELLRDLDS 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+  +   + + +LSGE D+ D YL +++GAGGTE+ DWA ML RMY RWA K+ +K E 
Sbjct: 66  IEKVLGDLEVQRMLSGEMDNKDCYLTINSGAGGTEACDWAQMLSRMYQRWAAKKGWKIEI 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++  DG+  G+KS TL  +G  AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ V P 
Sbjct: 126 IDFVDGDVVGLKSITLRFQGSYAYGYSKAEKGVHRLVRISPFDSNAKRHTSFASVDVSPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +   I++EI   D R+DT+R+SGAGGQHVN TDSAVR+TH+PTG+VV CQ +RSQ +NK 
Sbjct: 186 ITTDIQVEIKPEDVRVDTFRSSGAGGQHVNKTDSAVRLTHMPTGIVVSCQTQRSQVQNKE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
             + MLR+KLYE+E+ +RE+  N  +  K E  WG QIR+YV QPY +VKD RT  E  +
Sbjct: 246 ACYQMLRSKLYEMEVLEREKALNNLKGEKKENAWGSQIRNYVFQPYTLVKDTRTKAESGN 305

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DG+LD+F+ A L
Sbjct: 306 IQAVMDGELDEFVNAYL 322


>gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200]
          Length = 325

 Score =  302 bits (774), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+  E    
Sbjct: 3   EPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
 gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
          Length = 380

 Score =  302 bits (773), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 157/331 (47%), Positives = 218/331 (65%), Gaps = 8/331 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--DDCS 83
           L+ + E+P  W N  +A    ++ +++ + ++ I+ +  +  D + L+++   E  DD  
Sbjct: 37  LSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIERLNSQYTDIIDLIDMQNAEGVDDDD 96

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +  E    L   + ++E  +  +LL+   D  D  L ++AGAGGTE+ DWA+ML RMYTR
Sbjct: 97  MAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVILRLNAGAGGTEACDWASMLYRMYTR 156

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE++ F TE L++ DG+EAGIKS T  I G NAYG LK E GVHRLVRISP+++ ++R 
Sbjct: 157 WAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYGLLKSEHGVHRLVRISPFNAQAKRQ 216

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF S  V P +++ ++IEI+  D RIDTYR+SGAGGQH+N T SAVRITHIPTGVVV C
Sbjct: 217 TSFVSCDVMPDIEEDLDIEINPDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGVVVAC 276

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPY 320
           Q ERSQ +NK +A  ML+AKL+   + K+EE A      + E+    WG QIRSYVLQPY
Sbjct: 277 QNERSQFQNKDKAMQMLKAKLF---IMKQEEQAAKLAGIRGEVMDNAWGSQIRSYVLQPY 333

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MV D RT  + ++   VLDG+LD F+ A L
Sbjct: 334 TMVNDTRTGFKASNADGVLDGELDPFINAYL 364


>gi|260495130|ref|ZP_05815258.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
 gi|260197187|gb|EEW94706.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
          Length = 331

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 154/322 (47%), Positives = 221/322 (68%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           T + + W +  ++  +++      N +S  +++   + D  +L++  +E  + S   E S
Sbjct: 5   TFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIEDEEVLIDF-VESGETSFESELS 63

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  + +K +VE  +   LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW   R 
Sbjct: 64  EKHKILKNDVEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLRN 123

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+
Sbjct: 124 YKVTELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASV 183

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VD+++E+EI  +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ
Sbjct: 184 EVVPEVDENVEVEIDPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQ 243

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD RTN
Sbjct: 244 LSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTN 303

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  +   V+DG +DDF+ + L
Sbjct: 304 TEIGNVKAVMDGSIDDFINSYL 325


>gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           bromii L2-63]
          Length = 372

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 162/330 (49%), Positives = 220/330 (66%), Gaps = 8/330 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  +P  W +V +++ +++    L   +   + +  +  D   L+ELA EE+D S+L
Sbjct: 37  LELKATEPGFWDDVEKSQKVLQRTGSLKGKVEAYEGLVAKYEDTHALIELANEEEDESLL 96

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E    ++ +K  +E ++ ++LL+GE D N+A L  HAG+GGTE+QDWA ML RMYTRWA
Sbjct: 97  EEAESEVEAVKENLEKQRLQTLLTGEYDKNNAILTFHAGSGGTEAQDWAEMLYRMYTRWA 156

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E   FK + ++  DG+EAG+KSA LL++G NAYG+LK E GVHRLVR+SP+DS  RRHTS
Sbjct: 157 EAHGFKVKEVDYLDGDEAGLKSAVLLVEGENAYGYLKSEAGVHRLVRVSPFDSAGRRHTS 216

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS+ V P +    E+ I   D ++D YRASGAGGQ VN T SAVR+THIPTG+VV  Q 
Sbjct: 217 FSSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQKVNKTSSAVRLTHIPTGIVVASQV 276

Query: 266 ERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           ERSQ++N+  A NML +KL E++    L+K E+I  +    + EI WG QIRSYV  PY 
Sbjct: 277 ERSQYQNRDVAMNMLISKLVEIKEREHLEKIEDIKGV----QKEITWGSQIRSYVFMPYT 332

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKD RT  E  +   V+DGDLD F+ A L
Sbjct: 333 MVKDHRTGFETGNIQAVMDGDLDGFINAYL 362


>gi|21282445|ref|NP_645533.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|88194533|ref|YP_499328.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|161509023|ref|YP_001574682.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|21203882|dbj|BAB94581.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|87202091|gb|ABD29901.1| peptide chain release factor 2, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|160367832|gb|ABX28803.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 291

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 154/280 (55%), Positives = 200/280 (71%), Gaps = 3/280 (1%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDW
Sbjct: 6   DLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDW 65

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           ANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI
Sbjct: 66  ANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 125

Query: 194 SPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RI
Sbjct: 126 SPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRI 185

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
           TH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++  E+A I    + EIGWG Q
Sbjct: 186 THHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQ 244

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYV  PY MVKD RTN E      V+DGD+  F+++ L
Sbjct: 245 IRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 284


>gi|113461617|ref|YP_719686.1| peptide chain release factor 2 [Haemophilus somnus 129PT]
 gi|112823660|gb|ABI25749.1| bacterial peptide chain release factor 2 (bRF-2) [Haemophilus
           somnus 129PT]
          Length = 260

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 149/249 (59%), Positives = 192/249 (77%), Gaps = 1/249 (0%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F  + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+  G+ 
Sbjct: 9   EFRRMFSGQHDNCDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELVEVSSGDV 68

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AG+KSAT+ I G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD IEIE
Sbjct: 69  AGLKSATIRIAGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIEIE 128

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+A
Sbjct: 129 INPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKA 188

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KLYE+E+ K+       E SK++IGWG QIRSYVL   + +KDLRT +E  +   VLDGD
Sbjct: 189 KLYEMEIMKKNADKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGD 247

Query: 343 LDDFMKATL 351
           LD F++A+L
Sbjct: 248 LDRFIEASL 256


>gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae
           TIGR4]
 gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
 gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
 gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
 gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
 gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
          Length = 325

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 153/320 (47%), Positives = 206/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+  E    
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E  K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 332

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 156/320 (48%), Positives = 200/320 (62%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T D 
Sbjct: 3   EPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTEDQ 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R  K
Sbjct: 63  LAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRGLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E      G+EAG+KS ++ I G N YG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEVNNFEPGDEAGLKSVSVRISGKNTYGLLKSEHGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ +
Sbjct: 183 IPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQFQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT  E
Sbjct: 243 NRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTGYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG LD F+ A L
Sbjct: 303 TADVGGVMDGKLDPFIYAYL 322


>gi|134097701|ref|YP_001103362.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|166225115|sp|A4F8R2|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 367

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 155/350 (44%), Positives = 222/350 (63%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS  L  +  + D D    +++ L  +   P LW +V  A+ +  +  H  + +  IK+
Sbjct: 11  ELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRKIKD 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  +L EL+ +E D S L E      ++K ++E  +  +LLSG+ D  +A + +
Sbjct: 71  LRQRVEDLEVLYELSEDEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQREAVVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            A AGG ++ D+A ML+RMY RWAE+ ++  E  +    EEAG+KSAT  +  P AYG L
Sbjct: 131 RAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  +EI E D R+D +R+SG GGQ
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L++KL  L  +K +E A +   
Sbjct: 251 SVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKL--LAKKKEQERAELDAL 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +   WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG +D F++A +
Sbjct: 309 KDSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGI 358


>gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131]
 gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131]
          Length = 326

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +Q+   +  +LLE+ L+EDD S+ +E  +N
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDEDD-SLKEELEEN 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     FK
Sbjct: 61  LMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG+++ F+ A L
Sbjct: 301 LAQVDKVMDGEINGFIDAYL 320


>gi|223558105|gb|ACM91108.1| peptide chain release factor 2 [uncultured bacterium Rlip2]
          Length = 330

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 166/322 (51%), Positives = 219/322 (68%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ L +E   L   +     +  +  D + L E+ +EE D  +  +     
Sbjct: 4   PDFWDDAEAAQALNQELADLKGGVDTYNALVAKTDDLMTLWEMGMEEKDEGVEADVKAEY 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             +K E+   + E LLSGE D+N+AYLE+HAGAGGTE+QDW  MLLRMY RWAE+  F  
Sbjct: 64  DSLKNELRSLELELLLSGEYDANNAYLELHAGAGGTEAQDWTQMLLRMYGRWAERHGFSV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L++  G+EAG+KS  L +KG NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+  V 
Sbjct: 124 ETLDLQPGDEAGVKSVMLFVKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSACDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P ++D+ E+EI   D R+DTYR+SGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ +N
Sbjct: 184 PEMEDAKEVEIDMDDVRVDTYRSSGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQIQN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +     MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY MVKD RT  E 
Sbjct: 244 REVCLRMLRAKLFELEEKKKEEERAKLEGVQQKIEWGSQIRSYVFQPYTMVKDHRTGEET 303

Query: 333 TSPSDVLDGDLDDFMKATLAIK 354
            +   V+DG++D F+++ LA K
Sbjct: 304 GNVQAVMDGEIDPFIESFLAAK 325


>gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1]
 gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           SSI-1]
          Length = 337

 Score =  302 bits (773), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 151/331 (45%), Positives = 213/331 (64%), Gaps = 2/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+ L+ED
Sbjct: 3   EEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  + +E  +NL ++       +   LLS   D N+A LE+H G+GGTE+QDW ++LLRM
Sbjct: 62  DF-LKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V
Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY
Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN E      V+DG+++ F+ A L
Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331


>gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
 gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
          Length = 326

 Score =  301 bits (772), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 145/242 (59%), Positives = 187/242 (77%), Gaps = 2/242 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLSGE D N+A + +H+GAGGT++QDW  MLLRMYTRWAEK+ +K + ++I  G+EAGIK
Sbjct: 78  LLSGEYDKNNAIVSLHSGAGGTDAQDWTEMLLRMYTRWAEKKGYKVDTIDILPGDEAGIK 137

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P + ++ +IEI   
Sbjct: 138 SASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLEVIPELRENQDIEIKAD 197

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ +NK  A +ML++KL E
Sbjct: 198 DLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQFQNKDTAMSMLKSKLIE 257

Query: 287 L-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           L E   +E+I ++    K EIGWG QIRSYV QPY MVKD RTN E  +   V+DGD+D+
Sbjct: 258 LKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQPYTMVKDHRTNTEMGNVDAVMDGDIDN 316

Query: 346 FM 347
           F+
Sbjct: 317 FI 318


>gi|195973766|gb|ACG63448.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  301 bits (772), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 155/287 (54%), Positives = 205/287 (71%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWNNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288


>gi|6469929|gb|AAF13494.1|AF130466_1 peptide chain release factor 2 [Campylobacter jejuni]
          Length = 269

 Score =  301 bits (772), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 151/245 (61%), Positives = 186/245 (75%), Gaps = 2/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLSGE D  +A + +H GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K
Sbjct: 21  LLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLK 80

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             + L+KG NAYG+LK E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E 
Sbjct: 81  DVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEK 140

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYE
Sbjct: 141 DIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYE 200

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LEL K+++ AN GE  K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   
Sbjct: 201 LELMKQQDSANTGE--KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKM 258

Query: 347 MKATL 351
           ++  L
Sbjct: 259 IEGVL 263


>gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9]
 gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus
           thermophilus LMD-9]
          Length = 337

 Score =  301 bits (772), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 152/329 (46%), Positives = 209/329 (63%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  +  +P  W + I A+   +E   L         +++   +  + LE+ LEEDD 
Sbjct: 5   IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEM-LEEDDS 63

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
              +      +  K+   Y +   LLS   D N+A LE+H G+GGTE+QDWA MLLRMY 
Sbjct: 64  VQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQ 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RR
Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT  E      V+DGD++ F+ A L
Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331


>gi|195973770|gb|ACG63450.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  301 bits (772), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 155/287 (54%), Positives = 205/287 (71%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288


>gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
           33331]
          Length = 368

 Score =  301 bits (772), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 158/355 (44%), Positives = 224/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D   L E    L+ ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAEDEGDADALAEAESELESVRKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAVEVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  +EI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +  + 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|149177843|ref|ZP_01856442.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
 gi|148843333|gb|EDL57697.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
          Length = 331

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 152/319 (47%), Positives = 215/319 (67%), Gaps = 2/319 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W N  +A+ L+ E Q +   +  + ++ +   D  +L+E   EE     + E S   +R
Sbjct: 6   FWDNQEKAQGLVNEMQQIQLVVKPLTQLVEGAEDLEVLIEFIEEEGSEDSIPELSATAER 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++  +E+ + ++++S   D + AYL + AG GGT+S DWA MLLRMY RW E+R F  E 
Sbjct: 66  LESILEHLELQAMMSAPEDGSAAYLSIQAGEGGTDSSDWAEMLLRMYLRWCERRGFNVEL 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+  D EEAGI+SAT+ I+G  AYG+LKGE G HRL+RISP+DS  RRHTSF+++ V P 
Sbjct: 126 LDRSDAEEAGIRSATIRIEGDYAYGYLKGETGNHRLIRISPFDSAGRRHTSFAAVDVSPD 185

Query: 215 VDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           + +  EIEIS + D R DTYRASGAGGQH+N TDSA+R+TH+ + VVVQCQ  RSQHKN+
Sbjct: 186 MGEVAEIEISWDQDVREDTYRASGAGGQHINKTDSAIRLTHLESNVVVQCQNNRSQHKNR 245

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-IRSYVLQPYQMVKDLRTNIEK 332
           A+A  ML++KL+++E +KR+         K++IG+G Q +R+YVL P Q VKD RT  + 
Sbjct: 246 AEARKMLKSKLFQIEQEKRDAELAAKRGGKSKIGFGGQTVRNYVLHPDQYVKDARTGFKA 305

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +P  +LDGDLD F++A L
Sbjct: 306 GNPGPILDGDLDGFLEAFL 324


>gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4]
 gi|254790919|sp|C1B1L3|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4]
          Length = 368

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 155/352 (44%), Positives = 227/352 (64%), Gaps = 6/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H    +  ++E
Sbjct: 11  ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA E++    + +       ++ ++   + +++LSGE D  DA + +
Sbjct: 71  LRTRLDDMPVLYELA-EDEGAEAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+++E+D R+D YR+SG GGQ
Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE++++EE A + ++
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LEVKRKEERAEM-DA 306

Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F+++ +
Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSSVLDGDIDGFLESGI 358


>gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
          Length = 325

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 152/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+  E    
Sbjct: 3   EPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
 gi|259585260|sp|C5BYB6|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
          Length = 374

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 151/345 (43%), Positives = 220/345 (63%), Gaps = 1/345 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D D    R++ L+     P LW +   A+ +     H  + +  +  ++ R+
Sbjct: 16  LEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTLRSRI 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L++LA EEDD   L E    L +I+  +   +  +LL+GE DS +A + + +GAG
Sbjct: 76  DDLETLVQLAAEEDDADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIRSGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A MLLRMY RWAE++ + T+ L+    EEAG+KSAT  +K P A+G L  E G
Sbjct: 136 GVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLSVEAG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG GGQ VNTT
Sbjct: 196 THRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPETDIRIDVFRSSGPGGQSVNTT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L +Q+ E       +   + 
Sbjct: 256 DSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LAMQEEENAKKKELAGDVKA 314

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG Q+RSYVLQPYQMVKDLRT  E  +PS V DGD+DDF++A +
Sbjct: 315 SWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGI 359


>gi|195973764|gb|ACG63447.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 154/287 (53%), Positives = 205/287 (71%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQEVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288


>gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 524

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 157/361 (43%), Positives = 212/361 (58%), Gaps = 29/361 (8%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             W   + RL  L+ +     LW +   A  + RE   L   +  +   +  L +++ +L
Sbjct: 130 LQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDML 189

Query: 74  ELALEEDD-----CSILQETSDNLQRIKLEVEY-----------------------KQFE 105
           +LA EE+D       +L   S  L      V                         K+ E
Sbjct: 190 KLAKEENDSELESVGVLALISQTLGMFSFSVSVSLGMINPKETLKALIDMRRVSKEKELE 249

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLS + D    Y+EV AGAGGTES DWA M++ MY  WA++RKF    ++   GE AGI
Sbjct: 250 ALLSADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGI 309

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEIS 224
           K AT+ + G  AYG+ K E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  +EI+
Sbjct: 310 KRATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEIN 369

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +SD RI+ +R+ GAGGQH NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L
Sbjct: 370 DSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRL 429

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            +LE+ ++  +      S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD
Sbjct: 430 DQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 489

Query: 345 D 345
           +
Sbjct: 490 E 490


>gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1]
 gi|123339715|sp|Q0S2Q6|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1]
          Length = 368

 Score =  301 bits (771), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 155/352 (44%), Positives = 227/352 (64%), Gaps = 6/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H    +  ++E
Sbjct: 11  ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA E++    + +       ++ ++   + +++LSGE D  DA + +
Sbjct: 71  LRTRLDDMPVLYELA-EDEGADAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+++E+D R+D YR+SG GGQ
Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE++++EE A + ++
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LEVKRKEERAEM-DA 306

Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F+++ +
Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLESGI 358


>gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44]
 gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44]
          Length = 248

 Score =  301 bits (771), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 144/245 (58%), Positives = 187/245 (76%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +  GEAD  + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIK
Sbjct: 1   MFGGEADPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYG L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ S
Sbjct: 61  SATIKVEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+
Sbjct: 121 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYD 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR E     E +KT++GWG QIRSYVL   + +KDLRTN+E ++   VLDGDLD F
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|257468914|ref|ZP_05633008.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 326

 Score =  301 bits (771), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 148/320 (46%), Positives = 217/320 (67%), Gaps = 1/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           + + W +   +  +++E       ++  K+++  + +  +L++  +E  +     E  + 
Sbjct: 2   EENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDF-VEMGEADFQTELEEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
              +  ++++     LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++K+K
Sbjct: 61  HMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKKYK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+ V
Sbjct: 121 ISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VD+S+E+ I   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ  
Sbjct: 181 MPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQLN 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT+ E
Sbjct: 241 NRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTSAE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +   V+DGD+D F+   L
Sbjct: 301 SGNIKAVMDGDIDIFINTYL 320


>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
          Length = 368

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 158/355 (44%), Positives = 224/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG ++RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
 gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
          Length = 326

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +Q+   +  +LLE+ L+EDD S+ +E  +N
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDEDD-SLKEELEEN 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     FK
Sbjct: 61  LMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG+++ F+ A L
Sbjct: 301 LAQVDKVMDGEINGFIDAYL 320


>gi|195973762|gb|ACG63446.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|195973768|gb|ACG63449.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 154/287 (53%), Positives = 205/287 (71%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288


>gi|78187873|ref|YP_375916.1| peptide chain release factor 2 [Chlorobium luteolum DSM 273]
 gi|78167775|gb|ABB24873.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           luteolum DSM 273]
          Length = 363

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 224/345 (64%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD D   +++  L   + +P  W +   A  +++E     + +   +++  +  
Sbjct: 16  NSYGGIFDVDQRKEKIEDLEKVSGNPEFWNDQKAAHAVLKELNENRSWVEGYEKLAGKAE 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                L +A E +D S  +E + ++  I+ E+   +F+++LSG+ D  +A + +HAGAGG
Sbjct: 76  SCRDELAIADELEDESFERELTASIDAIEQEIAAIEFKNMLSGKDDPGNAIITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVYTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I 
Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREVEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGD+DDFM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDIDDFMEKYLS 359


>gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152]
 gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152]
          Length = 367

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 152/351 (43%), Positives = 232/351 (66%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +++ L    + D  +  ++    KT +P  W +   A+++M+E +     +     I
Sbjct: 10  ISTRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELRFKKKWVEDYNTI 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             RL ++LI+     +ED+           + I L +E  +F+++LS E DS  A +++ 
Sbjct: 70  I-RLNEDLIVFYEFYKEDEADEKDVVQQYEKTIAL-LEDIEFKNMLSDEGDSLSAVIQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML RMYT W+EK+ FK + L    G+ AGIK+ T+ ++G  A+GWLK
Sbjct: 128 AGAGGTESCDWAEMLFRMYTMWSEKQGFKLKTLNYQAGDAAGIKTVTVEVEGDYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYPV DDSIEI+I+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPVADDSIEIDINPADIEITTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH P+G+ + C   RSQH N+A A  ML+++LYE+ELQK++   +  E++
Sbjct: 248 VNKVETKVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQKQQAARDDIEAN 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +  WG QIR+YV+ PY++VKD+RT  E  +   V+DG+++ F+KA L +
Sbjct: 308 KMKNEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAYLML 358


>gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
 gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
          Length = 371

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/354 (45%), Positives = 227/354 (64%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H  +    + E+
Sbjct: 12  LDATLTTVEKVLDLEELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSEFRKVSEL 71

Query: 63  QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  E   D  S L +   +   ++ ++E  + +++L+GE D  DA +
Sbjct: 72  RQRLDDLPVLYELAEAEEGDDRVSALADADADRAALRADIEAMEVKTMLAGEYDQRDALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAG+KSAT  +K P  YG
Sbjct: 132 NIRSGAGGVDAADWALMLMRMYIRWAEQHGYGVEVYDTSYAEEAGLKSATFAVKAPYMYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV  +  I+I E+D ++D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVQTTDHIDIDENDVKVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL  LE +++EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQAKL--LERKRQEERAEL- 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K + G  WG Q+RSYVL PYQMVKDLRT +E  +PS VLDG+LD F++A +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTGVEDNNPSAVLDGELDKFIEAGI 362


>gi|188586825|ref|YP_001918370.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351512|gb|ACB85782.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 344

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 170/333 (51%), Positives = 226/333 (67%), Gaps = 3/333 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALE- 78
           +RL  L  +  +P  W +   AK + +ERQ L   +  IKE+ D L D + +++EL+ E 
Sbjct: 3   KRLKELEKQMTEPGFWDDQDRAKKVTQERQELKEHLDEIKEL-DELKDEVSVMIELSEED 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D + ++E    L + + ++   + +++L    D N+A + +HAGAGGTESQDW  ML 
Sbjct: 62  ETDGTNMKEIKQALFQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAGGTESQDWVEMLH 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW E R F  E L+   G+EAG+KS T+++KG  A+G+LK E GVHRLVR+SP+DS
Sbjct: 122 RMYIRWMEHRGFNYETLDFLPGDEAGVKSVTMMVKGKYAFGYLKSEAGVHRLVRVSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF+S+ V P +DD IEI+I + D +IDTYRASGAGGQHVNTTDSAVRITH PTG
Sbjct: 182 SGRRHTSFASMDVVPEIDDDIEIDIKDDDLKIDTYRASGAGGQHVNTTDSAVRITHHPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ ERSQHKN+  A  +L+AKL  +E +KR +        K EI WG QIRSYV  
Sbjct: 242 IVVQCQNERSQHKNREVAMKILKAKLAAIEEEKRRQEQEAMRGDKKEIAWGSQIRSYVFH 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY MVKD RTN+E+ +   VLDG LD F++  L
Sbjct: 302 PYTMVKDHRTNLEEGNADAVLDGKLDHFIQEYL 334


>gi|167761288|ref|ZP_02433415.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
 gi|167660954|gb|EDS05084.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
          Length = 312

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 153/306 (50%), Positives = 216/306 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E +HL   +  I+ +     D  +L+E+  E++D S+ +E  + ++  +   E  + +
Sbjct: 1   MKELKHLKELVETIQNLYASYDDINLLIEMGYEDEDPSMAREIEEEIRGFETSYEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA+ML RMY+RWAE++ F  + L+  DG+ AGI
Sbjct: 61  TLLSGEYDACNAIVTIHAGAGGTESCDWASMLYRMYSRWAERKGFTIQVLDYLDGDIAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IEI++
Sbjct: 121 KTVTFEVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+ KL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKVKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       EIG+G QIRSYV+QPY MVKD RTN+E ++   V+DG +D 
Sbjct: 241 LMKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNVENSNVGAVMDGSIDM 300

Query: 346 FMKATL 351
           F+ A L
Sbjct: 301 FINAYL 306


>gi|195973774|gb|ACG63452.1| peptide chain release factor 2 [Francisella noatunensis]
 gi|198417115|gb|ACH87844.1| PrfB [Francisella noatunensis subsp. noatunensis]
          Length = 294

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 154/287 (53%), Positives = 205/287 (71%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGRQKVELENIVHNCEHISETLETLTELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288


>gi|86143360|ref|ZP_01061762.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
 gi|85830265|gb|EAQ48725.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
          Length = 368

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 152/325 (46%), Positives = 216/325 (66%), Gaps = 2/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT DP+ W +  EA+  MR  +   N +   ++      D  +LLE   E D     +E 
Sbjct: 36  KTFDPNFWNDPKEAEQFMRMLREKKNWVKDYEQAVTLTEDLEVLLEFHKEGDASE--EEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                ++   VE  +F+++LS E D   A L++ AGAGGTES DWA+ML+RMY  W+EK 
Sbjct: 94  DKQYDKVTRLVEAMEFKNMLSDEGDDLSAVLQITAGAGGTESCDWASMLMRMYLMWSEKN 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK + L   +G+ AGIK+ TL I+G  A+GWLK E GVHRLVRISP+DSN++RHTSF+S
Sbjct: 154 GFKVKELNYQEGDVAGIKTVTLEIEGAYAFGWLKSENGVHRLVRISPFDSNAKRHTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+ DDSIEI+I+ +D   D  R+SGAGGQ+VN  ++   +TH PTG+V+   + RS
Sbjct: 214 VYVYPLADDSIEIDINPADISWDFARSSGAGGQNVNKVETKAILTHHPTGIVIHNSETRS 273

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+ +A  ML+++LYE+EL+KR+   +  E+ K  I WG QIR+YVL PY+++KD+RT
Sbjct: 274 QLENREKAMQMLKSQLYEIELKKRQAARDEIEAEKKSIEWGSQIRNYVLHPYKLIKDVRT 333

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
             E  +   VLDGDLD+F+KA L +
Sbjct: 334 GEETGNTDAVLDGDLDNFLKAYLMM 358


>gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1]
 gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1]
          Length = 332

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 155/320 (48%), Positives = 205/320 (64%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           P  W N  +A+ L+ E   L +   SF+K +Q    D    +EL  EE D  + +E   +
Sbjct: 4   PDFWNNQEKAQKLISETNRLKEKRDSFLK-LQTSYEDETTAVELLREEPDPDLQKEVEAD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  ++ +    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+ +   FK
Sbjct: 63  LATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDTAGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+ V
Sbjct: 123 FEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VDDSI+I+I   D R+D YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT  E
Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGHE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG L  F+ + L
Sbjct: 303 TADAQGVMDGKLQPFIYSYL 322


>gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
 gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
          Length = 359

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 153/341 (44%), Positives = 226/341 (66%), Gaps = 3/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      ++  L  +   P  W++   A+ +++E   L   ++  ++ Q +  D   +
Sbjct: 12  IFDLKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAAAI 71

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            EL  E +D ++L E  +NL  ++ E+   + + +LSGE D+  A L ++AGAGGT++QD
Sbjct: 72  AELLTEAEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDAQD 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRW+EK+ +K    EI +G+EAG+KSATL + G  A+G+LK E+G HRLVR
Sbjct: 132 WAEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRLVR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           ISP+++N +R TSF+ + V P++ D++++++I E D  I T RA G GGQ+VN  ++AVR
Sbjct: 192 ISPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETAVR 251

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           I H+PTGV V+C QERSQ +NK +A  +L+AKL  +  ++R +EIA I      E  WG 
Sbjct: 252 IVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEI-RGDMVEAAWGN 310

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRTN E T    V+DGDLD F++A+L
Sbjct: 311 QIRNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASL 351


>gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 327

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 210/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+ + ++   L +       +Q+   +  + LE+ LEEDD S+  +   +
Sbjct: 3   EPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEM-LEEDD-SVKDDLEAS 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + FK
Sbjct: 61  LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD++ F+ A L
Sbjct: 301 VAQVDKVMDGDIEGFIDAYL 320


>gi|193215043|ref|YP_001996242.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088520|gb|ACF13795.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
          Length = 366

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 160/351 (45%), Positives = 228/351 (64%), Gaps = 3/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKE 61
           +S +L+ L G  D D  +  ++ L  KT     W N   A+ +++E   H +    F+ +
Sbjct: 12  ISERLSLLRGFLDIDARLNAIAELEKKTAAEGFWSNQESAQKVLKEISGHREWTEDFL-D 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L      LE+A E +D S L E   N+ ++   V   +F ++LSG  D  +A L +
Sbjct: 71  LEKTLQGEEESLEIAEELEDESYLAEAEKNIDKLDRAVHALEFRNMLSGADDKRNALLTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDWA+ML RMY RWAE+R FK    +  +G+ AGIK+ATL I+G  AYG+L
Sbjct: 131 HAGAGGTEAQDWADMLYRMYMRWAERRGFKVFTDDYQEGDGAGIKTATLEIQGDYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+D+N+RRHTSF+S++ YP   D +EIEI + D  +DT+R+ G GGQ
Sbjct: 191 KAENGVHRLVRVSPFDANARRHTSFASVYAYPEAPDDVEIEIRKEDLEMDTFRSGGKGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI H+P+G+VV CQQERSQ +N+ +A  MLR++LY+L+ ++ E      E 
Sbjct: 251 NVNKVETAVRIKHVPSGIVVACQQERSQFQNRERAMKMLRSRLYQLKREEEEAAKLALEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYVL   + +KD RTN E  +   VLDGD+D F++  LA
Sbjct: 311 KKKKIEWGSQIRSYVLDD-RRIKDHRTNHESFNVEAVLDGDIDQFIERYLA 360


>gi|296876160|ref|ZP_06900214.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
 gi|296432871|gb|EFH18664.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
          Length = 336

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 153/331 (46%), Positives = 209/331 (63%), Gaps = 2/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ ILL+  L ED
Sbjct: 3   EEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDF-LAED 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    +      +  K    Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRM
Sbjct: 62  DSVKEELIEKLEELDKRMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+     FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V
Sbjct: 181 RRHTSFTSVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V    +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY
Sbjct: 241 VASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPY 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN E      V+DGD+D F+ A L
Sbjct: 301 TMVKDHRTNYEVAQVDKVMDGDIDGFIDAYL 331


>gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
 gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
          Length = 320

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 156/318 (49%), Positives = 216/318 (67%), Gaps = 9/318 (2%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDCSILQETSDNLQRIK 96
           + AK+L++E+Q ++  +S   E+   + D   L  +    L E+D  +L   +D  +  K
Sbjct: 1   MAAKILLKEKQEVEVVVSQYDELLLLIDDAKTLQAMVSEGLVEEDMEML--ATDIFK--K 56

Query: 97  LEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           LE  Y + +  +LL+G+ D  +AY+ +H+G+GG+++QDW  MLLRMYTRWAE + F+ + 
Sbjct: 57  LEAGYHKLKVTTLLAGKHDKANAYISIHSGSGGSDAQDWGKMLLRMYTRWAENKGFQIDV 116

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++++    AG KSATLLIKG NAYG+LK E+GVHRLVRISP+DS+SRRHTSF+S+ V P 
Sbjct: 117 IDLNQNGVAGFKSATLLIKGLNAYGYLKKERGVHRLVRISPFDSSSRRHTSFASVDVIPE 176

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +     I+I + D RID +RASGAGGQHVN TDSAVRI H+PT +VV CQ ERSQH NK 
Sbjct: 177 IKTDKVIKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPTKIVVTCQNERSQHMNKE 236

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A +ML +KL EL+ ++ +E  N       +I WG QIRSYV  PY+MVKD RT  E  +
Sbjct: 237 AAMHMLISKLMELKEKEHKESINDLTGDYNQITWGSQIRSYVFHPYRMVKDHRTGAEMGN 296

Query: 335 PSDVLDGDLDDFMKATLA 352
              V+DGDLD F++  L+
Sbjct: 297 VDAVMDGDLDYFIQMELS 314


>gi|224371835|ref|YP_002605999.1| PrfB [Desulfobacterium autotrophicum HRM2]
 gi|223694552|gb|ACN17835.1| PrfB [Desulfobacterium autotrophicum HRM2]
          Length = 329

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/317 (49%), Positives = 208/317 (65%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A   ++ER  + + I    +I   + D   LLELA EE+D  + +E    L R
Sbjct: 7   FWNDPDTATAKLKERTRISDLIETWDKIFAEIEDAETLLELAHEEEDKEVEREVELQLNR 66

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  +V+      +L GE D+  A + ++AGAGGT+SQDW  ML RMYTRW +K+  K + 
Sbjct: 67  LGQKVKKFSVAIMLDGEDDTKSAIVSINAGAGGTDSQDWTEMLFRMYTRWIDKKGLKLQM 126

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIK  T  + G  +YG LK E GVHRLVRISP+++  +R TSF+S++VYP 
Sbjct: 127 IDYQPGDEAGIKGVTFSVSGEYSYGLLKVESGVHRLVRISPFNAGGKRQTSFASVFVYPE 186

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           + D I +EI E D RID YRASGAGGQHVN T SAVRITH+PTGVVVQCQQE SQH+NK 
Sbjct: 187 LKDEIRVEIDEGDLRIDVYRASGAGGQHVNKTSSAVRITHLPTGVVVQCQQEPSQHRNKE 246

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  +L+++LY+LE +K+         +K +I WG QIRSYVL PY+MVKD RT+ E   
Sbjct: 247 IAMKVLQSRLYQLEKEKQNRKMQDLHDTKDDIAWGSQIRSYVLHPYRMVKDHRTDYEVGD 306

Query: 335 PSDVLDGDLDDFMKATL 351
              VLDGDLD F++ TL
Sbjct: 307 VDRVLDGDLDQFIEETL 323


>gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 340

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 160/335 (47%), Positives = 218/335 (65%), Gaps = 5/335 (1%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  +   P LW +   A+ +  +  HL   +   + ++ R+ D  IL ELA  EDD 
Sbjct: 5   IAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRGRIDDLEILFELAEAEDDP 64

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
               E    L+ ++  ++  +  +LLSGE D  +A + + A AGG ++ D+A  L RMY 
Sbjct: 65  DARAEAEAELESVRKALDEMEVRTLLSGEYDEREALVNIRAEAGGVDAADFAEQLQRMYL 124

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAE+  + TE  E    EEAGIKS T ++K P AYG L  EQG HRLVRISP+D+  RR
Sbjct: 125 RWAERHNYGTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRISPFDNQGRR 184

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TSF+ + V PVV+ +  IEI ES+ R+D YRASG GGQ VNTTDSAVR+THIPTG+VV 
Sbjct: 185 QTSFAGVEVLPVVEKTDHIEIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPTGIVVS 244

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--WGRQIRSYVLQPY 320
           CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ K + G  WG Q+RSYVL PY
Sbjct: 245 CQNERSQIQNKASAMNVLQAKL--LERRRQEEQARM-DALKGDGGNSWGNQMRSYVLHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QMVKDLRT+ E  +P  VLDG++D F++A +  +K
Sbjct: 302 QMVKDLRTDFEVGNPQSVLDGEIDGFLEAGIRWRK 336


>gi|120602348|ref|YP_966748.1| peptide chain release factor 2 [Desulfovibrio vulgaris DP4]
 gi|120562577|gb|ABM28321.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           vulgaris DP4]
          Length = 310

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/279 (55%), Positives = 197/279 (70%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L LA E++    L+   + + R++  +E  +   LLSG+ D   A LE+H GAGGTE+QD
Sbjct: 23  LLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQD 82

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMY RWA+   +KTE L+  DG+EAGIKS TL I GPNAYG LKGE+G+HRL+R
Sbjct: 83  WAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIR 142

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D++ RRHTSF+S+ V P V   I+IEI ++D RID +R+SG GGQ VNTT SAVR+
Sbjct: 143 ISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRV 202

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+V QCQ E+SQH NK  A  +LR +LYELEL+K EE       +K  IG+G QI
Sbjct: 203 THIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFGSQI 262

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y LQPY++VKD RTN E      VLDG LD  ++  L
Sbjct: 263 RTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 301


>gi|282875665|ref|ZP_06284536.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|281295692|gb|EFA88215.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|329723235|gb|EGG59765.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU144]
 gi|329736827|gb|EGG73092.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU028]
 gi|329737925|gb|EGG74149.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU045]
          Length = 333

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 221/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ +   L + ++   ++ + + D     EL  EE D  +  E  + 
Sbjct: 4   DPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELEEE 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+  FK
Sbjct: 64  VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++E E+A I    + +IGWG QIRSYV  PY M+KD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMIKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DG++  F++A L
Sbjct: 303 EETGKVDAVMDGEIGPFIEAYL 324


>gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444804|gb|EDP21808.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 373

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 212/331 (64%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R+  L      P  + +   +K +  E   L   ++  +++Q    D   +LE+  EE 
Sbjct: 32  KRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLEMLDEEY 91

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +++ E  + +  +   VE  Q  ++L+GE D ++A L  HAG GGTE+QDWA ML RM
Sbjct: 92  DPAMIPEAEEAVNTVGKAVEELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEMLYRM 151

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y +WA+      E L+  DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+D+N+
Sbjct: 152 YNKWAQAHGMTVEVLDYQDGDEAGLKSASMMVKGANAYGLLKSENGVHRLVRVSPFDANA 211

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RR TSF+S+ V P +D++I++ I   D  +  YR+SGAGGQH+N T SAVR+ H PTG+V
Sbjct: 212 RRQTSFASLEVMPELDNTIQVNIRPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKPTGIV 271

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + EI WG QIRSYV  PY
Sbjct: 272 VNCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYVFMPY 331

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN E  +   V+DGD+D+F+ A L
Sbjct: 332 TMVKDHRTNYETGNVDAVMDGDIDEFIFAYL 362


>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 379

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 159/360 (44%), Positives = 226/360 (62%), Gaps = 16/360 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D+   ++  L  +  DP LW +   A+ +  +  H+   I  +  +
Sbjct: 12  LNSTLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTL 71

Query: 63  QDRLCDNLILLELA------LEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSN 115
           + R+ D  ++ ELA       + D     +E +D+  + ++ E+E  + +++LSGE D  
Sbjct: 72  RQRVDDMPVMYELADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDER 131

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + + + AGG ++ DWA ML+RMYTRW E+   K +  +I   EEAGIKSAT ++ G 
Sbjct: 132 EAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGD 191

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+
Sbjct: 192 YMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRS 251

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L AKL  L+ ++ EE 
Sbjct: 252 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKL--LDRKREEEQ 309

Query: 296 ANI----GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           A +    G+ S +   WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +
Sbjct: 310 AEMNALKGDGSNS---WGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGI 366


>gi|33519726|ref|NP_878558.1| peptide chain release factor 2 [Candidatus Blochmannia floridanus]
 gi|33504071|emb|CAD83332.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           floridanus]
          Length = 365

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 206/298 (69%), Gaps = 10/298 (3%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
            +K++QD L D   L+++ +  D   I  +QE   ++ RI  ++E  Q   + S + D  
Sbjct: 69  MVKDLQD-LSD---LIKIVVHNDSLLINEIQEQLIHIDRILFQLEMCQ---MFSKKYDDC 121

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + Y+++ +G+GGTE+QDWANMLLRMY +W + + F  E +    G+ +GIKS T+ + GP
Sbjct: 122 NCYVDIQSGSGGTEAQDWANMLLRMYLKWIDNKGFNVEIVTESCGDFSGIKSTTIKVIGP 181

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             YGWL+ E G+HRLVR SP+D+  +RHTSF+S++VYP +DD+I+I+I   D RID YRA
Sbjct: 182 YVYGWLRTESGIHRLVRKSPFDATGKRHTSFASVFVYPELDDNIDIQIRPEDLRIDVYRA 241

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLY  EL K+   
Sbjct: 242 SGAGGQHVNRTESAVRITHIPTNIVTQCQSDRSQHKNKNQAIKQLKAKLYNFELHKKRIE 301

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             I E+ K +I WG QIRSYVL  +  +KDLRT +EK +   VL+GDLDDF+K ++ +
Sbjct: 302 KKIRENKKKDITWGNQIRSYVLD-HSRIKDLRTGLEKHNVKAVLNGDLDDFIKTSIKV 358


>gi|290580262|ref|YP_003484654.1| putative peptide chain release factor [Streptococcus mutans NN2025]
 gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025]
          Length = 325

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +Q+ L D   LL+  LEEDD S+  E  ++
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKLKYETFNSMQE-LSDETELLQEMLEEDD-SLQGELEED 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            + L+   G+EAGIKS  L  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VDVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIP+G+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +    V+DG+LD F+ A L
Sbjct: 301 VSQVDRVMDGELDGFIDAFL 320


>gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
 gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
          Length = 337

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/329 (45%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  +  +P  W + I A+   ++   L         +Q+   +  + LE+ LEEDD 
Sbjct: 5   IALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETELYLEM-LEEDDS 63

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
              +      +  K+   Y +   LLS   D ++A LE+H G+GGTE+QDWA+MLLRMY 
Sbjct: 64  IQEELEETLEKLDKIMTSY-EMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLLRMYQ 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RR
Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT  E      V+DGD++ F+ A L
Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331


>gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150]
 gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150]
          Length = 337

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 151/329 (45%), Positives = 209/329 (63%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  +  +P  W + I A+   +E   L         +Q+   +  + LE+ LEED  
Sbjct: 5   IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEM-LEEDSS 63

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
              +      +  K+   Y +   LLS   D N+A LE+H G+GGTE+QDWA+MLLRMY 
Sbjct: 64  VQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLLRMYQ 122

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RR
Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV 
Sbjct: 183 HTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY M
Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT  E      V+DGD++ F+ A L
Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331


>gi|27467454|ref|NP_764091.1| peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251810188|ref|ZP_04824661.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|293368216|ref|ZP_06614845.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27314997|gb|AAO04133.1|AE016745_232 peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251806240|gb|EES58897.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|291317639|gb|EFE58056.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 332

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 221/322 (68%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  W +  +A+ ++ +   L + ++   ++ + + D     EL  EE D  +  E  + 
Sbjct: 3   DPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELEEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+  FK
Sbjct: 63  VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S  V
Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242

Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++E E+A I    + +IGWG QIRSYV  PY M+KD RTN
Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMIKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DG++  F++A L
Sbjct: 302 EETGKVDAVMDGEIGPFIEAYL 323


>gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315]
 gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS315]
          Length = 326

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 209/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +Q+   +  +LLE+ L+EDD  + +E  +N
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDEDDF-LKEELEEN 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++       +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     FK
Sbjct: 61  LMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG+++ F+ A L
Sbjct: 301 LAQVDKVMDGEINGFIDAYL 320


>gi|191637822|ref|YP_001986988.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
 gi|190712124|emb|CAQ66130.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
          Length = 332

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 147/320 (45%), Positives = 209/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +   A+ ++     L         +++ L D     EL  +E D  + QE    
Sbjct: 3   EPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAGFELLQDEPDKDLQQEEEAK 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA++  FK
Sbjct: 63  IKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 VEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D+SIE+++   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q +RSQ +
Sbjct: 183 MPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQFQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NKA A  ML+AKLY+ E + +   A   +  + ++ +G QIRSYV  PY MVKD RTN E
Sbjct: 243 NKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             + + V+DGDL+ F+ A L
Sbjct: 303 TGNGNAVMDGDLNPFINAYL 322


>gi|332520510|ref|ZP_08396972.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
 gi|332043863|gb|EGI80058.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
          Length = 317

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 140/273 (51%), Positives = 202/273 (73%), Gaps = 8/273 (2%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           + L + ++   + +  +E  +F+++LS E DS  A L++ AGAGGTES DWA ML+RMY 
Sbjct: 36  ATLNDVTNRFTKAQTAIEDLEFKNMLSEEGDSLSAVLQITAGAGGTESCDWAQMLMRMYL 95

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +AEK  FK + L + +G+ AGIK+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++R
Sbjct: 96  MYAEKNNFKVKELNLQEGDVAGIKTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKR 155

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S++VYP+VDDSIEIEI+ +D  I T R+SGAGGQ+VN  ++ V++TH P+G+ + 
Sbjct: 156 HTSFASVYVYPLVDDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQIS 215

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQK----REEIANIGESSKTEIGWGRQIRSYVLQ 318
           C + RSQH N+++A  ML+++LYE+ELQK    RE+I    E++K +I WG QIR+YV+ 
Sbjct: 216 CSETRSQHDNRSRALQMLKSQLYEIELQKQLSQREDI----EAAKMKIEWGSQIRNYVMH 271

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY++VKD+RT  E  +   V+DGD+  F+K+ L
Sbjct: 272 PYKLVKDVRTGFESGNVDAVMDGDITPFLKSYL 304


>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
 gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
 gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
 gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
          Length = 371

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 157/355 (44%), Positives = 219/355 (61%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D   + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GE 300
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N   G+
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +   WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGNS---WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
 gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
          Length = 350

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 153/322 (47%), Positives = 214/322 (66%), Gaps = 4/322 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N   A+  + E   L N I  +  +  ++ D  +L+ELA E +D + ++E    
Sbjct: 3   EPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVEKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
              I+  +   + + LL+G  D  +A+L +++GAGGTES DWA+MLLRMY RW E+  FK
Sbjct: 63  YGVIQNGLAEFELKMLLNGPNDRYNAFLTINSGAGGTESCDWADMLLRMYQRWIERHGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           +E ++I  GEEAGIKS TL + G  A+G+L  E+GVHRLVRISP+D+N RRHTSF+ + V
Sbjct: 123 SEVMDIQLGEEAGIKSCTLKVAGEYAFGYLATERGVHRLVRISPFDANKRRHTSFAGVDV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + +S  IEI+E+D  +DTYR+ G GGQ+VN  ++AVRI HIPTG+V  CQ ERSQ K
Sbjct: 183 VPELPESAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVAACQNERSQQK 242

Query: 272 NKAQAWNMLRAKLYELELQK--REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           NK  A  ML+AKL ++E+ K   E  A  GE  K ++ +G QIRSYV QPYQ V DLRT 
Sbjct: 243 NKVTAMRMLQAKLQQIEVDKMAAETAAAYGE--KADVSFGSQIRSYVFQPYQKVLDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           ++ ++ S V+DGD+D F++  L
Sbjct: 301 VDTSNISAVMDGDIDAFIQGKL 322


>gi|226305794|ref|YP_002765754.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
 gi|259585230|sp|C0ZXD0|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
          Length = 368

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 158/353 (44%), Positives = 223/353 (63%), Gaps = 10/353 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L     + D +   +R+  L  +  DP LW +   A+ +  +  H    +  I  +
Sbjct: 12  LDTTLRTCESVVDVEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++RL +  IL ELA +E   ++    ++    ++ ++   + +++LSGE D  DA + + 
Sbjct: 72  RERLDEMPILYELAEDEGPDAVADADAERAS-LRDDIAAMEVKTMLSGEYDERDALINIR 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAG+KSAT  IKGP  YG L 
Sbjct: 131 SGAGGIDAADWAEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLS 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI+E+D R+D YR+SG GGQ 
Sbjct: 191 VEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEINENDIRVDVYRSSGPGGQS 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI---- 298
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  L ++++EE A +    
Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LAVKRQEERAEMDALK 308

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G+S  +   WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +
Sbjct: 309 GDSGSS---WGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGI 358


>gi|27904871|ref|NP_777997.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|27904269|gb|AAO27102.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 337

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 220/330 (66%), Gaps = 1/330 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  +N + + P  W++    K + +E+  L + ++ I +I + + + + +L L    + 
Sbjct: 5   RLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKIDNDVQELIDILNLENSNNI 64

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            SIL       + I+  +   +  S+  G+ D    Y+++ +G+GG E+QDWA+MLLRMY
Sbjct: 65  NSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQSGSGGVEAQDWASMLLRMY 124

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE +KFK + +E   GE  GIKSAT+ + G  A+GW + E G+HRLVR SP++++ R
Sbjct: 125 VRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFRTETGIHRLVRKSPFNAHHR 184

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSFSS++VYP++DD+I ++I+  D +ID YRASGAGGQHVN T+SAVRI H+PTG+VV
Sbjct: 185 RHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQHVNKTESAVRIRHLPTGIVV 244

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ +RSQHKNK QA   L+AKLYE  + +++    I E++K  IGWG QIRSY L   +
Sbjct: 245 QCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENNKLNIGWGHQIRSYTLDNSR 304

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +KDLRT +E  +   VLDG LD F++ +L
Sbjct: 305 -IKDLRTGVESKNIQSVLDGGLDLFVECSL 333


>gi|329667680|gb|AEB93628.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii DPC
           6026]
          Length = 332

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 209/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S+ 
Sbjct: 3   EPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELSEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A     K
Sbjct: 63  MVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHDLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN E
Sbjct: 243 NRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  + V+DG LD+F+ A L
Sbjct: 303 SSDVNGVMDGKLDNFIYAYL 322


>gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
          Length = 368

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 159/355 (44%), Positives = 222/355 (62%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  E D     E    L+ +K  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +  + 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|194337758|ref|YP_002019552.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194310235|gb|ACF44935.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 363

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 153/347 (44%), Positives = 228/347 (65%), Gaps = 5/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKEI-QDR 65
           N  GG+FD D   +++  L   + DP  W +   A  +++E  +H     ++ K I + R
Sbjct: 16  NSYGGIFDVDERKEKIEDLEKISFDPAFWNDQKAANKVLKELNEHKSWTDAYEKIILKAR 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
            C +    ++A+E DD S  +E +  +  I+ ++   +F+++LSG+ D+ +A + +HAGA
Sbjct: 76  SCQDE--FDIAIELDDESFGEELTALIASIEHDISAIEFKNMLSGKDDAGNAMITIHAGA 133

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E 
Sbjct: 134 GGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIEGPYAYGYLKAEN 193

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + D  + T+R+ G GGQ+VN 
Sbjct: 194 GVHRLVRVSPFDSNARRHTSFASVFTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNK 253

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY+ +  + +      E  K +
Sbjct: 254 VETAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQRDEEDARKREIEGKKKK 313

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           I WG QIRSYVL   + +KD RTN E+     VLDGDLD+FM+  L+
Sbjct: 314 IEWGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEKYLS 359


>gi|94987335|ref|YP_595268.1| protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731584|emb|CAJ54947.1| Protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 362

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 159/356 (44%), Positives = 220/356 (61%), Gaps = 14/356 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEIQDR 65
           +   GG+FD  +   RLS +      P  W N      +++E+  L+ + + F K     
Sbjct: 1   MKFFGGVFDQPSYKNRLSEIEKILSAPDAWSNPEALTPILKEKSQLEADNLRFEKL---H 57

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFES---------LLSGEADSN 115
           LC   ++    L ++  +  + +++ L+ +  LE++ K+F+          LL  E D  
Sbjct: 58  LCHTEMIDWFELVQEFLTTNESSTEFLEALTALELQVKKFQDAMEEAEMYLLLGAEEDKM 117

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           DA LE+H GAGGTE+QDWA ML RMY RWA+   F  E ++   G+EAGIKS TL I G 
Sbjct: 118 DAILEIHPGAGGTEAQDWAEMLERMYLRWADLHGFSKEEMDYLPGDEAGIKSVTLRISGE 177

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NAYG LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P   + + I+I +SD RID +R+
Sbjct: 178 NAYGLLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGEEVVIDIKDSDLRIDVFRS 237

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTT SAVRITHIPTG+V QCQ E+SQH NK  A  +LRA+LYE E++ R+  
Sbjct: 238 SGPGGQSVNTTSSAVRITHIPTGIVAQCQNEKSQHHNKESAMRILRARLYEQEIKLRDAA 297

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  K  I +G QIR+Y +QPY++VKD RTN E +    VL G +D F+ + L
Sbjct: 298 KQAQYMGKEAISFGSQIRTYTMQPYRLVKDHRTNCESSDVEAVLGGQIDKFINSYL 353


>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
 gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
          Length = 373

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 157/355 (44%), Positives = 219/355 (61%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D   + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 15  LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 75  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 135 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GE 300
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N   G+
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 314

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +   WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 315 GGNS---WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 366


>gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC
           13129]
 gi|76363349|sp|Q6NIM2|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae]
          Length = 369

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 157/351 (44%), Positives = 221/351 (62%), Gaps = 4/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + ++   R+  L  +  DP LW +   A+ +  E   +   +  +  
Sbjct: 11  QLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKLKKLST 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE + + L    + L  +  +VE  + +++LSGE DS +A + +
Sbjct: 71  LRQRIDDLPVMYELADEEGEDA-LALADEELAELTADVEALEVKTMLSGEYDSREAVINI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ I V PVV+ +  I+I +S+ R+D YR+SG GGQ
Sbjct: 190 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +G 
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D  ++A +
Sbjct: 310 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLLEAGI 358


>gi|32423703|gb|AAP81246.1| peptide chain release factor [Candidatus Portiera aleyrodidarum]
          Length = 297

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 151/295 (51%), Positives = 209/295 (70%), Gaps = 4/295 (1%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +K +++ + +N  LL LA+ E D   L     ++   + E+       L SG+ D N+AY
Sbjct: 1   MKTVENGIYNNAELLHLAITELDSKPLSFIKQDINFFEKELAKLDAVRLFSGDFDKNNAY 60

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG+GG ESQDWANMLLRMY+RWA    FKTE + ++ G+  G+KSATL IKG  A+
Sbjct: 61  VEIKAGSGGVESQDWANMLLRMYSRWAVTHDFKTETVNLNIGDLLGVKSATLHIKGDYAF 120

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASG 237
           GW++ E+G+HRLVR SP+DS+ RRHTSF+S++VYP +   +  I+I+ ++ RIDTYR+SG
Sbjct: 121 GWMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITMKVHNIKINTNELRIDTYRSSG 180

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIA 296
           AGGQHVNTTDSAVRITH+PT +VV+CQ ERSQH NK +A  +L+ KLY+ + +K E E  
Sbjct: 181 AGGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERI 240

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           NI E  K  I WG QIRSYVL   Q +KDLRT ++  +   VL+G+LD F++A++
Sbjct: 241 NI-EKKKAGICWGNQIRSYVLDA-QRIKDLRTGVKNNNCEKVLNGELDLFIEASI 293


>gi|189502408|ref|YP_001958125.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497849|gb|ACE06396.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 332

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 216/323 (66%), Gaps = 2/323 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K+  P  W+N  +A++++R  +   + I     ++  L +NL + +L  E  D     E 
Sbjct: 8   KSLAPDFWENTSQAEVILRNLKITKSWIDAFDHVES-LLENLEVTQLFYEAGDVD-ETEV 65

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
               Q +   +E  +   +L  E D N A +E++ GAGGTESQDWA ML RMY  W EK 
Sbjct: 66  EKAYQNLLTGLEALEVRKMLQNEEDENSAIIEINPGAGGTESQDWAEMLTRMYIMWGEKH 125

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  + L    G+ AG+KSATL I G  AYG+LK E G+HRLVRISP+D+  +RHTSF+S
Sbjct: 126 NYTVKELAYQRGDVAGVKSATLEITGTFAYGYLKSEIGIHRLVRISPFDAAGKRHTSFAS 185

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           I+VYPVV+++I+I+I+ +D   DT+RA GAGGQ+VN  ++AVR+ H P+G++V+CQQERS
Sbjct: 186 IYVYPVVENNIQIDINPADITWDTFRAGGAGGQNVNKVETAVRLKHAPSGIIVECQQERS 245

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A  +L++KLY+LEL KR       ESSK  I +G QIR+YVL PY++VKD RT
Sbjct: 246 QAQNKEKALRILKSKLYQLELDKRNAEKEKMESSKKRIDFGSQIRNYVLHPYKLVKDNRT 305

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           ++E +  S VL+G++D+F+KA L
Sbjct: 306 DVETSDTSGVLNGNIDEFIKAYL 328


>gi|254820379|ref|ZP_05225380.1| peptide chain release factor 2 [Mycobacterium intracellulare ATCC
           13950]
          Length = 370

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 164/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEREASDPQLWDDQTRAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       +   + ++ E+E  +  +LLSGE D  +A + 
Sbjct: 72  RGRLDDLPVLYELAAEEGEGAAEALAEADAELKALQAEIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVELFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + +
Sbjct: 252 QSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 308

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 361


>gi|227889611|ref|ZP_04007416.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|268319827|ref|YP_003293483.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
 gi|227849754|gb|EEJ59840.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|262398202|emb|CAX67216.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
          Length = 332

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 209/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S+ 
Sbjct: 3   EPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELSEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A     K
Sbjct: 63  MVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHDLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN E
Sbjct: 243 NRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  + V+DG LD+F+ A L
Sbjct: 303 TSDVNGVMDGKLDNFIYAYL 322


>gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM
           43017]
 gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora
           viridis DSM 43017]
          Length = 368

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 155/323 (47%), Positives = 211/323 (65%), Gaps = 2/323 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P LW +   A+ +  +  H   ++  + E++ R+ D  +L ELA  E D + L E    L
Sbjct: 42  PDLWNDPEVAQRVTSQLSHKQASLRKVSELRQRVDDLGVLHELAEAEGDKASLAEAEAEL 101

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            ++  +V   +  +LLSGE D  +A + + + AGG ++ DWA MLLRMY RWAE+  + T
Sbjct: 102 AQLTKDVNALEVRTLLSGEYDERNAVVTIRSEAGGVDAADWAEMLLRMYLRWAERHNYPT 161

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E  +I   EEAGI+SAT  I GP  YG L  EQG HRLVRISP+D+ +RR TSF+ + V 
Sbjct: 162 EIYDISYAEEAGIRSATFKISGPYLYGTLSVEQGTHRLVRISPFDNQNRRQTSFAHVEVL 221

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P V++   +EI E D R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N
Sbjct: 222 PEVEEIDHVEIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQN 281

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           KA A  +L+AKL  L+ +K EE A +     +   WG Q+RSYVL PYQ+VKDLRT+ E 
Sbjct: 282 KASAMKVLQAKL--LQRKKEEERAELDALRDSGSSWGNQMRSYVLHPYQLVKDLRTDYEV 339

Query: 333 TSPSDVLDGDLDDFMKATLAIKK 355
            +PS VLDG+LD F++A +  +K
Sbjct: 340 GNPSAVLDGELDGFLEAGIRWRK 362


>gi|295698346|ref|YP_003603001.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
 gi|291156977|gb|ADD79422.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
          Length = 369

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 144/286 (50%), Positives = 204/286 (71%), Gaps = 2/286 (0%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           IL+E   E+ D   L+ET  +L  ++  +E  +   L S E D  D Y+++ +G+GG +S
Sbjct: 83  ILIECLKEKRDEDFLKETYRDLFNVRSMIENLKIFRLFSKENDFCDCYIDLQSGSGGIDS 142

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLL+MY +W++ + F++  L    GE  GIKS+T++IKG  AYGWL+ E G+HRL
Sbjct: 143 QDWTSMLLKMYLKWSDLKNFRSYVLNTSYGEITGIKSSTIMIKGRYAYGWLRTETGIHRL 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR SP+DS+ RRHTSFSS++VYPV++D   EI I  SD +ID+Y++SGAGGQH N T+SA
Sbjct: 203 VRKSPFDSSGRRHTSFSSVFVYPVLEDPDQEIRIQSSDLKIDSYKSSGAGGQHTNKTESA 262

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITHIPTG+V QCQ  RSQHKNK QA   L+ KLYE++ ++++E   + E++K +I WG
Sbjct: 263 IRITHIPTGIVTQCQSNRSQHKNKEQALKQLKNKLYEIQKKEKQENQKVIENNKFDIAWG 322

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            QIRSY+L  +  VKDLRT IE+ +   VL+G +D F+KA L ++K
Sbjct: 323 NQIRSYIL-DHSRVKDLRTGIEERNVRSVLEGKIDKFIKANLILRK 367


>gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 331

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 209/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+ + ++   L +       +Q+   +  + LE+ LEEDD S+  +   +
Sbjct: 7   EPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEM-LEEDD-SVKDDLEAS 64

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + FK
Sbjct: 65  LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 124

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF S+ V
Sbjct: 125 VETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFVSVEV 184

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 185 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 244

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 245 NRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 304

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD++ F+ A L
Sbjct: 305 VAQVDKVMDGDIEGFIDAYL 324


>gi|331090528|ref|ZP_08339381.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405871|gb|EGG85399.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 337

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 155/326 (47%), Positives = 225/326 (69%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K E+P  W++   ++ +MRE + L + +   + +     D  +L+E+  E++D S++
Sbjct: 4   LQKKIEEPGFWEDTETSQKIMRELKGLQSFLENAESLLTSYEDIAMLIEMVYEDNDESMV 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    +++ +   E  +  +LLSG  D ++A + +HAGAGGTES DWA+ML RMY+RWA
Sbjct: 64  GEIRREIRQFEKNFEEIRINTLLSGPYDKDNAIVTLHAGAGGTESCDWASMLYRMYSRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ F    L+  DG+  GIK+ T  + G NAYG+L+ E+GVHRLVRISP++S  +R TS
Sbjct: 124 ERKGFSISVLDYLDGDITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSAGKRQTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S  V P ++D I+IEI+E D ++DTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ 
Sbjct: 184 FASCDVIPDIEDEIDIEINEDDLKVDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQN 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH N+ +A  ML+AKLY ++ Q++ +  +       EIG+G QIRSYV+QPY +VKD
Sbjct: 244 ERSQHSNREKAMQMLKAKLYLIKQQEQADKVSDIRGEVKEIGFGNQIRSYVMQPYTLVKD 303

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN+E  + + VLDGD++ F+ A L
Sbjct: 304 HRTNVENGNVTAVLDGDIEPFINAYL 329


>gi|237738152|ref|ZP_04568633.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
 gi|229420032|gb|EEO35079.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
          Length = 308

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 149/281 (53%), Positives = 201/281 (71%), Gaps = 1/281 (0%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+E  +E+ +    +E  +    +  +VE+     LL GE DSN+A + +H+GAGGTE+
Sbjct: 23  VLIEF-VEQGETDFQEELEEKHIILGKDVEHFDTRLLLDGEYDSNNAIVTIHSGAGGTEA 81

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+ML RMY+RW   +K+K   ++   G+  GIKS T +++G NA+G+LK E+GVHRL
Sbjct: 82  CDWADMLYRMYSRWCSDKKYKISEMDFMPGDSVGIKSITFMVEGMNAFGYLKSEKGVHRL 141

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N +RHTSF+S+ V P VDDSIE+ I  SD RIDTYRASGAGGQHVN TDSAV
Sbjct: 142 VRISPFDANKKRHTSFASVEVVPEVDDSIEVNIDPSDIRIDTYRASGAGGQHVNMTDSAV 201

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ+ERSQ  N+  A  +L++KL ELE++K+EE     +  +++IGWG 
Sbjct: 202 RITHFPTGIVVTCQRERSQLSNRETAMKLLKSKLIELEMKKKEEELKKLQGEQSDIGWGN 261

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYV QPY +VKD RTN E  +   V+DGD+D F+   L
Sbjct: 262 QIRSYVFQPYTLVKDHRTNCESGNIKAVMDGDIDIFINGYL 302


>gi|118467007|ref|YP_883159.1| peptide chain release factor 2 [Mycobacterium avium 104]
 gi|166225107|sp|A0QJS1|RF2_MYCA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118168294|gb|ABK69191.1| peptide chain release factor 2 [Mycobacterium avium 104]
          Length = 370

 Score =  299 bits (765), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 164/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       +   + ++ ++E  +  +LLSGE D  +A + 
Sbjct: 72  RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + +
Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 308

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 361


>gi|254776429|ref|ZP_05217945.1| peptide chain release factor 2 [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 370

 Score =  299 bits (765), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 164/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       +   + ++ ++E  +  +LLSGE D  +A + 
Sbjct: 72  RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + +
Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 308

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 361


>gi|257125766|ref|YP_003163880.1| peptide chain release factor 2 [Leptotrichia buccalis C-1013-b]
 gi|257049705|gb|ACV38889.1| bacterial peptide chain release factor 2 (bRF- 2) [Leptotrichia
           buccalis C-1013-b]
          Length = 364

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 167/351 (47%), Positives = 225/351 (64%), Gaps = 20/351 (5%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLW---------QNVIEAKMLMRERQHLDNAISFIKEIQD 64
            D +N    +  L  +T +P  W         +N+   K ++ E  +L+     +  I  
Sbjct: 24  LDLENLKIEIENLEKQTFEPDFWNAENSQEILKNISAKKKMLEEYDNLNGLFEDVSTI-- 81

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
                   +E  +E  D S   E     ++++ E++  + + LL  E D+N+A L +++G
Sbjct: 82  --------IEF-IEMGDNSFENELEQKAKKLENEIDNFKTKLLLDEEYDTNNAILTINSG 132

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+ DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IKG  AYG+LKGE
Sbjct: 133 AGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKGSYAYGYLKGE 192

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHRLVRISP+DSN+RRHTSF+++ V P ++D +EI I   D +IDTYRASGAGGQHVN
Sbjct: 193 KGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVEINIRTEDLKIDTYRASGAGGQHVN 252

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE+     + +++
Sbjct: 253 TTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTES 312

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +I WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 313 KIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYSK 363


>gi|164687096|ref|ZP_02211124.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
 gi|164603981|gb|EDQ97446.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
          Length = 349

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 143/274 (52%), Positives = 202/274 (73%), Gaps = 2/274 (0%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           SI  +   ++++++ +++  + ++LL+G+ D N+A L ++AG GG ++QD A M+LRMY 
Sbjct: 73  SIEHDIEKSIKKLEDKIDEVKIKTLLNGKYDVNNAVLSINAGTGGLDAQDCAQMILRMYL 132

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWA++  FK + L++    EAGIKS TLLI+G NAYG+LK E+GVHR+VRISP+D++ +R
Sbjct: 133 RWADQNNFKVKTLDMISDPEAGIKSVTLLIQGTNAYGYLKSEKGVHRIVRISPFDASGKR 192

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S+ V P +DD I++EI+ +D +IDTYR+SGAGGQHVN TDSAVRITHIPTG+VVQ
Sbjct: 193 HTSFVSVDVTPELDDKIDVEINPNDLKIDTYRSSGAGGQHVNKTDSAVRITHIPTGIVVQ 252

Query: 263 CQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           CQ ERSQ  NK  A  ML+ KL  L EL+ +E I +I +   ++I WG QIRSYV QPY+
Sbjct: 253 CQNERSQFANKDTAMKMLKGKLIHLKELENKERIEDI-QGKYSQITWGSQIRSYVFQPYK 311

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +VKD RTN E  +   V+DG+++ F+   L + K
Sbjct: 312 LVKDHRTNAEIGNVDSVMDGNINLFINEYLKMNK 345


>gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC
           53653]
          Length = 370

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 162/355 (45%), Positives = 225/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  +L   +   +E+
Sbjct: 13  LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L  ++  V+  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAADEGDEDARAEAEAELNAVRKAVDEMEVRTLLSGEYDAREAVVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEIYETSYAEEAGIKSTTFAVQIPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ RID YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRIDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +N+A A N+L+AKL  L+ +++EE A + ++ 
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVLQAKL--LDRRRQEEQAKM-DAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG+LD F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 364


>gi|120436153|ref|YP_861839.1| peptide chain release factor 2 [Gramella forsetii KT0803]
 gi|117578303|emb|CAL66772.1| peptide chain release factor 2 [Gramella forsetii KT0803]
          Length = 333

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 231/330 (70%), Gaps = 6/330 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--DRLCDNLILLELALEEDDCS 83
           +  KT  P  W +  +A+ +M+E   ++   S++ + +  + L ++L ++    +ED+ +
Sbjct: 1   MEEKTFAPDFWDDPKKAEQIMKE---VNAEKSWVGDYEKAETLVEDLEVIYDFYKEDEAT 57

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
                  N + ++L +E  +F+++LS E DS  A L++ AGAGGTES DWA ML+RMY  
Sbjct: 58  AEDVQQRNDKAVEL-IEDLEFKNMLSEEGDSMSAVLQITAGAGGTESCDWAEMLMRMYLM 116

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAEKRK+K   L    G+ AGIK+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RH
Sbjct: 117 WAEKRKYKIRELNYQAGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRH 176

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S ++YP+VDDSIEI+I+ SD   +T R+SGAGGQ+VN  ++AVR+ H PTG+V++ 
Sbjct: 177 TSFASAYIYPLVDDSIEIDINPSDLSWETMRSSGAGGQNVNKVETAVRLRHEPTGIVIEN 236

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
            + RSQ +NK +A  +L+++L+E+ELQK++E     E SK +I WG QIR+YV+ PY++V
Sbjct: 237 SETRSQLENKNKAMQLLKSQLFEIELQKKQEQRREIEDSKMKIEWGSQIRNYVMHPYKLV 296

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KD+RT  E  +  DV++G++D F+K+ L +
Sbjct: 297 KDVRTAEETGNVDDVMNGNIDAFLKSFLMM 326


>gi|296122601|ref|YP_003630379.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
 gi|296014941|gb|ADG68180.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
          Length = 372

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 155/342 (45%), Positives = 224/342 (65%), Gaps = 4/342 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+D    R++ +N     P  W +  +A+ L+ E ++++ ++  ++E+ D   +  +L 
Sbjct: 23  LDYDQWQARVAEINEAMSAPDFWDHQEKAQALVTELRNVNGSLKPLQELIDGTEELAVLR 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E   E+D      E    L  ++ + +  + ++++S   D   AYL++ AG GGT++ DW
Sbjct: 83  EFLAEDDSSESRDEMVGLLASLQEKFQQVELKAMMSRPEDPCSAYLQIQAGEGGTDASDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRWAE R F+TE +EI + EEAGI++ATL I+G   YG L+GE GVHRL+RI
Sbjct: 143 AAMLLRMYTRWAEDRGFETELIEISEAEEAGIRNATLAIRGEYVYGLLRGETGVHRLIRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI---DTYRASGAGGQHVNTTDSAV 250
           SP+D   RR TSF+++ V P  DD+I+I+I+  D +I   D +RASGAGGQHVN T SA+
Sbjct: 203 SPFDGAGRRQTSFAAVDVIPEPDDTIDIDINWEDPKIIREDIFRASGAGGQHVNKTSSAI 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PT  VVQCQ ERSQHKN++    ML AKL +LE  KRE  A      K++IG+G 
Sbjct: 263 RLTHLPTNTVVQCQNERSQHKNRSWCRKMLVAKLLQLETVKRENEAAHKRGQKSKIGFGG 322

Query: 311 Q-IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + IR+YVL P Q VKD RTN++  +P  VLDG +D+F++A L
Sbjct: 323 ETIRNYVLNPEQFVKDTRTNLKVGTPMPVLDGRIDEFLEAYL 364


>gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
 gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
          Length = 324

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 153/318 (48%), Positives = 216/318 (67%), Gaps = 3/318 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W N+ +A+ + ++ + + + I    +++ ++ D  +L E+ +E+DD     E    L+ 
Sbjct: 6   FWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEI-MEDDDEESANEIIQTLRD 64

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+ +++    + LL GE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ +  E 
Sbjct: 65  IQAQIDDYNMKVLLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQGYSIET 124

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L++  G+EAGIKS TL + G  AYG+LK E+G+HRLVRISPY++N +R TSF+S+ V P 
Sbjct: 125 LDLLPGDEAGIKSVTLKVTGEYAYGYLKAEKGIHRLVRISPYNANGKRQTSFASMEVLPE 184

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +    +IEI   D +IDTYR+ GAGGQHVN TDSAVRITHIPTGVVVQCQ ERSQ  N+ 
Sbjct: 185 LTKEQDIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVVQCQNERSQFSNRD 244

Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML++KL EL E   +E+I ++    K ++GWG QIRSYV  PY MVKD RTN+E +
Sbjct: 245 TAMEMLKSKLVELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303

Query: 334 SPSDVLDGDLDDFMKATL 351
           + + V+DG++D F+ A L
Sbjct: 304 NVTSVMDGEIDMFINAYL 321


>gi|153854560|ref|ZP_01995830.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
 gi|149752869|gb|EDM62800.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
          Length = 312

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 154/306 (50%), Positives = 215/306 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E ++L   +  I  +     D  +L+E+  E++D ++++E  + +   +   E  + +
Sbjct: 1   MKELKNLKELVETIHGLYTSYEDINLLIEMGYEDEDPAMVKELEEEIHTFEKVFEKLKIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA ML RMY RWAE++ F  + L+  DG+ AGI
Sbjct: 61  TLLSGEYDACNAIMTIHAGAGGTESCDWAGMLYRMYCRWAERKGFSLQVLDFLDGDIAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  +KG NAYG+LK E+GVHRLVRISP++S  +R TSF+S  V P ++D I+IEI E
Sbjct: 121 KAVTFEVKGENAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVLPDLEDDIDIEIDE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+AKL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       +IG+G QIRSYV+QPY +VKD RTN E ++ + V+DGD+D 
Sbjct: 241 LMKEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNEENSNVNAVMDGDIDS 300

Query: 346 FMKATL 351
           F+ A L
Sbjct: 301 FINAYL 306


>gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 369

 Score =  298 bits (764), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 159/356 (44%), Positives = 221/356 (62%), Gaps = 9/356 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNA 55
           ++  L  L G  +   AV  L  L  +  D       P LW +   A+ +     H +  
Sbjct: 5   VAADLKDLAGTLENIEAVVDLPALRVEIADLEEQAGQPDLWNDTETAQKVTSRLAHANGE 64

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  +++++ RL D  +L ELA +E D S + +   +   ++ E+E  +  +LLSGE D  
Sbjct: 65  LRRVEDLRRRLDDLPVLYELAEDEGDESAIADADRDRVALRAEIESLEVRTLLSGEYDER 124

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + + + AGG ++ D+A ML+RMY RWAE+  +  +  +    EEAGIKSAT  +  P
Sbjct: 125 EALVTIRSEAGGVDAADFAEMLMRMYLRWAERHGYGVDVYDTSYAEEAGIKSATFQVHAP 184

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E D R+D YR+
Sbjct: 185 YAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESTDHIDIDEKDLRVDVYRS 244

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL  LE +++EE 
Sbjct: 245 SGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQAKL--LERKRQEER 302

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           A +     T   WG Q+RSYVL PYQMVKDLRT+ E  +P  VLDGD+D F++A +
Sbjct: 303 ALMDSLKDTGSSWGNQMRSYVLHPYQMVKDLRTDFEVGNPGAVLDGDIDGFIEAGI 358


>gi|153005568|ref|YP_001379893.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
 gi|152029141|gb|ABS26909.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
          Length = 309

 Score =  298 bits (764), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 145/270 (53%), Positives = 193/270 (71%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L ELA E  D +  QE +   + +  ++E  +F+ +LSGE D   A +EV
Sbjct: 8   VRRSLDDAEALAELADEARDEATRQEAAQQCEVVAKDLEALEFQKMLSGEHDRAGAIVEV 67

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG E+ DWA ML RMYTR+ E+R +  E  ++  GEEAGI  A+ + +G  AYG+L
Sbjct: 68  KSGAGGVEAMDWAAMLYRMYTRYCERRGWSVEPADLVAGEEAGISQASFIARGEFAYGFL 127

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D  +RR TSF+++ V P ++D I ++I E+D RIDTYR+SGAGGQ
Sbjct: 128 KAERGVHRLVRISPFDQAARRQTSFAAVDVTPEIEDDIVVDIKEADVRIDTYRSSGAGGQ 187

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VN TDSAVR+TH+PTG+VV  Q ERSQ KN+  AW +LRAKLYELE +KR E  +  E+
Sbjct: 188 KVNKTDSAVRLTHLPTGIVVAVQNERSQQKNRGVAWKILRAKLYELEEKKRAEARDAVEA 247

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +K +I +G QIRSYVLQPY+MVKDLRT +E
Sbjct: 248 TKKDIDFGSQIRSYVLQPYRMVKDLRTGVE 277


>gi|237740862|ref|ZP_04571343.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
 gi|229431159|gb|EEO41371.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
          Length = 331

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 151/322 (46%), Positives = 220/322 (68%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           T + + W +  ++  +++      N +S  +++   + D  +L++  +E  + S   E  
Sbjct: 5   TFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQ 63

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  +   LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW   + 
Sbjct: 64  TKHKILKSDIEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKG 123

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+
Sbjct: 124 YKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASV 183

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ
Sbjct: 184 EVVPEVDENVEVEINPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQ 243

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD RTN
Sbjct: 244 LSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTN 303

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  +   V+DG +DDF+ + L
Sbjct: 304 TEIGNVKAVMDGSIDDFINSYL 325


>gi|302190497|ref|ZP_07266751.1| peptide chain release factor 2 [Lactobacillus iners AB-1]
          Length = 332

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 149/315 (47%), Positives = 205/315 (65%), Gaps = 6/315 (1%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
           Q +IEA   MRE+      +   + +   L D    +EL   E +  +L E +  ++++K
Sbjct: 14  QKIIEATNYMREK------VDKYQTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLK 67

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
            E    +   LLSG+ D ++A LE+H+GAGGTE+ DWANML RMY RW +      E  +
Sbjct: 68  NEFNNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDD 127

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
              G+EAG+KS ++ ++G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D
Sbjct: 128 FQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEID 187

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            SI IEI+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A
Sbjct: 188 KSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETA 247

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
            +MLRAKL++LE  K+ +     + ++ EI +G QIRSYV  PY MVKD RT+ E +   
Sbjct: 248 MDMLRAKLFKLEEDKKRKQTEALKGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTI 307

Query: 337 DVLDGDLDDFMKATL 351
            V++G+LD F+ A L
Sbjct: 308 GVMNGNLDPFIYAYL 322


>gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
 gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
          Length = 336

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 209/331 (63%), Gaps = 2/331 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ ILL+  L ED
Sbjct: 3   EEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDF-LAED 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    +      +  K    Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRM
Sbjct: 62  DSVKEELIEKLEELDKRMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+     FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V
Sbjct: 181 RRHTSFTSVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V    +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY
Sbjct: 241 VASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPY 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            MVKD RTN E      V+DGD+D F+ A L
Sbjct: 301 TMVKDHRTNYEVAQVDKVMDGDIDGFIDAYL 331


>gi|237743972|ref|ZP_04574453.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|256027415|ref|ZP_05441249.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|289765378|ref|ZP_06524756.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|229433003|gb|EEO43215.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|289716933|gb|EFD80945.1| peptide chain release factor 2 [Fusobacterium sp. D11]
          Length = 308

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 151/298 (50%), Positives = 211/298 (70%), Gaps = 1/298 (0%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           N +S  +++   + D  +L++  +E  + S   E S+  + +K +VE  +   LL GE D
Sbjct: 6   NIVSRYEKLATEIEDEEVLIDF-VESGETSFESELSEKHKILKNDVEEFEINLLLDGEYD 64

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L++
Sbjct: 65  MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVTELDFMEGDSVGVKSVTFLVE 124

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI  +D RIDTY
Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEIDPADIRIDTY 184

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+E
Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKKE 244

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L
Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302


>gi|163754877|ref|ZP_02161998.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
 gi|161324944|gb|EDP96272.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
          Length = 316

 Score =  298 bits (764), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 143/291 (49%), Positives = 210/291 (72%), Gaps = 2/291 (0%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+ D + D  +L E   E D     +E +   ++ K ++E  +F ++LS E DS  A L+
Sbjct: 16  EVADLIGDLEVLYEFYKEGDASE--EEVTAQFEKTKTKIEDLEFRNMLSDEGDSMSAVLQ 73

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V AGAGGTES DWA+ML+RMY  +AEK+ +K + L   +G+ AGIK+ TL I+G  A+GW
Sbjct: 74  VTAGAGGTESCDWASMLMRMYLMFAEKQGYKVKELNYQEGDVAGIKTVTLEIEGDYAFGW 133

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D  I T R+SGAGG
Sbjct: 134 LKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADIEITTARSSGAGG 193

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++ V++TH P+G+ + C + RSQH N+ +A  ML+++LYE+EL+K+ E  +  E
Sbjct: 194 QNVNKVETKVQLTHKPSGIQISCSETRSQHDNRTRAMQMLKSQLYEIELKKQMEARDDIE 253

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K +I WG QIR+YV+ PY++VKD+RT  E  +   V++G +D+F+KA L
Sbjct: 254 AGKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGYIDEFLKAYL 304


>gi|261417352|ref|YP_003251035.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373808|gb|ACX76553.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 368

 Score =  298 bits (763), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 152/355 (42%), Positives = 233/355 (65%), Gaps = 9/355 (2%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +++ L G  D +   + L  L   + DP+LW +  +A+ +M++  +L   I   K
Sbjct: 11  IELRSRIDKLWGYLDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWK 70

Query: 61  EIQDRLCDNLI-LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           E+  + CD+L  L E++ +E+   +      ++  +K  VE  +F+ +L+G  D+    +
Sbjct: 71  EVS-QTCDDLAELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLM 129

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +H GAGGTESQDWA ML RMYT + E+ K   + ++  + E+AG+KSAT+ +   NAYG
Sbjct: 130 SIHPGAGGTESQDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYG 189

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVRISP+D+N+RRHTSF+++++YP  +D +E ++  S+ R+DTYR+SGAG
Sbjct: 190 LLRSEIGVHRLVRISPFDANARRHTSFTAVYLYPEHED-VEFDLDMSEVRVDTYRSSGAG 248

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR---AKLYELELQKREEIA 296
           GQ++N TDSAVR+TH+PTG++  CQ ERSQ +N+   + ML+   A+ Y LE + + + A
Sbjct: 249 GQYINKTDSAVRMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRD-A 307

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + E  K E  WG QIRSYVLQPYQ+VKDLRT +E +  + VLDG +  F+ A L
Sbjct: 308 RMAEKKKVE--WGSQIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 360


>gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 372

 Score =  298 bits (763), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 153/329 (46%), Positives = 213/329 (64%), Gaps = 4/329 (1%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED--DC 82
           F N  TE    W + ++A+ ++ E   L N       +  +  +  +L+E+ L ED  D 
Sbjct: 36  FENRMTE-SGFWDDNVKAQKIIEENNVLKNRRDSFLNLTSQAEEIDLLIEM-LSEDVTDS 93

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            ++ E  +++ + + ++E    E LL+   D+N+A LEVH G+GGTES DW   L RMYT
Sbjct: 94  EMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYT 153

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+L+ E+GVHR VRISP+DS  RR
Sbjct: 154 RWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRFVRISPFDSAGRR 213

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S+ V P +DD+I+IEI + D ++D +R+ GAGGQ+VN   + VR+TH PTG+VV 
Sbjct: 214 HTSFVSVDVMPELDDTIDIEIRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVS 273

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
              ER+Q+ N+  A  +L+ KLY+LEL+K+E         K E GWG QIRSYVL PYQM
Sbjct: 274 STVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGDKLENGWGSQIRSYVLHPYQM 333

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT+ E   P  VLDGDLD F+ A L
Sbjct: 334 VKDHRTDYETNQPQQVLDGDLDPFINAYL 362


>gi|116629958|ref|YP_815130.1| protein chain release factor B [Lactobacillus gasseri ATCC 33323]
 gi|238854078|ref|ZP_04644428.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282851440|ref|ZP_06260805.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311110410|ref|ZP_07711807.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
 gi|116095540|gb|ABJ60692.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833312|gb|EEQ25599.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282557408|gb|EFB63005.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311065564|gb|EFQ45904.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
          Length = 332

 Score =  298 bits (763), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 209/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +A+ L+ E   +       K ++++  D    LEL   + D  + +E S  
Sbjct: 3   EPGFWDDQEQAQSLINETNRMKEKSENFKRLEEKFEDAQTALELLKADPDPELSEELSKE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A     K
Sbjct: 63  MFSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHNLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEIEDYEPGEEAGVKSVSVRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A NMLRAKL++LE +K+++     + ++ EIG+G QIRSYV  PY MVKD RTN E
Sbjct: 243 NRETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  + V+DG LDDF+ A L
Sbjct: 303 TSDVNGVMDGKLDDFIYAYL 322


>gi|268316864|ref|YP_003290583.1| LigA [Rhodothermus marinus DSM 4252]
 gi|262334398|gb|ACY48195.1| LigA [Rhodothermus marinus DSM 4252]
          Length = 371

 Score =  298 bits (763), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 154/356 (43%), Positives = 227/356 (63%), Gaps = 7/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ LG   D     ++++ LN +   P  W N   A+ + ++    ++ ++  +++
Sbjct: 8   LLERVDTLGRFLDIPGRKEKIAKLNEERLAPGFWDNPERAREVEKQIAEEESWVAAWEQL 67

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  D   LLEL  EE D ++ +E +  + R++ +++  +  SLL+   D  +A L +H
Sbjct: 68  RRQADDVQTLLELQQEEPDANLEEEIAREVARLEQQLDELELRSLLTDPDDHRNAILTIH 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMYTRW E+  +  E LE   G+ AGIKSATL I GP AYG+LK
Sbjct: 128 PGAGGTESQDWAEMLLRMYTRWGERHGYDVELLEYQAGDVAGIKSATLRIAGPYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+D++ RRHTSF+S++VYP +DDSIE++I   +  + T+R+ G GGQ+
Sbjct: 188 GESGVHRLVRISPFDASGRRHTSFASVFVYPEIDDSIEVDIRPDEIEMQTFRSGGKGGQN 247

Query: 243 VNTTDSAVRIT---HIPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           VN  ++ VR+     +  G    VV +C +ERSQ +N+ +A  ML++++Y+LE + RE  
Sbjct: 248 VNKVETGVRLIWHGKLSNGEEARVVAECTEERSQLQNRQRALTMLKSRIYQLEREIREAE 307

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               ES K +I WG QIRSYV QPY MV D RT  + T    V+DGDLD F++A L
Sbjct: 308 KRKRESQKKKIEWGSQIRSYVFQPYTMVNDHRTETKVTDVQAVMDGDLDPFIRAYL 363


>gi|225624841|gb|ACN96555.1| PrfB [Francisella noatunensis subsp. orientalis]
          Length = 294

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 153/287 (53%), Positives = 203/287 (70%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEED--ESLIQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ + F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGW + E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVL 288


>gi|47558936|gb|AAT35568.1| protein release factor 2 [Chlamydia trachomatis]
          Length = 368

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 157/323 (48%), Positives = 209/323 (64%), Gaps = 9/323 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +V  A  +      L   +S   E+++++      ++  LE+++ S   E    L++
Sbjct: 44  FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99

Query: 95  IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             +  E K  E     LLSGE D +  +L ++AGAGGTES DW  M+LRMY RWA    +
Sbjct: 100 EFVFCERKITEWETLRLLSGELDRSSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 159

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           + E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ 
Sbjct: 160 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV  Q ERSQ 
Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSRQNERSQI 279

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+RT  
Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
           E  +   ++DG+ LD F+KA L 
Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362


>gi|195973776|gb|ACG63453.1| peptide chain release factor 2 [Francisella noatunensis]
          Length = 294

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 152/287 (52%), Positives = 203/287 (70%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+   R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNFGRQKVELENIVHNCEHISETLETLTELLELAEED--ESLMQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK   L I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCALKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288


>gi|42518772|ref|NP_964702.1| peptide chain release factor 2 [Lactobacillus johnsonii NCC 533]
 gi|41583058|gb|AAS08668.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii NCC
           533]
          Length = 332

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 149/320 (46%), Positives = 209/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S+ 
Sbjct: 3   EPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELSEE 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A     K
Sbjct: 63  MVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAVSHDLK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG++   Q +RSQ +
Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIITSSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN E
Sbjct: 243 NRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  + V+DG LD+F+ A L
Sbjct: 303 TSDVNGVMDGKLDNFIYAYL 322


>gi|253581892|ref|ZP_04859116.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
 gi|251836241|gb|EES64778.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
          Length = 328

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 216/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           T +   W +   +  +++E       I+  K+++  + +  +L++  +E  +     E  
Sbjct: 2   TMEESFWNDKRSSSAVIKEMNEEKEIIAEFKKLESEVGEEEVLIDF-VEMGETDFQAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +    +  ++++     LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++K
Sbjct: 61  EKHMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKK 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+
Sbjct: 121 YKISEMDFMPGDSVGIKSITFLVEGSNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VD+S+E+ +   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ
Sbjct: 181 EVMPEVDESVEVNVDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT 
Sbjct: 241 LNNRETAMKMLKSKLIELEMKKKEEELKKIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTA 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  +   V+DGD+D F+   L
Sbjct: 301 AESGNIKAVMDGDIDIFINTYL 322


>gi|322385191|ref|ZP_08058838.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
 gi|321270815|gb|EFX53728.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
          Length = 325

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++ +   ++ ILL+  L EDD    +     
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDDSVQEELEEKL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +  K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 62  TELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
 gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
          Length = 371

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 156/355 (43%), Positives = 218/355 (61%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D     + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHTPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GE 300
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N   G+
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQEKMNALKGD 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +   WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGNS---WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|319954923|ref|YP_004166190.1| bacterial peptide chain release factor 2 (brf-2) [Cellulophaga
           algicola DSM 14237]
 gi|319423583|gb|ADV50692.1| bacterial peptide chain release factor 2 (bRF-2) [Cellulophaga
           algicola DSM 14237]
          Length = 366

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 157/351 (44%), Positives = 227/351 (64%), Gaps = 7/351 (1%)

Query: 7   LNCLGGL---FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           L+ LG L    D D  +  +     KT  P  W N  +A+  M+  Q     +   K  +
Sbjct: 12  LDRLGALRRYLDVDAKLIEIENEQEKTLAPDFWDNPQKAQEHMKYIQSKKKWVDDYKTSE 71

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVH 122
               D  +L+E    + + +I +E  +      L+ +E  +F+++LS E D   A +++ 
Sbjct: 72  TLANDLEVLIEF---QKEGAITEEEVEKQYTKTLDTIENLEFKNMLSEEGDELPAIIQIT 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  W+EK+ FK + L   +G+  GIK+ TL I G  ++GWLK
Sbjct: 129 AGAGGTESCDWAAMLMRMYMMWSEKKGFKIKELNYQEGDVTGIKTVTLEIDGEFSFGWLK 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D  I T R+SGAGGQ+
Sbjct: 189 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIAINPADIDITTARSSGAGGQN 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH P+G+ + C   RSQH+N+A A  ML+++LYE+EL+K+ E     ESS
Sbjct: 249 VNKVETKVQLTHKPSGIQISCSDSRSQHENRATALKMLKSQLYEIELRKKMEARQEIESS 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DGD+D F+KA L +
Sbjct: 309 KMKIEWGSQIRNYVMHPYKLVKDVRTATETGNVDAVMDGDIDKFLKAFLMM 359


>gi|195973772|gb|ACG63451.1| peptide chain release factor 2 [Francisella noatunensis subsp.
           orientalis]
          Length = 294

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 153/287 (53%), Positives = 203/287 (70%), Gaps = 2/287 (0%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L R++  L+N +   + I + L     LLELA E+   S++QE + 
Sbjct: 4   EDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEED--ESLIQEIAK 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + Q +  E+E  +F  + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ + F
Sbjct: 62  DTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K    ++ DG+ AGIK  TL I+G  AYGW + E G+HRLVR SP+DSNS+RHTSF+S++
Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFASVF 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH
Sbjct: 182 ISPEVDDDIDIEINPADXRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           KN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL
Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVL 288


>gi|225568858|ref|ZP_03777883.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
 gi|225162357|gb|EEG74976.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
          Length = 312

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 155/306 (50%), Positives = 214/306 (69%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L   +  I  + D   D  +L+E++ EE+D S ++E    +Q  + + E  +  
Sbjct: 1   MKELKDLQELVKTIHSLYDGYEDINLLIEMSYEENDASAVKEMEAEIQSFEEQFEALRIR 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA ML RMY+R+AE++ +  E L+  DG+  GI
Sbjct: 61  TLLSGEYDACNAIVTIHAGAGGTESCDWAGMLYRMYSRFAERKGYSMEVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  +KG NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IEI++
Sbjct: 121 KTVTFEVKGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+ KL 
Sbjct: 181 EELKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHFNKEKAMQMLKVKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY MVKD RTN E ++ + VLDG +D 
Sbjct: 241 LLKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNEECSNVTAVLDGGIDM 300

Query: 346 FMKATL 351
           F+ A L
Sbjct: 301 FINAYL 306


>gi|304407676|ref|ZP_07389327.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
 gi|304343159|gb|EFM09002.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
          Length = 329

 Score =  297 bits (761), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 161/321 (50%), Positives = 218/321 (67%), Gaps = 4/321 (1%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ ++ E   + + +   +++     D   +LE+  EE D S   E ++ +
Sbjct: 4   PDFWDDNDKAQAVISEMNAVKSTVEKYEKLAGDHDDLSTMLEMVEEEGDDSFESELTEGV 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           + +   +   +   LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEK  FK 
Sbjct: 64  ESLVKRISDFELTLLLNQPYDKLNAILELHPGAGGTESQDWGQMLYRMYTRWAEKSGFKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+   G+EAGIKS T+ IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V 
Sbjct: 124 ELLDYLPGDEAGIKSVTISIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P ++D IEIEI   D ++DTYRASGAGGQHVN T+SA+RITHIP+G++V CQ +RSQ +N
Sbjct: 184 PEIEDDIEIEIRTEDLKVDTYRASGAGGQHVNKTESAIRITHIPSGIIVACQTQRSQIQN 243

Query: 273 KAQAWNMLRAKLYELELQKREE-IANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           + QA  MLR+KLYE +++++++ +A I GE S  +I WG QIRSYV  PY MVKD RT++
Sbjct: 244 REQAMKMLRSKLYERKIEEQQKHLAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTSV 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   V+DGDLD F+   L
Sbjct: 302 ETGNVGAVMDGDLDAFIDGYL 322


>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
 gi|123751448|sp|Q2JEW7|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
          Length = 366

 Score =  297 bits (761), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 155/350 (44%), Positives = 218/350 (62%), Gaps = 4/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R   L  +  DP LW +   A+ + R        I+ ++ 
Sbjct: 11  QLDATLTGIETVLDVEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D    +  A +  D  +L E + +L R+  ++   +  +LLSGE D  DA +++
Sbjct: 71  LRRRLDD----IAAAADLGDEDLLAEAAADLPRLSSDIAGLEVRTLLSGEYDERDAIVQL 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L
Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  ++I + D RID +R+SG GGQ
Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++ +G QIR+YVL PYQMVKDLRT+ E ++ S VLDG+LDDF+ A +
Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEI 356


>gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
 gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
          Length = 378

 Score =  297 bits (761), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 158/346 (45%), Positives = 218/346 (63%), Gaps = 2/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L    D D   +R+  L+   E+P  W +  +A  L  E +HL + +     ++   
Sbjct: 18  LQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEARHLKDELEGFTALKGNY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L+++  EE+D S++ E  + L      ++      LLSGE DS +  L ++AGAG
Sbjct: 78  EDIEALIQMGKEENDDSVIPEIRELLDSFSERLDQMNTTLLLSGEYDSMNVILRLNAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DWA +L RMYTRWAE+  F  + L+  DG+EAGIKS T+ + G  AYG+L+ E G
Sbjct: 138 GTEANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKSVTMEVVGEYAYGYLRSESG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+++  +R TSF S  V P ++  I+IEI E D +++ +RASGAGGQH+N T
Sbjct: 198 IHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEIREEDIKMEVFRASGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTE 305
            SAVR+ HIPTG V  CQ+ERSQ +NK +A  ML+ KLY  E +++E ++A I    K  
Sbjct: 258 SSAVRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAGIRGEVKDN 317

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            GWG QIRSYVLQPY+MVKDLRT  E  +   VLDGD+D F+ A L
Sbjct: 318 -GWGSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRFISAYL 362


>gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421]
 gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421]
          Length = 354

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/339 (43%), Positives = 218/339 (64%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      R++ L  +   P  W +   A+  ++   +L   +      ++ L D  ++
Sbjct: 10  IFDVAQRQIRIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAEVV 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL  E  D S+L E   N++ +  E++  + E LLSG  D   A L ++AGAGGT++QD
Sbjct: 70  LELVQETGDESLLPEAEGNIEALVGELDRWELEQLLSGPYDERGAILSINAGAGGTDAQD 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWAE++ ++   LE+ +GEEAG+KSATL I G  AYG+L  E+G HRLVR
Sbjct: 130 WAEMLLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRLVR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V PV+DDS++++I   D  IDT+R+ G GGQ+VN  ++ VR+
Sbjct: 190 ISPFNANDKRQTSFAGVEVMPVLDDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGVRV 249

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH PTG+ V+C QER+Q +N+ +A  ML+A+L  LE +KR++  +       +  WG QI
Sbjct: 250 THKPTGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGNQI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV  PYQMVKDLRT  E +  + V++G ++ F++  L
Sbjct: 310 RSYVFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYL 348


>gi|313679114|ref|YP_004056853.1| bacterial peptide chain release factor 2 (brf-2) [Oceanithermus
           profundus DSM 14977]
 gi|313151829|gb|ADR35680.1| bacterial peptide chain release factor 2 (bRF-2) [Oceanithermus
           profundus DSM 14977]
          Length = 370

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 169/351 (48%), Positives = 219/351 (62%), Gaps = 7/351 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L+ LGG+FD      RL  L  +     LW +   A+ L +E   L   +   ++
Sbjct: 5   ELKQKLDALGGIFDIAGKKARLEELEKELGQEGLWDDPAAAQKLTQEAARLKKVVEEYEQ 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L   + L + A  E+  S+  E  +  +  KLE  Y Q  +LL  E    +A L +
Sbjct: 65  LSGDLESLIELWDEASPEERESLEPELEEAAK--KLEDLYHQ--TLLGFEHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTRWAE+  FK E +++  G EAGI SA L+++G NAYG L
Sbjct: 121 KPGAGGTEAMDWAEMLLRMYTRWAERHGFKVELVDVTPGPEAGIDSAELIVRGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E+GVHRLVR SP+DS  RRHTSF+S+ V P VDD++EIEI   D RID +RA G GGQ
Sbjct: 181 SAERGVHRLVRPSPFDSTGRRHTSFASVEVSPEVDDTVEIEIKPEDLRIDVFRAQGHGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGE 300
            VNTTDSAVRI H+PTG++V  Q  RSQHKNK  A  +L+++L+E E QKR EE+A +  
Sbjct: 241 GVNTTDSAVRIVHLPTGIIVTSQATRSQHKNKELAMKVLKSRLFEREWQKRQEEMAKLRG 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             K  I WG QIRSYVL   Q VKD RT + +  P  VLDGDLDD + A L
Sbjct: 301 EQKA-IEWGSQIRSYVLD-KQYVKDHRTGLMRHDPDKVLDGDLDDLIWAGL 349


>gi|239941657|ref|ZP_04693594.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           11379]
          Length = 352

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/351 (44%), Positives = 220/351 (62%), Gaps = 5/351 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + ++ R+
Sbjct: 1   MGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  E D     E    L+ +K  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +  + K + 
Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-ALKGDG 297

Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 298 GNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 348


>gi|313675052|ref|YP_004053048.1| bacterial peptide chain release factor 2 (brf-2) [Marivirga
           tractuosa DSM 4126]
 gi|312941750|gb|ADR20940.1| bacterial peptide chain release factor 2 (bRF-2) [Marivirga
           tractuosa DSM 4126]
          Length = 363

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/349 (42%), Positives = 219/349 (62%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D++  V+ +  L   +  P  W +  EA+  M+  Q L        E+
Sbjct: 9   LKARVEALRGYLDYNKKVEEIKELELVSAQPDFWNDSDEAEKTMKVIQGLKEWTKHFDEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   +     E  LE  + S  +E S   ++   + E  + + +LS E D   A L++ 
Sbjct: 69  SELYGEVETYYEF-LEMGESS-EEEVSKAYKKALTKTEELELKKMLSSEEDQLSAMLQIT 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA +L+RMY  W E   +K   ++  +G+ AG+KS TL   GP AYG+LK
Sbjct: 127 PGAGGTESNDWAGILMRMYIMWGEANGYKVREVDFQEGDVAGVKSVTLEFDGPQAYGFLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S++VYPVVDDSIEI+I  +D  + T R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSGGRRHTSFASVYVYPVVDDSIEIDIHPNDVELHTSRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+VV CQ  R+Q  N+ +A  ML+++LY++E++KR    N  E+ 
Sbjct: 247 VNKVETKVQLTHKPTGIVVVCQANRTQLGNREEAMKMLKSQLYQIEVEKRSAERNEVEAG 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I +G QIR+YVL PY+++KD RT +E+T   +VLDGDL+D++KA L
Sbjct: 307 KKKIDFGSQIRNYVLHPYKLIKDARTGVERTDVQNVLDGDLNDYIKAYL 355


>gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301]
 gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC
           6301]
          Length = 304

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/286 (51%), Positives = 201/286 (70%), Gaps = 2/286 (0%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   +LEL   E D ++ +E   N+QR++ E++  + + LLSG  D+  A L ++AGAG
Sbjct: 8   ADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAG 67

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GT++QDWA MLLRMYTRWAE + +K    E+ +GEEAGIKS TL I+G  AYG+LK E+G
Sbjct: 68  GTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGYLKAEKG 127

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+++N +R TSF+ + V PV+D  I++EI E D  I T RA G GGQ+VN  
Sbjct: 128 THRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGGQNVNKV 187

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELELQKREEIANIGESSKTE 305
           ++AVRI H+PTG+ V+C +ERSQ +NK +A  +LRAK L  L+ QK +E+A I      E
Sbjct: 188 ETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILRAKLLVVLQEQKAKEVAEI-RGDMVE 246

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             WG QIR+YV  PYQ+VKDLRT +E  + +DV++GDL+ F++A L
Sbjct: 247 AAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYL 292


>gi|313847717|emb|CBY16707.1| putative peptide chain release factor 2 [Chlamydophila psittaci
           RD1]
          Length = 368

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/351 (48%), Positives = 226/351 (64%), Gaps = 9/351 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   G   D +   Q LS L  +T     WQ+V  A  +      L   IS  +E + R+
Sbjct: 16  LALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIASLKRQISHYEEFKVRV 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFES--LLSGEADSNDAYLEVH 122
            DNL      L + D S   E  ++L++     E    ++E+  LLSGE D N  +L ++
Sbjct: 76  -DNLAFF---LNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+SGAGGQH
Sbjct: 192 AERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E   I   +
Sbjct: 252 VNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 312 KKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362


>gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
 gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
          Length = 360

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 156/341 (45%), Positives = 226/341 (66%), Gaps = 3/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      ++  L  +   P  W +   A+  ++E   L +++   ++ Q +L D   +
Sbjct: 14  IFDLPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAKAI 73

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            EL   E+D S+LQE   NLQ++  E+E  + + LLSG  D+    L ++AGAGGT++QD
Sbjct: 74  SELLELEEDTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDAQD 133

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRW EKR +K   +E  +G+EAGIKSATL I+G  AYG+LKGE+G HRLVR
Sbjct: 134 WAAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVR 193

Query: 193 ISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           ISP+++N +R TSF+ + + P + ++++ +EI E D  I T RA G GGQ+VN  ++AVR
Sbjct: 194 ISPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETAVR 253

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           + H+PTG+ V+C +ERSQ +NK +A  +L+AKL  + +++R +EIA I      E  WG 
Sbjct: 254 VVHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEI-RGDMVEAAWGN 312

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRTN+E +    V+DGDLD F++A L
Sbjct: 313 QIRNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYL 353


>gi|332295608|ref|YP_004437531.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
 gi|332178711|gb|AEE14400.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
          Length = 363

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 156/345 (45%), Positives = 225/345 (65%), Gaps = 11/345 (3%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +CL    D DN +++L  +     +P +WQ+V ++  L +   +L  +I     +     
Sbjct: 18  DCL----DLDNKIKKLEEIRNDLSNPEIWQDVQKSSNLTQLADNLQKSIDEWNNLNSSFE 73

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L   E   E  +  I  E+  NL +I  E+E K   +LLSG+ DS DA L + AGAGG
Sbjct: 74  DFLFWTEFQDEGAENEI-AESYKNLVKILEELEVK---ALLSGKYDSYDAMLSISAGAGG 129

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ++QD+A MLLRMY RW EK K+  E ++   G+EAGI+SAT+  KG  +YG+LK EQGV
Sbjct: 130 VDAQDFAEMLLRMYIRWGEKNKYSVELVDQSPGDEAGIRSATIFFKGKYSYGFLKSEQGV 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+R+SP+D N+RRHTSF  + V P++++  EI +   + +I+T+RASGAGGQHVN TD
Sbjct: 190 HRLIRLSPFDFNNRRHTSFVLVEVTPLIENVKEINVKNEEIKIETFRASGAGGQHVNKTD 249

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEI 306
           SAVRITH+PTG+VV C+ ERSQ +NK  A  +L ++L  L E +++++++      +T+ 
Sbjct: 250 SAVRITHLPTGIVVTCRNERSQFQNKEAAMKILISRLNSLYEEKQKDKMSEF--KGETDA 307

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG+QIR+YV+ PY MVKD RTN+E      VLDG++D+F KA L
Sbjct: 308 SWGKQIRTYVMHPYTMVKDHRTNVEIGDVYGVLDGNIDEFQKAFL 352


>gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 327

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/317 (47%), Positives = 207/317 (65%), Gaps = 2/317 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W + I A+   ++   L +       +Q+   +  + LE+ LEEDD S+  +   +L+ 
Sbjct: 6   FWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEM-LEEDD-SVKDDLEASLET 63

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + FK E 
Sbjct: 64  LGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVET 123

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF S+ V P 
Sbjct: 124 LDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSVEVMPE 183

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ N+ 
Sbjct: 184 LDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRD 243

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD RTN E   
Sbjct: 244 RAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYEVAQ 303

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DGD++ F+ A L
Sbjct: 304 VDKVMDGDIEGFIDAYL 320


>gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG]
          Length = 332

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/326 (46%), Positives = 214/326 (65%), Gaps = 12/326 (3%)

Query: 32  DPHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +P  W      Q VI+A   ++E+   D   +   E++D        LEL  +E D  + 
Sbjct: 3   EPGFWDDSEAAQKVIDANNKLKEKH--DRFYALENELEDLEAG----LELLQDEPDPDLQ 56

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E    L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA
Sbjct: 57  REEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWA 116

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++  FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTS
Sbjct: 117 DQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTS 176

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q 
Sbjct: 177 FASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQA 236

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQ +NKA A  ML+AKLY+ E + ++  A   +  + ++ +G QIRSYV  PY MVKD
Sbjct: 237 QRSQFQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKD 296

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN E  +   V+DGDL+ F+ A L
Sbjct: 297 HRTNYETGNGQAVMDGDLNPFINAYL 322


>gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus
           rhamnosus Lc 705]
 gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705]
          Length = 332

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/326 (46%), Positives = 213/326 (65%), Gaps = 12/326 (3%)

Query: 32  DPHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +P  W      Q VI+A   ++E+   D   +   E++D        LEL  +E D  + 
Sbjct: 3   EPGFWDDSEAAQKVIDANNKLKEKH--DRFYALENELEDLEAG----LELLQDEPDPDLQ 56

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA
Sbjct: 57  HEEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWA 116

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++  FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTS
Sbjct: 117 DQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTS 176

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q 
Sbjct: 177 FASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQA 236

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQ +NKA A  ML+AKLY+ E + ++  A   +  + ++ +G QIRSYV  PY MVKD
Sbjct: 237 QRSQFQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKD 296

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RTN E  +   V+DGDL+ F+ A L
Sbjct: 297 HRTNYETGNGQAVMDGDLNPFINAYL 322


>gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii L2-6]
          Length = 373

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 212/335 (63%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D + +R+  L      P  + +   +K +  E   L   ++  +++Q    D   +L + 
Sbjct: 28  DASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLVML 87

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE D  ++ E  + +  +   V+  Q  ++L+GE D ++A L  HAG GGTE+QDWA M
Sbjct: 88  DEEYDPEMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEM 147

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+
Sbjct: 148 LYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRVSPF 207

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           D+N+RR TSF+S+ V P +D++I+++I   D  +  YR+SGAGGQH+N T SAVR+ H P
Sbjct: 208 DANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKP 267

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+VV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + EI WG QIRSYV
Sbjct: 268 TGIVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYV 327

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             PY MVKD RTN E  +   V+DGDLD F+ A L
Sbjct: 328 FMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYL 362


>gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B]
 gi|166223620|sp|A0LVP4|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus
           cellulolyticus 11B]
          Length = 369

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 213/325 (65%), Gaps = 3/325 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP LW +   A+ +      L   I  ++ ++ RL D ++L ELA  E+D    
Sbjct: 36  LERQAADPGLWNDPENAQRVTSRLSFLQAEIRRVEGLRKRLDDVMVLFELAEAENDEPTR 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    +  ++  ++  +  +LLSGE D+ +A + +++ AGG ++ DWA MLLRMY RWA
Sbjct: 96  TEALAEMAALQKAIDDLEVRTLLSGEYDAREALVTINSQAGGVDAADWAQMLLRMYLRWA 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  + TE L+    EEAGIKSAT ++  P  YG L  E G HRLVRISP+D+ +RR TS
Sbjct: 156 ERHGYPTEILDTSYAEEAGIKSATFIVHAPFTYGLLAAEHGTHRLVRISPFDNQARRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+ + V PVV+ +  I+I E + R+D +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ 
Sbjct: 216 FAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQN 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ +N+A A  +L+A+L  LE +++EE A +     +T   WG QIR+YVL PYQ+VK
Sbjct: 276 ERSQLQNRATAMMVLQARL--LERRRQEEAAKLAALRGETTTSWGTQIRNYVLHPYQLVK 333

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKA 349
           DLRT +E ++ + VLDG++D+F+ A
Sbjct: 334 DLRTEVETSNTAGVLDGEIDEFIDA 358


>gi|299472049|emb|CBN80132.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 466

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 216/336 (64%), Gaps = 6/336 (1%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ L+    DP L+ +  +A  +++ER  +++ +  +K +   L     + E+A  E++
Sbjct: 119 RLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSELQSWREMYEMASLEEE 178

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLR 139
             +L E  + +  ++ + E  + E+LLS  GE  +++ YLE+ AGAGGTES DW +ML +
Sbjct: 179 GDLLTECIEKVGALRKQAERARAETLLSLGGELSASNCYLELQAGAGGTESHDWTSMLYK 238

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTRWAE + F  + L    G+EAG++S  + ++G +AYGWL+ E GVHRLVR SPYD N
Sbjct: 239 MYTRWAETKAFTLQPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAGVHRLVRNSPYDPN 298

Query: 200 SRRHTSFSSIWVYPVVD----DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            RRHTSFS + V+P       D+ ++EI   D ++DT RA GAGGQHVNTTDSAVR+TH+
Sbjct: 299 GRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHL 358

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+V   Q +RSQHKN+  A   LRAK+++ + ++R    N   +   +  +G QIRSY
Sbjct: 359 PTGLVALSQSDRSQHKNRENAMRALRAKIFQRKEEERHAKRNEYAAGLGDNAFGNQIRSY 418

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VL PYQMVKD RT  ++   S VLDG LD F+ A L
Sbjct: 419 VLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAAL 454


>gi|227535953|ref|ZP_03966002.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771659|ref|ZP_07081534.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|227244196|gb|EEI94211.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300761648|gb|EFK58469.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 283

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 138/266 (51%), Positives = 196/266 (73%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE     Q    ++E  +F+++LS E D  DA L++ AGAGGTES DWA ML+RMY  W 
Sbjct: 13  QELESQYQTALQDIEELEFKNMLSAEEDQLDAILQITAGAGGTESCDWAAMLMRMYIMWG 72

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK   K    +  +G+ AGIK+ TL   G  AYG+LKGE GVHRLVRISP+DSN++RHTS
Sbjct: 73  EKHGCKVTEQDSQEGDVAGIKTVTLQFSGNFAYGYLKGENGVHRLVRISPFDSNAKRHTS 132

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++VYP++DD+IEI++ +S+   DT+R+ GAGGQ+VN  ++AVR+ H PTG++++ Q+
Sbjct: 133 FASVYVYPLIDDNIEIDVKDSEIEWDTFRSGGAGGQNVNKVETAVRLHHKPTGIIIKNQE 192

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQ +NK  A  +L+++LYE+E++KR+E   + E SK +I WG QIR+YVL PY++VKD
Sbjct: 193 TRSQLQNKENALRLLKSQLYEIEMRKRQEATAVIEGSKKKIEWGSQIRNYVLHPYKLVKD 252

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT++E ++   VLDGD+D F+KA L
Sbjct: 253 LRTSVETSNTQAVLDGDIDMFLKAYL 278


>gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4]
 gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4]
          Length = 376

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 157/353 (44%), Positives = 223/353 (63%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  +  + D +    +++ L  +   P LW NV EA+ +  +  H    +  + E+
Sbjct: 21  LTGKLTQIESVMDLEALRAQVAELEEQASSPTLWDNVEEAQKVTSQLSHRQAELRRVSEL 80

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D   + E   +L  +  +++  +  +LLSGE D  +A + + 
Sbjct: 81  RQRLDDLGVLYELAADEGDSGSMTEAEGDLADLAKDIDALEVRTLLSGEYDDRNAVVNIR 140

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  +I   EEAGIKSAT  +  P  YG L 
Sbjct: 141 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVFDISYAEEAGIKSATFKVTAPYVYGTLS 200

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V P V++   ++I E D R+D YR+SG GGQ 
Sbjct: 201 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDIPEKDIRVDVYRSSGPGGQS 260

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L  L+ +K EE A +    
Sbjct: 261 VNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAAAMKVLQARL--LQRKKEEERAEMDALK 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +K
Sbjct: 319 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPTAVLDGDIDGFLEAGIRWRK 371


>gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992816|gb|EEC58817.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
          Length = 333

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 152/321 (47%), Positives = 222/321 (69%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W +  +++  M+E + L ++     E++  + D   L+ +A EE+D S++ E  +
Sbjct: 2   EAPGFWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMADEENDESLVPEVEE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
                + + +  +  +LLSGE D ++A L +HAGAGGTE+ DW  ML+RMYTRWAE + +
Sbjct: 62  EFNVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAESKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE ++  +G+EAG+K+ T+ I+G NAYG+L+ E G+HRLVRISP+++  +R TSF S  
Sbjct: 122 KTEVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH
Sbjct: 182 VMPDIEEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKLY L+ Q+  E  +       ++ +G QIRSYVLQPY MVKD RTN 
Sbjct: 242 QNKDKAMQMLKAKLYLLKKQENAEKTSDIRGDVKDVNFGSQIRSYVLQPYTMVKDHRTNE 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDG++D F+ A L
Sbjct: 302 EVGNAQSVLDGNIDPFITAYL 322


>gi|294785988|ref|ZP_06751275.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
 gi|294486325|gb|EFG33688.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
          Length = 308

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 210/298 (70%), Gaps = 1/298 (0%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           N +S  +++   + D  +L++  +E  + S   E     + +K ++E  +   LL GE D
Sbjct: 6   NIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQTKHKILKSDIEEFEINLLLDGEYD 64

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L++
Sbjct: 65  MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLVE 124

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDTY
Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPTDIRIDTY 184

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+E
Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKKE 244

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L
Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302


>gi|315221796|ref|ZP_07863708.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
 gi|315189029|gb|EFU22732.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
          Length = 325

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 148/320 (46%), Positives = 203/320 (63%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L       +++ D   ++ ILL+   E+D      E    
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKQTYDNFQQMADLFDESEILLDFLAEDDSVQEELEEKLA 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
               K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     FK
Sbjct: 63  ELETKM-TSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q+ 
Sbjct: 181 MPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  +L+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT  E
Sbjct: 241 NRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTGFE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD+D F+ A L
Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320


>gi|305667119|ref|YP_003863406.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
 gi|88708053|gb|EAR00291.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
          Length = 313

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 135/255 (52%), Positives = 192/255 (75%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F+++LS E D   A L++ AGAGGTES DWA ML+RMY  W++K  FK + L   
Sbjct: 52  IEKLEFKNMLSEEGDELTAVLQITAGAGGTESCDWAAMLMRMYMMWSQKNGFKVKELNYQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+ AGIK+ TL ++G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDS
Sbjct: 112 EGDVAGIKTVTLEVEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDS 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEI+++ +D  I T R+SGAGGQ+VN  ++ V++ H P+G+ +QC   RSQH N+A A  
Sbjct: 172 IEIDVNPADIEITTARSSGAGGQNVNKVETKVQLVHKPSGIQIQCSDSRSQHDNRATAMK 231

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           ML+++LYE+EL+K+ E     ESSK +I WG QIR+YV+ PY++VKD+RT+ E  +   V
Sbjct: 232 MLKSQLYEIELRKKMEAREEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTSEETGNVDAV 291

Query: 339 LDGDLDDFMKATLAI 353
           +DG++D F+KA L +
Sbjct: 292 MDGNIDQFLKAFLMM 306


>gi|34762942|ref|ZP_00143922.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887403|gb|EAA24493.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 308

 Score =  296 bits (758), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 150/298 (50%), Positives = 210/298 (70%), Gaps = 1/298 (0%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           N +S  +++   + D  +L++  +E  + S   E     + +K ++E  +   LL GE D
Sbjct: 6   NIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQTKHKILKSDIEEFEINLLLDGEYD 64

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  GIKS T L++
Sbjct: 65  INNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGIKSVTFLVE 124

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDTY
Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDTY 184

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+E
Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKKE 244

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L
Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302


>gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159]
 gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans
           UA159]
          Length = 325

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 210/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +Q+ L D   LL+  LEEDD S+  E  ++
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKLKYETFNSMQE-LSDETELLQEMLEEDD-SLQGELEED 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            + L+   G+EAGIKS  L  +G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VDVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIP+G+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +    V+DG+LD F+ A L
Sbjct: 301 VSQVDRVMDGELDGFIDAFL 320


>gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
 gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
          Length = 325

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 206/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++ D   ++ ILLE  L ED+    +     
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEF-LSEDESVHEELEEKL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           ++  K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     FK
Sbjct: 62  IELDKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD+D F+ A L
Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320


>gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942]
 gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus
           elongatus PCC 7942]
          Length = 304

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 145/286 (50%), Positives = 201/286 (70%), Gaps = 2/286 (0%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   +LEL   E D ++ +E   N+QR++ E++  + + LLSG  D+  A L ++AGAG
Sbjct: 8   ADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAG 67

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GT++QDWA MLLRMYTRWAE + +K    E+ +GEEAGIKS TL I+G  AYG+LK E+G
Sbjct: 68  GTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGYLKAEKG 127

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+++N +R TSF+ + V PV+D  I++EI E D  I T RA G GGQ+VN  
Sbjct: 128 THRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGGQNVNKV 187

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELELQKREEIANIGESSKTE 305
           ++AVRI H+PTG+ V+C +ERSQ +NK +A  +L+AK L  L+ QK +E+A I      E
Sbjct: 188 ETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILKAKLLVVLQEQKAKEVAEI-RGDMVE 246

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             WG QIR+YV  PYQ+VKDLRT +E  + +DV++GDL+ F++A L
Sbjct: 247 AAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYL 292


>gi|312879986|ref|ZP_07739786.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
 gi|310783277|gb|EFQ23675.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
          Length = 374

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 157/342 (45%), Positives = 213/342 (62%), Gaps = 1/342 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D   A  R+  L  +  DP  W    +A+   RE   L       + +   L +   L 
Sbjct: 24  LDLPAAETRIEGLLKQAADPEFWTRE-DAQETTRELAQLQQKRESWETLNRELQEMETLA 82

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            L  E +D  + +E        + E+E +Q   LL  E D +DA + +HAGAGG +SQDW
Sbjct: 83  ALLAEGEDVDLEEEFYRRAGAFEKELERRQIFVLLDEEYDRSDAIVTIHAGAGGLDSQDW 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             +L RMY RW EK  FK+  L+    +EAGIKS T  + G  AYG+LKGE+GVHRLVRI
Sbjct: 143 TEILSRMYLRWVEKEGFKSRILDQLADQEAGIKSITFEVLGDYAYGYLKGEKGVHRLVRI 202

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RRHTSF+S+ V PV+ +  +IEI   D ++DT+R+SGAGGQ+VN TDSAVRIT
Sbjct: 203 SPFDAAKRRHTSFASVEVLPVLPEDADIEIRPEDLKMDTFRSSGAGGQYVNMTDSAVRIT 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG++V CQ ERSQH N+A A  +L++KL+E +LQ+R+E     +  K  I WG QIR
Sbjct: 263 HIPTGIIVSCQVERSQHMNRATALQVLKSKLFERQLQERQEHLESLQGEKRSIAWGSQIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SY LQP+Q+VKD R+  E  + + VLDGDL++ + +TL   K
Sbjct: 323 SYTLQPFQLVKDHRSGCEVGNVAAVLDGDLEELIMSTLRFFK 364


>gi|240168635|ref|ZP_04747294.1| peptide chain release factor 2 [Mycobacterium kansasii ATCC 12478]
          Length = 376

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 163/354 (46%), Positives = 225/354 (63%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    ++  L  +  DP LW +   A+ +  E  H    +  ++++
Sbjct: 16  LDSTLTTVERVLDVDALRAKIDKLEHEASDPKLWDDQARAQRVTSELSHAQGELRRVEQL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +  ++    +K    E+E  +  +LLSGE D  +A +
Sbjct: 76  RSRLDDLPVLYELAAEEEGEAAAEALAEADAELKALHAEIEATEVRTLLSGEYDEREALV 135

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 136 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 195

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 196 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + 
Sbjct: 256 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRLEERAEL- 312

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 313 DALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 366


>gi|224533030|ref|ZP_03673636.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
 gi|224512024|gb|EEF82419.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
          Length = 269

 Score =  296 bits (757), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 142/264 (53%), Positives = 192/264 (72%), Gaps = 10/264 (3%)

Query: 97  LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           +E+E+    KQ++ LL+      E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE+
Sbjct: 1   MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  E ++ + V+DG++D+F++  L
Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYL 263


>gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
 gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
          Length = 248

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 141/245 (57%), Positives = 186/245 (75%), Gaps = 1/245 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +  AD   A+L++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    +   G+ AGIK
Sbjct: 1   MFNNPADPLPAFLDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEDETPGDTAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I+G  A+G L+ E GVHRLVR SP+DS+  RHTSF+SI+VYP +DD+IEIEI+ +
Sbjct: 61  SATIKIEGDYAFGLLRTETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDTIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYD 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR E     E +KT++GWG QIRSYVL   + +KDLRTN E ++   VLDGDLD F
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLDQSR-IKDLRTNYETSATQKVLDGDLDPF 239

Query: 347 MKATL 351
           ++A+L
Sbjct: 240 IEASL 244


>gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
 gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
          Length = 373

 Score =  295 bits (756), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 212/335 (63%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D + +R+  L      P  + +   +K +  E   L   ++  +++Q    D   +L + 
Sbjct: 28  DASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLVML 87

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE D  ++ E  + +  +   V+  Q  ++L+GE D ++A L  HAG GGTE+QDWA M
Sbjct: 88  DEEYDPDMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEM 147

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+
Sbjct: 148 LYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRVSPF 207

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           D+N+RR TSF+S+ V P +D++I+++I   D  +  +R+SGAGGQH+N T SAVR+ H P
Sbjct: 208 DANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVFRSSGAGGQHINKTSSAVRLIHKP 267

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TGVVV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + EI WG QIRSYV
Sbjct: 268 TGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYV 327

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             PY MVKD RTN E  +   V+DGDLD F+ A L
Sbjct: 328 FMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYL 362


>gi|312278454|gb|ADQ63111.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
           thermophilus ND03]
          Length = 326

 Score =  295 bits (756), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 204/320 (63%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L         +++   +  + LE+ LEEDD    +     
Sbjct: 3   EPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEM-LEEDDSVQEELEETL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +  K+   Y +   LLS   D N+A LE+H G+GGTE+QDWA MLLRMY R+   + FK
Sbjct: 62  EKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY MVKD RT   
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYG 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD++ F+ A L
Sbjct: 301 VAQVDKVIDGDIEGFIDAYL 320


>gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
 gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
          Length = 332

 Score =  295 bits (756), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 156/320 (48%), Positives = 207/320 (64%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W +  +A+ L+ E   L        E++    D    LEL  EE D  + +E  +N
Sbjct: 3   EPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKEEPDKELQEEVENN 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  ++      + + L+SG+ DS++A +E+H GAGGTE+ DWA+MLLRMY R+ E   FK
Sbjct: 63  LTHLQSAFHNYELDLLMSGKYDSHNALVEIHPGAGGTEAMDWASMLLRMYQRYCESVGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS ++ + G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEINDYEPGEEAGVKSVSIRVSGKNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRTN E
Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTNYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DG L  F+ A L
Sbjct: 303 TADVKGVMDGKLQPFIYAYL 322


>gi|166031017|ref|ZP_02233846.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
 gi|166029284|gb|EDR48041.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
          Length = 318

 Score =  295 bits (756), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 154/306 (50%), Positives = 210/306 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L   +  I  +     D   L+E+  EE+D S+++E   ++   + + E  + E
Sbjct: 1   MKELKDLQEHLKVIHALYSEYDDICTLIEMVDEEEDRSMVKEIEKDIAHFEEDFEKLRIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DS +A + +HAG GGTE+ DW NML RMYTRW + + F  + L+  DG+  GI
Sbjct: 61  TLLSGEYDSCNAIMTLHAGTGGTEACDWVNMLYRMYTRWFQTKGFSVQVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP++S  +R TSF+S  V P +++ I+I+I E
Sbjct: 121 KNITFEVVGDNAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVVPDIEEDIDIDILE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+AKL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLK 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       +IG+G QIRSYV+QPY +VKD RTN+E  + + VLDGDLD 
Sbjct: 241 LLQEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNVENGNVTAVLDGDLDM 300

Query: 346 FMKATL 351
           F+ A L
Sbjct: 301 FINAYL 306


>gi|228472944|ref|ZP_04057701.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275526|gb|EEK14303.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 366

 Score =  295 bits (756), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 225/325 (69%), Gaps = 2/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT  P  W +  +A++L+++ Q     ++  ++  + + +  I+L+   E  +    +E 
Sbjct: 36  KTLAPDFWDSPKQAQLLVQKLQSQKKWVTDYEKSAEMVEELQIMLDFYKE--NAISAEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            D   +  L +E  +F ++LS E D+  A L++ AGAGGTES DWA+ML+RMY  WA ++
Sbjct: 94  EDFYGQTLLHIENLEFRNMLSDEGDALSAVLQITAGAGGTESCDWASMLMRMYMMWANRQ 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F  + L   +G+ AG+K+ TL I G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S
Sbjct: 154 GFSVKELNFQEGDVAGVKTVTLEIDGEFAFGYLKGENGVHRLVRISPFDSNAKRHTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+ DD+IEIEI+ +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RS
Sbjct: 214 VYVYPLADDTIEIEINPADISFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRS 273

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q  NK +A  +L+++LYE+EL+KR+   +  E++K +I WG QIR+YV+ PY++VKD+R+
Sbjct: 274 QLDNKNKALQLLKSQLYEIELKKRQAKRDEIEANKMKIEWGSQIRNYVMHPYKLVKDVRS 333

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
             E T+   V++G+LDDF+KA L +
Sbjct: 334 GYETTNVDAVMNGELDDFLKAYLML 358


>gi|223982761|ref|ZP_03632989.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
 gi|223965261|gb|EEF69545.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
          Length = 327

 Score =  295 bits (756), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 159/305 (52%), Positives = 205/305 (67%), Gaps = 18/305 (5%)

Query: 65  RLCDNLILLELALEEDDCSI--LQETSDNL-----QRIK--LEVEYK----QFES----- 106
           R C+ +  LE    + + S+  LQET D L     + +K  L++EY+    QFE      
Sbjct: 18  RQCNGMKELEAKYHQMEQSLASLQETVDELNQNFDEELKELLDMEYQDTLNQFEDFEVMV 77

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLS   D N+A LE+H GAGGTESQDWA+ML RMY RWAE++ +K   L+  +GEEAGIK
Sbjct: 78  LLSHPYDKNNAILELHPGAGGTESQDWASMLYRMYCRWAERKGYKVTLLDYQEGEEAGIK 137

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S ++LI+G  AYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P   D IEI I E 
Sbjct: 138 SVSILIEGDMAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASLDVMPQFSDEIEITIDER 197

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  + T RASGAGGQH+N TDSAVR+TH PTG+VV CQ ERSQ +N+ +  NML++KLY+
Sbjct: 198 DLDVVTMRASGAGGQHINKTDSAVRMTHKPTGIVVSCQTERSQIQNRERCMNMLKSKLYQ 257

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++++E         +  I WG QIRSYV  PY MVKD RT  E  S  +V+DGDLD F
Sbjct: 258 RMIEEQEAKLAAIRGEQKNIEWGSQIRSYVFCPYTMVKDHRTGYEMGSVQNVMDGDLDGF 317

Query: 347 MKATL 351
           + + L
Sbjct: 318 IFSYL 322


>gi|189485333|ref|YP_001956274.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287292|dbj|BAG13813.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 329

 Score =  295 bits (755), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 162/323 (50%), Positives = 218/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +AK  M E   L N      ++   + D + L  LA +E+D  +L++  D 
Sbjct: 2   EPDFWNDQNKAKKTMAELDDLKNVCRLWYDMSREVKDLIDLSMLATDENDEKLLKDVEDG 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            ++++ E+   +  + L GE D N+A + +HAGAGGTES DWA +LLRMY+RWAE + FK
Sbjct: 62  SKKLEKELSVFEVRTKLGGEHDKNNAIISIHAGAGGTESCDWAQILLRMYSRWAEDKGFK 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE ++  DG+EAGIK+ T++I+G  AYG+L+ E GVHRLVRISP+DSN RRHTSFSS+ V
Sbjct: 122 TEVVDSLDGDEAGIKNITMIIRGEYAYGFLQSEIGVHRLVRISPFDSNKRRHTSFSSVDV 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P V+DSI+I I + D RIDTYRASGAGGQH+N TDSAVRITH+ T + VQ Q +RSQ K
Sbjct: 182 IPEVEDSIDIIIEDKDIRIDTYRASGAGGQHINKTDSAVRITHLATEITVQSQNDRSQIK 241

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  +L+A+LYELE +K+        + K  I W  QIRSYV  PYQ+VKD RT  +
Sbjct: 242 NRTTAMKLLKARLYELEQEKQRASYEKHYNEKGAIEWSSQIRSYVFMPYQLVKDHRTGYK 301

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
                 V+DGD+DDF+ A L+ K
Sbjct: 302 TLRMDLVMDGDIDDFISAYLSWK 324


>gi|323351855|ref|ZP_08087506.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|322121912|gb|EFX93644.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|324993198|gb|EGC25118.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405]
 gi|324995500|gb|EGC27412.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678]
 gi|325687821|gb|EGD29841.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72]
 gi|325689974|gb|EGD31978.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115]
 gi|325696780|gb|EGD38668.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160]
 gi|327461467|gb|EGF07798.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1]
 gi|327469623|gb|EGF15092.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330]
 gi|327473772|gb|EGF19190.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408]
 gi|327489322|gb|EGF21115.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058]
 gi|332359597|gb|EGJ37415.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49]
 gi|332361549|gb|EGJ39353.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056]
 gi|332362808|gb|EGJ40602.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355]
 gi|332366326|gb|EGJ44078.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059]
          Length = 325

 Score =  295 bits (755), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++ +   ++ ILL+  L ED+    +     
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +  K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 62  AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|324990937|gb|EGC22872.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353]
          Length = 325

 Score =  295 bits (755), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++ +   ++ ILL+  L ED+    +     
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +  K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 62  AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|256846801|ref|ZP_05552256.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
 gi|256717767|gb|EEU31325.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
          Length = 331

 Score =  295 bits (755), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 150/322 (46%), Positives = 219/322 (68%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           T + + W +  ++  +++      N +S  +++   + D  +L++  +E  + S   E  
Sbjct: 5   TFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQ 63

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  +   LL  E D N+A + +H+GAGGTE+ DWA+ML RMY RW   + 
Sbjct: 64  TKHKILKSDIEEFEINLLLDREYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKG 123

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+
Sbjct: 124 YKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASV 183

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ
Sbjct: 184 EVVPEVDENVEVEINPTDIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQ 243

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD RTN
Sbjct: 244 LSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTN 303

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  +   V+DG +DDF+ + L
Sbjct: 304 TEIGNVKAVMDGSIDDFINSYL 325


>gi|125717712|ref|YP_001034845.1| peptide chain release factor 2 [Streptococcus sanguinis SK36]
 gi|125497629|gb|ABN44295.1| Peptide chain release factor 2, putative [Streptococcus sanguinis
           SK36]
          Length = 325

 Score =  295 bits (755), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++ +   ++ ILL+  L ED+    +     
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDELVQGELEEKL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +  K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 62  AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|54026461|ref|YP_120703.1| peptide chain release factor 2 [Nocardia farcinica IFM 10152]
 gi|76363350|sp|Q5YR52|RF2_NOCFA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54017969|dbj|BAD59339.1| putative peptide chain release factor 2 [Nocardia farcinica IFM
           10152]
          Length = 372

 Score =  295 bits (754), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 160/355 (45%), Positives = 226/355 (63%), Gaps = 8/355 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H    +  +++
Sbjct: 11  ELDATLKTVESVLDIEELRRRIDELEHQAADPDLWNDQDHAQRVTSELSHAQGELRRVED 70

Query: 62  IQDRLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ RL D  +L ELA  E+     + L+E       +  +VE  +  +LLSGE D  +A 
Sbjct: 71  LRRRLEDLPVLYELAEGEEGEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREAL 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ DWA ML+RMY RWA++  +  E  +    EEAGIKSAT  +K P AY
Sbjct: 131 VNIRSGAGGVDAADWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ E++ R+D YR+SG 
Sbjct: 191 GTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETEIRVDVYRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE +++EE A +
Sbjct: 251 GGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRQEERAEM 308

Query: 299 GESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            ++ KT  G  WG Q+RSYVL PYQMVKDLRTN E  +PS VL+GD+D F+++ +
Sbjct: 309 -DALKTNEGASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLNGDIDGFIESGI 362


>gi|328945974|gb|EGG40121.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087]
          Length = 325

 Score =  295 bits (754), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 151/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++ +   ++ ILL+   E  D S+  E  + 
Sbjct: 3   EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFMAE--DESVQGELEEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 61  LAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|326798108|ref|YP_004315927.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
 gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
          Length = 361

 Score =  295 bits (754), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 147/319 (46%), Positives = 211/319 (66%), Gaps = 2/319 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  EA+ +++  +          E+   + D  ++ +     D     QE  +  
Sbjct: 39  PDFWDHPKEAEKVLQSIKSKKVWTDSFDELLQAIDDASVMFDFYQSGDASE--QEADELF 96

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           Q     VE  +F+++LS E D   A L++ AGAGGTES DWA ML+RMY  W EK  +K 
Sbjct: 97  QEALKRVEELEFKNMLSAEEDQLTAILQITAGAGGTESCDWAAMLMRMYIMWGEKNGYKV 156

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              +  +G+ AG+KS TL   G  AYG+LKGE GVHRLVRISP+DSN++RHTSF+S++VY
Sbjct: 157 TEQDFLEGDVAGVKSVTLQFDGNFAYGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVY 216

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P+VDD+IEIE+ +SD   DT+R+ GAGGQ+VN  ++AVR+ H P+G+V++ Q+ RSQ +N
Sbjct: 217 PLVDDTIEIEVKDSDIEWDTFRSGGAGGQNVNKVETAVRLHHKPSGIVIKNQESRSQLQN 276

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           K  A  +L+++LYE+E++KR E     E SK +I WG QIR+YVL PY++VKDLRT  E 
Sbjct: 277 KDNAMRLLKSQLYEIEMRKRMETTAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRTGHET 336

Query: 333 TSPSDVLDGDLDDFMKATL 351
           ++   VLDG+LD+F+K+ L
Sbjct: 337 SNTQAVLDGELDEFLKSYL 355


>gi|315223860|ref|ZP_07865708.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
 gi|314946190|gb|EFS98191.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
          Length = 315

 Score =  295 bits (754), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 133/255 (52%), Positives = 195/255 (76%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   
Sbjct: 52  IEALEFRNMLSDEGDTMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+ AGIK+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+
Sbjct: 112 EGDVAGIKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDT 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEI+I+ +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  
Sbjct: 172 IEIDINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 231

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +L+++LYE+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RTN E T    V
Sbjct: 232 LLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSV 291

Query: 339 LDGDLDDFMKATLAI 353
           ++G+LD+F+KA L +
Sbjct: 292 MNGELDEFLKAYLML 306


>gi|33241929|ref|NP_876870.1| peptide chain release factor 2 [Chlamydophila pneumoniae TW-183]
 gi|33236439|gb|AAP98527.1| translation releasing factor RF-2 [Chlamydophila pneumoniae TW-183]
          Length = 253

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 142/247 (57%), Positives = 182/247 (73%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LSGEAD N  +L ++AGAGGTES DW  ML RMY+RWA K ++  E ++  DGE  GIK
Sbjct: 1   MLSGEADKNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             T+   G  AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI  +
Sbjct: 61  HVTVKFSGMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPN 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT+R+SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+     ML+AKLY+
Sbjct: 121 DLRIDTFRSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQ 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345
             LQ+R E  ++    K EI WG QIR+YV QPY +VKD+RT  E  +   +LDG+ LD+
Sbjct: 181 QVLQERLEKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDE 240

Query: 346 FMKATLA 352
           F+KA LA
Sbjct: 241 FIKAYLA 247


>gi|213962528|ref|ZP_03390790.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
 gi|213954854|gb|EEB66174.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
          Length = 317

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 133/255 (52%), Positives = 194/255 (76%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   
Sbjct: 53  IEALEFRNMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQ 112

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+ AGIK+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+
Sbjct: 113 EGDVAGIKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 172

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEIEI+ +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  
Sbjct: 173 IEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 232

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +L+++LYE+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RTN E T    V
Sbjct: 233 LLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSV 292

Query: 339 LDGDLDDFMKATLAI 353
           ++G+LD+F+KA L +
Sbjct: 293 MNGELDEFLKAYLML 307


>gi|150024963|ref|YP_001295789.1| peptide chain release factor 2 [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771504|emb|CAL42973.1| Peptide chain release factor 2 (RF-2) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 293

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 136/266 (51%), Positives = 196/266 (73%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE     +     +E  + +++LS E D+  A L++ AGAGGTES DWA ML+RMY  WA
Sbjct: 20  QELDQQYEATNTHIEGIELKNMLSDEGDALSAVLQITAGAGGTESCDWAEMLMRMYIMWA 79

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           + + +K + L    G+ AGIK+ TL I+G  ++G+LKGE GVHRLVRISP+DSN++RHTS
Sbjct: 80  QNQGYKIKELNFQKGDAAGIKTVTLEIEGDYSFGYLKGENGVHRLVRISPFDSNAKRHTS 139

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++VYP+VDD+IEIEI+ +D  I T R+SGAGGQ+VN  ++ V++TH PTG+ +QC +
Sbjct: 140 FASVYVYPLVDDTIEIEINPADIEIITARSSGAGGQNVNKVETKVQLTHKPTGIQIQCSE 199

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQH N+ +A  MLR++LYE+EL+K++E  N  E+ K +I WG QIR+YV+QPY++VKD
Sbjct: 200 TRSQHDNRNRAMQMLRSQLYEIELKKQQEQRNDIEAGKMKIEWGSQIRNYVMQPYKLVKD 259

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           +RT  E +    V++G++D F+KA L
Sbjct: 260 VRTGHETSDVDSVMNGNIDAFLKAYL 285


>gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
 gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
          Length = 369

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 147/350 (42%), Positives = 222/350 (63%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    +++ L+ +   P LW +  +A+ +        N +  I+ 
Sbjct: 11  QLRATLATISAVSDPEALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q R+ D  +L+E+A+E +D   L E  D    IK +++  +  +LLSGE D+ +A + +
Sbjct: 71  MQQRIDDLEVLVEMAVEGNDADTLHEAEDEYAAIKKDLDQLEVRTLLSGEYDAREAVVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 131 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI +++ R+D +R+SG GGQ
Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHVEIPDNEIRVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  LE Q  E+      +
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAEEKAKKKELA 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG Q+RSYVLQPYQMVKDLRT  E  + + V DG +DDF++A +
Sbjct: 310 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGI 359


>gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
 gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
 gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
 gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium sp. P08]
          Length = 371

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 153/349 (43%), Positives = 217/349 (62%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +   LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFATADDDKESLTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  +K E L+    EEAGIKSAT ++  P +YG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGI 362


>gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
 gi|226726318|sp|A6WEK6|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
          Length = 367

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 151/342 (44%), Positives = 219/342 (64%), Gaps = 3/342 (0%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D   + L+ LN +   P LW +   A+ +      +   +  I+++  R+ D  +L+E
Sbjct: 24  DLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKMGGRIDDLEVLVE 83

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L+ +E D   L E    L  +K ++   +  +LLSGE DS +A + + + AGG ++ D+A
Sbjct: 84  LSEDEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIRSEAGGVDAADFA 143

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMY RWAE+R +K+E  +    EEAGIKSAT  +  P AYG L  EQG HRLVRIS
Sbjct: 144 EMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLSVEQGTHRLVRIS 203

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+  RR TSF+ + V PVV ++  +++ E++ R+D YR+SG GGQ VNTTDSAVR+TH
Sbjct: 204 PFDNQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQSVNTTDSAVRLTH 263

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV CQ E+SQ +NKA A  +L+AKL  LE  +++  A +      + G WG Q+R
Sbjct: 264 LPTGIVVTCQNEKSQLQNKAAAMRVLQAKL--LEKARKDRQAELDALKGDDSGSWGNQMR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SYVL PYQMVKDLRTN E  + S + DG++D F++A +  +K
Sbjct: 322 SYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWRK 363


>gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
          Length = 309

 Score =  294 bits (752), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 144/286 (50%), Positives = 199/286 (69%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   L+ELA E +D +  QE    L  ++ ++   +   +LSGE D ++ +++++AGA
Sbjct: 11  LDDAQTLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGA 70

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGT+S DWA ML+RMYTR+ E+R ++ E  ++  GEEAG K+ +L I+G  AYG+LK E 
Sbjct: 71  GGTDSMDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEV 130

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D  +   R  GAGGQ VN 
Sbjct: 131 GVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNK 190

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T S  ++ H+PT +++ CQ ERSQ  NK  A+ +LRA+LYELEL+KRE   +  E+ K +
Sbjct: 191 TSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKD 250

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           I +G QIRSYVL PY+MVKDLRT +E  +   VLDGDL+ F+ A L
Sbjct: 251 ISFGSQIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 296


>gi|319939454|ref|ZP_08013814.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
 gi|319811440|gb|EFW07735.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
          Length = 325

 Score =  294 bits (752), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 147/320 (45%), Positives = 203/320 (63%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + + A+   +E   L       +++ D   ++ ILL+   E+D      E    
Sbjct: 3   EPDFWDDNVAAQKTSQELNELKQTYDNFQQMTDLFDESEILLDFLAEDDSFQEELEEKLA 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
               ++   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     FK
Sbjct: 63  ELETRM-TSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q+ 
Sbjct: 181 MPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  +L+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT  E
Sbjct: 241 NRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTGYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|255037742|ref|YP_003088363.1| peptide chain release factor 2 [Dyadobacter fermentans DSM 18053]
 gi|254950498|gb|ACT95198.1| bacterial peptide chain release factor 2 (bRF- 2) [Dyadobacter
           fermentans DSM 18053]
          Length = 357

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  LG   D+ N  Q+L  L  +T  P  W +   A+ +M+E + L    +  +E+
Sbjct: 9   LKARVEALGRYLDYANRKQQLGQLEQQTVQPEFWTDSARAEKVMKEIRGLKFWTNGYEEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             RL D+L  +     E D +  +E  +  +++  +++  +F  ++  E D   A +E++
Sbjct: 69  A-RLRDDLDTI-WEFYEADEATEEEVDEEGKKLADKLDEIEFRKMMGEEGDELPAVIEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML+RMY  WAEK  +K   +++ DG+ AG+KS TL I G  AYG LK
Sbjct: 127 AGAGGTESQDWASMLMRMYIMWAEKNGYKVRQVDLQDGDVAGVKSVTLEIDGEYAYGNLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++VYP+ DD+IEIE++ +D   DTYR+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFTSVYVYPLADDNIEIEVNMADITWDTYRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G+++ CQQERSQ  NK  A  +L+++LY++EL+KR       E+S
Sbjct: 247 VNKVETAVRLHHKPSGIIIACQQERSQLMNKEVAIRLLKSRLYQIELEKRNSARAEVEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYVL   + VKD RT+ + ++   VL+GD++ F+KA L
Sbjct: 307 KRKIEWGSQIRSYVLDD-RRVKDHRTDYQTSNTEAVLNGDINAFIKAYL 354


>gi|254304309|ref|ZP_04971667.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324501|gb|EDK89751.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 308

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 151/298 (50%), Positives = 212/298 (71%), Gaps = 1/298 (0%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           N +S  +++   + D  +L++  +E  + S   E S+  + +K ++E  +   LL GE D
Sbjct: 6   NIVSRYEKLATEIDDEEVLIDF-VESGETSFENELSEKHKILKSDIEEFEINLLLDGEYD 64

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L++
Sbjct: 65  MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKAYKVSELDFMEGDSVGVKSVTFLVE 124

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDTY
Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDTY 184

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELEL+K+E
Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKKE 244

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L
Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302


>gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
 gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
          Length = 370

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 215/351 (61%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D    R+  L  +  DP LW +   A+ +          +  I  
Sbjct: 11  ELDATLTTIEKVVDVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE D   ++        ++  +E  +  ++LSG  D  +A + +
Sbjct: 71  LRGRLDDLSVMYELAEEESDSDAVEMADAERAELRAAIESLEVTTMLSGPYDEREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWA+K   K E  +    EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  I+I ESD RID YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEETDHIDIPESDLRIDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300
            VNTTDSAVR+TH+PTG+VV CQ E+SQH+NKA A  +L+AKL E + Q +R E+  +G 
Sbjct: 251 SVNTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKRQEERAELDALGA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+RSYVL PYQMVKDLRT  E  +P  VLDGDLD F++A +
Sbjct: 311 GGNA--SWGNQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGI 359


>gi|326335638|ref|ZP_08201825.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692404|gb|EGD34356.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 296

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 132/255 (51%), Positives = 195/255 (76%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F ++LS E D+  A L++ AGAGGTES DWA+ML+RMY  WA ++ F  + L   
Sbjct: 33  IENLEFRNMLSDEGDALSAVLQITAGAGGTESCDWASMLMRMYIMWANRQGFSVKELNYQ 92

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+ AG+K+ TL I G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+
Sbjct: 93  EGDVAGVKTVTLEIDGEFAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 152

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEIEI+ +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  
Sbjct: 153 IEIEINPADISFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 212

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +L+++LYE+EL+KR+   +  E++K +I WG QIR+YV+QPY++VKD+RTN E T+   V
Sbjct: 213 LLKSQLYEMELKKRQAKRDEIEANKMKIEWGSQIRNYVMQPYKLVKDVRTNYETTNVDAV 272

Query: 339 LDGDLDDFMKATLAI 353
           ++G++DDF+KA L +
Sbjct: 273 MNGEIDDFLKAYLML 287


>gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3]
 gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3]
          Length = 325

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/320 (46%), Positives = 201/320 (62%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + + A+   +E   L N      ++ D   ++ ILL+   E  D S+  E  + 
Sbjct: 3   EPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELVEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + F 
Sbjct: 61  LVELDKTMTAYEMTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFI 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEIEI + + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q+ 
Sbjct: 181 MPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  +L+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT  E
Sbjct: 241 NRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|241888662|ref|ZP_04775969.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
 gi|241864685|gb|EER69060.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
          Length = 372

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/336 (46%), Positives = 218/336 (64%), Gaps = 1/336 (0%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +R++ +     +   W +   A +L+ E + +   +    E+ D L  +  ++E  
Sbjct: 27  EDKTERVAEIENMMLEADFWNDSEAASLLVTESKSIKKELDEFSEMIDYLEHSEEMVEFL 86

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            +EDD  I Q+  + +  +K  VE   F  L S E D+N A LE+HAGAGGT++ DW+ +
Sbjct: 87  KDEDDEEIYQDLLETVVNLKNSVEDFSFRLLFSEEYDNNTAILEIHAGAGGTDATDWSEL 146

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           +LRMY R+  K+  K   L    G+  G+KSAT+ I+G  AYG LKGE+GVHR+VRISP+
Sbjct: 147 MLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKIEGDFAYGLLKGEKGVHRVVRISPF 206

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           D + +RHTSF+SI V P   DD I IEI+  D +IDTYRA GAGGQH+NTTDSAVRITH+
Sbjct: 207 DPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGGQHINTTDSAVRITHL 266

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+VVQ Q ERSQ KNK  A   L++KLY+LE++++E+        + +IGWG QIRSY
Sbjct: 267 PTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKEKELAAIRGEQKDIGWGSQIRSY 326

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 327 VFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|327459899|gb|EGF06239.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057]
          Length = 325

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   ++   L        ++ +   ++ ILL+  L ED+    +     
Sbjct: 3   EPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +  K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 62  AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|62184808|ref|YP_219593.1| peptide chain release factor 2 [Chlamydophila abortus S26/3]
 gi|81313013|sp|Q5L6U9|RF2_CHLAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|62147875|emb|CAH63621.1| putative peptide chain release factor 2 [Chlamydophila abortus
           S26/3]
          Length = 368

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 166/351 (47%), Positives = 225/351 (64%), Gaps = 9/351 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   G   D +   Q LS L  +T     WQ+V  A  +      L   I+  +E + R+
Sbjct: 16  LALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIVSLKRQIAHYEEFKVRV 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVH 122
            +NL      L + D S   E  ++L++     E+     + + LLSGE D N  +L ++
Sbjct: 76  -ENLAFF---LNDGDVSADPELREDLEKEFTICEHILSEWETQRLLSGEVDKNPCFLTIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+SGAGGQH
Sbjct: 192 AERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E   +   +
Sbjct: 252 VNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLLDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 312 KKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362


>gi|319442594|ref|ZP_07991750.1| peptide chain release factor 2 [Corynebacterium variabile DSM
           44702]
          Length = 356

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 217/349 (62%), Gaps = 15/349 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D D    R+  L  +  DP LW +   A+ +  +  H+ + +  ++ ++ RL D  ++
Sbjct: 1   MLDLDELDDRVRELEAQAADPSLWDDPDHAQQVTSQLSHVQSRLKKVRGLRSRLDDLPVM 60

Query: 73  LELALEEDDCSILQETSD------NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            E+A E       +           L  ++ ++E  +  ++LSGE D  +A + + + AG
Sbjct: 61  YEMADEAAVEDAAEGAEAKELADAELADLRADIESLEVTTMLSGEYDDREAVVNIRSAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ DWA ML+RMYTRWAEK   K E  +I   EEAGIKSAT ++ G   YG L  EQG
Sbjct: 121 GVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVHGDYMYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E+D R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAEVEVLPVVETSDHVDIDENDVRVDVYRSSGPGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI----GESS 302
           DSAVR+THIPTG+VV CQ E+SQ +NKA A  +L AKL  LE +++EE A +    G+ S
Sbjct: 241 DSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKL--LERKRQEEAAEMDALRGDGS 298

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +   WG Q+RSYVL PYQMVKDLRTN E   PS VLDG +D  ++A +
Sbjct: 299 NS---WGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGGIDGLLEAGI 344


>gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
          Length = 383

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 165/355 (46%), Positives = 224/355 (63%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     +L   +   +E+
Sbjct: 26  LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKITSRLSYLQGQLRKAEEL 85

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  EDD     E    L  ++  V+  +  +LLSGE DS +A + + 
Sbjct: 86  RSRIDDLEVLFELADAEDDADARAEAVAELDSVRKAVDEMEVRTLLSGEYDSREALVNIR 145

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  +    EEAGIKS T  ++ P AYG L 
Sbjct: 146 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEVYDTSYAEEAGIKSTTFAVQIPYAYGTLS 205

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ RID YR+SG GGQ 
Sbjct: 206 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQG 265

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A + ++ 
Sbjct: 266 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DAL 322

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG+LD F++A +  +K
Sbjct: 323 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 377


>gi|325694230|gb|EGD36146.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150]
          Length = 325

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   ++   L        ++ +   ++ ILL+  L ED+    +     
Sbjct: 3   EPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +  K+   Y +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + FK
Sbjct: 62  AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQVAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|332877580|ref|ZP_08445324.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684429|gb|EGJ57282.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 315

 Score =  293 bits (750), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 132/255 (51%), Positives = 193/255 (75%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   
Sbjct: 52  IEALEFRNMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+ AG+K+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+
Sbjct: 112 EGDVAGVKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEIEI+ +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  
Sbjct: 172 IEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 231

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +L+++LYE+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RT  E T    V
Sbjct: 232 LLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTGYESTDVDSV 291

Query: 339 LDGDLDDFMKATLAI 353
           ++G+LDDF+KA L +
Sbjct: 292 MNGELDDFLKAYLML 306


>gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33]
 gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33]
 gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33]
 gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33]
 gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1]
 gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14]
          Length = 325

 Score =  293 bits (750), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/320 (46%), Positives = 201/320 (62%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + + A+   +E   L N      ++ D   ++ ILL+   E  D S+  E  + 
Sbjct: 3   EPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELVEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + F 
Sbjct: 61  LVELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFI 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 121 VETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IEIEI + + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q+ 
Sbjct: 181 MPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  +L+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT  E
Sbjct: 241 NRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGDLD F+ A L
Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320


>gi|329769029|ref|ZP_08260451.1| peptide chain release factor 2 [Gemella sanguinis M325]
 gi|328839520|gb|EGF89096.1| peptide chain release factor 2 [Gemella sanguinis M325]
          Length = 372

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 155/332 (46%), Positives = 214/332 (64%), Gaps = 1/332 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR++ +     D   W +   A  L+ E + +   +     + D L  +  ++E   +E+
Sbjct: 31  QRVAEIENMMLDADFWNDSDNASALVTESKSIKKELDEFSNMLDYLEHSQEMVEFLRDEE 90

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  I  +  + +  +K  VE   F  L S E D+N+A L++HAGAGGT++ DWA ++LRM
Sbjct: 91  DKEIYNDLEETVATLKDSVEDFSFRLLFSEEYDNNNAILDIHAGAGGTDATDWAEIMLRM 150

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+  K+  K   L    G+  G+KSAT+ ++G  AYG LKGE+GVHR++RISP+D + 
Sbjct: 151 YERFFSKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLLKGEKGVHRVIRISPFDPSG 210

Query: 201 RRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           +RHTSF+SI V P   DD I IEI+  D +IDTYRA GAGGQH+NTTDSAVRITH+PTG+
Sbjct: 211 KRHTSFASIDVMPEFSDDEINIEINNDDLKIDTYRAQGAGGQHINTTDSAVRITHLPTGI 270

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VVQ Q ERSQ KNK  A   L++KLY+LEL+++E+        + +IGWG QIRSYV  P
Sbjct: 271 VVQSQAERSQIKNKDTAMKNLKSKLYQLELEEKEKELASIRGEQKDIGWGSQIRSYVFTP 330

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y MVKD RTN E ++   V+DGD+ DF+ A L
Sbjct: 331 YTMVKDHRTNYEVSTVDKVMDGDIIDFIDAYL 362


>gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
 gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
          Length = 313

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 146/306 (47%), Positives = 204/306 (66%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   ++   +++ R+     L+ELA  E D S+  + +  +Q I+ EV  ++ E
Sbjct: 1   MQRLTRLKEEVTAWNDLERRIASAAELIELAELEGDESLTADLAAEVQAIQREVAQRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D  DA+L V AG GGT++QDWA MLLRMYTRWAE+R +    +++ +GEEAGI
Sbjct: 61  ILLSGPYDDRDAFLSVQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I+GP AYG+ + E GVHRL+R+SP+++   R TSF+ + V P VDD+ E+EI  
Sbjct: 121 KSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L 
Sbjct: 181 EDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVLRARLL 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ++ E          E  +G Q+R+Y L P  +VKD RT+ E ++   VLDG++D 
Sbjct: 241 ERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDP 300

Query: 346 FMKATL 351
           F++A L
Sbjct: 301 FIEAFL 306


>gi|119358306|ref|YP_912950.1| peptide chain release factor 2 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355655|gb|ABL66526.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 363

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 150/344 (43%), Positives = 216/344 (62%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD D   +++  L   T DP  W +  EA   ++E     +      +++     
Sbjct: 17  SYGGIFDVDERKEKIDDLEKITADPGFWNDQQEANRTLKELSEHKSWTGAFDKLEAAAKT 76

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +   L +A E  D S   E   ++  I+  +   +F ++LSG+ D  +A + +HAGAGGT
Sbjct: 77  SGEELTIADELQDESFADELIASIAAIESGIAAIEFRNMLSGKDDPGNAIITIHAGAGGT 136

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GVH
Sbjct: 137 EAQDWAEMLYRMYMRWAERKGFKVFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGVH 196

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + D  + T+R+ G GGQ+VN  ++
Sbjct: 197 RLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVET 256

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I W
Sbjct: 257 AVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREIEGKKKKIEW 316

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL   + +KD RTN E+     VLDGDLD FM+  L+
Sbjct: 317 GSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDTFMEKYLS 359


>gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
 gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
          Length = 304

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 145/297 (48%), Positives = 209/297 (70%), Gaps = 2/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ +++ Q  L D   L+EL   E+D  +LQE + NL+++  +++  + + LLSG  D  
Sbjct: 1   MTQLQDWQGTLDDAEALVELLQLEEDAGLLQEAAGNLRQLNQQLDQWELQQLLSGPYDKV 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A L ++ GAGGT++QDWA MLLRMYTRW+E++ +K    E+ +G+EAGIKSATL ++G 
Sbjct: 61  GAVLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATLEVEGR 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E+G HRLVRISP+++N +R TSF+ I V P +D  +E++I ++D  I T R+
Sbjct: 121 YAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHEVELDIPDTDLEITTSRS 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREE 294
            G GGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  + + QK +E
Sbjct: 181 GGKGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKE 240

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IA+I      E  WG QIR+YV  PYQMVKDLRTN E T+   V+DG LD+F++A L
Sbjct: 241 IADI-RGDAVEAAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEAYL 296


>gi|86132182|ref|ZP_01050777.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
 gi|85817101|gb|EAQ38284.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
          Length = 316

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 138/255 (54%), Positives = 191/255 (74%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F ++LS E D     L++ AGAGGTES DWA+ML+RMY  +AEK+ +K + L   
Sbjct: 52  IEDIEFRNMLSEEGDELSCVLQITAGAGGTESCDWASMLMRMYLMYAEKQGWKVKELNFQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+ AGIK+ +L I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDS
Sbjct: 112 EGDVAGIKTVSLEIEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDS 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEIE++ +D  I T R+SGAGGQ+VN  ++ V++TH PTG+ + C   RSQH N+A+A  
Sbjct: 172 IEIELNPADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQ 231

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           MLR++LYELEL+K+ E  N  E+ K  I WG QIR+YVL PY++VKD+RT +E  +   V
Sbjct: 232 MLRSQLYELELRKQMEARNAIEADKKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAV 291

Query: 339 LDGDLDDFMKATLAI 353
           LDG++D F+K  L +
Sbjct: 292 LDGNIDLFLKGYLMM 306


>gi|19704676|ref|NP_604238.1| peptide chain release factor 2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296328111|ref|ZP_06870644.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|19714986|gb|AAL95537.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154782|gb|EFG95566.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 308

 Score =  293 bits (749), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 150/298 (50%), Positives = 211/298 (70%), Gaps = 1/298 (0%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           N +S  +++   + D  +L++  +E  + S   E S+  + +K ++E  +   LL GE D
Sbjct: 6   NIVSRYEKLATEIDDEEVLIDF-VESGETSFESELSEKHKNLKTDIEEFEINLLLDGEYD 64

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L++
Sbjct: 65  MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLVE 124

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+  D RIDTY
Sbjct: 125 GINAYGYLKSEKGIHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPVDIRIDTY 184

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELEL+K+E
Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKKE 244

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DGD+D F+ + L
Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGDIDGFINSYL 302


>gi|169832218|ref|YP_001718200.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639062|gb|ACA60568.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 330

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 158/324 (48%), Positives = 208/324 (64%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  WQ    A+ + R    L   +     ++    D  +LLEL  E +D    +E   
Sbjct: 2   ETPDFWQQQERAQEVTRRLAGLRQQVEVFDTLRRDFEDAAVLLELGEEIEDPDTAREVER 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           +L  +   V   + E LLSG  D  +A L +HAGAGG E+QDW  ML RMY RWAEKR +
Sbjct: 62  SLAELGRRVAALELELLLSGPYDEANAILSLHAGAGGLEAQDWVEMLFRMYLRWAEKRGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+I   +EAG+K+ T L+ GP AYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+ 
Sbjct: 122 AVEVLDILPDDEAGLKNVTFLVSGPMAYGYLRAEKGVHRLVRISPFDAGGRRHTSFASLD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P V ++  I+I+  D RIDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ 
Sbjct: 182 VLPEVAENTAIDINPEDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQI 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+  A  +L+A+L +LEL++REE        + +I WG QIRSYV  PY MVKD RT  
Sbjct: 242 ANRNAAMKLLKARLLDLELRRREEEIAALRGEQPDIAWGSQIRSYVFHPYSMVKDHRTKF 301

Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354
           EK +   V+DG++D+F++A L  K
Sbjct: 302 EKGNVDAVMDGEIDEFIQAYLVWK 325


>gi|163788169|ref|ZP_02182615.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
 gi|159876489|gb|EDP70547.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
          Length = 315

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 137/275 (49%), Positives = 202/275 (73%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D + ++   +  ++    +E  +F+++LS E DS  A L++ AGAGGTES DWA+ML+
Sbjct: 32  KEDEAPMENVENRFEKAVNAIEKLEFKNMLSEEGDSLSAVLQITAGAGGTESCDWASMLM 91

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY  +AEK  FK + L   +G+ AGIK+ TL I+G  A+GWLKGE GVHRLVRISP+DS
Sbjct: 92  RMYLMYAEKSGFKVKELNHQEGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDS 151

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N++RHTSF+S++VYP+VDDSIEIEI+ +D  I T R+SGAGGQ+VN  ++ V++ H P+G
Sbjct: 152 NAKRHTSFASVYVYPLVDDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLHHKPSG 211

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + +QC + RSQH N+ +A  ML+++LYE+ELQK+    +  E+ K +I WG QIR+YV+ 
Sbjct: 212 IQIQCSETRSQHDNRTRAMQMLKSQLYEIELQKQMAQRDDIEAGKMKIEWGSQIRNYVMH 271

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           PY++VKD+R+  E  +   V+DGD++ F+KA L +
Sbjct: 272 PYKLVKDVRSAHETGNVDAVMDGDIEPFLKAYLMM 306


>gi|311086167|gb|ADP66249.1| peptide chain release factor 2 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 133/247 (53%), Positives = 185/247 (74%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S + D  D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIK
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S+T+ + G  A+GW + E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ S
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++++K++E     E +K++I WG QIRSY+L   + +KDLRT +EK     VLDGDLDDF
Sbjct: 181 IQMRKKQEEKQKIEQNKSDITWGNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDF 239

Query: 347 MKATLAI 353
           ++ +L +
Sbjct: 240 IEQSLIM 246


>gi|221217380|ref|ZP_03588851.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
 gi|221192658|gb|EEE18874.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
          Length = 348

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 158/345 (45%), Positives = 224/345 (64%), Gaps = 8/345 (2%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ D
Sbjct: 4   TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAG 126
              L E+A  E D + L+     ++   LE +YK     S    E D+N+A+L +H+GAG
Sbjct: 64  LSDLFEIAENEKDTNGLE-----IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G
Sbjct: 119 GTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVG 177

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T
Sbjct: 178 IHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKT 237

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI
Sbjct: 238 SSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEI 297

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 298 SWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342


>gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
 gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
          Length = 368

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 156/354 (44%), Positives = 218/354 (61%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D      +++ L  +   P LW +  +A+ +  +   L   ++    +
Sbjct: 12  LRTTMASIEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFSTL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             RL D  +L EL   E D   L E    L  +   V   +  +LLSGE D+ +A + + 
Sbjct: 72  NRRLEDIEVLFELGQSEGDEDALAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTLR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A MLLRMYTRWAE+  ++ E  +    EEAGIKSATL +K P AYG L 
Sbjct: 132 AEAGGVDAADFAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E + R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+P+G+VV CQ ERSQ +N+A A  +L+AKL  L+ ++ EE A +    
Sbjct: 252 VNTTDSAVRITHLPSGIVVSCQNERSQIQNRASAMAVLQAKL--LQRRREEEQAKMDALK 309

Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               G WG Q+RSYVL PYQ+VKDLRTN E  + + VLDGD+D+F++A +  +K
Sbjct: 310 DDSSGSWGNQMRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWRK 363


>gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
 gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
          Length = 372

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 166/351 (47%), Positives = 219/351 (62%), Gaps = 12/351 (3%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKML----MRERQHLDNAISFIKE 61
           QL  L    D       ++ L  +   P  W +  +A        R  + LD   + + +
Sbjct: 23  QLTLLADYVDPKALEAHVAELEQEMGAPGFWDSQEKAAKTSAEHARASRKLDTYRTLVSD 82

Query: 62  IQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++D       L  LA + ++D  +  E ++ +   +  +E  + E L SG  D  DA + 
Sbjct: 83  VED-------LEPLAEMAQEDPELEAELAEQIASAERRLEQLEEERLFSGRYDGGDALVT 135

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V+AGAGGT++QDWA M+LRM  RWAEKR F  E LE+  GEEAGIKSAT  +KG NAYG 
Sbjct: 136 VNAGAGGTDAQDWAEMVLRMEMRWAEKRGFDVELLEVSAGEEAGIKSATFRVKGENAYGL 195

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
              E+GVHRLVR+SP+DS +RR TSF+ + V PVV+D+ E+EI + D ++DTYRASGAGG
Sbjct: 196 YGAEKGVHRLVRLSPFDSANRRQTSFAGVEVAPVVEDAAEVEIDDDDLQVDTYRASGAGG 255

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSAVRITH P+G+VVQCQ ERSQ  N+A A  MLR+KL ELE ++R+E     +
Sbjct: 256 QHVNKTDSAVRITHRPSGIVVQCQNERSQSSNRATAMAMLRSKLVELEERRRQEEIAKEK 315

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               ++ +G QIRSYVL PY MVKD RT  E      VLDGDLD F++A L
Sbjct: 316 GEAQDVNFGSQIRSYVLHPYSMVKDHRTEFEIGDTGRVLDGDLDGFVRAYL 366


>gi|15610242|ref|NP_217621.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Rv]
 gi|31794284|ref|NP_856777.1| peptide chain release factor 2 [Mycobacterium bovis AF2122/97]
 gi|121638990|ref|YP_979214.1| peptide chain release factor 2 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662959|ref|YP_001284482.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148824297|ref|YP_001289051.1| peptide chain release factor 2 [Mycobacterium tuberculosis F11]
 gi|167969713|ref|ZP_02551990.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|215405101|ref|ZP_03417282.1| peptide chain release factor 2 [Mycobacterium tuberculosis 02_1987]
 gi|215412969|ref|ZP_03421670.1| peptide chain release factor 2 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428558|ref|ZP_03426477.1| peptide chain release factor 2 [Mycobacterium tuberculosis T92]
 gi|215432061|ref|ZP_03429980.1| peptide chain release factor 2 [Mycobacterium tuberculosis EAS054]
 gi|215447387|ref|ZP_03434139.1| peptide chain release factor 2 [Mycobacterium tuberculosis T85]
 gi|218754875|ref|ZP_03533671.1| peptide chain release factor 2 [Mycobacterium tuberculosis GM 1503]
 gi|224991482|ref|YP_002646171.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253797794|ref|YP_003030795.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|254233729|ref|ZP_04927054.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|254365733|ref|ZP_04981778.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254552185|ref|ZP_05142632.1| peptide chain release factor 2 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188141|ref|ZP_05765615.1| peptide chain release factor 2 [Mycobacterium tuberculosis CPHL_A]
 gi|260202247|ref|ZP_05769738.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289444669|ref|ZP_06434413.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289448784|ref|ZP_06438528.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289553103|ref|ZP_06442313.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289571312|ref|ZP_06451539.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289575817|ref|ZP_06456044.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289746915|ref|ZP_06506293.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289751781|ref|ZP_06511159.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289755223|ref|ZP_06514601.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289759231|ref|ZP_06518609.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|289763284|ref|ZP_06522662.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|294993388|ref|ZP_06799079.1| peptide chain release factor 2 [Mycobacterium tuberculosis 210]
 gi|297635740|ref|ZP_06953520.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732739|ref|ZP_06961857.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526578|ref|ZP_07013987.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777415|ref|ZP_07415752.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|313660071|ref|ZP_07816951.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2076680|emb|CAB08395.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           tuberculosis H37Rv]
 gi|31619879|emb|CAD96819.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           bovis AF2122/97]
 gi|121494638|emb|CAL73119.1| Probable peptide chain release factor 2 prfB [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599258|gb|EAY58362.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|134151246|gb|EBA43291.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148507111|gb|ABQ74920.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148722824|gb|ABR07449.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           F11]
 gi|224774597|dbj|BAH27403.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319297|gb|ACT23900.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|289417588|gb|EFD14828.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289421742|gb|EFD18943.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437735|gb|EFD20228.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289540248|gb|EFD44826.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289545066|gb|EFD48714.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289687443|gb|EFD54931.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289692368|gb|EFD59797.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289695810|gb|EFD63239.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289710790|gb|EFD74806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|289714795|gb|EFD78807.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|298496372|gb|EFI31666.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214303|gb|EFO73702.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|326902672|gb|EGE49605.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           W-148]
 gi|328457573|gb|AEB02996.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           4207]
          Length = 378

 Score =  292 bits (748), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 162/350 (46%), Positives = 225/350 (64%), Gaps = 8/350 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E++ RL
Sbjct: 23  LTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRL 82

Query: 67  CDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +L ELA EE   +     ++    L+ ++ ++E  +  +LLSGE D  +A + + +
Sbjct: 83  DDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRS 142

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L  
Sbjct: 143 GAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSV 202

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ V
Sbjct: 203 EQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSV 262

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + ++ K
Sbjct: 263 NTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKL--LERKRLEERAEL-DALK 319

Query: 304 TEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +
Sbjct: 320 ADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGI 369


>gi|219559147|ref|ZP_03538223.1| peptide chain release factor 2 [Mycobacterium tuberculosis T17]
 gi|260206441|ref|ZP_05773932.1| peptide chain release factor 2 [Mycobacterium tuberculosis K85]
 gi|308369955|ref|ZP_07419655.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308371233|ref|ZP_07424282.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308372424|ref|ZP_07428636.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308373628|ref|ZP_07433110.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308374772|ref|ZP_07437352.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308375989|ref|ZP_07668163.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308377222|ref|ZP_07668462.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308378190|ref|ZP_07481848.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308379411|ref|ZP_07486192.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308380571|ref|ZP_07490411.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308406052|ref|ZP_07494953.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|54039054|sp|P66027|RF2_MYCBO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041597|sp|P66026|RF2_MYCTU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|308325955|gb|EFP14806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308329480|gb|EFP18331.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308333326|gb|EFP22177.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308336980|gb|EFP25831.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308340794|gb|EFP29645.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308344662|gb|EFP33513.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308348612|gb|EFP37463.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308353337|gb|EFP42188.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308357171|gb|EFP46022.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308361122|gb|EFP49973.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308364657|gb|EFP53508.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|323718336|gb|EGB27514.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CDC1551A]
          Length = 371

 Score =  292 bits (748), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 162/350 (46%), Positives = 225/350 (64%), Gaps = 8/350 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E++ RL
Sbjct: 16  LTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRL 75

Query: 67  CDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +L ELA EE   +     ++    L+ ++ ++E  +  +LLSGE D  +A + + +
Sbjct: 76  DDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRS 135

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L  
Sbjct: 136 GAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSV 195

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ V
Sbjct: 196 EQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSV 255

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + ++ K
Sbjct: 256 NTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKL--LERKRLEERAEL-DALK 312

Query: 304 TEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +
Sbjct: 313 ADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGI 362


>gi|311086739|gb|ADP66820.1| peptide chain release factor 2 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  292 bits (748), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 133/247 (53%), Positives = 185/247 (74%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S + D  D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIK
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S+T+ + G  A+GW + E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ S
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++++K++E     E +K++I WG QIRSY+L   + +KDLRT +EK     VLDGDLDDF
Sbjct: 181 IQIRKKQEEKQKIEQNKSDITWGNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDF 239

Query: 347 MKATLAI 353
           ++ +L +
Sbjct: 240 IEQSLIM 246


>gi|319760398|ref|YP_004124336.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039112|gb|ADV33662.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 265

 Score =  292 bits (748), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 145/246 (58%), Positives = 182/246 (73%), Gaps = 4/246 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSAT 169
           E D+ + Y+++ +G+GG E+QDWANMLLRMY +W + +K F  +      GE  GIKSAT
Sbjct: 18  EHDNCNCYVDIQSGSGGIEAQDWANMLLRMYLKWLDSKKGFYVKKTTETSGEFLGIKSAT 77

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + I GP AYGWLK E GVHRLVR SP+DS  RRHTSF+SI+VYP +DD+I I I   D R
Sbjct: 78  IKIIGPYAYGWLKTESGVHRLVRKSPFDSGGRRHTSFASIFVYPELDDNITINIRPEDLR 137

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +D YRASGAGGQHVN T+SAVR+THIPT VV QCQ +RSQHKNK QA   L+AKLY LEL
Sbjct: 138 VDVYRASGAGGQHVNRTESAVRVTHIPTNVVTQCQSDRSQHKNKNQAIKQLKAKLYNLEL 197

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           QK++    I E+ K +I WG QIRSY+L   + +KDLRT +EK +   VL+GDLDDF+  
Sbjct: 198 QKKQYEKKIRENKKLDITWGSQIRSYILDDSR-IKDLRTGLEKRNVKAVLNGDLDDFV-- 254

Query: 350 TLAIKK 355
           T++IK+
Sbjct: 255 TMSIKQ 260


>gi|194333053|ref|YP_002014913.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
 gi|194310871|gb|ACF45266.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
          Length = 381

 Score =  292 bits (747), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 152/346 (43%), Positives = 222/346 (64%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           LN  GG+FD D  ++++  L   T +P  W +  EA  +++E           ++I   +
Sbjct: 34  LNSYGGIFDIDERLKKIEELEQITAEPDFWNDQKEAHRIVKEINEHKTWTDDFQKIAADV 93

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                 +E+A E +D S+  E +  +  I+ E+   + +++LSG+ D  +A L ++AGAG
Sbjct: 94  ASRQEEVEIAEELEDESLGSEIAGGIDSIEKEITALESKNMLSGKDDPGNALLTINAGAG 153

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY RWAE++ +K    +  +GE AGIK+ATL I GP AYG+LK E G
Sbjct: 154 GTEAQDWAQMLYRMYMRWAERKGYKVFMDDYQEGEGAGIKTATLEIVGPYAYGYLKAENG 213

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DSN+RRHTSF+S++ YP      EI+I + D  + T+R+ G GGQ+VN  
Sbjct: 214 VHRLVRVSPFDSNARRHTSFASVYTYPEAPPDAEIDIRKEDLELSTFRSGGKGGQNVNKV 273

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ E      E  K +I
Sbjct: 274 ETAVRIKHIPSGIVVSCQQERSQFQNRERAIKMLMAQLYKKQREEEEARKQAVEGQKMKI 333

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV+   + +KD RTN E+     VLDGD+DDF++  L+
Sbjct: 334 EWGSQIRSYVMDD-RRIKDHRTNHERHDIEAVLDGDIDDFIEKYLS 378


>gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
 gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
          Length = 332

 Score =  292 bits (747), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 211/322 (65%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ L+ +   L         ++D+L D    LEL   E D  + +E + + 
Sbjct: 4   PDFWNDNERAQKLINDNNDLKAKRDTYVALRDQLADLETNLELLELEPDPELEKEFATSF 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            + +  ++  +   LLS + DS +A LE+H GAGGTE+QDW  MLLRMY RWAE+     
Sbjct: 64  AQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHGLTV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E      GE AGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+DS  RRHTSF+S+ V 
Sbjct: 124 ETANYEPGEVAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASVDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ  N
Sbjct: 184 PELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQLLN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD R+  E 
Sbjct: 244 RQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSGHET 303

Query: 333 TSPSDVLDGDLDDFMKATLAIK 354
            +   V+DGDLD F+ A L  K
Sbjct: 304 HNGQAVMDGDLDPFINAYLQWK 325


>gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
 gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  292 bits (747), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 157/359 (43%), Positives = 224/359 (62%), Gaps = 10/359 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDN 54
           +L R++  +G           L  L  K +D       P  W +   A+  ++E   L +
Sbjct: 5   ELKREIELIGSRLGKTQDYLDLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKS 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
           A+   ++ Q +L D   ++EL   E+D S+L+E   NL+++  E+E  + + LLSG  D+
Sbjct: 65  ALELYQQWQTQLEDAKAIVELLELEEDTSLLEEAQTNLEQLNHELERWELQQLLSGLYDA 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
             A L ++AGAGGT++QDWA MLLRMYTRW EK+ +K    EI +G+EAG+KSATL I+G
Sbjct: 125 KGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAEISEGDEAGLKSATLEIEG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTY 233
             AYG+LKGE+G HRLVRISP+++N +R TSF+ + V P +  +++ +EI E D  I T 
Sbjct: 185 RYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITTS 244

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK-AQAWNMLRAKLYELELQKR 292
           R+ G GGQ+VN  ++AVR+ HIPTG+ V+C QERSQ +NK      +    L  L  Q+ 
Sbjct: 245 RSGGKGGQNVNKVETAVRVVHIPTGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQRA 304

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +EIA I      E  WG QIR+YV  PYQMVKDLRTN+E +    V+DGDL+ F++A L
Sbjct: 305 KEIAQI-RGDMVEAAWGNQIRNYVFHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYL 362


>gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
 gi|238688991|sp|B1VV08|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
          Length = 368

 Score =  291 bits (746), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 158/355 (44%), Positives = 223/355 (62%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L+ ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAADEGDADAQAEAEAELESVRKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +  + 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
 gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
          Length = 372

 Score =  291 bits (746), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 157/351 (44%), Positives = 217/351 (61%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   +  +G + D D   + ++ L  +   P LW +   A  +      L   ++   E
Sbjct: 12  QLQATMQTIGQVLDLDAMRKEIADLGEQVAAPDLWDDQDNATRVTGRLSLLQGELNKFTE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  +++E+A EE D   L E+   L R+K  VE  +  +LLSGE DS +A + +
Sbjct: 72  LSSRIEDLELMVEMAQEEGDADTLAESEAELGRVKKAVESLEIRTLLSGEYDSREALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML+RMY RWAE+ K+  E  +    EEAG+KSAT  I  P AYG L
Sbjct: 132 RSGAGGVDAADFAEMLMRMYVRWAERNKYPVEVFDTSYAEEAGLKSATFAIHAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EIEI E+D ++D YR+SG GGQ
Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIKVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A  M+  K   L L+K EE A + E 
Sbjct: 252 SVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAA--MIVLKAKLLALKKAEEEAQLKEL 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  WG Q+R+YVL PYQ+VKDLRT  E  +P  V DGD+D F++A +
Sbjct: 310 KGDVAASWGDQMRNYVLNPYQIVKDLRTTYEVGNPQAVFDGDIDGFLEAGI 360


>gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
 gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
          Length = 372

 Score =  291 bits (746), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 161/350 (46%), Positives = 213/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 13  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 73  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P +DD  IEIEI   D ++D YR+ GAGGQ
Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L
Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYL 362


>gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1]
 gi|122277196|sp|Q04GC3|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni
           PSU-1]
          Length = 372

 Score =  291 bits (746), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 161/350 (46%), Positives = 213/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 13  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 73  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P +DD  IEIEI   D ++D YR+ GAGGQ
Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L
Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYL 362


>gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810]
 gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium
           faecium DSM 4810]
          Length = 371

 Score =  291 bits (746), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 148/351 (42%), Positives = 222/351 (63%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L+ +  + D D    +++ L  +     LW +V  A+ +     H  +    I E
Sbjct: 12  QLRSTLSSIEQVTDIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  ++++LA EEDD   L+E  + L  I   ++  +  +LLSGE D  DA + +
Sbjct: 72  LDSRIEDLEVMVQLAAEEDDADTLEEAENELVSIHKTLDELEVRTLLSGEYDERDAVITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KS T  +  P AYG L
Sbjct: 132 RAGAGGVDAADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI E+D ++D +R+SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVR+TH+PTG VV  Q E+SQ +N+A A  +++++L  L L+K EE A   E 
Sbjct: 252 SVNTTDSAVRMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRL--LLLKKAEEAAERKEL 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   +  WG Q+RSYVL PYQMVKDLRT+ ++ +PS V DG++D+F+ A +
Sbjct: 310 AGDVKASWGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGI 360


>gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
 gi|158433669|gb|EDP11958.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
          Length = 346

 Score =  291 bits (746), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 155/342 (45%), Positives = 219/342 (64%), Gaps = 8/342 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD      ++  L  +T +   W +   A+ L+++   L + +   +++   L      L
Sbjct: 4   FDLAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGMEETL 63

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  ++ D  I +     ++  ++E  ++QFE   LLS E D ++A LE+H GAGGTES 
Sbjct: 64  TLLKDDFDTEIFELL--EMEYHEMEERFEQFELKMLLSHEYDHSNAILELHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY+RWAEK+ +K   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS  RRHTSF+S+ V P  +D IEIEI   D  ++T RASGAGGQH+N TDSA+R
Sbjct: 182 RISPFDSGGRRHTSFASLDVMPQFNDEIEIEIRPEDLIVETKRASGAGGQHINKTDSAIR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWG 309
           + H PTG+V  CQ  RSQH+N+ +A  +L++++Y+  ++++E +IA I GE    E  WG
Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANE--WG 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV  PY MVKD RT  E +    V+DG+LD F+ A L
Sbjct: 300 SQIRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYL 341


>gi|225020766|ref|ZP_03709958.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946468|gb|EEG27677.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 368

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 155/331 (46%), Positives = 218/331 (65%), Gaps = 5/331 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  DP LW +   A+ +  E   +   +  ++ ++ RL D  I+ ELA EE + + +
Sbjct: 35  LAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSLRSRLTDLPIMYELAEEEGEGADI 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +  + L  ++ +++  +  ++LSGE DS +A + + +GAGG ++ DWA ML+RMY RWA
Sbjct: 95  AD--EELADLRADIDALEVTTMLSGEYDSREALINIRSGAGGVDAADWAEMLMRMYIRWA 152

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK+  K E  +I   EEAGIKSAT ++ G   YG L  EQGVHRLVRISP+D+ +RR TS
Sbjct: 153 EKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLSVEQGVHRLVRISPFDNQARRQTS 212

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+ + V PVV+ +  I+I +S+ R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ 
Sbjct: 213 FAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQN 272

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           E+SQ +NKA A  +L+AKL E + Q +R E+  +G        WG Q+R+YVL P+QMVK
Sbjct: 273 EKSQIQNKASALRVLQAKLLERKRQEERAELDALGAGGNA--SWGNQMRNYVLHPFQMVK 330

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           DLRT  E   P  VLDGDLD F++A +  +K
Sbjct: 331 DLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361


>gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
 gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
          Length = 339

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/324 (46%), Positives = 217/324 (66%), Gaps = 9/324 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETS 89
           P+ W +  +A+  +   Q L +  S +++ QD    L D   + EL   EDD S+ QE  
Sbjct: 8   PNFWDDQTQAQKTL---QTLSDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAE 64

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            N+  +  +++  + + LLSG  D + A L ++AGAGGT++QDWA MLLRMYTRW E + 
Sbjct: 65  SNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQG 124

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K    EI +G+EAGIKSATL ++GP AYG+LK E+G HRLVRISP+++N +R TSF+ +
Sbjct: 125 YKVHLAEISEGDEAGIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGV 184

Query: 210 WVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            + P++D+ +I ++I E D  I T RA G GGQ+VN  ++AVRI HIPTG+ V+C QERS
Sbjct: 185 EIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERS 244

Query: 269 QHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           Q +N+ +A  +L+AKL  +  ++R + IA I      E  WG QIR+YV  PYQMVKDLR
Sbjct: 245 QLQNREKAMALLKAKLLVVAQEQRAQAIAEI-RGDLVEAAWGNQIRNYVFHPYQMVKDLR 303

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  E T+ +DV++G+LD F++A L
Sbjct: 304 TGEETTAINDVMNGELDGFIQAYL 327


>gi|224534879|ref|ZP_03675448.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
 gi|224513819|gb|EEF84144.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
          Length = 350

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 163/359 (45%), Positives = 229/359 (63%), Gaps = 36/359 (10%)

Query: 9   CLGGLFD----------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
             GG FD          ++  + + +F N    DP   Q VI+A+ +++ +  +D  +  
Sbjct: 6   TFGGSFDKKEIQAKIEKYEKEINQKNFWN----DPKKAQKVIKAQRILKNK--VDPWVEL 59

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLS-----GEA 112
           I +I+D   D+L           C I++   D N   I+  V  KQ++ LL+      E 
Sbjct: 60  INKIKD--LDDL-----------CEIIENEKDINSLEIEFNVLEKQYKDLLTISYFKEEL 106

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N A+L +H+GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ I
Sbjct: 107 DANGAFLTIHSGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AYG LK E G+HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDT
Sbjct: 166 KGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K 
Sbjct: 226 YRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKE 285

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +E     + +K EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 286 DEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344


>gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
 gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
          Length = 338

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 152/327 (46%), Positives = 212/327 (64%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +  DP  W +   AK + +E   L   +    ++ +   D   L +LA E++D S   E 
Sbjct: 2   RMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGEI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                R+  E+E ++   LLSGE DS +A +  HAGAGGTE+QDW  M++RMY+RWAE+ 
Sbjct: 62  ERQYYRLVKELEKREVLLLLSGEYDSCNAIMAFHAGAGGTEAQDWTQMIVRMYSRWAEQH 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +    ++   G+EAG KS    ++G NAYG+LK E+GVHRLVRISP+D+N RRHTSF++
Sbjct: 122 GYTIRMIDYQPGDEAGTKSCAFTVEGENAYGYLKSEKGVHRLVRISPFDTNGRRHTSFTA 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P + D  E+EI+  D R+D +RASGAGGQHVN T SAVR+THIPTG+VVQCQ ERS
Sbjct: 182 VDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+      LRAKL+ELE +K+E++      ++  I WG QIRSYV  PY +VKD RT
Sbjct: 242 QIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQQSIEWGSQIRSYVFHPYNLVKDHRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +E ++   V+DG++D F++  L   K
Sbjct: 302 GVETSNIQSVMDGNIDMFIEGYLQFLK 328


>gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58]
 gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58]
          Length = 373

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/350 (43%), Positives = 221/350 (63%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++ELA EED+ S+L++ +  L  I+  +E  +  +LLSGE D  DA + + 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLEDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A  L+RMY RWAE+R + T+ ++    EEAG+KS T  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L L+K EE A   E +
Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLLRKAEEDAKKKEMA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +
Sbjct: 311 GDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGI 360


>gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
 gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
          Length = 366

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 218/325 (67%), Gaps = 2/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT  P  W +  +A+M M+E + +   I   + ++    D  +L+E   +E + S  +  
Sbjct: 36  KTASPDFWDDPKKAEMFMKELRSIKKWIEDYESVEQAANDLEVLIEFN-KEGEVSDEEVQ 94

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
               + IKL +E  +F+++LS E D+  A L++ AGAGGTES DWA+ML+RMY  WAE  
Sbjct: 95  EHYSKTIKL-LENIEFKNMLSDEGDNLGAILQITAGAGGTESCDWASMLMRMYLMWAESH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K   L    G+ AG+K+ TL I G  A+GWLKGE GVHRLVRISP+DSN++RHTSF S
Sbjct: 154 GYKVRELNFQAGDVAGVKTVTLEIDGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFVS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            +V P+VD++IEI+I+ +D  + T R+ GAGGQ+VN  ++ V++TH PTG+VV CQ ERS
Sbjct: 214 AYVSPMVDETIEIDINPADIEMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVICQIERS 273

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q  N+ +A  ML+++LY++EL K+    N  ES+K +I WG QIR+YV+ PY++VKD+RT
Sbjct: 274 QLANRERAMEMLKSELYKIELDKKMAARNEIESNKMKIEWGSQIRNYVMHPYKLVKDVRT 333

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
             E  +   V++GD+D F+K+ L +
Sbjct: 334 GTETGNVDAVMNGDIDQFLKSYLML 358


>gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
 gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
          Length = 371

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 213/328 (64%), Gaps = 1/328 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           +++ L+ +   P+LW +   A+ +        + +  + +++ R+ D   L+E+A EEDD
Sbjct: 32  KIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDKLRGRIDDLETLVEMAAEEDD 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L E    L  I+ ++   +  +LL+GE D  DA + + AGAGG ++ D+A MLLRMY
Sbjct: 92  ADTLAEAEAELVGIRKDLGELEIRTLLAGEYDVRDAVVTIRAGAGGVDAADFAEMLLRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE+  + T  L+    EEAG+KSAT  +K P A+G L  E G HRLVRISP+D+  R
Sbjct: 152 LRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHLSVEAGTHRLVRISPFDNQGR 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV
Sbjct: 212 RQTSFAAVEVIPLIEQTDSVEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
             Q E+SQ +N+A A  +L+++L  L  Q+ E  A    +   +  WG Q+RSYVLQPYQ
Sbjct: 272 SMQNEKSQIQNRAAALRVLQSRLL-LVRQEEERAAKKELAGDIKASWGDQMRSYVLQPYQ 330

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           MVKDLRT  E  +P+ V DGD+DDF++A
Sbjct: 331 MVKDLRTEHEVGNPASVFDGDIDDFIEA 358


>gi|29839933|ref|NP_829039.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
 gi|29834280|gb|AAP04917.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
          Length = 337

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 165/340 (48%), Positives = 218/340 (64%), Gaps = 19/340 (5%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  +T     WQ+V  A  +      L   IS  +E + ++ DNL      L + + 
Sbjct: 1   MTELEDQTLKEDFWQDVAHAGKVSERVASLKRQISDYEEFKSKV-DNLTFF---LNDSEA 56

Query: 83  SILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDW 133
           S     SD   R  LE E+   E+         LLSGE D N  +L ++AGAGGTES DW
Sbjct: 57  S-----SDPELREDLEKEFSVCETILAEWETQRLLSGEVDKNPCFLTINAGAGGTESCDW 111

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             ML RMY+RWA   ++K E ++  +G+ AGIK  T+   G  AYG+ K E+GVHRLVRI
Sbjct: 112 VEMLFRMYSRWASHHQWKAEVIDRQEGDVAGIKHITVKFSGEYAYGYAKAERGVHRLVRI 171

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDTYR+SGAGGQHVN TDSAVRIT
Sbjct: 172 SPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTYRSSGAGGQHVNVTDSAVRIT 231

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG++V CQ ERSQ +N+     MLRA++Y+  LQ+R E   +   +K EI WG QIR
Sbjct: 232 HIPTGIIVSCQSERSQIQNRESCMKMLRARMYQQVLQERLEKQLLDRKNKKEIAWGSQIR 291

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           +YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 292 NYVFQPYTLVKDMRTGHETGNVQAMMDGELLDDFVKAYLA 331


>gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415]
 gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415]
          Length = 326

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 147/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W + I A+   +E   L        ++++   ++ + LE+   E+D S+  +  + 
Sbjct: 3   EPDFWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEML--EEDASVQGDLEET 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMY R+   + FK
Sbjct: 61  LAKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNAKGFK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+SI V
Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSIEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q+ 
Sbjct: 181 MPELDDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RT  E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V+DGD+D F+ A L
Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320


>gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
 gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
          Length = 378

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 161/350 (46%), Positives = 213/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 19  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 79  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 138

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 139 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 198

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P +DD  IEIEI   D ++D YR+ GAGGQ
Sbjct: 199 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 258

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 259 NVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 318

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L
Sbjct: 319 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYL 368


>gi|225549349|ref|ZP_03770322.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
 gi|225370207|gb|EEG99647.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
          Length = 348

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/348 (45%), Positives = 226/348 (64%), Gaps = 14/348 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ D
Sbjct: 4   TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123
              L E+A  E D + L+   + L+        KQ++ LL+      E D+N+A+L +H+
Sbjct: 64  LSDLCEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHS 115

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK 
Sbjct: 116 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 174

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHV
Sbjct: 175 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHV 234

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K
Sbjct: 235 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTK 294

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 295 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342


>gi|259502724|ref|ZP_05745626.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
 gi|259169369|gb|EEW53864.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
          Length = 332

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/322 (48%), Positives = 210/322 (65%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ L+ +   L         ++D+L D    LEL   E D  + QE + + 
Sbjct: 4   PGFWDDNEKAQQLINDNNDLKEKRDTYVALRDQLADLETNLELLELEPDPDLEQEFAASF 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            +    ++  +   LLS + D  +A LE+H GAGGTE+QDW  MLLRMY RWAE+     
Sbjct: 64  AKTTEALQQYRLSQLLSEKYDGKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHGLTV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E      GE AG+KS TLLIKG NA+G+L+ E+GVHRLVRISP+DS  RRHTSF+S+ V 
Sbjct: 124 ETANYEPGEVAGVKSVTLLIKGRNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASVDVM 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ  N
Sbjct: 184 PELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQLLN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD R+  E 
Sbjct: 244 RQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSGYET 303

Query: 333 TSPSDVLDGDLDDFMKATLAIK 354
            +   V+DG+LD F+ A L  K
Sbjct: 304 HNGQAVMDGELDPFINAYLQWK 325


>gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 346

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/342 (46%), Positives = 217/342 (63%), Gaps = 8/342 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD      ++  L  KT +   W +  +A++++R+   + + +     +Q  L       
Sbjct: 4   FDLTARRYKIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDETQ 63

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQ 131
           EL  E+ D  I +      Q  ++E  +  FE   LLS E D + A LE+H GAGGTES 
Sbjct: 64  ELLKEDFDEEIFELFELEYQ--EMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY+RWAEK +FK   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWADMLYRMYSRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D+  RRHTSF+S+ V P  +D IEIEI   D  ++T RASGAGGQH+N TDSAVR
Sbjct: 182 RISPFDAGGRRHTSFASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWG 309
           + H PTG+V  CQ  RSQH+N+ +A  +L+++LY+  ++++E ++A I GE    E  WG
Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANE--WG 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV  PY MVKD RTN E +    V+DGDLD F+ A L
Sbjct: 300 SQIRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYL 341


>gi|323342407|ref|ZP_08082639.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463519|gb|EFY08713.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 347

 Score =  291 bits (744), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 151/284 (53%), Positives = 193/284 (67%), Gaps = 11/284 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTES 130
           D   +L+E +D   +  LEVE K+ +          LLS + D  +A +E+H GAGGTES
Sbjct: 61  DSILLLKEEADEEFQNSLEVEVKEIQKEMESFSVLVLLSHDYDQKNAIVEIHPGAGGTES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QD+A ML RMYTRWA+   FK   L   DG+EAG+KS +  + G  AYG+LK E+GVHRL
Sbjct: 121 QDFAEMLYRMYTRWAQDHGFKISVLNYLDGDEAGLKSVSFSVSGMFAYGYLKAEKGVHRL 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS+ RRHTSF+S+ V P  D+SIEI I   D  +DT RA+GAGGQHVN TDSAV
Sbjct: 181 VRISPFDSSGRRHTSFASVDVAPEFDNSIEITILPEDIDVDTMRATGAGGQHVNKTDSAV 240

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG 309
           RITH  TG+VV CQ  RSQ +N+ +A  ML++KLY+ E+ +K+ ++A I    K  I WG
Sbjct: 241 RITHKKTGIVVTCQAGRSQLQNREEALMMLKSKLYQREIEEKQAQLAAIKGEHKL-IEWG 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYV  PY MVKD RT  E +   DVLDGD+DDF++A L +
Sbjct: 300 SQIRSYVAHPYTMVKDHRTKFETSQYGDVLDGDIDDFIEAFLKM 343


>gi|315658891|ref|ZP_07911758.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
 gi|315496015|gb|EFU84343.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
          Length = 334

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 158/322 (49%), Positives = 217/322 (67%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W +  +A+ ++ +   L        ++ + + D     EL  EE D  +  E   N
Sbjct: 4   EPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAELEMN 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +     +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+  FK
Sbjct: 64  VLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   ++ IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 184 IPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++ +E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAQEMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F++A L
Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324


>gi|330444184|ref|YP_004377170.1| peptide chain release factor 2 [Chlamydophila pecorum E58]
 gi|328807294|gb|AEB41467.1| Peptide chain release factor 2 [Chlamydophila pecorum E58]
          Length = 344

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/337 (46%), Positives = 217/337 (64%), Gaps = 19/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  ++   + W++V++A  +  +   L   +S   E+Q ++      +E  L +++    
Sbjct: 11  LEKQSAQENFWEDVVKAGKISEQIAALKRQLSEYSELQKKI----ETIEFFLNDNEACAD 66

Query: 86  QETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E    L++     E+   ES         LLSGE D N  +L ++AGAGGTES DW  M
Sbjct: 67  PEVGKELEK-----EFAFCESCLAVWETQRLLSGEVDKNSCFLSINAGAGGTESCDWVEM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+RWA +  +K + ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+
Sbjct: 122 LFRMYSRWASRHHWKVDVIDRLDGEVAGIKHITLKLTGEYAYGYAKAESGVHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           DSN++RHTSF+S+ V+P VDD I+IEI  +D RIDT+R+SGAGGQHVN T+SAVRITH+P
Sbjct: 182 DSNAKRHTSFASVDVFPEVDDQIQIEILPNDLRIDTFRSSGAGGQHVNVTESAVRITHLP 241

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+VV CQ ERSQ +N+     +LRA+LY+ ELQ+R E   +    K EI WG QIR+YV
Sbjct: 242 TGIVVSCQNERSQLQNRESCMKVLRARLYQRELQERLERRLLERKDKKEIAWGSQIRNYV 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            QPY +VKD+RT  E  +   ++DG+ LD+F+K  LA
Sbjct: 302 FQPYTLVKDVRTGYEVGNIQAMMDGELLDEFIKVYLA 338


>gi|300932665|ref|ZP_07147921.1| peptide chain release factor 2 [Corynebacterium resistens DSM
           45100]
          Length = 378

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 10/353 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D +        L  +  DP LW +   A+ +  E   +   +  +K ++ RL
Sbjct: 16  LTTIEKVLDLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKSLRQRL 75

Query: 67  CDNLILLELALE-----EDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLE 120
            D  ++ ++A E      D      E +D  +  ++ E+E  +  ++LSGE D  +A + 
Sbjct: 76  EDLPVMYDMAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQREAVVN 135

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG 
Sbjct: 136 IRSGAGGVDAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGEYMYGT 195

Query: 181 LKGEQGVHRLVRISPYDSNS-RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           L  EQG HRLVR+SP+ S   +R TSF+ + V PVV+ +  I+I +++ R+D YR+SG G
Sbjct: 196 LSVEQGAHRLVRLSPFGSGGDKRQTSFAEVEVLPVVEQTDHIDIPDAEVRVDVYRSSGPG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANI 298
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q +R E+  +
Sbjct: 256 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL 315

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G        WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +
Sbjct: 316 GAGGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGI 366


>gi|291517989|emb|CBK73210.1| bacterial peptide chain release factor 2 (bRF-2) [Butyrivibrio
           fibrisolvens 16/4]
          Length = 338

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 148/321 (46%), Positives = 211/321 (65%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P  W +   +   M+E + + + ++ I +++D   +    +EL  EE+D  I+   + 
Sbjct: 2   EAPDFWTDAQVSTAKMKELKSMKDDVAVIDKLEDLYKEIEDYIELGNEEEDQEIVDTVAL 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            ++  + ++E  + ++LLSGE DS+ A + +H+GAGG E+ DW  ML RMY+RWA    F
Sbjct: 62  LIEEFENDLESLRMKTLLSGEYDSDSAIVTLHSGAGGVEACDWVQMLYRMYSRWASDMGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             + L+  +G+EAGIKS T  + G NAYG+LK E+G+HRLVRISP+++  +R TSF+S  
Sbjct: 122 AVDELDYQEGDEAGIKSVTFQVNGDNAYGYLKSEKGIHRLVRISPFNAQGKRQTSFASCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ +++EI + D RIDTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ 
Sbjct: 182 VMPDIEEDVDVEIRDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+ KL  L+ ++    A+      +EIGWG QIRSYVLQPY MVKDLRT  
Sbjct: 242 QNKDKAMQMLKTKLLLLKQEENAAKASGIRGEVSEIGWGNQIRSYVLQPYTMVKDLRTGE 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E  +   VLDG L  FM A L
Sbjct: 302 ESGNADAVLDGKLTPFMNAYL 322


>gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
 gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
          Length = 368

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 163/355 (45%), Positives = 223/355 (62%), Gaps = 9/355 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + +  GG+FD D     +  L  +      W +   A+ ++ +       ++ +   
Sbjct: 1   MKSEPDTYGGIFDVDKKKTEIGELEAQMSAEGFWNDQKAAQAVIAQANLAKGVVNGMTAF 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAY 118
             +L D   + EL L E+    L + ++ LQ     +K E++  + +  L+   D  +A 
Sbjct: 61  MAKLDDARAMEEL-LNEEGVDELSDEAEELQAAAVALKEELDELEIQCYLNKPHDRCNAL 119

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L V+AGAGGTES DWA +L RMY+RWAE+R FK E +++  GEEAG+   TL I G NA+
Sbjct: 120 LSVNAGAGGTESCDWAELLYRMYSRWAERRGFKVEVVDMLPGEEAGLDKVTLRIVGENAF 179

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+   E+GVHRLVRISP+DS  RRHTSF ++ V   ++D IEIEI   D R DTYR+SG 
Sbjct: 180 GYANAERGVHRLVRISPFDSQKRRHTSFCAVDVVAEIEDDIEIEIEAKDLREDTYRSSGK 239

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIAN 297
           GGQHVN TDSAVR+THIPTG+V  CQ +RSQHKN++ A  ML+A+LYE +E +KR  +  
Sbjct: 240 GGQHVNKTDSAVRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKARLYERMEDEKRSAMEK 299

Query: 298 I-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + GE  K EIGWG QIRSYV QPYQMVKDLRT +E  +   V+DGD+D F+   L
Sbjct: 300 MYGE--KGEIGWGNQIRSYVFQPYQMVKDLRTGVETGNIQAVMDGDIDRFVSGWL 352


>gi|239917286|ref|YP_002956844.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
 gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
          Length = 373

 Score =  290 bits (742), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/350 (43%), Positives = 220/350 (62%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++ELA EED+ S+L + +  L  I+  +E  +  +LLSGE D  DA + + 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A  L+RMY RWAE+R + T+ ++    EEAG+KS T  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L L+K EE A   E +
Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLLRKAEEDAKKKEMA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +
Sbjct: 311 GDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGI 360


>gi|332662344|ref|YP_004445132.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332331158|gb|AEE48259.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  290 bits (742), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/349 (44%), Positives = 222/349 (63%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  LG   D +N + ++      + DP  W +   A+ +++E +   N ++  K  
Sbjct: 9   LRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWNDPKRAETILKELKSHKNWVAQYKAA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D  +LLE   E +     +E           +E  +F + L+   D  +  LE++
Sbjct: 69  EAEVDDAEVLLEFNKEGEATE--EEVDQKYAEALAVIEGLEFHTTLNQPEDELNVVLEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY  WA++R FK   L   DG+ AG+KSA++ I+G   +G LK
Sbjct: 127 AGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELNRQDGDVAGLKSASIEIEGEYVFGLLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY+S  +R TSFSS++V+P+VDDSIEIEI+ +D   DT+RASGAGGQH
Sbjct: 187 GENGVHRLVRVSPYNSQGKRMTSFSSVFVHPMVDDSIEIEINPADLEWDTFRASGAGGQH 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR+ H+P+G+V +CQQERSQH N+ +A  ML+++LYE EL+K++      ES 
Sbjct: 247 VNKTESAVRVRHLPSGIVAECQQERSQHMNRDKAMQMLKSRLYERELEKQKAEKETIESG 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +  WG QIRSYVL   + VKD RT  + +    VL+GD+D+F+KA L
Sbjct: 307 KMKNEWGSQIRSYVLDD-RRVKDHRTGYQTSQTDAVLNGDIDEFLKAFL 354


>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 376

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 3/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P LW +   A+ +  +  H    +  +++   R+ D  +L+ +  +E D   L E +  +
Sbjct: 42  PDLWDDPDVAQAITSKLSHKQGTLEKLQKFDQRIEDVELLVSMGEDEGDEDALNEAAAEV 101

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           +++K E+   +  +LLSGE D   A + V AGAGG ++ DWA ML RMY RWAE R +K 
Sbjct: 102 EKLKSELAALEISTLLSGEFDERSAVITVRAGAGGDDATDWAQMLTRMYIRWAENRGYKV 161

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+    E AG+KSAT+ +  P AYG L  E G HRLVRISP+D+  RR TSF+++ V 
Sbjct: 162 EELDTSYAEGAGVKSATVQVNAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVV 221

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P+++ +  I+I E+D RID +R+SG GGQ VNTTDSAVRITH+PTGVVV  Q E+SQ +N
Sbjct: 222 PLIEQTDHIDIDENDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGVVVSMQNEKSQIQN 281

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +A A  +L+++L  L+L++ EE A   + +   +  WG Q+RSYV  PYQMVKDLRT  E
Sbjct: 282 RAAAMRVLQSRL--LQLKREEEEAQKKDLAGDIKASWGDQMRSYVTHPYQMVKDLRTGYE 339

Query: 332 KTSPSDVLDGDLDDFMKATL 351
             +P  V DGD+DDF++A +
Sbjct: 340 VNNPQAVFDGDIDDFLEAGI 359


>gi|289642137|ref|ZP_06474289.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
 gi|289508100|gb|EFD29047.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
          Length = 366

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 153/349 (43%), Positives = 216/349 (61%), Gaps = 4/349 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   +R + L  +  DP LW +   A+ + R    +   IS ++ +
Sbjct: 12  LDATLAGIEAVLDLDTLRRRAADLEREAADPQLWSDQDRAQAVTRRLSSVRGDISRVEAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D +  L+L        +L E +++L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 72  RRRLDDVIAALDLGD----DDLLAEAANDLPTLARDISALEVRTLLSGEYDERDAIVQLS 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  +  E  +  + EEAG+KSAT  IK P AYG L+
Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYAAEVFDTSEAEEAGLKSATFQIKAPYAYGTLR 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  +EI + + RID +R+SG GGQ 
Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVEQSDHVEIDDKELRIDIFRSSGPGGQG 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 248 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRLTGG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             ++ +G QIR+YVL PYQMVKDLRT +E +  + VLDGD+D+F+ A +
Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSGTAAVLDGDIDEFIDAEI 356


>gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2]
 gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2]
          Length = 349

 Score =  290 bits (741), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 164/349 (46%), Positives = 216/349 (61%), Gaps = 22/349 (6%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD      ++  L + T     W +   A+ L+R+     N I  I E  ++L   LI L
Sbjct: 8   FDLAEKKHKIQELTSMTLQDDFWNDPQHAQTLIRQL----NGIKDIVESYEKLNSALIGL 63

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAG 124
           E     +   +L+E  D+      E EY + E          LLS E D + A LE+H G
Sbjct: 64  E-----ETHDLLKEDYDDEIFELFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPG 118

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTES DWA+ML RMY+RWAEK+ FK   L+   G+EAGIKS T L++G  AYG+LK E
Sbjct: 119 AGGTESCDWADMLYRMYSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHRLVRISP+DS  RRHTSF+S+ V P  ++ IEIEI   D  ++T RASGAGGQH+N
Sbjct: 179 KGVHRLVRISPFDSGGRRHTSFASLDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHIN 238

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESS 302
            TDSAVR+ H PTG+V  CQ  RSQH+N+ +A  +L+++LY+  ++++E  +A I GE  
Sbjct: 239 KTDSAVRMVHKPTGLVAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQK 298

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             E  WG QIRSYV  PY MVKD RT+ E +    V+DGDLD F+ A L
Sbjct: 299 ANE--WGSQIRSYVFHPYSMVKDHRTSCETSDVQGVMDGDLDAFIFAYL 345


>gi|312891182|ref|ZP_07750704.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
 gi|311296349|gb|EFQ73496.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
          Length = 286

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 127/249 (51%), Positives = 192/249 (77%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F+++LS E D   A L++ AGAGGTES DWA+ML+RMY  WA+K  +K   ++  +G+ 
Sbjct: 30  EFKNMLSAEEDQLSAVLQITAGAGGTESCDWASMLMRMYMMWAQKNGYKITEIDYQEGDV 89

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AG+K+ TL   G  +YG+LKGE GVHRLVR+SP+D+N++RHTSF+S++VYP+VDD+I I+
Sbjct: 90  AGVKTVTLQFDGDFSYGYLKGENGVHRLVRVSPFDANAKRHTSFASVYVYPLVDDTINID 149

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++ +D   +T+R+ GAGGQ+VN  ++AVR+ H P+G++++ Q+ RSQ +NK  A  +L++
Sbjct: 150 VNPADIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKS 209

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +LYE E++KR EI++  E +K +I WG QIR+YVL PY++VKDLRT+ E ++   VLDG+
Sbjct: 210 QLYEAEMRKRMEISDAIEGNKKKIEWGSQIRNYVLHPYKLVKDLRTDYETSNAQAVLDGE 269

Query: 343 LDDFMKATL 351
           LD+F+KA L
Sbjct: 270 LDEFLKAYL 278


>gi|15827278|ref|NP_301541.1| peptide chain release factor 2 [Mycobacterium leprae TN]
 gi|221229756|ref|YP_002503172.1| peptide chain release factor 2 [Mycobacterium leprae Br4923]
 gi|6093957|sp|O32885|RF2_MYCLE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790917|sp|B8ZUV0|RF2_MYCLB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2326693|emb|CAB11005.1| peptide chain release factor 2 [Mycobacterium leprae]
 gi|13092827|emb|CAC30176.1| putative peptide chain release factor 2 [Mycobacterium leprae]
 gi|219932863|emb|CAR70761.1| putative peptide chain release factor 2 [Mycobacterium leprae
           Br4923]
          Length = 374

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 163/359 (45%), Positives = 224/359 (62%), Gaps = 15/359 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW + + A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVEGLRTRIEKLEHEASDPKLWDDQVRAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEE------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L ELA EE             E    L+ +++++E  +  +LLSGE D  +
Sbjct: 72  RRRLDDLPVLYELAAEERAAAAASGMEAFAEADAELKALRVDIEATEVRTLLSGEYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A + + +GAGG ++ DWA ML+RMY RWAE+ K+  E L+    EEAG+KSAT  +  P 
Sbjct: 132 ALITIRSGAGGVDAADWAEMLMRMYIRWAEQHKYGVEVLDTSYAEEAGVKSATFAVHAPF 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AYG L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+S
Sbjct: 192 AYGTLASEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVEITDHIDIPEGDVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEI 295
           G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E + L++R E+
Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGLVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEL 311

Query: 296 ANI---GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +   G SS     WG QIRSYVL PYQMVKDLR   E  +P+ VLDGD+D F++A +
Sbjct: 312 DALKGRGGSS-----WGNQIRSYVLHPYQMVKDLRNEYEVGNPTAVLDGDIDGFLEAGI 365


>gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora]
 gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora]
          Length = 354

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 213/340 (62%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      R   L      P  W    +A+  MR+   +   +  +++ Q  + D    
Sbjct: 5   VFDVPALKARQQDLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAKAT 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL   E D S+L E ++ +QR+K  ++  + E LL+G  D   A + ++AGAGGT++QD
Sbjct: 65  LELYNIEPDESMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRW+E    K    EI +GEEAGIKS T  I G  AYG+L+ E+G HRLVR
Sbjct: 125 WARMLLRMYTRWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +++ I++ I + D  + T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLNEDIDMFIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG Q
Sbjct: 245 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADI-RGEIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRTN E T    V+DGDLD F++A L
Sbjct: 304 IRNYVFHPYQMVKDLRTNKETTDVQGVMDGDLDLFIQALL 343


>gi|162449904|ref|YP_001612271.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
 gi|161160486|emb|CAN91791.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
          Length = 350

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 214/329 (65%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  L   T     W +  +A+ ++R+R  +++ +   + +   + D    LEL   E D 
Sbjct: 2   LQDLTQTTLSSGFWNDQEKAQAVLRKRAQVESKLEVAQRLGREIEDLAEYLELGAAEGDE 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            ++ +       I   +   + + +LSG AD  +A + +H GAGGT+++DWA+MLLRMY 
Sbjct: 62  GVIADADAQADAIAGRLRKVELDRMLSGPADRGNAIVSIHPGAGGTDAKDWASMLLRMYL 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+ E+R +KTE ++  DG+EAGI + TL + G  AYG+L+ E GVHRLVR+SP++++  R
Sbjct: 122 RFCERRGYKTEIIDYQDGDEAGIDAVTLTVSGDAAYGYLRSEAGVHRLVRMSPFNADHTR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            T+F+++ V P  DD I I+++E D  I T RA G GGQ+VN  ++AVR+ HIPTG+ + 
Sbjct: 182 QTAFAAVEVTPDSDDEINIQVNEKDIEITTMRAGGKGGQNVNKVETAVRLRHIPTGLNIV 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           C+ ERSQH+N+A A  +L+AKLYE+ELQKRE       ++K+ I +G QIR+YVL PY++
Sbjct: 242 CRAERSQHQNRAMAMKVLKAKLYEMELQKREAEVQAYNAAKSSINFGSQIRNYVLAPYRL 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD+RT+ E T    VLDGDL+ F++A L
Sbjct: 302 VKDVRTSTEATDVDAVLDGDLEGFIEAYL 330


>gi|269925864|ref|YP_003322487.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 372

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 160/352 (45%), Positives = 219/352 (62%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++      D +N    +  L  +     LW +  EA+ +M+    L + +    +I
Sbjct: 12  LRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDLKDQLEVWSKI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LL+LA EED  S   E +  ++ ++ ++ + + E LLSG  D  DA + +H
Sbjct: 72  ERRLEDAEVLLDLAYEEDSASDFHEAASQIRALENQLNHLELELLLSGSYDQEDAIIAIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A  GG ++QDWA+ML+RMY RWA++R ++ E +   +GEEAG KSAT+ IKG  AYG+ K
Sbjct: 132 AREGGIDAQDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATIEIKGKYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVR+SP+D   RRHTSF+ + V P V+++ E++I E D +IDTYRAS AGGQH
Sbjct: 192 AEAGQHRLVRLSPFDQAHRRHTSFALVEVLPDVEETPEVQIREEDLKIDTYRASSAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM--LRAKLYELELQKREEIANIGE 300
           VN T SAVRITHIPTG+VV CQ ERSQ +NK  A  +   R    EL  Q  E+    GE
Sbjct: 252 VNKTSSAVRITHIPTGIVVTCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKGE 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              T  GWG QIRSYVL PY MVKD RT  E +    VLDG++D F++A L+
Sbjct: 312 HIAT--GWGSQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEAYLS 361


>gi|312149296|gb|ADQ29367.1| peptide chain release factor 2 [Borrelia burgdorferi N40]
          Length = 359

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/344 (45%), Positives = 225/344 (65%), Gaps = 14/344 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ D   L
Sbjct: 19  LFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDL 78

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAGG 127
            E+A  E D S L+   + L+        KQ++ LL+      E D+N+A+L +H+GAGG
Sbjct: 79  CEIAENEKDTSGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 131 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 190 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 249

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 250 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 309

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 310 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 353


>gi|296394151|ref|YP_003659035.1| peptide subunit release factor 2 [Segniliparus rotundus DSM 44985]
 gi|296181298|gb|ADG98204.1| peptide chain release factor 2 [Segniliparus rotundus DSM 44985]
          Length = 372

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 152/354 (42%), Positives = 216/354 (61%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +    D D     ++ L T+  DP LW++    + +          +  +  +
Sbjct: 12  LATTLCTVESALDLDKLRAEIADLETQAADPSLWEDQERGQEVTSGLARKQATLRAVTGL 71

Query: 63  QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA +E+       L+E     + ++ E+E  +  +LL+GE D  +A +
Sbjct: 72  RSRLDDLHVLYELAEDEEGAQGQEALEEADTERKTLRAEIESLEVRTLLNGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K   E  +I   EEAGIKSAT  +K   AYG
Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEVYDISYAEEAGIKSATFAVKSAYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV  +  I++ E++ R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIDVPEAEIRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI- 298
           GQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK  A  +L+AKL E    + +E  N  
Sbjct: 252 GQSVNTTDSAVRITHLPTGIVVTCQNEKSQLQNKLSAMRVLQAKLLERRRHEEQEQLNAL 311

Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G+   +   WG Q+RSYVL PYQMVKDLRT  E+++P  VLDG +D F+++ +
Sbjct: 312 KGDGGTS---WGTQMRSYVLAPYQMVKDLRTEYEESNPGAVLDGAIDGFLESGI 362


>gi|311747486|ref|ZP_07721271.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
 gi|126574844|gb|EAZ79215.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
          Length = 315

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 141/267 (52%), Positives = 192/267 (71%), Gaps = 2/267 (0%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E S   ++ K  VE  + + +LS E D  +A LE++ GAGGTES DWA++L+RMY  W 
Sbjct: 39  EEMSREFEKAKSTVEELELKKMLSSEEDQLNAVLEINPGAGGTESNDWASILMRMYIMWG 98

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK  +K   +++  G+ AGIKS TL  +GP AYG+LK E GVHRLVRISP+DS  RRHTS
Sbjct: 99  EKNGYKVREVDVQQGDVAGIKSCTLEFEGPLAYGFLKSETGVHRLVRISPFDSGGRRHTS 158

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++ YP VDDSIEI+I+ +D  + T R+ GAGGQ+VN  ++ V++TH PTG+VV CQ 
Sbjct: 159 FASVYAYPEVDDSIEIDINPADIELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQI 218

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ  N+ +A  ML+++L++LE++KR  EIA I ESSK  + +G QIR+YVL PY++VK
Sbjct: 219 ERSQLANREKAMQMLKSRLFQLEVEKRNAEIAKI-ESSKLRVDFGSQIRNYVLHPYKLVK 277

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D RT  E +    VLDG L++FMKA L
Sbjct: 278 DARTGHETSDTQHVLDGGLNEFMKAYL 304


>gi|88803344|ref|ZP_01118870.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
 gi|88780910|gb|EAR12089.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
          Length = 365

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 218/325 (67%), Gaps = 6/325 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--RLCDNLILLELALEEDDCSILQ 86
           KT +P  W +  EA++ ++E   L     ++ + Q    L D++I+L    +E D +   
Sbjct: 36  KTTNPGFWDHPKEAEVAIKE---LRFKKKWVTDYQHAITLNDDVIVLYEFYKEGDVA-ET 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  +  +++   +E  +F ++LS E DS  A +++ AGAGGTES DW  ML RMY+ WAE
Sbjct: 92  EMDEQFEKVSSFLEDIEFRNMLSEEGDSLAATIQITAGAGGTESCDWVEMLSRMYSMWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           K+ FK + L    G+ AGIK+ T+ I+G  A+GWLKGE GVHRLVRISP+DSN +RHT+F
Sbjct: 152 KQGFKLKTLNYQAGDVAGIKTITIEIEGDFAFGWLKGENGVHRLVRISPFDSNGKRHTTF 211

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            S++V+PV DDSIEI ++ +D  I T R+SGAGGQ+VN  ++ V++TH PTG+ +QC   
Sbjct: 212 GSVYVFPVADDSIEIAVNPADIEIVTARSSGAGGQNVNKVETKVQLTHKPTGIQIQCSNS 271

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH N+A A  ML+++LYE+EL+K++      E+ K +  WG QIR+YV+ PY++VKD+
Sbjct: 272 RSQHDNRATAMKMLKSQLYEIELKKQQATRADIEAGKLKNEWGSQIRNYVMHPYKLVKDV 331

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RT  E  +   V+DG+++ F+K+ L
Sbjct: 332 RTAYETGNVDAVMDGNINPFLKSYL 356


>gi|149277162|ref|ZP_01883304.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
 gi|149232039|gb|EDM37416.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
          Length = 324

 Score =  289 bits (739), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 133/253 (52%), Positives = 188/253 (74%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  + +++LS + D   A +++ AGAGGTES DWA ML+RMY  W EK  +K    +  
Sbjct: 69  IEALELKNMLSSKEDQLHAVMQITAGAGGTESCDWAAMLMRMYIMWGEKNGYKVTEQDYQ 128

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE AG+KS TL   G  +YG+LKGE GVHRLVRISP+DSN+RRHTSF+S++VYP+VDD+
Sbjct: 129 EGEVAGVKSVTLQFAGDFSYGYLKGENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDT 188

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEIE+ +S+   +T+R+ GAGGQ+VN  ++AVR+ H P+G+V++ Q+ RSQ +NK  A  
Sbjct: 189 IEIEVKDSEIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIVIKNQESRSQLQNKENAMR 248

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +L+++LYE E++KR E     E SK +I WG QIR+YVL PY++VKDLRTN E ++   V
Sbjct: 249 LLKSQLYEAEMRKRMEATAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRTNYETSNAQGV 308

Query: 339 LDGDLDDFMKATL 351
           LDG+L++F+KA L
Sbjct: 309 LDGELNEFLKAYL 321


>gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM
           7109]
 gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM
           7109]
          Length = 377

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 161/359 (44%), Positives = 218/359 (60%), Gaps = 15/359 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  +  DP LW +   A+ +  E   +   +  I+E+
Sbjct: 12  LEGTLTTIERVLDLDELDWRARELEDQAADPSLWDDPDHAQQVTSELSRVQAKLKKIREL 71

Query: 63  QDRLCDNLILLELALEE---------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           + RL D  +L  +A EE         D  ++ +E    L   +  +E  +  ++LSGE D
Sbjct: 72  RQRLEDLPVLYNMAEEEAAEDPAASEDAVAMAEEERSAL---RAAIESLEITTMLSGEYD 128

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             +A + + +GAGG ++ DWA MLLRMYTRWAE+   K +  +I   EEAGIKSAT +I 
Sbjct: 129 QREALVNIRSGAGGVDAADWAEMLLRMYTRWAEQHGHKVDIYDISYAEEAGIKSATFVIH 188

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G   YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ ++D R+D Y
Sbjct: 189 GDYMYGTLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVY 248

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL  LE +++E
Sbjct: 249 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQE 306

Query: 294 EIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E A +    +     WG Q+RSYVL PYQMVKDLRT  E   P  VLDGDLD  ++A +
Sbjct: 307 EKAEMDALGAGGNASWGNQMRSYVLHPYQMVKDLRTEYEVGDPQKVLDGDLDGLIEAGI 365


>gi|289551384|ref|YP_003472288.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180915|gb|ADC88160.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 334

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 157/322 (48%), Positives = 217/322 (67%), Gaps = 3/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W +  +A+ ++ +   L        ++ + + D     EL  EE D  +  E   +
Sbjct: 4   EPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAELEMD 63

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +     +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+  FK
Sbjct: 64  VLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNGFK 123

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S  V
Sbjct: 124 VETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASCDV 183

Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P   ++ IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERSQ 
Sbjct: 184 IPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A  ML++KLY+L+L+++ +E+A I    + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAQEMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E      V+DGD+  F++A L
Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324


>gi|282865194|ref|ZP_06274247.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
 gi|282560117|gb|EFB65666.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
          Length = 368

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 159/355 (44%), Positives = 222/355 (62%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D   L E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFELAEDEGDADALAEAEAELVSVRKALDEMEVRTLLSGEYDAREAVVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFTVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +  + 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEIGNPEAVFNGEIDGFIEAGIRWRK 364


>gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
 gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
          Length = 370

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 157/352 (44%), Positives = 224/352 (63%), Gaps = 6/352 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   + ++ L  +   P LW +V  A+ L  +  +L   +  ++E
Sbjct: 11  ELDTTLRSIEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L E+A+EE D +   E    L  ++  ++  +  +LLSGE DS +A + +
Sbjct: 71  LRSRLDDVGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            + AGG ++ D+A ML+RMY RWAE+ ++  E  ++   EEAGIKSAT  +K P AYG L
Sbjct: 131 RSEAGGVDAADFAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  ++I E++ RID +R+SG GGQ
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQKREEIANIG 299
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+A+L     E Q+ E  A  G
Sbjct: 251 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARLLARRQEEQRAEMDALRG 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E S     WG Q+RSYVL PYQMVKDLRT  E  + S VLDGD+D F++A +
Sbjct: 311 EGSS----WGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGI 358


>gi|328794147|ref|XP_003252002.1| PREDICTED: peptide chain release factor 2-like, partial [Apis
           mellifera]
          Length = 276

 Score =  288 bits (738), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 140/265 (52%), Positives = 183/265 (69%)

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   +LQ+++ E    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+A+
Sbjct: 2   EVETDLQKLQSEFHNYELDLLLSGKYDSHNALIEIHPGAGGTEAMDWGQMLLRMYQRYAD 61

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              FK E      GEEAG+KS +  + G NAYG +K E GVHRLVRISP+DS  RRHTSF
Sbjct: 62  ICGFKFEINNYEPGEEAGLKSVSAKVCGKNAYGLMKSENGVHRLVRISPFDSAKRRHTSF 121

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DDSI+++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG V   Q +
Sbjct: 122 ASVEVIPEIDDSIKVDINPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGFVTTSQAQ 181

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDL
Sbjct: 182 RSQLQNRETAMNELRAKLFHLEEEKKRQHKQALKGDQKEIGWGSQIRSYVFHPYNLVKDL 241

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RT  E +  S V+DG L  F+ + L
Sbjct: 242 RTGYETSDTSGVMDGKLQPFVYSYL 266


>gi|118617904|ref|YP_906236.1| peptide chain release factor 2 [Mycobacterium ulcerans Agy99]
 gi|166225111|sp|A0PQZ6|RF2_MYCUA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118570014|gb|ABL04765.1| peptide chain release factor 2 PrfB [Mycobacterium ulcerans Agy99]
          Length = 371

 Score =  288 bits (738), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 162/354 (45%), Positives = 225/354 (63%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +   E     + ++ ++E  +  +LLSGE D  +A +
Sbjct: 72  RRRLEDLPVLYELAAEEEGAAAGEALTEADAEFKALRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRIEERAEL- 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGI 362


>gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
 gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
          Length = 362

 Score =  288 bits (737), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 156/329 (47%), Positives = 211/329 (64%), Gaps = 8/329 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSI 84
           L + +  P  WQ+   A+  M++           + ++ R+ D   LLEL AL  +D S+
Sbjct: 31  LESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRGLEQRVND---LLELFALTHEDPSL 87

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             E    +  +  E++  +     SG+ DS +A L VHAGAGG ESQDWA MLLRM+ RW
Sbjct: 88  GNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQDWAGMLLRMFMRW 147

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEK+ F  E L+   GEEAGIKSATL I+G  AYG+LK E GVHRL+R+SP+D++  RHT
Sbjct: 148 AEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFDADHARHT 207

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+ + V P  +DS++I+I   D +ID +R+SG GGQ+V    +AVR+THIP+G+VV  Q
Sbjct: 208 SFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQ 267

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVLQPYQM 322
            ERSQH+N+  A  +L +KL  +E+ KR EE A I GE    E  WG QIRSYVL PY+M
Sbjct: 268 TERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAE--WGNQIRSYVLHPYKM 325

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT+ E  +   VL+G+LD F+ A L
Sbjct: 326 VKDHRTDYEVGNAEAVLEGELDGFINAYL 354


>gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
 gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
          Length = 294

 Score =  288 bits (737), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 151/285 (52%), Positives = 201/285 (70%), Gaps = 2/285 (0%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +LEL   E D ++L E   NL ++  E++  + E LLSG  D+  A L ++AGAGG
Sbjct: 3   DTKAILELLELETDDALLAEAQTNLTQLNKELDRWELEQLLSGTYDAKGAVLTINAGAGG 62

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           T++QDWA++LLRMYTRWAE   +K    E+  G+EAGIKSATL I G  AYG+LK E+G 
Sbjct: 63  TDAQDWADLLLRMYTRWAENHGYKVHLAELSPGDEAGIKSATLEIDGLRAYGYLKAEKGT 122

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+++N +R TSF+ + V P VD+++E+EI E D  I T RA G GGQ+VN  +
Sbjct: 123 HRLVRISPFNANGKRQTSFAGVEVMPAVDNTVELEIPEKDLEITTSRAGGKGGQNVNKVE 182

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEI 306
           +AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  + E Q+ +EIA I      E 
Sbjct: 183 TAVRIVHIPTGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEI-RGDMVEA 241

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIR+YV  PYQMVKDLRT++E T+ +DVLDG+LD F++A L
Sbjct: 242 AWGNQIRNYVFHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYL 286


>gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
 gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
          Length = 371

 Score =  288 bits (737), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 152/350 (43%), Positives = 220/350 (62%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D D     ++ L+ +   P+LW +   A+++  +  H  + +  +  +
Sbjct: 13  LRSTFSAIEDVSDVDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L+ELA  EDD   L E    L  I+  +   +  +LLSGE DS  A + + 
Sbjct: 73  RTRIDDLEVLVELAELEDDADTLDEAEKELVSIQKSLADLEIVTLLSGEFDSRGAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+R +K   ++    EEAG+KSAT  I  P A+G L 
Sbjct: 133 SGAGGVDAADFAEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDTIEIPESEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVR+THIPTGVVV  Q E+SQ +N+A A  +L+++L  L L+K +E A   E +
Sbjct: 253 VNTTDSAVRMTHIPTGVVVSMQNEKSQIQNRAAALRVLQSRL--LLLKKEQEDAQKKEFA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG Q+RSYVL PYQMVKDLRT  E  +   VLDG++DDF+ A +
Sbjct: 311 GDVKATWGDQMRSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGI 360


>gi|160947120|ref|ZP_02094287.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
 gi|158446254|gb|EDP23249.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
          Length = 349

 Score =  288 bits (737), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 153/324 (47%), Positives = 213/324 (65%), Gaps = 4/324 (1%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   AK ++   ++L   I     +  ++ D++  LE+  +E+     +E   N+  
Sbjct: 25  FWNDSKSAKSILDNMKNLKFKIETFTSLSRKIEDSIEFLEILSDEEFMEYEKEALKNIYN 84

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+ E    +  +L+ GE DSN+A LE+HAGAGGT++QDW  ML R+YTRW   + F    
Sbjct: 85  IEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQDWTEMLQRLYTRWINSKGFSFSI 144

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+ +   E GIKS TL + G NAYG+LKGE+GVHRLVRISPYDS+++RHTSF+S+ V+P 
Sbjct: 145 LDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVHRLVRISPYDSSNKRHTSFASVDVFPE 204

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +++  +IEI+  D RIDTYR+ GAGGQHVN TDSAVRITHIPTGV V CQ ERSQ  N+ 
Sbjct: 205 IEEITDIEINPKDLRIDTYRSGGAGGQHVNKTDSAVRITHIPTGVTVSCQSERSQMFNRD 264

Query: 275 QAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A   L AKL  ++ ++ RE+I +I +   ++I WG QIRSYV QPY +VKD RT  E  
Sbjct: 265 TAMRQLIAKLLIIKQEENREKIEDI-QGKYSQIAWGSQIRSYVFQPYTLVKDHRTGYETG 323

Query: 334 SPSDVLDGDLDDFMKATLA--IKK 355
           +   V++G++D+F+   L   IKK
Sbjct: 324 NVESVMNGNIDEFINQYLCELIKK 347


>gi|309777858|ref|ZP_07672804.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914419|gb|EFP60213.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 327

 Score =  288 bits (737), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 161/328 (49%), Positives = 209/328 (63%), Gaps = 22/328 (6%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ L+R+     N I  I E  ++L   L  LE     +   +L+E  D+   
Sbjct: 7   FWSDPQHAQTLIRQL----NGIKDIVESYEKLNSALEGLE-----ETHDLLKEDYDDEIF 57

Query: 95  IKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
              E EY + E          LLS E D + A LE+H GAGGTES DWA+ML RMY+RWA
Sbjct: 58  ELFEAEYMEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWA 117

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK+ FK   L+   GEEAGIKS T L++G  AYG+LK E+GVHRLVRISP+DS  RRHTS
Sbjct: 118 EKKGFKVSVLDYLPGEEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTS 177

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P  +D IEIEI   D  ++T RASGAGGQH+N TDSAVR+ H PTG+V  CQ 
Sbjct: 178 FASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQN 237

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMV 323
            RSQH+N+ +A  +L+++LY+  ++++E ++A I GE    E  WG QIRSYV  PY MV
Sbjct: 238 GRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEQKANE--WGSQIRSYVFHPYSMV 295

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KD RT+ E +    V+DGDLD F+ A L
Sbjct: 296 KDHRTSCETSDVQGVMDGDLDAFIFAYL 323


>gi|7388055|sp|P74476|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 372

 Score =  288 bits (737), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 146/321 (45%), Positives = 215/321 (66%), Gaps = 3/321 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+ +++      + +      Q +  D+  ++EL   EDD ++L E    L
Sbjct: 45  PDFWDDTDQAQQILQTLNETKSQLEQWGIWQQQWQDSQAIVELLELEDDQALLTEAETTL 104

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++ E++  + + LLSG  D+  A L ++AGAGGT++QDWA MLLRMYTRW+EK+ +K 
Sbjct: 105 EQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKV 164

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              EI +G+EAG+KS TL I+G  AYG+LK E+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 165 HLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVRISPFNANGKRQTSFAGVEVM 224

Query: 213 PVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P++ +++I ++I + D  I T RA G GGQ+VN  ++AVRI H+PTG+ V+C QERSQ +
Sbjct: 225 PLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTQERSQLQ 284

Query: 272 NKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK +A  +L+AKL   LE Q+ + IA I      E  WG QIR+YV  PYQ+VKDLRTN+
Sbjct: 285 NKEKALAILKAKLLIVLEEQRAQAIAEI-RGDMVEAAWGTQIRNYVFHPYQLVKDLRTNV 343

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T    V+DG+L DF++A L
Sbjct: 344 ETTDVGGVMDGELSDFIEAYL 364


>gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 288

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 141/274 (51%), Positives = 191/274 (69%), Gaps = 2/274 (0%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D ++LQE    + ++  E++  + + LLSG  D+  A L ++AGAGGT++QDWA ML+
Sbjct: 4   ETDEALLQEAESTVTKLNRELDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLM 63

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++
Sbjct: 64  RMYTRWAEDHGYKVSLAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNA 123

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + + P +D S+++EI E D  I T RA G GGQ+VN  ++AVRI H+PTG
Sbjct: 124 NGKRQTSFAGVEIMPQLDHSVQLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTG 183

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C +ERSQ +NK +A   L+AKL  +   QK +E+A I      E  WG QIR+YV 
Sbjct: 184 IAVRCTEERSQLQNKDKALARLKAKLLVIAREQKAQEVAEI-RGDMVEASWGNQIRNYVF 242

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQMVKDLRTN+E T+ SDV+DGDLD F++A L
Sbjct: 243 HPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYL 276


>gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304]
 gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304]
          Length = 370

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 148/335 (44%), Positives = 210/335 (62%), Gaps = 3/335 (0%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  +++  L  +   P LW +   A+++        N    + +++ RL D   L EL  
Sbjct: 28  NLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDDLERRLDDIATLYELGS 87

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EEDD     E    L  ++ ++   + ++LL GE D+  A + + +GAGG ++ DWA ML
Sbjct: 88  EEDDQDSKAEAEKELTAVRSDLSDLEIQTLLDGEYDNRAAVVTIRSGAGGVDAADWAQML 147

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D
Sbjct: 148 MRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKLSVEGGTHRLVRISPFD 207

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +NSRR TSF+++ V P+V+ +  I+I +SD R+DTY + G GGQ VNTT SAVRITHIPT
Sbjct: 208 NNSRRQTSFAAVEVIPLVEPTDHIDIPDSDIRVDTYMSHGPGGQGVNTTYSAVRITHIPT 267

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYV 316
           G+VV  Q ERSQ +N+A A ++L+++L  L +++ EE A   E +   +  WG Q+RSYV
Sbjct: 268 GIVVTMQDERSQIQNRAAAMSVLQSRL--LVMKQEEEAAKKKELAGDVKASWGDQMRSYV 325

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           L PYQMVKDLRT  E + P  V DGD+D F+ A +
Sbjct: 326 LHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGI 360


>gi|325105358|ref|YP_004275012.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
 gi|324974206|gb|ADY53190.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
          Length = 362

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 132/249 (53%), Positives = 190/249 (76%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F+++LS E D  +A L++ AGAGGTES DWA+ML+RMY  W EK   K    +  +G+ 
Sbjct: 107 EFKNMLSAEEDQLNAVLQITAGAGGTESCDWASMLMRMYIMWGEKHGCKVIEQDSQEGDV 166

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIKS TL  +G  AYG LKGE GVHRLVRISP+DSN++RHTSF+S++VYP++DD+I+I+
Sbjct: 167 AGIKSVTLQFEGDFAYGHLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLIDDNIDIQ 226

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++ +D   +T+R+ GAGGQ+VN  ++AVR+ H PTG++++ Q+ RSQ +NK  A  +L++
Sbjct: 227 VNPADLEFETFRSGGAGGQNVNKVETAVRLYHKPTGIIIKNQESRSQLQNKENAIRLLKS 286

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +LYE+E++KR E +   ES K +I WG QIR+YVL PY+++KD RT+ E ++  DVLDGD
Sbjct: 287 QLYEIEMRKRREKSAAIESDKKKIEWGSQIRNYVLHPYKLIKDNRTDYETSNVQDVLDGD 346

Query: 343 LDDFMKATL 351
           LD+F+KA L
Sbjct: 347 LDEFIKAYL 355


>gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 372

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/359 (40%), Positives = 228/359 (63%), Gaps = 11/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   ++ +  +   D   ++++ LN K   P LW +   A+ +     H  + +  I ++
Sbjct: 12  LRTTMDNIVAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQM 71

Query: 63  QDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++E+A E+ D    IL E   +L++++ ++   +  +LL GE D  +A + 
Sbjct: 72  SERIDDLEAMVEMAAEDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELELQKREEIA 296
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L    +E E  K++E+A
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++S     WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 312 GDVKAS-----WGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|317486373|ref|ZP_07945201.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
 gi|316922362|gb|EFV43620.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
          Length = 329

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 140/243 (57%), Positives = 170/243 (69%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D  DA LE+H GAGGTE+QDWA ML RMY RWA+   F  E L+   G+EAGIKS 
Sbjct: 75  SSEEDHADAILEIHPGAGGTEAQDWAQMLQRMYLRWADSHGFSVEELDFLPGDEAGIKSV 134

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +L I G N YG+LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P   D IEIEI ESD 
Sbjct: 135 SLRISGENVYGFLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIEIEIKESDL 194

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           R+D + ASG GGQ VNTT SAVRITHIP+G+ VQCQ ERSQH NK  A  +LR +LY+LE
Sbjct: 195 RVDIFCASGPGGQGVNTTYSAVRITHIPSGISVQCQNERSQHHNKDSAMRILRGRLYDLE 254

Query: 289 LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           L KR+       + K  I +G QIR+Y LQPY++VKD R N E      VLDG +D  ++
Sbjct: 255 LSKRDAARQAEYAGKNAISFGSQIRTYTLQPYRLVKDHRNNCEIGDTDAVLDGRIDKLLR 314

Query: 349 ATL 351
             L
Sbjct: 315 DYL 317


>gi|219684785|ref|ZP_03539727.1| peptide chain release factor 2 [Borrelia garinii PBr]
 gi|219671730|gb|EED28785.1| peptide chain release factor 2 [Borrelia garinii PBr]
          Length = 350

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/348 (44%), Positives = 222/348 (63%), Gaps = 14/348 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ D
Sbjct: 6   AFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123
              L E+   E D + L+        I+  V  KQ++ LL+      E D N+A+L +H+
Sbjct: 66  LSDLCEIVENEKDINSLE--------IEFNVLEKQYKDLLTISYFKEELDINNAFLTIHS 117

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK 
Sbjct: 118 GAGGTEACDWVTMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 176

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHV
Sbjct: 177 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHV 236

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K ++     +  K
Sbjct: 237 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQELK 296

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 297 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344


>gi|329946372|ref|ZP_08293939.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328527348|gb|EGF54346.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 373

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 151/358 (42%), Positives = 222/358 (62%), Gaps = 6/358 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE   D   IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGDDAAEILAEAESDLTAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+ ++  + L     EEAG+KS T  +  P AY
Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L L+++EE A  
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308

Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            E +   +  WG Q+RSYVL PYQMVKDLRT+ E  +P  V DGD+D F+ A +  +K
Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTSFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|158521778|ref|YP_001529648.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
 gi|158510604|gb|ABW67571.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
          Length = 337

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 160/331 (48%), Positives = 221/331 (66%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL+ +         W +   A  L++ER  L + +  + E+   + D  +LLELA EE 
Sbjct: 3   ERLAEIEALVAREGAWDDPERAATLLKERSLLSDRLDLLSELGREVEDAEVLLELAEEEA 62

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D     E +  ++ ++ ++E    +  LS E D  DA + ++AGAGGT++QDWA ML RM
Sbjct: 63  DSDAAAEVTRRVEGVRKKIEKLSIDLTLSDEDDPADAIVAINAGAGGTDAQDWAEMLFRM 122

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTRW E++ +K E ++   G+EAGIKSAT   KG NA+G+LK E GVHRLVRISP++++ 
Sbjct: 123 YTRWIERKGYKLEMIDHQPGDEAGIKSATFSAKGLNAFGYLKNESGVHRLVRISPFNASG 182

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +R TSF+S++V+P +D  I+I+I E D RIDT+RASGAGGQHVN T SAVRITH P+GVV
Sbjct: 183 KRQTSFASVFVFPQIDRQIDIDIDEKDLRIDTFRASGAGGQHVNKTSSAVRITHYPSGVV 242

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQQERSQ +N+  A  +LRA+LY+LE  K+ +     E+ K +I WG QIRSY L PY
Sbjct: 243 VQCQQERSQLRNREIAMAVLRARLYKLEKDKQNQKLQDMEAGKDDIAWGSQIRSYFLHPY 302

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Q  KD RT+ E      VLDG++D F++A L
Sbjct: 303 QKAKDHRTDFEIGDVYSVLDGEIDPFIEAVL 333


>gi|303247215|ref|ZP_07333489.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
 gi|302491374|gb|EFL51262.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
          Length = 307

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 144/279 (51%), Positives = 195/279 (69%), Gaps = 3/279 (1%)

Query: 75  LALEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+L +DD S  +L   ++ +  +  E+   +  +    E D+ DA LE+H GAGGTE+QD
Sbjct: 23  LSLAKDDGSPEVLDALAEQIATLDGELADAELAAFFRSE-DNVDAILEIHPGAGGTEAQD 81

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMY RWAE+++F  + L+   G+EAG+KS TL   GP AYG L  E+G+HRL+R
Sbjct: 82  WAEMLLRMYRRWAERKEFGVKILDYLPGDEAGLKSVTLQFSGPYAYGMLAAEKGIHRLIR 141

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DS+ RRHTSF+S+ VYP     I+I+I E D RID +RASG GGQHVN T SA+RI
Sbjct: 142 ISPFDSSGRRHTSFASVDVYPDAGVDIDIDIKEDDLRIDVFRASGPGGQHVNKTSSAIRI 201

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VVQCQ E+SQH+N+  A  +L+A+LY+LEL+K +        SK  IG+G QI
Sbjct: 202 THLPTGIVVQCQNEKSQHRNRETAMKVLKARLYDLELKKLQAEKQESYESKNAIGFGSQI 261

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y +QPY++VKD RT ++      VLDGDLD F++  L
Sbjct: 262 RTYTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGYL 300


>gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 291

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 143/281 (50%), Positives = 195/281 (69%), Gaps = 2/281 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++EL   E D  +LQE    + ++  +++  + + LLSG  DS  A L ++AGAGGT++Q
Sbjct: 1   MVELLELEADEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML+RMYTRWAE   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 61  DWAFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D+S+ +EI E D  I T RA G GGQ+VN  ++AVR
Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEITTSRAGGKGGQNVNKVETAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           I HIPTGV V+C +ERSQ +NK +A   L+AKL  +  ++R +EIA I      E  WG 
Sbjct: 181 IVHIPTGVAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEI-RGDMVEASWGN 239

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQ+VKDLRTN+E T+  DV++GDLD+F++A L
Sbjct: 240 QIRNYVFHPYQIVKDLRTNLETTAIGDVMNGDLDNFIQAYL 280


>gi|219685347|ref|ZP_03540166.1| peptide chain release factor 2 [Borrelia garinii Far04]
 gi|219673120|gb|EED30140.1| peptide chain release factor 2 [Borrelia garinii Far04]
          Length = 350

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/348 (45%), Positives = 221/348 (63%), Gaps = 14/348 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ D
Sbjct: 6   AFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123
              L E+   E D + L+        I+  V  KQ++ LL+      E D N A+L +H+
Sbjct: 66  LSDLCEIIENEKDINSLE--------IEFNVLEKQYKDLLTISYFKEELDINSAFLTIHS 117

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK 
Sbjct: 118 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 176

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHV
Sbjct: 177 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHV 236

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     +  K
Sbjct: 237 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQELK 296

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 297 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344


>gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803]
 gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803]
          Length = 356

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/334 (45%), Positives = 211/334 (63%), Gaps = 9/334 (2%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           LN + +D       P  W +   A+  MR    +   +  +   Q  + D    LEL   
Sbjct: 11  LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQATLELYDL 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +L E    L +++ +++  + E LLSGE D   A L ++AGAGGT++QDWA MLL
Sbjct: 71  EPDDDMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE R  K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRLVRISP+++
Sbjct: 131 RMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AVRI H+PTG
Sbjct: 191 NDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+YV 
Sbjct: 251 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQMVKDLRT  E      V+DGDLD F++A L
Sbjct: 310 HPYQMVKDLRTQEETNDVQGVMDGDLDPFIQALL 343


>gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 238

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 139/235 (59%), Positives = 177/235 (75%), Gaps = 2/235 (0%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGG E+ DWA ML+RMYTR+ E+R FK +  ++++ E  GIKSAT+ IKG  AYG+
Sbjct: 3   IHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAYGY 62

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI   D RIDTYRASGAGG
Sbjct: 63  LKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 122

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIG 299
           QHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL ++ E + RE+I +I 
Sbjct: 123 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDI- 181

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+ A LA K
Sbjct: 182 QGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 236


>gi|154506039|ref|ZP_02042777.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
 gi|153793538|gb|EDN75958.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
          Length = 314

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 221/310 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L +++  I+++     D  +L+E++ EE D   +QE  + L R + E E  + +
Sbjct: 1   MQVLKSLQDSVKQIEQMYADYEDLGLLIEMSQEEQDEETVQEIEEELLRFEGEFEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GE D + A + +HAGAGGTES DWANML RMYTRWAEK+ F  E L+  +G+ AGI
Sbjct: 61  TLLTGEYDRDHAIVTLHAGAGGTESCDWANMLYRMYTRWAEKKGFSVEVLDYLEGDVAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  ++G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S  V P +++ I+IEI++
Sbjct: 121 KGVTFEVRGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEEDIDIEIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ +  +       EIG+G QIRSYV+QPY +VKD RTN+E ++ + VLDG+LD 
Sbjct: 241 LMKQQEQADKVSGIRGEIKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVLDGNLDP 300

Query: 346 FMKATLAIKK 355
           F+ A L+  K
Sbjct: 301 FINAYLSAPK 310


>gi|148243347|ref|YP_001228504.1| peptide chain release factor 2 [Synechococcus sp. RCC307]
 gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307]
          Length = 349

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/320 (45%), Positives = 211/320 (65%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+  MR+   +   +  ++  +  + D    LEL   E D ++L+E +  L
Sbjct: 19  PDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLELYDLEPDDALLEEANGGL 78

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           Q ++L ++  + E LLSG  D   A + ++AGAGGT++QDWA ML+RMYTRWAE R  K 
Sbjct: 79  QELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQDWALMLMRMYTRWAEDRGMKV 138

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+ +GEEAGIKS T+ ++G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 139 TVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGVEVM 198

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +++ +++EI + D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V+C QERSQ +N
Sbjct: 199 PKLEEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQN 258

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L++KL  +  ++R  EIA+I      E  WG QIR+YV  PYQMVKDLRTN E
Sbjct: 259 KEKAMALLKSKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRTNEE 317

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            T    V+DGDLD F+++ L
Sbjct: 318 TTDVQGVMDGDLDPFIQSLL 337


>gi|160878415|ref|YP_001557383.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
 gi|160427081|gb|ABX40644.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
          Length = 333

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/321 (50%), Positives = 220/321 (68%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P+ W +  +++  M+E ++L + +S    ++ +  D L LLE+  EE+D  ++ E   
Sbjct: 2   EEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIEQ 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L++    +E  +  +LLS E D ++A L +HAGAGGTES DWA+ML RMY RWA+K+ +
Sbjct: 62  ELEQFIDALEELRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRWADKKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            TE L+  DGEEAG KS TL I G NAYG LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 TTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ I+IEI++ D RIDTYR+SGAGGQHVN T SA+RITHIPTG VVQCQ ERSQ 
Sbjct: 182 VMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +NK +A  ML+AKLY  + ++     +       +I +G QIRSYVLQPY MVKD RTN 
Sbjct: 242 QNKDKAMQMLKAKLYLKKKEENAAKESGIRGEIRDINFGNQIRSYVLQPYTMVKDHRTNT 301

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           + ++   VLDG++D F+ A L
Sbjct: 302 DVSNALGVLDGNIDPFINAYL 322


>gi|51598335|ref|YP_072523.1| peptide chain release factor 2 [Borrelia garinii PBi]
 gi|51572906|gb|AAU06931.1| peptide chain release factor 2 [Borrelia garinii PBi]
          Length = 350

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/348 (44%), Positives = 222/348 (63%), Gaps = 14/348 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ D
Sbjct: 6   AFGGSFDKKEIQDKIEKYEKEIHQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123
              L E+   E D + L+        I+  V  KQ+++LL+      E D N A+L +H+
Sbjct: 66  LSDLCEIVENEKDINSLE--------IEFNVLEKQYKNLLTISYFKEELDINSAFLTIHS 117

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK 
Sbjct: 118 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSITIEIKGEYAYGLLKS 176

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHV
Sbjct: 177 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHV 236

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K ++     +  K
Sbjct: 237 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQEVK 296

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 297 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344


>gi|312147930|gb|ADQ30589.1| peptide chain release factor 2 [Borrelia burgdorferi JD1]
          Length = 358

 Score =  286 bits (733), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/328 (48%), Positives = 220/328 (67%), Gaps = 20/328 (6%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP   Q VI+A+ +++      N I   +E+ +++ D   L E+A  E D + L+   + 
Sbjct: 43  DPKRAQEVIKAQSILK------NKIDPWEELINKIKDLSDLCEIAENEKDTNGLEIEFNT 96

Query: 92  LQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           L+        KQ++ LL+      E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE
Sbjct: 97  LE--------KQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAE 148

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF
Sbjct: 149 RKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSF 207

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +
Sbjct: 208 ASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSD 267

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD 
Sbjct: 268 RSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDH 327

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT  E ++ + V+DG++D+F++  L  K
Sbjct: 328 RTKFENSNTTSVMDGNIDNFIEEYLKWK 355


>gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
 gi|229470354|sp|A9WPT6|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
          Length = 374

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 146/339 (43%), Positives = 217/339 (64%), Gaps = 1/339 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D D+  + ++ L+ +   P LW N  EA+ +  +  H  + +  ++ +  R+ D  +L
Sbjct: 26  VIDADSLRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETLTARIDDLEVL 85

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +ELA  E D   L E S  L  ++  ++  +  +LL+GE D  +A + + +GAGG ++ D
Sbjct: 86  VELAESEHDEDSLAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIRSGAGGVDAAD 145

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L  E G HRLVR
Sbjct: 146 FAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVR 205

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RR TSF+++ V P+++ +  IEI ++D R+D +R+SG GGQ VNTTDSAVR+
Sbjct: 206 ISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNDIRVDVFRSSGPGGQSVNTTDSAVRL 265

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG VV  Q E+SQ +N+A A  +L+++L  L+ Q+ E+      +   +  WG Q+
Sbjct: 266 THLPTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKKQQ-EDAEKKALAGDVKASWGDQM 324

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL PYQMVKDLRT  E  + S VLDGD+DDF+ A +
Sbjct: 325 RSYVLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGI 363


>gi|317495961|ref|ZP_07954323.1| peptide chain release 2 [Gemella moribillum M424]
 gi|316913865|gb|EFV35349.1| peptide chain release 2 [Gemella moribillum M424]
          Length = 372

 Score =  286 bits (732), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 155/332 (46%), Positives = 213/332 (64%), Gaps = 1/332 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR++ +     D   W +   A  L+ E + +   +     + D L  +  ++E   +ED
Sbjct: 31  QRVAEIENMMLDADFWNDSETASTLVTESKSIKKELDEFSAMLDYLNHSEEMIEFLNDED 90

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  I QE  + ++ +K +VE   F  L + E D+N A LE+HAGAGGT++ DWA ++LRM
Sbjct: 91  DEEIYQELIETVRDLKQQVEDFSFRLLFAEEYDNNTAILEIHAGAGGTDATDWAEIMLRM 150

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+  K+      L    G+  G+KSATL I+G  AYG LKGE+GVHR+VRISP+D + 
Sbjct: 151 YERFFSKQGLTYSYLNYQSGDITGVKSATLKIEGDFAYGLLKGEKGVHRVVRISPFDPSG 210

Query: 201 RRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           +RHTSF+SI V P   D+   IEI+  D +IDTYRA GAGGQH+NTTDSAVRITH+PTG+
Sbjct: 211 KRHTSFASIDVIPEFSDEEANIEINIEDLKIDTYRAQGAGGQHINTTDSAVRITHLPTGI 270

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VVQ Q ERSQ KN+  A   L++KL++LEL+++E         + +IGWG QIRSYV  P
Sbjct: 271 VVQSQAERSQIKNRDFAMKNLKSKLHQLELEEKERELASIRGEQKDIGWGSQIRSYVFTP 330

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 331 YTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
 gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
          Length = 356

 Score =  286 bits (732), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 151/334 (45%), Positives = 212/334 (63%), Gaps = 9/334 (2%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           LN + +D       P  W +   A+  MR    +   +  ++  Q  + D    LEL   
Sbjct: 11  LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQATLELYDL 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +L E    L +++ +++  + E LLSGE D   A L ++AGAGGT++QDWA MLL
Sbjct: 71  EPDEDMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE R  K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRLVRISP+++
Sbjct: 131 RMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AVRI HIPTG
Sbjct: 191 NDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+YV 
Sbjct: 251 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQMVKDLRT  E      V+DGDL+ F++A L
Sbjct: 310 HPYQMVKDLRTQEETNDVQGVMDGDLEPFIQALL 343


>gi|183981542|ref|YP_001849833.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
 gi|238689234|sp|B2HGJ2|RF2_MYCMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|183174868|gb|ACC39978.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
          Length = 371

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 161/354 (45%), Positives = 226/354 (63%), Gaps = 8/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +  ++     + ++ ++E  +  +LLSGE D  +A +
Sbjct: 72  RRRLEDLPVLYELAAEEEGAAAGEALAEADAEFKALRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  LE ++ EE A + 
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRIEERAEL- 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGI 362


>gi|220918000|ref|YP_002493304.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955854|gb|ACL66238.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 309

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 143/266 (53%), Positives = 192/266 (72%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +EV +GA
Sbjct: 12  LDDAQALCELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEVKSGA 71

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGWLK E+
Sbjct: 72  GGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWLKAEK 131

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGGQ VN 
Sbjct: 132 GVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQKVNK 191

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH+PTG+VV  Q ERSQ KN++ AW +LRAKLY+LE +KR    +  E+ K +
Sbjct: 192 TDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEALKKD 251

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIE 331
           I +G QIRSYVLQPYQMVKDLRT +E
Sbjct: 252 IDFGSQIRSYVLQPYQMVKDLRTGVE 277


>gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
 gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
          Length = 372

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 148/337 (43%), Positives = 218/337 (64%), Gaps = 5/337 (1%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA---LE 78
           R++ L+ K   P LW N   A+ +  E  H    +  I+++ +R+ D   ++E+A   L+
Sbjct: 31  RIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGRIEKMVERIDDLETIVEMAEEDLD 90

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +L+E   +L  I+  +   + ++LLSGE D   A + + AGAGG ++ D+A MLL
Sbjct: 91  EKDL-LLEEAEADLAGIRQALADLEIKTLLSGEYDERSAVVTIRAGAGGVDAADFAEMLL 149

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWAE+  + T+ ++    EEAG+KSAT  +  P AYG L  E G HRLVRISP+D+
Sbjct: 150 RMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGTHRLVRISPFDN 209

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RR TSF+++ V P+++ +  IEI ES+ +ID +R+SG GGQ VNTTDSAVR+THIPTG
Sbjct: 210 QGRRQTSFAAVEVIPLIETTDHIEIPESELKIDVFRSSGPGGQSVNTTDSAVRMTHIPTG 269

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV  Q E+SQ +N+A A  +L+++L +L   + E+ A    +   +  WG Q+RSYVLQ
Sbjct: 270 IVVSMQNEKSQIQNRAAALRVLQSRLLQLR-HEEEQAAKKALAGDVKASWGDQMRSYVLQ 328

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PYQMVKDLRT+ E  +   V DG++DDF+ A +  +K
Sbjct: 329 PYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWRK 365


>gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
 gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
          Length = 373

 Score =  285 bits (730), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 145/345 (42%), Positives = 223/345 (64%), Gaps = 11/345 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   ++++ LN K   P LW +   A+ +     H  + +  I ++ +R+ D   ++++A
Sbjct: 26  DKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERIDDLEAMVDMA 85

Query: 77  LEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            E+ D    IL E   +L++++ ++   +  +LL GE D  +A + + +GAGG ++ D+A
Sbjct: 86  AEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG L  E G HRLVRIS
Sbjct: 146 EILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ VNTTDSAVR+TH
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTH 265

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELELQKREEIANIGESSKTEIGWGR 310
           IPTG+VV  Q E+SQ +N+A A  +L+++L    +E E  K++E+A   ++S     WG 
Sbjct: 266 IPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS-----WGD 320

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 321 QMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1118]
          Length = 332

 Score =  285 bits (730), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 156/320 (48%), Positives = 208/320 (65%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           P  W +  +A+ L+ E   L +   SF+K +Q    D    +EL  EE D  + +ET ++
Sbjct: 4   PDFWNDQEKAQKLISENNVLKEKRDSFLK-LQKGYEDESTAVELLREEPDPDLQKETEED 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  ++ E    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+ +   FK
Sbjct: 63  LATLQDEFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDSAGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+ V
Sbjct: 123 FEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT  E
Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
               + V+DG L  F+ + L
Sbjct: 303 TADANGVMDGKLQPFIYSYL 322


>gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
 gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
          Length = 290

 Score =  285 bits (730), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 139/251 (55%), Positives = 187/251 (74%), Gaps = 4/251 (1%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E LLSG  D N+A + ++AGAGGT++QDWA MLLRMYTRWAE+  ++T   E+ +GEE
Sbjct: 35  ELEQLLSGPYDKNNAIVTINAGAGGTDAQDWAEMLLRMYTRWAERHGYQTHLAELSEGEE 94

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIKSATL I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D S+ +E
Sbjct: 95  AGIKSATLEIRGRYAYGYLRSEKGTHRLVRISPFNANGKRQTSFAGVDVMPELDQSVTVE 154

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ESD  I T R+ G GGQ+VN  ++AVRI H PTG+ V+C QERSQ +NK +A  +L+A
Sbjct: 155 IPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAVRCTQERSQLQNKEKALAILKA 214

Query: 283 KLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           KL  + + QK +EIA+I GE+   E  WG QIR+YV  PYQ+VKDLRT +E T+  DV+D
Sbjct: 215 KLLVIAQEQKAKEIADIRGEA--VEAAWGNQIRNYVFHPYQLVKDLRTEVETTAIQDVMD 272

Query: 341 GDLDDFMKATL 351
           G+LD F++A L
Sbjct: 273 GNLDPFIQAYL 283


>gi|225012847|ref|ZP_03703280.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
 gi|225002969|gb|EEG40946.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
          Length = 314

 Score =  285 bits (730), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 142/283 (50%), Positives = 200/283 (70%), Gaps = 11/283 (3%)

Query: 80  DDCSILQE--TSDNLQRIKLEVEYK---------QFESLLSGEADSNDAYLEVHAGAGGT 128
           DD  +L E   S + + +++  +Y+         +F ++LS E D   A L++ AGAGGT
Sbjct: 22  DDLEVLMEFEKSGDAEAVEVNSQYESSLELLEALEFRNMLSDEGDDLSAVLQITAGAGGT 81

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES DWA ML+RMY  W EK+ +K + L    G+ AGIK+ TL ++G  A+GWLKGE GVH
Sbjct: 82  ESCDWAEMLMRMYLMWGEKQGYKIKELNHQAGDVAGIKTVTLELEGDFAFGWLKGENGVH 141

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DSN++RHTSF+S++VYP+VDDSIEI IS SD   +T RASGAGGQ+VN  ++
Sbjct: 142 RLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIVISPSDYTWETMRASGAGGQNVNKVET 201

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ H PTG++++  + RSQ +NK +A  +LR++LYE+ELQK+    +  E+SK +I W
Sbjct: 202 AVRLRHHPTGIIIENSETRSQLENKNKAMQLLRSQLYEIELQKKLSARDEIEASKKKIEW 261

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIR+YV+ PY++VKD+RT  E T    V++G +D F+KA L
Sbjct: 262 GSQIRNYVMHPYKLVKDVRTQHEVTDVDAVMNGQIDPFLKAYL 304


>gi|297571771|ref|YP_003697545.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932118|gb|ADH92926.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 376

 Score =  285 bits (730), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 150/349 (42%), Positives = 219/349 (62%), Gaps = 20/349 (5%)

Query: 19  AVQRLSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           AV  ++ L TK  D       P LW +  +A+ +  +  H  + +  + ++ +R+ D   
Sbjct: 21  AVTDVTALQTKIADLTEQSGAPDLWDDPEKAQGVTSQLSHAQSELDRVVKMGERVADLET 80

Query: 72  LLELALEEDD------CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L ++A+EE +        +  E    L+R++ ++   + ++LLSGE D  DA + + +GA
Sbjct: 81  LYDMAVEESESDAAMGAELFAEVDGELERVRTDLSELEIKTLLSGEYDERDAVVTIRSGA 140

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ++ DWA ML RMY RWAE+R +KT+ ++    EEAGIKS T  +  P AYG L  E 
Sbjct: 141 GGVDAADWAQMLQRMYLRWAERRGYKTKVMDTSYAEEAGIKSTTFEVSAPYAYGTLSVEA 200

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I ES+ +ID +R+SG GGQ VNT
Sbjct: 201 GTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIDIPESELKIDVFRSSGPGGQSVNT 260

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKT 304
           TDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L    LQKR EE A I +    
Sbjct: 261 TDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRL----LQKRHEEEAAIKKELAG 316

Query: 305 EI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++   WG Q+RSYVL PYQMVKDLRT  E  +   V DGD+D F+ A +
Sbjct: 317 DVKGAWGDQMRSYVLHPYQMVKDLRTGFEVGNTESVFDGDIDGFIDAGI 365


>gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39]
          Length = 316

 Score =  285 bits (729), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 145/300 (48%), Positives = 206/300 (68%), Gaps = 6/300 (2%)

Query: 57  SFIKEIQD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           S +++ QD    L D   + EL   EDD S+ QE   N+  +  +++  + + LLSG  D
Sbjct: 6   SVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLSGPYD 65

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            + A L ++AGAGGT++QDWA MLLRMYTRW E + +K    E+ +G+EAGIKSATL ++
Sbjct: 66  RSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEME 125

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDT 232
           GP AYG+LK E+G HRLVRISP+++N +R TSF+ + + P++D+ +I ++I E D  I T
Sbjct: 126 GPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITT 185

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA G GGQ+VN  ++AVRI HIPTG+ V+C QERSQ +N+ +A  +L+AKL  +  ++R
Sbjct: 186 SRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQR 245

Query: 293 -EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + IA I      E  WG QIR+YV  PYQMVKDLRT  E T+ +DV++G+LD F++A L
Sbjct: 246 AQAIAEI-RGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYL 304


>gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
 gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
          Length = 356

 Score =  285 bits (729), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 153/334 (45%), Positives = 211/334 (63%), Gaps = 9/334 (2%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           LN + +D       P  W +   A+  MR    +   +S +   +  + D    LEL   
Sbjct: 11  LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQATLELYEL 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +LQE  + L +++  ++  + E LLSGE D   A L ++AGAGGT++QDWA MLL
Sbjct: 71  EPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRLVRISP+++
Sbjct: 131 RMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AVRI HIPTG
Sbjct: 191 NDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C QERSQ +NK +A  +L AKL  +  ++R  EIA+I      E  WG QIR+YV 
Sbjct: 251 LFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QPYQMVKDLRTN E      V+DG LD F+ A+L
Sbjct: 310 QPYQMVKDLRTNEETNDVQAVMDGALDPFIDASL 343


>gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
 gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
          Length = 290

 Score =  285 bits (729), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 143/281 (50%), Positives = 195/281 (69%), Gaps = 5/281 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLEL   E D  +LQE    + ++  +++  + + LLSG  DS  A L ++AGAGGT++Q
Sbjct: 3   LLEL---EADEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQ 59

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML+RMYTRWAE   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 60  DWAFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLV 119

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D+S+ +EI E D  + T RA G GGQ+VN  ++AVR
Sbjct: 120 RISPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEVTTSRAGGKGGQNVNKVETAVR 179

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           I HIPTG+ V+C +ERSQ +NK +A   L+AKL  +  ++R +EIA I      E  WG 
Sbjct: 180 IVHIPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEI-RGDMVEASWGN 238

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQ+VKDLRTN+E T+  DV++GDLD+F++A L
Sbjct: 239 QIRNYVFHPYQIVKDLRTNLETTAIIDVMNGDLDNFIQAYL 279


>gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
 gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
          Length = 361

 Score =  285 bits (729), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 146/348 (41%), Positives = 220/348 (63%), Gaps = 2/348 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R L   GG+FD     +++S L  +  +P LW +   A+ +M++   L + ++    ++ 
Sbjct: 9   RVLPPSGGIFDLATKQEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLES 68

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +L     L++L   E D ++  E +  ++  + E+  ++   LLSG  D  DA++ + AG
Sbjct: 69  QLISLDELIDLTEAEGDATLYTEIAAEVRAAQKELAQRELALLLSGPYDDRDAFVSIQAG 128

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GGT++QDWA+M+LRMY RWAE R +    +++  G+EAGIKSATL ++GP AYG ++ E
Sbjct: 129 MGGTDAQDWADMMLRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAE 188

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRL+R+SP+++   R TSF+ + V P VDD+ E+ I   D RID +R+ G GGQ VN
Sbjct: 189 AGVHRLIRLSPFNAAHTRQTSFARVEVVPEVDDAPEVTIKPEDLRIDVFRSGGHGGQGVN 248

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSK 303
           TTDSAVR+TH+PTG+VV CQ ERSQ +N+  A  +LR +L E ELQ++ EE A +     
Sbjct: 249 TTDSAVRLTHLPTGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARL-RGEH 307

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +  +G Q+R+Y L P  +VKD RT  E ++   VLDG LD F++A L
Sbjct: 308 RDAAFGSQMRTYYLHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYL 355


>gi|210631232|ref|ZP_03296815.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
 gi|210160119|gb|EEA91090.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
          Length = 376

 Score =  285 bits (729), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 151/348 (43%), Positives = 208/348 (59%), Gaps = 3/348 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +L  +      + A  R++ L   +  P  W +   A+  M E   +   +  +   
Sbjct: 17  LSARLTEVEAYLHIEEARGRVTELEEASAAPGFWDDAEAARAYMAELAQVKGDVGLVDRA 76

Query: 63  QDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +RL D    LELA E  +D    + E +   + +   ++  +  S  +GE D   A L 
Sbjct: 77  HERLSDARAALELADEMGQDGAEFIAEAAAAAEELTRAIDEMELSSWFTGEFDHGSAILS 136

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+QDW  ML +MY ++  +R +K    +    E  GI  AT+ ++G +A+G 
Sbjct: 137 IKPGQGGLEAQDWTFMLFKMYMKYFARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGM 196

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVRISP D+  RR T+F+ + V PV+ D IEIE++  D R+D Y ASG GG
Sbjct: 197 LRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIEIEVAPDDIRVDVYHASGPGG 256

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA    +L+A+LYELEL+KR E  +   
Sbjct: 257 QGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELEKRAETLDEIR 316

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
             KTEIG+G QIRSYVL PYQMVKDLR+ +E ++   VL DGDLD F+
Sbjct: 317 GPKTEIGFGNQIRSYVLYPYQMVKDLRSGVETSNVDSVLEDGDLDPFI 364


>gi|149371331|ref|ZP_01890817.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
 gi|149355469|gb|EDM44028.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
          Length = 317

 Score =  285 bits (729), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 133/255 (52%), Positives = 187/255 (73%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F ++LS E D+  A L++ AGAGGTES DWANML+RMY  WAE+  FK + L   
Sbjct: 52  IEALEFRNMLSEEGDAMSAVLQITAGAGGTESCDWANMLMRMYLMWAERNGFKVKELNYQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            G+ AGIK+ TL I G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+
Sbjct: 112 AGDVAGIKTVTLEIDGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEI+I+ +D   D  R+ GAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  
Sbjct: 172 IEIDINPADIGWDFARSGGAGGQNVNKVETKAILTHKPSGIVIHNSETRSQLENRQKAMQ 231

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           ML+++LYE+EL+K++      E +K  I WG QIR+YVLQPY++VKD+R N E T+P  +
Sbjct: 232 MLKSQLYEIELRKQQAQRAEIEGNKMAIEWGSQIRNYVLQPYKLVKDVRNNHESTNPDAI 291

Query: 339 LDGDLDDFMKATLAI 353
           LDG +D+F+KA L +
Sbjct: 292 LDGHIDEFLKAYLMM 306


>gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1]
 gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides
           sp. BAV1]
          Length = 356

 Score =  285 bits (729), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 14/354 (3%)

Query: 7   LNCLGGLF----DWDNAVQRLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +N     F    D+D + + L    L T + +P  WQ+   A+  M++           +
Sbjct: 1   MNLRAAFFLTWCDFDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWR 60

Query: 61  EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++ R+ D   L ELA L  +D S+  E    +  +  E++  +     SG+ D+ +A L
Sbjct: 61  GLERRIND---LTELAVLSREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALL 117

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            VHAGAGG ESQDWA MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG
Sbjct: 118 TVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYG 177

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E GVHRL+R+SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG G
Sbjct: 178 FLKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPG 237

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI 298
           GQ+V    +AVR+THIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR EE A +
Sbjct: 238 GQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKL 297

Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            GE    E  WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L
Sbjct: 298 KGERISAE--WGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYL 349


>gi|89898648|ref|YP_515758.1| peptide chain release factor 2 [Chlamydophila felis Fe/C-56]
 gi|89332020|dbj|BAE81613.1| hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 315

 Score =  285 bits (729), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 142/251 (56%), Positives = 184/251 (73%), Gaps = 1/251 (0%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + + LLSGE D N  +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  DG+ 
Sbjct: 59  EIQRLLSGEVDKNSCFLTINAGAGGTESCDWVEMLFRMYCRWASEHRWKVEVIDRQDGDV 118

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK  T+   G  AYG+ K E+GVHRLVRISP++SN++RHTSF+S+ VYP +DD IEI+
Sbjct: 119 AGIKHVTVKFSGDYAYGYAKAERGVHRLVRISPFNSNAKRHTSFASVDVYPEIDDEIEID 178

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG+ V CQ ERSQ +N+     MLRA
Sbjct: 179 IQPNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGITVSCQNERSQLQNRESCMKMLRA 238

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           ++Y+  LQ+R E   +   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+
Sbjct: 239 RMYQQILQERLEKQLLERKNKKEIAWGSQIRNYVFQPYTLVKDVRTGYETGNVQAMMDGE 298

Query: 343 -LDDFMKATLA 352
            LDDF+KA LA
Sbjct: 299 LLDDFVKAYLA 309


>gi|126664153|ref|ZP_01735146.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
 gi|126623867|gb|EAZ94562.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
          Length = 285

 Score =  285 bits (729), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 131/268 (48%), Positives = 195/268 (72%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E     Q     +E  +F ++LS E DS  A L++ AGAGGTES DWA+ML+RMY  W 
Sbjct: 12  EEVETQYQHTLSHIEDLEFRNMLSDEGDSMSAVLQITAGAGGTESCDWASMLMRMYLMWG 71

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK+ +K + L   +GE AGIK+ TL  +G  A+G+LKGE GVHRLVRISP+DSN++RHTS
Sbjct: 72  EKQGYKIKELNFQEGEVAGIKTVTLEFEGDFAFGYLKGENGVHRLVRISPFDSNAKRHTS 131

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++VYP+VDD+IEI+I+ +D  I T R+SGAGGQ+VN  ++ V++ H PTG+ +QC +
Sbjct: 132 FASVYVYPLVDDTIEIDINPADIEIITSRSSGAGGQNVNKVETKVQLFHKPTGIQIQCSE 191

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQ  N+ +A  ML+++LYE+EL+K++   +  E+ K +I WG QIR+YV+ PY++VKD
Sbjct: 192 TRSQQDNRQRAMQMLKSQLYEIELKKQQAQRSDIEAGKMKIEWGSQIRNYVMHPYKLVKD 251

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +R+  E +    +++G++D+F+KA L +
Sbjct: 252 VRSGHESSDVEGIMNGEIDNFLKAYLMM 279


>gi|145220477|ref|YP_001131186.1| peptide chain release factor 2 [Prosthecochloris vibrioformis DSM
           265]
 gi|145206641|gb|ABP37684.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 300

 Score =  285 bits (728), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 139/280 (49%), Positives = 194/280 (69%), Gaps = 1/280 (0%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L LA E  + S  +E   ++  I+ E++  +F ++LSG+ D  +A + +HAGAGGTE+QD
Sbjct: 18  LTLADELGEESYAEELDASIAAIEAEMDAIEFRNMLSGKDDEGNAIITIHAGAGGTEAQD 77

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML RMY RWAE++ FK    +   G+ AGIK+ATL I+GP AYG+LK E GVHRLVR
Sbjct: 78  WAEMLYRMYMRWAERKGFKIYTDDYQAGDGAGIKTATLEIQGPYAYGYLKAENGVHRLVR 137

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +SP+DSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN  ++AVRI
Sbjct: 138 VSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVETAVRI 197

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H+P+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I WG QI
Sbjct: 198 KHVPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDAKKREVEGKKKKIEWGSQI 257

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYVL   + +KD RTN E+     VLDGD+DDFM A L+
Sbjct: 258 RSYVLDD-RRIKDHRTNHERFDIETVLDGDIDDFMHAYLS 296


>gi|284053267|ref|ZP_06383477.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
          Length = 309

 Score =  285 bits (728), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 142/288 (49%), Positives = 200/288 (69%), Gaps = 3/288 (1%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   + EL   EDD S+ QE   N+  +  +++  + + LLSG  D + A L ++AGA
Sbjct: 11  LEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGA 70

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGT++QDWA MLLRMYTRW E + +K    E+ +G+EAGIKSATL ++GP AYG+LK E+
Sbjct: 71  GGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEMEGPYAYGYLKAEK 130

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVN 244
           G HRLVRISP+++N +R TSF+ + + P++D+ +I ++I E D  I T RA G GGQ+VN
Sbjct: 131 GTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVN 190

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSK 303
             ++AVRI HIPTG+ V+C QERSQ +N+ +A  +L+AKL  +  ++R + IA I     
Sbjct: 191 KVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEI-RGDL 249

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E  WG QIR+YV  PYQMVKDLRT  E T+ +DV++G+LD F++A L
Sbjct: 250 VEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYL 297


>gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
 gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
          Length = 374

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 147/338 (43%), Positives = 216/338 (63%), Gaps = 6/338 (1%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-- 79
           R++ L+ +   P LW +   A+++     H    +  ++++  R+ D   ++E+A EE  
Sbjct: 31  RIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVEDLGSRIDDLEAMVEMAGEEEG 90

Query: 80  -DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            D   +L E   +L  I  ++   +  +LLSGE D  DA + + +GAGG ++ D+A MLL
Sbjct: 91  DDAAELLAEAESDLASISKDLSELEIRTLLSGEYDQRDAVVTIRSGAGGVDAADFAEMLL 150

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWAE+  + T+ L+    EEAG+KS T  +  P AYG L  E G HRLVRISP+D+
Sbjct: 151 RMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAYGTLSVEGGTHRLVRISPFDN 210

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RR TSF+++ V P+++ +  IE+ E+D RID +R+SG GGQ VNTTDSAVRITH+PTG
Sbjct: 211 QGRRQTSFAAVEVIPLIESTDHIEVPETDIRIDVFRSSGPGGQSVNTTDSAVRITHLPTG 270

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVL 317
           +VV  Q E+SQ +N+A A  +L+++L  L L+++EE A   E +   +  WG Q+RSYVL
Sbjct: 271 LVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKKKELAGDVKASWGDQMRSYVL 328

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            PYQMVKDLRT+ E  +P  V DGD+D F+ A +  +K
Sbjct: 329 NPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797264|gb|EDN79684.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
          Length = 373

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/336 (42%), Positives = 218/336 (64%), Gaps = 11/336 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD--CS 83
           LN K   P LW +   A+ +     H  + +  I ++ +R+ D   ++++A E+ D    
Sbjct: 35  LNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERIDDLEAMVDMAAEDPDEGAD 94

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           IL E   +L++++ ++   +  +LL GE D  +A + + +GAGG ++ D+A +LLRMY R
Sbjct: 95  ILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFAEILLRMYLR 154

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE+  + T+ ++    EEAG+KSAT  ++ P AYG L  E G HRLVRISP+D+  RR 
Sbjct: 155 WAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRISPFDNQGRRQ 214

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV  
Sbjct: 215 TSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVSM 274

Query: 264 QQERSQHKNKAQAWNMLRAKL----YELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q E+SQ +N+A A  +L+++L    +E E  K++E+A   ++S     WG Q+RSYVLQP
Sbjct: 275 QDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS-----WGDQMRSYVLQP 329

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           YQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 330 YQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|328773067|gb|EGF83104.1| hypothetical protein BATDEDRAFT_85755 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 367

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/368 (42%), Positives = 231/368 (62%), Gaps = 24/368 (6%)

Query: 1   MKLSRQLNCLGGLF-------DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHL 52
           M LS+  N +  LF       +W+    + S L  + +D +LW  +  EA  + ++   L
Sbjct: 1   MTLSK--NNISKLFKTIDEKKNWEVVESKASDLRDRLKDDNLWTTDTKEAIEIQKDISRL 58

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
           ++ I+   +   +  +   ++ELA EE D ++L+E   +++ ++ ++     +SL++ E 
Sbjct: 59  ESEIAEHSKFTVKWNETQSMIELAKEEGDDTLLKEVVADMEDLEAQLRQYFIKSLMTDEV 118

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +  Y+E+ AGAGG ES DW +ML RMY RW   +     ++    G+ AG+KS+T  I
Sbjct: 119 DQSGCYIEIRAGAGGAESCDWVSMLTRMYERWGADQGHTVTSIAQVKGDVAGLKSSTTQI 178

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS----IEIEISESDC 228
           +G  AYGW K E GVHR VR+SP+DSN++RHTSF S+ V P++  S      IEIS ++ 
Sbjct: 179 QGDYAYGWSKNESGVHRFVRVSPFDSNAKRHTSFVSVQVLPILSTSRLSTKTIEISTNEL 238

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +++  RA GAGGQHVN T+SAVR+THIPTG+ V CQ ERSQ +NKA A  ML++KLY++E
Sbjct: 239 KLEFMRAQGAGGQHVNKTESAVRMTHIPTGITVFCQSERSQVQNKATALEMLKSKLYQVE 298

Query: 289 L-----QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L     QK+E  AN+GE++     WG  IRSYVLQPYQ+VKD RT  + T+  DVL+G L
Sbjct: 299 LDKLSRQKQEHHANLGENA-----WGNHIRSYVLQPYQLVKDTRTGTQTTNVQDVLNGGL 353

Query: 344 DDFMKATL 351
            +FM++ L
Sbjct: 354 QEFMESAL 361


>gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 372

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 220/340 (64%), Gaps = 11/340 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           +++ LN K   P LW +   A+ +     H  + +  +  + +R+ D   ++E+A E+ D
Sbjct: 31  QIAELNEKAAAPDLWDDPARAQEVTSALSHRQSELDRVVRMGERIDDLEAMVEMAGEDPD 90

Query: 82  CS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
            +  IL E + +L  +K +V   +  +LL GE D  +A + + +GAGG ++ D+A +LLR
Sbjct: 91  EAEEILDEAAADLDTLKKDVSDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFAEILLR 150

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG L  E G HRLVRISP+D+ 
Sbjct: 151 MYLRWAERHGYATKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRISPFDNQ 210

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+
Sbjct: 211 GRRQTSFAAVEVIPLIESTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGI 270

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKL----YELELQKREEIANIGESSKTEIGWGRQIRSY 315
           VV  Q E+SQ +N+A A  +L+++L    +E E  K++E+A   ++S     WG Q+RSY
Sbjct: 271 VVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS-----WGDQMRSY 325

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           VLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 326 VLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGIRWRK 365


>gi|218885659|ref|YP_002434980.1| peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|65736690|dbj|BAD98502.1| peptide release factor 2 [Desulfovibrio vulgaris]
 gi|218756613|gb|ACL07512.1| Peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 376

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 9/353 (2%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           Q   L G  D      RL  +  +   P  W N  +   +++E+  L+  I+ ++ ++  
Sbjct: 17  QYASLWGRLDLAGNRNRLDEIERQLSSPDAWNNPEKLTPVLQEKSQLEGEITRLERLET- 75

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ-------FESLLSGEADSNDAY 118
            C   +   L L E++ +  +   + L+ +  +V   Q          LLSG+ D   A 
Sbjct: 76  -CRRDVTEWLTLAEEEEAAGEPGQEALESLAEQVTVLQNLLQETEMNMLLSGKEDRMPAI 134

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+H GAGGTE+QDWA ML+RMY RWA+    K E L+   G+EAG+KS TL + GPNAY
Sbjct: 135 VEIHPGAGGTEAQDWAEMLVRMYLRWADTHDMKAEYLDYLAGDEAGVKSVTLRMAGPNAY 194

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P V   I ++I E+D RID +R+SG 
Sbjct: 195 GLLKGEKGIHRLIRISPFDSSGRRHTSFASVDVIPDVGQEITVDIKETDLRIDIFRSSGP 254

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTT SAVRITH+PTG+  QCQ E+SQH N+  A  +LRA+LYELEL+K EE    
Sbjct: 255 GGQSVNTTSSAVRITHLPTGISAQCQNEKSQHSNRDTAMQILRARLYELELRKLEEEKKA 314

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + K  IG+G QIR+Y LQPY++VKD RTN E      VLDG +D  ++  L
Sbjct: 315 QYAGKDAIGFGSQIRTYTLQPYRLVKDHRTNTEIGDVEAVLDGRIDQLLRDYL 367


>gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311]
 gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift
           [Synechococcus sp. CC9311]
          Length = 375

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/334 (44%), Positives = 210/334 (62%), Gaps = 9/334 (2%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           LN K +D       P  W +   A+  MR    +   +  + + +  + D    LEL   
Sbjct: 30  LNAKQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVDWRGAIDDGQATLELHEL 89

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +L E    L +++  ++  + E LLSGE D   A L ++AGAGGT++QDWA MLL
Sbjct: 90  EPDEDLLGEAQQGLNQLRQALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 149

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE +       E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRLVRISP+++
Sbjct: 150 RMYTRWAEDQGMSVSVNELSEGEEAGIKSTTIEIEGRYAYGYLRNEKGTHRLVRISPFNA 209

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P +D+ +E++I E D  + T R+ GAGGQ+VN  ++AVRI H+PTG
Sbjct: 210 NDKRQTSFAGVEVMPKLDEEVELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTG 269

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+YV 
Sbjct: 270 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 328

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQMVKDLRT  E T    V+DGDL+ F++A L
Sbjct: 329 HPYQMVKDLRTQEETTDVQGVMDGDLNPFIQALL 362


>gi|78188007|ref|YP_378345.1| peptide chain release factor 2 [Chlorobium chlorochromatii CaD3]
 gi|78170206|gb|ABB27302.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           chlorochromatii CaD3]
          Length = 312

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 136/280 (48%), Positives = 196/280 (70%), Gaps = 1/280 (0%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +++ALE  D S   E ++ +  ++  +   +F ++LSG+ D+ +A + +HAGAGGTE+QD
Sbjct: 29  MDIALELQDESFGDELTNTITELEQAIAAIEFRNMLSGKDDAGNAMVTIHAGAGGTEAQD 88

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML RMY RWAE++ FKT   +  +G+ AGIK+ATL I+G  AYG+LK E GVHRLVR
Sbjct: 89  WAEMLYRMYMRWAERKGFKTFTDDYQEGDGAGIKTATLEIQGAYAYGYLKAENGVHRLVR 148

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +SP+D+N+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN  ++AVRI
Sbjct: 149 VSPFDANARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVETAVRI 208

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I WG QI
Sbjct: 209 KHLPTGIVVGCQEERSQLQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKKIEWGSQI 268

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYVL   + +KD RTN E+     VLDGDLDDFM+  L+
Sbjct: 269 RSYVLDD-RRIKDHRTNYERFDIETVLDGDLDDFMEKYLS 307


>gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
 gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
          Length = 356

 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 152/340 (44%), Positives = 210/340 (61%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      R   L      P  W +   A+  MR    +   +  +++ +  + D    
Sbjct: 5   VFDVPALKARQQDLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQAT 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL   E D  +L E  + L  ++  ++  + E LLSGE D   A L ++AGAGGT++QD
Sbjct: 65  LELYDLEPDDDMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWAE    K    E+ +GEEAGIKSAT+ I G  AYG+L+ E+G HRLVR
Sbjct: 125 WAQMLLRMYTRWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P ++D ++I+I + D  + T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG Q
Sbjct: 245 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRT  E T    V+DG LD F++A L
Sbjct: 304 IRNYVFHPYQMVKDLRTQEETTDVQGVMDGHLDPFIQALL 343


>gi|317124427|ref|YP_004098539.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
 gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
          Length = 370

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/351 (40%), Positives = 222/351 (63%), Gaps = 5/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   ++ + G+ D D   +++  L  +  +P+LW +  +A+ +       +     +  +
Sbjct: 12  LRATMDSVRGVTDLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSRANAERDRVLSM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+E+A EE D   + E   +L +IK ++   +  +LLSGE D  +A + + 
Sbjct: 72  DSRINDLETLVEMATEESDQDTMDEALRDLAKIKKDLGELEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KSAT  +  P A+G L 
Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAFGHLN 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI E++ +ID +R+SG GGQ 
Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDSIEIPENELKIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L    LQ++ E A + +  
Sbjct: 252 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLL---LQRKAEEAAVKKEM 308

Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             ++   WG Q+RSYVL PYQMVKDLRT+ E  +P+ V DGD+D F++A +
Sbjct: 309 AGDVKASWGDQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIEAGI 359


>gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219]
 gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219]
          Length = 346

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 221/345 (64%), Gaps = 14/345 (4%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNL 70
           FD D   Q +   N        W +  +A+ +++E   L + +   + + E    L  ++
Sbjct: 5   FDLDQKKQEIQKNNDLMAQEDFWNDQKKAQKIIKENNSLKDLVDQHTKLYETTLDLLASV 64

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGT 128
             L+ +L+ED   +++E     + ++ + +Y  FE   LLSG  D ++A LE+H GAGGT
Sbjct: 65  TELQSSLDEDMKELVEE-----EYVQYDQDYALFEVRVLLSGPYDDHNAILEIHPGAGGT 119

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+ DWA ML RMYTR+AE++ +  + L+   GEEAG+KS ++ + G  AYG+LK E GVH
Sbjct: 120 EAMDWAGMLYRMYTRFAERKGYHLDVLDYQPGEEAGVKSVSMRVSGNMAYGYLKAENGVH 179

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DSN+RRHTSF+S+ + P  +D +EIEI + D  + T R+SGAGGQH+N TDS
Sbjct: 180 RLVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIEDKDLDVITMRSSGAGGQHINKTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN--IGESSKTEI 306
           AVR+TH PTG+ V  Q +RSQ +N+    NML++KL +L+++++E+ A+   GE    E 
Sbjct: 240 AVRMTHKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIREQEQRASEIKGEVKANE- 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV  PY MVKDLRT  E  +   V+DGD++ F+ + L
Sbjct: 299 -WGSQIRSYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYL 342


>gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 367

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 216/336 (64%), Gaps = 5/336 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q +  L+ +  +P LW +  +A+ +  +  H  + +  I E+Q RL D  +L+E+A  +D
Sbjct: 31  QEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQRRLDDLDVLVEMA--KD 88

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    +E    L  I   ++  + ++LL+GE D   A + + AGAGG ++ D+A ML+RM
Sbjct: 89  DEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTIRAGAGGVDAADFAEMLMRM 148

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+  +    L+    EEAGIKSAT  I  P A+G L  E G HRLVR+SP++S  
Sbjct: 149 YLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLSVEAGTHRLVRMSPFNSAG 208

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +R TSF+++ V P+++ +  IEI E+D R+D +R+SG GGQ VNTTDSAVRITH+PTG+V
Sbjct: 209 KRQTSFAAVEVVPLIEQTESIEIPENDMRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 268

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQP 319
           V CQ E+SQ +N+A A  +L+++L  L +Q+ +E A   E +      WG Q+RSYVL P
Sbjct: 269 VTCQNEKSQIQNRAAALRVLQSRL--LLVQREQEAATKKELAGNITASWGDQMRSYVLAP 326

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           YQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 327 YQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362


>gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
 gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 288

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/282 (50%), Positives = 200/282 (70%), Gaps = 6/282 (2%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLEL   EDD ++L E    L++++ E++  + + LLSG  D+  A L ++AGAGGT++Q
Sbjct: 3   LLEL---EDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQ 59

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMYTRW+EK+ +K    EI +G+EAG+KS TL I+G  AYG+LK E+G HRLV
Sbjct: 60  DWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLV 119

Query: 192 RISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           RISP+++N +R TSF+ + V P++ +++I ++I + D  I T RA G GGQ+VN  ++AV
Sbjct: 120 RISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAV 179

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWG 309
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL   LE Q+ + IA I      E  WG
Sbjct: 180 RIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEI-RGDMVEAAWG 238

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+YV  PYQ+VKDLRTN+E T    V+DG+L DF++A L
Sbjct: 239 TQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYL 280


>gi|325963891|ref|YP_004241797.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 371

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 211/326 (64%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ +  +P LW +   A+ +     H  + +  +  +  R+ D  +L+EL  +EDD + +
Sbjct: 36  LSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNLASRIDDLEVLVELGQDEDDAASM 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E +  L+ IK  ++  +  +LLSGE D  +A + + AGAGG ++ D+A ML+RMY RWA
Sbjct: 96  GEAAAELESIKKALKELEVVTLLSGEYDEREAVVSIRAGAGGVDAADFAEMLMRMYLRWA 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  + T  ++    EEAG+KSAT  +K P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+++ +  IEI +++ R+D +R+SG GGQ VNTTDSAVR+THIPTG VV  Q 
Sbjct: 216 FAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHIPTGTVVSMQN 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           E+SQ +N+A A  +L+++L  L+ +++E+      +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 EKSQLQNRAAAMRVLQSRLLLLK-KEQEDAEKKALAGDVKASWGDQMRSYVLNPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E  + S V DG++DDF+ A +
Sbjct: 335 LRTEHEVGNTSAVFDGEIDDFIDAGI 360


>gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
 gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
          Length = 356

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 14/354 (3%)

Query: 7   LNCLGGLF----DWDNAVQRLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +N     F    D+D + + L    L T + +P  WQ+   A+  M++           +
Sbjct: 1   MNLRAAFFLTWCDFDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWR 60

Query: 61  EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++ R+ D   L ELA L  +D S+  E    +  +  E++  +     SG+ D+ +A L
Sbjct: 61  GLERRIND---LTELAVLSREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALL 117

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            VHAGAGG ESQDWA MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG
Sbjct: 118 TVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYG 177

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E GVHRL+R+SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG G
Sbjct: 178 FLKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPG 237

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI 298
           GQ+V    +AVR+THIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR EE A +
Sbjct: 238 GQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKL 297

Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            GE    E  WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L
Sbjct: 298 KGERISAE--WGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYL 349


>gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
 gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
          Length = 356

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/334 (45%), Positives = 210/334 (62%), Gaps = 9/334 (2%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           LN + +D       P  W +   A+  MR    +   +S +   +  + D    LEL   
Sbjct: 11  LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDAQATLELYEL 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           + D  +LQE  + L +++  ++  + E LLSGE D   A L ++AGAGGT++QDWA MLL
Sbjct: 71  DPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRLVRISP+++
Sbjct: 131 RMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AVRI HIPTG
Sbjct: 191 NDKRQTSFAGVEVMPKIEEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C QERSQ +NK +A  +L AKL  +  ++R  EIA+I      E  WG QIR+YV 
Sbjct: 251 LFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QPYQMVKDLRTN E      V+DG LD F+ A L
Sbjct: 310 QPYQMVKDLRTNEETNDVQAVMDGALDPFIDACL 343


>gi|83814103|ref|YP_445897.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
 gi|83755497|gb|ABC43610.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
          Length = 378

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 153/357 (42%), Positives = 226/357 (63%), Gaps = 8/357 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  LGG  D D     +  LN +  DP  W +   A+ + +     +  I   ++
Sbjct: 11  QLAERVEALGGYLDVDGRRMTVEELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWED 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++  +++  L+L  EE+   +  E     ++++ +++  + ESLL    D  DA +E+
Sbjct: 71  VKEQ-AEDIETLQLLSEEEGEDMSDEIDAEARKLEQKLDRLELESLLDDPDDERDAIVEI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + GAGGTESQDWA MLLRMY RWAE + +  E +    GEEAGIKSATL ++G +AYG L
Sbjct: 130 NPGAGGTESQDWAEMLLRMYMRWAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D++SRRHTSF+S++VYP VDDSI +++SE +  + T+R+ G GGQ
Sbjct: 190 KSETGVHRLVRISPFDADSRRHTSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQ 249

Query: 242 HVNTTDSAVRITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           HVN  ++ VR+           T V   C QERSQH+N+ +A  ML++++Y+ E + +EE
Sbjct: 250 HVNKVETGVRLIWTGTLSNGEETTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEE 309

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                ESSK  I WG QIRSYVL PY+MV D RT+ ++     VL+G+LD F+KA L
Sbjct: 310 EKERLESSKKSIEWGSQIRSYVLHPYKMVNDHRTDTKRNDAEAVLEGELDPFIKAYL 366


>gi|119952877|ref|YP_945086.1| peptide chain release factor 2 [Borrelia turicatae 91E135]
 gi|119861648|gb|AAX17416.1| bacterial peptide chain release factor 2 [Borrelia turicatae
           91E135]
          Length = 353

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/356 (42%), Positives = 225/356 (63%), Gaps = 8/356 (2%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M    +L   GG FD +    +L     +  D + W +  +A+ +++ +  L   I   +
Sbjct: 1   MNFWNKLKMSGGSFDSNKIKVKLKEYEKQINDENFWNDNKKAQEILKNQNILKAKIEPWE 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAY 118
           ++  +L D   L E+A  E+D ++L +  +     KL  +YK   +L     + D N+A+
Sbjct: 61  DLICKLKDLRELCEIAESEEDTALLDQDIN-----KLREQYKHLLTLSYFKEDIDINNAF 115

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L +H+GAGGTE+ DW +ML R+Y R++E+  +KTE +++ + E  GIKS T+ IKG  AY
Sbjct: 116 LTIHSGAGGTEACDWVSMLYRIYLRYSERHGYKTELIDLLEAE-GGIKSVTIEIKGEYAY 174

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E G+HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGA
Sbjct: 175 GFLKSEVGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEITIKPEDIRVDTYRASGA 234

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +  
Sbjct: 235 GGQHVNKTSSAVRITHLQTGIVTQSQTDRSQHRNKDLAMRVLKSKLYEHYKILEQQKSKS 294

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  K +I WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 295 KQEEKKDISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350


>gi|89890713|ref|ZP_01202222.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
 gi|89516858|gb|EAS19516.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
          Length = 386

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 215/329 (65%), Gaps = 2/329 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++ L  KT  P  W +   A+++M+E ++     +          D  +L E   +E D 
Sbjct: 48  ITNLEEKTFSPDFWNDAKAAELIMKELRNKKQWTTDYATATTLAEDTEVLYEF-FKEGDA 106

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S  +  +     + +  E  +F+++LS E D   A L++ AGAGGTES DWA ML+RMY 
Sbjct: 107 SEDEVMAKYNAAVDI-TEKLEFKNMLSNEGDDMSAVLQITAGAGGTESCDWAEMLMRMYM 165

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            WA+K  +K + L    G+ AGIK+ TL I+G  ++GWLKGE GVHRLVRISP+DSN++R
Sbjct: 166 MWAQKNNYKVKELNFQAGDVAGIKTVTLEIEGDYSFGWLKGENGVHRLVRISPFDSNAKR 225

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S++VYP+ DD+IEI+I+ +D + D  R+SGAGGQ+VN  ++   +TH P+G+V+ 
Sbjct: 226 HTSFASVYVYPLADDTIEIDINPADIKWDFARSSGAGGQNVNKVETKAILTHHPSGIVIH 285

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
             + RSQ +N+ +A  ML+++L+E+ELQKR    +  ES K +I WG QIR+YV+ PY++
Sbjct: 286 NSETRSQLENREKAMQMLKSQLFEIELQKRNAARDEIESGKMKIEWGSQIRNYVMHPYKL 345

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD+RT  E  +   V++GD+D F+KA L
Sbjct: 346 VKDVRTAHETGNVDAVMNGDIDAFLKAFL 374


>gi|224543374|ref|ZP_03683913.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523701|gb|EEF92806.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
          Length = 371

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/337 (45%), Positives = 206/337 (61%), Gaps = 22/337 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--DDCS 83
           L  +T D H W +          + H     + + E++ ++ D    LE + +E  +   
Sbjct: 36  LTVQTMDEHFWDD----------QAHATKVYAHLNEMK-KVADTDASLEASYKELMEVYE 84

Query: 84  ILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWA 134
            +++T D      LE +Y  F           L   E D ++A +E+H GAGGTESQDWA
Sbjct: 85  YVKDTEDPDFMASLEEDYMTFHKNLDEFEKTLLFDQEYDHSNAIVEIHPGAGGTESQDWA 144

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMY R+ EK+ +K +  +   G+EAG+KS ++   G NAYG L+ E+GVHRLVRIS
Sbjct: 145 EMLMRMYIRYGEKKGWKVDVDDYLAGDEAGLKSCSIRFTGYNAYGHLRAEKGVHRLVRIS 204

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+ RRHTSF+S+ V P +DD IEI I   + RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 205 PFDSSKRRHTSFASVEVSPELDDDIEITIDPKNLRIDTYRASGAGGQHINKTDSAVRITH 264

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPT  VV CQ +RSQ +N+ QA  ML++KLY L  ++  E  +  +  K  I WG QIRS
Sbjct: 265 IPTNTVVSCQSQRSQLQNREQAMLMLKSKLYLLMQEEHAEKLSEIQGEKKNIEWGSQIRS 324

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL PY MVKD R+  E      +LDG+LDD + A L
Sbjct: 325 YVLHPYSMVKDNRSGYESNDQKKILDGELDDLIYAYL 361


>gi|169838345|ref|ZP_02871533.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7a]
          Length = 243

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/241 (59%), Positives = 183/241 (75%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+A L +++GAGGTE+ DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IKG
Sbjct: 2   NNAILTINSGAGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYG+LKGE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D ++I+I   D ++DTYR
Sbjct: 62  NYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVKIDIRPEDLKVDTYR 121

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVNTTDSAVRITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE+
Sbjct: 122 ASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREK 181

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                + ++++I WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   
Sbjct: 182 EMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYA 241

Query: 355 K 355
           K
Sbjct: 242 K 242


>gi|88856358|ref|ZP_01131017.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
 gi|88814442|gb|EAR24305.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
          Length = 368

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/347 (42%), Positives = 213/347 (61%), Gaps = 9/347 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D D     ++ L+     P LW +  +A+ +  +  H    ++ I  I +RL D  I+
Sbjct: 23  VVDTDRLTSEIARLSEAAGAPDLWDDTDKAQKVTSDLSHRQAELAKINSISNRLDDLEIM 82

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++LA EE D     +    L  IK  +   + ++LL+GE D   A + + AGAGG ++ D
Sbjct: 83  VQLANEESDAQAGADARAELTGIKKTLGDLEVQTLLNGEFDQRPAVITIRAGAGGVDAAD 142

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A MLLRMY R+AE+  + T  L+    EEAGIKSAT  +  P A+G L  E G HRLVR
Sbjct: 143 FAEMLLRMYLRYAEQHSYPTRVLDTSYAEEAGIKSATFEVDAPFAFGTLSVEAGTHRLVR 202

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +SP++S  +R TSF+++ V P+++ +  +E+ E+D R+D +R+SG GGQ VNTTDSAVRI
Sbjct: 203 MSPFNSAGKRQTSFAAVEVVPLIETTDVVEVPENDIRVDVFRSSGPGGQSVNTTDSAVRI 262

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNM----LRAKLYELELQKREEIANIGESSKTEIGW 308
           TH+PTG+VV CQ E+SQ +N+A A  +    L     E E   ++EIA +  +S     W
Sbjct: 263 THLPTGIVVSCQNEKSQIQNRAAAMRVLQSRLLLLQREQEAATKKEIAGVITAS-----W 317

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G Q+RSYVL PYQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 318 GDQMRSYVLAPYQMVKDLRTEFEVNNPSNVFDGDLDGFISAGIKWRK 364


>gi|332287121|ref|YP_004422022.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|325506910|gb|ADZ18548.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|328914361|gb|AEB55194.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
          Length = 294

 Score =  283 bits (725), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/249 (57%), Positives = 185/249 (74%), Gaps = 1/249 (0%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + LLSGE D N  +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AG
Sbjct: 40  QRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAG 99

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK  T+   G  AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I 
Sbjct: 100 IKHVTVKFSGDYAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIR 159

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++
Sbjct: 160 PNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARM 219

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-L 343
           Y+  LQ+R E   I   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ L
Sbjct: 220 YQQILQERLEKQLIDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELL 279

Query: 344 DDFMKATLA 352
           DDF+KA LA
Sbjct: 280 DDFVKAYLA 288


>gi|256424469|ref|YP_003125122.1| peptide chain release factor 2 [Chitinophaga pinensis DSM 2588]
 gi|256039377|gb|ACU62921.1| bacterial peptide chain release factor 2 (bRF- 2) [Chitinophaga
           pinensis DSM 2588]
          Length = 362

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 149/355 (41%), Positives = 229/355 (64%), Gaps = 12/355 (3%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L+ LGG  D  + + ++      T  P  W +   A  +++E +     +   + +Q  
Sbjct: 12  RLHVLGGFLDVQDRIAKIENDKQLTLAPGFWDDNARATSILKEIKVNKFWVDLYENVQTS 71

Query: 66  LCDNLILLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + D+ +LL+      A EE+        ++ L  +       +F+S L+   D   A L 
Sbjct: 72  IEDSAVLLDFQKEGEASEEEVAQAYHAATEALDEL-------EFKSTLNEPEDEMPAVLT 124

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +++GAGGTESQDWA MLLRMY  + EK+ +K   +++  G+ AGIKSA+L + G  AYG 
Sbjct: 125 INSGAGGTESQDWAEMLLRMYRMYGEKQGWKVSEIDVQYGDGAGIKSASLEMDGSFAYGL 184

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+D+N+RRHTSF+SI+VYP+VDD+IEI ++ +D   + YR+ G GG
Sbjct: 185 LKAESGVHRLVRISPFDANARRHTSFASIFVYPLVDDTIEIAVNPADLVWEFYRSGGKGG 244

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVR+ H+P+G++++CQQ R+Q +N+ +A  ML+++LYE EL+KREE+ N   
Sbjct: 245 QNVNKVETAVRLKHVPSGIIIECQQARTQGENREKALTMLKSRLYEEELRKREELKNAAN 304

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++K +I WG QIRSYV  PY+M+KD RT+ E  +   V+DG+L+ F+KA L + K
Sbjct: 305 ANKRKIEWGSQIRSYVFHPYKMIKDHRTDYEVGNVQPVMDGELEGFIKAYLMMSK 359


>gi|300361282|ref|ZP_07057459.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
 gi|300353901|gb|EFJ69772.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
          Length = 270

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 137/245 (55%), Positives = 180/245 (73%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A     K E  +   GEEAG+K
Sbjct: 16  LLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHDLKFEIEDYEPGEEAGVK 75

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D SIE++I+  
Sbjct: 76  SVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDQSIEVDINPD 135

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A NMLRAKL++
Sbjct: 136 DLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRETAMNMLRAKLFQ 195

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE +K+++     + ++ EIG+G QIRSYV  PY MVKD RTN E +  + V+DG LD+F
Sbjct: 196 LEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFETSDVNGVMDGKLDNF 255

Query: 347 MKATL 351
           + A L
Sbjct: 256 IYAYL 260


>gi|298244286|ref|ZP_06968092.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
 gi|297551767|gb|EFH85632.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
          Length = 337

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/322 (43%), Positives = 214/322 (66%), Gaps = 6/322 (1%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL---EEDDCSILQETS 89
           P  W +  +A+  M++   L   ++  +++  +L D   L ELAL   EE D  +  E +
Sbjct: 3   PDFWSDNRKAQAHMQQLNALREEVTTWEQLATQLKD---LQELALMLEEEPDDDMQAEVA 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++  I+ ++E  +F  +LSGE D  +A L +HAG+GG ++QDWA MLLRMY RWA++ +
Sbjct: 60  QSIHPIEEQIEKLEFALMLSGEHDEKNAILSIHAGSGGVDAQDWAEMLLRMYLRWADQHR 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+T+  +  +GEEAGIKSAT+ I+G  AYG+L+ E G HRL+R+SP+D+  RR TSF+ +
Sbjct: 120 FRTQIYDYSEGEEAGIKSATVEIEGRFAYGYLRSEAGTHRLIRLSPFDAAHRRQTSFAKV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P ++++IEI I   D  +DTYR++GAGGQHVN TDSAVR+ H+P+G+VV CQ ERSQ
Sbjct: 180 ELMPDIENTIEISIRPEDIEVDTYRSTGAGGQHVNKTDSAVRMRHVPSGIVVTCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  +L+A+L+ELE +K +E A   +    +  +G QIRS ++ PY + KD RTN
Sbjct: 240 LQNREVALKILKARLFELEQKKHDEEAARLKGEHVQADFGTQIRSVIVHPYNIAKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E +  +  L G++D F+ A L
Sbjct: 300 HETSDTTAYLAGNVDPFIHAYL 321


>gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018]
 gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
 gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
          Length = 380

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 144/327 (44%), Positives = 209/327 (63%), Gaps = 3/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  +P LW +   A+ +  +     + +  ++ ++ R+ D   L+EL  EE+D   +
Sbjct: 36  LEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAVEQRIEDTKTLIELGQEEEDADSM 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  I  E++  + ++LL GE D+  A + + +GAGG ++ D+A MLLRMY RWA
Sbjct: 96  SEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIRSGAGGVDAADFAQMLLRMYLRWA 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  +KT+ ++    EEAGIKSAT  +  P AYG L  E G HR+VRISP+D+  RR T 
Sbjct: 156 ERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTG 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ VNTT SAVRITH+PTG+VV  Q 
Sbjct: 216 FSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQD 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ +N+A A  +L+++L  L L+  EE A   E +   +  WG Q+RSYVL PYQMVK
Sbjct: 276 ERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKASWGDQMRSYVLHPYQMVK 333

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           DLRT  E +    V DGD+D F++A +
Sbjct: 334 DLRTGYETSQTQAVFDGDIDGFIEAGI 360


>gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD]
 gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD]
          Length = 378

 Score =  283 bits (723), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 146/339 (43%), Positives = 213/339 (62%), Gaps = 3/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ ++ R+ D   L+
Sbjct: 24  LDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQRIEDTKTLI 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + +GAGG ++ D+
Sbjct: 84  ELGEEEGDADSMNEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVDAADF 143

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L  E G HR+VRI
Sbjct: 144 AQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVRI 203

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ VNTT SAVRIT
Sbjct: 204 SPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRIT 263

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQI 312
           H+PTG+VV  Q ERSQ +N+A A  +L+++L  L L+  EE A   E +   +  WG Q+
Sbjct: 264 HLPTGLVVSMQDERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKASWGDQM 321

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 322 RSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGI 360


>gi|15842676|ref|NP_337713.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
 gi|13882995|gb|AAK47527.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
          Length = 371

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 156/348 (44%), Positives = 217/348 (62%), Gaps = 4/348 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E++ RL
Sbjct: 16  LTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRL 75

Query: 67  CDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +L ELA EE   +     ++    L+ ++ ++E  +  +LLSGE D  +A + + +
Sbjct: 76  DDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRS 135

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L  
Sbjct: 136 GAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSV 195

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ V
Sbjct: 196 EQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSV 255

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL E    +     +  ++  
Sbjct: 256 NTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERXRLEERAELDALKADG 315

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +
Sbjct: 316 GS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGI 362


>gi|161507200|ref|YP_001577154.1| peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|160348189|gb|ABX26863.1| Peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|328461868|gb|EGF34090.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463]
          Length = 332

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 155/315 (49%), Positives = 204/315 (64%), Gaps = 6/315 (1%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
           Q +I    L++E++      SF+K  QD   D L  LEL   E D  + QE   +L+ ++
Sbjct: 14  QKLISDNNLLKEKRD-----SFLKLQQD-YEDELTALELLRAEPDADLQQEVETDLKDLQ 67

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                 + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   FK E  +
Sbjct: 68  EAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAGFKFEIND 127

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
              GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+ V P +D
Sbjct: 128 YEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEVIPEID 187

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           DSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A
Sbjct: 188 DSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQNRETA 247

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
            N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT  E    +
Sbjct: 248 MNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYETADVN 307

Query: 337 DVLDGDLDDFMKATL 351
            V+DG L  F+ + L
Sbjct: 308 GVMDGKLQPFIYSYL 322


>gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
 gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
          Length = 378

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 146/339 (43%), Positives = 212/339 (62%), Gaps = 3/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ +  R+ D   L+
Sbjct: 24  LDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDTKTLI 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + +GAGG ++ D+
Sbjct: 84  ELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVDAADF 143

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L  E G HR+VRI
Sbjct: 144 AQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVRI 203

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ VNTT SAVRIT
Sbjct: 204 SPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRIT 263

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQI 312
           H+PTG+VV  Q ERSQ +N+A A  +L+++L  L L+  EE A   E +   +  WG Q+
Sbjct: 264 HLPTGLVVSMQDERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKASWGDQM 321

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 322 RSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGI 360


>gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
 gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
          Length = 357

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 151/349 (43%), Positives = 217/349 (62%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  +  + D D    +++ L  +   P+LW +   A+ +  +  H    +  + ++
Sbjct: 4   LTGKLTQIESVMDLDALRAQVADLEQQASSPNLWDDPEAAQKVTSQLSHRQGELRRVSDL 63

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA  E D   + E    L  +   ++  +  +LLSGE D  +A + + 
Sbjct: 64  RQRLDDLGVLYELAEAEGDSGSMAEAEAELTDLGKAIDGLEVRTLLSGEYDDRNAVVTIR 123

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  +I   EEAGIKSAT  +  P  YG L 
Sbjct: 124 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVYDISYAEEAGIKSATFKVSAPYVYGTLS 183

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V P V++   ++++E D R+D YR+SG GGQ 
Sbjct: 184 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDVAEKDIRVDVYRSSGPGGQS 243

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L+A+L  +  +K EE A +    
Sbjct: 244 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQARL--MLRKKEEERAEMDALR 301

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                WG Q+RSYVL PYQMVKDLRT+ E  +P+ VLDGD+D F+ A +
Sbjct: 302 DGGSSWGNQMRSYVLHPYQMVKDLRTDYEVGNPTAVLDGDIDGFLDAGI 350


>gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
 gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
          Length = 371

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 161/351 (45%), Positives = 207/351 (58%), Gaps = 7/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L+ +      D   + ++ L   +     W +   A+  M     L + ++ I   
Sbjct: 12  LTARLDEVESYLHIDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGIDAA 71

Query: 63  QDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             +L D    LEL  E +D  +L E+   +D+L R   E+E     S  + E D  DA +
Sbjct: 72  HAKLEDAKAALELGSETEDAGLLAESEHLADSLARDLSELE---LSSWFTDELDHGDAIV 128

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            V  G GG E+QDWA+ML  MY R+A +R +  +  E    E  GI  AT  + G NAYG
Sbjct: 129 TVKPGQGGLEAQDWADMLFHMYLRYAARRGWSVDIAEATPAEVIGIDRATFTVSGKNAYG 188

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ EQGVHRLVRISP D   RR TSF+ + V PV+   IE++I  SD RID Y ASG G
Sbjct: 189 MLRAEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPAEIEVDIDPSDLRIDVYHASGPG 248

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITHIPTGVVV CQ ERSQ +NKA A N+LR++LYE+E +KRE   +  
Sbjct: 249 GQGVNTTDSAVRITHIPTGVVVTCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDEL 308

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKA 349
              K EI +G QIRSYVL PYQ+VKDLRT  E  +   VL DGDLD F+ A
Sbjct: 309 RGPKHEISFGNQIRSYVLYPYQLVKDLRTGEETGNVDAVLDDGDLDPFIIA 359


>gi|302334951|ref|YP_003800158.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
 gi|301318791|gb|ADK67278.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
          Length = 370

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 155/346 (44%), Positives = 206/346 (59%), Gaps = 1/346 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R+L+ +      D   + ++ L  ++  P  W +   A   M E       +  I++ 
Sbjct: 11  LARRLDEVESYLHIDERRRVVAELEERSARPGFWDDADAASRSMTELTRAKEDVQGIEDA 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D    LEL LE  D  +L E +     ++ E+   +  S  + + D  DA + V 
Sbjct: 71  RTRLGDASAALELGLETGDGDLLDEAARICGALEDELGELELSSWFADDLDHGDAIVTVT 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+QDW +ML +MY R+ ++R +K    +    E  GI  AT  + G NAYG L+
Sbjct: 131 PGQGGLEAQDWCDMLFKMYLRYCDRRGWKVTVNDAPAAEAIGIDRATFTVSGKNAYGMLR 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP D   RR T+F+ + V PV+ D +E++I   D RID Y ASG GGQ 
Sbjct: 191 AEQGVHRLVRISPTDDKKRRQTTFAGVEVLPVLPDDVEVDIDPGDLRIDVYHASGHGGQG 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG VV CQ ERSQ +NKA A  +LR++LYELEL KRE   +     
Sbjct: 251 VNTTDSAVRITHLPTGTVVTCQNERSQIQNKAIAMGILRSRLYELELAKREAEIDELRGP 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
           K EIG+G QIRSYVL PYQ+VKDLRT +E  +   VL DGDLD F+
Sbjct: 311 KHEIGFGNQIRSYVLYPYQLVKDLRTGVETGNVESVLDDGDLDKFI 356


>gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101]
          Length = 356

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 147/340 (43%), Positives = 215/340 (63%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      R   L      P  W +  +A+  MR+   +   +  + + Q  + D    
Sbjct: 5   VFDVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAEAT 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +E+   E D  +L E+++ LQ+++ +++  + E LLSG  D   A + ++AGAGGT++QD
Sbjct: 65  VEIYGLEPDEELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRLVR
Sbjct: 125 WALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +++ ++++I + D  I T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R  EIA+I      E  WG Q
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRT  E T    V+DGDLD F+++ L
Sbjct: 304 IRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|91202802|emb|CAJ72441.1| strong similarity to protein chain release factor 2 (RF-2)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 316

 Score =  282 bits (722), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 143/293 (48%), Positives = 204/293 (69%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++E+Q    +   L++L  EE D     E   ++     ++E  +  ++L    D  +AY
Sbjct: 3   LQELQKTYEEIEFLVDLMDEESDERTTAEIVGDIALFTQKLEKLELHTMLGEAHDHCNAY 62

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L ++AGAGGTES DW +ML RMY+RWAEK       ++   GEEAG+K  T+LI+G   Y
Sbjct: 63  LSIYAGAGGTESCDWVSMLFRMYSRWAEKNGHTLSLIDSLAGEEAGLKRITVLIEGEYVY 122

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G LK E GVHRLVRISP+DSN+RRHTSF+++ V P +++  EIEI++++ ++DTYR+SGA
Sbjct: 123 GHLKSEIGVHRLVRISPFDSNARRHTSFAAVDVLPEIEEEEEIEINDNELQVDTYRSSGA 182

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SAVRITH+PTG+V+ CQ ERSQH+N+ +A NML+AK+Y+++ +++E   + 
Sbjct: 183 GGQHVNKTSSAVRITHLPTGIVIACQSERSQHQNRRRAINMLKAKIYQIKEKEKERELSA 242

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               K EI WG QIRSYVLQPY +VKDLRT  E  +   +LDG+++ F++A L
Sbjct: 243 AYDEKGEIAWGNQIRSYVLQPYSLVKDLRTGKESGNTQAMLDGEIEGFIEAYL 295


>gi|58336996|ref|YP_193581.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227903556|ref|ZP_04021361.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
 gi|58254313|gb|AAV42550.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227868443|gb|EEJ75864.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
          Length = 332

 Score =  282 bits (722), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 156/320 (48%), Positives = 204/320 (63%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           P  W N  +A+ L+ E   L +   SF+K  +D   + L  L+L  EE D  +  E   +
Sbjct: 4   PDFWDNQEKAQKLISENNVLKEKRDSFLKLSED-YENELTALDLLREEPDSDLQTEVETD 62

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  ++      + + LLSG+ DS++A  E+H GAGGTE+ DW  MLLRMY R+ +   FK
Sbjct: 63  LIALQEAFHNYELDLLLSGKYDSHNALFEIHPGAGGTEAMDWGQMLLRMYQRYCDTAGFK 122

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E  +   GEEAG+KS T  + G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V
Sbjct: 123 FEINDYEPGEEAGVKSVTARVVGHNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +
Sbjct: 183 IPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQIQ 242

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT  E
Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYE 302

Query: 332 KTSPSDVLDGDLDDFMKATL 351
               + V+DG L  F+ + L
Sbjct: 303 TADTTGVMDGKLQPFIYSYL 322


>gi|317507095|ref|ZP_07964856.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316254589|gb|EFV13898.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 372

 Score =  282 bits (722), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 157/356 (44%), Positives = 216/356 (60%), Gaps = 12/356 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L+ +    D       ++ L ++  DP LW++    + +          +  +  +
Sbjct: 12  LSATLSTVESALDLSKLEAEIADLESQAADPSLWEDQDRGQEVTSGLARRQATLRAVTAL 71

Query: 63  QDRLCDNLILLELALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           + RL D  +L ELA  EDD        L E     + ++ ++E  +  +LL+GE D  +A
Sbjct: 72  RSRLDDLHVLYELA--EDDSGAEGQEALAEADAERKALREDIETLEVRTLLNGEYDEREA 129

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + +GAGG ++ DWA ML+RMY RWAE+ K   E  +I   EEAGIKSAT  +K   A
Sbjct: 130 LVTIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEIYDISYAEEAGIKSATFAVKSAYA 189

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV  +  IEI ES+ R+D YR+SG
Sbjct: 190 YGTLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIEIPESEVRVDVYRSSG 249

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVR+TH+PTGVVV CQ E+SQ +NK  A  +L+AKL E   Q+ +E  N
Sbjct: 250 PGGQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKLSAMRVLQAKLLERRRQEEQEQLN 309

Query: 298 I--GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              G+   +   WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F+++ +
Sbjct: 310 ALKGDGGSS---WGTQMRSYVLAPYQMVKDLRTEYEVGNPTTVLDGDIDGFLESGI 362


>gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
 gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
          Length = 289

 Score =  282 bits (722), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 140/281 (49%), Positives = 194/281 (69%), Gaps = 5/281 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LEL   E D ++LQE    + ++  +++  + + LLSG  D+  A L + AGAGGT++Q
Sbjct: 1   MLEL---ETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTISAGAGGTDAQ 57

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML+RMYTRW E   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 58  DWAFMLMRMYTRWGEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRSEMGTHRLV 117

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D+S+++EI + D  I T R+ G GGQ+VN  ++AVR
Sbjct: 118 RISPFNANGKRQTSFAGVEVMPQIDNSVQLEIPDKDLEITTTRSGGKGGQNVNKVETAVR 177

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           I HIPTG+ V+C +ERSQ +NK +A N L+AKL  +  ++R +EIA I      E  WG 
Sbjct: 178 IVHIPTGLAVRCTEERSQLQNKEKALNRLKAKLLVIAKEQRAQEIAEI-RGDMVEASWGN 236

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRTN E T+  DV++G+LD F++A L
Sbjct: 237 QIRNYVFHPYQMVKDLRTNTETTAIGDVMNGELDPFIQAYL 277


>gi|298208407|ref|YP_003716586.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
 gi|83848330|gb|EAP86199.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
          Length = 316

 Score =  282 bits (722), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 133/253 (52%), Positives = 190/253 (75%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  +F+++LS E D   A L++ AGAGGTES DWA ML+RMY  WAEKR FK + L + 
Sbjct: 52  IEDLEFKNMLSEEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWAEKRGFKIKELNLQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+ AGIK+ +L I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDS
Sbjct: 112 NGDVAGIKTVSLEIEGNFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDS 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IEI+I+ +D   D  R+SGAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  
Sbjct: 172 IEIDINPADISWDFARSSGAGGQNVNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQ 231

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           ML+++LYE+EL+K++   +  ESSK +I WG QIR+YV+ PY++VKD+RT  E  +   V
Sbjct: 232 MLKSQLYEIELRKQQAQRDEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAV 291

Query: 339 LDGDLDDFMKATL 351
           ++GD+D F+KA L
Sbjct: 292 MNGDIDAFLKAFL 304


>gi|148272488|ref|YP_001222049.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830418|emb|CAN01353.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 367

 Score =  282 bits (721), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 148/336 (44%), Positives = 216/336 (64%), Gaps = 5/336 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q +  L+ +  +P LW +  +A+ +  +  H  + +  I E+Q RL D  +L+E+A  +D
Sbjct: 31  QEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQRRLDDLDVLVEMA--KD 88

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    +E    L  I   ++  + ++LL+GE D   A + + AGAGG ++ D+A ML+RM
Sbjct: 89  DEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTIRAGAGGVDAADFAEMLMRM 148

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE+  +    L+    EEAGIKSAT  I  P A+G L  E G HRLVR+SP++S  
Sbjct: 149 YLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLSVEAGTHRLVRMSPFNSAG 208

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +R TSF+++ V P+++ +  IEI E++ R+D +R+SG GGQ VNTTDSAVRITH+PTG+V
Sbjct: 209 KRQTSFAAVEVVPLIEQTESIEIPENEMRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 268

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQP 319
           V CQ E+SQ +N+A A  +L+++L  L +Q+ +E A   E +      WG Q+RSYVL P
Sbjct: 269 VTCQNEKSQIQNRAAALRVLQSRL--LLVQREQEAATKKELAGNITASWGDQMRSYVLAP 326

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           YQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 327 YQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362


>gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1]
 gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1]
          Length = 378

 Score =  282 bits (721), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 146/345 (42%), Positives = 214/345 (62%), Gaps = 3/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + +    D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ +  R+ 
Sbjct: 18  SSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIE 77

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L+EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + +GAGG
Sbjct: 78  DTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L  E G 
Sbjct: 138 VDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGT 197

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ VNTT 
Sbjct: 198 HRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTY 257

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEI 306
           SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L L+  EE A   E +   + 
Sbjct: 258 SAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKA 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 316 SWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGI 360


>gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
 gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
          Length = 382

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 148/351 (42%), Positives = 220/351 (62%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D      +++ L+ +   P+LW +   A+ +          +  + +
Sbjct: 24  ELRTTLESIQAVSDPTALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAK 83

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D   L+EL +E +D   L E    L  I+ ++   +  +LL+GE D  +A + +
Sbjct: 84  LGGRIDDLETLVELGVEMEDEDSLAEAEVELTGIRKDLGELEVRTLLNGEYDQREAVVTI 143

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 144 RSGAGGVDAADFAEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHL 203

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ
Sbjct: 204 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPESEIKVDVFRSSGPGGQ 263

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++K EE A   E 
Sbjct: 264 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLVRKAEEDAKKKEL 321

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   +  WG Q+RSYVLQPYQMVKDLRT  E  +PS V DGD+DDF++A +
Sbjct: 322 AGDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGI 372


>gi|331089985|ref|ZP_08338875.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330402899|gb|EGG82465.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 332

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 224/322 (69%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W +   ++ +M+E + L +++  I+++     D ++L+E++ EED     +E  +
Sbjct: 2   EEPGFWDDPEVSQQVMKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            LQ+ +   E  +  +LL+G  D ++A + +HAGAGGTES DW  ML RMYTRWAEK+ +
Sbjct: 62  ELQQFEETFEELRIGTLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  +G+ AG+K  T  +KG NAYG+L+ E+GVHRLVRISP++S  +R TSF+S  
Sbjct: 122 SIEELDYLEGDVAGVKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ I+IEI++ D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQH
Sbjct: 182 VIPDIEEDIDIEINDDDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQH 241

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NK +A  ML++KLY ++ Q++ E  +       +I +G QIRSYV+QPY MVKD RTN 
Sbjct: 242 MNKDKAMQMLKSKLYLMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTNA 301

Query: 331 EKTSPSDVLDGDLDDFMKATLA 352
           E ++   V+DG++D F+ A L+
Sbjct: 302 EVSNVGGVMDGNIDPFINAYLS 323


>gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9211]
 gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9211]
          Length = 356

 Score =  281 bits (720), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 149/323 (46%), Positives = 209/323 (64%), Gaps = 8/323 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETS 89
           P  W +  +AK  MR    LD   + +K++ D    + D  + LEL   E D  +L E  
Sbjct: 25  PEFWNDQQKAKKEMR---RLDEVKAQLKKLVDWDAAIEDAQVSLELYELEPDDEMLAEAI 81

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +K +++  + E LLSG+ D     L ++AGAGGT++QDWA MLLRMYTRWA+   
Sbjct: 82  KGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTDAQDWAQMLLRMYTRWADDHG 141

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K    E+ +GEEAGIKSATL I G  AYG+L+ E+G HRLVRISP+++N +R TSF+ +
Sbjct: 142 MKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHRLVRISPFNANGKRQTSFAGV 201

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P +++ +E++I E D  I T R+ GAGGQ+VN  ++AVRI H+P+G+ V+C QERSQ
Sbjct: 202 EIMPKLEEEVELDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGLAVRCTQERSQ 261

Query: 270 HKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            +NK +A  +L+AKL  +  ++R  +IA+I      E  WG QIR+YV  PYQMVKDLRT
Sbjct: 262 LQNKEKAMALLKAKLMIIAQEQRASQIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRT 320

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
             E T    V++GDLD F++A L
Sbjct: 321 GKESTDVEGVMNGDLDPFIQALL 343


>gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1]
 gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1]
 gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
          Length = 337

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 146/323 (45%), Positives = 215/323 (66%), Gaps = 3/323 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   A+ ++ + + L   +S + E++    D   L E+A  ++D SI+ E    +
Sbjct: 4   PDFWNDSESAQKVVMQLKGLKGIVSPLNELESSAEDLEALFEMA--DEDESIVDEVRSEI 61

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            R+++ ++  + ++LL+G  DS  A + ++A  GGT++ DWA+MLLRMY+ WA  +++K 
Sbjct: 62  DRLEVVLDDLELKALLNGPNDSAGAIVTINARDGGTDANDWADMLLRMYSAWAVGQEYKI 121

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+  + EEAGI  A++ ++GP AYG+LKGE+G+HRLVRISP++S S+R TSF+++ V 
Sbjct: 122 ELLDRQENEEAGINHASIAVRGPMAYGYLKGEEGMHRLVRISPFNSESKRQTSFAAVSVS 181

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DDSIE+ + + D R DTYRASGAGGQHVN TDSA+R+THIPT  VVQCQ +RSQH+N
Sbjct: 182 PEIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQHQN 241

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  AW MLRAKL  +E ++RE        ++   G+G QIR+Y L P Q VKD RT    
Sbjct: 242 RDTAWKMLRAKLARIEEERREAEEAKKYETQARTGFGSQIRNYFLHPDQRVKDARTGHYV 301

Query: 333 TSPSDVLDG-DLDDFMKATLAIK 354
            + + VLDG +L  F  A L +K
Sbjct: 302 GNFNSVLDGSELQGFFDAFLRLK 324


>gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
 gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
          Length = 345

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 141/320 (44%), Positives = 211/320 (65%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W     A+  ++E       +  ++     L D+  +LEL   E D S+L E    +
Sbjct: 15  PDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELLDLEQDESLLLEAESTV 74

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            R+  E++  + + LLSG  D   A L ++AGAGGT++QDW+ MLLRMYTRW+E+  ++ 
Sbjct: 75  NRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQDWSEMLLRMYTRWSEQNGYQF 134

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           + +E  +G+EAG+KS T+ + G  AYG+LKGE+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 135 KLIEKSEGDEAGLKSVTMEVYGRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 194

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P++D  +E++I + D  I T R+ GAGGQ+VN  ++AVRITH+PT + V+C QERSQ +N
Sbjct: 195 PILDQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTSISVRCTQERSQLQN 254

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L +KL  +  ++R + IA+I      E  WG QIR+YV  PYQMVKDLRT++E
Sbjct: 255 KEKAMALLTSKLLVIAQEQRTQAIADI-RGDMVEAAWGNQIRNYVFHPYQMVKDLRTSVE 313

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            T+  DV++GDL+ F++A L
Sbjct: 314 TTAVDDVMNGDLEAFIQAYL 333


>gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa]
 gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa]
          Length = 379

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 147/336 (43%), Positives = 220/336 (65%), Gaps = 7/336 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L+ L +K  D  LW +  +A+  +     + + I  + E + ++ +   +++L  E D
Sbjct: 32  QELADLESKAADSSLWDDRAKAQETLLALTDVKDKIKLLAEFKTKVEEAETIVKLTEEMD 91

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D   L+E +  ++ +   ++  +   LLSG  D   A L + AGAGGT++QDWA+MLL
Sbjct: 92  STDAGFLEEATGIIKELNKALDKYELTQLLSGPYDKEGAVLSITAGAGGTDAQDWADMLL 151

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT+ +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP++S
Sbjct: 152 RMYVRWGEKQRYKTKVVESSPGEEAGIKSATVEVEGRYAYGYLSGEKGTHRIVRQSPFNS 211

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS + V P++ ++S+++E+ E D  I T RA G GGQ+VN  ++AVRITHIPT
Sbjct: 212 KGLRQTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGGQNVNKVETAVRITHIPT 271

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315
           GV V+C +ERSQ  NK +A + L+AKL  + E Q+  EI  I G++ K E  WG+QIR+Y
Sbjct: 272 GVTVRCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNY 329

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PY++VKD+RT  E +  + V+DG+LD F++A L
Sbjct: 330 VFHPYKLVKDVRTGHETSDIASVMDGELDPFIRAYL 365


>gi|261749632|ref|YP_003257318.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497725|gb|ACX84175.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 367

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 146/350 (41%), Positives = 229/350 (65%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++N L  + + D   + +     K  + + W+N  +AK   +    +   I    E+
Sbjct: 10  ISEKINKLQEVLNIDQIKESIEKEEKKISNQNFWKNCKKAKNFTKRLHAMKTCIKNFFEL 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +  IL  L+ EED   + +E    L + K  +   +F++LLS E D  +A L++ 
Sbjct: 70  KNALEELEILFSLSKEED---LEKEVKIQLNKTKNLLSNIEFKNLLSEEEDIFNAVLQIS 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DW +ML+RMY  WAEK KF  + +    G+  GIKS TL + G  A+G+LK
Sbjct: 127 SGAGGTESCDWTSMLMRMYIMWAEKNKFSVKNIHHIPGDITGIKSVTLELDGLYAFGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRL+R+SP+D+NS+RHTSFSS++VYP+VD  I+I I+ SD + +T+R+SG+GGQ+
Sbjct: 187 GENGVHRLIRLSPFDNNSKRHTSFSSVYVYPLVDKDIDININMSDIQWNTFRSSGSGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  +S VR+ H PTG++++  + RSQ +N+ +A ++L+++L+E+E+ K+ E  N  ESS
Sbjct: 247 VNKVESGVRLRHHPTGIIIENTETRSQMQNRQKALHLLKSRLFEIEISKKNEKKNKIESS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIR+Y++ PY++VKDLRT  E T    V++G++D F+K  L 
Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYETTQIHSVMNGEIDIFLKKFLV 356


>gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542]
 gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter
           keddieii DSM 10542]
          Length = 372

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 219/348 (62%), Gaps = 4/348 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D +    R++ L+ +   P LW +   A+ +          +  I  ++ R+
Sbjct: 17  LATISAVTDPEALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNMESRI 76

Query: 67  CDNLILLELALE---EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +L+E+A E    DD   L+E   +L  I+ ++   +  +LLSGE D+ +A + + A
Sbjct: 77  DDLEVLVEMATEGDGADDVETLEEAQKDLDGIRRDLGDLEVRTLLSGEWDAREAVVSIRA 136

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A ML+RMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L  
Sbjct: 137 GAGGVDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGNLSV 196

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HRLVRISP+D+  RR TSF+++ V P+++ +  ++I +++ R+D +R+SG GGQ V
Sbjct: 197 EAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHVDIPDNEIRVDVFRSSGPGGQSV 256

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  LE Q +E+      +  
Sbjct: 257 NTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAQEKAMKKEMAGD 315

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +  WG Q+RSYVLQPYQMVKDLRT  E  + S V DG++DDF++A +
Sbjct: 316 VKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGI 363


>gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
 gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
          Length = 361

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 152/329 (46%), Positives = 210/329 (63%), Gaps = 8/329 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSI 84
           L T + +P  WQ+   A+  M++           + ++ R+ D   L ELA L  +D S+
Sbjct: 31  LETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRIND---LTELAVLSREDPSL 87

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             E    +  +  E++  +     SG+ D+ +A L VHAGAGG ESQDWA MLLRM+ RW
Sbjct: 88  SNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDWAGMLLRMFMRW 147

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A K+ F  E L+   GEEAGIKSATL I+G  AYG+LK E GVHRL+R+SP+D++  RHT
Sbjct: 148 AAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFDADHARHT 207

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+ + + P  +DS++I+I   D +ID +R+SG GGQ+V    +AVR+THIP+G+VV  Q
Sbjct: 208 SFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQ 267

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVLQPYQM 322
            ERSQH+N+  A  +L +KL  +E+ KR EE A + GE    E  WG QIRSYVL PY+M
Sbjct: 268 TERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAE--WGSQIRSYVLHPYKM 325

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RT+ E  +   VL+G+LD F+ A L
Sbjct: 326 VKDHRTDYEVGNAEAVLEGELDGFISAYL 354


>gi|320335022|ref|YP_004171733.1| peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
 gi|319756311|gb|ADV68068.1| Peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
          Length = 363

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/358 (43%), Positives = 221/358 (61%), Gaps = 20/358 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L    D     +RL+ L+ + EDP+LW +   A+ + +E   L         
Sbjct: 3   ELLEKLAALREYLDIPGKTRRLNELDKELEDPNLWNDQERARRVTQEATTLRRVTEGYAS 62

Query: 62  IQDRLCDNLILLELA-------LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
           +         +L++A       LEE+  SI Q+  D+L R          E+L + +   
Sbjct: 63  LSSDAQGLSEMLDIASDDEKEMLEEEQASI-QQRVDDLYR----------ETLFTMKHSE 111

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
             A + + +GAGGTESQDWA ML+RMY RWAE+R FKTE L+  DGE+AGI SA  +++G
Sbjct: 112 APAIIRIKSGAGGTESQDWAGMLMRMYIRWAERRGFKTEILDQQDGEQAGITSAEFIVRG 171

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTY 233
             AYG +  E GVHRLVR+SP+DSN+RRHTSF+S+ + P V ++ I+I + +SD R+D Y
Sbjct: 172 DRAYGMMAPEHGVHRLVRVSPFDSNNRRHTSFASVDIVPEVPEEQIDIHVPDSDVRVDVY 231

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+ GAGGQ VNTTDSAVR+TH+PTG++V  Q  RSQ KN+  A+ +L+ +LY++E++KRE
Sbjct: 232 RSQGAGGQGVNTTDSAVRVTHLPTGLMVAIQVTRSQIKNREMAFQILKQRLYDIEVKKRE 291

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                    +  I WG QIRSYVL   Q VKD RT + +    +VLDGD++++M A L
Sbjct: 292 AEEMKARGEQKAIEWGSQIRSYVLDK-QYVKDHRTGVMRHDTGNVLDGDIEEYMWAGL 348


>gi|225552175|ref|ZP_03773115.1| peptide chain release factor 2 [Borrelia sp. SV1]
 gi|225371173|gb|EEH00603.1| peptide chain release factor 2 [Borrelia sp. SV1]
          Length = 282

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 147/285 (51%), Positives = 200/285 (70%), Gaps = 14/285 (4%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAG 126
           + E+A  E D S L+   + L+        KQ++ LL+      E D+N+A+L +H+GAG
Sbjct: 1   MCEIAENEKDTSGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAG 52

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G
Sbjct: 53  GTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVG 111

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRL+RISP+D++ +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T
Sbjct: 112 IHRLIRISPFDADKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKT 171

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI
Sbjct: 172 SSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEI 231

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 232 SWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 276


>gi|32491189|ref|NP_871443.1| hypothetical protein WGLp440 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166396|dbj|BAC24586.1| prfB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 278

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/279 (50%), Positives = 192/279 (68%), Gaps = 1/279 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++LEE+D   L E ++ +  +   ++  +       + D  + Y+++  G+GG ++QDWA
Sbjct: 1   MSLEENDSKSLLEVNNEIILLNKRMKKIELMCYFFEKNDRCNCYMDIQPGSGGIDAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++LLRMY +WA++  FKT+ +     E AGIKSAT+   G  AYGWLK E G+HRLVR S
Sbjct: 61  SILLRMYLKWADRNNFKTDIIYKSSSEIAGIKSATVKFLGSYAYGWLKKETGIHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN +RHTSF SI+VYP ++D IEI+I+ SD RID YR+SGAGGQHVN T+SAVRITH
Sbjct: 121 PFDSNGKRHTSFCSIFVYPDINDKIEIKINLSDLRIDVYRSSGAGGQHVNRTESAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT +  QCQ +RSQHKNK +A N L++KLYE EL+K+ +   I E SK++I WG QIRS
Sbjct: 181 LPTKITTQCQSDRSQHKNKEKAINQLKSKLYEFELRKKNKDKKIIEKSKSKIAWGNQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           Y+     +VKDLRT IE      +LDGDL+ F+     I
Sbjct: 241 YIFDN-SIVKDLRTGIESKKIQSILDGDLNIFLNKNFNI 278


>gi|302024124|ref|ZP_07249335.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
          Length = 253

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 134/245 (54%), Positives = 171/245 (69%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + F  E L+   G+EAGIK
Sbjct: 4   LLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIK 63

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IEIEI + 
Sbjct: 64  SVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDD 123

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q+ N+ +A  +L+AKLY+
Sbjct: 124 EVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQ 183

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT  E      V+DGDLD F
Sbjct: 184 LEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGF 243

Query: 347 MKATL 351
           + A L
Sbjct: 244 IDAYL 248


>gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547]
 gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus
           sedentarius DSM 20547]
          Length = 370

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 147/344 (42%), Positives = 214/344 (62%), Gaps = 3/344 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D     ++L+ L  ++  P LW +    + +      +   +  I+ +  R+ D  +L
Sbjct: 22  VIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIESMDSRIDDLEVL 81

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +E+  EE D   L E +  L  I+  VE  +  +LLSGE D  +A + + AGAGG ++ D
Sbjct: 82  VEMGTEEGDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITIRAGAGGVDAAD 141

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A ML+RMY RWAE+ ++ T+ L+    EEAG+KS T  +  P AYG L  E G HRLVR
Sbjct: 142 FAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNLVVEGGTHRLVR 201

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISPYD+  RR TSF+++ V PV++ +  IEI E++ ++D +R+SG GGQ VNTTDSAVR+
Sbjct: 202 ISPYDNQGRRQTSFAAVEVVPVIEQTDSIEIPENEIKVDVFRSSGPGGQSVNTTDSAVRM 261

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQ 311
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  +K EE A   E +   +  WG Q
Sbjct: 262 THIPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLQRKAEEAAERKELAGDIKASWGDQ 319

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +RSYVL PYQMVKDLRT  E  +   V DGD+D F++A +  K+
Sbjct: 320 MRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWKR 363


>gi|156744082|ref|YP_001434211.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
 gi|156235410|gb|ABU60193.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
          Length = 317

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/285 (50%), Positives = 195/285 (68%), Gaps = 7/285 (2%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L++LA  E+D S+  + +  L+R + E+E  + E LLSG  D  DA+L + AG GGT++Q
Sbjct: 27  LIDLAAAEEDDSLQADIAAELERTRREIEALEIEVLLSGPYDDRDAFLSIKAGMGGTDAQ 86

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW E+R F+   ++  DGEEAGIKSAT+ ++GP AYG  K E GVHRL+
Sbjct: 87  DWAEMLLRMYMRWGERRGFQVALIDQSDGEEAGIKSATIELRGPYAYGSAKAEAGVHRLI 146

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+SP+++ + R TSF+ + V P VDD+ E+ I   D R+D +RASG GGQ VNTTDSAVR
Sbjct: 147 RLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRPEDIRVDVFRASGHGGQGVNTTDSAVR 206

Query: 252 ITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANI-GESSKTEI 306
           IT+    P  +VV CQ ERSQ +N+  A  +LR +L E ELQ KREE A + GE  + + 
Sbjct: 207 ITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRGRLLERELQRKREERARLRGEYRQAD- 265

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +G Q+R+Y L PY +VKD RT+ E +    VLDGD+D F++A L
Sbjct: 266 -FGNQMRTYYLHPYTLVKDHRTDYETSDVQAVLDGDIDPFIEAYL 309


>gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
 gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
          Length = 398

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/339 (42%), Positives = 214/339 (63%), Gaps = 5/339 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D     ++ L+ +   P LW +   A+++     H  + +  + ++  R+ D  +L+E
Sbjct: 51  DVDALKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKLASRIDDLEVLVE 110

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L  +E D   + E +  L  I+  +   +  +LLSGE D  +A + + AGAGG ++ D+A
Sbjct: 111 LGQDEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIRAGAGGVDAADFA 170

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMY RWAE+  + T  ++    EEAG+KSAT  +K P A+G L  E G HRLVRIS
Sbjct: 171 EMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRIS 230

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+  RR TSF+++ V P+++ +  IEI +++ R+D +R+SG GGQ VNTTDSAVR+TH
Sbjct: 231 PFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTH 290

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWGRQI 312
           IPTG+VV  Q E+SQ +N+A A  +L+++L  +  E Q  E+ A  G+    +  WG Q+
Sbjct: 291 IPTGIVVSMQNEKSQLQNRAAAMRVLQSRLLLVKKEQQDAEKKALAGD---VKASWGDQM 347

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL PYQMVKDLRT  E  + S VLDGD+DDF+ A +
Sbjct: 348 RSYVLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGI 386


>gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
 gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
          Length = 373

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/351 (42%), Positives = 214/351 (60%), Gaps = 3/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   + ++ L  +   P LW +   A+ +      L   +  +  
Sbjct: 12  QLDATLTSIEKVLDLDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  +++EL+ EE+D   L E+   +  +   ++  +  +LLSGE D  +A + +
Sbjct: 72  LRSRIDDLGVMIELSREENDADSLAESEKEIAALAKSIQSLEVRTLLSGEYDEREALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML RMY RWAE+  + TE  +    EEAG+KS T  +K P AYG L
Sbjct: 132 RSGAGGVDAADFAEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EI++ E + RID YR+SG GGQ
Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIDVPEEELRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300
            VNTTDSAVRITH+PTG VV CQ E+SQ +NKA A  M+  K   L L+K EE A I   
Sbjct: 252 SVNTTDSAVRITHLPTGTVVSCQNEKSQLQNKASA--MVILKAKLLALKKAEERAQIDAL 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF++A +
Sbjct: 310 RGDVQGSWGDQMRSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGI 360


>gi|111114896|ref|YP_709514.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|216263773|ref|ZP_03435767.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
 gi|110890170|gb|ABH01338.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|215979817|gb|EEC20639.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
          Length = 269

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 141/264 (53%), Positives = 192/264 (72%), Gaps = 10/264 (3%)

Query: 97  LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           +E+E+    KQ++ LL+      E D+NDA+L +H+GAGGTE+ DW  ML RMY+R+AE+
Sbjct: 1   MEIEFNILEKQYKDLLTISYFKEELDANDAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+++ PV+D+ IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFIDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  E ++ + V+DG++D+F++  L
Sbjct: 240 TKFENSNITSVMDGNIDNFIEEYL 263


>gi|325066934|ref|ZP_08125607.1| peptide chain release factor 2 [Actinomyces oris K20]
          Length = 373

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/358 (42%), Positives = 221/358 (61%), Gaps = 6/358 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE+      IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAETDLAAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+  +  + L     EEAG+KS T  +  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L L+++EE A  
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308

Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            E +   +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|218249952|ref|YP_002374604.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223889107|ref|ZP_03623696.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224533928|ref|ZP_03674513.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226322014|ref|ZP_03797539.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
 gi|218165140|gb|ACK75201.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223885356|gb|EEF56457.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224512931|gb|EEF83297.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226232604|gb|EEH31358.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
          Length = 282

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 147/285 (51%), Positives = 199/285 (69%), Gaps = 14/285 (4%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAG 126
           + E+A  E D S L+   + L+        KQ++ LL+      E D+N+A+L +H+GAG
Sbjct: 1   MCEIAENEKDTSGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAG 52

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G
Sbjct: 53  GTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVG 111

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T
Sbjct: 112 IHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKT 171

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI
Sbjct: 172 SSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEI 231

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L
Sbjct: 232 SWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 276


>gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120]
 gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120]
          Length = 292

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/281 (49%), Positives = 198/281 (70%), Gaps = 5/281 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLEL   E D ++LQE    + ++  +++  + + LLSG  D+  A L ++AGAGGT++Q
Sbjct: 4   LLEL---ETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMYTRWAE + +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 61  DWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D++++++I + D  I T R+ G GGQ+VN  ++AVR
Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           + H+PTG+ V+C +ERSQ +NK +A   L+AKL  + + QK +EIA I      E  WG 
Sbjct: 181 VVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQI-RGDMVEASWGN 239

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRTN+E T+ +DV++G+LD F+++ L
Sbjct: 240 QIRNYVFHPYQMVKDLRTNVETTAIADVMNGELDMFIQSYL 280


>gi|320103729|ref|YP_004179320.1| peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC
           43644]
 gi|319751011|gb|ADV62771.1| bacterial peptide chain release factor 2 (bRF-2) [Isosphaera
           pallida ATCC 43644]
          Length = 334

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/322 (47%), Positives = 205/322 (63%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +   AK  + E + L+  +   + +  +  D   L+ELA E  D S+  E     
Sbjct: 4   PDFWNHQDRAKATIAEIKTLNAVLKPYEALVKQAEDLQALVELADEAGDDSLDDEIDQAT 63

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           Q+ +   +  + +S+LSG  D  +A+LE+H G GGTE+ DW+ MLLRMY  WAE + +K 
Sbjct: 64  QKAREAFDKFELQSMLSGMNDHCNAFLEIHPGEGGTEACDWSEMLLRMYMMWAESKGYKV 123

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E +   DG  AGI+SA L I G  A+G+LKGE GVHRLVRISP+D+  RR TSF+S+ V 
Sbjct: 124 ELISREDGGVAGIQSAQLKISGDYAFGYLKGEAGVHRLVRISPFDAAGRRQTSFASVDVT 183

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD+IEIEI + D + D +R  G GGQH N T+S VR TH+PTGVV + + ERSQ +N
Sbjct: 184 PEIDDTIEIEIRDCDLKRDVFRCGGPGGQHQNKTESGVRYTHLPTGVVAESRSERSQFQN 243

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
              A  +L+AKL  LE +KRE  +      K++IG+G QIRSYVLQPY +VKDLRT  E 
Sbjct: 244 DDLALKLLKAKLIRLEEEKREAESIKAYDDKSKIGFGSQIRSYVLQPYTLVKDLRTGYET 303

Query: 333 TSPSDVLDGDLDDFMKATLAIK 354
            +P  VLDGDLD F+ A L +K
Sbjct: 304 GNPRAVLDGDLDGFINAYLRMK 325


>gi|314923649|gb|EFS87480.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1]
 gi|314967087|gb|EFT11186.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2]
 gi|315092708|gb|EFT64684.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1]
 gi|315103819|gb|EFT75795.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2]
 gi|327327221|gb|EGE68997.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1]
          Length = 371

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342


>gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413]
 gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena
           variabilis ATCC 29413]
          Length = 292

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 139/281 (49%), Positives = 197/281 (70%), Gaps = 5/281 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLEL   E D ++LQE    + ++  +++  + + LLSG  D+  A L ++AGAGGT++Q
Sbjct: 4   LLEL---ETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMYTRWAE + +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 61  DWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D++++++I + D  I T R+ G GGQ+VN  ++AVR
Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           + H+PTG+ V+C +ERSQ +NK +A   L+AKL  + + QK +EIA I      E  WG 
Sbjct: 181 VVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQI-RGDMVEASWGN 239

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRTN E T+ +DV++G+LD F++A L
Sbjct: 240 QIRNYVFHPYQMVKDLRTNAETTAIADVMNGELDMFIQAYL 280


>gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 356

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W +  +A+  MR+   + + ++ +      + D  + LEL   E D  +++E    L
Sbjct: 25  PDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDAKVSLELYELEPDNEMIEEAQIGL 84

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            ++K E++  + E LLSG  D   A L ++AGAGGT++QDWA MLLRMY RWAE    K 
Sbjct: 85  CQLKTELDLWELERLLSGPYDKEGAVLAINAGAGGTDAQDWAQMLLRMYMRWAESHGMKV 144

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ I V 
Sbjct: 145 ILSELSEGEEAGIKSATIEIEGRYAYGYLQNEKGTHRLVRISPFNANGKRQTSFAGIEVM 204

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +++ + +EI E D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V+C QERSQ +N
Sbjct: 205 PQLEEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQN 264

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+YV  PYQMVKDLR+  E
Sbjct: 265 KEKAMALLKAKLMIIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRSGTE 323

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 V++GDLD F+++ L
Sbjct: 324 SNDVESVMNGDLDLFIQSLL 343


>gi|223940442|ref|ZP_03632294.1| peptide chain release factor 2 [bacterium Ellin514]
 gi|223890887|gb|EEF57396.1| peptide chain release factor 2 [bacterium Ellin514]
          Length = 384

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 160/354 (45%), Positives = 221/354 (62%), Gaps = 7/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R     GG FD  N  +RL  L++       W N  +A+ L+ E   L   +  + + 
Sbjct: 16  LARNWPTYGGFFDVANVQKRLGELDSLMAGESFWSNRDQAQKLIDESNSLRKKVEPLLKA 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + +L D  +++ELA  E      +  +D    L     E+E  + +  L+G  D N+  L
Sbjct: 76  EKQLEDYKVMIELAEAEPAAEQEKYQNDVDRELVVFNKELENLELKVFLNGPHDKNNCIL 135

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGTES DWANMLLRMY RWAE R ++ E  +   GE AGIKSATLLI G NAYG
Sbjct: 136 SINAGAGGTESCDWANMLLRMYQRWAELRGWQVEVTDALPGETAGIKSATLLISGENAYG 195

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           + K E+GVHRLVRISP+DSN RRHTSF+S+     +++  EI I  ++  +DT+R+ G G
Sbjct: 196 FCKAERGVHRLVRISPFDSNKRRHTSFASVDAIAEIEEEGEIAIPPNEFHVDTFRSGGKG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQKREEIAN 297
           GQ+VN  ++AVRITHIPTG+VV  Q +RSQH+N+A A  +L ++++   L+ QK+E    
Sbjct: 256 GQNVNKVETAVRITHIPTGLVVASQTQRSQHQNRATAMKLLLSRIFAQRLDAQKQEMERF 315

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            GE  K  + WG QIRSYV QPY+MVKDLRT +E +    V+DGDLD ++   L
Sbjct: 316 YGE--KGSVSWGNQIRSYVFQPYRMVKDLRTGVETSDVQGVMDGDLDPYVNGWL 367


>gi|213622420|ref|ZP_03375203.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 240

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/221 (63%), Positives = 169/221 (76%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 5   LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 64

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 65  DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 124

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 125 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 184

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           ITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+
Sbjct: 185 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKK 225


>gi|30692908|ref|NP_851096.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 456

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 218/336 (64%), Gaps = 7/336 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q ++ L +K  D   W +  +A+  +     L + +  + E +  + D   +++L  E D
Sbjct: 109 QEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 168

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S+L+E    ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLL
Sbjct: 169 STDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 228

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++ GE+G HR+VR SP++S
Sbjct: 229 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 288

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS + V P++ ++++ IEI E D  I   RA G GGQ+VN  ++AVRITHIPT
Sbjct: 289 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 348

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315
           GV V+C +ERSQ  NK +A   L+AKL  + E Q+  EI  I G++ K E  WG+QIR+Y
Sbjct: 349 GVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVKAE--WGQQIRNY 406

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PY++VKD+RT  E +  + V+DGDLD F+KA L
Sbjct: 407 VFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYL 442


>gi|282853672|ref|ZP_06263009.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|282583125|gb|EFB88505.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|314983205|gb|EFT27297.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3]
 gi|315092426|gb|EFT64402.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4]
          Length = 368

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 13  LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 73  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 311 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 339


>gi|314986213|gb|EFT30305.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2]
          Length = 371

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDASDFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342


>gi|30692913|ref|NP_851097.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana]
 gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 455

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 218/336 (64%), Gaps = 7/336 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q ++ L +K  D   W +  +A+  +     L + +  + E +  + D   +++L  E D
Sbjct: 108 QEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 167

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S+L+E    ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLL
Sbjct: 168 STDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 227

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++ GE+G HR+VR SP++S
Sbjct: 228 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 287

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS + V P++ ++++ IEI E D  I   RA G GGQ+VN  ++AVRITHIPT
Sbjct: 288 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 347

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315
           GV V+C +ERSQ  NK +A   L+AKL  + E Q+  EI  I G++ K E  WG+QIR+Y
Sbjct: 348 GVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVKAE--WGQQIRNY 405

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PY++VKD+RT  E +  + V+DGDLD F+KA L
Sbjct: 406 VFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYL 441


>gi|195941813|ref|ZP_03087195.1| peptide chain release factor 2 [Borrelia burgdorferi 80a]
          Length = 282

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 143/264 (54%), Positives = 192/264 (72%), Gaps = 10/264 (3%)

Query: 97  LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           LE+E+    KQ++ LL+      E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE+
Sbjct: 14  LEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 73

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 74  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 132

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 133 SVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 192

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 193 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 252

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  E ++ + V+DG++D+F++  L
Sbjct: 253 TKFENSNTTSVMDGNIDNFIEEYL 276


>gi|50842838|ref|YP_056065.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289426937|ref|ZP_06428661.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|295130890|ref|YP_003581553.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|81611548|sp|Q6A808|RF2_PROAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|50840440|gb|AAT83107.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289159877|gb|EFD08057.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|291375816|gb|ADD99670.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|332675771|gb|AEE72587.1| peptide chain release factor 2 [Propionibacterium acnes 266]
          Length = 368

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 13  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 73  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 311 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 339


>gi|326771885|ref|ZP_08231170.1| peptide chain release factor 2 [Actinomyces viscosus C505]
 gi|326638018|gb|EGE38919.1| peptide chain release factor 2 [Actinomyces viscosus C505]
          Length = 373

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 151/358 (42%), Positives = 221/358 (61%), Gaps = 6/358 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE+      IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAEMDLAAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+  +  + L     EEAG+KS T  +  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L L+++EE A  
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308

Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            E +   +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
 gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
          Length = 453

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 218/336 (64%), Gaps = 7/336 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q ++ L +K  D   W +  +A+  +     L + +  + E +  + D   +++L  E D
Sbjct: 106 QEIANLESKATDTSFWDDRTKAQETLSALNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 165

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S+L+E    ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLL
Sbjct: 166 STDVSLLEEAMGIIKELNKSLDRFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 225

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++ GE+G HR+VR SP++S
Sbjct: 226 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 285

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS + V P++ ++++ IEI E D  I   RA G GGQ+VN  ++AVRITHIPT
Sbjct: 286 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 345

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315
           GV V+C +ERSQ  NK +A   L+AKL  + E Q+  EI  I G++ K E  WG+QIR+Y
Sbjct: 346 GVAVRCTEERSQLANKTRALIRLKAKLLVIAEEQRATEIKEIRGDAVKAE--WGQQIRNY 403

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PY++VKD+RT  E +  + V+DGDLD F+KA L
Sbjct: 404 VFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYL 439


>gi|289425462|ref|ZP_06427239.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|289154440|gb|EFD03128.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|313771879|gb|EFS37845.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1]
 gi|313807112|gb|EFS45607.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2]
 gi|313809604|gb|EFS47340.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1]
 gi|313813321|gb|EFS51035.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1]
 gi|313819308|gb|EFS57022.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2]
 gi|313819957|gb|EFS57671.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1]
 gi|313823250|gb|EFS60964.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2]
 gi|313824962|gb|EFS62676.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1]
 gi|313829923|gb|EFS67637.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1]
 gi|313833072|gb|EFS70786.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1]
 gi|314924796|gb|EFS88627.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3]
 gi|314960646|gb|EFT04748.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2]
 gi|314972908|gb|EFT17005.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1]
 gi|314975668|gb|EFT19763.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1]
 gi|314978052|gb|EFT22146.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2]
 gi|314984148|gb|EFT28240.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1]
 gi|314989571|gb|EFT33662.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3]
 gi|315080944|gb|EFT52920.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1]
 gi|315084867|gb|EFT56843.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2]
 gi|315086040|gb|EFT58016.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3]
 gi|315088241|gb|EFT60217.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1]
 gi|315095727|gb|EFT67703.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1]
 gi|315105991|gb|EFT77967.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1]
 gi|327327935|gb|EGE69709.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3]
 gi|327330072|gb|EGE71825.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2]
 gi|327442693|gb|EGE89347.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1]
 gi|327443908|gb|EGE90562.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2]
 gi|327443976|gb|EGE90630.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2]
 gi|328754956|gb|EGF68572.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1]
 gi|328761406|gb|EGF74932.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1]
          Length = 371

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342


>gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102]
 gi|81573750|sp|Q7U3W6|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102]
          Length = 374

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 149/323 (46%), Positives = 208/323 (64%), Gaps = 8/323 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETS 89
           P  W +   A+  MR    LD   + ++++ D    + D    LEL   E D  +L E  
Sbjct: 43  PDFWDDQQAAQKQMR---RLDEVKAQLQQLADWGGAVDDAKATLELYELEPDEEMLTEAQ 99

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L +++  ++  + E LLSG+ D   A L ++AGAGGT++QDWA MLLRMYTRWAE   
Sbjct: 100 EGLNQLRQGLDRWELERLLSGDYDKEGAVLTINAGAGGTDAQDWAQMLLRMYTRWAEDHG 159

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K    E+ +GEEAGIKS T+ ++G  AYG+L+ E+G HRLVRISP+++N +R TSF+ I
Sbjct: 160 MKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGI 219

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+ ++I+I E D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V+C QERSQ
Sbjct: 220 EVMPKIDEEVDIDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQ 279

Query: 270 HKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            +NK +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+YV  PYQMVKDLRT
Sbjct: 280 LQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRT 338

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           + E      V+DG LD F+ A+L
Sbjct: 339 SEETNDVQAVMDGALDPFIDASL 361


>gi|68171151|ref|ZP_00544559.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999421|gb|EAM86062.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 221

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 131/220 (59%), Positives = 168/220 (76%), Gaps = 1/220 (0%)

Query: 136 MLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ML RMY RWAE    FKTE +   DGEE G+KSAT+ + G NAYGW K E G+HRLVRIS
Sbjct: 1   MLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRIS 60

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P++SN++RHT+FSSI V PV+++   IEI + D RIDTYRASGAGGQHVN T+SAVRITH
Sbjct: 61  PFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITH 120

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IP+G+VVQCQ  RSQH+N A+A N+L+++LY+L+LQ++E+      + +  IGWG QIRS
Sbjct: 121 IPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRS 180

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV+ PYQMVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 181 YVMHPYQMVKDIRTGHEIGNVNSVLDGNLDSFIISALTTK 220


>gi|216264821|ref|ZP_03436813.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226320754|ref|ZP_03796310.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
 gi|215981294|gb|EEC22101.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226233809|gb|EEH32534.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
          Length = 269

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 142/264 (53%), Positives = 192/264 (72%), Gaps = 10/264 (3%)

Query: 97  LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           +E+E+    KQ++ LL+      E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE+
Sbjct: 1   MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  E ++ + V+DG++D+F++  L
Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYL 263


>gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205]
          Length = 356

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 147/340 (43%), Positives = 212/340 (62%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      R   L      P  W +   A+  MR+   +   +  + + +  + D    
Sbjct: 5   VFDVAALKARQQDLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAEAT 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +E+   E D  +L E+   L++++ +++  + E LLSG  D   A + ++AGAGGT++QD
Sbjct: 65  VEIYGLEPDDELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML+RMYTRWAE    K    E+ DGEEAGIKS T+ I+G  AYG+L+ E+G HRLVR
Sbjct: 125 WALMLMRMYTRWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R  EIA+I      E  WG Q
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRT  E T    V+DGDLD F+++ L
Sbjct: 304 IRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
 gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
          Length = 357

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/354 (44%), Positives = 217/354 (61%), Gaps = 14/354 (3%)

Query: 7   LNCLGGLF----DWDNAVQRLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +N     F    D+D + + L    L   +  P  WQ+   A+ +M++           +
Sbjct: 1   MNLRAAFFLIWCDFDVSAKELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWR 60

Query: 61  EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++ R+ D   L ELA L  +D S+  E    +  +  E+   +     SG+ D+ +A L
Sbjct: 61  GLERRVND---LTELAVLSYEDPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALL 117

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            VHAGAGG ESQDWA MLLRM+ RWAEK+ F  E L+   GEEAG+KSATL I G  AYG
Sbjct: 118 TVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYG 177

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E GVHRL+R+SP+D++  RHTSF+ + + P  +DS++I+I   D +I+ +R+SG G
Sbjct: 178 FLKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIEMFRSSGPG 237

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI 298
           GQ+V    +AVRITHIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR EE A +
Sbjct: 238 GQNVQKVSTAVRITHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKL 297

Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            GE    E  WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L
Sbjct: 298 KGERISAE--WGNQIRSYVLHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYL 349


>gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1]
          Length = 368

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 153/349 (43%), Positives = 220/349 (63%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D     Q +  L+ +   P LW +V  A+ +     +    +  + ++
Sbjct: 12  LDTTLSSIEAVADVPRLRQEIEELSEQAGRPDLWDDVEAAQKITSRLAYAQGDLRRLDDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D + + +   +  R++ E+   +  +LLSGE D  +A + + 
Sbjct: 72  RRRLDDLPVLYELAEDEGDQAAVADADADRARLRSEIASLEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  E    EEAGIKSAT  +  P A+G L 
Sbjct: 132 SEAGGIDAADFAEMLLRMYLRWAERHGYGTDVFETSYAEEAGIKSATFAVHAPYAFGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E D R+D +RASG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESSDHVEIDEKDLRVDVFRASGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL +   Q+  E+ +  + S
Sbjct: 252 VNTTDSAVRLTHIPTGIVVACQNERSQLQNKASAMVVLQAKLLDRRRQEERELMDSFKDS 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +   WG Q+R+YVL PYQ+VKDLRT  E+ +PS VLDG++DDF++A +
Sbjct: 312 GS--SWGNQMRNYVLHPYQLVKDLRTEHEEGNPSQVLDGEIDDFIEAGI 358


>gi|260102492|ref|ZP_05752729.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
 gi|260083697|gb|EEW67817.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
          Length = 332

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 154/315 (48%), Positives = 203/315 (64%), Gaps = 6/315 (1%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
           Q +I    L++E++      SF+K  QD   D L  LEL   E D  + QE   +L+ ++
Sbjct: 14  QKLISDNNLLKEKRD-----SFLKLQQD-YEDELTALELLRAEPDADLQQEVETDLKDLQ 67

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                 + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   FK E  +
Sbjct: 68  EAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAGFKFEIND 127

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
              GEEAG+KS ++ I G NAYG LK E GVHRLV ISP+D+  RRHTSF+S+ V P +D
Sbjct: 128 YEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVIISPFDAAKRRHTSFASVEVIPEID 187

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           DSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A
Sbjct: 188 DSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQNRETA 247

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
            N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT  E    +
Sbjct: 248 MNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYETADVN 307

Query: 337 DVLDGDLDDFMKATL 351
            V+DG L  F+ + L
Sbjct: 308 GVMDGKLQPFIYSYL 322


>gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
 gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
          Length = 364

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 149/347 (42%), Positives = 217/347 (62%), Gaps = 4/347 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L    G    +   +RL  L+     P  W +   A+   +    + + +   + 
Sbjct: 11  ELAERLAAARGYLHIEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLE 120
               L D    LEL +EEDD   ++   D L+  +   ++  + ES  +  +D+ DA + 
Sbjct: 71  ACATLEDARAALEL-IEEDDAFAVE--FDELRAGLSSALDRMEVESWFTDPSDACDAIVS 127

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V+ G+GG E+QDW +ML RMY R+AEK+ +K + L++  GE  G+  A + I+G NA+G 
Sbjct: 128 VNPGSGGLEAQDWTDMLYRMYVRYAEKKGWKVKLLDVVPGEVIGLDRAVVQIEGKNAFGM 187

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVRISP D   RR T+F+ + V PVV+D IE+EI+ SD R+D YR+SG GG
Sbjct: 188 LRSEHGVHRLVRISPTDDKKRRQTTFAGVEVLPVVEDDIEVEINPSDVRVDVYRSSGPGG 247

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A+ +LRAKLYELE QKRE+  +   
Sbjct: 248 QCVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKESAFKVLRAKLYELERQKREDEMDALR 307

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             K +  +G QIR+YVL PYQ+VKD+R+ +E  +   VLDG +D+F+
Sbjct: 308 GEKRDNSFGSQIRNYVLYPYQLVKDVRSGVETGNVDAVLDGQIDEFV 354


>gi|297564871|ref|YP_003683843.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
 gi|296849320|gb|ADH62335.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
          Length = 375

 Score =  279 bits (713), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 162/354 (45%), Positives = 218/354 (61%), Gaps = 9/354 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ L G  D      RL  L  K  DPHLW N  EAK + +E   L  A+   + +
Sbjct: 16  LQHRLDALRGYLDIAGKESRLRELEVKLNDPHLWDNPTEAKAISQEATRLRKAVENYRRL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   L+ L   L  ++ + +Q   D   R +LE  Y Q  +LLS     N A + + 
Sbjct: 76  ESDL-QGLLELWPELSAEERAQMQPELDKAGR-ELEDLYHQ--TLLSFPYAENAAIVTIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA ML RMYTR+AE+  FK E +++  G EAGI  A  +++G  AYG L 
Sbjct: 132 PGAGGTEACDWAEMLYRMYTRFAERHGFKVEVVDVEPGAEAGIDLAQFIVRGEYAYGLLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+++  +R TSF+++ V P VD+S+E+ I+  D RID  R+ G GGQ 
Sbjct: 192 AEAGVHRLVRPSPFNAQGKRQTSFAALEVMPEVDESVEVAINPEDLRIDVMRSQGKGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GE 300
           VNTTDSAVR+ H+PTG++V+CQ  RSQ KNK  A N+LR+KL+E+E +K+ EE+A + GE
Sbjct: 252 VNTTDSAVRVVHLPTGIMVKCQITRSQQKNKELAMNILRSKLFEIEWKKKQEELARLKGE 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           S   E  WG QIRSYVL   Q VKD RT   +  P +VLDGDL++ + A L  K
Sbjct: 312 SRPNE--WGSQIRSYVLDK-QYVKDHRTGEMRHDPENVLDGDLENLVWAGLEWK 362


>gi|146300308|ref|YP_001194899.1| peptide chain release factor 2 [Flavobacterium johnsoniae UW101]
 gi|146154726|gb|ABQ05580.1| bacterial peptide chain release factor 2 (bRF-2) [Flavobacterium
           johnsoniae UW101]
          Length = 254

 Score =  279 bits (713), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 128/247 (51%), Positives = 182/247 (73%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LS E DS  A +++ AGAGGTES DWA ML+RMY  W E   +K + L   +G+ AGIK
Sbjct: 1   MLSDEGDSLSAVVQITAGAGGTESCDWAGMLMRMYMMWGESYGYKIKELNFQEGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           + TL  +G  ++G+LKGE GVHRLVRISP+DSN++RHTSF S++VYP+VDDSIEI+I+ +
Sbjct: 61  TVTLEFEGDYSFGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDSIEIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  I T R+SGAGGQ+VN  ++ V++ H PTG+ +QC + RSQ  N+ +A  MLR++LYE
Sbjct: 121 DIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQIQCSETRSQQDNRQRAMQMLRSQLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +EL+K++      E+ K +I WG QIR+YV+QPY++VKD+RT  E +    V++G++D F
Sbjct: 181 IELKKQQAQRADIEAGKMKIEWGSQIRNYVMQPYKLVKDVRTGYETSDVDGVMNGNIDAF 240

Query: 347 MKATLAI 353
           +KA L +
Sbjct: 241 LKAYLMM 247


>gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24]
 gi|229576665|sp|A0JYC5|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp.
           FB24]
          Length = 371

 Score =  279 bits (713), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 210/326 (64%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ +  +P+LW +   A+ +     H  + +  +  +  R+ D  +L+EL  +EDD   +
Sbjct: 36  LSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTLVSRIDDLEVLVELGQDEDDADSM 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E +  L+ I+  ++  +  +LLSGE D  +A + + AGAGG ++ D+A MLLRMY RWA
Sbjct: 96  GEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIRAGAGGVDAADFAEMLLRMYLRWA 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  + T  ++    EEAG+KSAT  +  P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+++ +  I+I +++ R+D +R+SG GGQ VNTTDSAVR+THIPTG VV  Q 
Sbjct: 216 FAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHIPTGTVVSMQN 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           E+SQ +N+A A  +L+++L  L+ +++E+      +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 EKSQLQNRAAALRVLQSRLLLLK-KEQEDAEKKAFAGDVKASWGDQMRSYVLNPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E  + S V DG++DDF+ A +
Sbjct: 335 LRTEHEVGNTSAVFDGEIDDFIDAGI 360


>gi|184200580|ref|YP_001854787.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
 gi|183580810|dbj|BAG29281.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
          Length = 372

 Score =  279 bits (713), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 140/345 (40%), Positives = 221/345 (64%), Gaps = 11/345 (3%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + +  + D +  ++ ++ L  +   P LW N  EA+ +  +  H  + +  +++I+ R+ 
Sbjct: 18  DSVAAVSDAEMLLKEITELEQQAAAPDLWDNPDEAQKVTSQLSHKQSKVDRLRKIESRID 77

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D  +++ELA +EDD      ++  L  I+  +   + ++LL+GE D  +A + + +GAGG
Sbjct: 78  DLEVMVELAEDEDDQETRDASATELTSIQKALSELEIQTLLAGEYDEREAVVTIRSGAGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ++ D+A +L+RMY RWAE+  + T+ L+    EEAG+KSAT  +K P A+G L  E G 
Sbjct: 138 VDAADFAEILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGT 197

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+  RR TSF+++ V P+++    +EI E++ ++D +R+SG GGQ VNTTD
Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVIPLIESDDTVEIPETELKVDVFRSSGPGGQSVNTTD 257

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-----ELELQKREEIANIGESS 302
           SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L      E + +K+E   ++  S 
Sbjct: 258 SAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRQEEADAKKKEMAGDVKAS- 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
                WG Q+RSYVL PYQMVKDLRTN E+ +PS V DG +D F+
Sbjct: 317 -----WGDQMRSYVLNPYQMVKDLRTNYEEGNPSSVFDGGIDSFI 356


>gi|91215788|ref|ZP_01252758.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
 gi|91186254|gb|EAS72627.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
          Length = 316

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 137/290 (47%), Positives = 205/290 (70%), Gaps = 7/290 (2%)

Query: 65  RLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +L ++L +L    EE D S   I ++ ++ L+ I    E  +F+++LS E+D   A L++
Sbjct: 19  QLVEDLNVLFEFFEEGDVSEDEIKEKYAEALELI----EDLEFKNMLSEESDPLTAILQI 74

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA ML+RMY  WA++R FK   L    G+ AGIK+ TL I+G  A+GWL
Sbjct: 75  TAGAGGTESCDWAEMLMRMYIMWADRRNFKIRELNHQGGDVAGIKTVTLEIEGEYAFGWL 134

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ S+ + +  R+ GAGGQ
Sbjct: 135 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPSEIKWEFARSGGAGGQ 194

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++LYE+EL+K++   +  ES
Sbjct: 195 NVNKVETKAILTHYPSGIVIHNSETRSQLENRQKAMQMLKSQLYEIELKKQQAARSEIES 254

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K  I WG QIR+YV+ PY++VKD+RT  E  +  D+++G +D F+K+ L
Sbjct: 255 EKKSIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDDIMNGHIDSFLKSYL 304


>gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2]
          Length = 372

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 143/342 (41%), Positives = 213/342 (62%), Gaps = 3/342 (0%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D DN    ++ +  +   P  W +   A+ +     H    +  +++  +R+ D  +++E
Sbjct: 24  DLDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQGTLEKLEKFGERIDDAELIIE 83

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++ +E D     E   +L+++  ++   +  +LL+ E D   A + V +GAGG ++ DWA
Sbjct: 84  MSEDEGDEDSKVEAERDLKKLHDQLAELEISTLLNHEYDERSAVVTVRSGAGGDDATDWA 143

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMY RWAE R +  + L+    E AGIKSAT+ +  P AYG L  E G HRLVRIS
Sbjct: 144 QMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNAPYAYGTLSVEAGTHRLVRIS 203

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+  RR TSF+++ V P+++ +  +EI E+D RID YR+SG GGQ VNTTDSAVRITH
Sbjct: 204 PFDNQGRRQTSFAAVEVVPLIESTDHVEIDENDLRIDVYRSSGPGGQSVNTTDSAVRITH 263

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIR 313
            PTGVVV  Q E+SQ +N+  A  +L+++L  L+L+++EE A   E +   +  WG Q+R
Sbjct: 264 APTGVVVSMQNEKSQIQNREAAMRVLQSRL--LDLKRKEEAAEKKELAGDIKASWGDQMR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SYV  PYQMVKDLRT  E  +PS+V DGDLD  ++A +  +K
Sbjct: 322 SYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLIEAGIRWRK 363


>gi|313792395|gb|EFS40490.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1]
 gi|313801469|gb|EFS42718.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2]
 gi|313838232|gb|EFS75946.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1]
 gi|314963179|gb|EFT07279.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1]
 gi|315078242|gb|EFT50285.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2]
 gi|327453496|gb|EGF00151.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1]
          Length = 371

 Score =  278 bits (712), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 205/329 (62%), Gaps = 2/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D       ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPAAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342


>gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
           animalis subsp. lactis BB-12]
 gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 377

 Score =  278 bits (712), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/326 (43%), Positives = 203/326 (62%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +   P LW +   A+ +M +     + +  +     RL D   L+EL  EE+D   L
Sbjct: 36  LEQQASAPGLWDDSEHAQKVMSQLSACQSQLKHLSSAASRLDDVATLIELGQEENDADTL 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    ++ I+ +++  + E+L+ GE DS  A + + +GAGG ++ D+A MLLRMY RWA
Sbjct: 96  HEAQTEIESIQKDLDQMEIETLMDGEYDSRSAVVTIRSGAGGVDAADFAQMLLRMYLRWA 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  +K + ++    EEAGIKSAT  I  P AYG +  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERNGYKAKVMDTSYAEEAGIKSATFQIDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+V+ +  IE+ +S+ R+DTY ASG GGQ VNTT SAVRITH+PTG+VV  Q 
Sbjct: 216 FAAVEVVPLVEATDHIEVPDSEIRVDTYCASGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 ERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E +    V DGD+D+F++A +
Sbjct: 335 LRTGCETSQTQAVFDGDIDEFIQAGI 360


>gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL2A]
 gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. NATL2A]
          Length = 313

 Score =  278 bits (712), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 140/280 (50%), Positives = 193/280 (68%), Gaps = 2/280 (0%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL   + D  IL E  + L+++K E+E  + E LLSG  D   A L ++AGAGGT++QD
Sbjct: 28  VELYELDPDEEILSEAHNGLEQLKQELERWETERLLSGIYDKEGAVLSINAGAGGTDAQD 87

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRLVR
Sbjct: 88  WAQMLLRMYTRWAENNGMKVSINELSEGEEAGIKSVTIEIEGVYAYGFLQNEKGTHRLVR 147

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +D+ +E+EI E D  I T R+ GAGGQ+VN  ++AVRI
Sbjct: 148 ISPFNANGKRQTSFAGVEVMPKLDEEVELEIPEKDLEITTSRSGGAGGQNVNKVETAVRI 207

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            H+PTG+ V+C QERSQ +NK +A  +L++KL  + +++R  EIA+I      E  WG Q
Sbjct: 208 LHVPTGIAVRCTQERSQLQNKDKAMALLKSKLMVIAVEQRAAEIADI-RGDIVEAAWGNQ 266

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRT  E T    V++G +D F+++ L
Sbjct: 267 IRNYVFHPYQMVKDLRTEQETTDVDSVMNGKIDIFIQSLL 306


>gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
 gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
          Length = 330

 Score =  278 bits (712), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 144/321 (44%), Positives = 216/321 (67%), Gaps = 3/321 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N+  A+  ++E     +++   +    +L D   ++EL   E D ++L+E +DNL
Sbjct: 5   PTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRTLLEEATDNL 64

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++ +++  + + LL+G  D+  A L ++AGAGGT++QDW  MLLRMY+RWAEK+ +K 
Sbjct: 65  THLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              EI +G+EAGIKS T+ I G  AYG+LKGE+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184

Query: 213 PVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P++ DD++ +EI + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C QERSQ +
Sbjct: 185 PILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244

Query: 272 NKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK +A  +L+AKL  +   Q+ + IA I      E  WG QIR+YV  PYQ+VKDLR+N+
Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEI-RGDMVEAAWGNQIRNYVFHPYQLVKDLRSNV 303

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T  + V++GDLD F++A L
Sbjct: 304 ETTDVTRVMNGDLDSFIEAYL 324


>gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
 gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
          Length = 358

 Score =  278 bits (712), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 148/340 (43%), Positives = 211/340 (62%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      R   L      P  W +   A+  MR+   +   +  ++  +  + D    
Sbjct: 5   VFDVPALKARQQDLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAEAT 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL   E D  +L+E +  L  ++ +++  + E LLSG  D   A L ++AGAGGT++QD
Sbjct: 65  LELHELEPDGDLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWAE         E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRLVR
Sbjct: 125 WAQMLLRMYTRWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +++ ++++I + D  I T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R  EIA+I      E  WG Q
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQ+VKDLRT  E T    V+DGDLD F+++ L
Sbjct: 304 IRNYVFHPYQLVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
 gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
          Length = 356

 Score =  278 bits (712), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 149/340 (43%), Positives = 209/340 (61%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD      R   L      P  W +   A+  MR    +   +  + + +  + D    
Sbjct: 5   VFDVPALKARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDADAT 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL   E D  +L E    L +++ E++  + E LLSGE D   A L ++AGAGGT++QD
Sbjct: 65  VELYALEPDDDMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRLVR
Sbjct: 125 WALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R  EIA+I      E  WG Q
Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRT  E      V+DGDLD F+++ L
Sbjct: 304 IRNYVFHPYQMVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343


>gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107]
 gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107]
          Length = 356

 Score =  278 bits (711), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 152/337 (45%), Positives = 211/337 (62%), Gaps = 15/337 (4%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLEL 75
           LN + +D       P  W +   A+  MR    LD   + +K++ D    + D    LEL
Sbjct: 11  LNARQQDLEQLAAQPDFWNDQQNAQKQMR---RLDEVKAQLKQLADWRSAIDDAKATLEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              E D  +L E    L  ++  ++  + E LLSGE D   A L ++AGAGGT++QDWA 
Sbjct: 68  YELEADEDMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQ 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMYTRWAE    +    EI +GEEAGIKSAT+ ++G  AYG+L+ E+G HRLVRISP
Sbjct: 128 MLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVRISP 187

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +++N +R TSF+ I V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AVRI H+
Sbjct: 188 FNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHL 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRS 314
           PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+
Sbjct: 248 PTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRN 306

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YV  PYQMVKDLRT  E      V+DG LD F+ A+L
Sbjct: 307 YVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASL 343


>gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL1A]
 gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           NATL1A]
          Length = 313

 Score =  278 bits (711), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 142/284 (50%), Positives = 198/284 (69%), Gaps = 5/284 (1%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +L L EL L+E+   IL E  + L+++K E++  + E LLSG  D   A L ++AGAGGT
Sbjct: 27  SLELYELDLDEE---ILSEAHNGLEKLKQELDRWETERLLSGIYDKEGAVLSINAGAGGT 83

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDWA MLLRMYTRWA+    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G H
Sbjct: 84  DAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEAGIKSVTIEIEGVYAYGFLQNEKGTH 143

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+++N +R TSF+ + V P +D+ +E+EI E D  I T R+ GAGGQ+VN  ++
Sbjct: 144 RLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPEKDLEITTSRSGGAGGQNVNKVET 203

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307
           AVRI H+PTG+ V+C QERSQ +NK +A  +L++KL  + L++R  EIA+I      E  
Sbjct: 204 AVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLMVIALEQRAAEIADI-RGDIVEAA 262

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIR+YV  PYQMVKDLRT  E T    V++G++D F+++ L
Sbjct: 263 WGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGEIDIFIQSLL 306


>gi|323466941|gb|ADX70628.1| Peptide chain release factor 2 [Lactobacillus helveticus H10]
          Length = 332

 Score =  278 bits (711), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 157/325 (48%), Positives = 207/325 (63%), Gaps = 12/325 (3%)

Query: 33  PHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           P  W      Q +I    L++E++      SF+K  QD   D L  LEL   E D  + Q
Sbjct: 4   PGFWDDQEGAQKLISDNNLLKEKRD-----SFLKLQQD-YEDELTALELLRAEPDADLQQ 57

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   +L+ ++      + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +
Sbjct: 58  EVETDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCD 117

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              FK E  +   GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+  RRHTSF
Sbjct: 118 AAGFKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDATKRRHTSF 177

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +
Sbjct: 178 ASVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQ 237

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+  A N LRAKL+ LE +K+++     +  + EIGWG QIRSYV  PY +VKDL
Sbjct: 238 RSQLQNRETAMNELRAKLFHLEEEKKQKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDL 297

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RT  E    + V+DG L  F+ + L
Sbjct: 298 RTGYETADVNGVMDGKLQPFIYSYL 322


>gi|256826989|ref|YP_003150948.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
 gi|256583132|gb|ACU94266.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
          Length = 364

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/328 (45%), Positives = 205/328 (62%), Gaps = 4/328 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QRL+ L+ +T  P  W ++  A+ + +E   +   +   +     L D    L+LA ++ 
Sbjct: 28  QRLAELDQQTAQPGFWDDIDRAQAVSKEASDIRTLLDTYEHAHTLLDDWRCALDLAQDDP 87

Query: 81  DCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           D +   Q+ +D L R+  + E    ES      D  D  + ++ G+GG E+QDW +ML  
Sbjct: 88  DFATEAQKAADELSRLLDDFE---IESWFGNRFDEGDCIVTINPGSGGLEAQDWCDMLFH 144

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYT++AE R +K   L+   GE  GI+ A+  I+G  AYG L+ E GVHRLVRISP D  
Sbjct: 145 MYTKYAENRGWKVRVLDAPLGEVIGIEHASFQIEGRFAYGMLRSEIGVHRLVRISPTDDK 204

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            RRHT+F+S+ V PV+ D IE+ ++ +D R+D YRASG GGQ VNTTDSAVR+THIPTG 
Sbjct: 205 KRRHTTFASVEVMPVLPDDIEVNLNPADVRVDVYRASGPGGQCVNTTDSAVRLTHIPTGT 264

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VV CQ ++SQ +NK  A+ +LRA+L+ELE +KR+E        K E  +G QIR+YVL P
Sbjct: 265 VVTCQNQKSQLQNKEAAFRILRARLFELEERKRQEEIEALRGEKRENSFGSQIRNYVLYP 324

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           YQMVKDLR+ IE  +   VL GDLD F+
Sbjct: 325 YQMVKDLRSGIETGNVDAVLGGDLDQFV 352


>gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
 gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 151/341 (44%), Positives = 221/341 (64%), Gaps = 3/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD       +  L   +  P  W     A+  ++E   L + +   ++   +L D   +
Sbjct: 11  IFDLPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTKAI 70

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            EL   EDD ++ QE  DN+ ++   ++  + + LLSG  D+  A L ++AGAGGT++QD
Sbjct: 71  AELLELEDDATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQD 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRW E++ +K    E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRLVR
Sbjct: 131 WAQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           ISP+++N +R TSF+ I + P + +D ++++I + D  I T R+ G GGQ+VN  ++AVR
Sbjct: 191 ISPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           + H+PTG+ V+C QERSQ +NK +A  +L+AKL  + E Q+ +EIA I      E  WG 
Sbjct: 251 VVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEI-RGDIVEAAWGT 309

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRTNIE T  + V+DG LD+F++A L
Sbjct: 310 QIRNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYL 350


>gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
 gi|254790908|sp|B8HBH8|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
          Length = 371

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 210/326 (64%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ +  +P LW +   A+ +     H  + +  +  +  R+ D  +L+EL  +E D   +
Sbjct: 36  LSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTLASRIDDLEVLVELGQDEGDADSM 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E +  L+ I+  ++  +  +LLSGE D  +A + + AGAGG ++ D+A ML+RMY RWA
Sbjct: 96  GEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIRAGAGGVDAADFAEMLMRMYLRWA 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  + T  ++    EEAG+KSAT  +K P A+G L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+++ +  I+I +++ R+D +R+SG GGQ VNTTDSAVR+THIPTGVVV  Q 
Sbjct: 216 FAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHIPTGVVVSMQN 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           E+SQ +N+A A  +L+++L  L+ +++E+      +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 EKSQLQNRAAAMRVLQSRLLLLK-KEQEDAEKKALAGDVKASWGDQMRSYVLNPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E  + S V DG++DDF+ A +
Sbjct: 335 LRTEHEVGNTSAVFDGEIDDFIDAGI 360


>gi|224532320|ref|ZP_03672952.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
 gi|224511785|gb|EEF82191.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
          Length = 269

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 140/264 (53%), Positives = 190/264 (71%), Gaps = 10/264 (3%)

Query: 97  LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           +E+E+    KQ++ LL+      E D+N A+L +H+GAGGTE+ DW  ML RMY+R+ E+
Sbjct: 1   MEIEFNILEKQYKDLLTISYFKEELDANGAFLTIHSGAGGTEACDWVAMLYRMYSRYVER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKEMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  E ++ + V+DG++D+F++  L
Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYL 263


>gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
 gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
          Length = 377

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 207/331 (62%), Gaps = 3/331 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           +++ L  +   P LW +   A+ +             + E   RL D   L  L +EE+D
Sbjct: 32  KIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTEAGQRLDDIDTLYSLGMEEED 91

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
               QE    L+++  ++   + ++LL GE D+  A + + +GAGG ++ DWA ML+RMY
Sbjct: 92  EDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTIRSGAGGVDAADWAQMLMRMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE+ ++K + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+NSR
Sbjct: 152 IRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKLSVEGGTHRLVRISPFDNNSR 211

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF+++ V P+V+ +  I++ +SD R+DTY + G GGQ VNTT SAVR+TH+PTG+VV
Sbjct: 212 RQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQGVNTTYSAVRLTHLPTGIVV 271

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPY 320
             Q ERSQ +N+A A  +L+++L  L L++ EE A   E +   +  WG Q+RSYVL PY
Sbjct: 272 TMQDERSQIQNRAAAMAVLQSRL--LVLKQEEEAAKKKELAGDIKASWGDQMRSYVLHPY 329

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QMVKDLRT  E + P  V DGD+D F+ A +
Sbjct: 330 QMVKDLRTGYETSDPQAVFDGDIDGFIDAGI 360


>gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902]
 gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp.
           CC9902]
          Length = 356

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/334 (44%), Positives = 208/334 (62%), Gaps = 9/334 (2%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           LN + +D       P  W +   A+  MR    +   +  + + +  + D    LEL   
Sbjct: 11  LNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAKATLELYEL 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +L E    L  ++  ++  + E LLSGE D   A L ++AGAGGT++QDWA MLL
Sbjct: 71  EADEEMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE    +    EI +GEEAGIKSAT+ ++G  AYG+L+ E+G HRLVRISP+++
Sbjct: 131 RMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVRISPFNA 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ I V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AVRI H+PTG
Sbjct: 191 NDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHLPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+YV 
Sbjct: 251 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQMVKDLRT  E      V+DG LD F+ A+L
Sbjct: 310 HPYQMVKDLRTQEETNDVQAVMDGALDPFIDASL 343


>gi|217963389|ref|YP_002349067.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
 gi|217332659|gb|ACK38453.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
          Length = 304

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 137/264 (51%), Positives = 179/264 (67%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  EE D
Sbjct: 4   RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R
Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV
Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243

Query: 262 QCQQERSQHKNKAQAWNMLRAKLY 285
            CQ ERSQ KN+ QA  ML+ KLY
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLY 267


>gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 370

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/350 (41%), Positives = 219/350 (62%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  + G+ D      +++ L+ +   P LW +   A+ +          ++ +K +
Sbjct: 13  LRSTLESIEGVSDPVALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNRVKSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+EL  E  D   L E    +  I+ +++  +  +LLSGE D+ DA + + 
Sbjct: 73  GRRIDDVETLVELGQEMGDEDSLTEAEAEVVGIRKDLDALEVRTLLSGEYDARDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  F T+ ++    EEAG+KSAT  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPYAFGNLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDSVEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++++EE A   E +
Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLVRQQEEAAKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG Q+RSYVLQPYQMVKDLRT  E  + + V DG +D+F++A +
Sbjct: 311 GDIKASWGDQMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGI 360


>gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
 gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
          Length = 369

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 146/330 (44%), Positives = 200/330 (60%), Gaps = 1/330 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q++S L  ++  P+ W +   A+ +M +   L + ++ I   +++L D     EL  E  
Sbjct: 30  QQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGIDRAKEKLGDAEAAFELGTELG 89

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   E+      ++ ++   +  S  + E D  DA + +  G GG ESQDW  ML  M
Sbjct: 90  DQASFDESRALAVSLEKDLSELELSSWFTDELDHGDAIVTIKPGQGGLESQDWCEMLFHM 149

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y ++ ++R +K +  +    E  G+  AT  + G NAYG L+ EQGVHRLVRISP D   
Sbjct: 150 YLKYCDRRGWKVDINDAPAAEVIGLDRATFTVSGKNAYGMLRAEQGVHRLVRISPTDDKK 209

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RR TSF+ + V PV+ + IE++I  +D RID Y ASG GGQ VNTTDSAVRITHIPTG V
Sbjct: 210 RRQTSFAGVEVLPVLPEDIEVDIDPNDLRIDVYHASGPGGQGVNTTDSAVRITHIPTGTV 269

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ ERSQ +NKA A N+LR++LYE+E +KRE   +     K EI +G QIRSYVL PY
Sbjct: 270 VTCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGPKREISFGNQIRSYVLYPY 329

Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKA 349
           Q++KDLRT  E  +   V  DGDLD F+ A
Sbjct: 330 QLIKDLRTGAETGNVESVFSDGDLDQFIIA 359


>gi|111220808|ref|YP_711602.1| peptide chain release factor 2 [Frankia alni ACN14a]
 gi|111148340|emb|CAJ60012.1| peptide chain release factor RF-2 [Frankia alni ACN14a]
          Length = 369

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/350 (42%), Positives = 215/350 (61%), Gaps = 4/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L+ +  + D +   +R   L  +  DP LW +   A+++ R        IS ++ 
Sbjct: 14  QLDATLSGIESVLDVEGLRRRAEELERQAADPDLWSDQDRAQVVTRRLSSTRGDISRVEG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D     +L        +L E + +L  +  ++   +  +LLSGE D  DA +++
Sbjct: 74  LRRRLDDIAAAADLGD----DDLLAEAAADLPALNGDISALEVRTLLSGEFDERDAIVQL 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L
Sbjct: 130 SAGAGGVDAADWTAMLLRMYLRWAERHGYPTEVFDTSEAEEAGLKSATFQVKAPYAYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  ++I + D RID +R+SG GGQ
Sbjct: 190 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 250 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAAKQRITG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++ +G QIR+YVL PYQ+VKDLRT+ E ++   VLDG+LD+F+ A +
Sbjct: 310 GPQDVSFGSQIRNYVLHPYQLVKDLRTDTETSNTGGVLDGELDNFIDAEI 359


>gi|313816439|gb|EFS54153.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1]
 gi|313827262|gb|EFS64976.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2]
 gi|314917824|gb|EFS81655.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1]
 gi|314919714|gb|EFS83545.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3]
 gi|314930043|gb|EFS93874.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1]
 gi|314956378|gb|EFT00690.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1]
 gi|314957250|gb|EFT01353.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1]
 gi|314967699|gb|EFT11798.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1]
 gi|315098170|gb|EFT70146.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2]
 gi|315101677|gb|EFT73653.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1]
 gi|315109496|gb|EFT81472.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2]
 gi|327452380|gb|EGE99034.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3]
 gi|327452743|gb|EGE99397.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2]
 gi|328753837|gb|EGF67453.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1]
          Length = 370

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T++ + +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341


>gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f]
 gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f]
          Length = 366

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 202/327 (61%), Gaps = 4/327 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D +   +R   L  +  DP LW +   A+ + R    +   I+ +  ++ RL D +  
Sbjct: 22  VLDIEGLRRRAQELEQEAADPDLWSDQARAQAVTRRLSGVKGDIARVDGLRRRLDDLIAA 81

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+L     D  +L E + +L  +  ++   +  +LLSGE D  DA +++ AGAGG ++ D
Sbjct: 82  LDLG----DEDLLAEMAVDLPSLTRDISALEVRTLLSGEYDERDAIVQLSAGAGGVDAAD 137

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  ++ P AYG L+ E GVHRLVR
Sbjct: 138 WTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVRCPYAYGTLRSEHGVHRLVR 197

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+ +RR TSF+ + V P V+ S  ++I E + RID +R+SG GGQ VNTTDSAVRI
Sbjct: 198 ISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQGVNTTDSAVRI 257

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +             ++ +G QI
Sbjct: 258 THLPTGIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGGPQDVSFGSQI 317

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           R+YVL PYQMVKDLRT +E ++   VL
Sbjct: 318 RNYVLHPYQMVKDLRTEVETSNTGAVL 344


>gi|255530197|ref|YP_003090569.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
 gi|255343181|gb|ACU02507.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 140/288 (48%), Positives = 200/288 (69%), Gaps = 7/288 (2%)

Query: 66  LCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           L D L+L +  L+  D +   +QE  D   +   ++E K   ++L  + D   A +++ A
Sbjct: 72  LEDTLVLFDF-LQSGDATEEEMQEQYDACLKAIEDLELK---NMLKSKEDQLPAVMQITA 127

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA ML+RMY  W EK  +K    +  +GE AG+KS TL   G  AYG+LKG
Sbjct: 128 GAGGTESCDWAYMLMRMYMMWGEKNGYKITEQDYQEGEIAGVKSVTLQFSGDFAYGYLKG 187

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DSN+RRHTSF+S++VYP+VDD+IEIE+ +S+   +T+R+ GAGGQ+V
Sbjct: 188 ENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQNV 247

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++AVR+ H P+G++++ Q+ RSQ +NK  A  +L+++LYE E++KR E   + E +K
Sbjct: 248 NKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKRMEATALIEGNK 307

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +I WG QIRSYVL   + VKD RTN + ++P  VLDG+L+DF+KA L
Sbjct: 308 KKIEWGSQIRSYVLDD-RRVKDHRTNFQSSNPQAVLDGELNDFLKAYL 354


>gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
 gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
          Length = 291

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/281 (50%), Positives = 201/281 (71%), Gaps = 5/281 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLEL   E D S+LQE   NL ++  E++  + + LLSG  D+  A L ++AGAGGT++Q
Sbjct: 3   LLEL---ETDESLLQEAYTNLSQLSRELDQWELQQLLSGPYDAGGAVLTINAGAGGTDAQ 59

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMYTRW E++ +K    EI +G+EAG+KSATL I G  AYG+L+ E+G HRLV
Sbjct: 60  DWAEMLLRMYTRWGERQGYKVHLAEISEGDEAGLKSATLEIVGRYAYGYLRSEKGTHRLV 119

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P++D S+E++I E D  + T RA G GGQ+VN  ++AVR
Sbjct: 120 RISPFNANDKRQTSFAGVEVMPILDRSVELDIPEKDLEVTTSRAGGKGGQNVNKVETAVR 179

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           I H+PTG+ V+C +ERSQ +NK +A  +L+AKL  +  ++R +EIA I      E  WG 
Sbjct: 180 IVHLPTGLAVRCTEERSQLQNKEKALVLLKAKLLVVAREQRAKEIAEI-RGDMVEAAWGN 238

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRT +E T+ +DV++G+L+ F++A L
Sbjct: 239 QIRNYVFHPYQMVKDLRTGVETTAIADVMNGELEPFIQAYL 279


>gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
 gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
          Length = 382

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/338 (42%), Positives = 217/338 (64%), Gaps = 7/338 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEED 80
           L+ L  +  DP  W+   +A+ ++ E   + + ++  K  + ++ D   ++EL   +E  
Sbjct: 39  LADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFRAKVDDAQCIVELLEEMESP 98

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D ++  E ++ +  I   ++  +   LLSG  D   A + + AGAGGT++QDWA MLLRM
Sbjct: 99  DAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITITAGAGGTDAQDWAEMLLRM 158

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWA +  FK+  +E   GEEAGIKSATL I G  AYG++ GE+G HRLVR SP++S  
Sbjct: 159 YQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQSPFNSKG 218

Query: 201 RRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R TSF+ + V P++++S IE+EI E D  I T R+ G GGQ+VN  ++AVR+THIPTG+
Sbjct: 219 LRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGGQNVNKVETAVRVTHIPTGI 278

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVL 317
            ++C +ERSQ +NK +A  +L++KL   LE Q+  EI  I G+  K E  WG+QIR+YV 
Sbjct: 279 ALRCSEERSQLQNKIKAIALLKSKLLVILEDQRAAEIKEIRGDVVKAE--WGQQIRNYVF 336

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            PY++VKDLRTN+E +  S ++DG+L+  + A L  K+
Sbjct: 337 HPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSKQ 374


>gi|328752610|gb|EGF66226.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2]
          Length = 370

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWGDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T++ + +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341


>gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
 gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
          Length = 358

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 150/340 (44%), Positives = 219/340 (64%), Gaps = 3/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD       +  L      P  W +   A+  ++E   L + +   +    +L D   + 
Sbjct: 12  FDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTKAIA 71

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   EDD ++ QE  +N+ ++   ++  + + LLSG  D+  A L ++AGAGGT++QDW
Sbjct: 72  ELLELEDDTTLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGTDAQDW 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRW E++ +K +  E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRLVRI
Sbjct: 132 AQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+++N +R TSF+ + V P + +D +++EI + D  I T R+ G GGQ+VN  ++AVR+
Sbjct: 192 SPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETAVRV 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +EIA I      +  WG Q
Sbjct: 252 VHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEI-RGDMVDAAWGNQ 310

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRTNIE T  + V+DG LD F++A L
Sbjct: 311 IRNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYL 350


>gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
 gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
          Length = 396

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 207/331 (62%), Gaps = 3/331 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           +++ L  +   P LW +   A+ +             + E   RL D   L  L +EE+D
Sbjct: 51  KIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTEAGQRLDDIDTLYSLGMEEED 110

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
               QE    L+++  ++   + ++LL GE D+  A + + +GAGG ++ DWA ML+RMY
Sbjct: 111 EDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTIRSGAGGVDAADWAQMLMRMY 170

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE+ ++K + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+NSR
Sbjct: 171 IRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKLSVEGGTHRLVRISPFDNNSR 230

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF+++ V P+V+ +  I++ +SD R+DTY + G GGQ VNTT SAVR+TH+PTG+VV
Sbjct: 231 RQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQGVNTTYSAVRLTHLPTGIVV 290

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPY 320
             Q ERSQ +N+A A  +L+++L  L L++ EE A   E +   +  WG Q+RSYVL PY
Sbjct: 291 TMQDERSQIQNRAAAMAVLQSRL--LVLKQEEEAAKKKELAGDIKASWGDQMRSYVLHPY 348

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QMVKDLRT  E + P  V DGD+D F+ A +
Sbjct: 349 QMVKDLRTGYETSDPQAVFDGDIDGFIDAGI 379


>gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
 gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
          Length = 366

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 145/337 (43%), Positives = 216/337 (64%), Gaps = 7/337 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEED 80
           L+ L  +  DP  W+   +A+ ++ E   + + ++  K  + ++ D   ++EL   +E  
Sbjct: 32  LADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFRAKVDDAQCIVELLEEMESP 91

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D ++  E ++ +  I   ++  +   LLSG  D   A + + AGAGGT++QDWA MLLRM
Sbjct: 92  DAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITITAGAGGTDAQDWAEMLLRM 151

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWA +  FK+  +E   GEEAGIKSATL I G  AYG++ GE+G HRLVR SP++S  
Sbjct: 152 YQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQSPFNSKG 211

Query: 201 RRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R TSF+ + V P++++S IE+EI E D  I T R+ G GGQ+VN  ++AVR+THIPTG+
Sbjct: 212 LRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGGQNVNKVETAVRVTHIPTGI 271

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVL 317
            ++C +ERSQ +NK +A  +L++KL   LE Q+  EI  I G+  K E  WG+QIR+YV 
Sbjct: 272 ALRCSEERSQLQNKIKAIALLKSKLLVILEEQRAAEIKEIRGDVVKAE--WGQQIRNYVF 329

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PY++VKDLRTN+E +  S ++DG+L+  + A L  K
Sbjct: 330 HPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSK 366


>gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis]
          Length = 458

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 144/339 (42%), Positives = 218/339 (64%), Gaps = 7/339 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q ++ L +K  +   W +   A+  +     + + I  + E + ++ D   +++L  E D
Sbjct: 114 QEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFKTKVEDAETIVKLTEEMD 173

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D  +L+E S  ++ +   +E  +   LLSG  D   A + + AGAGGT++QDWA+MLL
Sbjct: 174 SIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISITAGAGGTDAQDWADMLL 233

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT  +E   GEEAGIKSA + ++G  AYG+L GE+G HR+VR SP+++
Sbjct: 234 RMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYLSGEKGTHRIVRQSPFNA 293

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS I V P++ ++S+++E+ E D  I   RA G GGQ+VN  ++AVRITHIPT
Sbjct: 294 KGLRQTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 353

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSY 315
           GV V+C +ERSQ  NK +A + L+AKL  + +++R  EI  I G++ K E  WG+QIR+Y
Sbjct: 354 GVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKAE--WGQQIRNY 411

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           V  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 412 VFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLKYK 450


>gi|313764090|gb|EFS35454.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1]
 gi|314914951|gb|EFS78782.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4]
          Length = 370

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQGAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T++ + +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341


>gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614]
 gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp.
           JS614]
          Length = 375

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 148/350 (42%), Positives = 207/350 (59%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   ++ +  + D +     ++ L  +   P LW +   A  +      L   +     
Sbjct: 15  QLQATMHTIEQVLDLETMRAEIADLGEQVAAPDLWDDQDNATRVTGRLSALQGELDRFTA 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D  I++E+A EE D   L E    L R+K  VE  +  +LLSGE D+ +A + +
Sbjct: 75  LQGSVDDLAIMVEMAQEEGDADALAEAEAELGRLKRSVEALEVRTLLSGEYDAREAIVTI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML+RMYTRWAE+ K+  E  ++   EEAGIKSA   I  P AYG L
Sbjct: 135 RSGAGGVDAADFAEMLMRMYTRWAEQHKYPVEVFDVSYAEEAGIKSAEFAIHAPYAYGTL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EIEI E+D R D +R+ G GGQ
Sbjct: 195 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIRTDVFRSGGPGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  ++       + +  E        
Sbjct: 255 SVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKASAM-VVLKAKLLAKKKAEEAALKKDLK 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                 WG Q+R+YVL PYQMVKDLRT  E  +P  V DGD+DDF++A +
Sbjct: 314 GDVAAAWGDQMRNYVLNPYQMVKDLRTGYEVGNPQSVFDGDVDDFIEAGI 363


>gi|225011020|ref|ZP_03701485.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
 gi|225004825|gb|EEG42782.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
          Length = 288

 Score =  276 bits (706), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 137/278 (49%), Positives = 193/278 (69%), Gaps = 8/278 (2%)

Query: 77  LEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           + ED+  I  Q T D L+ +       +F ++LS E D+  A L++ AGAGGTES DWA 
Sbjct: 10  ITEDELKIAYQNTLDVLEDL-------EFRNMLSEEGDNLSAVLQITAGAGGTESCDWAA 62

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           ML+RMY  W++K  FK + L   +G+ AG+K+ TL I+G  A+GWLKGE GVHRLVRISP
Sbjct: 63  MLMRMYMMWSQKAGFKIKELNYQEGDVAGVKTVTLGIEGDFAFGWLKGENGVHRLVRISP 122

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +DSN++RHTSF+S++VYP++DDSIEI I+ +D      R+ GAGGQ+VN  ++ V +TH 
Sbjct: 123 FDSNAKRHTSFASVYVYPLIDDSIEIVINPADISWAFARSGGAGGQNVNKVETKVILTHH 182

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+++   + RSQ  N+  A  +L+++LYE+EL+KR+E  +  ESSK +I WG QIR+Y
Sbjct: 183 PTGIIIHNSETRSQLDNRENAMKLLKSQLYEIELRKRQEARSEIESSKMKIEWGSQIRNY 242

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           VL PY++VKD+R+  E      VLDG LD F+K  L +
Sbjct: 243 VLHPYKLVKDVRSGTETGDVDAVLDGHLDPFLKGFLML 280


>gi|222624780|gb|EEE58912.1| hypothetical protein OsJ_10554 [Oryza sativa Japonica Group]
          Length = 356

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 146/333 (43%), Positives = 199/333 (59%), Gaps = 35/333 (10%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           W   ++R   L+   E P LW + + A  + RE   L   I  + + +  L +++ +L L
Sbjct: 46  WGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRL 105

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A EEDD  +  ET                                V AGAGGTES DWA 
Sbjct: 106 AREEDDNEL--ET--------------------------------VQAGAGGTESMDWAA 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K E GVHRLVRISP
Sbjct: 132 MVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           +DS  RRHTSF+++ V P++ D S   +I +SD RI+ +R+ G GGQH N T+SAVRI H
Sbjct: 192 FDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRIVH 251

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S +EI WG QIRS
Sbjct: 252 IPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQIRS 311

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           YVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 312 YVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 344


>gi|327329965|gb|EGE71719.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1]
          Length = 370

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 143/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T++ + +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIK+AT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKAATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
                WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341


>gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 330

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 214/321 (66%), Gaps = 3/321 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N   A+  ++E     +++   +   ++L D   ++EL   E D ++L+E +DN+
Sbjct: 5   PTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLELESDRALLEEATDNI 64

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++ +++  + + LL+G  D   A L ++AGAGGT++QDW  MLLRMY+RWAEK+ +K 
Sbjct: 65  THLQHDLDRWELQQLLNGPYDPKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              EI +G+EAGIKS T+ I G  AYG+LKGE+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184

Query: 213 PVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P++ DD + +EI + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C QERSQ +
Sbjct: 185 PILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244

Query: 272 NKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK +A  +L+AKL  +   Q+ + IA I      E  WG QIR+YV  PYQ+VKDLR+N+
Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEI-RGDMVEAAWGNQIRNYVFHPYQLVKDLRSNV 303

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E T  + V++GDLD F++A L
Sbjct: 304 ETTDVTGVMNGDLDSFIEAYL 324


>gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
 gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
          Length = 358

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 147/341 (43%), Positives = 222/341 (65%), Gaps = 3/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD       +  L      P  W     A+  +++   L + +   ++  ++L D   +
Sbjct: 11  IFDLPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTEAI 70

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            EL   EDD ++ +E  +N+ ++   ++  + + LLSG  D+  A L ++AGAGGT++QD
Sbjct: 71  AELLELEDDTTLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQD 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRW E++ +K    E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRLVR
Sbjct: 131 WAQMLLRMYTRWGEQQGYKVNLTELSEGDEAGIKSATLEIEGCYAFGYLKGEKGTHRLVR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           ISP+++N +R TSF+ + V P++ +D ++++I + D  I T R+ G GGQ+VN  ++AVR
Sbjct: 191 ISPFNANGKRQTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           I H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +EIA I      E  WG 
Sbjct: 251 IVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEI-RGDMVEAAWGN 309

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRTN+E T  + V+DG+LD F++A L
Sbjct: 310 QIRNYVFHPYQMVKDLRTNVETTDVTGVMDGNLDSFIEAYL 350


>gi|327403921|ref|YP_004344759.1| peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM
           16823]
 gi|327319429|gb|AEA43921.1| bacterial peptide chain release factor 2 (bRF-2) [Fluviicola
           taffensis DSM 16823]
          Length = 360

 Score =  276 bits (705), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 215/329 (65%), Gaps = 11/329 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDDCSI 84
           KT+DP+ W +  +A+  M++ + L   I     ++ +  D  +L+E     A EE +C  
Sbjct: 36  KTQDPNFWDDPKKAEAEMKDIRGLKFWIESYTRLKSQSDDLEVLIEFVKEGAAEESECD- 94

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
                +  Q +   +E  + +++LSGE D+  A +++ AGAGGTE+ DWA ML+RMY  W
Sbjct: 95  -----EAYQSMLTTIEEVELKNMLSGEEDALSAVIQITAGAGGTEACDWAGMLMRMYIMW 149

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEK  +K + L   +G+ AGIK+ TL I+G  A+G+LKGE G+HRLVR+SPY+S  +R T
Sbjct: 150 AEKSGYKVKELNFQEGDVAGIKTVTLEIEGEFAFGYLKGENGIHRLVRVSPYNSQGKRMT 209

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S++VYP VDD+IEI ++ +D   +T+R+ GAGGQ+VN  ++AVR+ H  +G++++  
Sbjct: 210 SFASVYVYPSVDDTIEIYVNPADITFETFRSGGAGGQNVNKVETAVRLRHAASGIIIENS 269

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           + RSQ  NK +A  +LR++LYE+EL+KR E  +  E+ K +I WG QIRSYVL   + VK
Sbjct: 270 ESRSQLANKEKAMQLLRSQLYEIELRKRAESRDQIEAGKKKIEWGSQIRSYVLDD-RRVK 328

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           D RT+     P  VLDGDL  F+K+ L +
Sbjct: 329 DHRTDYSVNDPDKVLDGDLLPFLKSFLMM 357


>gi|328955235|ref|YP_004372568.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
 gi|328455559|gb|AEB06753.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
          Length = 383

 Score =  276 bits (705), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 146/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +R+  L  ++  P  W +   A+ +M E     + +S ++  + RL D +  L+LA
Sbjct: 30  DEKRERIVELEQRSARPDFWDDGERARAVMEELSCARDDVSGVERARTRLADAVAALQLA 89

Query: 77  --LEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQD 132
             LE  D +            +L  E  Q E  S  +GE D   A + +  G GG E+QD
Sbjct: 90  SELEHGDEADELAAEATAAASELTREIDQMELSSWFTGEFDHGSAIITIKPGQGGLEAQD 149

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML +MY ++ E+R +K    +    +  GI  AT  ++G +A+G L+ E GVHRLVR
Sbjct: 150 WTFMLFKMYMKYCERRGWKVTVNDCPPADVIGIDRATFTVEGKDAFGMLRAEAGVHRLVR 209

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP D   RR T+F+ + V PV+ D I++EI  +D R+D Y ASG GGQ VNTTDSAVR+
Sbjct: 210 ISPTDDKKRRQTTFAGVEVIPVLPDDIDVEIDPTDIRVDVYHASGPGGQGVNTTDSAVRV 269

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV CQ ERSQ +NKA    +L+++L+ELEL+KREE  +     K  IG+G QI
Sbjct: 270 THLPTGIVVTCQNERSQIQNKAACMQILKSRLFELELEKREEALDEIRGPKHTIGFGNQI 329

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
           RSYVL PYQMVKDLR+ +E  + + VL DGDLD F+
Sbjct: 330 RSYVLYPYQMVKDLRSGVETGNVASVLEDGDLDPFI 365


>gi|311743767|ref|ZP_07717573.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
 gi|311312897|gb|EFQ82808.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
          Length = 371

 Score =  276 bits (705), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 152/350 (43%), Positives = 217/350 (62%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  +  + D D   + ++ L  +   P LW +   A+ +      L   +  +  +
Sbjct: 13  LDQTLTSVEKVLDLDAMRKEIAELQEQVGAPDLWDDQANAQRVTGRLSVLQAEVDKVTGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L E+ALEE D + + + +  L R+   +E  +  +LLSGE D  DA + + 
Sbjct: 73  RQRLDDLELLHEMALEEGDDASVADAAAELVRVHKSIEALEVRTLLSGEYDMRDALVSIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A ML RMY RWAE+  +  E  ++   EEAG+KS T  +K P AYG L 
Sbjct: 133 SGAGGVDAADFALMLQRMYIRWAERHGYTVEIYDVSYAEEAGLKSTTFAVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF++I V PV++ + EI++ + + R+D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAAIEVVPVLEQTDEIDVPDEEIRVDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A  M+  K   L L+K EE A++ E  
Sbjct: 253 VNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKASA--MVILKAKLLALKKAEERAHLDELR 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +  WG Q+R+YVL PYQMVKDLRT  E  +   VLDG++DDF++A +
Sbjct: 311 GDVQASWGDQMRNYVLNPYQMVKDLRTEHESGNTQGVLDGEIDDFIEAGI 360


>gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A]
 gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium
           UCYN-A]
          Length = 344

 Score =  276 bits (705), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 3/328 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L   T  P+ W N   A+ + +E  +  + +    +  ++L D  I+++L + ++D S+L
Sbjct: 11  LENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLLILDNDKSLL 70

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  +N+ ++K  ++    + LLSG  D   A L ++ G GGT++QDW+ MLLRMY RW 
Sbjct: 71  EEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQDWSEMLLRMYRRWG 130

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +K   +EI +G+EAGIKSATL  +G  A+G+LKGE+G HRLVRISP+++N +R TS
Sbjct: 131 ESQGYKVNLVEISEGDEAGIKSATLEFEGCYAFGYLKGEKGTHRLVRISPFNANGKRQTS 190

Query: 206 FSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           F+ I V P ++ + I++EI + D  I T R+ G GGQ+VN  ++AVRI H+PTG+ V+C 
Sbjct: 191 FTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHLPTGISVRCT 250

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           QERSQ +NK +A  +L+AKL  +  ++R ++IA I      E  WG QIRSYV  PYQMV
Sbjct: 251 QERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEI-RGDIVEAAWGNQIRSYVFHPYQMV 309

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KDLRTN+E T+ +DV+DGDL  F++A L
Sbjct: 310 KDLRTNVETTNINDVMDGDLGLFIEAYL 337


>gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
 gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
          Length = 355

 Score =  275 bits (704), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 138/280 (49%), Positives = 190/280 (67%), Gaps = 2/280 (0%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL   E D  +L E +  LQ +K  ++  + E LLSG  D   A + ++AGAGGT++QD
Sbjct: 65  LELYDLEPDEELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I G  AYG+L+ E+G HRLVR
Sbjct: 125 WALMLMRMYTRWAEDHGMKVSVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +++ ++++I + D  + T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            H+PTG+ V+C QERSQ +NK +A  +L AKL  +  ++R  EIA+I      E  WG Q
Sbjct: 245 LHVPTGLAVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADI-RGDIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRT +E T    V+DGDLD F++A L
Sbjct: 304 IRNYVFHPYQMVKDLRTAVETTDVQGVMDGDLDPFIQALL 343


>gi|148657451|ref|YP_001277656.1| peptide chain release factor 2 [Roseiflexus sp. RS-1]
 gi|148569561|gb|ABQ91706.1| bacterial peptide chain release factor 2 (bRF-2) [Roseiflexus sp.
           RS-1]
          Length = 317

 Score =  275 bits (703), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   +  I+ I  +L     L+ELA  EDD S+  + +  L+R    +E  + E
Sbjct: 1   MQRLTRLKEEVERIEAIDRQLTALADLIELAAAEDDDSLQADIAAELKRTGEAIEALEIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL+G  D  DA+L + AG GGT++QDWA MLLRMY RW E+R F+   ++  +GEEAGI
Sbjct: 61  VLLNGPYDDRDAFLSIKAGTGGTDAQDWAEMLLRMYMRWGERRGFQVALIDKSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ ++GP AYG  K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I  
Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRA 282
            D RID +R+SG GGQ VNTTDSAVRIT+    P  +VV CQ ERSQ +N+  A  +LR 
Sbjct: 181 EDIRIDVFRSSGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240

Query: 283 KLYELELQ-KREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +L E ELQ KREE A + GE  + +  +G Q+R+Y L PY +VKD RT+ E +    VLD
Sbjct: 241 RLLERELQRKREERARLRGEYRQAD--FGNQMRTYYLHPYTLVKDHRTDHETSDVHAVLD 298

Query: 341 GDLDDFMKATL 351
           GD+D F++A L
Sbjct: 299 GDIDPFIEAYL 309


>gi|153814569|ref|ZP_01967237.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|317501267|ref|ZP_07959471.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|145848063|gb|EDK24981.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|316897334|gb|EFV19401.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 316

 Score =  275 bits (703), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 216/307 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L +++  I+++     D ++L+E++ EED     +E  + LQ+ +   E  +  
Sbjct: 1   MKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEEELQQFEETFEELRIG 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+G  D ++A + +HAGAGGTES DW  ML RMYTRWAEK+ +  E L+  +G+ AG+
Sbjct: 61  TLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGYSIEELDYLEGDVAGV 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  +KG NAYG+L+ E+GVHRLVRISP++S  +R TSF+S  V P +++ I+IEI++
Sbjct: 121 KGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEEDIDIEIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQH NK +A  ML++KLY
Sbjct: 181 DDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       +I +G QIRSYV+QPY MVKD RTN E ++   V+DG++D 
Sbjct: 241 LMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTNAEVSNVGGVMDGNIDP 300

Query: 346 FMKATLA 352
           F+ A L+
Sbjct: 301 FINAYLS 307


>gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
 gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
          Length = 330

 Score =  275 bits (703), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 141/249 (56%), Positives = 181/249 (72%), Gaps = 1/249 (0%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E +L    D  +A L +HAG GGT++QDW  +LLRMY RWAE++ ++ + L+I  GEE
Sbjct: 73  EIEMVLQDPHDEANAVLSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKILDISPGEE 132

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIKSATLLI+G  AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P + +S  IE
Sbjct: 133 AGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPELPEST-IE 191

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   D +I+T+RA GAGGQHVN  +SAVRITHIPTG+VVQCQ ERSQH NK  A  +L+A
Sbjct: 192 IKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEMALRVLKA 251

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L ELE +KR E     +    EI WG QIRSYV  PY +VKD RT +E  +   V+DG+
Sbjct: 252 RLEELEERKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNVQAVIDGE 311

Query: 343 LDDFMKATL 351
           +D F++A L
Sbjct: 312 IDPFIEAYL 320


>gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
          Length = 453

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 221/349 (63%), Gaps = 10/349 (2%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            GL   D   Q L+ L +K  D   W +  +A+ ++     + + I  + + + ++ +  
Sbjct: 101 AGLLQLD---QELADLESKAADNSFWDDRSKAQKVLMAMTDVKDKIKMLTDFKTQVEEAE 157

Query: 71  ILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +++L  E D  D  +L+E +  ++ +   ++  +   LLSG  D   A + + AGAGGT
Sbjct: 158 TIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSELLSGPYDKEGAVISISAGAGGT 217

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ I+G  AYG++ GE+G H
Sbjct: 218 DAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYISGEKGTH 277

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           R+VR SP++S   R TSFS + V P++ D+S+ +E+ E D  I   RA G GGQ+VN  +
Sbjct: 278 RIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKVE 337

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTE 305
           +AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  + E Q+  EI  I G++ K E
Sbjct: 338 TAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE 397

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             WG+QIR+YV  PY++VKD+RT  E +    V+DG+L+ F+KA L  K
Sbjct: 398 --WGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFIKAYLKYK 444


>gi|317061399|ref|ZP_07925884.1| peptide chain release factor 2 [Fusobacterium sp. D12]
 gi|313687075|gb|EFS23910.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 331

 Score =  275 bits (702), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 152/273 (55%), Positives = 198/273 (72%), Gaps = 9/273 (3%)

Query: 88  TSDNLQRIKLEVEYKQF----ES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D   +++LE ++KQ     ES     LL GE D N+A + +H+GAGGTE+ DWA+ML 
Sbjct: 53  AGDESSQVELEEKHKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLY 112

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW   +K+K E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+
Sbjct: 113 RMYTRWCHDKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDA 172

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +RHTSF+S+ V P VD+S+E+E+  +D RIDTYRASGAGGQH+N TDSAVRITH PTG
Sbjct: 173 NKKRHTSFASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTG 232

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ+ERSQ  N+  A  ML++KL ELEL+K+EE     +  ++EIGWG QIRSYV Q
Sbjct: 233 IVVTCQKERSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQ 292

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY MVKD RT +E  +   V+DGDLD+FM   L
Sbjct: 293 PYTMVKDHRTGVEVGNIKAVMDGDLDEFMNGYL 325


>gi|257463869|ref|ZP_05628255.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 326

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/273 (55%), Positives = 198/273 (72%), Gaps = 9/273 (3%)

Query: 88  TSDNLQRIKLEVEYKQF----ES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D   +++LE ++KQ     ES     LL GE D N+A + +H+GAGGTE+ DWA+ML 
Sbjct: 48  AGDESSQVELEEKHKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLY 107

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW   +K+K E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+
Sbjct: 108 RMYTRWCHDKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDA 167

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +RHTSF+S+ V P VD+S+E+E+  +D RIDTYRASGAGGQH+N TDSAVRITH PTG
Sbjct: 168 NKKRHTSFASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTG 227

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ+ERSQ  N+  A  ML++KL ELEL+K+EE     +  ++EIGWG QIRSYV Q
Sbjct: 228 IVVTCQKERSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQ 287

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY MVKD RT +E  +   V+DGDLD+FM   L
Sbjct: 288 PYTMVKDHRTGVEVGNIKAVMDGDLDEFMNGYL 320


>gi|320531255|ref|ZP_08032234.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136522|gb|EFW28491.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 373

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/358 (41%), Positives = 221/358 (61%), Gaps = 6/358 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE+     +  ++    L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAEADLSAISKDLSELEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+ ++  + L     EEAG+KS T  I  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEIHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L L+++EE A  
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308

Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            E +   +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
 gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
          Length = 330

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 141/249 (56%), Positives = 181/249 (72%), Gaps = 1/249 (0%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E +L    D  +A L +HAG GGT++QDW  +LLRMY RWAE++ ++ + L+I  GEE
Sbjct: 73  EIEMILQDPHDEANAILSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKILDISPGEE 132

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIKSATLLI+G  AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P + +S  IE
Sbjct: 133 AGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPELPEST-IE 191

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   D +I+T+RA GAGGQHVN  +SAVRITHIPTG+VVQCQ ERSQH NK  A  +L+A
Sbjct: 192 IRPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEMALRVLKA 251

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L ELE +KR E     +    EI WG QIRSYV  PY +VKD RT +E  +   V+DG+
Sbjct: 252 RLEELEEKKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNVQAVIDGE 311

Query: 343 LDDFMKATL 351
           +D F++A L
Sbjct: 312 IDPFIEAYL 320


>gi|328949576|ref|YP_004366911.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
 gi|328449900|gb|AEB10801.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
          Length = 367

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/350 (44%), Positives = 220/350 (62%), Gaps = 7/350 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ L G  D     +RL+ L  +  DP+LW +   A+ + +E   +   +   + +
Sbjct: 6   LEARLDALRGYLDIPAKERRLAELEAELNDPNLWNDAERARRISQEAARIRRTVETYRTL 65

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L + L+ L   L+ ++   L   ++  Q+ KLE  Y   E+LL+      +A L + 
Sbjct: 66  EADL-EGLVELWNELDPEEREALAGEAEEAQK-KLEALY--HETLLTFPHAEKNAILTIQ 121

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMY R A++  F  E +++  G EAGI  A ++++G NAYG L 
Sbjct: 122 PGAGGTEACDWAEMLLRMYRRLADRLGFSVEVVDVTPGAEAGIDYAQIIVRGENAYGLLS 181

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+EI   D RID +R+ G GGQ 
Sbjct: 182 VENGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVEIKPEDLRIDVFRSQGHGGQG 241

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           VNTTDSAVRI H+PTG++V CQ  RSQHKNK  A  +L+++L++LE +K+ EE+A +   
Sbjct: 242 VNTTDSAVRIVHLPTGIIVTCQNTRSQHKNKEIALKVLKSRLFQLEWKKKQEELAKLRGE 301

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K  I WG QIRSYVL   Q VKD RT + +  P +VLDGD++DF+ A L
Sbjct: 302 VKP-IEWGSQIRSYVLDK-QYVKDHRTGLMRHDPQNVLDGDIEDFIWAGL 349


>gi|87309088|ref|ZP_01091225.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
 gi|87288079|gb|EAQ79976.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
          Length = 332

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/319 (47%), Positives = 213/319 (66%), Gaps = 2/319 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N   A+ ++ + + L + +  ++     + D   +LE+A EEDD S   E    +
Sbjct: 4   PDFWDNQEIAQTVVGQLKSLKSILEPLEACAAAVGDLDAMLEMA-EEDD-SFDAEAKAEV 61

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            R++ E++  + ++LL+G+ D+  A + +HA  GGT++ DWA MLLRMY+ WA +  +  
Sbjct: 62  ARLEAELDQLELKALLNGQHDACGALVSIHARDGGTDANDWAEMLLRMYSHWAAEHDYTV 121

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E ++  D EEAGI SAT  ++G  AYG+LKGE G+HRLVRISP++S  +R TSF+++ V 
Sbjct: 122 ELIDRADNEEAGINSATFAVRGVMAYGYLKGESGMHRLVRISPFNSEGKRQTSFAAVDVS 181

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P + DS E+EI E D RIDTYRASGAGGQHVN TDSA+R+TH+PTGVVVQCQ ERSQHKN
Sbjct: 182 PEIPDSEEVEIDEEDVRIDTYRASGAGGQHVNKTDSAIRLTHLPTGVVVQCQNERSQHKN 241

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +AQAW MLR+++  +E ++RE        ++ ++G+G QIR+Y L P Q VKD RT    
Sbjct: 242 RAQAWKMLRSRIARIEEERREAEEAARYKTQAKVGFGSQIRNYFLHPDQRVKDARTGHYV 301

Query: 333 TSPSDVLDGDLDDFMKATL 351
            S   V+DGD+  F+ A L
Sbjct: 302 GSFHAVMDGDIQGFLDAYL 320


>gi|225430898|ref|XP_002276037.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 454

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/339 (42%), Positives = 219/339 (64%), Gaps = 7/339 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + L+ L  K  D   W +  +A+  +     + + I  + + + ++ D   +++L  E D
Sbjct: 109 EELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKLTEEMD 168

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D  +L+E ++ ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLL
Sbjct: 169 SIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLL 228

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP+++
Sbjct: 229 RMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSPFNA 288

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS + V P++ ++S+++EI E D  I   RA G GGQ+VN  ++AVRITHIPT
Sbjct: 289 KGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 348

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315
           GV V+C +ERSQ  NK +A + L+AKL  + E Q+  EI  I G++ K E  WG+QIR+Y
Sbjct: 349 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNY 406

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           V  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 407 VFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 445


>gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
          Length = 305

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 138/267 (51%), Positives = 192/267 (71%), Gaps = 2/267 (0%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE   N+ ++  E++  + E LLSG  D+N A L ++AGAGGT++QDWA MLLRMYTRWA
Sbjct: 33  QEAQTNVVKLNRELDRWELEQLLSGPYDANGAVLAINAGAGGTDAQDWAEMLLRMYTRWA 92

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +K +  E  +G+EAGIKSATL I+G  AYG+LK E+G HRLVRISPY++N +R TS
Sbjct: 93  ENQGYKVQLAEFSEGDEAGIKSATLEIQGLRAYGYLKAEKGTHRLVRISPYNANGKRQTS 152

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+ + V P++++ ++++I E+D  I T R+ G GGQ+VN  ++AVR+ HIPT + V+C Q
Sbjct: 153 FAGVEVMPILNEDVDLDIPETDLEITTSRSGGKGGQNVNKVETAVRVKHIPTDIAVRCTQ 212

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ +NK +A  +L+AKL  +  ++R +EIA I      E  WG QIR+YV  PYQ+VK
Sbjct: 213 ERSQLQNKEKALALLKAKLLVIAQEQRAQEIAEI-RGDMVEAAWGNQIRNYVFHPYQLVK 271

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           DLRTN+E T   DVL+G LD F++A L
Sbjct: 272 DLRTNVETTGVDDVLNGTLDPFIEAYL 298


>gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/339 (42%), Positives = 219/339 (64%), Gaps = 7/339 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + L+ L  K  D   W +  +A+  +     + + I  + + + ++ D   +++L  E D
Sbjct: 106 EELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKLTEEMD 165

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D  +L+E ++ ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLL
Sbjct: 166 SIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLL 225

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP+++
Sbjct: 226 RMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSPFNA 285

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS + V P++ ++S+++EI E D  I   RA G GGQ+VN  ++AVRITHIPT
Sbjct: 286 KGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 345

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315
           GV V+C +ERSQ  NK +A + L+AKL  + E Q+  EI  I G++ K E  WG+QIR+Y
Sbjct: 346 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNY 403

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           V  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 404 VFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 442


>gi|139438906|ref|ZP_01772366.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
 gi|133775617|gb|EBA39437.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
          Length = 382

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/331 (44%), Positives = 201/331 (60%), Gaps = 5/331 (1%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--- 78
           R+S L  K+  P  W +   A+  M E       I+ +   +  L D    LELA E   
Sbjct: 34  RVSELEAKSVAPGFWDDADAARATMEEIARTKEDIAAVDTARGELSDARAALELAEEMGD 93

Query: 79  -EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
             D  ++ +E +   +R+   ++  +  S  +GE D  DA + +  G GG E+QDW  ML
Sbjct: 94  DPDAAALREEAAATAERLARAIDELELSSWFTGEFDHGDAIVTIKPGQGGLEAQDWTFML 153

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            +MY ++ ++R +K    +    E  GI  AT  ++G +A+G L+ E GVHRLVRISP D
Sbjct: 154 FKMYMKYCQRRGWKVTINDCPAAEVIGIDRATFTVEGKDAFGMLRAEAGVHRLVRISPTD 213

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              RR T+F+ + V PV+ D I+IEIS  D R+D Y ASG GGQ VNTTDSAVR+TH P+
Sbjct: 214 DKRRRQTTFAGVEVIPVLPDDIDIEISPDDIRVDVYHASGPGGQGVNTTDSAVRVTHFPS 273

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VV CQ ERSQ +NKA    +L+A+LYE+EL+KR E  +     KT IG+G QIRSYVL
Sbjct: 274 GIVVTCQNERSQIQNKAACMQILKARLYEIELEKRAEALDEIRGPKTTIGFGNQIRSYVL 333

Query: 318 QPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
            PYQMVKDLR+ +E ++   VL DGDLD F+
Sbjct: 334 YPYQMVKDLRSGVETSNVEAVLDDGDLDPFV 364


>gi|229032803|ref|ZP_04188759.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
 gi|228728476|gb|EEL79496.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
          Length = 272

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 142/269 (52%), Positives = 183/269 (68%), Gaps = 2/269 (0%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W +   A+ ++ E   L   +   +++ +   +  I  EL  EE D  + +E    ++ 
Sbjct: 6   FWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E 
Sbjct: 66  LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P 
Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+ 
Sbjct: 186 FNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSK 303
            A  ML+AKLY+ +L+  E+ A + E+S+
Sbjct: 246 HAMKMLKAKLYQKKLE--EQQAELDENSR 272


>gi|294507807|ref|YP_003571865.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
 gi|294344135|emb|CBH24913.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
          Length = 349

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/333 (44%), Positives = 214/333 (64%), Gaps = 8/333 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           LN +  DP  W +   A+ + +     +  I   ++++++  +++  L+L  EE+   + 
Sbjct: 6   LNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWEDVKEQ-AEDIETLQLLSEEEGEDMS 64

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E     +R++ +++  + ESLL    D  DA +E++ GAGGTESQDWA MLLRMY RWA
Sbjct: 65  DEIDAEARRLEQKLDRLELESLLDDPDDERDAIVEINPGAGGTESQDWAEMLLRMYMRWA 124

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +  E +    GEEAGIKSATL ++G +AYG LK E GVHRLVRISP+D++SRRHTS
Sbjct: 125 EDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRLKSETGVHRLVRISPFDADSRRHTS 184

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-------PTG 258
           F+S++VYP VDDSI +++SE +  + T+R+ G GGQHVN  ++ VR+           T 
Sbjct: 185 FASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQHVNKVETGVRLIWTGTLSNGEETT 244

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           V   C QERSQH+N+ +A  ML++++Y+ E + +EE     ESSK  I WG QIRSYVL 
Sbjct: 245 VRAACTQERSQHQNRRRAREMLKSRIYQAERELKEEEKERLESSKKSIEWGSQIRSYVLH 304

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PY+MV D RT+ ++     VL+G LD F+KA L
Sbjct: 305 PYKMVNDHRTDTKRNDAEAVLEGGLDPFIKAYL 337


>gi|257063623|ref|YP_003143295.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
 gi|256791276|gb|ACV21946.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
          Length = 369

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 207/326 (63%), Gaps = 4/326 (1%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  LN +   P  W +   A  + +    + + +   + +   L D     EL+ +++  
Sbjct: 34  LEKLNEEIASPDFWNDSQNALQVSKRASEVRSILDEYEHVASLLEDARTADELSADDE-- 91

Query: 83  SILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +  E  D L+R +   ++  +  S  SGE D  DA + ++ G GG E+QDW +ML +MY
Sbjct: 92  -MFAEERDELRRQLSDLLDGLEVSSWFSGEMDPCDAIVSINPGQGGLEAQDWVDMLYKMY 150

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           +++AEK+ +K   L+I  GE  G+  A + I+G NAYG L+ E GVHRLVRISP D   R
Sbjct: 151 SKYAEKKGWKVRLLDITPGEVIGLDRAVIQIEGKNAYGMLRSENGVHRLVRISPTDDKKR 210

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R T+F+ + V PVVDD IE++++ +D R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV
Sbjct: 211 RQTTFAGVEVLPVVDDEIEVDLNVNDVRVDVYRSSGPGGQCVNTTDSAVRLTHIPTGIVV 270

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ++SQ +NK  A+ +LRAKLYELE QKREE  +     + +  +G QIR+YVL PYQ
Sbjct: 271 TCQNQKSQLQNKDAAFKVLRAKLYELERQKREEEIDALRGERMDNSFGSQIRNYVLYPYQ 330

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +VKDLR+ IE  +   VL GD+++F+
Sbjct: 331 LVKDLRSGIETGNVDAVLSGDIEEFV 356


>gi|28493165|ref|NP_787326.1| peptide chain release factor 2 [Tropheryma whipplei str. Twist]
 gi|28572722|ref|NP_789502.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28410855|emb|CAD67240.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28476205|gb|AAO44295.1| peptide chain release factor RF-2 [Tropheryma whipplei str. Twist]
          Length = 376

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/333 (42%), Positives = 207/333 (62%), Gaps = 5/333 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R++ L  +  DP LW     A+ + RE       +  +  ++ +L +  +L+ L   E 
Sbjct: 31  KRIAELTARVSDPDLWTTPDRAQQIARELSITKAQLDRLTNLEAQLDEMRVLVTLLENEH 90

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  +L E S   + +  E  +   +++L+ E D   A L + AGAGG ++ D+A MLLRM
Sbjct: 91  DAGLLDEGSRKAKLLLEEANHLLIQNMLNNEYDCYPAVLTIRAGAGGIDAADFAQMLLRM 150

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWA+K   +   ++I   EEAGI+SATL I  P A+G L  E G HRLVRISP+++  
Sbjct: 151 YIRWAQKHSSEAIVMDISYAEEAGIRSATLRIDLPFAFGKLHQESGTHRLVRISPFNAAG 210

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+++ V P++++   IEI+  + RID +R+SG GGQ VNTTDSAVRITH+PTG+V
Sbjct: 211 KRHTSFAAVEVIPLLEEVSSIEITNDEIRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 270

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--GWGRQIRSYVLQ 318
           V CQ E+SQ +N+  A  +LRA+L    L KR+E A I +     I   WG Q+R+YVL 
Sbjct: 271 VSCQNEKSQIQNRESAMRILRARLL---LNKRQEEAAIRKELAGNIVASWGEQVRNYVLA 327

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PYQ+VKDLR+  E + P  V DGD+D F+ A +
Sbjct: 328 PYQLVKDLRSLHESSMPDKVFDGDIDGFIDAGI 360


>gi|266622716|ref|ZP_06115651.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865539|gb|EFC97837.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 275

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/264 (48%), Positives = 193/264 (73%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E+P  W++  ++  +++  ++L + ++  K+++ +  D  +++E+  EE+D S++ E  +
Sbjct: 2   EEPGFWEDPEKSTKIVQLAKNLKDTVNGYKDLEQQYEDIGVMIEMGNEENDPSVVPEVEE 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L+  K ++E  +  +LLSGE DS++A L ++AGAGGTES DW +ML RMY RWAEK+ +
Sbjct: 62  MLKEFKDKLEEIRINTLLSGEYDSDNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKGY 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E L+  DGEEAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++  +R TSF S  
Sbjct: 122 SVEVLDYLDGEEAGIKSVTIQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++++I+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ 
Sbjct: 182 VMPDIEEDLDVDINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQF 241

Query: 271 KNKAQAWNMLRAKLYELELQKREE 294
           +NK +A  ML+AKLY L+ Q+  E
Sbjct: 242 QNKDKAMQMLKAKLYMLKQQENAE 265


>gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
 gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
          Length = 370

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 204/325 (62%), Gaps = 13/325 (4%)

Query: 33  PHLWQNVIEAK----MLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQE 87
           P LW +  +A+    +L R +   D          D   D+L  L+E+  EE+D   L E
Sbjct: 42  PDLWDDQEKAQAVTSLLSRAKAEYDRVTGM-----DTKVDDLEALVEMGQEENDAETLLE 96

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
               L+ +K  V   +  +LLSGE D   A + + AGAGG ++ D+A ML+RMY RWAE+
Sbjct: 97  AEKELKIVKKAVGELEVRTLLSGEWDERSAVVTIRAGAGGVDAADFAEMLMRMYLRWAER 156

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             + T+ ++    EEAGIKSAT  +  P A+G L  E G HRLVRISP+D+  RR TSF 
Sbjct: 157 HGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLSVEGGTHRLVRISPFDNQGRRQTSFV 216

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P+++ +  IEI E+D +ID +R+SG GGQ VNTTDSAVR+THIPTG VV  Q E+
Sbjct: 217 AVEVIPLIEGTDSIEIPENDLKIDVFRSSGPGGQSVNTTDSAVRMTHIPTGTVVSMQNEK 276

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDL 326
           SQ +N+A A  +++++L  L L++ EE A   E +   +  WG Q+RSYVL PYQMVKDL
Sbjct: 277 SQIQNRAAALRVMQSRL--LLLKRAEEAAVKKEMAGDVKASWGDQMRSYVLNPYQMVKDL 334

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RT  E  +P+ V DGD+D F++A +
Sbjct: 335 RTEFETGNPTAVFDGDIDGFIEAGI 359


>gi|159898428|ref|YP_001544675.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891467|gb|ABX04547.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 337

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 207/331 (62%), Gaps = 10/331 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE--LALEEDDCS 83
           L  +  +P LW N  +A+ +++    +   +    ++ D L  +L  L   L L  DD  
Sbjct: 4   LEHQAAEPSLWDNPQQAQSILQRLARMQEEL----KMWDSLAVDLATLRDLLQLSADDAD 59

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            L +    +  +   V+  +   LL  + DS +A++ + +GAGG ESQDWA MLLRMY+R
Sbjct: 60  SLSQIEREVNGLTKSVDQLELSILLGEKYDSTNAFISIQSGAGGVESQDWAQMLLRMYSR 119

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E + F+T  +++ DGEEAGIKSATL ++GP AYG+ K E G+HRLVR+SP+D+N RRH
Sbjct: 120 WGESQGFRTTIVDMMDGEEAGIKSATLELRGPYAYGYAKAEAGIHRLVRLSPFDANHRRH 179

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVV 260
           TSF+ + V P VDD+ E++I+  D R+D YRA G GGQ VNTTDSAVR+ +    P  ++
Sbjct: 180 TSFARVEVLPEVDDAAEVKINPEDLRVDVYRAGGHGGQGVNTTDSAVRLVYRGGTPDEII 239

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ ERSQ +NK  A N+LRA+L E EL ++       +    +  WG QIRSYVL   
Sbjct: 240 VTCQNERSQLQNKETAMNVLRARLLERELARQVAERAKLKGEHRDAAWGNQIRSYVLDD- 298

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + VKD RTN+E ++   VLDG++D F+ A L
Sbjct: 299 RRVKDHRTNVETSNTQAVLDGEIDLFIDAFL 329


>gi|110639213|ref|YP_679422.1| peptide chain release factor 2 [Cytophaga hutchinsonii ATCC 33406]
 gi|110281894|gb|ABG60080.1| bacterial peptide chain release factor 2 (bRF-2) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 358

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 127/252 (50%), Positives = 184/252 (73%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F+ +LS E D   A LE++ GAGGTES DWA+ML+RMY  W EK  +    +    GE 
Sbjct: 107 EFKKMLSAEEDQLSAVLEINPGAGGTESNDWADMLMRMYIMWGEKNGYTVREIVNQPGEV 166

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK A+L I+G  AYG LK E GVHRLVR SP++++ +R TSF+S++VYP VD++I IE
Sbjct: 167 AGIKFASLGIEGQFAYGNLKSEIGVHRLVRDSPFNADGKRQTSFASVYVYPEVDETINIE 226

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+  D   DT+RA GAGGQ+VN  ++AVR+ H P+G++++CQQERSQ +NK +A  +L++
Sbjct: 227 INMGDVEWDTFRAGGAGGQNVNKVETAVRLKHKPSGLIIECQQERSQIQNKDKALKLLKS 286

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +LY++E+ KR E     E +K +I +G QIR+YVL PY+++KD+RT +E+T   +VL GD
Sbjct: 287 RLYQIEIDKRNEAKAAVEGTKKKIDFGSQIRNYVLFPYKLIKDVRTGVERTDVDNVLAGD 346

Query: 343 LDDFMKATLAIK 354
           L++++KA L +K
Sbjct: 347 LNEYIKAYLLMK 358


>gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
 gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
          Length = 375

 Score =  272 bits (696), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 151/338 (44%), Positives = 218/338 (64%), Gaps = 10/338 (2%)

Query: 23  LSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           L  LN   +D       P  W N   A+  +++   L +++    +   +L D   + EL
Sbjct: 36  LPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQWMGQLEDLKAIAEL 95

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              E+D ++ +E   NL ++  E++  + + LLSG  DS  A L ++AGAGGT++QDWA 
Sbjct: 96  LELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTINAGAGGTDAQDWAE 155

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMYTRW E++ +K    EI +G+EAGIKSATL I+G  AYG+LKGE+G HRLVRISP
Sbjct: 156 MLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVRISP 215

Query: 196 YDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           +++N +R TSF+ I V P +++  +++EI E D  I T R+ G GGQ+VN  ++AVR+ H
Sbjct: 216 FNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVRVVH 275

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           +PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R + IA I      E  WG QIR
Sbjct: 276 LPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEI-RGDMVEAAWGNQIR 334

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +YV  PYQMVKD+RTN E T  + V+DG LD F+++ L
Sbjct: 335 NYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYL 372


>gi|291550769|emb|CBL27031.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           torques L2-14]
          Length = 320

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 147/309 (47%), Positives = 215/309 (69%), Gaps = 1/309 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQF 104
           M+E + L +++  I ++     D L+L+E++  ED+     E  +       EV E  + 
Sbjct: 1   MKELKGLQDSVKEIDKLFTDYEDMLLLIEMSEGEDEEQEAAEEIEEELGTFEEVFEKLRI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            +LL G  D+++A + +HAGAGGTE+ DW  ML RMY+RWAEK+ ++ E L+  +G+ AG
Sbjct: 61  STLLIGPYDADNAIVTLHAGAGGTEAMDWTGMLYRMYSRWAEKKGYEVEMLDYLEGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK  T  +KG NAYG+L+ E+GVHRLVRISP+++N +R TSF+S  V P +++ I+IEI+
Sbjct: 121 IKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNANGKRQTSFASCDVIPDIEEDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML++KL
Sbjct: 181 DDDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           Y L+ Q++ E  +       +I +G QIRSYV+QPY +VKD RTN E ++   V+DG++D
Sbjct: 241 YVLKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTLVKDHRTNAEISNVGAVMDGNID 300

Query: 345 DFMKATLAI 353
            F+ A L++
Sbjct: 301 PFINAYLSM 309


>gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 517

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 142/340 (41%), Positives = 219/340 (64%), Gaps = 7/340 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLELAL 77
           ++ ++ L  K+ D  LW +  +A+ L+     L   +  + + + ++   D ++ L   L
Sbjct: 169 LEEIASLENKSGDSTLWDDPSKAQELLVALTELKEKVKLLNDFKSQVEEADTIVQLTEEL 228

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +  D  +L+E S  ++ +   ++  +   LLSG  D + A + + AGAGGT++QDWA+ML
Sbjct: 229 DSIDTGLLEEASKIIKALNKALDNFEMTRLLSGPYDKDGAVITISAGAGGTDAQDWADML 288

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMY RW EK+++K+  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP++
Sbjct: 289 LRMYVRWGEKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFN 348

Query: 198 SNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +   R TSF+ + V P++ ++S+++EI E D  I   RA G GGQ+VN  ++AVR+ HIP
Sbjct: 349 AKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIP 408

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRS 314
           TG+ V+C +ERSQ  NK +A   L+AKL  + E Q+  EI  I G++ K E  WG+QIR+
Sbjct: 409 TGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRN 466

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV  PY++VKD+RT  E +  S V+DG+LD F+KA L  K
Sbjct: 467 YVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 506


>gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
 gi|226739124|sp|B7K0A6|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
          Length = 365

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 151/338 (44%), Positives = 218/338 (64%), Gaps = 10/338 (2%)

Query: 23  LSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           L  LN   +D       P  W N   A+  +++   L +++    +   +L D   + EL
Sbjct: 26  LPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQWMGQLEDLKAIAEL 85

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              E+D ++ +E   NL ++  E++  + + LLSG  DS  A L ++AGAGGT++QDWA 
Sbjct: 86  LELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTINAGAGGTDAQDWAE 145

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMYTRW E++ +K    EI +G+EAGIKSATL I+G  AYG+LKGE+G HRLVRISP
Sbjct: 146 MLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVRISP 205

Query: 196 YDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           +++N +R TSF+ I V P +++  +++EI E D  I T R+ G GGQ+VN  ++AVR+ H
Sbjct: 206 FNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVRVVH 265

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           +PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R + IA I      E  WG QIR
Sbjct: 266 LPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEI-RGDMVEAAWGNQIR 324

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +YV  PYQMVKD+RTN E T  + V+DG LD F+++ L
Sbjct: 325 NYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYL 362


>gi|291295687|ref|YP_003507085.1| LigA [Meiothermus ruber DSM 1279]
 gi|290470646|gb|ADD28065.1| LigA [Meiothermus ruber DSM 1279]
          Length = 365

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 154/352 (43%), Positives = 214/352 (60%), Gaps = 11/352 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L G  D      RL  L+ +  DP LW +   A+ + +E   L  A+   + +
Sbjct: 6   LEHRLEALRGYLDIAGKEARLKELDRQINDPSLWNDPAHARKISQEAARLRKAVEGYRRL 65

Query: 63  QDRLCDNLIL-LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  L   L L  EL+ EE +     +    L+R   E+E    ++LL      N A + +
Sbjct: 66  ESDLQGLLELWPELSPEERE-----QMQPELERAGRELEELYHQTLLGFPYAENAAIVTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA ML RMYTR+AE++ F  E +++  G EAGI  A  +++G NAYG L
Sbjct: 121 KPGAGGTEACDWAQMLYRMYTRFAERKGFSLELVDLEPGAEAGIDQAQFIVRGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+++  +R TSF+++ V P VD+S++I+I+  D RID  R+ G GGQ
Sbjct: 181 SAEAGVHRLVRPSPFNAQGKRQTSFAAVEVMPEVDESVDIQIAPEDLRIDVMRSQGKGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-G 299
            VNTTDSAVR+ H+PTG+ V+CQ  RSQ KNK  A N+LR+KL+E+E +K+ EE+A + G
Sbjct: 241 GVNTTDSAVRVVHLPTGIFVKCQVTRSQQKNKEMALNILRSKLFEIEWKKKQEELARLKG 300

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ES   E  WG QIRSYVL   Q +KD RT   +  P +VLDGDL+  + A L
Sbjct: 301 ESRPIE--WGSQIRSYVLD-KQYIKDHRTGEMRHDPENVLDGDLESLIWAGL 349


>gi|86159138|ref|YP_465923.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775649|gb|ABC82486.1| bacterial peptide chain release factor 2 (bRF-2) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 309

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 144/270 (53%), Positives = 193/270 (71%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +EV
Sbjct: 8   VRRSLDDAQALNELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEV 67

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGWL
Sbjct: 68  KSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWL 127

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D N+RR TSF+++ V P +DD I I+I E+D RIDTYR+SGAGGQ
Sbjct: 128 KAERGVHRLVRISPFDQNARRQTSFAAVDVTPEIDDDIVIDIKEADVRIDTYRSSGAGGQ 187

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VN TDSAVR+TH+PTG+VV  Q ERSQ KN+  AW +LRAKLY+LE +KR    +  E+
Sbjct: 188 KVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRNVAWKILRAKLYDLEEKKRAAARDAAEA 247

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
            K +I +G QIRSYVLQPYQMVKDLRT +E
Sbjct: 248 LKKDIDFGSQIRSYVLQPYQMVKDLRTGVE 277


>gi|229815728|ref|ZP_04446053.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
 gi|229808644|gb|EEP44421.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
          Length = 377

 Score =  271 bits (694), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 148/335 (44%), Positives = 202/335 (60%), Gaps = 4/335 (1%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILL 73
           D A  R+  L   +  P  W +   A+  M E   +   ++ +   ++RL D    L L 
Sbjct: 31  DEARGRVGELEQASAAPGFWDDADAARAHMAELAQVKGDVALVDGARERLSDARAALELA 90

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E   EE     + E ++    +   ++  +  S  +GE D   A L +  G GG E+QDW
Sbjct: 91  EEMGEEGGAEFVAEATEAAAELTHSIDEMELSSWFTGEFDHGSAILSIKPGQGGLEAQDW 150

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             ML +MY ++  +R +K    +    E  GI  AT+ ++G +A+G L+ E GVHRLVRI
Sbjct: 151 TFMLFKMYMKYCARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGMLRAEAGVHRLVRI 210

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP D+  RR T+F+ + V PV+ D I+IE++  D R+D Y ASG GGQ VNTTDSAVR+T
Sbjct: 211 SPTDAKKRRQTTFAGVEVIPVLPDDIQIEVAPDDIRVDVYHASGPGGQGVNTTDSAVRVT 270

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV CQ ERSQ +NKA    +L+A+LYELELQKRE+  +     KTEIG+G QIR
Sbjct: 271 HIPTGIVVTCQNERSQIQNKAACMQILKARLYELELQKREDTLDEIRGPKTEIGFGNQIR 330

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
           SYVL PYQMVKDLR  +E ++   VL DGDLD F+
Sbjct: 331 SYVLYPYQMVKDLRCGVETSNVDGVLEDGDLDPFI 365


>gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101]
 gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium
           erythraeum IMS101]
          Length = 288

 Score =  271 bits (694), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 136/273 (49%), Positives = 192/273 (70%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S+L E +  +  +  E++  + + LLSG  D N A + ++AGAGGT++QDWA MLL
Sbjct: 4   ETDESLLAEANLTIANLNQELDQWELQQLLSGLYDQNGAVVTINAGAGGTDAQDWAEMLL 63

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW E+ K+K +  EI +G+EAG+KSATL I G  AYG+LK E+G HRLVRISP+++
Sbjct: 64  RMYTRWGEEHKYKVQLAEISEGDEAGLKSATLEIIGRYAYGYLKAEKGTHRLVRISPFNA 123

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P++D S+E++I E D  I T R+ G GGQ+VN  ++AVR+ HIPTG
Sbjct: 124 NGKRQTSFAGVEVMPILDHSVELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTG 183

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + V+C QERSQ +NK +A  +L+A+L  +  ++R +  N       E  WG QIR+YV  
Sbjct: 184 LSVRCTQERSQLQNKDKALALLKARLLIIAQEQRAQEINEIRGDMVEAAWGNQIRNYVFH 243

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PYQMVKDLRT  E T+ +DV++G+LD F++A L
Sbjct: 244 PYQMVKDLRTQKETTAINDVMNGELDQFIEAYL 276


>gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
 gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084775|gb|EDN83820.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
          Length = 376

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 141/338 (41%), Positives = 205/338 (60%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D        L  K  +P LW +   A+ +  +   + + +  +     R+ D   L+
Sbjct: 24  LDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQSQLKRLASADQRIEDVETLV 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE+D   L E    ++ I+ +++  + ++LL GE D   A + + +GAGG ++ D+
Sbjct: 84  ELGQEEEDADTLAEAKAEVESIQKDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L  E G HRLVRI
Sbjct: 144 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRI 203

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ VNTT SAVRIT
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 263

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+R
Sbjct: 264 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PYQMVKDLRT  E +    V DGD+D+F++A +
Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGI 360


>gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1]
 gi|171276664|gb|EDT44325.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium dentium Bd1]
          Length = 380

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 207/338 (61%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D    +   L  +  +P LW +   A+ +  +   + + +  +     R+ D   L+
Sbjct: 28  LDVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQSQLKRLSSASQRIDDVETLV 87

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE+D   L+E  + ++ I+ +++  + ++LL GE D   A + + +GAGG ++ D+
Sbjct: 88  ELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 147

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +  E G HRLVRI
Sbjct: 148 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 207

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ VNTT SAVRIT
Sbjct: 208 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 267

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+R
Sbjct: 268 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 327 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 364


>gi|197302438|ref|ZP_03167493.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
 gi|197298336|gb|EDY32881.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
          Length = 339

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/329 (45%), Positives = 225/329 (68%), Gaps = 1/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  + E+P  W N   ++ +M+E + L +++  I+++     D L+L++++  ED+    
Sbjct: 1   MEKRLEEPGFWDNPEVSQQVMKELKGLQDSVKEIEKLYTDYEDMLLLIDMSAGEDEEEET 60

Query: 86  QETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E     LQ+ +   E  +  +LL G  D ++A + +HAGAGGTE+ DW  ML RMY+RW
Sbjct: 61  AEEVAEELQQFEAVFEQLRISTLLIGPYDRDNAIVTLHAGAGGTEAMDWTGMLYRMYSRW 120

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEK+ ++ E L+  +G+ AGIK  T  +KG NAYG+L+ E+GVHRLVRISP+++  +R T
Sbjct: 121 AEKKGYELEVLDYLEGDVAGIKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNAAGKRQT 180

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S  V P +++ I+IEI+E + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ
Sbjct: 181 SFASCDVIPDIEEDIDIEINEDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 240

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH NK +A  ML++KL  L+ Q++ E  +      ++I +G QIRSYV+QPY MVK
Sbjct: 241 NERSQHMNKDKAMQMLKSKLLLLKQQEQAEKMSDIRGEVSDINFGNQIRSYVMQPYTMVK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           D RTN E ++   V+DG++D F+ A L++
Sbjct: 301 DHRTNAEISNVGAVMDGNIDPFINAYLSM 329


>gi|24638472|sp|P96314|RF2_BACFI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 294

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/282 (48%), Positives = 191/282 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L    G  D +   +R++ L+     P  W +   A+ ++ E   L   ++   E+
Sbjct: 13  MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++  +  +  EL  EE D  + +E    ++ +   +   + + LLS   D N+A LE+H
Sbjct: 73  EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW+E+R FK E ++   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EI+I   D ++DTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +NTTDSA+RITH+PT  VV CQ ERSQ KN+ QA  ML+AKL
Sbjct: 253 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 294


>gi|203287543|ref|YP_002222558.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
 gi|201084763|gb|ACH94337.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
          Length = 347

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/350 (43%), Positives = 219/350 (62%), Gaps = 8/350 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG FD D    +L     +  + + W +   A+ +++ +  L   I   K +  +L
Sbjct: 1   MKMYGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWKNLICQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAG 124
            D   L ++A  EDD +IL+   +     KL  +YK   +L     + D N A+L +H+G
Sbjct: 61  KDLRELCKIAESEDDKAILERDVN-----KLREQYKHILTLSYFKEDIDINSAFLTIHSG 115

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+ DW NML R Y R++E+R +K E +++ + E  GIKS T+ IKG  AYG+LK E
Sbjct: 116 AGGTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSE 174

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN
Sbjct: 175 VGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKSEDIRVDTYRASGAGGQHVN 234

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K 
Sbjct: 235 KTSSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKK 294

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 295 DISWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344


>gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
 gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
          Length = 308

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/290 (48%), Positives = 197/290 (67%), Gaps = 2/290 (0%)

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   ++EL   E D S+L E   NL R+  +++  + + LLS   D N A L ++
Sbjct: 8   QKTIEDTDAIVELLELESDESLLAEAESNLTRLNHDLDRWELQQLLSAPYDKNGAVLTIN 67

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDWA MLLRMYTRW E   +K    E+ +G+EAGIKS TL I+G  AYG+LK
Sbjct: 68  AGAGGTDAQDWAEMLLRMYTRWGEAHGYKVYLAELSEGDEAGIKSVTLEIEGRYAYGYLK 127

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G HRLVRISP+++N +R TSF+ + + P++D  + +EI E D  + T RA G GGQ+
Sbjct: 128 CEKGTHRLVRISPFNANGKRQTSFAGVEIMPMIDQGVHLEIPEKDLEVTTSRAGGKGGQN 187

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +EIA I   
Sbjct: 188 VNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEI-RG 246

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              E  WG QIR+YV  PYQMVKDLRT+ E T+  DV++G+LD F++A L
Sbjct: 247 DLVEAAWGNQIRNYVFHPYQMVKDLRTSEETTAIDDVMNGELDRFIQAYL 296


>gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
 gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
          Length = 370

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/351 (41%), Positives = 219/351 (62%), Gaps = 17/351 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL------ 66
           + D +   +++  L  ++  P LW +   A       Q + +A+S      DR+      
Sbjct: 22  VLDLEKLKKQIVDLEEQSAAPDLWDDPDAA-------QKITSALSRANAENDRVENMDAA 74

Query: 67  CDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
            D+L +L+E+  EE+D   L E    L++++  V   +  +LL+GE D  +A + + AGA
Sbjct: 75  IDDLEVLVEMGTEENDADTLAEAERELKKLQKAVGELEVRTLLNGEFDEREAVVTIRAGA 134

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KS T  +  P A+G L  E 
Sbjct: 135 GGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSVTFEVNVPYAFGNLSVEA 194

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI E++ +ID +R+SG GGQ VNT
Sbjct: 195 GTHRLVRISPFDNQGRRQTSFAAVEVVPLIETTDTIEIPENELKIDVFRSSGPGGQSVNT 254

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKT 304
           TDSAVR+THIPTG VV  Q E+SQ +N+A A  +++++L  L L+K+EE A   E +   
Sbjct: 255 TDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRL--LLLKKQEEDAQKKELAGDI 312

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +  WG Q+RSYVL PYQMVKDLRT  E  + S V DGD+D F++A +  K+
Sbjct: 313 KASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFIEAGIRWKR 363


>gi|1865700|emb|CAA67778.1| peptide release factor 2 [Bacillus firmus]
          Length = 282

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/282 (48%), Positives = 191/282 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L    G  D +   +R++ L+     P  W +   A+ ++ E   L   ++   E+
Sbjct: 1   MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++  +  +  EL  EE D  + +E    ++ +   +   + + LLS   D N+A LE+H
Sbjct: 61  EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW+E+R FK E ++   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 121 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EI+I   D ++DTYRASGAGGQH
Sbjct: 181 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +NTTDSA+RITH+PT  VV CQ ERSQ KN+ QA  ML+AKL
Sbjct: 241 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 282


>gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group]
          Length = 457

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/343 (40%), Positives = 221/343 (64%), Gaps = 7/343 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLE 74
           D   + ++ L  K+ D  LW +  +A+ ++     + + +  + +++ ++   + ++ L 
Sbjct: 106 DQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKSQVEEAETIVKLT 165

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             L+  D  +L+E S  ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA
Sbjct: 166 EELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDWA 225

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR S
Sbjct: 226 DMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQS 285

Query: 195 PYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           P+++   R TSF+ + V P++ ++S+++EI E D  I   RA G GGQ+VN  ++AVR+ 
Sbjct: 286 PFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMV 345

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQ 311
           HIPTG+ V+C +ERSQ  NK +A + L+AKL  + E Q+  EI  I G++ K E  WG+Q
Sbjct: 346 HIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQ 403

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 404 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 446


>gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
 gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
          Length = 380

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 207/338 (61%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D    +   L  +  +P LW +   A+ +  +   + + +  +     R+ D   L+
Sbjct: 28  LDVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQSQLKRLASASQRIDDVETLV 87

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE+D   L+E  + ++ I+ +++  + ++LL GE D   A + + +GAGG ++ D+
Sbjct: 88  ELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 147

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +  E G HRLVRI
Sbjct: 148 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 207

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ VNTT SAVRIT
Sbjct: 208 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 267

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+R
Sbjct: 268 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 326

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 327 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 364


>gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
 gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
          Length = 373

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/338 (41%), Positives = 206/338 (60%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D    +++ L  +  +P LW +   A+ +        + +  +     R+ D   L+
Sbjct: 24  LDMDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSASQRIDDVETLV 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE+D   L E  + +++I+ +++  + ++LL GE D   A + + +GAGG ++ D+
Sbjct: 84  ELGQEEEDADTLAEAQEEVKKIQSDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L  E G HRLVRI
Sbjct: 144 AQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRI 203

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR TSF+++ V P+V+ +  I+I +SD R+DTY +SG GGQ VNTT SAVRIT
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDSDIRVDTYCSSGPGGQGVNTTYSAVRIT 263

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+R
Sbjct: 264 HLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PYQMVKDLRT  E +    V DGDLD F++A +
Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGI 360


>gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 376

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 204/338 (60%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D    +   L  +  +P LW N   A+ +  +   + + +  +     R+ D   L+
Sbjct: 24  LDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQSQLKRLASASQRIDDVETLV 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EE+D   L E    ++ I+ ++   + ++LL GE D   A + + +GAGG ++ D+
Sbjct: 84  ELGQEEEDADTLAEAQSEVESIQNDLADMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +  E G HRLVRI
Sbjct: 144 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 203

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ VNTT SAVRIT
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 263

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+R
Sbjct: 264 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 360


>gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
          Length = 376

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 204/338 (60%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D    +   L  +  +P LW +   A+ +  +   + + +  +     R+ D   L+
Sbjct: 24  LDVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQSQLKRLSSASQRIDDVETLV 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EEDD   L E    ++ I+ ++   + ++LL GE D   A + + +GAGG ++ D+
Sbjct: 84  ELGQEEDDADTLAEARSEVESIQNDLADMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +  E G HRLVRI
Sbjct: 144 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 203

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ VNTT SAVRIT
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 263

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+R
Sbjct: 264 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 360


>gi|295105719|emb|CBL03262.1| peptide chain release factor 2 [Gordonibacter pamelaeae 7-10-1-b]
          Length = 363

 Score =  269 bits (688), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 150/337 (44%), Positives = 211/337 (62%), Gaps = 4/337 (1%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G    D+    L+ L+ +   P  W +   A+ + ++  +L   I    E    L D   
Sbjct: 20  GFLHIDDKTAELAKLDEEIAAPGFWDDAAHAQGVSKQASNLRETIREYDEAAALLEDARA 79

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LELA E+   +   E  D L R+   ++  +  S  S   D  DA L V+ G+GG E+Q
Sbjct: 80  ALELAGED--EAFAAEADDALARLSDLLDALEITSWFSERFDGGDAILTVNPGSGGLEAQ 137

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW +ML RMY R+AEK+ +K   L++  GE  G+  AT+ I+G NA+G LK E GVHRLV
Sbjct: 138 DWTDMLYRMYVRYAEKKDWKVTILDVVPGEGIGLDKATIQIEGRNAFGMLKSENGVHRLV 197

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP D   RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ VNTTDSAVR
Sbjct: 198 RISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQCVNTTDSAVR 257

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPT +VV CQ E+SQ +NK  A+ +L+AKLYE E QKR +E+A +    + +  +G 
Sbjct: 258 LTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRAQELAEL-RGDRMDNTFGS 316

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           QIR+YVL PYQMVKD+R+ +E  +   VLDGDL++F+
Sbjct: 317 QIRNYVLYPYQMVKDVRSGVETGNVDAVLDGDLEEFV 353


>gi|158317542|ref|YP_001510050.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
 gi|158112947|gb|ABW15144.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
          Length = 386

 Score =  269 bits (688), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 147/337 (43%), Positives = 207/337 (61%), Gaps = 4/337 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R   L  +  DP LW +   A+ + R    +   I  ++ +
Sbjct: 32  LDATLAGIATVLDVEGLRRRAQALEQEAADPDLWSDQDRAQAVTRRLSAVKGDIGRVEGL 91

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D+LI    AL+  D  +L E + +L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 92  RRRL-DDLIA---ALDLGDDDLLTEAAADLPALARDISTLEVRTLLSGEYDERDAIVQLS 147

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L+
Sbjct: 148 AGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKCPYAYGTLR 207

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + V P V+ S  ++I E + RID +R+SG GGQ 
Sbjct: 208 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQG 267

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 268 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGG 327

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             ++ +G QIR+YVL PYQMVKDLRT +E ++ + VL
Sbjct: 328 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTNAVL 364


>gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9313]
 gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT
           9313]
          Length = 375

 Score =  269 bits (688), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 150/334 (44%), Positives = 210/334 (62%), Gaps = 9/334 (2%)

Query: 26  LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           LN + +D       P  W +   A+  MR+   +   ++ I   +  + D    LEL   
Sbjct: 30  LNARQQDLEQLAAQPDFWNDQQNAQKQMRQLDEVKAQLTQITLWRSAVNDAQATLELYDL 89

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +L E    L++++  ++  + E LLSGE D   A L ++AGAGGT++QDWA MLL
Sbjct: 90  EPDDEMLSEAQSGLKQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 149

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE         E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRLVRISP+++
Sbjct: 150 RMYTRWAEDHDMTVTVDELSEGEEAGIKSATVEIEGRYAYGYLRNEKGTHRLVRISPFNA 209

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + + P +D  +E++I E D  + T R+ GAGGQ+VN  ++AVRI HIPTG
Sbjct: 210 NGKRQTSFAGVEIMPKIDQEVELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTG 269

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           + V+C QERSQ +NK +A  +L+AKL  +  ++R  EIA+I      E  WG QIR+YV 
Sbjct: 270 LAVRCTQERSQLQNKEKALALLKAKLMVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 328

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQMVKDLRT  E T    V++GDLD F++  L
Sbjct: 329 HPYQMVKDLRTAEETTDVQAVMNGDLDRFIQTLL 362


>gi|291299376|ref|YP_003510654.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568596|gb|ADD41561.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
          Length = 376

 Score =  269 bits (688), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/354 (42%), Positives = 220/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D      S L      P LW +   A+ +     ++ + ++ I+++
Sbjct: 13  LNSTLESVTAVLDLDALSVEKSELEAAAASPDLWDDTTHAQKVTSRLSYVQSELNRIEDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L +LA  E+D + ++E S  L  +   +E  +  +LLSGE DS +A + + 
Sbjct: 73  RRRLDDAEVLWDLAQSEEDPAAVEEASKELAALSKAIEELEVRTLLSGEYDSREALISIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG +S D+A  L+RMY RWAE+  + TE  ++   EEAGIKSAT  +K P AYG L 
Sbjct: 133 SGAGGADSADFAEQLMRMYLRWAERHGYPTEVYDVSYAEEAGIKSATFAVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HR+VRIS YD+  RR T+F+++ V PVV+ + +I+I + + R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRVVRISKYDNQGRRQTAFAAVEVVPVVEQTDDIDIPDDEIRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301
           VNTTDSAVRITH+ TG+VV CQ ERSQ +N+A A  +L+AKL  L  ++ EE A I E  
Sbjct: 253 VNTTDSAVRITHLETGIVVSCQNERSQLQNRATAMAVLKAKL--LARRREEENAKIDELR 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYV  PYQMVKDLRT  E  +   V DG++D  ++A +  +K
Sbjct: 311 GSVQASWGEQMRSYVQHPYQMVKDLRTGWETANVMAVYDGEIDGLIEAGIRWRK 364


>gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group]
          Length = 498

 Score =  269 bits (687), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 139/343 (40%), Positives = 221/343 (64%), Gaps = 7/343 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLE 74
           D   + ++ L  K+ D  LW +  +A+ ++     + + +  + +++ ++   + ++ L 
Sbjct: 147 DQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKLQVEEAETIVKLT 206

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             L+  D  +L+E S  ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA
Sbjct: 207 EELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDWA 266

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR S
Sbjct: 267 DMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQS 326

Query: 195 PYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           P+++   R TSF+ + V P++ ++S+++EI E D  I   RA G GGQ+VN  ++AVR+ 
Sbjct: 327 PFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMV 386

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQ 311
           HIPTG+ V+C +ERSQ  NK +A + L+AKL  + E Q+  EI  I G++ K E  WG+Q
Sbjct: 387 HIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQ 444

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 445 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 487


>gi|269218746|ref|ZP_06162600.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211857|gb|EEZ78197.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 378

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 143/341 (41%), Positives = 211/341 (61%), Gaps = 15/341 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE- 79
           +R++ L   +  P LW +  +A+ +  +  H    +  I  +   L D   L E+A EE 
Sbjct: 30  ERIAELTEASAAPDLWDDQDKAQSVTSKLSHAQAELDKINAMSAALDDLETLKEMADEEA 89

Query: 80  -DDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D     E   +L+R    +  ++   +  +LLSG+ D  +A + + +GAGG ++ D+A
Sbjct: 90  GSDPETAAELYSDLERELGQVGADMSELEIRTLLSGKYDEREAVVTIRSGAGGVDAADFA 149

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            +L RMY RWAE+R +  + L+    EEAGIKS T  +  P AYG L  E G HRLVRIS
Sbjct: 150 QILQRMYLRWAERRGYSAKVLDTSYAEEAGIKSTTFEVSAPYAYGTLSVEAGTHRLVRIS 209

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+  RR TSF+++ V P+++ +  I++ E+D R+D +R+SG GGQ VNTTDSAVRITH
Sbjct: 210 PFDNQGRRQTSFAAVEVIPLIEQTDHIDVPEADIRVDVFRSSGPGGQSVNTTDSAVRITH 269

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLY----ELELQKREEIANIGESSKTEIGWGR 310
           IPTG+VV  Q E+SQ +N+A A  +L+++L     E E ++++E+A   ++S     WG 
Sbjct: 270 IPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQEEEAREKKELAGDIKAS-----WGD 324

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +
Sbjct: 325 QMRSYVLQPYQMVKDLRTGYEAGNPEAVFDGDIDGFIDAGI 365


>gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group]
 gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica
           Group]
 gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group]
          Length = 460

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 139/343 (40%), Positives = 221/343 (64%), Gaps = 7/343 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLE 74
           D   + ++ L  K+ D  LW +  +A+ ++     + + +  + +++ ++   + ++ L 
Sbjct: 109 DQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKLQVEEAETIVKLT 168

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             L+  D  +L+E S  ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA
Sbjct: 169 EELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDWA 228

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR S
Sbjct: 229 DMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQS 288

Query: 195 PYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           P+++   R TSF+ + V P++ ++S+++EI E D  I   RA G GGQ+VN  ++AVR+ 
Sbjct: 289 PFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMV 348

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQ 311
           HIPTG+ V+C +ERSQ  NK +A + L+AKL  + E Q+  EI  I G++ K E  WG+Q
Sbjct: 349 HIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQ 406

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 407 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 449


>gi|283778052|ref|YP_003368807.1| peptide chain release factor 2 [Pirellula staleyi DSM 6068]
 gi|283436505|gb|ADB14947.1| bacterial peptide chain release factor 2 (bRF- 2) [Pirellula
           staleyi DSM 6068]
          Length = 398

 Score =  268 bits (685), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 145/350 (41%), Positives = 220/350 (62%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ ++++ L G  D+D   ++  FL  +   P  W    +A  ++ + + L   ++ +  
Sbjct: 33  KIQQRVDQLRGSLDYDGKKKQFEFLEARMSQPDFWNVQEKALEVVSQVKSLKAILAPLDA 92

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I +   D   +L++A   DD S   +    ++RI+ +++  + ++LL+G  D+  A + +
Sbjct: 93  IVNSASDLPGMLDMA--GDDESFAADLRAEIERIEKQLDDLELKALLNGPLDNVGAIVTI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HA  GGT++ DWA MLLRMY  WA+K  ++ +  E  + + AGI +ATL+I+GP AYG+L
Sbjct: 151 HARDGGTDASDWAEMLLRMYIGWAQKNGYEYKVTERDEADVAGISAATLVIRGPMAYGYL 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVRISP++S  +R TSF+++ V P + D  E+ I++ D R DTYRA GAGGQ
Sbjct: 211 KGESGHHRLVRISPFNSEGKRQTSFAAVDVLPEIADDFEVVINKEDIREDTYRAGGAGGQ 270

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+TH P+G+VVQCQ ERSQH N+A A+ MLRA+L   E ++RE  +     
Sbjct: 271 HVNKTESAVRLTHFPSGIVVQCQNERSQHSNRATAYKMLRARLARAEEERREAESASKYK 330

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           S  ++G+G QIR+Y L P Q VKD RT   +     VLDG+L  F+ + L
Sbjct: 331 SAAKVGFGSQIRNYFLHPTQRVKDSRTGYSEGDFHSVLDGNLQGFIDSVL 380


>gi|295111639|emb|CBL28389.1| peptide chain release factor 2 [Synergistetes bacterium SGP1]
          Length = 224

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 128/220 (58%), Positives = 165/220 (75%), Gaps = 2/220 (0%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMY R+AE+   K   LE  + EEAGIKSAT++++G NAYG+LK E+GVHRLVRISP
Sbjct: 1   MLLRMYLRYAERDGLKATVLEATNDEEAGIKSATVMMEGDNAYGFLKAERGVHRLVRISP 60

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +DS  RRHTSF+S+ V P   D ++++I   D ++DTYRASGAGGQ+VN TDSA+RITH+
Sbjct: 61  FDSAHRRHTSFASVLVTPEFSDDVDVDIRPEDLKVDTYRASGAGGQYVNRTDSAIRITHL 120

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRS 314
           PTG+VV CQ ERSQH N+  A ++LR+KLYE  LQ+R+ E+A++    K E  WG QIRS
Sbjct: 121 PTGIVVTCQNERSQHMNRQVAMHVLRSKLYERALQERQDELASV-VGDKKETTWGSQIRS 179

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YVL PY +VKD RT +EK +   VLDGD+DDF+   L  +
Sbjct: 180 YVLHPYTLVKDHRTGLEKGNAQAVLDGDIDDFIMEYLRFR 219


>gi|116515195|ref|YP_802824.1| hypothetical protein BCc_269 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257049|gb|ABJ90731.1| peptide chain release factor RF-2 [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 365

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 130/275 (47%), Positives = 192/275 (69%), Gaps = 1/275 (0%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D +IL+E +   + IK ++   +   + + + D N+ YL++ +G+GG ESQDW  MLL
Sbjct: 90  ENDINILKEINIQYKAIKNKIYVLESYMMFNHKNDKNNCYLDIQSGSGGLESQDWTKMLL 149

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           +MY ++  K+KF T+ +    G+  GIKS TL IKG  A+GWL+ E G+HRLVR SP+D+
Sbjct: 150 KMYLKYLYKKKFVTKIISETVGDNGGIKSITLSIKGKFAFGWLRTETGIHRLVRKSPFDA 209

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             +RHT+FSSI+VYP + ++I+I +   + RID YR+SGAGGQHVN T+SAVRITH+PTG
Sbjct: 210 GKKRHTTFSSIFVYPALTNNIDINLQSKNLRIDVYRSSGAGGQHVNRTESAVRITHLPTG 269

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V QCQ  RSQHKNK  A   L+AKLYE+E++K++         K+ I  G QIRSY+L 
Sbjct: 270 IVTQCQNSRSQHKNKNTAIKQLKAKLYEIEIKKKKIEKKKINKKKSNIRSGNQIRSYILD 329

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + +KD+RT +E+   ++VL+GD+ +F+K +L +
Sbjct: 330 DSR-IKDMRTKLERKDINNVLNGDIHEFIKKSLKM 363


>gi|261338116|ref|ZP_05966000.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
 gi|270276738|gb|EFA22592.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
          Length = 376

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 199/326 (61%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  +P LW +   A+ +  +   + + +  +     R+ D   L+EL  EE D   L
Sbjct: 36  LEQEAAEPGLWDDPEHAQKVTSKLSAVQSQLKHLASAASRIDDVETLVELGREEADQDTL 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    ++ I  ++   + ++L+ GE D   A + + +GAGG ++ D+A MLLRMY RWA
Sbjct: 96  DEAQSEVESITNDLRDMEIQTLMDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWA 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  +K + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+V+ +  IE+ ES+ R+DTY ASG GGQ VNTT SAVRITHIPTG+VV  Q 
Sbjct: 216 FAAVEVVPLVEATDHIEVPESEIRVDTYCASGPGGQGVNTTYSAVRITHIPTGIVVTMQD 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 ERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E +    V DGD+D F++A +
Sbjct: 335 LRTGEETSQTQAVFDGDIDAFIQAGI 360


>gi|187917953|ref|YP_001883516.1| peptide chain release factor 2 [Borrelia hermsii DAH]
 gi|119860801|gb|AAX16596.1| bacterial peptide chain release factor 2 [Borrelia hermsii DAH]
          Length = 353

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/356 (42%), Positives = 226/356 (63%), Gaps = 8/356 (2%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M   ++    GG FD D    +L     +  + + W +  +A+ +++ +  L   I   +
Sbjct: 1   MNFWKKFKMSGGSFDKDKLKTQLKEYEKQINNENFWNDNKKAQEILKNQNILKAKIEPWE 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAY 118
           ++  +L D   L E+A  E+D  +L +  +     KL+ +YK   ++     + D ++A+
Sbjct: 61  DLIFKLQDLRELCEIAESEEDTILLDKDIN-----KLKEQYKHLLTISYFKEDIDISNAF 115

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L +H+GAGGTE+ DW +ML R+Y R++E+R +KTE +++ + E  GIKS T+ IKG  AY
Sbjct: 116 LTIHSGAGGTEACDWVSMLYRIYLRYSERRGYKTELIDLLEAE-GGIKSVTIEIKGKYAY 174

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E G+HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGA
Sbjct: 175 GFLKSEIGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGA 234

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +  
Sbjct: 235 GGQHVNKTSSAVRITHLQTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKALEQQKSKS 294

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  K +I WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 295 KQEEKKDISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350


>gi|203284000|ref|YP_002221740.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
 gi|201083443|gb|ACH93034.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
          Length = 347

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/346 (43%), Positives = 218/346 (63%), Gaps = 8/346 (2%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD D    +L     +  + + W +   A+ +++ +  L   I   + +  +L D  
Sbjct: 5   GGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWENLICQLKDLR 64

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128
            L ++A  EDD ++L+   +     KL  +YK   +L     + D N A+L +H+GAGGT
Sbjct: 65  ELCKIAESEDDKALLERDVN-----KLREQYKHILTLSYFKEDIDINSAFLTIHSGAGGT 119

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+ DW NML R Y R++E+R +K E +++ + E  GIKS T+ IKG  AYG+LK E G+H
Sbjct: 120 EACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVGIH 178

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN T S
Sbjct: 179 RLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVNKTSS 238

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K +I W
Sbjct: 239 AVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDISW 298

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 299 GNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344


>gi|224282580|ref|ZP_03645902.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum
           PRL2010]
 gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium bifidum PRL2010]
 gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 375

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/338 (42%), Positives = 202/338 (59%), Gaps = 1/338 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D +    +++ L T+   P LW +   A+ +          +  + E   R+ D   L+
Sbjct: 24  LDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQAQLKRLNEANRRIEDVETLV 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA EE D   L E    +  I  E++  + ++LL GE D   A + + +GAGG ++ D+
Sbjct: 84  ELAQEEADADSLSEAQSEIGSIAQELDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L  E G HRLVRI
Sbjct: 144 AQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRI 203

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ VNTT SAVRIT
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRIT 263

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+R
Sbjct: 264 HLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL PYQMVKDLRT  E +    V DGD+D F++A +
Sbjct: 323 SYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGI 360


>gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays]
 gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays]
 gi|223950205|gb|ACN29186.1| unknown [Zea mays]
          Length = 449

 Score =  266 bits (680), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 217/337 (64%), Gaps = 7/337 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLELALEED 80
           ++ L  K+ D  LW +  +A+ ++     + + +  + + + ++   + ++ L   L+  
Sbjct: 108 IASLENKSSDSSLWDDPSKAQGILVSLTEVKDKVKLLNDFKLQIEEAETIVKLTEELDSI 167

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  +L+E S  ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLLRM
Sbjct: 168 DTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRM 227

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP+++  
Sbjct: 228 YVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKG 287

Query: 201 RRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R TSF+ + V P++ ++S+ ++I E D  I   RA G GGQ+VN  ++AVR+ HIPTG+
Sbjct: 288 LRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGI 347

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVL 317
            V+C +ERSQ  NK +A + L+AKL  + L++R  EI  I G+  K E  WG+QIR+YV 
Sbjct: 348 AVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAE--WGQQIRNYVF 405

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 406 HPYKLVKDVRTGCETSDITGVMDGELDPFIRAYLKYK 442


>gi|257791746|ref|YP_003182352.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|317487783|ref|ZP_07946376.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325831767|ref|ZP_08164956.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
 gi|257475643|gb|ACV55963.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|316913058|gb|EFV34574.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325486436|gb|EGC88886.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
          Length = 364

 Score =  266 bits (679), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 149/346 (43%), Positives = 213/346 (61%), Gaps = 2/346 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+++++    G    D     L+ L+ +   P  W +   A+ + ++   L + I+   E
Sbjct: 11  KVAQRVEAAHGYLHIDERAAELAKLDEEIAQPGFWDDASHAQSVSKQASVLRDTIAEYDE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D     +LA E  D    +E S  L ++   ++  +  S  S   D  DA L V
Sbjct: 71  AAALLDDARAAFDLASE--DELFAEEASAALDKLDELLDALEISSWFSERFDGGDAILTV 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + G+GG E+QDW +ML RMY R+AEK+ +K   L++  GE  G+  AT+ I+G NA+G L
Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTVLDVVPGEGIGLDKATIQIEGRNAFGML 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP D   RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ
Sbjct: 189 KSESGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPT +VV CQ E+SQ +NK  A+ +L+AKLYE E QKR+E       
Sbjct: 249 CVNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRQEELAELRG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            + +  +G QIR+YVL PYQMVKD+R+ IE  +   VLDG+LD+F+
Sbjct: 309 DRMDNTFGSQIRNYVLYPYQMVKDVRSGIETGNVDAVLDGELDEFV 354


>gi|189347853|ref|YP_001944382.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
 gi|189342000|gb|ACD91403.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
          Length = 249

 Score =  265 bits (678), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 128/246 (52%), Positives = 175/246 (71%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LSG+ D  +A + +HAGAGGTE+QDWA +L RMY RWAE++ FK    +  +G+ AGIK
Sbjct: 1   MLSGKDDPGNAIITIHAGAGGTEAQDWAEILYRMYMRWAERKGFKVYTDDYQEGDGAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +ATL I+G  AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + 
Sbjct: 61  TATLEIQGQYAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKE 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  + T+R+ G GGQ+VN  ++AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+
Sbjct: 121 DLELSTFRSGGKGGQNVNKVETAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQ 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            + ++ E      E  K +I WG QIRSYVL   + +KD RTN E+     VLDGDLD F
Sbjct: 181 RQREEEEAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLDAF 239

Query: 347 MKATLA 352
           M+  L+
Sbjct: 240 MEKYLS 245


>gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9303]
          Length = 319

 Score =  265 bits (678), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 201/307 (65%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+   +   +  IK  +  + D    LEL   E D  +L E    LQ+++  ++  + E
Sbjct: 1   MRQLDEVKAQLVQIKLWRSAVNDAQATLELYDLEPDDEMLSEAQSGLQQLRQGLDRWELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D   A L ++AGAGGT++QDWA MLLRMYTRWAE    +    E+ +GEEAGI
Sbjct: 61  RLLSGEYDKKGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + + P +D  +E++I E
Sbjct: 121 KSATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL 
Sbjct: 181 KDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLM 240

Query: 286 ELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            +  ++R  EIA+I      E  WG QIR+YV  PYQMVKDLRT  E T    V++G+LD
Sbjct: 241 VIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGELD 299

Query: 345 DFMKATL 351
            F++  L
Sbjct: 300 RFIQTLL 306


>gi|94984277|ref|YP_603641.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
 gi|94554558|gb|ABF44472.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
          Length = 380

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 207/326 (63%), Gaps = 6/326 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW N   A+ + +E   L   +   + +Q       
Sbjct: 28  GSTFDIPGKTRRLNELDRELSDPELWNNPSRARQVTQEAGSLRRIVDGYRTLQSDANSLN 87

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LE+A +E+  ++L E  D +Q  +++  Y+  E+L + +     A + V  GAGGTE+
Sbjct: 88  EMLEMASDEER-ALLAEEQDTIQ-ARVDELYR--ETLFTMKHADAPAIVRVKGGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   GE+AG +S   +I+G  A+G +  E GVHRL
Sbjct: 144 QDWAGMLARMYMRWAERRGYKVDVLDEQPGEQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+D+N+RR TSF+S+ V P V ++ I+I I +SD R+D YR+ GAGGQ VNTTDSA
Sbjct: 204 VRVSPFDANNRRQTSFASVDVVPEVPEEQIDIVIPDSDVRVDVYRSQGAGGQGVNTTDSA 263

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG++V  Q  RSQ KN+  A+ +L+ +LY+LE++KREE        + +I WG
Sbjct: 264 VRVTHLPTGIIVAIQVTRSQIKNREMAFQILKQRLYDLEMRKREEEEAKARGEQKKIEWG 323

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSP 335
            QIRSYVL   Q VKD RT + K +P
Sbjct: 324 SQIRSYVLD-KQYVKDHRTGLMKHNP 348


>gi|262340849|ref|YP_003283704.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272186|gb|ACY40094.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 365

 Score =  265 bits (677), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 136/324 (41%), Positives = 217/324 (66%), Gaps = 3/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P+ W++  ++K  +R    +  +I    ++++ L +  I+   + EE+    L+     
Sbjct: 39  NPNFWKDYKKSKDSIRSLHEMKTSIKDFMKLKNALEELEIIFSFSKEENLEKELEIQFHK 98

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             ++   +E+K   +LLS + DS +A L++ +GAGGTES DW +ML+RMY  WAEK  F 
Sbjct: 99  TMKLLSNIEFK---NLLSEKEDSLNAILQISSGAGGTESCDWTSMLMRMYFMWAEKHNFS 155

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            + +    G+  GIKS TL I G  A+G+LKGE GVHRL+RISP+DSNS+RHTSFSS++V
Sbjct: 156 VKKINFISGDITGIKSVTLEIDGIYAFGYLKGENGVHRLIRISPFDSNSKRHTSFSSVYV 215

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP+++D+I+I+I  SD + +T+R+SGAGGQ+VN  ++ VR+ H PTG+ ++  + RSQ +
Sbjct: 216 YPMINDNIDIDIKTSDIQWETFRSSGAGGQNVNKVETGVRLRHHPTGITIENTESRSQMQ 275

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  +L+++L+E+E+ K+ E     +S K +I WG QIR+Y++ PY++VKDLRT  +
Sbjct: 276 NRQKALLLLKSRLFEIEMIKKNEKKEKIKSEKKKIEWGSQIRNYIMHPYKLVKDLRTGYQ 335

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
            T    V+DG++D F+K  L  KK
Sbjct: 336 TTQIQSVMDGEIDTFLKKFLMYKK 359


>gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           AS9601]
 gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           AS9601]
          Length = 354

 Score =  265 bits (677), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N  EAK  M     +   +  + + +  + D    LEL   E +  ++ E+   L
Sbjct: 25  PEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESQLGL 84

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++  ++  +FE LL GE D   A + ++AGAGGT++QDW  +LLRMY+RWA+  +   
Sbjct: 85  KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+  GEEAGIKS T  I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 145 VINELSQGEEAGIKSVTFEIEGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD+I ++I E D  I T R+ GAGGQ+VN  ++AVRI H+P+G+ V+C QERSQ +N
Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L++KL  +  ++R  E+A+I +    E  WG QIR+YV  PYQMVKDLRT  E
Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 VLDG LD F+   L
Sbjct: 324 TNELDSVLDGGLDPFIHELL 343


>gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9301]
 gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9301]
          Length = 354

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W+N  EAK  M     +   +  + + +  + D    LEL   E +  ++ E+   L
Sbjct: 25  PEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESKQGL 84

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++  ++  +FE LL GE D   A + ++AGAGGT++QDW  +LLRMY+RWA+  +   
Sbjct: 85  KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+  GEEAGIKS T  I G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 145 IINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD+I ++I E D  I T R+ GAGGQ+VN  ++AVRI H+P+G+ V+C QERSQ +N
Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L++KL  +  ++R  E+A+I +    E  WG QIR+YV  PYQMVKDLRT  E
Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 VLDG L+ F+   L
Sbjct: 324 TNELDSVLDGGLEPFIHELL 343


>gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9215]
 gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9215]
          Length = 354

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W+N  EAK  M     +   +  + + +  + D    LEL   E +  ++ E+   L
Sbjct: 25  PAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESKQGL 84

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++  ++  +FE LL GE D   A + ++AGAGGT++QDW  +LLRMY+RWA+  +   
Sbjct: 85  KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+  GEEAGIKS T  I G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 145 VINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD+I ++I E D  I T R+ GAGGQ+VN  ++AVRI H+P+G+ V+C QERSQ +N
Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L++KL  +  ++R  E+A+I +    E  WG QIR+YV  PYQMVKDLRT  E
Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 VLDG L+ F+   L
Sbjct: 324 TNDLDSVLDGGLEPFIHELL 343


>gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
          Length = 354

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W+N  EAK  M     +   +  + + +  + D    LEL   E +  ++ E+   L
Sbjct: 25  PAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESKQGL 84

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++  ++  +FE LL GE D   A + ++AGAGGT++QDW  +LLRMY+RWA+  +   
Sbjct: 85  KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMTL 144

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+  GEEAGIKS T  I G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 145 VINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD+I ++I E D  I T R+ GAGGQ+VN  ++AVRI H+P+G+ V+C QERSQ +N
Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L++KL  +  ++R  E+A+I +    E  WG QIR+YV  PYQMVKDLRT  E
Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 VLDG L+ F+   L
Sbjct: 324 TNDLDSVLDGGLEPFIHELL 343


>gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
 gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
          Length = 374

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 138/344 (40%), Positives = 205/344 (59%), Gaps = 1/344 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + +    D D     +  L  +   P LW N   A+ +  +    ++ +  +     R+ 
Sbjct: 18  DSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAESQLKRLTSASQRID 77

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L+EL  EE D   L E  + +  I+ +++  + ++LL GE D   A + + +GAGG
Sbjct: 78  DVETLVELGQEEQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L  E G 
Sbjct: 138 VDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGT 197

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+  RR TSF+++ V P+V+ +  ++I ++D R+DTY +SG GGQ VNTT 
Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHVDIPDTDIRVDTYCSSGPGGQGVNTTY 257

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  
Sbjct: 258 SAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKAS 316

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG Q+RSYVL PYQMVKDLRT  E +    V DGD+++F++A +
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAGI 360


>gi|300741817|ref|ZP_07071838.1| peptide chain release factor 2 [Rothia dentocariosa M567]
 gi|300381002|gb|EFJ77564.1| peptide chain release factor 2 [Rothia dentocariosa M567]
          Length = 375

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 139/327 (42%), Positives = 209/327 (63%), Gaps = 6/327 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
           L+ +   P LW +   A+ +     H    ++ +  +  R+ D  +++ELA  ED+ S  
Sbjct: 36  LSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDVEVMVELAQTEDESSKE 95

Query: 84  -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L E     + ++ +++  +   LLSGE D  +A + + +GAGG ++ D+A MLLRMY 
Sbjct: 96  DLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 155

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEK  + T+ L+    EEAG+KS T  +  P A+G L  E G HRLVRISP+D+  RR
Sbjct: 156 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 215

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV 
Sbjct: 216 QTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVS 275

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321
            Q E+SQ +N+A A  +L+++L  L L++ +E A   E +   +  WG Q+RSYVL PYQ
Sbjct: 276 MQNEKSQIQNRAAALRVLQSRL--LMLRQEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 333

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           MVKDLRT  E+ + S VLDG L+ F++
Sbjct: 334 MVKDLRTGYEEGNTSSVLDGGLNRFIE 360


>gi|311111708|ref|YP_003982930.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
 gi|310943202|gb|ADP39496.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
          Length = 375

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 139/327 (42%), Positives = 209/327 (63%), Gaps = 6/327 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
           L+ +   P LW +   A+ +     H    ++ +  +  R+ D  +++ELA  ED+ S  
Sbjct: 36  LSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDVEVMVELAQTEDESSAE 95

Query: 84  -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L E     + ++ +++  +   LLSGE D  +A + + +GAGG ++ D+A MLLRMY 
Sbjct: 96  DLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 155

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEK  + T+ L+    EEAG+KS T  +  P A+G L  E G HRLVRISP+D+  RR
Sbjct: 156 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 215

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV 
Sbjct: 216 QTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVS 275

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321
            Q E+SQ +N+A A  +L+++L  L L++ +E A   E +   +  WG Q+RSYVL PYQ
Sbjct: 276 MQNEKSQIQNRAAALRVLQSRL--LMLRQEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 333

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           MVKDLRT  E+ + S VLDG L+ F++
Sbjct: 334 MVKDLRTGYEEGNTSSVLDGGLNRFIE 360


>gi|320449740|ref|YP_004201836.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
 gi|320149909|gb|ADW21287.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
          Length = 307

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 136/256 (53%), Positives = 173/256 (67%), Gaps = 3/256 (1%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           KLE  Y   E+LLS      +A L +  GAGGTE+ DWA MLLRMYTR+AE++ F+ E +
Sbjct: 39  KLESLYH--ETLLSFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVV 96

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           ++  G EAGI  A ++++G NAYG L  E GVHRLVR SP+D++ RRHTSF+ + V P V
Sbjct: 97  DVTPGAEAGIDYAQIIVRGENAYGLLAPEAGVHRLVRPSPFDASGRRHTSFAGVEVMPEV 156

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD++E+ I   D RID +R+ G GGQ VNTTDSAVRI H+PTG+ V CQ  RSQ KNK  
Sbjct: 157 DDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAVRIVHLPTGITVTCQTTRSQIKNKEL 216

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +LR++LYELE +K++E           I WG QIRSYVL   Q VKD RT + +  P
Sbjct: 217 AMKVLRSRLYELEWKKKQEELRKLRGEVRPIEWGSQIRSYVLD-KQYVKDHRTGLMRFDP 275

Query: 336 SDVLDGDLDDFMKATL 351
            +VLDGDL DF+ A L
Sbjct: 276 QNVLDGDLLDFIWAGL 291


>gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 374

 Score =  262 bits (669), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+   P LW +   A+ +       ++ +  +     R+ D   L+EL  EE D   L
Sbjct: 36  LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGREEGDQDSL 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    +  I+ +++  + ++LL GE D   A + + +GAGG ++ D+A MLLRMY R+ 
Sbjct: 96  DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+V+ +  I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV  Q 
Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E +    V DGD++ F++A +
Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360


>gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 374

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+   P LW +   A+ +       ++ +  +     R+ D   L+EL  EE D   L
Sbjct: 36  LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    +  I+ +++  + ++LL GE D   A + + +GAGG ++ D+A MLLRMY R+ 
Sbjct: 96  DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+V+ +  I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV  Q 
Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E +    V DGD++ F++A +
Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360


>gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A]
 gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68]
 gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A]
 gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium
           longum subsp. longum F8]
 gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68]
 gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
          Length = 374

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+   P LW +   A+ +       ++ +  +     R+ D   L+EL  EE D   L
Sbjct: 36  LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    +  I+ +++  + ++LL GE D   A + + +GAGG ++ D+A MLLRMY R+ 
Sbjct: 96  DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+V+ +  I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV  Q 
Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E +    V DGD++ F++A +
Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360


>gi|213162329|ref|ZP_03348039.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 194

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/193 (66%), Positives = 154/193 (79%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G 
Sbjct: 2   DCYLDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRA
Sbjct: 62  YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRA 121

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+   
Sbjct: 122 SGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 181

Query: 296 ANIGESSKTEIGW 308
               E +K++IGW
Sbjct: 182 KQAMEDTKSDIGW 194


>gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
 gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
          Length = 374

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+   P LW +   A+ +       ++ +  +     R+ D   L+EL  EE D   L
Sbjct: 36  LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    +  I+ +++  + ++LL GE D   A + + +GAGG ++ D+A MLLRMY R+ 
Sbjct: 96  DEAQGEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P+V+ +  I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV  Q 
Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+A A  +L+++L  L   + E       +   +  WG Q+RSYVL PYQMVKD
Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRT  E +    V DGD++ F++A +
Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360


>gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9312]
 gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 354

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 199/320 (62%), Gaps = 2/320 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W+N   AK  M     +   +  + + +  + D    LEL   E +  ++ E+   L
Sbjct: 25  PEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESQQGL 84

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           ++++  ++  +FE LL GE D   A + + AGAGGT++QDW  +LLRMY+RWA+  +   
Sbjct: 85  KKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              E+  GEEAGIKS T  I G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 145 IINELSQGEEAGIKSVTFEIDGKYAYGYLQYEKGTHRLVRISPFNANGKRQTSFAGVEVM 204

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD+I ++I E D  I T R+ GAGGQ+VN  ++AVRI H+P+G+ V+C QERSQ +N
Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264

Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A  +L++KL  +  ++R  EIA+I +    E  WG QIR+YV  PYQMVKDLRT  E
Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEIADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 VLDG L+ F+   L
Sbjct: 324 TNELDSVLDGGLEPFIHELL 343


>gi|226324356|ref|ZP_03799874.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
 gi|225206804|gb|EEG89158.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
          Length = 313

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/306 (48%), Positives = 211/306 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + + + +  +++++    D   L+EL  EE+D  +++E    + + + E E  +  
Sbjct: 1   MKELRKMQDCVKEVRDLESSYEDINALIELTEEEEDREMIKEIQREIAKFEKEFEDLRIR 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DS +A + +HAGAGGT+S DWANML RMYTR+A+ + F+   L+  DG+  G+
Sbjct: 61  TLLSGEYDSCNAIVTLHAGAGGTDSCDWANMLYRMYTRYAQSKGFQITVLDYQDGDITGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  + G NAYG+ + E+GVHRLVRISP++S  +R TSF+S  V P ++D I+IE+++
Sbjct: 121 KGITFEVTGDNAYGYFQSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEDDIDIELND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ  NK +A  ML+AKLY
Sbjct: 181 DDLRIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQLFNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++EE  +       +I +G QIRSY+L PY +VKD RT  E  + S VLDG+LD 
Sbjct: 241 LLKKQEQEEKVSGIRGEVQDINFGSQIRSYILHPYNLVKDHRTGEETGNVSAVLDGELDP 300

Query: 346 FMKATL 351
           F+ A L
Sbjct: 301 FINAYL 306


>gi|291442144|ref|ZP_06581534.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291345039|gb|EFE71995.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 375

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 143/351 (40%), Positives = 208/351 (59%), Gaps = 6/351 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG    +
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-N 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
              +D  VRITH+PTG++     ERS+ +NK  A N+L+A+L  L  +++EE A + ++ 
Sbjct: 252 PRDSDFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARL--LGRRRQEEQAKM-DAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K E G   G Q+RSY L PYQMVKDLRT  E  +P  V +G++D F++A +
Sbjct: 309 KDEGGNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGI 359


>gi|78044242|ref|YP_359035.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996357|gb|ABB15256.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 371

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/329 (47%), Positives = 218/329 (66%), Gaps = 1/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  KT +P  W N  EA+  ++E   L + I   +E+     +  +LL+L  EE++  + 
Sbjct: 35  LTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEELLKAQEELTVLLQLLEEEENEELA 94

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  D  +++  ++   + E LLSG  D N A + +HAGAGGTE+QDW  ML RMYTRWA
Sbjct: 95  VEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSLHAGAGGTEAQDWVEMLYRMYTRWA 154

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +K E ++   GEEAG+KS T  ++G  AYG+LK E+GVHRL+RISP+D + RRHTS
Sbjct: 155 EDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYLKAERGVHRLIRISPFDFSGRRHTS 214

Query: 206 FSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           F+S+ V P V +D  EIE+ E + +I+T+R+ GAGGQHVN T+SAVRITH+PTG+ V CQ
Sbjct: 215 FASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGGQHVNKTESAVRITHLPTGITVVCQ 274

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQ  N+A A  +L+AKL +LE++K+EE        + EI WG QIR+YV  PY +VK
Sbjct: 275 NERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLRGEQKEIAWGSQIRTYVFHPYSLVK 334

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           D RT +E      V+DG++D F++A L +
Sbjct: 335 DHRTGVEVGDVQGVMDGEIDIFIEAYLKM 363


>gi|226354826|ref|YP_002784566.1| peptide chain release factor 2 [Deinococcus deserti VCD115]
 gi|226316816|gb|ACO44812.1| putative Peptide chain release factor 2 (RF-2) [Deinococcus deserti
           VCD115]
          Length = 383

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 205/342 (59%), Gaps = 6/342 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW +   A+ + +E       +  I E    L  + 
Sbjct: 31  GSTFDIPGKTRRLNELDRELSDPELWNDQSRARQVTQE----SGTLRRIVESYSSLHSDA 86

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             L   LE  D    +   +    ++  V+    E+L + +     A + V  GAGGTE+
Sbjct: 87  QGLNEMLEIADEEEREMLVEEQSSLQTRVDELYRETLFTMKHADTAAIVRVKGGAGGTEA 146

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   G++AG +S   +I+G  AYG +  E GVHRL
Sbjct: 147 QDWAGMLARMYMRWAERRGYKVDILDEQPGDQAGYQSIEFIIRGEKAYGMMAAEHGVHRL 206

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+DSN+RR TSF+S+ V P V ++ I I I +SD R D +R+ GAGGQ VNTTDSA
Sbjct: 207 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 266

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KRE        ++ ++ WG
Sbjct: 267 VRLTHLPTGIAVACQITRSQIKNAELALQILKQRLYDIEVKKREAEEAAARGAQAKVEWG 326

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            Q+RSYVL   Q +KD RT + K +P DVLDGDLD+ M A L
Sbjct: 327 SQMRSYVLDK-QYIKDHRTGLMKHNPDDVLDGDLDELMWAGL 367


>gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 376

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE   D  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q    K++E
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +A   ++S     WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +
Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367

Query: 355 K 355
           K
Sbjct: 368 K 368


>gi|206895563|ref|YP_002247293.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738180|gb|ACI17258.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 370

 Score =  259 bits (662), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 205/331 (61%), Gaps = 1/331 (0%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+    LS +    E P +W +  +A  + R+ Q L+  I  +++I++ L D    LEL 
Sbjct: 27  DDKKAELSDVRKVYEKPDIWSDPDKAVAVARKVQRLEEEIERVEQIENLLKDLDAALELL 86

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E  D  + +     L+ ++  +E  +  +L +   D+NDA L +HAGAGG ++ DW  M
Sbjct: 87  QEGYDEELFEHALATLKELQQRIELFRLVTLFTEPYDTNDAILMLHAGAGGVDAMDWTQM 146

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+RMY RWAE+  F+TE ++I  GEEAG+KS T+ ++G  AYG+L+ E+GVHRLVR+SP+
Sbjct: 147 LMRMYLRWAERMGFETEIVDISRGEEAGVKSCTVFVRGSYAYGYLRAEKGVHRLVRLSPF 206

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           D++ RRHTSF ++       + +E+EI+  D  ++T+R+ GAGGQH N T+S VR+ H P
Sbjct: 207 DADHRRHTSF-ALVDVVPDVEDVEVEINPDDIEVETFRSGGAGGQHQNKTESGVRLIHKP 265

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+ V   +ERSQ +N+ +A  +LRA++++   ++R++             WG QIRSYV
Sbjct: 266 TGITVTVTEERSQLQNRERAMRILRARVHQYHEEERKKSLEEIRGDVKSASWGNQIRSYV 325

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             PY MVKD RT   +    +V+DGD+ DFM
Sbjct: 326 FHPYNMVKDHRTGYSRGDIDNVMDGDITDFM 356


>gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 376

 Score =  259 bits (662), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADMQRLQK 72

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE   D  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q    K++E
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +A   ++S     WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +
Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367

Query: 355 K 355
           K
Sbjct: 368 K 368


>gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
 gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
          Length = 376

 Score =  259 bits (661), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQVDMQRLQK 72

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE   D  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEEAGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q    K++E
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +A   ++S     WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +
Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367

Query: 355 K 355
           K
Sbjct: 368 K 368


>gi|50954999|ref|YP_062287.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951481|gb|AAT89182.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 372

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 138/350 (39%), Positives = 209/350 (59%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D     ++ L+ +   P LW + + A+ +     H  + ++ I  
Sbjct: 12  ELRSTLADITAVVDVDKLRAAIADLSERAGAPDLWDDPVNAQKVTSALSHRQSELARITA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ RL D  +L+ELA E DD     E    L+ ++  +   + ++LLSGE D   A + +
Sbjct: 72  IQQRLDDLEVLVELANEGDDEESAAEARAELEALQKALGDLEVQTLLSGEYDERAAIVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+ K+    ++    E AGIKSAT  +  P A+G L
Sbjct: 132 RSGAGGDDATDFAEMLLRMYLRWAEQHKYPVTVMDTSYAEGAGIKSATFEVDMPYAFGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRL RISP+ S  +R TSF+++ V P+++++ ++++ E D R+D +R+SG GGQ
Sbjct: 192 SVEAGTHRLARISPFGSADKRQTSFAAVEVIPLMEEANQVDVPEGDIRVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+ +L  L+ ++          
Sbjct: 252 SVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNRAAAMRVLQTRLLLLQKEEEAAKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + T   WG Q+RSY L   Q+VKDLRT  E  +P+ V DGDLD F+ A +
Sbjct: 312 NITA-SWGDQMRSYFLYGQQLVKDLRTGYESGNPATVFDGDLDGFIAAGI 360


>gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063]
 gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063]
          Length = 376

 Score =  258 bits (660), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE   D  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILVDAEQTYETLKRDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q    K++E
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +A   ++S     WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +
Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367

Query: 355 K 355
           K
Sbjct: 368 K 368


>gi|222100137|ref|YP_002534705.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572527|gb|ACM23339.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 218

 Score =  258 bits (659), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 124/211 (58%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+LK E GVHRLVRISP+D+  RR
Sbjct: 2   RWAERKGFDVEIVEYQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARRR 61

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P ++D + IEI   D +I+T+RASG GGQHVN T+SAVRITHIPTG+VV 
Sbjct: 62  HTSFASVNVIPEIEDDVHIEIKPEDLKIETFRASGHGGQHVNKTESAVRITHIPTGIVVT 121

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           CQ ERSQH+NK  A  +L+A+LY+LEL+ KR+EI  I +    +I WG QIRSYV  PY 
Sbjct: 122 CQNERSQHQNKQTALKILKARLYQLELEKKRKEIQEI-QGELKDISWGNQIRSYVFHPYT 180

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +VKD RT +E ++   V+DGD+D F++A L 
Sbjct: 181 LVKDHRTGVETSNVDAVMDGDIDIFIEAELV 211


>gi|15807620|ref|NP_293897.1| peptide chain release factor 2 [Deinococcus radiodurans R1]
          Length = 421

 Score =  258 bits (659), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 153/350 (43%), Positives = 214/350 (61%), Gaps = 22/350 (6%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQ--D 64
           G  FD     +RL+ L+ +  DP LW +   A+ + +E    R+ ++       + Q   
Sbjct: 69  GSTFDIPGKTRRLNELDRELSDPDLWNDQSRARQVTQEAGSVRKIVEEYAGLTSDAQGLS 128

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            + D     E  L ED+ + LQ+  D+L R          E+L + +     A + V  G
Sbjct: 129 EMLDLADEEERELLEDEQAGLQKRVDDLYR----------ETLFTMKHADTAAIVRVKGG 178

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA ML RMY RWAE+R +K + L+   G++AG +S   +I+G  A+G +  E
Sbjct: 179 AGGTEAQDWAGMLARMYMRWAERRGYKVDILDEVAGDQAGYQSIEFIIRGEKAFGMMAPE 238

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHV 243
            GVHRLVR+SP+DSN+RR TSF+S+ V P V ++ I I I +SD R D +R+ GAGGQ V
Sbjct: 239 HGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGV 298

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGES 301
           NTTDSAVR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KR  EE+A  G+ 
Sbjct: 299 NTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMKKREAEELAARGQQ 358

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K E  WG Q+RSYVL   Q +KD RT +   +P DVLDGDLD+ M A L
Sbjct: 359 AKVE--WGSQMRSYVLD-KQYIKDHRTGLMMHNPDDVLDGDLDELMWAGL 405


>gi|239933740|ref|ZP_04690693.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 359

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/347 (40%), Positives = 206/347 (59%), Gaps = 6/347 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + ++ R+
Sbjct: 1   MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG    +   +
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-NPRDS 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           D  VRITH+PTG++     ERS+ +NK  A N+L+A+L  L  +++EE A + ++ K E 
Sbjct: 240 DFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARL--LGRRRQEEQAKM-DALKDEG 296

Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G   G Q+RSY L PYQMVKDLRT  E  +P  V +G++D F++A +
Sbjct: 297 GNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGI 343


>gi|270285531|ref|ZP_06194925.1| peptide chain release factor 2 [Chlamydia muridarum Nigg]
 gi|301336928|ref|ZP_07225130.1| peptide chain release factor 2 [Chlamydia muridarum MopnTet14]
          Length = 220

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 155/214 (72%), Gaps = 1/214 (0%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           ++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K EI WG QIR+YV QP
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQIRNYVFQP 180

Query: 320 YQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           Y +VKD+RT  E  +   ++DG+ LD F+KA LA
Sbjct: 181 YTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 214


>gi|300087667|ref|YP_003758189.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527400|gb|ADJ25868.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 327

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 204/323 (63%), Gaps = 15/323 (4%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA---LEEDDCSILQETSDN 91
            W++   ++ +MR    L   +   + ++ RL +   L  L    + +D  +  +  SD 
Sbjct: 7   FWEDSDNSQKVMRRLTGLKKTVEQWRSLERRLNELAELDALGDPEMAQDVDAETEAVSDE 66

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L R++ E+ Y       SGE D  +A L +HAGAGG ESQDWA MLL MY +W E+R + 
Sbjct: 67  LDRLEFELSY-------SGEYDERNALLSIHAGAGGVESQDWAEMLLAMYVKWGERRDYD 119

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E LE   G+EAGIKS T   +G  AYG L+ E GVHRL+R+SP+DS+  RHTSF+ + V
Sbjct: 120 VEILETSAGDEAGIKSVTAEFRGRYAYGNLRSEHGVHRLIRLSPFDSDHARHTSFALVEV 179

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P V++  E+EI+  D +++ +RASGAGGQ+V    SAVR+TH P+G+VV  Q ERSQH+
Sbjct: 180 MPEVEEDAEVEINPDDIKLEAFRASGAGGQNVQKVSSAVRLTHTPSGIVVTAQTERSQHQ 239

Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           N+  A ++LRA+L + ++ ++E E A + GE    E  WG QIRSYVL PY+MVKD RT 
Sbjct: 240 NREVAMSLLRARLLQRKIAEQEAEKARLKGERISNE--WGSQIRSYVLHPYKMVKDHRTG 297

Query: 330 IEKTSPSDVL-DGDLDDFMKATL 351
           +E  +   VL +G+++ F++A L
Sbjct: 298 METGNTQAVLEEGNIEMFIEAYL 320


>gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829]
 gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
 gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
          Length = 375

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 191/326 (58%), Gaps = 2/326 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSI 84
           L  +  +   W +   A  +M +   L   ++        L D     ELA     D  +
Sbjct: 40  LTVQAGETTFWNDAAHATEVMAQLGALKEKLNQYDSAYKLLLDVQAAFELADTSSQDDEM 99

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L E      ++   ++  +  +  + E D+  A + +  G GG E+QDW +ML +MY  +
Sbjct: 100 LIEAKRLANKLTNVLDNLELNTWFNDEFDTGAAIVTITPGQGGLEAQDWCDMLFKMYLHY 159

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            E++ +  +  +   GE  GI  AT  + G NAYG L+ EQGVHRLVRISP D+  RR T
Sbjct: 160 CERKSWTVDINDAPVGEVIGIDRATFTVTGKNAYGMLRAEQGVHRLVRISPTDAKKRRQT 219

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           +F+ + V PV+  +IE++I   D RID Y ASG GGQ VNTTDSAVRITHIPTG+VV CQ
Sbjct: 220 TFAGVEVLPVLPQTIEVQIDTQDIRIDVYHASGPGGQGVNTTDSAVRITHIPTGIVVTCQ 279

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQ +NKA A  +LR+KLYELE Q+REE  +     K +I WG QIR+Y+L P+Q+VK
Sbjct: 280 NERSQLQNKAAAMQILRSKLYELEKQRREEELDDLRGPKHDISWGNQIRNYILYPFQLVK 339

Query: 325 DLRTNIEKTSPSDVL-DGDLDDFMKA 349
           D RT +E  +   VL +GDLD F+ A
Sbjct: 340 DTRTQVETGNVDAVLQEGDLDQFIIA 365


>gi|150004050|ref|YP_001298794.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254882894|ref|ZP_05255604.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294778088|ref|ZP_06743522.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|319639698|ref|ZP_07994431.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
 gi|149932474|gb|ABR39172.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254835687|gb|EET15996.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294448146|gb|EFG16712.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|317388662|gb|EFV69508.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/348 (41%), Positives = 212/348 (60%), Gaps = 15/348 (4%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D +N + ++     +T+ P  W +  +A+  MR+ + L   I   +E++  + D L   
Sbjct: 21  LDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREVK-TMADEL--- 76

Query: 74  ELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ELA +  +DD    +E     Q+    VE  + +++L  EAD  D  L+++ GAGGTESQ
Sbjct: 77  ELAFDFCKDDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKINCGAGGTESQ 136

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE   +K     + DG+EAGIK+ T+ I+G  AYG+LKGE GVHRLV
Sbjct: 137 DWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFAYGYLKGENGVHRLV 196

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S VR
Sbjct: 197 RVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQNVNKVESGVR 256

Query: 252 ITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E     E+ K
Sbjct: 257 LRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 317 KKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363


>gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 406

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 133/335 (39%), Positives = 211/335 (62%), Gaps = 7/335 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED- 80
           RL+ L  +     LW +   A+  + +   +   +  +++ ++++ +  +++EL  E++ 
Sbjct: 61  RLADLELQASQDTLWDDPDAAQRTLSDLAEVKENLDLLQQFENKVEEAQLIIELMGEKEG 120

Query: 81  -DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
            D  ++QE S+ +  +   ++  +   LLSG  D   A + + AGAGGT++QDWA MLLR
Sbjct: 121 PDGGLVQEASEIVSWLSNALDKFELAKLLSGPYDRRGARVTISAGAGGTDAQDWAEMLLR 180

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+RWAEK+ +  + +E   GEEAGIKS T  + G  AYG+L  E+G HRLVR SP+++ 
Sbjct: 181 MYSRWAEKQGYTVKVMEKSPGEEAGIKSVTFEVDGRFAYGYLASEKGTHRLVRQSPFNAK 240

Query: 200 SRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R TSF+ + V P+  ++S+++EI E++  + T RA G GGQ+VN  ++AVRI HIPTG
Sbjct: 241 GLRQTSFAGVEVMPIFEEESLDVEIPETELEVTTTRAGGKGGQNVNKVETAVRIVHIPTG 300

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANI-GESSKTEIGWGRQIRSYV 316
           + V+C +ERSQ  NK +   +L+AKL  + L QK  ++  I G+  K E  WG+QIR+YV
Sbjct: 301 IAVRCTEERSQLANKIKGLRLLKAKLLVIALEQKASDLKEIRGDVVKAE--WGQQIRNYV 358

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             PY++VKD+RT  E +  + V+DG+L  F+ A L
Sbjct: 359 FHPYKLVKDVRTATETSDVAGVMDGELGSFITAFL 393


>gi|281205221|gb|EFA79414.1| class I peptide chain release factor [Polysphondylium pallidum
           PN500]
          Length = 434

 Score =  255 bits (652), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 203/316 (64%), Gaps = 11/316 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++E Q L   I  I+E+Q        +   A +++D S+L E S+ +  +  +    +F+
Sbjct: 123 LKECQRLKRDIEQIEELQSNFMYYEEISGEAKKKNDQSMLSEMSECISDLYQQSTDLEFK 182

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           S++SGE D  D YLE+HAGAGG +S DW+ +L  MY +W++++ FK   ++I  GE  G 
Sbjct: 183 SIMSGENDHEDCYLEIHAGAGGADSMDWSEILSNMYRKWSQRKDFKVTLVDISPGE-VGY 241

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K A L I+G  AYGW + E GVH+L+R+SP+DS+ +RHTSF+S+  YP VDDSI I++  
Sbjct: 242 KRAILKIEGEFAYGWCRSESGVHKLIRLSPFDSSGKRHTSFASVLAYPAVDDSISIDLQT 301

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  I+T R+SG GGQH N T+SAVRITH PTG+ V    +RSQH+NK+ A ++L+AK+ 
Sbjct: 302 KDLLIETMRSSGPGGQHSNKTESAVRITHTPTGISVAVSDQRSQHQNKSIAMDLLKAKIM 361

Query: 286 ELELQKREEIANIGESSKTEI---GWG--RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
             E++KR   A   ES ++++   GW   R +R+Y + P   VKD RTN+E  +  ++L+
Sbjct: 362 ASEIKKR---AQQEESFRSDLGVNGWASDRIVRTYTMHPQTRVKDQRTNLESLNIDEILE 418

Query: 341 G--DLDDFMKATLAIK 354
           G  +LD F+K  L+ K
Sbjct: 419 GGDELDIFIKTALSQK 434


>gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299]
 gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299]
          Length = 428

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 144/361 (39%), Positives = 216/361 (59%), Gaps = 27/361 (7%)

Query: 20  VQRLSF----LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           V+RL+     L+    +  LW + I+AK +M E       ++  +  ++ L D  + LE+
Sbjct: 56  VERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQLATARGFENLLGDAAVALEM 115

Query: 76  --ALEEDDC---------------SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
             A  EDD                +IL E SD    ++ +++  +   LL G+ D+  A 
Sbjct: 116 IDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQLDKWEVRRLLGGKYDAMPAL 175

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + V+AGAGGT++QDWA ML RMY  W   R F    +E  +GEEAG+KS T  ++G  AY
Sbjct: 176 VNVYAGAGGTDAQDWAEMLERMYRGWCNSRGFTWRTVERSEGEEAGLKSVTFEVQGRFAY 235

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRAS 236
           G+L+ E+G HRLVR SP+  ++ R TSF+++ V PV+D+    E+ + +SD  I T R+ 
Sbjct: 236 GYLRSERGTHRLVRQSPFKKDATRQTSFAAVEVTPVLDEGSVEELTLRDSDLEISTMRSG 295

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEI 295
           GAGGQ+VN  ++AVRI H+PTG+ V+C++ERSQ  NKA+    L+AKL  + E Q+  ++
Sbjct: 296 GAGGQNVNKVETAVRIKHVPTGITVRCEEERSQAANKAKGLARLKAKLVAVAEEQRAADV 355

Query: 296 ANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           A I G++ + E  WG+QIR+YV  PY+MVKD+RT  E +    V+ GDLD+FM   L  K
Sbjct: 356 AAIRGDAVRAE--WGQQIRNYVFHPYKMVKDVRTGKETSDVDGVMSGDLDEFMDEFLRWK 413

Query: 355 K 355
           +
Sbjct: 414 R 414


>gi|283457761|ref|YP_003362349.1| protein chain release factor B [Rothia mucilaginosa DY-18]
 gi|283133764|dbj|BAI64529.1| protein chain release factor B [Rothia mucilaginosa DY-18]
          Length = 421

 Score =  255 bits (651), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 213/330 (64%), Gaps = 6/330 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
           L+ +   P LW +V  A+ +     +  + ++ ++ +  R+ D  +++ELA  ED+ +  
Sbjct: 82  LSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRSLSSRIDDVEVMVELAEAEDEETAA 141

Query: 84  -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L +       I+ ++E  +   LLSGE D  +A + + +GAGG ++ D+A MLLRMY 
Sbjct: 142 ELLADAERECAEIRAKLEELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 201

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEK  + T+ L+    EEAG+KS T  +  P A+G L  E G HRLVRISP+D+  RR
Sbjct: 202 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 261

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV 
Sbjct: 262 QTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHLPTGIVVS 321

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321
            Q E+SQ +N+A A  +L+++L  L L+K +E A   E +   +  WG Q+RSYVL PYQ
Sbjct: 322 MQNEKSQLQNRAAALRVLQSRL--LLLRKEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 379

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKDLRT  E+ + S+VLDG L+ F+ A +
Sbjct: 380 MVKDLRTGYEEGNTSNVLDGGLNAFIDAGI 409


>gi|255327042|ref|ZP_05368118.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
 gi|255296259|gb|EET75600.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
          Length = 375

 Score =  255 bits (651), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 213/330 (64%), Gaps = 6/330 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
           L+ +   P LW +V  A+ +     +  + ++ ++ +  R+ D  +++ELA  ED+ +  
Sbjct: 36  LSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRSLSSRIDDVEVMVELAEAEDEETAA 95

Query: 84  -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L +       I+ ++E  +   LLSGE D  +A + + +GAGG ++ D+A MLLRMY 
Sbjct: 96  ELLADAERECAEIRAKLEELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 155

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEK  + T+ L+    EEAG+KS T  +  P A+G L  E G HRLVRISP+D+  RR
Sbjct: 156 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 215

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV 
Sbjct: 216 QTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHLPTGIVVS 275

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321
            Q E+SQ +N+A A  +L+++L  L L+K +E A   E +   +  WG Q+RSYVL PYQ
Sbjct: 276 MQNEKSQLQNRAAALRVLQSRL--LLLRKEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 333

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           MVKDLRT  E+ + S+VLDG L+ F+ A +
Sbjct: 334 MVKDLRTGYEEGNTSNVLDGGLNAFIDAGI 363


>gi|212692934|ref|ZP_03301062.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|237708323|ref|ZP_04538804.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|237723533|ref|ZP_04554014.1| peptide chain release factor RF-2 [Bacteroides sp. D4]
 gi|265757045|ref|ZP_06090907.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
 gi|212664519|gb|EEB25091.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|229438084|gb|EEO48161.1| peptide chain release factor RF-2 [Bacteroides dorei 5_1_36/D4]
 gi|229457544|gb|EEO63265.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|263233544|gb|EEZ19173.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 212/348 (60%), Gaps = 15/348 (4%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D +N + ++     +T+ P  W +  +A+  MR+ + L   I   +E++  + D L   
Sbjct: 21  LDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREVK-TMADEL--- 76

Query: 74  ELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ELA +  +DD    +E     Q+    VE  + +++L  EAD  D  L+++ GAGGTESQ
Sbjct: 77  ELAFDFCKDDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKINCGAGGTESQ 136

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RMY RWAE   +K     + DG+EAGIK+ T+ I+G  +YG+LKGE GVHRLV
Sbjct: 137 DWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFSYGYLKGENGVHRLV 196

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S VR
Sbjct: 197 RVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQNVNKVESGVR 256

Query: 252 ITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E     E+ K
Sbjct: 257 LRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 317 KKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363


>gi|313204692|ref|YP_004043349.1| bacterial peptide chain release factor 2 (brf-2) [Paludibacter
           propionicigenes WB4]
 gi|312444008|gb|ADQ80364.1| bacterial peptide chain release factor 2 (bRF-2) [Paludibacter
           propionicigenes WB4]
          Length = 368

 Score =  254 bits (649), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 210/332 (63%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  MR+ + L N ++    ++    +  +  +   EE   ++ +E 
Sbjct: 36  RTQVPGFWDDAKAAEAQMRKVKELKNWVTGYNAVKTAADELQLAFDFYKEE---AVSEEE 92

Query: 89  SDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            D   R  +E+ E  + +++LS E D   A +++  GAGGTE+QDWA+ML RMY RW E+
Sbjct: 93  VDEAYRHAMELLENIEMKNMLSHEEDKLGAVIKIVGGAGGTEAQDWASMLFRMYQRWCER 152

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + +  E   + +G+EAGIK+ T+ I+G  AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 153 QGYACEITNLQEGDEAGIKTVTMQIEGEMAYGYLKSENGVHRLVRVSPFNAQGKRMTSFT 212

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR--------ITHIPTGV 259
           S++V P+VDD+IEIE++      DT+R+SGAGGQ+VN  ++ VR        +T+ P  +
Sbjct: 213 SVYVVPLVDDTIEIEVNPGMLSWDTFRSSGAGGQNVNKVETGVRLHYKFVNPVTNQPDEI 272

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           V++  + RSQ  NK  A  +L+++LYELEL+KR     + E+ K +I WG QIRSYV   
Sbjct: 273 VIENTESRSQFGNKDNAIRLLKSQLYELELEKRRAATAVVEAGKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + ++ + V+DGD+D F+KA L
Sbjct: 333 -RRVKDHRTNYQTSNVNGVMDGDIDAFIKAYL 363


>gi|325280722|ref|YP_004253264.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
 gi|324312531|gb|ADY33084.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
          Length = 370

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/346 (40%), Positives = 211/346 (60%), Gaps = 11/346 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D D     L  +  +T+ P  W +  +A+ +M++ + L   I   + +   + D  +L 
Sbjct: 21  LDIDRKKIELEEVEMRTQAPDFWNDAKQAEKVMKQVRELKGWIEGCEAVSRSVDDLNVLF 80

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           + A E +     +E   +       VE  + +++L GEAD     L++++GAGGTESQDW
Sbjct: 81  DFAKEGEATE--EEVDTHYAETLQLVEELELKNMLRGEADQMSCILKINSGAGGTESQDW 138

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML+RMY RWAE   +K     I +G+EAGIK+ TL ++G  AYG+LKGE GVHRLVR+
Sbjct: 139 ASMLMRMYMRWAEANNYKLTVSNIQEGDEAGIKTVTLQLEGDFAYGYLKGENGVHRLVRV 198

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++  +R TSF+S++V P+VDDSIEI I+ +D   DT+R+ GAGGQ+VN  ++ VR+ 
Sbjct: 199 SPFNAQGKRMTSFASVFVTPLVDDSIEIAINAADISWDTFRSGGAGGQNVNKVETGVRLR 258

Query: 254 H----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           +      TG    ++++  + RSQ  N+  A  +LR+ LY++ELQ+R       ES+K +
Sbjct: 259 YNYKDPDTGETREILIENTETRSQLDNRENAMRLLRSMLYDMELQRRMAEQQKIESNKKK 318

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L
Sbjct: 319 IEWGSQIRSYVFDD-RRVKDHRTNFQTSDVGGVMDGKIDGFIKAYL 363


>gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
 gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
          Length = 378

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/358 (37%), Positives = 215/358 (60%), Gaps = 17/358 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL    + +  + D     ++++ L  +   P LW +   A+ + +      + +  ++ 
Sbjct: 12  KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71

Query: 62  IQDRLCDNLILLELALEE--------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           ++ RL D   L+EL  EE        D  +I+++     + +  ++   +  +LL+GE D
Sbjct: 72  MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
              A + + +GAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAGIKSAT  I 
Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P AYG L  E G HRL R+SP+++  +R TSF+++ V P+++ +  I++ ESD +ID +
Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELEL 289
           R+SG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L    ++ E 
Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +K++E+A   ++S     WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+
Sbjct: 312 EKKKELAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDTFI 364


>gi|134104518|pdb|2IHR|1 Chain 1, Rf2 Of Thermus Thermophilus
          Length = 365

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 158/350 (45%), Positives = 214/350 (61%), Gaps = 5/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L  LGG+FD      RL  L  + EDP LW +   A+ + +E   L   +   + 
Sbjct: 5   RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L   L L+E    E+  ++  E  +  +  KL+  Y Q  +LL+      +A L +
Sbjct: 65  LESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE       
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L
Sbjct: 301 EVRPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 349


>gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
 gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
          Length = 378

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/358 (37%), Positives = 215/358 (60%), Gaps = 17/358 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL    + +  + D     ++++ L  +   P LW +   A+ + +      + +  ++ 
Sbjct: 12  KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71

Query: 62  IQDRLCDNLILLELALEE--------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           ++ RL D   L+EL  EE        D  +I+++     + +  ++   +  +LL+GE D
Sbjct: 72  MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
              A + + +GAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAGIKSAT  I 
Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P AYG L  E G HRL R+SP+++  +R TSF+++ V P+++ +  I++ ESD +ID +
Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELEL 289
           R+SG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L    ++ E 
Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +K++E+A   ++S     WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+
Sbjct: 312 EKKKELAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDAFI 364


>gi|323359619|ref|YP_004226015.1| protein chain release factor B [Microbacterium testaceum StLB037]
 gi|323275990|dbj|BAJ76135.1| protein chain release factor B [Microbacterium testaceum StLB037]
          Length = 370

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/324 (44%), Positives = 202/324 (62%), Gaps = 3/324 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P LW +V  A+ +     H    +  I EI+ RL D  +L+ELA+E DD     E    L
Sbjct: 43  PDLWDDVDNAQKVTSRLSHRQAELKRITEIEQRLDDLEVLVELAIEMDDEDSADEARREL 102

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             +K  +   + ++LL GE DS  A + + +GAGG ++ D+A MLLRMY RWAE+ K+  
Sbjct: 103 ASLKDVIGQLEVQTLLDGEYDSRSAVVTIRSGAGGDDATDFAEMLLRMYLRWAERHKYPV 162

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           + ++    E AGIKSAT  +  P AYG L  E G HRL RISP+    +R TSF+++ V 
Sbjct: 163 KVMDTSYAEGAGIKSATFEVDVPYAYGTLSVEAGTHRLARISPFGGADKRQTSFAAVEVI 222

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           PV+++++E+E+ E D R+D +R+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQ +N
Sbjct: 223 PVMEEAVEVEVPEGDIRVDVFRSSGPGGQSVNTTDSAVRITHIPTGLVVSMQNEKSQIQN 282

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +A A  +L+ +L  L L++ EE A   E + T    WG Q+RSY L   Q+VKDLRT  E
Sbjct: 283 RAAAMRVLQTRL--LLLKREEEAAKKKELAGTITASWGDQMRSYFLYGQQLVKDLRTGYE 340

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +P+ V DGDLD  + A +  +K
Sbjct: 341 VGNPAVVFDGDLDGLIAAGIRWRK 364


>gi|224025165|ref|ZP_03643531.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
 gi|224018401|gb|EEF76399.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
          Length = 371

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 142/351 (40%), Positives = 209/351 (59%), Gaps = 11/351 (3%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L    D DN   ++     +T+ P  W +  +A+  M++ + L N I    E++  L D
Sbjct: 16  ALHRYLDIDNKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQNWIEGYNEVK-TLAD 74

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L  L     +D+     E  D   +    +E  + +++L  EAD  D  L++++GAGGT
Sbjct: 75  EL-ELSFDFYKDELVTEAEVDDAYNKAMQAIEELELKNMLRSEADQMDCVLKINSGAGGT 133

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWA+ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVH
Sbjct: 134 ESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLKGENGVH 193

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+VN  +S
Sbjct: 194 RLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNVNKVES 253

Query: 249 AVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
            VR+ +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E     E
Sbjct: 254 GVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVE 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 314 AGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363


>gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis]
          Length = 426

 Score =  251 bits (642), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 141/344 (40%), Positives = 213/344 (61%), Gaps = 10/344 (2%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D  +  +R++ L        LW+    A  ++++   L   ++ ++    +L D  + +E
Sbjct: 64  DLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLTALREEVAALERFCGQLEDLGVAME 123

Query: 75  LALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L LE +D +  Q  +     I       +E  +   LL G  D   A L + AGAGGT++
Sbjct: 124 L-LEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRLLGGPYDDRGAVLTIQAGAGGTDA 182

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAEK+  +T  ++   GEEAGIKS  + + G  AYG+L GE+G HRL
Sbjct: 183 QDWAEMLERMYLRWAEKQGHRTRVVDRQQGEEAGIKSVEIEVDGRYAYGYLHGEKGTHRL 242

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR SP+++ + R TSF+++ V P++ + + E+E+ ESD  I T R++GAGGQ+VN  ++A
Sbjct: 243 VRQSPFNAKAARQTSFAAVEVMPMLGELVDEVELPESDLEITTMRSAGAGGQNVNKVETA 302

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIG 307
           VRI H+PTG+ V+CQ ERSQ +NK+ A  ML+AKL  + + Q+ +E+A I G+  K E  
Sbjct: 303 VRIKHLPTGIAVKCQMERSQAQNKSIALGMLKAKLLVVAQEQQLQEVAEIRGDLVKAE-- 360

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L  FM+A L
Sbjct: 361 WGQQIRNYVFHPYKLVKDVRTGQETSDVAGVMDGELQPFMQAYL 404


>gi|325283910|ref|YP_004256451.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
 gi|324315719|gb|ADY26834.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
          Length = 365

 Score =  251 bits (642), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 207/335 (61%), Gaps = 5/335 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L    D     +RL+ L+    DP LW +   A+ + +E   +   +   + 
Sbjct: 3   ELQEKLASLREYLDIPGKERRLNELDHFLADPELWNDQNRARSITQEATSVRGVVEKYQG 62

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L     +LELA  ED+  +L E    +++ +++  Y+  E+L + +     A + V
Sbjct: 63  LKSDLDGLAEMLELAESEDEREMLLEEQGGIEQ-RVDELYR--ETLFTMKHADTPAIIRV 119

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+QDWA ML RMY RWAE+R ++ + L+   G++AG +S   +I+G  AYG +
Sbjct: 120 KGGAGGTEAQDWAGMLARMYMRWAERRGYRVDILDEQPGDQAGYQSIEFIIRGEKAYGMM 179

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
             E GVHRLVR+SP+DSN+RR TSF+S+ V P V ++ I+I I +SD R D +R+ G+GG
Sbjct: 180 SAEHGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEIDIHIPDSDLRRDVFRSQGSGG 239

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KREE A    
Sbjct: 240 QGVNTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMRKREEEALAAR 299

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
             ++ + WG Q+RSYVL   Q +KD R+ + + +P
Sbjct: 300 GQQSSVEWGSQMRSYVLDK-QYIKDHRSGLMQHNP 333


>gi|332827204|gb|EGJ99978.1| hypothetical protein HMPREF9455_03672 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 318

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/265 (49%), Positives = 186/265 (70%), Gaps = 10/265 (3%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +KL VE  + +++L  E D   A L+V++GAGGTE QDWA+ML RMY RW + R +KT  
Sbjct: 49  VKL-VENLELKNMLRREEDKLGAVLKVNSGAGGTEGQDWASMLFRMYQRWCDARGYKTTI 107

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
               DG+EAGIK+ATL ++G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+
Sbjct: 108 THWQDGDEAGIKTATLQVEGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVYVVPL 167

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQE 266
           VDD+IEIE+++SD   DT+R+SGAGGQ+VN  ++ VR+ +      TG    +V++  + 
Sbjct: 168 VDDTIEIEVNQSDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTES 227

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  NK  A  +L+++LYE+EL++R    +  E+ K +I WG QIRSYV    + VKD 
Sbjct: 228 RSQFGNKDNAIRLLKSQLYEMELERRSREQSKIEAGKKKIEWGSQIRSYVFDD-RRVKDH 286

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RTN + ++ + V+DGDLDDF+KA L
Sbjct: 287 RTNYQTSNVNAVMDGDLDDFIKAYL 311


>gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 373

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/351 (40%), Positives = 209/351 (59%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L       D  N V +   L      P  W N  +AK  M     + + +  + +
Sbjct: 13  ELTKRLGNAQDCLDVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNLDDVRDQLQLLDK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D    LEL   E +  ++ E+   L  ++  ++  +F+ LL GE D   A + +
Sbjct: 73  WKMFISDAEASLELYSLEPEEEMIVESHQGLVTLRENLDKWEFQRLLCGEYDKEAAIVSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDW  +LLRMY+RW +      E  ++ DGEEAGIKS T  + G  AYG+L
Sbjct: 133 NAGAGGTDAQDWVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKSVTFEVNGKYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ + V P +D SI ++I + D  I T R+ GAGGQ
Sbjct: 193 QNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDQSISLDIPDKDLEITTSRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGE 300
           +VN  ++AVRI H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R  EI++I +
Sbjct: 253 NVNKVETAVRIVHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRASEISDI-K 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               E  WG QIR+YV  PYQMVKDLRT  E      VL+G LD F+   L
Sbjct: 312 GDIVEAAWGNQIRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQFIHELL 362


>gi|213580224|ref|ZP_03362050.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 209

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/199 (63%), Positives = 151/199 (75%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTGVVVQCQQERSQH 270
           ITHIPTG+V QCQ +RSQH
Sbjct: 191 ITHIPTGIVTQCQNDRSQH 209


>gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9515]
 gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9515]
          Length = 354

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 207/340 (60%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD  + V +   L     +P  W N   AK  M     + + +  + + +  + D    
Sbjct: 5   VFDVPSLVAKRKELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADAEAS 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL   + +  ++ E+   L  ++  ++  +F+ LLSGE D   A + ++AGAGGT++QD
Sbjct: 65  LELYSLDPEEEMIVESHLGLVTLRENLDKWEFQRLLSGEYDKESAIVSINAGAGGTDAQD 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  +LLRMY+RWA+      E  ++ +GEEAGIKS T  + G  AYG+L+ E+G HRLVR
Sbjct: 125 WVEILLRMYSRWADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+ + V P +D SI +EI + D  I T R+ GAGGQ+VN  ++AVRI
Sbjct: 185 ISPFNANGKRQTSFAGVEVMPKLDQSISLEIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
            H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R  EI++I +    E  WG Q
Sbjct: 245 LHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDI-KGDIVEAAWGNQ 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PYQMVKDLRT  E      VL+G LD F+   L
Sbjct: 304 IRNYVFHPYQMVKDLRTMKETNDLDGVLNGGLDQFIHELL 343


>gi|261881148|ref|ZP_06007575.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
 gi|270332153|gb|EFA42939.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
          Length = 374

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 209/332 (62%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L N +    +++  L  N + L     +++    +E 
Sbjct: 36  RTQAPDFWDDPKRAEAQMKKVKGLQNWLKDYSDVE--LLANELELAFDYYKEELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +  ++   +E  +F+++L  E DS DA L++++GAGGTESQDWA ML+RMY RW E  
Sbjct: 94  DADYAKVIKAIEDLEFKNMLRSEEDSMDAVLKINSGAGGTESQDWAQMLMRMYMRWCESH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +K     + DG+EAGIKS T+ ++G   AYG+LK E GVHRLVR+SPY++  +R TSF+
Sbjct: 154 GYKVTITNLQDGDEAGIKSVTMTVEGGEFAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S+++ P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG    +
Sbjct: 214 SVFISPLVDDTIEVYVDPARLSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEKEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q KNKA+A  +L+++LY+ E++KR E     E+ K +I WG QIRSYV   
Sbjct: 274 LIENTETRDQPKNKAKAMLLLKSQLYDREMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +    V+DGDLD F+KA L
Sbjct: 334 -RRVKDHRTNYQTSDVDGVMDGDLDGFIKAYL 364


>gi|332299528|ref|YP_004441449.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176591|gb|AEE12281.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 373

 Score =  248 bits (633), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 150/364 (41%), Positives = 218/364 (59%), Gaps = 23/364 (6%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   LG   D D    +L     +T+ P  W +V  A+  MR    + + I   + 
Sbjct: 9   ELLERTKALGRYLDIDQRRVQLEEEELRTQAPDFWDDVPRAQQQMRRVGEIRSWIEAFEA 68

Query: 62  IQDRLCDNLILL-----ELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSN 115
           + D     + L      E A+EE      Q+  D   R IKL VE  +  ++LS E D  
Sbjct: 69  V-DAATQEVALAYDFYKEEAIEE------QDVDDAYARAIKL-VEDLELRNMLSAEEDRL 120

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A L+++AGAGGTESQDWA+ML+RMY RWAE+  +K       DG++AGIK+ T+ I+G 
Sbjct: 121 GAVLKINAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDGDDAGIKTVTMQIEGE 180

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+E++      DT+R+
Sbjct: 181 LAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEVEVNPGLLSWDTFRS 240

Query: 236 SGAGGQHVNTTDSAVRI----THIPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           SGAGGQ+VN  ++ VR+    T   TG    +V++  + RSQ  N+  A  +LR++LY+ 
Sbjct: 241 SGAGGQNVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDNRENALRLLRSQLYDK 300

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           EL++R    +  E++K +I WG QIRSYV    + VKD RT  + +  + V+DGDLD F+
Sbjct: 301 ELERRRAAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQTSDVNGVMDGDLDAFI 359

Query: 348 KATL 351
           KA L
Sbjct: 360 KAYL 363


>gi|293977889|ref|YP_003543319.1| bacterial peptide chain release factor 2 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667820|gb|ADE35455.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Sulcia
           muelleri DMIN]
          Length = 345

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 111/249 (44%), Positives = 171/249 (68%), Gaps = 6/249 (2%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F     G+ D+ +A L++ AGAGGTES DWA+ML RMY  WAEK  FK + +    G+ 
Sbjct: 101 EFTKFFFGKEDNLNAVLQISAGAGGTESCDWASMLYRMYIMWAEKHNFKIKKINSLQGDI 160

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++S T ++KG + +G+LKGE GVHRLVRISP+D NS+RHTSF+S+++YP++DD I I+
Sbjct: 161 IGLRSITFIVKGLSPFGYLKGENGVHRLVRISPFD-NSKRHTSFASVYIYPLIDDDINIK 219

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ SD   +T+R+ G+GGQ+VN  +S VR+ H PT ++++  + +SQ  NK +A  +L++
Sbjct: 220 INTSDISWNTFRSRGSGGQNVNKVESGVRLHHHPTNIIIENSETKSQFNNKIKALKLLKS 279

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L+ +E + +          K +I W  QIR+Y++ PY++VKDLRT  E +    VL+G+
Sbjct: 280 RLFYIEKKSKNTTC-----IKKKIEWSSQIRNYIMHPYKLVKDLRTGYETSDIESVLNGE 334

Query: 343 LDDFMKATL 351
           +D F+K  L
Sbjct: 335 IDIFLKKNL 343


>gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
 gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
          Length = 363

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 201/316 (63%), Gaps = 7/316 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE--IQDRLCDNLILLELALEED 80
           ++ L  K+ D  LW +  +A+ ++     + + +  + +  +Q    + ++ L   L+  
Sbjct: 50  IASLEKKSADSSLWDDPSKAQEILVSLTEVKDRVKLLNDFKLQVEEAETIVKLTEELDSI 109

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  +L+E S  ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLLRM
Sbjct: 110 DTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRM 169

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG++ GE+G HR+VR SP+++  
Sbjct: 170 YVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYAYGYISGEKGTHRIVRQSPFNAKG 229

Query: 201 RRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R TSF+ + V P++ ++S+ ++I E D  I   RA G GGQ+VN  ++AVR+ HIPTG+
Sbjct: 230 LRQTSFAGVEVMPLLPEESMAVDIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGI 289

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVL 317
            V+C +ERSQ  NK +A N L+AKL  + E Q+  EI  I G+  K E  WG+QIR+YV 
Sbjct: 290 AVRCSEERSQLANKIKALNRLKAKLLVIAEEQRASEIKQIRGDMVKAE--WGQQIRNYVF 347

Query: 318 QPYQMVKDLRTNIEKT 333
            PY++VKD+RT  E +
Sbjct: 348 HPYKLVKDVRTGCETS 363


>gi|325299167|ref|YP_004259084.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
 gi|324318720|gb|ADY36611.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
          Length = 371

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/333 (41%), Positives = 206/333 (61%), Gaps = 15/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W +  +A+  M++ + L   I    E++  L D L   ELA +  +D+     
Sbjct: 36  RTQAPGFWDDAKKAEAQMKKVKTLQGWIDGYNEVK-TLADEL---ELAFDFYKDELVSEA 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  +   + +  VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY RWAE
Sbjct: 92  EVDEAYVQAQKAVEELELKNMLRSEADQMDCVLKINSGAGGTESQDWASMLMRMYMRWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF
Sbjct: 152 SHGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLKGENGVHRLVRVSPYNAQGKRMTSF 211

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258
           +S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    
Sbjct: 212 ASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEE 271

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           ++++  + R Q KNK  A   LR+ LY+ ELQ R E     E+ K +I WG QIRSYV  
Sbjct: 272 ILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFD 331

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 332 D-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363


>gi|198274326|ref|ZP_03206858.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
 gi|198272816|gb|EDY97085.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
          Length = 371

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 204/331 (61%), Gaps = 11/331 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   I+  +E++  L D L  L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKAAEAQMKKVKALQQWITGYQEVK-TLADEL-QLSFDFYKDELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY RWAE  
Sbjct: 94  DEAYSKAISAVEELELKNMLRSEADQMDCVLKINSGAGGTESQDWASMLMRMYMRWAESN 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDDSIE+ +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ++  + R Q KNK  A   LR+ LY+ ELQ R E     E+ K +I WG QIRSYV    
Sbjct: 274 IENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD- 332

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363


>gi|168702592|ref|ZP_02734869.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 342

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 193/328 (58%), Gaps = 5/328 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  +   W N  +AK ++ + +  +  +   +E+     D   + ELA  E+D +  
Sbjct: 5   LEAKQAEGDFWNNPEKAKSVIGQLKVCNALLKPYEELTAAANDIKAMAELA--EEDAAFE 62

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    LQ+ + + E  + + ++ G+ DS  A + +  GAGGT++ D+A ML R Y RWA
Sbjct: 63  SELEPALQKAETQYEAFELQIMMGGKHDSRSAIVTIKPGAGGTDACDFAEMLFRAYGRWA 122

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++  F  E  +I   +EAG+ S +  I GP AYG+++ E GVHRLVRISP+     R TS
Sbjct: 123 QRHGFSVEDEDIEPNQEAGVASVSFKIVGPYAYGYMQSEIGVHRLVRISPFGGGDTRQTS 182

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F++I V P + D IEI I ++D  + T+   G GGQHVN T S VR+ H  +G+  +C+ 
Sbjct: 183 FAAIDVLPELPDDIEIVIKDTDYEVQTFSTGGPGGQHVNKTQSGVRLIH-KSGIRAECRM 241

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQHKNKA+A  ML+ +L  +E QKR   A     +K EI +G QIRSYVLQPY +V+D
Sbjct: 242 GRSQHKNKAEALKMLQTRLEAVEEQKRMGDAVKSYDAKGEIAFGSQIRSYVLQPYTLVRD 301

Query: 326 LRTNIEKTSPS--DVLDGDLDDFMKATL 351
            R  I+  +P+  DVLDG+ D FM A L
Sbjct: 302 ERDGIDVKTPAVNDVLDGNFDQFMHAYL 329


>gi|46200154|ref|YP_005821.1| peptide chain release factor 2 [Thermus thermophilus HB27]
 gi|55980111|ref|YP_143408.1| peptide chain release factor 2 [Thermus thermophilus HB8]
 gi|218766794|pdb|3F1E|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766850|pdb|3F1G|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|46197782|gb|AAS82194.1| bacterial peptide chain release factor 2 (RF-2) [Thermus
           thermophilus HB27]
 gi|55771524|dbj|BAD69965.1| peptide chain release factor 2 [Thermus thermophilus HB8]
          Length = 378

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/344 (45%), Positives = 208/344 (60%), Gaps = 5/344 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD      RL  L  + EDP LW +   A+ + +E   L   +   + ++  L   L
Sbjct: 27  GGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLL 86

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+E    E+  ++  E  +  +  KL+  Y Q  +LL+      +A L +  GAGGTE+
Sbjct: 87  ELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTIQPGAGGTEA 142

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L  E GVHRL
Sbjct: 143 CDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHRL 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ VNTTDSAV
Sbjct: 203 VRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE           I WG 
Sbjct: 263 RVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVRPIEWGS 322

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 323 QIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 365


>gi|88192320|pdb|2B9M|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400
          Length = 365

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/350 (44%), Positives = 211/350 (60%), Gaps = 5/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + 
Sbjct: 5   RLAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L   L L+E    E+  ++  E  +  +  KL+  Y Q  +LL+      +A L +
Sbjct: 65  LESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE       
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L
Sbjct: 301 EVRPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 349


>gi|332886361|gb|EGK06605.1| peptide chain release factor 2 [Dysgonomonas mossii DSM 22836]
          Length = 318

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 182/261 (69%), Gaps = 9/261 (3%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  + +++L  E D   A L++++GAGGTE QDWA+ML RMY RW E +K+KT      
Sbjct: 52  IENLELKNMLRREEDKLGAVLKINSGAGGTEGQDWASMLFRMYQRWCEDKKYKTTITNWQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           DG+EAGIK+ATL ++G  AYG+LK E GVHRLVR+SP+++  +R TSF+S++V P+VDD+
Sbjct: 112 DGDEAGIKTATLQVEGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVVPLVDDT 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270
           I+I+I+ SD   DT+R+SGAGGQ+VN  ++ VR+ +      TG    +V++  + RSQ 
Sbjct: 172 IDIDINLSDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQF 231

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NK  A  +L+++LYELEL++R    +  E+ K +I WG QIRSYV    + VKD RTN 
Sbjct: 232 GNKDNAIRLLKSQLYELELERRSREQSKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           + ++ + V+DGDLDDF+K  L
Sbjct: 291 QTSNVNAVMDGDLDDFIKEYL 311


>gi|228469749|ref|ZP_04054715.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
 gi|228308684|gb|EEK17417.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
          Length = 328

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 129/275 (46%), Positives = 187/275 (68%), Gaps = 11/275 (4%)

Query: 86  QETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           Q+  D   R IKL VE  +  ++LS E D   A L+V+AGAGGTESQDWA+ML+RMY RW
Sbjct: 46  QDVDDAYARAIKL-VEDLELRNMLSAEEDRLGAVLKVNAGAGGTESQDWASMLVRMYQRW 104

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE+  +K       DG++AG+K+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R T
Sbjct: 105 AERSGYKVTITNWQDGDDAGVKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMT 164

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--------THIP 256
           SF+S++V P+VDDSIE+E++ +    DT+R+SGAGGQ+VN  ++ VR+        T +P
Sbjct: 165 SFASVFVVPLVDDSIEVEVNPALLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGVP 224

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             +V++  + RSQ +N+  A  +LR++LY+ EL++R    N  E++K +I WG QIRSYV
Sbjct: 225 EEIVIENTETRSQLENRENALRLLRSQLYDKELERRRAAQNEVEANKKKIEWGSQIRSYV 284

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               + VKD RT  + +  + V+DGD+D F+KA L
Sbjct: 285 FDD-RRVKDHRTGYQTSDVNGVMDGDIDAFIKAYL 318


>gi|211938843|pdb|2JL5|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938901|pdb|2JL7|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|237823553|pdb|2WH1|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823612|pdb|2WH3|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit
          Length = 351

 Score =  245 bits (626), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 210/349 (60%), Gaps = 5/349 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + +
Sbjct: 1   LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   L L+E    E+  ++  E  +  +  KL+  Y Q  +LL+      +A L + 
Sbjct: 61  ESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTIQ 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L 
Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ 
Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE        
Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L
Sbjct: 297 VEPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 344


>gi|295982099|pdb|2X9R|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982158|pdb|2X9T|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
          Length = 351

 Score =  245 bits (626), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 210/349 (60%), Gaps = 5/349 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + +
Sbjct: 1   LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   L L+E    E+  ++  E  +  +  KL+  Y Q  +LL+      +A L + 
Sbjct: 61  ESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTIQ 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L 
Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ 
Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE        
Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L
Sbjct: 297 VRPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 344


>gi|297623932|ref|YP_003705366.1| hypothetical protein Trad_1705 [Truepera radiovictrix DSM 17093]
 gi|297165112|gb|ADI14823.1| conserved hypothetical protein [Truepera radiovictrix DSM 17093]
          Length = 377

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 149/351 (42%), Positives = 204/351 (58%), Gaps = 9/351 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ QL+ L G  D      RL+ L  +  DP LW +   A+ L +E   L   +     
Sbjct: 14  EMTAQLHALRGYLDLARKEARLAELEPQLSDPKLWDDPEAARTLTQEAARLRRVLETFHR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L     L ELA   ++   L+     LQR  L+  Y+  E+L SG  D   A L +
Sbjct: 74  LEGDLEGLRELQELATTPEEQQDLEAERAALQRT-LDALYR--ETLFSGPHDDRAAILTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI--HDGEEAGIKSATLLIKGPNAYG 179
             GAGGTES DWA ML RMY R+AE++ F+ E L+    D    GI  A L+I+G  AYG
Sbjct: 131 KPGAGGTESSDWAGMLWRMYRRFAERQGFEVELLDATPSDAAPNGIDYAQLIIRGERAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVR+SP+D+  RRHTSF+S+ V P +DD++EI I   D R+D YR+SG G
Sbjct: 191 LLQVESGVHRLVRVSPFDAQGRRHTSFASVEVMPEIDDAVEITIDPKDVRVDVYRSSGPG 250

Query: 240 GQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GQ VNTTDSAVR+ +    P  +VV CQ  +SQ KN+ +A  +LR++L+E E ++R E  
Sbjct: 251 GQSVNTTDSAVRVVYKGGTPEEIVVTCQDGKSQIKNREKAMTVLRSRLFEREERRRLEEQ 310

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
                 +  I WG QIRSYVL   + VKD RT   +  P DVLDGD++  +
Sbjct: 311 MRARGEQKAIEWGSQIRSYVLD-KRYVKDHRTGEMRHDPDDVLDGDIEGLI 360


>gi|154490399|ref|ZP_02030660.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
 gi|154089010|gb|EDN88054.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
          Length = 322

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 129/262 (49%), Positives = 180/262 (68%), Gaps = 11/262 (4%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  +F ++L  EAD     L++++GAGGTESQDWA+MLLRMYTRWAE   +K       
Sbjct: 52  VESLEFRNMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+EAGIK+ATL I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDD+
Sbjct: 112 EGDEAGIKTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDT 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270
           IE++I ++    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q 
Sbjct: 172 IEVKIDQAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQP 231

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A   LR+ LY+ ELQ R EE A + E+ K +I WG QIRSYV    + VKD RTN
Sbjct: 232 KNRENAMRQLRSILYDKELQHRMEEQAKV-EAGKKKIEWGSQIRSYVFDD-RRVKDHRTN 289

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            + +  + V+DG +DDF+KA L
Sbjct: 290 FQTSDVNGVMDGKIDDFIKAYL 311


>gi|218131879|ref|ZP_03460683.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|317474512|ref|ZP_07933786.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986182|gb|EEC52521.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|316909193|gb|EFV30873.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
          Length = 372

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 136/332 (40%), Positives = 207/332 (62%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   IS   E+  R+  + + L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV--RILADELQLAFDFYKDELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 94  DEAYAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKATIANLQEGDEAGIKACTIEIAGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319
           ++  + R Q KN+  A   LR+ LY+ ELQ R  E A + E+ K +I WG QIRSYV   
Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYL 363


>gi|319900327|ref|YP_004160055.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
 gi|319415358|gb|ADV42469.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
          Length = 371

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 207/332 (62%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W++   A+  M++ + L   IS    ++  L D  + L     +D+    +E 
Sbjct: 36  RTQAPGFWEDQKAAEAQMKKVKGLQQWISGYNGVK-TLTDE-VQLAFDFYKDELVSEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD  D  L++++GAGGTESQDWANML+RMY R+AE  
Sbjct: 94  DEAFAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWANMLMRMYLRYAETH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKAAIANLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE++I  ++   DT+R+SGAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVDIKVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319
           ++  + R Q KN+  A   LR+ LY+ ELQ R  E A + E+ K +I WG QIRSYV   
Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363


>gi|218259544|ref|ZP_03475251.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225027|gb|EEC97677.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
          Length = 322

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/262 (49%), Positives = 180/262 (68%), Gaps = 11/262 (4%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  +F ++L  EAD     L++++GAGGTESQDWA+MLLRMYTRWAE   +K       
Sbjct: 52  VESLEFRNMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+EAGIK+ATL I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDD+
Sbjct: 112 EGDEAGIKTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDT 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270
           IE++I ++    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q 
Sbjct: 172 IEVKIDQAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQP 231

Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           KN+  A   LR+ LY+ ELQ R EE A + E+ K +I WG QIRSYV    + VKD RTN
Sbjct: 232 KNRENAMRQLRSILYDKELQHRMEEQAKV-EAGKKKIEWGSQIRSYVFDD-RRVKDHRTN 289

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            + +  + V+DG +DDF+KA L
Sbjct: 290 YQTSDVNGVMDGKIDDFIKAYL 311


>gi|188995108|ref|YP_001929360.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594788|dbj|BAG33763.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
          Length = 319

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 123/261 (47%), Positives = 182/261 (69%), Gaps = 9/261 (3%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +E  + +++L  E D   A L+V+AGAGGTESQDWA+ML+RMY RWA+K+ ++       
Sbjct: 52  IEEVELKNMLRSEEDHFGAVLKVNAGAGGTESQDWASMLVRMYQRWADKQGYQVTITNWQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           DG+EAGIK+ T+ ++G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDS
Sbjct: 112 DGDEAGIKTVTMQVEGNLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDS 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270
           IEIEI+ +    DT+R+ GAGGQ+VN  ++ VR+ +      TG    +V++  + R+Q+
Sbjct: 172 IEIEINAAGISWDTFRSGGAGGQNVNKVETGVRLHYKYKDPETGEDKEIVIENTESRTQY 231

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+  A  +LR++LYE+ELQ+R       E+ K +I WG QIRSYV    + VKD RTN 
Sbjct: 232 DNRENAMRLLRSQLYEMELQRRRAAEAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           + ++ + V+DGD+D+F+KA L
Sbjct: 291 QTSNVNAVMDGDIDEFIKAYL 311


>gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
 gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 211/337 (62%), Gaps = 10/337 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILLELAL 77
           R   L+ ++    LW++  +A+++M E    R+ LD A +F + + D     L L E+  
Sbjct: 76  RFESLDERSSAGDLWEDANKARVVMAELAGVREELDAARAFEEHVSDAKT-ALELAEVGE 134

Query: 78  EEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            +++ S +L E   +++ +   +E  +   LL G+ D+  A ++++AGAGG ++QDW  M
Sbjct: 135 SDNEMSEMLCEAMASVEALDEALEQWELRRLLGGKYDALGAVVQIYAGAGGLDAQDWTEM 194

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY  W EKR +     E  +GE  G+K+ATL + G +AYG+L  E+G HRLVR SP+
Sbjct: 195 LERMYIGWCEKRGYGVRVTERQEGEGGGLKTATLEVDGRHAYGYLSSEKGTHRLVRQSPF 254

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           + ++ R TSF+++ V P++ D  E+++ E D  I T R+SGAGGQ+VN  ++AVRI H+P
Sbjct: 255 NKDAARQTSFAAVDVIPLLQDEDEVKVPEGDLEITTMRSSGAGGQNVNKLETAVRIKHVP 314

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRS 314
           TG+ V+ ++ R+Q  N+  A   ++AKL  L  + R  +IA + G+  K E  WG+QIR+
Sbjct: 315 TGISVKAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAE--WGQQIRN 372

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVL PY+MVKD+RT +E +  + VL+G LD++M   L
Sbjct: 373 YVLHPYKMVKDVRTGVETSDVTRVLNGGLDEYMNGYL 409


>gi|258648792|ref|ZP_05736261.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
 gi|260851127|gb|EEX70996.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 134/333 (40%), Positives = 207/333 (62%), Gaps = 15/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W +   A+  M++ + ++  +    ++    C  +  LE A E  +D+    +
Sbjct: 36  RTQAPDFWDDPKRAEEQMKKVKGIEKWVIDYNDV----CLLVGELETAFEFYKDELVTEE 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   + Q+    +E  +  ++L GE DS DA L++++GAGGTESQDWA+ML+RMY R+AE
Sbjct: 92  EVDADYQKAIDAIEALELRNMLRGEEDSMDAVLKINSGAGGTESQDWASMLMRMYLRYAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +KT    + DG+EAGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF
Sbjct: 152 AQGYKTRISNLQDGDEAGIKTVTIEIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSF 211

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG---- 258
           +S++V P+VDD+IE+ +  S    D +R+ GAGGQ+VN  ++ VR+    T   TG    
Sbjct: 212 ASVFVTPLVDDNIEVYVDPSKISWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGETEE 271

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           ++++  + R Q +N+  A  +LR++LY+  LQKR       E+ K +I WG QIRSYV  
Sbjct: 272 ILIENTESRKQLENRENAMRLLRSQLYDRALQKRRAAQAKIEAGKKKIEWGSQIRSYVFD 331

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RTN + +  + V+DG LD F+KA L
Sbjct: 332 D-RRVKDHRTNFQTSDVNGVMDGKLDGFIKAYL 363


>gi|160891387|ref|ZP_02072390.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270295480|ref|ZP_06201681.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478476|ref|ZP_07937636.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
 gi|156858794|gb|EDO52225.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270274727|gb|EFA20588.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905365|gb|EFV27159.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
          Length = 371

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 205/332 (61%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   IS   E++  L D  + L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEVK-TLTDE-VQLAFDFYKDELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            D   +    VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 94  DDAYAKAITAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKATIANLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE+ I  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVNIEPARMSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319
           ++  + R Q KN+  A  +LR+ LY+ ELQ R  E A + E+ K +I WG QIRSYV   
Sbjct: 274 IENTETRDQPKNRENALRLLRSMLYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363


>gi|313157406|gb|EFR56829.1| putative peptide chain release factor 2 [Alistipes sp. HGB5]
          Length = 370

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/345 (40%), Positives = 213/345 (61%), Gaps = 21/345 (6%)

Query: 21  QRLSFLNT--KTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILLE 74
           +R+  LN   KT+ P  W N  +A+  +R     +  +D+  +  K+++D     L L+ 
Sbjct: 26  KRIDLLNEEEKTQVPDFWDNPDQAREQLRRVAAIKAWVDDYDAVAKDVED-----LALMP 80

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             ++E   S  QE   +  +    +E  +  ++L  + D   A L+++AGAGGTE+ DWA
Sbjct: 81  EFVKEGVVS-EQEMDAHYAQTLERIEKLEMRNMLRRDEDKLGAILDINAGAGGTEALDWA 139

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMYTRW E   +K + L+   G+E G+KS TL  +G  AYG+LK E GVHR+VR+S
Sbjct: 140 SMLLRMYTRWGEAHGYKVKVLDYQAGDEVGVKSCTLEFEGEYAYGYLKSENGVHRMVRLS 199

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++N++R T+F+S++V P VDD+IE+ ++ SD   DT+RASGAGGQ+VN  ++AVR+ +
Sbjct: 200 PFNANNKRQTTFASVFVSPAVDDTIEVTVNPSDIEWDTFRASGAGGQNVNKVETAVRLRY 259

Query: 255 ----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
                 TG     +++  + RSQ  N+  A  +L++KLY+ EL KR       E+SK +I
Sbjct: 260 HGKDADTGEAVEFLIENMETRSQLMNRENAMRILKSKLYQRELDKRMATQQALEASKKKI 319

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            WG QIRSYV    + VKD RT ++ ++   V+DG LD+F+KA L
Sbjct: 320 EWGSQIRSYVFDD-RRVKDHRTGVQTSAVEAVMDGGLDEFIKAYL 363


>gi|329956010|ref|ZP_08296781.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
 gi|328524769|gb|EGF51823.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
          Length = 372

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 206/332 (62%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   IS   E+  ++  + + L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV--KVMADELQLAFDFYKDELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 94  DEAYAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKATIANLQEGDEAGIKACTIEIAGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE+ I ++    DT+R+SGAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319
           ++  + R Q KN+  A   LR+ LY+ ELQ R  E A + E+ K +I WG QIRSYV   
Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYL 363


>gi|167764194|ref|ZP_02436321.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
 gi|167698310|gb|EDS14889.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
          Length = 372

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/332 (41%), Positives = 206/332 (62%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   IS   E++  L D L  L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEVK-VLADEL-QLAFDFYKDELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 94  DEAYAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKATISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE+ I ++    DT+R+SGAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319
           ++  + R Q KN+  A   LR+ LY+ ELQ R  E A + E+ K +I WG QIRSYV   
Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYL 363


>gi|330997843|ref|ZP_08321678.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329569731|gb|EGG51496.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 370

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 205/337 (60%), Gaps = 23/337 (6%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL------ELALEEDDC 82
           +T+ P  W +   A+  M++ + L   I   KE++  LCD L L       E+  EE+  
Sbjct: 36  RTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEVK-TLCDELELAFDFYKEEMVTEEEVD 94

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +   T D L+ ++L        ++L  E D  DA L++++GAGGTESQDWA+ML+RMY 
Sbjct: 95  GLYSRTVDALEDLELR-------NMLRQEEDPMDAVLKINSGAGGTESQDWASMLMRMYM 147

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAE   +K       DG+EAGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R
Sbjct: 148 RWAESHGYKCTISNYQDGDEAGIKTVTMQIEGEFAYGYLKSENGVHRLVRVSPYNAQGKR 207

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG 258
            TSF+S++V P+VDDSIE+ +  S    D +R+ GAGGQ+VN  ++ VR+ +      TG
Sbjct: 208 MTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQNVNKVETGVRLRYQYKDPDTG 267

Query: 259 ----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
               ++++  + R Q +N+  A  +L+++LY+  LQKR+      E+ K +I WG QIRS
Sbjct: 268 EEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKAKQAEIEAGKKKIEWGSQIRS 327

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YV    + VKD RTN + +  + V+DG LD F+K+ L
Sbjct: 328 YVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYL 363


>gi|332881782|ref|ZP_08449430.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680421|gb|EGJ53370.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 370

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 205/337 (60%), Gaps = 23/337 (6%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL------ELALEEDDC 82
           +T+ P  W +   A+  M++ + L   I   KE++  LCD L L       E+  EE+  
Sbjct: 36  RTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEVK-TLCDELELAFDFYKEEMVTEEEVD 94

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +   T D L+ ++L        ++L  E D  DA L++++GAGGTESQDWA+ML+RMY 
Sbjct: 95  GLYGRTVDALEDLELR-------NMLRQEEDPMDAVLKINSGAGGTESQDWASMLMRMYM 147

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAE   +K       DG+EAGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R
Sbjct: 148 RWAESHGYKCTVSNYQDGDEAGIKTVTMQIEGEFAYGYLKSENGVHRLVRVSPYNAQGKR 207

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG 258
            TSF+S++V P+VDDSIE+ +  S    D +R+ GAGGQ+VN  ++ VR+ +      TG
Sbjct: 208 MTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQNVNKVETGVRLRYQYKDPDTG 267

Query: 259 ----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
               ++++  + R Q +N+  A  +L+++LY+  LQKR+      E+ K +I WG QIRS
Sbjct: 268 EEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKAKQAEIEAGKKKIEWGSQIRS 327

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YV    + VKD RTN + +  + V+DG LD F+K+ L
Sbjct: 328 YVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYL 363


>gi|229496829|ref|ZP_04390538.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316240|gb|EEN82164.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
          Length = 318

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 128/275 (46%), Positives = 185/275 (67%), Gaps = 10/275 (3%)

Query: 86  QETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           +E  D   +I L  +E  +  ++L  E D   A L+V+AGAGGTESQDWA+ML+R+Y RW
Sbjct: 38  EEEVDQAYQIALSLIENVELRNMLRREEDRLGAVLKVNAGAGGTESQDWASMLVRLYQRW 97

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE   +K       DG+EAGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R T
Sbjct: 98  AENHDYKVTITNWQDGDEAGIKTVTMQIEGDLAYGFLKSENGVHRLVRVSPYNAQGKRMT 157

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG-- 258
           SF+S++V P+VDDSIEI ++ ++   DT+R+SGAGGQ+VN  ++ VR+ +      TG  
Sbjct: 158 SFASVFVVPLVDDSIEIAVNPANLSWDTFRSSGAGGQNVNKVETGVRLHYQFKDPDTGEE 217

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             +V++  + RSQ  N+  A  +LR++LY++EL+KR       E+ K +I WG QIRSYV
Sbjct: 218 REIVIENTESRSQLDNRENALRLLRSQLYDIELEKRRAAQAEVEAGKKKIEWGSQIRSYV 277

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               + VKD RTN + ++ + V+DGD+DDF+KA L
Sbjct: 278 FDD-RRVKDHRTNFQTSNVNAVMDGDIDDFIKAYL 311


>gi|189459974|ref|ZP_03008759.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
 gi|189433347|gb|EDV02332.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
          Length = 371

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 205/333 (61%), Gaps = 15/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W +  +A+  M++ + L   I     ++  L D L   ELA +  +D+    +
Sbjct: 36  RTQAPGFWDDAKKAEAQMKKVKSLQGWIEGYNAVK-TLTDEL---ELAFDFYKDELVTEE 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  +   +    +E  + +++L  EAD  D  L++++GAGGTESQDW++ML+RMY RWAE
Sbjct: 92  EVDEAYAKSLQALEELELKNMLRSEADQMDCVLKINSGAGGTESQDWSSMLMRMYMRWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF
Sbjct: 152 SNGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLKGENGVHRLVRVSPYNAQGKRMTSF 211

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258
           +S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    
Sbjct: 212 ASVFVTPLVDDSIEVVVEPARLSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEE 271

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           ++++  + R Q KNK  A   LR+ LY+ ELQ R E     E+ K +I WG QIRSYV  
Sbjct: 272 ILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFD 331

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 332 D-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363


>gi|330840796|ref|XP_003292395.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
 gi|325077351|gb|EGC31069.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
          Length = 330

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 192/320 (60%), Gaps = 17/320 (5%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++E   L   I     + +   D   ++E++ +E D  +L E+ + L  +       +  
Sbjct: 18  IKEYNSLKAVIDEFNSLNNSFKDYQEIVEMSKKEGDQEMLNESRNLLNSLYSICTDLEIN 77

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            L+ GE D N  ++EVHAG GG +S DW  ++ +MY  WAE++ F+   +E   GE  G+
Sbjct: 78  VLMIGEEDDNSCFIEVHAGVGGADSMDWTEIIHKMYINWAERKGFQVSIIESIPGE-FGL 136

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           + ATL I G NAYGWL+ E G+H+L+RISP+  + +RHTSF+S+ VYP  D+SI +++  
Sbjct: 137 RRATLKIDGKNAYGWLRTEMGIHKLIRISPFSPDFKRHTSFASVVVYPSSDNSINVDLKP 196

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D +I+  R+SGAGGQHVNTT+SAVRI HIPT + V C  ERSQH+NKA   ++L+ K++
Sbjct: 197 NDLKIEFTRSSGAGGQHVNTTESAVRIVHIPTNISVFCSSERSQHQNKAIGLDLLKTKIF 256

Query: 286 --------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
                   E E + R+E+   G +S      G  +RSY + P + VKD RT  E +  S 
Sbjct: 257 RHYLSIKNEKEKKFRDELGTNGFAS------GNIVRSYTMHPQERVKDQRTGFETSQLSK 310

Query: 338 VLDGD--LDDFMKATLAIKK 355
           +L+GD  LD  +K  L++ +
Sbjct: 311 ILEGDEELDKMIKLALSVSQ 330


>gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
 gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
          Length = 420

 Score =  241 bits (616), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 116/240 (48%), Positives = 159/240 (66%), Gaps = 1/240 (0%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  DA + +  G GG E+QDW  MLL+MY ++ E++ ++    +    E  GI  AT  +
Sbjct: 173 DQGDAIVTIKPGQGGLEAQDWCAMLLKMYCKYCERKSWRVTINDCPQAEVIGIDRATFTV 232

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E GVHRLVRISP D+  RR T+F+ + V PV+ +  ++EI+  D R+D 
Sbjct: 233 HGVRAYGMLKAEAGVHRLVRISPTDAKHRRQTTFAGVEVIPVLPEETDVEINPQDVRVDV 292

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ASG GGQ VNTTDSAVR+TH+P+G+VV CQ ERSQ +NKA A  +L+A+LYEL+ Q+R
Sbjct: 293 FHASGPGGQGVNTTDSAVRLTHMPSGIVVSCQNERSQLQNKAAAMEILKARLYELQRQQR 352

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATL 351
               N  +   T I WG QIR+Y+L P+Q+VKD RT +E  +   VL +G+LD F+ A L
Sbjct: 353 ATQLNDLKGLTTTISWGNQIRNYILYPFQLVKDTRTQVETGNVDAVLQEGNLDPFIIAYL 412


>gi|291515566|emb|CBK64776.1| bacterial peptide chain release factor 2 (bRF-2) [Alistipes shahii
           WAL 8301]
          Length = 370

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 209/332 (62%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           KT++P+ W N  +A+  +R+   +   +     I+ +  ++L L+   ++E   S  +E 
Sbjct: 36  KTQEPNFWDNPDKAREQLRKVAGIKAWVEDYDAIR-KDAEDLQLMPDFVKEGVVS--EEE 92

Query: 89  SDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            D      LE +E  +  ++L  + D   A L+++AGAGGTE+ DWA+ML+RMYTRW E 
Sbjct: 93  MDAHYAATLEKIEKLEMRNMLRRDEDKLGAILDINAGAGGTEALDWASMLMRMYTRWGEA 152

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             +K + L+   G+E G+KS TL  +G  AYG+LK E GVHR+VR+SP+++N++R T+F+
Sbjct: 153 HGYKVKVLDFQAGDEVGVKSCTLEFEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFA 212

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S++V P VDD+IEI ++ +D   DT+R+SGAGGQ+VN  ++AVR+ +      TG     
Sbjct: 213 SVFVSPAVDDTIEITVNAADIEWDTFRSSGAGGQNVNKVETAVRLRYHAKDPDTGEAIEY 272

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + RSQ  N+  A  +LR+KLY+ EL KR       E+SK +I WG QIRSYV   
Sbjct: 273 LIENMETRSQLMNRENAMRILRSKLYQRELDKRMATQQALEASKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RT ++ ++   V+DGDLD F+KA L
Sbjct: 333 -RRVKDHRTGVQTSAVESVMDGDLDAFIKAYL 363


>gi|224536533|ref|ZP_03677072.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521789|gb|EEF90894.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 371

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 205/331 (61%), Gaps = 11/331 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   I+   EI+  L D L  L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKTAEAQMKKVKGLQQWIAGYNEIK-TLSDEL-QLAFDFYKDELVTEEEI 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +  + ++  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 94  DEAYAKASVAIDELELKNMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETN 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ++  + R Q KN+  A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    
Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD- 332

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363


>gi|282880596|ref|ZP_06289302.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
 gi|281305491|gb|EFA97545.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
          Length = 374

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/334 (40%), Positives = 211/334 (63%), Gaps = 16/334 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W++   A+  M + + ++  +   ++++ ++ D L   +LA E   DD    +
Sbjct: 36  RTQAPDFWEDPQRAQEQMIKVKGIEKWLKGYEQVR-QMADEL---QLAYEFYRDDMVTEE 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   +  +    +E  + +++L  + D  D  +++++GAGGTESQDWA ML+RMY RWAE
Sbjct: 92  ELDHDYAKAIAAIEDLELKNMLRQKEDPMDCVMKINSGAGGTESQDWAQMLMRMYMRWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
              +K    +I DGEEAGIKS T+ I+G   AYG+LK E GVHRLVR+SP+++  +R TS
Sbjct: 152 AHDYKCTVSDIQDGEEAGIKSVTMKIEGNEYAYGFLKSENGVHRLVRVSPFNAQGKRMTS 211

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---HIP-TG--- 258
           F+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+    H P TG   
Sbjct: 212 FASVFVSPLVDDTIEVFVDPACVSWDTFRSSGAGGQNVNKVESGVRLRYQYHDPDTGEEE 271

Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            ++++  + R Q KN+A+A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV 
Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVF 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + VKD RTN + T    V+DG +DDF+KA L
Sbjct: 332 DD-RRVKDHRTNFQTTDVDGVMDGKIDDFIKAYL 364


>gi|329964588|ref|ZP_08301642.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
 gi|328524988|gb|EGF52040.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
          Length = 371

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 207/332 (62%), Gaps = 13/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   IS   E++  L + L  L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEVK-TLAEEL-QLSFDFYKDELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 94  DEAYVKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETY 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319
           ++  + R Q KN+  A   LR+ LY+ ELQ R  E A + E+ K +I WG QIRSYV   
Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 -RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363


>gi|313886616|ref|ZP_07820328.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923912|gb|EFR34709.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 328

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/275 (47%), Positives = 185/275 (67%), Gaps = 11/275 (4%)

Query: 86  QETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           Q+  D   R IKL VE  +  ++LS E D   A L+++AGAGGTESQDWA+ML+RMY RW
Sbjct: 46  QDVDDAYARAIKL-VEDLELRNMLSAEEDRLGAVLKINAGAGGTESQDWASMLVRMYQRW 104

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE+  +K       DG++AGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R T
Sbjct: 105 AERSGYKVTITNWQDGDDAGIKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMT 164

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG-- 258
           SF+S++V P+VDDSIE+E++      DT+R+SGAGGQ+VN  ++ VR+    T   TG  
Sbjct: 165 SFASVFVVPLVDDSIEVEVNPGLLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGET 224

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             +V++  + RSQ  N+  A  +LR++LY+ EL++R    +  E++K +I WG QIRSYV
Sbjct: 225 EEIVIENTETRSQMDNRENALRLLRSQLYDKELERRRAAQSEVEANKKKIEWGSQIRSYV 284

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               + VKD RT  + +  + V+DGDLD F+KA L
Sbjct: 285 FDD-RRVKDHRTGYQTSDVNGVMDGDLDAFIKAYL 318


>gi|294675125|ref|YP_003575741.1| peptide chain release factor 2 [Prevotella ruminicola 23]
 gi|294472270|gb|ADE81659.1| peptide chain release factor 2 [Prevotella ruminicola 23]
          Length = 374

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 209/334 (62%), Gaps = 12/334 (3%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           + +T+ P  W++   A+  M++ + +   +   KE++  L D L  L     +D+    +
Sbjct: 34  DLRTQAPDFWEDRKRAEEQMKKVKGIKKWLDGYKEVR-TLADEL-QLAFDFFKDEMVTEE 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D   +    +E  + +++L  + D  +A L++++GAGGTE+QDWA+ML+RMY RWAE
Sbjct: 92  EVEDTYAKAIKAIEDLELKNMLRQKEDPMEAVLKINSGAGGTEAQDWASMLMRMYMRWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
              +K     + DG+EAGIKS T+ ++G + AYG+LK E GVHRLVR+SP+++  +R TS
Sbjct: 152 AHGYKVTISNLLDGDEAGIKSVTMQLEGGDYAYGYLKSENGVHRLVRVSPFNAQGKRMTS 211

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG--- 258
           F+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+    T   TG   
Sbjct: 212 FASVFVSPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVNKVESGVRLRYWYTDPDTGEEE 271

Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            ++++  + R Q KNK +A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV 
Sbjct: 272 EILIENTETRDQPKNKERAMTLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVF 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + VKD RTN + T    V+DG +DDF+KA L
Sbjct: 332 DD-RRVKDHRTNYQTTDVDGVMDGKIDDFIKAYL 364


>gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus]
          Length = 789

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/347 (38%), Positives = 205/347 (59%), Gaps = 9/347 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD       L +L   + +   W +   A+  + +   L   +  +   +    D   +
Sbjct: 107 LFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWRGWEADAETV 166

Query: 73  LELALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +EL  EE+       ++L E  + LQ ++ +++  + + LLSG+ D+    L + AGAGG
Sbjct: 167 IELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCRLTIMAGAGG 226

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY R+ ++R FK + +E   GE AGIKS  + ++G  AYG+L GE+G 
Sbjct: 227 TEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGT 286

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HRLVR SP+++ ++R TSF+ +  +P++  DD  ++ + E +  + T R+ G+GGQ+VN 
Sbjct: 287 HRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSGGSGGQNVNK 346

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKT 304
            ++ VR+ HIPTG+ V+C QERSQ  NK  A NML+ KL   ++ Q+  ++A I      
Sbjct: 347 VETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDLAEI-RGDMV 405

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E  WG+QIR+YV  PY++VKD RT  E     DV+DGDLD  ++A L
Sbjct: 406 EASWGQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDGDLDALIEAYL 452


>gi|281425018|ref|ZP_06255931.1| peptide chain release factor 2 [Prevotella oris F0302]
 gi|281400862|gb|EFB31693.1| peptide chain release factor 2 [Prevotella oris F0302]
          Length = 378

 Score =  238 bits (608), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 209/333 (62%), Gaps = 14/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  MR+ + ++  +      + +L D L  L     +D+    +E 
Sbjct: 36  RTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYNACR-QLTDEL-QLAFDFYKDEMVSEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +  +    VE  + +++L  E DS DA L++++GAGGTESQDWA ML+RMY RW+E  
Sbjct: 94  DADYAKAVKAVEDLELKNMLRQEEDSMDAVLKINSGAGGTESQDWAQMLMRMYQRWSESH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +  +  +I DG+EAGIKS T+ I+G + AYG+LK E GVHRLVR+SPY++  +R TSF+
Sbjct: 154 GYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG    +
Sbjct: 214 SVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEHEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQ 318
           +++  + R Q KN+A+A  +L+++LY+  L+KR+ E A I E+ K +I WG QIRSYV  
Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQAEQAKI-EAGKKKIEWGSQIRSYVFD 332

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RT  + +    V+DG LD F+KA L
Sbjct: 333 D-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYL 364


>gi|299142161|ref|ZP_07035294.1| peptide chain release factor 2, programmed [Prevotella oris C735]
 gi|298576250|gb|EFI48123.1| peptide chain release factor 2, programmed [Prevotella oris C735]
          Length = 378

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 209/333 (62%), Gaps = 14/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  MR+ + ++  +      + +L D L  L     +D+    +E 
Sbjct: 36  RTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYDACR-QLTDEL-QLAFDFYKDEMVSEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +  +    VE  + +++L  E DS DA L++++GAGGTESQDWA ML+RMY RW+E  
Sbjct: 94  DADYAKAVKAVEDLELKNMLRQEEDSMDAVLKINSGAGGTESQDWAQMLMRMYQRWSESH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +  +  +I DG+EAGIKS T+ I+G + AYG+LK E GVHRLVR+SPY++  +R TSF+
Sbjct: 154 GYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG    +
Sbjct: 214 SVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEHEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQ 318
           +++  + R Q KN+A+A  +L+++LY+  L+KR+ E A I E+ K +I WG QIRSYV  
Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQAEQAKI-EAGKKKIEWGSQIRSYVFD 332

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RT  + +    V+DG LD F+KA L
Sbjct: 333 D-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYL 364


>gi|167752837|ref|ZP_02424964.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
 gi|167659906|gb|EDS04036.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
          Length = 315

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 125/304 (41%), Positives = 189/304 (62%), Gaps = 17/304 (5%)

Query: 57  SFIKEIQD-RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           + +KE++D RL    +   +  E       QE  +   R    +E  +  ++L  + D  
Sbjct: 13  AVVKEVEDLRLMPEFVKEGVVTE-------QELDEQYARAMHRIEELELRNMLRRDEDRM 65

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A +++++GAGGTE+ DWA MLLRMYTRW E   +K + L+   GEE G+KS TL  +G 
Sbjct: 66  GAIMDINSGAGGTEALDWAGMLLRMYTRWGEAHGYKVKVLDYQAGEEVGVKSCTLEFEGE 125

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E GVHR+VR+SP+++N++R T+F+S++V P +DD+IEI ++ +D   DT+R+
Sbjct: 126 YAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAIDDTIEITVNPADIEWDTFRS 185

Query: 236 SGAGGQHVNTTDSAVRI--------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           SGAGGQ+VN  ++AVR+        T  P   +++  + RSQ  N+  A  +L++KLY+ 
Sbjct: 186 SGAGGQNVNKVETAVRLRYHGKDADTGEPIEYLIENMETRSQLMNRENAMRILKSKLYQR 245

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           EL KR       E++K  I WG QIRSYV    + VKD RT ++ +    V+DGDLD+F+
Sbjct: 246 ELDKRMATQQALEATKKRIEWGSQIRSYVFDD-RRVKDHRTGVQTSDVEGVMDGDLDEFI 304

Query: 348 KATL 351
           KA L
Sbjct: 305 KAYL 308


>gi|189464495|ref|ZP_03013280.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
 gi|189438285|gb|EDV07270.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
          Length = 371

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 202/331 (61%), Gaps = 11/331 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + L   I+   EI  +     + L     +D+    +E 
Sbjct: 36  RTQAPGFWDDQKAAEAQMKKVKGLQQWIAGYNEI--KTLSEELQLAFDFYKDELVTEEEI 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    ++  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 94  DEAYAKASTAIDELELKNMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETN 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 154 GYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ++  + R Q KN+  A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    
Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD- 332

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 333 RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363


>gi|253571104|ref|ZP_04848511.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
 gi|251839057|gb|EES67141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
          Length = 354

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/354 (39%), Positives = 214/354 (60%), Gaps = 21/354 (5%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKM-LMRERQHLDNAISFIKEIQDRL- 66
           GG+FD D    ++     +T+ P  W  Q   EA+M L+++ Q   +  + +K + D L 
Sbjct: 1   GGIFDIDGKKIQVEEEQLRTQAPGFWDDQKKAEAQMKLVKDLQKWIDGYNEVKTLADELE 60

Query: 67  -CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
              +    EL  E D  +   + S+ ++ ++L+       ++L  EAD     L++++GA
Sbjct: 61  LSFDFYKEELVTEGDVDAAYAKASEAVEALELK-------NMLRDEADQMACVLKINSGA 113

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE 
Sbjct: 114 GGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGEN 173

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN 
Sbjct: 174 GVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNK 233

Query: 246 TDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R     
Sbjct: 234 VESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQA 293

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +++F+KA L
Sbjct: 294 KVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIEEFIKAYL 346


>gi|300726271|ref|ZP_07059724.1| peptide chain release factor 2 [Prevotella bryantii B14]
 gi|299776468|gb|EFI73025.1| peptide chain release factor 2 [Prevotella bryantii B14]
          Length = 376

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/334 (39%), Positives = 209/334 (62%), Gaps = 16/334 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W +   A+  M++ + +   +   KE++ +  D L   +LA E  +D+    +
Sbjct: 36  RTQAPDFWDDPKYAQEQMKKVKEIQKWLDGYKEVR-QYADEL---QLAFEFYKDEMVTEE 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D+  +    +E  + +++L  E DS DA L++++GAGGTESQDWA+ML+RMY RW E
Sbjct: 92  EVDDDYAKAIKAIENLELKNMLRQEEDSMDAVLKINSGAGGTESQDWASMLMRMYMRWCE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
              +  +   + DG+EAGIKS  + I+G   AYG+LK E GVHRLVR+SPY++  +R TS
Sbjct: 152 AHGYSVKITNMQDGDEAGIKSVEMTIEGGEFAYGFLKSENGVHRLVRVSPYNAQGKRMTS 211

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG--- 258
           F+S++V P+VDD+IEI +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG   
Sbjct: 212 FASVFVTPLVDDTIEIYVDPAKVSWDTFRSGGAGGQNVNKVESGVRLRYQYEDPDTGEHE 271

Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            ++++  + R Q KN+A+A  +L+++LY+  L++++      E+ K +I WG QIRSYV 
Sbjct: 272 EILIENTETRDQPKNRAKAMLLLKSQLYDRALKRKQAEQAKVEAGKKKIEWGSQIRSYVF 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + VKD RTN + +    V+DG LD+F+K+ L
Sbjct: 332 DD-RRVKDHRTNYQTSDVDGVMDGKLDEFIKSYL 364


>gi|325190234|emb|CCA24711.1| peptide chain release factor putative [Albugo laibachii Nc14]
          Length = 372

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 120/286 (41%), Positives = 176/286 (61%), Gaps = 12/286 (4%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            W N   A  + +    +++ +  +   + +  +   L  L+  E D  +++E  + ++ 
Sbjct: 88  FWGNAANAIAISQRLSAMESQLQRVSAYRAQFLETKELYLLSEAEKDQEMMEECFETMES 147

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           I+  V+    E +LSG+ D    +LE+ AGAGGT+SQDW  ML +MY RWA+ +K+K + 
Sbjct: 148 IRKAVQTLSMELMLSGKDDRLPCFLEIQAGAGGTDSQDWVAMLSKMYERWAQHKKYKVQY 207

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++    E  G +S  L I G  AYGW+K E GVHRL+R+SPYD   RRHTSF+ + VYP+
Sbjct: 208 VDGLRTELGGFRSVCLRIDGDLAYGWIKLEAGVHRLIRLSPYDQQKRRHTSFAQVRVYPI 267

Query: 215 --VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
              + +    +S  D RIDT+RA+G GGQHVN+TDSAVRITH+P+G+VVQCQ ERSQH+N
Sbjct: 268 EAAEATTRTAVSGKDLRIDTFRATGPGGQHVNSTDSAVRITHLPSGIVVQCQSERSQHRN 327

Query: 273 KAQAWNMLRAKLYELEL-----QKREEIANIGESSKTEIGWGRQIR 313
           KAQA  +L AKL   E+      KR+    +G+++     WG Q+R
Sbjct: 328 KAQAMEVLLAKLNNQEIAEQQSAKRQYAKGLGDNA-----WGNQVR 368


>gi|317504105|ref|ZP_07962107.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
 gi|315664777|gb|EFV04442.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
          Length = 376

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 209/336 (62%), Gaps = 20/336 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +T+ P  W +   A+  M++ + ++      +  +E+ D L      L     +D+    
Sbjct: 36  RTQAPDFWDDPKRAEAQMKKVKGIEKWLKGYNACRELADELQ-----LAFDFYKDNMVTE 90

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E   +  +    VE  + +++L  E D+ DA L++++GAGGTESQDWA ML+RMY RW+
Sbjct: 91  EEVDTDYAKAVKAVEDLELKNMLRQEEDAMDAVLKINSGAGGTESQDWAQMLMRMYQRWS 150

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           E   +  +  +I DG+EAGIKS T+ I+G + AYG+LK E GVHRLVR+SPY++  +R T
Sbjct: 151 ESHGYNVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMT 210

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG-- 258
           SF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG  
Sbjct: 211 SFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQ 270

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSY 315
             ++++  + R Q KN+A+A  +L+++LY+  L+K++ E A I E+ K +I WG QIRSY
Sbjct: 271 EEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKKQAEQAKI-EAGKKKIEWGSQIRSY 329

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V    + VKD RT  + +    V+DG LD F+KA L
Sbjct: 330 VFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYL 364


>gi|281421022|ref|ZP_06252021.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
 gi|281404940|gb|EFB35620.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
          Length = 375

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 128/332 (38%), Positives = 206/332 (62%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W++   A+  M++ + +   +   K +  RL  + + L     +D+    +E 
Sbjct: 36  RTQAPDFWEDPKYAQEQMKKVKGIQKWLDGYKTV--RLYADELQLAFDFYKDEMVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +  +    +E  + +++L  + D  D  L++++GAGGTESQDWA ML+RMY RW+E  
Sbjct: 94  DADYAKAIKAIEDLELKNMLRQKEDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWSEAH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +K    ++ +G+EAGIKS T+ I+G   AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 154 GYKVTITDMQEGDEAGIKSVTMTIEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259
           S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+    T   TG    +
Sbjct: 214 SVFVTPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVNKVESGVRLRYWYTDPDTGEEEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q KN+A+A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV   
Sbjct: 274 LIENTETRDQPKNRAKALLLLKSQLYDRAMKKRLEAKAKIEAGKKKIEWGSQIRSYVFDD 333

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + +    V+DG +DDF+KA L
Sbjct: 334 -RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364


>gi|282878031|ref|ZP_06286839.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
 gi|281299866|gb|EFA92227.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
          Length = 374

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 209/334 (62%), Gaps = 16/334 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W++   A+  M + + ++  +   ++++ +L D L   ELA +   D+     
Sbjct: 36  RTQAPDFWEDPKRAQEQMIKVKGIEKWLVGYQQVR-QLADEL---ELAFDFYRDEMITED 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   +  +    +E+ + +++L    D  D  +++++GAGGTESQDWA ML+RMY RWAE
Sbjct: 92  ELDADYAKAVAAIEHLEMKNMLRQTEDPMDCVMKINSGAGGTESQDWAQMLMRMYMRWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
              +K    +I DG+EAGIKS T+ I+G   AYG+LK E GVHRLVR+SP+++  +R TS
Sbjct: 152 AHDYKCTISDIQDGDEAGIKSVTMKIEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTS 211

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG--- 258
           F+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG   
Sbjct: 212 FASVFVSPLVDDTIEVFVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEEE 271

Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            ++++  + R Q KN+A+A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV 
Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVF 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + VKD RTN + T    V+DG LD+F+KA L
Sbjct: 332 DD-RRVKDHRTNYQTTDVDAVMDGKLDEFIKAYL 364


>gi|313147825|ref|ZP_07810018.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
 gi|313136592|gb|EFR53952.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
          Length = 337

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 203/333 (60%), Gaps = 15/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W +  +A+  M+  + L   I    E++  L D L   ELA +  +D+    Q
Sbjct: 2   RTQAPGFWDDQKKAEAQMKLVKGLQKWIDGYNEVK-TLADEL---ELAFDFYKDELVTEQ 57

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  +   +    VE  + +++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE
Sbjct: 58  EVDEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAE 117

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF
Sbjct: 118 TNGYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSF 177

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258
           +S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    
Sbjct: 178 ASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEE 237

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           ++++  + R Q KN+  A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV  
Sbjct: 238 ILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFD 297

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RTN + +  + V+DG ++ F+KA L
Sbjct: 298 D-RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYL 329


>gi|307128661|ref|YP_003880691.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
 gi|306483123|gb|ADM89993.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
          Length = 337

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 108/261 (41%), Positives = 177/261 (67%), Gaps = 3/261 (1%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  + L +IK  +   + + + + +    +A +++  GAGGTES DW +ML RMYT WA
Sbjct: 65  RELINKLNKIKNFINQIESQIIFTKKEYKLNAIIQITPGAGGTESCDWVSMLYRMYTMWA 124

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK  +  + L    G+  G+K     ++G + +G+LKGE GVHRLVRISP+D NS+RHTS
Sbjct: 125 EKNNYSIKELYNLQGDVGGLKYILFEVQGFSPFGFLKGENGVHRLVRISPFD-NSKRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+++YP+++D I+I+I+ SD +  T+R+ G+GGQ+VN  ++ VR+ H PT ++++  +
Sbjct: 184 FASVYIYPLINDDIKIKINNSDIKWSTFRSGGSGGQNVNKVETGVRLHHKPTNIIIENTE 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQ KNK +A  +L+++LY +E Q +  I    +  K E  WG QIR+Y++ PY++VKD
Sbjct: 244 TRSQIKNKTKALKLLKSRLYYIEKQNKNIIRKKNKLKKIE--WGSQIRNYIMHPYKLVKD 301

Query: 326 LRTNIEKTSPSDVLDGDLDDF 346
           L+T  E ++ + V+DG+L++F
Sbjct: 302 LKTGYETSNINSVMDGNLNNF 322


>gi|323343897|ref|ZP_08084124.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
 gi|323095716|gb|EFZ38290.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
          Length = 373

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/354 (38%), Positives = 212/354 (59%), Gaps = 14/354 (3%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + L    D D  +        +T+ P  W++   A+  M+  + ++  I   KE+  R  
Sbjct: 15  DALHRYLDIDRKMVEFEEEQLRTQAPDFWEDPQRAQEQMKLVKGIEKWIKGYKEV--RQY 72

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            + + L      DD    +E   +  +    +E  + +++L  + D  +  L++++GAGG
Sbjct: 73  ADELQLAFDFYHDDMVSEEEVDADYAKAIKAIEDLELKNMLRQQEDPMECVLKINSGAGG 132

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQG 186
           TESQDWA ML+RMY RWAE   +K     + +G+EAGIKS T+ I+G   AYG+LK E G
Sbjct: 133 TESQDWAQMLMRMYMRWAEAHGYKVSISNLQEGDEAGIKSVTMEIEGGEYAYGFLKSENG 192

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+VN  
Sbjct: 193 VHRLVRVSPFNAQGKRMTSFASVFVSPLVDDSIEVFVDPARVSWDTFRSGGAGGQNVNKV 252

Query: 247 DSAVRITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIAN 297
           +S VR+ ++     TG    ++++  + R Q KN+A+A  +L+++LY+  ++KR EE A 
Sbjct: 253 ESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEEQAK 312

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           I E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L
Sbjct: 313 I-EAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364


>gi|333029659|ref|ZP_08457720.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
 gi|332740256|gb|EGJ70738.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
          Length = 370

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/290 (44%), Positives = 190/290 (65%), Gaps = 13/290 (4%)

Query: 73  LELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           LELA +  +D+    +E      +  + +E  + +++L  EAD     L++++GAGGTES
Sbjct: 76  LELAFDFYKDELVSEEEVDAAYNKALVCIENLELKNMLRQEADQLGCILKINSGAGGTES 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+R+Y RWAE   +K     + +G+EAGIK+ T+ ++G  AYG+LKGE GVHRL
Sbjct: 136 QDWASMLMRLYLRWAEDHNYKATLSNLQEGDEAGIKTCTIQVEGEYAYGYLKGENGVHRL 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR+SPY++  +R TSF+SI+V P+VD+SIE+ I  S    D +R+ GAGGQ+VN  ++ V
Sbjct: 196 VRVSPYNAQGKRMTSFASIFVTPLVDESIEVTIDPSAITWDLFRSGGAGGQNVNKVETGV 255

Query: 251 RITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG    ++V+  + RSQ  N+  A  +LR+ LYE ELQKR  E+  I E 
Sbjct: 256 RLRYQYKDPDTGQEEEILVENTESRSQLDNRENAMRLLRSILYEKELQKRLAELRKI-ED 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SK +I WG QIRSYV    + VKD RTN + +  + V+DGD+D+F+KA L
Sbjct: 315 SKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGDIDEFIKAYL 363


>gi|329942484|ref|ZP_08291294.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
 gi|328815394|gb|EGF85382.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
          Length = 272

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 117/219 (53%), Positives = 159/219 (72%), Gaps = 3/219 (1%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + LLSGE D N  +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AG
Sbjct: 40  QRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAG 99

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK  T+   G  AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I 
Sbjct: 100 IKHVTVKFSGDYAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIR 159

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++
Sbjct: 160 PNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARM 219

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Y+  LQ+R E   I   +K ++     +R +V+  + ++
Sbjct: 220 YQQILQERLEKQLIDRKNKKKL---LGVRKFVIMFFSLI 255


>gi|160885362|ref|ZP_02066365.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|237716574|ref|ZP_04547055.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|237720319|ref|ZP_04550800.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|260172304|ref|ZP_05758716.1| peptide chain release factor RF-2 [Bacteroides sp. D2]
 gi|262405351|ref|ZP_06081901.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|293370547|ref|ZP_06617099.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|294644599|ref|ZP_06722352.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294810341|ref|ZP_06769002.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|315920609|ref|ZP_07916849.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108984|gb|EDO10729.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|229442557|gb|EEO48348.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|229450070|gb|EEO55861.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|262356226|gb|EEZ05316.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292634281|gb|EFF52818.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|292640036|gb|EFF58301.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294442449|gb|EFG11255.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|295086344|emb|CBK67867.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           xylanisolvens XB1A]
 gi|313694484|gb|EFS31319.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 319

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/286 (44%), Positives = 185/286 (64%), Gaps = 16/286 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EED  +   + S+ ++ ++L+       ++L  EAD  D  L++++GAGGTESQDW
Sbjct: 34  ELVTEEDVDAAYAKASEAVEALELK-------NMLRDEADQMDCVLKINSGAGGTESQDW 86

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+
Sbjct: 87  ASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRV 146

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY++  +R TSF+S++V P+VDDSIE+ I  ++   DT+R+ GAGGQ+VN  +S VR+ 
Sbjct: 147 SPYNAQGKRMTSFASVFVTPLVDDSIEVNILPANISWDTFRSGGAGGQNVNKVESGVRLR 206

Query: 254 H----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R       E+ K +
Sbjct: 207 YQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKK 266

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 267 IEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 311


>gi|153809227|ref|ZP_01961895.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
 gi|149128203|gb|EDM19423.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
          Length = 319

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/287 (44%), Positives = 187/287 (65%), Gaps = 18/287 (6%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL  EED  +   + S+ ++ ++L+       ++L  EAD  D  L++++GAGGTESQDW
Sbjct: 34  ELVTEEDVDAAYAKASEAVEALELK-------NMLRDEADQMDCVLKINSGAGGTESQDW 86

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+
Sbjct: 87  ASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRV 146

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S VR+ 
Sbjct: 147 SPYNAQGKRMTSFASVFVTPLVDDSIEVNIETARISWDTFRSGGAGGQNVNKVESGVRLR 206

Query: 254 H----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKT 304
           +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R  E A + E+ K 
Sbjct: 207 YQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKM 265

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L
Sbjct: 266 KIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 311


>gi|255692994|ref|ZP_05416669.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
 gi|260621306|gb|EEX44177.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
          Length = 319

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 121/261 (46%), Positives = 174/261 (66%), Gaps = 9/261 (3%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  + +++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE   +K     + 
Sbjct: 52  VEALELKNMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDS
Sbjct: 112 EGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDS 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270
           IE+ I  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q 
Sbjct: 172 IEVNIETARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQP 231

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN 
Sbjct: 232 KNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           + +  + V+DG ++DF+KA L
Sbjct: 291 QTSDVNGVMDGKIEDFIKAYL 311


>gi|260593398|ref|ZP_05858856.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
 gi|260534674|gb|EEX17291.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
          Length = 372

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 205/333 (61%), Gaps = 14/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + ++  I    E   R   + + L     +D+    +E 
Sbjct: 36  RTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA--RSLTDEVQLAFDFYKDNLVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                +    +E  + +++L  E D  +  +++++GAGGTESQDWA+ML+RMY RW E  
Sbjct: 94  DTAYNKALKAIEDLELKNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +K    +I +G+EAGIKS T+  +G   AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 154 GYKVTISDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG    +
Sbjct: 214 SVFVSPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQ 318
           +++  + R Q KN+A+A  +L+++LY+  ++KR EE A I E+ K +I WG QIRSYV  
Sbjct: 274 LIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQIRSYVFD 332

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RTN + +    V+DG +DDF+KA L
Sbjct: 333 D-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364


>gi|167842465|gb|ACA03160.1| RF2 [Dictyostelium fasciculatum]
 gi|328868131|gb|EGG16511.1| class I peptide chain release factor [Dictyostelium fasciculatum]
          Length = 425

 Score =  232 bits (591), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 128/316 (40%), Positives = 194/316 (61%), Gaps = 7/316 (2%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L++E  H+   +  I ++  +  D L L+++A    D  ++QE     +++  +    +F
Sbjct: 109 LLKEYNHIRVQVDQIDQLPVQFKDYLELVKMAKTAGDREMMQEAQSTTEQLMSQCNELEF 168

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           +SL+S + D++ AY+E+HAGAGGT+S DW  ML  MY +WA +R F  + ++   G+  G
Sbjct: 169 KSLMSNDMDNDSAYMEIHAGAGGTDSMDWTQMLSSMYIKWASRRGFDAQIIDESHGDICG 228

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIE 222
            K   L I GP AYGW + E GVH+L+R+SP+++N +RHTSF+S++VYP    D+ + ++
Sbjct: 229 YKKVILKISGPYAYGWTRTENGVHKLIRMSPFNTNGKRHTSFASVFVYPSSDADEKVAVD 288

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +   D  I+T R+SGAGGQH N T+SAVRITH P+G+ V   QERSQHKNK  A ++L++
Sbjct: 289 LVSRDLVIETMRSSGAGGQHTNKTESAVRITHTPSGLSVNISQERSQHKNKQIAMDLLKS 348

Query: 283 KLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           KL  LEL+KR+E      S +  I   G G   R Y   P   +KD RT  E ++  + L
Sbjct: 349 KLLSLELRKRDEQEKNLRSEQMGINGFGSGSINRVYTQHPQTRIKDQRTGQESSNFEEFL 408

Query: 340 DG--DLDDFMKATLAI 353
            G  +LD  +K  L+I
Sbjct: 409 QGGEELDQMIKEVLSI 424


>gi|288929843|ref|ZP_06423686.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288328944|gb|EFC67532.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 372

 Score =  231 bits (590), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 128/332 (38%), Positives = 199/332 (59%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + ++  I   KE+  R   + + L      DD    +E 
Sbjct: 36  RTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV--RQAADELQLAFDFYHDDMVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            ++ ++    VE  +  ++L  + D  D  L++++GAGGTESQDWA ML+RMY RWAE  
Sbjct: 94  DEDYRKAITAVENLELMNMLRQKEDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWAESH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             +     + +G+EAGIKS T+ I+G   AYG+LK E GVHRLVR+SPY++  +R TSF+
Sbjct: 154 GHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259
           S++V P+VDD+IE+ +  S    D +R+ GAGGQ+VN  ++ VR+    T   TG    +
Sbjct: 214 SVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q +N+  A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV   
Sbjct: 274 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN +      V+DG +DDF+KA L
Sbjct: 334 -RRVKDHRTNYQTADVDGVMDGKIDDFIKAYL 364


>gi|288803779|ref|ZP_06409207.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302345945|ref|YP_003814298.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
 gi|288333766|gb|EFC72213.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302150148|gb|ADK96410.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
          Length = 371

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/334 (38%), Positives = 210/334 (62%), Gaps = 16/334 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI-QDRLCDNLILLELALEEDDCSILQE 87
           +T+ P  W +   A+  M++ + ++    ++K+  + R   + + L     +D+    +E
Sbjct: 36  RTQAPDFWDDPARAQEQMKKVKDIEK---WVKDYDKARALADEVQLAFDFYKDELVTEEE 92

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
                 ++   +E  + +++L  E D  +  +++++GAGGTESQDWA+ML+RMY RW E 
Sbjct: 93  VDTAYAKVLKVIEGLELKNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEA 152

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           + ++    +I +G+EAGIKS T+  +G   AYG+LK E GVHRLVR+SP+++  +R TSF
Sbjct: 153 QGYRVTISDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSF 212

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258
           +S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG    
Sbjct: 213 ASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEE 272

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317
           ++++  + R Q KN+A+A  +L+++LY+  ++KR EE A I E+ K +I WG QIRSYV 
Sbjct: 273 ILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQIRSYVF 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + VKD RTN + +    V+DG +DDF+KA L
Sbjct: 332 DD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364


>gi|256370731|ref|YP_003108556.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009523|gb|ACU52883.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
          Length = 360

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 109/258 (42%), Positives = 175/258 (67%), Gaps = 3/258 (1%)

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E ++ L++I+  +   + ++    + D+++A L++ AGAGGTES DW +ML RMY  WAE
Sbjct: 92  EINNLLKKIENLISKIELKNFFFEKEDASNAVLQISAGAGGTESCDWVSMLYRMYFLWAE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           K  FK + L    G+  G KS T  +KG   +G+LKGE GVHRLVRISP+D NS+RHTSF
Sbjct: 152 KNNFKIKKLNSLQGDIIGFKSITFEVKGFYPFGYLKGENGVHRLVRISPFD-NSKRHTSF 210

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+++YP++   + ++I  SD   DT+R+ GAGGQ+VN  ++ VR+ H PT ++++  + 
Sbjct: 211 ASVYIYPLIKKDLNLDIKASDITWDTFRSGGAGGQNVNKVETGVRLHHRPTNIIIENSET 270

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +NK +A  +L+++LY +E QK     +  + +K +I WG QIR+Y++ PY++VKD+
Sbjct: 271 RSQIQNKNKALKLLKSRLYYIEKQKL--FKSKMKFNKKKIEWGSQIRNYIMHPYKLVKDI 328

Query: 327 RTNIEKTSPSDVLDGDLD 344
           +T  E +    VL+G+++
Sbjct: 329 KTGYETSDIHSVLNGEIN 346


>gi|256842350|ref|ZP_05547853.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
 gi|256735957|gb|EEU49288.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
          Length = 322

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 169/257 (65%), Gaps = 9/257 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+E
Sbjct: 56  EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++
Sbjct: 116 AGIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+ 
Sbjct: 176 VEAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + + 
Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294

Query: 335 PSDVLDGDLDDFMKATL 351
            + V+DG +DDF+KA L
Sbjct: 295 VNGVMDGKIDDFIKAYL 311


>gi|255016197|ref|ZP_05288323.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_7]
          Length = 322

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 169/257 (65%), Gaps = 9/257 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+E
Sbjct: 56  EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++
Sbjct: 116 AGIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+ 
Sbjct: 176 VEAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + + 
Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294

Query: 335 PSDVLDGDLDDFMKATL 351
            + V+DG +DDF+KA L
Sbjct: 295 VNGVMDGKIDDFIKAYL 311


>gi|298377870|ref|ZP_06987820.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|301312251|ref|ZP_07218168.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
 gi|298265316|gb|EFI06979.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|300829673|gb|EFK60326.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
          Length = 322

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 170/257 (66%), Gaps = 9/257 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+E
Sbjct: 56  EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++
Sbjct: 116 AGIKTVTIDIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+ 
Sbjct: 176 VEAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + + 
Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294

Query: 335 PSDVLDGDLDDFMKATL 351
            + V+DG +DDF+KA L
Sbjct: 295 VNGVMDGKIDDFIKAYL 311


>gi|150009345|ref|YP_001304088.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262384740|ref|ZP_06077873.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
 gi|149937769|gb|ABR44466.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262293721|gb|EEY81656.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
          Length = 322

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 169/257 (65%), Gaps = 9/257 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+E
Sbjct: 56  EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIK+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++
Sbjct: 116 AGIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+ 
Sbjct: 176 VETAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + + 
Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294

Query: 335 PSDVLDGDLDDFMKATL 351
            + V+DG +DDF+KA L
Sbjct: 295 VNGVMDGKIDDFIKAYL 311


>gi|255010031|ref|ZP_05282157.1| putative peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 319

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/289 (43%), Positives = 184/289 (63%), Gaps = 11/289 (3%)

Query: 73  LELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           LELA +  +D+    QE  +   +    VE  + +++L  EAD     L++++GAGGTES
Sbjct: 24  LELAFDFYKDELVTEQEVDEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTES 83

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRL
Sbjct: 84  QDWASMLMRMYLRYAETNGYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRL 143

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S V
Sbjct: 144 VRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGV 203

Query: 251 RITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R       E+ 
Sbjct: 204 RLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAG 263

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYV    + VKD RTN + +  + V+DG ++ F+KA L
Sbjct: 264 KKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYL 311


>gi|53711665|ref|YP_097657.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60679910|ref|YP_210054.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|253564278|ref|ZP_04841735.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265765049|ref|ZP_06093324.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52214530|dbj|BAD47123.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60491344|emb|CAH06092.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|251948054|gb|EES88336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254433|gb|EEZ25867.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301161435|emb|CBW20975.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 319

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/289 (43%), Positives = 184/289 (63%), Gaps = 11/289 (3%)

Query: 73  LELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           LELA +  +D+    QE  +   +    VE  + +++L  EAD     L++++GAGGTES
Sbjct: 24  LELAFDFYKDELVTEQEVDEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTES 83

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRL
Sbjct: 84  QDWASMLMRMYLRYAETNGYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRL 143

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S V
Sbjct: 144 VRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGV 203

Query: 251 RITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R       E+ 
Sbjct: 204 RLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAG 263

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYV    + VKD RTN + +  + V+DG ++ F+KA L
Sbjct: 264 KKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYL 311


>gi|213861334|ref|ZP_03385804.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 197

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/187 (63%), Positives = 141/187 (75%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 71  DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190

Query: 252 ITHIPTG 258
           ITHIPTG
Sbjct: 191 ITHIPTG 197


>gi|66805655|ref|XP_636549.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
 gi|60464924|gb|EAL63039.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
          Length = 424

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/292 (43%), Positives = 184/292 (63%), Gaps = 11/292 (3%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L ++E++    D   L+ET   + ++       + ++L++G+ DS    LE+ AGAGG
Sbjct: 136 DYLEVVEMSKNIGDNDWLKETRSLINQLFSNCSELEVKALMNGKDDSKGCLLEIQAGAGG 195

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            +S DW  +L  MY +W  ++ +  E ++  DGE  G + A+L I G NAYGWL+ E G+
Sbjct: 196 NDSMDWTKILFEMYCKWGARKGYNVEIIDTADGE-FGYRHASLKIDGHNAYGWLRTEMGI 254

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+ S+ +RHTSF+S+ VYP+ DDSI+I I   D   +T R+SGAGGQHVN T+
Sbjct: 255 HRLIRISPFSSSGKRHTSFASVVVYPISDDSIKINIDPKDLHFETLRSSGAGGQHVNKTE 314

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRI HIPTG+ V    ERSQH+NK+    +L++KLY  EL+K+ E     +S + E+G
Sbjct: 315 SAVRIVHIPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHELKKKIEAE---KSFRDELG 371

Query: 308 ---WGRQ--IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLA 352
              W     +R+Y + P + VKD RT IE    S +LDG  +LD+ +K  L+
Sbjct: 372 KNSWASDSVVRNYSMHPQERVKDQRTGIEVLQISKILDGEEELDNMIKKALS 423


>gi|288927134|ref|ZP_06421019.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
 gi|288336096|gb|EFC74492.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
          Length = 373

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/332 (37%), Positives = 208/332 (62%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W++   A+  M++ + ++  +   KE++ +  D L L      +D  S  +  
Sbjct: 36  RTQAPDFWEDPTRAQEQMKKVKSIEKWLDGYKEVR-QYADELQLAFDFFHDDMVSEEEVD 94

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           +D  + IK  +E  + +++L  + D  +A +++++GAGGTESQDWA+ML+RMY RW E  
Sbjct: 95  ADYAKAIKA-IEALELKNMLRQKEDPMEAVIKINSGAGGTESQDWASMLMRMYMRWCEAH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            ++     + +G+EAGIKS T+ ++G   AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 154 GYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S++V P+VDD+IE+ +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    +
Sbjct: 214 SVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNVNKVESGVRLRYWYQDPDTGEEEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q KN+A+A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV   
Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN +      V+DG +D+F+KA L
Sbjct: 334 -RRVKDHRTNYQTADVDGVMDGKIDEFIKAYL 364


>gi|315607246|ref|ZP_07882247.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
 gi|315251063|gb|EFU31051.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
          Length = 373

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 126/332 (37%), Positives = 208/332 (62%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W++   A+  M++ + ++  +   KE++ +  D L L      +D  S  +  
Sbjct: 36  RTQAPDFWEDPARAQEQMKKVKSIEKWLDGYKEVR-QYADELQLAFDFFHDDMVSEEEVD 94

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           +D  + IK  +E  + +++L  + D  +A +++++GAGGTESQDWA+ML+RMY RW E  
Sbjct: 95  ADYAKAIKA-IEALELKNMLRQKEDPMEAVIKINSGAGGTESQDWASMLMRMYMRWCEAH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            ++     + +G+EAGIKS T+ ++G   AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 154 GYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S++V P+VDD+IE+ +  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    +
Sbjct: 214 SVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNVNKVESGVRLRYWYQDPDTGEEEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q KN+A+A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV   
Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN +      V+DG +D+F+KA L
Sbjct: 334 -RRVKDHRTNYQTADVDGVMDGKIDEFIKAYL 364


>gi|260911088|ref|ZP_05917720.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634786|gb|EEX52844.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 394

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 126/332 (37%), Positives = 199/332 (59%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + ++  I   KE+  R   + + L      D+    +E 
Sbjct: 58  RTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV--RQATDELQLAFDFYHDEMVTEEEV 115

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            ++ ++    +E  +  ++L  + D  D  L++++GAGGTESQDWA ML+RMY RWAE  
Sbjct: 116 DEDYRKAITAIENLELMNMLRQKEDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWAEAH 175

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             +     + +G+EAGIKS T+ I+G   AYG+LK E GVHRLVR+SPY++  +R TSF+
Sbjct: 176 GHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 235

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259
           S++V P+VDD+IE+ +  S    D +R+ GAGGQ+VN  ++ VR+    T   TG    +
Sbjct: 236 SVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEI 295

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q +N+  A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV   
Sbjct: 296 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 355

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN +      V+DG +DDF+KA L
Sbjct: 356 -RRVKDHRTNYQTADVDGVMDGKIDDFIKAYL 386


>gi|307566238|ref|ZP_07628684.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
 gi|307345042|gb|EFN90433.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
          Length = 374

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 203/334 (60%), Gaps = 16/334 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W++   A+  M++ + ++  +       D+       L+LA +  +D      
Sbjct: 36  RTQAPDFWESPDYARQQMKKVKEIERWVKGY----DKAKAQAEELQLAFDFYKDKLVTED 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E      ++   +E  + +++L  E D  +  +++++GAGGTESQDWA ML+RMY RW E
Sbjct: 92  EVDTMYNKVVSTIEDLELKNMLRQEEDPMECVMKINSGAGGTESQDWAEMLMRMYMRWGE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
              +K    +I  G+EAGIKS T+  + G  AYG+LK E GVHRLVR+SP+++  +R TS
Sbjct: 152 AHGYKVTISDILSGDEAGIKSVTMKFESGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTS 211

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG--- 258
           F+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG   
Sbjct: 212 FASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEKE 271

Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            ++++  + R Q KN+A+A  +L+++LY  E++KR E     E++K +I WG QIRSYV 
Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYNREMKKRMEAQAKVEAAKKKIEWGSQIRSYVF 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + VKD RTN + +    V++G +DDF+KA L
Sbjct: 332 DD-RRVKDHRTNYQTSDVEGVMNGKIDDFIKAYL 364


>gi|303236882|ref|ZP_07323461.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
 gi|302483050|gb|EFL46066.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
          Length = 371

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 210/334 (62%), Gaps = 16/334 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86
           +T+ P  W++   A+  M++ + ++  I   + ++ +  +    L+LA +  +D+    +
Sbjct: 36  RTQAPDFWEDAERAQEQMKKVKGIEKWIKGYENVKTQADE----LQLAFDFYKDELVTEE 91

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +      ++  ++E  +  ++L  E D  +  +++++GAGGTESQDWA+ML+RMY R+ E
Sbjct: 92  DVDTAYAKVITDIENLELMNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRYGE 151

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +  +K    +I +G+EAGIKS T+  +G   A+G+LK E GVHRLVR+SP+++  +R TS
Sbjct: 152 QHGYKVTIADIQEGDEAGIKSVTMKFEGGEYAFGFLKSENGVHRLVRVSPFNAQGKRMTS 211

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI----PTG--- 258
           F+S++V P++DD+IE+ +  +    DT+R+ GAGGQ+VN  +S VR+ ++     TG   
Sbjct: 212 FASVFVSPLIDDTIEVFVDPARVSWDTFRSGGAGGQNVNKVESGVRLRYMYQDPDTGEEE 271

Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            ++++  + R Q KN+A+A  +L+++LY+  ++KR E     E+SK +I WG QIRSYV 
Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEAQAKVEASKKKIEWGSQIRSYVF 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + VKD RTN + +    V+DG +D F+KA L
Sbjct: 332 DD-RRVKDHRTNYQTSDVDGVMDGKIDGFIKAYL 364


>gi|288801053|ref|ZP_06406509.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288331987|gb|EFC70469.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 373

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/332 (38%), Positives = 201/332 (60%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +V  A+  M++ + ++  +   KE+  RL  + + L      D+     E 
Sbjct: 36  RTQAPDFWDDVERAQEQMKKVKGIEKWLVGYKEV--RLLADELQLSFDFFHDEMVSESEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +  ++    VE  +  ++L  + D  D  L++++GAGGTESQDWA+ML+R+Y RWAE  
Sbjct: 94  DETYKKALQAVEALELMNMLRQKEDPMDCVLKINSGAGGTESQDWASMLMRLYMRWAESH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             K     + +G+EAGIKS T+ I+G   AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 154 GHKVTISNLQEGDEAGIKSVTMEIEGGEFAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTGV---- 259
           S++V P+VDD+IE+ +  S    D +R+ GAGGQ+VN  ++ VR+    T   TGV    
Sbjct: 214 SVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGVEEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q +N+  A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV   
Sbjct: 274 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + T    V++G +D+F+KA L
Sbjct: 334 -RRVKDHRTNYQTTDVDGVMNGKIDEFIKAYL 364


>gi|325268643|ref|ZP_08135273.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
 gi|324989171|gb|EGC21124.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
          Length = 371

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/333 (38%), Positives = 203/333 (60%), Gaps = 14/333 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +   A+  M++ + ++  I    E   R   +   L     +D+    +E 
Sbjct: 36  RTQAPDFWDDPKRAQEQMKKVKEIEKWIKGYDEA--RSLTDEAQLAFDFYKDELVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                +    +E  + +++L  E D  +  +++++GAGGTESQDWA+ML+RMY RW E  
Sbjct: 94  DTAYDKAFKVIEDLELKNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +K    +I +G+EAGIKS T+  +G   AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 154 GYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259
           S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      TG    +
Sbjct: 214 SVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQ 318
           +++  + R Q KN+A+A  +L+++LY+  ++KR EE A I E+ K +I WG QIRSYV  
Sbjct: 274 LIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQIRSYVFD 332

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + VKD RTN + +    V+DG +D F+KA L
Sbjct: 333 D-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYL 364


>gi|187918069|ref|YP_001883632.1| peptide chain release factor 1 [Borrelia hermsii DAH]
 gi|238689283|sp|B2RZQ6|RF1_BORHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119860917|gb|AAX16712.1| bacterial peptide chain release factor 1 [Borrelia hermsii DAH]
          Length = 357

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/350 (40%), Positives = 210/350 (60%), Gaps = 32/350 (9%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----------NAISFIKEIQDRLCD--N 69
           ++  L  K +D +L +N  E    ++E  +L+          N +S I E Q  L +  N
Sbjct: 12  KIKILEEKLQDINLVKNQKEYAKTVKEYNYLEKIKAKKDEYENILSQINENQKILSEEEN 71

Query: 70  LILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L + EL  +E    ++ ++  +++ +I L         L   E DS +  +E+ AG GG 
Sbjct: 72  LEMKELVKQELAHLNLKKDEVEHMIKILL---------LHQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG + +  LK E GVH
Sbjct: 123 EAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +SN R  TS +++ V P V+D+ +IEI+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRVPITESNGRLQTSAATVAVLPEVEDT-DIEINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIG 307
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E L+K+E+ +N     K ++G
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFENLKKQEQRSN---DRKQQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G    +IR+Y   P   V D R NI      +++ G+L DF+  TLA+K
Sbjct: 299 SGDRSERIRTYNF-PQNRVTDHRANISLYKLEEIMQGEL-DFLLDTLALK 346


>gi|325860237|ref|ZP_08173362.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
 gi|325482324|gb|EGC85332.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
          Length = 371

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/340 (38%), Positives = 208/340 (61%), Gaps = 28/340 (8%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLILLELALEEDD 81
           +T+ P  W +   A+  M++ + +       D A S  +E Q  L  +    EL  EE+ 
Sbjct: 36  RTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEARSLTEETQ--LAFDFYKDELVTEEEV 93

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +   +    ++ ++L+       ++L  E D  +  +++++GAGGTESQDWA+ML+RMY
Sbjct: 94  DAAYAKALKVIEDLELK-------NMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMY 146

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNS 200
            RW E   +K    +I +G+EAGIKS T+  +G   AYG+LK E GVHRLVR+SP+++  
Sbjct: 147 MRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQG 206

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IP 256
           +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      
Sbjct: 207 KRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPD 266

Query: 257 TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
           TG    ++++  + R Q KN+A+A  +L+++LY+  ++KR EE A I E+ K +I WG Q
Sbjct: 267 TGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRIEEQAKI-EAGKKKIEWGSQ 325

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYV    + VKD RTN + +    V+DG +D F+KA L
Sbjct: 326 IRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYL 364


>gi|327312646|ref|YP_004328083.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
 gi|326945641|gb|AEA21526.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
          Length = 371

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/340 (38%), Positives = 208/340 (61%), Gaps = 28/340 (8%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLILLELALEEDD 81
           +T+ P  W +   A+  M++ + +       D A S  +E Q  L  +    EL  EE+ 
Sbjct: 36  RTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEARSLTEETQ--LAFDFYKDELVTEEEV 93

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +   +    ++ ++L+       ++L  E D  +  +++++GAGGTESQDWA+ML+RMY
Sbjct: 94  DAAYAKALKVIEDLELK-------NMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMY 146

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNS 200
            RW E   +K    +I +G+EAGIKS T+  +G   AYG+LK E GVHRLVR+SP+++  
Sbjct: 147 MRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQG 206

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IP 256
           +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      
Sbjct: 207 KRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPD 266

Query: 257 TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
           TG    ++++  + R Q KN+A+A  +L+++LY+  ++KR EE A I E+ K +I WG Q
Sbjct: 267 TGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQ 325

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYV    + VKD RTN + +    V+DG +D F+KA L
Sbjct: 326 IRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYL 364


>gi|212550868|ref|YP_002309185.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549106|dbj|BAG83774.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 328

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/289 (41%), Positives = 186/289 (64%), Gaps = 11/289 (3%)

Query: 73  LELALEEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L+LA + +   ++  +E       + L +E  + +++L  E D   A ++++AGAGGTE+
Sbjct: 34  LQLAFDFNKEGVVSEEEVDKVYSDVVLLIEQLELKNMLHSEEDHLGAVIKINAGAGGTEA 93

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMY+RW E + +K       +G++AGIK+ TL ++G +A+G+LK E GVHRL
Sbjct: 94  QDWVAMLYRMYSRWCEVKMYKVNITNWLEGDDAGIKTVTLQVEGDDAFGYLKSENGVHRL 153

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR+SPY++  +R TSF+S+ V P++DD+IEI+I+  D   DT+R+SGAGGQ+VN  ++ V
Sbjct: 154 VRVSPYNAQGKRMTSFASVAVVPLIDDTIEIDINLGDITWDTFRSSGAGGQNVNKVETGV 213

Query: 251 RITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +          + +V++  + RSQ  NK  A  +L++ LY+LEL++R +     E+ 
Sbjct: 214 RLHYNYKDPNSGETSEIVIENTESRSQFGNKDNAIRLLKSHLYKLELKRRRQAFAKIEAH 273

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYV    + VKD RT  + ++   V+DGDLDD +KA L
Sbjct: 274 KKKIEWGSQIRSYVFDD-RRVKDHRTGWQTSNVQAVMDGDLDDLIKAYL 321


>gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973056|gb|EED91387.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 343

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 197/340 (57%), Gaps = 20/340 (5%)

Query: 22  RLSFLNTKTEDPHLW--QNVIEAKMLMRE--------------RQHLDNAISFIKEIQDR 65
           RL  L T+T  P  W   N   ++++ RE               +   +A+  ++ +QD 
Sbjct: 4   RLQDLETETSSPSFWDASNSDRSEVVTREIGRYTRLKGEMEGWERLRGDALGALELLQDL 63

Query: 66  LCDNLILLELALEEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           L  +        +ED+  +L  +E   + Q++  + +  + ++LLSG  DS    L++ A
Sbjct: 64  LDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGPYDSAQCTLQLTA 123

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW +ML RMY R A+   +K   LE   G+  G KS  LL++G NAYGW KG
Sbjct: 124 GAGGTEACDWVSMLYRMYMRHAQFMDYKVTVLEESVGDVVGYKSVELLVEGVNAYGWFKG 183

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRASGAGGQ 241
           E+G HRLVR+SP+++N++R T+F+ + V P++++    EI+I E +  I T R+ G GGQ
Sbjct: 184 EKGAHRLVRLSPFNANNKRQTTFAGVDVIPLLEEGTVSEIDIPEKELEITTMRSGGKGGQ 243

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++ VR+ HIP+G+ ++C QERSQ +NK  A   L+ +L  +  +++ +  N    
Sbjct: 244 NVNKVETGVRVKHIPSGIAIKCTQERSQSQNKQIALTRLKGQLLVIAQEQQLQSINAIRG 303

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              E  WG QIR+YV+QPY+MVKD R+  E +    VLDG
Sbjct: 304 DIVEASWGAQIRNYVMQPYKMVKDARSGWETSDVEGVLDG 343


>gi|29348961|ref|NP_812464.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340868|gb|AAO78658.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 319

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/261 (45%), Positives = 173/261 (66%), Gaps = 9/261 (3%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  + +++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE   +K     + 
Sbjct: 52  VEALELKNMLRDEADQMACVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQ 111

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDS
Sbjct: 112 EGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDS 171

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270
           IE+ I  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q 
Sbjct: 172 IEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQP 231

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KN+  A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN 
Sbjct: 232 KNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           + +  + V+DG +++F+KA L
Sbjct: 291 QTSDVNGVMDGKIEEFIKAYL 311


>gi|282859886|ref|ZP_06268974.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
 gi|282587289|gb|EFB92506.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
          Length = 374

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/339 (37%), Positives = 208/339 (61%), Gaps = 26/339 (7%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLILLELALEEDD 81
           +T+ P  W++   A+  M++ + +       D A +  +E+Q  L  +    EL  EE+ 
Sbjct: 36  RTQAPDFWEDPDRAREQMKKVKEIERWVKGYDKARAQAEELQ--LAFDFYKDELVTEEEV 93

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +I  +    ++ ++L+       ++L  + D  +  +++++GAGGTESQDWA+ML+RMY
Sbjct: 94  DAIYNKVVATIEDLELK-------NMLRQQEDPMECVMKINSGAGGTESQDWADMLMRMY 146

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNS 200
            RW E   +K    +I  G+EAGIKS T+  +G   A+G+LK E GVHRLVR+SP+++  
Sbjct: 147 MRWGEAHGYKVTISDIQVGDEAGIKSVTMKFEGGEYAFGYLKSENGVHRLVRVSPFNAQG 206

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IP 256
           +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN  +S VR+ +      
Sbjct: 207 KRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPD 266

Query: 257 TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TG    ++++  + R Q KN+A+A  +L+++LY+  ++KR E     E++K +I WG QI
Sbjct: 267 TGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEAQAKVEAAKKKIEWGSQI 326

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV    + VKD RTN + +    V++G LD F+KA L
Sbjct: 327 RSYVFDD-RRVKDHRTNYQTSDVDSVMNGKLDGFIKAYL 364


>gi|304383714|ref|ZP_07366173.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
 gi|304335238|gb|EFM01509.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
          Length = 374

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 122/332 (36%), Positives = 199/332 (59%), Gaps = 12/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W++   A+  M++ + +   +    E+  R   + + L      D+    +E 
Sbjct: 36  RTQAPDFWEDTARAQEQMKKVKGIKRWLDGYAEV--RTLTDELQLAFDFYHDEMVTEEEV 93

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            D+ ++    +E  +  ++L  + D     L++++GAGGTESQDWA ML+RMY RWAE  
Sbjct: 94  EDDYRKAVKAIENLELMNMLRQKEDPMGCVLKINSGAGGTESQDWAQMLMRMYVRWAEAH 153

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            ++     + +G+EAGIKS T+ I+G   AYG+LK E GVHRLVR+SP+++  +R TSF+
Sbjct: 154 GYRCTISNLQEGDEAGIKSVTMEIEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259
           S++V P+VDD+IE+ +  +    D +R+ GAGGQ+VN  ++ VR+    T   TG    +
Sbjct: 214 SVFVSPLVDDTIEVYVDPAKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEI 273

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           +++  + R Q +N+  A  +L+++LY+  ++KR E     E+ K +I WG QIRSYV   
Sbjct: 274 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + VKD RTN + T    V+DG +D+F+KA L
Sbjct: 334 -RRVKDHRTNYQTTDVDGVMDGKIDEFIKAYL 364


>gi|291533125|emb|CBL06238.1| Protein chain release factor B [Megamonas hypermegale ART12/1]
          Length = 182

 Score =  225 bits (573), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 100/155 (64%), Positives = 128/155 (82%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWAE+  F  E  ++  G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D+N
Sbjct: 1   MYGRWAERNGFSVETADLLPGDEAGVKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDAN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           SRRHTSFS+  V P +DD +E++I+ +D R+DTYRASGAGGQH+N TDSAVR+THIPTGV
Sbjct: 61  SRRHTSFSACDVMPEIDDDVEVDINMADVRVDTYRASGAGGQHINKTDSAVRMTHIPTGV 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           V QCQ ERSQ +N+ Q   +LRA+L+ELE++K+E+
Sbjct: 121 VAQCQSERSQLQNREQCLRLLRARLFELEMEKKEK 155


>gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 278

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 113/272 (41%), Positives = 180/272 (66%), Gaps = 6/272 (2%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +L+E   +++ +   ++  +   LL G+ D+  A L+++AGAGG ++QDW  ML RMY  
Sbjct: 1   MLREALTSVEALDKALDAWELRRLLGGKYDAFGAVLQIYAGAGGLDAQDWTEMLERMYLG 60

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W EKR F   A E  +GE  G+K+ATL ++G  AYG+L  E+G HRLVR SP++ ++ R 
Sbjct: 61  WCEKRGFAVRATERLEGEGGGLKTATLEVEGRYAYGYLSSEKGTHRLVRQSPFNKDAARQ 120

Query: 204 TSFSSIWVYPVVDDSIE--IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           TSF+++ V P+ ++ +E  +++ ++D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V
Sbjct: 121 TSFAAVDVIPLFEEDMEEVVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGITV 180

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVLQP 319
           + ++ R+Q  N+  A   ++AKL  L  + R  +IA + G+  K E  WG+QIR+YVL P
Sbjct: 181 KAEEHRTQQLNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAE--WGQQIRNYVLHP 238

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y++VKD+RT +E +  + VL+G LD++M   L
Sbjct: 239 YKLVKDVRTGVETSDANKVLNGALDEYMNGYL 270


>gi|224534432|ref|ZP_03675010.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
 gi|224514534|gb|EEF84850.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
          Length = 357

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 207/343 (60%), Gaps = 13/343 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCD 68
           L   ++A  ++  +  K +D +L +N  +   +++E  HL+      I + K I +++ D
Sbjct: 3   LEKLNSATSKIKSIEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEK-ILNQIND 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
           N  +LE   +++   ++++   +L + K EVE++ +   L   E DS +  +E+ AG GG
Sbjct: 62  NKTILEKEDQQEMKELIKQELIDLDKKKEEVEHEIKILLLPQDENDSKNIIIEIRAGTGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GV
Sbjct: 122 EEAALFANNLYGMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTD
Sbjct: 182 HRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G
Sbjct: 241 SAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            G    +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 299 SGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340


>gi|160902302|ref|YP_001567883.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
 gi|160359946|gb|ABX31560.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
          Length = 356

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/349 (39%), Positives = 211/349 (60%), Gaps = 18/349 (5%)

Query: 13  LFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D+   V++ +  L  +  DP++  ++   K L +E   L    +  +  +  L D   
Sbjct: 3   ILDFKGEVKKKIKELEKQLSDPYITNDIENLKKLGQEHSKLSELNTLFESYEQDLEDIKA 62

Query: 72  LLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGA 125
           L E+       EE+  S+LQE     +  + ++     E L+S  E D  +  +E+ AG 
Sbjct: 63  LREMYENKDVSEEEYQSMLQELEKKEEETRKKI----IEGLVSQDEYDERNIIMEIRAGT 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A+ L+RMY R+AE++ +K E L++++ E  GIK+A L IKG  AY  LK E 
Sbjct: 119 GGDEASLFASELMRMYLRYAERKNWKYELLDLNENELGGIKTAILKIKGQGAYRRLKYES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S+ R HTS +++ V P   D I+++I+E+D RIDTYRASGAGGQ+VN 
Sbjct: 179 GVHRVQRVPQTESSGRIHTSTATVAVLPEATD-IDVQINENDLRIDTYRASGAGGQYVNK 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV CQ ERSQH+NK +A N+LRAKL+E++L+  E+ + + +  K++
Sbjct: 238 TDSAVRITHLPTGIVVTCQNERSQHQNKEKALNILRAKLFEIKLE--EQQSQLTQERKSQ 295

Query: 306 IGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IG  +   +IR+Y   P   V D R        +++LDGDLD+ +   L
Sbjct: 296 IGTAQRSEKIRTYNF-PQNRVTDHRIQYTTHRINEILDGDLDEIIDKLL 343


>gi|255017364|ref|ZP_05289490.1| peptide chain release factor 2 [Listeria monocytogenes FSL F2-515]
          Length = 231

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/228 (49%), Positives = 150/228 (65%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  EE D
Sbjct: 4   RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY
Sbjct: 64  EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R
Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           RHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSA
Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 231


>gi|219685818|ref|ZP_03540627.1| peptide chain release factor 1 [Borrelia garinii Far04]
 gi|219672651|gb|EED29681.1| peptide chain release factor 1 [Borrelia garinii Far04]
          Length = 357

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/344 (38%), Positives = 207/344 (60%), Gaps = 15/344 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCD 68
           L   ++A  ++  L  K +D +L +N  +   +++E  HL+      I + K I  ++ D
Sbjct: 3   LEKLNSATTKIKSLEEKLQDVNLIKNQKKYSKIIKEYTHLEKINTKKIEYEK-ILSQIND 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           N  +LE   +++   ++++   +L + K ++E+ Q + LL    E DS +  +E+ AG G
Sbjct: 62  NKTILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E G
Sbjct: 121 GEEAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTT
Sbjct: 181 VHRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           G G    +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 298 GSGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340


>gi|145627802|ref|ZP_01783603.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979577|gb|EDJ89236.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 183

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/180 (62%), Positives = 142/180 (78%), Gaps = 1/180 (0%)

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID
Sbjct: 1   MSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRID 60

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK
Sbjct: 61  VYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQK 120

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 121 KNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 179


>gi|301346253|ref|ZP_07226994.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301513591|ref|ZP_07238828.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301596660|ref|ZP_07241668.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 201

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 103/200 (51%), Positives = 144/200 (72%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVN 244
            SD R DTYRASGAGGQH+N
Sbjct: 181 PSDVRTDTYRASGAGGQHIN 200


>gi|219684506|ref|ZP_03539449.1| peptide chain release factor 1 [Borrelia garinii PBr]
 gi|219671868|gb|EED28922.1| peptide chain release factor 1 [Borrelia garinii PBr]
          Length = 357

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/344 (38%), Positives = 207/344 (60%), Gaps = 15/344 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCD 68
           L   ++A  ++  L  K +D +L +N  +   +++E  HL+      I + K I  ++ D
Sbjct: 3   LEKLNSATSKIKSLEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEK-ILSQIND 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           N  +LE   +++   ++++   +L + + ++E+ Q + LL    E DS +  +E+ AG G
Sbjct: 62  NKTILEKEDQQEMKELIKQELIDLDKKREDLEH-QIKILLLPQDENDSKNIIIEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E G
Sbjct: 121 GEEAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTT
Sbjct: 181 VHRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++
Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           G G    +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 298 GSGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340


>gi|203284116|ref|YP_002221856.1| peptide chain release factor A [Borrelia duttonii Ly]
 gi|201083559|gb|ACH93150.1| peptide chain release factor A [Borrelia duttonii Ly]
          Length = 359

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 10/248 (4%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +  +E+ AG GG E+  +A+ L  MYT+++EK+K+KTE +  ++ E  G K  + 
Sbjct: 107 ENDDKNIIIEIRAGTGGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSF 166

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG + +  LK E GVHR+ RI   +SN +  TS +++ V P V+D+ +IEI++ D RI
Sbjct: 167 EIKGKDVFKKLKHESGVHRVQRIPITESNGKLQTSAATVAVLPEVEDT-DIEINDKDLRI 225

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-L 289
           D YR+SGAGGQHVNTTDSAVRITH+PTG+V QCQ ERSQHKNK QA  +LRA+LYELE L
Sbjct: 226 DVYRSSGAGGQHVNTTDSAVRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENL 285

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +K+E+ +N     K ++G G    +IR+Y   P   V D R NI      +++ G+LD  
Sbjct: 286 KKQEQRSN---DRKQQVGSGDRSERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSL 341

Query: 347 MKATLAIK 354
           +  TLA+K
Sbjct: 342 LN-TLALK 348


>gi|51598456|ref|YP_072644.1| peptide chain release factor 1 [Borrelia garinii PBi]
 gi|61214604|sp|Q662G9|RF1_BORGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51573027|gb|AAU07052.1| peptide chain release factor 1 [Borrelia garinii PBi]
          Length = 357

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/341 (38%), Positives = 206/341 (60%), Gaps = 15/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++A  ++  +  K +D +L +N  +   +++E  +L+      I + K I  ++ DN  
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDNKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           +LE   +++   ++++   +L + K ++E+ Q + LL    E DS +  +E+ AG GG E
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E GVHR
Sbjct: 124 AALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA
Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G
Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340


>gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
 gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
          Length = 355

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/243 (48%), Positives = 159/243 (65%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  LLRMY R+AEK ++KTE ++ +D    G K   LLI
Sbjct: 105 DEKNIYLEIRAGTGGDEATLFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ RI   +S  R HTS  ++ V P  DD +E+EI  SD RID 
Sbjct: 165 KGKGAYSRLKFEGGGHRVQRIPVTESGGRIHTSACTVAVLPEADD-VEVEIDPSDLRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ KNK +A  +L+AK+ E+E++K+
Sbjct: 224 FRASGAGGQHVNTTDSAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   I  + K ++G G    +IR+Y   P   V D R N+   +   V++G+LD+ + A
Sbjct: 284 QEA--IASNRKLQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYNLDQVMEGELDEIIDA 340

Query: 350 TLA 352
            +A
Sbjct: 341 LIA 343


>gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
 gi|254790874|sp|B8I562|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
          Length = 359

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/350 (38%), Positives = 204/350 (58%), Gaps = 16/350 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   A + R   ++ K  DP +  N  E K  M+E   L+  +   +E   +   + +
Sbjct: 1   MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              LLE  L++D   ++Q+     Q  KLEV  +Q + L+  + D ND     +E+  GA
Sbjct: 61  ARELLEQTLDKDFREMVQQEFQEAQE-KLEVIKRQLKILIVPK-DPNDDKNVIVEIRGGA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A +L R   ++AEK+++K E L+ +  E  G K     I+G  AY  LK E 
Sbjct: 119 GGEEAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S+ R HTS  ++ V P V++ ++++I+ SD RIDTYRASGAGGQH+N 
Sbjct: 179 GVHRVQRVPSTESSGRIHTSTITVAVLPEVEE-VDVDINPSDLRIDTYRASGAGGQHINK 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSA+RITH+PTG+VV CQ ERSQHKNK +A  +LR+KLY  E+ + ++I  + +  K +
Sbjct: 238 TDSAIRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLY--EIAQEQQINEVAQDRKNQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G G    +IR+Y   P   V D R N+       VLDGDLD+ + A + 
Sbjct: 296 VGTGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALIT 344


>gi|203287654|ref|YP_002222669.1| peptide chain release factor A [Borrelia recurrentis A1]
 gi|201084874|gb|ACH94448.1| peptide chain release factor A [Borrelia recurrentis A1]
          Length = 359

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 209/349 (59%), Gaps = 28/349 (8%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD-------RLCDNLILL 73
           +++  L  K +D +L +N  E   +++E  +L+     IKE +D       ++ +N  +L
Sbjct: 13  KKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEK----IKEKKDEYQHILNQINENQKIL 68

Query: 74  ELALEEDDCS---ILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129
               EED+     ++++   +L   K E+E   +   L   E D  +  +E+ AG GG E
Sbjct: 69  S---EEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A+ L  MYT+++EK+K+KTE +  +  E  G K  +  IKG + +  LK E GVHR
Sbjct: 126 AALFAHNLYEMYTKYSEKKKWKTELINFNKTELGGFKEVSFEIKGKDVFKKLKHESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN +  TS +++ V P V+D+ +IEI++ D R D YR+SGAGGQHVNTTDSA
Sbjct: 186 VQRIPITESNGKLQTSAATVAVLPEVEDT-DIEINDKDLRTDVYRSSGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGW 308
           VRITH+PTG+V QCQ ERSQHKNK QA  +LRA+LYELE L+K+E+ +N     K ++G 
Sbjct: 245 VRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQEQRSN---DRKQQVGS 301

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G    +IR+Y   P   V D R NI      +++ G+LD  +  TLA+K
Sbjct: 302 GDRSERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLN-TLALK 348


>gi|111115018|ref|YP_709636.1| peptide chain release factor 1 [Borrelia afzelii PKo]
 gi|119361512|sp|Q0SNW8|RF1_BORAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110890292|gb|ABH01460.1| peptide chain release factor 1 [Borrelia afzelii PKo]
          Length = 357

 Score =  219 bits (557), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/340 (38%), Positives = 205/340 (60%), Gaps = 13/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++A  R+  +  K +D +L +N  +   +++E  +L+      I + + I +++ DN  
Sbjct: 6   LNSATSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEY-ENILNQINDNKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130
           +LE   +++   ++++   +L + K  +E++ +   L   E DS +  +E+ AG GG E+
Sbjct: 65  ILEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+
Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSAV
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G 
Sbjct: 244 RITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 302 RSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340


>gi|168334105|ref|ZP_02692318.1| peptide chain release factor 1 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 356

 Score =  219 bits (557), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/335 (38%), Positives = 202/335 (60%), Gaps = 11/335 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLILLELA 76
           V +   ++ K  +P +  + +  + LM+E   L   +   KE +  L    D+L++LE  
Sbjct: 9   VVKFENISAKVNEPAVIADQVTWRALMKEISTLSPIVEKYKEYKTVLTAIDDSLLMLEEK 68

Query: 77  LEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           L++D  +++ +E SDN +R++   E  +   L +   D  +  +E+  GAGG E+  +A 
Sbjct: 69  LDDDMLALVKEELSDNKKRVEPLEEELKILLLPTDPNDEKNVIVEIRGGAGGDEAALFAA 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY R+AE+ K+KTE ++I++    G K A  ++KG  AY  LK E GVHR+ R+  
Sbjct: 129 DLYRMYHRFAERSKWKTELMDINENGIGGFKEAIFMLKGDGAYSRLKYESGVHRVQRVPD 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S+ R HTS  ++ + P  +D +++E++ +D ++D +R+SG GGQ VNTTDSAVR+TH+
Sbjct: 189 TESSGRIHTSTVTVAIMPEAED-VDVEVNPNDVKVDVFRSSGNGGQSVNTTDSAVRLTHL 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV CQ E+SQ KNK +A  +LRAKLYELEL K++  A I    K+++G G    +I
Sbjct: 248 PTGIVVSCQDEKSQLKNKDKAMKVLRAKLYELELNKQK--ALIAAEKKSQVGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           R+Y   P   V D R  +       VLDGDL++ +
Sbjct: 306 RTYNF-PQGRVTDHRVGLTVHKLEQVLDGDLEEII 339


>gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 289

 Score =  218 bits (556), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 117/280 (41%), Positives = 177/280 (63%), Gaps = 19/280 (6%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           D   +  E SD +  ++  +E  +   LL G  D+  A + ++AGAGGT++QDW+ ML R
Sbjct: 10  DVPELASEVSDAVNALEGALEAWEARRLLGGTYDALGATVFIYAGAGGTDAQDWSEMLER 69

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS- 198
            Y +WA++R F         G+EAG+KS TL I+G  AYG+L  E+G HRLVR SP++  
Sbjct: 70  CYLQWADRRGFAVRVEARTPGDEAGLKSVTLEIEGRYAYGYLASEKGTHRLVRTSPFNKG 129

Query: 199 -----NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
                ++ R TSF+++ V P ++D IE         + T R+ GAGGQ+VN  ++AVR+ 
Sbjct: 130 AFSFIHATRQTSFAAVDVMPTLEDKIE---------VTTMRSGGAGGQNVNKVETAVRMK 180

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQ 311
           H+PTG+VV+C++ERSQ  N+A+A   L+AKL  +  ++R  ++A + G+  K E  WG+Q
Sbjct: 181 HLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVKAE--WGQQ 238

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+YV  PY+MVKD+RT +E +    V++G LD+F  A L
Sbjct: 239 IRNYVFHPYKMVKDVRTGMETSDVEGVMNGKLDEFQNAWL 278


>gi|150021273|ref|YP_001306627.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
 gi|149793794|gb|ABR31242.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
          Length = 358

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/250 (47%), Positives = 159/250 (63%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E    + +LE+ AG GG E+  +A  LLRMY R+ EK+ FK E ++ +  +  G K
Sbjct: 95  LPKNEYSGKNVFLEIRAGTGGEEAALFAADLLRMYLRYVEKKNFKAEIVDENKTDLGGYK 154

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              + IKG N    LK E GVHR+ R+   +S  R HTS +++ V P V + +EIEI+ S
Sbjct: 155 EVVVRIKGKNVGNLLKYESGVHRVQRVPTTESGGRIHTSTATVAVLPEVSN-VEIEINPS 213

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQ+VN T+SAVRITHIPTG+VV CQ ERSQ +NK QA N+LRA+LY+
Sbjct: 214 DIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQSERSQLQNKEQAMNILRARLYK 273

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L+L+  E+   I  + K++IG G    +IR+Y   P   V D R N    +   VLDG+L
Sbjct: 274 LKLE--EQAKKISSNRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYNLQAVLDGEL 330

Query: 344 DDFMKATLAI 353
           D+F+   + I
Sbjct: 331 DEFITRLMRI 340


>gi|15594541|ref|NP_212330.1| peptide chain release factor 1 [Borrelia burgdorferi B31]
 gi|216264551|ref|ZP_03436543.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218249543|ref|YP_002374724.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221217544|ref|ZP_03589014.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223889241|ref|ZP_03623829.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224532854|ref|ZP_03673469.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224534094|ref|ZP_03674677.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225549805|ref|ZP_03770769.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226321514|ref|ZP_03797040.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|3914620|sp|O51214|RF1_BORBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739097|sp|B7J1C9|RF1_BORBZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2688096|gb|AAC66592.1| peptide chain release factor 1 (prfA) [Borrelia burgdorferi B31]
 gi|215981024|gb|EEC21831.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218164731|gb|ACK74792.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221192607|gb|EEE18824.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223885274|gb|EEF56376.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224512243|gb|EEF82629.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224512793|gb|EEF83161.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225369613|gb|EEG99062.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226232703|gb|EEH31456.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|312148526|gb|ADQ31185.1| peptide chain release factor 1 [Borrelia burgdorferi JD1]
          Length = 357

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 205/341 (60%), Gaps = 15/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++A  ++  +  K +D +L ++  +   +++E  +L+      I + K I  ++ D   
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDTKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           +LE   +++   ++++   +L + K ++E+ Q + LL    E DS +  +E+ AG GG E
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR
Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA
Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G
Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340


>gi|328466430|gb|EGF37577.1| peptide chain release factor 2 [Lactobacillus rhamnosus MTCC 5462]
          Length = 189

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/186 (53%), Positives = 135/186 (72%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +E D  +  E    L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML
Sbjct: 4   DEPDPDLQHEEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSML 63

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY RWA++  FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+D
Sbjct: 64  MRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFD 123

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  RRHTSF+S+ V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H+PT
Sbjct: 124 SAGRRHTSFASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPT 183

Query: 258 GVVVQC 263
           G+V   
Sbjct: 184 GIVTSS 189


>gi|216263966|ref|ZP_03435960.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
 gi|215980010|gb|EEC20832.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
          Length = 357

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/340 (37%), Positives = 204/340 (60%), Gaps = 13/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++   R+  +  K +D +L +N  +   +++E  +L+      I + + I +++ DN  
Sbjct: 6   LNSVTSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEY-ENILNQINDNKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130
           +LE   +++   ++++   +L + K  +E++ +   L   E DS +  +E+ AG GG E+
Sbjct: 65  ILEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+
Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSAV
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G 
Sbjct: 244 RITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 302 RSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340


>gi|225552361|ref|ZP_03773301.1| peptide chain release factor 1 [Borrelia sp. SV1]
 gi|225371359|gb|EEH00789.1| peptide chain release factor 1 [Borrelia sp. SV1]
          Length = 357

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 205/341 (60%), Gaps = 15/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++A  ++  +  K +D +L ++  +   +++E  +L+      I + K I  ++ D   
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIVKEYTYLEKINTKKIEYEK-ILSQINDTKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           +LE   +++   ++++   +L + K ++E+ Q + LL    E DS +  +E+ AG GG E
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR
Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA
Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G
Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFIQGELDPLL 340


>gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
 gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
          Length = 359

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/350 (38%), Positives = 206/350 (58%), Gaps = 16/350 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   A + R   ++ K  DP +  N  E K  M+E   L+  +   +E   +   + +
Sbjct: 1   MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              LL+  L++D   ++Q+     Q  KLEV  +Q + L+  + D ND     +E+  GA
Sbjct: 61  ARELLDQTLDKDFREMVQQEFQEAQE-KLEVIKRQLKILIVPK-DPNDDKNVIVEIRGGA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A +L R  T++AEK+++K E ++ +  E  G K     I+G  AY  LK E 
Sbjct: 119 GGEEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S+ R HTS  ++ V P V++ ++++I+ +D RIDTYRASGAGGQH+N 
Sbjct: 179 GVHRVQRVPSTESSGRIHTSTITVAVLPEVEE-VDVDINPNDLRIDTYRASGAGGQHINK 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSA+RITH+P+G+VV CQ ERSQHKNK +A  +LR+KLY  E+ + ++I  + +  K++
Sbjct: 238 TDSAIRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLY--EIAQEQQINEVAQDRKSQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G G    +IR+Y   P   V D R N+       VLDGDLD+ + A + 
Sbjct: 296 VGTGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALIT 344


>gi|182420270|ref|ZP_02951499.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237666557|ref|ZP_04526542.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182375865|gb|EDT73457.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237657756|gb|EEP55311.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 360

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 194/334 (58%), Gaps = 11/334 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP + QN  E + L +E   L+  ++  KE +    D     E+  EE+D  + 
Sbjct: 16  LSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYKEYKKVTEDLEANKEMLSEENDKEMR 75

Query: 86  QETSDNLQRI-KLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141
           +  S+ +  + K EVE +    +L    D ND    ++E+  GAGG E+  +A  L RMY
Sbjct: 76  EMLSEEISDLTKREVELENHIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFAYNLFRMY 135

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+AE +++  E + +++ +  G K    +IKG  AY  LK E GVHR+ R+   +S+ R
Sbjct: 136 TRYAETQRWAVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSGR 195

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS S++ V P VDD +EIEISE D RID +RASG GGQ VNTTDSAVRITH+P+G+VV
Sbjct: 196 IHTSTSTVAVLPEVDD-VEIEISEKDLRIDVFRASGNGGQCVNTTDSAVRITHLPSGLVV 254

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQ KNK +A  +L+++LY  E  +RE    I E  K+++G G    +IR+Y   
Sbjct: 255 SCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAEGIAEDRKSQVGTGDRSERIRTYNY- 311

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           P   V D R  +        L+GD+D+ + A + 
Sbjct: 312 PQGRVTDHRIGLTLYKLETFLNGDIDEMINALIT 345


>gi|227486771|ref|ZP_03917087.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235241|gb|EEI85256.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 358

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/337 (39%), Positives = 196/337 (58%), Gaps = 17/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDC 82
           L  K  DP +  ++ + + + +E   L   +   +EI   +D + +N    EL  E DD 
Sbjct: 15  LEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAENQ---ELINEADDQ 71

Query: 83  SILQETSDNLQ--RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            ++Q   D ++  + KLEV   + + LL      D  D  +E+  GAGG E+  +A  L 
Sbjct: 72  DMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAGGDEAGLFAGDLY 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY  +A+K  FKTE +E++     GIK AT +++G  AY  LK E GVHR+ R+   +S
Sbjct: 132 RMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESGVHRVQRVPETES 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P VD+ +E+ I  +D R D YR+SG GGQ VNTTDSAVR+THIPTG
Sbjct: 192 GGRIHTSTATVAVLPEVDE-VELHIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV  Q E+SQ KNK +A  +LRA+LYELE QKR +   I ++ K+++G G    +IR+Y
Sbjct: 251 LVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNK--EIADNRKSQVGTGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   + D R N       D L+GD++D + + +A
Sbjct: 309 NF-PQGRITDHRINKTIYQLDDFLNGDIEDMINSLIA 344


>gi|225548553|ref|ZP_03769601.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
 gi|225370816|gb|EEH00251.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
          Length = 357

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 113/244 (46%), Positives = 156/244 (63%), Gaps = 7/244 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E DS +  +E+ AG GG E+  +AN L  MY +++EK+K+KTE +  ++ E  G K
Sbjct: 101 LPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFK 160

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
                IKG + +  LK E GVHR+ RI   +SN R  TS +++ V P ++++ EI+I+E 
Sbjct: 161 EIIFEIKGKDVFKKLKYESGVHRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEK 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YR+SGAGGQHVNTTDSAVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE
Sbjct: 220 DLRIDVYRSSGAGGQHVNTTDSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYE 279

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            E  K++E      + K ++G G    +IR+Y   P   + D R NI      + + G+L
Sbjct: 280 FEDSKKQE--QRSSNRKQQVGSGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGEL 336

Query: 344 DDFM 347
           D  +
Sbjct: 337 DPLL 340


>gi|217077770|ref|YP_002335488.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
 gi|217037625|gb|ACJ76147.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
          Length = 358

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 117/250 (46%), Positives = 160/250 (64%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E    + +LE+ AG GG E+  +A  LLRMY R+ EK+ FK E ++ +  +  G K
Sbjct: 95  LPESEYSGKNVFLEIRAGTGGEEAALFAADLLRMYLRYVEKKNFKAEIVDENKTDLGGYK 154

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              + IKG N    LK E GVHR+ R+   +S  R HTS +++ V P V + +EIEI+ S
Sbjct: 155 EVVIKIKGKNVGNLLKYESGVHRVQRVPTTESGGRIHTSTATVAVLPEVSN-VEIEINPS 213

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQ+VN T+SAVRITHIPTG+VV CQ ERSQ +NK QA N+LRA+L++
Sbjct: 214 DIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQSERSQLQNKEQAMNILRARLFK 273

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L+L+++E    I  + K++IG G    +IR+Y   P   V D R N    +   VLDG+L
Sbjct: 274 LKLEEQER--KISSNRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYNLQAVLDGEL 330

Query: 344 DDFMKATLAI 353
           D+F+   + I
Sbjct: 331 DEFITRLMRI 340


>gi|153007050|ref|YP_001381375.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
 gi|166223527|sp|A7HI45|RF1_ANADF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152030623|gb|ABS28391.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
          Length = 372

 Score =  215 bits (548), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 196/336 (58%), Gaps = 12/336 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR   L     DP +  N    + + +ER  L+  +  ++  + +L  ++   E  LEE 
Sbjct: 15  QRFEELTALLSDPSVASNGDRFRKVSKERASLEPTVEALRAYR-KLVTDIGDNEALLEEK 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +   + L +++ +V+  + +  L       AD  D  LE+ AGAGG E+  +A  
Sbjct: 74  DPDLREMAKEELAQLRPQVDPAEEQLKLYLVPKDPADEKDVILEIRAGAGGDEAGLFAAE 133

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE+R ++TE  +   G   G+K  T+ I G + Y WLK E GVHR+ R+   
Sbjct: 134 LLRMYLRYAERRGWRTEVADTSAGNLGGVKDVTVNIAGDSVYSWLKFESGVHRVQRVPAT 193

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  +D I+I++S +D  +D +R++G+GGQ VNTTDSAVR+TH P
Sbjct: 194 EAQGRIHTSTVTVAVMPEAED-IDIQVSPADIEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG++V+CQQE+SQ KN+  A  MLRAKLYE+EL+++    +   + K+++G G    +IR
Sbjct: 253 TGIIVKCQQEKSQLKNRNMAMRMLRAKLYEIELERQRSARDA--ARKSQVGTGDRSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   + D R N  + +   V+DGD+ D + A
Sbjct: 311 TYNF-PQDRLTDHRINYTRHNLPAVMDGDVQDVIDA 345


>gi|195941927|ref|ZP_03087309.1| peptide chain release factor 1 [Borrelia burgdorferi 80a]
          Length = 357

 Score =  215 bits (548), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/341 (37%), Positives = 204/341 (59%), Gaps = 15/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++   ++  +  K +D +L ++  +   +++E  +L+      I + K I  ++ D   
Sbjct: 6   LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDTKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           +LE   +++   ++++   +L + K ++E+ Q + LL    E DS +  +E+ AG GG E
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR
Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA
Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G
Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYRLEEFMQGELDPLL 340


>gi|303239757|ref|ZP_07326281.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
 gi|302592694|gb|EFL62418.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
          Length = 360

 Score =  215 bits (548), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/350 (38%), Positives = 204/350 (58%), Gaps = 18/350 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68
           +FD   A + R   +N K  DP + +N  E + LM+E    Q L       K++   + D
Sbjct: 1   MFDRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIAD 60

Query: 69  NLILLELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              LL   L++D   +    L+E  + L++IK E+   +   L     D  D  +E+  G
Sbjct: 61  AKELLNDKLDKDFREMVEMELKEAEEGLEKIKKEL---KILLLPKDPNDEKDVIVEIRGG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A +L RMYTR+AE+  +KTE L+ +  E  G K     I+G  A+  LK E
Sbjct: 118 AGGEEAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ RI   ++N R HTS  ++ V P V++ ++++I+ +D RIDTYRASGAGGQH+N
Sbjct: 178 SGVHRVQRIPETEANGRIHTSTVTVAVLPEVEE-VDVDINPNDLRIDTYRASGAGGQHIN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSA+RITHIPTG+VV CQ +RSQ+KNK +A  +LR+KLYE+  +++   + I ++ K 
Sbjct: 237 KTDSAIRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQN--SEIAQARKG 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++G G    +IR+Y   P   + D R  +       +L+GD+D+ + A +
Sbjct: 295 QVGTGDRSERIRTYNY-PQGRMTDHRIGLTLYKLESILEGDMDEVIDALI 343


>gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 406

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/281 (43%), Positives = 168/281 (59%), Gaps = 11/281 (3%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           IL +LA EE    +L E    + R++ + +  + E LLSG  D   A L + AGAGGTE+
Sbjct: 105 ILSQLASEER-AMLLDEFRSAIARLREDSDRFELELLLSGPYDHAPARLLLTAGAGGTEA 163

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW   L RMY R  E         +   GE  G KS  LL+ G NAYGWL+GE+G HR+
Sbjct: 164 NDWVGDLKRMYQRHCEAMGLSCVVQDEQAGEAVGYKSVELLVSGDNAYGWLQGEKGAHRM 223

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV----DDSI--EIEISESDCRIDTYRASGAGGQHVN 244
           VR+SP+++N++R T+F+ + V P +    DD+    I++ ES+  I T RA G GGQ+VN
Sbjct: 224 VRLSPFNANNKRQTTFAGVDVAPDILNQDDDAYWNTIDVPESELEITTMRAGGKGGQNVN 283

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SS 302
             +SAVRI H+P+G+ V+C QERSQ  NK  A   L+A+L  L + + + +A I E    
Sbjct: 284 KVNSAVRIKHLPSGLQVKCAQERSQSMNKNIALKRLKAQL--LAIVQEQRVAEIKEIRGD 341

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             E  WG QIR+YV  PY+MVKD RT  E ++    +DGDL
Sbjct: 342 MVEASWGAQIRNYVFHPYKMVKDQRTGWETSNVQAFMDGDL 382


>gi|119952993|ref|YP_945202.1| peptide chain release factor 1 [Borrelia turicatae 91E135]
 gi|254790864|sp|A1QYZ0|RF1_BORT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119861764|gb|AAX17532.1| bacterial peptide chain release factor 1 [Borrelia turicatae
           91E135]
          Length = 357

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/338 (40%), Positives = 201/338 (59%), Gaps = 31/338 (9%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----------NAISFIKEIQDRLCD--N 69
           ++  L  K +D +L +N  E   +++E  +L+          N IS I E Q  L +  N
Sbjct: 12  KIKILEEKLQDTNLIKNQKEYAKVIKEYNYLEKIKEKKDEYENIISQIDENQKILSEEEN 71

Query: 70  LILLELALEEDDCSILQE-TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L + EL        I QE T  NL++ ++E   K    L   E D+ +  +E+ AG GG 
Sbjct: 72  LEMKEL--------IKQELTHLNLKKDEIEHTIKIL-LLHQDENDNKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG   +  LK E GVH
Sbjct: 123 EAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKEVFKKLKHESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +SN R  TS +++ V P V+++ +IEI+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRVPITESNGRLQTSAATVAVLPEVEET-DIEINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIG 307
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LY+ E L+K+E+ +N     K ++G
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYKFEDLKKQEQRSN---DRKQQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            G    +IR+Y   P   V + R NI      +++ G+
Sbjct: 299 SGDRSERIRTYNF-PQNRVTEHRANISLYKLEEIMQGE 335


>gi|161833777|ref|YP_001597973.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
 gi|152206267|gb|ABS30577.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
          Length = 214

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 149/216 (68%), Gaps = 4/216 (1%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           ML RMY  WAEK  FK + +    G+  G++S T ++KG + +G+LKGE GVHRLVRISP
Sbjct: 1   MLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGYLKGENGVHRLVRISP 60

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D NS+RHTSF+S+++YP++DD I I+I+ SD   +T+R+ G+GGQ+VN  +S VR+ H 
Sbjct: 61  FD-NSKRHTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGGQNVNKVESGVRLHHH 119

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PT ++++  + +SQ  NK +A  +L+++L+ +E + +    N     K +I W  QIR+Y
Sbjct: 120 PTNIIIENSETKSQFNNKIKALKLLKSRLFYIEKKSKNTTCN---KLKKKIEWSSQIRNY 176

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ PY++VKDLRT  E +    VL+G++D F+K  L
Sbjct: 177 IMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 212


>gi|157825817|ref|YP_001493537.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
 gi|166223595|sp|A8GNQ4|RF1_RICAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157799775|gb|ABV75029.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
          Length = 355

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 204/349 (58%), Gaps = 29/349 (8%)

Query: 16  WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +DN  ++LS       F+    E   L   V++ K   + +  L+ A +F  E+     D
Sbjct: 14  YDNLGKKLSSGIMGDEFVKASKEYAELEDVVVKIKEYNKAKSELEEANNFKLELG---FD 70

Query: 69  NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           N  L   A+ ED+  IL+ +   L+R +K+ +       L   +ADS  A +EV AG+GG
Sbjct: 71  NATL---AMIEDEIHILENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E + +E+     +S + +IG
Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRNKEQ--ERADSRRGQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIA 345


>gi|28210063|ref|NP_781007.1| peptide chain release factor 1 [Clostridium tetani E88]
 gi|32171526|sp|Q898Y5|RF1_CLOTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28202498|gb|AAO34944.1| bacterial peptide chain release factor 1 [Clostridium tetani E88]
          Length = 355

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/351 (37%), Positives = 211/351 (60%), Gaps = 24/351 (6%)

Query: 22  RLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLI 71
           RL+F+  K E       DP + Q+  E + L +E   ++  ++  KE ++ L    DN  
Sbjct: 4   RLNFIENKYEELSIKISDPTVMQDQKEWQKLCKEHSDMETIVTTYKEYKEVLQSIEDNKE 63

Query: 72  LLELALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127
           +L+  +E++   ++QE    L QR++   E +Q   +L    D ND    ++E+ AGAGG
Sbjct: 64  MLKEDIEQELRDMVQEDIKELEQRVQ---ELEQELKMLLVPKDPNDEKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTEA+ +++ +  G K    +++G  AY  LK E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHNWKTEAVSVNETDIGGFKEIVFMVRGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V+D +++EI+++D R+D YRASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLPEVED-VDVEINQNDLRVDVYRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQ KNK +A  +L+++LY++   +R   A+I E  K+++G
Sbjct: 240 SAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYDMLESERS--ASIAEDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        LDGD+++ +   + +++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESFLDGDIEEMIDGLITVEQ 347


>gi|312148979|gb|ADQ29050.1| peptide chain release factor 1 [Borrelia burgdorferi N40]
          Length = 357

 Score =  213 bits (542), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/341 (37%), Positives = 204/341 (59%), Gaps = 15/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++   ++  +  K +D +L ++  +   +++E  +L+      I + K I  ++ D   
Sbjct: 6   LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDTKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           +LE   +++   ++++   +L + K ++E+ Q + LL    E DS +  +E+ AG GG E
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR
Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA
Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ ERSQ+KNK QA  +LRA+LYE E  K++E      + K ++G G
Sbjct: 243 VRITHLPTGIVVQCQNERSQYKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340


>gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of E.Coli 70s Ribosome Bound With
           Rf1
          Length = 333

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 162/250 (64%), Gaps = 8/250 (3%)

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           Y++   LLS EA S+ A +E+  G GG E+  +A  L RMYTR+AE++ +  E  EIH+ 
Sbjct: 73  YQELLFLLSPEA-SDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHET 131

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS +++ V P +++  +
Sbjct: 132 DLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEK-D 190

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           IEI   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ++NK  A  +L
Sbjct: 191 IEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRIL 250

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           RA+LY+L+ +++E    I +  K++IG G    +IR+Y   P   V D R N       +
Sbjct: 251 RARLYQLQKEQKER--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQE 307

Query: 338 VLDGDLDDFM 347
           +LDGDLD+ +
Sbjct: 308 ILDGDLDEII 317


>gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
 gi|7388056|sp|Q9X183|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1
 gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8]
          Length = 342

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 162/250 (64%), Gaps = 8/250 (3%)

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           Y++   LLS EA S+ A +E+  G GG E+  +A  L RMYTR+AE++ +  E  EIH+ 
Sbjct: 73  YQELLFLLSPEA-SDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHET 131

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS +++ V P +++  +
Sbjct: 132 DLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEK-D 190

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           IEI   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ++NK  A  +L
Sbjct: 191 IEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRIL 250

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           RA+LY+L+ +++E    I +  K++IG G    +IR+Y   P   V D R N       +
Sbjct: 251 RARLYQLQKEQKER--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQE 307

Query: 338 VLDGDLDDFM 347
           +LDGDLD+ +
Sbjct: 308 ILDGDLDEII 317


>gi|323445681|gb|EGB02173.1| hypothetical protein AURANDRAFT_35500 [Aureococcus anophagefferens]
          Length = 268

 Score =  212 bits (539), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 111/257 (43%), Positives = 162/257 (63%), Gaps = 11/257 (4%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E+ ++G  D  D  LE+ AGAGG ++Q+W  M+ RMY R+ EKR F     E  +G+ 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 163 AG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIE 220
            G +K  +L I+G NA+G  +GE+G HRLVR SP++S ++R TSF+S+   P + DD  +
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 221 I-----EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +     E+  +D  + T RA GAGGQ+VN  ++AVR+TH+PTG+ V+C +ER+Q  NKA 
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRMTHVPTGLRVRCARERTQGANKAI 180

Query: 276 AWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A  MLRAKL   +  Q+   +A+I    +    +G  +RSYVL PY++VKD +   E   
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADI-RGDRVAADFGASVRSYVLHPYKLVKDDKH--ETPH 237

Query: 335 PSDVLDGDLDDFMKATL 351
            +DVLDGDL  F+ A L
Sbjct: 238 ATDVLDGDLGPFLDAEL 254


>gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 357

 Score =  212 bits (539), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 193/332 (58%), Gaps = 14/332 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           + ++  DP +  NV E + L R    L   +   +E + ++  +L   +  LE+DD  + 
Sbjct: 17  IESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYR-KVMRSLEEAQELLEQDDEEMR 75

Query: 86  QETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           Q   + +QR+      LE + K    L     D  +  +E+ AGAGG E+  +A  L RM
Sbjct: 76  QLAKEEVQRLSDMLPGLEQDLKVL-LLPRDPNDHKNVIIEIRAGAGGDEAALFAADLFRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+ E++ ++ E +E+++    G K    L+KG  AY  LK E GVHR+ RI   +++ 
Sbjct: 135 YTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFESGVHRVQRIPVTEASG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P  +D ++++I   D +IDTYRASGAGGQ+VN TDSAVRITHIPTG+V
Sbjct: 195 RIHTSTATVAVLPEAED-VDVQIRPEDLKIDTYRASGAGGQYVNMTDSAVRITHIPTGLV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ ERSQ KN+A+A  +LRA+LY+ ELQK++  A +    K ++G G    +IR+Y  
Sbjct: 254 VTCQDERSQLKNRAKAMQLLRARLYDQELQKQQ--AQMAAERKGQVGTGDRSERIRTYNY 311

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            P   + D R          VLDGDL + ++A
Sbjct: 312 -PQNRLTDHRIGFTLYKLDQVLDGDLYELIEA 342


>gi|329913866|ref|ZP_08275999.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545272|gb|EGF30526.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 164

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/161 (61%), Positives = 130/161 (80%), Gaps = 1/161 (0%)

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +R SP+DS + RHTSFSS++VYP VDDS+EI+I+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 1   MRKSPFDSANGRHTSFSSLFVYPEVDDSLEIDINPADVRVDTYRASGAGGQHINKTDSAV 60

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VVQCQ +RSQH+N+A+AW ML+++LYE E++KR       E SKT+IGWG 
Sbjct: 61  RLTHGPTGIVVQCQNDRSQHRNRAEAWAMLKSRLYEHEMRKRMSDQQKLEDSKTDIGWGH 120

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL   + +KDLRT+ E  +   VLDGD+D+F+ A+L
Sbjct: 121 QIRSYVLDQSR-IKDLRTSFETGNTKAVLDGDIDEFIAASL 160


>gi|254520297|ref|ZP_05132353.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
 gi|226914046|gb|EEH99247.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
          Length = 361

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 191/333 (57%), Gaps = 11/333 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP +  N  E + L +E   L+  ++  KE +  + D     E+  EE D  + 
Sbjct: 16  LSVKISDPSIMANQNEWRKLCKEHADLEVIVTAYKEYRTVIDDLAANKEMLAEESDREMR 75

Query: 86  QETSDNLQRIKL-EVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141
           +  S+ +  +   E E ++   +L    D ND    ++E+  GAGG E+  +A  L RMY
Sbjct: 76  EMLSEEISDLTAREGELEKHIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFAANLFRMY 135

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+AE +++  E +  ++ +  G K    +IKG  AY  LK E GVHR+ R+   +S+ R
Sbjct: 136 TRYAETQRWSVELMSANETDIGGFKEVVFMIKGSGAYSKLKYESGVHRVQRVPDTESSGR 195

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P VDD +EIEI+E D RID YR+SG GGQ VNTTDSAVRITHIPTGVVV
Sbjct: 196 IHTSTATVAVLPEVDD-VEIEINEKDLRIDVYRSSGNGGQCVNTTDSAVRITHIPTGVVV 254

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQ KNK +A  +LR++LYE    +R   A I E  K+++G G    +IR+Y   
Sbjct: 255 ACQDEKSQLKNKEKAMKVLRSRLYEAAEAERN--AGIAEDRKSQVGSGDRSERIRTYNY- 311

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           P   V D R  +        L+GD+++ + A +
Sbjct: 312 PQGRVTDHRIGLTLYKLESYLNGDIEEVINALI 344


>gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8]
 gi|166223568|sp|A1U367|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter
           aquaeolei VT8]
          Length = 363

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 157/235 (66%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ + +LE+ AG GG E+  +A  L RMY+R+AEKR+++ E L  ++GE  G K     +
Sbjct: 109 DTKNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARL 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P  D++  +EI+++D R+DT
Sbjct: 169 SGDGVYGTLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L   EL+K+
Sbjct: 229 FRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++  ++ E+ K+ +G G    +IR+Y   P   V D R N+      +V+ GDLD
Sbjct: 289 QK--SMAETRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLD 340


>gi|302875888|ref|YP_003844521.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|307689321|ref|ZP_07631767.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|302578745|gb|ADL52757.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
          Length = 358

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/358 (39%), Positives = 196/358 (54%), Gaps = 39/358 (10%)

Query: 20  VQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE----------- 61
           ++RL+F       L+ K  DP +  N  E + L +E   L   ++  KE           
Sbjct: 2   LERLNFIENKYDELSIKISDPSIMSNQKEWQKLCKEHSDLGIVVNKYKEYKKTIEDIEDN 61

Query: 62  ---IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
              IQD   D   L ELA EE  +  IL+   +   RI L         L     D  + 
Sbjct: 62  KEMIQDGSLDPE-LKELASEEIKELEILKNKYEEELRILL---------LPKDPNDDKNV 111

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           Y+E+ AGAGG E+  +AN L RMY R+AE    + E + I+  +  GIK   ++IKG  A
Sbjct: 112 YVEIRAGAGGEEAALFANNLTRMYARYAETHGCRVETISINPTDLGGIKEIVMMIKGTGA 171

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E GVHR+ R+   +S+ R HTS +++ + P VDD +EIEIS +D RID +RASG
Sbjct: 172 YSKLKYESGVHRVQRVPDTESSGRIHTSTATVAIMPEVDD-VEIEISANDLRIDVFRASG 230

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A N+L+A+L+E    +R   A+
Sbjct: 231 HGGQCVNTTDSAVRITHLPTGIVVSCQDEKSQLKNKEKALNVLKARLFEKAESERS--AS 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           I E  K+++G G    +IR+Y   P   V D R  +        LDG +D+ + A + 
Sbjct: 289 IAEDRKSQVGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGAIDEVINALIT 345


>gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
 gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
          Length = 364

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 156/242 (64%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY+R+AE+R+++ E L   +GE  G K     +
Sbjct: 111 DGKNVFLEVRAGTGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   +S  R HTS  ++ V P  D++  +EI++ D R+DT
Sbjct: 171 AGSGVYGTLKFESGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A ++L ++L  +E ++ 
Sbjct: 231 FRASGAGGQHVNKTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERA 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +  ++ E+ K+ +G G    +IR+Y   P   V D R N+      +V+ GDLD  +K 
Sbjct: 291 HQ--SMAETRKSLVGSGDRSERIRTYNF-PQSRVTDHRINLTLYKLDEVIAGDLDSVVKP 347

Query: 350 TL 351
            L
Sbjct: 348 LL 349


>gi|187935755|ref|YP_001884696.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
 gi|238691625|sp|B2TJY5|RF1_CLOBB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187723908|gb|ACD25129.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
          Length = 360

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/335 (38%), Positives = 198/335 (59%), Gaps = 13/335 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD---C 82
           L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +E D    
Sbjct: 16  LSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSDESDREMK 75

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L E   +L + ++E+E K+ + LL      D  + ++E+  GAGG E+  +A  L RM
Sbjct: 76  EMLNEEIASLSQREVELE-KEIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFAYNLFRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+   +S+ 
Sbjct: 135 YTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P VDD +EIEI++ D RID +RASG GGQ VNTTDSAVRITH+P+G+V
Sbjct: 195 RIHTSTVTVAVLPEVDD-VEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITHLPSGLV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ E+SQ KNK +A  +LR++L+E   Q+R +   I    K+++G G    +IR+Y  
Sbjct: 254 VSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSERIRTYNY 311

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   + D R  +        LDGD+ + + A + 
Sbjct: 312 -PQGRITDHRIGLTLYKLDSFLDGDVQEMINALIT 345


>gi|88607753|ref|YP_505069.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598816|gb|ABD44286.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 226

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 141/212 (66%), Gaps = 1/212 (0%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           +AK L+ ER  +   ++  + ++    D   L E+  + DD   L   +  LQ +KL + 
Sbjct: 7   KAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRIS 66

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEALEIHD 159
            K+ E + S EAD+N  +L + +GAGGTES DW  MLLRMYT+WAE   +F  E ++  D
Sbjct: 67  QKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVD 126

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GEE G+K+ T+ I G  AYGW + E G+HRLVRISP+D  ++RHTSF+S+ V PVVD  I
Sbjct: 127 GEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEI 186

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +I+I E D RIDTYRASGAGGQHVN T+SAVR
Sbjct: 187 DIKILEKDLRIDTYRASGAGGQHVNKTESAVR 218


>gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1]
 gi|254790894|sp|C0QTI3|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1]
          Length = 361

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/346 (38%), Positives = 192/346 (55%), Gaps = 10/346 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +N  ++L  L     DP + ++  + + + +E +  +      KE +  L D    
Sbjct: 7   LQKLENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEET 66

Query: 73  LELALEEDDCSIL--QETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129
             L    D+   L  +E   NL + K E+E + Q E L     D  +  LE+  GAGG E
Sbjct: 67  KSLLNNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGEE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE++ +K E L +H  +  GIK    LIKG  AY  LK E GVHR
Sbjct: 127 AALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S+ R HTS +++ V P  ++ ++IEI   + +I+T RASGAGGQHVNTTDSA
Sbjct: 187 VQRVPETESSGRIHTSTATVAVLPEAEE-VDIEIKPEELKIETMRASGAGGQHVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+VV CQ ERSQ +N+A+A  +LRA+L   +   R E   I +  + ++G G
Sbjct: 246 VRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLK--DYYDRLEREKIEKERRMQVGTG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N       D+LDGDLD+ +   +A
Sbjct: 304 DRSEKIRTYNF-PQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIA 348


>gi|313672261|ref|YP_004050372.1| bacterial peptide chain release factor 1 (brf-1) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 356

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/357 (38%), Positives = 204/357 (57%), Gaps = 30/357 (8%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS----------FIKE 61
           +FD  +  +++ + L  K  DP++  ++   + L +E   L   +            IKE
Sbjct: 1   MFDHLEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSIKE 60

Query: 62  IQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            +  L D  +  L+ELA  E     L E  + L++I  E+   +   L     D  + Y+
Sbjct: 61  AEAILKDGGDKDLIELAEIE-----LAEGKEKLEKISEEL---KILLLPKDPFDEKNIYI 112

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG GG ES  +A  LLRMY R+AEK  +KTE ++ ++    G K   LL+KG NAY 
Sbjct: 113 EIRAGTGGEESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYS 172

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E G HR+ RI   +S+ R HTS  ++ V P  DD +++ I   D RID YR+SGAG
Sbjct: 173 KLKYEAGGHRVQRIPETESSGRIHTSACTVAVIPEADD-VDVHIDPKDLRIDVYRSSGAG 231

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANI 298
           GQHVNTTDSAVRITHIPTG+VV CQ ERSQ KNK +A  +L++K++E+EL++ R E A  
Sbjct: 232 GQHVNTTDSAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQA-- 289

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            E+ K ++G G    +IR+Y   P   + D R N+   +   V++G+LD+ + A + 
Sbjct: 290 -ENRKQQVGSGDRSERIRTYNF-PQNRLTDHRINLTVYNLDMVMEGELDEIIDALIT 344


>gi|302671177|ref|YP_003831137.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
 gi|302395650|gb|ADL34555.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
          Length = 357

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 203/350 (58%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +++   +  +  DP +  +    + LM+E+++L+  +    E +   C   I
Sbjct: 1   MFDKIEDILRKFEDITMELNDPSVIADQERFRKLMKEQKNLEPLVECYNEYKK--CKETI 58

Query: 72  LLELAL--EEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGA 125
              LA+  EE D  + +   D LQ  K ++ E +    +L    D ND     +E+ AG 
Sbjct: 59  DESLAMLDEESDPEMKEMLKDELQTAKDKIPELEDKLKILLLPKDPNDDKNVIVEIRAGV 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  + R+YTR+AE++ ++ E + + D    GIK+ + +IKG  AY  LK E 
Sbjct: 119 GGDEAALFAADMYRVYTRYAERQNWRVETMSVEDIGIGGIKTVSFMIKGNGAYSRLKFES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ RI   +S  R HTS  ++ + P V+D +E+EI  +DC+ D +RASG GGQ VNT
Sbjct: 179 GVHRVQRIPATESGGRIHTSAITVAIMPEVED-VEVEIDMNDCKFDVFRASGNGGQCVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH PTG+V+ CQ E+SQ +NKA+A  +LRAKLYELE +K+    N  E  +++
Sbjct: 238 TDSAVRLTHFPTGIVISCQDEKSQQQNKAKALRVLRAKLYELEQEKKHN--NEAELRRSQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G G    +IR+Y     + V D R  +       ++DGD+D+ + + +A
Sbjct: 296 VGSGDRSEKIRTYNFHQGR-VTDHRIGLTLYKIDQIMDGDIDEIIDSLIA 344


>gi|294341235|emb|CAZ89636.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As]
          Length = 358

 Score =  209 bits (531), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 109/240 (45%), Positives = 155/240 (64%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + ++E+ AG GG ES  +A  LLRMY R+AE++++ TE +     +  G K   L +
Sbjct: 107 DSRNVFVEIRAGTGGEESALFAADLLRMYARYAERKRWTTEVISESPSDLGGYKEVILRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   ++  R HTS +++ V P VD++  I+I+ SD RIDT
Sbjct: 167 AGEGAYGLLKYESGGHRVQRVPKTETQGRIHTSAATVAVMPEVDEAQAIQINPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSA+RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R
Sbjct: 227 FRASGAGGQHINKTDSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQAR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    + K+ +G G    +IR+Y   P   V + R N+       +LDGDLD+ + A
Sbjct: 287 Q--AEEAATRKSLVGSGDRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTA 343


>gi|251778025|ref|ZP_04820945.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243082340|gb|EES48230.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 360

 Score =  209 bits (531), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 197/335 (58%), Gaps = 13/335 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD---C 82
           L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +E D    
Sbjct: 16  LSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSDESDREMK 75

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L E   +L   ++E+E K+ + LL      D  + ++E+  GAGG E+  +A  L RM
Sbjct: 76  EMLNEEISSLSEREIELE-KEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFAYNLFRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+   +S+ 
Sbjct: 135 YTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P VDD +EIEI++ D RID +RASG GGQ VNTTDSAVRITH+P+G+V
Sbjct: 195 RIHTSTVTVAVLPEVDD-VEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITHLPSGLV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ E+SQ KNK +A  +LR++L+E   Q+R +   I    K+++G G    +IR+Y  
Sbjct: 254 VSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSERIRTYNY 311

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   + D R  +        LDG++ + + A + 
Sbjct: 312 -PQGRITDHRIGLTLYKLDSFLDGEVQEMINALIT 345


>gi|298245470|ref|ZP_06969276.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
 gi|297552951|gb|EFH86816.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
          Length = 358

 Score =  208 bits (530), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 160/244 (65%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A + +  GAGG E+  +A  L RMY+R+A+ R++K E L+ +D E+ G K  T +I
Sbjct: 107 DEKNAVVTIQGGAGGDEAALFAADLFRMYSRYADGRRWKIEILDGNDTEQGGFKDITFVI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  +K E G HR+ R+   ++N R HTS + + V P  DD I+IE+ ++D R+D 
Sbjct: 167 RGKGAYSRMKYEGGTHRVQRVPSTEANGRIHTSTAKVIVLPEADDDIQIEVKDADIRVDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A N+L+++L++LE  KR
Sbjct: 227 YRSTGHGGQSVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKQKALNVLKSRLWDLEEAKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +G++ ++++  G    +IR+Y   P   V D R  + + +   +LDG LD+F+  
Sbjct: 287 QE--ELGKARRSQVQTGDRSEKIRTYNF-PQDRVTDHRIGLTRHNLPGILDGSLDEFIDN 343

Query: 350 TLAI 353
            + +
Sbjct: 344 LITV 347


>gi|91205113|ref|YP_537468.1| peptide chain release factor 1 [Rickettsia bellii RML369-C]
 gi|119361596|sp|Q1RJT5|RF1_RICBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91068657|gb|ABE04379.1| Peptide chain release factor RF-1 [Rickettsia bellii RML369-C]
          Length = 357

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/246 (46%), Positives = 160/246 (65%), Gaps = 9/246 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EADS  A +E+ AG GG E+  +A  L  MY R+AE + ++ E L I +    G K  + 
Sbjct: 107 EADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSA 166

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P V+D ++I++ E D RI
Sbjct: 167 SIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVED-VDIKLEEKDLRI 225

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYRASGAGGQHVNTTDSAVRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +
Sbjct: 226 DTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR 285

Query: 291 KR-EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           K+ +E AN   + + +IG G    +IR+Y   P   V D R N+      +V++G LD+F
Sbjct: 286 KKDQERAN---NRRKQIGSGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQLDEF 341

Query: 347 MKATLA 352
           ++A +A
Sbjct: 342 IEALIA 347


>gi|157827554|ref|YP_001496618.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
 gi|166223596|sp|A8GXI1|RF1_RICB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157802858|gb|ABV79581.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
          Length = 357

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 116/250 (46%), Positives = 161/250 (64%), Gaps = 9/250 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   EADS  A +E+ AG GG E+  +A  L  MY R+AE + ++ E L I +    G K
Sbjct: 103 LPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYK 162

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             +  IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P V+D ++I++ E 
Sbjct: 163 EVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVED-VDIKLEEK 221

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE
Sbjct: 222 DLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYE 281

Query: 287 LELQKR-EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            E +K+ +E AN   + + +IG G    +IR+Y   P   V D R N+      +V++G 
Sbjct: 282 EERRKKDQERAN---NRREQIGSGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQ 337

Query: 343 LDDFMKATLA 352
           LD+F++A +A
Sbjct: 338 LDEFIEALIA 347


>gi|188590258|ref|YP_001919883.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|238689644|sp|B2UZI5|RF1_CLOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188500539|gb|ACD53675.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 360

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 197/335 (58%), Gaps = 13/335 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD---C 82
           L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +E D    
Sbjct: 16  LSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSDESDREMK 75

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L E   +L   ++E+E K+ + LL      D  + ++E+  GAGG E+  +A  L RM
Sbjct: 76  EMLNEEISSLAEREIELE-KEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFAYNLFRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+   +S+ 
Sbjct: 135 YTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P VDD +EIEI++ D RID +RASG GGQ VNTTDSAVRITH+P+G+V
Sbjct: 195 RIHTSTVTVAVLPEVDD-VEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITHLPSGLV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ E+SQ KNK +A  +LR++L+E   Q+R +   I    K+++G G    +IR+Y  
Sbjct: 254 VSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSERIRTYNY 311

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   + D R  +        LDG++ + + A + 
Sbjct: 312 -PQGRITDHRIGLTLYKLDSFLDGEVQEMINALIT 345


>gi|332295519|ref|YP_004437442.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
 gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
          Length = 361

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 183/309 (59%), Gaps = 19/309 (6%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           E   L N +S +KE+++   + +     AL E++  ++++  +NL       E K    +
Sbjct: 55  ELNKLKNYLSDLKELKNSEDEEI----KALAEEEFQVVEKNIENL-------ESKLLNFI 103

Query: 108 LSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L  +  D  +  LE+ AGAGG E+  +A+ LLRMY R+AE++  KTE L I++    GIK
Sbjct: 104 LPKDPLDEKNIILEIRAGAGGEEAALFASELLRMYLRYAERKNAKTEILSINETGIGGIK 163

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A + IKG   Y  LK E G HR+ R+   +S  R HTS +++ V P  D+ I+I I E 
Sbjct: 164 EAIISIKGKRIYSRLKFESGTHRVQRVPETESGGRIHTSTATVAVLPEADE-IDITIDEK 222

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +IDT+RA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ +NK +A  +L AK+  
Sbjct: 223 DLKIDTFRAGGAGGQHVNKTDSAVRITHLPTGIVVACQDERSQFQNKEKAMRILAAKI-- 280

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           LE ++      I  S + ++G G    +IR+Y   P   V D R N+     ++VLDGDL
Sbjct: 281 LEEKRVASEKEIAMSRRIQVGSGDRSEKIRTYNF-PQGRVTDHRINLTLYRLNEVLDGDL 339

Query: 344 DDFMKATLA 352
           D+ + A +A
Sbjct: 340 DEIIDALIA 348


>gi|254504878|ref|ZP_05117029.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
 gi|222440949|gb|EEE47628.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
          Length = 357

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/270 (44%), Positives = 170/270 (62%), Gaps = 13/270 (4%)

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E S+N++R+  +V   +   L   EAD+NDA LEV AG GG E+  +A  L RMY R+AE
Sbjct: 83  ELSENVERLTQDV---RIGLLPKDEADTNDAILEVRAGTGGDEAALFAGDLFRMYQRYAE 139

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            R +K E L   +GE  G K     + G N +  LK E GVHR+ R+   +S  R HTS 
Sbjct: 140 LRGWKVEILSASEGEVGGFKEVIASVSGENVFARLKFESGVHRVQRVPATESGGRIHTSA 199

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P  ++ ++I++ +SD RIDT+RASGAGGQHVNTTDSAVRITHIPTG+VV  Q E
Sbjct: 200 ATVAVLPQAEN-VDIDVQDSDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGIVVAVQDE 258

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQM 322
           RSQHKNKA+A  +LRA++Y+   ++RE  A+   E+ + ++G G    +IR+Y   P   
Sbjct: 259 RSQHKNKARAMQLLRARIYD---EERERAASERTEARRLQVGSGDRSERIRTYNF-PQGR 314

Query: 323 VKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           V D R  +       ++ G+ LD+ ++A +
Sbjct: 315 VTDHRIGLTLYKLDQIIAGESLDEVIEALI 344


>gi|23010857|ref|ZP_00051405.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 94/111 (84%), Positives = 104/111 (93%)

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI ESDCRIDTYR+SGAGGQHVNTT
Sbjct: 1   MHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKESDCRIDTYRSSGAGGQHVNTT 60

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           DSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE A 
Sbjct: 61  DSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKAT 111


>gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
 gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
          Length = 360

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/288 (42%), Positives = 175/288 (60%), Gaps = 16/288 (5%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAY 118
           E   ++ D+L + ELA +E     L+E      +I+ E   ++ + LL      D  D +
Sbjct: 63  ETAKKMLDDLEMRELAQDE-----LKEA-----KIRSEALEQKLQVLLLPQDPDDERDCF 112

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+ AG GG E+  +A  + RMY+R+AE R++K E + I++GE+ G K     I G   Y
Sbjct: 113 LEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVY 172

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G LK E G HR+ R+   +S  R HTS  ++ V PV+ ++  +EIS++D RIDT+R+SGA
Sbjct: 173 GQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGA 232

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E E QKR++    
Sbjct: 233 GGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQ-- 290

Query: 299 GESSKTEIGWG-RQIRSYVLQ-PYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +  +G G R  RS     P   V D R N+      +V++G LD
Sbjct: 291 ASERRNLLGSGDRSDRSRTYNFPQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|325278151|ref|ZP_08143660.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096726|gb|EGB95063.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 157

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/154 (64%), Positives = 121/154 (78%), Gaps = 1/154 (0%)

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH+PT
Sbjct: 1   SGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 60

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
             VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL
Sbjct: 61  NTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVL 120

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 121 DDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 153


>gi|30692917|ref|NP_198466.2| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 391

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/246 (42%), Positives = 158/246 (64%), Gaps = 3/246 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q ++ L +K  D   W +  +A+  +     L + +  + E +  + D   +++L  E D
Sbjct: 109 QEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 168

Query: 81  --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S+L+E    ++ +   ++  +   LLSG  D   A + + AGAGGT++QDWA+MLL
Sbjct: 169 STDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 228

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++ GE+G HR+VR SP++S
Sbjct: 229 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 288

Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              R TSFS + V P++ ++++ IEI E D  I   RA G GGQ+VN  ++AVRITHIPT
Sbjct: 289 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 348

Query: 258 GVVVQC 263
           GV V+C
Sbjct: 349 GVAVRC 354


>gi|296137058|ref|YP_003644300.1| peptide chain release factor 1 [Thiomonas intermedia K12]
 gi|295797180|gb|ADG31970.1| peptide chain release factor 1 [Thiomonas intermedia K12]
          Length = 358

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/240 (45%), Positives = 155/240 (64%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + ++E+ AG GG ES  +A  LLRMY R+AE++++ TE +     +  G K   L +
Sbjct: 107 DSRNVFVEIRAGTGGEESALFAADLLRMYARYAERKRWATEVISESPSDLGGYKEVILRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   ++  R HTS +++ V P +D++  I+I+ SD RIDT
Sbjct: 167 AGEGAYGLLKYESGGHRVQRVPKTETQGRIHTSAATVAVMPEMDEAQAIQINPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSA+RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R
Sbjct: 227 FRASGAGGQHINKTDSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQSR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    + K+ +G G    +IR+Y   P   V + R N+       +LDGDLD+ + A
Sbjct: 287 Q--AEEAATRKSLVGSGDRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTA 343


>gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
 gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
          Length = 342

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 154/237 (64%), Gaps = 7/237 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            + A +E+  GAGG E+  +A  L RMYTR+AE++ +  E  EIH+ +  GI+     +K
Sbjct: 85  GDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVK 144

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG LK E GVHR+ RI   +S  R HTS +++ V P +++  +IEI   D +I+T+
Sbjct: 145 GKNAYGILKYESGVHRVQRIPVTESGGRIHTSTATVAVLPEIEEK-DIEIRPEDLKIETF 203

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERSQ++N+  A  +LRA+LY+L+ +++E
Sbjct: 204 RASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNRQTALRILRARLYQLQKEQKE 263

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               I +  K++IG G    +IR+Y   P   V D R N       ++LDGDLD+ +
Sbjct: 264 R--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQEILDGDLDEII 317


>gi|18311184|ref|NP_563118.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110799590|ref|YP_696880.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110802815|ref|YP_699476.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|168205561|ref|ZP_02631566.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|168210131|ref|ZP_02635756.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|168213694|ref|ZP_02639319.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|168215831|ref|ZP_02641456.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
 gi|169344167|ref|ZP_02865149.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|182624062|ref|ZP_02951850.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|20139327|sp|Q8XIB9|RF1_CLOPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361525|sp|Q0TNB0|RF1_CLOP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361526|sp|Q0SQY1|RF1_CLOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|18145867|dbj|BAB81908.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110674237|gb|ABG83224.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110683316|gb|ABG86686.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|169297625|gb|EDS79725.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|170662868|gb|EDT15551.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|170711762|gb|EDT23944.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|170714864|gb|EDT27046.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|177910955|gb|EDT73309.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|182382220|gb|EDT79699.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
          Length = 360

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/346 (37%), Positives = 194/346 (56%), Gaps = 18/346 (5%)

Query: 20  VQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + RL+F       L+ K  DP +  N  E + L +E   L+  ++  KE ++   +    
Sbjct: 3   LDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEAN 62

Query: 73  LELALEEDDCS----ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            E+  EE D      I  E  D  +R K   +  Q   L     D  + ++E+  GAGG 
Sbjct: 63  KEMLSEESDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYT++AEK ++K E +  ++ +  G K    +IKG  AY  LK E G H
Sbjct: 123 EAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESGAH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD +EIEI++ D +ID +RASG GGQ VNTTDS
Sbjct: 183 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VEIEINDKDIKIDVFRASGNGGQCVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VV CQ E+SQ KNK +A  +LRA+L+  E  + E +A I E  K+++G 
Sbjct: 242 AVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVGT 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+        L+GD+D+ + A +
Sbjct: 300 GDRSERIRTYNY-PQGRVTDHRINMTLYKLDSFLEGDIDEILNALI 344


>gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 360

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/243 (45%), Positives = 151/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+  G GG E+  +A  L RMY R+AE+  +KTE L IH  +  G+K    LI
Sbjct: 110 DEKNVILEIRQGTGGEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGGVKEVIALI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +S+ R HTS +++ V P  ++ ++IEI   D +I+T
Sbjct: 170 KGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAEE-VDIEIKPEDLKIET 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA GAGGQHVNTTDSAVRITH+PTG+VVQCQ ERSQ +NK +A  +LRA+L   +   R
Sbjct: 229 MRAGGAGGQHVNTTDSAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLK--DYYDR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E   I +  K ++G G    +IR+Y   P   V D R N      +D+LDGDLD+ ++ 
Sbjct: 287 LEREKIAKERKEQVGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDILDGDLDEIIEV 345

Query: 350 TLA 352
            +A
Sbjct: 346 LIA 348


>gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1]
 gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga
           petrophila RKU-1]
          Length = 342

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 106/237 (44%), Positives = 154/237 (64%), Gaps = 7/237 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            + A +E+  GAGG E+  +A  L RMYTR+AE++ +  E  EIH+ +  GI+     +K
Sbjct: 85  GDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVK 144

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G NAYG LK E GVHR+ R+   +S  R HTS +++ V P +++  +IEI   D +I+T+
Sbjct: 145 GKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEK-DIEIRPEDLKIETF 203

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ++NK  A  +LRA+LY+L+ +++E
Sbjct: 204 RASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKE 263

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               I +  K++IG G    +IR+Y   P   V D R N       ++LDGDLD+ +
Sbjct: 264 R--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQEILDGDLDEII 317


>gi|302036343|ref|YP_003796665.1| peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
 gi|300604407|emb|CBK40739.1| Peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
          Length = 386

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/348 (39%), Positives = 197/348 (56%), Gaps = 18/348 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK--EIQDRLCDNLIL 72
           W+    R   L  +  DP +         L +ER  L+  A+ FI   E + +L D   L
Sbjct: 35  WEGMAARFQELTNQLMDPSVLNQPGMIHKLNKERTELEEPALQFIAYCEAKKQLEDVSAL 94

Query: 73  LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           L+ A    D   +  E SD+LQ+  LE+E++  + L   +  D  + +LE+ AG GG E+
Sbjct: 95  LQDASTGADMKQLFAEESDHLQQQVLEIEHRAKDFLTPKDPRDEKNMFLEIRAGTGGDEA 154

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI---KSATLLIKGPNAYGWLKGEQGV 187
             +A  L RMY ++AE+ + K   LE+ D  E GI   +    L++G  AYG L+ E GV
Sbjct: 155 ALFAGDLFRMYLKYAERNRLK---LEVVDASETGIGGYREVIALLEGKGAYGRLRYESGV 211

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS  ++ V P VD+ +E+ I   D RIDT+ +SGAGGQ VNTT 
Sbjct: 212 HRVQRVPTTEASGRIHTSTVTVAVMPEVDE-VEVHIDPKDLRIDTFCSSGAGGQSVNTTY 270

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGVVV CQ ERSQ KN+ +A   LRA++ E E +K+E  A I ++ K+++G
Sbjct: 271 SAVRITHIPTGVVVSCQDERSQLKNRTKAMRNLRARIVEAEREKQE--AEIAQNRKSQVG 328

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R  +       VL GDL++ ++A  A
Sbjct: 329 TGDRSEKIRTYNF-PQNRVTDHRIGLTVHKLDQVLAGDLEEIVQALRA 375


>gi|256545370|ref|ZP_05472733.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
 gi|256398931|gb|EEU12545.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
          Length = 357

 Score =  207 bits (526), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/335 (37%), Positives = 198/335 (59%), Gaps = 13/335 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELALEEDDC 82
           L  K  DP +  +    K + RE   L   +   + I+  +D + +N  LL+ A +++  
Sbjct: 15  LEKKLADPEVLSDTERFKKVSREYNQLKPIVEKYNQIRSAEDMINENTELLKEADDKEMI 74

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L+   D  ++  LE   +  + LL  +   D  D  +E+ AGAGG E+  +A  L RM
Sbjct: 75  DLLKSEIDENKK-NLEKYNEDLKVLLIPTDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y  +A+K+K+KTE +++      G+K AT +++G  AY  LK E GVHR+ R+   +S  
Sbjct: 134 YHMYADKQKYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P  D+ ++I+I  +D R D YR+SG GGQ VNTTDSAVR+THIPTG+V
Sbjct: 194 RIHTSTATVAVLPEADE-VDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ E+SQ KNK +A  +LRA+LYE+E QKR++   I ++ K+++G G    +IR+Y  
Sbjct: 253 VTCQDEKSQIKNKDKAMRVLRARLYEIEEQKRQK--EISDNRKSQVGTGDRSERIRTYNY 310

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   + D R N       D LDG++++ +++ + 
Sbjct: 311 -PQGRITDHRINKTIYQLDDFLDGNIEEMIESLIT 344


>gi|224531646|ref|ZP_03672278.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
 gi|224511111|gb|EEF81517.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
          Length = 357

 Score =  207 bits (526), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/341 (38%), Positives = 200/341 (58%), Gaps = 15/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71
            ++A  ++  L  K +D +L +N  E   +++E  HL+      I + K I  ++ DN  
Sbjct: 6   LNSATSKIKSLEEKLQDINLIKNQKEYSKIIKEYTHLEKINTKKIEYEK-ILSQINDNKT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           +LE   +++   ++++   +L + K ++E+ Q + LL    E DS +  +E+ AG GG E
Sbjct: 65  ILEKEEQQEMKELIKQELIDLDKKKEDIEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR
Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN R  TS +++ V P ++++      + D RID YR+SGAGGQHVNTTDSA
Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEETEIEINEK-DLRIDVYRSSGAGGQHVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G
Sbjct: 243 VRITHLPTRIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               +IR+Y   P   + D R NI      + + G+LD  +
Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340


>gi|289450407|ref|YP_003475653.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184954|gb|ADC91379.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 366

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 193/337 (57%), Gaps = 13/337 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            +  + R   L+    DP L  +      +++E+  L   +  I++    +D L +NL +
Sbjct: 6   LEAVLNRYEELSAGLSDPSLLADRDRYLRVVKEQAGLTEIVGVIRDYIAKKDELAENLAM 65

Query: 73  LELALEEDDCSILQETSDNLQRIKL-EVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130
           L+   +E+   +L+E   +L ++KL E+E K Q   L     D  + YLE+  GAGG E+
Sbjct: 66  LQETDDEEMRLLLKEEIRDL-KVKLPELEEKLQILLLPKDPRDEKNVYLEIRGGAGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L RMY  +AE + FK E +E +  E  G+K     I+G  AY   K E GVHR+
Sbjct: 125 ALFAEVLFRMYQSYAESKHFKVEIVEWNATELGGLKEVVCSIQGSGAYSLFKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P VD+ +++EI   D  IDTYR+SGAGGQHVN TDSA+
Sbjct: 185 QRVPVTESGGRIHTSTVTVAVLPEVDE-VDVEILPGDITIDTYRSSGAGGQHVNKTDSAI 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV CQ +RSQ+KNK +A  +LRAKLYE   ++R    +I E+ + ++G G 
Sbjct: 244 RITHIPTGIVVTCQDQRSQYKNKDRAMAVLRAKLYERAQEER--AGSIAEARRDQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
              +IR+Y   P   V D R  +      ++L G+LD
Sbjct: 302 RSERIRTYNY-PQGRVTDHRIGLTVYKIDEILAGNLD 337


>gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
 gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
          Length = 362

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/338 (36%), Positives = 192/338 (56%), Gaps = 11/338 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   ++ V+R   +     DP +  +  + + L +E   L+      +  Q +  ++ + 
Sbjct: 6   LVKLESLVERYEEVQHLLGDPAVIGDQNKFRSLSKEYSQLEEVTKCFQAYQ-QAQEDFVA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E   +EDD  + +   D ++  K E+E    E  +L    D ND    +LE+ AGAGG 
Sbjct: 65  AEEMTKEDDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKR--AAEISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           G    +IR+Y   P   V D R N+     ++V++GDL
Sbjct: 303 GDRSDRIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDL 339


>gi|74318511|ref|YP_316251.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
 gi|119361634|sp|Q3SG10|RF1_THIDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74058006|gb|AAZ98446.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
          Length = 360

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 193/339 (56%), Gaps = 9/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A +RL  L+     P +  ++   + L RE   L   +   ++ +    D     E+  +
Sbjct: 12  ADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEADQKTAQEMLAD 71

Query: 79  EDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136
            D   + + E +D   RI  E+E +   +LL  +  D  + +LE+ AG GG ES  +A  
Sbjct: 72  ADMRELAEAELADGAARIT-ELENELQTALLPRDPNDERNIFLEIRAGTGGDESALFAGN 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMYTR+AE++++K E +    GE  G K   + I G  AY  LK E G HR+ R+   
Sbjct: 131 LLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLKFESGGHRVQRVPET 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ V P   +  E++I+ +D RIDT+RASGAGGQH+N TDSAVRITH+P
Sbjct: 191 ESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ +RSQH+N+AQA ++L A+L + E+Q ++  A+   + K+ IG G    +IR
Sbjct: 251 TGLVVECQDDRSQHRNRAQAMSVLAARLKDREIQAQQ--ASEASTRKSLIGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       V+DGDL + + A  A
Sbjct: 309 TYNF-PQGRITDHRINLTLYKIDAVMDGDLGELLDALAA 346


>gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1]
 gi|166223590|sp|A5VYG5|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           putida F1]
          Length = 360

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130
           ++L+++  +L+ + LE   +  E LL+ EA         D ND    +LE+ AG GG E+
Sbjct: 67  ALLKDSDPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +    I    K  +G G 
Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|260890431|ref|ZP_05901694.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
 gi|260860051|gb|EEX74551.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
          Length = 360

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 156/243 (64%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LI
Sbjct: 106 DDKNVIMEIRAGAGGDEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +S+ R HTS  ++ V P +DD  E+EI+ SD +IDT
Sbjct: 166 KGNGAYSRLKFESGVHRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K+
Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    ++++G G    +IR+Y   P   V D R  +       VLDGDLD+ + A
Sbjct: 286 R--SAVENERRSQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDA 342

Query: 350 TLA 352
            +A
Sbjct: 343 LIA 345


>gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238054477|sp|B3CL87|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 160/250 (64%), Gaps = 8/250 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E DS +A LE+ AG GG E+  +A ML RMY ++AE+R +K E + I +    G K
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+ LI G   +  LK E GVHR+ R+   +S+ R HTS +++ + P V++ ++ EI E 
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFEIEEK 221

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YR+SG GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE
Sbjct: 222 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYE 281

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD 342
           +E QK+E         K++IG G    +IR+Y   P   + D R N+       ++ +G+
Sbjct: 282 IERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGE 338

Query: 343 LDDFMKATLA 352
           LD+F++A ++
Sbjct: 339 LDEFIEALIS 348


>gi|189182919|ref|YP_001936704.1| peptide chain release factor 1 [Orientia tsutsugamushi str. Ikeda]
 gi|238692229|sp|B3CQD1|RF1_ORITI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189179690|dbj|BAG39470.1| peptide chain release factor RF-1 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 359

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/257 (47%), Positives = 166/257 (64%), Gaps = 11/257 (4%)

Query: 96  KLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           KLE E K   SLL  E+D + +A +EV AG GG E+  +A  L +MY R+AE++K+K E 
Sbjct: 90  KLEEEVKI--SLLPKESDDHKNAIIEVRAGTGGDEAALFAASLFQMYNRYAERKKWKFEL 147

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L I D E  G K A+ LI G   +  LK E GVHR+ RI   +SN R HTS +++ V P 
Sbjct: 148 LSISDTEIGGYKEASALISGNGVFANLKFESGVHRVQRIPKTESNGRIHTSAATVVVLPE 207

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            ++ ++++I   D +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVV  Q E+SQHKNKA
Sbjct: 208 AEE-VDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVSQQDEKSQHKNKA 266

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +L A+LY+LE QK ++   +  S K ++G G    +IR+Y   P   V D R N+ 
Sbjct: 267 KAMKILYARLYDLEKQKSQQEQAM--SRKVQVGTGDRSERIRTYNY-PQGRVTDHRINLT 323

Query: 332 KTSPSDVL-DGDLDDFM 347
                +++ +G LD+ +
Sbjct: 324 LYKIEEIIQEGKLDEII 340


>gi|257126615|ref|YP_003164729.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
 gi|257050554|gb|ACV39738.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
          Length = 360

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 156/243 (64%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LI
Sbjct: 106 DDKNVIMEIRAGAGGDEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +S+ R HTS  ++ V P +DD  E+EI+ SD +IDT
Sbjct: 166 KGHGAYSRLKFESGVHRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K+
Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    ++++G G    +IR+Y   P   V D R  +       VLDGDLD+ + A
Sbjct: 286 R--SAVESERRSQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDA 342

Query: 350 TLA 352
            +A
Sbjct: 343 LIA 345


>gi|297181249|gb|ADI17443.1| protein chain release factor a [uncultured Rhodospirillales
           bacterium HF0070_31K06]
          Length = 357

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/245 (46%), Positives = 156/245 (63%), Gaps = 8/245 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +A+ L+RMY R+AE   ++TE L++ + E  G+K A L 
Sbjct: 106 ADEKSAILEIRAGTGGDEAALFASDLMRMYQRYAEMHGWRTEFLDLSETELGGVKEAALS 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   DS  R HTS +++ V P  ++ ++I+I  SD R+D
Sbjct: 166 IAGRGVFARLKFESGVHRVQRVPTTDSGGRIHTSAATVAVLPEAEE-VDIQIDTSDLRVD 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQHVN TDSA+RITH+PTG+VVQCQ E+SQHKN+A+A  +LRA+LY+ E Q 
Sbjct: 225 TYRASGAGGQHVNKTDSAIRITHLPTGIVVQCQDEKSQHKNRAKAMKVLRARLYDHERQT 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
            +  A      KT++G G    +IR+Y   P   V D R N+       +L GD LD+ +
Sbjct: 285 LD--AERAADRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLDRILAGDELDEVV 341

Query: 348 KATLA 352
              +A
Sbjct: 342 DLLIA 346


>gi|237807596|ref|YP_002892036.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
 gi|259585258|sp|C4LBL5|RF1_TOLAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237499857|gb|ACQ92450.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
          Length = 362

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 185/325 (56%), Gaps = 13/325 (4%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84
           +P++  +  + + L RE   L   ++  ++ Q    D L  +E  L  DD  +       
Sbjct: 25  EPNVVSDQDKFRALTREYSQLGEVVAGFQQYQQAEAD-LQAIEEMLSGDDAEMKAMAQEE 83

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L E    ++R++ E+   Q   L     D ++ +LE+ AGAGG E+  +A  L RMY+++
Sbjct: 84  LAEAKQLIERVEAEL---QVLLLPKDPKDDSNCFLEIRAGAGGDEAAIFAGDLFRMYSKY 140

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           +E+R ++ E +   DGE  G K   + ++G + YG +K E G HR+ R+   +S  R HT
Sbjct: 141 SERRGWRMEIMSTSDGEHGGYKEIIVRMEGDSVYGIMKFESGGHRVQRVPETESQGRVHT 200

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ V P + +    EI+ +D RIDT+RASGAGGQH+N TDSA+RITHIPTG VV+CQ
Sbjct: 201 SACTVMVLPEIPEKEIPEINPADLRIDTFRASGAGGQHINKTDSAIRITHIPTGTVVECQ 260

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323
            ERSQHKNKA+A ++L A+L + E  KR   A+    S    G    +IR+Y   P   V
Sbjct: 261 DERSQHKNKARAMSVLAARLAQQEEDKRRAEADSTRRSILSTGDRSDRIRTYNY-PQGRV 319

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMK 348
            D R N+     S+V++GDLD  +K
Sbjct: 320 SDHRINLTLYRLSEVMEGDLDSLLK 344


>gi|157828568|ref|YP_001494810.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933282|ref|YP_001650071.1| peptide chain release factor 1 [Rickettsia rickettsii str. Iowa]
 gi|166223598|sp|A8GSC7|RF1_RICRS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039987|sp|B0BXT9|RF1_RICRO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157801049|gb|ABV76302.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908369|gb|ABY72665.1| bacterial peptide chain release factor 1 (RF-1) [Rickettsia
           rickettsii str. Iowa]
          Length = 355

 Score =  206 bits (523), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/333 (39%), Positives = 195/333 (58%), Gaps = 22/333 (6%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
           F+    E   L   V + K   + +  L+ A +F  E+     DN  L    + ED+   
Sbjct: 30  FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83

Query: 85  LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG E+  +A +L  MY R
Sbjct: 84  LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+ R+   +S  R H
Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  
Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQHKNKA+A  +LRA++YE E +K+E+     +S + ++G G    +IR+Y   P 
Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKEQAR--ADSRRGQVGSGDRSERIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             V D R ++      +V+ +G LD+F++A +A
Sbjct: 313 GRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|148284270|ref|YP_001248360.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
 gi|166223581|sp|A5CCS8|RF1_ORITB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146739709|emb|CAM79522.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
          Length = 359

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/257 (47%), Positives = 166/257 (64%), Gaps = 11/257 (4%)

Query: 96  KLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           KLE E K   SLL  E+D + +A +EV AG GG E+  +A  L +MY ++AE++K+K E 
Sbjct: 90  KLEEEVKI--SLLPKESDDHKNAIIEVRAGTGGDEAALFAASLFQMYNKYAERKKWKFEL 147

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L I D E  G K A+ LI G   +  LK E GVHR+ RI   +SN R HTS +++ V P 
Sbjct: 148 LSISDTEIGGCKEASALISGNGVFANLKFESGVHRVQRIPKTESNGRIHTSAATVVVLPE 207

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            ++ ++++I   D +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVV  Q E+SQHKNKA
Sbjct: 208 AEE-VDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVSQQDEKSQHKNKA 266

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +L A+LY+LE QK ++   I  S K ++G G    +IR+Y   P   V D R N+ 
Sbjct: 267 KAMKILYARLYDLEKQKSKQEQAI--SRKVQVGTGDRSERIRTYNY-PQGRVTDHRINLT 323

Query: 332 KTSPSDVL-DGDLDDFM 347
                +++ +G LD+ +
Sbjct: 324 LYKIEEIIQEGKLDEII 340


>gi|270289542|ref|ZP_06195844.1| peptide chain release factor 2 [Chlamydia muridarum Weiss]
          Length = 182

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 120/164 (73%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           ++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEK 164


>gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166223538|sp|A4XJN1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145410112|gb|ABP67116.1| bacterial peptide chain release factor 1 (bRF-1)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 355

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 191/337 (56%), Gaps = 17/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81
           L  K  DP +  N  E + LM+E  +L   +   +E + R+   +     LL+  L+ED 
Sbjct: 15  LEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYK-RIIKTIEEAEELLDTNLDEDF 73

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +++E  +  +  K  VE +    LL  +  D  +  +E+ AGAGG E+  +A  L RM
Sbjct: 74  EKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+   +S  
Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P V+D +E+EI E D  I+T+RA GAGGQHVN T+SAVRITH PTG+V
Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIETFRAGGAGGQHVNKTESAVRITHKPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315
           V CQ ERSQH N+ +A  +LRA+LY+    LQ++E    I    ++++G G    +IR+Y
Sbjct: 253 VSCQDERSQHANRDRAMKILRARLYDYYQSLQQKE----IESQRRSQVGTGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R  +       VLDGDLD+ + A + 
Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALIT 344


>gi|46446286|ref|YP_007651.1| peptide chain release factor 1 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|61214629|sp|Q6MDH3|RF1_PARUW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46399927|emb|CAF23376.1| probable translation releasing factor RF-1 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 359

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 204/343 (59%), Gaps = 16/343 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLELA 76
           ++RL+ +     +PH++ +  + + L +E  +L+N        K+++ +L DN  LL++ 
Sbjct: 10  LERLAEVEEVLGNPHVYDDQKKYRALTQEHAYLNNLKKSWDEKKDLEKQLEDNQELLKI- 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLL--SGEADSNDAYLEVHAGAGGTESQD 132
             E D    +   D++++++  V+  Q   E+LL      D+  + +E+ AG GG E+  
Sbjct: 69  --EKDLEFAEVLKDDIRQLQSRVQELQLLIENLLVPPDPLDNRPSIIELRAGTGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A+++ ++ E L     E  G K   +++ G N Y +++ E G HR+ R
Sbjct: 127 FVGDCVRMYKLFADRKGWRYELLSCTPSEMGGFKEYVMVLSGENVYRFMQYEAGTHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  +I V P  D++ EI++ E D RIDTYR+SGAGGQHVNTTDSAVRI
Sbjct: 187 VPATEAQGRVHTSAITIAVLPEPDENEEIDLDEKDLRIDTYRSSGAGGQHVNTTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV CQ+ERSQHKNK +A  +L+AK+ E+E QK+++   +  +   ++G G   
Sbjct: 247 THVPSGIVVYCQEERSQHKNKDKAMRLLKAKMAEIEQQKKQQ--ELASTRAQQVGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   + D R N+ K +   V++GDL++   A +A
Sbjct: 305 ERIRTYNF-PQNRITDHRINLTKYNLDYVINGDLEEITSALVA 346


>gi|15604386|ref|NP_220902.1| peptide chain release factor 1 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225942|sp|Q9ZD21|RF1_RICPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3861078|emb|CAA14978.1| PEPTIDE CHAIN RELEASE FACTOR 1 (prfA) [Rickettsia prowazekii]
 gi|292572142|gb|ADE30057.1| Peptide chain release factor RF-1 [Rickettsia prowazekii Rp22]
          Length = 355

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/357 (38%), Positives = 201/357 (56%), Gaps = 29/357 (8%)

Query: 8   NCLGGLFDWDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           N +  L  ++N  ++LS       F+    E   L   V++ K   + +  L+ A +F  
Sbjct: 6   NLVKILDKYENLGKKLSSGIIGDEFVKASKEYAELEDVVVKIKQYNKAKSELEEANNF-- 63

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYL 119
                       LE+AL+     ++      L+ +  ++E     SLL   EADS  A +
Sbjct: 64  -----------RLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEADSKSAII 112

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           EV AG+GG E+  +A +L  MY R++E + ++ E L I D    G K A+  IKG + + 
Sbjct: 113 EVRAGSGGEEAALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIKGKDVFS 172

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHR+ RI   +S  R HTS +++ V P  +  I+I+I + D RIDTYRASGAG
Sbjct: 173 KLKFESGVHRVQRIPETESQGRIHTSAATVAVLPEAE-GIDIKIEDKDLRIDTYRASGAG 231

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVNTTDSAVRITHIPTG+ V  Q E+SQHKNKA+A  +LRA+LYE + +++E+     
Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ--ERS 289

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
           +S + ++G G    +IR+Y   P   V D R N+      +V+  G LD+F++A +A
Sbjct: 290 DSRRGQVGSGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345


>gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 362

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/291 (40%), Positives = 174/291 (59%), Gaps = 10/291 (3%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123
           D+L   E    EDD  + +   + ++  K E+E  + E  +L    D ND    +LE+ A
Sbjct: 60  DDLAAAEEMANEDDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  +A  L RMY+R+AE+R ++ E +  +D E  G K     + G  AYG LK 
Sbjct: 120 GAGGDEAGIFAGDLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKF 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ V P + ++   EI+ SD +IDTYR+SGAGGQHV
Sbjct: 180 ESGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A    + +
Sbjct: 240 NTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRR 297

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +G G    +IR+Y   P   V D R  +     ++V++GD+D  ++  L
Sbjct: 298 NLLGSGDRSDRIRTYNY-PQGRVSDHRITLTIYRLNEVMEGDVDCLIQPVL 347


>gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [marine bacterium HP15]
          Length = 362

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 153/235 (65%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY R+AE+R+++ E L   +GE  G K     +
Sbjct: 109 DGKNVFLEIRAGTGGDEAAIFAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P  D++  IE++++D R+DT
Sbjct: 169 AGDGVYGALKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L   E +++
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++  ++ E+ K+ +G G    +IR+Y   P   V D R N+      +V+ GDLD
Sbjct: 289 QK--SMAETRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLD 340


>gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1]
          Length = 360

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130
           ++L+++  +L+ + +E   +  E LL+ EA         D ND    +LE+ AG GG E+
Sbjct: 67  ALLKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +    I    K  +G G 
Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi]
 gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi]
          Length = 357

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 160/250 (64%), Gaps = 8/250 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E DS +A LE+ AG GG E+  +A ML RMY ++AE+R +K E + I +    G K
Sbjct: 101 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 160

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+ LI G   +  LK E GVHR+ R+   +S+ R HTS +++ + P V++ ++ +I E 
Sbjct: 161 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFKIEEK 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YR+SG GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE
Sbjct: 220 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYE 279

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD 342
           +E QK+E         K++IG G    +IR+Y   P   + D R N+       ++ +G+
Sbjct: 280 IERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGE 336

Query: 343 LDDFMKATLA 352
           LD+F++A ++
Sbjct: 337 LDEFIEALIS 346


>gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|81652805|sp|Q73IC2|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 359

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 160/250 (64%), Gaps = 8/250 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E DS +A LE+ AG GG E+  +A ML RMY ++AE+R +K E + I +    G K
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+ LI G   +  LK E GVHR+ R+   +S+ R HTS +++ + P V++ ++ +I E 
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFKIEEK 221

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YR+SG GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE
Sbjct: 222 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYE 281

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD 342
           +E QK+E         K++IG G    +IR+Y   P   + D R N+       ++ +G+
Sbjct: 282 IERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGE 338

Query: 343 LDDFMKATLA 352
           LD+F++A ++
Sbjct: 339 LDEFIEALIS 348


>gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp]
 gi|166223589|sp|A4XR61|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           mendocina ymp]
          Length = 360

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 112/246 (45%), Positives = 153/246 (62%), Gaps = 12/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  ++  L RMY+R+AEK+ ++ E L  ++GE  G K     +
Sbjct: 109 DGRNVYLEVRAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITHIPTG VV+CQ+ERSQHKN+A+A   L AK     LQ +
Sbjct: 229 YRSSGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAK-----LQDQ 283

Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E A    I E+ K  +G G    +IR+Y   P   V D R N+   S S+V+ G ++  
Sbjct: 284 QEAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLSEVMAGGVEAV 342

Query: 347 MKATLA 352
           ++  LA
Sbjct: 343 IEPLLA 348


>gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 105/221 (47%), Positives = 151/221 (68%), Gaps = 5/221 (2%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+    RW  K+++K+  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP+
Sbjct: 7   LVAPTPRWGGKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPF 66

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++   R TSF+ + V P++ ++S+++EI E D  I   RA G GGQ+VN  ++AVR+ HI
Sbjct: 67  NAKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHI 126

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIR 313
           PTG+ V+C +ERSQ  NK +A   L+AKL  + E Q+  EI  I G++ K E  WG+QIR
Sbjct: 127 PTGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIR 184

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +YV  PY++VKD+RT  E +  S V+DG+LD F+KA L  K
Sbjct: 185 NYVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 225


>gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
 gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
          Length = 357

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 113/236 (47%), Positives = 151/236 (63%), Gaps = 9/236 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EADSNDA LEV AG GG E+  +A  L RMY R+AE + +K E L   +GE  G K    
Sbjct: 104 EADSNDAILEVRAGTGGDEAALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVIA 163

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I++ ESD RI
Sbjct: 164 SVSGENVFAKLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAED-VDIDVQESDLRI 222

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYRASGAGGQHVNTTDSAVRITH+PTG+VV  Q ERSQHKNKA+A  +LRA++Y+   +
Sbjct: 223 DTYRASGAGGQHVNTTDSAVRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYD---E 279

Query: 291 KREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +RE  A+   E+ + ++G G    +IR+Y   P   V D R  +       +L G+
Sbjct: 280 ERERAASERTEARRLQVGSGDRSERIRTYNY-PQGRVTDHRIGLTLYKLEQILSGE 334


>gi|291547175|emb|CBL20283.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           SR1/5]
          Length = 358

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/349 (36%), Positives = 207/349 (59%), Gaps = 14/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  D+ + R   L  +  +P +  +    + LM+E+  L   +   KE +   + + D
Sbjct: 1   MFDKLDDLLVRFEELLNELGEPGVTDDPAHFQKLMKEQSDLQPIVDAYKEYKKNKETIED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
           +L +LE   +E+   +L +E SD  +R++ E+E++    LL  +  DS +  +E+  GAG
Sbjct: 61  SLSMLESEKDEEMREMLKEELSDAKKRVE-ELEHELKILLLPKDPNDSKNVIVEIRGGAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  + RMY ++AE R++KTE L +++    G K  T +IKG  AY  LK E G
Sbjct: 120 GDEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIKGEGAYSRLKYESG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ + P  ++ I+  +  ++C+ D +RASG GGQ VNTT
Sbjct: 180 VHRVQRVPETESGGRIHTSTCTVAIMPEAEE-IDFHLDLNECKFDVFRASGNGGQCVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +     E+ +++I
Sbjct: 239 DSAVRLTHIPTGIVISCQDEKSQLKNKDKALRVLRSRLYEMELAKQHDAE--AEARRSQI 296

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V D R  +      ++L+GDLD+ + + +A
Sbjct: 297 GTGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENILNGDLDEIIDSLIA 344


>gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 355

 Score =  205 bits (521), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/336 (38%), Positives = 189/336 (56%), Gaps = 15/336 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDC 82
           L  K  DP +     E + LM+E  +L   +   +E   I + + +   LL+  L+ED  
Sbjct: 15  LEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKKILNTIKEAEELLDTDLDEDFE 74

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +++E  +  +  K  VE +    LL  +  D  +  +E+ AGAGG E+  +A  L RMY
Sbjct: 75  KLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           +R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+   +S  R
Sbjct: 135 SRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P V+D +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H PTG+VV
Sbjct: 195 IHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            CQ ERSQH N+ +A  +LRA+LY+    LQ++E    I    ++++G G    +IR+Y 
Sbjct: 254 TCQDERSQHANRDRAMKILRARLYDYYQSLQQKE----IESQRRSQVGTGDRSERIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             P   V D R  +       VLDGDLD+ + A + 
Sbjct: 310 F-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALIT 344


>gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 360

 Score =  205 bits (521), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 112/243 (46%), Positives = 151/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+  GAGG E+  +A  L RMY R+AE+  +KTE L +H  E+ GIK    LI
Sbjct: 110 DERNVILEIRQGAGGDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +S+ R HTS  ++ V P  ++ ++IEI   + RI+T
Sbjct: 170 KGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTVTVAVLPEAEE-VDIEIKPEELRIET 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA GAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ +NK +A  +LRA+L   +  +R
Sbjct: 229 MRAGGAGGQHVNTTDSAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLK--DYYER 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E   I +  K ++G G    +IR+Y   P   V D R N      +D++DGDLD+ +  
Sbjct: 287 LEKEKIAKERKEQVGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDV 345

Query: 350 TLA 352
            +A
Sbjct: 346 LIA 348


>gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
 gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
          Length = 360

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130
           ++L+++  +++ + +E   +  E LL+ EA         D ND    +LE+ AG GG E+
Sbjct: 67  ALLKDSDPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +    I    K  +G G 
Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|257092416|ref|YP_003166057.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044940|gb|ACV34128.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 360

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 153/243 (62%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  L RMYTR+AE+R+++ E +     +  G +     I
Sbjct: 107 DERNVFLEIRAGTGGDESALFAGNLFRMYTRYAERRRWQVEVISASASDLGGYREIIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   ++  R HTS  ++ V P  D   E++++ +D RIDT
Sbjct: 167 IGSDVYARLKFESGAHRVQRVPDTEAQGRIHTSACTVAVMPEADALEEVQVNPADIRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH+PTGVVV+CQ +RSQHKNKAQA ++L A++   ++Q+R
Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGVVVECQDDRSQHKNKAQAMSVLVARIR--DMQER 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A+I    ++ +G G    +IR+Y   P   V D R N+       ++DGDLD+ + A
Sbjct: 285 EQDASIASERRSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELLGA 343

Query: 350 TLA 352
             A
Sbjct: 344 LTA 346


>gi|157803730|ref|YP_001492279.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
 gi|166223597|sp|A8EYR1|RF1_RICCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157784993|gb|ABV73494.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
          Length = 355

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 202/349 (57%), Gaps = 29/349 (8%)

Query: 16  WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           ++N  ++LS       F+    E   L + V + K   + +  L+ A +F  E+     D
Sbjct: 14  YENLGKKLSSGIMGDEFVKASKEYAELEEVVEKIKEYNKAKSELEEANNFKLEVG---LD 70

Query: 69  NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           N  L    + ED+   L+ +   L+R +K+ +       L   EADS  A +EV AG+GG
Sbjct: 71  NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDEADSKSAIIEVRAGSGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L  MY R+AE + +  E L I D    G K A+  IKG + +  LK E GV
Sbjct: 121 EEAALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIKGKDVFSKLKCESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S+ R HTS +++ V P V+D ++I++ + D RIDTYR+SGAGGQHVNTT+
Sbjct: 181 HRVQRIPETESHGRIHTSAATVAVLPEVED-VDIKLEDKDLRIDTYRSSGAGGQHVNTTN 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+E+      + + ++G
Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ--KRANNRRGQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+      +V+ +G LD+F+ A +A
Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIA 345


>gi|124004130|ref|ZP_01688976.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
 gi|123990200|gb|EAY29699.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
          Length = 356

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/263 (44%), Positives = 164/263 (62%), Gaps = 10/263 (3%)

Query: 91  NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           N Q+ K+E E K    L+  +  DS +  LE+  GAGG E+  +A  LLRMY R+AEKRK
Sbjct: 85  NPQKEKIEEELKTL--LIPKDPNDSKNVILEIRGGAGGDEAAIFAGDLLRMYQRFAEKRK 142

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E ++  DG   G K     I G + YG +K E GVHR+ R+   ++  R HTS +S+
Sbjct: 143 WKFELMDFTDGSSGGFKEVVCSISGEDVYGMMKYESGVHRVQRVPATETQGRVHTSAASV 202

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D +E+ I  SD R D + +SG GGQ VNTT SAVR+THIPTG+VV CQ E+SQ
Sbjct: 203 AVLPEMED-VEVNIDPSDVRSDYFCSSGPGGQSVNTTYSAVRLTHIPTGIVVSCQDEKSQ 261

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KNKA+A  +LR+KLYE+EL K++E   +G   K+ +G G    +IR+Y   P   V D 
Sbjct: 262 IKNKAKAMKVLRSKLYEIELSKQQE--ELGAQRKSMVGSGDRSDKIRTYNY-PQGRVTDH 318

Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349
           R      +  +V+DG++ DF+++
Sbjct: 319 RIKYTVHNLPNVMDGEIADFIES 341


>gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 356

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/345 (38%), Positives = 193/345 (55%), Gaps = 23/345 (6%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L D +     ++F  T  E   L   V   +  + E++ +D A S IK   D+  D + L
Sbjct: 19  LVDPELMKDNMAFQKTAKEHAELKPVVERYEEYLAEKEAVDEAHSIIKTSDDK--DLVEL 76

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131
            E+ LEE    +L E  D L++           SLL+ +  D  + +LE+ AG GG E+ 
Sbjct: 77  AEMELEEKK-GVLDELEDELKK-----------SLLTKDPYDDKNIFLEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL+MYT++AE   +K E ++ ++    G K    L+KG  AY  LK E G HR+ 
Sbjct: 125 LFAGDLLKMYTKYAEMNGWKVEVVDFNETGVGGYKEVVALVKGHGAYSKLKFEAGGHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  +D +++ I + D RID +RASGAGGQHVNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSACTVAVLPEAED-VDVHIEQKDLRIDVFRASGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV CQ ERSQ KN+ +A  +L++K+ E E+QK++       S K ++G G  
Sbjct: 244 MTHIPTGVVVSCQDERSQIKNREKAMKLLKSKILEAEIQKKQSAE--AASRKLQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +IR+Y   P   V D R   E  +    L G+++D + AT+A 
Sbjct: 302 SERIRTYNF-PQNRVTDHRIK-ESANLDRFLLGEMEDMIDATIAF 344


>gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 360

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/243 (45%), Positives = 151/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+  GAGG E+  +A  L RMY R+AE+  +KTE L +H  E+ GIK    LI
Sbjct: 110 DEKNVILEIRQGAGGDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +S+ R HTS  ++ V P  ++ ++IEI   + +I+T
Sbjct: 170 KGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTVTVAVLPEAEE-VDIEIKPEELKIET 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA GAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ +NK +A  +LRA+L   +  +R
Sbjct: 229 MRAGGAGGQHVNTTDSAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLK--DYYER 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E   I +  K ++G G    +IR+Y   P   V D R N      +D++DGDLD+ +  
Sbjct: 287 LEKEKIAKERKEQVGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDV 345

Query: 350 TLA 352
            +A
Sbjct: 346 LIA 348


>gi|239996062|ref|ZP_04716586.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
          Length = 361

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 193/339 (56%), Gaps = 11/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R   +     DP +  +  + + L +E   L++ ++     Q +  +NL   +  L E
Sbjct: 13  VERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQ-QAQENLASAQEMLNE 71

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + ++  K E+E  + E     L     D N+ +LE+ AGAGG E+  +A 
Sbjct: 72  DDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R ++ E +  ++GE  G K     + G   YG LK E G HR+ R+  
Sbjct: 132 DLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFESGGHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S  IEI+ ++ RIDT+RASGAGGQHVN TDSA+RITH+
Sbjct: 192 TESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVNKTDSAIRITHL 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E +KR        + K+ +G G    +I
Sbjct: 252 PTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEA--STRKSLVGSGDRSERI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++GDL   +   L
Sbjct: 310 RTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLIDPIL 347


>gi|313905737|ref|ZP_07839097.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
 gi|313469444|gb|EFR64786.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
          Length = 360

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/351 (37%), Positives = 197/351 (56%), Gaps = 17/351 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +F+    VQ RL  +  +  DP    +    + LM+E+  L          ++ ++ + D
Sbjct: 1   MFEKLEDVQIRLDEILCQLSDPATAGDSARMQKLMKEQAELSPVAEMYAAYRKNEETISD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSND---AYLEVHAG 124
           +L LLE    E D  + +   + LQ  K    +Y++   LL    D ND     +E+ AG
Sbjct: 61  SLELLE---SESDPDMREMLKEELQEAKANRSKYERELQLLLLPKDPNDDKSVIVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  + RMY R+AEK++++TE + I +    G+K  +  I G  AY  LK E
Sbjct: 118 AGGEEAALFAYEIYRMYVRYAEKQRWQTELMSIDETGLGGLKECSFEISGSGAYSKLKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ V P VDD I+IEI + D RID  RASG GGQ VN
Sbjct: 178 SGVHRVQRVPATESGGRIHTSTITVAVMPKVDDDIQIEIPDKDVRIDVMRASGNGGQCVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH PTG+V+  Q E+SQ +NKA+AW +LR+KLY LE++KR +     +  ++
Sbjct: 238 TTDSAVRLTHYPTGIVIYSQTEKSQIQNKAKAWELLRSKLYVLEMEKRHDAE--ADLRRS 295

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   V D R  +       +L+GDLD+ ++   A
Sbjct: 296 QIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHQIDSILNGDLDELIQTLTA 345


>gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440]
 gi|32171521|sp|Q88PW5|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440]
          Length = 360

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130
           ++L+++  +L+ + +E   +  E LL+ EA         D ND    +LE+ AG GG E+
Sbjct: 67  ALLKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +    +    K  +G G 
Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--LASERKLLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|253580116|ref|ZP_04857383.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848635|gb|EES76598.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39BFAA]
          Length = 358

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 203/348 (58%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  D+ + R   +  +  +P +  N    + LM+E+  L   +   +E +   + + D
Sbjct: 1   MFDKLDDLLIRFEEVLNELGEPGVTDNQEHFQKLMKEQSDLQPIVDAYREYKKNKETIQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127
           +L +LE   +ED   +L+E     ++   E+E++    LL  + + N +  +E+ AGAGG
Sbjct: 61  SLSMLEEEKDEDMREMLKEELSEAKKNVEELEHELKILLLPKDPNDNKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE + +++    G K  T +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMITGAGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P  ++ I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMPEAEE-IDFHLDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +     E+ +++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAE--AEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R  +      +VL+GDLD+ + + +A
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENVLNGDLDEIIDSLIA 344


>gi|76664975|emb|CAJ17928.1| protein chain release factor 2 [Candidatus Phytoplasma solani]
          Length = 175

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 122/166 (73%), Gaps = 1/166 (0%)

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN++RHTSF S  V P + D I+I +   D +ID +R+SGAGGQHVNTTD
Sbjct: 1   HRLVRVSPFDSNAKRHTSFVSCDVLPEIKDEIKINVKPEDLKIDVFRSSGAGGQHVNTTD 60

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEI 306
           SAVRITH+PTG+VV CQ ERSQ KN+ +A  ML+ KL++L L +++EE     +S + EI
Sbjct: 61  SAVRITHLPTGLVVGCQNERSQIKNREKALQMLKTKLFQLALKEQKEETVKQFQSDQKEI 120

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYV  PY+MVKD RTN E      V+DG+LDDF+   L 
Sbjct: 121 GWGSQIRSYVFHPYKMVKDHRTNQENFQLEQVMDGNLDDFINGYLT 166


>gi|315186593|gb|EFU20352.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           thermophila DSM 6578]
          Length = 357

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/338 (37%), Positives = 189/338 (55%), Gaps = 17/338 (5%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELALE 78
           R   L T   DP ++ +    + L +E  HL   +      + ++ RL +   +LE   E
Sbjct: 13  RFKELETALADPSVFNDQKRYRELAQEHAHLSQVVRTAEHYRRLEARLEEAKTVLE---E 69

Query: 79  EDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWA 134
           EDD  + +   + ++ ++ E+   +Q   LL    D  D     LE+ AG GG E+  +A
Sbjct: 70  EDDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E +E  + E  G +     I G   YG L+ E G HR+ RI 
Sbjct: 130 ADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQRIP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  +++ E+EI   D R+D +R+SG GGQ VNTTDSAVRITH
Sbjct: 190 VTESGGRIHTSAVTVAVLPEPEET-EVEIRPEDIRVDVFRSSGPGGQSVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV CQ E+SQHKNKA+A  +LRA+LYE+E Q++E  +      +++IG G    +
Sbjct: 249 LPTGLVVSCQDEKSQHKNKAKALKILRARLYEMEKQRQE--SERAAMRRSQIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           IR+Y   P   V D R N+       V+DGDLD+ + A
Sbjct: 307 IRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDA 343


>gi|328542097|ref|YP_004302206.1| peptide chain release factor 1 [polymorphum gilvum SL003B-26A1]
 gi|326411847|gb|ADZ68910.1| Peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1]
          Length = 357

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/242 (46%), Positives = 153/242 (63%), Gaps = 8/242 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+NDA LEV AG GG E+  +A  L RMY R+A+ + +K E L   +GE  G K     
Sbjct: 105 ADTNDAILEVRAGTGGDEAALFAGDLFRMYQRYADLKGWKVEILSASEGEMGGFKEVIAS 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I++ +SD RID
Sbjct: 165 VSGENVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPQAED-VDIDVHDSDLRID 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQHVNTTDSAVRITH+PTG+VV  Q ERSQHKNKA+A  +LRAK+Y+ E +K
Sbjct: 224 TYRASGAGGQHVNTTDSAVRITHLPTGIVVAVQDERSQHKNKAKAMQLLRAKIYDAEREK 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
               +   E+ + ++G G    +IR+Y   P   V D R  +       V+ G+ LD+ +
Sbjct: 284 --AASERTEARRLQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQVISGEALDEVI 340

Query: 348 KA 349
            A
Sbjct: 341 DA 342


>gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
           27405]
 gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|166223552|sp|A3DIL4|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125715301|gb|ABN53793.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium
           thermocellum ATCC 27405]
 gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
          Length = 360

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 188/324 (58%), Gaps = 15/324 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
           +  A  R   +N +  DP +  N  E K LM+E   L+  ++     K++   + D   +
Sbjct: 5   FQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIADAKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
           L   L+++   +++      Q  KLEV  K+ + LL      D  +  +E+  GAGG E+
Sbjct: 65  LNEKLDKEFREMVETELKEAQE-KLEVLKKEMKILLLPKDPNDERNVIVEIRGGAGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYTR+AE+  +KTE L+ +  E  G K     I+G  AY  LK E GVHR+
Sbjct: 124 ALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++N R HTS  ++ V P  ++ I++EI+ +D RIDTYRASGAGGQH+N TDSA+
Sbjct: 184 QRVPVTEANGRVHTSTVTVAVLPEAEE-IDVEINPNDLRIDTYRASGAGGQHINKTDSAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309
           RITH+PTG+VV CQ +RSQHKNK +A  +LR+KLYE+    RE+  N I +  K+++G G
Sbjct: 243 RITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEM---AREQQHNEIAQERKSQVGTG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNI 330
               +IR+Y   P   V D R  +
Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGL 322


>gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
 gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
          Length = 242

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 104/227 (45%), Positives = 148/227 (65%), Gaps = 6/227 (2%)

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML RMY RWAE++      ++   GEEAG+KS  L + G   YG+L+ E+G HRLV
Sbjct: 2   DWAEMLERMYLRWAEQQGHGVRLVDRAPGEEAGVKSVELEVAGRYVYGYLRAEKGTHRLV 61

Query: 192 RISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           R SP+++   R TSF+ + V PV+   D  +++++E D    T R+ G GGQ+VN  ++ 
Sbjct: 62  RNSPFNAKGLRQTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVETG 121

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELELQKREEIANI-GESSKTEIG 307
           VRI H+PTG+ V+C QERSQ +N+  A ++L+++ L  LE Q    +A I G+  K E  
Sbjct: 122 VRIVHLPTGISVKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVKAE-- 179

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG+QIR+YV  PY++VKD RT +E +  + VLDGDL DFM A L +K
Sbjct: 180 WGQQIRNYVFHPYKLVKDTRTGVETSDVAAVLDGDLADFMAAYLRMK 226


>gi|332290276|ref|YP_004421128.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
 gi|330433172|gb|AEC18231.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
          Length = 360

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 157/242 (64%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++TE L  ++ E+ G K   + I
Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRTEVLSANESEQGGYKEIIVKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 167 SGENVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESALPEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +++
Sbjct: 227 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRLVQAEEERK 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A   ++ ++ +G G    +IR+Y   P   V D R N+      ++++G +DD ++ 
Sbjct: 287 --AAEQADTRRSLLGSGDRSDKIRTYNY-PQGRVTDHRINLTLYRLDEIMNGKIDDLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|262038076|ref|ZP_06011481.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
 gi|261747896|gb|EEY35330.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
          Length = 359

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/244 (45%), Positives = 159/244 (65%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LI
Sbjct: 106 DDKNVIMEIRAGAGGDEAALFAADVFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +++ R HTS  ++ V P ++D  E+EI++SD +IDT
Sbjct: 166 KGNGAYSRLKFESGVHRVQRVPATEASGRIHTSTITVAVLPEIEDVNEVEINQSDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291
           YR+SGAGGQHVNTTDSAVRITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K 
Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQ 285

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R+E+ +     ++++G G    +IR+Y   P   V D R  +       VLDGDLD+ + 
Sbjct: 286 RKEVES---ERRSQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMID 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALIA 345


>gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
          Length = 362

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/346 (36%), Positives = 194/346 (56%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   ++ V+R   +     DP +  +  + + L +E   L+      +  Q +  D+L  
Sbjct: 6   LVKLESLVERYEEVQHLLGDPAVIGDQDKFRALSKEYSQLEEITHCFQAYQ-QAQDDLSA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E   +EDD  + +   D ++  K E+E    E  +L    D ND    +LE+ AGAGG 
Sbjct: 65  AEEMAKEDDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AEKR ++ E +  ++ E  G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V   V ++   EI  +D +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEKR--AAAISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     S+V++GDL   +   +
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTVYRLSEVMEGDLQSLVDPVI 347


>gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 358

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/341 (37%), Positives = 200/341 (58%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72
            D+  ++   L TK  DP +  N    + L +E   +   +   +E    Q RL + L L
Sbjct: 8   LDDLERKYQELETKLSDPDVISNPAVLQRLAKEHSEMSKVVEKYREYRQAQKRLEEALAL 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131
            E   +ED   + +E ++ L+ I  E+E +    LL  +  D     +E+ AGAGG E+ 
Sbjct: 68  TE-EDDEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDERSVIVEIRAGAGGEEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++++K E L  ++    G K     ++G +AY  LK E GVHR+ 
Sbjct: 127 LFAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQDAYSVLKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P  D+ +++EI   D +IDT+RASGAGGQ+VN TDSAVR
Sbjct: 187 RVPVTEASGRIHTSTATVAVLPEPDE-VDVEIRPEDLKIDTFRASGAGGQYVNMTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ ERSQ KN+A+A  +LRAKLY++E+++++E   +    + +IG G  
Sbjct: 246 ITHIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQEA--MASERRGQIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   V D R  +   +  ++L+GDLD+ + A
Sbjct: 304 SERIRTYNF-PQNRVTDHRIGLTLHNLDEILEGDLDELLYA 343


>gi|150015294|ref|YP_001307548.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
 gi|189039964|sp|A6LQG2|RF1_CLOB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149901759|gb|ABR32592.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
          Length = 360

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/334 (37%), Positives = 192/334 (57%), Gaps = 11/334 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDC 82
           L+ K  DP + QN  E + L +E   L+   N+    K++ + L  N  +L    +++  
Sbjct: 16  LSVKISDPSIMQNQNEWRKLCKEHADLEVIVNSYREYKKVVEDLKANKEMLSGESDKEMR 75

Query: 83  SILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +L E   +L   + ++E + Q   L     D  + ++E+  GAGG E+  +A  L RMY
Sbjct: 76  EMLNEEITDLTNREEQLETEIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFAYNLFRMY 135

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+AE +++  E + +++ +  G K    +IKG  AY  LK E GVHR+ R+   +S+ R
Sbjct: 136 TRYAETQRWGVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSGR 195

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P VDD +EIE+++ D RID +RASG GGQ VNTTDSAVRITH+PTG+VV
Sbjct: 196 IHTSTATVAVLPEVDD-VEIEVADKDVRIDVFRASGNGGQCVNTTDSAVRITHLPTGLVV 254

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQ KNK +A  +L+++LY  E  +RE    I E  K+++G G    +IR+Y   
Sbjct: 255 SCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAQGIAEDRKSQVGTGDRSERIRTYNY- 311

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           P   + D R  +        L GD+D+ + A + 
Sbjct: 312 PQGRITDHRIGLTLYKLDTFLGGDIDEMINALIT 345


>gi|310829178|ref|YP_003961535.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
 gi|308740912|gb|ADO38572.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
          Length = 357

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/334 (38%), Positives = 198/334 (59%), Gaps = 12/334 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLILLELALEEDD 81
           LN K  DP +  +  + + LM+E  H++  I+   E +  L        +L + ++++D 
Sbjct: 15  LNEKIADPDIIADQAQWQKLMKEHAHIEPIINRYNEYKKTLEGIEESKEMLSDKSIDKDF 74

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + +   D L   K  +E +    LL  +  D  +  +E+ AGAGG+E+  +A  L RM
Sbjct: 75  EEMCKAELDELTERKAALEDELKVLLLPKDPNDDKNVIVEIRAGAGGSEAALFAGDLFRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           +TR+AE++ +K+E +  +  +  GIK  T  I+G  AY  LK E GVHR+ RI   +S  
Sbjct: 135 FTRYAERQGWKSEIMNSNIPDIGGIKEITFSIEGRGAYSRLKYESGVHRVQRIPSTESGG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P  +D +EI+I+ +D RID YR+SG GGQ VNTTDSAVRITH PTG+V
Sbjct: 195 RIHTSTATVAVLPEAED-VEIDINPNDLRIDVYRSSGNGGQCVNTTDSAVRITHEPTGMV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ E+SQ KNK +A  +L+A+L+E+E+QK++  + I E+ K+++G G    +IR+Y  
Sbjct: 254 VTCQDEKSQLKNKEKAMKVLKARLFEIEMQKQQ--SEIAENRKSQVGTGDRSERIRTYNF 311

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            P   V D R  +        LDG++D+ + A +
Sbjct: 312 -PQGRVTDHRIGMTVYQLEAFLDGEIDEMVDALI 344


>gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893]
 gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893]
          Length = 361

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 151/235 (64%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L +MY R+AE+++++ E +   +GE  G K     I
Sbjct: 109 DGKNVFLEVRAGTGGDEAAIFAGDLFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P  D++  +EI++SD R+DT
Sbjct: 169 AGSAVYGALKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITHIPTG+VV+CQ+ERSQHKN+A+A + L ++L   E++++
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHIPTGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++   +  + K+ +G G    +IR+Y   P   V D R N+      +V+ GDLD
Sbjct: 289 QK--TMAATRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVISGDLD 340


>gi|332306089|ref|YP_004433940.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173418|gb|AEE22672.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 362

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +R   +      P +  +  + + L +E   L+  +    + Q    D     E+ ++E
Sbjct: 13  TERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQSAQQDFESAQEM-MQE 71

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
            D  + +   +  +  KL +E Y+    +L    D ND    ++E+ AGAGG E+  +A 
Sbjct: 72  SDPEMREMAQEEYKSSKLAIEQYEDELQILLLPKDPNDESNCFVEIRAGAGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R++K E + +++G+  G K     I G  AYG LK E G HR+ R+  
Sbjct: 132 DLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGILKFESGGHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P V +S  IE++++D +IDT+RASGAGGQHVN TDSA+RITH+
Sbjct: 192 TESQGRIHTSACTVVVMPEVAESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIRITHV 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+G+VV+CQ ERSQHKN+A+A  +L+++L +LE +KR+  A    + +  +  G    +I
Sbjct: 252 PSGIVVECQDERSQHKNRAKAMAVLQSRLNQLEEEKRQ--AEETSTRRNLVASGDRSERI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R+Y   P   V D R N+      DV+ GDLD  ++
Sbjct: 310 RTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344


>gi|34763568|ref|ZP_00144503.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742325|ref|ZP_04572806.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256845604|ref|ZP_05551062.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294785107|ref|ZP_06750395.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
 gi|27886757|gb|EAA23895.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229429973|gb|EEO40185.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256719163|gb|EEU32718.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294486821|gb|EFG34183.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
          Length = 357

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRA GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 226 YRAGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
          Length = 360

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     +
Sbjct: 107 DERDCFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   +I+ +D RIDT
Sbjct: 167 SGDGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   +  + +  +G G    ++R+Y   P   V D R N+      +V++G LD+ ++ 
Sbjct: 287 QQ--EVASTRRNLLGSGDRSDRVRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4]
 gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7]
 gi|119361605|sp|Q0HFC8|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361606|sp|Q0HYK8|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-4]
 gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-7]
          Length = 363

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 181/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L+  ++  K  Q  L D     E+ LEEDD  + +   + ++  K E+E  
Sbjct: 36  RALSKEYSQLEEVVAGFKAYQQALADLESAKEM-LEEDDAEMREMAQEEIKAAKAELERL 94

Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E  +L    D ND   A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G  AYG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
 gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
          Length = 363

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/285 (42%), Positives = 174/285 (61%), Gaps = 17/285 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGT 128
           + ELA EE     LQE+        LEV+ +  + LL  + D ND     LE+ AG GG 
Sbjct: 79  MRELAREE--LRALQES--------LEVKEQHIKILLLPK-DPNDGKNILLELRAGTGGD 127

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE++ +KTE + + DG   G+K A +LI G + Y  LK E GVH
Sbjct: 128 EAALFAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYESGVH 187

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P  ++ ++I++ E D RID YR+SG GGQ VNTTDS
Sbjct: 188 RVQRVPATESQGRVHTSAATVVVMPEAEE-VDIKLEEKDLRIDVYRSSGPGGQSVNTTDS 246

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVR+TH+PTG+VV CQ E+SQHKNKA+A  +LR+++ ++E+ K+E        S  + G 
Sbjct: 247 AVRVTHLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVKSGD 306

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R N+ + + S VLDGDL D + A  A
Sbjct: 307 RSEKIRTYNF-PQDRLTDHRINLTRHNLSSVLDGDLYDVVDALRA 350


>gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|13431785|sp|P57852|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 360

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/280 (41%), Positives = 174/280 (62%), Gaps = 12/280 (4%)

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134
           DD S+ +   + ++  K E+E   +Q + LL  + D ND    YLE+ AG GG E+  +A
Sbjct: 70  DDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPK-DPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++K E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+     ++ +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
 gi|32171537|sp|Q8DFF9|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576703|sp|Q7MMY6|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
          Length = 362

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/291 (39%), Positives = 173/291 (59%), Gaps = 10/291 (3%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123
           ++L+  E   +EDD  + +   + ++  K+ +E    E  +L    D ND    +LE+ A
Sbjct: 60  EDLVAAEEMAKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG+LK 
Sbjct: 120 GAGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKF 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ + P + ++   EI  SD +IDT+R+SGAGGQHV
Sbjct: 180 ESGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSA+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR   A + ++ +
Sbjct: 240 NTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKR--AAEVSDTRR 297

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +G G    +IR+Y   P   V D R N+     S+V++GDL   +   +
Sbjct: 298 NLLGSGDRSDRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVI 347


>gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016]
 gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
 gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016]
 gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
          Length = 363

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/291 (39%), Positives = 173/291 (59%), Gaps = 10/291 (3%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123
           ++L+  E   +EDD  + +   + ++  K+ +E    E  +L    D ND    +LE+ A
Sbjct: 61  EDLVAAEEMAKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRA 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG+LK 
Sbjct: 121 GAGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKF 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ + P + ++   EI  SD +IDT+R+SGAGGQHV
Sbjct: 181 ESGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSA+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR   A + ++ +
Sbjct: 241 NTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKR--AAEVSDTRR 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +G G    +IR+Y   P   V D R N+     S+V++GDL   +   +
Sbjct: 299 NLLGSGDRSDRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVI 348


>gi|237744127|ref|ZP_04574608.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|256027764|ref|ZP_05441598.1| peptide chain release factor 1 [Fusobacterium sp. D11]
 gi|289765720|ref|ZP_06525098.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
 gi|229431356|gb|EEO41568.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|289717275|gb|EFD81287.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
          Length = 357

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
 gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
          Length = 363

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 192/341 (56%), Gaps = 12/341 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR   +  +  DP +  +      L RER  L+  ++  ++++D +   +   E  LE +
Sbjct: 17  QRFDEVERQLADPDVATDPQRVAQLARERAELEEIVALYRQLKD-IDRQVAQAEELLEAE 75

Query: 81  DCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +++  ++ + R++   E  Y++    L      D  D  +E+ AG GG E+  +A  
Sbjct: 76  DPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTGGEEAALFAAD 135

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMYTR+AE++ +K E L     E  G K     ++G  AY   K E GVHR+ R+   
Sbjct: 136 LFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESGVHRVQRVPIT 195

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S+ R HTS +++ V P  D+ +E+ I E D RI+ +R+SG GGQ VNTTDSAVRITH+P
Sbjct: 196 ESSGRIHTSTATVAVLPEADE-VEVHIDEDDLRIEVFRSSGHGGQSVNTTDSAVRITHLP 254

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV CQ ERSQ KN+ +A  +LRA+LYEL+ +K EE    G   + ++G G    +IR
Sbjct: 255 TGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEE-ERTG-LRRQQVGTGERAEKIR 312

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R  +   +   VLDG++D F++   A++
Sbjct: 313 TYNF-PQDRVTDHRLKLTVNNLPAVLDGEIDIFIQELQALE 352


>gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254790859|sp|B9MR68|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 355

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 190/337 (56%), Gaps = 17/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81
           L  K  DP +     E + LM+E  +L   +   +E + R+ D +     LL+  L+ED 
Sbjct: 15  LEKKISDPEIISQPQEWQKLMKEHSNLQPIVEKFREYK-RILDTIKEAEELLDTDLDEDF 73

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +++E  +  +  K  VE +    LL  +  D  +  +E+ AGAGG E+  +A  L RM
Sbjct: 74  EKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+   +S  
Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P V+D +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H PTG+V
Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315
           V CQ ERSQH N+ +A  +LRA+LY+    +Q++E    I    ++++G G    +IR+Y
Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R  +       +LDG+LD+ + A + 
Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQILDGELDEIIDALIT 344


>gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259411|gb|EDS73377.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
          Length = 355

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/343 (38%), Positives = 199/343 (58%), Gaps = 19/343 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELAL 77
           +R + ++    +P +  N      L++E  HL+  +   K   ++ ++L  N  +L  + 
Sbjct: 10  KRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLESNKEMLNDSD 69

Query: 78  EEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQD 132
           ++D   ++ E  +S N Q+  LE E K    +L    D ND     +E+ AG GG E+  
Sbjct: 70  DDDFKEMILEDISSLNEQKEGLEQEIK----ILLIPKDPNDDKNVIVEIRAGVGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMYTR+AE+ ++K E L  ++    G K A   I+G  AY  LK E G HR+ R
Sbjct: 126 FAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S+ R HTS  ++ V P  +D +E+ I  +D RID YR+SG GGQ VNTTDSAVRI
Sbjct: 186 IPDTESSGRIHTSAITVAVLPEAED-VEVNIDPNDLRIDVYRSSGNGGQSVNTTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV CQ E+SQ KNK +A  +L+A+L+E+E +K++E   I  + K++IG G   
Sbjct: 245 THIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQEA--IASNRKSQIGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R  +     +DVLDGD+D+F+   + 
Sbjct: 303 ERIRTYNF-PQGRVTDHRVGLTLYKLNDVLDGDIDEFIDTLIV 344


>gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223]
 gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223]
          Length = 362

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/327 (37%), Positives = 187/327 (57%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPAVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P V ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 204 TVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GD+   ++  +
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
 gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
          Length = 357

 Score =  202 bits (515), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 192/340 (56%), Gaps = 17/340 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELA 76
           + R   L     DP ++ +    + L +E  HL   +   +E   ++ RL +   +LE  
Sbjct: 11  ITRFKELEEALADPSIFNDQKRYRELAQEHAHLSQVVRTAEEYRRLEARLEEAKTVLE-- 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
            EEDD  + +   + ++ ++ ++ +  ++ + LL      D  +  LE+ AG GG E+  
Sbjct: 69  -EEDDHELKEMAREEIKALEDQILHTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAAL 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ +K E +E  + E  G +     I G   YG L+ E G HR+ R
Sbjct: 128 FAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P  +++ E+EI   D R+D +R+SG GGQ VNTTDSAVRI
Sbjct: 188 IPVTESGGRIHTSAVTVAVLPEPEET-EVEIRPEDIRVDVFRSSGPGGQSVNTTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ E+SQHKNKA+A  +LRA+LYE+E Q++E  +      +++IG G   
Sbjct: 247 THLPTGLVVTCQDEKSQHKNKAKALKILRARLYEMEKQRQE--SERAAMRRSQIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +IR+Y   P   V D R N+       V+DGDLD+ + A
Sbjct: 305 ERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDA 343


>gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 357

 Score =  202 bits (515), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 195/335 (58%), Gaps = 13/335 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDC 82
           L  K  DP +  +  + K + RE   L   +    EI   +D + +N  LL+ A +++  
Sbjct: 15  LEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTELLKEAEDKEMI 74

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L+   D  ++  LE   +  + LL      D  D  +E+ AGAGG E+  +A  L RM
Sbjct: 75  DLLKAEIDENKK-NLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y  +A+K+ +KTE +++      G+K AT +++G  AY  LK E GVHR+ R+   +S  
Sbjct: 134 YHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P  D+ ++I+I  +D R D YR+SG GGQ VNTTDSAVR+THIPTG+V
Sbjct: 194 RIHTSTATVAVLPEADE-VDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ E+SQ KNK +A  +LRA+LYE+E +KR++   I ++ K+++G G    +IR+Y  
Sbjct: 253 VTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQK--EISDNRKSQVGTGDRSERIRTYNY 310

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   + D R N       D LDG++++ + + + 
Sbjct: 311 -PQGRITDHRINKTIYQLDDFLDGNIEEMIDSLIT 344


>gi|222100202|ref|YP_002534770.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
 gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
          Length = 349

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 157/244 (64%), Gaps = 8/244 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLS E   + A +E+  G GG E+  +A  L RMYTR+AE++ +  E  E+H+ +  G+K
Sbjct: 86  LLSPET-GDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWDVEIAEMHETDLGGVK 144

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A   +KG NAY  LK E GVHR+ R+   +S  R HTS +++ V P +++  +IEI   
Sbjct: 145 EAVFFVKGKNAYSILKYESGVHRVQRVPITESGGRIHTSTATVVVLPEIEER-DIEIRPE 203

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERSQ++NK  A  +LRA+LY+
Sbjct: 204 DLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNKQTALRILRARLYQ 263

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L+ ++ E+   + +  K++IG G    +IR+Y   P   V D R N       ++LDGDL
Sbjct: 264 LQREQLEK--ELSQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQEILDGDL 320

Query: 344 DDFM 347
           D+ +
Sbjct: 321 DEII 324


>gi|258544629|ref|ZP_05704863.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
 gi|258520137|gb|EEV88996.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
          Length = 360

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 107/238 (44%), Positives = 149/238 (62%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D YLE+ AG GG E+  +A  L RMY ++AE++ +K E L  + GE  G K     I
Sbjct: 107 DGADIYLEIRAGTGGDEAAIFAGDLFRMYGKYAEQKNWKIEILSENPGEHGGYKEIISQI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS +++ + PV DD   IEI+ +D ++DT
Sbjct: 167 SGNNVYSTLKYESGAHRVQRVPETESGGRIHTSAATVAILPVGDDIQPIEINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A  +L A+L ++E  K 
Sbjct: 227 YRASGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRAKAMRLLAARLLDVERTKA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +         K+ +G G    +IR+Y   P   V D R N+   S +D+L+G LD  +
Sbjct: 287 QN--EQAAERKSLVGSGDRSERIRTYNY-PQSRVTDHRINLTLYSLADILEGGLDAII 341


>gi|325474790|gb|EGC77976.1| peptide chain release factor 1 [Treponema denticola F0402]
          Length = 361

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/350 (37%), Positives = 194/350 (55%), Gaps = 29/350 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCD 68
            DN  +RL  +  + E+P+L ++V + K  MRE  +L       DN +S  K+I+D    
Sbjct: 5   LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKL- 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVH 122
                 L  EE D  + +   + L    LE  +++ E+ L          +  +  +E+ 
Sbjct: 64  ------LIQEESDAELKEMAREELH--SLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIR 115

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+  +A  L RMYT +AE + +K E L +++ E  G K  T  I G   YG L+
Sbjct: 116 GGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLR 175

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   + + R HTS  ++ V P  +++ EIEI++ D RID  RA G GGQ 
Sbjct: 176 YESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEET-EIEINQEDLRIDVMRAGGPGGQC 234

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K++  A   ++ 
Sbjct: 235 VNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQ--AERAQNR 292

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K+++G G    +IR+Y   P   V D R N+       V+ G LD+ + A
Sbjct: 293 KSQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYKLDSVMQGSLDELIDA 341


>gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2]
          Length = 361

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/343 (37%), Positives = 194/343 (56%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+R   +     DP +  N  + + L +E   L++ +      Q +  +NL     
Sbjct: 9   LENLVERFEEVQALLGDPQVIGNQDKFRNLSKEFSQLESVVGGFNAYQ-QAQENLDSANE 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQ 131
            L+EDD  + +   + L+  K ++E  + E  +L    D ND    +LEV AGAGG E+ 
Sbjct: 68  MLKEDDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLEVRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + ++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGILKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S  I+I+ +D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L  +E +KR        + K+ +G G  
Sbjct: 248 ITHLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEEEKRAAEEA--STRKSLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+      +V++GDL   +   +
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTIYRLDEVIEGDLKQLLDPIM 347


>gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
 gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
          Length = 365

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 112/244 (45%), Positives = 156/244 (63%), Gaps = 9/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AGAGG E+  +A  L RMY R+AE++ +K E L +++    GIK     I
Sbjct: 110 DEKNVILEIRAGAGGEEAALFAQDLFRMYCRYAERKGWKVEILSMNETGLGGIKEVVATI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   +S  R HTS +++ + P  ++ +EIEI ESD +IDT
Sbjct: 170 SGKGAYSRLKYESGVHRVQRIPVTESGGRIHTSTATVAILPEAEE-VEIEIKESDLKIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291
           YR+SGAGGQHVNTTDSAVRITH+PTG+VV C  ERSQ +N+ +A  +LRA+L EL E Q+
Sbjct: 229 YRSSGAGGQHVNTTDSAVRITHLPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQ 288

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +E++ +   + K ++G G    +IR+Y   P   V D R  +   +  + LDGDLD+ + 
Sbjct: 289 KEKMDS---ARKAQVGSGDRSEKIRTYNF-PEGRVTDHRIKLTLYNLQEFLDGDLDEMID 344

Query: 349 ATLA 352
           A  A
Sbjct: 345 ALAA 348


>gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
 gi|189039985|sp|B0KNE4|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
          Length = 360

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/285 (40%), Positives = 171/285 (60%), Gaps = 18/285 (6%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130
           ++L+++  +L+ + +E   +  E LL+ E+         D ND    +LE+ AG GG E+
Sbjct: 67  ALLKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +    I    K  +G G 
Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+   S  D+L G ++  ++  LA
Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLA 348


>gi|237737785|ref|ZP_04568266.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
 gi|229419665|gb|EEO34712.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
          Length = 358

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/250 (43%), Positives = 149/250 (59%), Gaps = 6/250 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E D  +  +E+  GAGG E+  +A  L RMY R+AE+RK+K E +E  +    GIK
Sbjct: 100 LPKDENDDKNVIVEIRGGAGGDEAALFAGDLFRMYNRYAERRKWKVEIIEKQEIGIGGIK 159

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A   I G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V+D  E++I   
Sbjct: 160 EAVFSINGLGAYSRLKFESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPK 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L +KLYE
Sbjct: 220 DLKIDTYRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLVSKLYE 279

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +E +K+   + +    K ++G G    +IR+Y   P   + D R           LDGD+
Sbjct: 280 MECEKQR--SQVESERKLQVGTGDRSEKIRTYNF-PQGRITDHRIKFTVYQLDAFLDGDI 336

Query: 344 DDFMKATLAI 353
           D+ + A +  
Sbjct: 337 DEMIDALITF 346


>gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|166223550|sp|A7G9P2|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576659|sp|B1IE21|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str.
           230613]
 gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
          Length = 358

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 201/344 (58%), Gaps = 18/344 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  N  E + L +E   L+  ++  +E +    D    
Sbjct: 2   LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++ + L++E  + E ++L    D ND    ++E+ AGAGG 
Sbjct: 62  KEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVH
Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS
Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R       E  K+++G 
Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R  +        LDGD+D+ ++A
Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341


>gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1]
 gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 359

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/345 (37%), Positives = 188/345 (54%), Gaps = 11/345 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   D   +RL  LN+         ++   + + RE   L   ++   E      D    
Sbjct: 6   LAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRTA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131
            EL  + D  +  QE  D  +     +E    + LL  +  D  + +LE+ AG GG ES 
Sbjct: 66  QELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+++++ E +   + E  G K     I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  ++EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIANIGESSKTEIGWG 309
           ITH+PTG+VV+CQ +RSQHKNKAQA  +L A++ +++L  Q+ EE A    + K+ IG G
Sbjct: 246 ITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAA----TRKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   + D R N+       ++DGDLD+   A +
Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLDELTNALI 345


>gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341]
 gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341]
          Length = 362

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 187/327 (57%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GD+   ++  +
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
 gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
          Length = 362

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 187/327 (57%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPAVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GD+   ++  +
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|153809900|ref|ZP_01962568.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
 gi|149834078|gb|EDM89158.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
          Length = 359

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/328 (37%), Positives = 192/328 (58%), Gaps = 11/328 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSIL-QE 87
           +P +  N    + LM+E+  L   +   KE +D    + D+L +LE   +E+   +L +E
Sbjct: 21  EPGVTDNQERFQKLMKEQSELQPIVDAYKEYKDNKETIQDSLSMLEEEKDEEMREMLKEE 80

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            SD  +R++   +  +   L     DS +  +E+ AGAGG E+  +A  + RMY ++AE 
Sbjct: 81  LSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGGDEAALFAAEIYRMYVKYAES 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R++KTE + +++    G K  T +I+G  AY  LK E GVHR+ R+   +S  R HTS  
Sbjct: 141 RRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTC 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ + P  ++ I+  +  +DC+ D +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+
Sbjct: 201 TVAIMPEAEE-IDFHLDMNDCKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEK 259

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQ KNK +A  +LR++LYE+EL K+ +     E+ +++IG G    +IR+Y   P   V 
Sbjct: 260 SQLKNKDKALKVLRSRLYEMELAKQHDAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVT 316

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           D R  +       VL GDLD+ + + +A
Sbjct: 317 DHRIKLTLHRLDAVLGGDLDEILDSLIA 344


>gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
          Length = 355

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 190/337 (56%), Gaps = 17/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81
           L  K  DP +     E + LM+E  +L   +   +E + R+ + +     LL+  L+ED 
Sbjct: 15  LEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDLDEDF 73

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +++E  +  +  K  VE +    LL  +  D  +  +E+ AGAGG E+  +A  L RM
Sbjct: 74  EKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+   +S  
Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P V+D +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H PTG+V
Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315
           V CQ ERSQH N+ +A  +LRA+LY+    +Q++E    I    ++++G G    +IR+Y
Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R  +       VLDG+LD+ + A + 
Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
 gi|259585216|sp|C3KYH5|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
          Length = 358

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 201/344 (58%), Gaps = 18/344 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  N  E + L +E   L+  ++  +E +    D    
Sbjct: 2   LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++ + L++E  + E ++L    D ND    ++E+ AGAGG 
Sbjct: 62  KEMLKEESDKDLREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVH
Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS
Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R       E  K+++G 
Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R  +        LDGD+D+ ++A
Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341


>gi|86156794|ref|YP_463579.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|119361506|sp|Q2IMW2|RF1_ANADE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85773305|gb|ABC80142.1| bacterial peptide chain release factor 1 (bRF-1) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 370

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/336 (34%), Positives = 195/336 (58%), Gaps = 12/336 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR   L     DP +  N    + + +ER  ++  ++ ++  + +L D++   E  L + 
Sbjct: 15  QRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYR-KLLDDVAGNEALLGDK 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +   + L +++ +VE  + +  L        D  D  +E+ AGAGG E+  +A  
Sbjct: 74  DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGLFAAE 133

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ R+   
Sbjct: 134 VMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQRVPAT 193

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  ++ I+++++ +D  +D +R++G+GGQ VNTTDSAVR+TH P
Sbjct: 194 EAQGRIHTSTVTVAVMPEAEE-IDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQQE+SQ KN+  A  MLRAKL+E+E Q+R+  A    + K+++G G    +IR
Sbjct: 253 TGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIE-QERQRSARDA-TRKSQVGTGDRSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   + D R N  + +   V+DGD+ D + A
Sbjct: 311 TYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDA 345


>gi|109898878|ref|YP_662133.1| peptide chain release factor 1 [Pseudoalteromonas atlantica T6c]
 gi|119361579|sp|Q15SQ9|RF1_PSEA6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109701159|gb|ABG41079.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudoalteromonas
           atlantica T6c]
          Length = 362

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 156/239 (65%), Gaps = 6/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D ++ ++E+ AGAGG E+  +A  L RMY+R+AE R++K E + +++G+  G K     I
Sbjct: 109 DESNCFIEIRAGAGGDEAAIFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V +S  IE++++D +IDT
Sbjct: 169 IGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+P+G+VV+CQ ERSQHKN+A+A  +L+++L +LE +KR
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEEKR 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +  A    + +  +  G    +IR+Y   P   V D R N+      DV+ GDLD  ++
Sbjct: 289 Q--AEETSTRRNLVASGDRSERIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344


>gi|260494288|ref|ZP_05814419.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
 gi|260198434|gb|EEW95950.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
          Length = 357

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
 gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
          Length = 361

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/282 (40%), Positives = 166/282 (58%), Gaps = 10/282 (3%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAG 124
           +L+  E   +++D  +     D  +  K ++E      Q   L     D+N+ YLEV AG
Sbjct: 61  DLVAAEEMFKDEDPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +A  L RMY R+AE +K+K E +  ++GE  G K     I G   YG LK E
Sbjct: 121 TGGDEAAIFAGDLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ V P + ++  IEI+ +D ++DT+RASGAGGQHVN
Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQHVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L ++L + E +KR   A      + 
Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKRH--AEEATQRRN 298

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            +G G    +IR+Y   P   + D R N+     ++++ GDL
Sbjct: 299 LVGSGDRSERIRTYNY-PQGRITDHRINLTLYKLNEIVSGDL 339


>gi|42527989|ref|NP_973087.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
 gi|81570139|sp|Q73JU6|RF1_TREDE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41819034|gb|AAS13006.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
          Length = 361

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/350 (37%), Positives = 194/350 (55%), Gaps = 29/350 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCD 68
            DN  +RL  +  + E+P+L ++V + K  MRE  +L       DN +S  K+I+D    
Sbjct: 5   LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKL- 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVH 122
                 L  EE D  + +   + L    LE  +++ E+ L          +  +  +E+ 
Sbjct: 64  ------LIQEESDAELKEMAREELH--SLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIR 115

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+  +A  L RMYT +AE + +K E L +++ E  G K  T  I G   YG L+
Sbjct: 116 GGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLR 175

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   + + R HTS  ++ V P  +++ EIEI++ D RID  RA G GGQ 
Sbjct: 176 YESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEET-EIEINQEDLRIDVMRAGGPGGQC 234

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K++  A   ++ 
Sbjct: 235 VNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQ--AERAQNR 292

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K+++G G    +IR+Y   P   V D R N+       V+ G LD+ + A
Sbjct: 293 KSQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYKLDAVMQGSLDELIDA 341


>gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
 gi|189039978|sp|A6W1C2|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
          Length = 362

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 107/238 (44%), Positives = 152/238 (63%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LEV AG GG E+  ++  L RMY+R+AE +++K E +   DGE  G K     I
Sbjct: 109 DSRNVFLEVRAGTGGDEASIFSGDLFRMYSRYAETQRWKVEIVSASDGEHGGYKEVIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P +D+  +I I++SD RIDT
Sbjct: 169 VGEGAYSKLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVDDIIINKSDLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ+ERSQHKN+A+A ++L ++L   EL+K 
Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAELEK- 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +   E+ K+ +G G    +IR+Y   P   V D R N+      +++ G+LD  +
Sbjct: 288 -AASEQSETRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDEIVAGELDSLI 343


>gi|225575054|ref|ZP_03783664.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037724|gb|EEG47970.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
          Length = 357

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/330 (38%), Positives = 196/330 (59%), Gaps = 15/330 (4%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDCSIL-QE 87
           +P +  N    + LMRE+  L   +   KE    Q  + D++ +LE   +E+   +L +E
Sbjct: 21  EPGVADNQERFQKLMREQSELQPIVDTYKEYKENQQTIQDSVSMLEEESDEEMREMLKEE 80

Query: 88  TSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            SD  +R+ +LE E K    LL  +  DS +  +E+ AGAGG E+  +A  + RMY ++A
Sbjct: 81  LSDAKRRVGELENELKIL--LLPKDPNDSKNVIVEIRAGAGGDEAALFAAEIYRMYVKYA 138

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R++KTE L +++    G K  T +I+G  AY  LK E GVHR+ R+   +S  R HTS
Sbjct: 139 ESRRWKTEMLSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVHRVQRVPETESGGRIHTS 198

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ + P  ++ I+  +  +DC+ D +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ 
Sbjct: 199 TITVAIMPEAEE-IDFHLDLNDCKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIVISCQD 257

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           E+SQ KNK +A  +LR++LYE+ELQK+ +     E+ ++++G G    +IR+Y   P   
Sbjct: 258 EKSQLKNKDKALKVLRSRLYEMELQKQHDAE--AEARRSQVGTGDRSEKIRTYNF-PQGR 314

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           V D R  +        L+GDLD+ + + +A
Sbjct: 315 VTDHRIKLTLHRLEGTLNGDLDEVIDSLIA 344


>gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
 gi|254790873|sp|C1FQ97|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 358

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 200/344 (58%), Gaps = 18/344 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  N  E + L +E   L+  ++  +E +    D    
Sbjct: 2   LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++ + L +E  + E ++L    D ND    ++E+ AGAGG 
Sbjct: 62  KEMLKEESDKELREMAQEEIKELTLRLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVH
Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS
Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R       E  K+++G 
Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R  +        LDGD+D+ ++A
Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341


>gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693241|sp|B4RSV6|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 361

 Score =  202 bits (513), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 192/339 (56%), Gaps = 11/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R   +     DP +  +  + + L +E   L++ ++     Q +  +NL   +  L E
Sbjct: 13  VERFEEVQALLGDPEVIGDQDKFRNLSKEFSQLEDVVAGFNAYQ-QAQENLASAQEMLNE 71

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + ++  K E+E  + E     L     D N+ +LE+ AGAGG E+  +A 
Sbjct: 72  DDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R ++ E +  ++ E  G K     + G   YG LK E G HR+ R+  
Sbjct: 132 DLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLKFESGGHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S  IEI+ ++ RIDT+RASGAGGQHVN TDSA+RITH+
Sbjct: 192 TESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQHVNKTDSAIRITHL 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E +KR        + K+ +G G    +I
Sbjct: 252 PTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEA--STRKSLVGSGDRSERI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++GDL   +   L
Sbjct: 310 RTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLVDPIL 347


>gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 361

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 181/313 (57%), Gaps = 15/313 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+       KLE 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           E + F  LL  +  D  + +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   
Sbjct: 97  ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K     I G   Y  LK E G HR+ RI   +S  R HTS  ++ V P  D+ 
Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRIPATESQGRIHTSACTVAVMPEADEV 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +
Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           ML++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+     
Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331

Query: 336 SDVLDGDLDDFMK 348
            +V++G LD  ++
Sbjct: 332 DEVMEGSLDSIIQ 344


>gi|37525987|ref|NP_929331.1| peptide chain release factor 1 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|46576710|sp|Q7N586|RF1_PHOLL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|36785417|emb|CAE14363.1| Peptide chain release factor 1 (RF-1) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 360

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 150/237 (63%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY+R+AE R++K E +  +DGE  G K     +
Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVISANDGEHGGYKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   EIS SD RIDT
Sbjct: 167 SGEQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPDAELPEISPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +E     E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QE----AEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLD 338


>gi|164688895|ref|ZP_02212923.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
 gi|164602099|gb|EDQ95564.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
          Length = 354

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 153/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE+R++KTE L   D    G K  + +I
Sbjct: 106 DEKNVIVEIRGGAGGDEAALFAGDLFRMYSRYAERRRWKTELLSASDTGVGGYKEVSFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ RI   +S  R HTS +++ V P V+D +EIEI+ +D RID 
Sbjct: 166 KGKGAYSRLKYESGVHRVQRIPSTESGGRIHTSTATVAVLPEVED-VEIEINPNDLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVRITH+PTG VV CQ E+SQ KNK +A  +L+A+LY+  L ++
Sbjct: 225 FRASGNGGQCVNTTDSAVRITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +  +I    ++++G G    +IR+Y   P   V D R N+        LDGDLD+ + A
Sbjct: 285 HD--DIAAERRSQVGTGDRSERIRTYNF-PQGRVSDHRINLTLYKLESFLDGDLDEMIDA 341

Query: 350 TLA 352
            + 
Sbjct: 342 LIT 344


>gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
 gi|166223588|sp|Q1IEX1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
          Length = 360

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/243 (44%), Positives = 152/243 (62%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+R+AEKR ++ E L  ++GE  G K     +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+ + IEI+ +D R+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    
Sbjct: 229 YRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +    I    K  +G G    +IR+Y   P   V D R N+   S  D+L G +D  ++ 
Sbjct: 289 QNA--IASERKLLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEP 345

Query: 350 TLA 352
            LA
Sbjct: 346 LLA 348


>gi|187777270|ref|ZP_02993743.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
 gi|187774198|gb|EDU38000.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
          Length = 358

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 201/344 (58%), Gaps = 18/344 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  N  E + L +E   L+  ++  +E +    D    
Sbjct: 2   LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++ + L++E  + E ++L    D ND    ++E+ AGAGG 
Sbjct: 62  KEMLREESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVH
Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS
Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R       E  K+++G 
Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R  +        LDGD+D+ ++A
Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341


>gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 359

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 114/258 (44%), Positives = 160/258 (62%), Gaps = 8/258 (3%)

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           Q+ KLE E  Q   +     D  +  LE+  GAGG E+  +A  L RMY R+AEK  +K 
Sbjct: 90  QKEKLESEI-QIALIPKDPNDDKNVILEIRQGAGGDEAALFAAELFRMYQRYAEKNGWKV 148

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L +H+ E  GIK    LIKG  AY  LK E GVHR+ R+   +S+ R HTS +++ V 
Sbjct: 149 EILSLHENERGGIKEVIALIKGEGAYSKLKYESGVHRVQRVPETESSGRIHTSTATVAVL 208

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  ++ +++EI+  D +I+T RASGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ +N
Sbjct: 209 PEAEE-VDVEINPDDLKIETMRASGAGGQHVNTTDSAVRITHIPTGIVVSCQDERSQLQN 267

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329
           +A+A  +LRA+L +   + ++E   I    K+++G G    +IR+Y   P   V D R  
Sbjct: 268 RAKAMQILRARLKDYYDRIQQE--KIKSERKSQVGTGDRSEKIRTYNF-PQNRVTDHRIG 324

Query: 330 IEKTSPSDVLDGDLDDFM 347
                 +++LDG+LD+ +
Sbjct: 325 YTSHRINEILDGELDEII 342


>gi|331270451|ref|YP_004396943.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
 gi|329127001|gb|AEB76946.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
          Length = 357

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 195/333 (58%), Gaps = 11/333 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP +  N  E + L +E   L+  ++  +E ++   + +   EL  EE+D  + 
Sbjct: 15  LSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELVANKELLSEENDRDMK 74

Query: 86  QETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141
           +   + ++ ++  +   + E  +L    D ND    ++E+ AGAGG E+  +A  L RMY
Sbjct: 75  EMIQEEIKTLEESIVSDEEELKILLLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFRMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GVHR+ R+   +S+ R
Sbjct: 135 TRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGVHRVQRVPDTESSGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P VDD ++I+I  +D RID +RASG GGQ VNTTDSAVR+THIPTG+VV
Sbjct: 195 IHTSTATVAVLPEVDD-VDIQIDPNDIRIDVFRASGHGGQCVNTTDSAVRMTHIPTGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQ KNK +A  +L+A+LY  E  + E  A+I    K+++G G    +IR+Y   
Sbjct: 254 SCQDEKSQLKNKEKALKVLKARLY--EKAEAERAASISADRKSQVGTGDRSERIRTYNY- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           P   V + R  +        LDGD+++ + A +
Sbjct: 311 PQGRVTEHRIGVTLYKLDAFLDGDMEEIIDALI 343


>gi|269121056|ref|YP_003309233.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
 gi|268614934|gb|ACZ09302.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
          Length = 359

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 107/243 (44%), Positives = 153/243 (62%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RM++R+AE+ K+K E ++ +D    G+K    LI
Sbjct: 106 DEKNVIMEIRAGAGGDEAALFAYDVFRMFSRYAERNKWKVEVIDRNDIGVGGLKEIVFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +S+ R HTS  ++ V P +DD  ++EI+  D ++DT
Sbjct: 166 KGKGAYSKLKYESGVHRVQRVPDTESSGRIHTSTITVAVLPEIDDVSQVEINPGDLKVDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVNTTDSAVRITHIPTG+VV  Q ERSQ KN+ +A  +L +K+YE+E++  
Sbjct: 226 YRASGAGGQHVNTTDSAVRITHIPTGIVVTSQDERSQLKNRERAMKVLASKIYEMEVE-- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    + ++G G    +IR+Y   P   V D R  +       VLDGDL + + A
Sbjct: 284 EQRKTVESERRLQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDQVLDGDLVELIDA 342

Query: 350 TLA 352
             A
Sbjct: 343 LTA 345


>gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|119361504|sp|Q0VS77|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 361

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/344 (36%), Positives = 187/344 (54%), Gaps = 13/344 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R   L     DP +  N  + + L RE   +D  +   ++ Q  + D+      A
Sbjct: 10  DKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVEDHGAAK--A 67

Query: 77  LEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +++D  + +     +E  D  +R++      Q   L     D  + +LEV AG GG E+ 
Sbjct: 68  MQDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++A++R +K E +   +GE  G K     + G   Y  +K E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ +    +D  +I+I   D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 188 RVPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY  + Q+    A      K+ +G G  
Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLSAKLY--DAQQNAAHAEQAAERKSLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+     +++++GDLD+ + A LA
Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYRLNEIVEGDLDEILGALLA 348


>gi|312877228|ref|ZP_07737197.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796037|gb|EFR12397.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 355

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 191/337 (56%), Gaps = 17/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81
           L  K  DP +     E + LM+E  +L   +   +E + R+ + +     LL+  L+ED 
Sbjct: 15  LEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDLDEDF 73

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +++E  ++ +  K  VE +    LL  +  D  +  +E+ AGAGG E+  +A  L RM
Sbjct: 74  EKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+   +S  
Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P V+D +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H PTG+V
Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315
           V CQ ERSQH N+ +A  +LRA+LY+    +Q++E    I    ++++G G    +IR+Y
Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R  +       VLDG+LD+ + A + 
Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR]
 gi|61214579|sp|Q5QUZ8|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR]
          Length = 364

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 107/242 (44%), Positives = 151/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    YLE+ AGAGG E+  +A  L RMY+R+AEK  +K   +   DGE  G K     +
Sbjct: 110 DDRSCYLEIRAGAGGDEASIFAGDLFRMYSRYAEKNGWKVNIVSASDGEHGGYKEIIAHM 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG +K E G HR+ R+   +S  R HTS  ++ V P + ++  +EI+ +D R+DT
Sbjct: 170 SGDGVYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAEAVEINPADLRVDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSA+R+THIPTGVVV+CQ+ERSQHKN+A+A ++L+A++  LE +KR
Sbjct: 230 YRASGAGGQHVNRTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSVLQARIQRLEDEKR 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    + +  +G G    +IR+Y   P   V D R N+      +VL GD+D  + A
Sbjct: 290 Q--AEEDSTRRNLVGSGDRSERIRTYNY-PQSRVTDHRINLTLYRLDEVLTGDIDLILDA 346

Query: 350 TL 351
            +
Sbjct: 347 II 348


>gi|254302818|ref|ZP_04970176.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323010|gb|EDK88260.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 357

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I
Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586]
 gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586]
          Length = 362

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 187/327 (57%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPAVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GD+   ++  +
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|160947003|ref|ZP_02094206.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
 gi|158447387|gb|EDP24382.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
          Length = 365

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/349 (37%), Positives = 204/349 (58%), Gaps = 14/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           LFD  +  V++   L  K  DP + +++   + L +E   +   +   +E    +  L +
Sbjct: 10  LFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 69

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           N  +L+ +L+++   +++E    L+   +E E +  + LL      D  + ++EV AG G
Sbjct: 70  NKEMLKESLDDEMKELVKEEISELED-SIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTG 128

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LLRMY  +A+K+K+KTE + I +    GIK    L+KG  AY  LK E G
Sbjct: 129 GDEAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S+ R HTS +++ V P V+D +++ I+++D RID YRASG GGQ VNTT
Sbjct: 189 VHRVQRVPATESSGRIHTSAATVAVLPEVED-VDVVINQNDLRIDVYRASGNGGQCVNTT 247

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTGVVV CQ E+SQ KNK +A  +L+++LY  E  + E+  +I ++ K++I
Sbjct: 248 DSAVRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLY--EKYQEEQNKDIADARKSQI 305

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V D R N+        L+GD+ + + A + 
Sbjct: 306 GSGDRSERIRTYNF-PQGRVTDHRINMTIYQLDSFLNGDISEMIDALIT 353


>gi|254491165|ref|ZP_05104346.1| peptide chain release factor 1 [Methylophaga thiooxidans DMS010]
 gi|224463678|gb|EEF79946.1| peptide chain release factor 1 [Methylophaga thiooxydans DMS010]
          Length = 362

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/284 (39%), Positives = 174/284 (61%), Gaps = 10/284 (3%)

Query: 75  LALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTES 130
           L LEEDD  + +   + L Q  + + E +     L    D ND    +LE+ AG GG E+
Sbjct: 67  LMLEEDDAEMREMAREELNQAEQTQEELELSLQKLLLPKDPNDQRNIFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+++AE R++K E +   +GE  G K     I G  AY  LK E G HR+
Sbjct: 127 AIFSGDLFRMYSKYAEVRRWKVEVINAQEGEHGGYKEMICRIVGEGAYSRLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P VD+   ++I+ +D R+DT+RASGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRIHTSACTVAILPEVDEIDAVDINPADIRVDTFRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ+ERSQHKN+A+A ++L++++   ++QK+E  A   E+ K+ +G G 
Sbjct: 247 RITHLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAEQVQKQE--AEQAETRKSLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R N+     +++++GDLD  ++  +
Sbjct: 305 RSERIRTYNY-PQGRITDHRINLTLYKLNEIVEGDLDQVIEPLI 347


>gi|198284467|ref|YP_002220788.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665453|ref|YP_002427134.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248988|gb|ACH84581.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517666|gb|ACK78252.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 365

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/239 (44%), Positives = 147/239 (61%), Gaps = 6/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LE+ AG GG E+  +A +L RMYTR+AE + F    L   D E  G K   L I
Sbjct: 112 DDRSVFLEIRAGTGGEEAALFAGVLARMYTRYAESKGFGVVILSASDSERGGYKEVVLEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P VD   EI I+ +D RIDT
Sbjct: 172 SGRGAYSCLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDTVSEITINPADLRIDT 231

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSA+RITH+P+G+VV CQ++RSQHKN+A+A  +L+A+L E E +K+
Sbjct: 232 YRASGAGGQHINKTDSAIRITHVPSGMVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQ 291

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +  A   ++ +  +G G    +IR+Y   P   + D R N+       VL+GDLD  ++
Sbjct: 292 QSAA--AQTRRLLVGSGDRSERIRTYNF-PQGRITDHRINLTLYRLEAVLEGDLDAVIE 347


>gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|20139356|sp|Q9KQ25|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047628|sp|A5F696|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790906|sp|C3LPI4|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3894-4]
          Length = 362

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 186/327 (56%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GD+   +   +
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIDPVI 347


>gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 355

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 190/337 (56%), Gaps = 17/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81
           L  K  DP +     E + LM+E  +L   +   +E + R+ + +     LL+  L+ED 
Sbjct: 15  LEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDLDEDF 73

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +++E  +  +  K  VE +    LL  +  D  +  +E+ AGAGG E+  +A  L RM
Sbjct: 74  EKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+   +S  
Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P V+D +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H PTG+V
Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315
           V CQ ERSQH N+ +A  +LRA+LY+    +Q++E    I    ++++G G    +IR+Y
Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R  +       VLDG+LD+ + A + 
Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691540|sp|B2SFF6|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 361

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/316 (37%), Positives = 182/316 (57%), Gaps = 15/316 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+       KLE 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           E + F  LL  +  D  + +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   
Sbjct: 97  ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+ 
Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEV 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +
Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           ML++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+     
Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331

Query: 336 SDVLDGDLDDFMKATL 351
            +V++G LD  ++  +
Sbjct: 332 DEVMEGSLDSIIQPLI 347


>gi|330828702|ref|YP_004391654.1| peptide chain release factor 1 [Aeromonas veronii B565]
 gi|328803838|gb|AEB49037.1| Peptide chain release factor 1 [Aeromonas veronii B565]
          Length = 362

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 181/309 (58%), Gaps = 11/309 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L RE   L++ +   +  + +  D+L   ++ LEEDD  + +   + L   K  +E  
Sbjct: 36  RALTREYAQLEDIVHAFQRYR-QAQDDLETTQMMLEEDDADLREMAQEELPLAKANLEAL 94

Query: 103 QFESLLSGEA----DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E  L        D N+ YLE+ AGAGG E+  +A  L RMY+R+AE++ ++   +  +
Sbjct: 95  EQELQLMLLPKDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           DGE  G K     I G   YG LK E G HR+ R+   +S  R HTS  ++ V P V ++
Sbjct: 155 DGEYGGYKEVIAKIDGERVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            +IEI+ SD +IDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A +
Sbjct: 215 EQIEINPSDLKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +L A+L   E ++    A    + +  +G G    +IR+Y   P   + + R N+     
Sbjct: 275 VLSARLQAAEDERHR--AAEQSTRRNLVGSGDRSERIRTYNY-PQGRLSEHRINLTLYRL 331

Query: 336 SDVLDGDLD 344
           S++L+GDLD
Sbjct: 332 SEILEGDLD 340


>gi|227355360|ref|ZP_03839761.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
 gi|227164584|gb|EEI49455.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
          Length = 360

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/244 (45%), Positives = 155/244 (63%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DEFNCFLEIRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   EIS SD RIDT
Sbjct: 167 IGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKR 286

Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +E     E+S+    +G G    +IR+Y   P   V D R N+      +V++G LD  +
Sbjct: 287 QE----AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALI 341

Query: 348 KATL 351
           +  +
Sbjct: 342 QPIV 345


>gi|197284958|ref|YP_002150830.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
 gi|238693176|sp|B4EVR7|RF1_PROMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194682445|emb|CAR42344.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
          Length = 360

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/244 (45%), Positives = 155/244 (63%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DEFNCFLEIRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   EIS SD RIDT
Sbjct: 167 IGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKR 286

Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +E     E+S+    +G G    +IR+Y   P   V D R N+      +V++G LD  +
Sbjct: 287 QE----AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALI 341

Query: 348 KATL 351
           +  +
Sbjct: 342 QPIV 345


>gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385]
 gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385]
          Length = 362

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 186/327 (56%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GD+   +   +
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLVDPVI 347


>gi|296327945|ref|ZP_06870480.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154901|gb|EFG95683.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 365

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I
Sbjct: 114 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 173

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 174 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDT 233

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 234 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 293

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 294 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 350

Query: 350 TLAI 353
            +  
Sbjct: 351 LITF 354


>gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009371|ref|ZP_02274302.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312095|ref|ZP_06802908.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|119361542|sp|Q2A1Q0|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361543|sp|Q0BKE8|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223558|sp|A7NE96|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223560|sp|A4IWC1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 361

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 181/313 (57%), Gaps = 15/313 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+       KLE 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           E + F  LL  +  D  + +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   
Sbjct: 97  ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+ 
Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEV 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +
Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           ML++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+     
Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331

Query: 336 SDVLDGDLDDFMK 348
            +V++G LD  ++
Sbjct: 332 DEVMEGSLDSIIQ 344


>gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
 gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
          Length = 360

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/246 (44%), Positives = 153/246 (62%), Gaps = 12/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  ++  L RMY+R+AEK+ ++ E L  ++GE  G K     +
Sbjct: 109 DGRNVYLEIRAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITHIPTG VV+CQ+ERSQHKN+A+A   L AK     LQ +
Sbjct: 229 YRSSGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAK-----LQDQ 283

Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++ A    I E+ K  +G G    +IR+Y   P   V D R N+   S ++V+ G ++  
Sbjct: 284 QDAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLNEVIAGGVEAV 342

Query: 347 MKATLA 352
           ++  LA
Sbjct: 343 IEPLLA 348


>gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223526|sp|A4SK64|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 362

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/309 (38%), Positives = 181/309 (58%), Gaps = 11/309 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L RE   L++ +   +  + +  +NL   +L LEEDD  + +   + L   K  +E +
Sbjct: 36  RALTREYAQLEDIVHAFQRFR-QAEENLEATKLMLEEDDADLREMAQEELPLAKSTLEEQ 94

Query: 103 ----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
               Q   L     D N+ YLE+ AGAGG E+  +A  L RMY+R+AE++ ++   +  +
Sbjct: 95  EQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRISIVSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           DGE  G K     + G + YG LK E G HR+ R+   +S  R HTS  ++ V P V ++
Sbjct: 155 DGEHGGYKEVIAKVDGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            +IEI+ +D +IDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A +
Sbjct: 215 EQIEINANDLKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +L A+L   E ++    A    + +  +G G    +IR+Y   P   + + R N+     
Sbjct: 275 VLSARLQAAEDERHR--AAEQSTRRNLVGSGDRSERIRTYNY-PQGRLSEHRINLTLYRL 331

Query: 336 SDVLDGDLD 344
            ++++GDLD
Sbjct: 332 GEIMEGDLD 340


>gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1]
 gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32]
 gi|166223604|sp|A4Y3J8|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223606|sp|A1RNE1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           W3-18-1]
 gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           putrefaciens CN-32]
 gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
          Length = 363

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 180/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L+  ++  K  Q    D     E+ LEEDD  + +   + ++  K E+E  
Sbjct: 36  RALSKEYSQLEEVVAGFKAYQQAQADLDSAKEM-LEEDDAEMREMAQEEMKAAKAELERL 94

Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E  +L    D ND   A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  ESELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQMEVMSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G  AYG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|307942489|ref|ZP_07657838.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
 gi|307774310|gb|EFO33522.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
          Length = 359

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/222 (48%), Positives = 142/222 (63%), Gaps = 7/222 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+NDA LEV AG GG E+  +A  L RMY R+AE   +K E L   +GE  G K     
Sbjct: 105 ADANDAILEVRAGTGGDEAALFAGDLFRMYQRFAELNGWKVEVLSASEGEVGGFKEVIAS 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++IEI+ESD RID
Sbjct: 165 VSGENVFARLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAED-VDIEINESDLRID 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T+RASGAGGQHVNTTDSAVRITH PTG+VV  Q ERSQHKNKA+A  +LRA++Y+ E  +
Sbjct: 224 TFRASGAGGQHVNTTDSAVRITHEPTGIVVAVQDERSQHKNKARAMQLLRARIYDEE--R 281

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
               +   E+ + ++G G    +IR+Y   P   V D R  +
Sbjct: 282 ARAASERTEARRVQVGSGDRSERIRTYNF-PQGRVTDHRIGL 322


>gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688740|sp|B1KSR1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 358

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 201/344 (58%), Gaps = 18/344 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  N  E + L +E   L+  ++  +E +    D    
Sbjct: 2   LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++ + L++E  + E ++L    D ND    ++E+ AGAGG 
Sbjct: 62  KEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVH
Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS
Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R       E  K+++G 
Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R  +        LDGD+D+ ++A
Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEA 341


>gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
 gi|166223548|sp|A7FQG2|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223549|sp|A5HY35|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
          Length = 358

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 201/344 (58%), Gaps = 18/344 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  N  E + L +E   L+  ++  +E +    D    
Sbjct: 2   LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++ + L++E  + E ++L    D ND    ++E+ AGAGG 
Sbjct: 62  KEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVH
Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS
Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R       E  K+++G 
Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R  +        LDGD+D+ ++A
Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEA 341


>gi|24375323|ref|NP_719366.1| peptide chain release factor 1 [Shewanella oneidensis MR-1]
 gi|32171552|sp|Q8EAR3|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24350136|gb|AAN56810.1|AE015816_7 peptide chain release factor 1 [Shewanella oneidensis MR-1]
          Length = 363

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 181/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L+  ++  K  Q    D     E+ LEEDD  + +   + ++  K+E+E  
Sbjct: 36  RALSKEYSQLEEVVAGFKAYQQAQADLESAKEM-LEEDDAEMREMAQEEIKAAKVELERL 94

Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E  +L    D ND   A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G  AYG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12]
 gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12]
          Length = 361

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 196/343 (57%), Gaps = 20/343 (5%)

Query: 17  DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           D+ +++L  L  + E       DP +  +    + L +E   L++ ++  K  Q +  ++
Sbjct: 3   DSVIRKLEGLLERNEEVLALLSDPGVISDQDRFRALSKEYSQLEDVVATFKAFQ-QATED 61

Query: 70  LILLELALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           L   +  L E+D  I +   + ++      +KLE E  Q   L     D N+A++E+ AG
Sbjct: 62  LDAAKEMLSENDPEIKEMAQEEMKDAKSIIVKLEDEL-QILLLPKDPNDDNNAFVEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMYTR+ E  +++TE +  ++GE  G K   + + G   YG LK E
Sbjct: 121 AGGDEAAIFAGDLYRMYTRYFETNRWQTEIMNANEGEHGGFKEVIIKVSGEGVYGRLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQHVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSA+R+THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + + 
Sbjct: 241 KTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEET--TRRN 298

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            +G G    +IR+Y   P   V D R N+     +DV++G+LD
Sbjct: 299 LVGSGDRSERIRTYNY-PQGRVSDHRINLTLYRLNDVMEGELD 340


>gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549]
          Length = 361

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E  + 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALKDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  +L    D ND    +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMK 348
           V++G LD  ++
Sbjct: 334 VMEGSLDSIIQ 344


>gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51]
 gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51]
          Length = 362

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 184/327 (56%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E      Q   L     D  + +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GD+   +   +
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIDPVI 347


>gi|312879994|ref|ZP_07739794.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
 gi|310783285|gb|EFQ23683.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
          Length = 357

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/342 (38%), Positives = 190/342 (55%), Gaps = 28/342 (8%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILL------ 73
            S + ++  DP L  N+ E   L +    L   ++ ++E   +  R+ D   LL      
Sbjct: 14  FSEIESRMVDPALSSNLQEMHALGKRHSELSPIVAALREYRGVLRRIQDARELLSQEDEG 73

Query: 74  --ELALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ELA EE   S L+E  + L QRIK+ +       L     D+ D  +E+ AGAGG E+
Sbjct: 74  LRELAKEE--LSTLEEQVEPLEQRIKVLL-------LPQDPNDAKDVVIEIRAGAGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE+  + +E L  +D    G K     +KG   Y  LK E GVHR+
Sbjct: 125 ALFAADLFRMYNRFAEREGWGSELLSTNDTGIGGYKEVVFHLKGTGVYSKLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS +++ V P  ++ +++++   D +IDTYRASGAGGQ+VN TDSAV
Sbjct: 185 QRIPVTEAGGRIHTSTATVAVLPEAEE-VDVQVRTEDLKIDTYRASGAGGQYVNMTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV CQ ERSQ KN+ +A  +LR +LY+LELQK++  A +    K ++G G 
Sbjct: 244 RITHVPTGLVVTCQDERSQLKNRVKAMQLLRTRLYDLELQKQQ--AVMAAERKGQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +IR+Y   P   + D R          VLDGDL + ++A
Sbjct: 302 RSERIRTYSY-PQNRLTDHRIGFTLYKLDQVLDGDLYELVEA 342


>gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
 gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
          Length = 360

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/280 (40%), Positives = 174/280 (62%), Gaps = 12/280 (4%)

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134
           DD S+ +   + ++  K E+E   +Q + LL  + D ND    YLE+ AG GG E+  +A
Sbjct: 70  DDLSMKEMAQEEIEECKAELEQVEQQLQILLLPK-DPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+     ++ +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQ--QQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1]
          Length = 361

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E  + 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQTAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  +L    D ND    +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMK 348
           V++G LD  ++
Sbjct: 334 VMEGSLDSIIQ 344


>gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3]
 gi|166223605|sp|A0KT88|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           ANA-3]
          Length = 363

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 180/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L+  ++  K  Q    D     E+ LEEDD  + +   + ++  K E+E  
Sbjct: 36  RALSKEYSQLEEVVAGFKAYQQAQADLESAKEM-LEEDDAEMREMAQEEIKAAKAELERL 94

Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E  +L    D ND   A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G  AYG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619]
 gi|229470352|sp|B1JEP6|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619]
          Length = 360

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 152/243 (62%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  G K     +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+ + IEI+ +D R+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    
Sbjct: 229 YRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +    I    K  +G G    +IR+Y   P   V D R N+   S  D+L G +D  ++ 
Sbjct: 289 QNA--IASERKLLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEP 345

Query: 350 TLA 352
            LA
Sbjct: 346 LLA 348


>gi|126701107|ref|YP_001090004.1| peptide chain release factor 1 [Clostridium difficile 630]
 gi|254977108|ref|ZP_05273580.1| peptide chain release factor 1 [Clostridium difficile QCD-66c26]
 gi|255094436|ref|ZP_05323914.1| peptide chain release factor 1 [Clostridium difficile CIP 107932]
 gi|255102693|ref|ZP_05331670.1| peptide chain release factor 1 [Clostridium difficile QCD-63q42]
 gi|255308514|ref|ZP_05352685.1| peptide chain release factor 1 [Clostridium difficile ATCC 43255]
 gi|255316188|ref|ZP_05357771.1| peptide chain release factor 1 [Clostridium difficile QCD-76w55]
 gi|255518849|ref|ZP_05386525.1| peptide chain release factor 1 [Clostridium difficile QCD-97b34]
 gi|255652028|ref|ZP_05398930.1| peptide chain release factor 1 [Clostridium difficile QCD-37x79]
 gi|255657438|ref|ZP_05402847.1| peptide chain release factor 1 [Clostridium difficile QCD-23m63]
 gi|260685003|ref|YP_003216288.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296449035|ref|ZP_06890825.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296879858|ref|ZP_06903831.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
 gi|306521770|ref|ZP_07408117.1| peptide chain release factor 1 [Clostridium difficile QCD-32g58]
 gi|119361524|sp|Q180Y2|RF1_CLOD6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115252544|emb|CAJ70387.1| Peptide chain release factor 1 (RF-1) [Clostridium difficile]
 gi|260211166|emb|CBA66621.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260214678|emb|CBE07314.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296262128|gb|EFH08933.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296429147|gb|EFH15021.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
          Length = 354

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/336 (38%), Positives = 185/336 (55%), Gaps = 31/336 (9%)

Query: 32  DPHLWQNVIEAK-------MLMRERQHLDNAISFIKEI----QDRLCDNLILLELALEED 80
           D  +WQ  I+         M  RE + + ++I   KEI     D     L  +ELA  E+
Sbjct: 27  DQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKESKEILQEESDEELRELAKMELAEMEE 86

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + L+E       IK+ +       L     D  +  +E+  GAGG E+  +A  L RM
Sbjct: 87  KVAPLEE------EIKILL-------LPKDPNDDKNVIVEIRGGAGGDEAALFAGDLFRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE+R++K E L   D    G K  + +IKG  AY  LK E GVHR+ RI   +S  
Sbjct: 134 YSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIPSTESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS S++ V P V+D +E+EI+ +D RID +R+SG GGQ VNTTDSAVR+THIPTG V
Sbjct: 194 RIHTSTSTVAVLPEVED-VEVEINPNDLRIDVFRSSGNGGQSVNTTDSAVRVTHIPTGEV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ  +SQ KNK QA  +L+A+LY+  L   E+  +I    K+++G G    +IR+Y  
Sbjct: 253 VSCQDGKSQLKNKEQALKILKARLYDKALA--EQHKDIAAERKSQVGTGDRSERIRTYNF 310

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            P   + D R N+        LDGD+D+ + A + +
Sbjct: 311 -PQGRISDHRINLTLYKLDAFLDGDIDEMIDALITV 345


>gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
 gi|119361507|sp|Q2GKS8|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
          Length = 359

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/245 (46%), Positives = 158/245 (64%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LE+ AG GG E+  +   L RMY ++AE++ +K E + I      G K A+  I
Sbjct: 108 DSRNAILEIRAGTGGEEAALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   +S+ R HTS +++ V P V++ ++++I E D RID 
Sbjct: 168 GGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLKIDEKDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QKR
Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
           EE   I +  K++IG G    +IR+Y  LQ    + D R N+       V+ +GDLD+F+
Sbjct: 287 EE--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINLTSYRLDYVMKEGDLDEFI 342

Query: 348 KATLA 352
            A +A
Sbjct: 343 DALVA 347


>gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
 gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
          Length = 361

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E  + 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  +L    D ND    +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMK 348
           V++G LD  ++
Sbjct: 334 VMEGSLDSIIQ 344


>gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 362

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 193/346 (55%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +    + L +E   L+      +  Q +  ++L+ 
Sbjct: 6   LVKLETLVERYEEVQHLLGDPDVLADQNRFRALSKEYSQLEEVTKCFQAYQ-QAKEDLVA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E   +EDD  + +   + ++  K E+E    E  +L    D ND    ++E+ AGAGG 
Sbjct: 65  AEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AE+R ++ E +  +  E+ G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A    + +  +G 
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R  +     ++V++GDLD  ++  L
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVL 347


>gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
 gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
          Length = 358

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/346 (37%), Positives = 199/346 (57%), Gaps = 21/346 (6%)

Query: 13  LFDW----DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDR 65
           +FD     D  V R + LN +  DP +  N  + + L++E   L   +S  +E   +  R
Sbjct: 1   MFDLTKKLDKLVDRYNELNKEISDPDVINNSEQYQKLLKEHGKLKEIVSKYREYKKVLSR 60

Query: 66  LCDNLILLELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   ++E   E++   +    L+E +   ++++ E+ Y     L     D  +  +E+
Sbjct: 61  VEEAHSIIEEEEEQEVRELAEMELKELTPRKEKMEDELTYML---LPEDPNDEKNVIVEI 117

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  +A  L RMY+R+AE + +KTE +  +     G K     ++G N Y  L
Sbjct: 118 RAGAGGDEAGLFAADLYRMYSRYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRL 177

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I  +D RID YR+SG GGQ
Sbjct: 178 KYESGVHRVQRVPTTESGGRIHTSTATVAVLPEAEE-VDVDIDPNDLRIDVYRSSGPGGQ 236

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH PTG+VV CQ E+SQHKNKA+A  +LRA+L   EL ++E+ A I E+
Sbjct: 237 SVNTTDSAVRITHEPTGLVVSCQDEKSQHKNKARAMRILRARLK--ELMEKEKQAEIDEA 294

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            K++IG G    +IR+Y   P   V D R N+     +D+LDG+LD
Sbjct: 295 RKSQIGSGDRSEKIRTYNF-PQGRVSDHRINLTIHQLNDILDGNLD 339


>gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
 gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
          Length = 360

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 152/243 (62%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG ES  +A  LLRMYTR+AEK ++K E +     E  G +   + +
Sbjct: 107 DGKNIYLEIRAGTGGDESALFAGDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   ++  R HTS  ++ V P  DD  ++ I+ +D R+DT
Sbjct: 167 VGKDVYSRLKFESGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNKAQA  +L A++ + ++Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQ-- 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   V D R N+       ++DGD+D+ + A
Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVSA 343

Query: 350 TLA 352
            +A
Sbjct: 344 LVA 346


>gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
          Length = 361

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E  + 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANETIEKLES 96

Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  +L    D ND    +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMK 348
           V++G LD  ++
Sbjct: 334 VMEGSLDSIIQ 344


>gi|262068281|ref|ZP_06027893.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
 gi|291378019|gb|EFE85537.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
          Length = 357

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE+RK+K E +E  DGE  G+K     I
Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|297172147|gb|ADI23128.1| protein chain release factor A [uncultured gamma proteobacterium
           HF0770_09E07]
          Length = 359

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 196/349 (56%), Gaps = 25/349 (7%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---------DRLC 67
           D+  ++   L+T+  DP L  ++ +   L +E   + + +      Q         D L 
Sbjct: 10  DSIQKKADDLSTQLSDPKLTSDINQLTKLNKEYSEIKDVVENWNRYQELEASIEDLDTLA 69

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            +  +  LALEE D     +    L++I+ E+     + L   + D  ++++E+ AGAGG
Sbjct: 70  KDEEMKSLALEEKD-----QNEKELEKIEAEI---MIQLLPKDKDDERNSFVELRAGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +   L RMY R+AE+ K+K E + EI  G   G K   + + G + YG LK E G
Sbjct: 122 DEAAIFVGDLYRMYGRFAERSKWKVEKIKEIPSGT-GGFKEIVIKVIGADTYGNLKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P +DD  E ++  S+ R+DTYRASGAGGQHVN T
Sbjct: 181 VHRVQRVPLTESQGRIHTSTATVAVLPEIDDIEEKDLDMSEIRVDTYRASGAGGQHVNKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+P+G+VV+CQ +RSQHKNKA+A  +L +K+Y++E QK E+        K+ +
Sbjct: 241 DSAVRLTHLPSGIVVECQDDRSQHKNKAKALGLLSSKIYDIEKQKIEQ--EKASERKSLV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   + D R  +   +    +DGD+D+ + +  A
Sbjct: 299 GTGDRSEKIRTYNF-PQGRITDHRLKLTLYNIDSFIDGDIDEMLNSLKA 346


>gi|119775698|ref|YP_928438.1| peptide chain release factor 1 [Shewanella amazonensis SB2B]
 gi|166223600|sp|A1S8R2|RF1_SHEAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119768198|gb|ABM00769.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           amazonensis SB2B]
          Length = 363

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 181/313 (57%), Gaps = 11/313 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ +   K  Q  + D     E+ LEEDD  + +   + ++  K  +E  
Sbjct: 36  RALSKEYAQLEDVVKGFKAYQQAVADLETAKEM-LEEDDPELKEMAQEEIKSAKASLERL 94

Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E  +L    D ND   A++E+ AGAGG E+  +A  L RMY+R+AE ++++ E +  +
Sbjct: 95  EAELQILLLPKDPNDEANAFVEIRAGAGGDEAAIFAGDLFRMYSRYAETQRWQVEIMSAN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K       G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGYKEVIARFSGERVYGKLKFESGGHRVQRVPETESQGRVHTSACTVAVLHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             +EI+ S+ RIDT+RASGAGGQHVN TDSA+RITH+PTG VV+CQ ERSQHKNKA+A +
Sbjct: 215 EAVEINPSELRIDTFRASGAGGQHVNKTDSAIRITHLPTGTVVECQDERSQHKNKARAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +L A+L   E +KR        + +  +G G    +IR+Y   P   V D R N+     
Sbjct: 275 VLVARLQAAEDEKRRSAE--ATTRRNLVGSGDRSERIRTYNF-PQGRVSDHRINLTLYRL 331

Query: 336 SDVLDGDLDDFMK 348
           ++V++GDL+  ++
Sbjct: 332 NEVMEGDLNALIE 344


>gi|238919470|ref|YP_002932985.1| peptide chain release factor 1 [Edwardsiella ictaluri 93-146]
 gi|259585221|sp|C5B814|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
           93-146]
          Length = 360

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     +
Sbjct: 107 DERDCFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   +I+ +D RIDT
Sbjct: 167 SGDGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G    ++R+Y   P   V D R N+      +V++G LD+ ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRVRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG]
 gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG]
          Length = 361

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E  + 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  +L    D ND    +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMK 348
           V++G LD  ++
Sbjct: 334 VMEGSLDSIIQ 344


>gi|221135300|ref|ZP_03561603.1| peptide chain release factor 1 [Glaciecola sp. HTCC2999]
          Length = 361

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R   +     DP +  +    + L +E   L++ +   ++ Q    D     E+ ++E
Sbjct: 13  VERFEEVQALLGDPDVIGDQNRFRSLSKEYAQLEDVVKSFRDYQGAQEDLASANEM-MQE 71

Query: 80  DDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + ++  K  +E      Q   L     D ++ +LE+ AGAGG E+  +A 
Sbjct: 72  DDAEMREMAQEEIKAAKASIETLEQALQILLLPRDPQDDSNCFLEIRAGAGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + ++ + +  ++GE  G K     I G  AYG +K E G HR+ R+  
Sbjct: 132 DLYRMYSRYAETKGWRVDLVSANEGEHGGYKEVIANIIGDGAYGVMKFESGGHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V   V +S  I+I+ +D R+DT+RASGAGGQHVN TDSA+RITHI
Sbjct: 192 TESQGRIHTSACTVAVLAEVAESEAIDINPADLRVDTFRASGAGGQHVNKTDSAIRITHI 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+GVVV+CQ ERSQHKN+A+A ++L+++L  +E +KR+  A    + K+ +G G    +I
Sbjct: 252 PSGVVVECQDERSQHKNRAKAMSVLQSRLNNIEKEKRD--AEEASTRKSLVGSGDRSERI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R+Y   P   V D R N+      DV+ GD+D  ++
Sbjct: 310 RTYNY-PQGRVTDHRINLTLYKLDDVVAGDVDALLE 344


>gi|253681032|ref|ZP_04861835.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
 gi|253562881|gb|EES92327.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
          Length = 357

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 194/335 (57%), Gaps = 15/335 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82
           L+ K  DP +  N  E + L +E   L+  ++  +E ++    L  N  LL    + D  
Sbjct: 15  LSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELESNKELLSEENDRDMK 74

Query: 83  SILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139
            ++QE    L+   ++ E E K    LL  +  D  + ++E+ AGAGG E+  +A  L R
Sbjct: 75  EMIQEEIKTLEENIVRDEEELKIL--LLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFR 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GVHR+ R+   +S+
Sbjct: 133 MYTRYAERHGWKTELMSTNETDIGGFKEVVFMLRGDSAYSKMKFESGVHRVQRVPDTESS 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P VDD ++I+I  +D R+D +RASG GGQ VNTTDSAVR+THIPTG+
Sbjct: 193 GRIHTSTATVAVLPEVDD-VDIQIDPNDIRVDVFRASGHGGQCVNTTDSAVRMTHIPTGI 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV CQ E+SQ KNK +A  +L+A+LY  E  + E  A+I    K+++G G    +IR+Y 
Sbjct: 252 VVSCQDEKSQLKNKEKALKVLKARLY--EKAEAERAASISADRKSQVGTGDRSERIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   V + R  +        LDGD+++ + A +
Sbjct: 310 Y-PQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALI 343


>gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
          Length = 360

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/294 (38%), Positives = 179/294 (60%), Gaps = 10/294 (3%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLE 120
           ++L  N+   EL L++ +   + E      ++++E   +Q + LL  + D ND    YLE
Sbjct: 56  NQLNSNIAEAELMLDDPEMKEMAEMEIEESKVEIEDVEQQLQILLLPK-DPNDEYNCYLE 114

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG 
Sbjct: 115 IRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQ 174

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGG
Sbjct: 175 LKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGG 234

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++  + A   +
Sbjct: 235 QHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER--QAAEQAD 292

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 293 TRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPII 345


>gi|253990004|ref|YP_003041360.1| peptide chain release factor 1 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781454|emb|CAQ84617.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica]
          Length = 360

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 107/235 (45%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY+R+AE R++K E +  +DGE  G K     +
Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKIEVMSANDGEHGGYKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   EIS SD RIDT
Sbjct: 167 SGEQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAELPEISPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +E        +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QEAE--ASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|307299656|ref|ZP_07579452.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306914708|gb|EFN45098.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 360

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/239 (45%), Positives = 152/239 (63%), Gaps = 7/239 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  +  +E+ AG GG E+  +A  L RMYTR+AE+  +K+E ++ ++ +  G K     
Sbjct: 105 ADERNIIIEIRAGTGGEEAALFAADLFRMYTRYAERNNWKSEIIDSNETDIGGFKEVIFQ 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G + +  LK E GVHR+ R+   +S  R HTS +++ V P V ++ E++I  +D RID
Sbjct: 165 IRGRSVFSKLKYESGVHRVQRVPTTESGGRIHTSTATVAVLPEVSET-EVKIDPADLRID 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVN TDSAVRI H PTG+VV  Q+ERSQH+NKA+A  +LRA+LYE+   K
Sbjct: 224 TYRSSGAGGQHVNKTDSAVRIVHEPTGIVVAVQKERSQHQNKARALEILRARLYEMYSSK 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            E    I E+ +T+IG G    +IR+Y   P   V D R N        V+DGDLD+ +
Sbjct: 284 AEN--EITEARRTQIGTGERSEKIRTYNF-PQNRVTDHRINFTSYRLLYVMDGDLDELV 339


>gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
 gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
          Length = 362

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/326 (37%), Positives = 185/326 (56%), Gaps = 17/326 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84
           DP +  N  + + L +E   L+   +  +  Q +  D+LI  E    EDD  +       
Sbjct: 25  DPDVIGNQDKFRALSKEYSQLEEVTNCFQAYQ-QAQDDLIAAEDMANEDDEEMREMAQEE 83

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++E  D ++R+  E+   Q   L     D  + +LE+ AGAGG E+  +A  L RMY+++
Sbjct: 84  IKEAKDAIERLTDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKY 140

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HT
Sbjct: 141 AEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ
Sbjct: 201 SACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
            ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y   P  
Sbjct: 261 DERSQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQG 317

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFM 347
            V D R N+     ++V++GDL   +
Sbjct: 318 RVSDHRINLTIYRLNEVMEGDLQSLI 343


>gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
 gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
          Length = 360

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 145/235 (61%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   DGE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    +    +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q--LAVASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|294782570|ref|ZP_06747896.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
 gi|294481211|gb|EFG28986.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
          Length = 357

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE+RK+K E +E  DGE  G+K     I
Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVIVDPKDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|237740336|ref|ZP_04570817.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
 gi|229422353|gb|EEO37400.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
          Length = 357

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  G+K     I
Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEVAFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|75497913|sp|Q5GSS8|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 359

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/252 (43%), Positives = 160/252 (63%), Gaps = 12/252 (4%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E DS +A LE+ AG GG E+  +A ML RMY ++AE+R +K E + I      G K
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYK 162

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+ LI G   +  LK E GVHR+ R+   +S+ R HTS +++ + P V++ ++ +I E 
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFKIEEK 221

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YR+SG GGQ VNTTDSAVR+TH+PT +VV  Q E+SQHKNKA+A  +LRA+LYE
Sbjct: 222 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYE 281

Query: 287 LELQKREEIANIGESS--KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-D 340
           +E QK+E    I  S+  K++IG G    +IR+Y   P   + D R N+       ++ +
Sbjct: 282 IERQKKE----IERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHQLEQIIKE 336

Query: 341 GDLDDFMKATLA 352
           G+LD+F++  ++
Sbjct: 337 GELDEFIEVLIS 348


>gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456401|ref|ZP_03664874.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|61214577|sp|Q5NIA8|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361541|sp|Q14JR1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct]
 gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 361

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 181/313 (57%), Gaps = 15/313 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99
           L +E  HL+  +   K+    L D     E+ L E D  +++   + L+       KLE 
Sbjct: 38  LSKEYSHLEPIVKAFKKYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           E + F  LL  +  D  + +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   
Sbjct: 97  ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+ 
Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEV 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +
Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           ML++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+     
Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331

Query: 336 SDVLDGDLDDFMK 348
            +V++G LD  ++
Sbjct: 332 DEVMEGSLDSIIQ 344


>gi|197120814|ref|YP_002132765.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
 gi|238689845|sp|B4UAY8|RF1_ANASK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|196170663|gb|ACG71636.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
          Length = 370

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 195/336 (58%), Gaps = 12/336 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR   L     DP +  N    + + +ER  ++  ++ ++  + +L +++   E  L + 
Sbjct: 15  QRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYR-KLLEDVEGNEALLADK 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +   + L +++ +VE  + +  L        D  D  +E+ AGAGG E+  +A  
Sbjct: 74  DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGLFAAE 133

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ R+   
Sbjct: 134 VMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQRVPAT 193

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  ++ I+++++ +D  +D +R++G+GGQ VNTTDSAVR+TH P
Sbjct: 194 EAQGRIHTSTVTVAVMPEAEE-IDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQQE+SQ KN+  A  MLRAKL+E+E Q+R+  A    + K+++G G    +IR
Sbjct: 253 TGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIE-QERQRSARDA-TRKSQVGTGDRSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   + D R N  + +   V+DGD+ D + A
Sbjct: 311 TYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDA 345


>gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223525|sp|A0KMZ8|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 362

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/309 (37%), Positives = 180/309 (58%), Gaps = 11/309 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L RE   L++ +   ++ + +  +NL      LEEDD  + +   + L   K   E +
Sbjct: 36  RALTREYAQLEDIVHAFQQFR-QAEENLDATRQMLEEDDADLREMAQEELPLAKATFEEQ 94

Query: 103 ----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
               Q   L     D N+ YLE+ AGAGG E+  +A  L RMY+R+AE++ ++   +  +
Sbjct: 95  EQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           DGE  G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P V ++
Sbjct: 155 DGEHGGYKEVIAKVEGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            +IEI+ S+ +IDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A +
Sbjct: 215 EQIEINPSELKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +L A+L   E ++    A    + +  +G G    +IR+Y   P   + + R N+     
Sbjct: 275 VLSARLQAAEDERHR--AAEQSTRRNLVGSGDRSERIRTYNY-PQGRLSEHRINLTLYRL 331

Query: 336 SDVLDGDLD 344
            ++++GDLD
Sbjct: 332 GEIMEGDLD 340


>gi|331082607|ref|ZP_08331730.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400226|gb|EGG79868.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 358

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 209/357 (58%), Gaps = 22/357 (6%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68
           +FD  ++ + RL  +  +  +P +  +    + LM+E+   Q + +A +  K  ++ + D
Sbjct: 1   MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124
           +L++L+   +E+   +L +E SD  +RI+   E +Q   +L    D ND     +E+ AG
Sbjct: 61  SLMMLDEESDEEMREMLKEELSDAKKRIE---ELEQELKILLLPKDPNDDKNVIVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  + RMY ++AE + ++TE L +++    G K  T +I G  AY  LK E
Sbjct: 118 AGGDEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ + P  ++ I+ E+  +DC+ D +RASG GGQ VN
Sbjct: 178 SGVHRVQRVPETESGGRIHTSTITVAIMPEAEE-IDFELDLNDCKFDVFRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LY++ELQKR +     E+ ++
Sbjct: 237 TTDSAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAE--AEARRS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD----LDDFMKATLAIK 354
           ++G G    +IR+Y   P   V D R  +       +++GD    +D+ + A  AI+
Sbjct: 295 QVGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEVIDNLIAADQAIR 350


>gi|239617233|ref|YP_002940555.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
 gi|239506064|gb|ACR79551.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
          Length = 361

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/273 (41%), Positives = 164/273 (60%), Gaps = 11/273 (4%)

Query: 86  QETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           +E   N+  ++ E+E  +      L+  E    D  +E+ AG GG E+  +A  L RMYT
Sbjct: 76  EEAEKNIAELQKEIEQIELNLKFLLIPDELGGKDIIVEIRAGTGGEEAALFAGDLFRMYT 135

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+AE+  +K E LE ++ +  G K  T  IKG + +  LK E GVHR+ R+   +S  R 
Sbjct: 136 RYAERNSWKVETLESNETDLGGFKEVTFQIKGKDVFRKLKYESGVHRVQRVPQTESGGRI 195

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS +++ V P   + +++ I  S+ RIDT+R+SGAGGQHVN T+SAVRI H+PTG+ V 
Sbjct: 196 HTSTATVAVLPKASE-VDVAIDPSELRIDTFRSSGAGGQHVNRTESAVRIVHLPTGITVT 254

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
            Q ERSQH+NKA+A  +LRA+LY L   ++E  + + +  +++IG G    +IR+Y   P
Sbjct: 255 VQSERSQHQNKARAMEILRARLYSLYRSQQE--STLSQQRRSQIGTGERSEKIRTYNF-P 311

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              V D R N       D+LDGDLD+ + A LA
Sbjct: 312 QNRVTDHRINYTTYRLQDILDGDLDELI-AKLA 343


>gi|304440460|ref|ZP_07400349.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371212|gb|EFM24829.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 355

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/283 (40%), Positives = 174/283 (61%), Gaps = 11/283 (3%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGE--ADSNDAYLEVHAGAGGTE 129
           EL  E+ D  +LQ   D+++ I+ E+E   ++ + LL  +   D+ +  +E+ AGAGG E
Sbjct: 63  ELLTEDLDDDMLQLVKDDIKNIEQELEKVTEELKRLLVPKDPNDNKNVIVEIRAGAGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +LLR Y  +AEK  FKT+ +  ++    G K    +I+G  AY  LK E GVHR
Sbjct: 123 AALFAGVLLRQYLMYAEKCGFKTDIMSTNEIGIGGYKEVVFMIEGKGAYSKLKYESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S+ R HTS +++ V P  +D +EIEI  SD R+D +R+SG GGQ VNTTDSA
Sbjct: 183 VQRVPETESSGRIHTSTATVAVLPEAED-VEIEIDPSDIRVDVFRSSGNGGQSVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+V+ CQ E+SQ KNK +A  +L+ KLY+LELQK+ +   +    +++IG G
Sbjct: 242 VRITHLPTGIVISCQDEKSQLKNKEKAMKILKTKLYDLELQKQAQ--ELSAEKRSQIGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +IR+Y   P   V D R  +       + +GDLD+ + A
Sbjct: 300 DRSERIRTYNY-PQGRVTDHRIGLTSHRIDAINNGDLDEIIDA 341


>gi|260589191|ref|ZP_05855104.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
 gi|260540272|gb|EEX20841.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
          Length = 358

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 209/357 (58%), Gaps = 22/357 (6%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68
           +FD  ++ + RL  +  +  +P +  +    + LM+E+   Q + +A +  K  ++ + D
Sbjct: 1   MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124
           +L++L+   +E+   +L +E SD  +RI+   E +Q   +L    D ND     +E+ AG
Sbjct: 61  SLMMLDEESDEEMREMLKEELSDAKKRIE---ELEQELKILLLPKDPNDDKNVIVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  + RMY ++AE + ++TE L +++    G K  T +I G  AY  LK E
Sbjct: 118 AGGDEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ + P  ++ I+ E+  +DC+ D +RASG GGQ VN
Sbjct: 178 SGVHRVQRVPETESGGRIHTSTITVAIMPEAEE-IDFELDLNDCKFDVFRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LY++ELQKR +     E+ ++
Sbjct: 237 TTDSAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAE--AEARRS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD----LDDFMKATLAIK 354
           ++G G    +IR+Y   P   V D R  +       +++GD    +D+ + A  AI+
Sbjct: 295 QVGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEIIDNLIAADQAIR 350


>gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
 gi|119361539|sp|Q2GGM5|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 359

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/260 (43%), Positives = 168/260 (64%), Gaps = 9/260 (3%)

Query: 98  EVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +V++K   SLL  + D + +A LE+ AG GG E+  +   L RMYT++AE++ +K E + 
Sbjct: 92  KVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQIN 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  G K  +L I G N +  LK E GVHR+ R+   +++ R HTS +++ V P ++
Sbjct: 152 SSSTGIGGHKEISLCISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + ++++I E D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQHKNK++A
Sbjct: 212 E-VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKA 270

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY LE QKR+  A I +  K++IG G    +IR+Y   P   + D R N+   
Sbjct: 271 LKVLRARLYNLEKQKRD--AEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLY 327

Query: 334 SPSDVL-DGDLDDFMKATLA 352
              D++ +G+LD+F++A +A
Sbjct: 328 RLDDIMKEGNLDEFIEALIA 347


>gi|295109135|emb|CBL23088.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           obeum A2-162]
          Length = 358

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 192/328 (58%), Gaps = 11/328 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSIL-QE 87
           +P +  N    + LM+E+  L   +   KE ++    + D+L +LE   +E+   +L +E
Sbjct: 21  EPGVTDNQDRFQKLMKEQSELQPIVDTYKEYKENKETIQDSLSMLEEEKDEEMREMLKEE 80

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            SD  +R++   +  +   L     DS +  +E+ AGAGG E+  +A  + RMY ++AE 
Sbjct: 81  LSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGGDEAALFAAEIYRMYVKYAES 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R++KTE + +++    G K  T +I+G  AY  LK E GVHR+ R+   +S  R HTS  
Sbjct: 141 RRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTC 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ + P  ++ I+  +  +DC+ D +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+
Sbjct: 201 TVAIMPEAEE-IDFHLDMNDCKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEK 259

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQ KNK +A  +LR++LYE+EL K+ +     E+ +++IG G    +IR+Y   P   V 
Sbjct: 260 SQLKNKDKALKVLRSRLYEMELAKQHDAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVT 316

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           D R  +       +L GDLD+ + + +A
Sbjct: 317 DHRIKLTLHRLDAILGGDLDEILDSLIA 344


>gi|304410657|ref|ZP_07392275.1| peptide chain release factor 1 [Shewanella baltica OS183]
 gi|304351141|gb|EFM15541.1| peptide chain release factor 1 [Shewanella baltica OS183]
          Length = 363

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 182/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ ++  K  Q    D     E+ LEEDD  + +   + ++  K ++E+ 
Sbjct: 36  RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94

Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E    LL  + D + +A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  LE +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQALEDEKRRSAEETTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|84394465|ref|ZP_00993179.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
 gi|84374906|gb|EAP91839.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
          Length = 362

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  N  + + L +E   L+      K  Q +  ++L  
Sbjct: 6   LIKLETLVERYEEVQHLLGDPGVLGNQDKFRALSKEYSQLEEVTGCFKSYQ-QAQEDLEA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E    EDD  + +   + ++  K  +E    E  +L    D ND    +LE+ AGAGG 
Sbjct: 65  AEEMANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AEK+ ++ E +  +  E+ G K     I G   YG +K E G H
Sbjct: 125 EAGIFAGNLFRMYSRFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI   D +IDT+RASGAGGQHVNTTDS
Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     ++VL+GD+   +   L
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVL 347


>gi|323452428|gb|EGB08302.1| hypothetical protein AURANDRAFT_13671 [Aureococcus anophagefferens]
          Length = 235

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 149/233 (63%), Gaps = 9/233 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E+ ++G  D  D  LE+ AGAGG ++Q+W  M+ RMY R+ EKR F     E  +G+ 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 163 AG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIE 220
            G +K  +L I+G NA+G  +GE+G HRLVR SP++S ++R TSF+S+   P + DD  +
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 221 I-----EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +     E+  +D  + T RA GAGGQ+VN  ++AVR+TH+PTG+ V+C +ER+Q  NKA 
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRVTHVPTGLRVRCARERTQGANKAI 180

Query: 276 AWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           A  MLRAKL   +  Q+   +A+I    +    +G  +RSYVL PY++VKD R
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADI-RGDRVAADFGASVRSYVLHPYKLVKDDR 232


>gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
 gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
          Length = 361

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/234 (45%), Positives = 149/234 (63%), Gaps = 6/234 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N+ +LEV AG GG E+  +A  L RMY+R+AE +K+K E +  ++GE  G K     I
Sbjct: 109 DNNNVFLEVRAGTGGDEAAIFAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   +S  R HTS  ++ V   V ++  IEI+ +D ++DT
Sbjct: 169 SGEGVYGQLKFESGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
              A      +  +G G    +IR+Y   P   + D R N+     ++V+ GDL
Sbjct: 289 H--AAEASERRNLVGSGDRSERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339


>gi|219856616|ref|YP_002473738.1| hypothetical protein CKR_3273 [Clostridium kluyveri NBRC 12016]
 gi|219570340|dbj|BAH08324.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 367

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 199/347 (57%), Gaps = 18/347 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  +  + + L +E   L+  +   +E ++ L D    
Sbjct: 12  LERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDN 71

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++R+   +E ++ E  +L    D ND    ++E+  GAGG 
Sbjct: 72  KEMLREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGE 131

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE + +K E + +   +  G K    ++KG +AY  LK E G H
Sbjct: 132 EAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTH 191

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I ++++D RID +RASG GGQ VNTTDS
Sbjct: 192 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDIVVNQNDIRIDVFRASGHGGQCVNTTDS 250

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+++LYE   ++R   A+I E  K ++G 
Sbjct: 251 AVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN--ASIAEDRKNQVGT 308

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   V D R  +        L+GD+D+ + A + 
Sbjct: 309 GDRSERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALIT 354


>gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
 gi|226739103|sp|B8E003|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
          Length = 367

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 180/310 (58%), Gaps = 11/310 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L++ER  ++  +   +E +  L +   L E+  EE D  +       L+ I+ ++E  +F
Sbjct: 39  LLKERAKIEEIVDKFREYKRLLKEKEDLEEMVKEEQDEDLRSLAETELEDIQEKLEKVEF 98

Query: 105 E-SLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E   L    D ND     +E+ AG GG E+  +A  L RMY  +A+K+ +K E +  +  
Sbjct: 99  ELKALLLPKDPNDEKNIIMEIRAGTGGEEAALFAADLFRMYLGYAQKKGWKVEIVSSNPT 158

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
              G K    +++G  AY  LK E GVHR+ R+   +S+ R HTS +++ V P +++ IE
Sbjct: 159 GLGGFKEIIFIVEGKGAYSRLKFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEE-IE 217

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI   D RI+T+R+ GAGGQHVN T+S VRITHIP+G+VVQCQ ERSQH+N+ +A  +L
Sbjct: 218 VEIDPKDLRIETFRSGGAGGQHVNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVL 277

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           RA+LY  E  +RE+   I    + ++G G    +IR+Y   P + V D R N       +
Sbjct: 278 RARLY--EYYQREKENEIASQRRQQVGTGERSEKIRTYNF-PQRRVTDHRINYSSFQLEE 334

Query: 338 VLDGDLDDFM 347
           VL G+LD+F+
Sbjct: 335 VLSGELDEFI 344


>gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 360

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 24/315 (7%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L++ +  L+ A + +K+       +  + E+A+EE     ++ET + L  + LE + +
Sbjct: 53  KQLLKVQADLEGAQALLKD------SDPDMREMAVEE-----VRETKEQL--VDLEAQLQ 99

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           +   LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE
Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   I
Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L 
Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277

Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           AKL +   Q+    AN I    K  +G G    +IR+Y   P   V D R N+   S  +
Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDE 333

Query: 338 VLDGDLDDFMKATLA 352
           VL G +D  ++  LA
Sbjct: 334 VLAGGVDAVIEPLLA 348


>gi|153956299|ref|YP_001397064.1| peptide chain release factor 1 [Clostridium kluyveri DSM 555]
 gi|189039965|sp|A5N3J7|RF1_CLOK5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146349157|gb|EDK35693.1| PrfA [Clostridium kluyveri DSM 555]
          Length = 357

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 199/347 (57%), Gaps = 18/347 (5%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL+F+  K E       DP +  +  + + L +E   L+  +   +E ++ L D    
Sbjct: 2   LERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDN 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E+  EE D  + +   + ++R+   +E ++ E  +L    D ND    ++E+  GAGG 
Sbjct: 62  KEMLREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGE 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE + +K E + +   +  G K    ++KG +AY  LK E G H
Sbjct: 122 EAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++I ++++D RID +RASG GGQ VNTTDS
Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDIVVNQNDIRIDVFRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KNK +A  +L+++LYE   ++R   A+I E  K ++G 
Sbjct: 241 AVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN--ASIAEDRKNQVGT 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   V D R  +        L+GD+D+ + A + 
Sbjct: 299 GDRSERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALIT 344


>gi|170717669|ref|YP_001784745.1| peptide chain release factor 1 [Haemophilus somnus 2336]
 gi|189039976|sp|B0UUE6|RF1_HAES2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168825798|gb|ACA31169.1| peptide chain release factor 1 [Haemophilus somnus 2336]
          Length = 360

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/292 (40%), Positives = 179/292 (61%), Gaps = 10/292 (3%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L +N+   +L L++ D   + E      + ++E   +Q + LL  + D ND   AYLE+ 
Sbjct: 58  LNNNIEETQLLLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPK-DPNDEYNAYLEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS  ++ V P + ++   EI+ SD RIDTYR+SGAGGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQH 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E Q+R+  A   ++ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAE-QERQAQAQ-ADTR 294

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|19704667|ref|NP_604229.1| peptide chain release factor 1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22096034|sp|Q8R5W0|RF1_FUSNN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19714975|gb|AAL95528.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 365

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  G+K     I
Sbjct: 114 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEIAFTI 173

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDT
Sbjct: 174 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDT 233

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+
Sbjct: 234 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 293

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A
Sbjct: 294 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 350

Query: 350 TLAI 353
            +  
Sbjct: 351 LITF 354


>gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
 gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
          Length = 355

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/338 (37%), Positives = 190/338 (56%), Gaps = 19/338 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81
           L  K  DP +     E + LM+E  +L   +   +E + R+ + +     LL+  ++ED 
Sbjct: 15  LEKKIADPDIISQTQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDIDEDF 73

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
             +++E   N  + + E+  +  + LL      D  +  +E+ AGAGG E+  +A  L R
Sbjct: 74  EKLVKEEL-NWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFR 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+   +S 
Sbjct: 133 MYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESG 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P V+D IE+EI E D  IDT+RA GAGGQHVN T+SAVRI H PTG+
Sbjct: 193 GRIHTSTATVAVLPEVED-IEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGI 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRS 314
           VV CQ ERSQH N+ +A  +LRA+LY+    LQ++E    I    ++++G G    +IR+
Sbjct: 252 VVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKE----IESQRRSQVGTGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           Y   P   V D R  +       VLDG+LD+ + A + 
Sbjct: 308 YNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|113461093|ref|YP_719161.1| peptide chain release factor 1 [Haemophilus somnus 129PT]
 gi|119361547|sp|Q0I3B5|RF1_HAES1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112823136|gb|ABI25225.1| bacterial peptide chain release factor 1 (bRF-1) [Haemophilus
           somnus 129PT]
          Length = 360

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/292 (40%), Positives = 179/292 (61%), Gaps = 10/292 (3%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L +N+   +L L++ D   + E      + ++E   +Q + LL  + D ND   AYLE+ 
Sbjct: 58  LNNNIEETQLLLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPK-DPNDEYNAYLEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK
Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS  ++ V P + ++   EI+ SD RIDTYR+SGAGGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQH 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E Q+R+  A   ++ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAE-QERQAQAQ-ADTR 294

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|168185914|ref|ZP_02620549.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
 gi|169296113|gb|EDS78246.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
          Length = 357

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 192/333 (57%), Gaps = 11/333 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALEEDDC 82
           L+ K  DP +  N  E + L +E   L+  ++  +E +   + L  N  +L    ++D  
Sbjct: 15  LSIKISDPSVMANQNEWRKLCKEHSELETIVTKYREYKGNKEELEANKEMLSEETDKDMK 74

Query: 83  SILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            ++QE    L+  I  + E  +   L     D  + ++E+ AGAGG E+  +A  L RMY
Sbjct: 75  EMIQEEIKTLEENIVTDEEELKILLLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFRMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GVHR+ R+   +S+ R
Sbjct: 135 TRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGVHRVQRVPDTESSGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P VDD ++I+I  +D R+D +RASG GGQ VNTTDSAVR+THIPTG+VV
Sbjct: 195 IHTSTATVAVLPEVDD-VDIQIDPNDIRVDVFRASGHGGQCVNTTDSAVRMTHIPTGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQ KNK +A  +L+A+LYE    +R   A+I    K+++G G    +IR+Y   
Sbjct: 254 SCQDEKSQLKNKEKAMKVLKARLYEKAEAERS--ASISADRKSQVGTGDRSERIRTYNY- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           P   V + R  +        LDGD+++ + A +
Sbjct: 311 PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALI 343


>gi|71281852|ref|YP_270226.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
 gi|119361527|sp|Q47Y94|RF1_COLP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71147592|gb|AAZ28065.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
          Length = 362

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 188/337 (55%), Gaps = 7/337 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R   +     DP    +  + + L +E + LD   S     +    D+    EL L++
Sbjct: 13  VERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKS-AEDDFSTAELMLKD 71

Query: 80  DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   +  +  K  V    +  Q   L     D N+ ++E+ AGAGG E+  +A 
Sbjct: 72  DDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AEK+ +K E +  ++ E+ G K   + + G   +G +K E G HR+ R+  
Sbjct: 132 DLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHRVQRVPA 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN TDSA+RITHI
Sbjct: 192 TESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHI 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRS 314
           PTGVVV+CQ++RSQHKN+AQA ++L+A+L + E +KR         +    G    +IR+
Sbjct: 252 PTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDRSERIRT 311

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   + D R N+     +++++G L   M+  +
Sbjct: 312 YNF-PQGRMSDHRINLTLYRLNEIMEGSLQLVMEPIM 347


>gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
 gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           K40]
 gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
          Length = 360

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 186/315 (59%), Gaps = 24/315 (7%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + +
Sbjct: 53  KQLARVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQ 99

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           +   LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE
Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   I
Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L 
Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277

Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           AKL +   Q+    AN I    K  +G G    +IR+Y   P   V D R N+   S  +
Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDE 333

Query: 338 VLDGDLDDFMKATLA 352
           VL G +D  ++  LA
Sbjct: 334 VLAGGVDAVIEPLLA 348


>gi|300853434|ref|YP_003778418.1| peptide chain release factor 1 [Clostridium ljungdahlii DSM 13528]
 gi|300433549|gb|ADK13316.1| peptide chain release factor 1 (RF-1) [Clostridium ljungdahlii DSM
           13528]
          Length = 357

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 200/350 (57%), Gaps = 24/350 (6%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDN 69
           ++RL+F+  K E       DP +  +  E + L +E   L+  ++  +E    Q  L DN
Sbjct: 2   LERLNFIENKYEELSIKISDPQVMADQKEWQKLCKENAELEEIVTKYREYKKAQQELEDN 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGA 125
             +L+   EE D  + +   + ++R+   +E  + +  +L    D ND    ++E+ AGA
Sbjct: 62  KEMLK---EETDREMKEMEQEEIKRLTEVIEESENDLRVLLLPKDPNDDKNVFVEIRAGA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMYTR+AE++ +  E + I+  +  G K    ++KG  AY  LK E 
Sbjct: 119 GGEEAALFAANLTRMYTRYAERQAWNIETMSINATDIGGFKEIVFMVKGKGAYSRLKYES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S+ R HTS +++ V P VDD +++ I+ +D RID +RASG GGQ VNT
Sbjct: 179 GTHRVQRVPDTESSGRIHTSTATVAVLPEVDD-VDVVINPNDIRIDVFRASGHGGQCVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV CQ E+SQ KNK +   +L+++LY  E  ++E  A+I E  K++
Sbjct: 238 TDSAVRITHLPTGLVVSCQDEKSQLKNKEKGMKVLKSRLY--ERAEKERSASIAEDRKSQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G G    +IR+Y   P   V D R  +        LDG++D+ + A + 
Sbjct: 296 VGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGNIDEIIDALIT 344


>gi|157363244|ref|YP_001470011.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
 gi|157313848|gb|ABV32947.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
          Length = 347

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 107/256 (41%), Positives = 155/256 (60%), Gaps = 14/256 (5%)

Query: 102 KQFESLLS-------GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           KQ+E ++S          + N+   E+ AG GG E+  +A  L RMY R+AE++ ++ E 
Sbjct: 82  KQYEDIISQLISHLLPFEEHNNVIFEIRAGTGGEEAALFAADLYRMYIRYAERKGWQVEL 141

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
            + HD    G K     +KG +AY +LK E GVHR+ R+   +S+ R HTS +++ V P 
Sbjct: 142 SDFHDTGLGGFKEIVFFVKGKSAYKYLKYESGVHRVQRVPVTESSGRIHTSTATVAVLPE 201

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V D +EI I   D +IDT++ASG GGQ+VN T+SAVRITH+PTG++V CQ ERSQH+N+ 
Sbjct: 202 VSD-VEIHIDPKDLKIDTFKASGHGGQYVNKTESAVRITHLPTGIIVSCQSERSQHQNRE 260

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +LRAKLYE+E +K    + +    K +IG      +IR+Y   P   V D R N  
Sbjct: 261 RALVILRAKLYEIEQEKIN--SQLSNQRKNQIGSAERSEKIRTYNF-PQNRVTDHRINYT 317

Query: 332 KTSPSDVLDGDLDDFM 347
                ++LDGDLD+ +
Sbjct: 318 TYRLQEILDGDLDELI 333


>gi|49475009|ref|YP_033050.1| peptide chain release factor 1 [Bartonella henselae str. Houston-1]
 gi|61214620|sp|Q6G5T7|RF1_BARHE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49237814|emb|CAF27009.1| Peptide chain release factor 1 [Bartonella henselae str. Houston-1]
          Length = 359

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/244 (45%), Positives = 153/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A +E+ AG GG+E+  +A  L RMY R+A  R +K E + +++GE  G K     
Sbjct: 107 ADEKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ RI   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ISGRGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E       S K+++G G    +IR+Y   P   V D R N+       VL+GDLD+ + 
Sbjct: 285 AEN--ERSASRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVLEGDLDELIH 341

Query: 349 ATLA 352
           A ++
Sbjct: 342 ALIS 345


>gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99]
 gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99]
          Length = 361

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 196/343 (57%), Gaps = 20/343 (5%)

Query: 17  DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           D+ +++L  L  + E       DP +  +    + L +E   L++ ++  K  Q +  ++
Sbjct: 3   DSVIRKLEGLLERNEEVLALLSDPGIIADQTRFRALSKEYSQLEDVVAAFKGFQ-QATED 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAG 124
           L   +  L E+D  I Q   + ++  K     LE E  Q   L     D N+A++E+ AG
Sbjct: 62  LDAAKEMLSENDPEIKQMAQEEMKEAKSLIKKLEDEL-QILLLPKDPNDDNNAFVEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+ E  +++TE +  ++GE  G K   + + G   YG LK E
Sbjct: 121 AGGDEAAIFAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVYGRLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN
Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLVEVPEAEAIKINPADLKVDTFRASGAGGQHVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSA+R+THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR  +     + + 
Sbjct: 241 KTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSVEET--TRRN 298

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            +G G    +IR+Y   P   V D R N+     +++++G+LD
Sbjct: 299 LVGSGDRSERIRTYNY-PQGRVSDHRINLTLYRLNEIMEGELD 340


>gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
 gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
          Length = 356

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 157/242 (64%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I
Sbjct: 105 DEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   ++  R HTS +++ V P V++ +++EI+ +D RID 
Sbjct: 165 SGKGAYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPNDIRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ G GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ++
Sbjct: 224 FRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   I E+ K+++G G    +IR+Y   P   V D R  +      +VLDGDLD+ + A
Sbjct: 284 QK--EIAEARKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDA 340

Query: 350 TL 351
            +
Sbjct: 341 LI 342


>gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel]
 gi|75432752|sp|Q5FGZ2|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81557311|sp|Q5HB80|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden]
 gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 359

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/266 (42%), Positives = 169/266 (63%), Gaps = 9/266 (3%)

Query: 92  LQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           LQ+   +V++K   SLL  + D + +A LE+ AG GG E+  +   L RMY ++AEK+ +
Sbjct: 86  LQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYIKYAEKKNW 145

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E +        G K  +L + G N +  LK E GVHR+ R+   +++ R HTS +++ 
Sbjct: 146 KIEQINSSSTGIGGHKEVSLCVSGSNVFAKLKFESGVHRVQRVPETEASGRLHTSAATVA 205

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P +++ ++++I E D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQH
Sbjct: 206 VLPEIEE-VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQH 264

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
           KNK +A  +LRA+LY+LE QKR+  A I +  K++IG G    +IR+Y   P   + D R
Sbjct: 265 KNKNKALKVLRARLYDLEKQKRD--AEISQLRKSQIGSGDRSERIRTYNF-PQSRITDHR 321

Query: 328 TNIEKTSPSDVL-DGDLDDFMKATLA 352
            N+      D++ +GDLD+ ++A +A
Sbjct: 322 INLTLYRLEDIMKEGDLDELIEALIA 347


>gi|257467857|ref|ZP_05631953.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185]
 gi|317062146|ref|ZP_07926631.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
 gi|313687822|gb|EFS24657.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
          Length = 358

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/246 (42%), Positives = 149/246 (60%), Gaps = 6/246 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +  +E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  +    GIK A  
Sbjct: 104 ENDDKNVIIEIRGGAGGDEAALFAGNLFRMYSRYAERKKWKMEIIEKQEMGIGGIKEAVF 163

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V+D  E++I   D +I
Sbjct: 164 SINGFGAYSRLKFESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYR+ GAGGQHVN TDSAVRITH+PTG++VQCQ ERSQ KN+ +A   L +KL+E+E +
Sbjct: 224 DTYRSGGAGGQHVNMTDSAVRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECE 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           K+   + +    + ++G G    +IR+Y   P   + D R           LDGDLD+ +
Sbjct: 284 KQR--SQVESERRLQVGTGDRSEKIRTYNY-PQGRITDHRIKFTVYQLEAYLDGDLDEMI 340

Query: 348 KATLAI 353
            A +  
Sbjct: 341 DALITF 346


>gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804]
 gi|229470349|sp|A9IER8|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii]
          Length = 360

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/337 (36%), Positives = 185/337 (54%), Gaps = 11/337 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  ++    +P    ++   + L RER  L+  +    +   R  D+L   +  L + D
Sbjct: 15  RLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFA-RTEDDLATAQEMLADPD 73

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138
              + E      R +LE    + + LL    D ND    +LE+ AG GG ES  ++  LL
Sbjct: 74  MKAMAEDEIKTGRERLEKLESELQVLLLPR-DPNDGRSLFLEIRAGTGGDESALFSGDLL 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY+R+AE+R ++ E +     E  G K     I G  AYG LK E G HR+ R+   ++
Sbjct: 133 RMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPATEA 192

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P  D   +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG
Sbjct: 193 QGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKTDSAVRITHLPTG 252

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV+CQ +RSQH+NK +A  +L A+L + EL++R+  +      K+ +G G    +IR+Y
Sbjct: 253 LVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQ--SKEAAERKSLVGSGDRSERIRTY 310

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R N+       +++GDL++   A +A
Sbjct: 311 NF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 346


>gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400]
 gi|119361604|sp|Q087I4|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           frigidimarina NCIMB 400]
          Length = 361

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/305 (38%), Positives = 178/305 (58%), Gaps = 7/305 (2%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYK 102
           L +E   L++ +S  K  Q    D     E+ LEEDD  + +   D  ++ K  LE    
Sbjct: 38  LSKEYSQLEDVVSSFKAFQQAQKDFDYAKEM-LEEDDLEMREMAQDEYKQSKQVLEKLED 96

Query: 103 QFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           + + LL  +   D  +A+LE+ AGAGG E+  +A  L RMY+R+ E  +++ E + +++G
Sbjct: 97  ELQVLLLPTDPNDDTNAFLEIRAGAGGDEAAIFAGDLYRMYSRYCEANRWQMEVMNVNEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K   + I G  AYG LK E G HR+ R+   +S  R HTS  ++ V   V ++  
Sbjct: 157 EHGGFKEIIVKISGDGAYGKLKFESGGHRVQRVPETESQGRVHTSACTVVVLHEVPEAEA 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I I+ +D ++DT+RASGAGGQHVN TDSA+RITHIP+G++V+CQ +RSQHKN+AQA ++L
Sbjct: 217 ISINAADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMSVL 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
            A++  +E +KR         S    G    +IR+Y   P   V D R N+     ++V+
Sbjct: 277 AARIQAVEDEKRRSAEETTRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTLYRLNEVM 335

Query: 340 DGDLD 344
           +GDL+
Sbjct: 336 EGDLN 340


>gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
 gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
          Length = 362

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 192/346 (55%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +    + L +E   L+      +  Q +  ++L+ 
Sbjct: 6   LVKLETLVERYEEVQHLLGDPSVLADQNRFRALSKEYSQLEEVTKCFQAYQ-QAKEDLVA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E   +EDD  + +   + ++  K E+E    E  +L    D ND    ++E+ AGAGG 
Sbjct: 65  AEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AE+R ++ E +  +  E+ G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A    + +  +G 
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRN--AEEASTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R  +     ++V++GDLD  ++   
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVF 347


>gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           642]
          Length = 360

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + ++ 
Sbjct: 55  LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101

Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  
Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI
Sbjct: 160 GYKEVIARVEGESVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK
Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279

Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L +   Q+    AN I    K  +G G    +IR+Y   P   V D R N+   S  +VL
Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335

Query: 340 DGDLDDFMKATLA 352
            G +D  ++  LA
Sbjct: 336 AGGVDAVIEPLLA 348


>gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida U112]
 gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
 gi|166223559|sp|A0Q844|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112]
 gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
          Length = 361

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 178/311 (57%), Gaps = 11/311 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E  + 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96

Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  +L    D ND    +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A  ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMLML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K+ +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMK 348
           V++G LD  ++
Sbjct: 334 VMEGSLDSIIQ 344


>gi|241667853|ref|ZP_04755431.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 361

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 11/314 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E  + 
Sbjct: 38  LSKEYSHLEPIVKAFKEYTQALEDKEAAYEM-LNEKDAELVEMAKEELKSANESIERLED 96

Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  +L    D ND    +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANIFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K  +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKNLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMKATL 351
           V++G LD  ++  +
Sbjct: 334 VMEGSLDSIIQPLI 347


>gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 311

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/260 (43%), Positives = 168/260 (64%), Gaps = 9/260 (3%)

Query: 98  EVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +V++K   SLL  + D + +A LE+ AG GG E+  +   L RMYT++AE++ +K E + 
Sbjct: 44  KVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQIN 103

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  G K  +L I G N +  LK E GVHR+ R+   +++ R HTS +++ V P ++
Sbjct: 104 SSSTGIGGHKEISLCISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIE 163

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + ++++I E D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQHKNK++A
Sbjct: 164 E-VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKA 222

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY LE QKR+  A I +  K++IG G    +IR+Y   P   + D R N+   
Sbjct: 223 LKVLRARLYNLEKQKRD--AEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLY 279

Query: 334 SPSDVL-DGDLDDFMKATLA 352
              D++ +G+LD+F++A +A
Sbjct: 280 RLDDIMKEGNLDEFIEALIA 299


>gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 360

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/294 (38%), Positives = 178/294 (60%), Gaps = 10/294 (3%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLE 120
           ++L  N+   EL L++ +   + E      + ++E   +Q + LL  + D ND    YLE
Sbjct: 56  NQLNSNIAEAELMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPK-DPNDEYNCYLE 114

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG 
Sbjct: 115 IRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQ 174

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGG
Sbjct: 175 LKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGG 234

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++  + A   +
Sbjct: 235 QHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER--QAAEQAD 292

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 293 TRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPII 345


>gi|307304754|ref|ZP_07584504.1| peptide chain release factor 1 [Shewanella baltica BA175]
 gi|306912156|gb|EFN42580.1| peptide chain release factor 1 [Shewanella baltica BA175]
          Length = 363

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 182/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ ++  K  Q    D     E+ LEEDD  + +   + ++  K ++E+ 
Sbjct: 36  RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94

Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E    LL  + D + +A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  LE +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQALEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|238783270|ref|ZP_04627295.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
 gi|238715863|gb|EEQ07850.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
          Length = 360

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 149/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGEGAFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155]
 gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223]
 gi|166223601|sp|A3D0G1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790896|sp|B8E815|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           baltica OS155]
 gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223]
          Length = 363

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 182/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ ++  K  Q    D     E+ LEEDD  + +   + ++  K ++E+ 
Sbjct: 36  RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94

Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E    LL  + D + +A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  LE +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQALEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|257066246|ref|YP_003152502.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
 gi|256798126|gb|ACV28781.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
          Length = 358

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/334 (37%), Positives = 188/334 (56%), Gaps = 11/334 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  DP +  ++ +   + RE   L   +    EI+D         EL  E DD  ++
Sbjct: 15  LEKKMIDPDVLADISKLTKITREYNSLKPIVEKYDEIKDSESTIAENKELIGEADDQDMV 74

Query: 86  QETSDNL-QRIKLEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
           +   D + +  KL  +YK+   +L       DS D  +E+  GAGG E+  +A  L RMY
Sbjct: 75  EMLKDEIKENEKLLEKYKEEMKILLIPKDPNDSRDVIVEIRPGAGGDEAGLFAGDLYRMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
             +A+K  +KTE +E+      GIK AT +I+G  AY   K E GVHR+ R+   +S  R
Sbjct: 135 HMYADKEGYKTEDVEVSSQGVGGIKEATFMIRGEGAYSRFKYESGVHRVQRVPETESGGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P VD+ +++E+  +D R D +R+SG GGQ VNTTDSAVR+THIPTG+VV
Sbjct: 195 IHTSTATVAVLPEVDE-VDVELDPNDIRTDVFRSSGNGGQSVNTTDSAVRLTHIPTGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
             Q E+SQ KNK +A  +L A++YELE +KR +   I ++ K+++G G    +IR+Y   
Sbjct: 254 SMQDEKSQIKNKEKAMKILLARIYELEEEKRNK--EIADNRKSQVGTGDRSERIRTYNF- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           P   + D R N       D L+G++ + + + +A
Sbjct: 311 PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIA 344


>gi|257462414|ref|ZP_05626828.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|317060078|ref|ZP_07924563.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|313685754|gb|EFS22589.1| peptide chain release factor 1 [Fusobacterium sp. D12]
          Length = 359

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/246 (45%), Positives = 152/246 (61%), Gaps = 9/246 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLL 171
           D N+  +E+  GAGG E+  +A  L RMY R+AE++K+K E +E  D E   G+K     
Sbjct: 106 DDNNVIVEIRGGAGGDEAAIFAGDLFRMYCRYAERKKWKVEIIEKQDLEGLDGLKEVAFS 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V+D  E++I   D +ID
Sbjct: 166 IQGFGAYSKLKFESGVHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVQIDPKDLKID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+ GAGGQHVN TDSAVRITH+PTGV+VQCQ ERSQ KN+ +A   L +KL E+E++K
Sbjct: 226 TYRSGGAGGQHVNMTDSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEIEK 285

Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            R EI   GE  + ++G G    +IR+Y   P   + D R  +        LDGDLD+ +
Sbjct: 286 QRSEIE--GE-RRLQVGTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMI 341

Query: 348 KATLAI 353
            A +  
Sbjct: 342 DALITF 347


>gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC
           824]
 gi|20139340|sp|Q97F68|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC
           824]
 gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
          Length = 359

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 195/346 (56%), Gaps = 18/346 (5%)

Query: 20  VQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL F       L+ K  DP +  N  E + L +E   ++N +   +E +    D    
Sbjct: 2   LERLEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEAD 61

Query: 73  LELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGT 128
            E+  ++ D  + +   + ++ + K  V+Y++   ++    D ND+   ++E+  G GG 
Sbjct: 62  KEMLRDKIDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTGGE 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE++ + TE +  ++ +  G K    ++KG  AY  +K E G H
Sbjct: 122 EAALFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESGTH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P VDD ++IEI+ +D RID +RASG GGQ VNTTDS
Sbjct: 182 RVQRVPNTESSGRIHTSAATVAVLPEVDD-VDIEINPNDIRIDVFRASGHGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+ Q KNK +A  +LRA+LYE    +R   A I E+ + ++G 
Sbjct: 241 AVRITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERN--AGIAENRRNQVGS 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   + D R  +        LDGD+D+ +   +
Sbjct: 299 GDRSERIRTYNF-PQGRITDHRIGLTIYKLEQFLDGDIDEVINGLI 343


>gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 361

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 110/244 (45%), Positives = 155/244 (63%), Gaps = 9/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMYTR+AEK+ +K E L +++    GIK     I
Sbjct: 110 DEKNVILEIRAGTGGEEAALFAQDLFRMYTRYAEKKGWKVEILSLNETGLGGIKEVIATI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   +S  R HTS +++ + P  ++ ++I I E D +IDT
Sbjct: 170 SGKGAYSRLKYESGVHRVQRIPVTESGGRIHTSAATVAILPEAEE-VDIHIDEKDLKIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV C  ERSQ +N+ +A  +LRA+L EL E Q+
Sbjct: 229 YRSSGAGGQHVNTTDSAVRITHIPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQ 288

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +E++ +   + +++IG G    +IR+Y   P   V D R  +   +  + LDG+LD+ + 
Sbjct: 289 KEQLDS---ARRSQIGSGDRSEKIRTYNF-PENRVTDHRIKLTLYNLEEFLDGELDEMID 344

Query: 349 ATLA 352
           A  A
Sbjct: 345 ALTA 348


>gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 360

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/286 (41%), Positives = 174/286 (60%), Gaps = 18/286 (6%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           + E+A+EE     ++ET   L  ++LE + ++   LL  +  D  + +LE+ AG GG E+
Sbjct: 76  MREMAVEE-----VRETKQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309
           RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q+    AN I    K  +G G
Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 304 DRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|253583342|ref|ZP_04860540.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
 gi|251833914|gb|EES62477.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
          Length = 358

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 148/246 (60%), Gaps = 6/246 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +  +E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  +    GIK    
Sbjct: 104 ENDDKNVIIEIRGGAGGDEAALFAGNLFRMYSRYAERKKWKIEIIEKQEMGIGGIKEVVF 163

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V+D  E++I   D +I
Sbjct: 164 SINGFGAYSRLKFESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYR+ GAGGQHVN TDSAVRITH+PTG++VQCQ ERSQ KN+ +A   L +KL+E+E +
Sbjct: 224 DTYRSGGAGGQHVNMTDSAVRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECE 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           K+   + +    + ++G G    +IR+Y   P   + D R           LDGDLD+ +
Sbjct: 284 KQR--SQVESERRLQVGTGDRSEKIRTYNF-PQGRITDHRIKFTVYQLEAFLDGDLDEMI 340

Query: 348 KATLAI 353
            A +  
Sbjct: 341 DALITF 346


>gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 360

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + ++ 
Sbjct: 55  LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101

Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  
Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI
Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK
Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279

Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L +   Q+    AN I    K  +G G    +IR+Y   P   V D R N+   S  +VL
Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335

Query: 340 DGDLDDFMKATLA 352
            G +D  ++  LA
Sbjct: 336 AGGVDAVIEPLLA 348


>gi|291541665|emb|CBL14775.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           bromii L2-63]
          Length = 357

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 201/348 (57%), Gaps = 29/348 (8%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R S L+ +   P +  N  E + +M+E + ++  +   ++ ++ +           E+D
Sbjct: 10  KRYSELSERLYQPSVAGNPEEYQKIMKEIKSIEEIVLTYRKYKEAV---------QTEKD 60

Query: 81  DCSILQETSDN----LQRIKLEVEYKQFESL------LSGEADSND---AYLEVHAGAGG 127
              IL+ETSD     L +I+L+      ++L      L    D ND     +E+  GAGG
Sbjct: 61  SLEILEETSDKELKELAQIELDEAKDNIKNLAEDLKILLLPKDPNDERNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  ++ +L RMY+ +AEK+ FK E +  ++ E  G K  + +I+G  AY   K E GV
Sbjct: 121 EESALFSAVLFRMYSMYAEKKGFKIEIINANETEIGGYKEISFMIEGEGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  +D +E+EI  +D +IDT+R+SGAGGQH+N T 
Sbjct: 181 HRVQRVPETESQGRVHTSTTTVAVLPEAED-VELEIDPNDLKIDTFRSSGAGGQHINKTS 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+PTG+VV+CQ ERSQ+KNK +A  +L+++L  L+ ++ ++ + I E+ K ++G
Sbjct: 240 SAIRITHLPTGMVVECQDERSQYKNKDKALKVLKSRL--LKEKQDKQASEIAENRKMQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R  +      ++L+G LD+ + A +A
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLEEILNGSLDEVIDALVA 344


>gi|157964580|ref|YP_001499404.1| peptide chain release factor 1 [Rickettsia massiliae MTU5]
 gi|166977368|sp|A8F1S1|RF1_RICM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157844356|gb|ABV84857.1| Peptide chain release factor RF-1 [Rickettsia massiliae MTU5]
          Length = 361

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
           F+    E   L   V + K   + +  L+ A +F  E+     DN  L    + ED+   
Sbjct: 30  FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIHT 83

Query: 85  LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG E+  +A +L  MY R
Sbjct: 84  LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+ R+   +S  R H
Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  
Sbjct: 197 TSAATVAVLPEAEE-VDIQIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G G    +IR+Y   P 
Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             V D R N+      +V+ +G LD+F++A +A
Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298485681|ref|ZP_07003760.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|119361578|sp|Q48MV4|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 360

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/286 (41%), Positives = 174/286 (60%), Gaps = 18/286 (6%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           + E+A+EE     ++ET   L  ++LE + ++   LL  +  D  + +LE+ AG GG E+
Sbjct: 76  MREMAVEE-----VRETKQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309
           RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q+    AN I    K  +G G
Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 304 DRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4]
 gi|166223603|sp|A3QH30|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           loihica PV-4]
          Length = 361

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/281 (39%), Positives = 171/281 (60%), Gaps = 16/281 (5%)

Query: 77  LEEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
           L EDD  + +   + ++  K  L+V   + + LL      D N+A+LE+ AGAGG E+  
Sbjct: 69  LAEDDADLKEMAQEEIKEAKATLDVLEGELQILLLPKDPKDDNNAFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+ E  +++ E +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYCEANRWQMEIMNANEGEHGGFKEIIVKVSGDGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVVVMPEIPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEI---- 306
           THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR  EE     ES++  +    
Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSEE-----ESTRRNLVASG 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               ++R+Y   P   V + R N+     S+V++GDLD  +
Sbjct: 304 DRSERVRTYNF-PQGRVSEHRINLTLYRLSEVMEGDLDAIL 343


>gi|154482489|ref|ZP_02024937.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
 gi|149736690|gb|EDM52576.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
          Length = 356

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/348 (35%), Positives = 199/348 (57%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  D  ++R   +  +  DP++  +    + LM+E+  L     A    KE +  + D
Sbjct: 1   MFDKLDGILERYDEIMEQLNDPNVVSDQNNFRKLMKEQSDLAPIVEAYKAYKEAKQTVED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L++L+   +E+   +  +E ++  ++I    E  +   L   E D  +  +E+  GAGG
Sbjct: 61  SLMILDEESDEEMRELAKEEMNEAKEQITELEEKLKILLLPKDENDDKNVVVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +AE + +KTE + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYCMYAETQHWKTEMISVNENGLGGFKEVVFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS +++ + P  ++ +++EI  +DCR D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPVTESGGRIHTSTATVAIMPEAEE-VDVEIDMNDCRFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LRA+LYELE QK+++  +  E+ +++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRARLYELECQKKQDAES--EARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R         ++L+G L++ +   +A
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKFTSHRLDEILNGHLEEIIDNCIA 344


>gi|238899147|ref|YP_002924829.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259585226|sp|C4K7Y8|RF1_HAMD5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229466907|gb|ACQ68681.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 360

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 182/333 (54%), Gaps = 13/333 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L     DP   Q+    +M+ RE   L N      E   +L +++I  +  L+  D  + 
Sbjct: 19  LQAHLADPLTIQDQERFRMMSREYAQLSNIAELFTEWL-KLQNDMIAAKSLLQ--DPEMH 75

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA----DSNDAYLEVHAGAGGTESQDWANMLLRMY 141
           +  ++ L++ K++ E    +  +        DS   +LE+ AG GG E+  +A  L RMY
Sbjct: 76  EMATEELEKAKIQSEQLTQQLQILLLPKDIDDSRSCFLEIRAGTGGDEAAIFAGDLFRMY 135

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+AE R +K E +  H+GE  G K     I G   YG LK E G HR+ R+   +S  R
Sbjct: 136 ARYAESRSWKMEIISAHEGEHGGYKEMITKISGEGVYGQLKFESGGHRVQRVPTTESQGR 195

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS  ++ V P + +    +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV
Sbjct: 196 IHTSACTVAVMPEIPEEELPKITLSDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVV 255

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQ 318
           +CQ ERSQHKNKA+A ++L A+++  ++QKR++        +  +G G +    R+Y   
Sbjct: 256 ECQDERSQHKNKAKAMSVLGARMHAAQVQKRQQAQ--ASERRNLLGSGDRSDRHRTYNF- 312

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           P   V D R N+      +V+ G LD  +   L
Sbjct: 313 PQGRVTDHRINLTLYRLDEVMSGKLDILIHPLL 345


>gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|75503325|sp|Q4ZXW7|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63254909|gb|AAY36005.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 360

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + ++ 
Sbjct: 55  LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101

Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  
Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI
Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK
Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279

Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L +   Q+    AN I    K  +G G    +IR+Y   P   V D R N+   S  +VL
Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335

Query: 340 DGDLDDFMKATLA 352
            G +D  ++  LA
Sbjct: 336 AGGVDAVIEPLLA 348


>gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822]
 gi|46576758|sp|Q7WCE3|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis]
          Length = 360

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 183/339 (53%), Gaps = 11/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL  ++    +P    ++   + L RER  L+  +           D     E+ L +
Sbjct: 13  AHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM-LSD 71

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136
            D   + E      R ++E E +    LL    D +D    +LE+ AG GG ES  ++  
Sbjct: 72  PDMKAMAEDEIKTGRARIE-EMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFSGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMYTR+AE R ++ E +   + E  G K   + I G  AYG LK E G HR+ R+   
Sbjct: 131 LLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFESGAHRVQRVPAT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  D   +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH+P
Sbjct: 191 EAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITHVP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ +RSQH+NK +A  +L A+L + E+++R+  +      K+ IG G    +IR
Sbjct: 251 TGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+       +++GDLD+   A LA
Sbjct: 309 TYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLA 346


>gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189039973|sp|B0TX37|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 361

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 180/314 (57%), Gaps = 11/314 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY--K 102
           L +E  HL+  +   KE    L D     E+ L E D  +++   + L+     +E    
Sbjct: 38  LSKEYSHLEPIVMAFKEYTQALEDKEAAYEM-LNEKDAELVEMAKEELKSANESIERLED 96

Query: 103 QFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           + + LL     ++DA  +LE+ AG GG E+  ++  L +MY+++AE+R +K E +   +G
Sbjct: 97  ELQILLLPRDPNDDANIFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEG 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G K     I G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   
Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML
Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           ++KL + E+ K+++     ++ K  +G G    +IR+Y   P   V D R N+      +
Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKNLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333

Query: 338 VLDGDLDDFMKATL 351
           V++G LD  ++  +
Sbjct: 334 VMEGSLDSIIQPLI 347


>gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|119361581|sp|Q3IK95|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 361

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 185/331 (55%), Gaps = 11/331 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R   +     DP + ++    + L +E   L+  +      Q    D +I  E  L++
Sbjct: 13  VERYEEVQALLSDPSVIRDQNRFRALSKEYSDLEEVVKTFLSYQQAQQD-VISAEEMLKD 71

Query: 80  DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D  I +   +  +  K ++    +  Q   L     D+N+ YLEV AG GG E+  +A 
Sbjct: 72  SDPDIREMAQEEYKEAKAQILTIEDEIQVLMLPKDPKDNNNVYLEVRAGTGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE +K+K + +  ++GE  G K     I G   +G LK E GVHR+ R+  
Sbjct: 132 DLFRMYSRYAETKKWKVDVVTTNEGEHGGYKEIIANISGEGVFGQLKFESGVHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V   V ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+RITHI
Sbjct: 192 TESQGRVHTSACTVAVMAEVPEAEAIEINSADLKVDTFRASGAGGQHVNKTDSAIRITHI 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR+  A      +  +G G    +I
Sbjct: 252 PTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRD--AAEASERRNLVGSGDRSERI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           R+Y   P   + D R N+     ++V+ GDL
Sbjct: 310 RTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339


>gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118]
 gi|119361589|sp|Q21YY9|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax
           ferrireducens T118]
          Length = 366

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 178/310 (57%), Gaps = 18/310 (5%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESL 107
           Q L+  +S  +E+     D+  +  +A EE D   + LQ+  + LQR+ L  +       
Sbjct: 56  QQLEADLSGAQELLRGSVDDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPD----- 110

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
                D+ +A++E+ AG GG ES  +A  LLRMYTR+ E+R +K E +     E  G K 
Sbjct: 111 -----DARNAFVEIRAGTGGDESALFAADLLRMYTRYCERRGWKAEIISESPSELGGYKE 165

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             + I+G + YG LK E G HR+ R+   ++  R HTS  ++ V    D+++ I+I+ +D
Sbjct: 166 VVIKIEGDHVYGALKFESGGHRVQRVPVTETQGRIHTSACTVAVLAEPDEAVAIQINPAD 225

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RIDTYRASGAGGQH+N TDSAVRITH+PTG+V +CQ  RSQH NKAQA  +L A+++E 
Sbjct: 226 LRIDTYRASGAGGQHINKTDSAVRITHLPTGIVAECQDGRSQHSNKAQALKVLTARIHEK 285

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +  + E  A      K  IG G    +IR+Y   P   + D R N+       +++GDLD
Sbjct: 286 D--RSERAAKDAAERKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDLD 342

Query: 345 DFMKATLAIK 354
           D ++A  A +
Sbjct: 343 DVVQALQAFE 352


>gi|67459154|ref|YP_246778.1| peptide chain release factor 1 [Rickettsia felis URRWXCal2]
 gi|75536414|sp|Q4ULG0|RF1_RICFE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67004687|gb|AAY61613.1| Peptide chain release factor RF-1 [Rickettsia felis URRWXCal2]
          Length = 355

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 201/349 (57%), Gaps = 29/349 (8%)

Query: 16  WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           ++N  ++LS       F+    E   L   V + K   + +  L+ A +F  E+     D
Sbjct: 14  YENLGKKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LD 70

Query: 69  NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           N  L    + ED+   L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG
Sbjct: 71  NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G
Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
 gi|189039992|sp|A8H7A5|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
          Length = 361

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/308 (37%), Positives = 178/308 (57%), Gaps = 9/308 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----L 97
           + L +E   L++ +S  K  Q +  ++L   +  +EEDD  + +   +  +  K     L
Sbjct: 36  RALSKEYSQLEDVVSTFKSFQ-QAEEDLESAKEMMEEDDPELKEMAQEEYKVAKSAIAAL 94

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           E E  Q   L     D N+ ++E+ AGAGG E+  +A  L RMY+R+AE ++++ E +  
Sbjct: 95  EDEL-QILLLPKDPNDDNNCFIEIRAGAGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNT 153

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
           ++GE  G K     I G   YG LK E G HR+ R+   +S  R HTS  ++ V P V +
Sbjct: 154 NEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQRVPETESQGRVHTSACTVIVLPEVPE 213

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           +  IEI+++D ++DT+RASGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA 
Sbjct: 214 AEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAM 273

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           ++L A++  +E +KR         +    G    +IR+Y   P   V + R N+      
Sbjct: 274 SVLAARIQAVEDEKRRSAEESTRRNLVSSGDRSERIRTYNF-PQGRVSEHRINLTLYRLG 332

Query: 337 DVLDGDLD 344
           + ++GD+D
Sbjct: 333 EFMEGDID 340


>gi|229586782|ref|YP_002845283.1| peptide chain release factor 1 [Rickettsia africae ESF-5]
 gi|259585242|sp|C3PNN0|RF1_RICAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|228021832|gb|ACP53540.1| Peptide chain release factor RF-1 [Rickettsia africae ESF-5]
          Length = 355

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
           F+    E   L   V + K   + +  L+ A +F  E+     DN  L    + ED+   
Sbjct: 30  FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83

Query: 85  LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG E+  +A +L  MY R
Sbjct: 84  LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+ R+   +S  R H
Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  
Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G G    +IR+Y   P 
Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGNRSERIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             V D R N+      +V+ +G LD+F++A +A
Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|289550267|ref|YP_003471171.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315660273|ref|ZP_07913128.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
 gi|289179799|gb|ADC87044.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315494700|gb|EFU83040.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
          Length = 358

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 192/345 (55%), Gaps = 13/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCD 68
           +FD  D   +R   LN    DP +  N  + +   +E+  L   +   +E +++   L D
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNNADKLRKYSKEQAELQKTVDVYREYKNKKEELSD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +L    ++++  +L+E S NL+  + L  E  +F  +     D  D  +E+ A AGG
Sbjct: 61  IEDMLSETDDKEEIEMLKEESSNLKDALPLLEEKLKFLLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMYT++AE   F+TE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYTKYAEANGFRTEVVEATESDHGGYKEVSFQVSGAGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGVIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    ++R+Y   P   V D R  +       +++G LD+ + A
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340


>gi|83592089|ref|YP_425841.1| peptide chain release factor 1 [Rhodospirillum rubrum ATCC 11170]
 gi|119361593|sp|Q2RWE1|RF1_RHORT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83575003|gb|ABC21554.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 354

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 159/268 (59%), Gaps = 14/268 (5%)

Query: 95  IKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           ++LE E    E       L   EAD     LEV AG GG E+  +A  LLRMY R+A++R
Sbjct: 79  LRLEAEIPALEHGVKLLLLPRDEADDRGVILEVRAGTGGDEAALFAGDLLRMYERYAQER 138

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            ++ E +E  D +  GIK A+  I G   +  LK E GVHR+ R+   +   R HTS ++
Sbjct: 139 GWRFEVMEASDTDIGGIKEASAAISGRGVFARLKFESGVHRVQRVPVTEGGGRIHTSAAT 198

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P  ++ +++EI E D RIDTYR+ GAGGQHVNTTDSAVRITH+P+GVV QCQ E+S
Sbjct: 199 VAVLPEAEE-VDVEIEEKDLRIDTYRSQGAGGQHVNTTDSAVRITHLPSGVVAQCQDEKS 257

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325
           QHKNKA+A  MLR KLY+   Q  ++     E+ + ++G G    +IR+Y   P   V D
Sbjct: 258 QHKNKAKAMRMLRTKLYDHARQTADDAR--AEARRVQVGSGDRSERIRTYNF-PQGRVTD 314

Query: 326 LRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            R  +      +VL G  LD+ ++  +A
Sbjct: 315 HRIGLTLHRLPEVLAGTALDEVIEPLIA 342


>gi|34580401|ref|ZP_00141881.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
 gi|28261786|gb|EAA25290.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
          Length = 355

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
           F+    E   L   V + K   + +  L+ A +F  E+     DN  L    + ED+   
Sbjct: 30  FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83

Query: 85  LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG E+  +A +L  MY R
Sbjct: 84  LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+ R+   +S  R H
Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  
Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G G    +IR+Y   P 
Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             V D R N+      +V+ +G LD+F++A +A
Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 360

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/286 (41%), Positives = 174/286 (60%), Gaps = 18/286 (6%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           + E+A+EE     ++ET   L  ++LE + ++   LL  +  D  + +LE+ AG GG E+
Sbjct: 76  MREMAVEE-----VRETKQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309
           RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q+    AN I    K  +G G
Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 304 DRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|218196470|gb|EEC78897.1| hypothetical protein OsI_19275 [Oryza sativa Indica Group]
 gi|222630945|gb|EEE63077.1| hypothetical protein OsJ_17885 [Oryza sativa Japonica Group]
          Length = 368

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%)

Query: 98  EVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           ++++K F SLL   EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K +A++
Sbjct: 101 QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 160

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I +    G K A+  I GP AYG LK E G+HR+ R+   + + R HTS  S+ + P  D
Sbjct: 161 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 220

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +++++   D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV  Q ERSQH+NKA+A
Sbjct: 221 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 279

Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
             +LRA+LYE+E  +    R ++ +  IG   ++E     +IR+Y   P   V D R  I
Sbjct: 280 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 333

Query: 331 EKTSPSDVLDGD-LDDFMKATL 351
              S  DV++G+ LD F+ A L
Sbjct: 334 THHSIEDVMEGESLDIFIDALL 355


>gi|327399685|ref|YP_004340554.1| peptide chain release factor 1 [Hippea maritima DSM 10411]
 gi|327182314|gb|AEA34495.1| Peptide chain release factor 1 [Hippea maritima DSM 10411]
          Length = 354

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 150/245 (61%), Gaps = 7/245 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  D  LE+ AG GG E+  +A  L RMY+R+AE + FK E L     +  GIK    
Sbjct: 102 EADDRDVILEIRAGTGGEEAALFAADLFRMYSRYAENKGFKVEVLSKSLSDTGGIKEIIA 161

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG  AY   K E G HR+ RI   +S  R HTS +++ V P  ++ +++EI   D RI
Sbjct: 162 EIKGKGAYHLFKHESGTHRVQRIPITESQGRIHTSAATVAVLPEAEN-VDVEIKPEDLRI 220

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +RASG GGQHVNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A  +L+++LY+   +
Sbjct: 221 DVFRASGHGGQHVNTTDSAVRITHLPTGMVVSCQDEKSQLKNKEKALKILKSRLYDFYRR 280

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           K++E     +  K++IG G    +IR+Y   P   V D R N+       +++GDLD+ +
Sbjct: 281 KKDE--ERAKERKSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDSIMEGDLDELI 337

Query: 348 KATLA 352
           +A + 
Sbjct: 338 EALIV 342


>gi|86148712|ref|ZP_01066989.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218708755|ref|YP_002416376.1| peptide chain release factor 1 [Vibrio splendidus LGP32]
 gi|254790907|sp|B7VKH3|RF1_VIBSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85833505|gb|EAQ51686.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218321774|emb|CAV17730.1| Peptide chain release factor 1 [Vibrio splendidus LGP32]
          Length = 362

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 188/346 (54%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  N  + + L +E   L+      K  Q +  ++L  
Sbjct: 6   LIKLETLVERYEEVQHLLGDPDVLGNQDKFRALSKEYSQLEEVTGCFKSYQ-QAQEDLEA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E    EDD  + +   + ++  K  +E    E  +L    D ND    +LE+ AGAGG 
Sbjct: 65  AEEMANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AEK+ ++ E +  +  E+ G K     I G   YG +K E G H
Sbjct: 125 EAGIFAGNLFRMYSKFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI   D +IDT+RASGAGGQHVNTTDS
Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     ++VL+GD+   +   L
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVL 347


>gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
 gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
          Length = 363

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  ++  L RMYTR+AEKR +K E +  ++GE  G K     I
Sbjct: 109 DGKNVILEIRAGTGGDEAAIFSGDLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P +++  +++I+++D RIDT
Sbjct: 169 AGDGVYGQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A ++L  +L +  +QK 
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A      K+ +G G    +IR+Y   P   V D R N+      +++ GD+D  ++ 
Sbjct: 289 Q--AEQAAERKSLVGSGDRSERIRTYNY-PQGRVSDHRINLTVYKLDELMQGDVDMIIQP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|238797830|ref|ZP_04641323.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
 gi|238718358|gb|EEQ10181.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
          Length = 360

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 149/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGEGAFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|224035189|gb|ACN36670.1| unknown [Zea mays]
          Length = 301

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/261 (43%), Positives = 163/261 (62%), Gaps = 15/261 (5%)

Query: 99  VEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++++ F SLL   EAD  D  LEV AG GG E+  +A  + RMY ++A+K  +K + ++I
Sbjct: 35  LQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 94

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +    G K A+  I GP A+G LK E G+HR+ R+   + + R HTS  S+ V P  D+
Sbjct: 95  MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADE 154

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV  Q ERSQH NKA+A 
Sbjct: 155 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 213

Query: 278 NMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
            +LRA+LYELE ++    R ++ +  IG   ++E     +IR+Y   P   V D R  + 
Sbjct: 214 KVLRARLYELERRRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGVT 267

Query: 332 KTSPSDVLDGD-LDDFMKATL 351
             S +DV++G+ LD F+ A L
Sbjct: 268 HHSIADVMEGESLDMFVDALL 288


>gi|209694372|ref|YP_002262300.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
 gi|238058709|sp|B6EHH5|RF1_ALISL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208008323|emb|CAQ78475.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
          Length = 362

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 183/319 (57%), Gaps = 11/319 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L RE   L+      +  + ++ ++L+  +   +EDD  + +   D 
Sbjct: 25  DPGVIGDQNKFRALSREYSQLEEVTQCFQAYE-KVQEDLVAAQEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K   E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKEAKEASERLTDELQVLLIPKDPNDERNCFLEIRAGAGGDEAGIFAGNLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +  H  E+ G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 KGWRIEVMSSHASEQGGFKEMIAKVSGDGAYGILKFESGGHRVQRVPETESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           +I V   + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TIAVMAEIPEADLPEIKSSDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++ + E  +R   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARIIQAEEARR--AAVVSDTRRNLLGSGDRSDRIRTYNY-PQSRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDL 343
           D R N+     ++V++GDL
Sbjct: 321 DHRINLTIYRLNEVMEGDL 339


>gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 360

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + ++ 
Sbjct: 55  LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETRQQL--VELEAQLQRM 101

Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  
Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI
Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK
Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279

Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L +   Q+    AN I    K  +G G    +IR+Y   P   V D R N+   S  +VL
Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335

Query: 340 DGDLDDFMKATLA 352
            G +D  ++  LA
Sbjct: 336 AGGVDAVIEPLLA 348


>gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
 gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
          Length = 354

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/350 (34%), Positives = 192/350 (54%), Gaps = 30/350 (8%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLIL 72
           + RL  L      P +  +    ++L +E  HL       ++ IS  KE+ D        
Sbjct: 9   LNRLPELEELLGQPDVVNDQKRYRLLTQEHAHLSQLKQVYEDLISSRKELSDNE------ 62

Query: 73  LELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGT 128
            E+   E+D   ++   ++++R+  K     K+ E+L+      D+ +  LE+ AG GG 
Sbjct: 63  -EMFASEEDAEFIKVLEEDIERLTKKTGELQKKLETLIVPPDPKDNKNTILELRAGTGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +    +RMY  +A++R +K E L     +  G K   + + GPN Y +LK E G H
Sbjct: 122 EAALFVGDCVRMYKMFADERGWKYEELASSPSDAGGFKEYMMALSGPNVYRYLKYEGGTH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V    D+  E++I E D R+DTYRASGAGGQHVNTTDS
Sbjct: 182 RVQRVPETETQGRVHTSAITVAVLLEPDEDSEVQIDEKDLRVDTYRASGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESS 302
           AVR+THIPTG+V  C +ERSQHKN+ +A  +L+AK+ E+E QK+      E  + +G   
Sbjct: 242 AVRLTHIPTGIVAYCSEERSQHKNRDKAMRLLKAKIMEIEAQKKFEERASERASQVGSGD 301

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           ++E     +IR+Y   P   + D R N+ K +   V++GDL++ + A +A
Sbjct: 302 RSE-----RIRTYNF-PQNRITDHRINLTKYNLDKVMEGDLEEIVNAIVA 345


>gi|268592708|ref|ZP_06126929.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
 gi|291311851|gb|EFE52304.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
          Length = 360

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 151/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +   DGE  G K     I
Sbjct: 107 DEYNCFVEIRAGAGGDEAAIFAGDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E G HR+ R+   +S  R HTS  ++ + P + ++   EIS +D RIDT
Sbjct: 167 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTVAILPELPEAELPEISPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A      +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 Q--AAEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|195650889|gb|ACG44912.1| peptide chain release factor 1 [Zea mays]
          Length = 356

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/258 (44%), Positives = 160/258 (62%), Gaps = 9/258 (3%)

Query: 99  VEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++++ F SLL   EAD  D  LEV AG GG E+  +A  + RMY ++A+K  +K + ++I
Sbjct: 90  LQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 149

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +    G K A+  I GP A+G LK E G+HR+ R+   + + R HTS  S+ V P  D+
Sbjct: 150 MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADE 209

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV  Q ERSQH NKA+A 
Sbjct: 210 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 268

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334
            +LRA+LYELE  +R    +  +    +IG G    +IR+Y   P   V D R  +   S
Sbjct: 269 KVLRARLYELE--RRRLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGVTHHS 325

Query: 335 PSDVLDGD-LDDFMKATL 351
            +DV++G+ LD F+ A L
Sbjct: 326 IADVMEGESLDMFVDALL 343


>gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
 gi|189039993|sp|A8FYZ0|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
          Length = 361

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 200/350 (57%), Gaps = 19/350 (5%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L GL + +  V  L+ L+    DP +  +    + L +E   L++ ++  K  Q    D 
Sbjct: 9   LEGLLERNEEV--LALLS----DPGVISDQERFRALSKEYSQLEDVVTSFKSFQQATEDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGA 125
               E+A  +DD  + +   + ++  K  LE    + + LL      D N+ ++E+ AGA
Sbjct: 63  EAAKEMA-SDDDPELKEMAQEEMKEAKSLLEKLEDELQILLLPKDPNDDNNCFIEIRAGA 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+++ E ++++ E +  ++GE  G K     + G   YG LK E 
Sbjct: 122 GGDEAAIFAGDLFRMYSKYVESKRWQLEVMNTNEGEHGGFKEVIAKVSGEGVYGQLKFES 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS  ++ V P + +S  IEI++ D ++DT+RASGAGGQHVN 
Sbjct: 182 GGHRVQRVPETESQGRVHTSACTVVVLPEIPESEAIEINKGDLKVDTFRASGAGGQHVNK 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSA+R+THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR    +  ES++  
Sbjct: 242 TDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRR---SAEESTRRN 298

Query: 306 -IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +G G    +IR+Y   P   V + R N+     ++V++G+LD  ++  +
Sbjct: 299 LVGSGDRSERIRTYNF-PQGRVSEHRINLTLYRLNEVMEGELDAILEPLM 347


>gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|61214584|sp|Q5WUB1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214585|sp|Q5X2V3|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214588|sp|Q5ZT29|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b]
          Length = 362

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 10/283 (3%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123
           +NL  L   LE DD  +     + +  +K ++E      Q+  +     D  + YLEV A
Sbjct: 60  NNLDSLNELLESDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK 
Sbjct: 120 GTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKF 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHV
Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++     ++ K
Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQ--EQAQTRK 297

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           + +G G    +IR+Y   P   + D R N+     SD+++G+L
Sbjct: 298 SLVGTGDRSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNL 339


>gi|53804790|ref|YP_113526.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
 gi|61214591|sp|Q60A21|RF1_METCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53758551|gb|AAU92842.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
          Length = 360

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 152/242 (62%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY+R+AE++ ++ E +   +GE  G K   + I
Sbjct: 109 DERNVFLEVRAGTGGAEAAIFAGDLQRMYSRYAERQGWRAEIVSESEGEHGGYKEVVMRI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   ++  R HTS  ++ + P  DD +EI+I+ +D RIDT
Sbjct: 169 SGQNVYSRLKFEAGTHRVQRVPTTEAQGRIHTSACTVAILPEFDD-VEIDINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITHIPTG VV+CQ ERSQHKN+A+A ++L+A++  L   + 
Sbjct: 228 FRASGAGGQHVNRTDSAIRITHIPTGTVVECQDERSQHKNRARAMSLLQARI--LAAAQE 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++ + I  S K ++G G    +IR+Y   P   + D R N+       +++GDLD  +  
Sbjct: 286 KQNSEIAASRKLQVGSGDRSERIRTYNF-PQGRLTDHRINLTIYRLDAIMEGDLDPVIDP 344

Query: 350 TL 351
            L
Sbjct: 345 LL 346


>gi|307131078|ref|YP_003883094.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
 gi|306528607|gb|ADM98537.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
          Length = 361

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LE+ AG GG E+  +A  L RMY+R+AE R++K E +   DGE  G K     +
Sbjct: 107 DERGCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   +I+ +D RIDT
Sbjct: 167 AGDGAYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G    +IR+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338


>gi|255020676|ref|ZP_05292738.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
 gi|254969912|gb|EET27412.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
          Length = 365

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/275 (43%), Positives = 159/275 (57%), Gaps = 12/275 (4%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           AL E+D    +E    L RI+   E  Q   L     D  + +LE+ AG GG E+  +A 
Sbjct: 81  ALAEEDQ---REAEAELARIE---ESLQVRLLPRDPNDERNVFLEIRAGTGGEEAALFAA 134

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMYTR+AE R F    L   + E  G K   L I G  AY  LK E G HR+ R+  
Sbjct: 135 DLARMYTRYAEGRGFGVTVLSSTESERGGYKEIVLEISGRGAYSRLKFESGGHRVQRVPE 194

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P VD   EI I  SD RIDTYRASGAGGQHVN TDSA+RITH+
Sbjct: 195 TESQGRIHTSACTVAVLPEVDAVHEIHIQPSDLRIDTYRASGAGGQHVNKTDSAIRITHL 254

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV CQ++RSQHKN+A+A  +L+A+L  LE+ + ++ ++   + ++ IG G    +I
Sbjct: 255 PTGLVVACQEDRSQHKNRARAMALLQARL--LEMVREQQESSTAATRRSLIGSGDRSERI 312

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           R+Y   P   + D R N+       VL G+LD  +
Sbjct: 313 RTYNF-PQGRITDHRINLTIYRLEAVLAGELDALI 346


>gi|238650227|ref|YP_002916078.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
 gi|259585243|sp|C4K0C9|RF1_RICPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238624325|gb|ACR47031.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
          Length = 355

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
           F+    E   L   V + K   + +  L+ A +F  E+     DN  L    + ED+   
Sbjct: 30  FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83

Query: 85  LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG E+  +A +L  MY R
Sbjct: 84  LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+ R+   +S  R H
Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  
Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G G    +IR+Y   P 
Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             V D R N+      +V+ +G LD+F++A +A
Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|215764957|dbj|BAG86654.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 314

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%)

Query: 98  EVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           ++++K F SLL   EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K +A++
Sbjct: 47  QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 106

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I +    G K A+  I GP AYG LK E G+HR+ R+   + + R HTS  S+ + P  D
Sbjct: 107 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 166

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +++++   D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV  Q ERSQH+NKA+A
Sbjct: 167 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 225

Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
             +LRA+LYE+E  +    R ++ +  IG   ++E     +IR+Y   P   V D R  I
Sbjct: 226 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 279

Query: 331 EKTSPSDVLDGD-LDDFMKATL 351
              S  DV++G+ LD F+ A L
Sbjct: 280 THHSIEDVMEGESLDIFIDALL 301


>gi|220915515|ref|YP_002490819.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|254790857|sp|B8JAU2|RF1_ANAD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219953369|gb|ACL63753.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 370

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 195/336 (58%), Gaps = 12/336 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR   L     DP +  N    + + +ER  ++  ++ ++  + +L +++   E  L + 
Sbjct: 15  QRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYR-KLLEDVEGNEALLADK 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +   + L +++ +V+  + +  L        D  D  +E+ AGAGG E+  +A  
Sbjct: 74  DPELRELAKEELAQLRPQVDPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGLFAAE 133

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ R+   
Sbjct: 134 VMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQRVPAT 193

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  ++ I+++++ +D  +D +R++G+GGQ VNTTDSAVR+TH P
Sbjct: 194 EAQGRIHTSTVTVAVMPEAEE-IDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQQE+SQ KN+  A  MLRAKL+E+E Q+R+  A    + K+++G G    +IR
Sbjct: 253 TGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIE-QERQRSARDA-TRKSQVGTGDRSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   + D R N  + +   V+DGD+ D + A
Sbjct: 311 TYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDA 345


>gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185]
 gi|166223602|sp|A6WSF0|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185]
          Length = 363

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 182/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ ++  K  Q    D     E+ LEEDD  + +   + ++  K ++E+ 
Sbjct: 36  RALSKEYAQLEDVVAGFKAYQQAQADLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94

Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E    LL  + D + +A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEVIMKVSGEGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 356

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 156/242 (64%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I
Sbjct: 105 DEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   ++  R HTS +++ V P V++ +++EI+ +D RID 
Sbjct: 165 SGKGAYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPNDIRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ G GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ++
Sbjct: 224 FRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   I E  K+++G G    +IR+Y   P   V D R  +      +VLDGDLD+ + A
Sbjct: 284 QK--EIAEVRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDA 340

Query: 350 TL 351
            +
Sbjct: 341 LI 342


>gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
 gi|189039991|sp|B0TR27|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
          Length = 361

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/308 (37%), Positives = 176/308 (57%), Gaps = 9/308 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----L 97
           + L +E   L++ +   K  Q    D     E+ +EEDD  + +   +  +  K     L
Sbjct: 36  RALSKEYSQLEDVVRTFKSYQQAEEDFESAKEM-MEEDDPELKEMAQEEYKATKEAIATL 94

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           E E  Q   L     D N+ ++E+ AGAGG E+  +A  L RMY+R+AE ++++ E +  
Sbjct: 95  EAEL-QILLLPKDPNDDNNCFIEIRAGAGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNT 153

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
           ++GE  G K     I G   YG LK E G HR+ R+   +S  R HTS  ++ V P V +
Sbjct: 154 NEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQRVPETESQGRVHTSACTVIVLPEVPE 213

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           +  IEI+++D ++DT+RASGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA 
Sbjct: 214 AEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAM 273

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           ++L A++  +E +KR         +    G    +IR+Y   P   V + R N+     +
Sbjct: 274 SVLAARIQAVEDEKRRSAEESTRRNLVSSGDRSERIRTYNY-PQGRVSEHRINLTLYRLN 332

Query: 337 DVLDGDLD 344
           + ++GD+D
Sbjct: 333 EFMEGDID 340


>gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
 gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
          Length = 362

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 184/327 (56%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  + + L RE   L+      +  Q +  ++L+  E    EDD  + +   + 
Sbjct: 25  DPDVIGNQDKFRALSREYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GDL   +   +
Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLIDPVI 347


>gi|93006237|ref|YP_580674.1| peptide chain release factor 1 [Psychrobacter cryohalolentis K5]
 gi|119361584|sp|Q1QAW3|RF1_PSYCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|92393915|gb|ABE75190.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           cryohalolentis K5]
          Length = 362

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 176/294 (59%), Gaps = 17/294 (5%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123
            D   +L+ A + D   ++QE  D+ +   +E+E  +  +L+    D ND   A+LE+ A
Sbjct: 63  ADAEAMLKEASDPDMKEMMQEEIDSARDTIVEME--EALNLMMLPKDPNDKVPAFLEIRA 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  ++  L RMY ++A+ + +  E L  ++GE  G K     + G + YG LK 
Sbjct: 121 GTGGDEAAIFSGDLFRMYQKFAQNQGWTLEILSANEGEHGGYKEIITRVSGNSVYGRLKF 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +S  R HTS  ++ V P V+    ++++ +D R DT+R+SGAGGQHV
Sbjct: 181 ESGVHRVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVDLNPADIRFDTFRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN------ 297
           NTTDSAVR+THIPTG VV+CQQERSQHKN+AQA  ML +K+ ++++Q + + A+      
Sbjct: 241 NTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRDL 300

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G   ++E     +IR+Y   P   + D R N+       +++GDLD+ + A L
Sbjct: 301 VGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALL 348


>gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121]
          Length = 358

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 195/346 (56%), Gaps = 15/346 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD    V+ R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L    ++++  +L+E S +L+    E+E +Q + LL      D  D  +E+ A AG
Sbjct: 61  IEEMLNETSDKEEIEMLKEESSSLKNELPEME-EQLKLLLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE   FKTE +E+ + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +     S +++G+LD+ + A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQIMEGNLDEIIDA 340


>gi|33152002|ref|NP_873355.1| peptide chain release factor 1 [Haemophilus ducreyi 35000HP]
 gi|46576749|sp|Q7VMV9|RF1_HAEDU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33148224|gb|AAP95744.1| peptide chain release factor 1 (RF-1) [Haemophilus ducreyi 35000HP]
          Length = 360

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 175/279 (62%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  + +  ++ + + K E+E  +Q   +L    D ND   A+LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKEMATEEITQNKAEIECLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE ++++ E +  ++ E+ G K   + I G + YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYAESKRWRIEEMSANESEQGGYKEIIVKISGESVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E Q+R+ +A   ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVE-QERQAMAQ-ADTRRNLLGTGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|48926665|gb|AAT47454.1| putative peptide chain release factor [Oryza sativa Japonica Group]
          Length = 350

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%)

Query: 98  EVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           ++++K F SLL   EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K +A++
Sbjct: 83  QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 142

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I +    G K A+  I GP AYG LK E G+HR+ R+   + + R HTS  S+ + P  D
Sbjct: 143 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 202

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +++++   D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV  Q ERSQH+NKA+A
Sbjct: 203 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 261

Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
             +LRA+LYE+E  +    R ++ +  IG   ++E     +IR+Y   P   V D R  I
Sbjct: 262 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 315

Query: 331 EKTSPSDVLDGD-LDDFMKATL 351
              S  DV++G+ LD F+ A L
Sbjct: 316 THHSIEDVMEGESLDIFIDALL 337


>gi|302390589|ref|YP_003826410.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
 gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
          Length = 364

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 201/349 (57%), Gaps = 13/349 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD--- 68
           + D  +A++ R   L  +  +P +     E + L +E   L+  +S  +E +  + +   
Sbjct: 1   MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60

Query: 69  -NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
              +L E + + +    ++E  +NLQ+ + E++ +    LL  +  D  D  +E+ AGAG
Sbjct: 61  SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE++ +K E +     E  G K     + G  AY  LK E G
Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   ++  R HTS +++ V P  ++ +++EI+ ++ RID +R+SG GGQ VNTT
Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLPEAEE-VDVEINPNELRIDVFRSSGHGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQ KN+ +A  +LRAKL  LE+++RE+   I +S ++++
Sbjct: 240 DSAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKL--LEMKQREQNEKIAQSRRSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V D R         ++LDG+LD+ ++  +A
Sbjct: 298 GTGDRSERIRTYNF-PQGRVTDHRIGFTTHQLENILDGELDELIERLIA 345


>gi|239832947|ref|ZP_04681276.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
 gi|239825214|gb|EEQ96782.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
          Length = 357

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/319 (38%), Positives = 180/319 (56%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L   +  I+E+ D   + +   +LA   DD +         L+E  +  +RI 
Sbjct: 35  LASEYSELQEVVGKIRELTDARREAV---DLAAMRDDAATDAEMRALALEELPEVEKRIG 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
              +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  TLEQEVQILLLPKDAADEKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E      ES ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--TERSESRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVDALIS 345


>gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 360

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 185/315 (58%), Gaps = 24/315 (7%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L++ +  L+ A + +K+    + D      +A+EE     ++ET   L  + LE + +
Sbjct: 53  KQLIKVQADLEGAQALLKDSDPDMRD------MAVEE-----VRETKQQL--VDLEAQLQ 99

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           +   LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE
Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   I
Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L 
Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277

Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           AKL +   Q+    AN I    K  +G G    +IR+Y   P   V D R N+   S  +
Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDE 333

Query: 338 VLDGDLDDFMKATLA 352
           VL G +D  ++  LA
Sbjct: 334 VLAGGVDAVIEPLLA 348


>gi|115462961|ref|NP_001055080.1| Os05g0277300 [Oryza sativa Japonica Group]
 gi|113578631|dbj|BAF16994.1| Os05g0277300 [Oryza sativa Japonica Group]
          Length = 349

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%)

Query: 98  EVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           ++++K F SLL   EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K +A++
Sbjct: 82  QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 141

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I +    G K A+  I GP AYG LK E G+HR+ R+   + + R HTS  S+ + P  D
Sbjct: 142 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 201

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +++++   D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV  Q ERSQH+NKA+A
Sbjct: 202 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 260

Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
             +LRA+LYE+E  +    R ++ +  IG   ++E     +IR+Y   P   V D R  I
Sbjct: 261 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 314

Query: 331 EKTSPSDVLDGD-LDDFMKATL 351
              S  DV++G+ LD F+ A L
Sbjct: 315 THHSIEDVMEGESLDIFIDALL 336


>gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|238687641|sp|B0K7G6|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 356

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 192/332 (57%), Gaps = 10/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL    D+    
Sbjct: 15  LSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKELLSSNDEELKE 74

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142
               +  Q  + + +  +   +L    D ND     +E+ AGAGG E+  +A+ L RMY+
Sbjct: 75  MAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYS 134

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +AEK+ +K E +  ++ +  G K   L I G  +Y  LK E GVHR+ R+   ++  R 
Sbjct: 135 MYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQRVPTTEAGGRI 194

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS +++ V P V++ +++EI+ +D +ID +R+ G GGQ VNTTDSAVR+THIPTG+VV 
Sbjct: 195 HTSTATVAVLPEVEE-VDVEINPNDIKIDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVT 253

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
           CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I E+ K+++G G    +IR+Y   P
Sbjct: 254 CQDERSQIQNRERALKILRAKLYEMALQEQQR--EIAETRKSQVGTGERSERIRTYNF-P 310

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              V D R  +      +VLDGDLD+ + A +
Sbjct: 311 QGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|283798430|ref|ZP_06347583.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|291073835|gb|EFE11199.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|295090782|emb|CBK76889.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium cf.
           saccharolyticum K10]
 gi|295115024|emb|CBL35871.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SM4/1]
          Length = 358

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/351 (36%), Positives = 208/351 (59%), Gaps = 18/351 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  D+ + R   L  +  +P++ ++  + + LM+E+  L     A    K+    + D
Sbjct: 1   MFDRLDDLLIRYEELMEELNNPYVVEDQKKFRKLMKEQADLAPIVEAYKNYKQAHQDVED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124
           ++ LLE   +E+   +  +E +D  +RI+   E +Q   +L    D ND     +E+ AG
Sbjct: 61  SVALLEEESDEEMRELAKEELADAKKRIE---ELEQELKILLLPKDPNDEKNVMVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A+ L RMY R+AE++++KTE + +++    G K    ++ G  AY  LK E
Sbjct: 118 AGGDEAALFASELYRMYVRYAERKRWKTEIVSLNENGIGGFKEVVFMVTGQGAYSKLKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +++ V P  ++  +IEI  +DCRID  RASG GGQ VN
Sbjct: 178 SGVHRVQRVPETESGGRIHTSTATVAVMPEAEE-FDIEIDMNDCRIDVMRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL++R+  +   E+ ++
Sbjct: 237 TTDSAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELERRQ--SEESEARRS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   V + R  +       V+DG+LD+ + + +A
Sbjct: 295 QIGTGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMDGELDELIDSLIA 344


>gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
 gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
          Length = 362

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 191/346 (55%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +  + + L +E   L+      +  Q +  D+L  
Sbjct: 6   LVKLETLVERYEEVQHLLGDPDVIGDQNKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLEA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E   +EDD  + +   + ++  K  +E    E  +L    D ND    +LE+ AGAGG 
Sbjct: 65  AEDMAQEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AEK+ ++ E +  +D E+ G K     + G   YG +K E G H
Sbjct: 125 EAGIFAGNLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI  +D +IDT+RASGAGGQHVNTTDS
Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G 
Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     ++VL+GD+   +   L
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTLYRLNEVLEGDMQSLIDPVL 347


>gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby]
 gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|166223567|sp|A5IED7|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str.
           Corby]
 gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 362

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 10/283 (3%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123
           +NL  L   LE DD  +     + +  +K ++E      Q+  +     D  + YLEV A
Sbjct: 60  NNLDSLNELLESDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK 
Sbjct: 120 GTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKF 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHV
Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++     ++ K
Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQ--EQAQTRK 297

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           + +G G    +IR+Y   P   + D R N+     SD+++G+L
Sbjct: 298 SLVGTGDRSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNL 339


>gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|189039990|sp|A9L2D4|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678]
          Length = 363

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 182/310 (58%), Gaps = 7/310 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ ++  K  Q    D     E+ LEEDD  + +   + ++  K ++E+ 
Sbjct: 36  RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94

Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E    LL  + D + +A++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +  +
Sbjct: 95  EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K   + + G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR         S    G    ++R+Y   P   V + R N+     ++
Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333

Query: 338 VLDGDLDDFM 347
           V++GDLD  +
Sbjct: 334 VMEGDLDAIL 343


>gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
 gi|238692456|sp|B3PJP4|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
          Length = 360

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/240 (45%), Positives = 147/240 (61%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  ++  L RMY+R+AE + ++ E L   +GE  G K    L+
Sbjct: 109 DEKNCYLEVRAGTGGDEAAIFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+  E+ I+++D RIDT
Sbjct: 169 SGSGVYSKLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSA+RITHIPTG+VV+CQ ERSQHKN+A+A ++L  KL  ++    
Sbjct: 229 YRASGAGGQHVNKTDSAIRITHIPTGIVVECQDERSQHKNRARAMSLLATKLKTMQ---- 284

Query: 293 EEIAN--IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           EE A+  I E  +  +G G    +IR+Y   P   V D R N+   S   V+ GDL+  +
Sbjct: 285 EEAAHKSISEERRNLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYSLDAVMQGDLEPVI 343


>gi|118443694|ref|YP_879014.1| peptide chain release factor 1 [Clostridium novyi NT]
 gi|166223551|sp|A0Q312|RF1_CLONN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118134150|gb|ABK61194.1| peptide chain release factor 1 [Clostridium novyi NT]
          Length = 357

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 194/335 (57%), Gaps = 15/335 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALEEDDC 82
           L+ K  DP +  N  E + L +E   L+  ++  +E +   + L  N  +L    ++D  
Sbjct: 15  LSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEANKEMLSEETDKDMK 74

Query: 83  SILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139
            ++QE    L+   +K + E K    LL  +  D  + ++E+ AGAGG E+  +A  L R
Sbjct: 75  EMIQEEIKTLEESIVKDQEELKIL--LLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFR 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTR+AE+  +KTE +  ++ +  G K    +++G  AY  +K E GVHR+ R+   +S+
Sbjct: 133 MYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESGVHRVQRVPDTESS 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P VDD ++I+I  +D R+D +RASG GGQ VNTTDSAVR+THIPTG+
Sbjct: 193 GRIHTSTATVAVLPEVDD-VDIQIDPNDIRVDVFRASGHGGQCVNTTDSAVRMTHIPTGI 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV CQ E+SQ KNK +A  +L+A+LYE    +R   A+I    K+++G G    +IR+Y 
Sbjct: 252 VVSCQDEKSQLKNKEKAMKVLKARLYEKAEAERS--ASISADRKSQVGTGDRSERIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   V + R  +        LDGD+++ + A +
Sbjct: 310 Y-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALI 343


>gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1]
          Length = 376

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/238 (43%), Positives = 147/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N AYLEV AG GG E+  ++  L RMY+++AE R ++ E L  ++GE  G K     +
Sbjct: 121 DANAAYLEVRAGTGGDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRV 180

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P VD    +EI+ +D RIDT
Sbjct: 181 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 240

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH+PTGVVV+CQ+ERSQHKNKA+A  +L ++L   +   +
Sbjct: 241 YRASGAGGQHINKTDSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQ 300

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 301 ETATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 355


>gi|183598963|ref|ZP_02960456.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
 gi|188021179|gb|EDU59219.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
          Length = 360

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 151/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AGAGG E+  +A  L RMY+R+AE  +++ E +   DGE  G K     I
Sbjct: 107 DEYNCFLEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWRVELMSTSDGEHGGFKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E G HR+ R+   +S  R HTS  ++ + P + ++   EI+ +D RIDT
Sbjct: 167 SGESVYGRLKFESGGHRVQRVPETESQGRIHTSACTVAILPELPEAELPEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A      +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 Q--AAEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|251789676|ref|YP_003004397.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
 gi|247538297|gb|ACT06918.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
          Length = 360

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LE+ AG GG E+  +A  L RMY+R+AE R++K E +   DGE  G K     +
Sbjct: 107 DERGCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   +I+ +D RIDT
Sbjct: 167 VGDGAYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G    +IR+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLD 338


>gi|56965632|ref|YP_177366.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
 gi|61214582|sp|Q5WB55|RF1_BACSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56911878|dbj|BAD66405.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
          Length = 356

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 185/335 (55%), Gaps = 11/335 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78
           R  +LN +  DP++  N  + +   +E+  ++  +      K++ ++L D   +LE  L+
Sbjct: 11  RYEYLNEQLSDPNVISNATKLREYSKEQAQIEETVQTYRQYKQVTEQLADAKAMLEEKLD 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANML 137
           +D   +++E  D L   K E+E +    LL  +  D  +  +E+   AGG E+Q +A  L
Sbjct: 71  DDMYQMVKEELDELSERKAELEERLKILLLPKDPNDDKNVIVEIRGAAGGDEAQLFAADL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            +MY R+AE + +KTE +E H  E  G K    ++ G  AY  LK E G HR+ R+   +
Sbjct: 131 YKMYHRYAEMQGWKTEVIEAHATELGGYKEIIFMVNGSGAYSKLKYENGAHRVQRVPQTE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ VNTT SAVR+TH+PT
Sbjct: 191 SGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
             VV CQ E+SQ KNK +A  +LRA++++   Q  E  A   ES K  +G G    +IR+
Sbjct: 250 NTVVSCQDEKSQIKNKEKAMKVLRARIFDKVQQ--EAQAEYAESRKLAVGTGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           Y   P   V D R  +       VL G LD+ + A
Sbjct: 308 YNF-PQSRVTDHRIGLTLQKLEQVLQGKLDEIIDA 341


>gi|242239290|ref|YP_002987471.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
 gi|242131347|gb|ACS85649.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
          Length = 361

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/329 (37%), Positives = 185/329 (56%), Gaps = 17/329 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  ++   +ML RE   L +     +  Q +  D++   E+ L  DD  + +   D 
Sbjct: 25  DPSIISDMDRFRMLSREYAQLTDITRCFQRWQ-QAQDDIATAEMLL--DDPEMREMAQDE 81

Query: 92  LQRIK-----LEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           L+  +     LE + K    LL  + D     +LE+ AG GG E+  +A  L RMY+R+A
Sbjct: 82  LKEAREAGDTLEQQLKVL--LLPRDPDDERGCFLEIRAGTGGDEAALFAGDLFRMYSRYA 139

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R+++ E +   DGE  G K     + G  AYG LK E G HR+ R+   +S  R HTS
Sbjct: 140 ESRRWRVEMVSASDGEHGGYKEVIAKVIGEGAYGQLKFESGGHRVQRVPATESQGRIHTS 199

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P V ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ 
Sbjct: 200 ACTVAVMPEVPEAELPDINPVDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 259

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQHKNKA+A ++L A++   E+QKR++      + +  +G G    +IR+Y   P   
Sbjct: 260 ERSQHKNKAKALSVLAARIRAAEMQKRQQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGR 316

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V D R N+      + ++G LD  ++  +
Sbjct: 317 VTDHRINLTLYRLDEAIEGKLDMLIQPIV 345


>gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|46576754|sp|Q7W023|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576762|sp|Q7WQE9|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS]
          Length = 360

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 182/339 (53%), Gaps = 11/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL  ++    +P    ++   + L RER  L+  +           D     E+ L +
Sbjct: 13  AHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM-LSD 71

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136
            D   + E      R ++E E +    LL    D +D    +LE+ AG GG ES  ++  
Sbjct: 72  PDMKAMAEDEIKTGRARIE-EMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFSGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMYTR+AE R ++ E +   + E  G K     I G  AYG LK E G HR+ R+   
Sbjct: 131 LLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPAT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  D   +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH+P
Sbjct: 191 EAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITHVP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ +RSQH+NK +A  +L A+L + E+++R+  +      K+ IG G    +IR
Sbjct: 251 TGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+       +++GDLD+   A LA
Sbjct: 309 TYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLA 346


>gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
 gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
          Length = 358

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/346 (36%), Positives = 194/346 (56%), Gaps = 15/346 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD    V+ R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L    ++++  +L+E S +L+    E+E +Q + LL      D  D  +E+ A AG
Sbjct: 61  IEEMLNETSDKEEIEMLKEESSSLKNELPEME-EQLKLLLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +     S +L+G+LD+ + A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQILEGNLDEIIDA 340


>gi|261343909|ref|ZP_05971554.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
 gi|282568295|gb|EFB73830.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
          Length = 360

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 153/244 (62%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +   DGE  G K     I
Sbjct: 107 DEYNCFVEIRAGAGGDEAAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E G HR+ R+   +S  R HTS  +I V P + ++   EIS +D RIDT
Sbjct: 167 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTIAVLPELPEAELPEISPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMAKR 286

Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            E     E+S+    +G G    +IR+Y   P   V D R N+      +V++G LD  +
Sbjct: 287 HE----AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLI 341

Query: 348 KATL 351
           +  +
Sbjct: 342 QPII 345


>gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 356

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 192/332 (57%), Gaps = 10/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL    D+    
Sbjct: 15  LSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKELLSSNDEELKE 74

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142
               +  Q  + + +  +   +L    D ND     +E+ AGAGG E+  +A+ L RMY+
Sbjct: 75  MAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYS 134

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +AEK+ +K E +  ++ +  G K   L I G  AY  LK E GVHR+ R+   ++  R 
Sbjct: 135 MYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQRVPTTEAGGRI 194

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS +++ V P V++ +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+THIPTG+VV 
Sbjct: 195 HTSTATVAVLPEVEE-VDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVT 253

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
           CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I E+ K+++G G    +IR+Y   P
Sbjct: 254 CQDERSQIQNRERALKILRAKLYEMALQEQQR--EIAETRKSQVGTGERSERIRTYNF-P 310

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              V D R  +      +VLDGDLD+ + A +
Sbjct: 311 QGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|288942095|ref|YP_003444335.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
 gi|288897467|gb|ADC63303.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
          Length = 359

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/265 (41%), Positives = 160/265 (60%), Gaps = 10/265 (3%)

Query: 94  RIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           R +L+V   + ++LL    D ND   A+LE+ AG GG E+  +A  L+RMY R+AE   +
Sbjct: 86  RERLDVLEPELQTLLI-PPDPNDQCNAFLEIRAGTGGAEAALFAGDLMRMYMRYAELLGW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE +   +GE  G K   + + G   Y  LK E G HR+ R+   +S  R HTS  ++ 
Sbjct: 145 RTEQVSASEGELGGYKEVVIRVSGSGVYSRLKFEPGAHRVQRVPETESQGRIHTSACTVA 204

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P  +    IEI+ +D RIDTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQH
Sbjct: 205 VLPEAESIDAIEINSNDLRIDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQH 264

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
           KN+A+A ++L AKL  L   +  + +   ES K ++G G    +IR+Y   P   + D R
Sbjct: 265 KNRAKAMSLLHAKL--LAGARETQASEQSESRKLQVGSGDRSERIRTYNF-PQNRLTDHR 321

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
            N+      +V+ G LD  ++  LA
Sbjct: 322 INLTLYKLDEVMTGQLDQVIEPLLA 346


>gi|154248977|ref|YP_001409802.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
 gi|154152913|gb|ABS60145.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
          Length = 347

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/232 (46%), Positives = 149/232 (64%), Gaps = 7/232 (3%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + +LE+ AG GG E+  +A  LLRMY R++E+  + TE ++    +  G K   + IKG 
Sbjct: 96  NVFLEIRAGTGGEEAALFAGDLLRMYLRYSERMGWSTEIIDESKSDLGGYKEVVVRIKGK 155

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           N+  ++K E+GVHR+ RI   +S  R HTS +++ V P + D +++ I   D RIDTYRA
Sbjct: 156 NSGTYMKYERGVHRVQRIPVTESGGRIHTSTATVAVLPEMKD-VDVYIDPKDIRIDTYRA 214

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQ+VN T+SA+RITHIPTG+VV CQ ERSQH+NK +A  +LRAKLY  EL ++E+ 
Sbjct: 215 SGAGGQYVNKTESAIRITHIPTGIVVTCQSERSQHQNKEKAMMVLRAKLY--ELARKEQD 272

Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             +    K +IG G    +IR+Y   P   V D R N+   +   VLDGDLD
Sbjct: 273 EKLSSQRKNQIGSGERSEKIRTYNF-PQNRVTDHRINLTIYNLQAVLDGDLD 323


>gi|124265716|ref|YP_001019720.1| peptide chain release factor 1 [Methylibium petroleiphilum PM1]
 gi|166223569|sp|A2SD46|RF1_METPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124258491|gb|ABM93485.1| bacterial peptide chain release factor 1 (bRF-1) [Methylibium
           petroleiphilum PM1]
          Length = 359

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/364 (36%), Positives = 193/364 (53%), Gaps = 43/364 (11%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              D  V+RL+ L++   DP + ++    + L RE  H++  +S I E Q R        
Sbjct: 7   LQLDRYVRRLAELDSLLADPAVMRDAGGFRALSRE--HVE--VSGIVERQRRHAQR---- 58

Query: 74  ELALEEDDCSILQETSD----------------NLQRIKLEVEYKQFESLLSGEADSNDA 117
               E D  +  +  SD                 L R+  E+   Q   L     D+   
Sbjct: 59  ----ERDLAAAAEMASDPELAAMAAEEAASAQAELDRLATEL---QRLLLPRDPDDARSV 111

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           +LE+ AG GG ES  +A  LLRMYTR+AE++ ++ E L   D E  G K     I+G   
Sbjct: 112 FLEIRAGTGGDESALFAGDLLRMYTRYAERKGWRVELLSASDSELGGYKEVVARIEGDAV 171

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           +G LK E G HR+ R+   ++  R HTS  ++ V    D++ E+ ++ +D RIDTYRASG
Sbjct: 172 FGHLKYESGGHRVQRVPATETQGRIHTSACTVAVLAEPDEAQEVTLNPADLRIDTYRASG 231

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE---LELQKREE 294
           AGGQHVN TDSAVRITH+PTG+V +CQ +RSQH+NKA+A  +L A+L +   LE Q RE 
Sbjct: 232 AGGQHVNKTDSAVRITHLPTGLVAECQDDRSQHRNKAKAMAVLAARLRDKDRLERQARE- 290

Query: 295 IANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                 + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD  +KA +
Sbjct: 291 ----AATRKSLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYQLGAIMDGDLDPVVKALV 345

Query: 352 AIKK 355
           A ++
Sbjct: 346 AARE 349


>gi|261855644|ref|YP_003262927.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
 gi|261836113|gb|ACX95880.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
          Length = 364

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/334 (37%), Positives = 177/334 (52%), Gaps = 11/334 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   LN    DP +  N    + L +E   L + +  +   Q    D L   E   +E 
Sbjct: 15  ERYDELNALLSDPEVINNQDRFRSLSKEHARLHDLVVVLDRYQKAKAD-LQAAEHMSKEP 73

Query: 81  DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +     + ++ ++ E+E      +   L    AD  D  LE+ AG GG E+  +A  
Sbjct: 74  DREMAALALEEMKELQTEIESLDEALKVHLLPHDPADDGDVILEIRAGTGGDEAAIFAGD 133

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY ++A+ + ++TE L    GE  G +     I G   Y  LK E G HR+ R+   
Sbjct: 134 LLRMYLKYADTQGWRTEILSEQPGEHGGYREVIAQISGDGVYAALKFESGAHRVQRVPTT 193

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V PVV +S  I +  S  RIDT+RASGAGGQH+N TDSA+R+TH+P
Sbjct: 194 ETQGRVHTSAATVAVMPVVPESEAITLDPSTLRIDTFRASGAGGQHINKTDSAIRVTHLP 253

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ ERSQHKNKA+A ++L A+L + E QK    A    + K  +G G    +IR
Sbjct: 254 TGMVVECQDERSQHKNKARALSVLAARLADAERQKAH--AEQAATRKALVGSGDRSERIR 311

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +Y   P   V D R N+       VL GDLD  +
Sbjct: 312 TYNF-PQGRVTDHRINLTLYQLDRVLLGDLDPII 344


>gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1]
 gi|61214614|sp|Q6F9S2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 362

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/238 (43%), Positives = 147/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N AYLEV AG GG E+  ++  L RMY+++AE R ++ E L  ++GE  G K     +
Sbjct: 107 DANAAYLEVRAGTGGDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P VD    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH+PTGVVV+CQ+ERSQHKNKA+A  +L ++L   +   +
Sbjct: 227 YRASGAGGQHINKTDSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 ETATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|297180269|gb|ADI16488.1| protein chain release factor a [uncultured bacterium HF4000_05M23]
          Length = 360

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/349 (36%), Positives = 189/349 (54%), Gaps = 23/349 (6%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D  + V+RL        DP    N I  + L RE   L + +    +I     D    
Sbjct: 12  IADRHSEVERLMSQPETASDP----NAI--RRLGREYSQLQHVVELWNDITRAQSDMEGA 65

Query: 73  LELALEEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
            E+   EDD  +L+       E  + L  +  E+   + E L   E +  DA +EV AGA
Sbjct: 66  REMLTAEDDAEVLEMAKVEVEELQERLDSLTAEI---RLELLPKDETELADAVVEVRAGA 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  + RMY R+AE RK+K + L  +D    GIK  T  I G  AY  L  E 
Sbjct: 123 GGDEAGLFAAEVFRMYQRYAEARKWKLKILSQNDTGVGGIKEVTFEIAGERAYQRLHLES 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS +++ V P  ++ ++IEIS+ D ++D Y +SGAGGQ VN 
Sbjct: 183 GVHRVQRVPATESQGRIHTSTATVVVMPKAEE-VDIEISDKDLKVDVYHSSGAGGQSVNK 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
             +A+RITH+PTG+VVQCQ ERSQ +N+ QA  +LR++L+++EL+K++E   I  + K +
Sbjct: 242 LATAIRITHLPTGLVVQCQNERSQLQNRMQAMEILRSRLWDMELRKQQE--EISANRKAQ 299

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   + D R          VL G+LD F+ A L
Sbjct: 300 VGTGDRSEKIRTYNF-PQSRITDHRIGYTSHQMQQVLGGELDGFVDALL 347


>gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           32953]
 gi|81639458|sp|Q66AX5|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP
           32953]
          Length = 360

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     I
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
 gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
          Length = 361

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 149/234 (63%), Gaps = 6/234 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N+ +LEV AG GG E+  +A  L RMY+R+AE +K+K E +  ++GE  G K     I
Sbjct: 109 DNNNVFLEVRAGTGGDEAAIFAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   +S  R HTS  ++ V   + ++  IEI+ +D ++DT
Sbjct: 169 SGEGVYGKLKFESGVHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
              A      +  +G G    +IR+Y   P   + D R N+     ++V+ GDL
Sbjct: 289 H--AAEASERRNLVGSGDRSERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339


>gi|257452575|ref|ZP_05617874.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|257466434|ref|ZP_05630745.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917590|ref|ZP_07913830.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059115|ref|ZP_07923600.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313684791|gb|EFS21626.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313691465|gb|EFS28300.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 359

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/246 (45%), Positives = 151/246 (61%), Gaps = 9/246 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLL 171
           D N+  +E+  GAGG E+  +A  L RMY R+AE++K+K E +E  D E   G+K     
Sbjct: 106 DDNNVIVEIRGGAGGDEAAIFAGDLFRMYCRYAERKKWKIEIIEKQDLEGLDGLKEVAFS 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V+D  E+ I   D +ID
Sbjct: 166 IQGFGAYSKLKFESGVHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVHIDPKDLKID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+ GAGGQHVN TDSAVRITH+PTGV+VQCQ ERSQ KN+ +A   L +KL E+E++K
Sbjct: 226 TYRSGGAGGQHVNMTDSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEVEK 285

Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            R EI   GE  + ++G G    +IR+Y   P   + D R  +        LDGDLD+ +
Sbjct: 286 QRSEIE--GE-RRLQVGTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMI 341

Query: 348 KATLAI 353
            A +  
Sbjct: 342 DALITF 347


>gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
 gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
          Length = 360

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGEGVFGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|307244007|ref|ZP_07526126.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492531|gb|EFM64565.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
          Length = 354

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 169/286 (59%), Gaps = 20/286 (6%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSG----------EADSND---AYLEVHAGAGGTES 130
           IL+E SD   R   ++E  + E+LL              D ND     +E+  GAGG E+
Sbjct: 64  ILEEESDEDLRELAKMELSESEALLEEYENELKILLVPKDPNDEKNVIIEIRGGAGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+R +KT  +  ++    G K  + +IKG  AY  LK E GVHR+
Sbjct: 124 ALFAGDLFRMYSRYAERRGWKTSLMSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R HTS +++ V P V+D +EI+I+  D R+D +RASG GGQ VNTTDSAV
Sbjct: 184 QRIPTTESGGRIHTSTATVAVLPEVED-VEIDINPEDVRVDVFRASGNGGQCVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG VV CQ E+SQ KNK +A  +L+A+LY+  L ++++  +I    K+++G G 
Sbjct: 243 RLTHIPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQQK--DIAAERKSQVGTGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              +IR+Y   P   V D R N+        +DGDLD+ + A + +
Sbjct: 301 RSERIRTYNF-PQGRVSDHRINLTLYKLDSFIDGDLDEMIDALITV 345


>gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
 gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
          Length = 356

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 173/303 (57%), Gaps = 19/303 (6%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
           Q +D+A   +KE  D     ++  ELA  +  C            ++LE E +    L  
Sbjct: 56  QGMDDAREMLKEKLDDDFREMVEAELAELKAKC------------VRLEEELRIL-MLPK 102

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
              D  +  +E+ AGAGG E+  +A  L RMYTR+AE + ++ E L+ +  +  G K   
Sbjct: 103 DPNDEKNVIIEIRAGAGGDEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVV 162

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I+G  AY   K E GVHR+ R+   +++ R HTS  ++ V P  DD  ++ I+ SD R
Sbjct: 163 FSIQGDGAYSRFKYESGVHRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLR 222

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDTY ASGAGGQHVN T+SAVRITH+PTG+VVQCQ E+SQ KN+ +A  +LRAKL  LE 
Sbjct: 223 IDTYCASGAGGQHVNKTESAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKL--LEA 280

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            + E+ A + ++ K+++G G    +IR+Y   P   V D R  +       +L+GDLD+ 
Sbjct: 281 AQEEQRAQLAQTRKSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKLDFILNGDLDEL 339

Query: 347 MKA 349
           + A
Sbjct: 340 INA 342


>gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121]
 gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121]
          Length = 363

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++EV AG GG E+  +A  L RMY+R+AE +++K E +  ++GE  G K     I
Sbjct: 109 DGRNVFVEVRAGTGGDEASIFAGDLFRMYSRYAETQRWKVELISCNEGEHGGYKEVIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS  ++ + P +D+   IEI+++D R+DT
Sbjct: 169 VGEGAYSLLKFESGVHRVQRVPATESQGRIHTSACTVAIMPEMDEQDAIEINKADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ ERSQHKN+A+A  +L ++L   E +K 
Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMALLASRLQAAEEEKH 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +  E+ K+ +G G    +IR+Y   P   V D R N+      +++ GDLD+ ++ 
Sbjct: 289 AAEQS--ETRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDEIITGDLDNLVQP 345

Query: 350 TL 351
            +
Sbjct: 346 LI 347


>gi|225628073|ref|ZP_03786108.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|261220926|ref|ZP_05935207.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|225616898|gb|EEH13945.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|260919510|gb|EEX86163.1| peptide chain release factor 1 [Brucella ceti B1/94]
          Length = 377

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 53  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 345 KLDRVMEGDLDELVDALIS 363


>gi|23015680|ref|ZP_00055449.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/280 (41%), Positives = 169/280 (60%), Gaps = 14/280 (5%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           L E++   L+E    L+R   EV   Q   L   EAD  +A +EV AG GG E+  +A  
Sbjct: 74  LAEEEFYALKERLPALER---EV---QIMLLPKDEADEKNAIIEVRAGTGGEEAALFAAE 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+A    ++ E ++++D    G+K A+  I G N +  LK E GVHR+ R+   
Sbjct: 128 LFRMYERYASVHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVPAT 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ + P  ++ ++I++++SD R D YR+ G+GGQ VNTTDSAVR+THIP
Sbjct: 188 ESQGRIHTSAATVAIMPEAEE-VDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V CQQE+SQHKNKA A  +LRA+LYE E   ++  A    + K+++G G    +IR
Sbjct: 247 TGLAVACQQEKSQHKNKATALKLLRARLYERERSAKD--AERAAARKSQVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           +Y   P   V D R N+       V+ GD LD+ ++A +A
Sbjct: 305 TYNF-PQGRVTDHRINLTLYKIDAVMSGDALDELIEALVA 343


>gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
 gi|238688639|sp|B1KDU3|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
          Length = 361

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 197/345 (57%), Gaps = 23/345 (6%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L GL + +  V  L+ L+    DP +  +    + L +E   L++ +      Q +  ++
Sbjct: 9   LEGLLERNEEV--LALLS----DPSVIADQERFRALSKEYSQLEDVVKSFTAFQ-QATED 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGA 125
           L   +  L EDD  + +   + ++  K  LE    + + LL      D N+A++E+ AGA
Sbjct: 62  LEAAKEMLNEDDPELKEMAQEEMKEAKSVLETLEDELQILLLPKDPNDDNNAFIEIRAGA 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY++++E  +++ E +  ++GE  G K     I G   YG LK E 
Sbjct: 122 GGDEAAIFAGDLFRMYSKYSESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFES 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN 
Sbjct: 182 GGHRVQRVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNK 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSK 303
           TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR  EE     ES++
Sbjct: 242 TDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEE-----ESTR 296

Query: 304 TEI----GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             +        +IR+Y   P   + D R N+     ++V++G LD
Sbjct: 297 RNLVSSGDRSERIRTYNF-PQGRMSDHRINLTLYRLNEVMEGVLD 340


>gi|226492409|ref|NP_001142228.1| hypothetical protein LOC100274396 [Zea mays]
 gi|194707706|gb|ACF87937.1| unknown [Zea mays]
          Length = 416

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/261 (43%), Positives = 163/261 (62%), Gaps = 15/261 (5%)

Query: 99  VEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++++ F SLL   EAD  D  LEV AG GG E+  +A  + RMY ++A+K  +K + ++I
Sbjct: 150 LQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 209

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +    G K A+  I GP A+G LK E G+HR+ R+   + + R HTS  S+ V P  D+
Sbjct: 210 MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADE 269

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV  Q ERSQH NKA+A 
Sbjct: 270 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 328

Query: 278 NMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
            +LRA+LYELE ++    R ++ +  IG   ++E     +IR+Y   P   V D R  + 
Sbjct: 329 KVLRARLYELERRRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGVT 382

Query: 332 KTSPSDVLDGD-LDDFMKATL 351
             S +DV++G+ LD F+ A L
Sbjct: 383 HHSIADVMEGESLDMFVDALL 403


>gi|239947714|ref|ZP_04699467.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921990|gb|EER22014.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 355

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/349 (38%), Positives = 201/349 (57%), Gaps = 29/349 (8%)

Query: 16  WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           ++N  ++LS       F+    E   L   V + K   + +  L+ A +F  E+     D
Sbjct: 14  YENLGKKLSSGIMGDEFVKASKEYAELKDVVAKIKEYNKAKSELEEANNFKLEVG---LD 70

Query: 69  NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           N  L    + ED+   L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG
Sbjct: 71  NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L  MY R+AE + ++ E L I D    G K A+ LIKG + +  LK E GV
Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ ++I+I + D +IDTYRASGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLKIDTYRASGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPT + V  Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G
Sbjct: 240 SAVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|319407578|emb|CBI81228.1| peptide chain release factor 1 [Bartonella sp. 1-1C]
          Length = 359

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD     +E+ AG GG+E+  +A  L RMY R+A    +K E + + DGE  G K     
Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ RI   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRSEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +    S KT++G G    +IR+Y   P   V D R N+       +++GDL++ + 
Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELIN 341

Query: 349 ATLA 352
           A ++
Sbjct: 342 ALIS 345


>gi|241116888|ref|XP_002401657.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215493201|gb|EEC02842.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 358

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/349 (38%), Positives = 201/349 (57%), Gaps = 29/349 (8%)

Query: 16  WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           ++N  ++LS       F+    E   L   V + K   + +  L+ A +F  E+     D
Sbjct: 17  YENLGKKLSSGIMGDEFVKASKEYAELKDVVAKIKEYNKAKSELEEANNFKLEVG---LD 73

Query: 69  NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           N  L    + ED+   L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG
Sbjct: 74  NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L  MY R+AE + ++ E L I D    G K A+ LIKG + +  LK E GV
Sbjct: 124 EEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ ++I+I + D +IDTYRASGAGGQHVNTTD
Sbjct: 184 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLKIDTYRASGAGGQHVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPT + V  Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G
Sbjct: 243 SAVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVG 300

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 301 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 348


>gi|256158374|ref|ZP_05456272.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|256253793|ref|ZP_05459329.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|260169300|ref|ZP_05756111.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261758813|ref|ZP_06002522.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261738797|gb|EEY26793.1| peptide chain release factor 1 [Brucella sp. F5/99]
          Length = 359

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVDALIS 345


>gi|242089427|ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
 gi|241945831|gb|EES18976.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
          Length = 416

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 15/261 (5%)

Query: 99  VEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           ++++ F SLL   EAD  D  LEV AG GG E+  +A  + RMY ++A+K  +K + ++I
Sbjct: 150 LQHELFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 209

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +    G K A+  I GP A+G LK E G+HR+ R+   + + R HTS  S+ V P  D+
Sbjct: 210 MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAVLPQADE 269

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV  Q ERSQH NKA+A 
Sbjct: 270 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 328

Query: 278 NMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
            +LRA+LYELE  +    R ++ +  IG   ++E     +IR+Y   P   V D R  I 
Sbjct: 329 KVLRARLYELERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGIT 382

Query: 332 KTSPSDVLDGD-LDDFMKATL 351
             S +DV++G+ LD F+ A L
Sbjct: 383 HHSIADVMEGESLDVFVDALL 403


>gi|83319336|ref|YP_424135.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|90110051|sp|P71496|RF1_MYCCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83283222|gb|ABC01154.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 363

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/345 (36%), Positives = 192/345 (55%), Gaps = 25/345 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELAL 77
           +RL  +    ED ++ +++ +   L +E+ +L+  +  F+  K+  D + D   +LE   
Sbjct: 14  KRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAILE--- 70

Query: 78  EEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129
            E D  +++       E +D ++ ++  +E    E LL  +  D  +  +E+   AGG E
Sbjct: 71  NEKDSELIELAKIELDENNDKVEHLQQVIE----EMLLPKDPNDEKNVIIEIRGAAGGDE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR
Sbjct: 127 ANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSA
Sbjct: 187 VQRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A    + K  +G G
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R  +       V++G++D+F+ A +
Sbjct: 304 ARSEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347


>gi|15892685|ref|NP_360399.1| peptide chain release factor 1 [Rickettsia conorii str. Malish 7]
 gi|20139335|sp|Q92HK9|RF1_RICCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15619858|gb|AAL03300.1| peptide chain release factor RF-1 [Rickettsia conorii str. Malish
           7]
          Length = 355

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 193/333 (57%), Gaps = 22/333 (6%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
           F+    E   L   V + K   + +  L+ A +F  E+     DN  L    + ED+   
Sbjct: 30  FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83

Query: 85  LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+ +   L+R +K+ +       L   +ADS  A +EV AG+GG E+  +A +L  MY R
Sbjct: 84  LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE + +  E L I D    G K A+  IKG + +  LK E GVHR+ R+   +S  R H
Sbjct: 137 YAELKGWHFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  
Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQHKNKA+A  +LRA++YE E +K+E      +S + ++G G    +IR+Y   P 
Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             V D R N+      +V+ +G LD+F++A +A
Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|71065612|ref|YP_264339.1| peptide chain release factor 1 [Psychrobacter arcticus 273-4]
 gi|119361583|sp|Q4FSV3|RF1_PSYA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71038597|gb|AAZ18905.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           arcticus 273-4]
          Length = 362

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 173/294 (58%), Gaps = 17/294 (5%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123
            D   +L+ A + D   ++QE  D+ +   +E+E      +L    D ND   A+LE+ A
Sbjct: 63  ADAEAMLKEASDPDMKEMMQEEIDSARDTIVEMEEALNVMMLP--KDPNDKVPAFLEIRA 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  ++  L RMY ++A+ + +  E L  ++GE  G K     + G + YG LK 
Sbjct: 121 GTGGDEAAIFSGDLFRMYQKYAQAQGWTLEVLSANEGEHGGYKEIITRVSGNSVYGRLKF 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +S  R HTS  ++ V P V+    + ++ +D R DT+R+SGAGGQHV
Sbjct: 181 ESGVHRVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVNLNPADIRFDTFRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN------ 297
           NTTDSAVR+THIPTG VV+CQQERSQHKN+AQA  ML +K+ ++++Q + + A+      
Sbjct: 241 NTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRDL 300

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G   ++E     +IR+Y   P   + D R N+       +++GDLD+ + A L
Sbjct: 301 VGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALL 348


>gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N]
 gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N]
          Length = 356

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 11/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL  ++    DP    ++   + L RER  L+  +      Q    D     E+ L +
Sbjct: 9   AHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM-LAD 67

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136
            +   + E      R ++EV   + + LL    D ND    +LE+ AG GG ES  ++  
Sbjct: 68  PEMKAMAEEEIKAARERIEVLEGELQVLLLPR-DPNDGRSLFLEIRAGTGGDESALFSGD 126

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY+R+AE + ++ E +     E  G K     I G  AYG LK E G HR+ R+   
Sbjct: 127 LLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPAT 186

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH+P
Sbjct: 187 EAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+  +      K+ +G G    +IR
Sbjct: 247 TGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+       +L+GDL++   A LA
Sbjct: 305 TYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLA 342


>gi|265996886|ref|ZP_06109443.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|262551354|gb|EEZ07344.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
          Length = 372

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 48  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 104

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 164

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 339

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 340 KLDRVMEGDLDELVDALIS 358


>gi|319899228|ref|YP_004159321.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
 gi|319403192|emb|CBI76751.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
          Length = 357

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD     +E+ AG GG+E+  +A  L RMY R+A    +K E + + DGE  G K     
Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ RI   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +    S KT++G G    +IR+Y   P   V D R N+       +++GDL++ + 
Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELIN 341

Query: 349 ATLA 352
           A ++
Sbjct: 342 ALIS 345


>gi|295394649|ref|ZP_06804868.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972542|gb|EFG48398.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 359

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 181/322 (56%), Gaps = 8/322 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P +  N   A+ L R    LD      +E+   L D     ELA E  D +  +E    
Sbjct: 28  NPDVHANAGLARKLTRRYSELDQIAKTYRELNQCLSDVEDAKELASE--DPAFAEEAKSL 85

Query: 92  LQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +RI++ ++ K  E L+  + D + DA +EV AG GG ES  +A  L+RMY RWA+ R +
Sbjct: 86  EERIEV-LQDKLRELLIPKDPDDARDAIIEVKAGEGGDESALFAGDLVRMYQRWADHRGW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKG--PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            TE L+  +    G K  T+ IK      YGWLK E GVHR+ R+   +S  R HTS + 
Sbjct: 145 STEVLDSTEANLGGYKDITIAIKSREGGVYGWLKFEGGVHRVQRVPVTESQGRIHTSAAG 204

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V+P VD+  EI++ ++D +ID YR+SG GGQ VNTTDSAVRITH+PTG+V  CQ E+S
Sbjct: 205 VLVFPEVDEPEEIQLDDNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKS 264

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           Q +NK  A  MLRA++   + ++    AN +  S    +    +IR+Y   P   + D R
Sbjct: 265 QLQNKEAAMRMLRARILAKQAEEAAAEANDMRRSQVRTVDRSERIRTYNF-PENRIVDHR 323

Query: 328 TNIEKTSPSDVLDGDLDDFMKA 349
           T  +  +   VLDG LDD +++
Sbjct: 324 TGFKAYNLDQVLDGRLDDVVES 345


>gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
 gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
          Length = 360

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|212636630|ref|YP_002313155.1| peptide chain release factor 1 [Shewanella piezotolerans WP3]
 gi|226739120|sp|B8CQV2|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3]
          Length = 361

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/307 (36%), Positives = 177/307 (57%), Gaps = 7/307 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ +   K  Q +  ++L   +  +EEDD  + +   +  +  K  +E  
Sbjct: 36  RALSKEYSQLEDVVKAFKSFQ-QAEEDLESAKEMMEEDDAELKEMAQEEYKAAKETIETL 94

Query: 103 QFES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E     L     D N+ ++E+ AGAGG E+  +A  L RMY+++AE  +++ E +  +
Sbjct: 95  ESELQILLLPKDPNDDNNCFIEIRAGAGGDEAAIFAGDLFRMYSKYAESNRWQIEVMNTN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K     I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++
Sbjct: 155 EGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQRVPETESQGRVHTSACTVIVLPEIPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             IEI+++D ++DT+RASGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA +
Sbjct: 215 EAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR    +    +    G    +IR+Y   P   V + R N+      +
Sbjct: 275 VLSARIQAVEDEKRRSEEDSTRRNLVSSGDRSERIRTYNF-PQGRVSEHRINLTLYRLGE 333

Query: 338 VLDGDLD 344
            ++GD+D
Sbjct: 334 FMEGDID 340


>gi|294635783|ref|ZP_06714243.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
 gi|291090883|gb|EFE23444.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
          Length = 360

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     +
Sbjct: 107 DERNCFLEVRAGTGGDEAGLFAGDLFRMYSRYAEARRWRIEVMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   +I+ +D RIDT
Sbjct: 167 SGEGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +       + +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QR--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|623028|emb|CAA55563.1| unnamed protein product [Coxiella burnetii]
          Length = 361

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 147/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY R+AE + ++   +  H+GE  G K     +
Sbjct: 109 DERNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT
Sbjct: 169 IGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+
Sbjct: 229 FRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++        K+ +G G    +IR+Y   P   V D R N+      +V++GDLD  +
Sbjct: 289 DQ--EQAAKRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVI 343


>gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
 gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
          Length = 358

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/245 (44%), Positives = 151/245 (61%), Gaps = 6/245 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  + +LEV AG GG E+  +A  LLRMYTR+AE+ +++ E +  ++ +  G K    
Sbjct: 105 EDDGKNIFLEVRAGTGGDEAALFAADLLRMYTRYAERNRWQVEIVSANESDLGGYKEVIA 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AYG LK E G HR+ R+   +S  R HTS  ++ V P  D+  EI+++ ++ RI
Sbjct: 165 RIAGIGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPAELRI 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT+RASGAGGQH+N TDSA+RITH+PTG+VV+CQ  RSQH NKAQA  +L A+L   + Q
Sbjct: 225 DTFRASGAGGQHINKTDSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN--DKQ 282

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           KRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD+++  
Sbjct: 283 KREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEIT 341

Query: 348 KATLA 352
            A +A
Sbjct: 342 NALIA 346


>gi|119361511|sp|Q2KZZ3|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 11/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL  ++    DP    ++   + L RER  L+  +      Q    D     E+ L +
Sbjct: 13  AHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM-LAD 71

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136
            +   + E      R ++EV   + + LL    D ND    +LE+ AG GG ES  ++  
Sbjct: 72  PEMKAMAEEEIKAARERIEVLEGELQVLLLPR-DPNDGRSLFLEIRAGTGGDESALFSGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY+R+AE + ++ E +     E  G K     I G  AYG LK E G HR+ R+   
Sbjct: 131 LLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPAT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH+P
Sbjct: 191 EAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+  +      K+ +G G    +IR
Sbjct: 251 TGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+       +L+GDL++   A LA
Sbjct: 309 TYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLA 346


>gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
 gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
          Length = 361

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/343 (36%), Positives = 180/343 (52%), Gaps = 11/343 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R   L     DP +  N  + + L RE   +D  +   +    +  DNL      
Sbjct: 10  DKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYL-QAADNLDAARAM 68

Query: 77  LEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            ++ D  +     +E  D   R++   E  Q   L     D  + +LEV AG GG E+  
Sbjct: 69  QDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++A++R +K E +   +GE  G K     + G   Y  +K E G HR+ R
Sbjct: 129 FAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +    +   +I I   D RIDTYR+SGAGGQHVNTTDSAVRI
Sbjct: 189 VPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY  + Q+    A      K+ +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLSAKLY--DAQQNAAHAEQAAERKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      ++++GD+D+ + A LA
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLGELMEGDMDELLGALLA 348


>gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake]
 gi|119361538|sp|Q3YS23|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis
           str. Jake]
          Length = 359

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 157/244 (64%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A LE+ AG GG E+  +   L RMYT++AE++ +K E +        G K  +L I
Sbjct: 108 DARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSLCI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E GVHR+ R+   +++ R HTS +++ V P +++ ++++I E D RID 
Sbjct: 168 SGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEE-VDLKIDEKDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQHKNK +A  +LRA+LY LE QKR
Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLEKQKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348
           +  + I +  K++IG G    +IR+Y   P   + D R N+      D++ +G+LD+F+ 
Sbjct: 287 D--SEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGNLDEFID 343

Query: 349 ATLA 352
           A +A
Sbjct: 344 ALIA 347


>gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
 gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
          Length = 360

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|163843895|ref|YP_001628299.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
 gi|189039961|sp|B0CIC3|RF1_BRUSI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163674618|gb|ABY38729.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
          Length = 359

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIITTVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVDALIS 345


>gi|62290730|ref|YP_222523.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941]
 gi|82700642|ref|YP_415216.1| peptide chain release factor 1 [Brucella melitensis biovar Abortus
           2308]
 gi|189024940|ref|YP_001935708.1| peptide chain release factor 1 [Brucella abortus S19]
 gi|254694507|ref|ZP_05156335.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|254696132|ref|ZP_05157960.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254707598|ref|ZP_05169426.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|256258272|ref|ZP_05463808.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|260545992|ref|ZP_05821732.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260760500|ref|ZP_05872843.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261214824|ref|ZP_05929105.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261315085|ref|ZP_05954282.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|75496230|sp|Q57B22|RF1_BRUAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361513|sp|Q2YLN8|RF1_BRUA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689404|sp|B2S825|RF1_BRUA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62196862|gb|AAX75162.1| PrfA, peptide chain release factor 1 [Brucella abortus bv. 1 str.
           9-941]
 gi|82616743|emb|CAJ11828.1| Class I peptide chain release factor domain:Peptide chain release
           factor 1:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189020512|gb|ACD73234.1| Class I peptide chain release factor domain protein [Brucella
           abortus S19]
 gi|260096099|gb|EEW79975.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260670932|gb|EEX57753.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260916431|gb|EEX83292.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261304111|gb|EEY07608.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
          Length = 359

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVDALIS 345


>gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493]
 gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111]
 gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154]
 gi|30581025|sp|P47849|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039967|sp|A9KGY3|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039968|sp|A9N9K2|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058710|sp|B6J625|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           RSA 493]
 gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           Dugway 5J108-111]
 gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii
           CbuK_Q154]
          Length = 361

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 147/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY R+AE + ++   +  H+GE  G K     +
Sbjct: 109 DERNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT
Sbjct: 169 IGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+
Sbjct: 229 FRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++        K+ +G G    +IR+Y   P   V D R N+      +V++GDLD  +
Sbjct: 289 DQ--EQAAKRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVI 343


>gi|148558947|ref|YP_001259697.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|265987430|ref|ZP_06099987.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|148370204|gb|ABQ60183.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|264659627|gb|EEZ29888.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
          Length = 377

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 53  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 345 KLDRVMEGDLDELVDALIS 363


>gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM 10]
 gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua]
 gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516]
 gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F]
 gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|20139332|sp|Q8ZEX8|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361639|sp|Q1C854|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361640|sp|Q1CJK1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223619|sp|A4TJN7|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977371|sp|A7FIG1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687250|sp|A9QZ08|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688460|sp|B1JM85|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691366|sp|B2K2Z0|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM 10]
 gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Nepal516]
 gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Antiqua]
 gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Pestoides F]
 gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004]
 gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038]
 gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 360

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     I
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|293392123|ref|ZP_06636457.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952657|gb|EFE02776.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 360

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/296 (40%), Positives = 178/296 (60%), Gaps = 14/296 (4%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYL 119
           ++L  NL   +L L  DD  + +     ++  K E+E  +Q+  +L    D ND    YL
Sbjct: 56  NQLNSNLEEAQLLL--DDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYL 113

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG GG E+  +A  L RMY+R+AE +++  E L  ++ E+ G K    L+ G   YG
Sbjct: 114 EIRAGTGGDEAGIFAGDLFRMYSRYAETKRWHVEVLSENESEQGGFKEIIALVSGDGVYG 173

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYRASGAG
Sbjct: 174 QLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAG 233

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-I 298
           GQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L +   Q++E++A   
Sbjct: 234 GQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQ---QEQEKLAQEQ 290

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            ++ +  +G G    +IR+Y   P   V D R N+      +V++G +DD ++  +
Sbjct: 291 ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPII 345


>gi|271500557|ref|YP_003333582.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
 gi|270344112|gb|ACZ76877.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
          Length = 361

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LE+ AG GG E+  +A  L RMY+R+AE R++K E +   DGE  G K     +
Sbjct: 107 DERGCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P V ++   +I+ SD RIDT
Sbjct: 167 VGDGAYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMHKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G    +IR+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338


>gi|23502722|ref|NP_698849.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161619787|ref|YP_001593674.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|254700516|ref|ZP_05162344.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|254704887|ref|ZP_05166715.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|254708865|ref|ZP_05170676.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|254713712|ref|ZP_05175523.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|254715938|ref|ZP_05177749.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|256030391|ref|ZP_05444005.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|256370269|ref|YP_003107780.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260567639|ref|ZP_05838109.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|261217701|ref|ZP_05931982.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261316358|ref|ZP_05955555.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261321452|ref|ZP_05960649.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261751020|ref|ZP_05994729.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261755581|ref|ZP_05999290.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|32171563|sp|Q8FYK3|RF1_BRUSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039960|sp|A9M8K5|RF1_BRUC2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23348737|gb|AAN30764.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161336598|gb|ABX62903.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|256000432|gb|ACU48831.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260157157|gb|EEW92237.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|260922790|gb|EEX89358.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261294142|gb|EEX97638.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261295581|gb|EEX99077.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261740773|gb|EEY28699.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261745334|gb|EEY33260.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
          Length = 359

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVDALIS 345


>gi|294851112|ref|ZP_06791785.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
 gi|294819701|gb|EFG36700.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
          Length = 377

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 53  LASEYSELQDVVGKIRELSDARMEAS---DLAAMSDDASTDAEMRALAVEELPEVEKRIA 109

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 345 KLDRVMEGDLDELVDALIS 363


>gi|237816235|ref|ZP_04595228.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260758776|ref|ZP_05871124.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260884577|ref|ZP_05896191.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297247116|ref|ZP_06930834.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
 gi|237788302|gb|EEP62517.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260669094|gb|EEX56034.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260874105|gb|EEX81174.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297174285|gb|EFH33632.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
          Length = 377

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 53  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 169

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 345 KLDRVMEGDLDELVDALIS 363


>gi|123442667|ref|YP_001006644.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161451|ref|YP_004298028.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166223618|sp|A1JRU0|RF1_YERE8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122089628|emb|CAL12478.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605428|emb|CBY26926.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665681|gb|ADZ42325.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 360

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++     E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQ----AEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 353

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/243 (44%), Positives = 152/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ AGAGG E+  +A  L RMYT +AEK+ +K E +  +  E  G K   L I
Sbjct: 104 DEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   ++  R HTS +++ V P V+D ++IEI+ +D +ID 
Sbjct: 164 AGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVED-VDIEINPNDIKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ G GGQ VNTTDSAVR+THIPTG+V+ CQ ERSQ +N+ +A  +LRAKLYE+  +++
Sbjct: 223 FRSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEK 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   I  + K ++G G    +IR+Y   P   V D R  +       VLDGDLD+ + A
Sbjct: 283 EK--EISMTRKLQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDA 339

Query: 350 TLA 352
            LA
Sbjct: 340 LLA 342


>gi|238792551|ref|ZP_04636184.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
 gi|238728186|gb|EEQ19707.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
          Length = 360

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|323704815|ref|ZP_08116392.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535741|gb|EGB25515.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 353

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/243 (44%), Positives = 151/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ AGAGG E+  +A  L RMYT +AEK+++K E +  +  E  G K     I
Sbjct: 104 DEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   ++  R HTS +++ V P V+D ++IEI+ +D +ID 
Sbjct: 164 AGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVED-VDIEINPNDIKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ G GGQ VNTTDSAVR+THIPTG+V+ CQ ERSQ +N+ +A  +LRAKLYE+  +++
Sbjct: 223 FRSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEK 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E    I  + K ++G G    +IR+Y   P   V D R  +       VLDGDLD+ + A
Sbjct: 283 ER--EISMTRKLQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDA 339

Query: 350 TLA 352
            LA
Sbjct: 340 LLA 342


>gi|254731050|ref|ZP_05189628.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
          Length = 351

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 27  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 83

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 84  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 143

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 144 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 203

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 204 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 261

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 262 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 318

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 319 KLDRVMEGDLDELVDALIS 337


>gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
 gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
          Length = 360

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY+R+AEK ++K E +   + E  G +   + +
Sbjct: 107 DDKNIFLEIRAGTGGDESALFAADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   ++  R HTS  ++ V P  DD  ++ I+ +D RIDT
Sbjct: 167 IGNDVYSRLKFESGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSA+RITH PTG+VV+CQ +RSQHKNKAQA  +L A++ + ++Q  
Sbjct: 227 FRASGAGGQHINKTDSAIRITHFPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQ-- 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   V D R N+       ++DGD+D+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVNA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|313665080|ref|YP_004046951.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
 gi|312949513|gb|ADR24109.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
          Length = 363

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/345 (36%), Positives = 192/345 (55%), Gaps = 25/345 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELAL 77
           +RL  +    ED ++ +++ +   L +E+ +L+  +  F+  K+  D + D   +LE   
Sbjct: 14  KRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAILE--- 70

Query: 78  EEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129
            E D  +++       E +D ++ ++  +E    E LL  +  D  +  +E+   AGG E
Sbjct: 71  NEKDTELIELAKIELDENNDKVEHLQQVIE----EMLLPKDPNDEKNVIVEIRGAAGGDE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR
Sbjct: 127 ANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSA
Sbjct: 187 VQRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A    + K  +G G
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R  +       V++G++D+F+ A +
Sbjct: 304 ARSEKIRTYNY-PQNRVTDHRIGLTLNKLDQVMEGNIDEFIIALI 347


>gi|307265645|ref|ZP_07547198.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919289|gb|EFN49510.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 246

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/236 (44%), Positives = 154/236 (65%), Gaps = 7/236 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   ++  R HTS +++ V P V++ +++EI+ SD +ID +R+ G 
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPSDIKIDVFRSGGH 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I
Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQR--EI 177

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E+ K+++G G    +IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 232


>gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
 gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
          Length = 364

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/259 (42%), Positives = 157/259 (60%), Gaps = 17/259 (6%)

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           LEVE ++   L     D  + +LE+ AG GG E+  +A  L RMY+++AEK++++ E + 
Sbjct: 95  LEVEMQKL-LLPRDPNDDKNTFLEIRAGTGGDEAAIFAGDLFRMYSKYAEKKRWQVEVIS 153

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             DGE  G K   + I G + Y  LK E G HR+ R+   +S  R HTS  ++ V P  D
Sbjct: 154 QSDGEHGGYKEIIVRISGDSVYSHLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEAD 213

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           +   IEI+ +D +IDT+RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A
Sbjct: 214 ELDAIEINPADLKIDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNKAKA 273

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTE-----IGWG---RQIRSYVLQPYQMVKDLRT 328
            ++L+A+L   E  K        +S +TE     +G G    +IR+Y   P   + D R 
Sbjct: 274 MSVLQARLTAAEQAK-------AQSEQTEMRRNLVGTGDRSDRIRTYNF-PQGRMTDHRI 325

Query: 329 NIEKTSPSDVLDGDLDDFM 347
           N+      ++++GD+D  +
Sbjct: 326 NLTLYKLDEIMEGDIDQIV 344


>gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens
           MBEL55E]
 gi|61214602|sp|Q65TB1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 360

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 151/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +AYLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K    L+
Sbjct: 107 DEYNAYLEIRAGTGGDEAGIFAGDLFRMYSRYAEMKRWRVEVLSENESEQGGYKEIIALV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 167 SGDNVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A  +L ++L + E  K 
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALAVLASRLVQAEQDKL 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A    + +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 --AAEQATTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|153008371|ref|YP_001369586.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
 gi|166223580|sp|A6WXQ3|RF1_OCHA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151560259|gb|ABS13757.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
          Length = 357

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/348 (36%), Positives = 192/348 (55%), Gaps = 22/348 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R S + ++  +    +  ++   L  E   L   +  I+E+ D   + +   +L
Sbjct: 9   MDQLLKRFSMIESQMANNPDSETYVK---LASEYSELQEVVGKIRELTDSRKEAV---DL 62

Query: 76  ALEEDDCSI--------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           A   DD S         L+E     +RI+   +  Q   L    AD  +A LE+ AG GG
Sbjct: 63  AAMRDDASTDAEMRALALEELPGVEKRIEGLEQEVQILLLPKDAADEKNAILEIRAGTGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GV
Sbjct: 123 LEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  +D I+IEI   D RIDT RASGAGGQHVNTTD
Sbjct: 183 HRVQRVPETEAGGRIHTSAATVAVLPEAED-IDIEIRNEDIRIDTMRASGAGGQHVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK +      ES ++++G
Sbjct: 242 SAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAD--TERSESRRSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 299 SGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 361

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 190/336 (56%), Gaps = 21/336 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELA 76
           V+R   +     DP +  +    + L +E   L+  + +F+  KE QD L       E  
Sbjct: 13  VERYEEVQALLSDPSVISDQNRFRALSKEYSELEEIVKTFLNYKETQDDLAS----AEEM 68

Query: 77  LEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L++ D  + +   +  +  K ++    +  Q   L     D+N+ ++EV AG GG E+  
Sbjct: 69  LKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R
Sbjct: 129 FAGDLFRMYSRYAENKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R+
Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--IGWG- 309
           THIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR    +  E+S+    +G G 
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKR----HAAEASERRDLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
              +IR+Y   P   + D R N+     ++V+ GDL
Sbjct: 305 RSERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339


>gi|169824785|ref|YP_001692396.1| peptide chain release factor 1 [Finegoldia magna ATCC 29328]
 gi|303235021|ref|ZP_07321645.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
 gi|238687758|sp|B0S2B6|RF1_FINM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167831590|dbj|BAG08506.1| bacterial peptide chain release factor 1 [Finegoldia magna ATCC
           29328]
 gi|302493876|gb|EFL53658.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
          Length = 355

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 194/340 (57%), Gaps = 11/340 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +     E
Sbjct: 4   NLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDKE 63

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTES 130
           L     D  + +   D +  ++ ++E  Q E  +L    D ND    ++E+ AGAGG E+
Sbjct: 64  LLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMY  +++K+ + TE ++I      GIK   +++KG  AY  LK E GVHR+
Sbjct: 124 GLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P  +D ++++I + D RID +RASG GGQ VNTTDSAV
Sbjct: 184 QRVPQTESSGRIHTSTATVAVLPEAED-VDVKIEQKDLRIDVFRASGNGGQCVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV CQ E+SQ KNK +A  +L+++LY  +L + E+  +  ++ K+++G G 
Sbjct: 243 RITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLY--DLMEEEKNKDRADARKSQVGTGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +IR+Y   P   + D R N       + LDGD+++ +
Sbjct: 301 RSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMI 339


>gi|289423330|ref|ZP_06425138.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
 gi|289156261|gb|EFD04918.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
          Length = 354

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 191/339 (56%), Gaps = 19/339 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEED-- 80
           L+ K  DP +  +    + LM+E   L+  +   +E   + + + ++  +LE   +ED  
Sbjct: 15  LSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAESKQILEEESDEDLR 74

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANML 137
           + + ++ +    Q + +E E K    LL    D ND     +E+  GAGG E+  +A  L
Sbjct: 75  ELAKMELSEAESQIVDIEDELK----LLLVPKDPNDEKNVIVEIRGGAGGDEAALFAGDL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+AE++ +KT  +  ++    G K  + LIKG  AY  LK E GVHR+ RI   +
Sbjct: 131 FRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESGVHRVQRIPTTE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P VDD +E++I+  D R D +RASG GGQ VNTTDSAVR+THIPT
Sbjct: 191 SGGRIHTSTATVAVLPEVDD-VEVQINPEDLRFDVFRASGNGGQCVNTTDSAVRLTHIPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G VV CQ E+SQ KNK +A  +L+A+LY+  L  +++   I    K+++G G    +IR+
Sbjct: 250 GEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQK--EISAERKSQVGTGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           Y   P   V D R N+        +DGD+D+ +   + +
Sbjct: 308 YNF-PQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITV 345


>gi|212213424|ref|YP_002304360.1| peptide chain release factor 1 [Coxiella burnetii CbuG_Q212]
 gi|238058711|sp|B6J390|RF1_COXB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212011834|gb|ACJ19215.1| bacterial peptide chain release factor 1 [Coxiella burnetii
           CbuG_Q212]
          Length = 361

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 150/247 (60%), Gaps = 9/247 (3%)

Query: 107 LLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
           LL    D ND    +LE+ AG GG E+  +A  L RMY R+AE + ++   +  H+GE  
Sbjct: 100 LLLVPKDPNDELNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHG 159

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K     + G   Y  LK E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I
Sbjct: 160 GFKEVIARVIGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKI 219

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           + ++ RIDT+RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A ++L++K
Sbjct: 220 NPAELRIDTFRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSK 279

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           L   E  K+++        K+ +G G    +IR+Y   P   V D R N+      +V++
Sbjct: 280 LLAAERAKQDQ--EQAAKRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYQLDEVIE 336

Query: 341 GDLDDFM 347
           GDLD  +
Sbjct: 337 GDLDPVI 343


>gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
 gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
          Length = 355

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/338 (36%), Positives = 180/338 (53%), Gaps = 9/338 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL  ++    +P +  ++   + + RER  LD  ++          D     E+ + +
Sbjct: 9   AHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIKTAQEM-MAD 67

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANML 137
            D   + E    L + KLE      + LL      DS   YLE+ AG GG ES  +A  L
Sbjct: 68  PDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDESALFAGDL 127

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMYTR+AE   ++ E +   D E  G K     + G   YG LK E G HR+ R+   +
Sbjct: 128 LRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHRVQRVPATE 187

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVR+TH+PT
Sbjct: 188 TQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSAVRVTHLPT 247

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV+CQ +RSQH+NK +A  +L A+L   + Q++E+        K+ +G G    +IR+
Sbjct: 248 GLVVECQDDRSQHRNKDKALQVLAARLK--DKQQQEQHDKEAAQRKSLVGTGDRSERIRT 305

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           Y   P   V D R N+       ++DGDL++   A LA
Sbjct: 306 YNY-PQGRVTDHRINLTLYKLGHIMDGDLNELTNALLA 342


>gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
 gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
          Length = 358

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1]
 gi|81598974|sp|Q5P7G7|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1]
          Length = 359

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/241 (43%), Positives = 151/241 (62%), Gaps = 6/241 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  + +LEV AG GG E+  +A  LLRMYTR+AE++++K E +     +  G K   L 
Sbjct: 106 SDERNLFLEVRAGTGGDEASLFAGDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILR 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  AY  LK E G HR+ RI   ++  R HTS  ++ V P  D+   + I+ +D RID
Sbjct: 166 IAGAGAYSKLKFESGGHRVQRIPVTETQGRIHTSACTVAVMPEADEVEAVNINPADLRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+N+AQA ++L A++ + +L  
Sbjct: 226 TFRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQL-- 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           RE+ A    + K+ +G G    +IR+Y   P   V D R N+       V+ GDLD+ + 
Sbjct: 284 REQQAREAATRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDAVMQGDLDELVD 342

Query: 349 A 349
           A
Sbjct: 343 A 343


>gi|121602027|ref|YP_988678.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
 gi|166223530|sp|A1URS5|RF1_BARBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120614204|gb|ABM44805.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
          Length = 359

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A +E+ AG GG+E+  +A  L RMY R+A   K+K E + + D E  G K     
Sbjct: 107 ADEKSAIIEIRAGTGGSEAALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   +++ R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ISGKGVFSKLKFESGVHRVQRVPETETSGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LR++L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRSRLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +    S KT++G G    +IR+Y   P   V D R N+       +++GDLD+ + 
Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLDELIN 341

Query: 349 ATLA 352
             ++
Sbjct: 342 PLIS 345


>gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
 gi|119361580|sp|Q4K695|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
          Length = 360

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  G K     +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D RIDT
Sbjct: 169 EGESVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSA+RITHIP+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q+ 
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQT 285

Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              AN I    K  +G G    +IR+Y   P   V D R N+   S  ++L G ++  ++
Sbjct: 286 SAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLDEILAGGVEAVIE 344

Query: 349 ATLA 352
             LA
Sbjct: 345 PLLA 348


>gi|319404588|emb|CBI78194.1| peptide chain release factor 1 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 359

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD     +E+ AG GG+E+  +A  L RMY R+A    +K E + + DGE  G K     
Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ RI   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +    S KT++G G    +IR+Y   P   V D R N+       +++GDL++ + 
Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELIN 341

Query: 349 ATLA 352
           A ++
Sbjct: 342 ALIS 345


>gi|262369773|ref|ZP_06063101.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
 gi|262315841|gb|EEY96880.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
          Length = 362

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/238 (43%), Positives = 146/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N AYLE+ AG GG E+  ++  L RMYT++AE + ++ E L  ++GE  G K    L+
Sbjct: 107 DANSAYLEIRAGTGGDEAAIFSGDLYRMYTKYAESQGWRIEVLSENEGEHGGYKEIICLV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ SD RIDT
Sbjct: 167 NGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLASRLESAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       V++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELL 341


>gi|265982882|ref|ZP_06095617.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306838261|ref|ZP_07471111.1| peptide chain release factor 1 [Brucella sp. NF 2653]
 gi|264661474|gb|EEZ31735.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306406664|gb|EFM62893.1| peptide chain release factor 1 [Brucella sp. NF 2653]
          Length = 359

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARKEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVNALIS 345


>gi|297588765|ref|ZP_06947408.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
 gi|297574138|gb|EFH92859.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
          Length = 355

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 197/348 (56%), Gaps = 27/348 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +      
Sbjct: 4   NLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKN------ 57

Query: 75  LALEED--------DCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVH 122
             LEED        D  + +   D +  ++ ++E  Q +  +L    D ND    ++E+ 
Sbjct: 58  --LEEDKEMLGTTGDSEMEELLKDEISTLEEQIEKDQEDLKILLLPKDPNDEKNVFIEIR 115

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG E+  +A  LLRMY  +++K+++ TE ++I      GIK   +++KG  AY  LK
Sbjct: 116 AGAGGDEAGLFAGELLRMYQMYSDKKRWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLK 175

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S+ R HTS +++ V P  +D ++++I + D RID +RASG GGQ 
Sbjct: 176 YESGVHRVQRVPQTESSGRIHTSTATVAVLPEAED-VDVKIEQKDLRIDVFRASGNGGQC 234

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ KNK +A  +L+++LY  +L + E+  +  ++ 
Sbjct: 235 VNTTDSAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLY--DLMEEEKNKDRADAR 292

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           K+++G G    +IR+Y   P   + D R N       + LDGD+++ +
Sbjct: 293 KSQVGTGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMI 339


>gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
 gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
          Length = 358

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|146329088|ref|YP_001209002.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
 gi|146232558|gb|ABQ13536.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
          Length = 365

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/332 (37%), Positives = 186/332 (56%), Gaps = 15/332 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   LN    DP +  +    +   +E   L   +   +EI+    +   L EL   ED
Sbjct: 17  ERYEELNALLADPSVAADPDLLRRYGQEHAQLAPIVEIFQEIEHLQQEANDLKEL---ED 73

Query: 81  DCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
           D  + +    E S+NL++ + E E K    ++  +  D  + +LE+ AG GG E+  +A 
Sbjct: 74  DAEMAEYVAAEQSENLKKTE-ECEQKLARLMIPQDPLDEANIFLEIRAGTGGDEAAIFAG 132

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L+RMY R+AE R ++   L  + GE  G +     + G   Y  LK E G HR+ R+  
Sbjct: 133 DLMRMYARFAENRGWQISVLSENAGEFGGYREIICRVSGQRVYSTLKFESGAHRVQRVPE 192

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +++ R HTS +++ V P  D+  +IEI+ +D R+DT+RASGAGGQHVN TDSA+RITH+
Sbjct: 193 TEASGRIHTSAATVAVLPESDEIEDIEINPADLRVDTFRASGAGGQHVNKTDSAIRITHL 252

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ+ERSQHKN+A+A   L AKL + E Q  E+   I    K+ +G G    +I
Sbjct: 253 PTGIVVECQEERSQHKNRAKAMRWLYAKLMDRERQAAEK--EIAAERKSLVGTGDRSERI 310

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           R+Y   P   V D R N+   +  DVL+G LD
Sbjct: 311 RTYNY-PQGRVTDHRINLTLYALDDVLNGQLD 341


>gi|253688500|ref|YP_003017690.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585241|sp|C6DHY1|RF1_PECCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|251755078|gb|ACT13154.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 360

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   DGE  G K     I
Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 VV 345


>gi|83644569|ref|YP_433004.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
 gi|119361548|sp|Q2SL95|RF1_HAHCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83632612|gb|ABC28579.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
          Length = 360

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 152/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D ++ +LE+ AG GG E+  +A  L RMY+R+AE +K+K E +    GE  G K     +
Sbjct: 109 DGSNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAELKKWKVEIVSESPGEHGGYKEVISRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E G HR+ R+   +S  R HTS  ++ + P V++  +++I+ +D R+DT
Sbjct: 169 AGDNVFNLLKFESGAHRVQRVPETESQGRIHTSACTVAILPEVEEVGDVDINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSA+RITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL  L   + 
Sbjct: 229 YRASGAGGQHVNKTDSAIRITHLPSGIVVECQDERSQHKNRAKAMSLLKAKL--LSSAQE 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++     ++ K+ +G G    +IR+Y   P   + D R N+      +V+ GDLD  ++ 
Sbjct: 287 KQAKEQAQTRKSLVGSGDRSERIRTYNY-PQGRITDHRINLTLYKLEEVVQGDLDPVIQP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25]
          Length = 362

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 184/327 (56%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L RE   L+      +  Q +  ++L+  E    EDD  + +   + 
Sbjct: 25  DPDVIGDQDKFRALSREYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+     ++V++GDL   +   +
Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLIDPVI 347


>gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 358

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|254717939|ref|ZP_05179750.1| peptide chain release factor 1 [Brucella sp. 83/13]
          Length = 351

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 27  LASEYSELQDVVGKIRELSDARKE---ASDLAAMRDDASTDAEMRALAVEELPEVEKRIA 83

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 84  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 143

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 144 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 203

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 204 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 261

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 262 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 318

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 319 KLDRVMEGDLDELVNALIS 337


>gi|50121117|ref|YP_050284.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
 gi|61214611|sp|Q6D551|RF1_ERWCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49611643|emb|CAG75092.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 360

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   DGE  G K     I
Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++   +I+ SD RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAAVPEAELPDINPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQP 343

Query: 350 TL 351
            +
Sbjct: 344 VV 345


>gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
 gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
          Length = 358

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|227111330|ref|ZP_03824986.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 360

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   DGE  G K     I
Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 VV 345


>gi|212711979|ref|ZP_03320107.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
 gi|212685501|gb|EEB45029.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
          Length = 360

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AGAGG E+  +A  L RMY+R+AE  +++ E +   DGE  G K     I
Sbjct: 107 DEYNCFVEIRAGAGGDEAAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E G HR+ R+   +S  R HTS  +I + P + ++   EIS +D RIDT
Sbjct: 167 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTIAILPELPEAELPEISPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A      +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 H--AAEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116]
 gi|166223617|sp|A7MY68|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116]
          Length = 362

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 182/323 (56%), Gaps = 11/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  + + L +E   L+      +  Q +  D+L   E    EDD  + +   + 
Sbjct: 25  DPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEDMANEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347
           D R N+     ++V++GDL   +
Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLI 343


>gi|212697120|ref|ZP_03305248.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675895|gb|EEB35502.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 263

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 156/243 (64%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ AGAGG E+  +A  L RMY  +A+K+ +KTE +++      G+K AT ++
Sbjct: 12  DHKDVIVEIRAGAGGEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIV 71

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  D+ ++I+I  +D R D 
Sbjct: 72  RGEGAYSKLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEADE-VDIKIDPNDIRTDV 130

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA+LYE+E +KR
Sbjct: 131 YRSSGNGGQSVNTTDSAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKR 190

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   I ++ K+++G G    +IR+Y   P   + D R N       D LDG++++ + +
Sbjct: 191 QK--EISDNRKSQVGTGDRSERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIDS 247

Query: 350 TLA 352
            + 
Sbjct: 248 LIT 250


>gi|319408172|emb|CBI81825.1| peptide chain release factor 1 [Bartonella schoenbuchensis R1]
          Length = 359

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A +E+ AG GG+E+  +A  L RMY R+A    +K E + + DG+  G K     
Sbjct: 107 ADEKSAIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ RI   ++  R HTS +++ V P  ++ I+I I   D RID
Sbjct: 167 VSGKGVFSKLKFESGVHRVQRIPETEAGGRIHTSAATVAVLPEAEE-IDIAIHPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+ +A  +LRA+L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E      ES KT+IG G    +IR+Y   P   V D R N+       V++GDLD+ + 
Sbjct: 285 AEN--ERSESRKTQIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELIH 341

Query: 349 ATLA 352
           A ++
Sbjct: 342 ALIS 345


>gi|83310717|ref|YP_420981.1| protein chain release factor A [Magnetospirillum magneticum AMB-1]
 gi|119361556|sp|Q2W6V3|RF1_MAGMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82945558|dbj|BAE50422.1| Protein chain release factor A [Magnetospirillum magneticum AMB-1]
          Length = 354

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/280 (41%), Positives = 169/280 (60%), Gaps = 14/280 (5%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           L E++   L+E    L+R   EV   Q   L   EAD  +A +EV AG GG E+  +A  
Sbjct: 74  LAEEEFYALKERLPALER---EV---QIMLLPKDEADEKNAIIEVRAGTGGEEAALFAAE 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+A    ++ E ++++D    G+K A+  I G N +  LK E GVHR+ R+   
Sbjct: 128 LFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVPAT 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ + P  ++ ++I++++SD R D YR+ G+GGQ VNTTDSAVR+THIP
Sbjct: 188 ESQGRIHTSAATVAIMPEAEE-VDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V CQQE+SQHKNKA A  +LRA+LYE E   ++  A    + K+++G G    +IR
Sbjct: 247 TGLAVACQQEKSQHKNKATALKLLRARLYERERSAKD--AERAAARKSQVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           +Y   P   V D R N+       V+ GD LD+ ++A +A
Sbjct: 305 TYNF-PQGRVTDHRINMTLYKIDAVMSGDALDELVEALVA 343


>gi|103488191|ref|YP_617752.1| peptide chain release factor 1 [Sphingopyxis alaskensis RB2256]
 gi|119361612|sp|Q1GPK3|RF1_SPHAL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|98978268|gb|ABF54419.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingopyxis
           alaskensis RB2256]
          Length = 355

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 158/245 (64%), Gaps = 9/245 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           ADS  A LE+ AG GG E+  +A  LLRMY+R+A+ + +K E +  ++ E  G K     
Sbjct: 104 ADSRAAMLEIRAGTGGDEAALFAGDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVAS 163

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++ I++SD +ID
Sbjct: 164 VSGQGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDVAINDSDLKID 222

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVNTTDSA+RITHIPTG+VV  Q +RSQHKN+A+A  +LRA+LY+LE   
Sbjct: 223 IYRASGAGGQHVNTTDSAIRITHIPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLE--- 279

Query: 292 REEIANIGESS-KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RE++ +   S+ K+ +G G    +IR+Y   P   V D R N+      ++L+G +D+ +
Sbjct: 280 REKLHSAEASARKSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGAMDELI 338

Query: 348 KATLA 352
            A +A
Sbjct: 339 DALIA 343


>gi|210623300|ref|ZP_03293717.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
 gi|210153701|gb|EEA84707.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
          Length = 355

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 167/286 (58%), Gaps = 20/286 (6%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEA----------DSND---AYLEVHAGAGGTES 130
           ILQE SD   R   ++E    ES +              D ND     +E+  GAGG E+
Sbjct: 64  ILQEESDEELRELAKMELSDMESQVEPLEEELKLLLVPKDPNDEKNVIVEIRGGAGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMY+R+AE++ +K   L  ++    G K  + +IKG  AY  LK E GVHR+
Sbjct: 124 ALFAGDLLRMYSRYAERKGWKVSMLSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R HTS +++ V P V+D +E+EI+++D RID +RASG GGQ VNTTDSAV
Sbjct: 184 QRIPSTESGGRIHTSTATVAVLPEVED-VEVEINDNDIRIDVFRASGNGGQCVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG VV CQ E+SQ KNK +A  +L+A+LY+  L  +++   I    K+++G G 
Sbjct: 243 RITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDRALADQQK--EISAERKSQVGTGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              +IR+Y   P   + D R N+        LDGD+D+ + A + +
Sbjct: 301 RSERIRTYNF-PQGRISDHRINLTLYKLDSFLDGDIDEMIDALITV 345


>gi|310779238|ref|YP_003967571.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
 gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
          Length = 357

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/244 (41%), Positives = 151/244 (61%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +A  L RMY R+AE+ K+KTE +   +    G+K     I
Sbjct: 106 DDKNVIIEIRGGTGGDEAALFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S+ R HTS +++ V P VDD  ++EI  S+ +IDT
Sbjct: 166 QGQGAYSKLKFESGVHRVQRVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSAVRITH+P+GV+V+CQ ERSQ KN+ +A  +L  KL+E+E++K+
Sbjct: 226 FRSSGAGGQHVNTTDSAVRITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +  + K ++G G    +IR+Y   P   + D R  +        LDGDL + + A
Sbjct: 286 R--SEVESTRKLQVGTGSRSEKIRTYNY-PQGRITDHRIKLTLHKLDAFLDGDLTEMIDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LITF 346


>gi|255525833|ref|ZP_05392762.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
 gi|255510476|gb|EET86787.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
          Length = 358

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 197/355 (55%), Gaps = 36/355 (10%)

Query: 20  VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           ++RL F+  K E       DP +  +  E + L +E   L+  +  IK  Q R  +  + 
Sbjct: 2   LERLEFIENKYEELSAKISDPSIMADQKEWQKLCKEHAELETLV--IKYRQYRKAEEEL- 58

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----------LLSGEADSND---AYL 119
                 E +  +L++ +D   R  ++ + K+ E+          +L    D ND    ++
Sbjct: 59  ------ESNKEMLKDETDKDMRDMIQEDIKELEASMDEARQELRILLLPKDPNDDKNVFV 112

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+  GAGG E+  +A  L RMYTR+AE++ +K E + ++  +  G K    +IKG  AY 
Sbjct: 113 EIRGGAGGEEAALFAANLTRMYTRYAERKGWKVETISLNATDIGGFKEIVFMIKGAGAYS 172

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHR+ R+   +S+ R HTS +++ V P VDD +++ I+ +D RID +RASG G
Sbjct: 173 RLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDD-VDLVINANDIRIDVFRASGHG 231

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A  +L+++L+E    +R   A I 
Sbjct: 232 GQCVNTTDSAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLFERAEAERS--AGIA 289

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E  K+++G G    +IR+Y   P   V D R  +        LDGD+D+ + A +
Sbjct: 290 EDRKSQVGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSYLDGDIDEVIDALI 343


>gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 360

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+ +++ E +     +  G K   + +
Sbjct: 107 DERNLFLEIRAGTGGDESALFAGDLLRMYTRYAERNRWQVEMVSESSSDVGGYKEVIVRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P VD+  +++I+ SD RIDT
Sbjct: 167 IGNGAYSRLKFESGGHRVQRVPTTETQGRIHTSACTVAVMPEVDEISDVDINPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNKA A  +L A++   + Q R
Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKASALKVLAARIK--DAQVR 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ +    + K+ IG G    +IR+Y   P   + D R N+       ++DGDL+D   A
Sbjct: 285 EQQSKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLNDLTGA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
 gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
          Length = 361

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/333 (37%), Positives = 191/333 (57%), Gaps = 16/333 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  DP +  NV E  +L ++   L   +   +E   R  +  +    +LE+ + + +
Sbjct: 20  IEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQEY--RQVEAGLAEAKSLEDSEDAEM 77

Query: 86  -----QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139
                +E +  ++R++ E+E +    LL  +  D  D  +E+ AG GG E+  +A  L R
Sbjct: 78  AELAKEEAASAVKRLE-EIEAELHRQLLPKDPNDEKDVIVEIRAGTGGDEASLFAADLYR 136

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+ E+  +++E +E ++ E  G K     +KG  AY  LK E GVHR+ R+   +++
Sbjct: 137 MYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGAYSKLKFESGVHRVQRVPATEAS 196

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P  +D +EIEI   D  IDTYR+SGAGGQHVN TDSAVRITH PTG+
Sbjct: 197 GRIHTSAATVAVMPQAED-VEIEIRPEDLDIDTYRSSGAGGQHVNMTDSAVRITHKPTGL 255

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV CQ ERSQ KN+A+A  +LRA+LY+LELQK++  +    + +  IG G    +IR+Y 
Sbjct: 256 VVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQ--SEEASTRRGMIGSGDRSERIRTYN 313

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             P   V D R  +       +LDGD+ + + A
Sbjct: 314 F-PQNRVTDHRIGLTLYKLDYMLDGDIYEMIDA 345


>gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
 gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
          Length = 362

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 182/327 (55%), Gaps = 11/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +    + L +E   L+  I      +    D     E+A  EDD  + +   + 
Sbjct: 25  DPSVISDQDRFRSLSKEYSQLEEVIKCFSAYKQAESDLEAAQEMA-NEDDPEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K ++E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AE 
Sbjct: 84  VKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAAIFAGDLFRMYSRFAES 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +  + GE  G K     + G  AYG +K E G HR+ R+   +S  R HTS  
Sbjct: 144 KGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ + P + ++   EI+ +D +IDT+R+SGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A+L + E +KR   A    + +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARLIKAEEEKR--AAEQASTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+      +V++GDLD  ++  +
Sbjct: 321 DHRINLTVYRLDEVMEGDLDSLIQPII 347


>gi|325479514|gb|EGC82610.1| peptide chain release factor 1 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 358

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/335 (36%), Positives = 189/335 (56%), Gaps = 15/335 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLELALEEDDC 82
           L  K  DP +  ++ +   + RE   L   +     IKE +D + +N  L+  A ++D  
Sbjct: 15  LEKKMIDPEVLSDIAKLTKITREYNSLKPIVEKYDQIKEAEDTIEENKELINEADDQDMV 74

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
            +L+E     +  KL  EY +   +L       DS D  +E+  GAGG E+  +A  L R
Sbjct: 75  EMLKEEIKENE--KLLDEYNEEMKILLIPKDPNDSRDVIIEIRPGAGGDEAGLFAGDLYR 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY  +A+K  +KTE +E+      GIK AT +I+G  AY   K E GVHR+ R+   +S 
Sbjct: 133 MYHMYADKEGYKTEDVEVSSQGVGGIKDATFMIRGEGAYSRFKYESGVHRVQRVPETESG 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P VD+ +++ +  +D R D +R+SG GGQ VNTTDSAVR+THIPTG+
Sbjct: 193 GRIHTSTATVAVLPEVDE-LDVHVDPNDIRTDVFRSSGNGGQSVNTTDSAVRLTHIPTGI 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV  Q E+SQ KNK +A  +L A++YELE +KR +   I ++ K+++G G    +IR+Y 
Sbjct: 252 VVSMQDEKSQIKNKEKAMRILLARIYELEEEKRNK--EIADNRKSQVGTGDRSERIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   + D R N       D L+G++ + + + +
Sbjct: 310 F-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLI 343


>gi|159462370|ref|XP_001689415.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158283403|gb|EDP09153.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 263

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 150/253 (59%), Gaps = 11/253 (4%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   LL G  D   A L + AGAGG ++ DWA ML RMY RWAE   ++   L+   G+E
Sbjct: 2   ELRRLLCGPYDDRGARLTISAGAGGVDAMDWAEMLERMYMRWAEAGGYQVAVLDRAAGDE 61

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIE 220
           AGI        G +AYG+L+ E+G HRLVR SP+++   R TSF+ + V PV+  DD  E
Sbjct: 62  AGITG------GRHAYGYLRCEKGTHRLVRNSPFNAKGLRQTSFAGVDVMPVLGPDDLPE 115

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++++E D  I T R+ G GGQ+VN  ++ VRI H+PTG+ V+C QERSQ +NKA A ++L
Sbjct: 116 LDLNEKDLEITTMRSGGKGGQNVNKVETGVRILHVPTGLAVKCTQERSQAQNKAIALDLL 175

Query: 281 RAKLY--ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +A+L     E    E  + +G  +        +++  +  PY++VKD RT  E +    V
Sbjct: 176 KARLLANSREPPMEEAGSRMGAVADCNT-HAHRVQGCLFHPYKLVKDTRTGTETSDVQAV 234

Query: 339 LDGDLDDFMKATL 351
           +DG+L  FM A L
Sbjct: 235 MDGELGGFMAAVL 247


>gi|319637760|ref|ZP_07992526.1| peptide chain release factor 1 [Neisseria mucosa C102]
 gi|317400915|gb|EFV81570.1| peptide chain release factor 1 [Neisseria mucosa C102]
          Length = 358

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
 gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
          Length = 360

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/286 (41%), Positives = 173/286 (60%), Gaps = 18/286 (6%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           + E+A+EE     ++E  D L  I LE + ++   LL  +  D  + +LE+ AG GG E+
Sbjct: 76  MREMAVEE-----VREAKDKL--IALEGDLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G N YG LK E G HR+
Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+
Sbjct: 187 QRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309
           RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q+    AN I    K  +G G
Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y     + V D R N+   S  ++L G +D  ++  LA
Sbjct: 304 DRSERIRTYNFAQGR-VTDHRVNLTLYSLDEILAGGVDAVIEPLLA 348


>gi|319406093|emb|CBI79723.1| peptide chain release factor 1 [Bartonella sp. AR 15-3]
          Length = 359

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD     +E+ AG GG+E+  +A  L RMY R+A    +K E + + DGE  G K     
Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ RI   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEICPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +    S KT++G G    +IR+Y   P   V D R N+       +++GDL++ + 
Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINMTLYKLDRIMEGDLNELIN 341

Query: 349 ATLA 352
           A ++
Sbjct: 342 ALIS 345


>gi|306844842|ref|ZP_07477425.1| peptide chain release factor 1 [Brucella sp. BO1]
 gi|306274774|gb|EFM56555.1| peptide chain release factor 1 [Brucella sp. BO1]
          Length = 359

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARKEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVDALIS 345


>gi|227328865|ref|ZP_03832889.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 360

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   DGE  G K     I
Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEVVSASDGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 VV 345


>gi|256384120|gb|ACU78690.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256384952|gb|ACU79521.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455380|gb|ADH21615.1| peptide chain release factor 1 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 364

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/332 (36%), Positives = 189/332 (56%), Gaps = 19/332 (5%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELALEEDDCSI--- 84
           ED ++ +++ +   L +E+ +L+  +  F+  K+  + + D  ++LE   +++   +   
Sbjct: 24  EDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKVILENEKDQELIELAKI 83

Query: 85  -LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            L E +D ++ ++  +E    E LL  +  D  +  +E+   AGG E+  +A  LLRMY 
Sbjct: 84  ELDENNDKVEHLQQVIE----EMLLPKDPNDDKNVIVEIRGAAGGDEANIFAGDLLRMYK 139

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ R+   ++  R 
Sbjct: 140 LYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQRVPKTEAKGRI 199

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVRITH+PTG+VV 
Sbjct: 200 QTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVRITHLPTGIVVT 258

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
            Q  RSQH NK  A  MLRAK+YE E++K++  A    + K  +G G    +IR+Y   P
Sbjct: 259 SQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTGARSEKIRTYNY-P 315

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              V D R  +       V++G++D+F+ A +
Sbjct: 316 QNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347


>gi|313893571|ref|ZP_07827140.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441842|gb|EFR60265.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 360

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/332 (36%), Positives = 187/332 (56%), Gaps = 12/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81
           L  +  DP +     E + L R+   L   +   +  +  L      +E+    +L+E+ 
Sbjct: 16  LEQRISDPEIIARQDEWRKLTRQHSQLSETVETFRTYKKVLAGLDEAMEVIEDKSLDEEF 75

Query: 82  CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + QE    L+  K E+E K Q   L     D  +  +E+  GAGG E+  +A  L RM
Sbjct: 76  REMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YT++AE + ++ E ++ ++ E  G K     ++G N Y  +K E GVHR+ R+   ++  
Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVVFSVEGENVYSKMKFESGVHRVQRVPATETQG 195

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+PTG+V
Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPTGIV 254

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ +RSQ KNK +A  +LRAKL +   Q  E  A++    K+++G G    +IR+Y  
Sbjct: 255 VACQDQRSQLKNKDKAMRVLRAKLQDQAEQ--EAQASMAADRKSQVGTGDRSERIRTYNY 312

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            P   V D R N+       VL+GDLD+ ++A
Sbjct: 313 -PQGRVTDHRINLTLYKLDAVLNGDLDEIIQA 343


>gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
 gi|259585227|sp|C3KDC6|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
          Length = 360

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  G K     +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q+ 
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQT 285

Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              AN I    K  +G G    +IR+Y     + V D R N+   S  ++L G +D  ++
Sbjct: 286 SAAANAIASERKLLVGSGDRSERIRTYNFAQGR-VTDHRVNLTLYSLDEILAGGVDAVIE 344

Query: 349 ATLA 352
             LA
Sbjct: 345 PLLA 348


>gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103]
 gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103]
 gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
          Length = 360

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D ++EV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERDCFVEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG  K E G HR+ R+   +S  R HTS  ++ V P + ++   EI+ SD +IDT
Sbjct: 167 MGEGAYGRFKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E      + +  +G G    +IR+Y   P   V D R N+      + ++G LD  ++ 
Sbjct: 287 HEAE--ASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|163803585|ref|ZP_02197452.1| peptide chain release factor 1 [Vibrio sp. AND4]
 gi|159172627|gb|EDP57484.1| peptide chain release factor 1 [Vibrio sp. AND4]
          Length = 362

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 182/323 (56%), Gaps = 11/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  + + L +E   L+      +  Q +  D+L   E    EDD  + +   + 
Sbjct: 25  DPDVIGNQDKFRALSKEYSQLEEVTQCFQAYQ-QAQDDLAAAEDMANEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKEAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 RGWRIEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TLAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347
           D R N+     ++V++GDL   +
Sbjct: 321 DHRINLTLYRLNEVMEGDLQSLI 343


>gi|308050535|ref|YP_003914101.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
 gi|307632725|gb|ADN77027.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
          Length = 360

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D   A++E+ AGAGG E+  +A  LLRMY+R+AE++ +  E +   DGE  G K      
Sbjct: 107 DDRSAFVEIRAGAGGDEAAIFAGDLLRMYSRYAEQKGWSVELMSASDGEHGGYKEVIAKF 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E G HR+ R+   +S  R HTS  ++ V P V ++  IEI+ +D ++DT
Sbjct: 167 SGDSVYGELKFESGGHRVQRVPATESQGRIHTSACTVVVMPEVPEAEAIEINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSAVRITH+PTG VV+CQ ERSQHKN+A+A  +L A+L   E +KR
Sbjct: 227 FRASGAGGQHVNKTDSAVRITHLPTGTVVECQDERSQHKNRAKAMAVLSARLQAAEDEKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    + ++ +  G    +IR+Y   P   V D R N+     ++V++G+L   M+ 
Sbjct: 287 K--AEETSTRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTLYRLTEVMEGELSALMQP 343

Query: 350 TL 351
            L
Sbjct: 344 IL 345


>gi|261323819|ref|ZP_05963016.1| peptide chain release factor 1 [Brucella neotomae 5K33]
 gi|261299799|gb|EEY03296.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 372

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     ++A   DD S         ++E  +  +RI 
Sbjct: 48  LASEYSELQDVVGKIRELSDARMEAS---DVAAMRDDASTDAEMRALAVEELPEVEKRIA 104

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 164

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 339

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 340 KLDRVMEGDLDELVDALIS 358


>gi|225019405|ref|ZP_03708597.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
 gi|224947822|gb|EEG29031.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
          Length = 361

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 194/340 (57%), Gaps = 14/340 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-----ILLEL 75
           +R   +N K  DP++  +    + LMRE +HL   I   +E +    DNL     +L E 
Sbjct: 13  KRFDEINEKLMDPNVVNDQHAYRDLMRELKHLTPIIDKYREYK-AAKDNLEEAKEMLSEG 71

Query: 76  ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            L+++   ++QE  S++ Q I+   E  +   L +   D  D  +E+  GAGG E+  +A
Sbjct: 72  GLDKEFKEMVQEQYSESQQAIEDLGEELKILLLPTDPNDDKDVIIEIRGGAGGEEAALFA 131

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT +AE + +KTE L  ++ E  G K  +  + G  AY  LK E GVHR+ R+ 
Sbjct: 132 YNLYRMYTMYAEAKGWKTEILSANETELGGFKEVSFEVSGEGAYSRLKFESGVHRVQRVP 191

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +++ R HTS  ++ V P  ++ +E +I+ +D ++DT+RASGAGGQHVN T+SA+R+T+
Sbjct: 192 ETEASGRIHTSTVTVAVLPEAEE-VEFDINPTDIQVDTFRASGAGGQHVNKTESAIRLTY 250

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNK +A  +LR +LYE  +  +E    I    K ++G G    +
Sbjct: 251 LPTGLVVECQDERSQHKNKDKAMKILRTRLYEQAM--KEATDKIASERKAQVGTGDRSER 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   + D R  +        ++GD+D+ + A +
Sbjct: 309 IRTYNY-PQGRITDHRIGLTLYHLEQNMNGDIDEIIDALI 347


>gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
          Length = 375

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/272 (41%), Positives = 166/272 (61%), Gaps = 10/272 (3%)

Query: 88  TSDNLQRIKLEVEYKQFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTR 143
            ++ ++  K+++E   FE    LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R
Sbjct: 95  AAEEIEATKIKIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSR 154

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE+ +++TE +   + +  G K   + + G  AY  LK E G HR+ R+   +S  R H
Sbjct: 155 FAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHRVQRVPATESQGRIH 214

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ V P  D+  EI+++ +D RIDT+RASGAGGQH+N TDSA+RITH+PTG+VV+C
Sbjct: 215 TSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSAIRITHLPTGMVVEC 274

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q  RSQH NKAQA  +L A+L   + QKRE  A      K+ IG G    +IR+Y   P 
Sbjct: 275 QDGRSQHANKAQAMKVLAARLN--DKQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQ 331

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             V D R N+       V+DGD+++   A +A
Sbjct: 332 GRVTDHRINLTLHKLDFVMDGDMEEITSALIA 363


>gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254790905|sp|B8GLA1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 361

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 151/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D ++ +LE+ AG GG E+  +A  L RMY+R+AE + ++ E L   +GE  G K     +
Sbjct: 109 DHSNLFLEIRAGTGGDEAAIFAGDLFRMYSRYAENQGWQVEILSQSEGEHGGYKEVIARL 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ V P  D+    EI+ +D R+DT
Sbjct: 169 IGAGAYSRLKFESGAHRVQRVPATESQGRIHTSAATVAVMPEPDEVEAPEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSA+R+TH+PTG+VV+CQ ERSQHKN+A+A ++L AKL+E E Q R
Sbjct: 229 YRASGAGGQHVNKTDSAIRLTHLPTGIVVECQDERSQHKNRARAMSLLAAKLFEAE-QAR 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++ A    + K+ +G G    +IR+Y   P   + D R N+       V+ GDLD  ++ 
Sbjct: 288 QQ-AEQSATRKSLVGSGDRSERIRTYNF-PQGRITDHRINLTLYKLDAVMAGDLDPVIEP 345

Query: 350 TL 351
            +
Sbjct: 346 LI 347


>gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|119361519|sp|Q3A928|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 358

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/327 (37%), Positives = 187/327 (57%), Gaps = 17/327 (5%)

Query: 32  DPHLWQNVIEAKMLMRE-RQHLDNAISFIKEIQD--RLCDNLILLELALEEDDCSILQET 88
           D   WQ  ++A   + E  Q        +KEI+D  R+ D        L+ D   ++Q  
Sbjct: 27  DTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIEDAERMLDE------KLDPDFRELVQSE 80

Query: 89  SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             +L+  + E+E K    LL  +  D  +  +E+ AGAGG E+  +A  L RMY+++A++
Sbjct: 81  LHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAGDLFRMYSKYADR 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             +K E ++ H  +  G K     I+G   Y  +K E GVHR+ R+   +S  R HTS +
Sbjct: 141 MGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGVHRVQRVPTTESGGRIHTSTA 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P  ++ +E+EI+ +D RID + ASGAGGQHVN T+SAVRITHIPTG+VV CQ E+
Sbjct: 201 TVAVLPEAEE-VEVEINPNDLRIDVFCASGAGGQHVNKTESAVRITHIPTGIVVTCQDEK 259

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNK +A  +LRA+L  L+  ++E+ A +  + K+++G G    +IR+Y   P   V 
Sbjct: 260 SQHKNKERAMKILRARL--LDKARQEQEAELASARKSQVGTGDRSERIRTYNF-PQNRVT 316

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R  +       VL+GDLD+ + A +
Sbjct: 317 DHRIGLTLHRLDAVLEGDLDEIIDALI 343


>gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis
           MB4]
 gi|22096035|sp|Q8RD98|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis
           MB4]
          Length = 356

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 189/332 (56%), Gaps = 10/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP++  NV E +  ++E   +++ +   +E +  L +     EL   +D+    
Sbjct: 15  LSQKISDPNVISNVEEWRKYVKEHAAIEDIVLKYREYKKVLEEIKATEELLSSQDEELKE 74

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142
               +  Q  + + +  +   +L    D ND     +E+ AGAGG E+  +A  L RMYT
Sbjct: 75  MAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAYDLFRMYT 134

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +AEK+ +K E +  +  +  G K     I G  AY  LK E GVHR+ RI   ++  R 
Sbjct: 135 MYAEKKGWKVEIMSANKTDIGGFKEVIFSISGKGAYSRLKYESGVHRVQRIPTTEAGGRI 194

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS +++ V P  ++ +++EI+ +D +ID +R+SG GGQ VNTTDSAVR+THIPTG+VV 
Sbjct: 195 HTSTATVAVLPEAEE-VDVEINPNDIKIDVFRSSGHGGQSVNTTDSAVRVTHIPTGIVVT 253

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
           CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I E+ K+++G G    +IR+Y   P
Sbjct: 254 CQDERSQIQNRERALKILRAKLYEMAL--KEQQREIAEARKSQVGTGERSERIRTYNF-P 310

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              V D R  +      +VLDG+LD+ + A +
Sbjct: 311 QGRVTDHRIGLTLYKLQEVLDGELDEIIDALI 342


>gi|298497806|ref|ZP_07007613.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
 gi|297542139|gb|EFH78189.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
          Length = 362

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 191/346 (55%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   ++ V+R   +     DP +  +  + + L +E   L+      +  Q +  ++L+ 
Sbjct: 6   LSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128
            E   +EDD  + +   D ++  K  +E    E  +L    D ND    +LE+ AGAGG 
Sbjct: 65  AEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGS 302

Query: 308 --WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                +IR+Y   P   V D R  +     ++V++GD+   +   +
Sbjct: 303 RDRSDRIRTYNY-PQGRVSDHRIILTVYRLTEVMEGDMQSLIDPVI 347


>gi|240849863|ref|YP_002971251.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
 gi|240266986|gb|ACS50574.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
          Length = 358

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/274 (41%), Positives = 165/274 (60%), Gaps = 17/274 (6%)

Query: 91  NLQRIKLEVEYK---QFES------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
           NL + +L + YK   QFE       L    AD  +A +E+ AG GG+E+  ++  L RMY
Sbjct: 77  NLAQEELPLLYKKVEQFEKELQILLLPKDVADEKNAIVEIRAGTGGSEAALFSGDLFRMY 136

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+A    +K E + + +GE  G K     I G   +  LK E GVHR+ RI   ++  R
Sbjct: 137 ERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHRVQRIPETETGGR 196

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P  ++ I+I+I   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V
Sbjct: 197 IHTSAATVAVLPEAEE-IDIDIRPEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV 255

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
             Q E+SQH+N+A+A  +LRA+L+++E QK E  +    S K+++G G    +IR+Y   
Sbjct: 256 -VQAEKSQHQNRARALQILRARLFDIERQKAE--SERSASRKSQVGSGDRSERIRTYNF- 311

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           P   V D R N+       +L+GDLD+ + A ++
Sbjct: 312 PQGRVTDHRINLTLYKLDRILEGDLDELLHALIS 345


>gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75]
 gi|254790880|sp|B7UQ99|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75]
          Length = 360

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/272 (41%), Positives = 162/272 (59%), Gaps = 10/272 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   D L+  K + E   +Q   LL      D  +A+LEV AG GG E+  +A 
Sbjct: 70  DDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+  
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312
           PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G +    
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRN 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           R+Y   P   V D R N+      +V++G LD
Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|314935933|ref|ZP_07843283.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655939|gb|EFS19681.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 358

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 192/346 (55%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60

Query: 72  LLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           + E+  E DD     +L+E +  L+    E+E +Q + LL      D  D  +E+ A AG
Sbjct: 61  IDEMLTETDDKEEIEMLKEEASGLKGELPELE-EQLKFLLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LLRMYT++AE + FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIE+   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEVRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG++     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHIPTGIIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    ++R+Y   P   V D R  +       +++G LD+ + A
Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340


>gi|163759877|ref|ZP_02166961.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
 gi|162282835|gb|EDQ33122.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
          Length = 361

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 24/306 (7%)

Query: 66  LCDNLILLELALEE--DDCSILQETSDNLQ------------RIKLEVEYKQFESLL--S 109
           L D +  L+ AL E  D  ++LQ+T+++ +            ++++    +Q E +L   
Sbjct: 45  LVDQIRALDAALAERSDLEAMLQDTANDKEMRDLAESELRSTKVRIGELEEQIEIMLLPK 104

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
             AD   A LE+ AG GG+E+  +A  L RMY R+A  RK+K E L   +GE  G K   
Sbjct: 105 DAADERSAILEIRAGTGGSEAALFAGDLFRMYERYASSRKWKVEVLSASEGEAGGYKEII 164

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D I+IE+   D R
Sbjct: 165 ATISGKGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-IDIEVRSEDIR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A+A  +LRA+LY++E 
Sbjct: 224 IDTMRASGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHQNRARAMQVLRARLYDMER 282

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           Q+ ++     +S ++++G G    +IR+Y   P   V D R N+       ++ G++D+ 
Sbjct: 283 QRADD--ERSQSRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEV 339

Query: 347 MKATLA 352
           + A ++
Sbjct: 340 VDALIS 345


>gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 360

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 183/315 (58%), Gaps = 24/315 (7%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L++ +  L+ A + +K+       +  + E+A+EE     ++E  D L    +E+E  
Sbjct: 53  KQLLKVQGDLEGAQALLKD------SDPDMREMAVEE-----VREAKDQL----VELESS 97

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
               LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE
Sbjct: 98  LQRMLLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G N YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   I
Sbjct: 158 HGGYKEVIARVEGDNVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAI 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A   L 
Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMAWLS 277

Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           AKL +   Q+    AN I    K  +G G    +IR+Y     + V D R N+   S  +
Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNFAQGR-VTDHRVNLTLYSLDE 333

Query: 338 VLDGDLDDFMKATLA 352
           +L G +D  ++  LA
Sbjct: 334 ILAGGVDAVIEPLLA 348


>gi|145639103|ref|ZP_01794711.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|145272075|gb|EDK11984.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|309751054|gb|ADO81038.1| Peptide chain release factor 1 [Haemophilus influenzae R2866]
          Length = 361

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   +L+
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|240147055|ref|ZP_04745656.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|257200778|gb|EEU99062.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|291535754|emb|CBL08866.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis M50/1]
          Length = 357

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 200/348 (57%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  ++ + R   L ++  +P +  + +  + LM+E+  L    NA    K+ +  + D
Sbjct: 1   MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L LLE   +E+   +  +E +D+  R++   +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +KTE +E  +    G+KS T ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  ++ ++++I + D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVQIDDKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KLY+LE QK  +     E  K+++G
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAE--AELRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+       +++GD+ + + A +A
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIA 344


>gi|269926759|ref|YP_003323382.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790419|gb|ACZ42560.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 355

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/350 (36%), Positives = 192/350 (54%), Gaps = 30/350 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN  +R   L+    DP ++ +      + RER  L++ +S  +E +         ++L
Sbjct: 5   LDNIEKRFDELDRMMSDPEIFSDPSRLMEVARERSELEDIVSLYREYKK--------VKL 56

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE------------SLLSGEA-DSNDAYLEVH 122
             EED    L E  D   R   E EY+Q              +LL  +  D  D  +E+ 
Sbjct: 57  TREED--RRLMEDPDPDIRQMAEEEYEQLADREKDLEERLKIALLPKDPNDEKDVIVEIR 114

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GG E+  +A  L RMYTR+AE++ +KTE L   + +  G K     +KG  AY  LK
Sbjct: 115 AGTGGEEAALFAADLYRMYTRYAERQGWKTEVLSTSESDAGGFKEIIFEVKGRGAYSRLK 174

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS +++ V P  ++ +E+EI   D RID +R++G GGQ 
Sbjct: 175 YESGVHRVQRVPVTESQGRIHTSTATVAVLPEAEE-VEVEIDPEDLRIDVFRSTGHGGQS 233

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ KN+A+A  +LRA+LYE+E +K      +G+  
Sbjct: 234 VNTTDSAVRITHLPTGLVVTCQDEKSQLKNRAKAMAVLRARLYEMERRK--REEELGQVR 291

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++ +G G    +IR+Y   P   V D R     ++   +LDG++D  +++
Sbjct: 292 RSMVGTGERSEKIRTYNF-PQDRVTDHRIKESFSNLPAILDGEIDRIIES 340


>gi|256059849|ref|ZP_05450036.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 359

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     ++A   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARMEAS---DVAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++GDLD+ + A ++
Sbjct: 327 KLDRVMEGDLDELVDALIS 345


>gi|209965909|ref|YP_002298824.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
 gi|209959375|gb|ACJ00012.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
          Length = 360

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 189/331 (57%), Gaps = 18/331 (5%)

Query: 34  HLWQNVIEAKMLMRERQH---LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
            L    +  ++ +R  Q    L+   + I E++    D   L  +A E DD  +     D
Sbjct: 25  QLASGTLSGEVFVRSSQEYAELEPVATAIAELRRARADMADLQAMA-EGDDAEMATLARD 83

Query: 91  NL----QRIKLEVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            L    +RI  E+E +   +LL   EAD  +A LEV AG GG E+  +A  L  MY R+A
Sbjct: 84  ELVEADRRIP-ELERRIMLALLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYA 142

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + ++ E +E+++    G K A+  I G N +  LK E GVHR+ R+   ++  R HTS
Sbjct: 143 GIQGWRFETIEVNETGLGGYKEASASITGRNVFRRLKFESGVHRVQRVPETEAGGRIHTS 202

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            +++ V P  ++ ++I I E D RID +R+ G+GGQ VNTTDSAVRITH+PT +VVQCQ 
Sbjct: 203 AATVAVLPEAEE-VDIHIEEKDLRIDVFRSQGSGGQSVNTTDSAVRITHLPTNIVVQCQD 261

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           E+SQHKNKA+A  +LRA+LYE+E Q+R+  +    S +T++G G    +IR+Y   P   
Sbjct: 262 EKSQHKNKAKALKVLRARLYEIERQRRD--SERAASRRTQVGSGDRSERIRTYNF-PQGR 318

Query: 323 VKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           V D R N+       V+ G+ LD+ + A +A
Sbjct: 319 VTDHRINLTLYKIDKVMAGEALDELVDALVA 349


>gi|320174901|gb|EFW50020.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112]
          Length = 360

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGCLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB]
 gi|166977370|sp|A0LIZ8|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 355

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/346 (36%), Positives = 189/346 (54%), Gaps = 18/346 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  ++  Q+   L     +P L  N  E + + RE   +     A    K +  +L D
Sbjct: 1   MFDRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAG 124
           N  LLE   +E D  + +     +  +K ++E  +    L+    D ND     LE+ AG
Sbjct: 61  NQQLLE---QETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  + + L RMYTR+AE R++K E L+ H     G+K     + G  AY  LK E
Sbjct: 118 TGGEEAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHR+ R+   +S  R HTS  ++ V P  ++ +++ I  +D R+D +R+SG GGQ VN
Sbjct: 178 RGVHRVQRVPVTESQGRIHTSAVTVAVLPEAEE-VDVYIDPNDLRVDVFRSSGPGGQSVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+THIP+G+VV CQ E+SQHKNKA+A  +LRA+L  L+  + E+ A I    K+
Sbjct: 237 TTDSAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARL--LDQMQSEQEARIARDRKS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++G G    +IR+Y   P   V D R N+       +L G LD+ +
Sbjct: 295 QVGTGDRSERIRTYNF-PQNRVSDHRINLTLYKLDIILGGALDEII 339


>gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
 gi|254790883|sp|B8F526|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
          Length = 360

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 171/279 (61%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAY---LEVHAGAGGTESQDWAN 135
           DD  + +  ++ ++  K E+E  +Q   +L    D ND Y   LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +     ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQ--EQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|269123393|ref|YP_003305970.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
 gi|268314719|gb|ACZ01093.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
          Length = 358

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 155/244 (63%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  + + + RM+TR+AE+ K+KTE ++ ++    G+K  T LI
Sbjct: 106 DEKNVIVELRAGAGGDEAALFVSDIFRMFTRYAERNKWKTEIIDKNEIGVGGLKEITFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +++ R HTS  ++ V P +DD  ++ I+ SD +IDT
Sbjct: 166 SGKGAYSRLKFESGVHRVQRVPDTEASGRIHTSTITVAVLPEIDDVEQVAINPSDLQIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITH PTG+VV  Q  RSQ KNK  A  +L +KLYE+E++K+
Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHKPTGIVVTSQDGRSQIKNKEAAMKVLASKLYEIEVEKQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +++    ++++G G    +IR+Y   P   V D R  +       +LDG LD+ + A
Sbjct: 286 R--SSVEAERRSQVGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHRLDAILDGALDEIIDA 342

Query: 350 TLAI 353
            +A 
Sbjct: 343 LIAF 346


>gi|225075789|ref|ZP_03718988.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
 gi|224952871|gb|EEG34080.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
          Length = 358

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   + D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
 gi|238687578|sp|B0K1F7|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
          Length = 356

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 193/336 (57%), Gaps = 10/336 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL    D+
Sbjct: 11  RYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKELLSSNDE 70

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLL 138
                   +  Q  + + +  +   +L    D ND     +E+ AGAGG E+  +A+ L 
Sbjct: 71  ELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAALFAHDLF 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y  LK E GVHR+ R+   ++
Sbjct: 131 RMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQRVPTTEA 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P V++ +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+THIPTG
Sbjct: 191 GGRIHTSTATVAVLPEVEE-VDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRVTHIPTG 249

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I E+ K+++G G    +IR+Y
Sbjct: 250 IVVTCQDERSQIQNRERALKILRAKLYEMALQEQQR--EIAETRKSQVGTGERSERIRTY 307

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              P   V D R  +      +VLDGDLD+ + A +
Sbjct: 308 NY-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|218689158|ref|YP_002397370.1| peptide chain release factor 1 [Escherichia coli ED1a]
 gi|254790882|sp|B7MTZ5|RF1_ECO81 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218426722|emb|CAR07559.1| peptide chain release factor RF-1 [Escherichia coli ED1a]
          Length = 360

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYCLDEVMEGKLD 338


>gi|323187441|gb|EFZ72750.1| peptide chain release factor 1 [Escherichia coli RN587/1]
          Length = 360

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 358

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           +++   A +A
Sbjct: 337 MEEITNALIA 346


>gi|291538249|emb|CBL11360.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis XB6B4]
          Length = 358

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 200/348 (57%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  ++ + R   L ++  +P +  + +  + LM+E+  L    NA    K+ +  + D
Sbjct: 1   MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L LLE   +E+   +  +E +D+  R++   +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +KTE +E  +    G+KS T ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  ++ ++++I + D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVQIDDKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KLY+LE QK  +     E  K+++G
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAE--AELRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+       +++GD+ + + A +A
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIA 344


>gi|325128768|gb|EGC51631.1| peptide chain release factor 1 [Neisseria meningitidis N1568]
          Length = 358

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|261867616|ref|YP_003255538.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412948|gb|ACX82319.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 360

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 105/243 (43%), Positives = 155/243 (63%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K    L+
Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L +   Q++
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQ---QEQ 283

Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           E++A    ++ +  +G G    +IR+Y   P   V D R N+      +V++G +DD ++
Sbjct: 284 EKLAQEQADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQ 342

Query: 349 ATL 351
             +
Sbjct: 343 PII 345


>gi|82544335|ref|YP_408282.1| peptide chain release factor 1 [Shigella boydii Sb227]
 gi|187734065|ref|YP_001879994.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|119361607|sp|Q31ZQ4|RF1_SHIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691757|sp|B2TZV9|RF1_SHIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81245746|gb|ABB66454.1| peptide chain release factor RF-1 [Shigella boydii Sb227]
 gi|187431057|gb|ACD10331.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|320185614|gb|EFW60376.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83]
 gi|332094801|gb|EGI99845.1| peptide chain release factor 1 [Shigella boydii 3594-74]
          Length = 360

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|293602161|ref|ZP_06684612.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
 gi|292819431|gb|EFF78461.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
          Length = 356

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 182/337 (54%), Gaps = 11/337 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ ++     P    ++   + L RER  L+  +        R  ++L   +  L + D
Sbjct: 11  RLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFA-RTEEDLATAQEMLSDPD 69

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138
              + E      R+KLE   +    LL    D ND    +LE+ AG GG ES  ++  LL
Sbjct: 70  MKAMAEDEIKTGRVKLE-SLESALQLLLLPRDPNDGRSVFLEIRAGTGGDESALFSGDLL 128

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+AE R ++ E +     E  G K     I G  AYG LK E G HR+ R+   ++
Sbjct: 129 RMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPATEA 188

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V    D+  EI I+ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG
Sbjct: 189 QGRIHTSACTVAVMAEADEMSEIVINANDLRIDTFRASGAGGQHINKTDSAVRITHLPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV+CQ +RSQH+NK +A  +L A+L + E ++R+  +      K+ IG G    +IR+Y
Sbjct: 249 LVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGTGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R N+       +++GDL++   A +A
Sbjct: 307 NF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 342


>gi|256023112|ref|ZP_05436977.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B]
          Length = 360

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|15677534|ref|NP_274690.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|20139351|sp|Q9JY93|RF1_NEIMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7226940|gb|AAF42034.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|325134780|gb|EGC57417.1| peptide chain release factor 1 [Neisseria meningitidis M13399]
 gi|325199720|gb|ADY95175.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325205597|gb|ADZ01050.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196]
          Length = 358

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|302380176|ref|ZP_07268648.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
 gi|302311959|gb|EFK93968.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
          Length = 355

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 194/340 (57%), Gaps = 11/340 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +     E
Sbjct: 4   NLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDKE 63

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTES 130
           L     D  + +   D +  ++ ++E  Q E  +L    D ND    ++E+ AGAGG E+
Sbjct: 64  LLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMY  +++K+ + TE ++I      GIK   +++KG  AY  LK E GVHR+
Sbjct: 124 GLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P  +D ++++I + D RID +RASG GGQ VNTTDSAV
Sbjct: 184 QRVPQTESSGRIHTSTATVAVLPEAED-VDVKIEQKDLRIDVFRASGNGGQCVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV CQ E+SQ KNK +A  +L+++L+  +L + E+  +  ++ K+++G G 
Sbjct: 243 RITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLF--DLMEEEKNKDRADARKSQVGTGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +IR+Y   P   + D R N       + LDGD+++ +
Sbjct: 301 RSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMI 339


>gi|327253901|gb|EGE65530.1| peptide chain release factor 1 [Escherichia coli STEC_7v]
          Length = 360

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
          Length = 371

 Score =  195 bits (495), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/289 (40%), Positives = 168/289 (58%), Gaps = 18/289 (6%)

Query: 66  LCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           L D+  + E A +E D +   LQ   ++LQ + L  +     +LL          LE+ A
Sbjct: 79  LLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLL----------LEIRA 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG ES  +A  LLRMYTR+AE+R+++ E +     +  G K   + I G  A+  LK 
Sbjct: 129 GTGGEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKF 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ V P  D+  E+EI+ SD R+DT+RASGAGGQHV
Sbjct: 189 ESGGHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHV 248

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A++ +++L  R   A    + +
Sbjct: 249 NKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRR 306

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             IG G    +IR+Y   P   V D R N+       ++DGDLD+ + A
Sbjct: 307 NLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISA 354


>gi|15830970|ref|NP_309743.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|16129174|ref|NP_415729.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24112610|ref|NP_707120.1| peptide chain release factor 1 [Shigella flexneri 2a str. 301]
 gi|26247534|ref|NP_753574.1| peptide chain release factor 1 [Escherichia coli CFT073]
 gi|30062735|ref|NP_836906.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|74312449|ref|YP_310868.1| peptide chain release factor 1 [Shigella sonnei Ss046]
 gi|82776551|ref|YP_402900.1| peptide chain release factor 1 [Shigella dysenteriae Sd197]
 gi|89108056|ref|AP_001836.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. W3110]
 gi|91210432|ref|YP_540418.1| peptide chain release factor 1 [Escherichia coli UTI89]
 gi|110641441|ref|YP_669171.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110805216|ref|YP_688736.1| peptide chain release factor 1 [Shigella flexneri 5 str. 8401]
 gi|117623429|ref|YP_852342.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157158410|ref|YP_001462464.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|157160716|ref|YP_001458034.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|168750771|ref|ZP_02775793.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758136|ref|ZP_02783143.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764382|ref|ZP_02789389.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771100|ref|ZP_02796107.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776896|ref|ZP_02801903.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|168782567|ref|ZP_02807574.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|168787715|ref|ZP_02812722.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|168801524|ref|ZP_02826531.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|170020422|ref|YP_001725376.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|170080839|ref|YP_001730159.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682630|ref|YP_001743983.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|188494282|ref|ZP_03001552.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|191170894|ref|ZP_03032445.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|193064852|ref|ZP_03045929.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|193069953|ref|ZP_03050901.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194426002|ref|ZP_03058558.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194434263|ref|ZP_03066529.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194437123|ref|ZP_03069222.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|195939099|ref|ZP_03084481.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807446|ref|ZP_03249783.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816069|ref|ZP_03257248.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822717|ref|ZP_03263036.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398404|ref|YP_002270145.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209918452|ref|YP_002292536.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217328218|ref|ZP_03444300.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218549098|ref|YP_002382889.1| peptide chain release factor 1 [Escherichia fergusonii ATCC 35469]
 gi|218553765|ref|YP_002386678.1| peptide chain release factor 1 [Escherichia coli IAI1]
 gi|218558140|ref|YP_002391053.1| peptide chain release factor 1 [Escherichia coli S88]
 gi|218694725|ref|YP_002402392.1| peptide chain release factor 1 [Escherichia coli 55989]
 gi|218699918|ref|YP_002407547.1| peptide chain release factor 1 [Escherichia coli IAI39]
 gi|218704733|ref|YP_002412252.1| peptide chain release factor 1 [Escherichia coli UMN026]
 gi|227886367|ref|ZP_04004172.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|237705173|ref|ZP_04535654.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|238900442|ref|YP_002926238.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|253773790|ref|YP_003036621.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161293|ref|YP_003044401.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|254792681|ref|YP_003077518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018539|ref|ZP_05432404.1| peptide chain release factor 1 [Shigella sp. D9]
 gi|260843503|ref|YP_003221281.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|260854872|ref|YP_003228763.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|260867616|ref|YP_003234018.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|261224943|ref|ZP_05939224.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257200|ref|ZP_05949733.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291282236|ref|YP_003499054.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404754|ref|ZP_06648746.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|293409598|ref|ZP_06653174.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|293414488|ref|ZP_06657137.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|293433527|ref|ZP_06661955.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|298380397|ref|ZP_06989996.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300816902|ref|ZP_07097122.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300821019|ref|ZP_07101168.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300896599|ref|ZP_07115118.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300906882|ref|ZP_07124556.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300921823|ref|ZP_07137980.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300928243|ref|ZP_07143780.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300939553|ref|ZP_07154210.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300951678|ref|ZP_07165502.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300955611|ref|ZP_07167968.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300971920|ref|ZP_07171708.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300995966|ref|ZP_07181328.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|301017243|ref|ZP_07182024.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|301046860|ref|ZP_07193977.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|301305581|ref|ZP_07211672.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|301327073|ref|ZP_07220355.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301648136|ref|ZP_07247889.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|306813891|ref|ZP_07448064.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|307137826|ref|ZP_07497182.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|307310034|ref|ZP_07589684.1| peptide chain release factor 1 [Escherichia coli W]
 gi|309789161|ref|ZP_07683754.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309794302|ref|ZP_07688726.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|312971398|ref|ZP_07785573.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|331641741|ref|ZP_08342876.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331646529|ref|ZP_08347632.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331662614|ref|ZP_08363537.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331667595|ref|ZP_08368459.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331676991|ref|ZP_08377687.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331682700|ref|ZP_08383319.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332279599|ref|ZP_08392012.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|67471891|sp|P0A7I0|RF1_ECOLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471892|sp|P0A7I1|RF1_ECOL6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471893|sp|P0A7I2|RF1_ECO57 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471894|sp|P0A7I3|RF1_SHIFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361536|sp|Q0TIF9|RF1_ECOL5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361537|sp|Q1RCM7|RF1_ECOUT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361608|sp|Q32GZ6|RF1_SHIDS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361609|sp|Q3Z0S9|RF1_SHISS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122957490|sp|Q0T5I4|RF1_SHIF8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223555|sp|A1AAD8|RF1_ECOK1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977361|sp|A7ZKY5|RF1_ECO24 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977362|sp|A7ZZE7|RF1_ECOHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039971|sp|B1IU82|RF1_ECOLC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739104|sp|B7MKB3|RF1_ECO45 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739105|sp|B7NUX7|RF1_ECO7I RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739106|sp|B7LXC6|RF1_ECO8A RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739107|sp|B7N422|RF1_ECOLU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739108|sp|B1LH89|RF1_ECOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739109|sp|B7LSH9|RF1_ESCF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576656|sp|B1XAQ2|RF1_ECODH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058712|sp|B5YXM9|RF1_ECO5E RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058713|sp|B6I9S6|RF1_ECOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790881|sp|B7LGX2|RF1_ECO55 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585238|sp|C4ZTQ2|RF1_ECOBW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26107935|gb|AAN80134.1|AE016759_408 Peptide chain release factor 1 [Escherichia coli CFT073]
 gi|1651601|dbj|BAA36069.1| peptide chain release factor RF-1 [Escherichia coli str. K12
           substr. W3110]
 gi|1787462|gb|AAC74295.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13361181|dbj|BAB35139.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24051515|gb|AAN42827.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 301]
 gi|30040983|gb|AAP16713.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 2457T]
 gi|73855926|gb|AAZ88633.1| peptide chain release factor RF-1 [Shigella sonnei Ss046]
 gi|81240699|gb|ABB61409.1| peptide chain release factor RF-1 [Shigella dysenteriae Sd197]
 gi|91072006|gb|ABE06887.1| peptide chain release factor RF-1 [Escherichia coli UTI89]
 gi|110343033|gb|ABG69270.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110614764|gb|ABF03431.1| peptide chain release factor RF-1 [Shigella flexneri 5 str. 8401]
 gi|115512553|gb|ABJ00628.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157066396|gb|ABV05651.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|157080440|gb|ABV20148.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|169755350|gb|ACA78049.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|169888674|gb|ACB02381.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520348|gb|ACB18526.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|187767792|gb|EDU31636.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015105|gb|EDU53227.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|188489481|gb|EDU64584.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|188999995|gb|EDU68981.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354981|gb|EDU73400.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|189360046|gb|EDU78465.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365613|gb|EDU84029.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|189372547|gb|EDU90963.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|189376326|gb|EDU94742.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|190908626|gb|EDV68214.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|192927537|gb|EDV82154.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|192956706|gb|EDV87161.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194416057|gb|EDX32323.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194417494|gb|EDX33597.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194424106|gb|EDX40094.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|208727247|gb|EDZ76848.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732717|gb|EDZ81405.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738202|gb|EDZ85885.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159804|gb|ACI37237.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209772528|gb|ACI84576.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772530|gb|ACI84577.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772532|gb|ACI84578.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772534|gb|ACI84579.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772536|gb|ACI84580.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209911711|dbj|BAG76785.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217318645|gb|EEC27071.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218351457|emb|CAU97165.1| peptide chain release factor RF-1 [Escherichia coli 55989]
 gi|218356639|emb|CAQ89265.1| peptide chain release factor RF-1 [Escherichia fergusonii ATCC
           35469]
 gi|218360533|emb|CAQ98091.1| peptide chain release factor RF-1 [Escherichia coli IAI1]
 gi|218364909|emb|CAR02605.1| peptide chain release factor RF-1 [Escherichia coli S88]
 gi|218369904|emb|CAR17679.1| peptide chain release factor RF-1 [Escherichia coli IAI39]
 gi|218431830|emb|CAR12715.1| peptide chain release factor RF-1 [Escherichia coli UMN026]
 gi|222033010|emb|CAP75750.1| Peptide chain release factor 1 [Escherichia coli LF82]
 gi|226899930|gb|EEH86189.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|227836571|gb|EEJ47037.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|238861984|gb|ACR63982.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|242376990|emb|CAQ31713.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)]
 gi|253324834|gb|ACT29436.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973194|gb|ACT38865.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|253977408|gb|ACT43078.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)]
 gi|254592081|gb|ACT71442.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257753521|dbj|BAI25023.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|257758650|dbj|BAI30147.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|257763972|dbj|BAI35467.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|260449654|gb|ACX40076.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|281178397|dbj|BAI54727.1| peptide chain release factor 1 [Escherichia coli SE15]
 gi|281600635|gb|ADA73619.1| Peptide chain release factor 1 [Shigella flexneri 2002017]
 gi|284921023|emb|CBG34088.1| peptide chain release factor 1 [Escherichia coli 042]
 gi|290762109|gb|ADD56070.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324346|gb|EFE63768.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|291426962|gb|EFE99988.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|291434546|gb|EFF07519.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|291470066|gb|EFF12550.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|294493866|gb|ADE92622.1| peptide chain release factor 1 [Escherichia coli IHE3034]
 gi|298277839|gb|EFI19353.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300301228|gb|EFJ57613.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|300304663|gb|EFJ59183.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|300317504|gb|EFJ67288.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300359542|gb|EFJ75412.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300400374|gb|EFJ83912.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|300401315|gb|EFJ84853.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300411045|gb|EFJ94583.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300421749|gb|EFK05060.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300449124|gb|EFK12744.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300455557|gb|EFK19050.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300463712|gb|EFK27205.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300526318|gb|EFK47387.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300530676|gb|EFK51738.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300839170|gb|EFK66930.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|300846326|gb|EFK74086.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301073722|gb|EFK88528.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|305852528|gb|EFM52976.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|306909752|gb|EFN40246.1| peptide chain release factor 1 [Escherichia coli W]
 gi|307553266|gb|ADN46041.1| peptide chain release factor 1 [Escherichia coli ABU 83972]
 gi|307627266|gb|ADN71570.1| peptide chain release factor 1 [Escherichia coli UM146]
 gi|308122207|gb|EFO59469.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|308922915|gb|EFP68429.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309701510|emb|CBJ00817.1| peptide chain release factor 1 [Escherichia coli ETEC H10407]
 gi|310335995|gb|EFQ01195.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|312945841|gb|ADR26668.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313649400|gb|EFS13831.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|315060462|gb|ADT74789.1| peptide chain release factor RF-1 [Escherichia coli W]
 gi|315135847|dbj|BAJ43006.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|315288568|gb|EFU47966.1| peptide chain release factor 1 [Escherichia coli MS 110-3]
 gi|315290789|gb|EFU50161.1| peptide chain release factor 1 [Escherichia coli MS 153-1]
 gi|315297345|gb|EFU56625.1| peptide chain release factor 1 [Escherichia coli MS 16-3]
 gi|315615947|gb|EFU96573.1| peptide chain release factor 1 [Escherichia coli 3431]
 gi|320181782|gb|EFW56692.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905]
 gi|320188003|gb|EFW62670.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195779|gb|EFW70404.1| Peptide chain release factor 1 [Escherichia coli WV_060327]
 gi|320199250|gb|EFW73841.1| Peptide chain release factor 1 [Escherichia coli EC4100B]
 gi|320637363|gb|EFX07170.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           G5101]
 gi|320643225|gb|EFX12426.1| peptide chain release factor 1 [Escherichia coli O157:H- str.
           493-89]
 gi|320648162|gb|EFX16838.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H
           2687]
 gi|320653996|gb|EFX22070.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659475|gb|EFX27044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664612|gb|EFX31763.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153190|gb|EFZ39452.1| peptide chain release factor 1 [Escherichia coli EPECa14]
 gi|323162264|gb|EFZ48122.1| peptide chain release factor 1 [Escherichia coli E128010]
 gi|323168381|gb|EFZ54062.1| peptide chain release factor 1 [Shigella sonnei 53G]
 gi|323179274|gb|EFZ64844.1| peptide chain release factor 1 [Escherichia coli 1180]
 gi|323185627|gb|EFZ70988.1| peptide chain release factor 1 [Escherichia coli 1357]
 gi|323378974|gb|ADX51242.1| peptide chain release factor 1 [Escherichia coli KO11]
 gi|323937932|gb|EGB34196.1| peptide chain release 1 [Escherichia coli E1520]
 gi|323942490|gb|EGB38658.1| peptide chain release [Escherichia coli E482]
 gi|323947506|gb|EGB43510.1| peptide chain release 1 [Escherichia coli H120]
 gi|323949672|gb|EGB45558.1| peptide chain release [Escherichia coli H252]
 gi|323953934|gb|EGB49733.1| peptide chain release [Escherichia coli H263]
 gi|323962789|gb|EGB58367.1| peptide chain release [Escherichia coli H489]
 gi|323973391|gb|EGB68578.1| peptide chain release [Escherichia coli TA007]
 gi|323977218|gb|EGB72305.1| peptide chain release [Escherichia coli TW10509]
 gi|324006000|gb|EGB75219.1| peptide chain release factor 1 [Escherichia coli MS 57-2]
 gi|324015639|gb|EGB84858.1| peptide chain release factor 1 [Escherichia coli MS 60-1]
 gi|324017539|gb|EGB86758.1| peptide chain release factor 1 [Escherichia coli MS 117-3]
 gi|324117241|gb|EGC11148.1| peptide chain release [Escherichia coli E1167]
 gi|325497513|gb|EGC95372.1| peptide chain release factor 1 [Escherichia fergusonii ECD227]
 gi|326342759|gb|EGD66529.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044]
 gi|326346388|gb|EGD70125.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125]
 gi|330911076|gb|EGH39586.1| peptide chain release factor 1 [Escherichia coli AA86]
 gi|331038539|gb|EGI10759.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331045281|gb|EGI17408.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331061036|gb|EGI33000.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331065180|gb|EGI37075.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331075680|gb|EGI46978.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331080331|gb|EGI51510.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332092251|gb|EGI97328.1| peptide chain release factor 1 [Shigella boydii 5216-82]
 gi|332098194|gb|EGJ03167.1| peptide chain release factor 1 [Shigella dysenteriae 155-74]
 gi|332101951|gb|EGJ05297.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|332757864|gb|EGJ88191.1| peptide chain release factor 1 [Shigella flexneri 4343-70]
 gi|332759429|gb|EGJ89737.1| peptide chain release factor 1 [Shigella flexneri 2747-71]
 gi|332760305|gb|EGJ90595.1| peptide chain release factor 1 [Shigella flexneri K-671]
 gi|332767445|gb|EGJ97639.1| peptide chain release factor 1 [Shigella flexneri 2930-71]
 gi|333005050|gb|EGK24570.1| peptide chain release factor 1 [Shigella flexneri VA-6]
 gi|333005356|gb|EGK24874.1| peptide chain release factor 1 [Shigella flexneri K-218]
 gi|333007544|gb|EGK27022.1| peptide chain release factor 1 [Shigella flexneri K-272]
 gi|333019207|gb|EGK38494.1| peptide chain release factor 1 [Shigella flexneri K-304]
 gi|333019924|gb|EGK39196.1| peptide chain release factor 1 [Shigella flexneri K-227]
          Length = 360

 Score =  195 bits (495), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|15801440|ref|NP_287457.1| peptide chain release factor 1 [Escherichia coli O157:H7 EDL933]
 gi|12514924|gb|AAG56069.1|AE005338_9 peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 360

 Score =  195 bits (495), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|114704325|ref|ZP_01437233.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
 gi|114539110|gb|EAU42230.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
          Length = 359

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 153/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+AE  ++K E L   +GE  G K     
Sbjct: 107 ADEKGAILEIRAGTGGSEAGLFAGDLYRMYQRYAELNRWKVELLSASEGEVGGFKEVIAA 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D I+I++   D RID
Sbjct: 167 IKGNGVFSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-IDIDVRNEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+AQA  +L+AKLY++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAQAMQVLKAKLYDMERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            ++      + K+++G G    +IR+Y   P   V D R N+       V++G++++ + 
Sbjct: 285 YDD--ERSAARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIEGEMEELVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALVA 345


>gi|160893851|ref|ZP_02074634.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
 gi|156864503|gb|EDO57934.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
          Length = 358

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/351 (36%), Positives = 203/351 (57%), Gaps = 18/351 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ V RL  LN +  DP +  +  + + LM+E+  L   +   KE +D    + D
Sbjct: 1   MFDKLEDLVDRLDTLNNQLTDPDIVSDQNKFRKLMKEQSELTPIVEKYKEYKDAKQTIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124
           +L++LE   +E+   + +E    L   K  VE  + E     L     DS +  +E+ AG
Sbjct: 61  SLLMLEEENDEELREMAKE---ELNEAKATVEKTENELKILLLPKDPNDSKNVIVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E
Sbjct: 118 AGGDEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ RI   +S  R HTS  ++ V P  ++ +++EI+E+D RID  RASG GGQ VN
Sbjct: 178 SGVHRVQRIPKTESGGRIHTSTVTVAVMPEAEE-VDVEINENDIRIDVMRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +        K+
Sbjct: 237 TTDSAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAE--AADRKS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   V D R  +       +L+GDL++ + + +A
Sbjct: 295 QIGTGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLEQILNGDLNEIIDSLIA 344


>gi|146283509|ref|YP_001173662.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|166223591|sp|A4VPB9|RF1_PSEU5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145571714|gb|ABP80820.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/245 (43%), Positives = 151/245 (61%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY+R+AEK+ ++ E L   +GE  G K     +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   +EI+ ++ RIDT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A   L AK     LQ R
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAK-----LQDR 283

Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++ A    I E+ K  +G G    +IR+Y   P   V D R N+   S ++V+ G ++  
Sbjct: 284 QDAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQV 342

Query: 347 MKATL 351
           ++  L
Sbjct: 343 IEPLL 347


>gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|32171519|sp|Q888C1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/314 (38%), Positives = 184/314 (58%), Gaps = 22/314 (7%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + +
Sbjct: 53  KQLARVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQ 99

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           +   LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE
Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   I
Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPKTESQGRIHTSACTVAVLPEPDEQQAI 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L 
Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           AKL   + Q     + I    K  +G G    +IR+Y   P   V D R N+   S  +V
Sbjct: 278 AKLN--DQQTSAAASAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEV 334

Query: 339 LDGDLDDFMKATLA 352
           L G +D  ++  LA
Sbjct: 335 LAGGVDAVIEPLLA 348


>gi|191166656|ref|ZP_03028484.1| peptide chain release factor 1 [Escherichia coli B7A]
 gi|190903305|gb|EDV63026.1| peptide chain release factor 1 [Escherichia coli B7A]
          Length = 321

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 68  DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 127

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 128 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 187

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 188 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 247

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 248 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 299


>gi|228474912|ref|ZP_04059641.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
 gi|228271144|gb|EEK12524.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
          Length = 358

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 192/346 (55%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60

Query: 72  LLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           + E+  E DD     +L+E +  L+    E+E +Q + LL      D  D  +E+ A AG
Sbjct: 61  IDEMLTETDDKEEIEMLKEEALGLKSELPELE-EQLKFLLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LLRMYT++AE + FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIE+   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEVRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG++     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHIPTGIIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    ++R+Y   P   V D R  +       +++G LD+ + A
Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340


>gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
 gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
          Length = 369

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 188/344 (54%), Gaps = 19/344 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            QRL  LN       +  ++ +   L RE   +        + + R  D     E+  E 
Sbjct: 13  AQRLDELNFLLSREDIMGDMKQFLALSREHNEVTAIAGRYAQYRQRETDLSSAREMLAEP 72

Query: 80  DDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANM 136
           D   I QE  T+     ++LE E ++   LL  + D + +A+LE+ AG GG ES  +A  
Sbjct: 73  DMTDIAQEEITAAMADLVRLEDELQRL--LLPKDPDDARNAFLEIRAGTGGDESALFAAD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA--------YGWLKGEQGVH 188
           LLRMYTR+A++R +KTE +     E  G K   L I G NA        YG L+ E G H
Sbjct: 131 LLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAESPSGLGVYGELRFESGGH 190

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P  D+   ++I+ ++ RIDT+RASGAGGQH+N TDS
Sbjct: 191 RVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRIDTFRASGAGGQHINKTDS 250

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+V +CQ +RSQH+NKA+A  +L A++ E E  + E  A    + +  IG 
Sbjct: 251 AVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKE--RSERAAKDAATRRGLIGS 308

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R N+     S V++G LDD ++A
Sbjct: 309 GDRSDRIRTYNF-PQGRLTDHRINLTLYKLSQVMEGALDDVVQA 351


>gi|316984833|gb|EFV63790.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325140851|gb|EGC63361.1| peptide chain release factor 1 [Neisseria meningitidis CU385]
 gi|325144920|gb|EGC67204.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013]
          Length = 385

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 127 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 186

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 187 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 246

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 247 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 306

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 307 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 363

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 364 LEEITNALIA 373


>gi|51473710|ref|YP_067467.1| peptide chain release factor 1 [Rickettsia typhi str. Wilmington]
 gi|61214605|sp|Q68WK7|RF1_RICTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51460022|gb|AAU03985.1| peptide chain release factor 1 (RF-1) [Rickettsia typhi str.
           Wilmington]
          Length = 355

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/289 (41%), Positives = 178/289 (61%), Gaps = 9/289 (3%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGG 127
           N + LE+AL+     ++      L+ +  ++E     SLL   EADS  A +EV AG+GG
Sbjct: 61  NNLRLEVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L  MY R+AE + ++ E L I +    G K A+  IKG + +  LK E GV
Sbjct: 121 EEAALFAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIKGKDVFSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  +  ++I+I + D RIDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAE-GVDIKIEDKDLRIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+ V  Q E+SQHKNKA+A  +LRA+LYE + +++E+     +S + ++G
Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ--ERSDSRRWQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
            G    +IR+Y    +  V D R N+      +V+  G LD+F++A +A
Sbjct: 298 SGDRSERIRTYNF-LHGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345


>gi|325291372|ref|YP_004267553.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966773|gb|ADY57552.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 356

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/297 (40%), Positives = 174/297 (58%), Gaps = 8/297 (2%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAY 118
           KEI  +L D   LLE  L+ +     Q   D LQ  K E E K    LL  +  D  +  
Sbjct: 52  KEIFRQLKDAQALLEEELDSEMREFAQSEIDELQNRKEEYEEKLKILLLPKDPNDEKNVI 111

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A  L +MY+R+AE++ +KTE L     +  G K    +++G  AY
Sbjct: 112 MEIRAGAGGEEAALFAGDLYKMYSRYAEEQGWKTEMLSASYTDIGGFKEIIFMVEGRGAY 171

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ RI   +S  R HTS +++ V P  +D ++IEI+ ++ RID + +SG 
Sbjct: 172 SMLKYESGVHRVQRIPSTESGGRIHTSTATVAVLPEAED-VDIEINPNEIRIDIFCSSGP 230

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTT SAVR+THIPTG+VV CQ E+SQHKNK +A  +LRA+L  LE  ++E +  I
Sbjct: 231 GGQSVNTTQSAVRVTHIPTGIVVSCQDEKSQHKNKDKALKVLRARL--LEKAQQEAMGEI 288

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +  K+++G G    +IR+Y   P   V D R  +      ++L GD+ + + A +A
Sbjct: 289 AQERKSQVGTGDRSERIRTYNF-PQGRVSDHRIGLTLHKLENILLGDIQEIIDALIA 344


>gi|306842976|ref|ZP_07475610.1| peptide chain release factor 1 [Brucella sp. BO2]
 gi|306286904|gb|EFM58429.1| peptide chain release factor 1 [Brucella sp. BO2]
          Length = 315

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E +   +G+  G K     
Sbjct: 63  ADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIAT 122

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +D I+IEI   D RID
Sbjct: 123 VSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-IDIEIRNEDIRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK
Sbjct: 182 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 240

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +   ++ ++++G G    +IR+Y   P   V D R N+       V++GDLD+ + 
Sbjct: 241 AE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVD 297

Query: 349 ATLA 352
           A ++
Sbjct: 298 ALIS 301


>gi|256112206|ref|ZP_05453127.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 359

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++G+LD+ + A ++
Sbjct: 327 KLDRVMEGELDELVDALIS 345


>gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305]
 gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305]
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAY---LEVHAGAGGTESQDWAN 135
           DD  +    ++ ++  K E+E  +Q   +L    D ND Y   LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +     ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQ--EQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|161511164|ref|NP_539109.2| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|225853308|ref|YP_002733541.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260562790|ref|ZP_05833276.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|20139330|sp|Q8YJ95|RF1_BRUME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790867|sp|C0RFB5|RF1_BRUMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225641673|gb|ACO01587.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260152806|gb|EEW87898.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
          Length = 359

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 35  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 92  VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++G+LD+ + A ++
Sbjct: 327 KLDRVMEGELDELVDALIS 345


>gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
 gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 169/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  +    ++ +   K E+E  +Q   +L    D ND   A+LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E ++  + A   ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
          Length = 356

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+ +++ E +     E  G K   + I
Sbjct: 103 DERNIFLEIRAGTGGDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  ++ I+ +D RIDT
Sbjct: 163 VGNGAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  R
Sbjct: 223 YRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--R 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ +    + K+ IG G    +IR+Y   P   + D R N+       ++DGDL +   A
Sbjct: 281 EQQSQEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNA 339

Query: 350 TLA 352
             A
Sbjct: 340 LAA 342


>gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 169/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  +    ++ +   K E+E  +Q   +L    D ND   A+LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E ++  + A   ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|161621297|ref|YP_585342.2| peptide chain release factor 1 [Cupriavidus metallidurans CH34]
 gi|119361586|sp|Q1LIF3|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/292 (40%), Positives = 169/292 (57%), Gaps = 18/292 (6%)

Query: 66  LCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           L D+  + E A +E D +   LQ   ++LQ + L  +     +LL          LE+ A
Sbjct: 68  LLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLL----------LEIRA 117

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG ES  +A  LLRMYTR+AE+R+++ E +     +  G K   + I G  A+  LK 
Sbjct: 118 GTGGEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKF 177

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ V P  D+  E+EI+ SD R+DT+RASGAGGQHV
Sbjct: 178 ESGGHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHV 237

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A++ +++L  R   A    + +
Sbjct: 238 NKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRR 295

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             IG G    +IR+Y   P   V D R N+       ++DGDLD+ + A  A
Sbjct: 296 NLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSA 346


>gi|332342793|gb|AEE56127.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88]
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I  +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIKPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 360

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/272 (40%), Positives = 163/272 (59%), Gaps = 10/272 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + LQ  K   E   +Q + LL      D  +A++EV AG GG E+  +A 
Sbjct: 70  DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R+++ E +  ++GE  G K     I G   YG LK E G HR+ R+  
Sbjct: 130 DLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312
           PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G +    
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRN 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           R+Y   P   V D R N+      +V++G LD
Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 360

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/314 (38%), Positives = 184/314 (58%), Gaps = 22/314 (7%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + +
Sbjct: 53  KQLARVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQ 99

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           +   LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE
Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   I
Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L 
Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           AKL   + Q     + I    K  +G G    +IR+Y   P   V D R N+   S  +V
Sbjct: 278 AKLN--DQQTSAAASAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEV 334

Query: 339 LDGDLDDFMKATLA 352
           L G +D  ++  LA
Sbjct: 335 LAGGVDAVIEPLLA 348


>gi|190151400|ref|YP_001969925.1| peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303250479|ref|ZP_07336676.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303251821|ref|ZP_07337992.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307249121|ref|ZP_07531128.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251520|ref|ZP_07533427.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256019|ref|ZP_07537807.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262579|ref|ZP_07544210.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|238692365|sp|B3GZJ0|RF1_ACTP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189916531|gb|ACE62783.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649251|gb|EFL79436.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302650467|gb|EFL80626.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306854409|gb|EFM86605.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860984|gb|EFM92990.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865441|gb|EFM97336.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306872077|gb|EFN03790.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 360

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 170/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  + +  ++ +   K E+E  +Q   +L    D ND   A+LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E ++  + A   ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|265999301|ref|ZP_05465736.2| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|17982074|gb|AAL51373.1| bacterial peptide chain release factor 1 (rf-1) [Brucella
           melitensis bv. 1 str. 16M]
 gi|263093126|gb|EEZ17261.1| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|326409872|gb|ADZ66937.1| peptide chain release factor 1 [Brucella melitensis M28]
 gi|326539585|gb|ADZ87800.1| peptide chain release factor 1 [Brucella melitensis M5-90]
          Length = 377

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 53  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++G+LD+ + A ++
Sbjct: 345 KLDRVMEGELDELVDALIS 363


>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
           arsenicoxydans]
          Length = 361

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+ +++ E +     E  G K   + I
Sbjct: 108 DERNIFLEIRAGTGGDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  ++ I+ +D RIDT
Sbjct: 168 VGNGAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  R
Sbjct: 228 YRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--R 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ +    + K+ IG G    +IR+Y   P   + D R N+       ++DGDL +   A
Sbjct: 286 EQQSQEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNA 344

Query: 350 TLA 352
             A
Sbjct: 345 LAA 347


>gi|165977491|ref|YP_001653084.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877592|gb|ABY70640.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 333

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 170/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  + +  ++ +   K E+E  +Q   +L    D ND   A+LE+ AG GG E+  +A 
Sbjct: 43  DDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 102

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 103 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 162

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 163 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 222

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E ++  + A   ++ +  +G G    +I
Sbjct: 223 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 280

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 281 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 318


>gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
 gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
          Length = 361

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Vibrio angustum S14]
 gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14]
          Length = 362

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/291 (38%), Positives = 171/291 (58%), Gaps = 10/291 (3%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123
           ++L+  E   +EDD  + +   + ++  K E+E    E  +L    D ND    ++E+ A
Sbjct: 60  EDLVAAEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  +A  L RMY+++AE R ++ E +  +  E+ G K     + G   YG LK 
Sbjct: 120 GAGGDEAGIFAGDLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILKF 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D +IDT+RASGAGGQHV
Sbjct: 180 ESGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQHV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A    + +
Sbjct: 240 NTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRR 297

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +G G    +IR+Y   P   V D R  +     ++V++GDLD  ++   
Sbjct: 298 NLLGSGDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVF 347


>gi|294787740|ref|ZP_06752984.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
 gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
          Length = 358

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/272 (41%), Positives = 165/272 (60%), Gaps = 10/272 (3%)

Query: 88  TSDNLQRIKLEVEYKQFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTR 143
            ++ ++  K ++E   FE    LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R
Sbjct: 78  AAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSR 137

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE+ +++TE +   + +  G K   + + G  AY  LK E G HR+ R+   +S  R H
Sbjct: 138 FAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHRVQRVPTTESQGRIH 197

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ V P  D+  EI+++ +D RIDT+RASGAGGQH+N TDSA+RITH+PTG+VV+C
Sbjct: 198 TSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSAIRITHLPTGMVVEC 257

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q  RSQH NKAQA  +L A+L   + QKRE  A      K+ IG G    +IR+Y   P 
Sbjct: 258 QDGRSQHANKAQAMKVLAARLN--DKQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQ 314

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             V D R N+       V+DGD+++   A +A
Sbjct: 315 GRVTDHRINLTLHKLDFVMDGDMEEITSALIA 346


>gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor
           Methylation By Prmc
          Length = 360

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +++ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627]
 gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627]
          Length = 360

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  DA+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERDAFLEVRAGTGGDEAALFAGDLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|169832291|ref|YP_001718273.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|238688348|sp|B1I6L2|RF1_DESAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169639135|gb|ACA60641.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 355

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 181/306 (59%), Gaps = 26/306 (8%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           +D+A   ++E QD       L ELA  E +  +L+E SD         E ++   +L   
Sbjct: 58  MDDARQMLREEQD-----AELRELA--ESEVEVLRERSD---------ELRRRLRVLLLP 101

Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
            D ND     +E+ AG GG E+  +A  LLRMY R+AE+R ++ E L +++ +  GIK A
Sbjct: 102 KDPNDEKNVIIEIRAGTGGEEAALFAGDLLRMYLRYAERRGWRAEMLNVNETDLGGIKEA 161

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
            +L++G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++EI   D 
Sbjct: 162 IVLLEGRGAYSELKFESGVHRVQRVPATESGGRIHTSAATVAVLPEAEE-VDVEIRPEDL 220

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RID + ++G GGQ VNTT SAVR+TH+P+G+VV CQ E+SQHKN+ +A  +LRA+L +  
Sbjct: 221 RIDVFCSTGPGGQSVNTTQSAVRVTHLPSGIVVSCQDEKSQHKNRDKAMKVLRARLLDKA 280

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            Q+++E   I  S KT++G G    +IR+Y   P   V D R N+      +VL GDL +
Sbjct: 281 QQEQQE--RIASSRKTQVGTGDRSERIRTYNF-PQNRVTDHRLNLTLYRLEEVLQGDLHE 337

Query: 346 FMKATL 351
           F+ A +
Sbjct: 338 FVSALI 343


>gi|324113971|gb|EGC07945.1| peptide chain release [Escherichia fergusonii B253]
          Length = 360

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEGRRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|238755548|ref|ZP_04616886.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
 gi|238706228|gb|EEP98607.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
          Length = 360

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 147/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   DGE  G K     +
Sbjct: 107 DERGCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEVMSASDGEHGGYKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGEGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +    + E+S+    +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|227873770|ref|ZP_03991999.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
 gi|227840386|gb|EEJ50787.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
          Length = 358

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/276 (40%), Positives = 170/276 (61%), Gaps = 15/276 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LE+A EE     LQ+  ++ +R+  E+   Q   L   E D  +  +E+  GAGG E+ 
Sbjct: 73  ILEMAKEE-----LQQAKEDQERLTKEI---QLLLLPKDENDDKNIVMEIRGGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AEKR +KTE +  ++    G+K    ++ G  AY  LK E GVHR+ 
Sbjct: 125 LFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVDGHGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V+D +++EI+ +D R++ +R+SGAGGQH+N T SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVMPEVED-VQVEINPADVRMEVFRSSGAGGQHINKTSSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+V +CQ+ERSQ +N+ +A  +LRA+LYE+EL+K++   N  E  ++++G G  
Sbjct: 244 LIHEPTGLVAECQEERSQVQNREKAMRLLRARLYEIELEKQQS-ENAAE-KRSQLGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             +IR+Y   P   V D R  +   +   VL GDLD
Sbjct: 302 SEKIRTYNF-PQGRVTDHRIKLTLYNIDAVLSGDLD 336


>gi|297517277|ref|ZP_06935663.1| peptide chain release factor 1 [Escherichia coli OP50]
          Length = 274

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 21  DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 80

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 81  SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 140

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 141 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 200

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 201 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 252


>gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
 gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
          Length = 361

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|265993634|ref|ZP_06106191.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764615|gb|EEZ10536.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 372

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 48  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 104

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 164

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+   
Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 339

Query: 334 SPSDVLDGDLDDFMKATLA 352
               V++G+LD+ + A ++
Sbjct: 340 KLDRVMEGELDELVDALIS 358


>gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
 gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
          Length = 358

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/348 (36%), Positives = 199/348 (57%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD  ++ + R   L ++  +P +  N    + LM+E+  +   +   KE    +  + D
Sbjct: 1   MFDKLEDLLIRYEELMSELSEPDVANNPERFRKLMKEQSDILPIVEAYKEYKQCKQNIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
           +L +LE   +E+   + +E  ++ +    E+E +    LL  +  D  +  +E+ AGAGG
Sbjct: 61  SLAMLEEESDEEMRELAKEELNDAKNRVAELENELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE + +KTE +E  D    G+KS T +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYQHYAETKNWKTEIMECDDTGIGGMKSVTFMITGAGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  +D ++++I E D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAED-VDVQIDEKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KL++LE QK  +     E  K++IG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLFDLEQQKAHDAE--AELRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R N+       +++GD+ + + A +A
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIA 344


>gi|319779045|ref|YP_004129958.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
 gi|317109069|gb|ADU91815.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
          Length = 355

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/336 (34%), Positives = 186/336 (55%), Gaps = 7/336 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QRL  ++    +P +  ++   + L RER  +D  +   KE +    D    +E+  + D
Sbjct: 10  QRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEGDLNTAVEMMSDPD 69

Query: 81  DCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              +  +E     +RI+   +  Q E L     D    +LE+ AG GG ES  +   L R
Sbjct: 70  LKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTGGDESAIFTGDLFR 129

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE++ +K E +  +  E  G +     I+G   YG LK E G HR+ R+   +S 
Sbjct: 130 MYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESGAHRVQRVPETESQ 189

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P  D+  E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+
Sbjct: 190 GRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITHLPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           V +CQ +RSQHKNKA+A ++L A++   +++++E+ +      K+ +G G    +IR+Y 
Sbjct: 250 VAECQDDRSQHKNKARAMSVLAARIN--DIKRQEQQSKEAAERKSLVGSGDRSERIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             P   V D R N+       +++G LD+   A ++
Sbjct: 308 Y-PQGRVTDHRINLTLYKLQQIMEGSLDELTNALIS 342


>gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
 gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|31076863|sp|Q87RN4|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
          Length = 362

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 11/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  D+L   E   +EDD  + +   + 
Sbjct: 25  DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEEMAKEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347
           D R N+     ++V++GDL   +
Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLI 343


>gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202]
 gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202]
          Length = 360

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAY---LEVHAGAGGTESQDWAN 135
           DD  +    ++ ++  K E+E  +Q   +L    D ND Y   LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +     ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQ--EQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
 gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
          Length = 361

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20]
 gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031]
 gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd
           KW20]
 gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21]
 gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
 gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031]
          Length = 361

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
 gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
          Length = 358

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
 gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
          Length = 358

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG E+  +A  LLRMYTR+AE+ +++TE +   + +  G K   + +
Sbjct: 107 DDKNIFIEIRAGTGGDEAALFAGDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE+++ D RIDT
Sbjct: 167 VGLGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NK +A  +L A+L   ++QKR
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLN--DIQKR 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD+D+   A
Sbjct: 285 EAHAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMDEITSA 343

Query: 350 TLA 352
            +A
Sbjct: 344 LIA 346


>gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
 gi|166223578|sp|A6Q162|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
          Length = 354

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 193/340 (56%), Gaps = 14/340 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELA 76
           +QR + +N     P + Q++ +   L +E+  ++  +   KE   I + + +N  L+E  
Sbjct: 10  IQRYNEINELLSSPEITQDIKKMTALSKEQSEIEPIVEKAKEYMNILEAIEENRSLIE-- 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
            +E+   + +E    L+  K ++E +    L+S +  D  D YLE+ AG GG E+  +A+
Sbjct: 68  -DEELGELAKEELKELEPKKEQLEEEIKVLLISKDPNDEKDIYLEIRAGTGGEEAALFAS 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L + Y R+AEK+ ++ E +   + +  G K     IKG   Y  LK E G HR+ R+  
Sbjct: 127 DLFKAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKYEAGTHRVQRVPE 186

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ + P VDD +++EI+ +D +ID YR+SG GGQ VNTTDSAVRITHI
Sbjct: 187 TESQGRIHTSAVTVAIMPEVDD-VDVEINPNDLKIDVYRSSGHGGQSVNTTDSAVRITHI 245

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV  Q E+SQHKNK +A  +L+A+++E  +  RE+   + +  K ++G G    +I
Sbjct: 246 PTGIVVAMQDEKSQHKNKEKALKILKARIFEKRM--REQQEALAKDRKEQVGSGDRSERI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   V D R  +      +V+ GDLD  ++  +A
Sbjct: 304 RTYNF-PQNRVTDHRIGLTLYKLEEVMQGDLDQIIEPLIA 342


>gi|1526559|dbj|BAA08795.1| peptide termination factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 370

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/345 (36%), Positives = 191/345 (55%), Gaps = 25/345 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELAL 77
           +RL  +    ED ++ +++ +   L +E+ +L+  +  F+  K+  D + D   +LE   
Sbjct: 14  KRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAILE--- 70

Query: 78  EEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129
            E D  +++       E +D ++ ++  +E    E LL  +  D  +  +E+   AGG E
Sbjct: 71  NEKDSELIELAKIELDENNDKVEHLQQVIE----EMLLPKDPNDEKNVIIEIRGAAGGDE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR
Sbjct: 127 ANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSA
Sbjct: 187 VQRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A    + K  +G G
Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               + R+Y   P   V D R  +       V++G++D+F+ A +
Sbjct: 304 ARSEKFRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347


>gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114]
 gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114]
          Length = 358

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATENQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
 gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia]
 gi|81599140|sp|Q5PAH2|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790858|sp|B9KIV2|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
          Length = 359

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/255 (44%), Positives = 160/255 (62%), Gaps = 10/255 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L   + DS  A LE+ AG GG E+  +   L RMY ++AE++ +K E + I     
Sbjct: 98  QLSLLPKDKDDSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGI 157

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K A+L I G + +  LK E GVHR+ R+   +S+ R HTS +++ V P V++ ++++
Sbjct: 158 GGYKEASLCIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLK 216

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I E D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKNK++A  +LRA
Sbjct: 217 IDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRA 276

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDV 338
           +LY LE QK E+   I +  K++IG G    +IR+Y  LQ    + D R N+       +
Sbjct: 277 RLYNLEKQKIED--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINMTLYRLEHI 332

Query: 339 L-DGDLDDFMKATLA 352
           + +GDLD+F+ A +A
Sbjct: 333 MKEGDLDEFVDALIA 347


>gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
 gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
          Length = 358

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|13472970|ref|NP_104537.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
 gi|20139342|sp|Q98G93|RF1_RHILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14023718|dbj|BAB50323.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
          Length = 359

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/282 (41%), Positives = 167/282 (59%), Gaps = 18/282 (6%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           AL E D   ++E  + LQ        K  + LL     AD  +A LE+ AG GG E+  +
Sbjct: 77  ALAEADLPDVEERIEALQ--------KDIQILLLPKDAADDKNAILEIRAGTGGDEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+A +R ++ E +   DG+  G K     + G   +  LK E GVHR+ R+
Sbjct: 129 AGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIATVSGKGVFAHLKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +++ R HTS +++ V P  ++ ++IEI   D RIDT RASG+GGQHVNTTDSAVRIT
Sbjct: 189 PATEASGRIHTSAATVAVLPEAEE-VDIEIRAEDIRIDTMRASGSGGQHVNTTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG++V  Q E+SQH+N+A+A  +LRA+LY+LE  K +E     ES K+++G G    
Sbjct: 248 HLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERSKADE--ERSESRKSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       V+ G+LD+ + A +A
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIVDALIA 345


>gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
          Length = 362

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 11/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  D+L   E   +EDD  + +   + 
Sbjct: 25  DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEEMAKEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347
           D R N+     ++V++GDL   +
Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLI 343


>gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 360

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 199/352 (56%), Gaps = 26/352 (7%)

Query: 17  DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRL 66
           D+ + +L  L+ + E       DP +  +  + +   +E   L+  ++     K++ + +
Sbjct: 3   DSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDI 62

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVH 122
            +  ILL      DD  +    ++ +   K E+E  +Q   +L    D ND   A+LE+ 
Sbjct: 63  EEAQILL------DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GG E+  +A  L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E ++  + A   ++ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTR 294

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|89094907|ref|ZP_01167839.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
 gi|89080864|gb|EAR60104.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
          Length = 362

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 150/234 (64%), Gaps = 6/234 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LEV AG GG E+  +A  L RMY+R+AE + ++ E +  ++GE  G K     I
Sbjct: 109 DSRNVFLEVRAGTGGDEAAIFAGDLFRMYSRYAEVQGWRVEVVSANEGEHGGYKEIISRI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS  ++ +   +D+S EIEI+++D RIDT
Sbjct: 169 VGTNVYSQLKFESGAHRVQRVPETESQGRIHTSACTVAIMAEMDESAEIEINKADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITHIPTGVVV+CQ+ERSQHKN+A+A ++L ++L     ++ 
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHIPTGVVVECQEERSQHKNRAKAMSLLASRL--QAAEEE 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            + A +  + K+ +G G    +IR+Y   P   V D R N+      +V+ G+L
Sbjct: 287 RQAAELASTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLQEVISGEL 339


>gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
 gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
          Length = 360

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/290 (40%), Positives = 172/290 (59%), Gaps = 10/290 (3%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAG 124
           N  L E  L  DD  + +     ++  K E+E  +Q   +L    D ND    YLE+ AG
Sbjct: 59  NANLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAG 118

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K    L+ G  AYG LK E
Sbjct: 119 TGGDEAGIFAGDLFRMYSRYAETKRWRIEVLSENESEQGGFKEIIALVSGDGAYGQLKFE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS  ++ V P + +S   EI+ SD RIDTYRASGAGGQH+N
Sbjct: 179 SGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHIN 238

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L  ++ ++ +      ++ + 
Sbjct: 239 KTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRL--VQQEQEKLEQEQADTRRN 296

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +G G    +IR+Y   P   V D R N+      +V++G +DD ++  +
Sbjct: 297 LLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPII 345


>gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str.
           Mississippi]
          Length = 359

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/245 (45%), Positives = 157/245 (64%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS  A LE+ AG GG E+  +   L RMY ++AE++ +K E + I      G K A+L I
Sbjct: 108 DSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   +S+ R HTS +++ V P V++ ++++I E D RID 
Sbjct: 168 GGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLKIDEKDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK 
Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKI 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
           E+   I +  K++IG G    +IR+Y  LQ    + D R N+       ++ +GDLD+F+
Sbjct: 287 ED--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINMTLYRLEHIMKEGDLDEFV 342

Query: 348 KATLA 352
            A +A
Sbjct: 343 DALIA 347


>gi|61252075|sp|P43917|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 167 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 227 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 286 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 360

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 199/352 (56%), Gaps = 26/352 (7%)

Query: 17  DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRL 66
           D+ + +L  L+ + E       DP +  +  + +   +E   L+  ++     K++ + +
Sbjct: 3   DSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDI 62

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVH 122
            +  ILL      DD  +    ++ +   K E+E  +Q   +L    D ND   A+LE+ 
Sbjct: 63  EEAQILL------DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GG E+  +A  L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK
Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQH
Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQH 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E ++  + A   ++ 
Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTR 294

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
 gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
          Length = 359

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/245 (45%), Positives = 157/245 (64%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS  A LE+ AG GG E+  +   L RMY ++AE++ +K E + I      G K A+L I
Sbjct: 108 DSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   +S+ R HTS +++ V P V++ ++++I E D RID 
Sbjct: 168 GGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLKIDEKDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK 
Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKI 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
           E+   I +  K++IG G    +IR+Y  LQ    + D R N+       ++ +GDLD+F+
Sbjct: 287 ED--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINMTLYRLEHIMKEGDLDEFV 342

Query: 348 KATLA 352
            A +A
Sbjct: 343 DALIA 347


>gi|308389808|gb|ADO32128.1| peptide chain release factor I [Neisseria meningitidis alpha710]
 gi|325130724|gb|EGC53462.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304]
 gi|325136665|gb|EGC59265.1| peptide chain release factor 1 [Neisseria meningitidis M0579]
 gi|325201657|gb|ADY97111.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149]
 gi|325208608|gb|ADZ04060.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33]
          Length = 358

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITNALIA 346


>gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
          Length = 361

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      ++++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEIMNGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|83951817|ref|ZP_00960549.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
 gi|83836823|gb|EAP76120.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
          Length = 349

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/279 (41%), Positives = 162/279 (58%), Gaps = 18/279 (6%)

Query: 81  DCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +   D L+ +K E+  +    Q   L   EAD+  A +E+  G GG E+  +A  
Sbjct: 64  DPEMRELAEDELRTLKAELPGREKALQLALLPKDEADARPAIIEIRPGTGGEEAALFAGD 123

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE R ++ E +E    E  GIK A + +KG + +  LK E GVHR+ R+   
Sbjct: 124 LLRMYARYAEARGWQFEVIEEAQTELGGIKEAVVHVKGAHVFARLKYESGVHRVQRVPET 183

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P  +D ++I I  SD RIDT RASGAGGQHVNTTDSAVRITHIP
Sbjct: 184 ESGGRIHTSAATVAVLPEAED-VDIHIDPSDIRIDTMRASGAGGQHVNTTDSAVRITHIP 242

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIANIGESSKTEIGWGR 310
           +G+VV    E+SQH+N+  A  +L+ +LY+LE QK       +  A +G   ++E     
Sbjct: 243 SGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQKVHDARSADRAAQVGSGDRSE----- 296

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   + D R N+       V+ GDLDD + A
Sbjct: 297 RIRTYNF-PQGRMTDHRINLTLYKLDQVMAGDLDDIIDA 334


>gi|331703153|ref|YP_004399840.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801708|emb|CBW53861.1| Peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 364

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/332 (36%), Positives = 188/332 (56%), Gaps = 19/332 (5%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELALEEDDCSI--- 84
           ED ++ +++ +   L +E+ +L+  +  F+  K+  + + D   +LE   +++   +   
Sbjct: 24  EDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKAILENEKDQELIELAKI 83

Query: 85  -LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            L E +D ++ ++  +E    E LL  +  D  +  +E+   AGG E+  +A  LLRMY 
Sbjct: 84  ELDENNDKVEHLQQVIE----EMLLPKDPNDDKNVIVEIRGAAGGDEANIFAGDLLRMYK 139

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ R+   ++  R 
Sbjct: 140 LYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQRVPKTEAKGRI 199

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVRITH+PTG+VV 
Sbjct: 200 QTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVRITHLPTGIVVT 258

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
            Q  RSQH NK  A  MLRAK+YE E++K++  A    + K  +G G    +IR+Y   P
Sbjct: 259 SQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTGARSEKIRTYNY-P 315

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              V D R  +       V++G++D+F+ A +
Sbjct: 316 QNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347


>gi|315924395|ref|ZP_07920617.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622274|gb|EFV02233.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 364

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 155/242 (64%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMY+R+AE++ +K E L  +  +  GIK     I
Sbjct: 115 DERNVIVEIRAGAGGDEAALFAGDLFRMYSRYAERQSWKIEILSSNILDLGGIKEINFAI 174

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  DD +E++++ +D R+D 
Sbjct: 175 QGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEADD-VEVDLNPNDIRVDV 233

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVR+THIP+G+VV CQ E+SQ KNKA+A  +L+A+LY+LE+QK+
Sbjct: 234 YRSSGNGGQCVNTTDSAVRLTHIPSGLVVTCQDEKSQIKNKAKAMKVLKARLYDLEMQKQ 293

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  + I E  K+++G G    +IR+Y   P   + D R           LDG++D+ + A
Sbjct: 294 Q--SAISEERKSQVGTGDRSERIRTYNF-PQGRITDHRIGQTVHQLEAFLDGEIDEMINA 350

Query: 350 TL 351
            +
Sbjct: 351 LI 352


>gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
           2594]
          Length = 358

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
          Length = 358

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1]
 gi|166223563|sp|A1WVQ8|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira
           halophila SL1]
          Length = 363

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 150/238 (63%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AGAGG E+  +A  LLRMY R+AE++ +KTE L   +GE  G +     +
Sbjct: 109 DQRNIFLEVRAGAGGDEAALFAGDLLRMYMRYAERQGWKTEILSAREGEHGGYREVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS  ++ + P +D+   IE++ +D R+DT
Sbjct: 169 SGRSVYARLKFESGAHRVQRVPATESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+P+G+VV+CQ ERSQ+KN+A+A  +L+A+L E E  K+
Sbjct: 229 FRSSGAGGQHVNTTDSAIRITHLPSGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +  +   E  +  +G G    +IR+Y   P   V D R  +       V++G +D+ +
Sbjct: 289 Q--SERSEQRRLAVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKLEQVMEGGMDELL 343


>gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
 gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
          Length = 360

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 170/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  +    ++ +   K E+E  +Q   +L    D ND   A+LE+ AG GG E+  +A 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A ++L +++ ++E ++  + A   ++ +  +G G    +I
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   + D R N+      +V++G +D+ ++  +
Sbjct: 308 RTYNY-PQGRITDHRINLTVYRLDEVMNGKIDELIQPII 345


>gi|262375291|ref|ZP_06068524.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
 gi|262309545|gb|EEY90675.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
          Length = 362

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/238 (43%), Positives = 146/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K    LI
Sbjct: 107 DANSAYLEIRAGTGGDEAAIFSGDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    ++I+ +D RIDT
Sbjct: 167 NGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTSVDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHVNKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       V++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELL 341


>gi|152979102|ref|YP_001344731.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
 gi|150840825|gb|ABR74796.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
          Length = 374

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 155/244 (63%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +AYLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 121 DEYNAYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRIETLSANESEQGGYKEIIVKV 180

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+ +D RIDT
Sbjct: 181 IGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPETELPEINPTDLRIDT 240

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--YELELQ 290
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++   E E Q
Sbjct: 241 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIAQAEQEKQ 300

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            RE+     ++ +  +G G    +IR+Y   P   V D R N+      +V++G +D+ +
Sbjct: 301 AREQ----ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELI 355

Query: 348 KATL 351
           +  +
Sbjct: 356 QPII 359


>gi|261379805|ref|ZP_05984378.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
 gi|284797490|gb|EFC52837.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
          Length = 358

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAALLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica ST-640]
 gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06]
          Length = 358

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
 gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
          Length = 361

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|322832986|ref|YP_004213013.1| peptide chain release factor 1 [Rahnella sp. Y9602]
 gi|321168187|gb|ADW73886.1| peptide chain release factor 1 [Rahnella sp. Y9602]
          Length = 360

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 147/242 (60%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LE+ AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERGCFLEIRAGTGGDEAAIFAGDLFRMYSRYAEMRRWRVEIVSASEGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG  K E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGEGAYGQFKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    + +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 Q--AEEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|254805442|ref|YP_003083663.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
 gi|254668984|emb|CBA07320.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
          Length = 358

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L++   A +A
Sbjct: 337 LEEITNALIA 346


>gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
 gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
          Length = 362

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/317 (37%), Positives = 176/317 (55%), Gaps = 13/317 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEY 101
           + L RER  L+  +      Q   C+  I     + ED +     +T       KL +  
Sbjct: 36  RKLNRERAELEPVVDLFHAYQ--ACEGDIAAAREMAEDPEMREFADTEIKEGEAKLALLD 93

Query: 102 KQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           K+ ++ L  + D ND    +LEV AG GG E+  +A  L RMY+R+AE+R+++ E +   
Sbjct: 94  KELQTQLLPK-DPNDERSVFLEVRAGTGGDEAALFAGDLFRMYSRFAERRRWQVEVVSES 152

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            GE  G K     I G  AY  LK E G HR+ R+   ++  R HTS  ++ + P VD+ 
Sbjct: 153 PGEMGGYKEIIARIAGQGAYSVLKFESGAHRVQRVPATETQGRVHTSACTVAIMPEVDEV 212

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITHIPTGVVV+CQ  RSQH+NKAQA  
Sbjct: 213 NDVVLNNADLRIDTFRASGAGGQHINKTDSAVRITHIPTGVVVECQDGRSQHQNKAQAMR 272

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +L A++   + Q R + A    + K+ +G G    +IR+Y   P   V D R N+     
Sbjct: 273 VLCARIK--DAQVRAQNAETAATRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKM 329

Query: 336 SDVLDGDLDDFMKATLA 352
             ++DG++ +   A +A
Sbjct: 330 DAIMDGEISELTGALMA 346


>gi|157370232|ref|YP_001478221.1| peptide chain release factor 1 [Serratia proteamaculans 568]
 gi|166977369|sp|A8GDA3|RF1_SERP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157321996|gb|ABV41093.1| peptide chain release factor 1 [Serratia proteamaculans 568]
          Length = 361

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LEV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERDCFLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P V ++   EI+  D +IDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAVPEAELPEINAGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|256751358|ref|ZP_05492237.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749740|gb|EEU62765.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 246

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/236 (43%), Positives = 154/236 (65%), Gaps = 7/236 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   ++  R HTS +++ V P V++ +++EI+ +D +ID +R+ G 
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPNDIKIDVFRSGGH 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I
Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQR--EI 177

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E+ K+++G G    +IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 232


>gi|268316168|ref|YP_003289887.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
 gi|262333702|gb|ACY47499.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
          Length = 360

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/325 (36%), Positives = 181/325 (55%), Gaps = 9/325 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----E 87
           DP +  +      L RE   L   +  I+  +  L +   L EL   E D  +++    E
Sbjct: 23  DPEVAADPKRLAELGREHASLRAVVEAIEAYERLLAEQESLRELIRTESDPELIRMARHE 82

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             +  +R+    E  +   +   E D  +A +E+ AG GG E+  +A  L RMY+R+AE+
Sbjct: 83  LEELEERLPAVEEDLRLRLIPQDEMDRRNAIVEIRAGTGGDEAALFAGDLFRMYSRFAER 142

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + +K E L+   G   G K     +KGP+ YG +K E GVHR+ R+   +S  R HTS +
Sbjct: 143 KGWKLEVLDASPGTVGGFKEIIFSLKGPDVYGTMKYESGVHRVQRVPATESQGRIHTSAA 202

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P  ++ +++EI   D RID +RASG GGQHVN T+SAVRITH+PTG+VV CQ E+
Sbjct: 203 SVVVLPEAEE-VDVEIRPEDLRIDVFRASGPGGQHVNRTESAVRITHVPTGIVVACQDEK 261

Query: 268 SQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD- 325
           SQH+N+ +A  +LRA+LYELE ++ R E   +  +S        +IR+Y   P   V D 
Sbjct: 262 SQHQNREKALRILRARLYELEQERQRAERDAVRRASIKTGDRSAKIRTYNF-PQDRVTDH 320

Query: 326 -LRTNIEKTSPSDVLDGDLDDFMKA 349
            L  +++      +++G+LD+ + A
Sbjct: 321 RLEGDLKNWPLHRIIEGELDELINA 345


>gi|331652249|ref|ZP_08353268.1| peptide chain release factor 1 [Escherichia coli M718]
 gi|331050527|gb|EGI22585.1| peptide chain release factor 1 [Escherichia coli M718]
          Length = 360

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+A+ R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYADARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|304386835|ref|ZP_07369099.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
 gi|304339089|gb|EFM05179.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
          Length = 358

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITNALIA 346


>gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18]
 gi|166223577|sp|A1KV95|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18]
 gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
 gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
 gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
          Length = 358

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|218768706|ref|YP_002343218.1| peptide chain release factor 1 [Neisseria meningitidis Z2491]
 gi|20139350|sp|Q9JT75|RF1_NEIMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121052714|emb|CAM09057.1| peptide chain release factor I [Neisseria meningitidis Z2491]
          Length = 358

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITNALIA 346


>gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
 gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
          Length = 358

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 188/349 (53%), Gaps = 19/349 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLC 67
            +FD  +  V R   +     DP +  +  + + L RE   L   +   +   +IQ  + 
Sbjct: 2   AIFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEIE 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDA---YLEVHA 123
           DN  L+     +DD  + +   + L  ++ E E+  +  +LL    D ND     LE+ A
Sbjct: 62  DNRELMR----DDDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRA 117

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L R Y+R+AEK ++K E +   +    G K    +I G N Y  LK 
Sbjct: 118 GTGGDEAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKY 177

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   ++  R HTS  ++ V P  ++ +++EI+ SD RID YRASGAGGQHV
Sbjct: 178 ESGTHRVQRVPETETQGRIHTSACTVAVLPEAEE-VDLEINPSDLRIDLYRASGAGGQHV 236

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTGVVV CQ E+SQHKNKA+A  +LR+++  L+  + E+ A +    K
Sbjct: 237 NKTESAVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRI--LDAMEAEKHAEMAADRK 294

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +++G G    +IR+Y   P     D R  +       ++ GDLD+   A
Sbjct: 295 SQVGSGDRSERIRTYNF-PQGRCTDHRIGLTLYKLDAIMQGDLDEVFDA 342


>gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
 gi|119361616|sp|Q4L7Z9|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 358

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 193/346 (55%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDSDKLRKYSKEQADLQKTVDVYRDYKSKKEEIAE 60

Query: 72  LLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           + E+  E +D     +L+E S +L+    E+E +Q + LL      D  D  +E+ A AG
Sbjct: 61  IDEMLNETEDKEEIEMLKEESASLKSAIPELE-EQLKFLLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LLRMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    ++R+Y   P   V D R  +       +++G LD+ + A
Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340


>gi|167587636|ref|ZP_02380024.1| peptide chain release factor 1 [Burkholderia ubonensis Bu]
          Length = 360

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/345 (36%), Positives = 190/345 (55%), Gaps = 17/345 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    RL+ LN      ++  ++ + + L RE   LD  +      +  L D     EL 
Sbjct: 10  DQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELDPVVGQYALWRQSLSDEAAAQELL 69

Query: 77  LEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
               D S+     D ++      ++LEVE ++   LL  +  D  + +LE+ AG GG ES
Sbjct: 70  ---GDASMRDFAEDEIRSARDRMVQLEVELQKM--LLPKDPNDDRNIFLEIRAGTGGDES 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+
Sbjct: 125 ALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAV
Sbjct: 185 QRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G 
Sbjct: 245 RVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 303 RSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIAALVS 346


>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
 gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
          Length = 360

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/322 (37%), Positives = 180/322 (55%), Gaps = 33/322 (10%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET-SDNLQRIKLEVEYKQ 103
           L RER  ++  ++  +E +             L E DC+  +E  +D   R   E+E  +
Sbjct: 38  LSRERAEIEPVVALYREHR-------------LAEADCATARELLADPEMRELGELELAE 84

Query: 104 FESLLSG-EA---------DSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            E+ +   EA         D NDA   +LE+ AG GG E+  +A  LLRMYTR+AE++++
Sbjct: 85  GEARIEALEAELQRALLPRDPNDARNLFLEIRAGTGGDEAALFAGDLLRMYTRYAERQRW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E +   + +  G K     + G  AY  LK E G HR+ R+   ++  R HTS  ++ 
Sbjct: 145 KVEIVSASESDLGGYKEVIARVVGNGAYSKLKFESGGHRVQRVPVTETQGRIHTSACTVA 204

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P  D+   ++I+ +D RIDT+RASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQH
Sbjct: 205 VLPEADEVEAVDINPADLRIDTFRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQH 264

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
           +NKAQA  +L A+LY+  +  R + +      K+ +G G    +IR+Y   P   V D R
Sbjct: 265 RNKAQAMAVLAARLYDARV--RAQQSAEAAQRKSLVGSGDRSERIRTYNF-PQGRVTDHR 321

Query: 328 TNIEKTSPSDVLDGDLDDFMKA 349
            N+       V+ G+LD+ + A
Sbjct: 322 INLTLYKLDAVMQGELDEIVDA 343


>gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
 gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
          Length = 355

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/250 (43%), Positives = 151/250 (60%), Gaps = 8/250 (3%)

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           LE + K F  L   EAD  +A +E+ AG GG E+  +A  L  MY + A    +KTE + 
Sbjct: 92  LETKIKIF-MLPKDEADEKNAIIEIRAGTGGLEASLFAGDLFEMYQKVASNNGWKTEIIS 150

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I D +  G K     + G N +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 151 ISDSDAGGYKEVVFSVTGKNVFSKLKFESGVHRVQRVPKTETQGRVHTSAATVAVLPEAE 210

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D ++++I E++ RID +R+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQHKNKA+A
Sbjct: 211 D-VDVKIDENELRIDVFRSSGPGGQSVNTTDSAVRITHIPSGIVVSQQDEKSQHKNKAKA 269

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LR+KLYELE  K E+      + K++IG G    +IR+Y   P   V D R N+   
Sbjct: 270 LKILRSKLYELERSKLEK--ERSSARKSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLH 326

Query: 334 SPSDVLDGDL 343
             SD L GD+
Sbjct: 327 KLSDFLSGDV 336


>gi|50365449|ref|YP_053874.1| peptide chain release factor 1 [Mesoplasma florum L1]
 gi|61214613|sp|Q6F0I3|RF1_MESFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50364005|gb|AAT75990.1| peptide chain release factor 1 [Mesoplasma florum L1]
          Length = 363

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 142/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  LLRMY  +AE + +K   L+ +  E  G    + ++
Sbjct: 110 DDKNVIVEIRGAAGGDEANIFAGDLLRMYKLYAETQNWKITMLDANSSEAGGFSQVSFMV 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   ++  R  TS +++ V P + D +EIEI  SD RIDT
Sbjct: 170 KGDRVYSKLKFESGAHRVQRVPKTEAKGRIQTSTATVAVLPEMSD-VEIEIKNSDLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTGVV   Q  RSQH NK  A  MLRA++YE EL+K+
Sbjct: 229 YRSSGAGGQHVNTTDSAVRITHIPTGVVAASQDGRSQHDNKDIAMTMLRARIYEAELEKQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    + K  +G G    +IR+Y   P   V D R  +       V++G +DDF+ A
Sbjct: 289 Q--AEADATRKNAVGTGARSEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGKIDDFIIA 345


>gi|300723054|ref|YP_003712352.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
 gi|297629569|emb|CBJ90172.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
          Length = 360

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P V ++   EI+  D +IDT
Sbjct: 167 SGEQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAILPEVPEAELPEINPGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR
Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMRKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E        +  +G G +    R+Y   P   V D R N+      ++++G LD  ++ 
Sbjct: 287 QEAE--ASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLEEIMEGKLDMLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|325527071|gb|EGD04495.1| peptide chain release factor 1 [Burkholderia sp. TJI49]
          Length = 360

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/262 (41%), Positives = 161/262 (61%), Gaps = 9/262 (3%)

Query: 95  IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++LEVE ++   LL  +  D  + +LE+ AG GG ES  +A  LLRMY R+AE+++++ E
Sbjct: 90  VRLEVELQKM--LLPKDPNDDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +     +  G K   + I G  AY  LK E G HR+ R+   ++  R HTS  ++ V P
Sbjct: 148 MMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK
Sbjct: 208 EADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNK 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A  +L A++   + Q  E+ A    + K+ IG G    +IR+Y   P   + D R N+
Sbjct: 268 DRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINL 324

Query: 331 EKTSPSDVLDGDLDDFMKATLA 352
                  ++DGDLD+ + A ++
Sbjct: 325 TLYRLEAIMDGDLDELIGALVS 346


>gi|197104299|ref|YP_002129676.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
 gi|196477719|gb|ACG77247.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
          Length = 377

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/285 (42%), Positives = 173/285 (60%), Gaps = 23/285 (8%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQD 132
           AL  D+   L+E    L+R   EV      +LL    D ++   A LEV AG GG E+  
Sbjct: 93  ALARDELEALKERLPELER---EV------ALLLAPKDKDENASAILEVRAGTGGDEAAL 143

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+A+ R ++ E   I +G+  G K     I G   +G LK E GVHR+ R
Sbjct: 144 FAGDLFRMYQRYAQTRGWRVEIDSISEGDAGGYKEIIASITGEGVFGRLKFESGVHRVQR 203

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P V+D +EIE+ + D RIDTYR+SGAGGQHVN TDSAVRI
Sbjct: 204 VPATEAQGRIHTSAATVAVLPEVED-VEIEVRDQDIRIDTYRSSGAGGQHVNKTDSAVRI 262

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWG-- 309
           TH+PTG+VV    E+SQH+N+A+A  +L+A+LYE   Q+RE + +   ES K+++G G  
Sbjct: 263 THLPTGIVV-TSSEKSQHQNRARAMKVLKARLYE---QQREALDSARAESRKSQVGSGDR 318

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             +IR+Y   P   V D R N+   + + V++G+ LDD ++  +A
Sbjct: 319 SERIRTYNF-PQGRVTDHRINLTLYNLAKVMEGEALDDVIEPLIA 362


>gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
 gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
          Length = 360

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 155/243 (63%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K    L+
Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAELKRWRVEVLSENESEQGGFKEIIALV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ SD RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L +   Q++
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQ---QEQ 283

Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +++A    ++ +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++
Sbjct: 284 DKLAQEQADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQ 342

Query: 349 ATL 351
             +
Sbjct: 343 PII 345


>gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           L20]
 gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 333

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/279 (39%), Positives = 169/279 (60%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  +    ++ +   K E+E  +Q   +L    D ND   A+LE+ AG GG E+  +A 
Sbjct: 43  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 102

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+  
Sbjct: 103 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 162

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI
Sbjct: 163 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 222

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E ++  + A   ++ +  +G G    +I
Sbjct: 223 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 280

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V++G +D+ ++  +
Sbjct: 281 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 318


>gi|283785500|ref|YP_003365365.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
 gi|282948954|emb|CBG88557.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
          Length = 360

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + +++GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAETRRWRVEIMSMNEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 VV 345


>gi|255323257|ref|ZP_05364392.1| peptide chain release factor 1 [Campylobacter showae RM3277]
 gi|255299780|gb|EET79062.1| peptide chain release factor 1 [Campylobacter showae RM3277]
          Length = 355

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 172/309 (55%), Gaps = 20/309 (6%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLELALEEDDCSILQET 88
           DP +  ++     L +E+ +L++  S  K     L D   N  LL      DD  + +  
Sbjct: 22  DPSITNDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALL------DDAELGELA 75

Query: 89  SDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRW 144
            D L+ ++ + E  + E  +L    D ND    +LE+ AG GG E+  +A  L   YTR+
Sbjct: 76  KDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFNAYTRY 135

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+   +S  R HT
Sbjct: 136 AELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQGRVHT 195

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ + P V+DS EIEI+ +D RID  R+SG GGQ VNTTDSAVRITHIPTG+VV  Q
Sbjct: 196 SAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVTNQ 254

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQ 321
             +SQHKNK  A  +L+A+LY  E+Q+ E +A      K+++G G    +IR+Y   P  
Sbjct: 255 DGKSQHKNKEAAMKVLKARLY--EIQEEERLAKETSERKSQVGTGDRSGRIRTYNF-PQN 311

Query: 322 MVKDLRTNI 330
            + D R N+
Sbjct: 312 RISDHRINL 320


>gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638]
 gi|166977363|sp|A4WBC6|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp.
           638]
          Length = 360

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 164/279 (58%), Gaps = 10/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + LQ  K   E   +Q + LL      D  +A++EV AG GG E+  +A 
Sbjct: 70  DDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R+++ E +  ++GE  G K     I G   YG LK E G HR+ R+  
Sbjct: 130 DLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVPA 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P V ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+RITH+
Sbjct: 190 TESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312
           PTG+VV+CQ ERSQHKNKA+A ++L +++   E+ KR++      + +  +G G +    
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQAE--ASTRRNLLGSGDRSDRN 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      ++++G LD  ++  +
Sbjct: 308 RTYNF-PQGRVTDHRINLTIYRLDEIMEGKLDSLIEPIV 345


>gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
 gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
          Length = 355

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 188/337 (55%), Gaps = 11/337 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  DP +  +        +    L+  ++  +E +D +       EL    DD  ++
Sbjct: 15  LEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDEAEELLAAGDDEELV 74

Query: 86  QETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141
           +   + L+ +K ++E Y++  ++L   +D ND     +E+  GAGG E+  +A +L RMY
Sbjct: 75  EMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAGGDEAALFAGVLFRMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+AE R ++ E ++ +  E  G K     I G + Y  +K E GVHR+ R+   +S  R
Sbjct: 135 LRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESGVHRVQRVPETESQGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS  ++ V P  ++ +++EI+ +D R+DTYRA GAGGQ+VN T+SAVRITHIPTG+V 
Sbjct: 195 VHTSTVTVAVLPEAEE-VDVEINPADLRVDTYRAGGAGGQYVNKTESAVRITHIPTGIVA 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
           QCQ E+SQ KN+ +   +LRA++  LE  + E+ A   E  K+++G G    +IR+Y   
Sbjct: 254 QCQDEKSQLKNREKCMRVLRARI--LEQAQEEQRAATAEDRKSQVGTGDRSERIRTYNY- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   V D R  +       +++GDLD+ + A +  K+
Sbjct: 311 PQGRVTDHRIGLTLHKLDSIVNGDLDELLGALITAKQ 347


>gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217]
 gi|119361603|sp|Q12QR8|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           denitrificans OS217]
          Length = 361

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 179/314 (57%), Gaps = 7/314 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E   L++ +   K  Q    D     E+ L+EDD  + +   + ++  K  +E  
Sbjct: 36  RALSKEYSQLEDVVKSFKAFQQAQLDLASAKEM-LQEDDAEMREMAQEEMKAAKKVIEQL 94

Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + E  +L    D ND   A+LE+ AGAGG E+  +A  L RMY+R+ E  K++ E + ++
Sbjct: 95  EDELQILLLPKDPNDDTNAFLEIRAGAGGDEAAIFAGDLFRMYSRFCEANKWQVEVMNVN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           + +  G K   + + G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++
Sbjct: 155 EADLGGFKEIIVKVSGEGVYGKLKYESGGHRVQRVPETESQGRVHTSACTVVVLHEVPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             I I+ +D ++DT+RASGAGGQHVN TDSA+RITHIP+G++V+CQ +RSQHKN+AQA +
Sbjct: 215 EAISINPADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L A++  +E +KR         S    G    +IR+Y   P   V D R N+     ++
Sbjct: 275 VLAARIQAIEDEKRRSAEETTRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTLYRLNE 333

Query: 338 VLDGDLDDFMKATL 351
           +++GDL+  ++  +
Sbjct: 334 IMEGDLNALLEPIM 347


>gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 352

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 179/307 (58%), Gaps = 17/307 (5%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
           Q L  A + + E +  + D   + +LA EE     L+ET   L+R   +V   Q   L  
Sbjct: 47  QALKKARADMAEAEAMMADP-DMKDLAAEE--YYALKETLPGLER---DV---QLMLLPK 97

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            EAD  +A LEV AG GG E+  +A  L RMY R+A  R ++ E +++++    G+K A+
Sbjct: 98  DEADEKNAILEVRAGTGGEEAALFAAELFRMYERYASVRGWRFEVMDVNETGIGGMKEAS 157

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G   +  LK E GVHR+ R+   +S  R HTS +++ + P  ++ ++I+I + D R
Sbjct: 158 ATITGRGVFARLKFESGVHRVQRVPATESGGRIHTSAATVAIMPEAEE-VDIQIDDKDLR 216

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            D YR+ G+GGQ VNTTDSAVR+THIPTG+ V CQQE+SQHKNKA A  +LRA+LYE+E 
Sbjct: 217 FDVYRSQGSGGQSVNTTDSAVRVTHIPTGLAVACQQEKSQHKNKATAMKLLRARLYEME- 275

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345
            +  + A    + K+++G G    +IR+Y   P   V D R N+      D+++G  LD+
Sbjct: 276 -RASKAAERAANRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDDMMNGTALDE 333

Query: 346 FMKATLA 352
              A +A
Sbjct: 334 VADALIA 340


>gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
 gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
          Length = 362

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 173/287 (60%), Gaps = 14/287 (4%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  + E+A EE     ++E+  N+ R++ E+   Q   +     D  + ++E+ AGAGG
Sbjct: 72  DDPEMREMAQEE-----VKESKANILRLEDEL---QVLLIPKDPNDDRNCFVEIRAGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE+R ++ E +  +  E+ G K     + G  AYG LK E G 
Sbjct: 124 DEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILKFESGG 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P + ++   EI+  D +IDT+R+SGAGGQHVNTTD
Sbjct: 184 HRVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A    + +  +G
Sbjct: 244 SAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRRNLLG 301

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +     ++V++GDLD  ++  +
Sbjct: 302 SGDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDSLIQPVI 347


>gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
 gi|156866495|gb|EDO59867.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
          Length = 358

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 178/291 (61%), Gaps = 20/291 (6%)

Query: 71  ILLELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123
           +L E  LE+D   +    L+E  ++L++I  E++      +L    D ND     +E+  
Sbjct: 64  LLAEGGLEKDFREMVELELEEARESLEKISEELK------ILLLPKDPNDDRNVIVEIRG 117

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  ++  L RMY+ +AE +++KTE L  ++ E  G K  + +I G  AY  +K 
Sbjct: 118 GAGGEEAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKY 177

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   ++  R HTS  ++ V P  +D +E+EI+ SD +IDT+R+ GAGGQH+
Sbjct: 178 ESGVHRVQRVPETETQGRIHTSTVTVAVLPEAED-VEVEINPSDLKIDTFRSGGAGGQHI 236

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITH+PTG+VV+CQ ERSQ+KNK +A  +L+++L E E +K++    + +  K
Sbjct: 237 NKTDSAIRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQN--EVAQERK 294

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +++G G    +IR+Y   P   + D R  +      DV++G+LD+ + A +
Sbjct: 295 SQVGTGDRSERIRTYNF-PQGRLTDHRIGLTLYRLEDVMNGNLDEVIDALI 344


>gi|89054297|ref|YP_509748.1| peptide chain release factor 1 [Jannaschia sp. CCS1]
 gi|119361551|sp|Q28RD9|RF1_JANSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88863846|gb|ABD54723.1| bacterial peptide chain release factor 1 (bRF-1) [Jannaschia sp.
           CCS1]
          Length = 354

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/253 (42%), Positives = 154/253 (60%), Gaps = 8/253 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    AD+  A +E+  G GG E+  +A  LLRMYTR+AE R ++ E +++ + + 
Sbjct: 95  QLALLPKDAADAKPAMIEIRPGTGGDEAALFAGDLLRMYTRYAEARGWRLEIVDLQESDL 154

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            GIK  T  ++G N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I+
Sbjct: 155 GGIKECTARVEGENVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDID 213

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT RASGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+  A   LR 
Sbjct: 214 IPATDIRIDTMRASGAGGQHVNTTDSAVRITHVPSGIVV-VSSEKSQHRNREIAMQTLRT 272

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +LY+LE QK ++   +    K +IG G    +IR+Y   P   + D R N+       V+
Sbjct: 273 RLYDLERQKADD--AMAADRKAQIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAVM 329

Query: 340 DGDLDDFMKATLA 352
            GDLD+ + A  A
Sbjct: 330 LGDLDEIVDALTA 342


>gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
          Length = 362

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 190/348 (54%), Gaps = 38/348 (10%)

Query: 12  GLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G    +N  + LS  +++ +E   LWQ   +A+    ++Q   +A+  I E  D     +
Sbjct: 27  GTISDNNKFRELSMEHSELSEITSLWQRYRQAET---DKQ---DALEMINEASDPEMKAM 80

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127
           +  E+    DD + ++E  + +   K                D ND   A+LE+ AG GG
Sbjct: 81  MQEEIDSAADDIAAMEEELNVMMLPK----------------DPNDKVPAFLEIRAGTGG 124

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  ++  L RMY R+A  + +  E L  ++GE  G K     + G + YG LK E G 
Sbjct: 125 DEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIITRVSGNDVYGRLKFESGA 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P V     +E++ +D R+DT+R+SGAGGQHVNTTD
Sbjct: 185 HRVQRVPETESQGRVHTSACTVAVMPEVKIDDTVELNPADIRMDTFRSSGAGGQHVNTTD 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN------IGES 301
           SAVR+THIPTGVV +CQQERSQHKN+A+A  ML A++ + ++Q++ + A+      +G  
Sbjct: 245 SAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRNLVGSG 304

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            ++E     +IR+Y   P   + D R N+       +++GDLD+ + A
Sbjct: 305 DRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLDELLDA 346


>gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
 gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
          Length = 358

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/343 (37%), Positives = 189/343 (55%), Gaps = 32/343 (9%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCD--NLI------LLE 74
           L  K  DP +  ++ E + L R+   L+  +      ++++D + +   L+      L E
Sbjct: 17  LEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYRRYRQVRDEIAEAKELVGGGDHELAE 76

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           LA  E     L+E    L +I+   E  +   L     D  D  +E+ AG GG E+  +A
Sbjct: 77  LAKME-----LEEKEPLLGKIE---EQLRVALLPKDPNDEKDVIMEIRAGTGGDEASLFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+  +K E ++ ++ E  G K   L I G   Y  LK E GVHR+ R+ 
Sbjct: 129 ADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGVYSQLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V PV DD I+IEI   D +IDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 189 ATEAGGRIHTSAATVVVMPVADD-IDIEIRPEDLKIDTYRSSGAGGQHVNMTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSKTEIGW 308
           +PTG+VV CQ ERSQ KN+A+A  +L+ +LY+ E++K+      E    IG   ++E   
Sbjct: 248 LPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQRSAESAERKGMIGSGDRSE--- 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       ++DGDL + +KA +
Sbjct: 305 --RIRTYNY-PQNRVTDHRIGLTLYKLEYMMDGDLYEMIKALV 344


>gi|968930|gb|AAC43437.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|317499018|ref|ZP_07957299.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|291560728|emb|CBL39528.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SSC/2]
 gi|316893668|gb|EFV15869.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 357

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/358 (36%), Positives = 195/358 (54%), Gaps = 32/358 (8%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  +  V RL  +  +  DP +  N    + LM+E+  L   +   KE +     + D
Sbjct: 1   MFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIED 60

Query: 69  NLILLE---------LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           +L+LLE         LA EE     L E+  N++R++ E+   +   +     D  +  +
Sbjct: 61  SLMLLEEESDEEMKELAKEE-----LNESKANVERLEEEL---KILLIPKDPMDDKNIIV 112

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AGAGG E+  +   + RMY  +AE +++K   L  ++    G K    ++ G  AY 
Sbjct: 113 EMRAGAGGDEAGLFVADVARMYRNYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYS 172

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
             K E GVHR+ RI   +S  R HTS  ++ + P V+D +E+EI  +DC+ D +RASG G
Sbjct: 173 RFKYESGVHRVQRIPATESGGRIHTSTITVAIMPEVED-VEVEIDMNDCKFDVFRASGNG 231

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIAN 297
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A  +LR++LYELE QK   EE A 
Sbjct: 232 GQCVNTTDSAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDEEAA- 290

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                K++IG G    +IR+Y   P   V D R  +       +++GDLD+ + +  A
Sbjct: 291 ---KRKSQIGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTA 344


>gi|163867491|ref|YP_001608690.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
 gi|189039959|sp|A9IMM3|RF1_BART1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161017137|emb|CAK00695.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
          Length = 358

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A +E+ AG GG+E+  ++  L RMY R+A    +K E + + +GE  G K     
Sbjct: 107 ADEKSAIVEIRAGTGGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ RI   ++  R HTS +++ V P  ++ I+I+I   D RID
Sbjct: 167 ISGKGVFSKLKYESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIDIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +    S K+++G G    +IR+Y   P   V D R N+       +L+GDLD+ + 
Sbjct: 285 VE--SERSASRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDEIIH 341

Query: 349 ATLA 352
           A ++
Sbjct: 342 ALIS 345


>gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9]
 gi|61214628|sp|Q6LNB4|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum
           SS9]
          Length = 362

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 173/287 (60%), Gaps = 14/287 (4%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  + E+A EE     ++E+  N+ R++ E+   Q   +     D  + ++E+ AGAGG
Sbjct: 72  DDPEMREMAQEE-----VKESKANILRLEDEL---QVLLIPKDPNDDRNCFVEIRAGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE+R ++ E +  +  E+ G K     + G  AYG LK E G 
Sbjct: 124 DEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLKFESGG 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTD
Sbjct: 184 HRVQRVPATESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A    + +  +G
Sbjct: 244 SAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRH--AEEASTRRNLLG 301

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +     ++V++GD+D  ++  +
Sbjct: 302 SGDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDMDSLIQPVI 347


>gi|194332966|ref|YP_002014826.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
 gi|238693294|sp|B4S385|RF1_PROA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194310784|gb|ACF45179.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
          Length = 357

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/241 (43%), Positives = 154/241 (63%), Gaps = 4/241 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSAT 169
           EADS +  +E+ AG GG E+  +A  LLRMY R+AE+R +K E LE ++    G  K A+
Sbjct: 104 EADSRNVIMEIRAGTGGDEAALFATDLLRMYQRFAERRGWKCELLEFNEANTPGACKEAS 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + I G + YG +K E GVHR+ R+   ++  R HTS +S+ V P  ++ ++IEI + D R
Sbjct: 164 MAISGHDVYGIMKFESGVHRVQRVPETETQGRIHTSAASVAVLPEAEE-VDIEIRKDDLR 222

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +DT+R+ G GGQ+VN  ++AVRITH P+G+VV CQ+ERSQ +N+ +A  MLRAKLY+ EL
Sbjct: 223 VDTFRSGGKGGQNVNKVETAVRITHAPSGIVVACQEERSQLQNRERAMKMLRAKLYDREL 282

Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             K +E A++ +S  +      +IR+Y   P   V D R      +   +LDG+LDD ++
Sbjct: 283 ADKNKERADLRKSMVSSGDRSAKIRTYNF-PQSRVTDHRIGYTSHALPQILDGNLDDLIE 341

Query: 349 A 349
           A
Sbjct: 342 A 342


>gi|291460253|ref|ZP_06599643.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291417200|gb|EFE90919.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 360

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 177/322 (54%), Gaps = 11/322 (3%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P L  ++   + L+RE+  L+         +         LEL  +E D  +L+   + L
Sbjct: 24  PELSNDIARYRKLIREQSELEPLYKTYLAFRKAEESERDALELLQKEKDPELLEMAKEEL 83

Query: 93  QRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           Q  K E     E  +   L   E D  +  +E+  GAGG E+  +A  L RMY  +AE+R
Sbjct: 84  QNAKEEQSLLGEKLRLLLLPKDENDDKNIVMEIRGGAGGEEAALFAAELYRMYMSYAERR 143

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F+TE +  H+    G+K    ++ G  AY  LK E GVHR+ R+   +S  R HTS ++
Sbjct: 144 GFRTELVSFHETGLGGLKEVIFIVDGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTAT 203

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P   + +E+EI  SD R++ +R+SGAGGQH+N T SAVR+ HIP+G+V +CQ+ERS
Sbjct: 204 VAVMPEAGE-VEVEIKPSDVRMEVFRSSGAGGQHINKTSSAVRLIHIPSGMVAECQEERS 262

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325
           Q +N+ +A  +LRA+LYE+E +KR E +      ++++G G    +IR+Y   P   V D
Sbjct: 263 QLQNREKAMRLLRARLYEIESRKRHEES--AAEKRSQLGTGERSEKIRTYNF-PQGRVTD 319

Query: 326 LRTNIEKTSPSDVLDGDLDDFM 347
            R  +      ++L GDLD  +
Sbjct: 320 HRIKLSLYCLEEILGGDLDPLI 341


>gi|167766740|ref|ZP_02438793.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
 gi|167711494|gb|EDS22073.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
          Length = 366

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/358 (36%), Positives = 195/358 (54%), Gaps = 32/358 (8%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  +  V RL  +  +  DP +  N    + LM+E+  L   +   KE +     + D
Sbjct: 10  MFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIED 69

Query: 69  NLILLE---------LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           +L+LLE         LA EE     L E+  N++R++ E+   +   +     D  +  +
Sbjct: 70  SLMLLEEESDEEMKELAKEE-----LNESKANVERLEEEL---KILLIPKDPMDDKNIIV 121

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AGAGG E+  +   + RMY  +AE +++K   L  ++    G K    ++ G  AY 
Sbjct: 122 EMRAGAGGDEAGLFVADVARMYRSYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYS 181

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
             K E GVHR+ RI   +S  R HTS  ++ + P V+D +E+EI  +DC+ D +RASG G
Sbjct: 182 RFKYESGVHRVQRIPATESGGRIHTSTITVAIMPEVED-VEVEIDMNDCKFDVFRASGNG 240

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIAN 297
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A  +LR++LYELE QK   EE A 
Sbjct: 241 GQCVNTTDSAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDEEAA- 299

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                K++IG G    +IR+Y   P   V D R  +       +++GDLD+ + +  A
Sbjct: 300 ---KRKSQIGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTA 353


>gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
 gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
          Length = 358

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREVQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
 gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
          Length = 362

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/319 (36%), Positives = 182/319 (57%), Gaps = 11/319 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   + 
Sbjct: 25  DPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMAKEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKDAKETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 KGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++ + E  KR   A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARIIQAEEAKR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDL 343
           D R N+     ++V++GD+
Sbjct: 321 DHRINLTVYRLNEVMEGDV 339


>gi|291612728|ref|YP_003522885.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
 gi|291582840|gb|ADE10498.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
          Length = 360

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 147/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  + RMY R+AE+R+++ E +    GE  G K     I
Sbjct: 107 DERNVFLEVRAGTGGDEAAIFAGDIFRMYVRFAERRRWQVEIISESPGEMGGYKEVIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ + P  D+  E+E++ ++ RIDT
Sbjct: 167 IGQGAYSVLKFESGAHRVQRVPATETQGRIHTSACTVAILPEADEVGEVELNPAELRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG VV+CQ  RSQH+NKAQA  +L A++   + Q++
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGTVVECQDGRSQHQNKAQAMRVLAARIK--DKQEQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  + I    K+ +G G    +IR+Y   P   V D R N+       ++DGD+ +   A
Sbjct: 285 EAHSKIAAERKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKMDQIMDGDISELTNA 343

Query: 350 TLA 352
            +A
Sbjct: 344 LMA 346


>gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
 gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
          Length = 360

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 10/241 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+++AEKR+++ E +     E+ G K     I
Sbjct: 109 DDKNVFLEIRAGTGGDEAAIFSGDLFRMYSKYAEKRRWQVEIVSESRSEQGGYKEVIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ + P  D   E+ I+++D R+DT
Sbjct: 169 VGQGVYSQLKFESGAHRVQRVPETESQGRVHTSACTVAIMPEADAQAEVAINKADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L A+L   +    
Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRARAMSLLAARLQSAQ---- 284

Query: 293 EEIA--NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +++A   + +  K  +G G    +IR+Y   P   V D R N+     ++V++GDLDD +
Sbjct: 285 DDVAAKEMADERKNLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYRLNEVMEGDLDDVV 343

Query: 348 K 348
           +
Sbjct: 344 Q 344


>gi|303228461|ref|ZP_07315294.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303230754|ref|ZP_07317501.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514514|gb|EFL56509.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302516963|gb|EFL58872.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 360

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 186/332 (56%), Gaps = 12/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81
           L  +  DP +     E + L R+   L   +   +E +  L      +E+     ++E+ 
Sbjct: 16  LEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGIDEAMEVIEDKTMDEEF 75

Query: 82  CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + QE    L+  K E+E K Q   L     D  +  +E+  GAGG E+  +A  L RM
Sbjct: 76  REMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+   ++  
Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFESGVHRVQRVPATETQG 195

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P ++D ++IEI++ D +IDTYRASGAGGQH+N T+SAVRITH+PTG+V
Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEINDKDLKIDTYRASGAGGQHINKTESAVRITHLPTGIV 254

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ +RSQ +N+ +A  +LRAKL +   Q  E  A++    K+++G G    +IR+Y  
Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDKAEQ--EATASMAADRKSQVGTGDRSERIRTYNY 312

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            P   V D R N+       +L+GDLD+ ++A
Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343


>gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 361

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 187/328 (57%), Gaps = 14/328 (4%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETS 89
           P + Q+V   + L RE + L       +E   +Q  L +   LL+ + E++   + QE  
Sbjct: 27  PEVIQDVKRYRELSREHKELAELYETYQEYKRLQRELNEAKELLK-SPEKELKELAQEEI 85

Query: 90  DNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           +++Q RI    E  +   +     DS +  LE+ AG GG E+  +   LLRMY ++AE +
Sbjct: 86  EDIQSRIPELEEKLKLLLVPKDPNDSKNVILEIRAGTGGEEAALFVADLLRMYQKYAEDK 145

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K   L  +     G K    LI+G  AY  LK E GVHR+ RI   +S  R HTS ++
Sbjct: 146 GWKFSILNANKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQRIPVTESGGRIHTSTAT 205

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P  D++ ++EI+  D +I+T+RASGAGGQ+VNTT++AVRITH PTG+VV CQ ERS
Sbjct: 206 VAVLPEADEA-DVEINPQDLKIETFRASGAGGQYVNTTETAVRITHTPTGIVVSCQDERS 264

Query: 269 QHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           Q +NK +A  +L AKL +  E +KREEIA      K ++G G    +IR+Y   P   V 
Sbjct: 265 QFQNKQKALKILYAKLKDFYERKKREEIAR---ERKEQVGTGERSEKIRTYNF-PQNRVT 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           D R N+     +DVL+G LD+F+ A  A
Sbjct: 321 DHRVNLTLYKLNDVLEGKLDEFIDALRA 348


>gi|317401193|gb|EFV81839.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54]
          Length = 360

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/342 (36%), Positives = 187/342 (54%), Gaps = 19/342 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLILLELA 76
            RL  ++    +P    ++   + L RER  L+  +    +F++  +D     L   +  
Sbjct: 14  HRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEED-----LATAQEM 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDW 133
           L + +   + E      R+KLE      + LL    D ND    +LE+ AG GG ES  +
Sbjct: 69  LADPELKAMAEDEIKSGRVKLESLEAALQLLLLPR-DPNDGRSVFLEIRAGTGGDESALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           +  LLRMYTR+AE+R ++ E +     E  G K     I+G  AYG LK E G HR+ R+
Sbjct: 128 SGDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIEGDGAYGRLKFESGAHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ +    D+  EI I+ SD RIDT+RASGAGGQH+N TDSAVRIT
Sbjct: 188 PATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQHINKTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ +RSQH+NK +A  +L A+L + E ++R+  +      K+ IG G    
Sbjct: 248 HLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDL++   A +A
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 346


>gi|325204648|gb|ADZ00102.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355]
          Length = 358

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITNALIA 346


>gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424]
 gi|238692779|sp|B3R722|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG
           19424]
          Length = 360

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 186/348 (53%), Gaps = 21/348 (6%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDN 69
           L   D   +RL  +N          N+ + + L RE   L       S  ++ QD L   
Sbjct: 6   LAKLDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQDDLATA 65

Query: 70  LILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124
             LL      DD  +    +D +   R +LE      + LL  + D ND     LE+ AG
Sbjct: 66  QALL------DDPEMKDFAADEIAAARDRLEALQASLQRLLLPK-DPNDDRNLLLEIRAG 118

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG ES  +A  LLRMYTR+AE+++++ E +   + +  G K   + I G  A+  LK E
Sbjct: 119 TGGEESALFAADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLKFE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQHVN
Sbjct: 179 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVN 238

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A++   ++Q R   A    + + 
Sbjct: 239 KTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIK--DMQTRAAQAREASTRRN 296

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            IG G    +IR+Y   P   V D R N+       ++DGD+D+ + A
Sbjct: 297 LIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSA 343


>gi|77460969|ref|YP_350476.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf0-1]
 gi|119361582|sp|Q3K6W9|RF1_PSEPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77384972|gb|ABA76485.1| peptide chain release factor RF-1 [Pseudomonas fluorescens Pf0-1]
          Length = 360

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/243 (44%), Positives = 148/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  G K     I
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSA+RITHIPTG VV+CQ+ERSQHKN+A+A   L AKL   + Q  
Sbjct: 229 YRSSGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLN--DQQTA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                I    K  +G G    +IR+Y     + V D R N+   S  ++L G ++  ++ 
Sbjct: 287 AAANAIASERKLLVGSGDRSERIRTYNFAQGR-VTDHRVNLTLYSLDEILAGGVEAVIEP 345

Query: 350 TLA 352
            LA
Sbjct: 346 LLA 348


>gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166223599|sp|A1AX02|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 363

 Score =  192 bits (489), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/291 (38%), Positives = 172/291 (59%), Gaps = 10/291 (3%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE---SLLSGEA-DSNDAYLEVHAG 124
           NL   +L L EDD  I     + +  +K ++++   E   SLL  +  DS +  +E+ AG
Sbjct: 61  NLEDAKLMLLEDDMDIKAMAKEEMLDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +++ L +MY+R+ EK+K++ E +    GE  G K     I G   Y  LK E
Sbjct: 121 TGGNEASIFSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS  +I + P V++  E+ I+ SD R+DT+RASGAGGQHVN
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITHIPTG V +CQ  RSQHKNKAQA  +L ++++  +LQ++E+      + K 
Sbjct: 241 KTNSAVRITHIPTGTVAECQDGRSQHKNKAQALLVLASRIF--DLQQQEQHKEQASTRKE 298

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            IG G   ++IR+Y   P   + D R N+     S++++G+L+  ++  + 
Sbjct: 299 LIGSGDRSQRIRTYNY-PQGRITDHRINLTLYKLSEIMEGNLNAIIEPLIV 348


>gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
 gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
          Length = 360

 Score =  192 bits (489), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 165/272 (60%), Gaps = 11/272 (4%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           ++   D + R++LE++    + LL  +  D  + +LE+ AG GG ES  +A  LLRMY R
Sbjct: 82  IRSARDRMARLELELQ----KMLLPKDPNDDRNIFLEIRAGTGGDESALFAGDLLRMYLR 137

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+   ++  R H
Sbjct: 138 FAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIH 197

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+THIPTG+VV+C
Sbjct: 198 TSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIPTGIVVEC 257

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G    +IR+Y   P 
Sbjct: 258 QDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQ 314

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             + D R N+       ++DGDLD+ + A ++
Sbjct: 315 GRMTDHRINLTLYRLEAIMDGDLDELIGALVS 346


>gi|262279542|ref|ZP_06057327.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259893|gb|EEY78626.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 362

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|299769517|ref|YP_003731543.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
 gi|298699605|gb|ADI90170.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
          Length = 362

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|260598215|ref|YP_003210786.1| peptide chain release factor 1 [Cronobacter turicensis z3032]
 gi|260217392|emb|CBA31449.1| Peptide chain release factor 1 [Cronobacter turicensis z3032]
          Length = 360

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +AY+EV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAYVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|156933676|ref|YP_001437592.1| peptide chain release factor 1 [Cronobacter sakazakii ATCC BAA-894]
 gi|166223556|sp|A7MKC1|RF1_ENTS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156531930|gb|ABU76756.1| hypothetical protein ESA_01498 [Cronobacter sakazakii ATCC BAA-894]
          Length = 360

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++EV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|161870534|ref|YP_001599706.1| peptide chain release factor 1 [Neisseria meningitidis 053442]
 gi|189039981|sp|A9M1Q8|RF1_NEIM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161596087|gb|ABX73747.1| peptide chain release factor I [Neisseria meningitidis 053442]
          Length = 358

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD]
 gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
 gi|122324144|sp|Q0BIQ0|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689166|sp|B1YSD5|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           ambifaria AMMD]
 gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
          Length = 360

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/259 (42%), Positives = 159/259 (61%), Gaps = 9/259 (3%)

Query: 95  IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++LE E ++   LL  +  D  + +LE+ AGAGG ES  +A  LLRMY R+AE+++++ E
Sbjct: 90  VRLEAELQKM--LLPKDPNDDRNIFLEIRAGAGGDESALFAGDLLRMYLRFAERQRWQVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +     +  G K   + I G  AY  LK E G HR+ R+   ++  R HTS  ++ V P
Sbjct: 148 MMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK
Sbjct: 208 EADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNK 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A  +L A++   + Q  E+ A    + K+ IG G    +IR+Y   P   + D R N+
Sbjct: 268 DRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINL 324

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                  ++DGDLD+ + A
Sbjct: 325 TLYRLEALMDGDLDELIGA 343


>gi|119361546|sp|Q4QKS1|RF1_HAEI8 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   + +
Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 167 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 227 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 286 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|225027777|ref|ZP_03716969.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
 gi|224954923|gb|EEG36132.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
          Length = 359

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/351 (36%), Positives = 202/351 (57%), Gaps = 18/351 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ V+RL  +  +  +P +  +    + LM+E+  L   +   KE ++    + D
Sbjct: 1   MFDKLEDLVKRLDEVMQELSEPDVVSDQNRFRNLMKEQNELAPIVEKYKEYKEAKQTIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAG 124
           ++ +LE   +E+   +L+E    L   K  VE Y++   +L    D ND     +E+ AG
Sbjct: 61  SVEMLEEEHDEEMRELLKE---ELSEAKKNVEQYEEELKVLLLPKDPNDDKNVIVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  + RMY  +AE +++KTE +++++    G K  + +I G  AY  LK E
Sbjct: 118 AGGDEAALFAAEIYRMYKNYAESKRWKTEFIDVNENGIGGFKEVSFMINGQGAYSRLKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ RI   +S  R HTS  ++ + P  ++ +++++  +DCR D +RASG GGQ VN
Sbjct: 178 SGVHRVQRIPATESGGRIHTSTITVAIMPEAEE-VDVQLDMNDCRFDVFRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+THIPTG+V+ CQ E+SQ KNK +A  +LRA+LY+LE  K  +     E  K+
Sbjct: 237 TTDSAVRLTHIPTGIVISCQDEKSQLKNKDKAIKVLRARLYDLEQSKAHDAE--AELRKS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   V D R  +      D+L+GDLD+ + +  A
Sbjct: 295 QIGTGDRAEKIRTYNF-PQGRVTDHRIKLTLHRLDDILNGDLDEIIDSLTA 344


>gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
 gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
          Length = 361

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   + +
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   +  +  +G G    +IR+Y   P   V D R N+      +V++G +D+ ++ 
Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344

Query: 350 TL 351
            +
Sbjct: 345 II 346


>gi|262041834|ref|ZP_06015019.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040826|gb|EEW41912.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 360

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++EV AG GG E+  +A  L RMYTR+AE R+++ E L  ++GE  G K     I
Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338


>gi|152970781|ref|YP_001335890.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895295|ref|YP_002920030.1| peptide chain release factor 1 [Klebsiella pneumoniae NTUH-K2044]
 gi|330009867|ref|ZP_08306623.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
 gi|166223565|sp|A6TAN9|RF1_KLEP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150955630|gb|ABR77660.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238547612|dbj|BAH63963.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328534693|gb|EGF61258.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
          Length = 360

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++EV AG GG E+  +A  L RMYTR+AE R+++ E L  ++GE  G K     I
Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338


>gi|169795523|ref|YP_001713316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213158536|ref|YP_002319834.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|215483010|ref|YP_002325215.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332850713|ref|ZP_08432960.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332866986|ref|ZP_08437303.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
 gi|226739095|sp|B7H0L9|RF1_ACIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739096|sp|B7IBA1|RF1_ACIB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688120|sp|B0V7E0|RF1_ACIBY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169148450|emb|CAM86316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213057696|gb|ACJ42598.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|213989032|gb|ACJ59331.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332730550|gb|EGJ61866.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332734315|gb|EGJ65443.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
          Length = 362

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|299144121|ref|ZP_07037201.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518606|gb|EFI42345.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 356

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +E+ AGAGG E+  +A +L R Y R+AE+  +K E +  ++    G K    +I
Sbjct: 106 DSKNVIVEIRAGAGGDEAALFAGVLFRQYVRFAERMGWKVEIMSTNEIGIGGYKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S+ R HTS +++ V P  +D +EI+I  SD + D 
Sbjct: 166 LGRGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAED-VEIDIEPSDIKFDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ +NK +A  +L+ KLY+L+LQ  
Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLRNKEKAMKILKTKLYDLKLQ-- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A +    K++IG G    +IR+Y   P   V D R  +       ++DGDLD+ + A
Sbjct: 283 EQNAELSMQKKSQIGTGDRSERIRTYNY-PQGRVTDHRIGLTLHKIDSIVDGDLDEIIDA 341

Query: 350 TLA 352
            +A
Sbjct: 342 LIA 344


>gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400]
 gi|119361518|sp|Q13TU2|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           xenovorans LB400]
          Length = 360

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|296159488|ref|ZP_06842312.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
 gi|295890196|gb|EFG69990.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
          Length = 356

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G K   + I
Sbjct: 103 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 163 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 223 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 281 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 339

Query: 350 TLA 352
            ++
Sbjct: 340 LVS 342


>gi|317052432|ref|YP_004113548.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
 gi|316947516|gb|ADU66992.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
          Length = 355

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 152/238 (63%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  LE+ AG GG E+  +A  L RMY+R+A++R +K E L +++    G +    +I
Sbjct: 106 DTKNIILEIRAGTGGEEAALFATDLFRMYSRYADERGWKVEVLSVNETGNGGFREIISMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S+ R HTS  ++ V P  ++ ++I+I+ +D RID 
Sbjct: 166 EGRNVYSRLKFESGTHRVQRVPQTESSGRIHTSAVTVAVLPEAEE-VDIDINPADLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVR+THIPTGV V CQ+ RSQHKNK +A ++LR++L +  +Q+ 
Sbjct: 225 YRSSGAGGQHVNTTDSAVRVTHIPTGVSVACQEGRSQHKNKEKALSILRSRLLDHAVQQS 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +  +   +  K ++G G    +IR+Y   P   V D R N+       VL+GDLD+ +
Sbjct: 285 D--SQRSQDRKLQVGSGDRSERIRTYNF-PQGRVTDHRVNLTLHRLEQVLEGDLDEVI 339


>gi|169633250|ref|YP_001706986.1| peptide chain release factor 1 [Acinetobacter baumannii SDF]
 gi|184158674|ref|YP_001847013.1| peptide chain release factor 1 [Acinetobacter baumannii ACICU]
 gi|239501457|ref|ZP_04660767.1| peptide chain release factor 1 [Acinetobacter baumannii AB900]
 gi|260554585|ref|ZP_05826806.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|332874369|ref|ZP_08442280.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
 gi|238685536|sp|A3M6N7|RF1_ACIBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688133|sp|B0VM26|RF1_ACIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690970|sp|B2HU82|RF1_ACIBC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169152042|emb|CAP00926.1| peptide chain release factor 1 [Acinetobacter baumannii]
 gi|183210268|gb|ACC57666.1| Protein chain release factor A [Acinetobacter baumannii ACICU]
 gi|193077723|gb|ABO12581.2| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
 gi|260411127|gb|EEX04424.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|322507515|gb|ADX02969.1| prfA [Acinetobacter baumannii 1656-2]
 gi|323518589|gb|ADX92970.1| peptide chain release factor 1 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737448|gb|EGJ68364.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
          Length = 362

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|94496666|ref|ZP_01303242.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
 gi|94424026|gb|EAT09051.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
          Length = 361

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 178/306 (58%), Gaps = 14/306 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELAL--EEDDCSILQETSDNLQRIKLEVEYK 102
           L +E   ++   +  +E++ RL   L  LE+    EE D ++     + +Q +K ++   
Sbjct: 35  LSKEYAEIEPVAAAARELR-RLRQELAALEMMTGGEEADPAMRDMAQEEMQLLKSQLPAA 93

Query: 103 Q----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           +     + L    AD+  A LE+ AG GG E+  +A  L RMY R+A+ + +K E L  +
Sbjct: 94  ERALALQLLPRDAADARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADTQGWKMEMLSAN 153

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
             E+ G K     I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ 
Sbjct: 154 ASEQGGFKEVVASINGAGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEE- 212

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           ++++I+++D +ID YRASGAGGQHVNTTDSAVRITH+PTG+VV  Q ERSQHKNKA+A  
Sbjct: 213 VDVQIADADLKIDIYRASGAGGQHVNTTDSAVRITHVPTGIVVTQQDERSQHKNKAKAMQ 272

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +LRA+LYE E ++R +    G + K  +G G    +IR+Y   P   V D R N+     
Sbjct: 273 VLRARLYEAE-RERTQNEQAG-ARKAMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRL 329

Query: 336 SDVLDG 341
            ++L+G
Sbjct: 330 PEILEG 335


>gi|328952115|ref|YP_004369449.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
 gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
          Length = 357

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 189/337 (56%), Gaps = 17/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--DRLCDN-LILLELALEEDDC 82
           L  +  +P   +N    +   RE   L   I   ++ Q  +R CDN   LL+    E D 
Sbjct: 16  LEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECDNNQALLKT---ETDE 72

Query: 83  SILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138
            I +   + +Q++K  +E+ + E   L    D NDA    LE+ AG GG E+  +A  L 
Sbjct: 73  EIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGTGGEEAALFAAELF 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+AE+  +K E L  +     G+K    LI G   Y  LK E GVHR+ R+   +S
Sbjct: 133 RMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYESGVHRVQRVPTTES 192

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P  +D ++++IS  + RID +R+SG GGQ VNTTDSAVRITH+PTG
Sbjct: 193 QGRIHTSAVTVAILPEAED-VDVQISPEELRIDVFRSSGPGGQSVNTTDSAVRITHLPTG 251

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV CQ E+SQHKNKA+A  +L+A+L  L+++++E+   + +  K+++G G    +IR+Y
Sbjct: 252 MVVTCQDEKSQHKNKAKALKVLQARL--LDIKQQEQHQKMAQDRKSQVGSGDRSERIRTY 309

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R  +        L+G LD+ + A ++
Sbjct: 310 NF-PQGRVTDHRLGLTLYRLEAFLEGGLDELLDALVS 345


>gi|254671653|emb|CBA09383.1| peptide chain release factor 1 [Neisseria meningitidis alpha153]
          Length = 372

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 114 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 173

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 174 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 233

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 234 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 293

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 294 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 350

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 351 LAEITDALIA 360


>gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
 gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
          Length = 357

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 159/243 (65%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  + + LLRMY+ +A+ + +KTE +E+++    GIK A +LI
Sbjct: 107 DEKNVILEIRAGTGGEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  A+  LK E GVHR+ R+   +S+ R HTS +++ V P +DD +E++++ +D R+D 
Sbjct: 167 KGKGAFSRLKYESGVHRVQRVPTTESSGRVHTSAATVAVLPEMDD-VEVDLNPNDVRVDV 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVR+TH PTG+VV CQ E+SQ KNK +A+ +L+++LY L+++  
Sbjct: 226 YRSSGNGGQSVNTTDSAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKME-- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   + +  K+++G G    +IR+Y   P   V D R  +      + ++GD+D+ ++ 
Sbjct: 284 EQNKQLSDERKSQVGSGDRSERIRTYNF-PQGRVSDHRIGLTIYKLDNFMNGDIDEVIEG 342

Query: 350 TLA 352
            + 
Sbjct: 343 LIT 345


>gi|260549389|ref|ZP_05823608.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
 gi|260407498|gb|EEX00972.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
          Length = 362

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|293609440|ref|ZP_06691742.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827892|gb|EFF86255.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122703|gb|ADY82226.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2]
          Length = 362

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|170696251|ref|ZP_02887383.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
 gi|170138811|gb|EDT07007.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
          Length = 360

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELISA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|288574777|ref|ZP_06393134.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570518|gb|EFC92075.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 358

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/329 (36%), Positives = 186/329 (56%), Gaps = 14/329 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K  DP +  N  E + L ++   L   +   +E + R+   L   +  L+ DD  + Q  
Sbjct: 20  KMADPSVTSNPKELQSLGKKHAELSEIVEAYEEYK-RIRSELEEAKALLDSDDPEMAQLA 78

Query: 89  SDNLQRIK--LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143
            + +  ++  LE + K+  +LL    D ND     +E+ AG GG E+  +A+ L RMY+R
Sbjct: 79  KEEVHSLEPLLEEQEKKV-TLLLLPKDPNDDKSVMVEIRAGTGGDEAALFASDLFRMYSR 137

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE+R++  E L+ ++ E  G K     + G  AY  LK E GVHR+ R+   +S  R H
Sbjct: 138 FAEQRRWSVEILDANETEIGGYKEIVFKVDGQGAYSDLKYESGVHRVQRVPATESGGRIH 197

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++  ++E+ + D +IDTYR+SGAGGQHVN TDSAVRITH+PTG+VV C
Sbjct: 198 TSAATVAVLPEAEE-FDVEVRQEDLKIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVTC 256

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q ERSQ KN+A+A   LR KLY++E +KR++     +  K +IG G    +IR+Y   P 
Sbjct: 257 QDERSQIKNRARAMAFLRTKLYDMEQRKRQDAE--AQERKGQIGSGDRSERIRTYNF-PQ 313

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             + D R  +        + G + + ++A
Sbjct: 314 NRITDHRIGLTLYKLDAAMGGSITELVEA 342


>gi|329296264|ref|ZP_08253600.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 360

 Score =  192 bits (488), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    ++EV AG GG E+  +A  L RMY+R+AE R+++ E +  +DGE  G K     I
Sbjct: 107 DERPCFIEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWQVEIMSANDGEHGGYKEVIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG +K E G HR+ R+   +S  R HTS  ++ V P + ++   +I+  D +IDT
Sbjct: 167 TGDGAYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVMPKLPEAELPDINPGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    + +  +G G    +IR+Y   P   V D R N+      + ++G LD  ++ 
Sbjct: 287 Q--AAEASTRRNLLGSGDSSDRIRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDTLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|147567|gb|AAA24519.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTT SA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTGSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|126642199|ref|YP_001085183.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
          Length = 296

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 41  DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 100

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 101 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 160

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 161 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 220

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 221 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 275


>gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
 gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
          Length = 361

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/338 (35%), Positives = 183/338 (54%), Gaps = 23/338 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R   ++    D     N    + L RE   L+  ++  K  Q    D++   +L L +
Sbjct: 13  VERHEEVSALLSDAETISNQERFRELSREYSELEEVVATFKRYQT-AKDDMEAAQLMLLD 71

Query: 80  DDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           DD  + +   + L   K     LE+E ++   L     DS + +LE+ AG GG E+  ++
Sbjct: 72  DDPDMREMAEEELDAAKEAIEALEIELQRL-LLPKDPKDSANVFLEIRAGTGGDEAAIFS 130

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+ K++ E L    GE  G K     ++G + Y  LK E G HR+ R+ 
Sbjct: 131 GDLFRMYSRYAERMKWRLEVLSERAGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQRVP 190

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V     +   IEI+++D R+DT+RASGAGGQHVN TDSA+RITH
Sbjct: 191 ETESQGRIHTSACTVAVMAEAAEVDAIEINKADIRVDTFRASGAGGQHVNKTDSAIRITH 250

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKL--------YELELQKREEIANIGESSKTEI 306
           +PTG+VV+CQ ERSQHKN+A+A ++L+AKL           + Q+R  +   G+ S    
Sbjct: 251 LPTGIVVECQDERSQHKNRARAMSLLQAKLDTAAEEKAASEQAQERRNLVGTGDRSD--- 307

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +IR+Y   P   + D R N+      ++++GDLD
Sbjct: 308 ----RIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDLD 340


>gi|325267755|ref|ZP_08134406.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
 gi|324980879|gb|EGC16540.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
          Length = 358

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++TE +  ++ +  G K   + +
Sbjct: 107 DDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQTEIVSANESDLGGYKEVIVRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE+++ D RIDT
Sbjct: 167 VGLGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NK +A  +L A+L   ++QKR
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLN--DMQKR 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD+++   A
Sbjct: 285 EAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAA 343

Query: 350 TLA 352
            +A
Sbjct: 344 LMA 346


>gi|187925494|ref|YP_001897136.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
 gi|238689472|sp|B2SZ27|RF1_BURPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187716688|gb|ACD17912.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
          Length = 360

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|290475215|ref|YP_003468101.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
 gi|289174534|emb|CBJ81328.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
          Length = 360

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +IS  D +IDT
Sbjct: 167 SGDQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPDISPGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEMHKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E        +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QEAE--ASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 II 345


>gi|254472406|ref|ZP_05085806.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
 gi|211958689|gb|EEA93889.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
          Length = 357

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/224 (46%), Positives = 143/224 (63%), Gaps = 9/224 (4%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +ADS+D  LEV AG GG E+  +A  L RMY R+A+   +K E +   +G+  G K    
Sbjct: 104 KADSHDVILEVRAGTGGDEAALFAGDLFRMYQRFADNNGWKVEVMSSSEGDMGGFKEIVA 163

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G   +G LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I+ +D RI
Sbjct: 164 AVTGQEVFGKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPQAEE-VDVDINPADLRI 222

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYRASGAGGQHVNTTDSAVRITH PTG+VV  Q ERSQHKNK +A  +LRAK+Y++E  
Sbjct: 223 DTYRASGAGGQHVNTTDSAVRITHNPTGIVVAVQDERSQHKNKDRAMKLLRAKIYDVE-- 280

Query: 291 KREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            RE  AN   E+ + ++G G    +IR+Y   P   V D R  +
Sbjct: 281 -RERAANERTEARRVQVGSGDRSERIRTYNF-PQGRVTDHRIGL 322


>gi|304570793|ref|YP_002516272.2| peptide chain release factor 1 [Caulobacter crescentus NA1000]
 gi|22096040|sp|Q9A9V5|RF1_CAUCR RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 356

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/288 (41%), Positives = 174/288 (60%), Gaps = 15/288 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTE 129
           EL +   D  + +   D +Q +  KL V  ++   +L+  + D N  A LEV AG GG E
Sbjct: 60  ELDVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDE 119

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A+ + ++ E   I +GE  G K     I G   +G LK E GVHR
Sbjct: 120 AALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHR 179

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P  +D +EIEI ESD RIDTYR+SGAGGQHVN TDSA
Sbjct: 180 VQRVPATEAQGRIHTSAATVAVLPEAED-VEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 238

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308
           VRITH+PTGVVV    E+SQH+N+A+A   L+A+LY+++   RE + +   E+ K+++G 
Sbjct: 239 VRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALDSARSEARKSQVGS 294

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           G    +IR+Y   P   V D R N+   + + +++GD LDD +   +A
Sbjct: 295 GDRSERIRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIA 341


>gi|320538900|ref|ZP_08038576.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
 gi|320031060|gb|EFW13063.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
          Length = 361

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DEGGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWRVEMISANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P V ++   +I++SD +IDT
Sbjct: 167 SGEGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEVPEAEMPDITQSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V+ G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMAGKLD 338


>gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
 gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
          Length = 358

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 194/346 (56%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L+   ++++  +L+E S +L+    E+E ++ + LL      D  D  +E+ A AG
Sbjct: 61  IEEMLKETSDKEEVDMLKEESASLKAELPEME-EELKILLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +       +++G+LD+ + A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDA 340


>gi|42560702|ref|NP_975153.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|61214633|sp|Q6MU89|RF1_MYCMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42492198|emb|CAE76795.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|301320433|gb|ADK69076.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 364

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/284 (40%), Positives = 163/284 (57%), Gaps = 17/284 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           L+ELA  E     L E +D ++ ++  +E    E LL  +  D  +  +E+   AGG E+
Sbjct: 77  LIELAKIE-----LDENNDKVEHLQQVIE----EMLLPKDPNDDKNVIVEIRGAAGGDEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+
Sbjct: 128 NIFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 188 QRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAV 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q  RSQH NK  A  MLR K+YE E++K++  A    + K  +G G 
Sbjct: 247 RITHLPTGIVVTSQDGRSQHDNKDIAMTMLRTKVYEAEVEKQQ--AQADATRKNAVGTGA 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   V D R  +       V++G++D+F+ A +
Sbjct: 305 RSEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347


>gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea sp. MED297]
 gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297]
          Length = 361

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 144/242 (59%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  ++  L RMY+R+AEK  ++ E L   +GE  G K     +
Sbjct: 109 DHKNVYLEVRAGTGGDEAAIFSGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRL 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI ++D R+DT
Sbjct: 169 SGERVYSQLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+R+TH+PTG+VV+CQ ERSQHKNKA+A ++L AKL   + Q+ 
Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHLPTGIVVECQDERSQHKNKARAMSLLAAKLK--DAQES 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                  +  K+ +G G    +IR+Y   P   V D R N+      +V+ G LD  ++ 
Sbjct: 287 AAAREQADQRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVIGGQLDHIIQP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|119477466|ref|ZP_01617657.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
 gi|119449392|gb|EAW30631.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
          Length = 361

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 150/241 (62%), Gaps = 12/241 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS++ +LE+ AG GG E+  ++  L RMYTR+AE + +K E +    G+  G K     +
Sbjct: 109 DSHNVFLEIRAGTGGDEAAIFSGDLFRMYTRYAENKGWKIEIISERSGDHGGYKELISRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS  ++ + P VD   E+EI++SD RIDT
Sbjct: 169 SGQDVYAHLKFESGAHRVQRVPETESQGRVHTSACTVAIMPEVDSVDEVEINKSDLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------E 286
           +RASGAGGQHVN TDSA+RITHIP+G+VV+CQ ERSQHKNKA+A ++L+++L       +
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHIPSGLVVECQDERSQHKNKARAMSLLQSRLLTGIQDKQ 288

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            + Q  E  + +G   ++E     +IR+Y   P   V D R N+     ++V++G L D 
Sbjct: 289 QQEQSDERRSLVGSGDRSE-----RIRTYNY-PQGRVTDHRINLTLYKLAEVMEGALGDV 342

Query: 347 M 347
           +
Sbjct: 343 I 343


>gi|254674224|emb|CBA10008.1| peptide chain release factor 1 [Neisseria meningitidis alpha275]
          Length = 358

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/243 (44%), Positives = 147/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I
Sbjct: 107 DDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++  D RIDT
Sbjct: 167 IGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L   + QKR
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN--DAQKR 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K+ IG G    +IR+Y   P   V D R N+       V+DGDL +   A
Sbjct: 285 EAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDA 343

Query: 350 TLA 352
            +A
Sbjct: 344 LIA 346


>gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
 gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
          Length = 357

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/351 (36%), Positives = 199/351 (56%), Gaps = 18/351 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  ++ + R   L ++ ++P +  N    + LM+E+  L   +   KE +     + D
Sbjct: 1   MFDKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124
           +L++LE   +E+   +     D L   K  VE  + E  +L    D ND     +E+ AG
Sbjct: 61  SLLMLEEESDEEMREL---AKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  + RMY  +AE R++KTE + I +    G K    +I G  AY  LK E
Sbjct: 118 AGGDEAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ + P  ++ +++ I E D RID  RASG GGQ VN
Sbjct: 178 SGVHRVQRVPETESGGRIHTSTVTVAIMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LE++K++  A+  E+ ++
Sbjct: 237 TTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQ--ASEAEARRS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   V D R  +       VL+GDLD+ + + +A
Sbjct: 295 QIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIA 344


>gi|226946181|ref|YP_002801254.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
 gi|259585215|sp|C1DEV0|RF1_AZOVD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226721108|gb|ACO80279.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
          Length = 360

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/249 (42%), Positives = 154/249 (61%), Gaps = 15/249 (6%)

Query: 113 DSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D NDA   +LE+ AG GG E+  +A  L RMY+R+AEK+ ++ E L  + GE  G K   
Sbjct: 106 DPNDARNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRIEILSENPGEHGGYKEII 165

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             ++G N YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ ++ R
Sbjct: 166 TRVEGDNVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPAELR 225

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +DTYR+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A   L AK     L
Sbjct: 226 VDTYRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAK-----L 280

Query: 290 QKREEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           Q R++ A    I E+ +  +G G    +IR+Y   P   V + R N+   +  +V+ G +
Sbjct: 281 QDRQDAAAHREISETRRLLVGSGDRSERIRTYNF-PQGRVTEHRINLTLYALDEVMAGGV 339

Query: 344 DDFMKATLA 352
           +  ++  L+
Sbjct: 340 EAVIEPLLS 348


>gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
 gi|259585256|sp|C5BSZ6|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
          Length = 360

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 189/340 (55%), Gaps = 11/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+R   +     DP +  +  + + L +E   L+  +   +E +  + +N+   ++
Sbjct: 9   LENLVERYDEVGALLGDPDIIADQKKFRDLGKEYSELEPVVICYQEYRT-VIENIAEAKM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
            + + D  + +   + L+  + ++E    Q + LL      D  + +LE+ AG GG E+ 
Sbjct: 68  LMNDGDADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+  ++ E +  + GE  G K     + G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  D+S E+E+++ D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV+CQ ERSQHKN+A+A ++L A++     Q  +  A      K+ +G G  
Sbjct: 248 ITHIPTGIVVECQDERSQHKNRAKAMSLLAARIN--SAQAEQFAAEQASERKSLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +IR+Y   P   V D R N+      ++++G LD+ ++
Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYKLDEIMEGSLDEVIQ 344


>gi|121603686|ref|YP_981015.1| peptide chain release factor 1 [Polaromonas naphthalenivorans CJ2]
 gi|166223585|sp|A1VKB6|RF1_POLNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120592655|gb|ABM36094.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas
           naphthalenivorans CJ2]
          Length = 373

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 148/246 (60%), Gaps = 12/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D   A++E+ AG GG ES  +A  L R+YTR+AE+++++ E +     E  G K   L I
Sbjct: 111 DRRAAFIEIRAGTGGDESALFAGDLFRLYTRFAERKRWQVEIISESPSELGGYKEVVLRI 170

Query: 173 KGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            GP        YG L+ E G HR+ R+   ++  R HTS  ++ V P  D+++ I+I+ +
Sbjct: 171 DGPTDAMGVGVYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDETVAIQINPA 230

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+V +CQ+ RSQH NKAQA  +L A+++E
Sbjct: 231 DLRIDTYRASGAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHGNKAQAMKVLTARIHE 290

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            E  +  + A      K  IG G    +IR+Y   P   + D R N+       +++GDL
Sbjct: 291 KE--RSAQAAKDAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDL 347

Query: 344 DDFMKA 349
           DD + A
Sbjct: 348 DDVVTA 353


>gi|261821677|ref|YP_003259783.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
 gi|261605690|gb|ACX88176.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
          Length = 360

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVVSASEGEHGGYKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G    +IR+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343

Query: 350 TL 351
            +
Sbjct: 344 VV 345


>gi|114327270|ref|YP_744427.1| peptide chain release factor 1 [Granulibacter bethesdensis CGDNIH1]
 gi|119361545|sp|Q0BUJ8|RF1_GRABC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114315444|gb|ABI61504.1| bacterial peptide chain release factor 1 (RF-1) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 352

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/281 (40%), Positives = 164/281 (58%), Gaps = 17/281 (6%)

Query: 77  LEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           L E +  IL+E   +L R I++ +       L   EAD   A LE+   AGG E+  +A 
Sbjct: 72  LAESEAEILREKLPSLTREIRIAL-------LPKDEADERSAILEIRPAAGGDEASLFAA 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L  MY R+AE R ++ E LE  D    G+K     I G + +  LK E GVHR+ R+  
Sbjct: 125 QLFSMYQRYAEIRGWRFEILEYDDTGLGGLKGGMAEITGRSVFARLKYESGVHRVQRVPA 184

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P  +D +++++ E D RID YRASGAGGQHVN T+SAVRITH+
Sbjct: 185 TESQGRIHTSTVTVAVLPEAED-VDVQVDEGDLRIDVYRASGAGGQHVNKTESAVRITHL 243

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWG---RQ 311
           P+G+VV  Q+E+SQHKN+A+A  +L+A+LYE   Q+R  + A+     + ++G G    +
Sbjct: 244 PSGIVVAMQEEKSQHKNRAKAMKILKARLYE---QQRAALHASRAADRRAQVGTGDRSER 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+ G+LDDF+ A  A
Sbjct: 301 IRTYNF-PQGRVSDHRINLTLYKIDRVMLGELDDFVDALTA 340


>gi|71909299|ref|YP_286886.1| peptide chain release factor 1 [Dechloromonas aromatica RCB]
 gi|119361530|sp|Q479R5|RF1_DECAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71848920|gb|AAZ48416.1| bacterial peptide chain release factor 1 (bRF-1) [Dechloromonas
           aromatica RCB]
          Length = 360

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AG GG ES  +A  L RMY+R+AE+++++ E +   + E  G +     I
Sbjct: 107 DERSVLLEIRAGTGGDESALFAGSLFRMYSRFAERQRWQVEVMSASESELGGYREIICRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P VD+  ++ ++ +D RIDT
Sbjct: 167 AGNGAYSRLKFESGGHRVQRVPETETQGRIHTSACTVAVMPEVDEVEDVNLNPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+V +CQ  RSQH NKA A  +L A++   ++Q R
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVAECQDGRSQHANKASALKVLAARIK--DVQVR 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A+I  + K+ IG G    +IR+Y   P   + D R N+     + ++DGD+D+ + A
Sbjct: 285 AQQAHISSTRKSLIGSGDRSERIRTYNF-PQGRITDHRINLTLYKIAAIMDGDMDELLGA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|296533064|ref|ZP_06895708.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
 gi|296266608|gb|EFH12589.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
          Length = 351

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 7/244 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+   AGG E+  +A  L   Y ++A  R ++   L+  + E  GIK A   
Sbjct: 100 ADAGSAILEIRPAAGGDEAGLFAAELFAAYQKYAAARGWRFGVLDYDESELGGIKGAVAE 159

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G   +  LK E GVHR+ R+   ++  R HTS  ++ V P  +D ++++I+ESD RID
Sbjct: 160 VEGQGVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPQAED-VDVQINESDLRID 218

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQHVN TDSAVRITHIPTG VV  Q+ERSQHKN+A+A  +LRA+LY  E Q+
Sbjct: 219 TYRASGAGGQHVNKTDSAVRITHIPTGTVVAMQEERSQHKNRAKAMKVLRARLY--EAQR 276

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            + +A+     + ++G G    +IR+Y   P   V D R  +       V+ G++DD + 
Sbjct: 277 SQAVASRSADRRAQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKIDRVMQGEMDDIID 335

Query: 349 ATLA 352
           A +A
Sbjct: 336 ALIA 339


>gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
 gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
          Length = 356

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/344 (38%), Positives = 189/344 (54%), Gaps = 30/344 (8%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELA------ 76
           L  K  DP +     E   L +E   L+  ++     KE+  +L +N  LLE A      
Sbjct: 15  LTKKIADPEIIARQEEWIGLTKEHASLEEIVTNFREYKEVLKQLEENSELLEDAAGDIEM 74

Query: 77  --LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQ 131
             L + +   L+E    LQ        +Q   LL  + D ND     +E+ AG GG E+ 
Sbjct: 75  EQLIKSELEALEEKKSKLQ--------EQLRILLLPQ-DPNDDRNVIMEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ +K E ++ +  E  G K     I G  AY  LK E GVHR+ 
Sbjct: 126 LFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++IEI+  D RID YRASG GGQ VNTTDSAVR
Sbjct: 186 RVPSTEAGGRIHTSAATVAVLPEAHE-VDIEINPDDLRIDIYRASGHGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ ERSQ KNK +A  +LRA+L  LE  + E+   I ++ ++++G G  
Sbjct: 245 ITHIPTGLVVTCQDERSQLKNKDKAMKVLRARL--LEKVQEEQEREIAQNRRSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+     ++VL G+LD+ + A +A
Sbjct: 303 SERIRTYNF-PQGRITDHRINLTTHQLTNVLQGELDELIDALVA 345


>gi|223039191|ref|ZP_03609481.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
 gi|222879552|gb|EEF14643.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
          Length = 355

 Score =  192 bits (487), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/310 (39%), Positives = 172/310 (55%), Gaps = 22/310 (7%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLELA----LEEDDCSI 84
           DP +  ++     L +E+ +L++  S  K     L D   N  LL+ A    L +D+   
Sbjct: 22  DPSITSDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALLDDAELGELAKDELKN 81

Query: 85  LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+   +NL+  IK+ +       L     D  + +LE+ AG GG E+  +A  L   Y R
Sbjct: 82  LESQKENLEEEIKILL-------LPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFNAYAR 134

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+   +S  R H
Sbjct: 135 YAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQGRVH 194

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ + P V+DS EIEI+ +D RID  R+SG GGQ VNTTDSAVRITHIPTG+VV  
Sbjct: 195 TSAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVTN 253

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPY 320
           Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A      K+++G G    +IR+Y   P 
Sbjct: 254 QDGKSQHKNKEAAMKVLKARLY--EIQEEERVAKETSERKSQVGTGDRSGRIRTYNF-PQ 310

Query: 321 QMVKDLRTNI 330
             + D R N+
Sbjct: 311 NRISDHRINL 320


>gi|49473852|ref|YP_031894.1| peptide chain release factor 1 [Bartonella quintana str. Toulouse]
 gi|61214617|sp|Q6G0R0|RF1_BARQU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49239355|emb|CAF25688.1| Peptide chain release factor 1 [Bartonella quintana str. Toulouse]
          Length = 359

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 180/306 (58%), Gaps = 20/306 (6%)

Query: 54  NAISF-IKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           NA+S  I E++  + D L  +E+  L +++   L +  + L+        K+ + LL  +
Sbjct: 53  NALSIEITELETIISDKLTDVEMRNLAQEELPPLFQKMEKLE--------KELQILLLPK 104

Query: 112 --ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
              D   A +E+ AG GG+E+  +   L RMY R+A    +K E + +++GE  G K   
Sbjct: 105 DITDEKSAIIEIRAGTGGSEAALFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEII 164

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G   +  LK E GVHR+ R+   +++ R HTS +++ V P  ++ I+IEI   D R
Sbjct: 165 ATISGKGVFSKLKFESGVHRVQRVPETETSGRIHTSAATVAVLPEAEE-IDIEIRPEDIR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E 
Sbjct: 224 IDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIEQ 282

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +K E  +    S K ++G G    +IR+Y   P   V D R N+       +L+GDLD+ 
Sbjct: 283 KKAE--SERSASRKNQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDEL 339

Query: 347 MKATLA 352
           + A ++
Sbjct: 340 INALIS 345


>gi|119897272|ref|YP_932485.1| peptide chain release factor 1 [Azoarcus sp. BH72]
 gi|166223529|sp|A1K443|RF1_AZOSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119669685|emb|CAL93598.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 361

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 102/240 (42%), Positives = 149/240 (62%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  LLRMY+R+AE+++++ E +  +  +  G K     I
Sbjct: 107 DERNLFLEIRAGTGGDEAALFAGDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   ++  R HTS  ++ V P  D+   +EI+ +D RIDT
Sbjct: 167 VGAGAYSRLKFESGGHRVQRIPVTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NKAQA  +L A+L + +L+ R
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRAR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +       + ++ IG G    +IR+Y   P   V D R N+       V+ G+LD+ + A
Sbjct: 287 QSAE--AATRRSLIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDAVMQGELDELLAA 343


>gi|307731136|ref|YP_003908360.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
 gi|307585671|gb|ADN59069.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
          Length = 360

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
 gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
          Length = 360

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/272 (40%), Positives = 161/272 (59%), Gaps = 10/272 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + LQ  K   E   +Q + LL      D  +A++EV AG GG E+  +A 
Sbjct: 70  DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R+++ E L  ++GE  G K     I G   YG LK E G HR+ R+  
Sbjct: 130 DLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312
           PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G +    
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAE--ASTRRNLLGSGDRSDRN 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           R+Y   P   V D R N+      + ++G LD
Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|300920409|ref|ZP_07136843.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
 gi|300412542|gb|EFJ95852.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
          Length = 360

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +G   G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRGEIMSASEGGHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
 gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
          Length = 360

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 158/272 (58%), Gaps = 10/272 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   D L+  K + E    + Q   L     D  +A+LEV AG GG E+  +A 
Sbjct: 70  DDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+  
Sbjct: 130 DLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQRVPA 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312
           PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ +R++        +  +G G +    
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAE--ASERRNLLGSGDRSDRN 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           R+Y   P   V D R N+      + ++G LD
Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338


>gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 362

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 146/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     I
Sbjct: 107 DANAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P VD    +EI+ +D RIDT
Sbjct: 167 DGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIP+GVVV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|293395774|ref|ZP_06640056.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
 gi|291421711|gb|EFE94958.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
          Length = 361

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERSCFLEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P V ++   EI+  D +IDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338


>gi|241890031|ref|ZP_04777329.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
 gi|241863653|gb|EER68037.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
          Length = 362

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 195/339 (57%), Gaps = 17/339 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKEIQD---RLCDNLILLE 74
           +R   LN    DP +   V + K LM   +E++ ++  ++  +E +D   ++ D   LLE
Sbjct: 12  ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKELLE 68

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
           +  +++   ++QE    L+     +E +    LL  +  D  +  +EV   AGG E+Q +
Sbjct: 69  IEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K E G HR+ R+
Sbjct: 129 AGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S+ R HTS +++ V P  ++ IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR+T
Sbjct: 189 PTTESSGRIHTSTATVVVLPEAEE-IEIDINENDIRVDTFASSGAGGQSVNTTMSAVRLT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTGVVV  Q ERSQ KNK +A  +LRA++Y+   Q  EE A      K+++G G    
Sbjct: 248 HIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   V D R  +       +++G LD+ ++A
Sbjct: 306 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343


>gi|300690281|ref|YP_003751276.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
 gi|299077341|emb|CBJ49966.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
          Length = 356

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AGAGG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 103 DHRNIFLEIRAGAGGDESALFAGDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARL 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 223 FRASGAGGQHINKTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDAIMDGDLDELLGA 339

Query: 350 TLA 352
             A
Sbjct: 340 LAA 342


>gi|283832855|ref|ZP_06352596.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
 gi|291071455|gb|EFE09564.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ +R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARR 286

Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++     E+S+    +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQ----AEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338


>gi|167470794|ref|ZP_02335498.1| peptide chain release factor 1 [Yersinia pestis FV-1]
          Length = 303

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/181 (49%), Positives = 123/181 (67%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     I
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 E 293
           +
Sbjct: 287 Q 287


>gi|254497857|ref|ZP_05110623.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
 gi|254352935|gb|EET11704.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
          Length = 351

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/285 (40%), Positives = 166/285 (58%), Gaps = 14/285 (4%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHA 123
           +NL  L+  L  DD  +     D L+  + ++    E  Q+  +     D  + YLEV A
Sbjct: 49  NNLASLQEMLAGDDQELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLEVRA 108

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK 
Sbjct: 109 GTGGDEAAIFAGDLYRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQLKF 168

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ V P V++  +I+I+  D RIDTYR+SGAGGQHV
Sbjct: 169 ESGAHRVQRVPDTESQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGGQHV 228

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIANIGES 301
           N TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E   QK+E+     ++
Sbjct: 229 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQ----AQT 284

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            K+ +G G    +IR+Y   P   + D R N+      DV++G+L
Sbjct: 285 RKSLVGSGDRSERIRTYNY-PQGRLTDHRINLTIYQLGDVMEGNL 328


>gi|317133626|ref|YP_004092940.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
 gi|315471605|gb|ADU28209.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
          Length = 356

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 179/310 (57%), Gaps = 12/310 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQ 103
           LMRE + L   +      Q    D +   EL LE  D  +    ++ L   + E E  +Q
Sbjct: 34  LMREHKQLTPLVEAYHAYQQATADEMEAREL-LENGDADLRALAAEELADARAEKERLEQ 92

Query: 104 FESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
              LL    D ND     +E+ AGAGG E+  +A  L RMY+ +AE+R +K E L +++ 
Sbjct: 93  KLHLLLLPRDPNDEKNVIIEIRAGAGGEEAALFAAELFRMYSMYAERRGWKAETLNMNET 152

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G+K  + +++G  AY  LK E GVHR+ R+   ++  R HTS  ++ V P  +D +E
Sbjct: 153 ELGGMKEISCMVEGEGAYSRLKFESGVHRVQRVPETEAGGRIHTSTVTVAVLPEAED-VE 211

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I+  D RIDT+R+SGAGGQH+N T+SA+RITH+PTG+VV+CQ ERSQHKN+ +A  +L
Sbjct: 212 VDIAPEDLRIDTFRSSGAGGQHINKTESAIRITHLPTGLVVECQDERSQHKNRDRAMKVL 271

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           R++L +     ++E   I  + +T++G G    +IR+Y   P   V D R  +       
Sbjct: 272 RSRLLDRAQSAQDE--EIATTRRTQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYHLDA 328

Query: 338 VLDGDLDDFM 347
           VL G+LD+ +
Sbjct: 329 VLSGNLDEVI 338


>gi|90407674|ref|ZP_01215854.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
 gi|90311265|gb|EAS39370.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
          Length = 363

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/337 (35%), Positives = 186/337 (55%), Gaps = 7/337 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R   +     DP    +  + + L +E   L+  +   K  Q  + ++L   ++ LE+
Sbjct: 13  VERYEEVQALLGDPATLADQDKYRKLTKEYSQLEVVVLSFKGYQGAV-EDLESAKMMLED 71

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSND---AYLEVHAGAGGTESQDWAN 135
           DD  + +   + ++  K  +E    E  +     D ND    Y+E+ AGAGG E+  +A 
Sbjct: 72  DDPEMQEMAVEEVKEAKATLETLSSELEILLLPKDPNDDRNCYIEIRAGAGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+++ + +K++ E +  +  E+ G K     I+G  AYG +K E G HR+ R+  
Sbjct: 132 NLFRMYSKYIDSKKWRLEIMNTNASEQGGYKEVIAKIEGEGAYGIMKFESGGHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P V ++  I I+ +D ++DT+RASGAGGQHVN TDSAVR+THI
Sbjct: 192 TESQGRIHTSACTVVVMPEVPEAEAIVINPADLKVDTFRASGAGGQHVNKTDSAVRLTHI 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRS 314
           PTG VV+CQ +RSQHKN+AQA ++L+A+L + E +K      +   S    G    +IR+
Sbjct: 252 PTGTVVECQDQRSQHKNRAQAMSVLQARLQQAEDEKNHAEEQVIRRSLVASGDRSERIRT 311

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   V D R N+      D+L+G+LD  +   L
Sbjct: 312 YNY-PQGRVSDHRINLTLYCLHDILEGELDALLDPIL 347


>gi|330863233|emb|CBX73359.1| peptide chain release factor 1 [Yersinia enterocolitica W22703]
          Length = 330

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/182 (48%), Positives = 124/182 (68%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D +LE+ AG GG E+  +A  + RMY+R+AE R++K E +   +GE  G K     +
Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286

Query: 293 EE 294
           ++
Sbjct: 287 QQ 288


>gi|323527482|ref|YP_004229635.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
 gi|323384484|gb|ADX56575.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
          Length = 356

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G K   + I
Sbjct: 103 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 163 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 223 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 281 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGA 339

Query: 350 TLA 352
            ++
Sbjct: 340 LVS 342


>gi|317491752|ref|ZP_07950187.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920186|gb|EFV41510.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    YLE+ AG GG E+  +A  + RMY+R+AE R++K E +  ++GE  G K     +
Sbjct: 107 DERSCYLEIRAGTGGDEAALFAGDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+  D RIDT
Sbjct: 167 IGDGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 358

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++EV AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QK E  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKHEAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
 gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
          Length = 358

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/351 (37%), Positives = 190/351 (54%), Gaps = 33/351 (9%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLC 67
            +FD      +R   L T    P + Q+    +   +E   L   I+ ++E   +QD + 
Sbjct: 2   AMFDKMKETEERYRELETFLGQPEIIQDQKRFQKYAKEHSDLTPIITVLREHQALQDEIA 61

Query: 68  DNLILLE--------LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-- 117
           ++  LL+        LA EE     ++  +D L+R   E+      ++L    D ND   
Sbjct: 62  ESQSLLQDPDPEIKKLAKEE-----IEGLNDRLERTADEL------TVLLLPKDPNDEKN 110

Query: 118 -YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             LE+ AG GG E+  +A  L RMY+R+AE R++KTE L  +     G K   +LI+G  
Sbjct: 111 ILLEIRAGTGGEEAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLIEGHR 170

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  LK E GVHR+ R+   ++  R HTS  ++ V P  ++ +++EI   D RID YR+S
Sbjct: 171 VFSRLKYESGVHRVQRVPETEAQGRIHTSAVTVAVLPEAEE-VDVEIKPEDLRIDVYRSS 229

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVNTTDSAVRITH+PTG+VV CQ E+SQHKNKA+A  +LR+++ +LE   +   +
Sbjct: 230 GHGGQHVNTTDSAVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQH--S 287

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            I E  KT +G G    +IR+Y   P   V D R  +      D L GDL+
Sbjct: 288 RISEERKTMVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKLDDFLQGDLN 337


>gi|167759398|ref|ZP_02431525.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
 gi|167662955|gb|EDS07085.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
          Length = 356

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 205/349 (58%), Gaps = 14/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD  ++ + RL  + ++ ++P++  +    + LM+E+  L   +   KE    +  + D
Sbjct: 1   MFDKLEDLLIRLEEVLSELQEPNVANDQNRFRKLMKEQNELTPIVEAYKEYKACKQAIED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
           +L +LE   +E+   +  +E +D+  R++ E+E++    LL  +  D  +  +E+ AGAG
Sbjct: 61  SLQMLEEESDEEMRELAKEELNDSKARVE-ELEHELKILLLPKDPNDDKNVIVEIRAGAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  + RMY  +AE R++K E +E  +    G+K+ T +I G  AY  +K E G
Sbjct: 120 GDEAALFAAEIYRMYLHYAESRRWKVELVECEEIGIGGMKNVTFMINGKGAYSVMKYESG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P  +D ++I+I E D RID  RASG GGQ VNTT
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAED-VDIQIDEKDIRIDVMRASGNGGQCVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QKR +     E+ K++I
Sbjct: 239 DSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDMECQKRHDAE--AEARKSQI 296

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V D R  +       +++GD+ + + A +A
Sbjct: 297 GTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIA 344


>gi|323702617|ref|ZP_08114279.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532436|gb|EGB22313.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
          Length = 356

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 194/333 (58%), Gaps = 11/333 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALEEDDC 82
           L  +  DP +  +  + K L++    L   +      K+++  L ++ ++LE  LE D  
Sbjct: 15  LEGQISDPEIIADQAKWKQLVKAHADLTEVVDVFRQYKKVRSDLEESKLMLEEKLEPDFR 74

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +++   + L + K E+E K    LL  +  D  +  +E+  G GG E+  +A  L RMY
Sbjct: 75  EMVELEIEELSKRKEELEQKLKILLLPKDPNDEKNVIVEIRGGTGGEEAALFAGDLFRMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           +R+AE++ ++TE ++ ++ +  G K  T +++G  AY  LK E GVHR+ R+   +S  R
Sbjct: 135 SRFAERKGWRTEIIDANETDLGGFKEITFVVEGKGAYSTLKFESGVHRVQRVPATESGGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P  ++ ++IEI+ +D RID + ASG GGQ VNTT SAVRITHIPTG+VV
Sbjct: 195 IHTSAATVAVLPEAEE-VDIEINPNDIRIDLFCASGPGGQCVNTTQSAVRITHIPTGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQHKNK +A  +LRA+L  L+  ++E+   I  + K+ +G G    +IR+Y   
Sbjct: 254 SCQDEKSQHKNKDKAMRVLRARL--LDKAQQEQQQAIASTRKSMVGTGDRSERIRTYNF- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           P   V D R  +       VL+GDLD+ ++A +
Sbjct: 311 PQNRVTDHRIGLTLHRLDQVLEGDLDEIIEALI 343


>gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
 gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/244 (41%), Positives = 148/244 (60%), Gaps = 16/244 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + YLE+ AG GG E+  +A  L RMY R++E R ++ E +    GE  G K     I
Sbjct: 109 DSQNVYLEIRAGTGGDEAAIFAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E G HR+ R+   +S  R HTS  ++ + P  D   +IEI+++D R+DT
Sbjct: 169 QGDDIYAHLKFESGAHRVQRVPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-------- 284
           +R+SGAGGQHVNTTDSAVRITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL        
Sbjct: 229 FRSSGAGGQHVNTTDSAVRITHLPSGIVVECQDERSQHKNRARAMSLLQAKLASASEQQA 288

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
              + ++R  +   G+ S        +IR+Y   P   V D R N+      +V++GDLD
Sbjct: 289 AAEQAEERRNLVGTGDRSD-------RIRTYNF-PQGRVSDHRINLTLYKLDEVIEGDLD 340

Query: 345 DFMK 348
             ++
Sbjct: 341 ALIQ 344


>gi|205352556|ref|YP_002226357.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690491|sp|B5R924|RF1_SALG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|205272337|emb|CAR37217.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627616|gb|EGE33959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|229470350|sp|B2A3J0|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 357

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 157/246 (63%), Gaps = 7/246 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMYTR+AE   +KTE ++ H+ +  G K    +I
Sbjct: 107 DEKNVIVEIRAGAGGDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAY  LK E GVHR+ R+   +S+ R HTS +++ V P  +D +EIEI  ++ RIDT
Sbjct: 167 EGKNAYSRLKFESGVHRVQRVPSTESSGRIHTSTATVAVLPEAED-VEIEIDTNELRIDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + A+G GGQ VNTT SAVRITH PTGVVV CQ E+SQHKN+ +A  +LRA++Y++ L+++
Sbjct: 226 FCATGPGGQSVNTTQSAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYLEEQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++     E  K+++G G    +IR+Y   P   + D R N        VL+G++D+ + A
Sbjct: 286 QQQEA--EERKSQVGSGDRSERIRTYNF-PQGRITDHRINFTTHRLEQVLEGEIDELIDA 342

Query: 350 TLAIKK 355
            +  ++
Sbjct: 343 LITTEQ 348


>gi|220963008|gb|ACL94364.1| bacterial peptide chain Release factor 1 (RF-1) [Caulobacter
           crescentus NA1000]
          Length = 335

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/288 (41%), Positives = 174/288 (60%), Gaps = 15/288 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTE 129
           EL +   D  + +   D +Q +  KL V  ++   +L+  + D N  A LEV AG GG E
Sbjct: 39  ELDVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDE 98

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A+ + ++ E   I +GE  G K     I G   +G LK E GVHR
Sbjct: 99  AALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHR 158

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P  +D +EIEI ESD RIDTYR+SGAGGQHVN TDSA
Sbjct: 159 VQRVPATEAQGRIHTSAATVAVLPEAED-VEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 217

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308
           VRITH+PTGVVV    E+SQH+N+A+A   L+A+LY+++   RE + +   E+ K+++G 
Sbjct: 218 VRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALDSARSEARKSQVGS 273

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           G    +IR+Y   P   V D R N+   + + +++GD LDD +   +A
Sbjct: 274 GDRSERIRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIA 320


>gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189039988|sp|A9MPA1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205]
 gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205]
          Length = 362

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DANAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P VD    +EI+ +D RIDT
Sbjct: 167 DGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIP+GVVV+CQ+ERSQHKNKA+A  +L ++L   +    
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   +  E  +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341


>gi|16125109|ref|NP_419673.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
 gi|13422113|gb|AAK22841.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
          Length = 385

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/288 (41%), Positives = 174/288 (60%), Gaps = 15/288 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTE 129
           EL +   D  + +   D +Q +  KL V  ++   +L+  + D N  A LEV AG GG E
Sbjct: 89  ELDVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDE 148

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A+ + ++ E   I +GE  G K     I G   +G LK E GVHR
Sbjct: 149 AALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHR 208

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P  +D +EIEI ESD RIDTYR+SGAGGQHVN TDSA
Sbjct: 209 VQRVPATEAQGRIHTSAATVAVLPEAED-VEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 267

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308
           VRITH+PTGVVV    E+SQH+N+A+A   L+A+LY+++   RE + +   E+ K+++G 
Sbjct: 268 VRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALDSARSEARKSQVGS 323

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           G    +IR+Y   P   V D R N+   + + +++GD LDD +   +A
Sbjct: 324 GDRSERIRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIA 370


>gi|15606216|ref|NP_213594.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
 gi|6225940|sp|O67032|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
          Length = 362

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/244 (44%), Positives = 154/244 (63%), Gaps = 9/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  LE+ AGAGG E+  +A  L RMY ++AE++ +K   L  +     G K    LI
Sbjct: 110 DTKNVILEIRAGAGGEEAALFAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S+ R HTS +++ V P VD++ +I+I   + +I+T
Sbjct: 170 EGEGAYSRLKYESGVHRVQRVPVTESSGRIHTSTATVAVLPEVDET-DIKIKPEELKIET 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           +RASGAGGQ+VNTT++AVRITHIPTG+VVQCQ ERSQ +NK +A  +L AKL +  E +K
Sbjct: 229 FRASGAGGQYVNTTETAVRITHIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKK 288

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +EEIA      K ++G G    +IR+Y   P   V D R N+      DVL+G LD+ + 
Sbjct: 289 QEEIAK---ERKEQVGTGERSEKIRTYNF-PQNRVTDHRINLTLYKLQDVLEGKLDEIID 344

Query: 349 ATLA 352
           A  A
Sbjct: 345 ALRA 348


>gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87]
 gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87]
          Length = 358

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 194/346 (56%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L+   ++++  +L+E S +L+    E+E ++ + LL      D  D  +E+ A AG
Sbjct: 61  IEEMLKETSDKEEVDMLKEESASLKAELPEME-EELKILLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    ++R+Y   P   V D R  +       +++G+LD+ + A
Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDA 340


>gi|329119839|ref|ZP_08248513.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327463995|gb|EGF10306.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 362

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/243 (43%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ +  G K   + +
Sbjct: 111 DDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESDLGGYKEVIVRL 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT
Sbjct: 171 IGLGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L   + QKR
Sbjct: 231 FRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN--DAQKR 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD+++   A
Sbjct: 289 EAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAA 347

Query: 350 TLA 352
            +A
Sbjct: 348 LIA 350


>gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|194736546|ref|YP_002114806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238689756|sp|B4TXU2|RF1_SALSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194712048|gb|ACF91269.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|322616772|gb|EFY13680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620418|gb|EFY17284.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625680|gb|EFY22499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626130|gb|EFY22940.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633737|gb|EFY30477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638891|gb|EFY35584.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640874|gb|EFY37523.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644095|gb|EFY40640.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649166|gb|EFY45604.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655325|gb|EFY51633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660917|gb|EFY57148.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662786|gb|EFY58993.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667970|gb|EFY64129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674268|gb|EFY70362.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678549|gb|EFY74607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683208|gb|EFY79224.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686902|gb|EFY82880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195208|gb|EFZ80388.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200201|gb|EFZ85287.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204529|gb|EFZ89533.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207354|gb|EFZ92302.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213949|gb|EFZ98718.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217339|gb|EGA02058.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219317|gb|EGA03806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323228020|gb|EGA12165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231361|gb|EGA15474.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235801|gb|EGA19880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240370|gb|EGA24413.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245262|gb|EGA29262.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323252824|gb|EGA36660.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323254893|gb|EGA38687.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261018|gb|EGA44613.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266735|gb|EGA50221.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323268942|gb|EGA52398.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
 gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|61214592|sp|Q62DF3|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223532|sp|A3MFT4|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223533|sp|A2RYL2|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223534|sp|A1UWC9|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL 
Sbjct: 10  DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69

Query: 77  LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               D S+       L+   D + R+  E+   Q   L     D  + ++E+ AG GG E
Sbjct: 70  A---DASMRDFAEDELRGARDRMGRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR
Sbjct: 124 SALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G
Sbjct: 244 VRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
 gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
          Length = 361

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/235 (44%), Positives = 145/235 (61%), Gaps = 7/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  LLRMY R+AE +++KTE L  H     G K    LI
Sbjct: 111 DEKNVVLEIRAGTGGDEAALFAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALI 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+ +E++I   + RID 
Sbjct: 171 TGRGAYSQLKYESGAHRVQRVPATESQGRVHTSAVTVAVLPEADE-VEVDIKPEELRIDY 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQHVNTTDSAVRITH+PTG+VV CQ E+SQHKNKA+A  +L A+L  LE  ++
Sbjct: 230 FRSSGPGGQHVNTTDSAVRITHLPTGLVVSCQDEKSQHKNKAKALKVLAARL--LEKMEQ 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           E+ A +  + ++++G G    +IR+Y   P   V D R  +      +VL G+L+
Sbjct: 288 EQQAALAANRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTIYKLEEVLVGELE 341


>gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL 
Sbjct: 10  DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69

Query: 77  LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               D S+       L+   D + R+  E+   Q   L     D  + ++E+ AG GG E
Sbjct: 70  A---DASMRDFAEDELRGARDRMSRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR
Sbjct: 124 SALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G
Sbjct: 244 VRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090]
 gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140]
 gi|240118391|ref|ZP_04732453.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|75432438|sp|Q5F750|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA
           1090]
 gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
          Length = 358

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R DT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREVQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|16760669|ref|NP_456286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16765117|ref|NP_460732.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29141572|ref|NP_804914.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62180340|ref|YP_216757.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161613728|ref|YP_001587693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168241358|ref|ZP_02666290.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168259999|ref|ZP_02681972.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168462748|ref|ZP_02696679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820514|ref|ZP_02832514.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443280|ref|YP_002041026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448370|ref|YP_002045819.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471193|ref|ZP_03077177.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197250213|ref|YP_002146253.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|198242115|ref|YP_002215369.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389390|ref|ZP_03216001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207856717|ref|YP_002243368.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213051786|ref|ZP_03344664.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213426495|ref|ZP_03359245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213617488|ref|ZP_03372314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213648795|ref|ZP_03378848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238913676|ref|ZP_04657513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289827376|ref|ZP_06545996.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|61230201|sp|P0A287|RF1_SALTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61230203|sp|P0A288|RF1_SALTI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75482992|sp|Q57NN5|RF1_SALCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039989|sp|A9MW04|RF1_SALPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690045|sp|B5F4H6|RF1_SALA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690378|sp|B5FU19|RF1_SALDC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690453|sp|B5R3J9|RF1_SALEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690683|sp|B4TKA4|RF1_SALHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693511|sp|B4SUG2|RF1_SALNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299687|pir||AB0720 peptide chain release factor 1 (RF-1) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154104|gb|AAA88611.1| release factor 1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420306|gb|AAL20691.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502965|emb|CAD02131.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137199|gb|AAO68763.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127973|gb|AAX65676.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161363092|gb|ABX66860.1| hypothetical protein SPAB_01453 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401943|gb|ACF62165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406674|gb|ACF66893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457557|gb|EDX46396.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195633960|gb|EDX52312.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197213916|gb|ACH51313.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197936631|gb|ACH73964.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199601835|gb|EDZ00381.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339285|gb|EDZ26049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342722|gb|EDZ29486.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205351018|gb|EDZ37649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206708520|emb|CAR32841.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246962|emb|CBG24779.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993724|gb|ACY88609.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158300|emb|CBW17799.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912765|dbj|BAJ36739.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320085723|emb|CBY95501.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224404|gb|EFX49467.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322714814|gb|EFZ06385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323130046|gb|ADX17476.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326623115|gb|EGE29460.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988663|gb|AEF07646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 360

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|284007355|emb|CBA72733.1| peptide chain release factor 1 [Arsenophonus nasoniae]
          Length = 349

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 150/244 (61%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY R+AE R+++ E +   +GE  G K     +
Sbjct: 96  DEKNCFLEIRAGTGGDEAAIFAGDLFRMYNRYAESRRWRIEVMNASEGEHGGYKEIIAKV 155

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E G HR+ R+   +S  R HTS  ++ +   +  +   +I+ SD RIDT
Sbjct: 156 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTVAILAEIPATELPDINPSDLRIDT 215

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR
Sbjct: 216 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKALSVLAARIRAAEVQKR 275

Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            E     E+S+    +G G    +IR+Y   P   + D R N+      +V++G LD  +
Sbjct: 276 RE----AEASERRNLLGSGDRSDRIRTYNF-PQGRITDHRINLTLYRLDEVIEGKLDMLI 330

Query: 348 KATL 351
           +  +
Sbjct: 331 QPII 334


>gi|325981709|ref|YP_004294111.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
 gi|325531228|gb|ADZ25949.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
          Length = 359

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 192/356 (53%), Gaps = 25/356 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +L+ L  L   ++A   L      T +      ++E   L R  QH +  +   +E
Sbjct: 11  RLSVRLDELNHLLSSESATADLDHYRKLTREHAEIVPIVE---LYRSYQHFERDVQTARE 67

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEA-DSNDAYL 119
           +   L              D     ET   + + KL ++E +  + LL  +  D  + +L
Sbjct: 68  MHADL--------------DMRAFAETEIQIGKEKLIQIESEIQKQLLPKDPNDERNIFL 113

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG GG ES  +A  L RMY+R+AE+++++ E +     E  G K     I G  AY 
Sbjct: 114 EIRAGTGGDESALFAGNLFRMYSRYAERQRWQVEIISQSLSEIGGYKEIIAKIIGYGAYS 173

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E G HR+ R+   ++  R HTS  ++ + P  D+  E+ ++ ++ RIDT+RASGAG
Sbjct: 174 KLKFESGGHRVQRVPVTETQGRVHTSTCTVAIMPEADEVSEVVLNPAELRIDTFRASGAG 233

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N TDSAVR+TH+PTG+VV+CQ  RSQHKNKAQA ++L A++++ ++  R + A   
Sbjct: 234 GQHINKTDSAVRVTHLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQM--RAQHAEQA 291

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            + K+ +G G    +IR+Y   P   V D R N+       ++DGD+D+   A +A
Sbjct: 292 AARKSLVGTGERSERIRTYNF-PQGRVTDHRINLTLYKMDQIMDGDIDELCSALMA 346


>gi|194099102|ref|YP_002002187.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|239999408|ref|ZP_04719332.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|240014585|ref|ZP_04721498.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI18]
 gi|240081334|ref|ZP_04725877.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|240113543|ref|ZP_04728033.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|240116107|ref|ZP_04730169.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|240121107|ref|ZP_04734069.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID24-1]
 gi|240123936|ref|ZP_04736892.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|240126136|ref|ZP_04739022.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|240128613|ref|ZP_04741274.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494127|ref|ZP_05107298.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|260440083|ref|ZP_05793899.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|268595228|ref|ZP_06129395.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268597436|ref|ZP_06131603.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268599608|ref|ZP_06133775.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268601773|ref|ZP_06135940.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268682561|ref|ZP_06149423.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268684722|ref|ZP_06151584.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268687001|ref|ZP_06153863.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291043371|ref|ZP_06569094.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|238690206|sp|B4RN52|RF1_NEIG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193934392|gb|ACF30216.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|226513167|gb|EEH62512.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|268548617|gb|EEZ44035.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268551224|gb|EEZ46243.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268583739|gb|EEZ48415.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268585904|gb|EEZ50580.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268622845|gb|EEZ55245.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268625006|gb|EEZ57406.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268627285|gb|EEZ59685.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291012977|gb|EFE04960.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|317164656|gb|ADV08197.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 358

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%)

Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD + + ++E+ AG GG E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G 
Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G  AY  LK E G HR+ R+   +S  R HTS  ++ V P  D+  +IE++ 
Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R DT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L 
Sbjct: 220 ADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             + QKRE  A      K+ IG G    +IR+Y   P   V D R N+       V+DGD
Sbjct: 280 --DAQKREVQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336

Query: 343 LDDFMKATLA 352
           L +   A +A
Sbjct: 337 LAEITDALIA 346


>gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 317

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 64  DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 124 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 184 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 243

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 244 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 295


>gi|282850388|ref|ZP_06259767.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294792026|ref|ZP_06757174.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
 gi|294793891|ref|ZP_06759028.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|282579881|gb|EFB85285.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294455461|gb|EFG23833.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|294457256|gb|EFG25618.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
          Length = 360

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 188/332 (56%), Gaps = 12/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81
           L  +  DP +     E + L R+   L   +   +  +  L      +E+    +++E+ 
Sbjct: 16  LEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEVIEDKSMDEEF 75

Query: 82  CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + QE   +L+  K E+E K Q   L     D  +  +E+  GAGG E+  +A  L RM
Sbjct: 76  REMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+   ++  
Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRVPATETQG 195

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+P+G+V
Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPSGIV 254

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ +RSQ +N+ +A  +LRAKL +   Q  E I+++    K+++G G    +IR+Y  
Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDQAEQ--EAISSMAADRKSQVGTGDRSERIRTYNY 312

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            P   V D R N+       +L+GDLD+ ++A
Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343


>gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 335

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/280 (39%), Positives = 163/280 (58%), Gaps = 9/280 (3%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEAD 113
           I  ++ I+  L D L+++E A E+ D   + +    L + +L   +   + +L    + D
Sbjct: 49  IELVRRIEAELADALLMVEEAGEDADMLEMVQAEAGLLKTRLPEAHSALQIMLLPKDKDD 108

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           + +A LEV AG GG E+  +A+ L  MY R+A K  +  E +E+ +    G K AT  I 
Sbjct: 109 ARNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWNFEVMEVSETGIGGYKEATATIS 168

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G + +  LK E GVHR+ R+   ++  R HTS +++ V P  +D ++I I ESD R+D +
Sbjct: 169 GNDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIRIDESDLRVDVF 227

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKN+A+A  +LRA++Y+ E  + E
Sbjct: 228 RASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARVE 287

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
             A      K ++G G    +IR+Y   P   V D R N 
Sbjct: 288 --AQRAAERKGQVGSGDRSERIRTYNF-PQGRVTDHRINF 324


>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
 gi|166223564|sp|A6SUF6|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 360

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  LLRMY+R+AE+ +++ E +     E  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDEAALFAGDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ + P  D+  ++ I+ +D RIDT
Sbjct: 167 IGFGAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  R
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--R 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ +    + K+ IG G    +IR+Y   P   + D R N+       ++DGDL +   A
Sbjct: 285 EQQSKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|238019080|ref|ZP_04599506.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
 gi|237864335|gb|EEP65625.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 187/332 (56%), Gaps = 12/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81
           L  +  DP +     E + L R+   L   +   +  +  L      +E+    +++E+ 
Sbjct: 16  LEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLAGIDEAMEVIEDKSMDEEF 75

Query: 82  CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + QE    L+  K E+E K Q   L     D  +  +E+  GAGG E+  +A  L RM
Sbjct: 76  REMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+   ++  
Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRVPATETQG 195

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+P+G+V
Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPSGIV 254

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ +RSQ +N+ +A  +LRAKL +   Q  E I+++    K+++G G    +IR+Y  
Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDQAEQ--EAISSMAADRKSQVGTGDRSERIRTYNY 312

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            P   V D R N+       +L+GDLD+ ++A
Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343


>gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98]
 gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14]
 gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91]
 gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9]
 gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210]
 gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894]
 gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC
           13177]
 gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112]
 gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215]
 gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
 gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|61214599|sp|Q63QF0|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361515|sp|Q3JN85|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223535|sp|A3NZS4|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223536|sp|A3NE24|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL 
Sbjct: 10  DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69

Query: 77  LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               D S+       L+   D + R+  E+   Q   L     D  + ++E+ AG GG E
Sbjct: 70  A---DASMRDFAEDELRGARDRMGRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR
Sbjct: 124 SALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G
Sbjct: 244 VRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|269468531|gb|EEZ80185.1| Protein chain release factor A [uncultured SUP05 cluster bacterium]
          Length = 363

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 154/243 (63%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +E+ AG GG E+  ++  L RMY+R+ EK+K++ EA+  + G+  G K     I
Sbjct: 109 DSRNIIIEIRAGTGGDEASIFSGDLFRMYSRYVEKQKWQMEAMSSNIGDHGGFKEVIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS  ++ + P V++  E++I+ SD RIDT
Sbjct: 169 SGTNVYSKLKFESGAHRVQRVPETESQGRVHTSACTVAIMPEVENIEEVDINMSDVRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSAVR+THIPTG VV+CQ  RSQHKNKAQA ++L +++  L+ Q++
Sbjct: 229 FRASGAGGQHVNKTDSAVRVTHIPTGTVVECQDGRSQHKNKAQALSVLASRI--LDAQQQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+      + K  IG G   ++IR+Y   P   + D R N+     ++V++GDL+  ++ 
Sbjct: 287 EQQKEQALTRKELIGSGDRSQRIRTYNY-PQGRITDHRINLTLYKLAEVMEGDLEAIIEP 345

Query: 350 TLA 352
            + 
Sbjct: 346 LIV 348


>gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
 gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
          Length = 362

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N AYLE+ AG GG E+  ++  L RMY+++AE   ++ E L  ++GE  G K     +
Sbjct: 107 DANAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG +K E G HR+ R+   +S  R HTS  ++ + P VD    ++I+ +D RIDT
Sbjct: 167 DGDGVYGRMKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A ++L ++L   +   +
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMSLLVSRLENAKRAAQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E  +   E  +  +G G    +IR+Y   P   + D R N+       +++GDL++ +
Sbjct: 287 E--SATSEMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLNELL 341


>gi|168056816|ref|XP_001780414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668174|gb|EDQ54787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 362

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/290 (40%), Positives = 168/290 (57%), Gaps = 20/290 (6%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLL---SGEADSNDAYLEVHAGAG 126
           +L+E + E++D    Q  ++ L+ +  LE E  Q   LL     EADS    LEV AG G
Sbjct: 65  MLIEESAEDEDMK--QAAAEELRSVSNLETEDLQRMLLLMLPKDEADSRGCILEVRAGTG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A+ + RMY R+A+K+ +  E L I      G K A+  I G   YG LK E G
Sbjct: 123 GDEASLFASDIFRMYERYAQKKLWSFEVLSITQTNSKGYKEASASITGDGVYGKLKFESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   + + R HTS +S+ V P  D+ +++++   D RIDTYRA GAGGQH NTT
Sbjct: 183 VHRVQRVPVTEKSGRVHTSAASVAVLPQADE-VDVQMRNEDLRIDTYRAGGAGGQHANTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE------EIANIGE 300
            SAVR+TH+PTG+V+  Q ERSQH N+A++  +LRAKL+E E  ++        +  IG 
Sbjct: 242 SSAVRVTHLPTGIVIAIQDERSQHMNRAKSLKLLRAKLFERERMQQAMARSTLRLEQIGS 301

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
             ++E     +IR+Y   P   V D R NI + S   ++ G+ LD F+ A
Sbjct: 302 GDRSE-----RIRTYNF-PQGRVTDHRVNITQHSIVQIMQGEGLDGFIDA 345


>gi|317495271|ref|ZP_07953641.1| peptide chain release 1 [Gemella moribillum M424]
 gi|316914693|gb|EFV36169.1| peptide chain release 1 [Gemella moribillum M424]
          Length = 362

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/341 (37%), Positives = 195/341 (57%), Gaps = 21/341 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKE---IQDRLCDNLILLE 74
           +R   LN    DP +   V + K LM   +E++ ++  ++  +E   I  ++ D   LLE
Sbjct: 12  ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVAVFREYKNIVQQIADTKELLE 68

Query: 75  LALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131
           +  +++   ++QE    L+     +E E K    LL  +  D  +  +EV   AGG E+Q
Sbjct: 69  IEEDKEMKEMMQEEIKELEPSLAPMEEELKIL--LLPKDPNDGKNVVVEVRGAAGGDEAQ 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K E G HR+ 
Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P  ++ IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR
Sbjct: 187 RVPTTESSGRIHTSTATVVVLPEAEE-IEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+   Q  EE A      K+++G G  
Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   V D R  +       +++G LD+ ++A
Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343


>gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
 gi|259585239|sp|C4Z1S4|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
          Length = 357

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 189/350 (54%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  +  +P +  +  + K LM+E+  L   I    E ++  C   I
Sbjct: 1   MFDRLEDTVNRYEDITAELGNPDVVNDQEKFKKLMKEQSSLAPLIETYTEYKN--CKKNI 58

Query: 72  LLELAL--EEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGA 125
              LA+  EE D  + +   + L   K  VE  + E     L     D  D  +E+ AGA
Sbjct: 59  EDSLAILDEETDEELKEMAKEELNESKARVEELEHELKILLLPKDPNDDKDIVVEIRAGA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY  +A+ R +K E L   +    G+K    ++KG  AY  +K E 
Sbjct: 119 GGEEAALFAAELFRMYVHYAQARGWKVEVLSGDETGIGGMKEVEFMVKGQGAYSIMKYES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ RI   +SN R  TS +S+ V P  ++ ++I I E D RID  RASG GGQ VNT
Sbjct: 179 GVHRVQRIPVTESNGRIQTSTASVAVMPEAEE-VDIHIDEKDIRIDVMRASGNGGQCVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK  +     ++ +++
Sbjct: 238 TDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDIETQKAHDAE--ADARRSQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IG G    +IR+Y   P   V D R  +       ++DGD+ D + A +A
Sbjct: 296 IGTGDRAEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQDIIDACIA 344


>gi|90420193|ref|ZP_01228101.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335527|gb|EAS49277.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 359

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/244 (41%), Positives = 153/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+AE  ++K E +   +GE  G +     
Sbjct: 107 ADEKGAILEIRAGTGGSEAGLFAGDLFRMYQRYAEMNRWKVEIISASEGEVGGYREVIAA 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D I++E+   D RID
Sbjct: 167 IRGVGVFSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-IDVEVKTEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A+A  +L+A+L+++E Q+
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRARAMQVLKARLFDMERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            ++      + K+++G G    +IR+Y   P   V D R N+       V++G++D+ + 
Sbjct: 285 ADD--ERSAARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEMDELVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALIA 345


>gi|77164037|ref|YP_342562.1| peptide chain release factor 1 [Nitrosococcus oceani ATCC 19707]
 gi|254436043|ref|ZP_05049550.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
 gi|119361569|sp|Q3JDR4|RF1_NITOC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76882351|gb|ABA57032.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089154|gb|EDZ66426.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/265 (41%), Positives = 159/265 (60%), Gaps = 14/265 (5%)

Query: 96  KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           KLE   ++  +LL  S   D  + +LE+ AG GG E+  +A+ LLRMY R+AE+R ++TE
Sbjct: 90  KLERLDRELHTLLLPSDPNDKRNIFLEIRAGTGGDEAALFASDLLRMYLRYAEQRGWRTE 149

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +    GE  G K   + I G  AY  LK E G HR+ R+   +S  R HTS  ++ + P
Sbjct: 150 IMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQRVPQTESQGRIHTSACTVAIMP 209

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             ++  +I+I+ +D R+DT+RASGAGGQHVN TDSA+RITH+ +G+VV+CQ ERSQHKN+
Sbjct: 210 EAEEIDDIDINPADLRVDTFRASGAGGQHVNKTDSAIRITHLASGIVVECQDERSQHKNR 269

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE---IGWG---RQIRSYVLQPYQMVKDLR 327
           A+A ++LR K     L+  EE   + E + T    IG G    +IR+Y   P   V D R
Sbjct: 270 ARAMSLLRTK-----LKSEEEAKLVAEETATRRSLIGSGDRSERIRTYNF-PQGRVTDHR 323

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
            N+      ++L G+LD  +   +A
Sbjct: 324 INLTLYKLDEILQGNLDAIIDPLVA 348


>gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
 gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
 gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
 gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
 gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
 gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
 gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
 gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
          Length = 359

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 147/245 (60%), Gaps = 9/245 (3%)

Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D ND   A+LE+ AG GG E+  ++  L RMY ++ + + ++ E L  ++GE  G K   
Sbjct: 104 DPNDKATAFLEIRAGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEII 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             + G   YG LK E G HR+ R+   +S  R HTS  ++ V P V+    +EI+ SD R
Sbjct: 164 ARVSGIGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDTYR+SGAGGQHVNTTDSAVRITHIPTGVV +CQQERSQH NK +A  ML A++ + ++
Sbjct: 224 IDTYRSSGAGGQHVNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV 283

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           Q   +I    +  +  +G G    +IR+Y   P   + D R N+       +++GDL + 
Sbjct: 284 QA--QIDATSDMRRNLVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTEL 340

Query: 347 MKATL 351
           + + L
Sbjct: 341 LDSLL 345


>gi|82703754|ref|YP_413320.1| peptide chain release factor 1 [Nitrosospira multiformis ATCC
           25196]
 gi|119361568|sp|Q2Y5P3|RF1_NITMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82411819|gb|ABB75928.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosospira
           multiformis ATCC 25196]
          Length = 358

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 13/338 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLILLELAL 77
           RL  LN       +  N+ + + L RER  +   +    ++++  QD      +  E  +
Sbjct: 15  RLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQDIHTAQEMAAEAEM 74

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            E   + +++  + L R   E++ KQ   L     D  + +LE+ AG GG ES  +A  L
Sbjct: 75  REFADAEIRDAKERLVRYGAELQ-KQL--LPKDPNDERNIFLEIRAGTGGDESALFAADL 131

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+AE+++++ E +     +  G K     I G  AY  LK E G HR+ R+   +
Sbjct: 132 FRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLKFESGGHRVQRVPATE 191

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS  ++ V P  D+  ++ ++ ++ RIDT+RASGAGGQH+N TDSAVRITH+PT
Sbjct: 192 TQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQHINKTDSAVRITHLPT 251

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRS 314
           G+VV+CQ  RSQHKNKAQA ++L A++ + ++Q  E+ +    + K+ +G G    +IR+
Sbjct: 252 GIVVECQDGRSQHKNKAQAMSVLAARIRDKQMQ--EQQSKQAATRKSLVGTGNRSGRIRT 309

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           Y   P   + D R N+       ++DGDL++   A LA
Sbjct: 310 YNF-PQGRITDHRINLTLYKIEQIMDGDLNELCSALLA 346


>gi|315638047|ref|ZP_07893232.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
 gi|315481895|gb|EFU72514.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
          Length = 355

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 192/341 (56%), Gaps = 15/341 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLILLELA 76
           ++R   LNT   D  +  ++ +   L +E+++L+  +   K+  + L    DN  LL   
Sbjct: 10  LKRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALLN-- 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
            + +   + +E   NL+  K+  E +    LL  +  D  + +LE+ AG GG E+  +  
Sbjct: 68  -DPEFSELAKEELKNLEEAKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFVG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L++ Y R+A+ R +K E +   +G   G K   +L+KG  AY  LK E G HR+ RI  
Sbjct: 127 DLVKAYARYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQRIPQ 186

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ + P VDD IEI+I+ +D +ID  R+SG GGQ VNTTDSAVRITHI
Sbjct: 187 TESQGRIHTSAITVAIMPEVDD-IEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHI 245

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+G+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +I
Sbjct: 246 PSGLVVVNQDGKSQHKNKESAMKILKARLY--EMQESERLAKESEARKSQVGSGDRSERI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           R+Y   P   + D R N+       +++G L D+ ++  +A
Sbjct: 304 RTYNF-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIA 343


>gi|116052810|ref|YP_793127.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893762|ref|YP_002442631.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
 gi|254244443|ref|ZP_04937765.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|296391486|ref|ZP_06880961.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAb1]
 gi|122257179|sp|Q02G09|RF1_PSEAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739119|sp|B7V0L1|RF1_PSEA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115588031|gb|ABJ14046.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197821|gb|EAZ61884.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|218773990|emb|CAW29805.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LE+ AG GG E+  ++  L RMY+R+AE++ ++ E L  ++GE  G K     +
Sbjct: 109 DSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +    
Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + K  +G G    +IR+Y   P   V D R N+   S  +V++G ++  ++ 
Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383]
 gi|119361516|sp|Q39K18|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp.
           383]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELISA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|73662075|ref|YP_300856.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|119361617|sp|Q49Z65|RF1_STAS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72494590|dbj|BAE17911.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 358

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 191/350 (54%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  N    +   +E+  L   +      K+ ++ + +
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNNPDNLRKYSKEQAELQKTVDVYRDYKQTKEDISE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
              +L    + D+  +L+E    LQ    KLE E K F  +     D  D  +E+ A AG
Sbjct: 61  VEEMLRDTKDNDEIEMLKEEHQTLQNKVPKLEEELK-FLLIPKDPNDDKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+++AE   +KT+ +E+ + +  G K  +  + G  A+  LK E G
Sbjct: 120 GDEAAIFAGDLFRMYSKYAETLNYKTDIVEVTESDHGGYKEISFSVSGNGAFSKLKYENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIE+   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEVRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTGV+     E+SQ +N+ +A  +L+A+L++++LQ  EE        K+ +
Sbjct: 239 DSAVRITHIPTGVIA-TSSEKSQIQNREKALKVLKARLFDMKLQ--EEQQKYAAQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLA 352
           G G    +IR+Y   P   V D R  +       +++G LD+ + A TLA
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLA 344


>gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
          Length = 359

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 147/245 (60%), Gaps = 9/245 (3%)

Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D ND   A+LE+ AG GG E+  ++  L RMY ++ + + ++ E L  ++GE  G K   
Sbjct: 104 DPNDKATAFLEIRAGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEII 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             + G   YG LK E G HR+ R+   +S  R HTS  ++ V P V+    +EI+ SD R
Sbjct: 164 ARVSGIGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDTYR+SGAGGQHVNTTDSAVRITHIPTGVV +CQQERSQH NK +A  ML A++ + ++
Sbjct: 224 IDTYRSSGAGGQHVNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV 283

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           Q   +I    +  +  +G G    +IR+Y   P   + D R N+       +++GDL + 
Sbjct: 284 QA--QIDATSDMRRNLVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTEL 340

Query: 347 MKATL 351
           + + L
Sbjct: 341 LDSLL 345


>gi|319781345|ref|YP_004140821.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167233|gb|ADV10771.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 359

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  +A LE+ AG GG E+  +A  L RMY R+A +R ++ E     DG+  G K     
Sbjct: 107 ADDKNAILEIRAGTGGDEAALFAGDLFRMYERYAAERGWRFETASASDGDAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +++ R HTS +++ V P  ++ ++I+I   D RID
Sbjct: 167 VSGKGVFAHLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEE-VDIDIRAEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASG+GGQHVNTTDSAVRITH+PTG++V  Q E+SQH+N+A+A  +LRA+LY+LE  K
Sbjct: 226 TMRASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERGK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +E     ES K+++G G    +IR+Y   P   V D R N+       V+ G+LD+ + 
Sbjct: 285 ADE--ERSESRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIIN 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALIA 345


>gi|313107327|ref|ZP_07793522.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
 gi|310880024|gb|EFQ38618.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LE+ AG GG E+  ++  L RMY+R+AE++ ++ E L  ++GE  G K     +
Sbjct: 109 DSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQATIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +    
Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + K  +G G    +IR+Y   P   V D R N+   S  +V++G ++  ++ 
Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|258645288|ref|ZP_05732757.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
 gi|260402638|gb|EEW96185.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 185/334 (55%), Gaps = 13/334 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--DRLCDNLI-LLELALE 78
           R   L  +  DP +  N  + + L +E   L   ++  +  +  D+ C   + +LE   +
Sbjct: 12  RFRSLEDQLSDPSVISNQNKWRTLSKEHSDLGEIVTLYRSYKKVDKTCKEAVNILEDKSQ 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136
            D   + +E     +++K E++ KQ   LL      D  +  LE+ AG GG E+  +A  
Sbjct: 72  SDLHELAKEELKEAEKMKNELD-KQIHFLLIPKDPNDGKNVILEIRAGTGGEEAALFAAD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LL+MY ++AE + ++ E  + ++ +  G +  T +I G NAY  LK E GVHR+ RI   
Sbjct: 131 LLKMYLKFAENKGWRVELADANETDLGGFREVTCIIYGKNAYSLLKFESGVHRVQRIPAT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ V P V++ ++I+I+  D RID YRASGAGGQH+N T SA+RITHIP
Sbjct: 191 ESQGRVHTSAVTVAVLPEVEN-VDIDINRDDLRIDVYRASGAGGQHINKTSSAIRITHIP 249

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VV CQ ERSQ +NK +A  +L+A+LY+  +  RE         K ++G G    +IR
Sbjct: 250 SGMVVTCQNERSQRQNKEKALQILKARLYDRAV--RESQDKTAADRKGQVGSGDRSERIR 307

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +Y   P   V D R N+      + L+G++D  +
Sbjct: 308 TYNF-PQGRVTDHRVNVSVYQLDNFLNGNMDGIL 340


>gi|292493886|ref|YP_003529325.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
 gi|291582481|gb|ADE16938.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
          Length = 363

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/265 (41%), Positives = 160/265 (60%), Gaps = 14/265 (5%)

Query: 96  KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           KLE   ++ ++LL  S   D  + +LE+ AG GG E+  +A+ LLRMY R+AE+R ++ E
Sbjct: 90  KLEQLDQELQTLLLPSDPNDKRNIFLEIRAGIGGDEAALFASDLLRMYLRYAEQRGWRKE 149

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +    GE  G K   + I G  AY  LK E G HR+ R+   +S  R HTS  ++ + P
Sbjct: 150 IISDSPGEYGGHKEVIIRIVGEGAYSRLKFESGGHRVQRVPQTESQGRIHTSACTVAIMP 209

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             ++  +I+I+ SD RIDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+
Sbjct: 210 EAEEIDDIDINLSDLRIDTFRASGAGGQHVNKTDSAIRITHLPTGIVVECQDERSQHKNR 269

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE---IGWG---RQIRSYVLQPYQMVKDLR 327
            +A ++LRAK     L+ +EE     E + T    +G G    +IR+Y   P   V D R
Sbjct: 270 VRAMSLLRAK-----LKSKEETKLAAEEAATRRSLVGSGDRSERIRTYNF-PQGRVTDHR 323

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
            N+      ++L+G L+  +   +A
Sbjct: 324 INLTLYKLDEILEGHLNAVIDPLIA 348


>gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH]
 gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|119361517|sp|Q2SUG2|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/344 (35%), Positives = 189/344 (54%), Gaps = 15/344 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL 
Sbjct: 10  DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69

Query: 77  LEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQ 131
               D S+     D L+  R ++     + +++L  + D ND    ++E+ AG GG ES 
Sbjct: 70  A---DASMRDFAEDELRGARERMSRLAAELQTMLLPK-DPNDERNIFVEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1]
 gi|172048528|sp|A5WFG1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp.
           PRwf-1]
          Length = 364

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 151/246 (61%), Gaps = 15/246 (6%)

Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D ND   A+LE+ AG GG E+  ++  L RMY R+A  + +  E L  ++GE  G K   
Sbjct: 107 DPNDKVPAFLEIRAGTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEII 166

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             + G + YG LK E G HR+ R+   +S  R HTS  ++ V P V+    +E++ +D R
Sbjct: 167 SRVSGNDVYGRLKFESGAHRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVELNPADIR 226

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +DT+R+SGAGGQHVNTTDSAVR+THIPTGVV +CQQERSQHKN+A+A  ML A++ + ++
Sbjct: 227 MDTFRSSGAGGQHVNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKV 286

Query: 290 QKREEIAN------IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           Q++ + A+      +G   ++E     +IR+Y   P   + D R N+       +++GDL
Sbjct: 287 QEQVDTADALRRNLVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDL 340

Query: 344 DDFMKA 349
            + + A
Sbjct: 341 TELLDA 346


>gi|330815385|ref|YP_004359090.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
 gi|327367778|gb|AEA59134.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 150/242 (61%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKERALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ M A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLEALMDGDLDE-MIA 342

Query: 350 TL 351
           TL
Sbjct: 343 TL 344


>gi|269798159|ref|YP_003312059.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
 gi|269094788|gb|ACZ24779.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
          Length = 360

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 187/332 (56%), Gaps = 12/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81
           L  +  DP +     E + L R+   L   +   +  +  L      +E+    +++E+ 
Sbjct: 16  LEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEVIEDKSMDEEF 75

Query: 82  CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + QE    L+  K E+E K Q   L     D  +  +E+  GAGG E+  +A  L RM
Sbjct: 76  REMAQEELKELKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+   ++  
Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRVPATETQG 195

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+P+G+V
Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPSGIV 254

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ +RSQ +N+ +A  +LRAKL +   Q  E I+++    K+++G G    +IR+Y  
Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDQAEQ--EAISSMAADRKSQVGTGDRSERIRTYNY 312

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            P   V D R N+       +L+GDLD+ ++A
Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343


>gi|326796200|ref|YP_004314020.1| peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
 gi|326546964|gb|ADZ92184.1| Peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
          Length = 362

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LEV AG GG E+  ++  L RMY+R+AE +++K E +  ++GE  G K     I
Sbjct: 109 DSKNVFLEVRAGTGGDEASIFSGDLFRMYSRYAETQRWKVEIVSANEGEHGGYKEIIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P +D+  +I+I+++D RIDT
Sbjct: 169 VGEGAYSKLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVSDIDINKADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RI H+PTGVVV+CQ ERSQHKN+A+A  +L ++L   E  K 
Sbjct: 229 FRASGAGGQHVNKTDSAIRIVHLPTGVVVECQDERSQHKNRAKAMALLASRLKAAEEDKA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +  E+ ++ +G G    +IR+Y   P   V D R N+      +++ GDLD
Sbjct: 289 AAEQS--ETRRSLVGTGDRSDRIRTYNY-PQGRVTDHRINLTLYKLDEIVAGDLD 340


>gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
 gi|238693068|sp|B4E6U6|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
          Length = 360

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 148/240 (61%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGA 343


>gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054]
 gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424]
 gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
 gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|119361514|sp|Q1BSB1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223531|sp|A0K437|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688554|sp|B1JUS4|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia AU 1054]
 gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia HI2424]
 gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
          Length = 360

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 148/240 (61%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGA 343


>gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4]
 gi|166223537|sp|A4JB50|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           vietnamiensis G4]
          Length = 360

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|15599860|ref|NP_253354.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
 gi|107099668|ref|ZP_01363586.1| hypothetical protein PaerPA_01000686 [Pseudomonas aeruginosa PACS2]
 gi|12231016|sp|P42806|RF1_PSEAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9950920|gb|AAG08052.1|AE004880_8 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
          Length = 360

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LE+ AG GG E+  ++  L RMY+R+AE++ ++ E L  ++GE  G K     +
Sbjct: 109 DSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +    
Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + K  +G G    +IR+Y   P   V D R N+   S  +V++G ++  ++ 
Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|332716892|ref|YP_004444358.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
 gi|325063577|gb|ADY67267.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
          Length = 360

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A  + +K E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   +++ R HTS +++ V P  +D I++EI   D RID
Sbjct: 167 ISGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAED-IDVEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+A+A  +LR++LY++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGLIV-TSSEKSQHQNRAKAMQVLRSRLYDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  +      K+++G G    +IR+Y   P   V D R N+       +++G++D+ + 
Sbjct: 285 VE--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMIEGEIDELVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALIA 345


>gi|188534015|ref|YP_001907812.1| peptide chain release factor 1 [Erwinia tasmaniensis Et1/99]
 gi|238689693|sp|B2VEH7|RF1_ERWT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188029057|emb|CAO96925.1| Peptide chain release factor 1 (RF-1) [Erwinia tasmaniensis Et1/99]
          Length = 360

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  +A  L RMY+R+AE R++K E +  ++GE  G K     +
Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT
Sbjct: 167 VGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286

Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++     E S T    +G G +    R+Y   P   V D R N+      + ++G LD  
Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340

Query: 347 MKATL 351
           ++  +
Sbjct: 341 IEPIV 345


>gi|157145532|ref|YP_001452851.1| peptide chain release factor 1 [Citrobacter koseri ATCC BAA-895]
 gi|166223546|sp|A8AG02|RF1_CITK8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157082737|gb|ABV12415.1| hypothetical protein CKO_01275 [Citrobacter koseri ATCC BAA-895]
          Length = 360

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338


>gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
 gi|238691299|sp|B2JHK8|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
          Length = 360

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       +++GDLD+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLESIMEGDLDELIAA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
 gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
          Length = 360

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 146/240 (60%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  L RMY+R+AE++++K E +   + E  G K     I
Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E G HR+ R+   ++  R HTS  ++ V P VD+  ++ IS +D RIDT
Sbjct: 167 EGFGAYSKLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH PTG+VV+CQ  RSQH NKAQA  +L A++   ++   
Sbjct: 227 FRASGAGGQHINKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVN-- 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ + I    ++ IG G    +IR+Y   P   + D R N+       + +GD+D+ + A
Sbjct: 285 EQQSKIASERRSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINA 343


>gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
 gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
          Length = 360

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 9/261 (3%)

Query: 96  KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +LEVE ++   LL  +  D  + ++E+ AG GG ES  +A  LLRMY R+AE+++++ E 
Sbjct: 91  RLEVELQKM--LLPKDPNDDRNIFVEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEM 148

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +     +  G K   + I G  AY  LK E G HR+ R+   ++  R HTS  ++ V P 
Sbjct: 149 MSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPE 208

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK 
Sbjct: 209 ADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKD 268

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +L A++   + Q  E+ A    + K+ IG G    +IR+Y   P   + D R N+ 
Sbjct: 269 RALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLT 325

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
                 ++DGDLD+ + A ++
Sbjct: 326 LYRLEAIMDGDLDELIGALVS 346


>gi|30249865|ref|NP_841935.1| peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718]
 gi|46576779|sp|Q82TH4|RF1_NITEU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30180902|emb|CAD85824.1| prfA: peptide chain release factor 1 [Nitrosomonas europaea ATCC
           19718]
          Length = 359

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 148/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  L RMY+R+AE+  ++ E +  +  E  G K   + I
Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  +I ++ +D RIDT
Sbjct: 167 IGHGAYSRLKFESGGHRVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+V +CQ+ RSQHKNKAQA ++L A++  L+ Q R
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARI--LDKQVR 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A    + K+ +G G    +IR+Y   P   + D R N+       ++DG+LD+   A
Sbjct: 285 AQQAEQAATRKSLVGSGERSERIRTYNF-PQGRITDHRINLTLYKIEQIIDGELDELCSA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|157736354|ref|YP_001489037.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315635491|ref|ZP_07890757.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
 gi|166977359|sp|A8EQZ4|RF1_ARCB4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157698208|gb|ABV66368.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315480249|gb|EFU70916.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
          Length = 355

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L R Y R+AE   +K E +   D E  G K   +L+
Sbjct: 104 DDRNIYLELRAGTGGDEAAIFVGDLFRAYLRYAENNGWKVEIMSSSDSESGGYKEIVILV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + Y  LK E G HR+ R+   +S  R HTS  ++ V P VDD +EIEI+E+D +ID 
Sbjct: 164 KGDHVYSKLKFEGGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEIEINENDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVRITHIP+G+VV  Q ++SQHKNK +A  +L+AKLYE+E++K+
Sbjct: 223 MRASGNGGQSVNTTDSAVRITHIPSGIVVTNQDQKSQHKNKDRALKVLKAKLYEIEMEKK 282

Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNI 330
            E    G + K ++G G    +IR+Y   P   + D R N+
Sbjct: 283 MEAE--GATRKEQVGTGDRSGRIRTYNY-PQNRISDHRINL 320


>gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4]
          Length = 360

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/344 (35%), Positives = 189/344 (54%), Gaps = 15/344 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL 
Sbjct: 10  DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69

Query: 77  LEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQ 131
               D S+     D L+  R ++     + +++L  + D ND    ++E+ AG GG ES 
Sbjct: 70  A---DASMRDFAEDELRGARERMSRLAAELQTMLLPK-DPNDERNIFVEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|310767482|gb|ADP12432.1| peptide chain release factor 1 [Erwinia sp. Ejp617]
          Length = 360

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  +A  L RMY+R+AE R++K E +  ++GE  G K     +
Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT
Sbjct: 167 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286

Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++     E S T    +G G +    R+Y   P   V D R N+      + ++G LD  
Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340

Query: 347 MKATL 351
           ++  +
Sbjct: 341 IEPIV 345


>gi|158321600|ref|YP_001514107.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
 gi|166977358|sp|A8MJX9|RF1_ALKOO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158141799|gb|ABW20111.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
          Length = 357

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 146/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ AGAGG E+  +A  L RMYTR+AE   +K E +  +D    G K    +I
Sbjct: 107 DDKDVIVEIRAGAGGDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ RI   +S  R HTS  ++ V P  DD ++ E+  +D R+D 
Sbjct: 167 KGHGAYSRLKYESGVHRVQRIPSTESGGRIHTSTITVAVLPEADD-VDFELDMNDIRVDV 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVR+THIPTG VV CQ E+SQ KNK +A  +LRA+L ++ +Q  
Sbjct: 226 FRSSGNGGQSVNTTDSAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARLLDVLIQ-- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A I +  K+++G G    +IR+Y   P   + D R N+        L+GD+ + + A
Sbjct: 284 EQQAEIAQDRKSQVGTGDRSERIRTYNF-PQGRITDHRINVTLYRLDSFLNGDIQEMIDA 342

Query: 350 TLA 352
            + 
Sbjct: 343 LIT 345


>gi|317048556|ref|YP_004116204.1| peptide chain release factor 1 [Pantoea sp. At-9b]
 gi|316950173|gb|ADU69648.1| peptide chain release factor 1 [Pantoea sp. At-9b]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 147/242 (60%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    ++EV AG GG E+  +A  L RMY+R+AE R+++ E +  +DGE  G K     +
Sbjct: 107 DERPCFVEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWQVEIISSNDGEHGGYKEVIARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG  K E G HR+ R+   +S  R HTS  ++ V P + ++   +I+  D +IDT
Sbjct: 167 TGDGAYGRFKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E      + +  +G G    +IR+Y   P   V D R N+      + ++G LD  ++ 
Sbjct: 287 HEAE--ASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|260881387|ref|ZP_05404264.2| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
 gi|260849258|gb|EEX69265.1| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 152/242 (62%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +A  L RMY+R+AEK+ +K E ++ +  E  G K  T ++
Sbjct: 109 DEKNVIVEIRGGVGGEEAALFAGDLFRMYSRYAEKKGWKVELMDANATEIGGFKEVTFMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY +LK E G HR+ R+   +S  R HTS +++ V P  +D +++ I+ +D RIDT
Sbjct: 169 TGYGAYSYLKYESGTHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDVAINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQ+VN T++A+RITH+PTG+VVQCQ E+SQ KNK +A  +LRA++  L+  ++
Sbjct: 228 YCASGAGGQYVNRTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARI--LDKARQ 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A +    ++++G G    +IR+Y   P   V D R  +       +LDGDLD+ + A
Sbjct: 286 EQEAAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHKIDAILDGDLDELLAA 344

Query: 350 TL 351
            +
Sbjct: 345 LI 346


>gi|292488088|ref|YP_003530965.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|292899299|ref|YP_003538668.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291199147|emb|CBJ46261.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291553512|emb|CBA20557.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312172219|emb|CBX80476.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  +A  L RMY+R+AE R++K E +  ++GE  G K     +
Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT
Sbjct: 167 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286

Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++     E S T    +G G +    R+Y   P   V D R N+      + ++G LD  
Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340

Query: 347 MKATL 351
           ++  +
Sbjct: 341 IEPIV 345


>gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147]
 gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DERNIFVEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGYGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134]
 gi|119361585|sp|Q46WS9|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia
           eutropha JMP134]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/351 (36%), Positives = 187/351 (53%), Gaps = 21/351 (5%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDN 69
           L   D   +RL  +N          N+ + + L RE   L        F ++ QD L   
Sbjct: 6   LAKLDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQDDLATA 65

Query: 70  LILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124
             LL      DD  +    +D +   R +LE      + LL  + D ND     LE+ AG
Sbjct: 66  QALL------DDPEMKDFAADEIASARERLESLEGSLQKLLLPK-DPNDDRNLILEIRAG 118

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG ES  +A  LLRMYTR+AE+++++ E +   + +  G K   + I G  A+  LK E
Sbjct: 119 TGGEESALFAGDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   ++  R HTS  ++ V P  D+  ++EI+ SD RIDT+RASGAGGQHVN
Sbjct: 179 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVN 238

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A++ + ++  R   A    + + 
Sbjct: 239 KTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQM--RAAQAKEASTRRN 296

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            IG G    +IR+Y   P   V D R N+       ++DGDL++ + A  A
Sbjct: 297 LIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLEELVSALAA 346


>gi|206603661|gb|EDZ40141.1| Peptide chain release factor 1 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 361

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/336 (35%), Positives = 184/336 (54%), Gaps = 8/336 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   ++ K  DP + +N      L R++  L   +S  +     +     L EL  + D
Sbjct: 19  ERYREISGKMADPEVSRNPAIYMKLARDQSELSIIVSLYENYLRIIDQQKDLQELRQDPD 78

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              ++ +    L     +VE +  +S+L   E DS + +LE+ AGAGG E+  +A  L R
Sbjct: 79  FLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFARELAR 138

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E++ F+ E +E +D E  G +   + ++G  A+  LK E GVHR+ R+   ++ 
Sbjct: 139 MYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVPVTEAG 198

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P   + ++++I   D RIDT+ AS AGGQ VNTT SAVRITH+PT +
Sbjct: 199 GRIHTSTVTVAMIPEASE-VDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITHLPTNI 257

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV CQ ERSQ KNKA+A  +LRA+L E E  ++ E   I    K+++G G    +IR+Y 
Sbjct: 258 VVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSERIRTYN 315

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             P   V D R  +       V++G++D F+ A  A
Sbjct: 316 F-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRA 350


>gi|222823061|ref|YP_002574634.1| peptide chain release factor 1 [Campylobacter lari RM2100]
 gi|254790870|sp|B9KE98|RF1_CAMLR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222538282|gb|ACM63383.1| peptide chain release factor 1 [Campylobacter lari RM2100]
          Length = 355

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 190/332 (57%), Gaps = 16/332 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLCDNLILLELAL 77
           R   LNT   D ++  ++ +   L +E+++L+     A  ++K + D   + L+L +  L
Sbjct: 12  RFDELNTLLSDVNISNDISKMTALSKEQKNLEPIVEKAKEYLKTLDDIEENKLLLSDPEL 71

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136
            E    + +E   NL+ +K  +E +    LL  +  D  + +LE+ AG GG E+  +   
Sbjct: 72  GE----LAKEELKNLELLKPNLEEELKILLLPKDPNDDKNIFLEIRAGTGGDEASLFVGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L++ Y R+AE R +K E +   +G   G K   +LIKG  AY  LK E G HR+ R+   
Sbjct: 128 LVKAYIRYAENRDYKYEIVSSSEGSVGGFKEIIILIKGNGAYSRLKYEGGTHRVQRVPET 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P VDD +EI+I+ +D +ID  R+SG GGQ VNTTDSAVRITHIP
Sbjct: 188 ESQGRVHTSAITVAIMPEVDD-VEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV  Q  +SQHKNK  A  +L+A+L+  E+Q++E +A   E+ K+++G G    +IR
Sbjct: 247 TGIVVVNQDGKSQHKNKESAMKVLKARLF--EMQEQERLAKESEARKSQVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +Y   P   + D R N+       +L+G L D
Sbjct: 305 TYNF-PQNRISDHRINLTLYRLDAILEGGLFD 335


>gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
 gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 148/240 (61%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGA 343


>gi|163815255|ref|ZP_02206632.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
 gi|158449450|gb|EDP26445.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
          Length = 358

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 204/349 (58%), Gaps = 14/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  +  V +L  +N +  DP +  +  + + LM+E+  L   +   KE +D    + D
Sbjct: 1   MFDRLEELVDKLDTINNQLTDPDVVTDQNKFRKLMKEQSDLVPIVDKYKEYKDAKTTIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           +L +LE   +E+   + +E   N  + +LE   ++ + LL      DS +  +E+ AGAG
Sbjct: 61  SLEILEEENDEELREMAKEEM-NDAKSRLETIEQELKILLLPKDPNDSKNVIVEIRAGAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E G
Sbjct: 120 GDEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   +S  R HTS  ++ V P  ++ +++EI+++D RID  RASG GGQ VNTT
Sbjct: 180 VHRVQRIPKTESGGRIHTSTVTVAVMPEAEE-VDVEINDNDIRIDVMRASGNGGQCVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +        K++I
Sbjct: 239 DSAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAE--AADRKSQI 296

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V D R  +       +++GDL++ + + +A
Sbjct: 297 GTGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIA 344


>gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT]
 gi|119361559|sp|Q1GYE8|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus
           flagellatus KT]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/299 (39%), Positives = 168/299 (56%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSND 116
           IKE Q  L D   + E A EE +            + KL+   KQ + LL      D  +
Sbjct: 62  IKEAQAMLADPE-MKEFAQEETEAG----------KQKLDDIEKQLQKLLLPKDPNDERN 110

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            +LE+ AG GG ES  +A  L RMY+R+AE++ +K E +  ++ E  G K     I+G  
Sbjct: 111 IFLEIRAGTGGDESALFAGDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFG 170

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E G HR+ R+   ++  R HTS  ++ V P VD+  ++ I+ +D RIDT+RAS
Sbjct: 171 AYSKLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRAS 230

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N TDSAVRITH PTG+VV+CQ  RSQH NKAQA  +L A++   ++   E+ +
Sbjct: 231 GAGGQHINKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVD--EQQS 288

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            I    ++ IG G    +IR+Y   P   + D R N+       + +GD+D+ + A  A
Sbjct: 289 KIASERRSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINALAA 346


>gi|270261428|ref|ZP_06189701.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
 gi|270044912|gb|EFA18003.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
          Length = 361

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERGIFLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P V ++   EI+  D +IDT
Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      +V++G LD
Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLD 338


>gi|205355626|ref|ZP_03222396.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346403|gb|EDZ33036.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 355

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/221 (45%), Positives = 139/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AGAGG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGAGGDEASLFVGDLVKAYARYAENRSYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|56413303|ref|YP_150378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362228|ref|YP_002141865.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81599266|sp|Q5PCQ9|RF1_SALPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690759|sp|B5BI75|RF1_SALPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56127560|gb|AAV77066.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093705|emb|CAR59177.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 360

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDS++RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSSIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|329766951|ref|ZP_08258479.1| peptide chain release factor 1 [Gemella haemolysans M341]
 gi|328837676|gb|EGF87301.1| peptide chain release factor 1 [Gemella haemolysans M341]
          Length = 362

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 194/339 (57%), Gaps = 17/339 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKEIQD---RLCDNLILLE 74
           +R   LN    DP +   V + K LM   +E++ ++  ++  +E +D   ++ D   LLE
Sbjct: 12  ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKELLE 68

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
           +  +++   ++QE    L+     +E +    LL  +  D  +  +EV   AGG E+Q +
Sbjct: 69  IEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMYTR+AE + +K + LE  +    GIK    +I G + Y  +K E G HR+ R+
Sbjct: 129 AGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEVIFIISGEDVYSKMKFESGAHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S+ R HTS +++ V P  ++ IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR+T
Sbjct: 189 PTTESSGRIHTSTATVVVLPEAEE-IEIDINENDIRVDTFASSGAGGQSVNTTMSAVRLT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTGVVV  Q ERSQ KNK +A  +LRA++Y+   Q  EE A      K+++G G    
Sbjct: 248 HIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   V D R  +       +++G LD+ ++A
Sbjct: 306 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343


>gi|313888275|ref|ZP_07821946.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845678|gb|EFR33068.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 355

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +E+ AGAGG E+  +A +L R Y R+AE+  F+ E +  ++    G K    +I
Sbjct: 106 DSKNVMVEIRAGAGGDEAALFAGVLYRQYVRYAERSGFRVETISSNEIGIGGYKEIVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++IEI  +  + D 
Sbjct: 166 IGNGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEAED-VDIEIDPTQIKFDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ +NK +A  +LR+KLY+L+LQ++
Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLRNKEKAMKLLRSKLYDLKLQEQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E  ++  SS  +IG G    +IR+Y   P   V D R N+       + DGDLD+ + A
Sbjct: 285 SEKESMERSS--QIGTGDRSERIRTYNY-PQGRVTDHRINLTSHRIDAINDGDLDEIIDA 341

Query: 350 TLA 352
            + 
Sbjct: 342 LIT 344


>gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|32171533|sp|Q8CNI7|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153098|sp|Q5HMA4|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
 gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
 gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
          Length = 358

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L    ++++  +L+E S  L+    ++E ++ + LL      D  D  +E+ A AG
Sbjct: 61  IEDMLNETSDKEEVEMLKEESSALKTELPDME-EELKILLIPKDPNDDKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  +D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +     + +++G+LD+ ++A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGNLDEIVEA 340


>gi|317506166|ref|ZP_07963987.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255511|gb|EFV14760.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 354

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 148/244 (60%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LEV AGAGG ES  +A  L+RMYT++AE+R+++ E L I + +  G+K AT+ I
Sbjct: 101 DGEDVVLEVKAGAGGEESALFAGDLIRMYTKFAERRRWRVEVLSIAESDLGGVKDATISI 160

Query: 173 K--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           K            + WLK E GVHR+ R+   +S  R HTS + +  YP  +D+ E+ I 
Sbjct: 161 KRTGGDQSPAQGVWAWLKHEGGVHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPEVVID 220

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ES+ RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L
Sbjct: 221 ESELRIDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARL 280

Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            +L  +K    A  G   +   +    +IR+Y   P   + D R   + ++   VL+GDL
Sbjct: 281 EQLREEKAAADAASGRKEQIRTVDRSERIRTYNF-PENRIADHRIGYKASNLDMVLEGDL 339

Query: 344 DDFM 347
           +  +
Sbjct: 340 EPML 343


>gi|86138685|ref|ZP_01057258.1| peptide chain release factor 1 [Roseobacter sp. MED193]
 gi|85824745|gb|EAQ44947.1| peptide chain release factor 1 [Roseobacter sp. MED193]
          Length = 361

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 152/256 (59%), Gaps = 8/256 (3%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           E  Q   L    AD+  A LE+  G GG E+  +A  LLRMY R+AE R +K E +E   
Sbjct: 99  EALQLALLPKDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWKFEVIEEQA 158

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            E  GIK     IKG N +  +K E GVHR+ R+   +S  R HTS +++ V P   + +
Sbjct: 159 TELGGIKEVVAHIKGENVFARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAQE-V 217

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +++I  SD RIDT RASGAGGQHVNTTDSAVRITHIPTGV+V    E+SQH+N+  A  +
Sbjct: 218 DVQIDPSDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGVMV-VSAEKSQHRNREIAMQV 276

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           LRA+LY+LE Q+ +   +   +S+  +G G    +IR+Y   P   + D R N+      
Sbjct: 277 LRARLYDLERQRVDSERSADRASQ--VGSGDRSERIRTYNF-PQGRMSDHRINLTLYKLD 333

Query: 337 DVLDGDLDDFMKATLA 352
            ++ GDLD+ + A  A
Sbjct: 334 QIMQGDLDEIIDALTA 349


>gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16]
 gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16]
          Length = 356

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K   + I
Sbjct: 103 DDRNLLLEIRAGTGGEESALFAGDLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 163 AGDAAFSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A++   ++Q R
Sbjct: 223 FRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIK--DMQTR 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A    + +  IG G    +IR+Y   P   V D R N+       ++DGD+D+ + A
Sbjct: 281 AAQAKEASTRRNLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSA 339


>gi|297180848|gb|ADI17053.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_30A23]
          Length = 358

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 176/306 (57%), Gaps = 14/306 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY--K 102
           L RE   ++  +  ++  Q  + D      LA  EDD  +     D  + ++ E++   +
Sbjct: 36  LTREYAEMNPIVEEMRAFQKSVQDLEDARALAASEDDADMRAMAEDEARELQAEIDATEQ 95

Query: 103 QFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           + + LL    EADS +A LE+  G GG E+  +A  LL MY R+AE + +K E LE+ + 
Sbjct: 96  RMKVLLLPRDEADSRNAILEIRPGTGGDEAGLFAGDLLAMYRRYAELQGWKFEILEMSEN 155

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           +  G+K  +  I G N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++
Sbjct: 156 DVGGLKEVSAKINGTNVFAALKFESGVHRVQRVPMTESGGRIHTSAATVAVLPEAED-VD 214

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           IEI   D RIDT RASGAGGQHVNTTDSAVRITH+PTG++V  Q ++SQH+N+ +A  +L
Sbjct: 215 IEIKAEDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIV-TQSQKSQHRNREEAMRVL 273

Query: 281 RAKLYELELQKREEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           RA+LYE   + REE  A    + K ++G G    +IR+Y   P   V D R N+      
Sbjct: 274 RARLYE---KAREEANAERAANRKGQVGSGDRSERIRTYNY-PQGRVSDHRINLTLHKLD 329

Query: 337 DVLDGD 342
            ++ GD
Sbjct: 330 RIVAGD 335


>gi|222152015|ref|YP_002561175.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
 gi|254790887|sp|B9E8G1|RF1_MACCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222121144|dbj|BAH18479.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
          Length = 358

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 194/345 (56%), Gaps = 13/345 (3%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD    V QR   LN    DP +  +  + +   +E+  L   +      KE++ +L +
Sbjct: 1   MFDQLEIVEQRYEQLNELLSDPDIVSDTDKLREYSKEQADLQETVEVYREYKEVKQQLEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
            L ++  A + D+  +++E  + L+    E+E +    L+  +  D  +  +E+   AGG
Sbjct: 61  ALEMMGEASDADEQEMIKEEINTLKPQIPELEERMKLLLIPKDPMDDKNVVMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R++E++ +K E +E ++ +  G K  + +I G  AY  LK E G 
Sbjct: 121 DEANIFAGDLFRMYSRFSEEQGWKIEVMETNEADHGGFKEISFIIIGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS +++ V P V+D +EIEI + D RI+TYR+SG+GGQHVNTTD
Sbjct: 181 HRVQRIPTTESGGRIHTSTATVAVLPEVED-VEIEIRQEDLRIETYRSSGSGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+V     E+SQ KN+ +A  +L+ ++++ +LQ  EE A   E  K+ +G
Sbjct: 240 SAVRITHIPTGIVA-TSSEKSQIKNREKALKLLKTRVFDAKLQ--EEQAKYSEQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    +IR+Y   P   V D R  +       +++G L + + A
Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLGEIIDA 340


>gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848773|gb|EDK25691.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 356

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/332 (36%), Positives = 196/332 (59%), Gaps = 17/332 (5%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-Q 86
           ++P +  + +  + LM+E+  L     A +  K+ +  + D+L +LE   +E+   +  +
Sbjct: 20  QEPGVADDPVRFRKLMKEQSDLAPIVEAYNEYKQCRQNIEDSLAMLEEESDEEMRELAKE 79

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143
           E SD+ +R++   E +Q   +L    D ND     +E+ AGAGG E+  +A  + RMY  
Sbjct: 80  ELSDSRKRVE---ELEQELKILLLPKDPNDDKNVIVEIRAGAGGDEAALFAAEIYRMYVH 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +A+ R++KTE + +++    G K    +I G  AY  LK E GVHR+ R+   +S  R H
Sbjct: 137 YADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRLKYESGVHRVQRVPETESGGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ + P  ++ +++ I E D RID  RASG GGQ VNTTDSAVR+TH PTG+V+  
Sbjct: 197 TSTITVAIMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYS 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQ +NK +A+ +LR+KLY+LEL+K++  A+  E+ +++IG G    +IR+Y   P 
Sbjct: 256 QTEKSQLQNKEKAFRLLRSKLYDLELEKQQ--ASEAEARRSQIGTGDRSEKIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             V D R  +       +L+GDLD+ + + +A
Sbjct: 313 GRVTDHRIKLTLHKLDTILNGDLDEIIDSLIA 344


>gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis
           PHE/MN1-00]
 gi|119361555|sp|Q1MSG7|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 359

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/276 (38%), Positives = 165/276 (59%), Gaps = 11/276 (3%)

Query: 81  DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  I +   + +++++LE+ + ++E     L     D  +  LE+ AG GG E+  +A  
Sbjct: 69  DPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGEEAALFAAD 128

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+AEK  +K E +   D +  G K    LI+G N Y  LK E G HR+ R+   
Sbjct: 129 LFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTHRVQRVPTT 188

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P  +D ++IEI   + R D +R+SG GGQ VNTTDSAVR+THIP
Sbjct: 189 ESQGRIHTSAATVAVLPEAED-VDIEIRPEELRFDVFRSSGPGGQSVNTTDSAVRVTHIP 247

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV CQ E+SQHKNKA+A  +L ++L +++ Q+++EI    ++ +  +G G    +IR
Sbjct: 248 TGIVVTCQDEKSQHKNKAKALKVLSSRLLQIK-QEQQEIEQ-ADARRALVGSGDRSERIR 305

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   V D R N+   S   V++G++ +F+ A
Sbjct: 306 TYNF-PQGRVTDHRINLTLYSLIKVMEGEIQEFIDA 340


>gi|255083621|ref|XP_002508385.1| predicted protein [Micromonas sp. RCC299]
 gi|226523662|gb|ACO69643.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/283 (40%), Positives = 171/283 (60%), Gaps = 18/283 (6%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
           + V+ A   ++ER+H     S  + I +    +  + ++A  ED+ + L+ET+  L+   
Sbjct: 45  ERVVRAYAAVKERRH--ETASLEQVIAESAGVDAEMAQMA--EDELATLEETTPALE--- 97

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
              E      L + EAD +   LEV AGAGG E+  +A  LLRMY  +A K  ++ E + 
Sbjct: 98  ---ETLAHLLLPADEADDSGVILEVRAGAGGDEAALFAADLLRMYEMFARKTGWRFELVA 154

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
            +  E  G+K AT  + G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  +
Sbjct: 155 ANASEAGGVKEATASLAGDDVYGRLKFESGVHRVQRVPATETQGRVHTSTASVAVLPQAE 214

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            ++E++I + D +IDT RASGAGGQHVNTT+SAVRITH+PTGV V  Q ERSQHKNK +A
Sbjct: 215 -TVELDIRDDDLKIDTMRASGAGGQHVNTTNSAVRITHVPTGVTVVMQDERSQHKNKEKA 273

Query: 277 WNMLRAKLYELELQKREEIANI-GESSKTEIGWG---RQIRSY 315
             +LRA++YELE   R ++A+   +  ++ IG G    ++R+Y
Sbjct: 274 MKVLRARVYELE---RRKLADARADQRRSLIGSGDRSERVRTY 313


>gi|206580278|ref|YP_002237908.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288934821|ref|YP_003438880.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|290508964|ref|ZP_06548335.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
 gi|238058716|sp|B5XW51|RF1_KLEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206569336|gb|ACI11112.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288889530|gb|ADC57848.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|289778358|gb|EFD86355.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
          Length = 360

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++EV AG GG E+  +A  L RMY+R+AE R+++ E L  ++GE  G K      
Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKF 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|238026092|ref|YP_002910323.1| peptide chain release factor 1 [Burkholderia glumae BGR1]
 gi|237875286|gb|ACR27619.1| Peptide chain release factor 1 [Burkholderia glumae BGR1]
          Length = 360

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG ES  +A  LLRMY R+AE+++++ E +     +  G K   + I
Sbjct: 107 DDRNIFVEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESGSDLGGYKEVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGHGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQHAREAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELI-A 342

Query: 350 TLA 352
           +LA
Sbjct: 343 SLA 345


>gi|207744458|ref|YP_002260850.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
 gi|206595864|emb|CAQ62791.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
          Length = 356

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 223 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   V D R N+       ++DGDLD+ +  
Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 338

Query: 350 TLA 352
           TLA
Sbjct: 339 TLA 341


>gi|153854177|ref|ZP_01995485.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
 gi|149753226|gb|EDM63157.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
          Length = 358

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/273 (40%), Positives = 165/273 (60%), Gaps = 13/273 (4%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142
           +E +DN +R++   E +Q   +L    D ND     +E+ AGAGG E+  +A  + RMY 
Sbjct: 79  EELNDNKKRVE---ELEQELKILLLPKDPNDEKNVIVEIRAGAGGDEAALFAAEIYRMYM 135

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +AE +++K E +E  +    G+K+ T +I G  AY  +K E GVHR+ R+   +S  R 
Sbjct: 136 HYAESQRWKVELVECEEIGIGGMKNVTFMIDGKGAYSKMKYESGVHRVQRVPETESGGRI 195

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  ++ V P  +D ++I+I E D RID  RASG GGQ VNTTDSAVR+TH PTG+V+ 
Sbjct: 196 HTSTITVAVMPEAED-VDIQIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIY 254

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
            Q E+SQ +NK +A+ +LRAKLY+LE QKR +     E+ K++IG G    +IR+Y   P
Sbjct: 255 SQTEKSQLQNKDKAFALLRAKLYDLECQKRHDAE--AEARKSQIGTGDRSEKIRTYNF-P 311

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              V D R  +       +++GD+ + + A +A
Sbjct: 312 QGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIA 344


>gi|298292694|ref|YP_003694633.1| peptide chain release factor 1 [Starkeya novella DSM 506]
 gi|296929205|gb|ADH90014.1| peptide chain release factor 1 [Starkeya novella DSM 506]
          Length = 365

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 159/272 (58%), Gaps = 17/272 (6%)

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
           AL E++ + L+E  + L   ++L        +LL  +A D     LEV AG GG E+  +
Sbjct: 77  ALAEEEVASLEEQVETLTHAVRL--------ALLPKDAMDERGVILEVRAGTGGDEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+A    +  E L + +G   G K     + G  AY  LK E GVHR+ R+
Sbjct: 129 AGDLFRMYERFAGLNGWSVEVLSLTEGTAGGFKEIVAALHGSGAYAKLKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS +++ V P V+D ++I I+ESD RID +RASGAGGQHVN T+SAVRIT
Sbjct: 189 PETEGSGRIHTSAATVAVLPEVED-VDIAINESDLRIDVFRASGAGGQHVNKTESAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV  Q ERSQHKNKA+A  MLRA++YE E +KR+  A   E  K ++G G    
Sbjct: 248 HLPTGTVVAVQDERSQHKNKARAMGMLRARIYEAEREKRDS-ARASE-RKVQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +IR+Y   P   V D R  +      ++L G+
Sbjct: 306 RIRTYNF-PQGRVTDHRIGLTLHKLPEILSGE 336


>gi|57238625|ref|YP_179756.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|73621534|sp|Q5HSH9|RF1_CAMJR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57167429|gb|AAW36208.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|315059063|gb|ADT73392.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 355

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/221 (45%), Positives = 139/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AGAGG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGAGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|33519808|ref|NP_878640.1| peptide chain release factor 1 [Candidatus Blochmannia floridanus]
 gi|81666793|sp|Q7VR74|RF1_BLOFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33504153|emb|CAD83415.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           floridanus]
          Length = 358

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 167/279 (59%), Gaps = 17/279 (6%)

Query: 79  EDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +D+  IL  +  NL+ +IK+         L S   D  + ++E+ AG GG E+  +A  L
Sbjct: 78  QDELKILNTSKHNLENKIKI--------LLFSDPQDQYNCFIELRAGTGGKEAAIFAGEL 129

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+ E +++  E +    GE  G K   + +    +YG LK E G HR+ RI   +
Sbjct: 130 FRMYSRYIEMQRWNMEIIHATYGECGGYKEIIIKVPVHGSYGQLKFESGGHRVQRIPNTE 189

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  +I V P + ++I  EI+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+
Sbjct: 190 SQGRIHTSTCTIAVIPNIPNAILPEINSNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG---RQIR 313
           G+ V+CQ ERSQHKNK++A ++L+++LY + + QK++E +N+    +  IG G    +IR
Sbjct: 250 GLSVECQDERSQHKNKSKALSVLKSRLYAINIKQKQQEESNV---RRNLIGTGDRSDRIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y  Q  + V D R         D+++G LD  ++  + 
Sbjct: 307 TYNFQQGR-VTDHRIAFTSYKLHDIMNGKLDILIQPIMC 344


>gi|207721782|ref|YP_002252220.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
 gi|206586946|emb|CAQ17530.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
          Length = 356

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 223 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   V D R N+       ++DGDLD+ +  
Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 338

Query: 350 TLA 352
           TLA
Sbjct: 339 TLA 341


>gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
 gi|81558450|sp|Q5LQM7|RF1_SILPO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56679049|gb|AAV95715.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
          Length = 351

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/295 (40%), Positives = 166/295 (56%), Gaps = 14/295 (4%)

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYK-QFESLLSGEADSNDAYLEVH 122
           +LC ++      L + D   L E    L + +L E E   Q   L    AD+  A LE+ 
Sbjct: 52  QLCADMDEARAMLSDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIR 111

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+  +A  LLRMY R+AE R +K E +E+ + E  GIK     I G N +  LK
Sbjct: 112 PGTGGDEAALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLK 171

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS +++ V P   D ++I+I   D RIDT R+SGAGGQH
Sbjct: 172 YESGVHRVQRVPETESGGRIHTSAATVAVLPEAQD-VDIQIDPGDIRIDTMRSSGAGGQH 230

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK--REEIANIGE 300
           VNTTDSAVRITH+P+G+VV    E+SQH+N+  A  +L+ +LY+LE Q+  RE  A    
Sbjct: 231 VNTTDSAVRITHLPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQRLDRERSA---- 285

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S   ++G G    +IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 286 SRSAQVGTGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAA 339


>gi|300702903|ref|YP_003744504.1| peptide chain release factor rf-1 [Ralstonia solanacearum CFBP2957]
 gi|299070565|emb|CBJ41860.1| peptide chain release factor RF-1 [Ralstonia solanacearum CFBP2957]
          Length = 356

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 223 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   V D R N+       ++DGDLD+ +  
Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 338

Query: 350 TLA 352
           TLA
Sbjct: 339 TLA 341


>gi|167754864|ref|ZP_02426991.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|237735404|ref|ZP_04565885.1| peptide chain release factor 1 [Mollicutes bacterium D7]
 gi|167704914|gb|EDS19493.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|229381149|gb|EEO31240.1| peptide chain release factor 1 [Coprobacillus sp. D7]
          Length = 358

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 147/242 (60%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+   AGG E   +A  L RMY ++AE + +K E +E  D E  G    + ++
Sbjct: 109 DNKDVIMEIRGAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMEAVDAEAGGYSLISFMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + YG LK E G HR+ R+   ++  R HTS +++ V P +++ +++EI++SD RIDT
Sbjct: 169 KGEDVYGKLKFESGSHRVQRVPKTETQGRVHTSTATVLVMPEMEE-VDVEINKSDLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH+PTG+V   Q  RSQH NK +A   L +++Y+   Q+ 
Sbjct: 228 YRASGAGGQHINKTDSAVRITHLPTGIVAASQDGRSQHDNKDKAMKALVSRIYDFYQQQH 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +G   K+++G G    +IR+Y   P   V D R  +       ++DG LDD + A
Sbjct: 288 DE--QVGSERKSKVGSGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDRIVDGKLDDIITA 344

Query: 350 TL 351
            +
Sbjct: 345 LI 346


>gi|15890803|ref|NP_356475.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
 gi|22096038|sp|Q8U8B8|RF1_AGRT5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15159088|gb|AAK89260.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
          Length = 360

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A  + +K E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   +++ R HTS +++ V P  +D I++EI   D RID
Sbjct: 167 ITGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAED-IDVEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+A+A  +LR++LY++E QK
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGLIV-TSSEKSQHQNRAKAMQVLRSRLYDIERQK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       V++G++D+ + 
Sbjct: 285 VD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEIDELVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALIA 345


>gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera sp. 301]
 gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera sp. 301]
          Length = 360

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/311 (39%), Positives = 174/311 (55%), Gaps = 20/311 (6%)

Query: 48  ERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           E+ HL + A + IKE Q  L D   + E A EE +            + KLE   K  + 
Sbjct: 50  EQYHLFEQAEADIKEAQSMLSDP-DMKEFAQEEIEAG----------KEKLEQVEKSLQV 98

Query: 107 LL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           LL      D  + +LE+ AG GG ES  +   L RMY+R+AEK+K+K E +  ++ E  G
Sbjct: 99  LLLPKDPNDDKNLFLEIRAGTGGDESGLFCGDLFRMYSRYAEKQKWKVEIMSANESEVGG 158

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     I+G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  ++ I+
Sbjct: 159 YKEIIAKIEGYGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAVLPEADEVSDVVIN 218

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV+CQ+ RSQH NKAQA  +L A++
Sbjct: 219 PADIRIDTYRASGAGGQHINKTDSAVRITHAPTGIVVECQEGRSQHANKAQAMAVLAARI 278

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              ++   E+ + I    K+ IG G    +IR+Y   P   + D R N+       + +G
Sbjct: 279 KAKQVD--EQNSKIASERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEG 335

Query: 342 DLDDFMKATLA 352
           D+D+ + A  A
Sbjct: 336 DMDELIGALSA 346


>gi|332526537|ref|ZP_08402649.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
 gi|332110805|gb|EGJ10982.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
          Length = 351

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 187/336 (55%), Gaps = 16/336 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ L+    DP +  +V   + L RE+  + + +   +    R  D     E+ + E D
Sbjct: 2   RLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQDLAAAREMLVAESD 61

Query: 82  CSIL----QETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +     QE  D   +L R++ E+   Q   +     D+ +A++E+ AG GG ES  +A
Sbjct: 62  AEMAAMAEQEVVDAEADLARLEHEL---QLALIPRDPDDARNAFVEIRAGTGGDESALFA 118

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+ E++ ++ E +   + E  G K   L + G + +G L+ E G HR+ R+ 
Sbjct: 119 GDLARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGTDVFGTLRFESGGHRVQRVP 178

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++ E++++ ++ RIDT+RASGAGGQHVN TDSA+RITH
Sbjct: 179 ATEAQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHVNKTDSAIRITH 238

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ +RSQH+NKA+A  +L A+L E +  +R        + K+ +G G    +
Sbjct: 239 LPTGIVAECQDDRSQHRNKAKAMAVLAARLREKDRAERAAKEA--ATRKSLVGSGDRSDR 296

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           IR+Y   P   + D R N+       ++DG+LDD +
Sbjct: 297 IRTYNF-PQGRLTDHRINLTLYKLGQIMDGELDDVV 331


>gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
 gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
          Length = 358

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 191/346 (55%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKSKKEELED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L    ++++  +L+E S  L+    ++E ++ + LL      D  D  +E+ A AG
Sbjct: 61  IEEMLRETSDKEEVEMLKEESTALKNELPDME-EELKILLIPKDPNDEKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGVV     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVVA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +       +++G LD+ + A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLDEIIDA 340


>gi|227499754|ref|ZP_03929854.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
 gi|227218140|gb|EEI83406.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
          Length = 358

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/335 (35%), Positives = 189/335 (56%), Gaps = 13/335 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82
           L  K  DP +  ++     + RE   L   +    +I+D    + +N  L+  A ++D  
Sbjct: 15  LEKKMIDPEVLADISRLTKITREYNSLKPIVEKYDQIKDAESTIEENKELINEADDQDMI 74

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L+E     +++ L+   ++ + LL      DS D  +E+  GAGG E+  +A  L RM
Sbjct: 75  DMLKEEIKENEKL-LDQYNEEMKILLIPKDPNDSRDVIVEIRPGAGGDEAGLFAGDLYRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y  +A+K  +KTE +E+      GIK AT +++G  AY   K E GVHR+ R+   +S  
Sbjct: 134 YHMYADKEGYKTEDVEVTPQGVGGIKDATFMVRGEGAYSRFKYESGVHRVQRVPETESGG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P VD+ +++ +  +D R D +R+SG GGQ VNTTDSAVR+THIPTG+V
Sbjct: 194 RIHTSTATVAVLPEVDE-LDVHVDPNDIRTDVFRSSGNGGQSVNTTDSAVRLTHIPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V  Q E+SQ KNK +A  +L A++YELE +KR +   I ++ K+++G G    +IR+Y  
Sbjct: 253 VSMQDEKSQIKNKEKAMKILLARIYELEEEKRNK--EIADNRKSQVGTGDRSERIRTYNF 310

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   + D R N       D L+G + + + + +A
Sbjct: 311 -PQGRITDHRINKTIYQLDDFLNGGIGEMIDSLIA 344


>gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 337

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 184/330 (55%), Gaps = 13/330 (3%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L+ L+ +  +  LW +   AK +M +   +   +      +D+L D    LE+  ++   
Sbjct: 10  LADLDKRASEATLWDDPKNAKAVMEQLADVREQLELAAAFEDKLGDARTALEMIADDPSS 69

Query: 83  SIL----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            ++     E SD +  ++  +E  +   LL G  D+  A + ++AG GG ++ +WA  L 
Sbjct: 70  DVVPELASEISDAIASLEAALETWETRRLLVGTYDALGATVFINAGFGGFDAHEWAERLE 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             Y  WA +R F         GEE G++S TL I G  AYG+L  E+G HR+VRI     
Sbjct: 130 SCYVAWARRRGFAVRVEARTPGEEVGLRSVTLEIDGRFAYGYLASEKGAHRMVRIGGVAG 189

Query: 199 NSR--RHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
            +   RH++F ++ V P +++   SI     +    I T R+ GAGGQ+VN  ++AVR+ 
Sbjct: 190 QTPRGRHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVNKVETAVRMK 249

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQ 311
           H+PTG+VV+C++ERSQ  N+A+A   L+AKL  +  ++R  ++A + G+  + E   G+Q
Sbjct: 250 HLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVRAE--RGQQ 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           IR+YVL PY++VKD+RT +E +    VL G
Sbjct: 308 IRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337


>gi|168237830|ref|ZP_02662888.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197289243|gb|EDY28610.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 360

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A ++  E  KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGACIHAAETAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|291166475|gb|EFE28521.1| peptide chain release factor 1 [Filifactor alocis ATCC 35896]
          Length = 354

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 151/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A +L RMY+ +A  R +K E +  ++    G K    +I
Sbjct: 106 DEKNVIVEIRGGAGGDEAALFAGVLFRMYSMYASARNWKVEMMSANETGIGGYKEVVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S+ R HTS S++ V P VDD +E+E+  +D R+D 
Sbjct: 166 TGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTSTVAVLPEVDD-VEVELDMNDVRVDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ KNK +A+ +L+AKLY+LEL+K 
Sbjct: 225 FRSSGNGGQSVNTTDSAVRLTHKPTGIVISMQDEKSQLKNKEKAFKILKAKLYDLELEKA 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   + +  K+++G G    +IR+Y   P   V D R  +      + L+GD+D+ + A
Sbjct: 285 QK--ELAQERKSQVGSGDRSERIRTYNY-PQGRVTDHRIGLTLYKLENFLNGDIDEILDA 341

Query: 350 TLA 352
            + 
Sbjct: 342 LIT 344


>gi|259908618|ref|YP_002648974.1| peptide chain release factor 1 [Erwinia pyrifoliae Ep1/96]
 gi|224964240|emb|CAX55747.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae Ep1/96]
          Length = 360

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  +A  L RMY+R+AE R++K E +  ++GE  G K     +
Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT
Sbjct: 167 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286

Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++     E S T    +G G +    R+Y   P   V D R N+      + ++G LD  
Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340

Query: 347 MKATL 351
           ++  +
Sbjct: 341 IEPIV 345


>gi|239817175|ref|YP_002946085.1| peptide chain release factor 1 [Variovorax paradoxus S110]
 gi|259585259|sp|C5CXW3|RF1_VARPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239803752|gb|ACS20819.1| peptide chain release factor 1 [Variovorax paradoxus S110]
          Length = 362

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 150/246 (60%), Gaps = 6/246 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A+LE+ AG GG ES  +A  LLRMYTR+ E+  ++ E +   + E  G K   + I
Sbjct: 107 DARNAFLEIRAGTGGDESALFAGDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +G L+ E G HR+ R+   ++  R HTS  ++ V    D+++ ++I+ +D RIDT
Sbjct: 167 AGNDVFGRLRFESGGHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+V +CQ +RSQH+NKA+A  +L A++ E +  + 
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKD--RS 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K  IG G    +IR+Y   P   + D R N+       +++GDL D + A
Sbjct: 285 ERAAKDAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLQAIMEGDLGDVLDA 343

Query: 350 TLAIKK 355
             A ++
Sbjct: 344 LRAARE 349


>gi|90022891|ref|YP_528718.1| peptide chain release factor 1 [Saccharophagus degradans 2-40]
 gi|119361599|sp|Q21FM3|RF1_SACD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89952491|gb|ABD82506.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharophagus
           degradans 2-40]
          Length = 360

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 145/239 (60%), Gaps = 6/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+R+AE + +K E +  + GE  G K     +
Sbjct: 109 DGKNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAESKGWKVEIISENQGEHGGYKEIITRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+  E+ I+++D RIDT
Sbjct: 169 VGQGVYSELKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADEMAEVNINKADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L ++L     Q+ 
Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSLLASRLS--MAQEE 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +  A    + K+ +G G    +IR+Y   P   V D R N+      +V+ G L D ++
Sbjct: 287 KAAAEQASARKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVMQGALGDVIQ 344


>gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
 gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
          Length = 362

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/284 (40%), Positives = 165/284 (58%), Gaps = 12/284 (4%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123
           DN+  LE  L  +D  +     + L   K +VE      Q+  +     D  + YLE+ A
Sbjct: 60  DNVSSLEELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L RMY R+AE++ ++ E +    GE  G K     I G   Y  LK 
Sbjct: 120 GTGGDEAAIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKF 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHV
Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESS 302
           N TDSA+RITHIPTGVVV+CQ ERSQHKN+++A ++L+ +L + E  K R+E A   ++ 
Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQA---QTR 296

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           K+ +G G    +IR+Y   P   + D R N+     +DV++G L
Sbjct: 297 KSLVGTGDRSERIRTYNY-PQGRLTDHRINLTIYQLNDVMEGKL 339


>gi|161526057|ref|YP_001581069.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189349228|ref|YP_001944856.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|238687082|sp|A9AJ68|RF1_BURM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160343486|gb|ABX16572.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189333250|dbj|BAG42320.1| peptide chain release factor RF-1 [Burkholderia multivorans ATCC
           17616]
          Length = 360

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 9/261 (3%)

Query: 96  KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +LEVE ++   LL  +  D  + ++E+ AG GG ES  +A  LLRMY R+AE+++++ E 
Sbjct: 91  RLEVELQKM--LLPKDPNDDRNIFVEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEM 148

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +     +  G K   + I G  AY  LK E G HR+ R+   ++  R HTS  ++ V P 
Sbjct: 149 MSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPE 208

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK 
Sbjct: 209 ADEIGEVEINLADLRIDTFRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKD 268

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +L A++   + Q  E+ A    + K+ IG G    +IR+Y   P   + D R N+ 
Sbjct: 269 RALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLT 325

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
                 ++DGDLD+ + A ++
Sbjct: 326 LYRLEAIMDGDLDELIGALVS 346


>gi|311109118|ref|YP_003981971.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310763807|gb|ADP19256.1| peptide chain release factor 1 [Achromobacter xylosoxidans A8]
          Length = 360

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/246 (42%), Positives = 149/246 (60%), Gaps = 9/246 (3%)

Query: 113 DSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D ND    +LE+ AG GG ES  ++  LLRMYTR+AE+R ++ E +     E  G K   
Sbjct: 104 DPNDGRSLFLEIRAGTGGDESALFSGDLLRMYTRYAEQRGWRVELMSESASELGGYKEVI 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AYG LK E G HR+ R+   ++  R HTS  ++ +    D+  EI I+ +D R
Sbjct: 164 ARIDGDGAYGRLKFESGAHRVQRVPATEAQGRIHTSACTVAIMAEADEMSEIVINPNDLR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + E 
Sbjct: 224 IDTFRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKET 283

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++R+  +      K+ IG G    +IR+Y   P   V D R N+       +++GDL++ 
Sbjct: 284 RERQ--SKEAAERKSLIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEEL 340

Query: 347 MKATLA 352
             A +A
Sbjct: 341 TGALIA 346


>gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
 gi|226739102|sp|B5YDB2|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
          Length = 367

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 148/238 (62%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L RMY  +A+K+ +K E +  +     G K    ++
Sbjct: 111 DEKNIIMEIRAGTGGEEAALFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S+ R HTS +++ V P +++ +++EI   D RI+T
Sbjct: 171 EGKGAYSRLKFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEE-VDVEIDPKDLRIET 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ GAGGQHVN T+S VRITHIP+G+VVQCQ ERSQH+N+ +A  +LRA+LY  E  +R
Sbjct: 230 FRSGGAGGQHVNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLY--EYYQR 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E+   I    + ++G G    +IR+Y   P + V D R N       +VL G+LD+F+
Sbjct: 288 EKENEIASQRRQQVGTGERSEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFI 344


>gi|283478591|emb|CAY74507.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 363

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  +A  L RMY+R+AE R++K E +  ++GE  G K     +
Sbjct: 110 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKV 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT
Sbjct: 170 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R
Sbjct: 230 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 289

Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++     E S T    +G G +    R+Y   P   V D R N+      + ++G LD  
Sbjct: 290 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 343

Query: 347 MKATL 351
           ++  +
Sbjct: 344 IEPIV 348


>gi|83747499|ref|ZP_00944537.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
 gi|83725813|gb|EAP72953.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
          Length = 374

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 121 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 180

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 181 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 240

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 241 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 298

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   V D R N+       ++DGDLD+ +  
Sbjct: 299 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 356

Query: 350 TLA 352
           TLA
Sbjct: 357 TLA 359


>gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
 gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
          Length = 351

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/284 (40%), Positives = 165/284 (58%), Gaps = 12/284 (4%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123
           DN+  LE  L  +D  +     + L   K +VE      Q+  +     D  + YLE+ A
Sbjct: 49  DNVSSLEELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRA 108

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L RMY R+AE++ ++ E +    GE  G K     I G   Y  LK 
Sbjct: 109 GTGGDEAAIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKF 168

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHV
Sbjct: 169 ESGAHRVQRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHV 228

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESS 302
           N TDSA+RITHIPTGVVV+CQ ERSQHKN+++A ++L+ +L + E  K R+E A   ++ 
Sbjct: 229 NKTDSAIRITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQA---QTR 285

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           K+ +G G    +IR+Y   P   + D R N+     +DV++G L
Sbjct: 286 KSLVGTGDRSERIRTYNY-PQGRLTDHRINLTIYQLNDVMEGKL 328


>gi|114768932|ref|ZP_01446558.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
 gi|114549849|gb|EAU52730.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
          Length = 351

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/335 (37%), Positives = 188/335 (56%), Gaps = 12/335 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R  +L  K  D      V E   L +E   L   +  I+  +  L D     E+ L+ + 
Sbjct: 13  RFDYLEAKMAD---GSAVDEIAKLSKEYSDLKPVVDQIENYKATLLDISEAEEMLLDPEL 69

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + +E   NL+     +E+K   SLL   EAD   A +E+ AG GG E+  +A  LLRM
Sbjct: 70  KVLAEEELPNLKEKLPILEHKLLLSLLPKDEADDKPAIIEIRAGTGGDEAALFAGDLLRM 129

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+ E + +K E +E ++ E  G K A + +KG   +  LK E GVHR+ R+   +S  
Sbjct: 130 YNRFCEDQGWKFEIVEGNETELGGYKEAIINVKGVGVFARLKYESGVHRVQRVPTTESGG 189

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ + P  ++ I++EI  +D R+DTYR+SGAGGQHVNTTDSAVRITH+PTG++
Sbjct: 190 RVHTSAATVAIMPEAEN-IDLEIPTTDIRLDTYRSSGAGGQHVNTTDSAVRITHLPTGLI 248

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V    E+SQH+N+  A N+LR +LY  +LQ+++       + K ++G G    +IR+Y  
Sbjct: 249 V-TSSEKSQHRNREIAMNVLRTRLY--DLQRQQAADERAATRKDQVGSGDRSERIRTYNF 305

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   V D R N+       V+ GDL++F+ A  A
Sbjct: 306 -PQGRVSDHRINLTLYKLDQVMQGDLNEFIDALTA 339


>gi|51891211|ref|YP_073902.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
 gi|81610729|sp|Q67TD5|RF1_SYMTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51854900|dbj|BAD39058.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
          Length = 356

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/345 (36%), Positives = 185/345 (53%), Gaps = 19/345 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +  VQR   L  K  DP +  N  E + + RE   L   +   +  Q     L D L +
Sbjct: 5   LEGVVQRYEDLTYKLGDPSVINNPTEYRQVAREHNRLGPIVEKFRAYQKTERELDDVLEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
           LE  L+ ++ ++  +   +L+  KL+    +   LL      D  +  +E+ AGAGG E+
Sbjct: 65  LEGPLDPEERALFNQELRDLKE-KLQTLSDELRILLLPRDPNDDKNVIMEIRAGAGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYTR AE+ K+KTE L I + E  GIK     I    AY  LK E GVHR+
Sbjct: 124 SLFAAELFRMYTRLAERHKWKTEVLSISENEAGGIKEVLFQINAEGAYSRLKYEGGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P +++ ++IEI   D +I+  RA GAGGQHVN T+SAV
Sbjct: 184 QRVPVTESQGRIHTSTVTVAVMPEMEE-VDIEIKPEDLKIEVQRAGGAGGQHVNKTESAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--YELELQKREE----IANIGESSKT 304
           R+TH+PTG+VV C  ERSQ +N+ +A  +LRA++  Y  +  K EE     A +G   ++
Sbjct: 243 RMTHLPTGIVVYCADERSQMQNREKALRVLRARVADYYAQQAKSEEEQLRRAQVGTGERS 302

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E     +IR+Y   P   V D R  +   + + V+DG++D  + A
Sbjct: 303 E-----KIRTYNF-PQDRVTDHRIGLTVHNIAAVMDGEIDHIIDA 341


>gi|295094043|emb|CBK83134.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus sp.
           ART55/1]
          Length = 358

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 198/356 (55%), Gaps = 28/356 (7%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD------- 64
           +FD  +  V +L  +N +  DP +  +  + + LM+E+  L   +    E +D       
Sbjct: 1   MFDRLEELVDKLDTINNQLTDPDVVSDQNKFRKLMKEQSDLSPIVEKYHEYKDAKTTIED 60

Query: 65  -----RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
                    +  L E+A EE     + E   NL+ I+ E+   +   L     DS +  +
Sbjct: 61  SLEILEEESDEELREMAKEE-----MNEAKANLETIEQEL---KILLLPKDPNDSKNVIV 112

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AGAGG E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY 
Sbjct: 113 EIRAGAGGDEAALFAYEVYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYS 172

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            +K E GVHR+ RI   +S  R HTS  ++ V P  ++ +++EI+E+D RID  RASG G
Sbjct: 173 KMKYESGVHRVQRIPKTESGGRIHTSTITVAVMPEAEE-VDVEINENDIRIDVMRASGNG 231

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +     
Sbjct: 232 GQCVNTTDSAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAE--A 289

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +++IG G    +IR+Y   P   V D R  +       +++GDL++ + + +A
Sbjct: 290 ADRRSQIGTGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIA 344


>gi|329888688|ref|ZP_08267286.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
 gi|328847244|gb|EGF96806.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
          Length = 345

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/281 (41%), Positives = 163/281 (58%), Gaps = 16/281 (5%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134
           AL  D+   L E    L+R   EV       L   +AD N  A LEV AG GG E+  +A
Sbjct: 62  ALASDELDALTERLPTLER---EVALL----LAPRDADENASAVLEVRAGTGGDEAALFA 114

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+A+ R ++ E     +G+  G K     + G   +G LK E GVHR+ R+ 
Sbjct: 115 GDLFRMYSRYAQSRGWRVEIDSAAEGDAGGFKEIIATVSGEGVFGRLKFESGVHRVQRVP 174

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS ++I V P V+D +EIEI + D RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 175 TTEAGGRIHTSAATIAVLPEVED-VEIEILDKDIRIDTYRSSGAGGQHVNKTDSAVRITH 233

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V     E+SQH N+ +A   LR +LY+++ Q ++  A   ++ K+++G G    +
Sbjct: 234 LPTGIVA-TSSEKSQHVNRDKAMKNLRVRLYDMQRQAKD--AARSDARKSQVGSGDRSER 290

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R  +   S   +L+GDLD  + A +A
Sbjct: 291 IRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIA 330


>gi|238810252|dbj|BAH70042.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 373

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 32/350 (9%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK--EIQDRLCDNLIL 72
           +DN V++L       +D  +  N+ E   + +E   + D A +F K   +Q+   D  ++
Sbjct: 31  YDNLVKKL-------DDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 83

Query: 73  LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +    EE+     SI++E    L +++ E+   +   L   E D  +  +E+   AGG E
Sbjct: 84  INSKNEEEVLFAKSIIEENEVKLAQLEEEL---KILILPKDENDDKNVIMEIRGAAGGDE 140

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVHR
Sbjct: 141 ANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHR 200

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDSA
Sbjct: 201 VQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSA 260

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESS 302
           VRITH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++       +A  G+ S
Sbjct: 261 VRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRS 320

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +       +IR+Y   P   V D R     TS   V++G L   ++A L 
Sbjct: 321 E-------KIRTYNY-PQDRVTDHRIGYS-TSLKQVMEGKLLTIIEALLT 361


>gi|85711946|ref|ZP_01043000.1| Protein chain release factor A [Idiomarina baltica OS145]
 gi|85694132|gb|EAQ32076.1| Protein chain release factor A [Idiomarina baltica OS145]
          Length = 362

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/295 (37%), Positives = 170/295 (57%), Gaps = 11/295 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----ETSDNLQRIKLE 98
           + L +E   L+  +S     +    D     E+A ++DD  + +    E +D  QR++  
Sbjct: 36  RSLSKEYAQLEEVVSAFNSYRQAQSDLTAAHEMA-DDDDPEMREMANEEIADAKQRVESL 94

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
               Q   L     D    YLE+ AGAGG E+  +A  L RMY+R+AE+  ++   +  +
Sbjct: 95  ENSLQVLLLPKDPNDDRACYLEIRAGAGGDEAAIFAGDLFRMYSRYAEQHGWRVSTVSAN 154

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +GE  G K     + G   YG +K E G HR+ R+   +S  R HTS  ++ V P + ++
Sbjct: 155 EGEHGGYKEVIAQLSGDGVYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEA 214

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
             IEI+ +D R+DT+RASGAGGQHVN TDSA+RITH+P+GVVV+CQ+ERSQHKN+A+A +
Sbjct: 215 EAIEINPADLRVDTFRASGAGGQHVNRTDSAIRITHLPSGVVVECQEERSQHKNRAKAMS 274

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           +L+++L  +E +KR +      + ++ +G G    +IR+Y   P   V D R N+
Sbjct: 275 VLQSRLQRMEDEKRAQ--EEASTRRSLVGSGDRSERIRTYNY-PQSRVTDHRINL 326


>gi|258592988|emb|CBE69299.1| peptide chain release factor 1 [NC10 bacterium 'Dutch sediment']
          Length = 358

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 151/244 (61%), Gaps = 7/244 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD     LEV AGAGG E+  +A  L+RMY R+AE R +K E L        G+K A L 
Sbjct: 108 ADEKSIILEVRAGAGGDEAALFAAELVRMYGRYAELRGWKVEMLSSSQTGVGGVKEAILS 167

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AY  LK E GVHR+ R+   +S+ R HTS  ++ V P  +D +EI+I   D RID
Sbjct: 168 IEGRGAYSRLKFESGVHRVQRVPVTESSGRIHTSTVTVAVLPEAED-VEIQIDPKDLRID 226

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +R++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQHKN+A+A  +LRA+L  LE   
Sbjct: 227 VFRSTGPGGQSVNTTDSAVRITHLPTGMVVSCQDEKSQHKNRAKAMKVLRARL--LEAAT 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            ++ A I ++ + ++G G    +IR+Y   P   V D R  +   S   +L+G++++ + 
Sbjct: 285 AQQAAEISQARRQQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPRILEGEIEELIG 343

Query: 349 ATLA 352
           A  A
Sbjct: 344 ALAA 347


>gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
          Length = 358

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 192/346 (55%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L    ++++  +L+E S  L+    ++E ++ + LL      D  D  +E+ A AG
Sbjct: 61  IEDMLSETSDKEEVEMLKEESSALKTELPDME-EELKILLIPKDPNDDKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  +D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +     + +++G LD+ ++A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGHLDEIVEA 340


>gi|110635328|ref|YP_675536.1| peptide chain release factor 1 [Mesorhizobium sp. BNC1]
 gi|119361558|sp|Q11E04|RF1_MESSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110286312|gb|ABG64371.1| bacterial peptide chain release factor 1 (bRF-1) [Chelativorans sp.
           BNC1]
          Length = 359

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 152/246 (61%), Gaps = 10/246 (4%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  +A LE+ AG GG E+  +A  L RMY R+A +R ++ E +   +GE  G K    
Sbjct: 106 EADEKNAILEIRAGTGGDEAALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEIIA 165

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +D I+++I   D RI
Sbjct: 166 SVTGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAED-IDVDIKPEDIRI 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+A+A  +LRA+L+++E  
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGIMV-VSAEKSQHQNRARAMQILRARLFDME-- 281

Query: 291 KREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            R   AN   E+ + ++G G    +IR+Y   P   V D R N+       V++G+LD+ 
Sbjct: 282 -RSRAANERSEARRLQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDEV 339

Query: 347 MKATLA 352
           + A +A
Sbjct: 340 IDALIA 345


>gi|319777684|ref|YP_004137335.1| peptide chain release factor 1 [Mycoplasma fermentans M64]
 gi|318038759|gb|ADV34958.1| Peptide chain release factor 1 [Mycoplasma fermentans M64]
          Length = 358

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 32/350 (9%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK--EIQDRLCDNLIL 72
           +DN V++L       +D  +  N+ E   + +E   + D A +F K   +Q+   D  ++
Sbjct: 16  YDNLVKKL-------DDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 68

Query: 73  LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +    EE+     SI++E    L +++ E+   +   L   E D  +  +E+   AGG E
Sbjct: 69  INSKNEEEVLFAKSIIEENEVKLAQLEEEL---KILILPKDENDDKNVIMEIRGAAGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVHR
Sbjct: 126 ANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDSA
Sbjct: 186 VQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESS 302
           VRITH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++       +A  G+ S
Sbjct: 246 VRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRS 305

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +       +IR+Y   P   V D R     TS   V++G L   ++A L 
Sbjct: 306 E-------KIRTYNY-PQDRVTDHRIGYS-TSLKQVMEGKLLTIIEALLT 346


>gi|91786752|ref|YP_547704.1| peptide chain release factor 1 [Polaromonas sp. JS666]
 gi|119361575|sp|Q12F86|RF1_POLSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91695977|gb|ABE42806.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas sp.
           JS666]
          Length = 373

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 12/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+  A++E+ AG GG ES  +A  L RMYTR+AE+ +++ E +     E  G K   L +
Sbjct: 111 DARAAFIEIRAGTGGDESALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRM 170

Query: 173 KGPN------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            GP        YG L+ E G HR+ R+   ++  R HTS  ++ V P  D+++ I+I+ +
Sbjct: 171 DGPTDATGVGVYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEAVAIQINPA 230

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ +RSQH+NKA+A  +L A++ E
Sbjct: 231 DLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIVE 290

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            +  + E  A      K  +G G    +IR+Y   P   + D R N+       +++GDL
Sbjct: 291 KD--RSERAAKDAAMRKGLVGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDL 347

Query: 344 DDFMKA 349
            D + A
Sbjct: 348 GDVITA 353


>gi|308190290|ref|YP_003923221.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
 gi|307625032|gb|ADN69337.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
          Length = 371

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 32/350 (9%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK--EIQDRLCDNLIL 72
           +DN V++L       +D  +  N+ E   + +E   + D A +F K   +Q+   D  ++
Sbjct: 29  YDNLVKKL-------DDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 81

Query: 73  LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +    EE+     SI++E    L +++ E+   +   L   E D  +  +E+   AGG E
Sbjct: 82  INSKNEEEVLFAKSIIEENEVKLAQLEEEL---KILILPKDENDDKNVIMEIRGAAGGDE 138

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVHR
Sbjct: 139 ANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHR 198

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDSA
Sbjct: 199 VQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSA 258

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESS 302
           VRITH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++       +A  G+ S
Sbjct: 259 VRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRS 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +       +IR+Y   P   V D R     TS   V++G L   ++A L 
Sbjct: 319 E-------KIRTYNY-PQDRVTDHRIGYS-TSLKQVMEGKLLTIIEALLT 359


>gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1]
          Length = 358

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 175/343 (51%), Gaps = 24/343 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  + ++A+ L +    L   +   +++     D     ELA E  D S  
Sbjct: 16  LEQRLADPEVLADQVQARKLGKRYAQLGPVVRCARDLAQAREDRDAARELASE--DRSFA 73

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E      R+           +     DS+D  +EV +G GG ES  +A  L+RMYTR+A
Sbjct: 74  AEADALDVRVVELETELAELLVPRDPHDSDDVLMEVKSGEGGEESALFAGDLVRMYTRYA 133

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYGW--LKGEQGVHRLVRISPYDSNSR 201
           E R +K E L     +  G K  TL +  K P    W  LK E GVHR+ R+   +S  R
Sbjct: 134 ESRGWKVELLGSTPSDLGGFKDVTLSVRSKDPAQGAWAALKFEGGVHRVQRVPVTESQGR 193

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS + + V+P  D++ ++EI E D R+D +RASG GGQ VNTTDSAVRITH+P+G+VV
Sbjct: 194 IHTSAAGVLVFPDADETPDVEIDEKDIRVDVFRASGHGGQSVNTTDSAVRITHLPSGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKTEIGWGRQI 312
            CQ ERSQ +NKA+A ++LRA+L              Q+R ++  +  S +        I
Sbjct: 254 SCQNERSQLQNKARAMDVLRARLQAKAEAEAAEAASEQRRSQVRTVDRSER--------I 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   + D R   +  + S VLDG+L D   A  A  +
Sbjct: 306 RTYNF-PENRISDHRVGFKAHNLSSVLDGNLTDVFAALTAADR 347


>gi|85059854|ref|YP_455556.1| peptide chain release factor 1 [Sodalis glossinidius str.
           'morsitans']
 gi|119361611|sp|Q2NRS4|RF1_SODGM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84780374|dbj|BAE75151.1| peptide chain release factor RF-1 [Sodalis glossinidius str.
           'morsitans']
          Length = 360

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 106/245 (43%), Positives = 147/245 (60%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LEV AG GG E+  +A  L RMY+R+AE R++K E +    GE  G K     +
Sbjct: 107 DERGCFLEVRAGTGGDEAALFAGDLFRMYSRYAETRRWKVEIVSASYGEHGGFKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
               AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT
Sbjct: 167 SHEGAYGLLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L A+L   E+Q+R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGLVVECQDERSQHKNKAKALAVLGARLRAAEVQRR 286

Query: 293 EEIANIGESSKTE---IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++     E S T    +G G    +IR+Y   P   V D R  +      +V++G LD  
Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRIGLTLYRLDEVIEGKLDML 340

Query: 347 MKATL 351
           ++  +
Sbjct: 341 IQPIM 345


>gi|114319440|ref|YP_741123.1| peptide chain release factor 1 [Alkalilimnicola ehrlichii MLHE-1]
 gi|119361505|sp|Q0AC04|RF1_ALHEH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114225834|gb|ABI55633.1| bacterial peptide chain release factor 1 (bRF-1) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 361

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 109/282 (38%), Positives = 162/282 (57%), Gaps = 20/282 (7%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWA 134
           +DD  I +   + + + +  +E  + E  +L    D ND    YLE+ AG GG E+  +A
Sbjct: 71  DDDLEIREMAEEEISQAQARLEALEAELQVLLLPPDPNDGRNLYLEIRAGTGGDEAALFA 130

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+  ++ E +   +GE+ G K     I G  A+  LK E G HR+ R+ 
Sbjct: 131 GDLLRMYARYAERHGWRLEEISASEGEQGGYKEVITRISGEGAWSRLKFESGAHRVQRVP 190

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D   +I I+ ++ R+DT+RASGAGGQHVN TDSA+RITH
Sbjct: 191 ETESQGRIHTSACTVAVLPEPDAVEDITINPAELRVDTFRASGAGGQHVNKTDSAIRITH 250

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKL--------YELELQKREEIANIGESSKTEI 306
           +PTGVVV+CQ ERSQHKN+AQA  +L+A+L           + ++R ++   G+ S+   
Sbjct: 251 LPTGVVVECQSERSQHKNRAQALALLQARLKNAQQAEQSAQQTEQRRQLVGSGDRSE--- 307

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
               +IR+Y   P   + D R N+      ++L GDLD  ++
Sbjct: 308 ----RIRTYNF-PQGRITDHRINLTLYRLEEILQGDLDQLVE 344


>gi|163793919|ref|ZP_02187893.1| Protein chain release factor A [alpha proteobacterium BAL199]
 gi|159181030|gb|EDP65547.1| Protein chain release factor A [alpha proteobacterium BAL199]
          Length = 356

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 107/246 (43%), Positives = 154/246 (62%), Gaps = 8/246 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD+ +A LEV AG GG E+  +A  L  MY R+A+ R ++ E +E+ + E  G K A  
Sbjct: 104 EADARNAILEVRAGTGGDEAALFAADLFAMYQRYAQGRGWRFEVMEVSENEIGGYKEAIA 163

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G + +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++ I + D RI
Sbjct: 164 TISGQSVFAHLKFESGVHRVQRVPATESQGRIHTSAATVAVLPEAEE-VDVAIDDKDLRI 222

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D YR+SGAGGQHVNTTDSAVRITH+PTGVVV  Q E+SQHKN+A+A  +LRA+L++ E  
Sbjct: 223 DVYRSSGAGGQHVNTTDSAVRITHLPTGVVVTQQDEKSQHKNRAKAMKILRARLFDQERT 282

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346
           +R+  +      K++IG G    +IR+Y   P   V D R N+       V+ G+ LD+ 
Sbjct: 283 RRD--SERAADRKSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDKVMSGEALDEI 339

Query: 347 MKATLA 352
           + A +A
Sbjct: 340 VDALIA 345


>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 356

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  L RMY+R+AE++++K E +   + E  G K     I
Sbjct: 103 DERNIFLEIRAGTGGDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E G HR+ R+   ++  R HTS  ++ V P VD+  ++ I+ +D RIDT
Sbjct: 163 EGFGAYSKLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH PTG+VV+CQ  RSQH NKAQA  +L A++   ++   
Sbjct: 223 FRASGAGGQHINKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVN-- 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ + I    ++ IG G    +IR+Y   P   + D R N+       + +GD+D+ + A
Sbjct: 281 EQQSKIASERRSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINA 339


>gi|312795903|ref|YP_004028825.1| peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI
           454]
 gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia
           rhizoxinica HKI 454]
          Length = 365

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG ES  +A  LLRMY R+AE+ +++ E +     +  G K   + I
Sbjct: 112 DERNIFVEIRAGTGGDESALFAGDLLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  EIE++ +D RIDT
Sbjct: 172 IGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDT 231

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNK +A  +L A++ + + Q  
Sbjct: 232 FRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKDRAMKVLAARIKDKQYQ-- 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A    + K+ +G G    +IR+Y   P   + D R N+       ++DGDLD  + A
Sbjct: 290 EQHAKEAATRKSLVGSGDRSERIRTYNF-PQGRLTDHRINVTLYKLEQMMDGDLDALIDA 348

Query: 350 TLA 352
            ++
Sbjct: 349 LVS 351


>gi|209516553|ref|ZP_03265407.1| peptide chain release factor 1 [Burkholderia sp. H160]
 gi|209502994|gb|EEA02996.1| peptide chain release factor 1 [Burkholderia sp. H160]
          Length = 360

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G +   + I
Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGDAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQTH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+      + K  IG G    +IR+Y   P   + D R N+       ++DGDLD+ + A
Sbjct: 285 EQQTKEAATRKNLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|124515209|gb|EAY56720.1| Peptide chain release factor 1 [Leptospirillum rubarum]
          Length = 361

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/336 (35%), Positives = 184/336 (54%), Gaps = 8/336 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   ++ K  DP + +N      L R++  L   +S  +     +     L EL  + +
Sbjct: 19  ERYREISGKMADPEVSRNPAIYMKLARDQSELSAIVSLYEHYLRIIDQQKDLQELRQDPE 78

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              ++ +    L     +VE +  +S+L   E DS + +LE+ AGAGG E+  +A  L R
Sbjct: 79  FLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFARELAR 138

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E++ F+ E +E +D E  G +   + ++G  A+  LK E GVHR+ R+   ++ 
Sbjct: 139 MYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVPVTEAG 198

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P   + ++++I   D RIDT+ AS AGGQ VNTT SAVRITH+PT +
Sbjct: 199 GRIHTSTVTVAMIPEASE-VDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITHLPTNI 257

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV CQ ERSQ KNKA+A  +LRA+L E E  ++ E   I    K+++G G    +IR+Y 
Sbjct: 258 VVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSERIRTYN 315

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             P   V D R  +       V++G++D F+ A  A
Sbjct: 316 F-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRA 350


>gi|260467160|ref|ZP_05813338.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
 gi|259029084|gb|EEW30382.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
          Length = 359

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/281 (40%), Positives = 168/281 (59%), Gaps = 16/281 (5%)

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           AL E D   ++E  + LQ+ I+L +       L    AD  +A LE+ AG GG E+  +A
Sbjct: 77  ALAEADLPGVEERIEALQKDIQLLL-------LPRDAADDKNAILEIRAGTGGDEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A +  ++ E +   DG+  G K     I G   +  LK E GVHR+ R+ 
Sbjct: 130 GDLFRMYERYAAEHGWRFETVSASDGDAGGFKEIIATISGRGVFAHLKFESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +++ R HTS +++ V P  ++ ++I+I   D RIDT RASG+GGQHVNTTDSAVRITH
Sbjct: 190 ATEASGRIHTSAATVAVLPEAEE-VDIDIRAEDIRIDTMRASGSGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG++V  Q E+SQH+N+A+A  +LRA+LY++E  K +E     E+ K+++G G    +
Sbjct: 249 LPTGIMV-VQAEKSQHQNRAKAMQILRARLYDMERSKADE--ERSEARKSQVGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+ G+LD+ + A +A
Sbjct: 306 IRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEVIDALIA 345


>gi|241664381|ref|YP_002982741.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
 gi|240866408|gb|ACS64069.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
          Length = 360

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 107 DHRNIFVEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ + P  D   +I+I+ +D RIDT
Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   V D R N+       ++DGDLD+ + A
Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELVGA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614]
 gi|166223579|sp|A1SHH9|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp.
           JS614]
          Length = 357

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 187/337 (55%), Gaps = 22/337 (6%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P    +   AK L +    L + I   +E+Q    D+ I     L ++D +  +E +   
Sbjct: 22  PETHADARLAKQLNQRYAALSSIIGAYRELQQ--LDDDIEAARELAQEDPAFAEEAAALT 79

Query: 93  QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            R + EVE +    L+  +A D  DA LEV +G GG ES  +A  LLRMYTR+AE R +K
Sbjct: 80  GR-RQEVEERLRRLLVPRDAADDKDAILEVKSGEGGEESALFAGDLLRMYTRYAEARGWK 138

Query: 152 TEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            E L+  + +  G KS T+ +K       G   Y  LK E GVHR+ R+   +S  R HT
Sbjct: 139 VEVLDAAESDLGGYKSVTVAVKAKGTPEPGEAPYALLKFEGGVHRVQRVPVTESQGRVHT 198

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S + + V P  +  ++++I E+D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ
Sbjct: 199 SAAGVLVLPEAE-QVDVQIDENDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQ 257

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE---IGWGRQIRSYVLQPYQ 321
            E+SQ +N+ QA  +LR++L     +K +  A  GE+ +++   +    +IR+Y   P  
Sbjct: 258 NEKSQLQNREQAMRILRSRLLAAAQEKAD--AEAGEARRSQVRTVDRSERIRTYNF-PEN 314

Query: 322 MVKDLRTNIEKTSPSDVLDGD----LDDFMKATLAIK 354
            + D RT  +  +   VLDGD    LD  ++A LA +
Sbjct: 315 RISDHRTGYKAYNLDQVLDGDLQPVLDSCVEADLAAR 351


>gi|226315063|ref|YP_002774959.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
 gi|254790866|sp|C0Z828|RF1_BREBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226098013|dbj|BAH46455.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
          Length = 358

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 182/323 (56%), Gaps = 11/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQET 88
           DP +  +    + L +E+  L+  ++  +E   +  ++ D   +LE  L+++   +++  
Sbjct: 21  DPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDDAKAMLEEKLDDEMREMVKLE 80

Query: 89  SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            + L   K ++E +    LL  +  D  +  +E+   AGG E+  +A +L RMYTR+AE+
Sbjct: 81  LNELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAGGDEAALFAAVLFRMYTRFAER 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             FK E LE    +  G K     + G  AY  +K E G HR+ RI   +S  R HTS +
Sbjct: 141 NAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESGAHRVQRIPATESGGRIHTSTA 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P  +D +E+E+ E D RIDT+ +SGAGGQ VNTT SAVR+THIPTG++V CQ E+
Sbjct: 201 TVLVLPEAED-VEVEVHEKDIRIDTFCSSGAGGQSVNTTKSAVRVTHIPTGIMVSCQDEK 259

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQH NK +A  +LRA+LY+  +Q++   A    + K+ +G G    +IR+Y   P   V 
Sbjct: 260 SQHSNKDKALRVLRARLYDFYMQQQN--AEADATRKSLVGTGDRSERIRTYNY-PQSRVT 316

Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347
           D R  +       VL+G++D+ +
Sbjct: 317 DHRIGLTLHRLESVLEGEMDEVI 339


>gi|149925825|ref|ZP_01914089.1| peptide chain release factor 1 [Limnobacter sp. MED105]
 gi|149825942|gb|EDM85150.1| peptide chain release factor 1 [Limnobacter sp. MED105]
          Length = 360

 Score =  188 bits (478), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 147/244 (60%), Gaps = 6/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+ AG GG ES  +A  L RMYTR+AE++ ++ E +   + E  G K   + +
Sbjct: 107 DHRNAMLEIRAGTGGDESALFAGDLFRMYTRYAERQGWQIEVMSASESELGGYKEVIIRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS  ++ V    D++  IEI+ +D RIDT
Sbjct: 167 AGDHVYKHLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEPDEAEVIEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH+PTG+VV+CQ ERSQHKNKA+A  +L  +L + ++ + 
Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGLVVECQDERSQHKNKAKAMKVLNVRLQD-KIDRE 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            + A   E  ++ +G G    +IR+Y   P   + D R N+       ++DGDL D M  
Sbjct: 286 RQAAEASE-RRSLVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDYIMDGDLTDLMNG 343

Query: 350 TLAI 353
             A 
Sbjct: 344 LTAF 347


>gi|187930213|ref|YP_001900700.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
 gi|238691828|sp|B2UDM7|RF1_RALPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187727103|gb|ACD28268.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
          Length = 360

 Score =  188 bits (478), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 107 DHRNIFVEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   V D R N+       ++DGD+D+ + A
Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|304397559|ref|ZP_07379436.1| peptide chain release factor 1 [Pantoea sp. aB]
 gi|304354731|gb|EFM19101.1| peptide chain release factor 1 [Pantoea sp. aB]
          Length = 360

 Score =  188 bits (478), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    ++EV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERACFIEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D +IDT
Sbjct: 167 TGDGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L ++++  E+ +R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A    + +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 H--AAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|311279353|ref|YP_003941584.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
 gi|308748548|gb|ADO48300.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
          Length = 360

 Score =  188 bits (478), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 99/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++EV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     +
Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   EI+ ++ RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPEINPTELRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|319945454|ref|ZP_08019714.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
 gi|319741240|gb|EFV93667.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  188 bits (478), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/274 (39%), Positives = 158/274 (57%), Gaps = 10/274 (3%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E +D   R++   E  ++  L     D+ +A LE+ AG GG ES  +A  LLRMY R+A
Sbjct: 80  EEIADAETRLQATQERIEYLLLPRDPDDARNAILEIRAGTGGDESALFAGDLLRMYLRYA 139

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R ++TE L   + E  G +   + + G   YG L+ E G HR+ R+   +S  R HTS
Sbjct: 140 EHRGWQTEILSASESELGGYREVIVQVSGQQVYGRLRYESGAHRVQRVPVTESQGRIHTS 199

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V    + + +IEIS  D RID +RASGAGGQHVN T+SAVRITH+PTG+V +CQ 
Sbjct: 200 ACTVAVMAEAEPTGDIEISPDDLRIDVFRASGAGGQHVNKTESAVRITHLPTGIVAECQD 259

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           +RSQH+N+ +A  +L  +L   + ++RE  A      K+ +G G    +IR+Y   P   
Sbjct: 260 DRSQHRNRDKAMTVLLTRLR--DARERERAAETSAHRKSLVGSGDRSERIRTYNF-PQGR 316

Query: 323 VKDLRTNIEKTSPSDVLDGDLDD----FMKATLA 352
           + D R N+       ++DGDLD+     MKA LA
Sbjct: 317 LTDHRINLTLYKLQTIIDGDLDELTDALMKARLA 350


>gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
          Length = 357

 Score =  188 bits (478), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/245 (44%), Positives = 151/245 (61%), Gaps = 9/245 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E DS +  LE+ AG GG E+  +   LL MY ++AE+R +K   L  +     G K    
Sbjct: 106 ERDSRNVILEIRAGVGGEEAALFVADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIA 165

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           LI+G  AY  LK E GVHR+ RI   +S  R HTS +++ V P VD++ E+EI+  D +I
Sbjct: 166 LIEGVGAYSRLKYESGVHRVQRIPRTESGGRIHTSTATVAVLPEVDET-ELEINPQDLKI 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-EL 289
           +T+RASGAGGQ+VNTT++AVR+THIPTG+ V CQ ERSQ +NK +A  +L A+L +  E 
Sbjct: 225 ETFRASGAGGQYVNTTETAVRVTHIPTGISVACQDERSQFQNKQKALKILYARLKDFYER 284

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           QK EEIA      K ++G G    +IR+Y   P   V D R N+      DVL+G LD+ 
Sbjct: 285 QKEEEIAK---ERKMQVGTGERSEKIRTYNF-PQGRVTDHRINLTLYKLHDVLEGKLDEI 340

Query: 347 MKATL 351
           ++A +
Sbjct: 341 IEALI 345


>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
 gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
          Length = 361

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 148/238 (62%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ + +LE+ AG GG E+  +A  LLRMYTR+AE++ +K E L   +GE  G +     +
Sbjct: 109 DNANVFLEIRAGTGGDEAAIFAGDLLRMYTRYAEQQNWKLEILSASEGEHGGYREVIARL 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P +D+    +I+ +D R+DT
Sbjct: 169 AGQGAYSRLKFESGAHRVQRVPETESQGRIHTSAATVAILPELDEVEMPDINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSAVR+TH+PTG+VV+CQ+ERSQHKN+A+A   L A+L+E E + +
Sbjct: 229 FRASGAGGQHVNKTDSAVRLTHLPTGIVVECQEERSQHKNRAKAMTYLAARLFEAEREAQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               +     K+ +G G    +IR+Y   P   V D R N+       V+ GDLD  +
Sbjct: 289 AAAQS--AERKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEQVMAGDLDPVI 343


>gi|119945323|ref|YP_943003.1| peptide chain release factor 1 [Psychromonas ingrahamii 37]
 gi|166223592|sp|A1SV89|RF1_PSYIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119863927|gb|ABM03404.1| bacterial peptide chain release factor 1 (bRF-1) [Psychromonas
           ingrahamii 37]
          Length = 363

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 2/240 (0%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AGAGG E+  +A  L RMY+++AE + ++ E +  +  E+ G K     I
Sbjct: 109 DDRNCYLEIRAGAGGDEAAIFAGNLFRMYSKYAESKGWRVEVMNSNASEQGGYKELIAKI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG +K E G HR+ R+   +S  R HTS  ++ V P V ++  I I+ +D ++DT
Sbjct: 169 DGEGAYGIMKFESGGHRVQRVPETESQGRIHTSACTVVVMPEVPEAEAISINPADLKVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291
           +RASGAGGQHVN TDSAVR+TH+PTG VV+CQ +RSQHKN+AQA ++L+++L + E +K 
Sbjct: 229 FRASGAGGQHVNKTDSAVRLTHLPTGTVVECQDQRSQHKNRAQAMSVLQSRLQQAEDEKS 288

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             E   I  S         +IR+Y   P   V D R N+     ++VL+GDL+   +  L
Sbjct: 289 HAEEQTIRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTVYRLNEVLEGDLNALHEPIL 347


>gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
 gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
          Length = 361

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 180/320 (56%), Gaps = 11/320 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----E 87
           DP +  +  + + L RE   L+  +    E Q+ L  +L   E  L +DD  + +    E
Sbjct: 25  DPGVISDQDQFRRLSREFSELETVVKCFGEYQE-LQGDLEAAESMLADDDADMREMAKTE 83

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            S+   R +      Q   L     DS++ +LE+ AG GG E+  ++  L RMY+R+AE+
Sbjct: 84  ISEGEARREALEAELQLLLLPRDPKDSHNVFLEIRAGTGGDEAAIFSGDLQRMYSRFAER 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E L    GE  G K     I+G + Y +LK E G HR+ R+   +S  R HTS  
Sbjct: 144 QGWRIEVLSERPGEHGGYKEIISRIEGSDVYAYLKFESGAHRVQRVPETESQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ +    ++   +EI+++D R+DTYRASGAGGQHVN TDSAVR+TH+PTG+VV+CQ ER
Sbjct: 204 TVAILAEPEELEAVEINKADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKN+A+A ++L+AKL    + +  + +   E  +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNRARAMSLLQAKLD--SVAEESQASEQAEQRRNLVGTGDRSDRIRTYNF-PQGRVT 320

Query: 325 DLRTNIEKTSPSDVLDGDLD 344
           D R N+      +V+ GD++
Sbjct: 321 DHRINLTLYKLDEVMAGDME 340


>gi|283953774|ref|ZP_06371305.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283794815|gb|EFC33553.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 355

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DEKNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSMGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
 gi|229576658|sp|B4U955|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
          Length = 356

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/244 (44%), Positives = 150/244 (61%), Gaps = 9/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  LE+ AGAGG E+  +A  LLRMY R+AE++ +K   LE +     G K   + I
Sbjct: 108 DSKNVILEIRAGAGGEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E GVHR+ R+   +S  R HTS  ++ V P  D++ ++ I+  D RI+T
Sbjct: 168 EGKNVYSHLKYESGVHRVQRVPITESGGRIHTSTITVAVLPEADET-DVVINPQDLRIET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291
           +RASGAGGQ+VNTT+SAVRITHIPTG+ + CQ ERSQ +NK +A  +L A+L +  E QK
Sbjct: 227 FRASGAGGQYVNTTESAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQK 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +EE     +  K ++G G    +IR+Y       V D R N+      DVLDGDLDD + 
Sbjct: 287 KEE---TDKERKEQVGTGERSEKIRTYNFSQ-NRVTDHRINLTLHKLQDVLDGDLDDIIS 342

Query: 349 ATLA 352
           +  A
Sbjct: 343 SLQA 346


>gi|266621433|ref|ZP_06114368.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
 gi|288866872|gb|EFC99170.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
          Length = 358

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/290 (38%), Positives = 169/290 (58%), Gaps = 20/290 (6%)

Query: 79  EDDCSILQETSDN----LQRIKLEVEYKQFESL------LSGEADSND---AYLEVHAGA 125
           ED  +IL E +D     L + +L    KQ E+L      L    D ND     LE+ AGA
Sbjct: 59  EDSLAILDEENDEEMRELAKEELSDAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY  ++E + +K E + +++    G K    ++ G  AY  LK E 
Sbjct: 119 GGDEAALFAAELYRMYVNYSESQHWKVELISVNENGIGGFKEVVAMVTGKGAYSKLKYES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS +++ V P  +D +++ I + DCRID  RASG GGQ VNT
Sbjct: 179 GVHRVQRVPETESGGRIHTSTATVAVMPEAED-VDVVIEDKDCRIDVMRASGNGGQCVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+   +  E  +++
Sbjct: 238 TDSAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQN--SEAEERRSQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IG G    +IR+Y   P   V D R  +       +++GD+ + + + +A
Sbjct: 296 IGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDITELLDSLIA 344


>gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 355

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 154/242 (63%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L RMY+R+AEK+ +K + ++    +  G K    ++
Sbjct: 106 DEKNVIMEIRAGTGGEEAALFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ RI   +S  R HTS +++ V P  ++ +E++I+ +D RID 
Sbjct: 166 EGRGAYSKLKFESGVHRVQRIPVTESGGRIHTSAATVAVLPEAEE-VEVDINPNDLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PTG+VV CQ E+SQHKNK +A  +LR++L  LEL++ 
Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRL--LELKRA 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A I ++ ++++G G    +IR+Y   P   V D R N+       VL+G+LD+ ++A
Sbjct: 283 EHEAEIADARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLDVVLEGELDEIIEA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
 gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
          Length = 360

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/264 (39%), Positives = 157/264 (59%), Gaps = 8/264 (3%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           + KLE      ++LL      D  + +LE+ AG GG ES  +A  L RMY+R+AE++ +K
Sbjct: 86  KAKLEAIEAALQTLLLPKDPNDDKNIFLEIRAGTGGDESGLFAGDLYRMYSRYAERQGWK 145

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E +  ++GE  G K     I+G  AY  LK E G HR+ R+   ++  R HTS  ++ +
Sbjct: 146 VEVMSANEGEMGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAI 205

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  ++ I+ +D RIDT+RASGAGGQH+N TDSAVR+TH PTG+VV+CQ+ RSQH 
Sbjct: 206 LPEADEVSDVVINPADVRIDTFRASGAGGQHINKTDSAVRLTHAPTGIVVECQEGRSQHA 265

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328
           NKAQA+ +L A++   ++   E+ + I    K+ IG G    +IR+Y   P   + D R 
Sbjct: 266 NKAQAFAVLAARIKAKQVD--EQQSKIASERKSLIGSGDRSERIRTYNY-PQGRITDHRI 322

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N+       + +GD+D+ + A  A
Sbjct: 323 NLTLYKIDAITEGDMDELIGALAA 346


>gi|300871300|ref|YP_003786173.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
 gi|300689001|gb|ADK31672.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
          Length = 358

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG ES  +   L RMY+R+ E+  FK E ++I   E  G K     +
Sbjct: 108 DGKNIIVEIRVGTGGDESALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NAY  LK E G HR+ RI   +S  R HTS S++ + P  ++S ++ I + D R+D 
Sbjct: 168 SGKNAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAIMPEAEES-DVIIKDEDIRVDI 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVRITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  +R
Sbjct: 227 FRSSGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A   +  + +IG G    +IR+Y   P   V D R N+        +DG++ +   A
Sbjct: 287 K--AKEDKERRDKIGSGDRSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDA 343


>gi|312194810|ref|YP_004014871.1| peptide chain release factor 1 [Frankia sp. EuI1c]
 gi|311226146|gb|ADP79001.1| peptide chain release factor 1 [Frankia sp. EuI1c]
          Length = 360

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/317 (37%), Positives = 175/317 (55%), Gaps = 17/317 (5%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
           + +  +  DP +  +V EA+ L R    L   +   +EI+    D     ELA+E  D S
Sbjct: 13  AVIEKRLADPAVHNDVGEARALGRRYAELAPIVELAREIEQANGDLETARELAVE--DPS 70

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSG--EADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              E +D      ++   ++  +LL+     D  DA LEV AGAGG ES  +A  LLRMY
Sbjct: 71  FRAEVTD--LETAIQDRRQRLRTLLAPTDPDDGRDAILEVKAGAGGEESALFAGDLLRMY 128

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--------GPNAYGWLKGEQGVHRLVRI 193
            R+AE+R +KTE LE +  +  G +  ++ +K         P  YG L+ E GVHR+ R+
Sbjct: 129 LRYAERRGWKTEILEANPSDLGGYRDVSVAVKYRGQVPPGQPGVYGRLRFEGGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS + + V P  ++ ++++I  +D RID +R+SG GGQ VNTTDSAVRIT
Sbjct: 189 PVTESAGRIHTSAAGVLVMPEAEE-VDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQI 312
           H+PTGVVV CQ E+SQ +NK  A  +LRA+L  +  +K E   +   +S+   +    ++
Sbjct: 248 HVPTGVVVSCQNEKSQLQNKESALRILRARLLTVAREKAESEKSAARASQVRTMDRSDKV 307

Query: 313 RSYVLQPYQMVKDLRTN 329
           R+Y   P   + D R N
Sbjct: 308 RTYNF-PENRIADHRVN 323


>gi|332188246|ref|ZP_08389974.1| peptide chain release factor 1 [Sphingomonas sp. S17]
 gi|332011745|gb|EGI53822.1| peptide chain release factor 1 [Sphingomonas sp. S17]
          Length = 357

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 150/245 (61%), Gaps = 9/245 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +A  L RMY R+AE++ ++ E +     +  G K     
Sbjct: 106 ADERAAMLEIRAGTGGDEAALFAGDLFRMYQRYAERQGWRVEVISASIPDTGGYKEVVAS 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I + D RID
Sbjct: 166 VAGAGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDLQIDDKDLRID 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SGAGGQHVNTTDSA+RITHIPTG+VV  Q ERSQHKN+A+A  +LR +LYE E   
Sbjct: 225 IYRSSGAGGQHVNTTDSAIRITHIPTGLVVIQQDERSQHKNRAKAMKVLRTRLYEAE--- 281

Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RE + A    + ++ +G G    +IR+Y   P   V D R N+      ++L+G+LD+ +
Sbjct: 282 RERLAAERAGTRRSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGELDELI 340

Query: 348 KATLA 352
            A LA
Sbjct: 341 GALLA 345


>gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13]
 gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13]
          Length = 358

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  L RMYTR+AE+  +  E +  ++    G K     I
Sbjct: 107 DDKNIFLEIRAGTGGDESALFAADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  +++I+ +D RIDT
Sbjct: 167 NGDGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH PTG+VV+CQ +RSQH+NKAQA ++L AK+ + ++Q +
Sbjct: 227 YRASGAGGQHINKTDSAVRITHEPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQAQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  +      K+ IG G    +IR+Y   P   + D R N+       ++DGDL++ + A
Sbjct: 287 Q--SQRASERKSLIGSGDRSERIRTYNF-PQGRITDHRINLTLYKIDFIMDGDLEEMINA 343


>gi|152986475|ref|YP_001350646.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
 gi|166223587|sp|A6VC61|RF1_PSEA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150961633|gb|ABR83658.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
          Length = 360

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  ++  L RMY+R+AE++ ++ E L  ++GE  G K     +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGENVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSAVRITH+P+G+VV+CQ+ERSQHKN+A+A   L AKL + +    
Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHLPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + K  +G G    +IR+Y   P   V D R N+   S  +V++G ++  ++ 
Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|88596258|ref|ZP_01099495.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88191099|gb|EAQ95071.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 355

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLIKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|153952433|ref|YP_001398893.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223543|sp|A7H5W3|RF1_CAMJD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152939879|gb|ABS44620.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 355

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQEN 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
 gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
          Length = 355

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/271 (40%), Positives = 166/271 (61%), Gaps = 16/271 (5%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           L+E  D+L++ +     K+ ++LL  +   D  +  +E+ AG GG E+  +A  L RMY+
Sbjct: 81  LEELKDHLEKSE-----KRLKTLLVPKDPLDGKNTIIEIRAGTGGDEASLFAADLYRMYS 135

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R++E++ +K E +E  D E  G K     I G   YG L+ E GVHR+ R+   +S  R 
Sbjct: 136 RFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESGVHRVQRVPSTESQGRI 195

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  ++ V P  + + +I+IS  D +ID +R+SG GGQ VNTTDSAVR+THIPTGVVV 
Sbjct: 196 HTSAVTVAVLPEAEKT-DIDISPEDLKIDVFRSSGPGGQSVNTTDSAVRVTHIPTGVVVT 254

Query: 263 CQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
           CQ E+SQ KNKA+A  +LRA+LYE  E+++R+E     ++ K++IG G    +IR+Y   
Sbjct: 255 CQDEKSQLKNKAKALRVLRARLYEAEEMKQRKE---RDQARKSQIGSGDRSERIRTYNF- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           P   V D R N+       V++G L++ + A
Sbjct: 311 PQNRVTDHRINLTLYKLDQVMEGALNELIDA 341


>gi|300176358|emb|CBK23669.2| unnamed protein product [Blastocystis hominis]
          Length = 244

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/214 (44%), Positives = 139/214 (64%), Gaps = 3/214 (1%)

Query: 136 MLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           MLL MYT +A+K  +K + + ++ DG+     S+ L ++G +   +L  E GVHRLVRIS
Sbjct: 1   MLLAMYTSFAQKMNWKCKLISKLDDGDSC--HSSILKLEGDDLASYLSLESGVHRLVRIS 58

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D N RRHTSF+S+ V PV + +  + I  ++ +ID +R+SG GGQHVN T+SAVR+TH
Sbjct: 59  PFDKNQRRHTSFASVSVSPVPEAASSLRILPTELQIDRFRSSGPGGQHVNKTESAVRVTH 118

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +P+G+V +CQ ER+QH+N   A  M+++KL   E +K  E      + K    W  QIRS
Sbjct: 119 LPSGIVAECQAERNQHQNLEIAMEMVKSKLLLREAEKEAEKKQEDHARKDVNAWSSQIRS 178

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           YVL PY+MVKD R  +E+     +L GDL  F++
Sbjct: 179 YVLHPYKMVKDHRFGVEEGDVEKILGGDLKGFVE 212


>gi|86152274|ref|ZP_01070485.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|121613478|ref|YP_001001255.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148925756|ref|ZP_01809444.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157415831|ref|YP_001483087.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|166223544|sp|A1W1L4|RF1_CAMJJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047202|sp|A8FNS3|RF1_CAMJ8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840763|gb|EAQ58014.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|87249710|gb|EAQ72669.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|145845766|gb|EDK22857.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157386795|gb|ABV53110.1| peptide chain release factor RF-1 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748468|gb|ADN91738.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315931656|gb|EFV10617.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 355

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
 gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
          Length = 357

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/255 (41%), Positives = 158/255 (61%), Gaps = 9/255 (3%)

Query: 98  EVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           EV  K+ ++LL      D  +  +E+ AG GG E+  +A  L RMY+R+AEKR +  E +
Sbjct: 86  EVLEKELKTLLIPKDPRDERNVIVEIRAGTGGEEAALFAGDLFRMYSRYAEKRGWSVEII 145

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
             ++    G K    ++KG  AY  LK E GVHR+ RI   +S+ R HTS +++ V   V
Sbjct: 146 SQNETGIGGYKEIIFMVKGKGAYSRLKYESGVHRVQRIPVTESSGRIHTSTATVAVLAEV 205

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D+ ++I I +SD  I+ YR++GAGGQ+V    +AVRITH+PTG+VV CQ ERSQ +NK +
Sbjct: 206 DE-VDINIPDSDLEIEVYRSAGAGGQNVQKNSTAVRITHLPTGIVVACQDERSQLQNKLR 264

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A ++LRAKLYE+E QKR++   +  + ++++G G    +IR+Y   P   V D R  I  
Sbjct: 265 AMSILRAKLYEIEEQKRQQ--ELDATRRSQVGTGERAEKIRTYNF-PQSRVTDHRIGISS 321

Query: 333 TSPSDVLDGDLDDFM 347
            +   VLDG++D F+
Sbjct: 322 YNLPAVLDGEIDLFI 336


>gi|315125019|ref|YP_004067023.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018741|gb|ADT66834.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 355

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
 gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
          Length = 354

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 181/336 (53%), Gaps = 9/336 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L TK  DP +  +   A+ L +    L   +   +E++    D     ELA E  D +  
Sbjct: 15  LETKLADPSVHADQAGARKLGKRYAELTPIVRAARELEQTRNDLGAARELAGE--DPAFA 72

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  +   RI    E      L     DS+D  +E+ +G GG ES  +A  LLRMY R+A
Sbjct: 73  EEADELSARIPQLEERLTELLLPRDPHDSSDVVMEIKSGEGGEESALFAGDLLRMYLRYA 132

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIK----GPNA-YGWLKGEQGVHRLVRISPYDSNS 200
           E++ +K E L+  D +  G K  T+ IK    GP+  +  LK E GVHR+ R+   +S  
Sbjct: 133 ERQGWKAEVLDGTDSDLGGFKDVTVAIKSRGDGPDGVWSRLKYEGGVHRVQRVPVTESQG 192

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS + + V P  +D   IEI + D R+D +R+SG GGQ VNTTDSAVRITH+PTG+V
Sbjct: 193 RIHTSAAGVLVIPETEDVASIEIDDKDLRVDVFRSSGKGGQSVNTTDSAVRITHLPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQP 319
           V CQ ERSQ +NKA+A  +L+A+L  L  +K ++ A+    ++   +    ++R+Y   P
Sbjct: 253 VSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVRTVDRSERVRTYNF-P 311

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              + D R   +  +   VLDG+LD  + A  A  +
Sbjct: 312 ESRISDHRVGYKAHNLDAVLDGELDAVLDALSAADR 347


>gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
 gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
          Length = 358

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  LLRMYTR+AE+ +++ E +   + +  G K   + +
Sbjct: 107 DEKNIFLEIRAGTGGDEAALFAGDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+  LK E G HR+ R+   ++  R HTS  ++ V P  ++  E+ ++ +D RIDT
Sbjct: 167 VGFGAFSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITH+PTG+V +CQ  RSQH NKA A  +L A++Y+++L+ +
Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLRAQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++  ++    K+ IG G    +IR+Y   P   + D R N+       V+DGDL +   A
Sbjct: 287 QQ--SVAAERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKLDQVMDGDLFELTDA 343

Query: 350 TLA 352
            +A
Sbjct: 344 LIA 346


>gi|86149291|ref|ZP_01067522.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|218563201|ref|YP_002344981.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|20139359|sp|Q9PM63|RF1_CAMJE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840073|gb|EAQ57331.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|112360908|emb|CAL35709.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|284926807|gb|ADC29159.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927641|gb|EFV06972.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929077|gb|EFV08310.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 355

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|295688344|ref|YP_003592037.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
 gi|295430247|gb|ADG09419.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
          Length = 356

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/241 (44%), Positives = 152/241 (63%), Gaps = 11/241 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A LEV AG GG E+  +A  L RMY R+A+   ++ E   I +GE  G K     I G  
Sbjct: 107 AILEVRAGTGGDEAALFAGDLFRMYQRYAQLHGWRVEIDSISEGEMGGYKEIVASITGDG 166

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +G LK E GVHR+ R+   ++  R HTS +++ V P  +D +EI+I ESD RIDTYR+S
Sbjct: 167 VFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAED-VEIDIKESDLRIDTYRSS 225

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN TDSAVRITH+PTGVVV    E+SQH+N+A+A   L+A+LY+++   RE + 
Sbjct: 226 GAGGQHVNKTDSAVRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALD 281

Query: 297 NI-GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +   E+ K+++G G    +IR+Y   P   V D R N+   + S +++GD LDD +   +
Sbjct: 282 SARSEARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYNLSRIMEGDALDDVINPLI 340

Query: 352 A 352
           A
Sbjct: 341 A 341


>gi|218960517|ref|YP_001740292.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729174|emb|CAO80085.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 355

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 153/240 (63%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+ AG GG E+  +A  L RMY+ +AE + +K E + ++  E  G K     +
Sbjct: 108 DAKNAIVEIRAGTGGEEAALFAADLFRMYSYYAEMKGWKLEVISMNQTELGGYKEIIFQL 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y +++ E GVHR+ RI   +S+ R HTS  ++ V P  +D I+I+I ESD RID 
Sbjct: 168 SGKDVYSYMRFESGVHRVQRIPVTESSGRIHTSAVTVAVLPEAED-IDIDIQESDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNKA+A  +LR++L + E+ ++
Sbjct: 227 YRSTGHGGQSVNTTDSAVRITHLPTGIVVTCQDEKSQIKNKAKALKVLRSRLLDEEISRQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   I ++ K ++  G    +IR+Y   P   V D R N+   +    L G++++F++A
Sbjct: 287 EQ--EIAKARKAQVSTGDRSAKIRTYNF-PQSRVTDHRINLTSYNLDSFLAGNIEEFIQA 343


>gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_05I22]
          Length = 334

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/280 (38%), Positives = 164/280 (58%), Gaps = 9/280 (3%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEAD 113
           I  ++ ++  L D + ++  A  +D+   + E    L  +RI +E E  Q   L   + D
Sbjct: 49  IELVRALESELKDAITMVVEAAGDDEMQAMAEAEVTLLKERIPIEKERLQLLLLPKDKDD 108

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           S +A LEV AG GG E+  +   L  MY R+A K  ++ E +E+ +    G K AT  I 
Sbjct: 109 SRNAILEVRAGTGGDEAALFGANLFSMYQRFAAKNGWRFEVMEVSETGIGGYKEATATIS 168

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G + +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++I+I E+D RID +
Sbjct: 169 GIDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-VDIDIDENDLRIDVF 227

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + E
Sbjct: 228 RSSGPGGQSVNTTDSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVE 287

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
             +    + K ++G G    +IR+Y   P   V D R N+
Sbjct: 288 --SERAAARKGQVGSGDRSERIRTYNF-PQGRVTDHRINL 324


>gi|283956995|ref|ZP_06374467.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791496|gb|EFC30293.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 355

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|114567903|ref|YP_755057.1| peptide chain release factor 1 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|119361631|sp|Q0AUB8|RF1_SYNWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114338838|gb|ABI69686.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 355

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 149/244 (61%), Gaps = 9/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     +E+ AG GG E+  +A  L RMY+R+AE++ +K E ++ H  +  GIK    ++
Sbjct: 106 DEKSVIMEIRAGTGGEEAALFAGDLFRMYSRYAEEQGWKIEIMDTHYTDIGGIKEIVFVV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   +S  R HTS +++ V P  ++ +E+ I  +D RID 
Sbjct: 166 DGRGAYSKLKFESGVHRVQRIPVTESGGRIHTSAATVAVLPEAEE-VEVAIDPNDLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           Y +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQHKNKA+A  +LRA+L E LE +K
Sbjct: 225 YCSSGPGGQSVNTTQSAVRITHVPTGEVVTCQDEKSQHKNKAKALRVLRARLKELLEEEK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             E+A    + K ++G G    +IR+Y   P   V D R N+       VL+G L++ + 
Sbjct: 285 NAEMAG---TRKNQVGSGDRSERIRTYNF-PQGRVSDHRINLTLHRLESVLEGRLEEIIN 340

Query: 349 ATLA 352
           A +A
Sbjct: 341 ALIA 344


>gi|260755553|ref|ZP_05867901.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
 gi|260675661|gb|EEX62482.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 342

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 19/297 (6%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 53  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 169

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+
Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINL 341


>gi|86152633|ref|ZP_01070838.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843518|gb|EAQ60728.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 355

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ V P VDD IEIEI+ +D ++D 
Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E +A   E+ K+++G G    +IR+Y   P   + D R N+
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320


>gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
          Length = 360

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  K 
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKC 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338


>gi|24212814|ref|NP_710295.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45656013|ref|YP_000099.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|32171561|sp|Q8F9S6|RF1_LEPIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59798055|sp|Q72W38|RF1_LEPIC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24193465|gb|AAN47313.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45599246|gb|AAS68736.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 354

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/261 (41%), Positives = 156/261 (59%), Gaps = 11/261 (4%)

Query: 95  IKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +KLE   ++FE LL    D N      +E+ AG GG E+  +   L RMY+++A+K+K K
Sbjct: 83  LKLETLEREFEILLL-PPDPNSGKNILVEIRAGTGGEEAGLFVADLFRMYSKFADKQKIK 141

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE ++       G+K     ++   AY   K E G HR+ RI   +S  R HTS  ++ V
Sbjct: 142 TEIIDSSPTGIGGLKEIIFALEDDRAYDLFKFEGGTHRVQRIPSTESGGRIHTSAVTVAV 201

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  E++I+ESD RID YR+SGAGGQHVNTTDSAVRITHIPTGVVV CQ E+SQHK
Sbjct: 202 LPEADEE-EVQINESDLRIDVYRSSGAGGQHVNTTDSAVRITHIPTGVVVACQDEKSQHK 260

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328
           NKA+A  +L A++ E + + +++ ++     K  IG G    ++R+Y   P     D R 
Sbjct: 261 NKAKALRILSARILEKQAEDKKQASDA--IKKQMIGSGDRSERVRTYNF-PQGRCTDHRI 317

Query: 329 NIEKTSPSDVLDGDLDDFMKA 349
                + S +++GDLD+ + A
Sbjct: 318 GFTSHNLSAIMEGDLDELIGA 338


>gi|319760481|ref|YP_004124419.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039195|gb|ADV33745.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 360

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/349 (36%), Positives = 192/349 (55%), Gaps = 33/349 (9%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEI--QDRLCDNLI 71
           +R   L    E P+  QN  +   + +E  HL + +++        KEI     +  ++ 
Sbjct: 15  ERFYKLKQLIEHPNHIQNNKDFHSISKEYAHLAHIVTYFEQWLNIQKEILHTKEILTDID 74

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY---LEVHAGAGGT 128
           L +LAL  D+   L    +NL++ K+++        L    D ND Y   +E+ AG GG 
Sbjct: 75  LHDLAL--DELKKLNIIENNLEK-KIKI--------LLLPTDPNDKYGCFIELRAGTGGK 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  L RMYTR+AE +++  E +    GE  G K     I    AY  LK E G H
Sbjct: 124 EAAIFSGELFRMYTRYAETQRWNIEIIHATYGEYGGYKEIIAKISCNGAYNQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + D     I+ +D RIDT+R+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPYTESQGRIHTSTCTVAVIPKIPDIKLPNINPNDLRIDTFRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEI 306
           A+RITHIP+G+ V+CQ ERSQHKNK++A ++LR++LY + +++R+    I ES+  +  I
Sbjct: 244 AIRITHIPSGLSVECQDERSQHKNKSKALSILRSRLYAMNIKRRK----IEESNFRRNLI 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y  Q  + V D R +      SDV+DG L   +K  + 
Sbjct: 300 GSGDRSDRIRTYNFQQGR-VTDHRIDFTSYKLSDVMDGALGILIKPIIC 347


>gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|238054474|sp|B5YIQ7|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 353

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 183/328 (55%), Gaps = 12/328 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC---SILQET 88
           DP ++ N  E     RE+  L+  ++  +E + R+   +   E  ++  D     + +E 
Sbjct: 21  DPKVFSNKDEYMKYSREQAELEPIVTKFREYK-RILKQIEEAEEMIKSGDPDLKELAEEE 79

Query: 89  SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
              L++IK ++E +    LL  +  D  +  LE+ AG GG E+  +A  L RMY ++AE 
Sbjct: 80  LQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTGGEEAALFAANLFRMYAKYAES 139

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + +K E ++ H     G K     I G  A+  LK E GVHR+ RI   +++ R HTS +
Sbjct: 140 KGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESGVHRVQRIPVTEASGRIHTSTA 199

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P  ++ ++I+I E D RIDT+ +SG GGQ VNT  SAVRI HIPTG++VQCQ ER
Sbjct: 200 TVAVLPEAEE-VDIKIDEKDLRIDTFCSSGPGGQSVNTAYSAVRIVHIPTGIIVQCQDER 258

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQ KN+ +A  +LRA+L E+E QK+E  A      K ++G G    +IR+Y   P   V 
Sbjct: 259 SQIKNREKAMKVLRARLLEIERQKKE--AERAAERKGQVGTGERSERIRTYNF-PQNRVT 315

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           D R  +       VL+G++D+ + A ++
Sbjct: 316 DHRIGLTLYKLEQVLNGNIDEIIDALIS 343


>gi|154252199|ref|YP_001413023.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
 gi|171769599|sp|A7HTY3|RF1_PARL1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154156149|gb|ABS63366.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
          Length = 355

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/287 (40%), Positives = 166/287 (57%), Gaps = 20/287 (6%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + E+A EE     +   ++ L R++ EV   Q   L    AD  +  LEV AG GG E+ 
Sbjct: 69  MAEMAKEE-----IARLNEELPRLEHEV---QLMLLPKDAADDRNVILEVRAGTGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + +K E +   +GE  G K     I GP  Y  LK E GVHR+ 
Sbjct: 121 LFAGDLFRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +   R HTS +++ V P  ++ +++EI + D RID YRASGAGGQHVN T+SAVR
Sbjct: 181 RVPVTEGGGRIHTSAATVAVLPEAEE-VDVEIEDKDLRIDVYRASGAGGQHVNKTESAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK--REEIANIGESSKTEIGWG 309
           ITH+PTG+VV  Q E+SQHKNKA+A  +LRA++++ E ++  RE  A    + K ++G G
Sbjct: 240 ITHLPTGIVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSA----ARKGQVGSG 295

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
               +IR+Y   P   V D R N+       VL+G+ L + + A +A
Sbjct: 296 DRSERIRTYNF-PQSRVTDHRINLTLHKLDQVLEGEALGELIDALIA 341


>gi|84503529|ref|ZP_01001580.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
 gi|84388019|gb|EAQ01067.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
          Length = 349

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/280 (40%), Positives = 165/280 (58%), Gaps = 12/280 (4%)

Query: 80  DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  +     + +QR++ ++    +  Q   L    ADS  A +E+  G GG E+  +A 
Sbjct: 63  DDPEMRALADEEIQRLRHDLPELEQALQIALLPKDAADSRPAMIEIRPGTGGDEAALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LLRMY R++E R ++ + +E+++ E  GIK     ++G N +  LK E GVHR+ R+  
Sbjct: 123 DLLRMYQRYSEARGWRFQVVELNETELGGIKEVVANVQGENVFARLKFESGVHRVQRVPE 182

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P  +D ++I+I  S+ RIDT RASGAGGQHVNTTDSAVRITH+
Sbjct: 183 TESGGRIHTSAATVAVLPEAED-VDIQIDPSEIRIDTMRASGAGGQHVNTTDSAVRITHV 241

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV    E+SQH+N+A A  +LR +L++LE QK  +        K ++G G    +I
Sbjct: 242 PTGIVV-VSSEKSQHQNRAIAMQVLRTRLFDLERQKAADARA--ADRKAQVGTGDRSERI 298

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   V D R N+       V+ GDLD+ + A  A
Sbjct: 299 RTYNF-PQGRVTDHRINLTLYRLDQVMQGDLDEVIDALTA 337


>gi|118594305|ref|ZP_01551652.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
 gi|118440083|gb|EAV46710.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
          Length = 359

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 148/238 (62%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AGAGG ES  +A  + RMY+R+AE+ +++ E +  ++ E  G K     +
Sbjct: 107 DEKNIFLEIRAGAGGDESALFAGDIFRMYSRYAERMRWQLEVISSNESEVGGFKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V    D+  +++I+ +D RIDT
Sbjct: 167 IGQGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAVLAEADEISDVDINPADIRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH PTG+VV+CQ +RSQH+NKAQA ++L A++ + ++  +
Sbjct: 227 YRASGAGGQHINKTDSAVRITHAPTGIVVECQDDRSQHRNKAQAMSILAARIKDAQINDQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +  + I    K+ IG G    +IR+Y   P   + D R N+       V+DGDL + +
Sbjct: 287 Q--SKIATERKSLIGSGDRSERIRTYNF-PQGRITDHRINLTLYKIDFVMDGDLTELI 341


>gi|260891992|ref|YP_003238089.1| peptide chain release factor 1 [Ammonifex degensii KC4]
 gi|260864133|gb|ACX51239.1| peptide chain release factor 1 [Ammonifex degensii KC4]
          Length = 355

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/243 (43%), Positives = 153/243 (62%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  LLRMY R+AEKR +KTE L     +  G K   +LI
Sbjct: 106 DEKNVILEIRAGTGGEEAALFAADLLRMYLRYAEKRGWKTELLSASPTDLGGFKEVVVLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY +LK E GVHR+ R+   +++ R HTS +++ V P  ++ +++EI   D R+DT
Sbjct: 166 EGRGAYSFLKYESGVHRVQRVPVTEASGRIHTSAATVAVLPEAEE-VDVEIDPKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PTG+VV CQ ERSQ KN+ +A  +LRA+L  L+L++R
Sbjct: 225 FCSSGHGGQSVNTTYSAVRITHLPTGIVVTCQDERSQLKNREKAMKVLRARL--LDLKRR 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A I    + ++  G    ++R+Y   P   V D R N+      ++L+GDLD+ + A
Sbjct: 283 EQEAAIAAERRAQVKSGDRSERVRTYNF-PQNRVTDHRINLTLYRLEEILEGDLDELITA 341

Query: 350 TLA 352
             A
Sbjct: 342 LAA 344


>gi|126725348|ref|ZP_01741190.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
 gi|126704552|gb|EBA03643.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/344 (38%), Positives = 187/344 (54%), Gaps = 37/344 (10%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQD-----RLCDNLIL 72
           R  FL  K        N++E   L RE   L    D  ++F   +QD      + D+  +
Sbjct: 84  RFEFLEAKLASGE-TDNIVE---LSREYSELKPVADQIMAFQTLVQDIDAAEAMLDDPEM 139

Query: 73  LELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            ELA EE     L+E  D+L      IKL +       L    AD+  A +E+  G GG 
Sbjct: 140 RELAAEE-----LKELRDSLPDAENAIKLVL-------LPKDTADARPAIIEIRPGTGGD 187

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY R+AE   +K E +E    E  GIK     IKG N +G LK E GVH
Sbjct: 188 EAALFAGDLLRMYQRYAESNGWKFEIIEEQVSELGGIKEIIANIKGTNVFGKLKFESGVH 247

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P  ++ ++++I  SD RIDT RASGAGGQHVNTTDS
Sbjct: 248 RVQRVPTTESGGRIHTSAATVAVLPEAEE-VDLDIPASDLRIDTMRASGAGGQHVNTTDS 306

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG++V    E+SQH+N+  A  ++R++LYE+E QK  +        K+++G 
Sbjct: 307 AVRITHLPTGMIV-VSMEKSQHRNREIAMQVMRSRLYEMERQKVAD--ERAADRKSQVGS 363

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R N+       V+ G+LD+ + A
Sbjct: 364 GDRSERIRTYNF-PQGRMTDHRINLTLYKLDQVMSGELDEIIDA 406


>gi|308186585|ref|YP_003930716.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
 gi|308057095|gb|ADO09267.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
          Length = 360

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    ++EV AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DERACFIEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIVSANEGEHGGYKEVIARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG +K E G HR+ R+   +S  R HTS  ++ V P + ++   EI+  D +IDT
Sbjct: 167 TGDGAYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L ++++  E+ +R
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR 286

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A    + +  +G G +    R+Y   P   V D R N+      +V++G LD  ++ 
Sbjct: 287 H--AAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEP 343

Query: 350 TL 351
            +
Sbjct: 344 IV 345


>gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
 gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
          Length = 359

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/338 (36%), Positives = 182/338 (53%), Gaps = 15/338 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R + LN   +DP L ++    K +MRE  HL   +    E ++ L        L  EED
Sbjct: 10  KRYAELNDMIQDPELVRDPKRYKEIMREHSHLSQVMDSYAEYKEVLQGISEAQHLITEED 69

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVHAGAGGTESQDWA 134
           D  + +   + L+   LE    + ES L          +  +  +E+  GAGG E+  +A
Sbjct: 70  DHDMKEMAREELK--ALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAGGDEASLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE + +K E ++  + E  G K  +  I G   YG L+ E GVHR+ R+ 
Sbjct: 128 ADLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  +++ EIEI   D R+D  RA G GGQ VNTTDSAVR+TH
Sbjct: 188 ETEAQGRIHTSAVTVAVLPEAEET-EIEIRPEDLRVDVMRAGGPGGQCVNTTDSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV  Q E+SQ KNKA+A  +LRA+L++LE  K++  A    + K+ +G G    +
Sbjct: 247 LPTGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQ--AERSAARKSMVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           IR+Y   P   V D R N+        + G+LD+ + A
Sbjct: 305 IRTYNF-PQNRVTDHRINLTLYKLDQFMQGNLDEMLDA 341


>gi|121608524|ref|YP_996331.1| peptide chain release factor 1 [Verminephrobacter eiseniae EF01-2]
 gi|166223615|sp|A1WI56|RF1_VEREI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121553164|gb|ABM57313.1| bacterial peptide chain release factor 1 (bRF-1) [Verminephrobacter
           eiseniae EF01-2]
          Length = 359

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 179/344 (52%), Gaps = 27/344 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---------NL 70
            QRL  L+     P +  ++++ + + RE   +            R  D         + 
Sbjct: 13  AQRLGELDFLLARPDIMADMVQYRSIAREHAEVTQVAGRYARYLQREADLGAARELLADP 72

Query: 71  ILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            + ELA EE D S   L++  D LQR+ L  E            D+ +A++E+ AG GG 
Sbjct: 73  GMAELAQEEIDSSQTELRQLEDELQRLLLPKEPD----------DARNAFVEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES  +A  L RMYTR+A +R ++ + L  +  E  G K   L I G   YG LK E G H
Sbjct: 123 ESALFAGDLTRMYTRYAARRGWQVQVLSENPAELGGYKEIVLRIDGEQVYGTLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P  D +  I ++ ++ RIDT+RASGAGGQH+N TDS
Sbjct: 183 RVQRVPATETQGRVHTSACTVAVMPEPDPARAIALNPAELRIDTFRASGAGGQHINKTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A+L E E  + E  A      K  IG 
Sbjct: 243 AVRVVHLPTGIVAECQDGRSQHGNKARALQVLQARLQEKE--RSERAAKEAALRKGLIGS 300

Query: 309 GR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G    +IR+Y   P   + D R  +       +LDG+LD  ++A
Sbjct: 301 GERSDRIRTYNF-PQGRLTDHRIQLTLYQLQQLLDGELDPMLQA 343


>gi|160940109|ref|ZP_02087454.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436689|gb|EDP14456.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
          Length = 358

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 194/330 (58%), Gaps = 15/330 (4%)

Query: 32  DPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-QE 87
           DP + Q+      LM+E+  L     A    K+ +  + D+L LLE   +E+   +  +E
Sbjct: 21  DPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVEDSLALLEEESDEEMREMAKEE 80

Query: 88  TSDNLQRIK-LEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            SD  +RI+ LE E K    LL  +  D  +  LE+ AGAGG E+  +A  L RMY+ +A
Sbjct: 81  LSDARKRIEDLEHELKIL--LLPKDPNDDKNIILEIRAGAGGDEAALFAAELYRMYSNYA 138

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           + +++K E + +++    G K    ++ G  AY  LK E GVHR+ R+   +S  R HTS
Sbjct: 139 DSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESGVHRVQRVPETESGGRIHTS 198

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            +++ V P  ++ ++++I  +DCRID  RASG GGQ VNTTDSAVR+TH+PTG+V+  Q 
Sbjct: 199 TATVAVMPEAEE-VDVQIDMNDCRIDVMRASGNGGQCVNTTDSAVRLTHMPTGIVIYSQT 257

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           E+SQ +NK +A+ +LR+KLY++EL+KR+  ++  E  +++IG G    +IR+Y   P   
Sbjct: 258 EKSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIGTGDRSEKIRTYNF-PQGR 314

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           V D R  +       +++GD+ + +   +A
Sbjct: 315 VTDHRIKLTLYKIDSIMNGDIQELLDNLIA 344


>gi|119505822|ref|ZP_01627888.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
 gi|119458320|gb|EAW39429.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
          Length = 362

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 148/241 (61%), Gaps = 10/241 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN+ YLE+ AG GG E+  ++  L RMY+R+AE + ++ E +    G+  G K     +
Sbjct: 109 DSNNVYLEIRAGTGGDEAAIFSGDLFRMYSRYAESKGWRLETISDRAGDHGGFKEIISRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y +LK E G HR+ R+   +S  R HTS  ++ V    DD   I+I + D R+DT
Sbjct: 169 VGNDVYAYLKFESGAHRVQRVPETESQGRIHTSACTVAVMAEPDDVEAIDIRKEDLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSAVRITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L    L   
Sbjct: 229 FRSSGAGGQHVNTTDSAVRITHLPTGVVVECQDERSQHKNRARAMSLLSARL----LTAA 284

Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E+ A+  ++++    +G G    +IR+Y   P   V D R N+      +++ G LD  +
Sbjct: 285 EDKAHSEQAAERRNLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEIVQGQLDALV 343

Query: 348 K 348
           +
Sbjct: 344 Q 344


>gi|254690018|ref|ZP_05153272.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 337

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 19/297 (6%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96
           L  E   L + +  I+E+ D   +     +LA   DD S         ++E  +  +RI 
Sbjct: 48  LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 104

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  +  Q   L    AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E + 
Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 164

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G+  G K     + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D I+IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A
Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
             +LRA+LY++E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+
Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINL 336


>gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
 gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
          Length = 357

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 200/350 (57%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68
           +FD  ++ + R   L  +  +P +  +    + LM+E+   Q + +A    KE +  + D
Sbjct: 1   MFDKLEDLLIRFEELLNELNEPGVASDPAHFQKLMKEQGNLQPIVDAYKEYKECKKTVED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQ-RI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125
           +L +L+   +E+   +L+E  +  + RI +LE E K    LL  +  D  +  +E+ AGA
Sbjct: 61  SLAMLDGESDEEMREMLKEELNTAKDRIAELETELKIL--LLPKDPNDDKNVIMEIRAGA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  + R+Y ++AEKR+++ E L   +    G+K    +I G  AY  LK E 
Sbjct: 119 GGDEAALFAAEMYRLYVKYAEKRRWRVELLNADEIGIGGMKEVNFMITGQGAYSRLKYES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS  ++ V P  ++ +++ I E D RID  RASG GGQ VNT
Sbjct: 179 GVHRVQRVPETESGGRIHTSTVTVAVMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH PTG+VV  Q E+SQ +NKA+A+ +LRAKLY++E QK  +     +  +++
Sbjct: 238 TDSAVRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRAKLYDIEQQKAHDAE--AQLRRSQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IG G    +IR+Y   P   V D R  +       ++DGD+D+ + + +A
Sbjct: 296 IGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKLDSIMDGDIDELLDSLIA 344


>gi|57504876|ref|ZP_00370851.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|305432416|ref|ZP_07401578.1| peptide chain release factor RF1 [Campylobacter coli JV20]
 gi|57019304|gb|EAL56006.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|304444455|gb|EFM37106.1| peptide chain release factor RF1 [Campylobacter coli JV20]
          Length = 355

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 148/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y R+AE R +K E +   +G   G K   +L+
Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  A+  LK E G HR+ R+   +S  R HTS  +I V P VDD IEIEI+ +D +ID 
Sbjct: 164 KGAGAFSRLKYEGGTHRVQRVPQTESQGRIHTSAITIAVMPEVDD-IEIEINPNDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITH+PTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHLPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348
           E +A   E+ K+++G G    +IR+Y   P   + D R N+       +L DG  D+ ++
Sbjct: 281 ERLAQESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINLTLYRLDAILQDGLFDEVIE 339

Query: 349 ATLA 352
             +A
Sbjct: 340 PLIA 343


>gi|254482800|ref|ZP_05096037.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
 gi|214036881|gb|EEB77551.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
          Length = 361

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 16/239 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS++ +LE+ AG GG E+  ++  L RMY+R+AE   +K E L    GE  G K     +
Sbjct: 109 DSHNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAENMGWKVEVLSERHGEHGGYKEIITRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E G HR+ R+   +S  R HTS  ++ + P  +   ++EI+++D R+DT
Sbjct: 169 EGRDVYAHLKFESGAHRVQRVPETESQGRIHTSACTVAIMPEAEAVDQVEINKADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------- 285
           YRASGAGGQHVN TDSAVR+TH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL        
Sbjct: 229 YRASGAGGQHVNKTDSAVRLTHLPSGIVVECQDERSQHKNRARAMSLLQAKLLTSAQDKA 288

Query: 286 -ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            E + ++R  +   G+ S        +IR+Y   P   + D R N+     ++V++GDL
Sbjct: 289 AEEQAEQRRNLVGTGDRSD-------RIRTYNF-PQGRLTDHRINLTLYKLAEVVEGDL 339


>gi|148377997|ref|YP_001256873.1| peptide chain release factor 1 [Mycoplasma agalactiae PG2]
 gi|238686692|sp|A5IZH6|RF1_MYCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148292043|emb|CAL59435.1| Peptide chain release factor 1 [Mycoplasma agalactiae PG2]
          Length = 358

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 39/344 (11%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC--DNL--------ILLELALE 78
           K +DP +  N+       +E   ++  I+ I+EI ++    +N+        I+LE   E
Sbjct: 22  KIDDPEVISNI-------KEYSAINKEIAKIREISEKFITYENILKDVEQAKIMLESKNE 74

Query: 79  ED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           E+      I+ E S  L  ++   E  +   L   E D  +  +E+   AGG E+  +A 
Sbjct: 75  EEVEFAKMIIDENSLKLDELE---EKLKILILPQDENDDKNIIVEIRGAAGGDEANIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+++A++  F+ + L  +     G       IKG  AY   K E GVHR+ R+  
Sbjct: 132 DLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESGVHRVQRVPV 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P +DDS+EIEI  SD +ID +R+SGAGGQ VNTTDSAVRITH+
Sbjct: 192 TESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTTDSAVRITHL 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESSKTEIGW 308
           PT +VV  Q ERSQ  N+  A  +L++KLY+LE+QK+ E       +A  G+ S+     
Sbjct: 252 PTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHGDRSE----- 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R +   TS   +++G L   + A LA
Sbjct: 307 --KIRTYNY-PQDRVTDHRISF-STSLKPIMEGKLTPIIDALLA 346


>gi|241763794|ref|ZP_04761840.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
 gi|241366926|gb|EER61331.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
          Length = 362

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 182/336 (54%), Gaps = 11/336 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            QRL  L+       +  ++ + + + RE   +          Q R  D     E+  + 
Sbjct: 13  AQRLGELDFLLSREDIMADMAQYRTISREHAEVTQIAGRYARYQQREADLAGAREMLADP 72

Query: 80  DDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANM 136
           D   + QE  TS   + ++LE E ++   LL  + D + +A++E+ AG GG ES  +A  
Sbjct: 73  DMAEMAQEEITSAEAELLQLEDELQRL--LLPKDPDDARNAFVEIRAGTGGDESALFAGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+A++  +K E +  +  E  G K   L I+G + YG LK E G HR+ R+   
Sbjct: 131 LTRMYMRYADRVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALKFESGGHRVQRVPAT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  D+   I+++ +D RIDT+RASGAGGQH+N TDSAVR+ H+P
Sbjct: 191 ETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+V +CQ  RSQH NKA+A  +L+A++ E E  + E  A      K  IG G    +IR
Sbjct: 251 TGIVAECQDGRSQHSNKAKALQVLQARIQEKE--RSERAAKEAALRKGLIGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   + D R N+       V+DGDL D ++A
Sbjct: 309 TYNF-PQGRLTDHRINLTLYKLQYVMDGDLADVLQA 343


>gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 356

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/336 (35%), Positives = 180/336 (53%), Gaps = 26/336 (7%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED----- 80
           + T   DP ++ N  + + L +    L   +S  +E +  + +     ELA + D     
Sbjct: 15  IETDLSDPEVFSNQEKYRKLSKSHSELGPIVSTYREYRRIVSEMEENRELARDRDPEIRE 74

Query: 81  ----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
               +   LQE  D L+      E  + + + S   D  +  LE+ AG GG E+  +A  
Sbjct: 75  LAQAELETLQEEKDRLE------EDLKIQLVPSDPLDDKNIILEIRAGTGGEEAALFAAD 128

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+AE+R +K E L + +    GIK     I G   Y  LK E GVHR+ R+   
Sbjct: 129 LFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESGVHRVQRVPET 188

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P  ++ +++ I  +D R+D +RASG GGQ VNTTDSAVRITHIP
Sbjct: 189 ESQGRVHTSAVTVAILPEAEE-VDVNIEPNDLRVDVFRASGPGGQSVNTTDSAVRITHIP 247

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQ 311
           TG+VV CQ E+SQHKN+A+A  +LR++L ++  E QKRE      ++ + ++G G    +
Sbjct: 248 TGLVVSCQDEKSQHKNRAKALKVLRSRLLQIMEEEQKRE----YDDNRRAQVGSGDRSER 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           IR+Y   P   V D R N+   +   V+ G LD  +
Sbjct: 304 IRTYNF-PQSRVTDHRINLTLYNLESVMQGHLDGII 338


>gi|167464538|ref|ZP_02329627.1| peptide chain release factor 1 [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 357

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 152/240 (63%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +EV   AGG E+  +A  L RMY+R+AE + +KTE L+ +  +  G K  T +I
Sbjct: 107 DNKNVIVEVRGAAGGDEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ RI   +S  R HTS S++ V P ++D I+IEI +SD R+DT
Sbjct: 167 KGNGAYSKLKYESGAHRVQRIPVTESGGRIHTSTSTVAVMPEMED-IDIEIKDSDIRVDT 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+TH+PTG+V  CQ  +SQ+ NKA+A  +LRA++Y+ ++++ 
Sbjct: 226 FCSSGAGGQSVNTTKSAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD-QVRQE 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE    GE  K+++G G    +IR+Y   P   V D R  +       +L GDL++ + A
Sbjct: 285 EEAKYAGE-RKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITA 342


>gi|297182948|gb|ADI19096.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_34A12]
          Length = 353

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LEV AG GG E+  +A+ L  MY R+A K  ++ E +E+ +    G K AT  I
Sbjct: 102 DSRNAILEVRAGTGGDEAALFASDLFGMYQRFAGKHGWRFEVMEVSETGIGGYKEATANI 161

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   ++  R HTS +++ V P  +D ++I++ ESD RID 
Sbjct: 162 AGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIDVQESDLRIDV 220

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + 
Sbjct: 221 FRASGPGGQSVNTTDSAVRITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARL 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           +  A    S K ++G G    +IR+Y   P   V D R N+       V+ G+ LD+ ++
Sbjct: 281 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVE 337

Query: 349 ATLA 352
           A +A
Sbjct: 338 ALVA 341


>gi|193214860|ref|YP_001996059.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
 gi|238692722|sp|B3QYI4|RF1_CHLT3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193088337|gb|ACF13612.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
          Length = 358

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 156/241 (64%), Gaps = 4/241 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSAT 169
           EADS +A +E+ AGAGG E+  +A  LLRMY R+AE+  +K E L+ ++     G K AT
Sbjct: 104 EADSRNAMVEIRAGAGGDEAALFAADLLRMYQRFAERNGWKCEVLDYNESSGLGGFKEAT 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G + YG +K E GVHR+ R+   ++  R HTS +S+ V P  +D  +IEI + D +
Sbjct: 164 ISLSGDDVYGTMKFESGVHRVQRVPETETQGRVHTSAASVAVLPEAED-FDIEIRKEDLQ 222

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +DTYR+ G GGQ+VN  ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY+++L
Sbjct: 223 MDTYRSGGKGGQNVNKVETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKL 282

Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            ++++E A++  S  +      +IR+Y   P   V D R      +   +LDGDL + ++
Sbjct: 283 AEQQKERADLRRSMVSTGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQLLDGDLFEIIE 341

Query: 349 A 349
           A
Sbjct: 342 A 342


>gi|83942386|ref|ZP_00954847.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
 gi|83846479|gb|EAP84355.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
          Length = 351

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 150/256 (58%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L   EAD   A LE+  G GG E+  +A  LLRMY R+AE R +K E +E    E 
Sbjct: 92  QLALLPRDEADKKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEARGWKVELIEQQFTEL 151

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K     IKG N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I 
Sbjct: 152 GGVKEVVAHIKGENVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIH 210

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+A
Sbjct: 211 IDANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKA 269

Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LY++E Q+ +        A +G   ++E     +IR+Y   P   + D R N+      
Sbjct: 270 RLYDMERQRVDSERSASRAAQVGSGDRSE-----RIRTYNF-PQGRLTDHRINLTLYRLE 323

Query: 337 DVLDGDLDDFMKATLA 352
            V+ GDLD+ + A  A
Sbjct: 324 AVMQGDLDEIVDALTA 339


>gi|254238595|ref|ZP_04931918.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
 gi|126170526|gb|EAZ56037.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
          Length = 360

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LE+ AG  G E+  ++  L RMY+R+AE++ ++ E L  ++GE  G K     +
Sbjct: 109 DSRNVFLEIRAGTCGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +    
Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++      + K  +G G    +IR+Y   P   V D R N+   S  +V++G ++  ++ 
Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
 gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
          Length = 364

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY ++ E + ++ E +   +GE  G K     +
Sbjct: 109 DDCNCFLEIRAGTGGDEAALFAGELYRMYAKYCEAKGWQLEVVSQSEGEVGGYKEIIAKL 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG++K E G HR+ R+   ++  R HTS  ++ V P +  S   E++ +D RIDT
Sbjct: 169 SGEGAYGYMKFESGGHRVQRVPATEAQGRVHTSACTVMVLPEIPPSKAPEVNPADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSA+RITHIPTG+VV+CQ ERSQH+N+ +A  +L ++L ++E  KR
Sbjct: 229 FRASGAGGQHINKTDSAIRITHIPTGIVVECQDERSQHRNRERAMEVLLSRLAKMEEDKR 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +A   E+  + +  G    +IR+Y   P   V D R N+     S+VL+G+LD  +K 
Sbjct: 289 --LAEQTEARHSILSSGDRSDRIRTYNF-PQSRVTDHRINLTLYRLSEVLEGNLDLILKP 345

Query: 350 TL 351
            +
Sbjct: 346 VI 347


>gi|225175858|ref|ZP_03729851.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
 gi|225168782|gb|EEG77583.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
          Length = 356

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +EV AG GG E+  +A  L RMYTR+AE++ +KTE L+ ++ +  G K     I
Sbjct: 106 DDKNVIVEVRAGTGGDEAALFAGDLFRMYTRYAERQGWKTEVLDANETDIGGFKEVVFAI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  +D +E++I+++D RID 
Sbjct: 166 EGDGAYSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VEVDINQNDLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+P+G+VV CQ E+SQHKNK +A  +LRA+L+E   ++ 
Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHLPSGIVVSCQDEKSQHKNKDKAMRVLRARLFEKAQEEA 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                   + KT++G G    +IR+Y   P   V D R  +        LDGDLD+ + A
Sbjct: 285 AAEQA--AARKTQVGSGDRSERIRTYNF-PQGRVSDHRIGMTLYKLDQFLDGDLDEMVDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
 gi|238692126|sp|B3E628|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
          Length = 355

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/343 (36%), Positives = 184/343 (53%), Gaps = 24/343 (6%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILL----- 73
           R   L +   DP +  N  E + L RE   L   I      K++ D L +N  LL     
Sbjct: 11  RFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEENQELLADPEM 70

Query: 74  -ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E+A EE     +   S   +R+  E+   +   L     DS D  LE+ AG GG ES  
Sbjct: 71  KEMAEEE-----ISRLSQEKERLDAEI---KILLLPKDPNDSRDVILEIRAGTGGDESAL 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEK ++K E L   + E  G K     I+G + Y  LK E G HR+ R
Sbjct: 123 FSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESGTHRVQR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ +    +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRI
Sbjct: 183 VPETEAQGRIHTSACTVAIMAEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV CQ+ERSQ KN+A+A  +L+ ++  L+  ++E+ A +    K ++G G   
Sbjct: 242 THIPTGTVVACQEERSQIKNRAKAMKVLKTRI--LDTIQQEQNAKLAADRKQQVGSGDRS 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   + D R  +       ++ GD+++   A  A
Sbjct: 300 ERIRTYNF-PQGRMTDHRIGLTLYRLDSIMAGDIEEITDALRA 341


>gi|78484734|ref|YP_390659.1| peptide chain release factor 1 [Thiomicrospira crunogena XCL-2]
 gi|119361633|sp|Q31IN8|RF1_THICR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78363020|gb|ABB40985.1| bacterial peptide chain release factor 1 (bRF-1) [Thiomicrospira
           crunogena XCL-2]
          Length = 363

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 190/338 (56%), Gaps = 17/338 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLILLE 74
            +N V+RL  +N    DP +  N  + + L +E   L   + +F + IQ++   +L   +
Sbjct: 9   LENLVERLDEVNHLISDPEIINNQNKFRNLTKEHSQLTPVVETFNQFIQNQ--GDLQEAK 66

Query: 75  LALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGT 128
             ++  D  + +   + L     Q+  LE E ++   LL  +  D  + +LE+ AG GG 
Sbjct: 67  DMIKSGDPDLKEMGQEELPELEKQQATLEAELQKM--LLPKDPNDDANIFLEIRAGTGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE  +++ E +   +GE  G K     I G  AY  LK E G H
Sbjct: 125 EAAIFAGDLFRMYSRYAETMRWQVEVINSQEGEHGGYKEIIARIIGDGAYSRLKFESGAH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ + P   D  +I+++ +D ++DT+RASGAGGQHVN TDS
Sbjct: 185 RVQRVPATETQGRVHTSAATVVIMPEAQDVEQIDLNPADLKVDTFRASGAGGQHVNKTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITHIPTG VV+CQ ERSQHKN+A+A ++L +++  ++ ++R     I +  K+ +G 
Sbjct: 245 AIRITHIPTGTVVECQDERSQHKNRARAMSLLASRI--MDERQRIHDQEIAQERKSLVGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           G    +IR+Y   P   V D R N+      +++ G L
Sbjct: 303 GDRSERIRTYNY-PQGRVTDHRINLTLYKLDEIMQGGL 339


>gi|323136601|ref|ZP_08071682.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
 gi|322397918|gb|EFY00439.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
          Length = 356

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/314 (38%), Positives = 178/314 (56%), Gaps = 14/314 (4%)

Query: 45  LMRERQHLDNAISFIKEIQD--RLCDNL--ILLELALEEDDCSILQETSDNLQRIKLEVE 100
           L RER  LD+ +  I+  +D  R  D+L  +L + +L+ +    L E+  +  R KLE  
Sbjct: 33  LSRERATLDDVVDAIRAWRDAQREVDDLAAMLADSSLDPE-MRALAESETDGAREKLEAA 91

Query: 101 YK--QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
               +   L   EAD     LEV AG GG E+  +A  L R Y ++A  + ++ E +   
Sbjct: 92  ANTLRLALLPKDEADEKGVILEVRAGTGGDEAALFAGDLFRAYQKYAALKGWRVELVSES 151

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            G   G K     I G   YG LK E GVHR+ R+   ++  R HTS +++ V P  +D 
Sbjct: 152 PGALGGFKEIVAEIIGRGVYGRLKFESGVHRVQRVPETETQGRIHTSAATVAVLPQAED- 210

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           ++I+I E D +IDT RA GAGGQHVN T+SA+RITHIP+G+VV  Q+ERSQH+NKA+A N
Sbjct: 211 VDIDIDEKDLQIDTMRAQGAGGQHVNKTESAIRITHIPSGIVVMMQEERSQHRNKAKAMN 270

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +LR++LY+ E Q+ ++     +  K ++G G    +IR+Y   P   V D R N+     
Sbjct: 271 VLRSRLYDAERQRLDK--ERSDDRKQQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKL 327

Query: 336 SDVLDGDLDDFMKA 349
             V++G+ D+ + A
Sbjct: 328 DRVMEGEFDEIIDA 341


>gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
 gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
          Length = 360

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 19/346 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL 
Sbjct: 10  DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69

Query: 77  LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               D S+       L+   D + R+  E+   Q   L     D  + ++E+ AG GG E
Sbjct: 70  A---DASMRDFAEDELRGARDRMGRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR
Sbjct: 124 SALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THI TG+VV+CQ +RSQHKNK +A  +L A++   + Q  E+ A    + K+ IG G
Sbjct: 244 VRVTHISTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|322383119|ref|ZP_08056946.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321152781|gb|EFX45407.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 356

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 152/240 (63%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +EV   AGG E+  +A  L RMY+R+AE + +KTE L+ +  +  G K  T +I
Sbjct: 106 DNKNVIVEVRGAAGGDEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ RI   +S  R HTS S++ V P ++D I+IEI +SD R+DT
Sbjct: 166 KGNGAYSKLKYESGAHRVQRIPVTESGGRIHTSTSTVAVMPEMED-IDIEIKDSDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+TH+PTG+V  CQ  +SQ+ NKA+A  +LRA++Y+ ++++ 
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD-QVRQE 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE    GE  K+++G G    +IR+Y   P   V D R  +       +L GDL++ + A
Sbjct: 284 EEAKYAGE-RKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITA 341


>gi|59711375|ref|YP_204151.1| peptide chain release factor 1 [Vibrio fischeri ES114]
 gi|197334513|ref|YP_002155529.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
 gi|75431754|sp|Q5E6T3|RF1_VIBF1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690273|sp|B5FBX0|RF1_VIBFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59479476|gb|AAW85263.1| peptide chain release factor RF-1 [Vibrio fischeri ES114]
 gi|197316003|gb|ACH65450.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
          Length = 362

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/319 (36%), Positives = 182/319 (57%), Gaps = 11/319 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L RE   L+      +  +    D +   E+A +EDD  + +   + 
Sbjct: 25  DPDVIGDQNKFRALSREYSQLEEVTQCFQAYEQAQEDLVAAQEMA-QEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKDAKEAIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAGIFAGNLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 KGWRVEVMSSNEAEHGGYKEMIAKVSGEGAYGVLKFESGGHRVQRVPETESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A++  ++ ++    A + ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMSVLAARI--IQAEEARRAAAVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDL 343
           D R N+     ++V++GDL
Sbjct: 321 DHRINLTVYRLNEVMEGDL 339


>gi|17547620|ref|NP_521022.1| peptide chain release factor 1 [Ralstonia solanacearum GMI1000]
 gi|20139328|sp|Q8XVD0|RF1_RALSO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17429924|emb|CAD16608.1| probable peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum GMI1000]
          Length = 360

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K   + +
Sbjct: 107 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 227 FRASGAGGQHINKTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDL + + A
Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|268610024|ref|ZP_06143751.1| peptide chain release factor 1 [Ruminococcus flavefaciens FD-1]
          Length = 357

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 147/238 (61%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +AN L RMYT +AE R +K E L  +  E  G K  +  I
Sbjct: 107 DDKNVIIEIRGGAGGEEASLFANSLYRMYTMYAEARGWKQEVLSANPTELGGFKEISFSI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS  ++ V    DD +E+EI+ +D +ID 
Sbjct: 167 EGEGAYSRLKYESGVHRVQRVPETESQGRIHTSTVTVAVLVEADD-VELEINPTDLKIDY 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N T+SAVRIT++PT VVV+CQ ERSQHKNK +A  +LR+++Y  E  ++
Sbjct: 226 FRASGAGGQHINKTESAVRITYLPTNVVVECQDERSQHKNKDKAMKILRSRIY--EAMQQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E+   I    ++++G G    +IR+Y   P   + D R  +      D+L+G+LD+  
Sbjct: 284 EQNDKIASERRSQVGTGDRSERIRTYNY-PQGRLTDHRIGLTIYRLEDILNGNLDEVF 340


>gi|299065550|emb|CBJ36721.1| peptide chain release factor RF-1 [Ralstonia solanacearum CMR15]
          Length = 356

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K   + +
Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRL 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT
Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 223 FRASGAGGQHINKTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   + D R N+       ++DGDL + + A
Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGA 339

Query: 350 TLA 352
             A
Sbjct: 340 LAA 342


>gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           18P13]
          Length = 361

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 14/338 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLILLELAL 77
           Q+   ++ +  DP +  ++     LM+E ++L+  +      K     + +   LL+   
Sbjct: 10  QKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQEARELLDAGS 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134
           E+ +   + +     ++ +L  EY +   +L    D ND     +E+  GAGG E+  +A
Sbjct: 70  EDPELREMAQAEFETEKEQL-AEYAEQLKILLLPKDPNDDRNVIIEIRGGAGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           N L RMYT +AE R +K E L  +  E  G K  +  I G  AY  LK E GVHR+ R+ 
Sbjct: 129 NSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V  V  D +E+ I+ +D +ID +R+SGAGGQH+N T+SAVRITH
Sbjct: 189 ETESQGRIHTSTVTVAVL-VEADEVELAINPTDLKIDVFRSSGAGGQHINKTESAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQ KNK +A  +LR++LYE   Q++++   I    + ++G G    +
Sbjct: 248 LPTGLVVECQDERSQFKNKDRAMMILRSRLYERMQQEQQD--KIASQRRMQVGTGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           IR+Y   P   + D R  +      DV++G+LD+ + A
Sbjct: 306 IRTYNF-PQGRLTDHRIGLTIYRLEDVMNGNLDEVLDA 342


>gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
 gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
          Length = 362

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 189/355 (53%), Gaps = 25/355 (7%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +   S L  +  DP L  +   A+ + +    L   ++  ++++    D     ELA
Sbjct: 10  DDILAEYSGLEQQMSDPALHNDASAARKVGKRFAELAPIMATHRKLEAAREDRAAAQELA 69

Query: 77  LEE----DDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTES 130
            ++    D+ ++L E  D L+        +Q   LL+     DS+D  LEV +G GG ES
Sbjct: 70  ADDSSFADEVTVLTEQIDALE--------QQLTDLLAPRDPHDSDDVVLEVKSGEGGEES 121

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--GPNAYGWLKG----- 183
             +A  L RMY R+AE+R +K E L     +  G K AT  IK  GP A G + G     
Sbjct: 122 ALFAGDLARMYLRYAEQRGWKVETLGATYSDLGGYKDATFAIKSRGPGADGAIDGVWARM 181

Query: 184 --EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHR+ R+   +S  R HTS + + VYP  D+  E++I ESD RID YR+SG GGQ
Sbjct: 182 KFEGGVHRVQRVPATESQGRIHTSAAGVLVYPEPDEVEEVQIDESDLRIDVYRSSGKGGQ 241

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PT +VV CQ ERSQ +NKA+A  +L A+L  L  ++ E  A+   +
Sbjct: 242 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLQALREEEAEAAASDSRA 301

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++   +    +IR+Y   P   + D R   +  +   VLDG+LD  + A  A  +
Sbjct: 302 AQIRTVDRSERIRTYNF-PENRIADHRIGFKAHNLDQVLDGELDPLLDALQAADR 355


>gi|297181089|gb|ADI17288.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_17D04]
          Length = 359

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LEV AG GG E+  +A+ L  MY R+A K  ++ E +E+ +    G K AT  I
Sbjct: 108 DSRNAILEVRAGTGGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   ++  R HTS +++ V P  +D ++I++ ESD RID 
Sbjct: 168 AGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIDVQESDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVRITHIPTG++V  Q E+SQHKN+A+A  +LRA+LY+ E  + 
Sbjct: 227 FRASGPGGQSVNTTDSAVRITHIPTGIMVSQQDEKSQHKNRAKAMKILRARLYDAERARL 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           +  A    S K ++G G    +IR+Y   P   V D R N+       V+ G+ LD+ ++
Sbjct: 287 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVE 343

Query: 349 ATLA 352
           A +A
Sbjct: 344 ALVA 347


>gi|163739713|ref|ZP_02147121.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
 gi|161386943|gb|EDQ11304.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
          Length = 351

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 163/294 (55%), Gaps = 15/294 (5%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           LCD     ++  + D   + +E    L+    E E+  Q   L   EAD+  A LE+  G
Sbjct: 54  LCDLEEAEQMLADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPG 113

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +A  LLRMY R+AE R +  E +E    E  G+K     +KG N +  LK E
Sbjct: 114 TGGDEAALFAGDLLRMYQRYAEARGWGFEIIEEQTTELGGLKEVVAHVKGENVFARLKYE 173

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +++ V P  +D +++ I   D RIDT RASGAGGQHVN
Sbjct: 174 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDLRIDPGDLRIDTMRASGAGGQHVN 232

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIANI 298
           TTDSAVRITHIPTG++V    E+SQH+N+  A  ++R +LY+LE Q+       +  + +
Sbjct: 233 TTDSAVRITHIPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRASQV 291

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G   ++E     +IR+Y   P   + D R N+       ++ GDLD+ + A  A
Sbjct: 292 GSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTA 339


>gi|295677813|ref|YP_003606337.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
 gi|295437656|gb|ADG16826.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
          Length = 360

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 148/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE+ +++ E +   + +  G +   + I
Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT
Sbjct: 167 AGDAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A  +L A++   + Q  
Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQTH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+      + K  IG G    +IR+Y   P   + D R N+       ++DGDL++ + A
Sbjct: 285 EQQTKEAATRKNLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLEELIAA 343

Query: 350 TLA 352
            ++
Sbjct: 344 LVS 346


>gi|160878572|ref|YP_001557540.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
 gi|189039966|sp|A9KHD4|RF1_CLOPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160427238|gb|ABX40801.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
          Length = 358

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +E+  GAGG E+  +A  L RMY+++AE  ++K + + +++    G K    +I
Sbjct: 106 DSKNVIVEIRGGAGGDEAALFAAELFRMYSKYAETMRWKIDMMNLNENGIGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   +S  R HTS  ++ + P  ++ +++E++ +DCR D 
Sbjct: 166 NGQGAYSKLKYESGVHRVQRIPVTESGGRIHTSTVTVAIMPEAEE-VDVELNMNDCRFDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVR+TH+PTG+V+ CQ E+SQ KN+ +A  +LRA+LYELEL+K 
Sbjct: 225 FRSSGNGGQCVNTTDSAVRLTHMPTGIVISCQDEKSQLKNRDKALKVLRARLYELELEKA 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +      + K+++G G    +IR+Y   P     D R  +      D+++GDL + + +
Sbjct: 285 HDAE--AAARKSQVGTGDRSEKIRTYNF-PQGRCTDHRIKLTSHRLDDIMNGDLQEVIDS 341

Query: 350 TLA 352
             A
Sbjct: 342 LTA 344


>gi|319795450|ref|YP_004157090.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
 gi|315597913|gb|ADU38979.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
          Length = 362

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 6/246 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A++E+ AG GG ES  +A  LLRMYTR+ E+   + E +     E  G K   + I
Sbjct: 107 DARNAFMEIRAGTGGDESALFAGDLLRMYTRYCERAGLRCEIVSESASELGGYKEVVIRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G L+ E G HR+ R+   ++  R HTS  ++ V    D+++ ++I+ +D RIDT
Sbjct: 167 VGDEVFGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITHIPTG+V +CQ +RSQH+NKA+A  +L A++ E +  + 
Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKD--RS 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K  IG G    +IR+Y   P   + D R N+       +++GDL D ++A
Sbjct: 285 ERAAKDAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVLEA 343

Query: 350 TLAIKK 355
             A ++
Sbjct: 344 LRAARE 349


>gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189039983|sp|A4SV43|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 359

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 149/240 (62%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMYTR+AE++ +K E +   + +  G K   L +
Sbjct: 107 DERNVFLEIRAGTGGDESALFAGDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   ++  R HTS  ++ V P  D+   ++I+ ++ RIDT
Sbjct: 167 VGQSVYSRLKFESGGHRVQRVPQTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITHIPTG VV+CQ +RSQH+N+ QA  +L +++  ++ ++R
Sbjct: 227 FRASGAGGQHINKTDSAVRITHIPTGTVVECQDDRSQHRNREQAMKVLVSRI--MDARER 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+     ++ K+ IG G    +IR+Y   P   + D R N+       ++DGD+DD   A
Sbjct: 285 EKHQLEAQTRKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNA 343


>gi|282889838|ref|ZP_06298377.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500412|gb|EFB42692.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 354

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/278 (39%), Positives = 166/278 (59%), Gaps = 18/278 (6%)

Query: 84  ILQETSDNLQRI--KLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLL 138
           +L+E + NL+ +  KL+V+    E+LL    D ND     +E+ AG GG E+  +    +
Sbjct: 76  VLEEDTRNLRSLVEKLQVD---LENLLV-PPDPNDHRNTIVELRAGTGGDEAALFVGDCV 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY  +A+ + ++ E L     E  G K   +++ G N Y +L  E G HR+ R+   ++
Sbjct: 132 RMYKLYADSKGWRYELLSCTPSEMGGFKEYVMVLSGQNVYRFLHYEGGTHRVQRVPETEA 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ +    D+  E+ I E D R+DTYR+SGAGGQHVNTTDSAVR+TH PTG
Sbjct: 192 QGRVHTSAMTVAILLEPDEDTEVVIDEKDLRVDTYRSSGAGGQHVNTTDSAVRLTHNPTG 251

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV CQ+ERSQHKNK +A  +L+AK+ E E +K++E   I  +   ++G G    +IR+Y
Sbjct: 252 IVVYCQEERSQHKNKEKAMRLLKAKIVEAEQRKKQE--EIASNRSQQVGSGDRSERIRTY 309

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              P   + D R N+ + +   V++GDLD+    TLA+
Sbjct: 310 NF-PQNRITDHRINLTRYNLDRVMEGDLDEI---TLAL 343


>gi|15925108|ref|NP_372642.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927692|ref|NP_375225.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283771|ref|NP_646859.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486911|ref|YP_044132.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652140|ref|YP_186925.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160795|ref|YP_494718.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196022|ref|YP_500835.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148268569|ref|YP_001247512.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394633|ref|YP_001317308.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|151222234|ref|YP_001333056.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980433|ref|YP_001442692.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510323|ref|YP_001575982.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141637|ref|ZP_03566130.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315787|ref|ZP_04839000.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253731044|ref|ZP_04865209.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733048|ref|ZP_04867213.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006906|ref|ZP_05145507.2| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793876|ref|ZP_05642855.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|258407044|ref|ZP_05680194.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|258422066|ref|ZP_05684983.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|258433565|ref|ZP_05688638.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|258440460|ref|ZP_05690630.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|258445668|ref|ZP_05693846.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|258450122|ref|ZP_05698217.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|258453423|ref|ZP_05701405.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|262049285|ref|ZP_06022160.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262052620|ref|ZP_06024814.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|269203754|ref|YP_003283023.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894762|ref|ZP_06302988.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|282923106|ref|ZP_06330791.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282929042|ref|ZP_06336627.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|284025152|ref|ZP_06379550.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           132]
 gi|294850088|ref|ZP_06790825.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|295407048|ref|ZP_06816850.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296275403|ref|ZP_06857910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297210061|ref|ZP_06926454.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246047|ref|ZP_06929904.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300910424|ref|ZP_07127876.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304379299|ref|ZP_07362038.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54039049|sp|P66019|RF1_STAAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54039050|sp|P66020|RF1_STAAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041594|sp|P66018|RF1_STAAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56749376|sp|Q6G7J2|RF1_STAAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153097|sp|Q5HE82|RF1_STAAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361613|sp|Q2FF10|RF1_STAA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361614|sp|Q2FWE0|RF1_STAA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223609|sp|A7X4W4|RF1_STAA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172048990|sp|A6QIW2|RF1_STAAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039994|sp|A6U3K3|RF1_STAA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039995|sp|A5IUR3|RF1_STAA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039996|sp|A8YY83|RF1_STAAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13701912|dbj|BAB43204.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247891|dbj|BAB58280.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21205213|dbj|BAB95907.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245354|emb|CAG43829.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286326|gb|AAW38420.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126769|gb|ABD21283.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203580|gb|ABD31390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741638|gb|ABQ49936.1| bacterial peptide chain release factor 1 (bRF-1) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149947085|gb|ABR53021.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375034|dbj|BAF68294.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722568|dbj|BAF78985.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160369132|gb|ABX30103.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253725232|gb|EES93961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728956|gb|EES97685.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787848|gb|EEV26188.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|257841377|gb|EEV65821.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|257841966|gb|EEV66398.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|257849296|gb|EEV73275.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|257852529|gb|EEV76447.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|257855507|gb|EEV78444.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|257856596|gb|EEV79502.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|257864404|gb|EEV87150.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|259159490|gb|EEW44540.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|259162650|gb|EEW47217.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262076044|gb|ACY12017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941717|emb|CBI50124.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282589348|gb|EFB94440.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|282593297|gb|EFB98294.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282762850|gb|EFC02984.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|285817782|gb|ADC38269.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981]
 gi|294823036|gb|EFG39468.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|294968073|gb|EFG44100.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296885261|gb|EFH24201.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177046|gb|EFH36301.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300888266|gb|EFK83457.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302751999|gb|ADL66176.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342158|gb|EFM08058.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312830470|emb|CBX35312.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128789|gb|EFT84789.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196948|gb|EFU27290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140710|gb|EFW32562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143686|gb|EFW35463.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314803|gb|AEB89216.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723967|gb|EGG60491.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726324|gb|EGG62792.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729314|gb|EGG65722.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 358

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 192/347 (55%), Gaps = 17/347 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125
              +L    ++++  +L+E S+ ++     LE E K    L+  +  D  D  +E+ A A
Sbjct: 61  IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKIL--LIPKDPNDDKDVIVEIRAAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E 
Sbjct: 119 GGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ 
Sbjct: 238 TDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSA 294

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +G G    +IR+Y   P   V D R  +       +++G L++ + A
Sbjct: 295 VGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340


>gi|134301001|ref|YP_001114497.1| peptide chain release factor 1 [Desulfotomaculum reducens MI-1]
 gi|134053701|gb|ABO51672.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfotomaculum
           reducens MI-1]
          Length = 356

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 190/338 (56%), Gaps = 13/338 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78
           R   L ++  DP +  +  + + L++    L   +      K+ ++ L +N  +LE  LE
Sbjct: 11  RFEQLESQISDPEVMADRAKWQQLVKSHSDLAEVVDVFRQYKKAKEDLQENKQMLEDKLE 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136
            D   +++   + L   K+E +  + + LL      D  +  +E+  G GG E+  +A  
Sbjct: 71  PDFREMVELEIEELTS-KIEEQENKLKILLLPKDPNDDKNVIMEIRGGTGGDEAALFAGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+R+AEK+ ++TE ++ ++ +  G K  T +I+G  A+  LK E GVHR+ R+   
Sbjct: 130 LFRMYSRYAEKKGWRTEIIDANETDLGGFKEVTFVIEGKGAFSTLKFESGVHRVQRVPAT 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P  ++ ++I+I+ +D RID + ASG GGQ VNTT SAVRITHIP
Sbjct: 190 ESGGRIHTSAATVAVLPEAEE-VDIDINANDIRIDLFCASGPGGQCVNTTQSAVRITHIP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG VV CQ E+SQHKNK +A  +LRA+L  L+  + E+   I  + K+ +G G    +IR
Sbjct: 249 TGTVVSCQDEKSQHKNKDKAMRVLRARL--LDKAQDEQQKAIAGARKSMVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   + D R  +       VL GDLD+ + A +
Sbjct: 307 TYNF-PQNRITDHRIGLTLHRLEYVLQGDLDELIDALI 343


>gi|254447802|ref|ZP_05061267.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
 gi|198262582|gb|EDY86862.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
          Length = 358

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/338 (35%), Positives = 187/338 (55%), Gaps = 13/338 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N V R   +     DP +  +    + L +E   L+       E Q +  DNL   E  
Sbjct: 10  ENLVARHEEVGMLLSDPDVINDQNRFRDLSKEYAELEPVTKTFSEYQTQ-SDNLSTAEEM 68

Query: 77  LEEDDCSILQETSDNLQRIKLE--VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L++ D   + +   +  R+++E   +  Q   L S   D+++ Y+E+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMAQEEIDSARVEIERLEQELQILLLPSDPHDNSNIYVEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE + ++ E     +GE  G K     I G  A+  +K E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAENQGWRVELQAESEGEHGGYKEVIARIIGQGAFSKMKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P +D+    +I+ +D RIDT+RASGAGGQHVN TDSA+RITH
Sbjct: 189 ETESQGRIHTSAATVAIMPEIDEVEAPDINPADLRIDTFRASGAGGQHVNKTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQKREEIANIGESSKTEIGWG--- 309
           +PTG+VV+ Q ERSQHKN+A+A + L++K+   E + Q +E+ A    + K+ +G G   
Sbjct: 249 VPTGIVVESQAERSQHKNRARAMSQLQSKIIQGERDKQAQEQAA----TRKSLVGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R N+      DV+ G L+  +
Sbjct: 305 ERIRTYNF-PQGRVTDHRINLTLYKLDDVMGGGLEQVI 341


>gi|317121004|ref|YP_004101007.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
 gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
          Length = 381

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 179/330 (54%), Gaps = 21/330 (6%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP  WQ       L +ER  L+  +   +  ++   D      L  E DD       +  
Sbjct: 52  DPRRWQP------LAQERAELEPLVDAYRRWREAGADLEAARALLRETDDADEHAYLTAE 105

Query: 92  LQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           ++R  LE E ++ E  L          D  D  +E+ AG GG E+  +A  L RMY R+A
Sbjct: 106 VER--LEAERQRLERTLRSLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGDLFRMYQRYA 163

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ ++TE +   + +  G K     + G  A+  LK E GVHR+ R+   ++  R HTS
Sbjct: 164 ERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLKHESGVHRVQRVPVTEAAGRIHTS 223

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            +++ V P  ++ +E++I   D  IDT+ ASG GGQHVN T+SAVRITH PTG+VV CQ 
Sbjct: 224 TATVAVLPEAEE-VEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPTGIVVTCQD 282

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQHKN+A+A  +LRA+L +   ++++E   + +  ++++G G    +IR+Y  +  + 
Sbjct: 283 ERSQHKNRARAMKILRARLLDYYTRRQQE--ELSQQRRSQVGTGERSEKIRTYNFRENR- 339

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           V D R  +      +++DGDLD+ + A  A
Sbjct: 340 VTDHRIGLTLYRLQEIMDGDLDELLDALAA 369


>gi|221124304|ref|XP_002161242.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 281

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 146/248 (58%), Gaps = 14/248 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+  A++E+ AG GG ES  +A  L RMYTR+ + +  +TE +   + E  G K   L I
Sbjct: 19  DARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASESELGGYKEVVLRI 78

Query: 173 KGP--------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +G          AYG LK E G HR+ R+   ++  R HTS  +I V    D++  I+I+
Sbjct: 79  EGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVLAEQDEAEAIKIN 138

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ  RSQH NKAQA  +L A++
Sbjct: 139 PSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSNKAQALKVLTARI 198

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +E +  + E  A      K+ +G G    +IR+Y   P   + D R N+        ++G
Sbjct: 199 HEKD--RSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRINLTLYKLDRAMEG 255

Query: 342 DLDDFMKA 349
           DLDD ++A
Sbjct: 256 DLDDVIEA 263


>gi|146277160|ref|YP_001167319.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17025]
 gi|166223594|sp|A4WRK0|RF1_RHOS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145555401|gb|ABP70014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 351

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/340 (37%), Positives = 187/340 (55%), Gaps = 18/340 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V+R  FL  +           E   L RE   L   ++ I   +  L D L   E  L +
Sbjct: 11  VRRFEFLEARLSA---GAAPAEIAALSREYAELKPVVAEIAAYRTALED-LAEAEAMLAD 66

Query: 80  DDCSILQETSDNLQRIKL---EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
            +   L E  D L R++    E+E     +LL  +A D+  A LE+  G GG E+  +A 
Sbjct: 67  PEMRALAE--DELPRLRARIPEMEQALRLALLPRDAADARPAILEIRPGTGGEEAALFAG 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LLRMY R+AE + ++ E L++   E  GI+ AT  I+G  A+  LK E GVHR+ R+  
Sbjct: 125 DLLRMYQRYAEAQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQRVPE 184

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            ++  R HTS +++ V P  ++ ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH+
Sbjct: 185 TEAQGRIHTSAATVAVLPEAEE-VDIAIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHL 243

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV    E+SQH+N+  A  +LRA+LY+LE Q+  E  +     K ++G G    +I
Sbjct: 244 PTGIVV-TSSEKSQHRNREIAMQVLRARLYDLERQRLAEARSA--DRKAQVGSGDRSERI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   + D R N+   +   ++ GDL + + A  A
Sbjct: 301 RTYNF-PQGRMTDHRINLTLYALPQIMAGDLAEVIAALTA 339


>gi|83953606|ref|ZP_00962327.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
 gi|83841551|gb|EAP80720.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
          Length = 351

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 150/256 (58%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L   EAD   A LE+  G GG E+  +A  LLRMY R+AE R +K E +E    E 
Sbjct: 92  QLALLPRDEADKKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEARGWKFELIEQQFTEL 151

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K     IKG N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I 
Sbjct: 152 GGVKEVVAHIKGENVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIH 210

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+A
Sbjct: 211 IDANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKA 269

Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LY++E Q+ +        A +G   ++E     +IR+Y   P   + D R N+      
Sbjct: 270 RLYDMERQRVDSERSASRAAQVGSGDRSE-----RIRTYNF-PQGRLTDHRINLTLYRLE 323

Query: 337 DVLDGDLDDFMKATLA 352
            V+ GDLD+ + A  A
Sbjct: 324 AVMQGDLDEIVDALTA 339


>gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
 gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
          Length = 358

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 197/348 (56%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  D+ + R   L ++ ++P +  +    + LM+E+  L     A +  K  +  + D
Sbjct: 3   MFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAITD 62

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
           +  +LE+  +E+   + +E   + ++   E+E++    LL  +  D  +  +E+ AGAGG
Sbjct: 63  SEEMLEMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE R +KTE +   +    G K    ++ G   Y  +K E GV
Sbjct: 123 DESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYESGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  ++ +++ I E D RID  RASG GGQ VNTTD
Sbjct: 183 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++      E+ +++IG
Sbjct: 242 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQIG 299

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V + R  +      ++++GDLD+ + + +A
Sbjct: 300 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDSLIA 346


>gi|260220347|emb|CBA27793.1| Peptide chain release factor 1 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 329

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 146/248 (58%), Gaps = 14/248 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+  A++E+ AG GG ES  +A  L RMYTR+ + +  +TE +   + E  G K   L I
Sbjct: 67  DARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASESELGGYKEVVLRI 126

Query: 173 KGPN--------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +G          AYG LK E G HR+ R+   ++  R HTS  +I V    D++  I+I+
Sbjct: 127 EGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVLAEQDEAEAIKIN 186

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ  RSQH NKAQA  +L A++
Sbjct: 187 PSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSNKAQALKVLTARI 246

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +E +  + E  A      K+ +G G    +IR+Y   P   + D R N+        ++G
Sbjct: 247 HEKD--RSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRINLTLYKLDRAMEG 303

Query: 342 DLDDFMKA 349
           DLDD ++A
Sbjct: 304 DLDDVIEA 311


>gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
 gi|153796765|gb|EDN79185.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
          Length = 356

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RMY  +AE R+++TE + +++    G K    +I
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEVYRMYLHYAESRRWRTEMISLNENGIGGFKECVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E GVHR+ R+   +S  R HTS  ++ V P  +D +++ I E D RID 
Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAED-VDVVIDEKDIRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K+
Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +      E+ +++IG G    +IR+Y   P   V D R  +       +L+GDLD+ + +
Sbjct: 285 QSAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEVIDS 341

Query: 350 TLA 352
            +A
Sbjct: 342 LIA 344


>gi|168203426|gb|ACA21561.1| protein release factor class I [Candidatus Pelagibacter ubique]
          Length = 356

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/247 (41%), Positives = 151/247 (61%), Gaps = 7/247 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  +A +E+ AG GG E+  +A  L +MY + + K+K+  E + I   E  G+K    
Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAGDLFKMYEKVSHKKKWLVEIISISKSEAGGLKEVIA 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG N Y  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++++I++SD RI
Sbjct: 165 SIKGTNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDLKINDSDLRI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +RA G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNKA+   +LRA+LYELE  
Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDEKSQHKNKAKGMKILRARLYELERT 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + ++     +  K++IG G    +IR+Y   P   V D R N+      + L+G+  D M
Sbjct: 284 RIDQ--ERSQDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTIHKLEEFLEGEAFDEM 340

Query: 348 KATLAIK 354
             +L ++
Sbjct: 341 IESLTLQ 347


>gi|163743155|ref|ZP_02150537.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
 gi|161383572|gb|EDQ07959.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
          Length = 351

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/296 (39%), Positives = 164/296 (55%), Gaps = 16/296 (5%)

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYK-QFESLLSGEADSNDAYLEVH 122
           RL  +L   E  L + D + L E      R  L E E+  Q   L   EAD+  A LE+ 
Sbjct: 52  RLLSDLEEAEQMLADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIR 111

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+  +A  LLRMY R+AE R +  E +E    E  G+K     +KG N +  LK
Sbjct: 112 PGTGGDEAALFAGDLLRMYQRYAEARGWGIEIIEEQTTELGGLKEVVAHVKGENVFARLK 171

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS +++ V P  +D +++ I   D RIDT RASGAGGQH
Sbjct: 172 YESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDLRIDPGDLRIDTMRASGAGGQH 230

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIA 296
           VNTTDSAVRITHIPTG++V    E+SQH+N+  A  ++R +LY+LE Q+       +  +
Sbjct: 231 VNTTDSAVRITHIPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRAS 289

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +G   ++E     +IR+Y   P   + D R N+       ++ GDLD+ + A  A
Sbjct: 290 QVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTA 339


>gi|258406203|ref|YP_003198945.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
 gi|257798430|gb|ACV69367.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
          Length = 356

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/299 (39%), Positives = 173/299 (57%), Gaps = 20/299 (6%)

Query: 56  ISFIKEIQDRLCD-NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEA 112
           ++ I+E QD L D +  L ELA EE   S L+   + L        + + + LL      
Sbjct: 55  LTGIEENQDVLSDGDQELRELAKEE--LSALETRQEEL--------HARLQKLLLPKDPM 104

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +   LLRMYTR+AE   +K E +  H     G+K     I
Sbjct: 105 DDKNIILEIRAGTGGEEAALFVADLLRMYTRYAETMHWKVELMNSHPTGSGGMKEVIASI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E GVHR+ R+   +S  R HTS  ++ + P  ++ +++EI  S+ RID 
Sbjct: 165 SGASVYSRLKYESGVHRVQRVPSTESQGRIHTSAVTVAILPEAEE-VDVEIDPSELRIDY 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVRITHIP+GVVV CQ E+SQHKNKA+A  +LR+++  L+ ++ 
Sbjct: 224 FRASGPGGQSVNTTDSAVRITHIPSGVVVSCQDEKSQHKNKAKAMKVLRSRI--LKAKQE 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           E    +  S ++++G G    +IR+Y   P   + D R N+   S  +VL G++D+ ++
Sbjct: 282 EAKKELDASRRSQVGSGDRSERIRTYNF-PQGRITDHRINLTLYSLENVLAGNMDEVIE 339


>gi|160900908|ref|YP_001566490.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
 gi|238687199|sp|A9BP60|RF1_DELAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160366492|gb|ABX38105.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
          Length = 360

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 6/246 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +AYLE+ AG GG ES  +A  L RMYTR  +   +K E +  ++ E  G K   L +
Sbjct: 107 DARNAYLEIRAGTGGDESALFAGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG L+ E G HR+ R+   ++  R HTS  ++ V P  D++  I ++ +D RIDT
Sbjct: 167 EGTDVYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A+L E E  +R
Sbjct: 227 FRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSER 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K  IG G    +IR+Y   P   + D R N+       V++GDL D + A
Sbjct: 287 E--AKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTIYKLLAVMEGDLGDVLDA 343

Query: 350 TLAIKK 355
             A ++
Sbjct: 344 LQAARE 349


>gi|15616790|ref|NP_240002.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681545|ref|YP_002467930.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682101|ref|YP_002468485.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471228|ref|ZP_05635227.1| peptide chain release factor 1 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11134308|sp|P57268|RF1_BUCAI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790868|sp|B8D8X1|RF1_BUCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790869|sp|B8D775|RF1_BUCAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299668|pir||H84949 peptide chain release factor 1 [imported] - Buchnera sp.  (strain
           APS)
 gi|10038853|dbj|BAB12888.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621834|gb|ACL29990.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624388|gb|ACL30543.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311085914|gb|ADP65996.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087068|gb|ADP67148.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 361

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/236 (43%), Positives = 144/236 (61%), Gaps = 8/236 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +  ++E+ +  GG ES  +A  L RMY R+AE   +K E +   + E+ G K     I
Sbjct: 107 DKHSCFIEIRSATGGDESSIFAGELFRMYLRYAESYSWKVEIMNTSESEKGGFKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A G LK E G HR+ R+   +S  R HTS  ++ V PV   + + EI+ SD +IDT
Sbjct: 167 TGRGACGRLKFESGGHRVQRVPETESQGRIHTSTCTVAVMPVTPKTEKEEINSSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291
           +R+SGAGGQHVNTTDSA+RITHIPTG VV+CQ ERSQHKNKA+A ++L A++Y  +L+K 
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGNVVECQDERSQHKNKAKALSILSARVYAAKLEKD 286

Query: 292 REEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           R+E +++    K  +G G +    R+Y   P   + D R N+      +VL G LD
Sbjct: 287 RQESSSM---RKILLGTGERSDRNRTYNF-PQNRITDHRINLSIYKLDEVLQGKLD 338


>gi|258453172|ref|ZP_05701163.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
 gi|257859118|gb|EEV81975.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
          Length = 358

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 191/347 (55%), Gaps = 17/347 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKGKKEELAD 60

Query: 72  LLELALEEDD---CSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125
           + E+  E DD     +L+E S+ ++     LE E K    L+  +  D  D  +E+ A A
Sbjct: 61  IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKIL--LIPKDPNDDKDVIVEIRAAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E 
Sbjct: 119 GGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ 
Sbjct: 238 TDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSA 294

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +G G    +IR+Y   P   V D R  +       +++G L++ + A
Sbjct: 295 VGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340


>gi|325263710|ref|ZP_08130443.1| peptide chain release factor 1 [Clostridium sp. D5]
 gi|324030748|gb|EGB92030.1| peptide chain release factor 1 [Clostridium sp. D5]
          Length = 357

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 194/332 (58%), Gaps = 17/332 (5%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALEEDDCSIL-Q 86
           ++P +  + +  + LM+E+  L+  +   +E +     + D+L +LE   +E+   +  +
Sbjct: 20  QEPDVANDPVRFRKLMKEQSDLNPIVEAYREYKKSKQNIEDSLAMLEEESDEEMREMAKE 79

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143
           E +D+  R++   E +Q   +L    D ND     +E+ AGAGG E+  +A  + RMY  
Sbjct: 80  ELNDSKARVE---ELEQELKILLLPKDPNDDKNVIVEIRAGAGGDEAALFAAEIYRMYVH 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE R++K E + +++    G K    +I G  AY  LK E GVHR+ R+   +S  R H
Sbjct: 137 YAEGRRWKVEMISLNENGIGGFKECVFMITGQGAYSRLKYESGVHRVQRVPETESGGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ + P  ++ +++ I E D RID  RASG GGQ VNTTDSAVR+TH PTG+V+  
Sbjct: 197 TSTITVAIMPEAEE-VDVVIEEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYS 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQ +NK +A+ +LR+KL++LEL+K++  A+  E+ +++IG G    +IR+Y   P 
Sbjct: 256 QTEKSQLQNKEKAFRLLRSKLFDLELEKQQ--ASEAEARRSQIGTGDRSEKIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             V D R  +       +L+GDLD+ + + +A
Sbjct: 313 GRVTDHRIKLTLHKLDTILNGDLDEIIDSLIA 344


>gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992234|gb|EEC58238.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
          Length = 363

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 149/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ AGAGG E+  +A  L RMYT +AE R++K E +   +    G+K    ++
Sbjct: 112 DDKDIIVEIRAGAGGDEAALFAAELFRMYTHYAESRRWKVEVVNSDETGIGGMKEIEFMV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I E D RID 
Sbjct: 172 KGQGAYSVLKYESGVHRVQRVPETESGGRIHTSTATVAVMPEAEE-VDVQIDEKDIRIDV 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK 
Sbjct: 231 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKA 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +     ++ +++IG G    +IR+Y   P   V D R  +       ++DGD+ + + A
Sbjct: 291 HDAE--ADARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQEIIDA 347

Query: 350 TLA 352
            +A
Sbjct: 348 CIA 350


>gi|303256163|ref|ZP_07342179.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|331001217|ref|ZP_08324843.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
 gi|302860892|gb|EFL83967.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|329568944|gb|EGG50740.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
          Length = 360

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 185/340 (54%), Gaps = 29/340 (8%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---------IQDRLCDNL 70
           V+RL  ++   +DP +  N+ + + L +ER  ++  +   KE           + +  + 
Sbjct: 13  VRRLEEIDQNLQDPDVTSNMDQFRALSKERAEIEPVVLKAKEYEQAEEDLAAAEEMLSDE 72

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGG 127
            + E A EE     ++ T   +++I  E+E      +L    D ND    YLE+ AG GG
Sbjct: 73  EMKEFASEE-----IKATKKAIEQISSELE------ILLLPKDPNDEKNIYLEIRAGTGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  L RMY+R+AE++K++ E +     +  G K   + I G  AY  LK E G 
Sbjct: 122 DESALFAGDLFRMYSRYAERQKWQVEFVSASPSDLGGYKEIVVKIVGQGAYSKLKFESGG 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  D+  ++ I  S+ RID YRASGAGGQH+  T+
Sbjct: 182 HRVQRVPETESQGRVHTSACTVAVLPEADEIGDVVIDPSELRIDVYRASGAGGQHIQKTE 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV+CQ ERSQHKNK +A  +L ++++  ++ + +  A      K+ IG
Sbjct: 242 SAVRITHLPTGIVVECQDERSQHKNKERAMGVLISRIHAAQVAEVQ--AKESSMRKSLIG 299

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            G    +IR+Y   P   V D R N+       ++DGDLD
Sbjct: 300 SGDRSERIRTYNY-PQGRVTDHRINLTLYKLDSIMDGDLD 338


>gi|34495535|ref|NP_899750.1| peptide chain release factor 1 [Chromobacterium violaceum ATCC
           12472]
 gi|46576724|sp|Q7P1Y2|RF1_CHRVO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34101390|gb|AAQ57759.1| peptide chain release factor I [Chromobacterium violaceum ATCC
           12472]
          Length = 358

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 146/243 (60%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  LLRMYTR+AE+ +++ E +   + +  G K   + +
Sbjct: 107 DDKNIFLEIRAGTGGDEAALFAADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ V    D+  E+ ++ +D RIDT
Sbjct: 167 VGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRITHIPTG+V +CQ  RSQH NKA A  +L A++Y+++L  R
Sbjct: 227 FRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHANKASAMQVLAARIYDIQL--R 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+        K+ IG G    +IR+Y   P   + D R N+       V+DGDL +   A
Sbjct: 285 EKNQKEAAERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKLDYVMDGDLAELTDA 343

Query: 350 TLA 352
            +A
Sbjct: 344 LIA 346


>gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 358

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/289 (39%), Positives = 169/289 (58%), Gaps = 17/289 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQ 131
           E+A E+ D    Q+ ++ L+ + LE+E +Q   LL+   E DS D  +E+ AGAGG E+ 
Sbjct: 66  EMAYEDHD---FQDEAERLEGVVLELE-EQLADLLAPRDEHDSEDIIMEIKAGAGGEEAA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQG 186
            +A  L RMY R+A+K  F  E + I++ +  G+K  T+  K        A+   K E G
Sbjct: 122 LFAADLARMYERYADKSGFSWEVIGINESDLGGVKDMTITFKSKTPSRDGAWSVFKFEGG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R  TS + + VYP  D+  E+ I E D R+D YR+SG GGQ VNTT
Sbjct: 182 VHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVHIDEKDLRVDVYRSSGKGGQGVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A  GE   +++
Sbjct: 242 DSAVRLTHLPTGLVVTCQRERSQIQNKARAMQVLQARLEQMEREARE--AEAGEQRASQV 299

Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                  +IR+Y   P   + D R   +  +   VLDGD+   + A  A
Sbjct: 300 RTMDRSERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMGSLIDALQA 347


>gi|297184082|gb|ADI20201.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 360

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 146/238 (61%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  GAGG E   +A  L RMY R+ E R +K   L +++G   G K  +  +
Sbjct: 108 DDKNALVEIRQGAGGDEGAIFAGDLFRMYQRYCEGRGWKVAVLTMNEGSSGGFKEVSFEV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   +S  R HTS +S+ V P  ++ +++++   D + DT
Sbjct: 168 NGESVYGILKYESGVHRVQRVPATESQGRVHTSAASVVVLPEAEE-VDVDLDMKDVKKDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVN T+SAVR+TH+PTG+VV+CQ  RSQHKN  QA  +LR++++++E +K+
Sbjct: 227 YRSQGAGGQHVNKTESAVRLTHLPTGIVVECQDGRSQHKNYEQALKVLRSRMFDMEFKKK 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +E        KT +  G    +IR+Y   P   V D R  +   + +DV++GD+  F+
Sbjct: 287 QE--EQAAQRKTMVSTGDRSAKIRTYNY-PQGRVTDHRIGLTSYNLNDVVNGDIQKFI 341


>gi|297180646|gb|ADI16856.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_13E22]
          Length = 359

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LEV AG GG E+  +A+ L  MY R+A K  ++ E +E+ +    G K AT  I
Sbjct: 108 DSRNAILEVRAGTGGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   ++  R HTS +++ V P  +D ++I++ +SD RID 
Sbjct: 168 AGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIDVQDSDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + 
Sbjct: 227 FRASGPGGQSVNTTDSAVRITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARL 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           +  A    S K ++G G    +IR+Y   P   V D R N+       V+ G+ LD+ ++
Sbjct: 287 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVE 343

Query: 349 ATLA 352
           A +A
Sbjct: 344 ALVA 347


>gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
 gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
          Length = 360

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + ++E+ AG GG ES  +A  LLRMYTR+AE+++++ E +     +  G K     +
Sbjct: 107 DHRNIFVEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   ++  R HTS  ++ + P  D   +I+I+ +D RIDT
Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N T+SAVRITH+PTG+VV+CQ +RSQH+NK +A  +L A+L   + Q+R
Sbjct: 227 FRASGAGGQHINKTESAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ IG G    +IR+Y   P   V D R N+       ++DGD+D+ + A
Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGA 343

Query: 350 TLA 352
             A
Sbjct: 344 LAA 346


>gi|110003948|emb|CAK98288.1| peptide chain release factor 1 protein [Spiroplasma citri]
          Length = 358

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 190/345 (55%), Gaps = 23/345 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE- 78
           ++R + +N +   P +  +V +   L +E+  L+  ++     ++ + +N+   +L LE 
Sbjct: 13  LKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKN-VLNNINEAKLILET 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWA 134
           E D  +++   + L+  ++  E    E  ++    D ND      E+   AGG E   +A
Sbjct: 72  EKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGGDEGNIFA 131

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++AE++ +K E +E ++ E  G  + + ++KG   Y  +K E G HR+ RI 
Sbjct: 132 GDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGAHRVQRIP 191

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P +++ ++ EI  +D +IDTYRASGAGGQHVNTTDSAVRITH
Sbjct: 192 KTESKGRVHTSTATVAVLPEIEE-VDFEIKTADLKIDTYRASGAGGQHVNTTDSAVRITH 250

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK--------REEIANIGESSKTEI 306
           +PTG VV  Q  RSQH NKA A   LR+KLYE + +K        R++    G+ S+   
Sbjct: 251 LPTGFVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERWTLRKDAVGTGDRSE--- 307

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R N+       +++G+LD+ + A +
Sbjct: 308 ----KIRTYNY-PQNRVTDHRINLTLQKLDQIMEGNLDEIVVALI 347


>gi|221068955|ref|ZP_03545060.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|299531475|ref|ZP_07044881.1| peptide chain release factor 1 [Comamonas testosteroni S44]
 gi|220713978|gb|EED69346.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|298720438|gb|EFI61389.1| peptide chain release factor 1 [Comamonas testosteroni S44]
          Length = 359

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/259 (41%), Positives = 153/259 (59%), Gaps = 9/259 (3%)

Query: 95  IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           IKLE E ++   LL  + D +  A++E+ AG GG ES  +A  L RMYTR+A    +K E
Sbjct: 90  IKLEDELQRL--LLPKDPDDARPAFVEIRAGTGGDESALFAGDLTRMYTRYAANVGWKVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +   + E  G K   L I+G N YG L+ E G HR+ R+   ++  R HTS  ++ V P
Sbjct: 148 VMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NK
Sbjct: 208 EPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           A+A  +L+A++ E E  + E  A      K  IG G    +IR+Y   P   + D R N+
Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINL 324

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                  V++GDL D ++A
Sbjct: 325 TLYKLLAVMEGDLGDVIQA 343


>gi|49484342|ref|YP_041566.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82751719|ref|YP_417460.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257426257|ref|ZP_05602672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428915|ref|ZP_05605309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431524|ref|ZP_05607897.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257434233|ref|ZP_05610583.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257437146|ref|ZP_05613186.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282904787|ref|ZP_06312661.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906462|ref|ZP_06314313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909431|ref|ZP_06317246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911683|ref|ZP_06319482.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914967|ref|ZP_06322747.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917467|ref|ZP_06325220.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920296|ref|ZP_06328020.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282925507|ref|ZP_06333161.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283771286|ref|ZP_06344175.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958898|ref|ZP_06376343.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293509035|ref|ZP_06667822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510950|ref|ZP_06669649.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547552|ref|ZP_06672227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295428705|ref|ZP_06821331.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297589815|ref|ZP_06948455.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|56749405|sp|Q6GEV7|RF1_STAAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361615|sp|Q2YUN5|RF1_STAAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49242471|emb|CAG41187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82657250|emb|CAI81691.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257270962|gb|EEV03135.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274257|gb|EEV05774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277765|gb|EEV08435.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257280872|gb|EEV11017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283539|gb|EEV13666.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282312908|gb|EFB43309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316156|gb|EFB46537.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318669|gb|EFB49026.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321170|gb|EFB51501.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324448|gb|EFB54761.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326701|gb|EFB56999.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330412|gb|EFB59930.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282594820|gb|EFB99797.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|283459491|gb|EFC06584.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283789616|gb|EFC28439.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919672|gb|EFD96745.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094739|gb|EFE25011.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466235|gb|EFF08762.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|295127375|gb|EFG57015.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576943|gb|EFH95657.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695392|gb|ADI98614.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302333764|gb|ADL23957.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|312437464|gb|ADQ76535.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315193283|gb|EFU23681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|323439333|gb|EGA97057.1| peptide chain release factor 1 [Staphylococcus aureus O11]
 gi|323442458|gb|EGB00087.1| peptide chain release factor 1 [Staphylococcus aureus O46]
          Length = 358

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 191/347 (55%), Gaps = 17/347 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125
              +L    ++++  +L+E S  ++     LE E K    L+  +  D  D  +E+ A A
Sbjct: 61  IEEMLSETDDKEEVEMLKEESSGIKAELPNLEEELKIL--LIPKDPNDDKDVIVEIRAAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E 
Sbjct: 119 GGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ 
Sbjct: 238 TDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSA 294

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +G G    +IR+Y   P   V D R  +       +++G L++ + A
Sbjct: 295 VGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340


>gi|225386765|ref|ZP_03756529.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
 gi|225047127|gb|EEG57373.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
          Length = 358

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/332 (36%), Positives = 194/332 (58%), Gaps = 19/332 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-QE 87
           DP + Q+      LM+E+  L     A    K+ +  + D+L +LE   +E+   +  +E
Sbjct: 21  DPDVTQDTKRFTKLMKEQADLAPIVEAYKQYKQAKQDVEDSLAMLEEESDEEMREMAKEE 80

Query: 88  TSDNLQRIK-LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143
            +D  +RI+ LE E K    +L    D ND     LE+ AGAGG E+  +A  L RMYT 
Sbjct: 81  LADAKKRIEDLEHELK----ILLLPKDPNDDKNIILEIRAGAGGDEAALFAAELYRMYTN 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +A+ +++K E + +++    G K    ++ G  AY  LK E GVHR+ R+   +S  R H
Sbjct: 137 YADSQRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGVHRVQRVPETESGGRIH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++ ++++I  +DCRID  RASG GGQ VNTTDSAVR+TH+PTG+V+  
Sbjct: 197 TSTATVAVMPEAEE-VDVQIDMNDCRIDVMRASGNGGQCVNTTDSAVRLTHMPTGIVIYS 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQ +NK +A+ +LR+KL+++EL+KR+  ++  E  +++IG G    +IR+Y   P 
Sbjct: 256 QTEKSQLQNKEKAFRLLRSKLFDIELEKRQ--SSEAEERRSQIGTGDRSEKIRTYNF-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             V D R  +       +++GD+ + +   +A
Sbjct: 313 GRVTDHRIKLTLYKIDSIMNGDIQELLDNLIA 344


>gi|307823419|ref|ZP_07653648.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
 gi|307735404|gb|EFO06252.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
          Length = 361

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 94/243 (38%), Positives = 150/243 (61%), Gaps = 6/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ + ++E+ AG GG E+  ++  L RMY R+AE++ ++TE +    G+  G K   L +
Sbjct: 109 DNRNIFIEIRAGTGGDEAAIFSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS  ++ + P VD+   I+I+ +D ++DT
Sbjct: 169 AGKDVYSQLKFESGAHRVQRVPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N T+SA+RITH+PTGVVV+CQ ERSQHKN+A+A ++L ++L   E +K 
Sbjct: 229 FRASGAGGQHINKTESAIRITHVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKH 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A    + K ++G G    +IR+Y   P   + D R N+      D++ G L+  ++ 
Sbjct: 289 H--AEQSATRKLQVGSGDRSERIRTYNY-PQGRLTDHRINLTLYKLDDIMQGGLEQVIQP 345

Query: 350 TLA 352
            ++
Sbjct: 346 LIS 348


>gi|319936941|ref|ZP_08011351.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
 gi|319807877|gb|EFW04456.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
          Length = 358

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 145/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +EV   AGG E   +A  L RMY ++AE + +K E +E  + E  G    + ++
Sbjct: 108 DNKNVIVEVRGAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMETQESEAGGFSLVSFMV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   ++  R HTS +++ V P  ++ +++EI+  D RIDT
Sbjct: 168 KGEGVYSKLKFESGSHRVQRVPKTETQGRVHTSTATVLVMPEAEE-VDVEINPGDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N TDSAVRITH+PTG+V   Q  RSQH NK +A   LRA++YE+  +++
Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGIVASSQDGRSQHDNKDKAMRALRARVYEMVQREQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE   +G   +++IG G    +IR+Y   P   V D R  +       +++G LDD + A
Sbjct: 287 EEA--LGSERRSKIGSGDRSEKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLDDVIDA 343

Query: 350 TL 351
            +
Sbjct: 344 LI 345


>gi|260779385|ref|ZP_05888277.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605549|gb|EEX31844.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 362

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 184/322 (57%), Gaps = 17/322 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  +       
Sbjct: 25  DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMAKEDDAEMREMAQEE 83

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++E  + ++R+  E+   Q   L     D  + +LE+ AGAGG E+  +A  L RMY+++
Sbjct: 84  IKEAQETIERLNDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKF 140

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HT
Sbjct: 141 AEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ +   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ
Sbjct: 201 SACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
            ERSQHKNKA+A ++L A++  ++ ++ +  A   ++ +  +G G    +IR+Y   P  
Sbjct: 261 DERSQHKNKAKAMSVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQG 317

Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343
            V D R N+     ++V++GDL
Sbjct: 318 RVSDHRINLTIYRLNEVMEGDL 339


>gi|254461785|ref|ZP_05075201.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2083]
 gi|206678374|gb|EDZ42861.1| peptide chain release factor 1 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 351

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 150/245 (61%), Gaps = 8/245 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD+  A +E+  G GG E+  +A  LLRMY R++E R +K E +E    E  GIK  T 
Sbjct: 100 EADARPAMIEIRPGTGGDEAALFAADLLRMYQRYSEARGWKFEIIEEQLTELGGIKEVTG 159

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG N +  LK E GVHR+ R+   +S  R HTS +++ V P   + +++ I+ +D RI
Sbjct: 160 HIKGENVFARLKYESGVHRVQRVPTTESGGRIHTSAATVAVLPEAQE-VDLVIAANDIRI 218

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRITHIPTG++V    E+SQH+N+  A  +LR +LY+ E Q
Sbjct: 219 DTMRASGAGGQHVNTTDSAVRITHIPTGIIV-VSAEKSQHRNREIAMQVLRTRLYDAERQ 277

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + +E        K+++G G    +IR+Y   P   + D R N+       V++GDLD+ +
Sbjct: 278 RIDE--ERSADRKSQVGSGDRSERIRTYNF-PQGRMSDHRINLTLYKLDQVMEGDLDEII 334

Query: 348 KATLA 352
            A  A
Sbjct: 335 DALTA 339


>gi|260879267|ref|ZP_05891622.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
 gi|308089661|gb|EFO39356.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
          Length = 325

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 168/291 (57%), Gaps = 10/291 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  D+L   E   +EDD  + +   + 
Sbjct: 25  DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEEMAKEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           SQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G    +IR+Y
Sbjct: 264 SQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTY 312


>gi|306820801|ref|ZP_07454426.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551191|gb|EFM39157.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 357

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/362 (34%), Positives = 193/362 (53%), Gaps = 40/362 (11%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------------DNAISF 58
           +F+   AV ++ S L  K  DP +  N  + + LM+E   L             ++ I  
Sbjct: 1   MFENLGAVKEKFSELEKKISDPEIINNQEQWQKLMKEHADLSPVVKKYEEYLKANDDIKG 60

Query: 59  IKEI----QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
            KEI     D    +L   EL+ LEED   I+ E      +I L         L     D
Sbjct: 61  AKEIIANESDEDLRDLAKEELSGLEEDLTKIIDEL-----KILL---------LPKDPND 106

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             +  +E+  GAGG E+  +A +L RMY+ +A  R++K E +  ++ E  G K    +I 
Sbjct: 107 DKNVIVEIRGGAGGDEAALFAGVLFRMYSMYAANRRWKVELMSSNETEIGGYKEVVFMIT 166

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  AY  LK E GVHR+ R+   +S  R HTS  ++ V P  +D +E+ +  +D R+D +
Sbjct: 167 GKGAYSRLKFESGVHRVQRVPETESQGRIHTSTVTVAVLPEAED-VEVNLDLNDVRVDVF 225

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+THIPTG+V+  Q E+SQ KNK +A+ +L+AKLY++EL+K++
Sbjct: 226 RSSGNGGQSVNTTDSAVRLTHIPTGIVISMQDEKSQLKNKDKAFKILKAKLYDMELEKKQ 285

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +   +    K+++G G    +IR+Y   P   V + R  +        L+GDLD+ + A 
Sbjct: 286 K--EMASQRKSQVGTGDRAERIRTYNY-PQGRVSEHRIGLNLYKLESFLNGDLDEIIDAL 342

Query: 351 LA 352
           + 
Sbjct: 343 IT 344


>gi|264676913|ref|YP_003276819.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
 gi|262207425|gb|ACY31523.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
          Length = 359

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/259 (41%), Positives = 153/259 (59%), Gaps = 9/259 (3%)

Query: 95  IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           IKLE E ++   LL  + D +  A++E+ AG GG ES  +A  L RMYTR+A    +K E
Sbjct: 90  IKLEDELQRL--LLPKDPDDARPAFVEIRAGTGGDESALFAGDLTRMYTRYAANVGWKVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +   + E  G K   L I+G N YG L+ E G HR+ R+   ++  R HTS  ++ V P
Sbjct: 148 VMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NK
Sbjct: 208 EPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           A+A  +L+A++ E E  + E  A      K  IG G    +IR+Y   P   + D R N+
Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINL 324

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                  V++GDL D ++A
Sbjct: 325 TLYKLLAVMEGDLGDVIQA 343


>gi|258422882|ref|ZP_05685782.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
 gi|257846906|gb|EEV70920.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
          Length = 358

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 191/346 (55%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +      K  ++ L D
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +L    ++++  +L+E S  ++     +E ++ + LL      D  D  +E+ A AG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESSGIKAELPNIE-EELKILLIPKDPNDDKDVIVEIRAAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ +
Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +       +++G L++ + A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340


>gi|260427219|ref|ZP_05781198.1| peptide chain release factor 1 [Citreicella sp. SE45]
 gi|260421711|gb|EEX14962.1| peptide chain release factor 1 [Citreicella sp. SE45]
          Length = 349

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 175/316 (55%), Gaps = 17/316 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-- 102
           L RE   L   +  I E  +RL  +L   E  L + +   L E      R +L    K  
Sbjct: 31  LGREYAELKPVVDQIAE-WNRLQADLTEAEEMLADPEMKALAEEELPALRARLPEAEKAL 89

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    AD+  A LE+  G GG E+  +A  L RMY R++E R ++ E +E  D E 
Sbjct: 90  QLALLPRDAADARPAILEIRPGTGGEEAALFAGDLARMYQRYSEARGWRWEVIEEQDTEL 149

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K   + I+G N +  LK E GVHR+ R+   +S  R HTS +++ V P   ++++I+
Sbjct: 150 GGLKELVVRIEGENVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEA-EAVDID 208

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+  D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A N+LRA
Sbjct: 209 IASGDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMNVLRA 267

Query: 283 KLYELELQKREEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LY++E QK ++       A +G   ++E     +IR+Y   P   + D R  +      
Sbjct: 268 RLYDMERQKADDARASDRRAQVGSGDRSE-----RIRTYNF-PQGRMTDHRIGLTLYRLE 321

Query: 337 DVLDGDLDDFMKATLA 352
            +L GDLD+ + A  A
Sbjct: 322 AILSGDLDEIVDALTA 337


>gi|330837036|ref|YP_004411677.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
 gi|329748939|gb|AEC02295.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
          Length = 354

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 194/347 (55%), Gaps = 17/347 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDN 69
           L   D+  + L+ L+ K   P   +++   K LM+ER HL   +     +K +  +L ++
Sbjct: 2   LEKLDSFEKELAGLDMKISSPDTMKDMNLFKSLMQERSHLVPIVEELQHLKHVSSQLEES 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGA 125
           L LL+    E D  +++ T + ++ +K EVE     +    +        +  +E+ AG 
Sbjct: 62  LALLK---SETDPDMIEMTKEEIEGLKAEVEASTSRTKVLLIPPDPLSGKNIIMEIRAGT 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMYT +AE + +K E L +++    GIK     I G + YG L+ E 
Sbjct: 119 GGEEAALFAADLYRMYTHYAEAKNWKIEILTLNETGLGGIKEVVCSISGKDVYGSLRWES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS  ++ V P  +++ +IEI   D ++D  R+ G GGQ VNT
Sbjct: 179 GVHRVQRVPETEAGGRIHTSACTVAVLPEAEET-DIEIRPEDLKVDVMRSGGPGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH+PTG+VV CQ E+SQ KNKA+A  +LR++LY++E +K+ +     ++ + +
Sbjct: 238 TDSAVRMTHLPTGIVVICQDEKSQIKNKAKALRVLRSRLYDMEEEKKAK--ERADARRDQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +G G    +IR+Y   P   + D R N+       +++G L++  +A
Sbjct: 296 VGSGDRSERIRTYNF-PQNRLTDHRINLTLYKLDLIMNGQLEEVTEA 341


>gi|126739408|ref|ZP_01755101.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
 gi|126719508|gb|EBA16217.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
          Length = 351

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 174/307 (56%), Gaps = 16/307 (5%)

Query: 57  SFIKEIQDRLCDNLILL------ELALEEDDCSIL-QETSDNLQRIKLEVEYK-QFESLL 108
           S IK + +++C    LL      E+ L + D   L +E    L+    + E+  Q   L 
Sbjct: 38  SEIKPVAEQICAYRQLLADLEEAEVMLADPDMKELAEEEIPTLKAALPDAEHALQLALLP 97

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
              AD+  A LE+  G GG E+  +A  LLRMY R+AE R +K E +E    E  GIK  
Sbjct: 98  KDAADTRPAMLEIRPGTGGDEASLFAGDLLRMYQRYAEARGWKFEVIEEQATELGGIKEV 157

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
            + IKG N +  +K E GVHR+ R+   +S  R HTS +++ V P  +D ++I I  +D 
Sbjct: 158 VVHIKGENVFARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDIHIDANDL 216

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+ +LY+LE
Sbjct: 217 RIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTRLYDLE 275

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            Q+ +   +   +S+  +G G    +IR+Y   P   + D R N+       ++ GDLD+
Sbjct: 276 RQRIDSERSADRASQ--VGSGDRSERIRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDE 332

Query: 346 FMKATLA 352
            + A  A
Sbjct: 333 IIDALTA 339


>gi|323463876|gb|ADX76029.1| peptide chain release factor 1 [Staphylococcus pseudintermedius
           ED99]
          Length = 358

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 185/345 (53%), Gaps = 13/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D   +R   LN    DP +  +    +   +E+  L   +      K++++   +
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++L    E D+  +L+E +  L+  +    E  +   +     D  D  +E+   AGG
Sbjct: 61  IELMLAETDEADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE  +FK E +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    +IR+Y   P   V D R  +       +++G LD+ + A
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDA 340


>gi|304321558|ref|YP_003855201.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
 gi|303300460|gb|ADM10059.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
          Length = 360

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 175/321 (54%), Gaps = 23/321 (7%)

Query: 36  WQNVIEAKMLMRE-RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
            + V EA +L+ + RQ L +A    K     +       E+A EE     +   +  ++R
Sbjct: 40  LKPVAEAALLLTDARQGLLDAEGLTKSTDPEMA------EMAKEE-----IASLTGQIER 88

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   Q   L   +AD     LEV AG GG E+  +A  L RMY R+A  R ++ E 
Sbjct: 89  LEADL---QLMLLPKDKADQAPVILEVRAGTGGDEAALFAGDLFRMYQRYAATRGWRVEI 145

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L   +    G K     + G N +G LK E GVHR+ R+   ++  R HTS +++ V P 
Sbjct: 146 LSATESGVGGYKEIQANVSGDNVFGRLKFESGVHRVQRVPETETQGRIHTSAATVAVLPE 205

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +D I+I+I ESD RID +RASG GGQ VNTTDSAVRITHIPTGVVV  Q E+SQHKN+A
Sbjct: 206 PED-IDIDIQESDLRIDVFRASGPGGQSVNTTDSAVRITHIPTGVVVSQQDEKSQHKNRA 264

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +LRA+LYE E  +    A      K ++G G    +IR+Y   P   V D R N+ 
Sbjct: 265 KAMKVLRARLYEAE--RSRVAAERAAERKGQVGSGDRSERIRTYNF-PQGRVTDHRINLT 321

Query: 332 KTSPSDVLDGD-LDDFMKATL 351
                 V+ G+ +DD + A +
Sbjct: 322 LYKLDKVIAGEAVDDLIDALI 342


>gi|304394129|ref|ZP_07376052.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
 gi|303293569|gb|EFL87946.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
          Length = 358

 Score =  186 bits (471), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 174/316 (55%), Gaps = 14/316 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYKQ 103
           L +E   LD  +  I E+Q    +   L  +  + D D  + +     ++ +K  +E  +
Sbjct: 33  LAKEYAELDPVVIKIGEMQAAQSEFADLAGMLADGDTDAEMKEMAQAEMEPLKAAIEEHE 92

Query: 104 FES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
            E     L   EAD+ +A LE+ AG GG+E+  +A  L RMY R AE   +K + L    
Sbjct: 93  AELQILLLPRDEADAKNAILEIRAGTGGSEAALFAGDLFRMYQRHAETSGWKVDVLSESA 152

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GE  G K     I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D +
Sbjct: 153 GEVGGYKEIIASINGTGVFARLKFESGVHRVQRVPETESGGRVHTSAATVAVLPEAED-V 211

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +IEI   D RIDT RASGAGGQHVNTTDSAVRITHIPTGVVV    E+SQH+N+A A   
Sbjct: 212 DIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGVVV-LSTEKSQHQNRANAMKE 270

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           LR +LY++E QK ++     +S K ++G G    +IR+Y   P   V D R N+      
Sbjct: 271 LRTRLYDMERQKVDQ--ERADSRKGQVGSGDRSERIRTYNF-PQGRVSDHRINLTLYKLD 327

Query: 337 DVLDGD-LDDFMKATL 351
            ++ G+ LD+ + A +
Sbjct: 328 KMIAGEGLDEMLDALI 343


>gi|325660746|ref|ZP_08149374.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472820|gb|EGC76030.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 356

 Score =  186 bits (471), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 199/348 (57%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L     A +  K+ +  + D
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
           +  +LE+  +E+   + +E   + ++   E+E++    LL  +  D  +  +E+ AGAGG
Sbjct: 61  SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE +++KTE + +++    G K    ++ G   Y  +K E GV
Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  ++ +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++      E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIA 344


>gi|327481907|gb|AEA85217.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166]
          Length = 360

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 151/245 (61%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY+R+AEK+ ++ E L   +GE  G K     +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V P  D+   +EI+ +D RIDT
Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A   L AK     LQ R
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALAWLAAK-----LQDR 283

Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++ A    I E+ K  +G G    +IR+Y   P   V D R N+   S ++V+ G ++  
Sbjct: 284 QDAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQV 342

Query: 347 MKATL 351
           ++  L
Sbjct: 343 IEPLL 347


>gi|307544472|ref|YP_003896951.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
 gi|307216496|emb|CBV41766.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
          Length = 363

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 13/243 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ + +LE+ AG GG E+  +A  L RMY+R+AE   +K E +    G++ G K     +
Sbjct: 109 DAGNVFLEIRAGTGGDEAALFAGDLFRMYSRYAELHGWKVEIVSASHGDQGGYKELISRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ V P   +  EI+I  ++ R+DT
Sbjct: 169 KGEGVYARLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEAAEVGEIDIDPNELRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL----- 287
           +RASGAGGQHVNTTDSA+RITH+P+GVVV+CQ+ERSQHKN+A+A ++L A+L +      
Sbjct: 229 FRASGAGGQHVNTTDSAIRITHLPSGVVVECQEERSQHKNRAKAMSLLAARLKQAAQDSQ 288

Query: 288 -ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345
            + Q  E  + +G   ++E     +IR+Y   P   V D R N+     SDV+ G+ LD+
Sbjct: 289 RQQQADERRSLVGSGDRSE-----RIRTYNF-PQGRVTDHRINLTLYKLSDVVGGEGLDE 342

Query: 346 FMK 348
            ++
Sbjct: 343 VIE 345


>gi|319893069|ref|YP_004149944.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162765|gb|ADV06308.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 358

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 187/346 (54%), Gaps = 15/346 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +    +   +E+  L   +   ++ + ++ ++  
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYK-QVKEDAE 59

Query: 72  LLELALEE----DDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +EL L E    D+  +L+E +  L+  +    E  +   +     D  D  +E+   AG
Sbjct: 60  EIELMLAETDDADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+++AE  +FK E +E  + +  G K  +  + G  AY  LK E G
Sbjct: 120 GDEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDTYR+SGAGGQHVNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +
Sbjct: 239 DSAVRITHIPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P   V D R  +       +++G LD+ + A
Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDA 340


>gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 357

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/247 (41%), Positives = 152/247 (61%), Gaps = 7/247 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  +A +E+ AG GG E+  +A+ L +MY + + K+K+  E + I   +  G+K    
Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFASDLFKMYEKVSHKKKWALELISISRSDAGGLKEVIA 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG N Y  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++++I+E+D RI
Sbjct: 165 SIKGTNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDLKINEADLRI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +RA G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNKA+   +LR++LYELE  
Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLTVSQQDEKSQHKNKAKGMKILRSRLYELERS 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + ++     +  KT+IG G    +IR+Y   P   V D R N+      + L+G+  D M
Sbjct: 284 RIDQ--ERSQDRKTKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHRLEEFLEGEAFDEM 340

Query: 348 KATLAIK 354
             +L ++
Sbjct: 341 IESLTLQ 347


>gi|332558342|ref|ZP_08412664.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
 gi|332276054|gb|EGJ21369.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
          Length = 351

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+  G GG E+  +A  LLRMY R+AE + ++ E L++   E  GI+ AT  
Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  A+  LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++EI  +D RID
Sbjct: 161 IEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADIRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+
Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +  +     K ++G G    +IR+Y   P   + D R N+   +   ++ GDL + + 
Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335

Query: 349 ATLA 352
           A  A
Sbjct: 336 ALTA 339


>gi|296775701|gb|ADH42977.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_38M03]
          Length = 358

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 150/251 (59%), Gaps = 7/251 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E D  +A +E+ AG GG E+  +   L +MY +   K+K+  E + I   E  G K
Sbjct: 101 LPKDEDDDKNAIVEIRAGTGGLEASLFCADLFKMYEKVCSKKKWNLEIINISKSEAGGFK 160

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
                + G + Y +LK E GVHR+ RI   ++  R HTS +++ V P V++ ++IEI ES
Sbjct: 161 EVIFSVNGNDIYSYLKYESGVHRVQRIPETETQGRVHTSAATVAVLPEVEE-VDIEIKES 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+D +RA G GGQ VNTTDSAVRITHIP+GVVV  Q E+SQHKNKA+A  +LR+++YE
Sbjct: 220 DLRVDVFRAGGPGGQSVNTTDSAVRITHIPSGVVVSQQDEKSQHKNKAKALKILRSRVYE 279

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            E +K+++      + +++IG G    +IR+Y   P   V D R N+      + L GD+
Sbjct: 280 AEKRKKDQ--ERSSNRRSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLEEFLSGDI 336

Query: 344 DDFMKATLAIK 354
            + M   L ++
Sbjct: 337 HEEMNQELRLQ 347


>gi|300716406|ref|YP_003741209.1| peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
 gi|299062242|emb|CAX59359.1| Peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
          Length = 360

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 141/240 (58%), Gaps = 16/240 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  +A  L RMY+R+AE R++K E +  +DGE  G K     +
Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWKIEIMSTNDGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ + P + ++   EI+  D +IDT
Sbjct: 167 IGDGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAIMPELPEAEMPEINAGDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML--------RAKL 284
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L         A+L
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAETARL 286

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++ E   R  +   G+ S          R+Y   P   + D R N+      + + G LD
Sbjct: 287 HQEEASTRRNLLGTGDRSDRN-------RTYNY-PQGRITDHRINLTLYRLDEAMQGKLD 338


>gi|326386588|ref|ZP_08208210.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208903|gb|EGD59698.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 356

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/274 (39%), Positives = 157/274 (57%), Gaps = 13/274 (4%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           AL+E D  +     + + RI+ E+   +       L    ADS+ A LE+ AG GG E+ 
Sbjct: 64  ALDEPDADMRALAEEEMARIRAELPEAERRLALAMLPRDNADSHPAMLEIRAGTGGDEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E +  +  +  G K     + G   +  LK E GVHR+ 
Sbjct: 124 LFAADLFRMYERYAAEQGWKVEVISANASDIGGFKEVIAHVAGQGVFAKLKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P  D+ +++ I + D +ID YRASGAGGQHVNTTDSAVR
Sbjct: 184 RVPVTESGGRIHTSAATVAVLPEPDE-VDVSIDDKDLKIDIYRASGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWG- 309
           ITH+PTG+VV  Q ERSQHKNKA+A  +LR +LY+L   +RE+      E+ +  +G G 
Sbjct: 243 ITHLPTGIVVTQQDERSQHKNKAKAMQVLRTRLYDL---RREQAQGAEAEARRAMVGSGD 299

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              +IR+Y   P   V D R N+      ++L G
Sbjct: 300 RSERIRTYNF-PQGRVTDHRINLTLHRLPEILAG 332


>gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950208|gb|AEA23905.1| Peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 366

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/332 (38%), Positives = 182/332 (54%), Gaps = 12/332 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +   A+ L R    +   ++  KE+     D     ELA   DD +   E  D 
Sbjct: 28  DPAVHADPARARRLGRRYAEIGPVVAVAKELASVRDDLAAARELA--ADDPTFGAEADDL 85

Query: 92  LQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             R+   +E +  E L+  +  D++D  LEV +G GG ES  +A  L+RMYTR+AE R +
Sbjct: 86  AARVP-ALEARLAELLVPRDPHDADDVVLEVKSGEGGEESALFAGDLVRMYTRFAESRGW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKG--PNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTS 205
            TE L+    +  G K  TL ++   P A G W  LK E GVHR+ R+   +S  R HTS
Sbjct: 145 STEILDATTSDLGGYKDVTLSVRARVPAADGVWSALKFEGGVHRVQRVPVTESQGRIHTS 204

Query: 206 FSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
            + + VYP    D   IEI ++D R+D +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ
Sbjct: 205 AAGVLVYPDTGADDAGIEIDDNDLRVDVFRSSGHGGQSVNTTDSAVRITHLPTGIVVSCQ 264

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMV 323
            ERSQ +N+A+A  +LR++L  L  ++    A+    S+   +    +IR+Y   P   +
Sbjct: 265 NERSQLQNRARAMEVLRSRLQALAEEEAAARASDARRSQVRTVDRSERIRTYNF-PENRI 323

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            D R   +  + S VLDGDL D + A +A  +
Sbjct: 324 ADHRVGYKAHNLSAVLDGDLGDVIAALVAADR 355


>gi|331085530|ref|ZP_08334614.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407417|gb|EGG86919.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 358

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 199/348 (57%), Gaps = 12/348 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L     A +  K+ +  + D
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
           +  +LE+  +E+   + +E   + ++   E+E++    LL  +  D  +  +E+ AGAGG
Sbjct: 61  SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE +++KTE + +++    G K    ++ G   Y  +K E GV
Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  ++ +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++      E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIA 344


>gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0770_37D02]
          Length = 358

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 147/238 (61%), Gaps = 7/238 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   EAD+ +A LE+ AG GG E+  +   L +MY +   K+K+  E + I   E  G K
Sbjct: 101 LPKDEADAKNAILEIRAGTGGLEATLFVADLYKMYEKVCLKKKWLLEIINISKSEAGGFK 160

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              LLIKG N Y +LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++I+I+E 
Sbjct: 161 EVILLIKGNNIYSFLKFESGVHRVQRVPKTETQGRVHTSAATVAVLPEAEE-VDIKINEK 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID +R+SG GGQ VNTTDSAVRITH+P+GVVV  Q E+SQHKN+A+A  +LR+++YE
Sbjct: 220 DLRIDVFRSSGPGGQSVNTTDSAVRITHLPSGVVVSQQDEKSQHKNRAKAMKILRSRVYE 279

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            E +K+++        K +IG G    +IR+Y   P   V D R N+      + L+G
Sbjct: 280 NEREKKDK--ERSRDRKNQIGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLEEFLNG 334


>gi|156389000|ref|XP_001634780.1| predicted protein [Nematostella vectensis]
 gi|156221867|gb|EDO42717.1| predicted protein [Nematostella vectensis]
          Length = 273

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/244 (43%), Positives = 153/244 (62%), Gaps = 9/244 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD NDA LEV AG GG E+  +A+ +  MY R+A  +K+K + L+I   +  G K A+ 
Sbjct: 10  EADENDAILEVRAGTGGQEASLFASEMFIMYQRFAAFKKWKFDILDIARSDTGGYKEASA 69

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +G +K E GVHR+ R+   ++  R HTS  ++ V P   + +++ IS +D +I
Sbjct: 70  SISGYGVFGKMKFEVGVHRVQRVPVTEAQGRVHTSTMTVAVLPQPQE-VDVIISPNDLKI 128

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT+RASGAGGQHVNTTDSAVRITHIP+G+VV  Q+ERSQ KNKA+A  +LRA+LY  +LQ
Sbjct: 129 DTFRASGAGGQHVNTTDSAVRITHIPSGMVVSSQEERSQFKNKAKAMQVLRARLY--DLQ 186

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
           ++E  +    + +T+IG      +IR+Y   P   V D R  +   +    L+G   L+D
Sbjct: 187 RQEADSARVHARRTQIGTAERSEKIRTYNF-PQGRVTDHRIGMTSHTVDKFLEGGVLLED 245

Query: 346 FMKA 349
            + A
Sbjct: 246 MIDA 249


>gi|254419936|ref|ZP_05033660.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
 gi|196186113|gb|EDX81089.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
          Length = 355

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 106/246 (43%), Positives = 151/246 (61%), Gaps = 9/246 (3%)

Query: 111 EADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           +AD N  A LEV AG GG E+  +A  L RMY+R+A  R ++ E     +G+  G K   
Sbjct: 100 DADENASAVLEVRAGTGGDEAALFAGDLFRMYSRYAATRGWRIELDSATEGDAGGYKEII 159

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             + G   +G LK E GVHR+ R+   ++  R HTS +++ V P V+D +EIEI E D R
Sbjct: 160 ATVTGDGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEVED-VEIEILEKDIR 218

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT+RASG+GGQHVN TDSAVRITH+PTG+V     E+SQH N+ +A   LR +LY+++ 
Sbjct: 219 IDTFRASGSGGQHVNKTDSAVRITHLPTGIVA-TSSEKSQHVNRDKAMKNLRVRLYDMQR 277

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           Q + ++A   +S K+++G G    +IR+Y   P   V D R  +   S   +L+GDLD  
Sbjct: 278 QAK-DLAR-ADSRKSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPM 334

Query: 347 MKATLA 352
           + A +A
Sbjct: 335 LNALIA 340


>gi|291320737|ref|YP_003516002.1| peptide chain release factor 1 [Mycoplasma agalactiae]
 gi|290753073|emb|CBH41049.1| Peptide chain release factor 1 [Mycoplasma agalactiae]
          Length = 358

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 145/249 (58%), Gaps = 16/249 (6%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +  +E+   AGG E+  +A  L RMY+++A++  F+ + L  +     G      
Sbjct: 107 ENDDKNIIVEIRGAAGGDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVF 166

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG  AY   K E GVHR+ R+   +S  R HTS +++ V P +DDS+EIEI  SD +I
Sbjct: 167 SIKGEKAYSKFKFESGVHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKI 226

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +R+SGAGGQ VNTTDSAVRITH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+Q
Sbjct: 227 DVFRSSGAGGQSVNTTDSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQ 286

Query: 291 KREE-------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           K+ E       +A  G+ S+       +IR+Y   P   V D R +   TS   +++G L
Sbjct: 287 KKAEEESGYRKLAGHGDRSE-------KIRTYNY-PQDRVTDHRISF-STSLKPIMEGKL 337

Query: 344 DDFMKATLA 352
              + A LA
Sbjct: 338 TPIIDALLA 346


>gi|51246578|ref|YP_066462.1| peptide chain release factor 1 [Desulfotalea psychrophila LSv54]
 gi|61214607|sp|Q6AJM5|RF1_DESPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50877615|emb|CAG37455.1| probable peptide chain release factor 1 (RF-1) [Desulfotalea
           psychrophila LSv54]
          Length = 357

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/353 (34%), Positives = 190/353 (53%), Gaps = 31/353 (8%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           LFD +D+   R+  L  K  DP +  +  E + ++RE  HL    +  KE +   C ++ 
Sbjct: 2   LFDKFDDLDNRIEHLEGKLSDPEIVNDQKEFQKVVREHAHLSKLNTVYKEYK-TACQDV- 59

Query: 72  LLELALEEDDCSILQETSDN-----LQRIKLE------VEYKQFESLLSGEADSND---A 117
                  ED+ +IL +  ++     L + +LE      VE  +   ++    D ND    
Sbjct: 60  -------EDNKAILHDDGEDPDLKELAKAELEELNVRIVELDKAIKIILLPKDPNDEKNT 112

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           +LE+ AGAGG E+  +   L RMYTR+AE   +K E +  +     G K    LI G   
Sbjct: 113 FLEIRAGAGGDEAALFVADLFRMYTRFAETMGWKVEVMSSNPLGIGGFKEIIALISGEQV 172

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           +  LK E GVHR+ R+   ++  R HTS  ++ + P  ++ +E+ I  ++ + D +R+SG
Sbjct: 173 FSKLKYESGVHRVQRVPETETQGRIHTSAVTVAILPEAEE-VELHIDMNELKFDVFRSSG 231

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PTG+VV CQ E+SQHKNK +A  +LRA+L  L+  + E  A 
Sbjct: 232 PGGQSVNTTDSAVRITHLPTGLVVICQDEKSQHKNKVKALTVLRARL--LDKLESEHNAK 289

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           I E+ ++++G G    +IR+Y   P   V D R N+       ++ G LD+ +
Sbjct: 290 ISEARRSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKLETIMGGSLDEVI 341


>gi|313678949|ref|YP_004056688.1| bacterial peptide chain release factor 1 (brf-1) [Oceanithermus
           profundus DSM 14977]
 gi|313151664|gb|ADR35515.1| bacterial peptide chain release factor 1 (bRF-1) [Oceanithermus
           profundus DSM 14977]
          Length = 358

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 147/241 (60%), Gaps = 7/241 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  +A +E+ AG GG E+  +A  L  MYTR+AE+  ++ E LE H  +  G    + +
Sbjct: 102 ADVRNAIVEIRAGTGGQEAALFAGNLFEMYTRYAERLGYQVEMLESHPTDLGGFSKVSFM 161

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KGP AYG  K E GVHR+ R+   ++  R HTS +++ V P  ++S ++E+  S+ RID
Sbjct: 162 VKGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATVAVLPEAEES-DVELDMSEVRID 220

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
             RASG GGQ VNTTDSAVR+ H PTG+++  Q  RSQ KN+ +A ++LR++L  LE+++
Sbjct: 221 VMRASGPGGQGVNTTDSAVRVVHEPTGIIITIQDSRSQIKNREKALSILRSRL--LEMKR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            EE A +  S   +IG G    +IR+Y   P   V D R +    +   VL G+LD+  +
Sbjct: 279 AEEEAALRTSRLAQIGTGERSEKIRTYNF-PQSRVTDHRIHFTTHNLEGVLAGELDELTE 337

Query: 349 A 349
           A
Sbjct: 338 A 338


>gi|92113653|ref|YP_573581.1| peptide chain release factor 1 [Chromohalobacter salexigens DSM
           3043]
 gi|119361523|sp|Q1QXC6|RF1_CHRSD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91796743|gb|ABE58882.1| bacterial peptide chain release factor 1 (bRF-1) [Chromohalobacter
           salexigens DSM 3043]
          Length = 361

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 152/240 (63%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+++ +LE+ AG GG E+  +A  L RMY+R+AEK  ++ E +    GE+ G K     +
Sbjct: 109 DASNVFLEIRAGTGGDEAALFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G N Y  LK E G HR+ R+   +S  R HTS  ++ V        E+E++ +D R+DT
Sbjct: 169 RGDNVYARLKFESGAHRVQRVPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           +R+SGAGGQHVNTTDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A  +L A+L +  ++ Q
Sbjct: 229 FRSSGAGGQHVNTTDSAIRITHLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQ 288

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++++     ++ ++ +G G    +IR+Y   P   + D R N+      DV+ G+L + +
Sbjct: 289 RQQQ----ADTRRSLVGSGDRSERIRTYNF-PQGRITDHRINLTLYKLGDVMAGELGEVI 343


>gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
 gi|28201874|sp|Q8KG45|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
          Length = 357

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/277 (38%), Positives = 170/277 (61%), Gaps = 12/277 (4%)

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           AL E++   LQE    L Q++K+ +       L   EADS +A +E+ AG GG E+  +A
Sbjct: 75  ALVEEEAGELQERLPKLEQQLKILL-------LPKDEADSRNAIIEIRAGTGGDEAGLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             L+RMY R+AE++ +  + LE+ +G   G +K  +L + G N YG LK E GVHR+ R+
Sbjct: 128 ADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHNVYGILKFESGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +S+ V P  ++ +++EI + D  IDT+R+ G GGQ+VN  ++AVRIT
Sbjct: 188 PETETQGRIHTSAASVAVLPEAEE-VDVEIRKEDLLIDTFRSGGKGGQNVNKVETAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQI 312
           H+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY+L++ ++++  A++  S  T      +I
Sbjct: 247 HVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRADLRRSMVTTGDRSAKI 306

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           R+Y   P   V D R      +   ++ G+LD  ++A
Sbjct: 307 RTYNF-PQSRVTDHRIGFTSHALPQIMQGELDPLIEA 342


>gi|167644945|ref|YP_001682608.1| peptide chain release factor 1 [Caulobacter sp. K31]
 gi|167347375|gb|ABZ70110.1| peptide chain release factor 1 [Caulobacter sp. K31]
          Length = 334

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/280 (41%), Positives = 168/280 (60%), Gaps = 13/280 (4%)

Query: 81  DCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTESQDWANM 136
           D  +    SD +Q +  KL V  ++   +L+  + D N  A LEV AG GG E+  +A  
Sbjct: 46  DPEMAAMVSDEIQALDEKLPVMERELALMLAPRDKDENASAILEVRAGTGGDEAALFAGD 105

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+A+ + +K E   + +GE  G K     + G   +G  K E GVHR+ R+   
Sbjct: 106 LFRMYQRYAQLQGWKVEVDSVSEGEMGGYKEIIASVTGDGVFGRWKFESGVHRVQRVPAT 165

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P  +D +EIEI+++D RIDTYR+SGAGGQHVN TDSAVRITH+P
Sbjct: 166 EAQGRIHTSAATVAVLPEAED-VEIEINDADIRIDTYRSSGAGGQHVNKTDSAVRITHLP 224

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TGVVV    E+SQH+N+A+A   L+A+LY  +LQ+        ++ K+++G G    +IR
Sbjct: 225 TGVVV-TSSEKSQHQNRARAMKNLKARLY--DLQRTALDTARSDARKSQVGSGDRSERIR 281

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           +Y   P   V D R N+   +   V++GD LDD +K  +A
Sbjct: 282 TYNF-PQGRVTDHRINLTVYNLPKVMEGDALDDIIKPLIA 320


>gi|260062127|ref|YP_003195207.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
 gi|88783689|gb|EAR14860.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
          Length = 358

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 143/232 (61%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  L RMYT++ E R +KT  +++ +G   G K     +
Sbjct: 106 DAKDVVMEIRAGTGGDEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGFKEIHFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +++ V P  +D  +++I   D RID 
Sbjct: 166 SGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIDPKDVRIDY 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH+PTG+V QCQ E+SQHKNK +A+ +LR++LY++EL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHVPTGIVAQCQDEKSQHKNKDKAFKVLRSRLYDMELAKK 284

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +E      +S+   G    +IR+Y   P   V D R  +      ++++GD+
Sbjct: 285 QEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDI 335


>gi|302381433|ref|YP_003817256.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192061|gb|ADK99632.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 367

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 150/246 (60%), Gaps = 9/246 (3%)

Query: 111 EADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           +AD N  A LEV AG GG E+  +A  L RMY+R+A  R +K E     +G+  G K   
Sbjct: 112 DADENASAVLEVRAGTGGDEAALFAGDLFRMYSRYASTRGWKVELDSATEGDAGGYKEII 171

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             + G   +G LK E GVHR+ R+   ++  R HTS +++ V P V+D +EI+I + D R
Sbjct: 172 ATVTGDGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEVED-VEIDIQDKDIR 230

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDTYRASG+GGQHVN TDSAVRITH P+G+VV    E+SQH N+ +A   LR +LY+++ 
Sbjct: 231 IDTYRASGSGGQHVNKTDSAVRITHFPSGIVV-TSSEKSQHVNRDKAMKNLRVRLYDMQR 289

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           Q ++   +  ++ K+++G G    +IR+Y   P   V D R  +   S   +L+GDLD  
Sbjct: 290 QMKDNARS--DARKSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDAL 346

Query: 347 MKATLA 352
           + A +A
Sbjct: 347 LNALIA 352


>gi|295698659|ref|YP_003603314.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
 gi|291157243|gb|ADD79688.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
          Length = 346

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 180/307 (58%), Gaps = 13/307 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L RE   L   IS  K+I+    +   + +L L+E+  S+  E  + L  +K +VE +  
Sbjct: 38  LQREYTKLFKIISNFKKIESIRKEIEEIKKLILDEELKSLALEELNKLINLKKKVENRLR 97

Query: 105 ESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE- 162
             L    + D  D +LE+ AG GG+E+  +A  L RMY ++AE   +K E + I++ E  
Sbjct: 98  NQLTPKDQNDRKDCFLEIKAGTGGSEAAIFAKDLFRMYCKYAESCSWKVEIISINEIESG 157

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           +G K     I G   Y  LK E G HR+ RI   +S  R HTS   + +   VD S EI+
Sbjct: 158 SGYKEIIAKISGKEVYRKLKFESGGHRVQRIPETESRGRIHTSSCKVAILLKVDAS-EIK 216

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+++D RIDT+R+SGAGGQHVNTT+SA+R+THIPTG+ V+CQ ERSQHKN+A+A ++L A
Sbjct: 217 INQNDIRIDTFRSSGAGGQHVNTTNSAIRVTHIPTGISVECQDERSQHKNRAKAMSVLLA 276

Query: 283 KLYELELQKREEIANIGESSKTEIGWGR-----QIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +L  LEL+K  +     +S K +  +G      +IR+Y  Q   +V D RTN      ++
Sbjct: 277 RLKNLELKKVAQ----EKSYKKKFLFGSGERSDRIRTYNFQRGTIV-DHRTNSVTYQINE 331

Query: 338 VLDGDLD 344
           V++G L+
Sbjct: 332 VMNGKLE 338


>gi|229176005|ref|ZP_04303501.1| Peptide chain release factor 1 [Bacillus cereus MM3]
 gi|228607498|gb|EEK64824.1| Peptide chain release factor 1 [Bacillus cereus MM3]
          Length = 358

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ D   +++E    L+    + E  +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEDKLDADMRDMVKEEVSELE--GQDKELSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEISIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654]
          Length = 351

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 183/346 (52%), Gaps = 24/346 (6%)

Query: 16  WDNAVQRLSFLNTKT-------EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            D   QR  FL  K        E   + +   E K ++ E       +S I++ +  L D
Sbjct: 7   LDAITQRFQFLEAKMSQGLSGDEIAEVGREYAELKPVVEEIAAFRQLLSDIEDAEAMLSD 66

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              + ELA  ED+   L+E      R+ +  +  +   L    AD+  A +E+  G GG 
Sbjct: 67  PE-MRELA--EDELPGLRE------RLPVMEQAMRVALLPRDAADARPAMVEIRPGTGGD 117

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY R+AE R +K + LE    E  G+K     + G   +  LK E GVH
Sbjct: 118 EASLFAGDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEVVARVSGDGVFARLKFESGVH 177

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P  +D ++I I  +D RIDT RASGAGGQHVNTTDS
Sbjct: 178 RVQRVPETESGGRIHTSAATVAVLPEAED-VDIHIDPADIRIDTMRASGAGGQHVNTTDS 236

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+VV    E+SQH+N+  A  +L+ +L++ E Q+  +      + K ++G 
Sbjct: 237 AVRITHIPTGIVV-TSSEKSQHRNREIAMQVLKTRLFDAERQRAHD--ERASARKAQVGS 293

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   + D R N+      DV+ GDLD+ + A +
Sbjct: 294 GDRSERIRTYNF-PQGRMTDHRINLTLYKLGDVMQGDLDEVIDALI 338


>gi|126462320|ref|YP_001043434.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17029]
 gi|166223593|sp|A3PJZ6|RF1_RHOS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126103984|gb|ABN76662.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 351

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+  G GG E+  +A  LLRMY R+AE + ++ E L++   E  GI+ AT  
Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++EI  +D RID
Sbjct: 161 VEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADIRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+
Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +  +     K ++G G    +IR+Y   P   + D R N+   +   ++ GDL + + 
Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335

Query: 349 ATLA 352
           A  A
Sbjct: 336 ALTA 339


>gi|229033962|ref|ZP_04188916.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
 gi|228728388|gb|EEL79410.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
          Length = 358

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ D   +++E    L+    + E  +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEDKLDADMREMVKEEVSELE--GQDKELSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEISIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|148244818|ref|YP_001219512.1| peptide chain release factor 1 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166223616|sp|A5CW65|RF1_VESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146326645|dbj|BAF61788.1| peptide chain release factor RF-1 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 361

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/344 (36%), Positives = 192/344 (55%), Gaps = 25/344 (7%)

Query: 22  RLSFLNTKTEDPHLWQNV-------IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           RL  ++    DP +  NV       IE   L    Q     +S +K ++D         +
Sbjct: 15  RLEEVSIMLSDPEVVSNVKKFTKLSIEYAQLTPVNQQFQTYLSHLKNLED--------AQ 66

Query: 75  LALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           L L EDD  I    +E   N ++I  +++ K  +S+L  +  DS +  +E+ AG GG E+
Sbjct: 67  LILFEDDMEIKTMAKEEILNTKKILSQLDLKLKKSILPKDPNDSRNIIIEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L ++Y+R++EK+K+  E +    GE  G K     I G N Y  LK E G HR+
Sbjct: 127 SIFSGDLFKIYSRYSEKQKWTIEIISSSIGEHGGFKEIIARISGINVYSKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P V++  EI I+ +D RIDT+RASGAGGQHVN TDSAV
Sbjct: 187 QRVPTTESQGRIHTSACTVAIMPEVENIEEINININDVRIDTFRASGAGGQHVNKTDSAV 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG VV+CQ  RSQHKNKAQA ++L +++  L+ Q++E+      + K  IG G 
Sbjct: 247 RITHLPTGTVVECQDGRSQHKNKAQAMSVLASRI--LDAQQQEQQEQQSSTRKELIGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             ++IR+Y   P   + D R N+     +++++G+L   +K  +
Sbjct: 305 RSQRIRTYNY-PQGRITDHRINLTLYKLTEIMEGNLSAIIKPLI 347


>gi|283471335|emb|CAQ50546.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 358

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 147/240 (61%), Gaps = 8/240 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ A AGG E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  +
Sbjct: 106 DDKDVIVEIRAAAGGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ V P V+D +EIEI   D +IDT
Sbjct: 166 SGNGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  
Sbjct: 225 YRSSGAGGQHVNTTDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ-- 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE        K+ +G G    +IR+Y   P   V D R  +       +++G L++ + A
Sbjct: 282 EEQQKYASQRKSAVGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340


>gi|77463465|ref|YP_352969.1| peptide chain release factor 1 [Rhodobacter sphaeroides 2.4.1]
 gi|119361594|sp|Q3J2B6|RF1_RHOS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77387883|gb|ABA79068.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides 2.4.1]
          Length = 351

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+  G GG E+  +A  LLRMY R+AE + ++ E L++   E  GI+ AT  
Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++EI  +D RID
Sbjct: 161 VEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADIRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+
Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +  +     K ++G G    +IR+Y   P   + D R N+   +   ++ GDL + + 
Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335

Query: 349 ATLA 352
           A  A
Sbjct: 336 ALTA 339


>gi|221639323|ref|YP_002525585.1| peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
 gi|254790895|sp|B9KST8|RF1_RHOSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221160104|gb|ACM01084.1| Peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
          Length = 351

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+  G GG E+  +A  LLRMY R+AE + ++ E L++   E  GI+ AT  
Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++EI  +D RID
Sbjct: 161 VEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADLRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+
Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +  +     K ++G G    +IR+Y   P   + D R N+   +   ++ GDL + + 
Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335

Query: 349 ATLA 352
           A  A
Sbjct: 336 ALTA 339


>gi|29840418|ref|NP_829524.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
 gi|33301431|sp|Q822M2|RF1_CHLCV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29834767|gb|AAP05402.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
          Length = 361

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 189/345 (54%), Gaps = 19/345 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL----EL 75
           ++RL  +  K  +P +++N  E   L +E   L    S +K + D++     +L    E 
Sbjct: 9   LKRLEEVEVKISNPEIFENPKEYSSLSKEHARL----SELKNVYDKVLGQEKILNDDKEA 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131
             +E D  ++    + +Q  K EV+  YK  E+LL      +D    +E+ AG GG E+ 
Sbjct: 65  LAQEKDPEMIAMLEEGIQLGKAEVDKLYKVLENLLVPPDPDDDLNVIMELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +    +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ 
Sbjct: 125 LFVGDCVRMYHLYASTKGWKYEVLSASESDIGGYKEYVMGISGAAVKRLLQYEAGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   ++  R HTS  ++ V P   +D  E+ I E D +IDT+RASGAGGQHVN TDSAV
Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R++ A+   S+  ++G G 
Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRQKEASAMRSA--QVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y     + V D R  +   +   V++GDLD    A ++
Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYNLDKVMEGDLDAITSALVS 346


>gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
 gi|166027103|gb|EDR45860.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
          Length = 376

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 195/358 (54%), Gaps = 32/358 (8%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  + ++ ++P +  +    + LM+E+  L   +   KE   + C   I
Sbjct: 21  MFDKLEDLLIRLEEILSELQEPDVASDPNRFRKLMKEQSELTPIVEAYKEY--KACKQNI 78

Query: 72  --------------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
                         + ELA EE     L E+   ++ ++ E+   +   L     D  + 
Sbjct: 79  EESLELLNEESDEDMRELAKEE-----LNESKARVEELEHEL---KILLLPKDPNDDKNV 130

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +E+ AGAGG E+  +A  + RMY  +AE +++K E +E  +    G+K+ T +I G  A
Sbjct: 131 VVEIRAGAGGDEAALFAAEIYRMYLHYAESKRWKVELVECEEIGIGGMKNVTFMIDGQGA 190

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  +K E GVHR+ R+   +S  R HTS  ++ V P  +D +++ I E D RID  RASG
Sbjct: 191 YSMMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAED-VDVHIDEKDIRIDVMRASG 249

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY+LE QK+ +   
Sbjct: 250 NGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDLECQKQHDAE- 308

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             E+ K++IG G    +IR+Y   P   V D R  +       +++GD+ + + A +A
Sbjct: 309 -AEARKSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIA 364


>gi|260438934|ref|ZP_05792750.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
 gi|292808585|gb|EFF67790.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
          Length = 358

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMYT +AE R++K E +   +    G+K    ++
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAELFRMYTHYAEARRWKVEVVNSDETGIGGMKEVEFMV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS +S+ V P  ++ +E++I E D RID 
Sbjct: 166 TGQGAYSVLKYESGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-VEVQIDEKDIRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK 
Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKA 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +     ++ +++IG G    +IR+Y   P   V D R  +       +L+GD+ + + A
Sbjct: 285 HDAE--ADARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKILNGDIQEIIDA 341

Query: 350 TLA 352
            +A
Sbjct: 342 CIA 344


>gi|254515300|ref|ZP_05127361.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
 gi|219677543|gb|EED33908.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
          Length = 361

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 180/325 (55%), Gaps = 23/325 (7%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----E 87
           DP +  +  + + L RE   L+  +    E Q  L D +   +  L +DD  + +    E
Sbjct: 25  DPGVIADQDQFRQLSREYSELETVVKCFGEYQALLGD-IEAAQSMLADDDADMREMAKAE 83

Query: 88  TSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
            S+   +R  LE E  Q   L     DS++ +LE+ AG GG E+  ++  L RMYTR+AE
Sbjct: 84  ISEGEARREALEAEL-QVLLLPRDPRDSHNVFLEIRAGTGGDEAAIFSGDLQRMYTRFAE 142

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ ++ E L    GE  G K     I+G + Y +LK E G HR+ R+   +S  R HTS 
Sbjct: 143 RQGWRLEVLSERPGEHGGYKEIISRIEGTDVYAYLKFESGAHRVQRVPETESQGRIHTSA 202

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ +    ++   IEI+++D R+DTYR+SGAGGQHVN TDSAVR+TH+PTG+VV+CQ E
Sbjct: 203 CTVAILAEPEELEAIEINKADLRVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVECQDE 262

Query: 267 RSQHKNKAQAWNMLRAKL--------YELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           RSQHKN+A+A ++L+AKL           + ++R  +   G+ S        +IR+Y   
Sbjct: 263 RSQHKNRARAMSLLQAKLTSSAEAAQASEQAEQRRNLVGTGDRSD-------RIRTYNF- 314

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDL 343
           P   V D R N+      +V+ GD+
Sbjct: 315 PQGRVTDHRINLTLYKLDEVMAGDM 339


>gi|307321056|ref|ZP_07600462.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
 gi|306893331|gb|EFN24111.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
          Length = 360

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A  + ++ E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGNLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +++ R HTS +++ V P  ++ I+I++   D R+D
Sbjct: 167 VSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEE-IDIDVRPEDIRVD 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITHIPTG+VV    E+SQH+N+A+A  +LR++LY++E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDMERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      ++++G G    +IR+Y   P   + D R N+       +++G++DD + 
Sbjct: 285 AD--SERSADRRSQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVD 341

Query: 349 ATLA 352
           A LA
Sbjct: 342 ALLA 345


>gi|171462958|ref|YP_001797071.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692839|sp|B1XSY0|RF1_POLNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171192496|gb|ACB43457.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 359

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/247 (39%), Positives = 145/247 (58%), Gaps = 16/247 (6%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  + +LE+ AG GG E   +A  LLRMYTR+AE++ +K E +   + +  G K   L
Sbjct: 105 ENDERNVFLEIRAGTGGDEGALFAGDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVL 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G   Y  LK E G HR+ R+   ++  R HTS  ++ V P  D+   ++I+ ++ RI
Sbjct: 165 RLVGQAVYSRLKFESGGHRVQRVPQTETQGRIHTSACTVAVMPETDELEAVKINPAELRI 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL------ 284
           DT+RASGAGGQH+N TDSA+RITH+PTG VV+CQ +RSQH+N+ QA  +L +++      
Sbjct: 225 DTFRASGAGGQHINKTDSAIRITHLPTGTVVECQDDRSQHRNREQAMKVLVSRIMDARER 284

Query: 285 --YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             ++LE Q R+ +   G+ S        +IR+Y   P   + D R N+       ++DGD
Sbjct: 285 EKHQLEAQTRKSLVGTGDRSD-------RIRTYNF-PQGRITDHRINLTLYKIDAMMDGD 336

Query: 343 LDDFMKA 349
           +DD   A
Sbjct: 337 IDDLCNA 343


>gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
 gi|317116214|gb|ADU98702.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
          Length = 360

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++E+ AG GG ES  +A  L RMYTR+A  + +K E +  ++ E  G K   L I
Sbjct: 107 DERNAFVEIRAGTGGDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G +AYG L+ E G HR+ R+   ++  R HTS  ++ V P  D++  I ++ +D RIDT
Sbjct: 167 EGDHAYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  + 
Sbjct: 227 FRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKE--RS 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K  IG G    +IR+Y   P   + D R N+       V++GDL + ++A
Sbjct: 285 ERAAKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQA 343


>gi|62185243|ref|YP_220028.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
 gi|81312600|sp|Q5L5L4|RF1_CHLAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62148310|emb|CAH64077.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
          Length = 361

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 187/345 (54%), Gaps = 19/345 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL----EL 75
           ++RL  +  +  +P ++ N  E  +L +E   L    S +K   DR+     +L    + 
Sbjct: 9   LKRLEEVEVEISNPEIFNNPKEYSLLSKEHARL----SELKNTYDRVMAQEKVLSDDKQA 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131
             +E D  ++    + +Q  K EVE  YK  E+LL      +D    +E+ AG GG E+ 
Sbjct: 65  LAQEKDPEMIAMLEEGIQSGKAEVEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +    +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ 
Sbjct: 125 LFVGDCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   ++  R HTS  ++ V P   +D  E+ I E D +IDT+RASGAGGQHVN TDSAV
Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S+  ++G G 
Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEIQRRHKEASAMRSA--QVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y     + V D R  +   S   V++GDLD    A ++
Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYSLDKVMEGDLDTITSALVS 346


>gi|229014499|ref|ZP_04171617.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
 gi|229136148|ref|ZP_04264901.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|229170037|ref|ZP_04297729.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228613462|gb|EEK70595.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228647307|gb|EEL03389.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|228746849|gb|EEL96734.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
          Length = 358

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ D   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEDKLDADMRDMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|15618037|ref|NP_224321.1| peptide chain release factor 1 [Chlamydophila pneumoniae CWL029]
 gi|15835649|ref|NP_300173.1| peptide chain release factor 1 [Chlamydophila pneumoniae J138]
 gi|16752931|ref|NP_445202.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|33241449|ref|NP_876390.1| peptide chain release factor 1 [Chlamydophila pneumoniae TW-183]
 gi|6225941|sp|Q9Z968|RF1_CHLPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4376376|gb|AAD18266.1| Peptide Chain Releasing Factor [Chlamydophila pneumoniae CWL029]
 gi|7189573|gb|AAF38472.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|8978487|dbj|BAA98324.1| peptide chain releasing factor [Chlamydophila pneumoniae J138]
 gi|33235957|gb|AAP98047.1| translation releasing factor RF-1 [Chlamydophila pneumoniae TW-183]
 gi|269302994|gb|ACZ33094.1| peptide chain release factor 1 [Chlamydophila pneumoniae LPCoLN]
          Length = 357

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/343 (36%), Positives = 188/343 (54%), Gaps = 15/343 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL---DNAISFIKEIQDRLCDNLILLELA 76
           + RL+ +  K  +P ++ N  E   L +E  +L    NA   I  ++  L D+     LA
Sbjct: 9   LNRLAEVEIKISNPEIFSNSKEYSALSKEHSYLLELKNAYDKILNLEKVLADDK--QALA 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDW 133
           +E+D +  ++ E   N  +++LE   K  ESLL      +D    +E+ AG GG E+  +
Sbjct: 67  IEKDPEMVVMLEEGINENKVELEKLNKILESLLVPPDPDDDLNVIMELRAGTGGEEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
               +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+
Sbjct: 127 VGDCVRMYHLYASSKGWKYEVLSASESDLKGYKEYVMGISGTGVKRLLQYEAGTHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              ++  R HTS  +I V P   ++  E+ I+E D +IDT+RASGAGGQHVN TDSAVRI
Sbjct: 187 PETETQGRVHTSAITIAVLPEPSEEDTELLINEKDLKIDTFRASGAGGQHVNVTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV CQ ERSQHKNK +A  +L+A++ + E+QKR   A+   S+  ++G G   
Sbjct: 247 THLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRHNEASAMRSA--QVGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y     + V D R  +   +   V++GDLD    A ++
Sbjct: 305 ERIRTYNFSQNR-VTDHRIGLTLYNLDKVMEGDLDPITTAMVS 346


>gi|114330834|ref|YP_747056.1| peptide chain release factor 1 [Nitrosomonas eutropha C91]
 gi|122314234|sp|Q0AHU1|RF1_NITEC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114307848|gb|ABI59091.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosomonas
           eutropha C91]
          Length = 359

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 176/314 (56%), Gaps = 8/314 (2%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L RER  ++    F    Q    D    +E++++       +   D  ++   ++E +
Sbjct: 36  RKLSRERSEIEPVTRFYHTYQQVEQDLATAMEMSVDPQFRDFAEAEIDADKQKLADIETE 95

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
             + LL  +  D  + +LE+ AG GG ES  +A  L RMY+R+AE+  ++ E +  +  E
Sbjct: 96  ILKQLLPRDPNDERNIFLEIRAGTGGDESALFAGDLFRMYSRYAEREGWQVEIVSQNPSE 155

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     I G  AY  LK E G HR+ R+   ++  R HTS  ++ V P  D+   +
Sbjct: 156 VGGYKEIIARIIGHGAYSRLKFESGAHRVQRVPATETQGRVHTSTCTVAVLPEADEISGV 215

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            ++ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+V +CQ+ RSQHKNKAQA ++L 
Sbjct: 216 TLNPADLRIDTFRASGAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLI 275

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +++  L+ Q R + A    + K+ +G G    +IR+Y   P   + D R N+       +
Sbjct: 276 SRI--LDKQVRAQQAEQAAARKSLVGSGERSERIRTYNF-PQGRITDHRINLTLYKIEQI 332

Query: 339 LDGDLDDFMKATLA 352
           +DG+LD+   +TLA
Sbjct: 333 MDGELDELC-STLA 345


>gi|57505831|ref|ZP_00371756.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
 gi|57015861|gb|EAL52650.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
          Length = 355

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 149/244 (61%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   L++ Y ++A+ R +K E +   +G   G K   +L+
Sbjct: 104 DEKNIFLEIRAGTGGDEASLFVGDLVKAYAKYADLRGYKIEIVSSSEGSAGGFKELIMLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ RI   +S  R HTS  ++ + P VDD IEI+I+ +D +ID 
Sbjct: 164 KGTGAYSRLKFESGTHRVQRIPQTESQGRIHTSAITVAIMPEVDD-IEIQINPNDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITHIP+G+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ 
Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPSGLVVVNQDGKSQHKNKESAMKILKARLY--EMQES 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMK 348
           E +A   E+ K+++G G    +IR+Y   P   + D R N+       +++G L D+ ++
Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINLTLYRLDAIMEGGLFDELIE 339

Query: 349 ATLA 352
             +A
Sbjct: 340 PLIA 343


>gi|119361587|sp|Q2K3T1|RF1_RHIEC RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 359

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++++ + 
Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALMA 345


>gi|312131222|ref|YP_003998562.1| bacterial peptide chain release factor 1 (brf-1) [Leadbetterella
           byssophila DSM 17132]
 gi|311907768|gb|ADQ18209.1| bacterial peptide chain release factor 1 (bRF-1) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 171/302 (56%), Gaps = 22/302 (7%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           HLD A   +   +D     +  LEL              D L   K E E +  E L+  
Sbjct: 58  HLDEAKEILATEKDEEMREMAKLEL--------------DELSPKKEEAEERLKELLIPK 103

Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           +  DS D+ LE+ AG GG E+  +A  L RMY R+A ++ ++   ++  D    G K   
Sbjct: 104 DPNDSKDSILEIRAGTGGDEASIFAGDLFRMYQRFAAQQGWQFTVMDFTDAPSGGYKEIV 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + +KG + YG LK E GVHR+ R+   +S  R HTS +++ V P  D+ ++++I+ +D R
Sbjct: 164 VSVKGEDVYGKLKYESGVHRVQRVPATESQGRIHTSAATVAVLPEADE-VDVQINMNDIR 222

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            DT+ +SGAGGQ VNTT SAVR+THIPTG+VVQCQ ERSQ KN  +A  +LR++LYE+EL
Sbjct: 223 KDTFCSSGAGGQSVNTTYSAVRVTHIPTGLVVQCQDERSQIKNFDKALTVLRSRLYEIEL 282

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            K+ E  +I    K+ +G G    +IR+Y   P   V D R      +   V++G++ +F
Sbjct: 283 AKQNE--SIAGERKSLVGSGDRSDKIRTYNY-PQGRVTDHRIGFTVYNLPHVMEGNIGEF 339

Query: 347 MK 348
           ++
Sbjct: 340 IE 341


>gi|307296979|ref|ZP_07576795.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
 gi|306877505|gb|EFN08733.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
          Length = 363

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 153/245 (62%), Gaps = 8/245 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+ AG GG E+  +A  L RMY R+A+ + +K E +  +  E  G K     
Sbjct: 109 ADARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVAS 168

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I++SD +ID
Sbjct: 169 VTGVGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEE-VDVQIADSDLKID 227

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVNTTDSAVRITH+P+G+VV  Q ERSQHKNKA+A  +LRA++YE+E ++
Sbjct: 228 IYRASGAGGQHVNTTDSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVE-RE 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           R +    G + K  +G G    +IR+Y   P   V D R N+      ++L+G  L + +
Sbjct: 287 RAQSEQAG-ARKAMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVI 344

Query: 348 KATLA 352
            A +A
Sbjct: 345 DALVA 349


>gi|323496829|ref|ZP_08101866.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
 gi|323318088|gb|EGA71062.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
          Length = 362

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 184/330 (55%), Gaps = 17/330 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84
           DP +  +  + + L +E   L+      +  Q +  ++L+  E    EDD  +       
Sbjct: 25  DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++E  D ++R+  E+   Q   L     D  + +LE+ AGAGG E+  +A  L RMY+++
Sbjct: 84  IKEAKDAIERLSDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKF 140

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HT
Sbjct: 141 AEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ
Sbjct: 201 SACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
            ERSQHKNKA+A  +L A++  ++ ++ +  A   ++ +  +G G    +IR+Y   P  
Sbjct: 261 DERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQG 317

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            V D R N+     ++V++GD+   +   +
Sbjct: 318 RVSDHRINLTLYRLNEVMEGDVSSLIDPVI 347


>gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 358

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 184/340 (54%), Gaps = 11/340 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +     L  +  DP    +    +   +    L   ++   +++    D     ELA
Sbjct: 9   DDILAEYQGLEAQMADPEFANDPDNVRKAGKRYSQLQPIVNLNTQLEQARADLADAKELA 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
            E+   S      + L+   +E+E K  + L   +  D +D  +E+ AGAGG E+  +A 
Sbjct: 69  YED---SAFTAEVERLEPKVVELEEKLADMLAPRDPHDPDDMVMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHRL 190
            L+RMY R+AEK  F TE L+  + +  G+K  TL I+  N     A+   K E GVHR+
Sbjct: 126 ELVRMYQRYAEKHGFITEVLDESESDLGGVKDMTLSIRSKNPSQDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +SN R  TS + + VYP  D+  ++EI E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRIPVTESNGRIQTSAAGVLVYPEPDEVGQVEIDEKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           R+TH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E +K E  A  G  ++   +   
Sbjct: 246 RLTHLPTGIIVTCQKERSQIQNKARAMQVLQARLQQIEEEKAEAEAAEGRHAQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +IR+Y   P   + D R   +  +   VLDGD+D  + A
Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMDALLMA 344


>gi|330823524|ref|YP_004386827.1| peptide chain release factor 1 [Alicycliphilus denitrificans K601]
 gi|329308896|gb|AEB83311.1| Peptide chain release factor 1 [Alicycliphilus denitrificans K601]
          Length = 371

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++E+ AG GG ES  +A  L RMYTR+A  + +K E +  ++ E  G K   L I
Sbjct: 118 DERNAFVEIRAGTGGDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRI 177

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G +AYG L+ E G HR+ R+   ++  R HTS  ++ V P  D++  I ++ +D RIDT
Sbjct: 178 EGDHAYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDT 237

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  + 
Sbjct: 238 FRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKE--RS 295

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K  IG G    +IR+Y   P   + D R N+       V++GDL + ++A
Sbjct: 296 ERAAKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQA 354


>gi|229064980|ref|ZP_04200278.1| Peptide chain release factor 1 [Bacillus cereus AH603]
 gi|228716281|gb|EEL67993.1| Peptide chain release factor 1 [Bacillus cereus AH603]
          Length = 358

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +
Sbjct: 1   MNGVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ D   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEDKLDADMRDMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|330723258|gb|AEC45628.1| peptide chain release factor 1 [Mycoplasma hyorhinis MCLD]
          Length = 383

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 180/346 (52%), Gaps = 27/346 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++   L+ +  DP +  N+ E   + +E   +++ +   K           L ++++ ED
Sbjct: 36  EKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNY---------LKQVSIIED 86

Query: 81  DCSILQETS---DNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGT 128
              +LQE      NL + ++ +  K+ E          L   E D  +  +E+   AGG 
Sbjct: 87  SKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAGGD 146

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L +MY +WAE +K+  + L        G      L+ G   Y  LK E GVH
Sbjct: 147 EANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESGVH 206

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   ++  R HTS +++ + P VDD I+++I   D RIDTYR+SGAGGQ VNTTDS
Sbjct: 207 RVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTTDS 266

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+V   Q  RSQ  NK  A  +L++K+Y LE++K++ I   G+  K     
Sbjct: 267 AVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIE--GQFRKLAGSG 324

Query: 309 GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            R  +IR+Y   P   V D R +   TS  +V+ G+LD  + A LA
Sbjct: 325 ARSEKIRTYNY-PQDRVTDHRISFS-TSLKNVIVGNLDPIIDALLA 368


>gi|255262532|ref|ZP_05341874.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
 gi|255104867|gb|EET47541.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
          Length = 351

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/314 (38%), Positives = 171/314 (54%), Gaps = 17/314 (5%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYK-QF 104
           +E   L   I  I E Q  L  +L   EL + + D   L E    + R +L E+E   Q 
Sbjct: 35  KEYSDLRPVIDVITEYQT-LEADLAEAELMMSDPDMKELAEEELPMLRARLPEIEQNLQI 93

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             L    AD+  A +E+  G GG E+  +A  LLRMY R+AE R +  E +E    E  G
Sbjct: 94  ALLPKDAADARPAMIEIRPGTGGDEAALFAGDLLRMYQRYAEARGWTFEIIEEQSTELGG 153

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK  T  +KG   +  +K E GVHR+ R+   +S  R HTS +++ V P  +D ++I+I 
Sbjct: 154 IKEVTAHVKGEGVFARMKYESGVHRVQRVPTTESGGRIHTSAATVAVLPEAED-VDIQID 212

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D RIDT RASG+GGQHVNTTDSAVRITHIP+G+VV    E+SQH+N+  A   L+ +L
Sbjct: 213 PGDLRIDTMRASGSGGQHVNTTDSAVRITHIPSGIVV-VSSEKSQHRNREIAMLTLKTRL 271

Query: 285 YELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           Y+ E Q+       +  A IG   ++E     +IR+Y   P   + D R N+       V
Sbjct: 272 YDAERQRVDGERSADRAAQIGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDQV 325

Query: 339 LDGDLDDFMKATLA 352
           + GDLD+ ++A  A
Sbjct: 326 MQGDLDETIEALTA 339


>gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola sp. JR]
 gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR]
          Length = 355

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A  L RMY+R+AE + +KTE L  +  +  G K    LI
Sbjct: 106 DEKNVIMEIRGGAGGEEAALFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGFKEIIFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S+ R HTS  ++ V P  ++ ++++I  +D RID 
Sbjct: 166 EGQGAYSRLKFESGVHRVQRVPTTESSGRIHTSTVTVAVLPEAEE-VDVDIDPNDLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+THIPTG+VV CQ E+SQHKNK +A  +LRA+L  L+  + 
Sbjct: 225 FCSSGPGGQSVNTTQSAVRVTHIPTGIVVSCQDEKSQHKNKEKALRVLRARL--LDKAQE 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +  + K+++G G    +IR+Y   P   V D R  +       VL+GDLD+ ++A
Sbjct: 283 EQRNQLASTRKSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKLDMVLEGDLDEIIEA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|260433480|ref|ZP_05787451.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417308|gb|EEX10567.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 351

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/256 (41%), Positives = 150/256 (58%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    AD+  A LE+  G GG E+  +A  LLRMY R+AE R ++ E +E    E 
Sbjct: 92  QLALLPKDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWQFEIIEEQHTEL 151

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            GIK     IKG N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I+
Sbjct: 152 GGIKEVVAHIKGDNVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQ 210

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+ 
Sbjct: 211 IDPNDIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLKT 269

Query: 283 KLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LY+LE Q+       +  + +G   ++E     +IR+Y   P   + D R N+      
Sbjct: 270 RLYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLD 323

Query: 337 DVLDGDLDDFMKATLA 352
            ++ GDLD+ + A  A
Sbjct: 324 QIMQGDLDEVIDALTA 339


>gi|323492377|ref|ZP_08097530.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
 gi|323313424|gb|EGA66535.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
          Length = 362

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/319 (36%), Positives = 181/319 (56%), Gaps = 11/319 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  + + L +E   L+      +  Q +  ++L+  E    EDD  + +   + 
Sbjct: 25  DPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+++AEK
Sbjct: 84  IKEAKEAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HTS  
Sbjct: 144 KGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER
Sbjct: 204 TVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A  +L A++  ++ ++ +  A   ++ +  +G G    +IR+Y   P   V 
Sbjct: 264 SQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320

Query: 325 DLRTNIEKTSPSDVLDGDL 343
           D R N+     ++V++GD+
Sbjct: 321 DHRINLTIYRLNEVMEGDV 339


>gi|110680314|ref|YP_683321.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
 gi|119361597|sp|Q164F8|RF1_ROSDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109456430|gb|ABG32635.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
          Length = 351

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/248 (41%), Positives = 150/248 (60%), Gaps = 14/248 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +AD+  A LE+  G GG E+  +A  L RMY R+AE + +K + +E+ + E  GIK    
Sbjct: 100 KADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDLIELQETELGGIKEVVA 159

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I I  +D RI
Sbjct: 160 HIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIHIDANDLRI 218

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+A+LY+LE  
Sbjct: 219 DTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKARLYDLERS 277

Query: 291 KREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           + ++       A +G   ++E     +IR+Y   P   + D R N+       VL GDLD
Sbjct: 278 RVDDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYRLDAVLQGDLD 331

Query: 345 DFMKATLA 352
           + + A  A
Sbjct: 332 EIIDALTA 339


>gi|15966364|ref|NP_386717.1| peptide chain release factor 1 [Sinorhizobium meliloti 1021]
 gi|307313049|ref|ZP_07592676.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
 gi|20139338|sp|Q92MK5|RF1_RHIME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15075635|emb|CAC47190.1| Probable peptide chain release factor 1 (RF-1) protein
           [Sinorhizobium meliloti 1021]
 gi|306899368|gb|EFN30002.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
          Length = 360

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A  + ++ E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +++ R HTS +++ V P  ++ I+I++   D R+D
Sbjct: 167 VSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEE-IDIDVRPEDIRVD 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITHIPTG+VV    E+SQH+N+A+A  +LR++LY++E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDMERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      ++++G G    +IR+Y   P   + D R N+       +++G++DD + 
Sbjct: 285 AD--SERSADRRSQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVD 341

Query: 349 ATLA 352
           A LA
Sbjct: 342 ALLA 345


>gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SS3/4]
          Length = 357

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/353 (34%), Positives = 202/353 (57%), Gaps = 22/353 (6%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  D+ ++    L  +  +P + ++  + + LM+E+  L    +A    K+ +  + D
Sbjct: 1   MFDRLDDMLRHYEELMLELNNPSVAEDQRKFRKLMKEQADLAPIVDAYKQYKQAKQDVED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124
           +L LL+   +E+   +  +E +D  +RI+   E +Q   +L    D ND     +E+ AG
Sbjct: 61  SLALLDEESDEEMKELAKEELADAKKRIE---ELEQELKILLLPKDPNDEKNVIVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A+ L RMY  +AE + +KTE + + +    G+K    +I G  AY  LK E
Sbjct: 118 AGGDEAALFASELYRMYVHYAESQHWKTEMINVSESGIGGMKEVEFMITGHGAYSKLKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +++ + P  ++  ++ I + D RID  RASG GGQ VN
Sbjct: 178 SGVHRVQRVPETESGGRIHTSTATVAIMPEAEE-FDVVIDDKDIRIDVMRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESS 302
           TTDSAVR+THIPTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL++R  EE A      
Sbjct: 237 TTDSAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELERRQNEEAA----ER 292

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +++IG G    +IR+Y   P   V D R  +       ++DGD+ + + + +A
Sbjct: 293 RSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDAIMDGDIQELIDSLIA 344


>gi|157165147|ref|YP_001465968.1| peptide chain release factor 1 [Campylobacter concisus 13826]
 gi|166223539|sp|A7ZB10|RF1_CAMC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112801757|gb|EAT99101.1| peptide chain release factor 1 [Campylobacter concisus 13826]
          Length = 355

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 181/320 (56%), Gaps = 18/320 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           + R   ++T   DP++  ++ +   L +E+  ++    A +   +I + + +N  LLE A
Sbjct: 10  LDRYDEISTLLSDPNIANDIEKMTKLSKEQSSIEPVATAATKYLQILNDIEENKALLEDA 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133
            E  + +  +  S  + R KLE E K    +L    D ND    +LE+ AG GG E+  +
Sbjct: 70  -ELGELAKEELKSLEISREKLEEEIK----ILLLPKDPNDDKNIFLEIRAGTGGDEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L   Y R+AE R +K E +   +G   G K   +LIKG  AY  LK E G HR+ R+
Sbjct: 125 AGDLFNAYIRYAELRGYKFEIVSQSEGNTGGFKEIIVLIKGKGAYSRLKFEGGTHRVQRV 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P V+DS EIEI+ +D R+D  R+SG GGQ VNTTDSAVRIT
Sbjct: 185 PETESQGRVHTSAVTVAIMPEVEDS-EIEINPNDIRVDVMRSSGHGGQSVNTTDSAVRIT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           HIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q++E +A      K+++G G    
Sbjct: 244 HIPTGLVVTNQDGKSQHKNKEAAMKVLKARLY--EMQEQERLAKETSERKSQVGTGDRSG 301

Query: 311 QIRSYVLQPYQMVKDLRTNI 330
           +IR+Y   P   + D R N+
Sbjct: 302 RIRTYNY-PQNRISDHRINL 320


>gi|86359340|ref|YP_471232.1| peptide chain release factor 1 [Rhizobium etli CFN 42]
 gi|86283442|gb|ABC92505.1| peptide chain release factor 1 protein [Rhizobium etli CFN 42]
          Length = 351

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L   +GE  G K     
Sbjct: 99  ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIAT 158

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 159 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 217

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 218 TMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 276

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++++ + 
Sbjct: 277 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 333

Query: 349 ATLA 352
           A +A
Sbjct: 334 ALMA 337


>gi|323486285|ref|ZP_08091611.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323693924|ref|ZP_08108111.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
 gi|323400395|gb|EGA92767.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323502021|gb|EGB17896.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
          Length = 357

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/355 (35%), Positives = 199/355 (56%), Gaps = 26/355 (7%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLC 67
           +FD  D+ + R   L  +   P +  +    + LM+E+  L   +   KE     QD + 
Sbjct: 1   MFDRLDDLLIRYEELLEELNSPDVAMDQNRFRKLMKEQADLTPLVDAYKEYKKANQD-VE 59

Query: 68  DNLILLELALEEDDCSIL----QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLE 120
           D+L LLE   EE D  +     +E +D  +RI+   E +Q   +L    D ND     +E
Sbjct: 60  DSLALLE---EESDEEMRDMAKEELADAKKRIE---EMEQQLKILLLPKDPNDDKNVMVE 113

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGG E+  +A+ L RMY  +AE  ++KTE + +++    G K    ++ G  AY  
Sbjct: 114 IRAGAGGDEAALFASELYRMYVHFAESNRWKTELVSVNENGIGGFKEVVFMVTGQGAYSK 173

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHR+ R+   +S  R HTS +S+ V P  ++  ++ I + D RID  RASG GG
Sbjct: 174 MKYESGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-FDVVIDDKDIRIDVMRASGNGG 232

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+      E
Sbjct: 233 QCVNTTDSAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQN--QEAE 290

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +++IG G    +IR+Y   P   V + R  +       V++G+L++ + + +A
Sbjct: 291 ERRSQIGTGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMNGELNELIDSLIA 344


>gi|313903650|ref|ZP_07837040.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466203|gb|EFR61727.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 389

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/266 (38%), Positives = 157/266 (59%), Gaps = 13/266 (4%)

Query: 96  KLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +LE E +  E  L G        D  D  +E+ AG GG E+  +A  L RMY R+AE++ 
Sbjct: 116 RLEGERQALERALRGLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGDLFRMYQRYAERQG 175

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++TE +   + +  G K     + G  A+  LK E GVHR+ R+   ++  R HTS +++
Sbjct: 176 WRTEIMAATESDLGGFKEIIFAVSGRGAFSRLKHESGVHRVQRVPVTEAGGRIHTSTATV 235

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ +E++I   D  IDT+ ASG GGQHVN T+SAVRITH PTG+VV CQ ERSQ
Sbjct: 236 AVLPEAEE-VEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPTGIVVTCQDERSQ 294

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
           HKN+A+A  +LRA+L +   ++++E   + +  ++++G G    +IR+Y  +  + V D 
Sbjct: 295 HKNRARAMKILRARLLDYYTRRQQE--ELSQQRRSQVGTGERSEKIRTYNFRENR-VTDH 351

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           R  +      +V+DGDLD+ + A  A
Sbjct: 352 RIGLTLYRLQEVMDGDLDELLDALAA 377


>gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
 gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
          Length = 357

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/246 (43%), Positives = 149/246 (60%), Gaps = 13/246 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS+D  +E+ +GAGG E+  +A  L RMY R+AEK  F TE L + + +  G+K  T+ I
Sbjct: 103 DSDDIVMELKSGAGGEEAALFAGELARMYQRYAEKHGFTTEILGLSESDLGGVKDMTMSI 162

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P+   A+   K E GVHR+ R+   +S  R  TS + + VYP  D+  +I+I E D
Sbjct: 163 RAKTPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDIQIDEKD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVR+TH+PTG+VV CQ+ERSQ +NKA+A  +L A+L ++
Sbjct: 223 LRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGLVVTCQKERSQIQNKARAMQVLAARLQQM 282

Query: 288 ELQKREEIANIG----ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
              K EEIA       +S    +    +IR+Y   P   V D R   +  +   VL GD+
Sbjct: 283 ---KEEEIAEAASDQRKSQVRNMDRSERIRTYNF-PENRVSDHRIGYKAHNLDSVLGGDM 338

Query: 344 DDFMKA 349
           DD +KA
Sbjct: 339 DDLLKA 344


>gi|154174699|ref|YP_001407404.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
 gi|166223540|sp|A7GW12|RF1_CAMC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112802322|gb|EAT99666.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
          Length = 355

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/327 (38%), Positives = 178/327 (54%), Gaps = 26/327 (7%)

Query: 32  DPHLWQNVIEAKMLMRERQHLD---NAIS-FIKEIQD-----RLCDNLILLELALEE-DD 81
           DP++  ++ +   L +E+  ++   NA S +++ + D      L D+  L ELA EE   
Sbjct: 22  DPNIINDIEKMTKLSKEQSSIEPIKNAASQYLQTLDDIEENKALLDDAELGELAREELKS 81

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
             I +E  +N  +I L         L     D  + +LE+ AG GG E+  +   L   Y
Sbjct: 82  AQIRKEELENEIKILL---------LPKDPNDDKNIFLEIRAGTGGDEAALFVGDLFNAY 132

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+A+ R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+   +S  R
Sbjct: 133 IRYADLRGYKFEIVSQSEGSAGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQGR 192

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS  ++ + P V+DS EIEI+ +D RID  R+SG GGQ VNTTDSAVRITHIPTG+VV
Sbjct: 193 VHTSAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGLVV 251

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQ 318
             Q  +SQHKNK  A  +L+A+LY  E+Q+ E IA      K+++G G    +IR+Y   
Sbjct: 252 TNQDGKSQHKNKEAAMKVLKARLY--EMQEAERIAKETSERKSQVGTGDRSGRIRTYNF- 308

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           P   + D R N+       ++ G L D
Sbjct: 309 PQNRISDHRINLTLYRLDAIMAGGLFD 335


>gi|297183691|gb|ADI19816.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_37G09]
          Length = 357

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/243 (44%), Positives = 146/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LEV AG GG E+  +A  L  MY R A +  +K E +EI +    G K AT  I
Sbjct: 108 DSRNAILEVRAGTGGDEAALFAADLFGMYQRTASRYGWKFEVMEISETGIGGYKEATANI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   ++  R HTS +++ V P   D ++IE+SESD R+D 
Sbjct: 168 SGQDVFARLKFESGVHRVQRVPETETGGRIHTSAATVAVLPEAQD-VDIEVSESDLRVDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKN+A+A  +LRA++Y+ E  ++
Sbjct: 227 FRASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A    S K ++G G    +IR+Y   P   V D R N        VL G+  D +  
Sbjct: 287 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINFTLYKLDKVLAGEAIDEVID 343

Query: 350 TLA 352
            LA
Sbjct: 344 ALA 346


>gi|304438485|ref|ZP_07398425.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304368568|gb|EFM22253.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 354

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 144/238 (60%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +A  L RMY R+AE++ ++TE L  +  E  G K  T L+
Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEVLSSNPTEIGGFKEITFLV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   +S  R HTS  ++ V P  ++ +E+ I  +D RIDT
Sbjct: 165 SGAGAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEE-VEVTIDPNDLRIDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQ+VN T++A+RITHIPTG+VVQCQ E+SQ KN+ +A  +LRA+LY+   Q  
Sbjct: 224 YCASGAGGQYVNRTETAIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQ-- 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E+   +    ++++G G    +IR+Y   P   V D R  +       V+DG+LD+ +
Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELL 338


>gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
 gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
          Length = 360

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/262 (41%), Positives = 158/262 (60%), Gaps = 8/262 (3%)

Query: 96  KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           KLE   ++  +LL  +   D  + +LE+ AG GG E+  +A+ LLRMY R+ E+R ++TE
Sbjct: 90  KLERLDRELHTLLLPTDPNDKRNIFLEIRAGTGGDEAALFASDLLRMYLRYVEQRGWRTE 149

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +    GE  G K   + I G  AY  LK E G HR+ R+   +S  R HTS  ++ + P
Sbjct: 150 IMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQRVPQTESQGRIHTSACTVAIMP 209

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             ++  EI+I+ +D R+DT+RASGAGGQHVN TDSA+RITH+P+G+VV+CQ ERSQHKN+
Sbjct: 210 EAEEIDEIDINPADLRVDTFRASGAGGQHVNKTDSAIRITHLPSGIVVECQDERSQHKNR 269

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           A+A ++LR KL   E +K         + ++ IG G    +IR+Y   P   V D R N+
Sbjct: 270 ARAMSLLRTKLKLEEEEKLVAEETA--TRRSLIGSGDRSERIRTYNF-PQGRVTDHRINL 326

Query: 331 EKTSPSDVLDGDLDDFMKATLA 352
                 ++L G+LD  +   +A
Sbjct: 327 TLYKLDEILQGNLDAIIDLLVA 348


>gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
 gi|225207415|gb|EEG89769.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
          Length = 358

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 149/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RMY  +A+ R++KTE + +++    G K    +I
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKEVVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E GVHR+ R+   +S  R HTS  ++ V P  ++ +++ I E D RID 
Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K+
Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                  E+ +++IG G    +IR+Y   P   V D R  +       +++GDLD+ + +
Sbjct: 285 HSAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDLDEVIDS 341

Query: 350 TLA 352
            +A
Sbjct: 342 LIA 344


>gi|304373116|ref|YP_003856325.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309307|gb|ADM21787.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
          Length = 361

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 180/346 (52%), Gaps = 27/346 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++   L+ +  DP +  N+ E   + +E   +++ +   K           L ++++ ED
Sbjct: 14  EKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNY---------LKQVSIIED 64

Query: 81  DCSILQETS---DNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGT 128
              +LQE      NL + ++ +  K+ E          L   E D  +  +E+   AGG 
Sbjct: 65  SKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L +MY +WAE +K+  + L        G      L+ G   Y  LK E GVH
Sbjct: 125 EANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   ++  R HTS +++ + P VDD I+++I   D RIDTYR+SGAGGQ VNTTDS
Sbjct: 185 RVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+V   Q  RSQ  NK  A  +L++K+Y LE++K++ I   G+  K     
Sbjct: 245 AVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIE--GQFRKLAGSG 302

Query: 309 GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            R  +IR+Y   P   V D R +   TS  +V+ G+LD  + A LA
Sbjct: 303 ARSEKIRTYNY-PQDRVTDHRISFS-TSLKNVIVGNLDPIIDALLA 346


>gi|329943005|ref|ZP_08291779.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|332287587|ref|YP_004422488.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|313848161|emb|CBY17162.1| peptide chain release factor 1 [Chlamydophila psittaci RD1]
 gi|325506915|gb|ADZ18553.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|328814552|gb|EGF84542.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|328914838|gb|AEB55671.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
          Length = 361

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/345 (35%), Positives = 187/345 (54%), Gaps = 19/345 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL----EL 75
           ++RL  +  K  +P ++ N  E  +L +E   L    S +K   DR+     +L    + 
Sbjct: 9   LKRLEEVEAKISNPEIFDNPKEYSLLSKEHARL----SELKNTYDRVVAQEKILSDDKQA 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131
             +E D  ++    + +Q  K EV+  YK  E+LL      +D    +E+ AG GG E+ 
Sbjct: 65  LAQEKDPEMIAMLEEGIQSGKAEVDKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +    +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ 
Sbjct: 125 LFVGDCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   ++  R HTS  ++ V P   ++  E+ I E D +IDT+RASGAGGQHVN TDSAV
Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAENDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S+  ++G G 
Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSA--QVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y     + V D R  +   S   V++GDLD    A ++
Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYSLDKVMEGDLDTITSALVS 346


>gi|294055591|ref|YP_003549249.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614924|gb|ADE55079.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
          Length = 362

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/336 (35%), Positives = 187/336 (55%), Gaps = 13/336 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDN-LILLELAL 77
           +L+ L+ +  DP+ + +   A  + RE Q +   I   +     Q ++ +N  ++ + ++
Sbjct: 13  KLADLDAQMADPNFYSDQRRAAEVSREHQRVSGLIERFEAFHSAQTQIVENEAMMADSSV 72

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136
           EE+   +  E  + L+     +E     +++  +A DS ++ +E+  GAGG E+  +A  
Sbjct: 73  EEELREMAAEEVEELKGQIETLEKDVLRAMVPPDATDSRNSVMEIRGGAGGDEANIFAGD 132

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMYTR+AE + ++ E +     E  G +     I G +AY  LK E GVHR+ R+   
Sbjct: 133 LYRMYTRYAEAKGWRVEVMSTSPAETGGYREIIFNISGEDAYKHLKFESGVHRVQRVPVT 192

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P  ++ ++IEI+  D  I T RASGAGGQHVNTTDSAV + H P
Sbjct: 193 ETQGRIHTSTATVAVLPEAEE-VDIEINPQDLEISTMRASGAGGQHVNTTDSAVMMVHKP 251

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TGV V C  ERSQ KN+A+A  ++R++L  L+ +  EE A      K +IG G    +IR
Sbjct: 252 TGVTVYCADERSQIKNRAKALTVMRSRL--LQAKVDEENAKYAAERKGQIGTGDRSERIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   + D R  +  + PS V+DG LDD + A
Sbjct: 310 TYNY-PQGRLTDHRIGMNLSLPS-VIDGALDDLIDA 343


>gi|294010049|ref|YP_003543509.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
 gi|292673379|dbj|BAI94897.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
          Length = 363

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 152/245 (62%), Gaps = 8/245 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+ AG GG E+  +A  L RMY R+A+ + +K E +  +  E  G K     
Sbjct: 109 ADARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVAS 168

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I++SD +ID
Sbjct: 169 VTGTGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEE-VDVQIADSDLKID 227

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVNTTDSAVRITH+P+G+VV  Q ERSQHKNKA+A  +LRA++YE E ++
Sbjct: 228 IYRASGAGGQHVNTTDSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEAE-RE 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           R +    G + K  +G G    +IR+Y   P   V D R N+      ++L+G  L + +
Sbjct: 287 RAQSEQAG-ARKAMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVI 344

Query: 348 KATLA 352
            A +A
Sbjct: 345 DALVA 349


>gi|150388171|ref|YP_001318220.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
 gi|166977357|sp|A6TK43|RF1_ALKMQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149948033|gb|ABR46561.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
          Length = 357

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 190/357 (53%), Gaps = 40/357 (11%)

Query: 22  RLSFLNTKTED-------PHL------WQNVIEAK-------MLMRERQHLDNAISFIKE 61
           +L+FL  K ED       P +      WQ +I+         M  RE +    A+   KE
Sbjct: 4   KLAFLQEKYEDLGEKISDPEIINDQVQWQKLIKEHSEIEPIVMKYREYKTTQQALGETKE 63

Query: 62  IQDRLCDNLILLELA---LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           I      +  L E+A   +EE + SI+ E  + L+ + L  +            D  +  
Sbjct: 64  IMHDKATDAELKEMAKMEVEELEESIV-EMEEQLKVMLLPTDPN----------DDKNVI 112

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+  GAGG E+  +A +L RMYTR+AE+  +K E + +++    G K    +IKG  AY
Sbjct: 113 VEIRGGAGGDEAGLFAAVLFRMYTRYAERSGWKVEMMSLNESGVGGYKEVIFMIKGKGAY 172

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E G HR+ RI   +S  R HTS +++ + P  +D  E+ I  ++ RID +R+SG 
Sbjct: 173 SQLKYESGAHRVQRIPTTESGGRIHTSTATVVIMPEAEDVGEVNIDTNELRIDVFRSSGN 232

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV CQ  +SQ KNK +A  +L+++L +  +Q  E+ A I
Sbjct: 233 GGQSVNTTDSAVRITHLPTGLVVSCQDGKSQLKNKEKAMKVLKSRLLDQMIQ--EQDAEI 290

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +  ++++G G    +IR+Y   P   V D R N+        LDG++++ + + + 
Sbjct: 291 SQDRRSKVGTGDRSERIRTYNF-PQGRVTDHRINVTVYKLDAFLDGEINEMIDSLIT 346


>gi|258513428|ref|YP_003189650.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777133|gb|ACV61027.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 355

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 154/243 (63%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LEV AG GG E+  +A  L RMYTR+AEK+ ++TE L+ +  +  G K    +I
Sbjct: 106 DDKNVILEVRAGTGGEEAALFAGDLFRMYTRYAEKQGWRTEVLDANYTDIGGFKEVVCMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +EI+I+ +D RID 
Sbjct: 166 EGKGAYSRLKFESGVHRVQRVPSTESGGRIHTSAATVAVLPEAEE-VEIDINPNDLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291
           + ++G GGQ VNTT SAVRITH+P+G+VV CQ E+SQHKNK +A  +LRA+L +L E ++
Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPSGLVVSCQDEKSQHKNKDKAMRVLRARLKDLAESEQ 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R E+A+   + K+ +G G    +IR+Y   P   + D R  +       VL G++D+ ++
Sbjct: 285 RSELAS---TRKSMVGSGDRSERIRTYNF-PQNRITDHRIGLTTHRMPAVLMGEMDEIIE 340

Query: 349 ATL 351
           A +
Sbjct: 341 ALI 343


>gi|229917064|ref|YP_002885710.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
 gi|259585222|sp|C4KYV2|RF1_EXISA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229468493|gb|ACQ70265.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
          Length = 356

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/264 (40%), Positives = 155/264 (58%), Gaps = 13/264 (4%)

Query: 97  LEVEYKQFES---LLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           LE E K+ E+   +L    D ND     +EV   AGG E+  +A  L +MYTR+AE++ +
Sbjct: 85  LEPEVKELEAKLRILLLPKDPNDEKNVIVEVRGAAGGDEAALFAGDLYKMYTRFAERQNW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E ++ +  E  G K  T +I G  AY  LK E G HR+ R+   +S  R HTS +++ 
Sbjct: 145 KVELIDANYTELGGFKEVTFMINGAGAYSKLKFENGAHRVQRVPSTESGGRIHTSTATVA 204

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P  +D +E+ I   D R+DT+ +SG GGQ VNTT SAVR+THIP+G+VV CQ E+SQH
Sbjct: 205 VLPEAED-VEVHIDMKDVRVDTFTSSGPGGQSVNTTQSAVRLTHIPSGLVVSCQDEKSQH 263

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
           KNK +A  +LRA+LY+ ++Q  E +  +    K+ +G G    +IR+Y   P   V D R
Sbjct: 264 KNKDKAMKVLRARLYD-KMQS-EHMEELSAQRKSAVGTGDRSERIRTYNF-PQSRVTDHR 320

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
             +       VL G+L+D + A +
Sbjct: 321 IGLTLQKLDRVLAGELEDIIDALI 344


>gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
 gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
          Length = 357

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/251 (42%), Positives = 150/251 (59%), Gaps = 9/251 (3%)

Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           +LL  +A D     LEV AG GG E+  +A  L RMY R+A ++ +  E L   +G   G
Sbjct: 97  ALLPKDAMDERGVILEVRAGTGGDEAALFAGDLFRMYARYAAEKGWSVELLSESEGTVGG 156

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     + G  AY  LK E GVHR+ R+   +++ R HTS +++ V P  +D ++++I+
Sbjct: 157 YKEVVAAVHGRGAYARLKFESGVHRVQRVPDTETSGRIHTSAATVAVLPEAED-VDVDIN 215

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD RID YRA GAGGQHVN T+SAVRITHIPTG+VV  Q ERSQH+NKA+A  +LR+++
Sbjct: 216 ESDLRIDVYRAQGAGGQHVNKTESAVRITHIPTGMVVAVQDERSQHRNKARAMALLRSRM 275

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            + E QK +  AN     K ++G G    +IR+Y   P   V D R N+      +V+ G
Sbjct: 276 LDEERQKAD--ANRAADRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVMTG 332

Query: 342 D-LDDFMKATL 351
             LD+ +   L
Sbjct: 333 QALDEIIDPLL 343


>gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|61214645|sp|Q748B1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
          Length = 355

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG ES  +A  L RMY+R+AE+ ++K E +   + E  G K    LI
Sbjct: 103 DDRNVILEIRAGTGGDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   +  LK E G HR+ R+   ++  R HTS  ++ V P  +D IE++I+ +D +ID 
Sbjct: 163 EGQGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAED-IEVDINPADLKIDV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITHIPTG+VV+CQ ERSQ KN+A+A  +L+ K+  L+   +
Sbjct: 222 YRASGAGGQHVNKTESAVRITHIPTGIVVECQDERSQIKNRAKAMKVLKTKI--LDGLHQ 279

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A I    K ++G G    +IR+Y   P   + D R  +       +++GD+ + + A
Sbjct: 280 EQNARIAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDSLMEGDIAEVVDA 338


>gi|187251505|ref|YP_001875987.1| peptide chain release factor 1 [Elusimicrobium minutum Pei191]
 gi|186971665|gb|ACC98650.1| Peptide chain release factor [Elusimicrobium minutum Pei191]
          Length = 358

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 153/238 (64%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS   YLE+  GAGG ES  +A  +LR+Y R+A+ + +KTE LE       G K A++ I
Sbjct: 108 DSKSIYLELRPGAGGDESSIFAAEMLRVYQRFADAKGWKTELLEYTPTGLKGCKYASMFI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY WL+ E G HR+ R+   +++ R HTS  ++ + P  ++ ++I+I+ +D  ++T
Sbjct: 168 KGDGAYSWLRDESGTHRVQRVPDTETSGRVHTSTITVAIMPEAEE-VDIQINPADIEMET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA GAGGQ+VN  ++AVR+ H PTGVVV C++ERSQ  N+ +A NMLRAKLY++E +KR
Sbjct: 227 CRAGGAGGQNVNKVETAVRLIHKPTGVVVSCREERSQGANRIKAMNMLRAKLYQMEEEKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +   I ++ K+++G G    +IR+Y   P   V D RT     + +++++G +++ +
Sbjct: 287 NK--EIYDTRKSQVGTGDRSEKIRTYNF-PQSRVTDHRTEKSYHNITEIMEGQIEEIL 341


>gi|254465069|ref|ZP_05078480.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
 gi|206685977|gb|EDZ46459.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
          Length = 351

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/256 (41%), Positives = 149/256 (58%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    ADS  A LE+  G GG E+  +A  LLRMY R+AE + +K + +E    E 
Sbjct: 92  QLALLPKDAADSRPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEGQGWKFDIIEEQMTEL 151

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            GIK     IKG N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I 
Sbjct: 152 GGIKEVVAHIKGDNVFARLKYESGVHRVQRVPATESGGRIHTSAATVAVLPEAED-VDIH 210

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT RASGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+  A  +L+ 
Sbjct: 211 IDANDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLKT 269

Query: 283 KLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LY+LE Q+       +  + +G   ++E     +IR+Y   P   + D R N+      
Sbjct: 270 RLYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLD 323

Query: 337 DVLDGDLDDFMKATLA 352
            V+ GDLD+ + A  A
Sbjct: 324 QVMGGDLDEIIDALTA 339


>gi|163735803|ref|ZP_02143232.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
 gi|161390889|gb|EDQ15229.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
          Length = 351

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/248 (41%), Positives = 150/248 (60%), Gaps = 14/248 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +AD+  A LE+  G GG E+  +A  L RMY R+AE + +K + +E+ + E  GIK    
Sbjct: 100 KADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDVIELQETELGGIKEVVA 159

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I I  +D RI
Sbjct: 160 HIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIHIEANDLRI 218

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+A+LY+LE  
Sbjct: 219 DTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKARLYDLERS 277

Query: 291 KREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           + ++       A +G   ++E     +IR+Y   P   + D R N+       +L GDLD
Sbjct: 278 RVDDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYRLDAILQGDLD 331

Query: 345 DFMKATLA 352
           + + A  A
Sbjct: 332 EIIDALTA 339


>gi|154149107|ref|YP_001407141.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
 gi|166223542|sp|A7I3Q0|RF1_CAMHC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|153805116|gb|ABS52123.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
          Length = 355

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 142/236 (60%), Gaps = 7/236 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  LL  Y R+AE R +KTE +   +G   G K   LL+
Sbjct: 104 DEKNIFLEIRAGTGGDEAALFAGDLLDAYLRYAELRGYKTEIVSQSEGSAGGFKEVILLV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ + P ++DS EI+I+E+D RID 
Sbjct: 164 KGDGAYSRLKFEGGTHRVQRVPETESQGRVHTSAITVAIMPEIEDS-EIQINENDLRIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  +LQ++
Sbjct: 223 MRASGHGGQCVNTTDSAVRITHIPTGLVVTNQDGKSQHKNKEAAMKVLKARLY--DLQEK 280

Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E  A      K ++G G    +IR+Y   P   + D R N+       ++ G L D
Sbjct: 281 ERKAKEQSERKDQVGTGDRSGRIRTYNY-PQNRITDHRINLTLYRLDAIMAGGLFD 335


>gi|89898158|ref|YP_515268.1| peptide chain release factor 1 [Chlamydophila felis Fe/C-56]
 gi|119361521|sp|Q255B5|RF1_CHLFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89331530|dbj|BAE81123.1| peptide chain release factor RF-1 [Chlamydophila felis Fe/C-56]
          Length = 361

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 19/345 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL---ELA 76
           ++RL  +  K  DP ++ N  E   L RE   L    + +K + D++  +  +L   + A
Sbjct: 9   LKRLEEVEVKISDPEIFNNPKEYSSLSREHARL----TELKNVYDKVLRHEKILNDDKHA 64

Query: 77  L-EEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131
           L +E D  ++    + +Q  K E+E  YK  E+LL      +D    +E+ AG GG E+ 
Sbjct: 65  LAQEKDPEMIAMLEEGIQSGKSEIEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +    +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ 
Sbjct: 125 LFVGDCVRMYHLYASAKGWKYEELSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   ++  R HTS  ++ V P   +D  E+ + E D +IDT+RASGAGGQHVN TDSAV
Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAEDDEEVFVDEKDLKIDTFRASGAGGQHVNVTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S+  ++G G 
Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSA--QVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y     + V D R  +   +   V++GDLD    A ++
Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYNLDKVMEGDLDTITSALVS 346


>gi|227823188|ref|YP_002827160.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
 gi|227342189|gb|ACP26407.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
          Length = 352

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 151/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A  + ++ E L   +GE  G K     
Sbjct: 99  ADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAAKGWRVEVLSASEGEAGGYKEIIAT 158

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +++ R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 159 VSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 217

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A+A  +LR++L+++E Q+
Sbjct: 218 TMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAKAMQVLRSRLFDMERQR 276

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   + D R N+       +++G++D+ + 
Sbjct: 277 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDEVVD 333

Query: 349 ATLA 352
           A LA
Sbjct: 334 ALLA 337


>gi|320529373|ref|ZP_08030461.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
 gi|320138339|gb|EFW30233.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
          Length = 354

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +A  L RMY R+AE++ ++TE L  ++ E  G K  + L+
Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   +S  R HTS  ++ V P  +D +E+ I  +D RIDT
Sbjct: 165 TGAGAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAED-VEVTIDPNDLRIDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQ+VN T++A+RITH+PTG+VVQCQ E+SQ KNK +A  +LRA++Y+   Q  
Sbjct: 224 YCASGAGGQYVNRTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQ-- 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    ++++G G    +IR+Y   P   V D R  +       VLDG+L++ + A
Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAA 340

Query: 350 TL 351
            +
Sbjct: 341 LI 342


>gi|228994048|ref|ZP_04153949.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
 gi|229000115|ref|ZP_04159685.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|229007635|ref|ZP_04165229.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228753646|gb|EEM03090.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228759652|gb|EEM08628.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|228765696|gb|EEM14349.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
          Length = 358

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDSNKLREYSKEQSDMQETVEVYREYKDVRAQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ D   +++E    L+    E E  +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEEKLDADMREMVKEEVSELE--GQEKELSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|291550093|emb|CBL26355.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           torques L2-14]
          Length = 356

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RMY  +A+ R++KTE + +++    G K    +I
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E GVHR+ R+   +S  R HTS  ++ V P  ++ +++ I E D RID 
Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K+
Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKK 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A+     +++IG G    +IR+Y   P   V D R  +       +L+GDLD+ + +
Sbjct: 285 Q--ASEAAERRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDS 341

Query: 350 TLA 352
            +A
Sbjct: 342 LIA 344


>gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 356

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 191/347 (55%), Gaps = 27/347 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQD-----RLCDNL 70
           ++R   ++T   DP++  ++     L +E+  L+  +    +++  +Q       L D+ 
Sbjct: 10  IKRYDEISTLLVDPNILNDIKRITELSKEQSDLEELVEKARAYLNNLQSIEENKALLDDK 69

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129
            L +LA EE     ++ET    Q +KLE E K    LL  +  D  + YLE+ AG GG E
Sbjct: 70  ELGDLAKEE-----IKETE--TQNVKLEAEIKVL--LLPKDPNDDKNIYLELRAGTGGDE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   L R Y R+A+ + +K E +   +    G K    L+KG  AY  LK E G HR
Sbjct: 121 AGIFVGDLFRAYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGGTHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ + P VDD +E+ I+ +D RI+ +RA G GGQ VNTTDSA
Sbjct: 181 VQRVPATESQGRVHTSAITVAIMPEVDD-VEVVINPNDLRIEVFRAGGHGGQCVNTTDSA 239

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNK +A  +L+A++YE EL+ + E     E+ K+++G G
Sbjct: 240 VRITHIPTGISVSMQDEKSQHKNKDKAMKILKARIYEAELEAQME--QNAEARKSQVGSG 297

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
               +IR+Y   P   + D R  +   S  ++ L G+LD  +   +A
Sbjct: 298 DRSERIRTYNY-PQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVA 343


>gi|313896150|ref|ZP_07829704.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312975575|gb|EFR41036.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 354

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +A  L RMY R+AE++ ++TE L  ++ E  G K  + L+
Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   +S  R HTS  ++ V P  +D +E+ I  +D RIDT
Sbjct: 165 TGAGAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAED-VEVTIDPNDLRIDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQ+VN T++A+RITH+PTG+VVQCQ E+SQ KNK +A  +LRA++Y+   Q  
Sbjct: 224 YCASGAGGQYVNRTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQ-- 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    ++++G G    +IR+Y   P   V D R  +       VLDG+L++ + A
Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAA 340

Query: 350 TL 351
            +
Sbjct: 341 LI 342


>gi|163746457|ref|ZP_02153815.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
 gi|161380342|gb|EDQ04753.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
          Length = 351

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 14/247 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+  G GG E+  +A  LLRMY R+AE R +  + +E    E  G+K     
Sbjct: 101 ADAKPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWGFDLIESQMTELGGVKEVVAH 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G N +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++IEI+ +D RID
Sbjct: 161 ITGQNVFARLKFESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIEINANDLRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITHIPTG+VV    E+SQH+N+ +A  +L+A+LY++E  +
Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHRNRDKAMQVLKARLYDMERGR 278

Query: 292 ------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
                  +  A +G   ++E     +IR+Y   P   + D R N+       V+ GDLD+
Sbjct: 279 IDSERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYRLEAVMQGDLDE 332

Query: 346 FMKATLA 352
            + A  A
Sbjct: 333 IIDALTA 339


>gi|116254019|ref|YP_769857.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|119361588|sp|Q1MBB2|RF1_RHIL3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115258667|emb|CAK09771.1| putative peptide chain release factor 1 [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 359

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ITGKGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++++ + 
Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALMA 345


>gi|254509155|ref|ZP_05121254.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
 gi|219547906|gb|EED24932.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
          Length = 362

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 183/322 (56%), Gaps = 17/322 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  +       
Sbjct: 25  DPDIIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMAKEDDEEMREMAQEE 83

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++E  + ++R+  E+   Q   L     D  + +LE+ AGAGG E+  +A  L RMY+++
Sbjct: 84  IKEAKETIERLTDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKF 140

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R+   +S  R HT
Sbjct: 141 AEKQGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ
Sbjct: 201 SACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
            ERSQHKNKA+A  +L A++  ++ ++ +  A   ++ +  +G G    +IR+Y   P  
Sbjct: 261 DERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQG 317

Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343
            V D R N+     ++V++GDL
Sbjct: 318 RVSDHRINLTIYRLNEVMEGDL 339


>gi|239628684|ref|ZP_04671715.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518830|gb|EEQ58696.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 357

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/329 (35%), Positives = 193/329 (58%), Gaps = 13/329 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-QE 87
           DP + Q+      LM+E+  L     A    K+ +  + D+L LLE   +E+   +  +E
Sbjct: 21  DPAVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVEDSLALLEEENDEEMREMAKEE 80

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
            SD  +RI+ E+E++    LL  +  D  +  LE+ AGAGG E+  +A  L RMY+ +A+
Sbjct: 81  LSDAKKRIE-ELEHELKILLLPKDPNDDKNIILEIRAGAGGDEAALFAAELYRMYSNYAD 139

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
             ++K E + +++    G K    ++ G  AY  LK E GVHR+ R+   +S  R HTS 
Sbjct: 140 SHRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGVHRVQRVPETESGGRIHTST 199

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P  ++ ++++I  +D RID  RASG GGQ VNTTDSAVR+TH+PTG+V+  Q E
Sbjct: 200 ATVAVMPEAEE-VDVQIDMNDIRIDVMRASGNGGQCVNTTDSAVRLTHMPTGIVIYSQTE 258

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           +SQ +NK +A+ +LR+KLY++EL+KR+  ++  E  +++IG G    +IR+Y   P   V
Sbjct: 259 KSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIGTGDRSEKIRTYNF-PQGRV 315

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            D R  +       +++GD+ + +   +A
Sbjct: 316 TDHRIKLTLYKIDSIMNGDIQELLDNLIA 344


>gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
 gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
          Length = 359

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 182/345 (52%), Gaps = 21/345 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +   + L  +  DP L  +   A+ + +    L   +S   ++     D     ELA
Sbjct: 11  DDILAEHAGLEAQMSDPALHNDPAAARRVGKRFSELSPIMSTYNKLTAAQDDLEAARELA 70

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA------DSNDAYLEVHAGAGGTES 130
              DD S   E  D      LE E  Q E  L+ +       D +D  LEV +G GG ES
Sbjct: 71  A--DDSSFAAEIPD------LEAEVAQLEQTLTDQLAPRDPHDGDDIVLEVKSGEGGEES 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----PNA-YGWLKGEQ 185
             +A+ L RMY R+AE+  ++ E L+    +  G K ATL IK     P+  +  LK E 
Sbjct: 123 ALFASDLARMYVRYAERHGWRVEILDATVSDLGGYKEATLSIKSKSDTPDGVWARLKFEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + VYP  ++  +++I ESD RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNT 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  +  +  +  A+ G  S+  
Sbjct: 243 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQVVAEEAADAEASAGRQSQVR 302

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +    +IR+Y   P   + D R   +  +   VLDG+LD  + A
Sbjct: 303 TVDRSERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDA 346


>gi|87198313|ref|YP_495570.1| peptide chain release factor 1 [Novosphingobium aromaticivorans DSM
           12444]
 gi|119361571|sp|Q2GBN7|RF1_NOVAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|87133994|gb|ABD24736.1| bacterial peptide chain release factor 1 (bRF-1) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 354

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/281 (38%), Positives = 166/281 (59%), Gaps = 12/281 (4%)

Query: 80  DDCSILQETSDNLQRIKLEV---EYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + L RI+ E+   E++   ++L  + AD+  A LE+ AG GG E+  +A 
Sbjct: 66  DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGTGGDEAALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY R+A ++ ++ E + ++  +  G K     + G   +  LK E GVHR+ R+  
Sbjct: 126 DLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQGVFAKLKFESGVHRVQRVPV 185

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P  D+ +++ I + D +ID YRASGAGGQHVNTTDSAVRITH+
Sbjct: 186 TESGGRIHTSAATVAVLPEPDE-VDVAIEDKDLKIDIYRASGAGGQHVNTTDSAVRITHL 244

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+G+VV CQ ERSQHKNKA+A  +LR +LY  ++++        E+ K  +G G    +I
Sbjct: 245 PSGLVVTCQDERSQHKNKAKAMQVLRTRLY--DMRREAAQGAEAEARKAMVGSGDRSERI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           R+Y   P   V D R N+      ++L+G  L + + A +A
Sbjct: 303 RTYNF-PQGRVTDHRINLTLHRLPEILEGPGLAELIDALIA 342


>gi|90416952|ref|ZP_01224881.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
 gi|90331299|gb|EAS46543.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
          Length = 360

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 146/239 (61%), Gaps = 8/239 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + +LE+ AG GG E+  ++  L RMY+++AE  ++K E +  + G+  G K     I
Sbjct: 109 DSKNVFLEIRAGTGGDEAAIFSGDLFRMYSKYAETNRWKVEIISENSGDHGGYKEVIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ +    D+   IEI++ D R+DT
Sbjct: 169 VGQGVYSKLKFESGAHRVQRVPDTESQGRVHTSACTVAIMAEADEQDAIEINKGDLRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG+GGQHVN TDSA+R+TH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L  ++    
Sbjct: 229 FRASGSGGQHVNKTDSAIRLTHLPSGLVVECQDERSQHKNRAKAMSVLQARLTAMQ---D 285

Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E +A    +  K  +G G    +IR+Y   P   V D R N+      +V++G LDD +
Sbjct: 286 EAVAKEQSDQRKNLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLGEVMEGSLDDVL 343


>gi|66769665|ref|YP_244427.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|81304380|sp|Q4URB6|RF1_XANC8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|66574997|gb|AAY50407.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 361

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E      GE  G K     +
Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
              A   ++ K ++G G   ++IR+Y   P   + D R   +      ++++GDLD  + 
Sbjct: 286 -AAAAKAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343

Query: 349 ATL 351
             L
Sbjct: 344 RLL 346


>gi|296127053|ref|YP_003634305.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
 gi|296018869|gb|ADG72106.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
          Length = 358

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 140/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG ES  +   L RMY+R+ E+   K E ++    E  G K     +
Sbjct: 108 DGKNIIIEIRVGTGGDESALFVGDLFRMYSRFIERANLKMEIIDTSPTELGGYKEVIFSV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NAY  LK E G HR+ RI   +S  R HTS S++ V P   +S ++ I + D R+D 
Sbjct: 168 SGKNAYRALKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMES-DVVIKDEDIRVDI 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVRITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  +R
Sbjct: 227 FRSSGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A   +  + +IG G    +IR+Y   P   V D R N+        +DG++ +   A
Sbjct: 287 K--AKEAKERREQIGSGDRSERIRTYNF-PQNRVTDHRINLTLYKLDRFMDGEITEITDA 343


>gi|332971801|gb|EGK10749.1| peptide chain release factor RF1 [Desmospora sp. 8437]
          Length = 358

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/339 (35%), Positives = 184/339 (54%), Gaps = 17/339 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELAL 77
           QR   LN    +P +  N    +   +E+  L+   +A    KE+ D+  +  I+LE   
Sbjct: 13  QRYEELNQLLSNPEVIHNADLLRKYSKEQSDLEPKYHAYCEYKEVADQYEEARIMLE--- 69

Query: 78  EEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EE D  +L      L+    R K   E  +   L     D  +  +E+   AGG E+  +
Sbjct: 70  EESDPEMLDLVKTELEQLSDRKKALEEEIRLLLLPKDPNDDKNVIVEIRGAAGGEEAALF 129

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+ E+  +K+E L+ +     G K     ++G  AY  LK E G HR+ R+
Sbjct: 130 AADLYRMYTRYGERMGWKSEILDTNTTGLGGFKEVVFSVQGQGAYSRLKYESGAHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P  ++ +++EI + D RIDT+ +SG GGQ VNTT SAVRIT
Sbjct: 190 PTTESGGRIHTSTATVAVLPEAEE-VDVEIQDKDLRIDTFCSSGPGGQSVNTTKSAVRIT 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ E+SQ KNK +A  +LRA+L  L+ +++EE A + ++ K ++G G    
Sbjct: 249 HLPTGIVVSCQDEKSQIKNKEKAMRVLRARL--LDQKQQEEEAKMADARKVQVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   V D R  +       V+DGDLD+ + A
Sbjct: 307 RIRTYNF-PQSRVTDHRIGLTLHKLDLVMDGDLDEIVDA 344


>gi|225621133|ref|YP_002722391.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
 gi|254790865|sp|C0QWA1|RF1_BRAHW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225215953|gb|ACN84687.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
          Length = 358

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 140/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG ES  +   L RMYTR+ E+   K E ++    E  G K     +
Sbjct: 108 DGKNIIVEIRVGTGGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G +AY  LK E G HR+ RI   +S  R HTS S++ V P   +S ++ I + D R+D 
Sbjct: 168 SGKDAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMES-DVVIKDEDIRVDI 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVRITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  +R
Sbjct: 227 FRSSGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A   +  + +IG G    +IR+Y   P   V D R N+        +DG++ +   A
Sbjct: 287 K--AKEAKERREQIGSGDRSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDA 343


>gi|229816317|ref|ZP_04446624.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
 gi|229808073|gb|EEP43868.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
          Length = 355

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 184/331 (55%), Gaps = 15/331 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDC 82
           L  K  DP +  ++ E   L +E  H  + +   +E    L D  +  E+   A++ D+ 
Sbjct: 15  LEKKLSDPAVASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIDVAKEMLHDAVDADEK 74

Query: 83  SILQ-ETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139
            +LQ E S+N  ++ +LE + K    L+ G+  D  D  +E+ + AGG E+  +A  L +
Sbjct: 75  EMLQMEISENEAKLPQLEEDIKIM--LIPGDPMDEKDTIVEIRSAAGGDEAAIFAGDLFK 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E +K+K   L+    E  G KS    ++G   Y  +K E GVHR+ R+   +S 
Sbjct: 133 MYQRFIESKKWKMTVLDSSPSEAGGFKSIEFKVEGDKVYSVMKYESGVHRVQRVPKTESQ 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R  TS +++ V P  D+ I+I+I+++D R+DTY ASG GGQ VNTT SAVRITH+PT  
Sbjct: 193 GRIQTSTATVAVLPEADE-IDIQINQADLRVDTYCASGPGGQCVNTTYSAVRITHLPTNT 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VVQ Q++RSQ +N+     MLRA+LYE+EL+K++  A +G     +IG G    +IR+Y 
Sbjct: 252 VVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERSAQIGHGNRSEKIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           L P   V D R     T    +L   L D +
Sbjct: 310 L-PQDRVTDHRIGFNSTYNGVLLGDQLSDVI 339


>gi|194364499|ref|YP_002027109.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693440|sp|B4SKS8|RF1_STRM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194347303|gb|ACF50426.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
          Length = 360

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E    + GE  G K     +
Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+  LK E G HR+ R+   +S  R HTS +++ + P  D+  +I I+ +D R+DT
Sbjct: 167 VGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINPADLRVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH N+ +A   L+A+L + E Q++
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLLDAERQRQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
           +  A   ES + ++G G   ++IR+Y   P   + D R   +      ++L GDLD  ++
Sbjct: 287 D--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILAGDLDPLLQ 343


>gi|292669720|ref|ZP_06603146.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
 gi|292648517|gb|EFF66489.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
          Length = 354

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +A  L RMY R+AE++ ++TE L  +  E  G K  + L+
Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEILSSNPTEIGGFKEISFLV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   +S  R HTS  ++ V P  +D +E+ I  +D RIDT
Sbjct: 165 NGAGAYSRLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAED-VEVTIDPNDLRIDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQ+VN T++A+RITHIP+G+VVQCQ E+SQ KN+ +A  +LRA+LY+   + R
Sbjct: 224 YCASGAGGQYVNRTETAIRITHIPSGIVVQCQDEKSQLKNREKAMKVLRARLYD---RAR 280

Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +E A+ +    ++++G G    +IR+Y   P   V D R  +       VLDG+LD+ + 
Sbjct: 281 QEQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELDEILA 339

Query: 349 ATL 351
             +
Sbjct: 340 GLI 342


>gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
 gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
          Length = 358

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 164/279 (58%), Gaps = 11/279 (3%)

Query: 80  DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWAN 135
           +D  +     + +Q ++  +E Y++  +LL    D ND     +E+ AGAGG E+  +A 
Sbjct: 72  EDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRDPNDEKNIIMEIRAGAGGDEAALFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMYTR+AE++ +K E ++       G K    ++ G + Y  +K E GVHR+ R+  
Sbjct: 132 DLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVFMVSGTDVYSHMKFESGVHRVQRVPD 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P   + ++IE++ +D R+DTYRA GAGGQ+VN T+SAVR+THI
Sbjct: 192 TESQGRVHTSTVTVAVMPEAQE-VDIELNPADIRVDTYRAGGAGGQYVNKTESAVRMTHI 250

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V QCQ E+SQ KN+ +   +LR+++ E E +K+   A      K+++G G    +I
Sbjct: 251 PTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEKQR--AATAAERKSQVGTGDRSERI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R  +      D+++GDLD+ + A +
Sbjct: 309 RTYNY-PQGRVTDHRIGLTLHKLPDIINGDLDELLDALM 346


>gi|331002270|ref|ZP_08325789.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411364|gb|EGG90780.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 355

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/291 (37%), Positives = 168/291 (57%), Gaps = 19/291 (6%)

Query: 77  LEEDDCSILQETSDNLQRIKLE--VEYKQFESLLSGE-------ADSNDA---YLEVHAG 124
           L+ED   +L+   D ++ +  E   E K+ E  LS +        D ND     LE+ AG
Sbjct: 57  LQEDALEMLEMNDDEMKEMAKEELAEGKRLEEELSEKLKILLLPKDPNDEKNIMLEIRAG 116

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY  +AE + +K E +++++    G K    ++ G  AY  LK E
Sbjct: 117 AGGDEAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYE 176

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +S+ V P  ++ ++++I  +D RID  RASG GGQ VN
Sbjct: 177 SGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-VDVQIDMNDVRIDVMRASGNGGQCVN 235

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYE+EL+K++         ++
Sbjct: 236 TTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQSAE--AADRRS 293

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   V D R N+       +++GD+ + +   +A
Sbjct: 294 QIGTGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIA 343


>gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
 gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
          Length = 361

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 190/350 (54%), Gaps = 17/350 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L + ++     KE+  +L D
Sbjct: 4   IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63

Query: 69  NLILLELALEEDDCS--ILQETSD-NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG 124
           +  +L   +++ D    +  E SD   Q+ KLE + K    LL  +  D  +  +E+H  
Sbjct: 64  DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVM--LLPKDPNDEKNIIMEIHGA 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK E
Sbjct: 122 AGGDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  +D ++I+I   D R+D YR+SGAGGQH+N
Sbjct: 182 NGAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHIN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+ ++  N     K+
Sbjct: 241 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNA--ERKS 298

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IG G    +IR+Y   P   V D R  +       +++G+LDD + A +
Sbjct: 299 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALI 347


>gi|238927406|ref|ZP_04659166.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
 gi|238884688|gb|EEQ48326.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
          Length = 354

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 144/238 (60%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +A  L RMY R+AE++ ++TE L  +  E  G K  T L+
Sbjct: 105 DEKNVIVEIRGGVGGEEAALFAASLFRMYVRYAERQGWRTEVLSSNPTEIGGFKEITFLV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   +S  R HTS  ++ V P  ++ +E+ I  +D RIDT
Sbjct: 165 SGTAAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEE-VEVTIDPNDLRIDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQ+VN T++A+RITHIPTG+VVQCQ E+SQ KN+ +A  +LRA+LY+   Q  
Sbjct: 224 YCASGAGGQYVNRTETAIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQ-- 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E+   +    ++++G G    +IR+Y   P   V D R  +       V+DG+LD+ +
Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELL 338


>gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 357

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 190/350 (54%), Gaps = 17/350 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L + ++     KE+  +L D
Sbjct: 4   IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63

Query: 69  NLILLELALEEDDCS--ILQETSD-NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG 124
           +  +L   +++ D    +  E SD   Q+ KLE + K    LL  +  D  +  +E+H  
Sbjct: 64  DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVM--LLPKDPNDEKNIIMEIHGA 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK E
Sbjct: 122 AGGDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  +D ++I+I   D R+D YR+SGAGGQH+N
Sbjct: 182 NGAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHIN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+ ++  N     K+
Sbjct: 241 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNA--ERKS 298

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IG G    +IR+Y   P   V D R  +       +++G+LDD + A +
Sbjct: 299 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALI 347


>gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21]
 gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21]
          Length = 359

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 177/323 (54%), Gaps = 20/323 (6%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  E + L +E   L   ++  +E +  L D     EL  E D     QE  + 
Sbjct: 23  DPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPD-----QEMREM 77

Query: 92  LQRIKLEVEYKQFE-----SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143
            Q   L +E ++ E      LL    D ND     LE+ AG GG ES  +A  L RMY+R
Sbjct: 78  AQAELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSR 137

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +AE  +++ E +   + E+ G K    L++G   +  LK E G HR+ R+   ++  R H
Sbjct: 138 FAETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIH 197

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ V P  +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV C
Sbjct: 198 TSACTVAVMPEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVAC 256

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q+ERSQ KN+A+A  +L++++ +  L   E+ A +    K+++G G    +IR+Y   P 
Sbjct: 257 QEERSQIKNRAKAMKVLKSRILDNILM--EQNAKLAADRKSQVGSGDRSERIRTYNF-PQ 313

Query: 321 QMVKDLRTNIEKTSPSDVLDGDL 343
             + D R  +       ++ GD+
Sbjct: 314 GRMTDHRIGLTLYRLDAIMAGDI 336


>gi|153845428|ref|ZP_01993769.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|149745113|gb|EDM56364.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
          Length = 148

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 88/144 (61%), Positives = 110/144 (76%), Gaps = 1/144 (0%)

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S  +YP +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +R
Sbjct: 2   SALIYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDR 61

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL   + +KDLR
Sbjct: 62  SQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLR 120

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T +E  +   VLDGDLD F++A+L
Sbjct: 121 TGVENRNTQAVLDGDLDKFIEASL 144


>gi|21230341|ref|NP_636258.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|188992877|ref|YP_001904887.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|24418637|sp|Q8PC68|RF1_XANCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576663|sp|B0RUA5|RF1_XANCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21111894|gb|AAM40182.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|167734637|emb|CAP52847.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris]
          Length = 361

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E      GE  G K     +
Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
              A   ++ K ++G G   ++IR+Y   P   + D R   +      ++++GDLD  + 
Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343

Query: 349 ATL 351
             L
Sbjct: 344 RLL 346


>gi|150397700|ref|YP_001328167.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
 gi|166223607|sp|A6UCF2|RF1_SINMW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150029215|gb|ABR61332.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
          Length = 360

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 149/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A  + ++ E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAGKGWRVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +D I+I+I   D R+D
Sbjct: 167 VSGRGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-IDIDIRSEDIRVD 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A+A  +LR++LY++E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHQNRAKAMQVLRSRLYDMERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      + ++G G    +IR+Y   P   + D R N+       V++G++D+ + 
Sbjct: 285 AD--SERSADRRNQVGSGDRSERIRTYNF-PQGRLTDHRINLTIYKLDRVMEGEIDEIVD 341

Query: 349 ATLA 352
           A LA
Sbjct: 342 ALLA 345


>gi|218672481|ref|ZP_03522150.1| peptide chain release factor 1 [Rhizobium etli GR56]
          Length = 352

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKSWKVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++++ + 
Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALMA 345


>gi|313203258|ref|YP_004041915.1| bacterial peptide chain release factor 1 (brf-1) [Paludibacter
           propionicigenes WB4]
 gi|312442574|gb|ADQ78930.1| bacterial peptide chain release factor 1 (bRF-1) [Paludibacter
           propionicigenes WB4]
          Length = 361

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 7/234 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+  G GG E+  +A  L +MYT++ E + ++ E   I +G   G K     +
Sbjct: 111 DNKNAIVEIRGGTGGDEAAIFAGDLFKMYTKYCETKGWRLEITNISEGTAGGYKEIIFTV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +++ V P +++  + E+ ESD R+DT
Sbjct: 171 TGENVYGTLKYESGVHRVQRVPQTETQGRVHTSAATVAVLPEMEE-FDYELKESDVRVDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SA+R+ HIPTG  VQCQ E+SQHKNKA+A N LR++LY +E QK 
Sbjct: 230 FCSSGAGGQSVNTTYSAIRLVHIPTGTTVQCQDEKSQHKNKAKAMNELRSRLYAIEHQKY 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             +  IG   KT +  G    +IR+Y   P   + D R N    + S  + GD+
Sbjct: 290 --LDEIGSKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINFTIYNLSAFMGGDI 340


>gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF4000_37C10]
          Length = 358

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/239 (42%), Positives = 145/239 (60%), Gaps = 7/239 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   EADS +A LE+ AG GG E+  +   L +MY R    +K+  E + +   E  G K
Sbjct: 101 LPKDEADSKNAILEIRAGTGGLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFK 160

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              LLIKG N Y +LK E GVHR+ R+   ++  R HTS +++ V P  ++ I++ I+E 
Sbjct: 161 EVILLIKGTNIYSFLKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEE-IDVNINEK 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKN+A+A  +LR+++Y+
Sbjct: 220 DLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRSRVYD 279

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            E  + ++     +  K +IG G    +IR+Y   P   V D R N+      + L+GD
Sbjct: 280 AE--REKKDKKRSKDRKNQIGSGDRSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335


>gi|225437801|ref|XP_002274067.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 151/248 (60%), Gaps = 14/248 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K E ++I + +  G K A+ 
Sbjct: 130 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASG 189

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   YG LK E G+HR+ R+   + + R HTS  S+ + P  D+ +++++   D RI
Sbjct: 190 AISGSGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADE-VDVQLRNEDLRI 248

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-- 288
           DTYR+ G+GGQH NTT+SAVRITHIP+G+ V  Q ERSQH NKA+A  +L AKLYE+E  
Sbjct: 249 DTYRSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERS 308

Query: 289 -LQK---REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DL 343
            +QK   +  +  IG   ++E     +IR+Y   P   V D R  I   S +DV+ G +L
Sbjct: 309 RIQKDRSKLRMEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENL 362

Query: 344 DDFMKATL 351
           D F+ A L
Sbjct: 363 DVFIDALL 370


>gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
 gi|226739100|sp|B8FEA2|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 355

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 143/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMY+R+AE R +K E L  H     GIK    +I
Sbjct: 105 DDKNVILEIRAGTGGDEAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y   K E G HR+ R+   ++  R HTS  ++ V P  ++ ++I+I  S+ R+D 
Sbjct: 165 TGQGVYSAFKFESGTHRVQRVPVTEAQGRIHTSACTVAVLPEAEE-VDIQIDPSEIRVDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+ GAGGQHVNTTDSAVR+TH+PTGVVV CQ E+SQHKNKA+A  +LRA+L +  +Q  
Sbjct: 224 YRSQGAGGQHVNTTDSAVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQ-- 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A+I    K+++G G    +IR+Y   P   V D R  +       ++ G + + + A
Sbjct: 282 EQNASISAERKSQVGSGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESIMAGQISEIVDA 340


>gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
 gi|189039982|sp|A5CYC3|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
          Length = 349

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 172/301 (57%), Gaps = 13/301 (4%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSND 116
            +KEIQD +     L++   +ED   + Q   D L   K  +E +    LL  +  D  +
Sbjct: 54  VVKEIQDTIA----LMKEEPDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKN 109

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             LE+ AG GG E+  +A  L RMY+R+AE++ ++TE L+ +  +  G K    LI+G  
Sbjct: 110 VILEIRAGTGGEEAALFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKG 169

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            Y  +K E GVHR+ RI   +S  R HTS +++ V P  ++ ++++I   D RID + +S
Sbjct: 170 VYSRMKFESGVHRVQRIPTTESGGRIHTSAATVAVLPEAEE-VDVQIDPDDLRIDVFCSS 228

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTT SAVRITHIPTG+VV  Q E+SQHKNK +A  +LRA+L  L+  ++E   
Sbjct: 229 GHGGQSVNTTQSAVRITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARL--LDRVQQEHQQ 286

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            I  + K+ +G G    +IR+Y   P   V D R  +       VLDGDLD+ +  TL +
Sbjct: 287 KIASTRKSMVGTGDRSERIRTYNF-PQNRVTDHRVGLTLHRLDSVLDGDLDEIID-TLIL 344

Query: 354 K 354
           K
Sbjct: 345 K 345


>gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073]
 gi|119361560|sp|Q2RFW0|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella
           thermoacetica ATCC 39073]
          Length = 356

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 144/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ AGAGG E+  +A  L RMY R+AEK++++TE +  H  E  G K     +
Sbjct: 106 DEKDIIMEIRAGAGGEEAALFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ RI   +S  R HTS +++ V P  ++ +++EI   D R+D 
Sbjct: 166 EGQGVYSRLKFESGVHRVQRIPTTESGGRIHTSTATVAVLPEAEE-VDVEIKPEDLRVDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KNK +A  +LRA+L ++   +R
Sbjct: 225 FCSSGPGGQSVNTTYSAVRITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAER 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E    + E  ++++G G    +IR+Y   P   V D R  +       VL G+LD+ + A
Sbjct: 285 E--GELAEERRSQVGSGDRSERIRTYNF-PQNRVTDHRIGLTLHHLDQVLAGELDEIIDA 341


>gi|241206502|ref|YP_002977598.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860392|gb|ACS58059.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 359

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++++ + 
Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALMA 345


>gi|190893591|ref|YP_001980133.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
 gi|190698870|gb|ACE92955.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
          Length = 351

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L   +GE  G K     
Sbjct: 99  ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 158

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 159 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 217

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 218 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 276

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++++ + 
Sbjct: 277 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 333

Query: 349 ATLA 352
           A +A
Sbjct: 334 ALMA 337


>gi|269114934|ref|YP_003302697.1| Peptide chain release factor 1 [Mycoplasma hominis]
 gi|268322559|emb|CAX37294.1| Peptide chain release factor 1 [Mycoplasma hominis ATCC 23114]
          Length = 359

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 186/343 (54%), Gaps = 24/343 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL--ELALEEDDCS 83
           L  K  DP+++ ++     + +E+  L       K+ Q+   + L  L  E+   E D  
Sbjct: 19  LTEKLNDPNIYNDIKAYTRIAKEKSELQEIYDAFKKYQN--IEELYFLSKEILTNEKDQE 76

Query: 84  ILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           +++    +  + + +++   E  +   L   E D  D  +E+   AGG E+  ++  L +
Sbjct: 77  LIELAKNDIDNQMNQLQEIEEEIKELLLPQDENDKRDVIMEIRGAAGGDEANIFSGDLFK 136

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY ++AE + FK + ++   G   G       IKG   +  LK E+GVHR+ R+   ++ 
Sbjct: 137 MYQKYAEIKGFKIKIIDSTYGAAGGYSQIVFSIKGEKVFSQLKFERGVHRVQRVPATETQ 196

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P VD+ ++IEI   D  ++ +R+SGAGGQ VNTTDSAVRITH PTG+
Sbjct: 197 GRVHTSTATVTVLPEVDEDVKIEIRPEDIEVNVFRSSGAGGQSVNTTDSAVRITHKPTGL 256

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESSKTEIGWGRQI 312
           VV  Q ERSQ +NK  A  +L+++LYELEL+KREE       +A  G+ S+       +I
Sbjct: 257 VVTSQDERSQIQNKETALKVLKSRLYELELRKREEAESGLRKLAGTGDRSE-------KI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   + D R     TS   V++G+LD  ++A +A +K
Sbjct: 310 RTYNY-PQDRITDHRIGF-STSLKVVMEGELDKIIEALIADEK 350


>gi|114766145|ref|ZP_01445149.1| peptide chain release factor 1 [Pelagibaca bermudensis HTCC2601]
 gi|114541605|gb|EAU44647.1| peptide chain release factor 1 [Roseovarius sp. HTCC2601]
          Length = 349

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/256 (41%), Positives = 151/256 (58%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    AD+  A LE+  G GG E+  +A  L RMY R+AE R ++ E +E    E 
Sbjct: 90  QLALLPKDAADARPAMLEIRPGTGGEEAALFAGDLARMYQRYAEARGWRWEVIEEQPTEL 149

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++   + I+G N +  LK E GVHR+ R+   +S  R HTS +++ V P   ++++I+
Sbjct: 150 GGLRELVVRIEGDNVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEA-EAVDID 208

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RIDT RASGAGGQHVNTTDSAVRITHIPTG+VV    E+SQH+N+  A N+LR 
Sbjct: 209 IAAADIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHRNREIAMNVLRT 267

Query: 283 KLYELELQKREEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +L++LE QK  +       A +G   ++E     +IR+Y   P   + D R  +      
Sbjct: 268 RLFDLERQKAADARASDRKAQVGSGDRSE-----RIRTYNF-PQGRMTDHRIGLTLYRLE 321

Query: 337 DVLDGDLDDFMKATLA 352
            +L GDLD+ + A  A
Sbjct: 322 QILAGDLDEIIDALTA 337


>gi|325921457|ref|ZP_08183312.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
 gi|325548004|gb|EGD19003.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
          Length = 361

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 143/239 (59%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E      GE  G K     +
Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347
              A   ++ K ++G G   ++IR+Y   P   + D R   +      ++++GDLD  +
Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALI 342


>gi|196013797|ref|XP_002116759.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
 gi|190580737|gb|EDV20818.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
          Length = 271

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 154/246 (62%), Gaps = 9/246 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD ++A +E+ A  GG E+  +A  L +MY R+A  R +K EAL  H+ E  G K A  
Sbjct: 6   EADDSNAIIEIRAATGGLEAALFAADLFQMYKRYASHRNWKFEALSFHENEVGGFKEAIA 65

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +G +K E GVHR+ R+   +S+ R HTS +++ + P  ++ I+I I+++D + 
Sbjct: 66  SIVGAGVFGEMKLESGVHRVQRVPITESDGRVHTSTATVAILPQPEE-IDIVINKNDIKF 124

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT+RA GAGGQHVNTTDSAVR+THIPTG++V  Q+E+SQH+NKA+A  +L+AKL++ + Q
Sbjct: 125 DTFRAQGAGGQHVNTTDSAVRLTHIPTGMIVAVQEEKSQHRNKAKAIQILQAKLFDEQRQ 184

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
           + +   +   + + +IG G    +IR+Y  Q    + D R N+      D L G+  L+ 
Sbjct: 185 QNQ--TDRVHARRQQIGTGARSERIRTYNYQQ-DRITDHRINMSLYGIDDFLSGNESLNH 241

Query: 346 FMKATL 351
            M + L
Sbjct: 242 LMSSLL 247


>gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
 gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
          Length = 361

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 190/350 (54%), Gaps = 17/350 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L + ++     KE+  +L D
Sbjct: 4   IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63

Query: 69  NLILLELALEEDDCS--ILQETSD-NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG 124
           +  +L   +++ D    +  E SD   Q+ KLE + K    LL  +  D  +  +E+H  
Sbjct: 64  DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVM--LLPKDPNDEKNIIMEIHGA 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK E
Sbjct: 122 AGGDEGSLFAVDLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  +D ++I+I   D R+D YR+SGAGGQH+N
Sbjct: 182 NGAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHIN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+ ++  N     K+
Sbjct: 241 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNA--ERKS 298

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IG G    +IR+Y   P   V D R  +       +++G+LDD + A +
Sbjct: 299 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALI 347


>gi|86742401|ref|YP_482801.1| peptide chain release factor 1 [Frankia sp. CcI3]
 gi|119361540|sp|Q2J6M0|RF1_FRASC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86569263|gb|ABD13072.1| bacterial peptide chain release factor 1 (bRF-1) [Frankia sp. CcI3]
          Length = 357

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 10/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ DA LEV AGAGG ES  +A  LLRMY R+AE+R +KTE L+ +  +  G +  ++ +
Sbjct: 100 DARDAILEVKAGAGGEESALFAGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAV 159

Query: 173 K-----GPN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     GP    YG L+ E GVHR+ R+   +S  R HTS + + V P  ++ +++EI  
Sbjct: 160 KARGPAGPGDGVYGRLRFEGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAEE-VDVEIDP 218

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID +R+SG GGQ VNTTDSAVRITHIPTGVVV CQ E+SQ +NK  A  +LRA+L 
Sbjct: 219 NDLRIDVFRSSGPGGQSVNTTDSAVRITHIPTGVVVSCQNEKSQLQNKESALRILRARLL 278

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +K E  A++  +S+   +    ++R+Y       + D R   +  +   VLDG+LD
Sbjct: 279 GAAREKAESEASLARASQVRTVDRSERVRTYNFA-ENRISDHRVGYKAHNLDQVLDGELD 337

Query: 345 DF 346
           + 
Sbjct: 338 EV 339


>gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1]
 gi|166223608|sp|A5V9C3|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas
           wittichii RW1]
          Length = 360

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/246 (42%), Positives = 148/246 (60%), Gaps = 10/246 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +A  L RMY R+AE R ++ E +     +  G K     
Sbjct: 108 ADERSAMLEIRAGTGGDEAALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVAS 167

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++ I + D RID
Sbjct: 168 VTGAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDVHIDDKDLRID 226

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKNKA+A  +LR +LYE+E   
Sbjct: 227 VYRSSGPGGQSVNTTDSAVRITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEME--- 283

Query: 292 REEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346
           RE +A+    + K+ +G G    +IR+Y   P   V D R N+     S++L+G  LDD 
Sbjct: 284 RERLASERAGARKSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLSEILEGPGLDDL 342

Query: 347 MKATLA 352
           + A +A
Sbjct: 343 VGALIA 348


>gi|325285304|ref|YP_004261094.1| peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
 gi|324320758|gb|ADY28223.1| Peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
          Length = 358

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 142/232 (61%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +EV AG GG E+  +A  L RMYT++ E + +KT  +++ DG   G K     +
Sbjct: 106 DSKNVVVEVRAGTGGDEASIFAGDLFRMYTKYCESKGWKTNVIDLSDGTSGGYKEIQFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P  +D  +++I   D RID 
Sbjct: 166 TGDEVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIDPKDVRIDF 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHVPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYDLELAKK 284

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +E      +S+   G    +IR+Y   P   V D R  +      ++++GD+
Sbjct: 285 QEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDI 335


>gi|294678208|ref|YP_003578823.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
 gi|294477028|gb|ADE86416.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
          Length = 351

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 153/245 (62%), Gaps = 10/245 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+  G GG E+  +A+ L RMY R AEK  ++ E LE    E  G+K A   
Sbjct: 101 ADARPAILEIRPGTGGEEAALFAHDLWRMYERHAEKMGWRFERLEFTATELGGVKEAMAR 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++I+I  +D RID
Sbjct: 161 IEGEGVFARLKYESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-VDIDIPAADIRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+A A  +LRA+LYE+E   
Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHQNRANAMAVLRARLYEIE--- 275

Query: 292 REEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           RE +A    E+ ++++G G    +IR+Y   P   + D R N+   +   +L GDL + +
Sbjct: 276 RERLATERAENRRSQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQILAGDLGEVI 334

Query: 348 KATLA 352
            A +A
Sbjct: 335 DALVA 339


>gi|323249834|gb|EGA33733.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 281

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 86/173 (49%), Positives = 121/173 (69%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIH 279


>gi|310816145|ref|YP_003964109.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
 gi|308754880|gb|ADO42809.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
          Length = 352

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 183/335 (54%), Gaps = 12/335 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R  FL  K +      +  E   L RE   L   +  +   Q    D     E   + D 
Sbjct: 13  RFQFLEAKMQS---GLSGAEIAALGREYSELKPVVDTLARYQALEADLASAEEWLADPDM 69

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +  +E    L+    E E +  ++LL  +A D   A LE+  G GG E+  +A  LLRM
Sbjct: 70  RAFAEEELPRLRTAFAEAEIEMQKALLPRDAADGRPAMLEIRPGTGGDEASLFAADLLRM 129

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R++E + ++ E +E  + E  GIK   + I+G   +  +K E GVHR+ R+   +S  
Sbjct: 130 YQRYSESKGWRFEIIEEAETELGGIKEVVVRIEGEGVFARMKYESGVHRVQRVPETESGG 189

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P  + +++IEI+  D RIDT RASGAGGQHVNTTDSAVRITH+PTG++
Sbjct: 190 RIHTSAATVAVLPEAE-AVDIEINPGDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGII 248

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V   Q +SQH+N+  A ++LRA+LY++E + R + A   +  K ++G G    +IR+Y  
Sbjct: 249 VTSSQ-KSQHRNRELAMDVLRARLYDME-RSRVDGARSAD-RKAQVGSGDRSERIRTYNF 305

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   + D R N+       +L GDLD+ + A +A
Sbjct: 306 -PQGRMTDHRINMTLYRLDQILQGDLDEIVDALVA 339


>gi|326561958|gb|EGE12292.1| peptide chain release factor 1 [Moraxella catarrhalis 103P14B1]
          Length = 319

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 131/209 (62%), Gaps = 8/209 (3%)

Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D ND   A+LE+ AG GG E+  ++  L RMY ++ + + ++ E L  ++GE  G K   
Sbjct: 104 DPNDKATAFLEIRAGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEII 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             + G   YG LK E G HR+ R+   +S  R HTS  ++ V P V+    +EI+ SD R
Sbjct: 164 ARVSGIGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDTYR+SGAGGQHVNTTDSAVRITHIPTGVV +CQQERSQH NK +A  ML A++ + ++
Sbjct: 224 IDTYRSSGAGGQHVNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV 283

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSY 315
           Q   +I    +  +  +G G    +IR+Y
Sbjct: 284 QA--QIDATSDMRRNLVGSGDRSERIRTY 310


>gi|189499090|ref|YP_001958560.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
 gi|189494531|gb|ACE03079.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
          Length = 357

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 151/241 (62%), Gaps = 4/241 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSAT 169
           EADS +  +E+ AG GG E+  +A  LLRMY ++AE++ +K + +E ++    G  K A 
Sbjct: 104 EADSRNVIIEIRAGTGGDEAALFATDLLRMYQKFAERKGWKCDMMEFNEASIPGACKEAI 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           L I G + Y  +K E GVHR+ R+   ++  R HTS +S+ V P  +D ++IEI + D +
Sbjct: 164 LSISGHDVYATMKFESGVHRVQRVPETETQGRIHTSAASVAVLPEAED-VDIEIRKDDLQ 222

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +DT+R+ G GGQ+VN  ++AVRITH P+G+VV CQ+ERSQ +N+ +A  MLRAKLY+ +L
Sbjct: 223 LDTFRSGGKGGQNVNKVETAVRITHTPSGIVVACQEERSQLQNRERAMKMLRAKLYDQQL 282

Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +K  E A++  S  T      +IR+Y   P   V D R      +   +L+G+LDD ++
Sbjct: 283 AEKNRERADLRRSMVTTGDRSAKIRTYNF-PQSRVTDHRIGYTSHALPQILEGNLDDIIE 341

Query: 349 A 349
           A
Sbjct: 342 A 342


>gi|295100871|emb|CBK98416.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii L2-6]
          Length = 361

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 185/339 (54%), Gaps = 15/339 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRE---RQHLDNAISFIKEIQDRLCDNLILLE--L 75
           +R   L+ +   P    +  + + LM+E    Q + +A   +   QD L     LLE   
Sbjct: 13  RRFEELSIRLNQPETAADPAQLRRLMQEYHEAQPVVDAYHALTTAQDHLAQAKALLEGDE 72

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
            L+ D    + QE S+  Q +  E+E      LL  +A D     +E+ AGAGG E+  +
Sbjct: 73  PLDADFKAMVQQELSEKSQDVA-ELENNLKILLLPKDANDEKSVIMEIRAGAGGEEAALF 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ L+RMYT + + R ++ E L +++ E  G K A   + G  AY  LK E GVHR+ R+
Sbjct: 132 AHSLVRMYTMYVQSRGWEMELLNLNETELGGTKEAVFAVNGRGAYNRLKYESGVHRVQRV 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P  ++ ++  +   D RIDT+R+SGAGGQH+N T SA+R+T
Sbjct: 192 PETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKTSSAIRVT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I      ++G G    
Sbjct: 251 HIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINADRAGQVGTGDRSE 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P     D R  +   +   ++DGDLDD + A
Sbjct: 309 KIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGDLDDIIDA 346


>gi|149369846|ref|ZP_01889697.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
 gi|149356337|gb|EDM44893.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
          Length = 358

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 177/302 (58%), Gaps = 13/302 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           LM++R+    A   I E ++ L D  +  ++E+A  + D     E   N+  ++ E+   
Sbjct: 44  LMKKREAYIMATEHIAEAEEILADGSDADMVEMAKMQMD-----EAKSNIAVLEEEI--- 95

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   +     D+ +A +E+ AG GG E+  +A  L RMYT++ E + +KT  ++  +G  
Sbjct: 96  KLMLIPKDPEDAKNAVMEIKAGTGGDEASIFAGDLHRMYTKYCESKGWKTSVVDFSEGTS 155

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K+  + ++G + YG LK E GVHR+ R+   ++  R HTS +++ V+P  ++  ++ 
Sbjct: 156 GGYKAIQMEVEGDDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVH 214

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   D RID + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR+
Sbjct: 215 IEMKDVRIDYFCSSGPGGQSVNTTYSAVRLTHVPTGLVAQCQDQKSQHKNKEKAFKVLRS 274

Query: 283 KLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +LY+LEL K++    +   S+   G    +IR+Y     + V D R N+     S+++DG
Sbjct: 275 RLYDLELAKKQAEDALKRGSQVTSGDRSAKIRTYNYSQGR-VTDHRINLTLYDLSNIIDG 333

Query: 342 DL 343
           D+
Sbjct: 334 DI 335


>gi|254511294|ref|ZP_05123361.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535005|gb|EEE37993.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
          Length = 357

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 167/293 (56%), Gaps = 10/293 (3%)

Query: 65  RLCDNLILLELALEEDDCSIL-QETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVH 122
           +L  +L   E  L + D   L +E    LQ    E E+  Q   L    AD+  A LE+ 
Sbjct: 58  QLVADLAEAEAMLSDPDMKELAEEEIPQLQARIPEAEHALQLALLPRDAADARPAMLEIR 117

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+  +A  LLRMY R+AE R ++ E +E    +  GIK     IKG N +  +K
Sbjct: 118 PGTGGDEAALFAGDLLRMYQRYAEGRGWQFEIIEEQASDLGGIKEVVAHIKGDNVFARMK 177

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS +++ V P  +D ++I+I  +D RIDT R+SGAGGQH
Sbjct: 178 YESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQIDANDIRIDTMRSSGAGGQH 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+P+G+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +   +   +S
Sbjct: 237 VNTTDSAVRITHLPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQRIDSARSADRAS 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             ++G G    +IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 296 --QVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALTA 345


>gi|15639045|ref|NP_218491.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|6093956|sp|O83090|RF1_TREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3322309|gb|AAC65047.1| peptide chain release factor 1 (prfA) [Treponema pallidum subsp.
           pallidum str. Nichols]
          Length = 351

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 27/338 (7%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  + E+P L+ +    +  MR+  +L    S + E  DR     +L E  LE+    I 
Sbjct: 15  LQQEVENPSLFSSTQSYRERMRDHAYL----SRLMEEYDRY----LLTEKQLEDAHVLIQ 66

Query: 86  QETSDNLQRI----------KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            E+  + + +           L    K+ ++LL         +  +E+  G GG E+  +
Sbjct: 67  DESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDSLQEKNIIMEIRGGTGGDEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT +AE ++++ E L + + E  G K  T  I G + YG L+ E GVHR+ R+
Sbjct: 127 AADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +++ R HTS  ++ V P ++++ E++I   D R+D  RASG GGQ VNTTDSAVR+T
Sbjct: 187 PSTEASGRIHTSAVTVAVLPEMEET-EVDIRAEDVRVDVMRASGPGGQCVNTTDSAVRLT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ E+SQ KNKA+A  +LR+++Y+LE  KR ++A   E  K+++G G    
Sbjct: 246 HLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKR-QVARARE-RKSQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   V D R  +       V+ G LDD ++
Sbjct: 304 RIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIE 340


>gi|269837927|ref|YP_003320155.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
 gi|269787190|gb|ACZ39333.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
          Length = 361

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 155/241 (64%), Gaps = 11/241 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L RMY+++AEKR +K + +  ++    G K     +
Sbjct: 108 DEKNVIVEIRAGTGGEEAALFAADLFRMYSQYAEKRGWKIDVMSANETGIGGFKEIIFEV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++I+I+E D RID 
Sbjct: 168 RGRGAYSELKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEAEE-VDIQINEEDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KN+A+A  +LRA+LY+LE Q+R
Sbjct: 227 FRSTGHGGQSVNTTDSAVRITHLPTGLVVTCQDEKSQIKNRAKAMAVLRARLYDLE-QRR 285

Query: 293 --EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             EE + +    ++++G G    +IR+Y   P   V D R  +   +  ++L+G++D F+
Sbjct: 286 LHEERSGM---RRSQVGTGERAEKIRTYNF-PQDRVTDHRLKLSLGNLPEILNGEIDTFI 341

Query: 348 K 348
           +
Sbjct: 342 R 342


>gi|160872697|ref|ZP_02062829.1| peptide chain release factor 1 [Rickettsiella grylli]
 gi|159121496|gb|EDP46834.1| peptide chain release factor 1 [Rickettsiella grylli]
          Length = 363

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ A AGG E+  +A  L RMY+R+AE + +  E +  +  E+ G K     I
Sbjct: 109 DDRNVFLEIRAAAGGDEAAIFAGDLFRMYSRYAESQHWHVEIIHRNPSEQGGYKEIIARI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   ++  R HTS  ++ + P ++   +I +  SD +IDT
Sbjct: 169 SGTKVYAHLKFESGAHRVQRVPETEAQGRVHTSTCTVAILPEIESMDDITLHPSDLKIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHV  TDSA+RITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL  L  QK 
Sbjct: 229 FRASGAGGQHVQKTDSAIRITHLPSGLVVECQDERSQHKNRARAMSLLQAKL--LAAQKA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++     E+ +  +G G    +IR+Y   P   + D R N+     SD+++G L+  +++
Sbjct: 287 KQRREEAETRRDLVGTGDRSERIRTYNF-PQGRLTDHRINLTLYQLSDIMEGHLEPVIQS 345


>gi|329113396|ref|ZP_08242177.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
 gi|326697221|gb|EGE48881.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
          Length = 352

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 148/241 (61%), Gaps = 7/241 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LEV   AGG E+  +A  L  MY R+A+   ++   ++  + E  G++     
Sbjct: 101 ADARSAILEVRPAAGGDEAALFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAE 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   +S  R HTS  ++ V P  +D +++E++E+D R+D
Sbjct: 161 INGKGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAED-VDVEVNETDLRVD 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASGAGGQHVN T+SAVR+TH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LYE E  +
Sbjct: 220 VFRASGAGGQHVNKTESAVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERE--R 277

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  AN     ++++G G    +IR+Y   P   V D R N+       V+ G+LD+F+ 
Sbjct: 278 AQAHANRAADRRSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVD 336

Query: 349 A 349
           A
Sbjct: 337 A 337


>gi|254488030|ref|ZP_05101235.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
 gi|214044899|gb|EEB85537.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
          Length = 371

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/269 (40%), Positives = 154/269 (57%), Gaps = 18/269 (6%)

Query: 94  RIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           R+K E+       Q   L    AD+  A LE+  G GG E+  +A  LLRMY R+AE + 
Sbjct: 99  RLKAEIPKAEASLQLALLPKDAADTKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEAQG 158

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K + +E    E  G+K     IKG N +  LK E GVHR+ R+   +S  R HTS +++
Sbjct: 159 WKFDLIEEQLTELGGVKEVVAHIKGQNVFARLKYESGVHRVQRVPSTESGGRIHTSAATV 218

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D ++I +  +D RIDT R+SGAGGQHVNTTDSAVRITHIPTG+VV    E+SQ
Sbjct: 219 AVLPEAED-VDIHVDPNDLRIDTMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQ 276

Query: 270 HKNKAQAWNMLRAKLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           H+N+  A  +L+A+LY+ E Q+       +  A +G   ++E     +IR+Y   P   +
Sbjct: 277 HRNREIAMQVLKARLYDAERQRVDSERSADRAAQVGSGDRSE-----RIRTYNF-PQGRM 330

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            D R N+       +L GDLD+ + A  A
Sbjct: 331 TDHRINLTLYRLDAILQGDLDEIIDALTA 359


>gi|145348023|ref|XP_001418457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578686|gb|ABO96750.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 373

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/251 (43%), Positives = 155/251 (61%), Gaps = 13/251 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +AD   A LEV AGAGG E+  +A  L RMY   A K  ++ + L + + +  G++ A+ 
Sbjct: 122 DADDRGAILEVRAGAGGDEAALFAAELFRMYALHARKSGWRFDTLNVSETDGKGVREASA 181

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +G LK E GVHR+ R+   ++  R HTS +SI V P  ++ +E++I E D RI
Sbjct: 182 EILGKGVFGRLKFESGVHRVQRVPETETQGRVHTSTASIAVLPHAEE-VEMDIKEEDVRI 240

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTT+SAVR+TH PTG+ V  Q ERSQHKNKA+A+++L+A+LY+LE +
Sbjct: 241 DTMRASGAGGQHVNTTNSAVRLTHAPTGIQVVIQDERSQHKNKAKAFSVLKARLYDLERE 300

Query: 291 K----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           K    R E+ +  IG   ++E     +IR+Y     + VKD R     +  + ++DG L 
Sbjct: 301 KMAKERSELRSSLIGTGDRSE-----RIRTYNFAQGR-VKDHRVEGTISDVNALMDGFLL 354

Query: 345 DFMKATLAIKK 355
           D +   L  K+
Sbjct: 355 DEITEKLKRKR 365


>gi|77920283|ref|YP_358098.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
 gi|119361572|sp|Q3A129|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77546366|gb|ABA89928.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           carbinolicus DSM 2380]
          Length = 356

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 94/239 (39%), Positives = 144/239 (60%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMY+R+AE + +K E + + D E  G K    +I
Sbjct: 106 DDKNVILEIRAGTGGDEAALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   ++  R HTS  ++ V P  +D ++++I  +D RID 
Sbjct: 166 SGNRVYSQLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAED-VDVDIDPTDLRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITH+PTGVVV CQ E+SQHKNKA+A  +L++++ +  +  +
Sbjct: 225 YRASGAGGQHVNKTESAVRITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMADQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +  A +    K+++G G   ++IR+Y   P     D R  +       ++ G+L + ++
Sbjct: 285 Q--AQMAADRKSQVGSGDRSQRIRTYNF-PQGRCTDHRIGLTLYRLEGIMQGNLSELVE 340


>gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895116|gb|EFG74834.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 357

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 182/337 (54%), Gaps = 11/337 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP L  N  EA+   R    L   ++  ++++    D     ELA   DD S  
Sbjct: 18  LEQRLADPDLHSNPAEARKAGRRFARLAPIVATYRKLESARGDLETARELAA--DDESFA 75

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E ++   R+  E++ +  + L   +  D++D  LEV +G GG ES  +A  L RMY R+
Sbjct: 76  DEVTELAARVA-ELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRY 134

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYDSN 199
           AE+  +    L+    +  G K ATL I  KG +A G W  +K E GVHR+ R+   +S 
Sbjct: 135 AERHGWNVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRVQRVPVTESQ 194

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS + + VYP  ++  E+ I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+
Sbjct: 195 GRVHTSAAGVLVYPEPEEVGEVHIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 254

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318
           VV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +    +IR+Y   
Sbjct: 255 VVTCQNERSQLQNKARALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNF- 313

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 314 PENRITDHRIGYKAHNLDQVLDGDLDAMFDALGAADK 350


>gi|294085498|ref|YP_003552258.1| protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665073|gb|ADE40174.1| Protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 358

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A LEV AG GG E+  +A+ L  MY R++ K  +K E +E+ +    G K AT  I
Sbjct: 108 DARNAILEVRAGTGGDEAALFASDLFGMYQRFSAKYGWKFEVMEVSETGIGGYKEATATI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + +  LK E GVHR+ R+   ++  R HTS +++ V P  +D +++E+ ESD RID 
Sbjct: 168 TGSDVFARLKFESGVHRVQRVPETETGGRIHTSAATVAVLPEAED-VDVEVVESDLRIDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + 
Sbjct: 227 FRASGPGGQSVNTTDSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARV 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           +  A      K ++G G    +IR+Y   P   V D R N+       V+ G+ LD+ + 
Sbjct: 287 Q--AERAADRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIAGEALDEVID 343

Query: 349 ATLA 352
           A ++
Sbjct: 344 ALIS 347


>gi|210634612|ref|ZP_03298189.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
 gi|210158740|gb|EEA89711.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
          Length = 355

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 182/326 (55%), Gaps = 16/326 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDC 82
           L  K  DP +  ++ E   L +E  H  + +   +E    L D     E+   A + D+ 
Sbjct: 15  LEKKLSDPSIASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIEAAKEMLREATDADEK 74

Query: 83  SILQ-ETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139
            +LQ E S+N  ++ +LE + K    L+ G+  D  D  +E+ + AGG E+  +A  L +
Sbjct: 75  EMLQMEISENEAKLPQLEEDIKIM--LIPGDPMDEKDTIVEIRSAAGGDEAAIFAGDLFK 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E +K+K E L+    +  G KS    + G   Y  +K E GVHR+ R+   +S 
Sbjct: 133 MYQRFIESKKWKMEVLDSSPSDAGGFKSIEFKVTGDRVYSVMKYESGVHRVQRVPKTESQ 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R  TS +++ V P  D+ I+++I++SD RIDTY ASG GGQ VNTT SAVRITH+PT  
Sbjct: 193 GRIQTSTATVAVLPEADE-IDVQINQSDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNT 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VVQ Q++RSQ +N+     MLRA+LYE+EL+K++  A +G     +IG G    +IR+Y 
Sbjct: 252 VVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERSAQIGHGNRSEKIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD 342
            QP   V D R     T  + VL GD
Sbjct: 310 -QPQDRVTDHRIGFNSTY-NGVLLGD 333


>gi|111225294|ref|YP_716088.1| peptide chain release factor 1 [Frankia alni ACN14a]
 gi|111152826|emb|CAJ64570.1| peptide chain release factor RF-1 [Frankia alni ACN14a]
          Length = 362

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 149/241 (61%), Gaps = 9/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ DA LEV AGAGG ES  +A  LLRMY R+AE+R +KTE L+ +  +  G +  ++ +
Sbjct: 106 DARDAILEVKAGAGGEESALFAGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAV 165

Query: 173 K------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           K      G   YG L+ E GVHR+ R+   +S  R HTS + + V P  ++ +++EI  +
Sbjct: 166 KARGSAAGDGVYGRLRFEGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAEE-VDVEIDPN 224

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK  A  +LRA+L  
Sbjct: 225 DLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGLVVSCQNEKSQLQNKESALRILRARLLG 284

Query: 287 LELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +  +K E  A++  +S+   +    ++R+Y     + + D R   +  +   VLDG+LD+
Sbjct: 285 VAREKAEAEASLARASQVRTVDRSERVRTYNFAENR-ISDHRVGYKAHNLDQVLDGELDE 343

Query: 346 F 346
            
Sbjct: 344 V 344


>gi|229087819|ref|ZP_04219935.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
 gi|228695494|gb|EEL48363.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
          Length = 358

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 187/350 (53%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +
Sbjct: 1   MNDVLDRLQAVEDRYEKLNELLSDPEIISDSNKLREYSKEQSDIQDTVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ +   +++E    L+    E E  +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEEKLDAEMRDMVKEEVSELE--GQEKELSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|229020548|ref|ZP_04177293.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
 gi|229026769|ref|ZP_04183101.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228734492|gb|EEL85154.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228740768|gb|EEL91021.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
          Length = 358

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ +   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEDKLDAEMREMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4]
 gi|61214640|sp|Q727E1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223554|sp|A1VAK8|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           vulgaris DP4]
 gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
          Length = 357

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 143/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMYTR+AE   +K E L   D +  G K    LI
Sbjct: 105 DDKNILLEIRAGTGGEEASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   ++  R HTS +++ V P  ++ ++++I   D RID 
Sbjct: 165 AGDKVYSRLKYESGTHRVQRVPATEAQGRIHTSAATVAVMPEAEE-VDVDIRPDDLRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITH+PTG+VV CQ E+SQHKNKA+A  +L +++ + E ++ 
Sbjct: 224 YRASGAGGQHVNKTESAVRITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQERA 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +  I ++ +  +G G    +IR+Y   P   + D R N+   S   V++G+L   + A
Sbjct: 284 HSV--IADARRALVGSGDRSERIRTYNY-PQSRITDHRINLTLYSLDKVMEGELAPLVDA 340


>gi|219850039|ref|YP_002464472.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
 gi|254790871|sp|B8G7K1|RF1_CHLAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219544298|gb|ACL26036.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
          Length = 361

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/351 (36%), Positives = 188/351 (53%), Gaps = 18/351 (5%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   AV QR   L      P +  NV   +   RE++ L++ ++  +E Q      + 
Sbjct: 1   MFDKLEAVAQRYDELTQLMAQPEVATNVTLLQQYAREQRELEDIVTTYREYQA-AQRAIA 59

Query: 72  LLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
             E  L+E+D    ++ QE  D  QR +L    +Q + LL      DS D  +E+  G G
Sbjct: 60  EAEAMLDENDPELRALAQEELDT-QRKRLATLEEQLKVLLLPRDPNDSKDVIMEIRQGEG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE R +K E   + +    GIK     I G  AY  LK E G
Sbjct: 119 GDEAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P V+++ EIEI   D RID +R++G GGQ VNTT
Sbjct: 179 VHRVQRVPATEARGRIHTSTATVAVLPEVEET-EIEIKPEDLRIDVFRSAGHGGQGVNTT 237

Query: 247 DSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           DSAVRI +    P  +VV CQ  RSQ +N+ +A  +LRA+LY  E +KR+    IG S  
Sbjct: 238 DSAVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQR--EIGASRL 295

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            ++G G    +IR+Y   P   + D R     ++   VLDG+LD  ++A +
Sbjct: 296 AQVGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALI 345


>gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [Mycobacterium sp. MCS]
 gi|119869991|ref|YP_939943.1| peptide chain release factor 1 [Mycobacterium sp. KMS]
 gi|126436449|ref|YP_001072140.1| peptide chain release factor 1 [Mycobacterium sp. JLS]
 gi|119361564|sp|Q1B542|RF1_MYCSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223572|sp|A3Q3C2|RF1_MYCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223573|sp|A1UJZ5|RF1_MYCSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108771270|gb|ABG09992.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           MCS]
 gi|119696080|gb|ABL93153.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           KMS]
 gi|126236249|gb|ABN99649.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           JLS]
          Length = 357

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 133/344 (38%), Positives = 180/344 (52%), Gaps = 25/344 (7%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCS 83
           L  +  DP L  +  +A+   R    L   ++  ++++    D    LE A E   DD S
Sbjct: 18  LERQLADPALHADAGKARKAGRRFAQLAPIVATYRKLEAARGD----LEAARELGADDAS 73

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANML 137
              E  +      LE    Q E+ LS         D++D  LEV +G GG ES  +A  L
Sbjct: 74  FAAEVPE------LEATVDQLETQLSDLLAPRDPHDADDIVLEVKSGEGGEESALFAADL 127

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVR 192
            RMY R+AE+  +    L+    +  G K ATL I  KG +A G W  LK E GVHR+ R
Sbjct: 128 ARMYIRYAERHGWSVTILDETTSDLGGYKDATLSIRSKGDSADGVWSRLKFEGGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + VYP  ++  +++I ESD RID YR+SG GGQ VNTTDSAVRI
Sbjct: 188 VPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRI 247

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQ 311
           TH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L E Q   + +    S    +    +
Sbjct: 248 THLPTGIVVTCQNERSQLQNKARAMQVLAARLQSLAEEQASADASADRASQIRTVDRSER 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N +  +   VLDGDLD    A  A  K
Sbjct: 308 IRTYNF-PENRIADHRINFKAHNLDQVLDGDLDPLFDALAAADK 350


>gi|331090678|ref|ZP_08339527.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400092|gb|EGG79743.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 356

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 202/349 (57%), Gaps = 14/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L    +A +  K  +  + D
Sbjct: 1   MFDRLEDLIIRFEEIMGELQEPDVANDQNRFRKLMKEQADLTPIVDAYNEYKSAKQAIAD 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
           +  +LE+  +E+   +  +E S + +R++ E+E++    LL  +  D  +  +E+ AGAG
Sbjct: 61  SEEMLEMESDEEMRELAKEELSASKKRVE-ELEHELKILLLPKDPNDDKNIMVEIRAGAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ES  +A  + RMY  +AE +++KTE +  ++    G K    ++ G + Y  +K E G
Sbjct: 120 GDESALFAAEVYRMYVHYAESKRWKTELISFNENGIGGFKEVVFMVSGQSVYSRMKYESG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P  ++ +++ I + D RID  RASG GGQ VNTT
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDDKDIRIDVMRASGNGGQCVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++      E+ +++I
Sbjct: 239 DSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQI 296

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V + R  +      ++++GDLD+ +   +A
Sbjct: 297 GTGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDPLIA 344


>gi|189025285|ref|YP_001933057.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|238689313|sp|B2S1Z9|RF1_TREPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189017860|gb|ACD70478.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059466|gb|ADD72201.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 351

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 27/338 (7%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  + E+P L+ +    +  MR+  +L    S + E  DR     +L E  LE+    I 
Sbjct: 15  LQQEVENPSLFSSTQSYRERMRDHAYL----SRLMEEYDRY----LLTEKQLEDAHVLIQ 66

Query: 86  QETSDNLQRI----------KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            E+  + + +           L    K+ ++LL         +  +E+  G GG E+  +
Sbjct: 67  DESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDPLQEKNIIMEIRGGTGGDEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT +AE ++++ E L + + E  G K  T  I G + YG L+ E GVHR+ R+
Sbjct: 127 AADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +++ R HTS  ++ V P ++++ E++I   D R+D  RASG GGQ VNTTDSAVR+T
Sbjct: 187 PSTEASGRIHTSAVTVAVLPEMEET-EVDIRAEDVRVDVMRASGPGGQCVNTTDSAVRLT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ E+SQ KNKA+A  +LR+++Y+LE  KR ++A   E  K+++G G    
Sbjct: 246 HLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKR-QVARARE-RKSQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   V D R  +       V+ G LDD ++
Sbjct: 304 RIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIE 340


>gi|157273346|gb|ABV27245.1| peptide chain release factor 1 [Candidatus Chloracidobacterium
           thermophilum]
          Length = 357

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 188/347 (54%), Gaps = 20/347 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   A++ +   L  +  DP +  +      L ++   L   +   +E Q    +   
Sbjct: 1   MFDKLKALEEKYEALTAQLSDPEVVADAARYAKLAKQHSELTEVVEKFREYQTIEANLAS 60

Query: 72  LLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123
             EL  E +D  ++    + +     QR + ++E    E LL+ + D ND     LE+ A
Sbjct: 61  ARELLNEAEDAEMVALAREEIALLEKQRAQCQLE---LEQLLTPK-DPNDRKNVLLEIRA 116

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  LLRMY R+AE+R ++ + L+    E  G+K   +LI+G   Y  LK 
Sbjct: 117 GTGGNEASLFAGELLRMYLRYAERRGWRVQILDESLSEVGGLKEGIVLIEGTGVYSRLKH 176

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +S  R HTS  ++ V P  ++ ++IEI   D RIDT+ +SG GGQ V
Sbjct: 177 ESGVHRVQRVPVTESAGRIHTSTVTVAVLPEAEE-VDIEIDPKDVRIDTFCSSGPGGQSV 235

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVR+TH+PTG+VV  Q E+SQ KN+ +A+ +LRA+L ELE QK+ E   I    +
Sbjct: 236 NTTYSAVRLTHLPTGLVVSIQDEKSQIKNREKAFRILRARLLELERQKQHE--AIAGERR 293

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            ++G G    +IR+Y  +  + V D R  +       ++DG+LD  +
Sbjct: 294 AQVGTGERSEKIRTYNFKENR-VTDHRIGLTLHQLDTIMDGELDGLI 339


>gi|325914250|ref|ZP_08176600.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325539505|gb|EGD11151.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 361

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E      GE  G K     +
Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDIEEIVINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
              A   ++ K ++G G   ++IR+Y   P   + D R   +      ++++GDLD  + 
Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343

Query: 349 ATL 351
             L
Sbjct: 344 RLL 346


>gi|296393116|ref|YP_003658000.1| peptide subunit release factor 1 [Segniliparus rotundus DSM 44985]
 gi|296180263|gb|ADG97169.1| peptide chain release factor 1 [Segniliparus rotundus DSM 44985]
          Length = 354

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 148/244 (60%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  LEV +GAGG ES  +A  L+RMYT++AE+R+++ E L + + +  G+K AT+ I
Sbjct: 101 DGDDVVLEVKSGAGGEESALFAGDLMRMYTKFAERRRWRVEVLSMAESDLGGVKDATISI 160

Query: 173 K--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           K            + WLK E GVHR+ R+   +S  R HTS + +  YP  +D+ +I I 
Sbjct: 161 KRTGGDQSPANGVWAWLKHEGGVHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPDIVID 220

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E++ RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L
Sbjct: 221 ETELRIDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARL 280

Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            +L  +K    A  G   +   +    +IR+Y   P   + D R   +  +   VL+GDL
Sbjct: 281 EQLREEKAAAEAASGRKEQIRTVDRSERIRTYNF-PENRITDHRIGYKANNLDMVLEGDL 339

Query: 344 DDFM 347
           +  +
Sbjct: 340 EAML 343


>gi|218283971|ref|ZP_03489832.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
 gi|218215488|gb|EEC89026.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
          Length = 358

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS++A LE+   AGG E   +A  L RMY+++AE + ++TE +E+ D E  G    +  +
Sbjct: 108 DSHNAILEIRGAAGGDEGNIFAGDLFRMYSKYAEAKGWRTEVIEMEDSEAGGFSLVSFKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS +++   P V+ + + +I  +D  I+T
Sbjct: 168 NGEGAYGTLKFESGSHRVQRVPKTESQGRIHTSTATVLCMPEVE-AEDFDIDMNDLEIET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SGAGGQH+N TDSAVRI H PTG+VV+CQ  RSQH+N+A A   +RA++YE E Q+ 
Sbjct: 227 MRSSGAGGQHINKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRARVYE-ERQRE 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +  N  E  +T+IG G    +IR+Y   P   V D R          ++DG LDD M A
Sbjct: 286 LDQKNEKE-RRTKIGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMDGRLDDLMAA 343


>gi|40062805|gb|AAR37689.1| peptide chain release factor 1 [uncultured marine bacterium 440]
          Length = 359

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/234 (42%), Positives = 143/234 (61%), Gaps = 7/234 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+ +A LE+ AG GG E+  +   L +MY +     K+  E + I      G K   LL
Sbjct: 106 ADAKNAILEIRAGTGGDEAGLFVADLYKMYEKVCLNNKWSFEIISISKSGAGGFKEVILL 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG N Y +LK E+GVHR+ R+   ++  R HTS +++ V P  ++ ++I+I E D RID
Sbjct: 166 IKGNNIYSFLKYERGVHRVQRVPKTETQGRVHTSAATVAVLPEAEE-VDIKIQEKDLRID 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR++G+GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKN+A+   +LR+++YE E +K
Sbjct: 225 VYRSTGSGGQSVNTTDSAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRVYEAEREK 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +++     +  K +IG G    +IR+Y   P   V D R N+      + L GD
Sbjct: 285 KDK--ERSKDRKNQIGSGDRSERIRTYNF-PQGRVTDHRINVTLHKLKEFLSGD 335


>gi|71893491|ref|YP_278937.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae J]
 gi|119361562|sp|Q4AAJ5|RF1_MYCHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71851618|gb|AAZ44226.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae J]
          Length = 361

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/336 (36%), Positives = 183/336 (54%), Gaps = 35/336 (10%)

Query: 43  KMLMRERQHLDNA-----ISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQ 93
           ++L  ++Q+L  A     IS I E+  +  D+  +LE    + ++EDD  ++Q     L 
Sbjct: 27  QILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LA 81

Query: 94  RIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++++    K  E          L   + D  D  +E+   AGG E+  +   L +MY +W
Sbjct: 82  KVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKW 141

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+ +K K + L        G       I G   Y  LK E GVHR+ R+   ++  R HT
Sbjct: 142 ADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHT 201

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+VV  Q
Sbjct: 202 STATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVVTSQ 261

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQP 319
            ERSQ  NK  A  +L++K+Y LELQK+++  +      G  +++E     +IR+Y   P
Sbjct: 262 DERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-P 315

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              + D R N   TS   ++ G L+  ++A LA +K
Sbjct: 316 QDRLTDHRINFS-TSLKPIIQGSLNPIIEALLAQEK 350


>gi|261366981|ref|ZP_05979864.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
 gi|282571098|gb|EFB76633.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
          Length = 359

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 153/249 (61%), Gaps = 8/249 (3%)

Query: 107 LLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  +AD   +  LE+ AGAGG E+  +A+ L RMYT +A KR +  + +  ++ E  G+
Sbjct: 101 LLPKDADDEKNVILEIRAGAGGEEAALFAHSLWRMYTMYASKRGWSCQTISANETELGGV 160

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     ++G + Y  LK E GVHR+ R+   ++  R HTS  ++ V P  ++ +E+E+  
Sbjct: 161 KEVVFSVEGADVYSRLKFESGVHRVQRVPETETQGRIHTSTVTVAVMPEAEE-VELELDP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+R+SGAGGQH+N T SA+R+TH+PTG+VV+CQ +RSQ +NK +A  +LR++L 
Sbjct: 220 KDLRIDTFRSSGAGGQHINKTSSAIRVTHLPTGMVVECQDQRSQRENKERALTVLRSRLL 279

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           + + Q  +E  N  E  ++++G G    +IR+Y   P   V D R  +   +   VLDGD
Sbjct: 280 QQKQQAYDEAYN--EKRQSQVGTGDRSEKIRTYNF-PQDRVTDHRIGLTLRNLQGVLDGD 336

Query: 343 LDDFMKATL 351
           LD  ++  +
Sbjct: 337 LDRVLEPLI 345


>gi|289663473|ref|ZP_06485054.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667596|ref|ZP_06488671.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 361

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E      GE  G K     +
Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLAEAERSK- 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
              A   ++ K ++G G   ++IR+Y   P   + D R   +      ++++GDLD  + 
Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343

Query: 349 ATL 351
             L
Sbjct: 344 RLL 346


>gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
 gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
          Length = 357

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 102/245 (41%), Positives = 145/245 (59%), Gaps = 11/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMY+R+AE +++K E +   +    G K     I
Sbjct: 105 DEKNILLEIRAGTGGEEAALFAGDLFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ + P  ++ +++ I  +D RID 
Sbjct: 165 SGDKVYSRLKYESGAHRVQRVPATESQGRIHTSAVTVAIMPEAEE-VDVAIDPNDLRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQ 290
           YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQHKNKA+A  +LR++L   E E Q
Sbjct: 224 YRSSGPGGQSVNTTDSAVRVTHIPTGLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQ 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A    S ++++G G    +IR+Y   P   V D R N+       VL+GDLD+  
Sbjct: 284 RLEQEA----SRRSQVGSGDRSERIRTYNF-PQSRVTDHRINLTLYKLEAVLEGDLDELF 338

Query: 348 KATLA 352
              +A
Sbjct: 339 DGLIA 343


>gi|197301354|ref|ZP_03166435.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
 gi|197299511|gb|EDY34030.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
          Length = 356

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 150/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  + RMY  +A+ R++KTE + +++    G K    ++
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E GVHR+ R+   +S  R HTS  ++ V P  ++ +++ I E D RID 
Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K+
Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A+     +++IG G    +IR+Y   P   V D R  +       +L+GDLD+ + +
Sbjct: 285 Q--ASEAAERRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEIIDS 341

Query: 350 TLA 352
            +A
Sbjct: 342 LIA 344


>gi|254476963|ref|ZP_05090349.1| peptide chain release factor 1 [Ruegeria sp. R11]
 gi|214031206|gb|EEB72041.1| peptide chain release factor 1 [Ruegeria sp. R11]
          Length = 351

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/256 (40%), Positives = 148/256 (57%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    ADS  A LE+  G GG E+  +A  LLRMY R+AE + +  E +E    E 
Sbjct: 92  QLALLPRDAADSKPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEAQGWTFEIIEEQSTEL 151

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K     +KG N +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++ 
Sbjct: 152 GGLKEVVAHVKGNNVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDLR 210

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V    E+SQH+N+  A  +LR 
Sbjct: 211 IDPADLRIDTMRASGAGGQHVNTTDSAVRITHIPTGIIV-VSSEKSQHRNREIAMQVLRT 269

Query: 283 KLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LY+LE Q+       +  + +G   ++E     +IR+Y   P   + D R N+      
Sbjct: 270 RLYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLD 323

Query: 337 DVLDGDLDDFMKATLA 352
            ++ GDLD+ + A  A
Sbjct: 324 QIMQGDLDEIIDALTA 339


>gi|206895451|ref|YP_002247173.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738068|gb|ACI17146.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 360

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 125/338 (36%), Positives = 190/338 (56%), Gaps = 15/338 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   L    E+P +  +  +   LMRE+  LD  I  I + + +L  ++   +  LEE 
Sbjct: 12  ERYESLVRDLENPEIASDPEQLMKLMREKSQLDPIIEKIADYR-KLIRDIESAKAILEEP 70

Query: 81  DCSILQETSD----NLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
               L+E ++    NL+ I L  + K+ + LL      D     +E+ AG GG E+  +A
Sbjct: 71  GEDELKELAEEELRNLEDI-LPQKEKELKLLLVEPDPMDEKPVIVEIRAGVGGEEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++ +K E ++ +  +  G K     ++G   Y  LK E GVHR+ R+ 
Sbjct: 130 GDLFRMYTRYAERKGWKVELVDSNPTDLGGFKEVVFSVEGDRVYSRLKYESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P VD+ +EIEI+E D  IDT+RA G GGQ+V   ++AVRI H
Sbjct: 190 ETESSGRIHTSTATVAVLPEVDE-VEIEINEEDLEIDTFRAGGHGGQNVQKNETAVRIKH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311
            PTG+VV CQ ERSQ +NK +A  +LRAKLYE +L++R++  ++    ++ IG    G +
Sbjct: 249 KPTGIVVTCQDERSQLQNKMKALKVLRAKLYERQLEERQK--SMSSFRRSLIGSAERGEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           IR+Y     + V D R N         LDGDLD+ + A
Sbjct: 307 IRTYNFMQNR-VTDHRINYTIYYLDRFLDGDLDEMIDA 343


>gi|328555408|gb|AEB25900.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208]
 gi|328913779|gb|AEB65375.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3]
          Length = 356

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 184/339 (54%), Gaps = 13/339 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77
           QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D   +LE  L
Sbjct: 10  QRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLADAKAMLEDKL 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           + D   +++E    LQR + E   ++ + LL      D  +  +E+   AGG E+  +A 
Sbjct: 70  DADMREMVKEEISELQR-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G HR+ R+  
Sbjct: 129 NLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGAHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+
Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +I
Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQNRKSAVGSGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R  +       +L+G LD+ ++A +
Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343


>gi|320169793|gb|EFW46692.1| peptide chain release factor 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 523

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 102/245 (41%), Positives = 153/245 (62%), Gaps = 9/245 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +A LEV AG GG E+  +++ +  MY  +AE R +K E ++I   +  G K A+ 
Sbjct: 257 EVDDRNAILEVRAGTGGLEASLFSSDMFTMYQNYAEIRGWKFEVIDISRSDVGGFKEASA 316

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +G LK E GVHR+ R+   +S  R HTS  ++ + P   D ++IE++E D RI
Sbjct: 317 TISGYGVFGHLKFESGVHRVQRVPQTESQGRVHTSTVTVALLPEAQD-VDIELNERDLRI 375

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASGAGGQHVN T+SA+R+THIP+G+ V  Q++RSQHKN+A+A+++LRA+LYE++  
Sbjct: 376 ETMRASGAGGQHVNKTESAIRVTHIPSGIAVHVQEDRSQHKNRAKAYSVLRARLYEIQ-- 433

Query: 291 KREEIANIGESSKTE-IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            RE++A    + + E +G G    +IR+Y   P   V D R N+      + L G+  D 
Sbjct: 434 -REKLAQERAAHRAEQVGTGSRSERIRTYNF-PQDRVTDHRVNVTLHGVPEFLLGEGLDE 491

Query: 347 MKATL 351
           + A+L
Sbjct: 492 IIASL 496


>gi|190572913|ref|YP_001970758.1| peptide chain release factor 1 [Stenotrophomonas maltophilia K279a]
 gi|229576662|sp|B2FQ14|RF1_STRMK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190010835|emb|CAQ44444.1| putative peptide chain release factor 1 [Stenotrophomonas
           maltophilia K279a]
          Length = 360

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E    + GE  G K     +
Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+  LK E G HR+ R+   +S  R HTS +++ + P  D+  +I I+ +D ++DT
Sbjct: 167 VGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH N+ +A   L+A+L + E Q++
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLLDAERQRQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
           +  A   ES + ++G G   ++IR+Y   P   + D R   +      ++L GDLD  ++
Sbjct: 287 D--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILAGDLDPLLQ 343


>gi|332980841|ref|YP_004462282.1| peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1
           BON]
 gi|332698519|gb|AEE95460.1| bacterial peptide chain release factor 1 (bRF-1) [Mahella
           australiensis 50-1 BON]
          Length = 356

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 191/342 (55%), Gaps = 11/342 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+  +R   L+ K  DP +       + L++E   L+  ++  +E ++ +     +L + 
Sbjct: 6   DSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDDVLAMI 65

Query: 77  LEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQD 132
            E  D  + +     L  +K  E + ++    L    D ND     +E+ AGAGG E+  
Sbjct: 66  KETGDAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAGGEEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+ +AE R +K E ++ +  +  GIK     ++G  AY  LK E GVHR+ R
Sbjct: 126 FAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P  ++ +E+EI+ +D RID YR++G GGQ VNTTDSAVRI
Sbjct: 186 VPVTEAGGRIHTSTATVAVLPEAEE-VEVEINPNDLRIDVYRSTGHGGQSVNTTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ E+SQ KNK +A  +L+++L  L + + E+ A + ++ ++++G G   
Sbjct: 245 THIPTGMVVTCQDEKSQLKNKDKAMRVLKSRL--LAIAQAEQDAQLAQTRRSQVGTGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R  +        L+GD+D+ + A +
Sbjct: 303 ERIRTYNF-PQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALI 343


>gi|288554407|ref|YP_003426342.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
 gi|288545567|gb|ADC49450.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
          Length = 356

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 184/337 (54%), Gaps = 11/337 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78
           R + LN    DP +  +  + +   +E+  ++  +      KE+  +  D   +LE  L+
Sbjct: 11  RYNRLNELLSDPDIISDSKKLREFSKEQSDIEETVQAYREYKEVVSQYKDAKAMLEDKLD 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANML 137
           ++  ++++E  D L   + E+E +    LL  +  D  +  +E+   AGG E+Q +A  L
Sbjct: 71  DEMYAMVKEEMDELSTRQEELEARLKILLLPKDPNDDKNVIVEIRGAAGGDEAQLFAGDL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            +MY+R+AE + +KTE +E    E  G K     + G  AY  LK E G HR+ R+   +
Sbjct: 131 YKMYSRFAEAQGWKTEVIEATSTELGGYKEIIFSVNGAGAYSKLKYENGAHRVQRVPQTE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P  ++ +E+EI E D R+DT+ +SG GGQ VNTT SAVR+TH+PT
Sbjct: 191 SGGRIHTSTATVAVLPEAEE-VEVEIHEKDIRVDTFTSSGPGGQSVNTTMSAVRLTHLPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G VV CQ E+SQ KNK +A  +LRA++Y  +  +RE  A   ++ K  +G G    +IR+
Sbjct: 250 GTVVSCQDEKSQIKNKEKAMKVLRARVY--DKVQREVQAEYDQNRKLAVGTGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   V D R  +       +L G LD+ + A +
Sbjct: 308 YNF-PQSRVTDHRIGLTIQKLEQILQGKLDEVIDALI 343


>gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21]
 gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21]
          Length = 355

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/222 (43%), Positives = 135/222 (60%), Gaps = 7/222 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+ AG GG E+  +A  L RMY R+A +  +K E + ++  E  G K     
Sbjct: 103 ADNKPAMLEIRAGTGGDEAALFAGDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVAS 162

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + GPN +  LK E GVHR+ R+   +S  R HTS +++ V P  D+ +++++  ++ +ID
Sbjct: 163 VTGPNVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDE-VDVQLDPTELKID 221

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQHVNTTDSA+RITH+PTG VV CQ  RSQHKNK +A  +LR +LY  + Q+
Sbjct: 222 TYRASGAGGQHVNTTDSAIRITHLPTGTVVTCQDGRSQHKNKEKAMQVLRTRLY--DAQR 279

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
                   E+ K  +G G    +IR+Y   P   V D R  +
Sbjct: 280 EATQGAEAEARKAMVGSGDRSERIRTYNY-PQGRVTDHRIGL 320


>gi|289549312|ref|YP_003474300.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
 gi|289182929|gb|ADC90173.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
          Length = 359

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/352 (35%), Positives = 188/352 (53%), Gaps = 27/352 (7%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R L     + D D    RL F         + + + E + L R  Q     +  ++E ++
Sbjct: 16  RYLQLQAEVLDPDIVKDRLKF-------AQISKELKELEELHRLHQEYRKILKELEETKE 68

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L  N  L  LA EE    + +E     +RIK+ +       L   E DS +  LE+ AG
Sbjct: 69  -LLKNPELEPLAKEEIK-RLEKELESTEKRIKIHL-------LPKDERDSKNVILEIRAG 119

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +A  LL MY R+AE++ +K   L        G K    L++G  AY  LK E
Sbjct: 120 VGGEEAALFARDLLHMYQRYAEEKGWKFSILSAQKTGLGGYKEVIALVEGEGAYSRLKYE 179

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   ++  R HTS +++ V P  D++ E+ I   D +I+T+RAS AGGQ+VN
Sbjct: 180 SGVHRVQRVPVTEAGGRIHTSTATVAVLPEADET-EVHIDPKDLKIETFRASSAGGQYVN 238

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303
           TT++AVRITH+PTG+VV CQ ERSQ++N+ +A  +L A+L +  + QKREE+A      +
Sbjct: 239 TTETAVRITHLPTGIVVTCQDERSQYQNRMKALKILYARLKDFYDRQKREELAK---EKR 295

Query: 304 TEIGWGRQIRSYVLQPYQMVK----DLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IG G   RS  ++ Y  ++    D R N+      DVL+G LD+ + A +
Sbjct: 296 EQIGTGE--RSEKIRTYNFIQNRVTDHRINLTIYRLQDVLEGKLDEIIDALI 345


>gi|32267276|ref|NP_861308.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
 gi|46576742|sp|Q7VFA0|RF1_HELHP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32263329|gb|AAP78374.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
          Length = 355

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/244 (41%), Positives = 148/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +  ++    G K    L+
Sbjct: 104 DNKNIYLEIRAGTGGDEAGIFVGDLFKAYCRYADLQKWKVEIISSNENNVGGYKEVIALV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AY  LK E G HR+ R+   +S  R HTS  ++ + P VDD +EI I+ +D +ID 
Sbjct: 164 KGNGAYSKLKFEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEININPNDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNK +A  +L+A+LYE EL+ +
Sbjct: 223 FRSGGHGGQSVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
              A   E+ KT++G G    +IR+Y   P   + D R  +   S  ++ L G LD+F+ 
Sbjct: 283 N--AQNKEARKTQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDEFIN 339

Query: 349 ATLA 352
             +A
Sbjct: 340 PLIA 343


>gi|120612308|ref|YP_971986.1| peptide chain release factor 1 [Acidovorax citrulli AAC00-1]
 gi|166223521|sp|A1TTC4|RF1_ACIAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120590772|gb|ABM34212.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax
           citrulli AAC00-1]
          Length = 360

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/259 (40%), Positives = 152/259 (58%), Gaps = 9/259 (3%)

Query: 95  IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++LE E ++   LL  + D + +A+LE+ AG GG ES  +A  L RMYTR+A    +K E
Sbjct: 90  VQLEDELQRL--LLPRDPDEARNAFLEIRAGTGGDESALFAGDLARMYTRYAATAGWKVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L   D E  G K   L ++G   YG L+ E G HR+ R+   ++  R HTS  ++ V P
Sbjct: 148 ILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D+   I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NK
Sbjct: 208 EPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           A+A  +L+A++ E E  + E  A      K  +G G    +IR+Y   P   + D R N+
Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAALRKGLVGSGDRSDRIRTYNF-PQGRLTDHRINL 324

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                  +++GDL + ++A
Sbjct: 325 TLYKLLAIMEGDLGEVLEA 343


>gi|268678716|ref|YP_003303147.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616747|gb|ACZ11112.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 355

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/236 (42%), Positives = 143/236 (60%), Gaps = 7/236 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L + Y R+AE R +K E + + +G   G K    LI
Sbjct: 104 DERNIFLEIRAGTGGDEAAIFAADLFKSYLRYAENRGWKVEVVSLSEGVLNGYKEVIALI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  A+  LK E GVHR+ R+   +S  R HTS  ++ V P VDD +E++I E D +ID 
Sbjct: 164 KGQGAFSRLKYEGGVHRVQRVPLTESQGRVHTSAVTVAVMPEVDD-VEVDIQEKDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITH+PTG+VV  Q  +SQHKNK  A  +L+AKLY++++Q+R
Sbjct: 223 MRSSGNGGQSVNTTDSAVRITHLPTGIVVVNQDGKSQHKNKDAAMKILKAKLYDMQMQER 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
              A   E+ K ++G G    +IR+Y   P   + D R  +       +++G L D
Sbjct: 283 N--AKESEARKQQVGSGDRSARIRTYNY-PQNRITDHRVGLTLYRLDAIMEGGLYD 335


>gi|15834912|ref|NP_296671.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270285082|ref|ZP_06194476.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270289105|ref|ZP_06195407.1| peptide chain release factor 1 [Chlamydia muridarum Weiss]
 gi|301336478|ref|ZP_07224680.1| peptide chain release factor 1 [Chlamydia muridarum MopnTet14]
 gi|13878666|sp|Q9PL16|RF1_CHLMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7190335|gb|AAF39160.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
          Length = 359

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 189/346 (54%), Gaps = 21/346 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           ++RL  +     DP+++ N  E   L +E   L    NA   I   +  L D+ + L   
Sbjct: 9   LRRLEEVEKLISDPNIFSNPKEYSSLSKEHARLSEIKNAHESILAAKKILHDDKLALSTE 68

Query: 77  LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130
            + +  ++L+E      ++L+R+      KQ E+LL      +D    +E+ AG GG E+
Sbjct: 69  KDPEMIAMLEEGIQGGEESLERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +    +RMY  +A  + ++ E L   + +  G K   + + G +   +L+ E G HR+
Sbjct: 124 ALFVGDCVRMYHLYASIKGWQCEVLSASESDLGGYKEYIMGVSGTSVKRFLQYEAGTHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   ++  R HTS  +I V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSA
Sbjct: 184 QRVPETETQGRVHTSAVTIAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTGVVV CQ ERSQHKNKA+A  +L+A++ + E+QKRE+ A+   S+  ++G G
Sbjct: 244 VRITHIPTGVVVSCQDERSQHKNKAKAMRVLKARIRDAEVQKREQEASAMRSA--QVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R  +   +   V+ G+LD    A ++
Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMQGELDMITTALVS 346


>gi|218507716|ref|ZP_03505594.1| peptide chain release factor 1 [Rhizobium etli Brasil 5]
          Length = 282

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L   +GE  G K     
Sbjct: 30  ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 89

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 90  ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 148

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 149 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 207

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++++ + 
Sbjct: 208 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 264

Query: 349 ATLA 352
           A +A
Sbjct: 265 ALMA 268


>gi|71892127|ref|YP_277859.1| peptide chain release factor 1 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|119361510|sp|Q492V8|RF1_BLOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71796233|gb|AAZ40984.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 360

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 150/246 (60%), Gaps = 9/246 (3%)

Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
            DSND    ++E+ AG GG E+  +   L RMY R++E R++K E +    GE  G K  
Sbjct: 103 TDSNDKLGCFIELRAGTGGKEAAIFTGELFRMYVRYSEVRRWKMEIINATYGECGGYKEI 162

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
              I    AY  LK E G HR+ RI   +S  R HTS  +I V P + D     I   D 
Sbjct: 163 IAKIPYRGAYSLLKFESGGHRVQRIPHTESQGRIHTSTCTIAVIPEIPDIELPSIDPHDL 222

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT+R+SGAGGQHVNTTDSA+RITH+P+G+VV+CQ ERSQHKNKA+A ++L ++L+ +E
Sbjct: 223 RIDTFRSSGAGGQHVNTTDSAIRITHVPSGLVVECQDERSQHKNKAKALSVLGSRLHAIE 282

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +++R++   +  + +  +G G    +IR+Y  Q  + + D R +      +++++G+LD 
Sbjct: 283 MKRRQQ--EVSCTRRNLLGTGDRSDRIRTYNFQQGR-ITDHRISFTSYKLNEIMNGELDL 339

Query: 346 FMKATL 351
            ++  +
Sbjct: 340 LIQPII 345


>gi|21241714|ref|NP_641296.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|294626107|ref|ZP_06704714.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666025|ref|ZP_06731287.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|24418638|sp|Q8PNU5|RF1_XANAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21107082|gb|AAM35832.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|292599556|gb|EFF43686.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604217|gb|EFF47606.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 361

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 96  KLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           +LE    Q  SLL      +D   +LEV AG GG E+  +A  L RMY R+AE++ +K E
Sbjct: 88  RLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
                 GE  G K     + G  AY  LK E G HR+ R+   +S  R HTS +++ + P
Sbjct: 148 IESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+
Sbjct: 208 EADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANR 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-N 329
            +A   L+A+L  L+ ++ +  A   ++ K ++G G   ++IR+Y   P   + D R   
Sbjct: 268 DKAMKRLKAQL--LDTERSKAAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEG 324

Query: 330 IEKTSPSDVLDGDLDDFM 347
           +      ++++GDLD  +
Sbjct: 325 LTLYDLPNIIEGDLDALI 342


>gi|329121081|ref|ZP_08249712.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
 gi|327471243|gb|EGF16697.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
          Length = 359

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 191/344 (55%), Gaps = 15/344 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   L  K  DP + +N  + +   +E   L   ++  ++ +  +      LE+  +++ 
Sbjct: 12  RYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVVETQNAALEILNDKNQ 71

Query: 82  CSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWANML 137
             + +   ++L+  + E+E  + +  LL    D ND+    LE+ AG GG E+  +   L
Sbjct: 72  EELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAALFVADL 131

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           L+MY ++AE RK+K   +++++ +  G +     I G NAY  LK E GVHR+ RI   +
Sbjct: 132 LKMYLKFAEHRKWKCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQRIPETE 191

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S+ R HTS  ++ V P  +D ++IEIS+ D R+D YRASGAGGQH+N T SA+RITH+PT
Sbjct: 192 SSGRVHTSAVTVAVLPEAED-VDIEISKEDIRVDVYRASGAGGQHINKTSSAIRITHLPT 250

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV CQ ER Q +N+ +A  +L+A+LY+  L+K +  +   ++ K ++G G    +IR+
Sbjct: 251 GIVVTCQNERDQRQNREKAMQILKARLYDEALRKTK--SETAQNRKEQVGSGDRSERIRT 308

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDL----DDFMKATLAIK 354
           Y   P   + D R  +        ++G +    D  ++A L +K
Sbjct: 309 YNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEADLNLK 351


>gi|312115445|ref|YP_004013041.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220574|gb|ADP71942.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 361

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/318 (36%), Positives = 182/318 (57%), Gaps = 14/318 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQ----DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
           K L +E   LD  ++ IK ++    +R     ++ + A E D   + +E  +  +    +
Sbjct: 33  KKLSKEFSDLDPLVAAIKTLEAAEEERDSLRQMIEDPAAEPDMAELAREELEAAEPRVEQ 92

Query: 99  VEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           +E++ Q   L    AD   A LEV AG GG E+  +A  L RMY R+A+ + +K   L +
Sbjct: 93  LEHELQIMLLPKDAADEKSAILEVRAGTGGEEAALFAADLFRMYQRYADLKGWKVNVLSV 152

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            D +  G +     I G   +  +K E GVHR+ R+   ++  R HTS +++ V P  ++
Sbjct: 153 SDADAGGFREIVASISGKGVFARMKFESGVHRVQRVPETENQGRIHTSAATVAVLPEAEE 212

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++EI E D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V    E+SQH+N+A+A 
Sbjct: 213 -VDVEIREQDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIIV-TSSEKSQHQNRARAM 270

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334
            +LRA+L+++E  + +E A   E  K +IG G   ++IR+Y   P   V D R N+   +
Sbjct: 271 QVLRARLFDMERTRIDE-ARAAE-RKDQIGSGDRSQRIRTYNF-PQGRVTDHRVNVTLYN 327

Query: 335 PSDVLDGD-LDDFMKATL 351
              +++G+ LD  + A +
Sbjct: 328 LPQIMEGEGLDTIIDALI 345


>gi|222087303|ref|YP_002545840.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
 gi|254790855|sp|B9JB75|RF1_AGRRK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221724751|gb|ACM27907.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
          Length = 359

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +   L RMY R+A    +K E L   DGE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ITGKGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+A  +LR++L+++E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLFDMERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   V D R N+       +++G++D+ + 
Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIDEVVD 341

Query: 349 ATLA 352
           A  A
Sbjct: 342 ALRA 345


>gi|308175429|ref|YP_003922134.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
 gi|307608293|emb|CBI44664.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
          Length = 356

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 184/339 (54%), Gaps = 13/339 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77
           QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D   +LE  L
Sbjct: 10  QRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLTDAKAMLEDKL 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           + D   +++E    LQR + E   ++ + LL      D  +  +E+   AGG E+  +A 
Sbjct: 70  DADMREMVKEEISELQR-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G HR+ R+  
Sbjct: 129 NLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGAHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+
Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +I
Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQNRKSAVGSGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R  +       +L+G LD+ ++A +
Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343


>gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18]
 gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18]
          Length = 359

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 182/333 (54%), Gaps = 14/333 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED- 80
           R   L +   DP +  N  E + L +E   L   I+  +E +  L D     EL  E D 
Sbjct: 13  RFEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADIGDNRELLKEPDQ 72

Query: 81  ---DCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136
              + +  +  S   +R +LE E K    LL  +  D  +  LE+ AG GG ES  +A  
Sbjct: 73  EMREMAQAELESLEERREQLESEIKVL--LLPKDPNDDKNVVLEIRAGTGGDESALFAGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+R+AE  +++ E +   + E+ G K    L++G   +  LK E G HR+ R+   
Sbjct: 131 LFRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYESGTHRVQRVPET 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITHIP
Sbjct: 191 EAQGRIHTSACTVAVMPEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHIP 249

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG VV CQ+ERSQ KN+A+A  +L++++ +  L   E+ A +    K+++G G    +IR
Sbjct: 250 TGTVVACQEERSQIKNRAKAMKVLKSRILDNILM--EQNAKLAADRKSQVGSGDRSERIR 307

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +Y   P   + D R  +       ++ GD+ + 
Sbjct: 308 TYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEI 339


>gi|329848654|ref|ZP_08263682.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
 gi|328843717|gb|EGF93286.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/282 (38%), Positives = 165/282 (58%), Gaps = 20/282 (7%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133
           L E++   L+E+  +L+R           +LL    D ++   A LE+ AG GG E+  +
Sbjct: 76  LAEEELGALKESLPDLER---------GVALLLAPKDKDENASAILELRAGTGGDEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY+R+A  + +K E   + +GE  G K     + G   +G LK E GVHR+ R+
Sbjct: 127 AGDLFRMYSRYAAAQGWKVEVDSLSEGEAGGFKEIIASVTGEGVFGKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P  +D +EIEI + D RIDTYR+SGAGGQHVN TDSAVRIT
Sbjct: 187 PATEAGGRIHTSAATVAVLPEAED-VEIEIHDKDLRIDTYRSSGAGGQHVNKTDSAVRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV    E+SQH+N+A A   L+A++Y+++ Q  +   +  +S K+++G G    
Sbjct: 246 HLPTGIVV-TSSEKSQHQNRAIAMRNLKARMYDMQRQALDTARS--DSRKSQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   +    ++GD+   + A +A
Sbjct: 303 RIRTYNY-PQGRVSDHRINLTLYNLPQFMEGDMGQMINALIA 343


>gi|78046531|ref|YP_362706.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|119361637|sp|Q3BX07|RF1_XANC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78034961|emb|CAJ22606.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 361

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 96  KLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           +LE    Q  SLL      +D   +LEV AG GG E+  +A  L RMY R+AE++ +K E
Sbjct: 88  RLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
                 GE  G K     + G  AY  LK E G HR+ R+   +S  R HTS +++ + P
Sbjct: 148 IESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+
Sbjct: 208 EADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANR 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-N 329
            +A   L+A+L  L+ ++ +  A   ++ K ++G G   ++IR+Y   P   + D R   
Sbjct: 268 DKAMKRLKAQL--LDAERSKAAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEG 324

Query: 330 IEKTSPSDVLDGDLDDFM 347
           +      ++++GDLD  +
Sbjct: 325 LTLYDLPNIIEGDLDALI 342


>gi|300814565|ref|ZP_07094819.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511333|gb|EFK38579.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 358

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 176/306 (57%), Gaps = 26/306 (8%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSN 115
           K+ ++ L D+  LL   L++D   ++++       NL++I+ +++      +L    D N
Sbjct: 52  KKTKENLNDSKALLAEKLDDDMKDLVKDDISTNEKNLEKIEEDLK------ILLIPKDPN 105

Query: 116 D---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     +E+ AGAGG E+  +A  L R Y R+AE+  +K + +  ++    G K    +I
Sbjct: 106 DKKNVMVEIRAGAGGDEAALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V+D +E+EI  ++ + D 
Sbjct: 166 IGRGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEVED-VEVEIDPTEIKFDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ  NK +A  +LRAKLY+L++Q++
Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQ 284

Query: 293 EE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E      ++ +G   ++E     +IR+Y   P   V D R N        + DG+LD+ 
Sbjct: 285 NEKNSAQRLSQVGTGDRSE-----RIRTYNY-PQGRVTDHRINYTTHQIDSINDGELDEL 338

Query: 347 MKATLA 352
           + A  A
Sbjct: 339 IDALTA 344


>gi|325929457|ref|ZP_08190585.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
 gi|325540232|gb|EGD11846.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
          Length = 361

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 9/258 (3%)

Query: 96  KLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           +LE    Q  SLL      +D   +LEV AG GG E+  +A  L RMY R+AE++ +K E
Sbjct: 88  RLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
                 GE  G K     + G  AY  LK E G HR+ R+   +S  R HTS +++ + P
Sbjct: 148 IESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+
Sbjct: 208 EADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANR 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-N 329
            +A   L+A+L  L+ ++ +  A   ++ K ++G G   ++IR+Y   P   + D R   
Sbjct: 268 DKAMKRLKAQL--LDAERSKAAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEG 324

Query: 330 IEKTSPSDVLDGDLDDFM 347
           +      ++++GDLD  +
Sbjct: 325 LTLYDLPNIIEGDLDALI 342


>gi|223983553|ref|ZP_03633736.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
 gi|223964481|gb|EEF68810.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
          Length = 359

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 143/244 (58%), Gaps = 9/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+   AGG E   +A  L RMY R+AE + +K + LE+ + E  G    + L+
Sbjct: 108 DDHDCIVEIRGAAGGDEGNIFAGDLYRMYVRYAETQGWKIQVLEMSESEAGGFSMISFLV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   ++  R HTS +++ V P  +++ +IEI  +D   +T
Sbjct: 168 KGGEVYRQLKFESGAHRVQRVPKTETQGRIHTSTATVLVLPDAEEA-DIEIDPADLTFET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQK 291
           +RASGAGGQH+N TDSAVRI H+PTG+ V CQ+ RSQH+N+  A  ++RA++Y EL  QK
Sbjct: 227 HRASGAGGQHINKTDSAVRIVHVPTGITVNCQEGRSQHENRETALRLIRARVYEELTRQK 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            EE    G   + +IG G    +IR+Y   P   V D R          +++G LDD + 
Sbjct: 287 EEE---EGAVRRAKIGTGDRSEKIRTYNY-PQNRVTDHRIGFTINQLDRIMEGKLDDVIA 342

Query: 349 ATLA 352
           A LA
Sbjct: 343 ALLA 346


>gi|163943017|ref|YP_001647901.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
 gi|229470347|sp|A9VSC7|RF1_BACWK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163865214|gb|ABY46273.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
          Length = 355

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              +LE  L+ D   +++E    L+    E    +   +L    D ND     +EV   A
Sbjct: 61  AKAMLEDKLDADMRDMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E 
Sbjct: 119 GGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P  ++ +EI I E D R+DT+ +SG GGQ VNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  
Sbjct: 238 TMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 341


>gi|54020410|ref|YP_115756.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 232]
 gi|61214589|sp|Q601F9|RF1_MYCH2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53987583|gb|AAV27784.1| peptide chain release factor 1 (RF-1), peptide termination factor
           [Mycoplasma hyopneumoniae 232]
          Length = 361

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/319 (36%), Positives = 176/319 (55%), Gaps = 30/319 (9%)

Query: 55  AISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQRIKLEVEYKQFES---- 106
           +I+ I E+  +  D+  +LE    + ++EDD  ++Q     L ++++    K  E     
Sbjct: 44  SITEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LAKVEIATMSKNIEEYEKK 98

Query: 107 -----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
                L   + D  D  +E+   AGG E+  +   L +MY +WA+ +K K + L      
Sbjct: 99  LLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLAL 158

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G       I G   Y  LK E GVHR+ R+   ++  R HTS +++ V P +D+ IEI
Sbjct: 159 AGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEI 218

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+VV  Q ERSQ  NK  A  +L+
Sbjct: 219 EINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILK 278

Query: 282 AKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +K+Y LELQK+++  +      G  +++E     +IR+Y   P   + D R N   TS  
Sbjct: 279 SKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-PQDRLTDHRINFS-TSLK 331

Query: 337 DVLDGDLDDFMKATLAIKK 355
            ++ G+L+  ++A LA +K
Sbjct: 332 PIIQGNLNPIIEALLAQEK 350


>gi|152977515|ref|YP_001377032.1| peptide chain release factor 1 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189039958|sp|A7GV79|RF1_BACCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152026267|gb|ABS24037.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98]
          Length = 355

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/353 (35%), Positives = 189/353 (53%), Gaps = 24/353 (6%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVEDRYEKLNELLSDPAVINDSNKLREYSKEQSDIQETVEVYREYKDVREQLQD 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFE---SLLSGEADSND---AYLEV 121
              +LE  L+ +   ++ +E SD      LEV+ K+      +L    D ND     +E+
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSD------LEVQEKELSDRLKILLVPKDPNDDKNVIVEI 114

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
              AGG E+  +A  L RMY+R+AE + +KT+ +E    E  G K    +I G  AY  L
Sbjct: 115 RGAAGGDEAALFAGDLYRMYSRYAEMQGWKTDIIEASYTELGGYKEIIFMINGKGAYAKL 174

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ
Sbjct: 175 KFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDTFASSGPGGQ 233

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++
Sbjct: 234 SVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRQ--EAQAEYDQN 291

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +
Sbjct: 292 RKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALV 343


>gi|312884085|ref|ZP_07743798.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368255|gb|EFP95794.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 362

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 149/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AGAGG E+  +A  L RMY+++AEK+ ++ E +  ++ E  G K     +
Sbjct: 109 DDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKFAEKKGWRIEVMSSNEAEHGGYKEMIAKV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG +K E G HR+ R+   +S  R HTS  ++ +   + ++   EI  +D +IDT
Sbjct: 169 SGEGAYGIMKFESGGHRVQRVPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++  ++ ++ 
Sbjct: 229 FRASGAGGQHVNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEA 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A   ++ +  +G G    +IR+Y   P   V D R N+     ++V++GD+   +  
Sbjct: 287 KRAAEESDTRRNLLGSGDRSDRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDP 345

Query: 350 TL 351
            L
Sbjct: 346 VL 347


>gi|229496751|ref|ZP_04390462.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
 gi|229316297|gb|EEN82219.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
          Length = 362

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 155/279 (55%), Gaps = 20/279 (7%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+A  ++ C  LQE      +I L +       L     D  +A +E+ AG GG E+  +
Sbjct: 85  EIAFADEQCPQLQE------KIALLL-------LPDDPEDGKNAIMEIRAGTGGDEAALF 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L +MYTR+ E   ++ E     +G   G K     + G NAYG LK E GVHR+ R+
Sbjct: 132 ARDLFKMYTRFVEGLGWRVEVSSYTEGTLGGYKEIVFSVTGDNAYGTLKYESGVHRVQRV 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V+P  D+  ++EI ESD RIDT+ +SGAGGQ VNTT SAVRI 
Sbjct: 192 PETEAQGRIHTSAATVAVFPEADE-FDVEIKESDLRIDTFCSSGAGGQSVNTTYSAVRIV 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+ VQ Q ERSQ KNKA+A   LR+++Y LE QK   +  +    KT +  G    
Sbjct: 251 HVPTGITVQSQDERSQLKNKAKALTELRSRIYNLEHQKY--LDEVASRRKTMVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   + D R  +   +   VLDGDL   + A
Sbjct: 309 KIRTYNY-PQGRLTDHRIGLTLYNLQAVLDGDLKPIIDA 346


>gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
 gi|119361566|sp|Q2GE03|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
          Length = 367

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/260 (41%), Positives = 159/260 (61%), Gaps = 9/260 (3%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           KLE+E K+   L   + D+ +  LEV AG GG E+  +A  L  MY ++AE+ K++ E +
Sbjct: 93  KLELEIKRM-LLPKDKDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEII 151

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
            I   E  G K A   I G + +  LK E GVHR+ R+   +S  R HTS +++ V P  
Sbjct: 152 SISHNEIGGYKEANASISGSDVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEP 211

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +D ++++I++ D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKN+A+
Sbjct: 212 ED-VDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAK 270

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A  +LR +LYE+E  K ++   I    K++IG G    + R+Y   P   + D R N+  
Sbjct: 271 AMKVLRVRLYEIERNKVQQ--EISSMRKSQIGSGERSEKTRTYNF-PQGRITDHRINLTT 327

Query: 333 TSPSD-VLDGDLDDFMKATL 351
              ++ V +G+L+  ++A +
Sbjct: 328 YRINETVKEGELEPIIEALI 347


>gi|75762680|ref|ZP_00742519.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74489826|gb|EAO53203.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 358

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ +   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LKDAKAMLEEKLDAEMRDMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKRAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRXHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|187734557|ref|YP_001876669.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|238691860|sp|B2UL99|RF1_AKKM8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187424609|gb|ACD03888.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 358

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 187/343 (54%), Gaps = 26/343 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLELAL 77
           QRL  L T   +P  + +  +A  +MRE + L   +     +   + +L DN    ELA 
Sbjct: 12  QRLEELETVIAEPDFFNDQKKASEIMREHRRLKELMETWDSLNATEQQLADNQ---ELA- 67

Query: 78  EEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129
           + DD  +       + E    L++++ +V+Y    SLL  +  +  DA +E+ AG GG E
Sbjct: 68  KTDDPELAELAALEIPELEAALEKLRSDVQY----SLLPRDTTEDRDAIIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY R+AE+R ++ E LE    +  G K     I G   + +LK E GVHR
Sbjct: 124 ASLFAGDLLRMYQRFAEERGWRFEHLESSPSDVGGFKEVVCRIAGEEVFRFLKYEGGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P  ++ ++IEI   D RI+  R+ GAGGQHVN T+SA
Sbjct: 184 VQRVPATETQGRIHTSTATVAVMPEAEE-VDIEIRPEDLRIEVCRSGGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V+I HIPTGV V+C++ERSQ KN+ +   +LRAKL+  E +KREE      + +  IG G
Sbjct: 243 VQIWHIPTGVYVRCEEERSQMKNREKGMKILRAKLF--EAKKREEAEKYSAARRNLIGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +IR+Y   P   + D R      +   +L G L+D + A
Sbjct: 301 GREEKIRTYNF-PQNRLTDHRIGYTSHNLDGILMGQLEDLIMA 342


>gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB]
 gi|119361624|sp|Q2LWU9|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus
           aciditrophicus SB]
          Length = 357

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 146/244 (59%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLL 171
           D  + +LE+ AG GG E+  +   L RMY R+AE R++K E +         G K     
Sbjct: 105 DDRNVFLEIRAGTGGDEAGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIAS 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  AY  LK E GVHR+ R+   ++  R HTS  ++ + P  D+ +E+ I  +D RID
Sbjct: 165 IAGQGAYSQLKYESGVHRVQRVPVTEAQGRIHTSAVTVAIMPEADE-VEVTIDPNDLRID 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            + +SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNKA+A  +LRA+L ++ ++K
Sbjct: 224 VFHSSGHGGQSVNTTDSAVRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKK 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           + +   I E+ K+++G G    +IR+Y   P   V D R  +   S  ++L GD+ +F+ 
Sbjct: 284 QSD--EISEARKSQVGSGDRSERIRTYNF-PQGRVTDHRVGLTLYSLENILGGDIQEFID 340

Query: 349 ATLA 352
           A  A
Sbjct: 341 ALTA 344


>gi|239787352|emb|CAX83829.1| Peptide chain release factor RF-1 [uncultured bacterium]
          Length = 354

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D   A LE+ AG GG E+  +A  L+RMY R+A    ++ + L + +     +K A + I
Sbjct: 103 DERSAILEIRAGTGGDEAGLFAADLMRMYQRYAAIHGWQFDVLGLSETGLGSVKEAQVGI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +  LK E GVHR+ R+   +S+ R HTS +++ V P V+D ++IEI + D RID 
Sbjct: 163 VGKGVFAKLKFESGVHRVQRVPETESSGRVHTSAATVAVLPEVED-VDIEIKDEDLRIDI 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVNTTDSAVR+TH+PTG+VV  Q ERSQHKNKA+A  ++RA+LY  +L+KR
Sbjct: 222 CRASGAGGQHVNTTDSAVRLTHLPTGLVVAQQDERSQHKNKAKAMKIMRARLY--DLRKR 279

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           E+        K+++G G    +IR+Y   P   V D R N+       V+ G+ LD+ + 
Sbjct: 280 EQDEVRAADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDQVMQGEALDELID 338

Query: 349 ATLA 352
             +A
Sbjct: 339 NLIA 342


>gi|21672454|ref|NP_660521.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009047|sp|Q8K9X0|RF1_BUCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21623068|gb|AAM67732.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 361

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/236 (43%), Positives = 139/236 (58%), Gaps = 8/236 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +  ++E+ A  GG ES  +A  L RMYTR+AE   +KTE +   + E  G K     +
Sbjct: 107 DQHSCFIEIRAATGGDESSIFAGELFRMYTRYAENYMWKTEIMSSSENERGGFKEIIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A G LK E G HR+ R+   +S  R HTS  ++ + PV   + + EI  SD +IDT
Sbjct: 167 TGKGACGRLKFESGGHRVQRVPETESQGRIHTSTCTVAIMPVRPKTKKEEIKVSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSA+RITHIP+G VV+CQ ERSQHKNKA+A ++L A++Y  +L K 
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPSGNVVECQDERSQHKNKAKALSILSARVYADKLAKS 286

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQM----VKDLRTNIEKTSPSDVLDGDLD 344
           ++      SS   I  G   RS   + Y      + D R N+     ++VL G LD
Sbjct: 287 QK----ENSSMRRILLGTGERSDRNRTYNFAQNRITDHRINLTIYKLNEVLQGKLD 338


>gi|310659436|ref|YP_003937157.1| peptide chain release factor rf-1 [Clostridium sticklandii DSM 519]
 gi|308826214|emb|CBH22252.1| peptide chain release factor RF-1 [Clostridium sticklandii]
          Length = 356

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 151/242 (62%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A +L RMY+ +A  +++K E +  +D    G K    +I
Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAGVLFRMYSMYASSKRWKVELMSSNDTGVGGYKEVVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V++  E+E++ +D R+D 
Sbjct: 166 IGKGAYSRLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEVEEVGEVELNLNDVRVDV 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ KNK +A+ +LRAKLY++EL+K 
Sbjct: 226 FRSSGNGGQSVNTTDSAVRLTHVPTGIVISMQDEKSQLKNKEKAFKILRAKLYDIELEKA 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   +    K+++G G    +IR+Y   P   + D R  +        L+GDLD+ + A
Sbjct: 286 QK--EVARERKSQVGTGDRSERIRTYNY-PQGRITDHRIGVTLYKLDAFLNGDLDEMVDA 342

Query: 350 TL 351
            +
Sbjct: 343 LI 344


>gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354]
          Length = 355

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/223 (43%), Positives = 136/223 (60%), Gaps = 9/223 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+ AG GG E+  +A  L RMY R+A ++ +K E + +   E  G K     
Sbjct: 103 ADAKPAMLEIRAGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAH 162

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  D+ +++++   D +ID
Sbjct: 163 VTGTGVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDE-VDVQVDPGDLKID 221

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQHVNTTDSA+RITH+PTG+VV CQ  RSQHKN+ QA  +LRA+LYE   Q+
Sbjct: 222 TYRASGAGGQHVNTTDSAIRITHLPTGLVVTCQDGRSQHKNREQAMQVLRARLYE---QQ 278

Query: 292 REEIANI-GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           R+       E+ K  +G G    +IR+Y   P   V D R  +
Sbjct: 279 RDAAQGAEAEARKAMVGSGDRSERIRTYNF-PQGRVTDHRIGL 320


>gi|315651889|ref|ZP_07904892.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
 gi|315485891|gb|EFU76270.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
          Length = 356

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AGAGG E+  +A  L RMY  +AE + +K E +++++    G K    ++
Sbjct: 105 DDKNIMLEIRAGAGGDEAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS +S+ V P  ++ ++++I  +D RID 
Sbjct: 165 SGKGAYSKLKYESGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-VDVQIDMNDVRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYE+EL+K+
Sbjct: 224 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFTLLRSKLYEIELEKK 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +         +++IG G    +IR+Y   P   V D R N+       +++GD+ + +  
Sbjct: 284 QSAE--AADRRSQIGTGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDG 340

Query: 350 TLA 352
            +A
Sbjct: 341 CIA 343


>gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [Mycobacterium vanbaalenii PYR-1]
 gi|166223576|sp|A1TD66|RF1_MYCVP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119958111|gb|ABM15116.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 357

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/336 (38%), Positives = 173/336 (51%), Gaps = 9/336 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP L  +   AK + R    +   +S   +++    D     ELA   DD S  
Sbjct: 18  LEQRLADPELHADPAAAKKVGRRFAQISPIVSTYHKLEAARGDLEAARELAA--DDASFA 75

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  +   ++    +            D++D  LEV +G GG ES  +A  L RMY R+A
Sbjct: 76  AEVDELTTKVADLDDRLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRYA 135

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYDSNS 200
           E+  +    L     +  G K ATL I  KG +A G W  LK E GVHR+ R+   +S  
Sbjct: 136 ERHGWTVTMLGETTSDLGGYKDATLSIAGKGDSADGVWSRLKFEGGVHRVQRVPVTESQG 195

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS + + VYP  D+  +++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+V
Sbjct: 196 RVHTSAAGVLVYPEPDEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIV 255

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           V CQ ERSQ +NKA+A  +L A+L  L E Q   + +    S    +    +IR+Y   P
Sbjct: 256 VTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERIRTYNY-P 314

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              + D R N +  +   VLDGDLD    A  A  K
Sbjct: 315 ENRIADHRINYKSHNLDQVLDGDLDPLFDALAAADK 350


>gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254790877|sp|B8J4R4|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 356

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 175/327 (53%), Gaps = 18/327 (5%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETS 89
           P ++ +  + + L +    L + +   +    + + L +N +LL     ++D  I     
Sbjct: 22  PDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAENRLLLH----DEDPEIRAMAQ 77

Query: 90  DNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           + + R + E+   + E     L S   D  +  LE+ AG GG E+  +A  L RMYTR+A
Sbjct: 78  EEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGEEAALFAADLFRMYTRYA 137

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +K E +     E  G K    LI G   Y  LK E G HR+ R+   ++  R HTS
Sbjct: 138 ELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTHRVQRVPATEAQGRIHTS 197

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            +++ V P  ++ +++EI   D RID YRASGAGGQHVN T+SAVRITH+PT  VV CQ 
Sbjct: 198 AATVAVMPEAEE-VDVEIRPEDLRIDIYRASGAGGQHVNKTESAVRITHLPTNTVVTCQD 256

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQHKNKA+A  +L +++  L  ++  + + +    K ++G G    +IR+Y   P   
Sbjct: 257 ERSQHKNKARAMKVLASRI--LAAERERQSSELSADRKAQVGSGDRSERIRTYNF-PQGR 313

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             D R N+   S   +++G+L+  ++A
Sbjct: 314 CTDHRINLTLYSLDRIMEGELESLVEA 340


>gi|28199883|ref|NP_780197.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71899967|ref|ZP_00682113.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182682635|ref|YP_001830795.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|32129935|sp|Q87A17|RF1_XYLFT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691124|sp|B2IA85|RF1_XYLF2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28058004|gb|AAO29846.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71730254|gb|EAO32339.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182632745|gb|ACB93521.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|307578915|gb|ADN62884.1| peptide chain release factor 1 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 361

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 146/239 (61%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMYTR+AE++++K E      GE  G K     I
Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  D+  +I I+ +D +IDT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+PTGVVV+ Q ERSQH N+ +A   L+A+L  +E Q+ 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQL--IESQRS 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347
           ++      + K ++G G   ++IR+Y   P   + D R  N+      ++++GDLD  +
Sbjct: 285 QQATAEAMTRKLQVGSGDRSQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 342


>gi|302785656|ref|XP_002974599.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
 gi|300157494|gb|EFJ24119.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
          Length = 386

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 180/323 (55%), Gaps = 27/323 (8%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFE 105
           +E + LD ++  IK ++ +  + + L EL  E  +D  + +  S  LQ    EV   Q +
Sbjct: 53  KELRKLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHD 112

Query: 106 SLLS----GEADSNDAYLEVHA--------GAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            LL      EADS    LE           GAGG E+  +A+ L +MY ++A    ++ E
Sbjct: 113 VLLKLIPKDEADSRGCILEASCLICFIYLLGAGGDEASIFASDLFKMYEKYAANNSWRFE 172

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L I   +  G K A+ +I G + YG LK E GVHR+ R+   +   R HTS +S+ + P
Sbjct: 173 VLSITTTDTRGYKEASAVISGDDVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILP 232

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             ++ +++EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQHKNK
Sbjct: 233 EANE-VDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNK 291

Query: 274 AQAWNMLRAKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           A+A ++L A+LYELE  +    R E+    IG S ++E     +IR+Y   P   V D R
Sbjct: 292 AKALSILYARLYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHR 345

Query: 328 TNIEKTSPSDVLDG-DLDDFMKA 349
             + + S   +++G  L+ F+ A
Sbjct: 346 VGVTQHSIEQIMEGIGLEIFVNA 368


>gi|284039842|ref|YP_003389772.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
 gi|283819135|gb|ADB40973.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
          Length = 357

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 146/239 (61%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  LE+  G GG E+  +A  + RMY R+ EK  ++   ++  +G   G K     I
Sbjct: 106 DSKNVILEIRGGTGGDEAAIFAGDIFRMYQRFCEKMGWRMSLVDFTEGTSGGYKEIITEI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++ +++EI+ +D R DT
Sbjct: 166 EGEDVYGKLKFESGVHRVQRVPATETQGRIHTSAASVAVLPEAEE-VDVEINMNDIRKDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+THIPTG+VVQCQ ERSQ KN  +A  +LR++LYE+ELQK 
Sbjct: 225 FCSSGAGGQSVNTTYSAVRLTHIPTGLVVQCQDERSQLKNFDKALTVLRSRLYEIELQKH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +   I    KT +G G    +IR+Y   P   V D R  +   +   V+DG + +F++
Sbjct: 285 NDA--IASQRKTMVGSGDRSDKIRTYNY-PQSRVTDHRIGLTVYNLPSVMDGGIGEFIE 340


>gi|84516322|ref|ZP_01003682.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
 gi|84510018|gb|EAQ06475.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
          Length = 351

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 178/340 (52%), Gaps = 24/340 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R  FL  K  D     ++     L RE   L   +  +   +D L   +I  +  L++
Sbjct: 11  IDRFRFLEAKMSDAAHGGDI---AALGREYAELRPVVDTVTAYKDLLA-QMIDTQALLKD 66

Query: 80  DDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            +   L E  D L  +K  +       Q   L    AD+  A LE+  G GG E+  +A 
Sbjct: 67  PEMRALAE--DELPELKAALAASEHAVQLALLPKDAADARPALLEIRPGTGGDEASLFAG 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LLRMY R+AE   ++ E LE    E  GIK     + G   +  LK E GVHR+ R+  
Sbjct: 125 DLLRMYQRYAENMGWRFEILEQSQTELGGIKEVVARVAGEGVFARLKYESGVHRVQRVPE 184

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   D ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRI HI
Sbjct: 185 TESGGRIHTSAATVAVLPEAQD-VDIQINPNDLRIDTMRASGSGGQHVNTTDSAVRILHI 243

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWG--- 309
           PTG++V    E+SQH+N+  A  +L+ +L++LE Q+ +     GE S   K ++G G   
Sbjct: 244 PTGLIV-VSAEKSQHRNREIAMQVLKTRLFDLERQRID-----GERSADRKAQVGSGDRS 297

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +IR+Y   P   + D R N+   S   V+ GDLD  + A
Sbjct: 298 ERIRTYNF-PQGRLTDHRINLTLYSLGQVMAGDLDTIIDA 336


>gi|254521606|ref|ZP_05133661.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
 gi|219719197|gb|EED37722.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
          Length = 360

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E    + GE  G K     +
Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGYKEVVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+  LK E G HR+ R+   +S  R HTS +++ + P  D+  +I I+ +D ++DT
Sbjct: 167 VGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPETDEVDDIVINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH N+ +A   L+A+L + E Q++
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLLDAERQRQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
           +  A   ES + ++G G   ++IR+Y   P   + D R   +      ++L GDLD  ++
Sbjct: 287 D--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILAGDLDPLLQ 343


>gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_005D21]
 gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 358

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 146/239 (61%), Gaps = 7/239 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L + EADS +A LE+ AG GG E+  +   L +MY R    +K+  E + +   E  G K
Sbjct: 101 LPNDEADSKNAILEIRAGTGGLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFK 160

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              LLIKG N Y +LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++++I+E 
Sbjct: 161 EVILLIKGTNIYSFLKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEE-VDVKINEK 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID +R+SG GGQ VNTTDSAVRITH+PTG+ V  Q E+SQHKN+A+A  +LR+++Y+
Sbjct: 220 DLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIAVSQQDEKSQHKNRAKAMKILRSRVYD 279

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            E  + ++     +  K +IG G    +IR+Y   P   V D R N+      + L+GD
Sbjct: 280 AE--REKKDKKRSKDRKNQIGSGDRSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335


>gi|224477106|ref|YP_002634712.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254790897|sp|B9DMD1|RF1_STACT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222421713|emb|CAL28527.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 358

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 189/354 (53%), Gaps = 31/354 (8%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVSDSNKLREYSKEQSDLQKTVDVYRQYKQNKEDIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG----------EADSND---AY 118
           ++E+         L ETSD  +   L+ +  + +  L G            D ND     
Sbjct: 61  IVEM---------LSETSDKEEVDMLKADMNELKDTLPGLEEELKMLLIPKDPNDDKNVV 111

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ A AGG E+  +A  L RMYTR++E   +KT  +E++D +  G K  +  I G  AY
Sbjct: 112 VEIRAAAGGDEAAIFAGDLYRMYTRFSEGLGYKTGVIEMNDSDHGGFKEISFTINGQGAY 171

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E G HR+ R+   +S  R HTS +++ V P  +D +E++I ++D +I+TYR+SGA
Sbjct: 172 SKLKYENGAHRVQRVPETESGGRIHTSTATVAVLPEAED-VEVDIKDADLKIETYRSSGA 230

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITH+PTG++     E+SQ +N+ +A  +L+A++Y+++LQ+ +E    
Sbjct: 231 GGQHVNTTDSAVRITHLPTGIIA-TSSEKSQIQNREKALKVLKARVYDMKLQEEQE--KY 287

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               K+ +G G    +IR+Y   P   V D R  +       +++G LD+ + A
Sbjct: 288 DSERKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDA 340


>gi|282882091|ref|ZP_06290732.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
 gi|281298121|gb|EFA90576.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
          Length = 358

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 176/306 (57%), Gaps = 26/306 (8%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSN 115
           K+ ++ L D+  LL   L++D   ++++       NL++I+ +++      +L    D N
Sbjct: 52  KKTKENLNDSKALLAEKLDDDMKDLVKDDISTNEKNLEKIEEDLK------ILLIPKDPN 105

Query: 116 D---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     +E+ AGAGG E+  +A  L R Y R+AE+  +K + +  ++    G K    +I
Sbjct: 106 DKKNVMVEIRAGAGGDEAALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS +++ V P V+D +E+EI  ++ + D 
Sbjct: 166 IGRGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEVED-VEVEIDPTEIKFDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ  NK +A  +LRAKLY+L++Q++
Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQ 284

Query: 293 EE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E      ++ +G   ++E     +IR+Y   P   V D R N        + DG+LD+ 
Sbjct: 285 NEKNSAQRLSQVGTGDRSE-----RIRTYNY-PQGRVTDHRINYTTHQIVSINDGELDEL 338

Query: 347 MKATLA 352
           + A  A
Sbjct: 339 IDALTA 344


>gi|311745348|ref|ZP_07719133.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
 gi|126577889|gb|EAZ82109.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
          Length = 358

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 145/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS D  LE+  G+GG E+  +A  L RMY R+ E + +K   L++  G   G K     +
Sbjct: 106 DSKDCILEIRGGSGGDEASIFAGDLFRMYERFCEMQGWKLTVLDLTFGSAGGYKEIIATV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   +S  R HTS +S+ V P +D+ +E+ +  +D R DT
Sbjct: 166 SGADVYGMLKYESGVHRVQRVPATESQGRVHTSAASVAVLPEMDE-VEVHLDMNDVRKDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y +SG GGQ VNTT SAVR+TH PTG+VV CQ E+SQ KN  +A  +LR++LYE+EL K 
Sbjct: 225 YCSSGPGGQSVNTTYSAVRLTHNPTGLVVTCQDEKSQIKNFEKALKVLRSRLYEIELAKH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E  ++G   K+ +G G    +IR+Y     + V D R N    +  DV+DG +++F+ A
Sbjct: 285 NE--SVGAQRKSMVGSGDRSDKIRTYNYSQSR-VTDHRINKTVYNLPDVMDGHIEEFISA 341


>gi|295105440|emb|CBL02984.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 361

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 188/346 (54%), Gaps = 19/346 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L+ +   P    +    + LMRE    +  +   ++ Q  L D+L   + 
Sbjct: 8   MDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL-DHLAQAKA 66

Query: 76  ALEEDDC-------SILQETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
            LEE           I QE S+  Q + KLE   K    LL  +  D  +  +E+ +GAG
Sbjct: 67  LLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKIL--LLPKDVNDGKNVIMEIRSGAG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A+ LLRMYT +A+ R +  E L +++ E  G+K A + + G  AY  LK E G
Sbjct: 125 GEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P  ++ ++  +   D RIDT+R+SGAGGQH+N T
Sbjct: 185 VHRVQRVPETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SA+R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I    + ++
Sbjct: 244 SSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINAQRQGQV 301

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P     D R  +   +   ++DG+LD+ + A
Sbjct: 302 GTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDA 346


>gi|285017297|ref|YP_003375008.1| peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283472515|emb|CBA15020.1| probable peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans]
          Length = 361

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E    + GE  G K     I
Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEVESDNPGEHGGYKEIVARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  DD  EI ++ +D +IDT
Sbjct: 167 VGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIAVNPADLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A   L+A+L  L+ ++ 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKALKRLKAQL--LDAERN 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD---VLDGDLDDF 346
           ++ A   +  K ++G G   ++IR+Y   P   + D R  +E  +  D   V++GDLD  
Sbjct: 285 KQAAAEAQDRKLQVGSGDRSQRIRTYNF-PQGRITDHR--VEGLTLYDLPHVIEGDLDAL 341

Query: 347 MK 348
           ++
Sbjct: 342 IE 343


>gi|300117843|ref|ZP_07055610.1| peptide chain release factor 1 [Bacillus cereus SJ1]
 gi|298724707|gb|EFI65382.1| peptide chain release factor 1 [Bacillus cereus SJ1]
          Length = 358

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ D   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LKDAKAMLEDKLDADMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|254451602|ref|ZP_05065039.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
 gi|198266008|gb|EDY90278.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
          Length = 344

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 144/242 (59%), Gaps = 14/242 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+  G GG E+  +A  LLRMY R+AE R +  E LE    E  GIK  T  
Sbjct: 94  ADGKPALLEIRPGTGGDEAALFAADLLRMYQRYAENRGWTFEILEESQSELGGIKEVTAR 153

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G N +  +K E GVHR+ R+   +S  R HTS +++ V P  +D ++I+I+ +D RID
Sbjct: 154 IAGNNVFARMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQINANDIRID 212

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASG+GGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+  A  +L+ +LY+ E QK
Sbjct: 213 TMRASGSGGQHVNTTDSAVRITHMPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDAERQK 271

Query: 292 ------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
                  +  A +G   ++E     +IR+Y   P   + D R N+       VL GDLD+
Sbjct: 272 VHDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAVLQGDLDE 325

Query: 346 FM 347
            +
Sbjct: 326 VI 327


>gi|326318376|ref|YP_004236048.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375212|gb|ADX47481.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 360

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/259 (40%), Positives = 151/259 (58%), Gaps = 9/259 (3%)

Query: 95  IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++LE E ++   LL  + D + +A+LE+ AG GG ES  +A  L RMYTR+A    +K E
Sbjct: 90  VQLEDELQRL--LLPRDPDEARNAFLEIRAGTGGDESALFAGDLARMYTRYAATAGWKVE 147

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L   D E  G K   L ++G   YG L+ E G HR+ R+   ++  R HTS  ++ V P
Sbjct: 148 ILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D+   I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NK
Sbjct: 208 EPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           A+A  +L+A++ E E  + E  A      K  +G G    +IR+Y   P   + D R N+
Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAALRKGLVGSGDRSDRIRTYNF-PQGRLTDHRINL 324

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                  +++GDL + + A
Sbjct: 325 TLYKLLAIMEGDLGEVLDA 343


>gi|160945367|ref|ZP_02092593.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443098|gb|EDP20103.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
          Length = 361

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 188/346 (54%), Gaps = 19/346 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L+ +   P    +    + LMRE    +  +   ++ Q  L D+L   + 
Sbjct: 8   MDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL-DHLAQAKA 66

Query: 76  ALEEDDC-------SILQETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
            LEE           I QE S+  Q + KLE   K    LL  +  D  +  +E+ +GAG
Sbjct: 67  LLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKIL--LLPKDVNDGKNVIMEIRSGAG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A+ LLRMYT +A+ R +  E L +++ E  G+K A + + G  AY  LK E G
Sbjct: 125 GEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P  ++ ++  +   D RIDT+R+SGAGGQH+N T
Sbjct: 185 VHRVQRVPETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SA+R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I    + ++
Sbjct: 244 SSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINAQRQGQV 301

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           G G    +IR+Y   P     D R  +   +   ++DG+LD+ + A
Sbjct: 302 GTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDA 346


>gi|224417848|ref|ZP_03655854.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
          Length = 356

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 178/315 (56%), Gaps = 20/315 (6%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K++ + +Q+L N  S   E    L D+  L +LA EE     ++E    L+   LE E K
Sbjct: 44  KLVQKSKQYLKNLESI--EENKGLLDDKELGDLAKEE-----IKEAE--LENQNLESEIK 94

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
               LL  +  D  + YLE+ AG GG E+  +   L + Y R+AE + +K E +   +  
Sbjct: 95  IL--LLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLFKAYIRYAESKGWKVEIISSSENN 152

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K    LIKG  AY  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+
Sbjct: 153 VGGYKEVIALIKGKGAYSRLKFEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEV 211

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            I+ +D RI+ +RA G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNK +A  +L+
Sbjct: 212 VINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKILK 271

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A++YE EL+ + E     E+ K+++G G    +IR+Y   P   + D R  +   S  ++
Sbjct: 272 ARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTYNY-PQNRLSDHRIGLTLYSLEEI 328

Query: 339 -LDGDLDDFMKATLA 352
            L+GDLD  ++  +A
Sbjct: 329 MLNGDLDQVIEPIIA 343


>gi|15616337|ref|NP_244642.1| peptide chain release factor 1 [Bacillus halodurans C-125]
 gi|20139353|sp|Q9K6F4|RF1_BACHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|10176399|dbj|BAB07494.1| peptide chain release factor 1 in translation [Bacillus halodurans
           C-125]
          Length = 356

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/338 (34%), Positives = 185/338 (54%), Gaps = 11/338 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELAL 77
           +R   LN    DP +  +  + +   +E+  ++  +   +E   + D+  D   +LE  L
Sbjct: 10  ERYERLNELLSDPEVISDSNKLREYSKEQADMEETVQVYREYKTVMDQYQDAKEMLEDKL 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136
           +++  ++++E  D L   K ++E K    LL  +  D  +  +EV   AGG E+Q +A  
Sbjct: 70  DDEMYAMVKEEIDELATRKEDLEAKLKVLLLPKDPNDDKNVIVEVRGAAGGDEAQLFAAD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L +MY R+AE + +K E +E    E  G K     + G  AY  LK E G HR+ R+   
Sbjct: 130 LYKMYARYAEAQGWKIEVIEASSTELGGYKEIIFSVNGKGAYSKLKYENGAHRVQRVPQT 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+P
Sbjct: 190 ESGGRIHTSTATVAVLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +IR
Sbjct: 249 TGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R  +       +L G LD+ +++ +
Sbjct: 307 TYNF-PQSRVTDHRIGLTLQKLEQILQGKLDEIIESLI 343


>gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
 gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
          Length = 359

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 178/325 (54%), Gaps = 24/325 (7%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  E + L +E   L   ++  +E +  L D     EL  E D     QE  + 
Sbjct: 23  DPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPD-----QEMREM 77

Query: 92  LQRIKLEVEYKQFESLLSGE-------ADSND---AYLEVHAGAGGTESQDWANMLLRMY 141
            Q   L +E ++   +L GE        D ND     LE+ AG GG ES  +A  L RMY
Sbjct: 78  AQAELLSLEARR--EVLEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMY 135

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           +R+AE  +++ E +   + E+ G K    L++G   +  LK E G HR+ R+   ++  R
Sbjct: 136 SRFAETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGR 195

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS  ++ V P  +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV
Sbjct: 196 IHTSACTVAVMPEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVV 254

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ+ERSQ KN+A+A  +L++++  L+    E+ A +    K+++G G    +IR+Y   
Sbjct: 255 ACQEERSQIKNRAKAMKVLKSRI--LDNIVMEQNAKLAADRKSQVGSGDRSERIRTYNF- 311

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDL 343
           P   + D R  +       ++ GD+
Sbjct: 312 PQGRMTDHRIGLTLYRLDAIMAGDI 336


>gi|227503858|ref|ZP_03933907.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
 gi|227199481|gb|EEI79529.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
          Length = 358

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/288 (39%), Positives = 167/288 (57%), Gaps = 15/288 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132
           E+A E+ D    Q+  D L+ + +E+E K  + L    E DS D  +E+ AGAGG E+  
Sbjct: 66  EMAYEDHD---FQDEVDRLEPLVVELEEKLADLLAPRDEHDSEDIIMEIKAGAGGEEAAL 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGV 187
           +A  L RMY R+A+K  F+ E L +++ +  G+K  ++  K        A+   K E GV
Sbjct: 123 FAGDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS + + VYP  D+   + I E D R+D YR+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESQGRIQTSAAGVLVYPEPDEVESVNIDEKDLRVDVYRSSGKGGQGVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306
           SAVRITH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A  GE   +++ 
Sbjct: 243 SAVRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQIEREARE--AEAGEQRASQVR 300

Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 +IR+Y   P   + D R   +  +   VL+GD+ D + A  A
Sbjct: 301 TLDRSERIRTYNW-PENRITDHRIGYKANNLDAVLNGDMQDLITALQA 347


>gi|149174661|ref|ZP_01853286.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
 gi|148846355|gb|EDL60693.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
          Length = 360

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/338 (35%), Positives = 181/338 (53%), Gaps = 12/338 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   L  + +DP +  N  +   + RE   L      ++E   R  D  +  E+  EE D
Sbjct: 12  RYEELEKELQDPEVLANTSKLVEIQREYGGLAKVALAVREFNTRAEDIEVAREMLEEETD 71

Query: 82  CSILQETSDNLQRIKLEVE--YKQFESLL-SGEADSNDAY-LEVHAGAGGTESQDWANML 137
            +  +     L  +  E E   K+ E L+ +G++ +     +E+ AGAGG E+  +A  L
Sbjct: 72  PAAREYAQKELDELCEEHEKHIKELEDLVVAGDSITRGGLIMEIRAGAGGDEAALFAREL 131

Query: 138 LRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
             MY  + E +K +KTE L +   E  G+K  T  I G  AY  L+ E G HR+ R+   
Sbjct: 132 FDMYMHFVEAQKGWKTEVLNMSATELGGLKEVTFSIAGEGAYHRLQFESGGHRVQRVPET 191

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + +E++I   D R+DT+ ASG GGQ VN T+SAVRITH+P
Sbjct: 192 ETQGRVHTSAATVAVLPEASE-VEVDIKPDDIRLDTFHASGPGGQKVNKTESAVRITHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG VVQCQ E+SQHKNKA+A  +LR+++ E   QK  +     +  +T IG G   ++IR
Sbjct: 251 TGTVVQCQDEKSQHKNKAKAMRVLRSRVLEQMQQKAAD--ERADQRRTLIGSGDRSQRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R N+       ++ GDL+D + A L
Sbjct: 309 TYNF-PQGRVTDHRINLSLYKIDQIMQGDLNDLISALL 345


>gi|229164277|ref|ZP_04292210.1| Peptide chain release factor 1 [Bacillus cereus R309803]
 gi|228619217|gb|EEK76110.1| Peptide chain release factor 1 [Bacillus cereus R309803]
          Length = 358

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ +   +++E    L+    E+  +    +L    D ND     +EV 
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELEGQDKELSARL--KILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|254438684|ref|ZP_05052178.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
 gi|198254130|gb|EDY78444.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
          Length = 344

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 144/242 (59%), Gaps = 14/242 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+  G GG E+  +A  LLRMY R+AE R +  E LE    E  GIK  T  
Sbjct: 94  ADGKPALLEIRPGTGGDEAALFAGDLLRMYQRYAESRGWTFEILEESQSELGGIKEVTAR 153

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G N +  +K E GVHR+ R+   +S  R HTS +++ V P  +D ++I+I+ +D RID
Sbjct: 154 IAGNNVFARMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQINANDIRID 212

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASG+GGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+  A  +L+ +LY+ E QK
Sbjct: 213 TMRASGSGGQHVNTTDSAVRITHMPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDAERQK 271

Query: 292 ------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
                  +  A +G   ++E     +IR+Y   P   + D R N+       +L GDLD+
Sbjct: 272 VHDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAILQGDLDE 325

Query: 346 FM 347
            +
Sbjct: 326 VI 327


>gi|242309130|ref|ZP_04808285.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
 gi|239524171|gb|EEQ64037.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
          Length = 356

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 179/317 (56%), Gaps = 24/317 (7%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K++ + +Q+L N  S   E    L D+  L +LA EE     ++E     Q ++ E++  
Sbjct: 44  KLVQKSKQYLQNLQSI--EENKSLLDDKELGDLAKEE-----IKEAEAQNQELESEIK-- 94

Query: 103 QFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
               +L    D ND    YLE+ AG GG E+  +   L + Y R+AE + +K E +  ++
Sbjct: 95  ----VLLLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLFKAYVRYAESKGWKVEIISSNE 150

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
               G K    LIKG  AY  LK E G HR+ R+   +S  R HTS  ++ + P VDD +
Sbjct: 151 NNFGGYKEVIALIKGKGAYSRLKYEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-V 209

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E+ I+ +D +I+ +RA G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNK +A  +
Sbjct: 210 EVVINPNDLKIEVFRAGGHGGQCVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKI 269

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L+A++YE EL+ + E     E+ K+++G G    +IR+Y   P   + D R  +   S  
Sbjct: 270 LKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTYNY-PQNRLSDHRIGLTLYSLE 326

Query: 337 DV-LDGDLDDFMKATLA 352
           ++ L+GDLD  ++  +A
Sbjct: 327 EIMLNGDLDQVIEPIIA 343


>gi|260576769|ref|ZP_05844754.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
 gi|259021021|gb|EEW24332.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
          Length = 351

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/344 (36%), Positives = 188/344 (54%), Gaps = 18/344 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R  FL  K           E   L RE   L   ++ I   + R  D+L   E 
Sbjct: 7   LDQISRRFEFLEAKLA---AGAGHAEIASLSREYTDLKPVVAEISAYR-RALDDLAQAEA 62

Query: 76  ALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131
            L + +   L E  + L  +K    E+E     +LL  +A D+  A LE+  G GG E+ 
Sbjct: 63  LLADPEMRPLAE--EELPSLKARIPELEQALRLALLPKDAADARPAILEIRPGTGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ E ++  D +  GI+  T+ ++G   +  LK E GVHR+ 
Sbjct: 121 LFAADLLRMYQRYAESQGWRFEIIDQQDSDLGGIRDVTVHVQGAGVFAKLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P  ++ ++++I  SD RIDT RASGAGGQHVNTTDSAVR
Sbjct: 181 RVPETESQGRVHTSAATVAVLPEAEE-VDLDIPASDIRIDTMRASGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++V   Q +SQH+N+  A  +LRA+LY+LE + R + A   +  K ++G G  
Sbjct: 240 ITHLPTGIIVTSAQ-KSQHRNRDLAMQVLRARLYDLE-RARVDGARAAD-RKAQVGSGDR 296

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+   +   ++ GDL   + A +A
Sbjct: 297 SERIRTYNF-PQGRLTDHRINLTLYALPQIMAGDLGGVIDALVA 339


>gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
 gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
          Length = 355

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/339 (36%), Positives = 184/339 (54%), Gaps = 27/339 (7%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-------FIKEI-QDRLCDNLILLELAL 77
           L  + +DP L +N    K  MRE  +L   +        F +EI Q R         +  
Sbjct: 15  LEEEIQDPALIKNQNRYKEAMREHAYLSKLMEEYAQYLRFEQEIIQTRA--------MMQ 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           EE D  + +   + L  ++ ++E  +   + LL      +  +  +E+  G GG E+  +
Sbjct: 67  EETDHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIMEIRGGTGGEEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LL+MYT +AE + +K E L  ++ E  G K  TL I G   YG L+ E GVHR+ R+
Sbjct: 127 AADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGSLRYESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  ++ V P  +++ EI I + D RID  RA G GGQ VNTTDSAVRIT
Sbjct: 187 PETEGSGRIHTSAVTVAVLPEAEET-EIVIKQEDLRIDVMRAGGPGGQCVNTTDSAVRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+VV CQ E+SQ KNKA+A  +LR++LY++E  K++  +   E  K ++G G    
Sbjct: 246 HIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQ--SERAEDRKNQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   V D R N+       ++ GDL++ ++A
Sbjct: 304 RIRTYNY-PQNRVTDHRINLTLYKLDTIMQGDLNEIVEA 341


>gi|209551100|ref|YP_002283017.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|238054472|sp|B5ZRR4|RF1_RHILW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209536856|gb|ACI56791.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 359

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG+E+  +A  L RMY R++ ++ +K E L   +GE  G K     
Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEIIAT 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IEI   D RID
Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +      K+++G G    +IR+Y   P   + D R N+       +++G++++ + 
Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRITDHRINLTLYKLDRMMEGEIEEVVD 341

Query: 349 ATLA 352
           A +A
Sbjct: 342 ALMA 345


>gi|72080478|ref|YP_287536.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 7448]
 gi|119361561|sp|Q4A8M6|RF1_MYCH7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71913602|gb|AAZ53513.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae 7448]
          Length = 361

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 183/336 (54%), Gaps = 35/336 (10%)

Query: 43  KMLMRERQHLDNA-----ISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQ 93
           ++L  ++Q+L  A     I+ I E+  +  D+  +LE    + ++EDD  ++Q     L 
Sbjct: 27  QILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LA 81

Query: 94  RIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++++    K  E          L   + D  D  +E+   AGG E+  +   L +MY +W
Sbjct: 82  KVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKW 141

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+ +K K + L        G       I G   Y  LK E GVHR+ R+   ++  R HT
Sbjct: 142 ADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHT 201

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+VV  Q
Sbjct: 202 STATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVVTSQ 261

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQP 319
            ERSQ  NK  A  +L++K+Y LELQK+++  +      G  +++E     +IR+Y   P
Sbjct: 262 DERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-P 315

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              + D R N   TS   ++ G L+  ++A LA +K
Sbjct: 316 QDRLTDHRINFS-TSLKPIIQGSLNPIIEALLAQEK 350


>gi|58583231|ref|YP_202247.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625067|ref|YP_452439.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575465|ref|YP_001912394.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75434334|sp|Q5GWQ9|RF1_XANOR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361638|sp|Q2NZW2|RF1_XANOM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689539|sp|B2SQN5|RF1_XANOP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58427825|gb|AAW76862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369007|dbj|BAE70165.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519917|gb|ACD57862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 361

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/322 (36%), Positives = 174/322 (54%), Gaps = 10/322 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  + + L RE   L+  ++   E + R   +L   E    + +   L E    
Sbjct: 25  DPDVVNNNDKFRTLSRELSQLE-PVAVALEDEARAKADLSAAEAMRTDPEMRELAEEEIA 83

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + +LE    Q  SLL      +D   +LEV AG GG E+  +A  L RMY R+AE++ 
Sbjct: 84  AAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQG 143

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E      GE  G K     + G  AY  LK E G HR+ R+   +S  R HTS +++
Sbjct: 144 WKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATV 203

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQ
Sbjct: 204 AIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQ 263

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
           H N+ +A   L+A+L + E  K    A   ++ K ++G G   ++IR+Y   P   + D 
Sbjct: 264 HANRDKAMKRLKAQLLDTEHSK--AAAAQAQTRKLQVGSGDRSQRIRTYSF-PQGRITDH 320

Query: 327 RT-NIEKTSPSDVLDGDLDDFM 347
           R   +      ++++GDLD  +
Sbjct: 321 RVEGLTLYDLPNIIEGDLDALI 342


>gi|229542476|ref|ZP_04431536.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
 gi|229326896|gb|EEN92571.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
          Length = 356

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/349 (35%), Positives = 188/349 (53%), Gaps = 16/349 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   AV+ R   LN    DP +  +  + +   +E+  L   +      KE+Q +L D
Sbjct: 1   MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              LL   L+ +   +++E    L+  K+  EY++   +L    D ND     +E+   A
Sbjct: 61  AKSLLSEKLDPEMKDMVKEEIHELES-KIP-EYEERLKILLLPKDPNDEKNVIVEIRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY R+AE + +K + +E +     G K    ++ G  AY  LK E 
Sbjct: 119 GGDEAALFAGDLYRMYMRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P  ++ +E++I+E D R+DT+ +SG GGQ VNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEVDINEKDIRVDTFASSGPGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A    + K+ 
Sbjct: 238 TMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDANRKSA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   V D R  +       VLDG LD+ + A +
Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALI 343


>gi|320449105|ref|YP_004203663.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
 gi|320151737|gb|ADW23114.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
          Length = 354

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 178/323 (55%), Gaps = 10/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-ILQETSD 90
           DP + ++    + L R    +   I+ I+E + ++ ++L  +E  LE+ +   + +   +
Sbjct: 21  DPEVLKDQKRYQALSRRYAEMGEVIALIREYR-KVLEDLEGVEGLLEDPELKEVARAEKE 79

Query: 91  NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            L   K ++E      LL  +  D  DA +E+ AG GG E+  +A  LL MY R+AE+  
Sbjct: 80  ALLSRKADLEKALERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ H  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEILDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++S + +++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEES-DFQLNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G    +IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349
           R          +L G L   ++A
Sbjct: 316 RIGFTTHDLEGILSGHLQPLLEA 338


>gi|296271838|ref|YP_003654469.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
 gi|296096013|gb|ADG91963.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
          Length = 355

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/280 (40%), Positives = 164/280 (58%), Gaps = 17/280 (6%)

Query: 56  ISFIKEIQDR--LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           IS + +IQD   L D+  L ELA EE     L++    L++  +E E K    +     D
Sbjct: 53  ISVLNDIQDNKLLYDDPELGELAKEE-----LKDLE--LRKPTIEEEIKVL-MIPKDPND 104

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           + + ++E+ AGAGG E+  +   L R Y R+AE + +K E +   + E  G K    L K
Sbjct: 105 NKNIFIELRAGAGGDEAGIFVGNLFRAYLRYAELKGWKVEIMNQSENEAGGYKEIVALFK 164

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G   Y  LK E G HR+ R+   +S  R HTS  ++ V P VDD +E+EI   D +ID  
Sbjct: 165 GEQVYSRLKYESGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEVEIDPGDLKIDVM 223

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG GGQ VNTTDSAVRITHIP+G+VV  Q ++SQHKNK +A  +L+A+LY++++Q  E
Sbjct: 224 RASGNGGQSVNTTDSAVRITHIPSGLVVTNQDQKSQHKNKDKAMKVLKARLYDIQMQ--E 281

Query: 294 EIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNI 330
           ++ + G S K ++G G    +IR+Y   P   + D R N+
Sbjct: 282 KMDSEGASRKEQVGTGDRSGRIRTYNY-PQGRISDHRINL 320


>gi|99080782|ref|YP_612936.1| peptide chain release factor 1 [Ruegeria sp. TM1040]
 gi|119361610|sp|Q1GI42|RF1_SILST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|99037062|gb|ABF63674.1| bacterial peptide chain release factor 1 (bRF-1) [Ruegeria sp.
           TM1040]
          Length = 350

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 172/315 (54%), Gaps = 15/315 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-Q 103
           L +E   L   +  I   Q  L D     E+  + D  ++ +E    L+    + E+  Q
Sbjct: 32  LAKEYSDLRPVVEQISAYQQLLSDLAEAEEMLADPDMKALAEEEIPTLKAALPQAEHALQ 91

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              L   EADS  A LE+  G GG E+  +A  L RMY+R+AE + +K + +E    E  
Sbjct: 92  LALLPKDEADSRAAILEIRPGTGGDEAALFAADLYRMYSRYAETQGWKVDVIEEQASELG 151

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G+K     I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I+I
Sbjct: 152 GLKELVARINGDGVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDIKI 210

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
             +D RIDT RASGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+ +
Sbjct: 211 DANDLRIDTMRASGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTR 269

Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           LY+LE Q+       +  + +G   ++E     +IR+Y   P   + D R N+       
Sbjct: 270 LYDLERQRIDTERSADRASQVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLDQ 323

Query: 338 VLDGDLDDFMKATLA 352
           ++ GDLD+ + A ++
Sbjct: 324 IMGGDLDEIIDALIS 338


>gi|311740614|ref|ZP_07714441.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304134|gb|EFQ80210.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 362

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 168/285 (58%), Gaps = 15/285 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132
           E+A E+ D    QE +D L++    +E K  + L    E DS D  +E+ AGAGG E+  
Sbjct: 70  EMAYEDHD---FQEEADRLEKSVESLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQGV 187
           +A  L RMY R+A+K  F  E L +++ +  G+K  T+    K P+   A+   K E GV
Sbjct: 127 FAGDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGV 186

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTD
Sbjct: 187 HRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTD 246

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306
           SAVRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A  GE   +++ 
Sbjct: 247 SAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVR 304

Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                 +IR+Y   P   + D R   +  +   VL+GD++D +KA
Sbjct: 305 TMDRSERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKA 348


>gi|312601125|gb|ADQ90380.1| Peptide chain release factor 1 [Mycoplasma hyopneumoniae 168]
          Length = 357

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 183/336 (54%), Gaps = 35/336 (10%)

Query: 43  KMLMRERQHLDNA-----ISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQ 93
           ++L  ++Q+L  A     IS I E+  +  D+  +LE    + ++EDD  ++Q     L 
Sbjct: 23  QILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LA 77

Query: 94  RIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++++    K  E          L   + D  D  +E+   AGG E+  +   L +MY +W
Sbjct: 78  KVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKW 137

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+ +K K + L        G       I G   Y  LK E GVHR+ R+   ++  R HT
Sbjct: 138 ADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHT 197

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+V   Q
Sbjct: 198 STATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVATSQ 257

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQP 319
            ERSQ  NK  A  +L++K+Y LELQK+++  +      G  +++E     +IR+Y   P
Sbjct: 258 DERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-P 311

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              + D R N   TS   ++ G+L+  ++A LA +K
Sbjct: 312 QDRLTDHRINFS-TSLKPIIQGNLNPIIEALLAQEK 346


>gi|295111719|emb|CBL28469.1| bacterial peptide chain release factor 1 (bRF-1) [Synergistetes
           bacterium SGP1]
          Length = 357

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/265 (41%), Positives = 155/265 (58%), Gaps = 13/265 (4%)

Query: 96  KLEVEYKQFE---SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +LE + + FE   ++L    D ND     +E+ AG GG E+  +A  L RMYTR+ E+++
Sbjct: 84  ELEPQIENFEKELTILLLPKDPNDEKSVIVEIRAGVGGDEAALFAADLYRMYTRFCERQR 143

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E ++       G K     I    AY  +K E G HR+ R+   +++ R HTS +++
Sbjct: 144 WKIEVIDSSLIGLGGYKEVIFRIDSHGAYSMMKYESGGHRVQRVPVTEASGRIHTSSATV 203

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P V+D IEIEI   D ++DTYR+SGAGGQHVN TDSAVRITH+PTG+V  CQ ERSQ
Sbjct: 204 AVMPEVED-IEIEIRPEDLKVDTYRSSGAGGQHVNMTDSAVRITHLPTGIVATCQDERSQ 262

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+A+A   L+A+LY LE +K+   A      +  IG G    +IR+Y   P   + D 
Sbjct: 263 IKNRARAMAYLKARLYALEQEKQN--AEQASERRGMIGSGDRSERIRTYNF-PQNRITDH 319

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           R N+      + LDGDL + + A +
Sbjct: 320 RINLTLYKLDNYLDGDLFEMIDAMI 344


>gi|71083224|ref|YP_265943.1| protein release factor class I [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|119361574|sp|Q4FN99|RF1_PELUB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71062337|gb|AAZ21340.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 357

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 7/247 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  +A +E+ AG GG E+  +A  L +MY + + ++K++ E + +   E  G+K    
Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIA 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I+G N Y  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++I+I++SD RI
Sbjct: 165 SIRGKNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDIKINDSDLRI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +RA G GGQ VNTTDSAVRITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  
Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERS 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E      E  K++IG G    +IR+Y   P   V D R N+        L+G+  D M
Sbjct: 284 RIE--GERSEDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEM 340

Query: 348 KATLAIK 354
              L ++
Sbjct: 341 VENLTLQ 347


>gi|297182760|gb|ADI18914.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0010_09O16]
          Length = 356

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/247 (40%), Positives = 150/247 (60%), Gaps = 7/247 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  +A +E+ AG GG E+  +A  L +MY +   K+K+  E + I   +  G+K    
Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAGDLFKMYEKVCNKKKWSLELISISRSDAGGLKEVIA 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG N Y  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++++I+E+D RI
Sbjct: 165 SIKGNNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDLKINETDLRI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +RA G GGQ VNTTDSAVRITH+P+G+ V  Q E+SQHKNKA+   +LRA+LYELE  
Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHLPSGLSVSQQDEKSQHKNKAKGMKILRARLYELERT 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + ++  +    SK  IG G    +IR+Y   P   V D R N+      + L+G+  D +
Sbjct: 284 RIDQERSADRKSK--IGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEEFLEGEAFDEI 340

Query: 348 KATLAIK 354
             +L++K
Sbjct: 341 IESLSLK 347


>gi|256419486|ref|YP_003120139.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
 gi|256034394|gb|ACU57938.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
          Length = 354

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 168/292 (57%), Gaps = 11/292 (3%)

Query: 65  RLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLE 120
           +  DN+   +  LE  D     + +E ++ LQ +K E E      L+  +  D  +A LE
Sbjct: 53  KTLDNIAFNKEVLESGDEEMRELAKEETEALQLLKDEQEADIRNLLIPKDPQDEKNAMLE 112

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+  +A  LLRMY R+ E + + T  +    G   G K   + + G + YG 
Sbjct: 113 IRGGTGGDEASLFAGDLLRMYLRYCETKGWSTSIMNETPGAAGGYKEVVVEVTGDDVYGT 172

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   ++  R HTS +++ + P  ++ +++EI ++D ++DT+R+SGAGG
Sbjct: 173 LKFESGVHRVQRVPATETQGRVHTSAATVAILPEAEE-VDVEIRDADIKMDTFRSSGAGG 231

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVR+THIP+GVVV+CQ+ RSQH N+  A  MLR+++YE  ++K EE   I  
Sbjct: 232 QHVNKTESAVRLTHIPSGVVVECQEGRSQHSNRDIAMKMLRSRIYEAAVRKHEEA--IAS 289

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             K+ +  G    +IR+Y   P   V D R  +   +    ++GD+ + ++A
Sbjct: 290 QRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGMTMYNLDAFMNGDIQEMVQA 340


>gi|313678884|ref|YP_004056624.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
 gi|312950243|gb|ADR24838.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
          Length = 358

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/249 (39%), Positives = 145/249 (58%), Gaps = 16/249 (6%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +  +E+   AGG E+  +A  L RMY ++A++  F+ + L  +     G      
Sbjct: 107 ENDDKNIIVEIRGAAGGDEANIFAGDLFRMYNKFADELGFRLKILSTNSANAGGFSQIVF 166

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG  AY   K E GVHR+ R+   +S  R HTS +++ V P +DD+++IEI  SD +I
Sbjct: 167 SIKGEKAYSKFKFESGVHRVQRVPVTESQGRIHTSTTTVTVMPEIDDTVDIEIKPSDLKI 226

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +R+SGAGGQ VNTTDSAVRITH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+Q
Sbjct: 227 DVFRSSGAGGQSVNTTDSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQ 286

Query: 291 KREE-------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           K+ +       +A  G+ S+       +IR+Y   P   V D R +   TS   +++G L
Sbjct: 287 KKADEESGYRKLAGHGDRSE-------KIRTYNY-PQDRVTDHRISF-STSLKPIMEGKL 337

Query: 344 DDFMKATLA 352
              ++A LA
Sbjct: 338 TPIVEALLA 346


>gi|218900455|ref|YP_002448866.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228903804|ref|ZP_04067920.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|228911168|ref|ZP_04074974.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228942476|ref|ZP_04105013.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228968458|ref|ZP_04129447.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228975408|ref|ZP_04135964.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982045|ref|ZP_04142338.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|218545538|gb|ACK97932.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228777709|gb|EEM25983.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|228784390|gb|EEM32413.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228791238|gb|EEM38851.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228817218|gb|EEM63306.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228848531|gb|EEM93379.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228855831|gb|EEN00375.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|326943127|gb|AEA19023.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 358

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ +   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LKDAKAMLEEKLDAEMRDMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|313891751|ref|ZP_07825356.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
 gi|313119745|gb|EFR42932.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
          Length = 359

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 190/344 (55%), Gaps = 15/344 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   L  K  DP + +N  + +   +E   L   ++  ++ +         LE+  +++ 
Sbjct: 12  RYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVFETKNAALEILNDKNQ 71

Query: 82  CSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWANML 137
             + +   ++L+  + E+E  + +  LL    D ND+    LE+ AG GG E+  +   L
Sbjct: 72  EELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAALFVADL 131

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           L+MY ++AE RK++   +++++ +  G +     I G NAY  LK E GVHR+ RI   +
Sbjct: 132 LKMYLKFAEHRKWRCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQRIPETE 191

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S+ R HTS  ++ V P  +D ++IEIS+ D R+D YRASGAGGQH+N T SA+RITH+PT
Sbjct: 192 SSGRVHTSAVTVAVLPEAED-VDIEISKEDIRVDVYRASGAGGQHINKTSSAIRITHLPT 250

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV CQ ER Q +N+ +A  +L+A+LY+  L+K +  +   ++ K ++G G    +IR+
Sbjct: 251 GIVVTCQNERDQRQNREKAMQILKARLYDEALRKTK--SETAQNRKEQVGSGDRSERIRT 308

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDL----DDFMKATLAIK 354
           Y   P   + D R  +        ++G +    D  ++A L +K
Sbjct: 309 YNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEADLNLK 351


>gi|255324516|ref|ZP_05365633.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298422|gb|EET77722.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
          Length = 358

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 168/285 (58%), Gaps = 15/285 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132
           E+A E+ D    QE +D L++    +E K  + L    E DS D  +E+ AGAGG E+  
Sbjct: 66  EMAYEDHD---FQEEADRLEKSVENLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAAL 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQGV 187
           +A  L RMY R+A+K  F  E L +++ +  G+K  T+    K P+   A+   K E GV
Sbjct: 123 FAGDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306
           SAVRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A  GE   +++ 
Sbjct: 243 SAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVR 300

Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                 +IR+Y   P   + D R   +  +   VL+GD++D +KA
Sbjct: 301 TMDRSERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKA 344


>gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1134

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/321 (38%), Positives = 181/321 (56%), Gaps = 23/321 (7%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--K 96
           VIEA   +     L    S +K ++D   +   L ELA   D+  I +   + L+ I  K
Sbjct: 572 VIEANKELARLDPLVKQYSMVKSLRD---ERESLDELARTSDEKDITELAREELRAIDAK 628

Query: 97  LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           L  +      +L    D++D  A LEV AGAGG E+  +A  L RMY   A K  ++ E 
Sbjct: 629 LPEQEHALRIMLLPRDDADDRGAILEVRAGAGGDEAALFAAELFRMYALHARKSGWRFET 688

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L + + +  GI+  +  + G   +G LK E GVHR+ R+   ++  R HTS +S+ V P 
Sbjct: 689 LNMSETDGKGIREGSAEVLGDGVFGRLKFESGVHRVQRVPETETQGRVHTSTASVAVLPH 748

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + ++++I + D RI+T RASGAGGQHVNTT+SAVR+TH+PTG+ V  Q ERSQHKNKA
Sbjct: 749 AAE-VDMDIRDEDVRIETMRASGAGGQHVNTTNSAVRLTHLPTGITVAIQDERSQHKNKA 807

Query: 275 QAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           +A+++L+++LY++E   RE++AN   E   + IG G    ++R+Y   P   VKD R + 
Sbjct: 808 KAFSVLKSRLYDME---REKLANERAELRSSLIGTGDRSEKVRTYNF-PQGRVKDHRVDG 863

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
                   + GD+  FM   L
Sbjct: 864 N-------VSGDIKGFMDGFL 877


>gi|269794320|ref|YP_003313775.1| peptide chain release factor 1 [Sanguibacter keddieii DSM 10542]
 gi|269096505|gb|ACZ20941.1| bacterial peptide chain release factor 1 (bRF-1) [Sanguibacter
           keddieii DSM 10542]
          Length = 361

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 147/247 (59%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LE+ AG GG ES  +A  LLRMY R+AE+R +KTE +E  + +  G K   + +
Sbjct: 103 DGRDVILEIKAGEGGEESALFAGDLLRMYLRYAERRGWKTEVIEATESDLGGYKDVQVAV 162

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K      P    W  LK E GVHR+ R+   +S  R HTS + + V+P V+D+ E+EI +
Sbjct: 163 KAKGTVAPEDGPWANLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVEDAGELEIDQ 222

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L 
Sbjct: 223 NDLRIDVYRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLL 282

Query: 286 ELELQKREEIAN-IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               ++    AN I  S    +    +IR+Y   P   + D RT  +  +   VLDGDL+
Sbjct: 283 AARQEEEAAAANDIRRSQVRTVDRSERIRTYNY-PENRIADHRTGYKSYNLDQVLDGDLE 341

Query: 345 DFMKATL 351
             +++ +
Sbjct: 342 PVVRSAI 348


>gi|257453431|ref|ZP_05618726.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
 gi|257449183|gb|EEV24131.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
          Length = 364

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/224 (43%), Positives = 137/224 (61%), Gaps = 9/224 (4%)

Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D ND   A+LE+ AG GG E+  ++  L RMY R+A  + ++ E L  ++GE  G K   
Sbjct: 108 DPNDKVPAFLEIRAGTGGDEAAIFSGDLFRMYERYAATQGWQVEVLSENEGEHGGYKEII 167

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             + G   YG LK E G HR+ R+   +S  R HTS  ++ V P V+    ++I+ +D R
Sbjct: 168 SRVSGTGVYGRLKFESGAHRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVDINPADLR 227

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDTYRASGAGGQH+N TDSAVRITHIPTG VV+CQQERSQH N+ +A  ML +K+ + ++
Sbjct: 228 IDTYRASGAGGQHINKTDSAVRITHIPTGTVVECQQERSQHANRDKAMKMLVSKIQQEKV 287

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           QK  +I    +  +  +G G    +IR+Y   P   + D R N+
Sbjct: 288 QK--QIDASSDMRRNLVGSGDRSERIRTYNF-PQGRMTDHRINL 328


>gi|229076544|ref|ZP_04209504.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
 gi|229099762|ref|ZP_04230687.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|229105922|ref|ZP_04236546.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|229118825|ref|ZP_04248174.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228664626|gb|EEL20119.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228677496|gb|EEL31749.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|228683651|gb|EEL37604.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|228706577|gb|EEL58790.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
          Length = 358

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 184/350 (52%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ D   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LRDAKAMLEDKLDADMREMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEITIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|91762346|ref|ZP_01264311.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718148|gb|EAS84798.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 357

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 7/247 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  +A +E+ AG GG E+  +A  L +MY + + ++K++ E + +   E  G+K    
Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIA 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I+G N Y  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++I+I++SD RI
Sbjct: 165 SIRGKNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDIKINDSDLRI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +RA G GGQ VNTTDSAVRITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  
Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERS 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E      E  K++IG G    +IR+Y   P   V D R N+        L+G+  D M
Sbjct: 284 RIE--GERSEDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEM 340

Query: 348 KATLAIK 354
              L ++
Sbjct: 341 VENLTLQ 347


>gi|78221601|ref|YP_383348.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
 gi|119361544|sp|Q39YQ1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78192856|gb|ABB30623.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           metallireducens GS-15]
          Length = 355

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG ES  +A  L RMY+R+AE+ ++K E +   + E  G K    LI
Sbjct: 103 DDRNVILEIRAGTGGDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   +  LK E G HR+ R+   ++  R HTS  ++ V P  +D IEI+I+  D +ID 
Sbjct: 163 EGQAVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAED-IEIDINPVDLKIDV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITH+PTG+VV+CQ ERSQ KN+++A  +L++++  L+  ++
Sbjct: 222 YRASGAGGQHVNKTESAVRITHLPTGIVVECQDERSQIKNRSKAMKVLKSRI--LDGLQQ 279

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A I    K ++G G    +IR+Y   P   + D R  +       +++GD+ + + +
Sbjct: 280 EQNARIAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDALMEGDIAEVVDS 338

Query: 350 TLA 352
             A
Sbjct: 339 LRA 341


>gi|56808306|ref|ZP_00366070.1| COG1186: Protein chain release factor B [Streptococcus pyogenes M49
           591]
          Length = 214

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 135/214 (63%), Gaps = 2/214 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           + ++ L     +P    + I A+   +E   L         +Q+   +  +LLE+ L+ED
Sbjct: 3   EEIALLENHMTEPDFXNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRM
Sbjct: 62  D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  
Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
           RRHTSF+S+ V P +DD+IE+E+ + D ++DT++
Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFQ 214


>gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1]
 gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1]
          Length = 355

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+ AG GG E+  +A  L RMY ++A ++ ++ E + +   E  G K     
Sbjct: 103 ADAKPAMLEIRAGTGGDEAALFAGDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIVAN 162

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  D+ ++++I   D +ID
Sbjct: 163 VSGQGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPDE-VDVQIDPGDLKID 221

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQHVNTTDSA+RITH PTG+VV CQ  RSQHKN+ +A  +LRA+LYE   + 
Sbjct: 222 TYRASGAGGQHVNTTDSAIRITHEPTGLVVTCQDGRSQHKNREKAMQVLRARLYE---KT 278

Query: 292 REEIANI-GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346
           R+E      E+ K  +G G    +IR+Y   P   V D R  +      +VL G  LD+ 
Sbjct: 279 RDEAQGAEAEARKAMVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHKLEEVLAGPGLDEL 337

Query: 347 MKATLA 352
           + A +A
Sbjct: 338 VDALIA 343


>gi|229826190|ref|ZP_04452259.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
 gi|229789060|gb|EEP25174.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
          Length = 357

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/333 (35%), Positives = 182/333 (54%), Gaps = 35/333 (10%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIK-------EIQDRLCDNLILLELALEEDDCSI 84
           DP+ ++N      LM+E+  L   +   K       +I+D  C     L +  EE D  +
Sbjct: 27  DPNKFRN------LMKEQSDLQPIVEKYKAYKANNEQIED--C-----LRMISEESDPEL 73

Query: 85  LQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRM 140
            +   + L   K  V E+++   +L    D ND     +E+ AG GG E+  +A+ L RM
Sbjct: 74  KELAREELAEAKAAVPEFEKELKVLLLPKDKNDDKNVIVEIRAGTGGDEAAIFASELYRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y ++AE  ++K E L  ++    G K  T LI G  A+  LK E G HR+ R+   +SN 
Sbjct: 134 YCKYAENNRWKPEILSFNENGLGGFKEVTFLINGKGAFSKLKYESGTHRVQRVPVTESNG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +  TS +++ + P  ++ +++ I  +D + D +RASG GGQ VNTTDSAVR+THIPTG+V
Sbjct: 194 KLQTSAATVAILPEAEE-VDVNIDPNDIKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIV 252

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQK--REEIANIGESSKTEIGWG---RQIRSY 315
           + CQ E+SQ KNK +A  +LR++LYELE +K   EE AN     K+++G G    +IR+Y
Sbjct: 253 ISCQDEKSQLKNKDKAMKVLRSRLYELECEKAHAEEAAN----RKSQVGSGDRSEKIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              P   V D R      +   V+ GDL + ++
Sbjct: 309 NF-PQGRVTDHRIKFTTHNIDGVMGGDLTEIIE 340


>gi|222149911|ref|YP_002550868.1| peptide chain release factor 1 [Agrobacterium vitis S4]
 gi|254790856|sp|B9JT13|RF1_AGRVS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221736893|gb|ACM37856.1| peptide chain release factor 1 [Agrobacterium vitis S4]
          Length = 359

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/300 (36%), Positives = 169/300 (56%), Gaps = 26/300 (8%)

Query: 74  ELALEEDDCSILQ-----ETSDNLQRIKLEVEYKQFESLLSG-------------EADSN 115
           EL L E + + L+     +++D   R   E+E    E+ L G              AD  
Sbjct: 51  ELGLAEKEVADLKALLADKSTDREMRDLAEMELPDVEARLEGLEKEIQIQLLPKDAADEK 110

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A LE+ AG GG+E+  +A  L RMY R+A  + +K E L   +G+  G K     + G 
Sbjct: 111 SAILEIRAGTGGSEAALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIATVTGR 170

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             +  LK E GVHR+ R+   ++  R HTS +++ V P  ++ I+IE+   D RIDT R+
Sbjct: 171 GVFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEE-IDIEVRAEDIRIDTMRS 229

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A+A  +LR++L+++E Q+ +  
Sbjct: 230 SGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHQNRAKAMQVLRSRLFDMERQRAD-- 286

Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +      K+++G G    +IR+Y   P   V D R N+       ++ G++D+ + A +A
Sbjct: 287 SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALIA 345


>gi|47570471|ref|ZP_00241104.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228988555|ref|ZP_04148642.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158891|ref|ZP_04286948.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|47552867|gb|EAL11285.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228624502|gb|EEK81272.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|228771172|gb|EEM19651.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 358

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ +   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|15839238|ref|NP_299926.1| peptide chain release factor 1 [Xylella fastidiosa 9a5c]
 gi|20139358|sp|Q9PA71|RF1_XYLFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9107880|gb|AAF85446.1|AE004071_14 peptide chain release factor 1 [Xylella fastidiosa 9a5c]
          Length = 361

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 145/239 (60%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMYTR+AE++++K E      GE  G K     I
Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  D+  +I I+ +D +IDT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+PTGVVV+ Q ERSQH N+ +A   L+A+L E E  + 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESE--RS 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347
           ++      + K ++G G   ++IR+Y   P   + D R  N+      ++++GDLD  +
Sbjct: 285 QQATAEAMTRKLQVGSGDRSQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 342


>gi|223938118|ref|ZP_03630015.1| peptide chain release factor 1 [bacterium Ellin514]
 gi|223893162|gb|EEF59626.1| peptide chain release factor 1 [bacterium Ellin514]
          Length = 359

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 190/350 (54%), Gaps = 26/350 (7%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS----FIKEIQDRLCDNLIL 72
           D   +R S +     DP  ++N    + L +E   L   ++    ++K + D L +N  L
Sbjct: 8   DKFARRFSEVEASLSDPKAFENAQRFQELSKEYSRLKGLVAGGSAYLKAVAD-LEENKTL 66

Query: 73  L-------ELAL-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           L       E+AL  +++ + L+E    ++++ LEV   Q   L     DS +  +E+ AG
Sbjct: 67  LAAEPADSEMALMAKEEVTRLEEV---VKKLGLEV---QAGVLPPDPTDSRNTIVEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG+ES  +A  L RMYTR+AE + +K E+++    +  G K     I G + Y  LK E
Sbjct: 121 AGGSESALFAADLYRMYTRYAESQGWKVESIDASPSDLGGFKEVIFGITGSDVYKRLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   ++  R HTS  ++ V P  ++ ++I+I   D  +D  RASG GGQ VN
Sbjct: 181 SGVHRVQRVPATEAQGRIHTSTCTVAVLPEAEE-VDIDIRPEDLSVDRCRASGKGGQGVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIP+G++V C  ERSQHKNKA+A  +LR++L  LE +  +E A      K 
Sbjct: 240 TTDSAVRLHHIPSGLIVYCADERSQHKNKAKAMTVLRSRL--LEKKIADENAKYAAQRKE 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++G G    +IR+Y   P   V D R  +   +    ++G++D  ++  +
Sbjct: 298 QVGTGERNERIRTYNF-PQNRVTDHRIEVTLYNLPTFVEGEIDSIIEPLM 346


>gi|114569197|ref|YP_755877.1| peptide chain release factor 1 [Maricaulis maris MCS10]
 gi|119361557|sp|Q0ARZ8|RF1_MARMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114339659|gb|ABI64939.1| bacterial peptide chain release factor 1 (bRF-1) [Maricaulis maris
           MCS10]
          Length = 357

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/291 (40%), Positives = 168/291 (57%), Gaps = 15/291 (5%)

Query: 72  LLELA--LEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEAD-SNDAYLEVHAGA 125
           L ELA  +E DD  + +   +    +K    E+E+     LL  + D S +A +E+ AG 
Sbjct: 58  LAELAEMMEGDDAEMAEMAREEFYALKERLPELEHAMSLMLLPKDKDDSANAMIEIRAGT 117

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L  MY R+A+ + +  E +   +GE  G K     I G   +G LK E 
Sbjct: 118 GGDEAAIFAGNLYGMYQRYAQLQGWSWELVSASEGEHGGYKEVVAAISGNGVFGRLKFES 177

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS +++ + P  +D I+IE+   D R+DT RASGAGGQHVN 
Sbjct: 178 GVHRVQRVPATESQGRIHTSAATVAIMPQPED-IDIELDMGDVRVDTMRASGAGGQHVNK 236

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTG+VV C QE+SQH+N+A+A  +L+AKLY  ++Q+    A      K +
Sbjct: 237 TDSAVRMTHIPTGLVVVC-QEKSQHQNRARAQEILKAKLY--DMQREAANAERAAERKGQ 293

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           IG G    +IR+Y   P   V D R N+      D++ GD LD+ + A +A
Sbjct: 294 IGSGDRSERIRTYNY-PQGRVSDHRINLTLYKLDDIVAGDGLDEVVAALIA 343


>gi|260906196|ref|ZP_05914518.1| peptide chain release factor 1 [Brevibacterium linens BL2]
          Length = 359

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 142/238 (59%), Gaps = 4/238 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ DA +E+ AG GG ES  +A  LLRMY RW + R + ++ L+    +  G K  TL +
Sbjct: 106 DARDAIIEIKAGEGGDESALFAGDLLRMYQRWIDSRGWSSQILDATHSDLGGYKDVTLAL 165

Query: 173 KGPN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           K  +  AYGW+K E GVHR+ R+   +S  R HTS + + V+P VD+  E+ + ++D RI
Sbjct: 166 KAKDDGAYGWVKFEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVALDDNDLRI 225

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELEL 289
           D YR+SG GGQ VNTTDSAVRITH+PTG+   CQ E+SQ +NK  A  MLRA+ L +   
Sbjct: 226 DVYRSSGPGGQSVNTTDSAVRITHVPTGITASCQNEKSQLQNKEAALRMLRARILAKQAE 285

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +   E A+I  S    +    +IR+Y   P   + D RT  +  +   VL G+LD  +
Sbjct: 286 EAAAEAADIRRSQVRTVDRSERIRTYNF-PENRITDHRTGYKAYNLDQVLAGELDPVI 342


>gi|71275264|ref|ZP_00651551.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|170731262|ref|YP_001776695.1| peptide chain release factor 1 [Xylella fastidiosa M12]
 gi|238687964|sp|B0U5Z3|RF1_XYLFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71164073|gb|EAO13788.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|167966055|gb|ACA13065.1| peptide chain release factor 1 [Xylella fastidiosa M12]
          Length = 361

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 145/239 (60%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMYTR+AE++++K E      GE  G K     I
Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  D+  +I I+ +D +IDT
Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+SA+RITH+PTGVVV+ Q ERSQH N+ +A   L+A+L E E  + 
Sbjct: 227 FRSSGAGGQHVNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESE--RS 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347
           ++      + K ++G G   ++IR+Y   P   + D R  N+      ++++GDLD  +
Sbjct: 285 QQATAEAMTRKLQVGSGDRSQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 342


>gi|293375558|ref|ZP_06621832.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325836776|ref|ZP_08166243.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
 gi|292645775|gb|EFF63811.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325491154|gb|EGC93443.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
          Length = 354

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 191/347 (55%), Gaps = 11/347 (3%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+   A+ +R   +N    DP +  ++ +   L +E++ L+  ++   E ++       
Sbjct: 1   MFERLEAILERYEKINEMMADPAIVTDIKKLTELSKEQRGLEETVNVYTEYKNIASSIED 60

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGT 128
           L E+A + D + S + E      + +L    +Q E LL      D  +  +E+   AGG 
Sbjct: 61  LKEMAKDSDPEISEMAEMELEELKPRLPELEQQLEILLIPKDPNDEKNVIVEIRGAAGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ L RMYT++AE + +K + + +   E  G+     +I G + +  +K E G H
Sbjct: 121 EANIFASDLYRMYTKYAELKGWKIQVMNVDYSESGGMSQVEFMISGESVFSHMKYESGAH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P  +D ++IE+S +D R+DT+ +SG GGQ VNTT S
Sbjct: 181 RVQRVPATESQGRIHTSTATVLVMPEAED-VDIEVSMNDIRVDTFCSSGPGGQSVNTTKS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV CQ  +SQH+NKA A  +L+A++Y+  LQ+R E    GE  +++IG 
Sbjct: 240 AVRLTHVPTGIVVSCQDGKSQHENKANALKVLKARIYDSILQERLEAE--GEERRSKIGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   V D R          V++G L+  ++A + 
Sbjct: 298 GERSEKIRTYNY-PQNRVTDHRIGFTIQQLDRVMEGKLEPVIEALIT 343


>gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
 gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
          Length = 361

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/260 (42%), Positives = 154/260 (59%), Gaps = 9/260 (3%)

Query: 98  EVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           E+E K Q   L   EAD  +A LEV AG GG E+  +A  L  MY R+A    ++ EA++
Sbjct: 95  ELERKVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLHGWRFEAMD 154

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           + +    G K AT  I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  +
Sbjct: 155 VSETGIGGYKEATANITGRGVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAE 214

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + ++I I E D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKNKA+A
Sbjct: 215 E-VDIHIDEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDEKSQHKNKAKA 273

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LY+ E  + E+ A      K ++G G    +IR+Y   P   V D R N+   
Sbjct: 274 LKVLRARLYDRE--RAEKDAARAADRKNQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 330

Query: 334 SPSDVLDGD-LDDFMKATLA 352
               V+ G+ LD+ + A +A
Sbjct: 331 KIDKVMAGEALDELVDALVA 350


>gi|257439051|ref|ZP_05614806.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
 gi|257198541|gb|EEU96825.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
          Length = 356

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 186/331 (56%), Gaps = 28/331 (8%)

Query: 32  DPHLWQNVI----EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS--IL 85
           DP L++ ++    EA+ +++  Q L  A       QD L     LLE    + D    + 
Sbjct: 23  DPALFRRLMQEYHEAEPVVQAYQALTTA-------QDHLAQAKALLEGETLDPDFKEMVQ 75

Query: 86  QETSDNLQRI-KLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141
           QE  +  Q + +LE   K    +L    D ND     +E+  GAGG E+  +A+ L+RMY
Sbjct: 76  QEIGEKSQEVAQLENNLK----ILLLPKDVNDDKSVIMELRGGAGGEEAALFAHSLMRMY 131

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           T + + R ++ E L +++ E  G+K A L + G  AY  LK E GVHR+ R+   ++  R
Sbjct: 132 TMYVQSRGWELEVLNLNETELGGVKEAILAVNGAGAYNRLKYESGVHRVQRVPETETQGR 191

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P  ++ +++ I   D RIDT+R+SGAGGQH+N T SA+R+THIPTG+VV
Sbjct: 192 IHTSTATVAVMPQAEE-VDLVIDPKDLRIDTFRSSGAGGQHINKTSSAIRVTHIPTGMVV 250

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
           +CQ ERSQ +NK +A  +LR++L  L  +++E+   I  +   ++G G    +IR+Y   
Sbjct: 251 ECQNERSQFQNKDKALEVLRSRL--LAQKQKEQQDAINANRAGQVGTGDRSEKIRTYNF- 307

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           P     D R  +   +   ++DG+LD+ + A
Sbjct: 308 PQDRCTDHRIGLTVHNLDKIMDGNLDEIIDA 338


>gi|154500225|ref|ZP_02038263.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
 gi|150270957|gb|EDM98231.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
          Length = 355

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 149/242 (61%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +AN L RMY+ +AE R +K E   +++ E  GIK  +  +
Sbjct: 103 DGKNVIVEIRAGVGGEEAALFANSLYRMYSMYAETRHWKVEVASLNETELGGIKEISFTV 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS  ++ V P  ++ ++++I+ +D  +  
Sbjct: 163 EGGGAYSRLKFESGVHRVQRVPETESGDRIHTSTVTVAVLPEAEE-VDVDINPADIEMQV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQH+N T SAVR+ H PTG+VV+CQQERSQ +N+ +A  +LR++LYE E Q+ 
Sbjct: 222 FRSSGAGGQHINKTSSAVRLIHKPTGMVVECQQERSQFQNRDKAMQILRSRLYEAEQQRV 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A   E  ++++G G    +IR+Y   P   + D R  +      DV++GDLD+ + +
Sbjct: 282 S--AEWSEERRSQVGTGMRNERIRTYNF-PQGRLTDHRIGLTLYKLEDVMNGDLDEIIDS 338

Query: 350 TL 351
            +
Sbjct: 339 LI 340


>gi|154687816|ref|YP_001422977.1| peptide chain release factor 1 [Bacillus amyloliquefaciens FZB42]
 gi|154353667|gb|ABS75746.1| PrfA [Bacillus amyloliquefaciens FZB42]
          Length = 359

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 184/339 (54%), Gaps = 13/339 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77
           QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D   +LE  L
Sbjct: 13  QRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLADAKAMLEEKL 72

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           + D   +++E    LQ  + E   ++ + LL      D  +  +E+   AGG E+  +A 
Sbjct: 73  DADMREMVKEEISELQG-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G HR+ R+  
Sbjct: 132 NLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYENGAHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+
Sbjct: 192 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 250

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +I
Sbjct: 251 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGSGDRSERI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R  +       +L+G LD+ ++A +
Sbjct: 309 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 346


>gi|149914649|ref|ZP_01903179.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
 gi|149811442|gb|EDM71277.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
          Length = 351

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/248 (41%), Positives = 148/248 (59%), Gaps = 14/248 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +AD+  A LE+  G GG E+  +A  LLRMY R+AE R +  E +E ++ E  GIK    
Sbjct: 100 KADARPAILEIRPGTGGEEAALFAGDLLRMYHRYAEARGWSFEIIEQNETELGGIKEVIA 159

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G + +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++++I   D RI
Sbjct: 160 RVAGDHVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDVQIDPGDLRI 218

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q
Sbjct: 219 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQ 277

Query: 291 KREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +  +       A +G   ++E     +IR+Y   P   + D R N+       V+ GDLD
Sbjct: 278 RAADERSASRAAQVGTGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLD 331

Query: 345 DFMKATLA 352
           + + A  A
Sbjct: 332 EVIDALRA 339


>gi|154246564|ref|YP_001417522.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
 gi|226739122|sp|A7IIM2|RF1_XANP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154160649|gb|ABS67865.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
          Length = 360

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 172/316 (54%), Gaps = 13/316 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD----NLILLELALEEDDCSILQETSDNLQ-RIKLEV 99
           L RE   L   +  ++ ++D   D    N +L E A + +   + +   + LQ RI+   
Sbjct: 35  LGREFSDLSPVVEQVRALKDAERDLEGANELLAESAADPEMREMAEAEVERLQDRIEALA 94

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
              +   L     D     LEV AG GG E+  +A  L RMYTR+A ++ +  E L   +
Sbjct: 95  TAVRLALLPKDAMDERGIILEVRAGTGGDEAALFAGDLYRMYTRYAAEKGWSVEILSESE 154

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G   G K     + G  AY  LK E GVHR+ R+   +++ R HTS +++ V P  +D +
Sbjct: 155 GTMGGYKEIVAALHGRGAYARLKFESGVHRVQRVPATETSGRIHTSAATVAVLPEAED-V 213

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +++I+E+D RID YRA GAGGQHVN T+SAVRITH+PT  VV  Q ERSQH+NKA+A  +
Sbjct: 214 DVDINEADLRIDVYRAQGAGGQHVNKTESAVRITHLPTNTVVAVQDERSQHRNKARAMAL 273

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           LRA+L + E QK+E  A      K ++G G    +IR+Y   P   V D R N+      
Sbjct: 274 LRARLLDDERQKKE--AGRAAERKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLD 330

Query: 337 DVLDGD-LDDFMKATL 351
           +V+ G  LD+ +   L
Sbjct: 331 EVIAGTALDEIIDPLL 346


>gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761553|ref|ZP_04759640.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81598182|sp|Q5NMC7|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241373861|gb|EER63394.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 358

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 148/245 (60%), Gaps = 8/245 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +   LLRMY+R+AE+  ++ E +     E  G K   + 
Sbjct: 106 ADERSAILEIRAGTGGDEAALFGGDLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVIS 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I E D RID
Sbjct: 166 ITGAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDVDIDERDLRID 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +R+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQHKNKA+A  +LRA+LYE E ++
Sbjct: 225 IFRSSGPGGQSVNTTDSAVRITHIPSGIVVSQQDEKSQHKNKAKAMKVLRARLYERE-RE 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           R      G+  K+ +G G    +IR+Y   P   V D R N+      ++L G  LD+ +
Sbjct: 284 RLHSERAGQ-RKSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILAGPGLDEVI 341

Query: 348 KATLA 352
            A +A
Sbjct: 342 SALIA 346


>gi|283850912|ref|ZP_06368198.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
 gi|283573835|gb|EFC21809.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
          Length = 357

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 11/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMY R+AE R++K E +   +    G K     I
Sbjct: 105 DDKNILLEIRAGTGGEEAALFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ + P  ++ +++ I  +D RID 
Sbjct: 165 AGDKVYSRLKYESGAHRVQRVPATESQGRIHTSAVTVAIMPEAEE-VDVAIDPNDLRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVR+TH+P+G+VV CQ E+SQHKNKA+A  +LR++L ++E +K+
Sbjct: 224 YRSSGPGGQSVNTTDSAVRVTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQ 283

Query: 293 --EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             E+ A    + ++++G G    +IR+Y   P   V D R N+       VL+GDLD+  
Sbjct: 284 RLEQEA----TRRSQVGTGDRSERIRTYNF-PQSRVTDHRINLTLYRLEAVLEGDLDELC 338

Query: 348 KATLA 352
           +  +A
Sbjct: 339 EGLIA 343


>gi|255348385|ref|ZP_05380392.1| peptide chain release factor 1 [Chlamydia trachomatis 70]
 gi|255502926|ref|ZP_05381316.1| peptide chain release factor 1 [Chlamydia trachomatis 70s]
 gi|255506595|ref|ZP_05382234.1| peptide chain release factor 1 [Chlamydia trachomatis D(s)2923]
 gi|289525068|emb|CBJ14538.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           Sweden2]
 gi|296434608|gb|ADH16786.1| peptide chain release factor 1 [Chlamydia trachomatis E/150]
 gi|296438326|gb|ADH20479.1| peptide chain release factor 1 [Chlamydia trachomatis E/11023]
          Length = 359

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/337 (36%), Positives = 186/337 (55%), Gaps = 19/337 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE---LA 76
           ++RL  +  +  DP+++ N  E   L +E   L    S IK   + L     +L+   LA
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARL----SEIKNAHESLVATKKILQDDKLA 64

Query: 77  LE-EDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND--AYLEVHAGAGGTESQ 131
           L  E D  I+    + +   +  VE+  KQ E+LL      +D    +E+ AG GG E+ 
Sbjct: 65  LSTEKDPEIVAMLEEGVLVGEEAVEHLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ 
Sbjct: 125 LFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAV
Sbjct: 185 RVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S+  ++G G 
Sbjct: 245 RITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
              +IR+Y   P   V D R  +   +   V++G+LD
Sbjct: 303 RSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELD 338


>gi|306835871|ref|ZP_07468866.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
 gi|304568236|gb|EFM43806.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
          Length = 358

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/285 (39%), Positives = 166/285 (58%), Gaps = 15/285 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132
           E+A E+ D    QE +D L     E+E K  + L    E DS D  +E+ AGAGG E+  
Sbjct: 66  EMAYEDHD---FQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAAL 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQGV 187
           +A  L RMY R+A+K  FK E L +++ +  G+K  T+    K P    A+   K E GV
Sbjct: 123 FAGDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306
           SAVRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A  GE   +++ 
Sbjct: 243 SAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVR 300

Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                 ++R+Y   P   + D R   +  +   VL+GD+ D +KA
Sbjct: 301 TMDRSERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKA 344


>gi|319942226|ref|ZP_08016542.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
 gi|319804279|gb|EFW01171.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
          Length = 358

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG ES  +A  LLRMY R+AE   ++TE +  ++ E  G K   + I
Sbjct: 108 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS  ++ V P +D+  E++++ +D RID 
Sbjct: 168 IGRGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+  TDSAVRITH+PTG+VV+CQ ERSQ +NKA+A  +L ++LY  ++ ++
Sbjct: 228 FRASGAGGQHIQKTDSAVRITHLPTGMVVECQDERSQTQNKARAMAVLASRLYAQQVAEQ 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E        K  IG G    +IR+Y   P   V D R N+       +++GDL++ + A
Sbjct: 288 HE--REASERKNLIGSGDRSERIRTYNY-PQGRVTDHRINLTLYRLEAIMNGDLEEIITA 344


>gi|258542227|ref|YP_003187660.1| peptide chain release factor 1 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633305|dbj|BAH99280.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636364|dbj|BAI02333.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639417|dbj|BAI05379.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642473|dbj|BAI08428.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645528|dbj|BAI11476.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648581|dbj|BAI14522.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651634|dbj|BAI17568.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654625|dbj|BAI20552.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 352

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 148/241 (61%), Gaps = 7/241 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LEV   AGG E+  +A  L  MY R+A+   ++   ++  + E  G++     
Sbjct: 101 ADARSAILEVRPAAGGDEAGLFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAE 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   +S  R HTS  ++ V P  ++ +++E++E+D R+D
Sbjct: 161 INGKGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVEVNETDLRVD 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASGAGGQHVN T+SAVR+TH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LYE E  +
Sbjct: 220 VFRASGAGGQHVNKTESAVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERE--R 277

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  AN     ++++G G    +IR+Y   P   V D R N+       V+ G+LD+F+ 
Sbjct: 278 AQAHANRAADRRSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVD 336

Query: 349 A 349
           A
Sbjct: 337 A 337


>gi|227501694|ref|ZP_03931743.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
 gi|227077719|gb|EEI15682.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
          Length = 352

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/286 (39%), Positives = 167/286 (58%), Gaps = 17/286 (5%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQ 131
           E+A E+ D    QE +D L     E+E K    LL+   E DS D  +E+ AGAGG E+ 
Sbjct: 60  EMAYEDHD---FQEEADRLAASVEELEEK-LADLLAPRDEQDSEDIIMEIKAGAGGEEAA 115

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGP---NAYGWLKGEQG 186
            +A  L RMY R+A+K  FK E L +++ +  G+K  T+    K P    A+   K E G
Sbjct: 116 LFAGDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGG 175

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTT
Sbjct: 176 VHRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTT 235

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A  GE   +++
Sbjct: 236 DSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQV 293

Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                  ++R+Y   P   + D R   +  +   VL+GD+ D +KA
Sbjct: 294 RTMDRSERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKA 338


>gi|148656981|ref|YP_001277186.1| peptide chain release factor 1 [Roseiflexus sp. RS-1]
 gi|148569091|gb|ABQ91236.1| bacterial peptide chain release factor 1 (bRF-1) [Roseiflexus sp.
           RS-1]
          Length = 364

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/330 (35%), Positives = 182/330 (55%), Gaps = 16/330 (4%)

Query: 33  PHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
           P +  + +  +  +RE++ L+    A    ++++ ++ D   LL    + +   + QE  
Sbjct: 26  PEIATDPVRLQQYVREQRDLEPLVEAYQAYRDVERQIEDTRFLLANETDPEVRQLAQEEL 85

Query: 90  DNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           D+L  +R +LE + K    L     DS +  +E+  G GG E+  +A  L RMYTR+AE+
Sbjct: 86  DHLIERRARLETDIKVL-LLPRDPNDSKNVIMELRQGEGGDEAALFAADLFRMYTRYAEQ 144

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R +  + +   +    G K     IKG  AY  LK E GVHR+ R+   ++  R HTS +
Sbjct: 145 RGWDVDVISATENGPGGYKEIVFEIKGEGAYSRLKYEGGVHRVQRVPATEARGRIHTSTA 204

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQ 264
           ++ V P ++++ EIE++ SD R+D +R+SG GGQ VNTTDSAVRI +    P  +VV CQ
Sbjct: 205 TVAVLPEIEET-EIELNPSDYRVDVFRSSGHGGQGVNTTDSAVRIVYKPGTPEEIVVTCQ 263

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
             RSQ KNKA A  +LRA+LY  E +KR +   +GES   ++G G    +IR+Y   P  
Sbjct: 264 DSRSQLKNKASALAVLRARLYAREEEKRRK--ELGESRLAQVGAGERAEKIRTYNF-PQD 320

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            V D R     ++   +LDGDLD  + A +
Sbjct: 321 RVTDHRIGQNFSNLPGILDGDLDRLIDALI 350


>gi|331674376|ref|ZP_08375136.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
 gi|331068470|gb|EGI39865.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
          Length = 184

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/183 (49%), Positives = 117/183 (63%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           E P +W     A+ L +ER  L+  +  + +++  L D   LLELA+E DD     E   
Sbjct: 2   EQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVA 61

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R F
Sbjct: 62  ELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGF 121

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           KTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS  
Sbjct: 122 KTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAV 181

Query: 211 VYP 213
            YP
Sbjct: 182 CYP 184


>gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
 gi|259585220|sp|C4XIQ1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
          Length = 357

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/273 (38%), Positives = 158/273 (57%), Gaps = 8/273 (2%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           + Q  +  L+  ++E+E +    LL  +  D  +  LE+ AG GG E+  +A  L RMYT
Sbjct: 75  LAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGDEAALFAGDLFRMYT 134

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+AE +++K E +   +    G K     I G   Y  LK E G HR+ R+   +S  R 
Sbjct: 135 RYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAHRVQRVPATESQGRI 194

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  ++ + P  ++ +++ I  ++ RID YR+SG GGQ VNTTDSAVR+THIP+G+VV 
Sbjct: 195 HTSAVTVAIMPEAEE-VDVAIDPNELRIDVYRSSGPGGQSVNTTDSAVRVTHIPSGLVVI 253

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
           CQ E+SQHKNKA+A  +LR++L ++E  K+   A    + ++++G G    +IR+Y   P
Sbjct: 254 CQDEKSQHKNKAKALKVLRSRLLQVEQDKQR--AEQEAARRSQVGTGDRSERIRTYNF-P 310

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              V D R N+       VL+GDLD+   A + 
Sbjct: 311 QGRVTDHRINLTLYRLDAVLEGDLDELCGALIG 343


>gi|167750775|ref|ZP_02422902.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|167656210|gb|EDS00340.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|291530723|emb|CBK96308.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum 70/3]
 gi|291557765|emb|CBL34882.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum V10Sc8a]
          Length = 358

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 189/343 (55%), Gaps = 17/343 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD----NLILLELA 76
           +R   +N K  D ++  +  + K LM+E ++L   I   +  +    D      +L +  
Sbjct: 10  KRFDEINEKLTDINVINDQEQYKSLMKELKNLTPIIEKYRMYKTARSDFEEAEQMLSDGG 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133
           L++D   I+QE  ++ +  KL  EY     +L    D +D     +E+  GAGG E+  +
Sbjct: 70  LDKDFKEIVQEQYESNK--KLMDEYTDELKILLLPKDPDDDRNVIIEIRGGAGGEEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           AN + RMY+ +A+ + +KTE +  +  E  G K  +  ++G   Y  LK E GVHR+ R+
Sbjct: 128 ANSMFRMYSMYAQTKGWKTEVISSNPTELGGYKEISFSVEGEGVYAKLKYESGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R  TS  ++ V P V++ +++EI+ +D    TYR+SGAGGQH+N T+SA+RI 
Sbjct: 188 PETEAQGRIQTSTITVAVLPEVEE-VDVEINPADLEFQTYRSSGAGGQHINKTESAIRII 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H PTGVVV+CQ+ERSQ+KNK +A  ML +KLYE +L   E+ + I    K ++G G    
Sbjct: 247 HHPTGVVVECQEERSQYKNKDKAMKMLYSKLYEAKLN--EQNSKIAAERKIQVGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IR+Y   P   V D R  +        ++GD D+   A LAI
Sbjct: 305 RIRTYNY-PQSRVTDHRIGLTLYKLEQFMNGDCDEVFDA-LAI 345


>gi|289643112|ref|ZP_06475242.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
 gi|289507076|gb|EFD28045.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
          Length = 356

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 182/339 (53%), Gaps = 22/339 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L ++  DP +  +   A+ L R    L  A+   +E+     D     E A E  D S  
Sbjct: 15  LESRLADPSVHADPALARSLGRRYAELTPAVETARELDRVAADLATAREFAAE--DTSFR 72

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA------DSNDAYLEVHAGAGGTESQDWANMLLR 139
            E ++      LE E +   + L          D+ DA LE+ AGAGG ES  +A  LLR
Sbjct: 73  AEVAE------LEAEQETLRNRLRAHLVPTDPDDARDAILEIKAGAGGEESALFAGDLLR 126

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRLVRIS 194
           MY R+AE+R ++TE L+ +  +  G +  ++ +K         +G L+ E GVHR+ R+ 
Sbjct: 127 MYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKAGRGASEGVFGRLRFEGGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS + + V P   D +E++I  +D RID YR+SG GGQ VNTTDSAVRITH
Sbjct: 187 VTESAGRIHTSAAGVLVLPEAAD-VEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAVRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIR 313
           +P+G+VV CQ E+SQ +NK  A  +LRA+L  +  ++ +  A+   +S+   +    ++R
Sbjct: 246 LPSGLVVSCQNEKSQLQNKESALRILRARLLSVARERAQAEASAARASQVRTVDRSERVR 305

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y     + + D R   +  +   VLDG+LDD + A +A
Sbjct: 306 TYNFAENR-ISDHRVGYKAYNLDQVLDGELDDVLNALIA 343


>gi|189502103|ref|YP_001957820.1| peptide chain release factor 1 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692309|sp|B3ES89|RF1_AMOA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189497544|gb|ACE06091.1| hypothetical protein Aasi_0702 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/261 (40%), Positives = 156/261 (59%), Gaps = 8/261 (3%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           LQ+ +LE + K F  L     DS +  LE+ AG GG E+  +A  L RMY+R+AEK ++K
Sbjct: 86  LQKTQLEEDLK-FLLLPKDPNDSKNVILEIRAGTGGDEAGIFAGDLFRMYSRFAEKMQWK 144

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +E  +    G K     I G  AYG LK E GVHR+ R+   ++  R HTS +S+ V
Sbjct: 145 LSIIEEVESTSGGYKEIICSIAGEGAYGMLKYESGVHRVQRVPATETQGRIHTSAASVVV 204

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D+ +E+++  +D R DT+ +SG GGQ VNTT SA+R+THIPTG+VV CQ E+SQ K
Sbjct: 205 LPEMDE-VEVDLDMNDIRKDTFCSSGPGGQSVNTTYSAIRLTHIPTGIVVSCQDEKSQIK 263

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328
           N  +A  +LRA+LYE EL+K+++   IG   ++ +  G    +IR+Y   P   V D R 
Sbjct: 264 NLEKALKVLRARLYEQELKKQQD--AIGAERRSMVKSGDRSDKIRTYNF-PQGRVTDHRI 320

Query: 329 NIEKTSPSDVLDGDLDDFMKA 349
                +   V+DG + D ++A
Sbjct: 321 GYTIHNLPAVMDGAVGDLIEA 341


>gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
 gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
          Length = 356

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 182/334 (54%), Gaps = 14/334 (4%)

Query: 25  FLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEE 79
           FL+ + E  DP ++ +    + L +    L   +   +   E++  L DN  LL  A + 
Sbjct: 12  FLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLADNQELLNDA-DP 70

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLL 138
           D   +  E   +++    E+E+     LL  +  D  +  LE+ AG GG E+  +   L 
Sbjct: 71  DIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGEEAALFGGDLF 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+AEK  +K E +   + +  G K    LI G   Y  LK E G HR+ R+   +S
Sbjct: 131 RMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTHRVQRVPATES 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ + P  ++ +++++   D R D YR+SG GGQ VNTTDSAVR+THIPTG
Sbjct: 191 QGRIHTSAATVAIMPEAEE-VDLDLKPEDLRFDVYRSSGPGGQSVNTTDSAVRVTHIPTG 249

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV CQ E+SQHKNKA+   +L ++L  L++++ E+ A + +  + ++G G    +IR+Y
Sbjct: 250 LVVCCQDEKSQHKNKAKGLKILCSRL--LQMKQDEQNAALADQRRAQVGTGDRSERIRTY 307

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              P   V D R N+   S   VL+G++ + + A
Sbjct: 308 NF-PQGRVTDHRINLTLYSLGKVLEGEIQELVDA 340


>gi|294101724|ref|YP_003553582.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
 gi|293616704|gb|ADE56858.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
          Length = 358

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 185/340 (54%), Gaps = 30/340 (8%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  N+ E + L ++   +++A+   +E +    D        LEE   S+L
Sbjct: 17  LEKQMSDPVVAANLKEIQQLAKKHAQIESAVLKYREYKKVKSD--------LEEAH-SLL 67

Query: 86  QETSDNLQRIKLEVEYKQFESLLSG----------EADSND---AYLEVHAGAGGTESQD 132
                ++Q +  E E K+ E LL              D ND     +E+  GAGG E+  
Sbjct: 68  HSGDGDMQELARE-EIKEKEPLLECIRDELHVLLLPVDPNDEKSVIMEIRGGAGGEEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+ E+  ++ E ++ ++    G+K     I G  AY  LK E GVHR+ R
Sbjct: 127 FSANLYRMYSRFCEREGWRIEIIQSNETGIGGLKEVIFKIDGRGAYSKLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS S++ V P V+D ++++I   D +IDTYR+SGAGGQHVN TDSAVRI
Sbjct: 187 VPMTEAGGRIHTSTSTVAVLPEVED-VDVDIRTEDLKIDTYRSSGAGGQHVNMTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ ERSQ KN+A+A   LRAKLY LE +K+ E     E  + +IG G   
Sbjct: 246 THLPTGIVVTCQDERSQIKNRAKAMMYLRAKLYGLEKEKQAEEQA--EERRGQIGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +IR+Y   P   + D R  +        LDGDL + + A
Sbjct: 304 ERIRTYNY-PQNRITDHRIGLTLYKLDQYLDGDLYEMIDA 342


>gi|305664895|ref|YP_003861182.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
 gi|88707725|gb|EAQ99965.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
          Length = 358

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 143/232 (61%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  L RMYT++ E R +KT  +++ +G   G K     +
Sbjct: 106 DAKDVVVEIRAGTGGDEASIFAGDLFRMYTKYCEGRGWKTNVIDLSEGTSGGYKEIQFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +++ V P  +D  +++I   D RID 
Sbjct: 166 SGADVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIDPKDVRIDF 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL ++
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKDKAFRVLRSRLYDLELARK 284

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +E      +S+   G    +IR+Y     + V D R  +      ++++GD+
Sbjct: 285 QEEDAAKRNSQVSSGDRSAKIRTYNYAQGR-VTDHRIGLTLYDLQNIINGDI 335


>gi|229828875|ref|ZP_04454944.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
 gi|229792038|gb|EEP28152.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
          Length = 357

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 187/352 (53%), Gaps = 20/352 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  +  +P +  +  +   LM+E+  L   +   +  Q +      
Sbjct: 1   MFDKLEDLVARYEEIMRQIAEPDIASDGAKFTELMKEQSELAPIVETFRAYQKQKQSIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND---AYLEVHAGAG 126
            LEL   E D  + Q   + L   +   E    Q + LL  + DSND     +E+  GAG
Sbjct: 61  SLELLDAESDEEMRQLAKEELAEARASAEELENQLKVLLLPK-DSNDDRNVIIEIRGGAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  + RMY  +AE R +  E +E+ +    G+K    +++G  AY  LK E G
Sbjct: 120 GDEAALFAAEVYRMYRHYAESRGWACEVMELEETGIGGMKKINFMVRGRGAYSTLKYESG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P   + +++ I  +D RID  RASG GGQ VNTT
Sbjct: 180 VHRVQRVPATESGGRIHTSTVTVAVMPEAQE-VDVVIDPADIRIDVMRASGNGGQCVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGE 300
           DSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY +E+ +++E      +A IG 
Sbjct: 239 DSAVRLTHYPTGIVIYSQTEKSQLQNKNKAFALLRAKLYTMEMLRQQEEASARRLAQIGS 298

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             ++E     +IR+Y   P   V D R N+       +L+GDL + + A +A
Sbjct: 299 GDRSE-----KIRTYNF-PQGRVTDHRINLTLYKLDKILNGDLQELLDALMA 344


>gi|224541463|ref|ZP_03682002.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525621|gb|EEF94726.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
          Length = 358

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  ++ +     +E+  L+ A +  KE +  L D +   +  L E+D  I +     
Sbjct: 24  DPSIANDIQKMTQASKEQASLEKAYNLYKEYK-ALLDGIEEAKELLNENDPEIKEMAKME 82

Query: 92  LQRIKLE---VEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           L+ ++ +   +E+  Q E +     D  +  +E+   AGG E   +A  L RMY+++AE 
Sbjct: 83  LEELEKKQPIMEHDIQIELIPKDPNDEKNVVMEIRGAAGGDEGNIFAGDLFRMYSKYAES 142

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + +K E  +    E  G    + +IKG   Y  +K E G HR+ R+   ++  R HTS +
Sbjct: 143 QGWKIEIEDAQPSEAGGYSLISFIIKGNGVYSKMKFESGSHRVQRVPKTETQGRVHTSTA 202

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P  ++ ++I+I   D RIDTYR+SGAGGQH+N TDSAVRITHIPTG+V   Q  R
Sbjct: 203 TVLVMPEAEE-VDIDIDPKDLRIDTYRSSGAGGQHINKTDSAVRITHIPTGIVATSQDGR 261

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQH N+A+A   LR ++YE +L  REE   +G   + +IG G    +IR+Y   P   V 
Sbjct: 262 SQHDNRAKAMQSLRTRVYEAKL--REEEEKLGNERRNKIGSGDRAEKIRTYNY-PQNRVT 318

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R  +       +++G L+  + A +
Sbjct: 319 DHRIGLTIQQLDRIMEGKLEPIIDALI 345


>gi|30265352|ref|NP_847729.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42784501|ref|NP_981748.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47530891|ref|YP_022240.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|222098801|ref|YP_002532859.1| peptide chain release factor 1 [Bacillus cereus Q1]
 gi|46576768|sp|Q81JX1|RF1_BACAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214595|sp|Q630R9|RF1_BACCZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214623|sp|Q6HAV4|RF1_BACHK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214641|sp|Q72XC2|RF1_BACC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790861|sp|B9IRW2|RF1_BACCQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30260030|gb|AAP29215.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42740433|gb|AAS44356.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47506039|gb|AAT34715.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|221242860|gb|ACM15570.1| peptide chain release factor 1 [Bacillus cereus Q1]
          Length = 355

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              +LE  L+ +   +++E    L+    E    +   +L    D ND     +EV   A
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E 
Sbjct: 119 GGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ VNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  
Sbjct: 238 TMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 341


>gi|163803384|ref|ZP_02197260.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
 gi|159172846|gb|EDP57688.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
          Length = 193

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 121/179 (67%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  
Sbjct: 1   MWNEPERAQALGKERASLEAIVETIVQLEQGVEDVEGLLELAVEEEDQETFDEIEPELAE 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E 
Sbjct: 61  LEGKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEV 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
           +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP
Sbjct: 121 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYP 179


>gi|332637164|ref|ZP_08416027.1| peptide chain release factor 1 [Weissella cibaria KACC 11862]
          Length = 361

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 14/341 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   ++    DP +  +      L +E   L   +   K  +D + D +   E  L E
Sbjct: 12  VDRYDEISEMISDPDVISDTQRFMALSKEEGSLRETVETFKRYKD-VVDGIEGNEEMLNE 70

Query: 80  D--DCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +   D L+ +K E E   +Q + LL      D  +  +E+H  AGG E   +
Sbjct: 71  GLGDAELEEMAKDELKELKAEKETLEEQIKILLLPKDPNDDKNIIMEIHGAAGGDEGALF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L  MY R+AEK+ +  E ++ +  E  G K   L+I G N Y  LK E G HR+ R+
Sbjct: 131 AADLYDMYQRYAEKQGWNVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENGAHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P  +D ++IEI + D R+D YR+SGAGGQHVN T SAVR+T
Sbjct: 191 PETESAGRVHTSTATVGVMPEYED-VDIEIEDKDLRVDVYRSSGAGGQHVNKTSSAVRMT 249

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV  Q +RSQ +N+A+A  +L+A++Y+    + E  A   E  KT +G G    
Sbjct: 250 HLPSGIVVAMQDQRSQQQNRAKALEILKARVYDYYASQNE--AEYAEQRKTAVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G+L+D + A +
Sbjct: 308 RIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALI 347


>gi|260888149|ref|ZP_05899412.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|330840016|ref|YP_004414596.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|260862178|gb|EEX76678.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|329747780|gb|AEC01137.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
          Length = 355

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/335 (35%), Positives = 189/335 (56%), Gaps = 15/335 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDC 82
           L +   DP +  ++ + + L RE   L   +   +E   +++ L +   + +   + D  
Sbjct: 15  LESLISDPAVLADMPKWQKLSREHAQLAPVVEKYREYKKVREGLLEAKAIFDDNPDADMR 74

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLR 139
            + +E    L R +LE   ++   LL  + D NDA    +E+  G GG E+  +A  L R
Sbjct: 75  RLAEEEIAEL-RPRLEALERELPILLLPK-DPNDAKNVIVEIRGGVGGEEAALFAGDLFR 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+AE+R ++ + ++ +  E  G K     + G  AY +LK E G HR+ R+   +S+
Sbjct: 133 MYARYAERRGWRVDVIDKNATEIGGFKEIAFSVDGAGAYSFLKYESGTHRVQRVPVTESS 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P  +  +E+EI+ +D RIDTY ASGAGGQ+VN T++A+RITH+PTG+
Sbjct: 193 GRIHTSAVTVAVLPEAE-EVEVEIAPADLRIDTYCASGAGGQYVNRTETAIRITHLPTGI 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VVQCQ E+SQ KNK +A  +LRA++  LE  + E+ A +    K+++G G    +IR+Y 
Sbjct: 252 VVQCQDEKSQLKNKEKAMRVLRARI--LEAAREEQAATVAADRKSQVGSGDRSERIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   V D R  +     + VLDGDLD+ + A +
Sbjct: 310 F-PQGRVTDHRIGLTLHKLAAVLDGDLDELLAALI 343


>gi|194699680|gb|ACF83924.1| unknown [Zea mays]
          Length = 174

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           LLSG  D   A + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIK
Sbjct: 4   LLSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIK 63

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISE 225
           SAT+ ++G  AYG+L GE+G HR+VR SP+++   R TSF+ + V P++ ++S+ ++I E
Sbjct: 64  SATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPE 123

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
            D  I   RA G GGQ+VN  ++AVR+ HIPTG+ V+C
Sbjct: 124 EDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRC 161


>gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421]
 gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421]
          Length = 371

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/335 (35%), Positives = 180/335 (53%), Gaps = 27/335 (8%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + +DP L +NV   K +MR  QH      ++ ++ D   D  +  E  L+E    + +E+
Sbjct: 33  EVQDPDLVKNVARYKDVMR--QH-----GYLSKLMDEY-DFYLQTEKQLQEAHALMQEES 84

Query: 89  SDNLQRIKLEVEYKQFESLLSGEAD------------SNDAYLEVHAGAGGTESQDWANM 136
              L+ +  E  +   + L   EAD              +  +E+  G GG E+  +A  
Sbjct: 85  DHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIMEIRGGTGGDEAALFAAD 144

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L +MYT +AE + +  E ++ ++ E  G K     I G   YG L+ E GVHR+ R+   
Sbjct: 145 LFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGSLRYESGVHRVQRVPET 204

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           + + R HTS  ++ V P  +++ EI I   D R+D  RA G GGQ VNTTDSAVR+THIP
Sbjct: 205 EGSGRIHTSAVTVAVLPEAEET-EIVIKPEDLRVDVMRAGGPGGQSVNTTDSAVRLTHIP 263

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K+ +     ++ K+++G G    +IR
Sbjct: 264 TGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQ--ERAQNRKSQVGSGDRSERIR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +Y   P   V D R N+       VL GDLD+ ++
Sbjct: 322 TYNF-PQNRVTDHRINLTLYQLDAVLQGDLDEIIE 355


>gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 360

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 194/350 (55%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   + V R   LN    DP +  +  +   L +E   L + ++  K+ Q    +L D
Sbjct: 4   IFDKLQSVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVSKQLDD 63

Query: 69  NLILLELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125
           +  +L   +++D  +++++  TS   ++ KLE + K    LL  +  D  +  +E+H  A
Sbjct: 64  DKEMLREKIDDDLEAMVKDEITSLTDEKDKLEDQMKVM--LLPKDPNDDKNIIMEIHGAA 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E   +A  L  MY+++AE++ +K E ++ ++ E  G K   L+I G   Y  LK E 
Sbjct: 122 GGDEGSLFAADLFSMYSKYAERQGWKVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYEN 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P  +D ++I+I   D R+D YR+SGAGGQH+N 
Sbjct: 182 GAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHINK 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+TH+PTG+VV  Q ERSQ +N+ +A  +L+A++Y+   Q+ ++  N     K+ 
Sbjct: 241 TSSAVRMTHLPTGIVVAMQDERSQQQNRQKAMKILKARVYDYYAQQEQDQYNA--ERKSA 298

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IG G    +IR+Y   P   V D R  +       +++G+LD+ + A + 
Sbjct: 299 IGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 347


>gi|237750909|ref|ZP_04581389.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
 gi|229373354|gb|EEO23745.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
          Length = 356

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/321 (37%), Positives = 175/321 (54%), Gaps = 25/321 (7%)

Query: 45  LMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           L +E+   D  ++  KE   + D +  N  LLE      D  + +   + L+  +LE+  
Sbjct: 35  LSKEKSESDEIVAKAKEYLKVLDDITSNKALLE------DKELGELAKEELK--ELEIAQ 86

Query: 102 KQFE---SLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           K  E    +L    D ND    YLE+ AG GG E+  +   L   Y R+A+ +++K E +
Sbjct: 87  KNLEDEIKILLIPKDPNDKKNIYLEIRAGTGGDEAGIFVGDLFSAYCRYADSKQWKVEII 146

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
              +    G K    L+KG  AY  LK E G HR+ R+   +S  R HTS  ++ + P V
Sbjct: 147 SSSENSVGGYKEMIALVKGDGAYSRLKYEGGTHRVQRVPKTESQGRIHTSAITVAIMPEV 206

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D S+EI I+ +D +ID +R+ G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNK +
Sbjct: 207 D-SLEININPNDLKIDVFRSGGHGGQSVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDK 265

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A  +L+A+LYE EL+ +   A   ES K ++G G    +IR+Y   P   + D R N+  
Sbjct: 266 ALKILQARLYEAELEAQN--AQNRESRKNQVGSGDRSERIRTYNY-PQNRMSDHRINLTL 322

Query: 333 TSPSDV-LDGDLDDFMKATLA 352
            S  ++ L GDLD  +   +A
Sbjct: 323 YSLEEIMLSGDLDKVIDPLIA 343


>gi|296116158|ref|ZP_06834776.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977264|gb|EFG84024.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 353

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 144/242 (59%), Gaps = 7/242 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD   A LE+   AGG E+  +A  +   Y R+A++R ++ E LE  + E  G++    
Sbjct: 101 EADDRSAILEIRPAAGGDEAALFAGQMFGAYQRYADQRGWRFEILEYDESELGGLREGIA 160

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +  LK E GVHR+ R+   +S  R HTS  ++ V P  ++ +++EI+++D RI
Sbjct: 161 SITGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVEINDNDLRI 219

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D YRASGAGGQHVN T+SAVRITH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LYE    
Sbjct: 220 DVYRASGAGGQHVNKTESAVRITHMPSGIVVAMQEEKSQHKNRAKAMKILRARLYERNRA 279

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              E        ++++G G    +IR+Y   P   V D R  +       V+ G+ D+F+
Sbjct: 280 AAHE--TRAADRRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDKVMGGEFDEFV 336

Query: 348 KA 349
            A
Sbjct: 337 DA 338


>gi|149907580|ref|ZP_01896327.1| peptide chain release factor 1 [Moritella sp. PE36]
 gi|149809250|gb|EDM69179.1| peptide chain release factor 1 [Moritella sp. PE36]
          Length = 362

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/336 (35%), Positives = 190/336 (56%), Gaps = 29/336 (8%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-----------NLILLELALEED 80
           +P +  +    + L +E   L+  +S  KE QD   D           +  + E+A+EE 
Sbjct: 25  EPEIISDQDRYRALTKEYSQLEELVSCFKEYQDAKEDFESAEEMLKDEDPDMREMAVEE- 83

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
                +E+   + R+  E+E      L     DSN+ +LE+ AGAGG E+  +A  L RM
Sbjct: 84  ----YKESKATVARVSDELEVLL---LPRDPNDSNNCFLEIRAGAGGDEAAIFAGDLYRM 136

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AEK+ ++   + + + ++ G K   + ++G   +G +K E G HR+ R+   +S  
Sbjct: 137 YSRYAEKKGWRLTIMNLSNSDQGGYKEVIVKMEGEAVFGTMKFESGGHRVQRVPETESQG 196

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P V +   I I+ +D ++DT+RASGAGGQHVN TDSAVRITHIPTG V
Sbjct: 197 RIHTSACTVVVMPEVPEVDAIVINTADLKVDTFRASGAGGQHVNKTDSAVRITHIPTGTV 256

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIGWG---RQIRSY 315
           V+CQ ERSQHKN+A+A ++L+A++   E +K    A + E S  ++ +  G    +IR+Y
Sbjct: 257 VECQDERSQHKNRARAMSILQARIQAAEDEK----ARLEEESTRRSLVASGDRSERIRTY 312

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              P   V D R N+     ++V++G+LD  ++  +
Sbjct: 313 NY-PQGRVSDHRINLTLYRLNEVMEGELDVLIQPII 347


>gi|159044282|ref|YP_001533076.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
 gi|189039970|sp|A8LLU7|RF1_DINSH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157912042|gb|ABV93475.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
          Length = 351

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A +E+  G GG E+  +A  LLRMY R+AE + ++ + +     E  GIK     
Sbjct: 101 ADARPAMIEIRPGTGGEEAALFAGDLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAH 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  + +++I+I  SD RID
Sbjct: 161 VSGSGVFAKLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAE-AVDIDIPASDIRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITHIPTG+VV    E+SQH+N+  A  +LRA+LY+LE Q+
Sbjct: 220 TMRASGAGGQHVNTTDSAVRITHIPTGLVV-TSSEKSQHRNRDIAMQVLRARLYDLERQR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  A    + K ++G G    +IR+Y   P   + D R N+       V+ GDLD+ + 
Sbjct: 279 AD--AERSAARKGQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIA 335

Query: 349 ATLA 352
           A  A
Sbjct: 336 ALAA 339


>gi|49188164|ref|YP_031417.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49480414|ref|YP_039322.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140231|ref|YP_086598.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118480364|ref|YP_897515.1| peptide chain release factor 1 [Bacillus thuringiensis str. Al
           Hakam]
 gi|165871326|ref|ZP_02215975.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167636684|ref|ZP_02394972.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170688145|ref|ZP_02879356.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|170709368|ref|ZP_02899781.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|177651841|ref|ZP_02934424.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217962818|ref|YP_002341396.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218906507|ref|YP_002454341.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225867310|ref|YP_002752688.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227818092|ref|YP_002818101.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228917938|ref|ZP_04081474.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930337|ref|ZP_04093341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936614|ref|ZP_04099408.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949050|ref|ZP_04111322.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229094441|ref|ZP_04225513.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|229124833|ref|ZP_04254011.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|229142072|ref|ZP_04270597.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|229187555|ref|ZP_04314695.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|229199455|ref|ZP_04326118.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|229601300|ref|YP_002869544.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|254686248|ref|ZP_05150107.1| peptide chain release factor 1 [Bacillus anthracis str. CNEVA-9066]
 gi|254724243|ref|ZP_05186027.1| peptide chain release factor 1 [Bacillus anthracis str. A1055]
 gi|254735257|ref|ZP_05192966.1| peptide chain release factor 1 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744460|ref|ZP_05202140.1| peptide chain release factor 1 [Bacillus anthracis str. Kruger B]
 gi|254755798|ref|ZP_05207830.1| peptide chain release factor 1 [Bacillus anthracis str. Vollum]
 gi|254762138|ref|ZP_05213984.1| peptide chain release factor 1 [Bacillus anthracis str. Australia
           94]
 gi|301056797|ref|YP_003795008.1| peptide chain release factor 1 [Bacillus anthracis CI]
 gi|49182091|gb|AAT57467.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49331970|gb|AAT62616.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973700|gb|AAU15250.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118419589|gb|ABK88008.1| bacterial peptide chain release factor 1 (bRF-1) [Bacillus
           thuringiensis str. Al Hakam]
 gi|164712993|gb|EDR18521.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167527884|gb|EDR90706.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170125716|gb|EDS94630.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|170667838|gb|EDT18590.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|172082545|gb|EDT67609.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217065190|gb|ACJ79440.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218537315|gb|ACK89713.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225787237|gb|ACO27454.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227005978|gb|ACP15721.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228584031|gb|EEK42186.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|228595922|gb|EEK53602.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|228641361|gb|EEK97667.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|228658624|gb|EEL14286.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|228688978|gb|EEL42805.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|228810623|gb|EEM56972.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823049|gb|EEM68887.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829323|gb|EEM74956.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841735|gb|EEM86846.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229265708|gb|ACQ47345.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|300378966|gb|ADK07870.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis
           str. CI]
 gi|324329278|gb|ADY24538.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 358

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122
           L D   +LE  L+ +   +++E    L+    E    +   +L    D ND     +EV 
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK
Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ 
Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ 
Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|218296205|ref|ZP_03496961.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
 gi|218243277|gb|EED09807.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
          Length = 354

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 175/323 (54%), Gaps = 10/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP + ++    + L R    +   I+ I+E + ++ ++L  +E  LE+ +   + +    
Sbjct: 21  DPEVLKDQKRYQALSRRYAEMGEIIALIREYR-KVLEDLEGVESLLEDPELREVAKAEKE 79

Query: 92  LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
               + E   K+ E   L     D  DA +E+ AG GG E+  +A  LL MY R+AE+  
Sbjct: 80  ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ +  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEILDSNPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++S + +++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEES-DFQLNMDEVRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G    +IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRQARLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349
           R          VL G L   ++A
Sbjct: 316 RIGFTTHDLEGVLSGKLQPLLEA 338


>gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
 gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
          Length = 361

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 152/240 (63%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+++ +LEV AG GG E+  +A  L+RMY+R+AE++ ++ E L  + GE  G K   + I
Sbjct: 109 DNSNTFLEVRAGTGGDEAALFAGDLVRMYSRYAEQQNWQIEILSQNHGEHGGFKEIIMRI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y   K E G HR+ R+   +S  R HTS  ++ + P V++  EIEI+ +D R DT
Sbjct: 169 TGEGVYSRFKFESGGHRVQRVPETESQGRIHTSACTVAIMPEVEEVEEIEINNADIREDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+R+TH+PTG+V++CQ ERSQHKN+A+A ++L+A+L   E +++
Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHLPTGIVIECQDERSQHKNRARAKSLLQARLLAAERERQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348
              A   E+ +  +G G    +IR+Y   P   + D R  +      D+L  G+LDD ++
Sbjct: 289 R--AEKAETRRNLVGSGDRSERIRTYNF-PQGRITDHRIGLTLYKLDDILKQGNLDDLIE 345


>gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
 gi|212672934|gb|EEB33417.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
          Length = 356

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMYTR+AE + +K E +     +  G K    LI
Sbjct: 105 DEKNTILEIRAGTGGEEAALFAADLFRMYTRYAEIKGWKVEIMSESPSDSGGYKEIICLI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   ++  R HTS +++ V P  ++ +++EI   D RID 
Sbjct: 165 SGDRVYSHLKFEAGTHRVQRVPATETQGRIHTSAATVAVMPEAEE-VDVEIRPEDLRIDI 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITHIPTG VV CQ ERSQHKNKA+A  +L +++   E +++
Sbjct: 224 YRASGAGGQHVNKTESAVRITHIPTGTVVTCQDERSQHKNKARAMKVLASRILAAERERQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    K ++G G    +IR+Y   P     D R N+   S   +++G+++   +A
Sbjct: 284 N--SELSADRKAQVGSGDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGEVEPLFEA 340


>gi|302384870|ref|YP_003820692.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
 gi|302195498|gb|ADL03069.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
          Length = 358

 Score =  179 bits (454), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AGAGG E+  +A+ L RMY  +AE   +K E + +++    G K    +I
Sbjct: 106 DDKNIILEIRAGAGGDEAALFASELYRMYVNYAEGHHWKVELISVNENGIGGFKEVVAMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E GVHR+ R+   +S  R HTS +++ V P  ++  ++ I + D RID 
Sbjct: 166 TGKGAYSKMKYESGVHRVQRVPETESGGRIHTSTATVAVMPEAEE-FDVVIEDKDVRIDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR
Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKR 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +   +  E  +++IG G    +IR+Y   P   V D R  +       +++GD+ + + +
Sbjct: 285 QN--SEAEERRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDS 341

Query: 350 TLA 352
            +A
Sbjct: 342 LIA 344


>gi|237802457|ref|YP_002887651.1| peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT]
 gi|231273691|emb|CAX10469.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 359

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 21/343 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    NA   +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68

Query: 77  LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130
            + +  ++L+E      + ++R+      KQ E+LL      +D    +E+ AG GG E+
Sbjct: 69  KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPHPDDDLSVIMELRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+
Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSA
Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S+  ++G G
Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +IR+Y   P   V D R  +   +   V++G+LD    A
Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTA 343


>gi|227824241|ref|ZP_03989073.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226904740|gb|EEH90658.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 359

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 185/335 (55%), Gaps = 14/335 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEEDDC 82
           L  K  DP +  +  + +   +    L + +   +   ++Q    D+  LLE+   +++ 
Sbjct: 18  LEAKISDPSVISDQAQWQKYTKAHAKLTDVVETYRAYQKLQKTYDDDQALLEMGESDEEL 77

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLR 139
           + + E        +LE +Y++  ++L    D ND     +E+ AGAGG E+  +A  L R
Sbjct: 78  AAMAEMEMKELAPQLE-DYEKRLTILLLPKDPNDEKNIIMEIRAGAGGDEAALFAGDLFR 136

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTR+AE + ++ E ++       G K    ++ G + Y  +K E GVHR+ R+   ++ 
Sbjct: 137 MYTRYAETKGWRVELMDSSPTGLGGFKEVIFMVSGSDVYSHMKFESGVHRVQRVPETEAQ 196

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P  ++ ++++I  SD RIDTYRA GAGGQ+VN T+SAVR+THIPTG+
Sbjct: 197 GRIHTSTATVAVMPEAEE-VDVDIKMSDIRIDTYRAGGAGGQYVNKTESAVRMTHIPTGI 255

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           V QCQ E+SQ KN+ +   +LR+++YE   + +          ++++G G    +IR+Y 
Sbjct: 256 VAQCQDEKSQAKNREKCLRVLRSRIYEAAQEAQRAAEE--SERRSQVGTGDRSERIRTYN 313

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   V D R  +     +DV++GDLD+ + A +
Sbjct: 314 F-PQGRVTDHRIGLTLHKLTDVMNGDLDELLGALM 347


>gi|329770544|ref|ZP_08261922.1| peptide chain release factor 1 [Gemella sanguinis M325]
 gi|328836293|gb|EGF85962.1| peptide chain release factor 1 [Gemella sanguinis M325]
          Length = 362

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/339 (36%), Positives = 190/339 (56%), Gaps = 17/339 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKEIQD---RLCDNLILLE 74
           +R   LN    DP +   V + K LM   +E++ ++  +S  +E +D   ++ D   LLE
Sbjct: 12  ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVSVFREYKDIVQQINDTKELLE 68

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
           +  +++   ++QE    L+     +E +    LL  +  D  +  +EV   AGG E+Q +
Sbjct: 69  IEDDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K E G HR+ R+
Sbjct: 129 AGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S+ R HTS +++ V P  ++      +E+D R+DT+ +SGAGGQ VNTT SAVR+T
Sbjct: 189 PTTESSGRIHTSTATVVVLPEAEEVEIEI-NENDIRVDTFASSGAGGQSVNTTMSAVRLT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTGVVV  Q ERSQ KNK +A  +LRA++Y+   Q  EE A      K+++G G    
Sbjct: 248 HIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   V D R  +       +++G LD+ ++A
Sbjct: 306 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343


>gi|302392966|ref|YP_003828786.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
 gi|302205043|gb|ADL13721.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
          Length = 359

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L RMY+R+AEK+ +  + +     E  G K    ++
Sbjct: 109 DEKNVIVEIRAGTGGDEAALFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGGFKEMIFVV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S+ R HTS +++ V P  +D ++IEI+++D  I+T
Sbjct: 169 EGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAED-VDIEINQNDLTIET 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVRITH PTGVVV CQ E+SQHKNK +A  +LR+++   E  + 
Sbjct: 228 YRSSGPGGQSVNTTDSAVRITHEPTGVVVSCQDEKSQHKNKRKAMRVLRSRIQ--EKIEA 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E+ A   E  K +IG G    +IR+Y   P   + D R N+       +LDG++D+ +
Sbjct: 286 EKQAEEAEKRKMQIGSGGRSERIRTYNF-PQGRITDHRINLTTHQMESILDGEIDELV 342


>gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122252101|sp|Q01RX8|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 362

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 186/341 (54%), Gaps = 14/341 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +R   L  +  DP +  +  + + + + +  L +  +  +E + ++ D L      
Sbjct: 8   DQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWK-KVEDGLAQARPM 66

Query: 77  LEEDDCSILQETSD----NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131
           L+E D   L+E ++     L+  KL +E +    LL  +  D  +  LE+ AG GG E+ 
Sbjct: 67  LQEQDAE-LKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEAT 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE + +K E     +    G+K    L+ G   Y  LK E GVHR+ 
Sbjct: 126 LFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +   R HTS  ++ V P  D+ +E+++   D RIDT+ +SG GGQ VNTT SAVR
Sbjct: 186 RVPVTEQQGRVHTSAITVAVLPEADE-VEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KN+A+A  +LR++LYELEL+K++  A +G   +T +G G  
Sbjct: 245 ITHLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQ--AALGAERRTMVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   V D R  +       V++G +D  + A
Sbjct: 303 SEKIRTYNF-PQNRVSDHRIGLTLHQLDFVMEGKMDAIVDA 342


>gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM
           7109]
 gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
           7109]
          Length = 371

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 186/344 (54%), Gaps = 17/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +  Q L   I   + +     D+    E+
Sbjct: 21  MDDILSEYQGLEAQLADPELHNDPKAARRVGKRFQELQPVIQTYERLNTAREDHEAAAEM 80

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSN--DAYLEVHAGAGGTESQ 131
           A E  D    +E +    R++ E+E  Q     LL+     N  D  +E+ +GAGG E+ 
Sbjct: 81  ASE--DAEFAEEAT----RLEAEIEELQEKLTDLLAPRDPKNGDDIIMEIKSGAGGEEAA 134

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQG 186
            +A  L RMY R+AE+  F TE L +++ +  G+K  T+ I  K P+   A+   K E G
Sbjct: 135 LFAGELARMYQRYAERHGFATEVLGLNETDLGGVKDMTMSIRSKQPSRDGAWADFKFEGG 194

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R  TS + + VYP  D+  ++EI E D R+D YR+SG GGQ VNTT
Sbjct: 195 VHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKDIRVDVYRSSGKGGQGVNTT 254

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTGVVV CQ+ERSQ +N+A+A  +L A+L +++ ++ E  A  G +++   
Sbjct: 255 DSAVRITHLPTGVVVTCQKERSQIQNRARAMQVLAARLQQMKEEEAEAEAAEGRAAQIRT 314

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +    +IR+Y   P   V D R   +  +   VLDGDL+    A
Sbjct: 315 MDRSERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLESLFAA 357


>gi|169351467|ref|ZP_02868405.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
 gi|169291689|gb|EDS73822.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
          Length = 358

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 174/314 (55%), Gaps = 25/314 (7%)

Query: 45  LMRERQHLDNAISFIKEI---QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVE 100
           L +E + ++N I   KE+    D     +  +ELA LEE    +++         KLE+E
Sbjct: 51  LYQEYKEIENGIEEAKELAKEHDPEIKEMAKMELAELEEKLPDVIK---------KLEIE 101

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
                 +     D+ D  +E+   AGG E   +A  L RMY ++AE + +K E +E  D 
Sbjct: 102 L-----IPKDPNDNKDVIMEIRGAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMEAIDA 156

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G    + ++KG   YG LK E G HR+ R+   ++  R HTS +++ V P V++ ++
Sbjct: 157 EAGGYSLISFMVKGEGVYGKLKFESGSHRVQRVPKTETQGRVHTSTATVLVMPEVEE-VD 215

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI+++D RIDTYRASGAGGQH+N TDSAVRITHIPTG+V   Q  RSQH NK +A   L
Sbjct: 216 VEINKNDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAASQDGRSQHDNKDKAMKAL 275

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            A++Y+   Q+++    +    K+++G G    +IR+Y   P   V D R  +       
Sbjct: 276 IARIYDYYQQQQD--QQVESERKSKVGTGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDR 332

Query: 338 VLDGDLDDFMKATL 351
           +++G LDD + A +
Sbjct: 333 IIEGKLDDIITALI 346


>gi|15604741|ref|NP_219525.1| peptide chain release factor 1 [Chlamydia trachomatis D/UW-3/CX]
 gi|76788735|ref|YP_327821.1| peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13]
 gi|237804372|ref|YP_002888526.1| peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310824|ref|ZP_05353394.1| peptide chain release factor 1 [Chlamydia trachomatis 6276]
 gi|255317124|ref|ZP_05358370.1| peptide chain release factor 1 [Chlamydia trachomatis 6276s]
 gi|7388050|sp|O84026|RF1_CHLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361522|sp|Q3KMZ9|RF1_CHLTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3328413|gb|AAC67613.1| Peptide Chain Releasing Factor (RF-1) [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167265|gb|AAX50273.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           A/HAR-13]
 gi|231272672|emb|CAX09575.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|296435539|gb|ADH17713.1| peptide chain release factor 1 [Chlamydia trachomatis G/9768]
 gi|296436463|gb|ADH18633.1| peptide chain release factor 1 [Chlamydia trachomatis G/11222]
 gi|296437399|gb|ADH19560.1| peptide chain release factor 1 [Chlamydia trachomatis G/11074]
 gi|297139898|gb|ADH96656.1| peptide chain release factor 1 [Chlamydia trachomatis G/9301]
 gi|297748154|gb|ADI50700.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-EC]
 gi|297749034|gb|ADI51712.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-LC]
          Length = 359

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 21/343 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    NA   +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68

Query: 77  LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130
            + +  ++L+E      + ++R+      KQ E+LL      +D    +E+ AG GG E+
Sbjct: 69  KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+
Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSA
Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S+  ++G G
Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +IR+Y   P   V D R  +   +   V++G+LD    A
Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTA 343


>gi|255548277|ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545675|gb|EEF47179.1| peptide chain release factor, putative [Ricinus communis]
          Length = 422

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/250 (40%), Positives = 152/250 (60%), Gaps = 10/250 (4%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L + +AD  D  LEV AG GG E+  ++  + RMY R+++K+ +K E ++I + +  G K
Sbjct: 163 LPTDDADERDCILEVRAGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYK 222

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+  I G   +G LK E G+HR+ R+   + + R HTS  S+ + P  D+ +++++   
Sbjct: 223 EASAAISGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADE-VDVQLRNE 281

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+ G+GGQH NTT+SAVR+TH+PTG+ V  Q ERSQH NKA+A  +L AKLYE
Sbjct: 282 DLRIDTYRSGGSGGQHANTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYE 341

Query: 287 LELQKREEIANIGESSKTE-IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +E   R  I       ++E IG G    +IR+Y   P   V D R  I   + ++++ G+
Sbjct: 342 IE---RSRIQMSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAINNMMQGE 397

Query: 343 -LDDFMKATL 351
            LD F+ A L
Sbjct: 398 SLDVFIDALL 407


>gi|149204050|ref|ZP_01881018.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
 gi|149142492|gb|EDM30537.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
          Length = 417

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/256 (40%), Positives = 148/256 (57%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L   EAD+  A LE+  G GG E+  +   L+RMY R++E R +  E +E    E 
Sbjct: 159 QLALLPRDEADARPAILEIRPGTGGEEAALFGADLMRMYQRYSEARGWSFEVIEEQQSEL 218

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            GI+   + I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I+
Sbjct: 219 GGIRELVVRIGGEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQ 277

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+ 
Sbjct: 278 INANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLKT 336

Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LY+LE  + +        A +G   ++E     +IR+Y   P   + D R N+      
Sbjct: 337 RLYDLERNRVDSERSANRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLE 390

Query: 337 DVLDGDLDDFMKATLA 352
            VL GDLD+ + A  A
Sbjct: 391 QVLGGDLDEVIDALTA 406


>gi|309390220|gb|ADO78100.1| bacterial peptide chain release factor 1 (bRF-1) [Halanaerobium
           praevalens DSM 2228]
          Length = 360

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 154/242 (63%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMYTR+AE + +K + +  ++    G K     I
Sbjct: 112 DEKNVIVEIRAGAGGDEAALFAADLYRMYTRYAEGKGWKVDLMSANESGTGGFKEIIFTI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + + +LK E GVHR+ R+   +S+ R HTS +++ V P  ++ +++EI  +D  IDT
Sbjct: 172 EGTDIFKYLKYESGVHRVQRVPSTESSGRIHTSTATVAVLPEAEE-VDVEIETNDLTIDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSA+RITH PTG+ V CQ E+SQHKNKA+A  +LRA+L E + Q++
Sbjct: 231 FRSSGPGGQSVNTTDSAIRITHEPTGLTVSCQDEKSQHKNKAKAMKILRARLQEKKEQEK 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++  +  E+ K+++G G    +IR+Y   P   V D R N+       +LDG+L+  ++A
Sbjct: 291 QKERS--EARKSQVGTGDRSEKIRTYNF-PQGRVSDHRINLTIHQLDKILDGELEPVVEA 347

Query: 350 TL 351
            +
Sbjct: 348 LI 349


>gi|311070220|ref|YP_003975143.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
 gi|310870737|gb|ADP34212.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
          Length = 356

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/340 (34%), Positives = 184/340 (54%), Gaps = 15/340 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77
           +R   LN    DP +  +  + +   +E+  +   +   +  +D   +L D   +LE  L
Sbjct: 10  ERYERLNELLSDPEVVNDPNKLREYSKEQSDISETVEVYRRYRDASEQLADAKAMLEDKL 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134
           + +   +++E    LQ  + E    Q + LL  + D ND     +E+   AGG E+  +A
Sbjct: 70  DAEMREMVKEEISELQD-ETEAMTDQLKLLLVPK-DPNDDKNVIMEIRGAAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE + +KTE +E       G K   ++I G  AY  LK E G HR+ R+ 
Sbjct: 128 GNLYRMYSRYAELQGWKTEIMEASVTGTGGYKEIIIMINGKGAYSKLKYENGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH
Sbjct: 188 ETESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFTSSGPGGQSVNTTMSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +
Sbjct: 247 LPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQTRKSAVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R  +       +L+G LD+F+ A +
Sbjct: 305 IRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEFVDALI 343


>gi|139439315|ref|ZP_01772757.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
 gi|133775339|gb|EBA39159.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
          Length = 355

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/324 (36%), Positives = 181/324 (55%), Gaps = 12/324 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDC 82
           L  K  DP +  ++ E   L +E  H  + I+  +E    L D     E+     + D+ 
Sbjct: 15  LEKKLSDPAVASDIKEFTRLNKEYAHQSDLIAASREYIGALDDIEAAKEMLRDTTDADEK 74

Query: 83  SILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +LQ + S+N +++    E  ++  + S   D  +  +E+ + AGG E+  +A  L +MY
Sbjct: 75  EMLQMDISENEEKLPQLEEDIKYMLIPSDPNDDKNTIVEIRSAAGGDEAAIFAGDLYKMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+ E R +KT  L+    E  G KS    ++G   Y  +K E GVHR+ R+   +S  R
Sbjct: 135 QRFCESRGWKTTVLDSSPSEAGGFKSIEFKVEGDRVYSVMKFESGVHRVQRVPKTESQGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
             TS +++ V P  ++ I+++I++SD RIDTY ASG GGQ VNTT SAVRITH+PT  VV
Sbjct: 195 IQTSTATVAVLPEAEE-IDVQINQSDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
           Q Q++RSQ +N+     MLRA+LYE+EL+K++  A +G   +++IG G    +IR+Y  Q
Sbjct: 254 QSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERQSQIGHGNRSEKIRTYN-Q 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGD 342
           P   V D R     T  + VL GD
Sbjct: 311 PQDRVTDHRIGFNSTY-NGVLLGD 333


>gi|150025963|ref|YP_001296789.1| peptide chain release factor 1 [Flavobacterium psychrophilum
           JIP02/86]
 gi|166223557|sp|A6H0W3|RF1_FLAPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149772504|emb|CAL43987.1| Peptide chain release factor 1 (RF-1) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 357

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 160/265 (60%), Gaps = 8/265 (3%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           L+E  + L  ++ E+++     L+  +A D+ +  +E+ AG GG E+  +A  L RMYT+
Sbjct: 81  LEEAKERLPELEEEIKF----LLIPKDAEDAKNVMVEIRAGTGGDEASIFAGDLFRMYTK 136

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           + E R ++T  +++++G   G K     + G + YG LK E GVHR+ R+   ++  R H
Sbjct: 137 YCENRGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGVHRVQRVPQTETQGRVH 196

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P  ++  +++I  +D R+D + +SG GGQ VNTT SAVR+THIPTG+V QC
Sbjct: 197 TSAATVMVLPEAEE-FDVQIDMNDVRVDFFCSSGPGGQSVNTTKSAVRLTHIPTGLVAQC 255

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQM 322
           Q ++SQHKNK +A+ +LR++LYE EL K++    +  +S+   G    +IR+Y     + 
Sbjct: 256 QDQKSQHKNKDKAFGVLRSRLYEQELAKKQADDAVKRTSQVSSGDRSAKIRTYNYSQGR- 314

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFM 347
           V D R  ++      V++G +  F+
Sbjct: 315 VTDHRIGLDVFDMDGVMNGKIQKFV 339


>gi|312142772|ref|YP_003994218.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
 gi|311903423|gb|ADQ13864.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
          Length = 357

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 148/243 (60%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ +GAGG E+  +A  L RMY+R++E + +K E +  +     G K     +
Sbjct: 109 DEKNVIVEIRSGAGGDEAALFAADLFRMYSRYSENQGWKVEVMNANLSGVGGYKEIIFTV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y +LK E GVHR+ R+   +S+ R HTS +++ V P  ++ ++I+I  +D RID 
Sbjct: 169 EGSEVYKYLKYESGVHRVQRVPSTESSGRIHTSTATVAVLPEAEE-VDIDIDPNDLRIDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YR+SG GGQ VNTTDSAVRITH PT + V CQ E+SQHKNKA+A  +LRA++ E +E +K
Sbjct: 228 YRSSGPGGQSVNTTDSAVRITHEPTEITVSCQDEKSQHKNKAKAMRILRARVQEKIESEK 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +   A   E+ K+++G G    +IR+Y   P   V D R N+       +LDGDL   + 
Sbjct: 288 Q---AKRAEARKSQVGTGDRSEKIRTYNF-PQGRVSDHRINLTVHQLDKILDGDLAPVID 343

Query: 349 ATL 351
           A +
Sbjct: 344 ALI 346


>gi|241895238|ref|ZP_04782534.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
 gi|241871544|gb|EER75295.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
          Length = 361

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 144/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+H  AGG E   +A  L  MY R+AEK+ ++ E ++ +  E  G K   L+I
Sbjct: 110 DDKNIIMEIHGAAGGDEGALFAADLYDMYVRYAEKQGWQVEIIDENKTEIGGYKEIVLMI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS +++ V P  +D ++IEI++ D R+D 
Sbjct: 170 TGNNVYSKLKFENGAHRVQRVPETESAGRVHTSTATVGVMPEYED-VDIEIADKDLRVDV 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +L+A++Y+    + 
Sbjct: 229 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKARVYDYYASQN 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A   E  KT +G G    +IR+Y   P   V D R  +       +++G+L D + A
Sbjct: 289 E--AEYAEQRKTAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELSDVIDA 345

Query: 350 TL 351
            L
Sbjct: 346 LL 347


>gi|257461132|ref|ZP_05626230.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
 gi|257441506|gb|EEV16651.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
          Length = 355

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 183/333 (54%), Gaps = 14/333 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           + R   L+    DP +  ++     L +E++ ++    A S   +I +++ +N  LL  A
Sbjct: 10  LDRYDELSRMLSDPAITADIANMTALSKEQRSIEPIKEAASEYLKILNQIEENKALLSDA 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
              D   + +E   NL+  K ++E K    LL  +  D  + +LE+ AG GG E+  +A 
Sbjct: 70  ---DLGELAKEELKNLETQKPQLEEKIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LL  Y R+A+ R +K E +   +G   G K   LL+KG  AY  LK E G HR+ R+  
Sbjct: 127 DLLGAYLRYADLRGYKCEIVSTSEGSVGGYKEVILLVKGAGAYSRLKFEGGTHRVQRVPE 186

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P ++DS EI+I+ +D RID  R+SG GGQ VNTTDSAVRITHI
Sbjct: 187 TESQGRVHTSAITVAVMPEIEDS-EIQINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHI 245

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QI 312
           PTG+VV  Q  + QHKNK  A  +L+A+LY+++ Q+R E     +  K ++G G    +I
Sbjct: 246 PTGLVVTNQDGKDQHKNKEAAMKVLKARLYDMQEQERLEKER--KDRKDQVGTGDRSGRI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           R+Y   P   + D R N+       ++ G L D
Sbjct: 304 RTYNY-PQNRISDHRINLTLYRLDAIMAGGLFD 335


>gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
 gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
          Length = 357

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 149/239 (62%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  LE+  G GG E+  +A  L RMY R+ EK  +++  ++  +G   G K     +
Sbjct: 106 DSRNIILEIRGGTGGDEAAIFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG +K E GVHR+ R+   +S  R HTS +S+ V P  ++ ++++I+ +D RIDT
Sbjct: 166 EGEDVYGKMKFESGVHRVQRVPATESQGRIHTSAASVAVLPEAEE-VDVQINMNDVRIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +++SGAGGQ VNTT SAVR+THIP+G+VV CQ ERSQ KNK +A ++LR++LYE+EL+K 
Sbjct: 225 FQSSGAGGQSVNTTYSAVRLTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +   I    K+ +G G    +IR+Y   P   + D R      +   V++GD+ D ++
Sbjct: 285 NDA--ISSQRKSMVGSGDRSDKIRTYNY-PQSRITDHRIGYTVYNLPAVMEGDIADLIE 340


>gi|166154244|ref|YP_001654362.1| peptide chain release factor 1 [Chlamydia trachomatis 434/Bu]
 gi|166155119|ref|YP_001653374.1| peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335493|ref|ZP_07223737.1| peptide chain release factor 1 [Chlamydia trachomatis L2tet1]
 gi|238687434|sp|B0B9D0|RF1_CHLT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687452|sp|B0BB09|RF1_CHLTB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|165930232|emb|CAP03717.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           434/Bu]
 gi|165931107|emb|CAP06671.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 359

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 21/338 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    NA   +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68

Query: 77  LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130
            + +  ++L+E      + ++R+      KQ E+LL      +D    +E+ AG GG E+
Sbjct: 69  KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+
Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSA
Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S+  ++G G
Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +IR+Y   P   V D R  +   +   V++G+LD
Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELD 338


>gi|16080754|ref|NP_391582.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311662|ref|ZP_03593509.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315990|ref|ZP_03597795.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320901|ref|ZP_03602195.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325185|ref|ZP_03606479.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313251|ref|YP_004205538.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
 gi|1172909|sp|P45872|RF1_BACSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|853776|emb|CAA89884.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2636226|emb|CAB15718.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291486285|dbj|BAI87360.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019525|gb|ADV94511.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
          Length = 356

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 185/339 (54%), Gaps = 13/339 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77
           +R   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D   +LE  L
Sbjct: 10  ERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLADAKAMLEEKL 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           + +   +++E    LQ+ + E   ++ + LL      D  +  +E+   AGG E+  +A 
Sbjct: 70  DAEMRDMVKEEISELQK-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G HR+ R+  
Sbjct: 129 NLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENGAHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+
Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +I
Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGSGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R  +       +L+G LD+ ++A +
Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343


>gi|119358446|ref|YP_913090.1| peptide chain release factor 1 [Chlorobium phaeobacteroides DSM
           266]
 gi|166223545|sp|A1BJT9|RF1_CHLPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119355795|gb|ABL66666.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 357

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 196/348 (56%), Gaps = 17/348 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR------ 65
           +FD   A+ ++   L  +  DPH  ++    + L +E + L      I E  DR      
Sbjct: 1   MFDKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDL----CSIVEAYDRYALAKK 56

Query: 66  -LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHA 123
            L ++ +LL+   E+D  +++Q+   +LQ   LE E +    LL   E DS +  +E+ A
Sbjct: 57  QLEESRLLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRA 116

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLK 182
           G GG E+  +A  L+RMY R+AE++ +K E L+ ++     G +   L + G + YG +K
Sbjct: 117 GTGGEEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   ++  R HTS +S+ V P  ++ +++EI + D R DTYR+ G GGQ+
Sbjct: 177 YESGVHRVQRVPDTETQGRIHTSAASVAVLPEAEE-VDVEIRKDDLRFDTYRSGGKGGQN 235

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGES 301
           VN  ++AVRITH P+G+VV CQ+ERSQ +NK +A  MLRAKLY+ +L +++E+ A +  S
Sbjct: 236 VNKVETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGLRRS 295

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             T      +IR+Y   P   V D R      +   ++ GD+ D ++A
Sbjct: 296 MVTTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGDIKDIIEA 342


>gi|170746587|ref|YP_001752847.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
 gi|226739115|sp|B1M766|RF1_METRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170653109|gb|ACB22164.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
          Length = 361

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 176/319 (55%), Gaps = 19/319 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS------ILQETSDNLQRIKLE 98
           L RE   LD  ++ I+  +  L +NL  +E  ++E            +E  + L    LE
Sbjct: 36  LSRELSDLDPVVAAIRAYRAAL-ENLAGVEALIDEPGTDPEMRALAAEEKPEALA--ALE 92

Query: 99  VEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
             ++  + LL     AD   A LEV AG GG E+  +A  L RMY ++AE + ++ E + 
Sbjct: 93  TAHRALQLLLLPKDAADEKSAILEVRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVIS 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G   G +     +KG   +  LK E G HR+ R+   ++  R HTS +++ V P  +
Sbjct: 153 ESEGTVGGFREVVAEVKGRGVFARLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + ++I ++++D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV  Q+ERSQHKN+A+A
Sbjct: 213 E-VDIHVNDADLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVFVQEERSQHKNRARA 271

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LYE E   ++  +      K ++G G    +IR+Y   P   V D R N+   
Sbjct: 272 MALLRARLYEAERNAKD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 328

Query: 334 SPSDVLDGD-LDDFMKATL 351
              +V+ G  LD+ + A +
Sbjct: 329 KLEEVMAGTALDEVVDALI 347


>gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 360

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 149/241 (61%), Gaps = 8/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171
           D  +  +E+  GAGG E+  +A  L RMY ++ EK+  +K E +  ++ E  G K     
Sbjct: 108 DDKNVIMEIRGGAGGDEAALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFS 167

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G   YG LK E GVHR+ R+   ++  R HTS +++ V P  DD +EI++   D R+D
Sbjct: 168 VEGAGVYGKLKYESGVHRVQRVPVTEAGGRIHTSTATVAVLPEADD-VEIDLDMKDVRVD 226

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASGAGGQH+N T SAVR+TH+P+G+VV+CQ ERSQ +N+ +A  +L+A+L  L+  +
Sbjct: 227 YFRASGAGGQHINKTSSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKARL--LDQAQ 284

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +     + E+ ++++G G    +IR+Y   P   V D R N+       VL+GDLD+F++
Sbjct: 285 QAAAQEVTEARRSQVGTGDRSERIRTYNY-PQGRVTDHRINVTLYKLDAVLNGDLDEFIQ 343

Query: 349 A 349
           A
Sbjct: 344 A 344


>gi|225010612|ref|ZP_03701082.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
 gi|225005165|gb|EEG43117.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
          Length = 358

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 146/242 (60%), Gaps = 3/242 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E+  +A  L RMYT++ E R +KT  +++ +G   G K     +
Sbjct: 106 DAKNVVVEIRAGTGGDEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGYKEIQFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +++ V P  ++  +++I   D RID 
Sbjct: 166 NGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVQIDPKDVRIDF 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHLPTGLVAQCQDQKSQHKNKDKAFVVLRSRLYDMELAKK 284

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +E      +S+   G    +IR+Y   P   V D R  +      ++++GD+   +   +
Sbjct: 285 QEADAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILSELM 343

Query: 352 AI 353
            +
Sbjct: 344 LV 345


>gi|296505754|ref|YP_003667454.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
 gi|46576766|sp|Q812I4|RF1_BACCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|296326806|gb|ADH09734.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
          Length = 355

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 184/345 (53%), Gaps = 12/345 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    L+ + K   E  +   +     D  +  +EV   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 341


>gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
 gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
          Length = 357

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/348 (35%), Positives = 180/348 (51%), Gaps = 20/348 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLIL 72
            DN + R   +     DP +  +      L RE   ++      +   ++Q +L DNL L
Sbjct: 5   LDNILHRREEIAVMLADPDVTSDNKRYTALSREFSEIEPVAEEAQHYLDLQQQLADNLEL 64

Query: 73  LELALEEDDCSI-LQETSDNLQR-IKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAG 126
           +     + DC   L+E ++   R IK  +       S+L    D ND     LE+ AG G
Sbjct: 65  IA----DPDCDAELKEMAEAEAREIKQAISASDAALSMLLLPKDPNDNRDVILEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + +K E L   D    G K     I G   +   K E G
Sbjct: 121 GDEAALFAADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS  ++ + PV ++ ++I I   D RID YRASGAGGQHVN T
Sbjct: 181 AHRVQRVPETESGGRIHTSACTVAILPVAEE-VDINIRPEDLRIDVYRASGAGGQHVNKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIP+G+VV CQ + SQHKNKAQA  +L+A+L++ E  + E  A   ++ K  +
Sbjct: 240 ESAVRITHIPSGLVVTCQDQASQHKNKAQAMKVLQARLFDKE--QSELDAERSQARKGMV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G G    +IR+Y   P   + D R  +       +L GD+ + + A +
Sbjct: 298 GSGDRSERIRTYNY-PQGRITDHRIGLTLYKLEQILGGDMGELLDALI 344


>gi|253574239|ref|ZP_04851581.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846716|gb|EES74722.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 355

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 148/240 (61%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L RMYTR+A+ + ++ E +++++ +  G K    +I
Sbjct: 106 DDKNVIVEIRGAAGGDEAALFAADLYRMYTRYADSQGWRVEVMDMNESDLGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   +S  R HTS S++ V P V++ ++IEI + D R+DT
Sbjct: 166 NGKGAYSKLKYESGAHRVQRIPATESGGRIHTSTSTVAVLPEVEE-VDIEILDKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA++Y  +++++
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIY--DMKRQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A      K+++G G    +IR+Y   P   V D R  +       V++G+L++ + A
Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDQVMNGELEEIVSA 341


>gi|317473032|ref|ZP_07932332.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899461|gb|EFV21475.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 357

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/359 (35%), Positives = 197/359 (54%), Gaps = 34/359 (9%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDR----- 65
           +FD  ++ V+RL  +  +  DP +  +    + LM+E+  L   +   KE +Q++     
Sbjct: 1   MFDKLESLVERLDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60

Query: 66  ------LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--- 116
                    +  + ELA EE     L E+  N++R++ E++      +L    D ND   
Sbjct: 61  SLELLEEESDEEMKELAKEE-----LSESKANVERLEEELK------ILLIPKDPNDDKN 109

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+ AGAGG E+  +A  + RMY  +AE R++K E L  ++    G K    +I G  
Sbjct: 110 IIVEIRAGAGGDEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQG 169

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY   K E GVHR+ RI   +S  R HTS  ++ + P V+  +E+E+  +DC+ D +RAS
Sbjct: 170 AYSRFKYESGVHRVQRIPATESGGRIHTSTITVAIMPEVE-DVEVEVDLNDCKFDVFRAS 228

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ KNK +A  +LR++LYELE QK  +  
Sbjct: 229 GNGGQCVNTTDSAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAE 288

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E  K+++G G    +IR+Y   P   V D R  +       V++GDLD+ + +  A
Sbjct: 289 --AEKRKSQVGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTA 344


>gi|116515052|ref|YP_802681.1| hypothetical protein BCc_111 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285552|sp|Q057W1|RF1_BUCCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116256906|gb|ABJ90588.1| peptide chain release factor 1 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 357

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N  ++E+ A  GG E+  ++  L +MY ++A+ + +K + + +H+GE+ G K   L +
Sbjct: 107 DKNSCFIEIRAATGGHEAAIFSGDLCKMYMKYADFKSWKVDIINMHEGEKGGYKEIILKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A G LK E G HR+ R+   +S  R HTS  ++ + P V  S  I ++ SD +IDT
Sbjct: 167 IGIGACGRLKFESGGHRVQRVPQTESQGRVHTSACTVAIMPEVPKSKRIILNTSDLKIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVNTTDSAVRITH+PTG VV+CQ ERSQHKNK +A ++L AK+Y  ++   
Sbjct: 227 FRSSGAGGQHVNTTDSAVRITHLPTGCVVECQDERSQHKNKEKALSVLSAKIYS-KMNAE 285

Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +++ N     K+ +G G +    R+Y     + V D R N+     ++VL G LD  ++ 
Sbjct: 286 KKLKN-SLMRKSLLGTGERSDRNRTYNFSQNR-VTDHRINLTIYRLNEVLLGKLDLLIEP 343

Query: 350 TL 351
            L
Sbjct: 344 LL 345


>gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594]
 gi|122543160|sp|Q2N5U6|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594]
          Length = 355

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/224 (44%), Positives = 138/224 (61%), Gaps = 11/224 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+ AG GG E+  +A  L RMY R+A ++ +K E + ++  E  G K     
Sbjct: 103 ADNKPAMLEIRAGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVAN 162

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  D+ ++++I + D +ID
Sbjct: 163 VSGTGVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDE-VDVQIDDKDLKID 221

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LEL 289
            YRASGAGGQHVNTTDSAVRITH+PTG+VVQ Q ERSQHKNKA+A  +LR +LY+   E 
Sbjct: 222 IYRASGAGGQHVNTTDSAVRITHLPTGIVVQQQDERSQHKNKAKAMQVLRTRLYDHLREQ 281

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            + EE A    + K  +G G    +IR+Y   P   V D R  +
Sbjct: 282 SQGEEAA----ARKAMVGSGDRSERIRTYNF-PQGRVTDHRIGL 320


>gi|319787948|ref|YP_004147423.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466460|gb|ADV28192.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
          Length = 360

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 145/239 (60%), Gaps = 7/239 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMY R+AE++ +K E    + GE  G K     I
Sbjct: 107 DEGNLFLEVRAGTGGDEAALFAGDLFRMYARYAERQGWKVEVESDNPGEHGGHKEIVARI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ + P  D+  EI I+ +D ++DT
Sbjct: 167 VGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIEEITINPADLKVDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN TDSA+RITH+P+G+VV+ Q ERSQH N+ +A   L+A+L + E  K+
Sbjct: 227 FRSSGAGGQHVNKTDSAIRITHLPSGLVVESQTERSQHANRDKAMKRLKAQLLDAERSKQ 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347
           +  A   ES + ++G G   ++IR+Y   P   + D R   +      ++L+GDLD  +
Sbjct: 287 Q--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILEGDLDPLV 342


>gi|313113834|ref|ZP_07799401.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623861|gb|EFQ07249.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 363

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 189/345 (54%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72
            D    R   L+ +   P    +    + LMRE    +  +   +     QD L     L
Sbjct: 8   MDAVCHRFEELSIRLNQPDTAADPALFRRLMREYHDAEPVVQAYRAWQTAQDHLAQAKAL 67

Query: 73  LEL--ALEEDDCSILQ-ETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
           LE   AL+ D   ++Q E S+  Q + KLE   K    LL  +  D  +  +E+  GAGG
Sbjct: 68  LEEPGALDPDFKQMIQQEISEKSQDVEKLENNLKIL--LLPKDVNDGKNVIVEIRGGAGG 125

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ LLRMYT + + R ++ E L +++ E  G+K A   + G  AY  LK E GV
Sbjct: 126 EEAALFAHSLLRMYTMYVQSRGWQLEMLNLNETELGGVKEAIFSVDGAGAYNRLKYESGV 185

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++ ++  +   D RIDT+R+SGAGGQH+N T 
Sbjct: 186 HRVQRVPETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKTS 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+R+TH+PTG+VV+CQ ERSQ +NK +A  +LR++L  L  +++++   I  S + ++G
Sbjct: 245 SAIRVTHLPTGMVVECQNERSQFQNKDKALEILRSRL--LAQKQKQQQDAINASRQGQVG 302

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    +IR+Y   P     D R  +   + S ++DG+LD+ + A
Sbjct: 303 TGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLSKIMDGNLDEVIDA 346


>gi|227832889|ref|YP_002834596.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262182622|ref|ZP_06042043.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790875|sp|C3PFQ4|RF1_CORA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|227453905|gb|ACP32658.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 358

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 189/346 (54%), Gaps = 17/346 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +     +  +  DP +  +  + + L +    L   ++  +E+     D     E+A
Sbjct: 9   DDIISEYQGIEMQMADPEVAGDQSQFRKLSKRYAELRPIVAVNEELVQARQDLADAKEMA 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWA 134
            E+ +    Q   D L+ + +++E +Q   LL+   E DS D  +E+ AGAGG E+  +A
Sbjct: 69  YEDHE---FQSEVDRLEPLVVQLE-EQLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGVHR 189
             L RMY R+A+K  F+ E L +++ +  G+K  ++  K        A+   K E GVHR
Sbjct: 125 GDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRIQTSAAGVLVYPEPEEIDSVNIDDKDIRVDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--- 306
           VRITH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A  GE   +++   
Sbjct: 245 VRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVRTM 302

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   + D R   +  +   VLDGD+ D ++A  A
Sbjct: 303 DRSERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMQDLIEALQA 347


>gi|30023360|ref|NP_834991.1| peptide chain release factor 1 [Bacillus cereus ATCC 14579]
 gi|206970257|ref|ZP_03231210.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218236058|ref|YP_002370106.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228924065|ref|ZP_04087341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955577|ref|ZP_04117579.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961593|ref|ZP_04123202.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229051000|ref|ZP_04194549.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|229072796|ref|ZP_04205995.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|229082544|ref|ZP_04215007.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|229112743|ref|ZP_04242276.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|229130579|ref|ZP_04259535.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|229147870|ref|ZP_04276211.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|229153493|ref|ZP_04281671.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|229181577|ref|ZP_04308903.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|229193581|ref|ZP_04320525.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|29898921|gb|AAP12192.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus cereus
           ATCC 14579]
 gi|206734834|gb|EDZ52003.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218164015|gb|ACK64007.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228589886|gb|EEK47761.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|228601945|gb|EEK59440.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|228630097|gb|EEK86748.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|228635520|gb|EEK92009.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|228652918|gb|EEL08800.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|228670724|gb|EEL26035.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|228700976|gb|EEL53499.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|228710287|gb|EEL62262.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|228722377|gb|EEL73773.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|228798075|gb|EEM45079.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804105|gb|EEM50722.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228835555|gb|EEM80920.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 358

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 185/348 (53%), Gaps = 12/348 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+ + K   E  +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344


>gi|224437763|ref|ZP_03658710.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313144209|ref|ZP_07806402.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313129240|gb|EFR46857.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
          Length = 354

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/236 (42%), Positives = 142/236 (60%), Gaps = 7/236 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 104 DSKNIYLEIRAGTGGDEAGIFVGDLFKAYCRYADLQKWKVEIISSSENNVGGYKEVIALI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  +Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +ID 
Sbjct: 164 KGQGSYSKLKYEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVNINPSDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNK +A  +L+A+LYE EL+ +
Sbjct: 223 FRSGGHGGQSVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
              A   E+ KT++G G    +IR+Y   P   + D R  +   S  +++ G L D
Sbjct: 283 N--AQNKEARKTQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLD 335


>gi|194016506|ref|ZP_03055120.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
 gi|194011979|gb|EDW21547.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
          Length = 355

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 146/242 (60%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E +     G K    +I
Sbjct: 106 DNKNVIVEVRGAAGGEEAALFAGNLYRMYSRYAEMQGWKTEVMEANVTGTGGYKEIIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT
Sbjct: 166 SGKGAYSRLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+ + Q R
Sbjct: 225 FTSSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD-KFQ-R 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A   ++ K+ +G G    +IR+Y   P   V D R  +       +L+G LD+ + A
Sbjct: 283 EAQAEYDQTRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|116333899|ref|YP_795426.1| peptide chain release factor 1 [Lactobacillus brevis ATCC 367]
 gi|122269414|sp|Q03QX7|RF1_LACBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116099246|gb|ABJ64395.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           brevis ATCC 367]
          Length = 361

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 16/349 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L   +    + QD   ++ D
Sbjct: 4   MFDKLQAVADRYDELNELISDPEVIADTQRFMALSKEEGELRETVDKYHQYQDVTQQIAD 63

Query: 69  NLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125
           +  +L   L+ D  S++++    L  Q+  LE + K    LL  +  D  +  +E+H  A
Sbjct: 64  DDEMLHDKLDADMESMIKDELKELTAQKAALEEDIKVL--LLPKDPNDDKNIIMEIHGAA 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L  MY+++AE++ ++ E ++ +  E  G K   ++I G   Y  LK E 
Sbjct: 122 GGDEASLFAADLFSMYSKYAERQGWQIEVVDENATEVGGFKEIVMMITGNKVYSKLKYEN 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ V P  +D ++I+I   D R D YR+SGAGGQH+N 
Sbjct: 182 GAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRTDVYRSSGAGGQHINK 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +LRA++Y+   Q+ E   N     K+ 
Sbjct: 241 TSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILRARVYDYYKQQEESAYNA--ERKSA 298

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   V D R  +       +++G+LDD + A +
Sbjct: 299 VGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDDIIDALI 346


>gi|251771816|gb|EES52391.1| peptide chain release factor 1 [Leptospirillum ferrodiazotrophum]
          Length = 362

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 170/286 (59%), Gaps = 11/286 (3%)

Query: 74  ELALEEDDCSILQETSDNLQRIK--LE-VEYKQFESLLSG-EADSNDAYLEVHAGAGGTE 129
           EL L  DD  + +  S   +R++  LE  E +  +++L   + D  + ++E+ AGAGG E
Sbjct: 70  ELDLIRDDPQMAELVSGEDRRLREVLEGTELRLVDAILPKDQRDERNLFIEIRAGAGGEE 129

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+ E++ F+ E +E ++ +  G K   + ++G NA+  LK E GVHR
Sbjct: 130 AALFAAELGRMYLRFVERQGFRAEVMESNETDIGGSKEFIIYVQGRNAFSRLKYESGVHR 189

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS  ++ + P   + +E++I + D RIDT+ +SGAGGQ VNTT SA
Sbjct: 190 VQRVPVTEAGGRIHTSTVTVAILPEASE-VEVDIEQKDLRIDTFCSSGAGGQSVNTTYSA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+G+VV CQ ERSQ KN+ +A ++LR++L E E+ ++ +   I    KT +G G
Sbjct: 249 VRITHIPSGIVVSCQDERSQLKNRTKAMSVLRSRLLEQEVSRQNQ--EIASQRKTLVGSG 306

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R  +       V++G+L+  + A  A
Sbjct: 307 DRSERIRTYNF-PQNRVTDHRIGLTLYQLDRVMEGELEPLVDALRA 351


>gi|319441088|ref|ZP_07990244.1| peptide chain release factor 1 [Corynebacterium variabile DSM
           44702]
          Length = 361

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS+D  +EV +GAGG E+  +A  L+RMY R+AEK  F  E L+ ++ +  G+K  T+ I
Sbjct: 106 DSDDVVMEVKSGAGGEEAALFAGELVRMYQRYAEKHGFTCEVLDTNETDLGGVKDLTMSI 165

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P    A+   K E GVHR+ RI   +S  R  TS + + VYP  D+  +++I + D
Sbjct: 166 RSKQPTRDGAWSVFKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDDKD 225

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L ++
Sbjct: 226 LRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLAARLQQM 285

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           + ++ +  A  G  ++   +    +IR+Y   P   V D R   +  +   VLDGDL+  
Sbjct: 286 KEEEADAAAAEGRHAQIRTMDRSERIRTYNF-PESRVSDHRIGYKANNLDAVLDGDLEAL 344

Query: 347 MKA 349
             A
Sbjct: 345 FGA 347


>gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
          Length = 355

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 145/249 (58%), Gaps = 7/249 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   D  +  LE+ AG GG E+  +A  L RMYTR+AE  ++K E +  +     G+K
Sbjct: 99  LPSDPMDEKNIILEIRAGTGGDEAGLFAADLYRMYTRYAEANRWKVEEMSSNVTGSGGLK 158

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
                I G   Y  LK E G HR+ R+   +S  R HTS  ++ + P  ++ ++I++   
Sbjct: 159 EVIASIAGDKVYSKLKYESGTHRVQRVPATESQGRIHTSVVTVAIMPEAEE-VDIDLRPE 217

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+D +R+SG GGQ VNTTDSA+R+THIPTG++V CQ E+SQHKNKA+A  +LR++L +
Sbjct: 218 DVRVDVFRSSGPGGQSVNTTDSAIRVTHIPTGMIVICQDEKSQHKNKAKALKVLRSRLLQ 277

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           LE  K +  A    + + ++G G    +IR+Y   P   V D R N+       +L+G+L
Sbjct: 278 LEQDKAK--AEEDAARRIQVGSGDRSERIRTYNF-PQGRVSDHRINLTLHKLPQILEGEL 334

Query: 344 DDFMKATLA 352
           DD   A + 
Sbjct: 335 DDLTDALIG 343


>gi|47558934|gb|AAT35567.1| protein release factor 1 [Chlamydia trachomatis]
          Length = 359

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 21/338 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    NA   +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68

Query: 77  LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130
            + +  ++L+E      + ++R+      KQ E+LL      +D    +E+ AG GG E+
Sbjct: 69  KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+
Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSA
Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S+  ++G G
Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +IR+Y   P   V D R  +   +   V++G+LD
Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIALTLYNLDRVMEGELD 338


>gi|167745421|ref|ZP_02417548.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
 gi|167655142|gb|EDR99271.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
          Length = 357

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/274 (40%), Positives = 161/274 (58%), Gaps = 16/274 (5%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141
           L E+  N++R++ E++      +L    D ND     +E+ AGAGG E+  +A  + RMY
Sbjct: 81  LSESKANVERLEEELK------ILLIPKDPNDDKNIIVEIRAGAGGDEAALFAADVARMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
             +AE R++K E L  ++    G K    +I G  AY   K E GVHR+ RI   +S  R
Sbjct: 135 RSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGVHRVQRIPATESGGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS  ++ + P V+  +E+E+  +DC+ D +RASG GGQ VNTTDSAVR+TH+PTG+VV
Sbjct: 195 IHTSTITVAIMPEVE-DVEVEVDLNDCKFDVFRASGNGGQCVNTTDSAVRLTHLPTGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQ KNK +A  +LR++LYELE QK  +     E  K+++G G    +IR+Y   
Sbjct: 254 SCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAE--AEKRKSQVGTGDRSEKIRTYNY- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           P   V D R  +       V++GDLD+ + +  A
Sbjct: 311 PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTA 344


>gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
 gi|166223612|sp|A6Q6B4|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
          Length = 355

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 141/231 (61%), Gaps = 7/231 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AGAGG ES  +   + RMY+R+AE+  +K E +  +DG   G K     I
Sbjct: 104 DDKNIFLELRAGAGGDESALFVADVFRMYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   ++  R HTS  ++ V P VDD +E++I  ++ ++D 
Sbjct: 164 KGQGVYSQLKYEAGTHRVQRVPDTETQGRVHTSAITVAVIPEVDD-VEVDIKPNEVKMDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVR+THIPTG+VV  Q E+SQHKN+ +A  +L+A++YE ELQK 
Sbjct: 223 YRSSGCGGQSVNTTDSAVRLTHIPTGIVVAIQDEKSQHKNRDKAMKVLKARVYESELQK- 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
            ++       K ++G G    +IR+Y   P   + D R  +   +  DV++
Sbjct: 282 -QLDETAGQRKLQVGSGDRSEKIRTYNY-PQNRLTDHRIGLTLYALDDVMN 330


>gi|313885157|ref|ZP_07818909.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619848|gb|EFR31285.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 359

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 167/298 (56%), Gaps = 16/298 (5%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA- 117
           KE++  + D   +L    EE D  IL    + L  +K E E  Q +  LL    D ND  
Sbjct: 52  KEVEAEIEDTEAMLS---EESDDDILAMAKEELASLKAENEQLQEDIKLLMLPEDPNDGK 108

Query: 118 --YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
              +E+   AGG E+Q +A  LL MYT++A+K+ +KTE L+ +     G K  TL+I G 
Sbjct: 109 NIIMEIRGAAGGDEAQLFAGDLLNMYTKYADKQGWKTEVLDANITGIGGYKEVTLMITGN 168

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             Y  LK E G HR+ R+   +S  R HTS +++ V P  ++ I+ E+ E+D R+D Y A
Sbjct: 169 KVYSKLKFENGAHRVQRVPQTESQGRVHTSTATVVVMPEAEE-IDFELDENDIRVDIYHA 227

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T SAVR+THIPT  VV  Q ERSQ KN+ +A  +LRA++Y+   Q R + 
Sbjct: 228 SGAGGQHVNKTASAVRLTHIPTNTVVAMQDERSQIKNREKAMKILRARVYD---QVRSQA 284

Query: 296 ANIGESS-KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +  +S  K ++G G    +IR+Y   P   V D R  +       VL G+LD+ + A
Sbjct: 285 QSEYDSERKLKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLQQLDSVLSGNLDEIIDA 341


>gi|300741300|ref|ZP_07071321.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|311113380|ref|YP_003984602.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
 gi|300380485|gb|EFJ77047.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|310944874|gb|ADP41168.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
          Length = 360

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 148/247 (59%), Gaps = 10/247 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LEV AGAGG E+  +A  LLRMY R+AE + +KTE +     +  G K A + I
Sbjct: 100 DGRNVILEVKAGAGGDEAALFAGDLLRMYLRYAEHKGWKTEVISSTSTDVGGYKDAQIAI 159

Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG    P    W  +K E GVHR+ R+   +S  R HTS + + V+P VD+  EIEIS++
Sbjct: 160 KGTSNEPAEGVWAHMKYEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEISQN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-- 284
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+  A  +LRA+L  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLA 279

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++ E    E  A+     +T +    +IR+Y   P   + D RT  +  +   VLDGDLD
Sbjct: 280 HQQEQIDAENAAHRASQVRT-MDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLDGDLD 337

Query: 345 DFMKATL 351
             +++ +
Sbjct: 338 PVVQSAI 344


>gi|296331340|ref|ZP_06873812.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676326|ref|YP_003867998.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151455|gb|EFG92332.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414570|gb|ADM39689.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 356

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 184/339 (54%), Gaps = 13/339 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77
           +R   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D   +LE  L
Sbjct: 10  ERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLADAKAMLEEKL 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           + +   +++E    LQ+ + E   ++ + LL      D  +  +E+   AGG E+  +A 
Sbjct: 70  DAEMRDMVKEEISELQK-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G HR+ R+  
Sbjct: 129 NLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENGAHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+
Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +I
Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGSGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R  +       +L+G LD+ ++A +
Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343


>gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [Mycobacterium intracellulare ATCC
           13950]
          Length = 357

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 176/323 (54%), Gaps = 11/323 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP L  N  EA+   R    L   +   +++     D     ELA   DD S  
Sbjct: 18  LERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLEAARELAA--DDDSFA 75

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E SD   R+  E++ +  + L   +  D++D  LEV +G GG ES  +A  L RMY R+
Sbjct: 76  AEASDLESRVA-ELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRY 134

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYDSN 199
           AE+  +    L+    +  G K ATL I  KG +A G W  +K E GVHR+ R+   +S 
Sbjct: 135 AERHGWTVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRVQRVPVTESQ 194

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+
Sbjct: 195 GRVHTSAAGVLVYPEPEEIGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 254

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318
           VV CQ ERSQ +NKA+A  +L A+L  L  ++    A+   +S+   +    +IR+Y   
Sbjct: 255 VVTCQNERSQLQNKARALQVLAARLQSLAEEQALADASADRASQIRTVDRSERIRTYNF- 313

Query: 319 PYQMVKDLRTNIEKTSPSDVLDG 341
           P   + D R N +  +   VLDG
Sbjct: 314 PENRIADHRINFKSHNLDQVLDG 336


>gi|330994789|ref|ZP_08318711.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
 gi|329758050|gb|EGG74572.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
          Length = 353

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/245 (40%), Positives = 143/245 (58%), Gaps = 13/245 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD   A LE+   AGG E+  +A  L   Y R+A+ R ++ E LE    E  G++    
Sbjct: 101 EADERSAILEIRPAAGGDEAGLFAAELFGAYQRYADLRGWRFEVLEYDQSELGGLREGIA 160

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +  LK E GVHR+ R+   +S  R HTS  ++ V P  ++ +++E++E D RI
Sbjct: 161 SITGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVEVNEGDLRI 219

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--- 287
           D YRASGAGGQHVN T+SAVRITH+PT +VV  Q+E+SQHKN+A+A  +LRA+LYE    
Sbjct: 220 DVYRASGAGGQHVNKTESAVRITHLPTNIVVAMQEEKSQHKNRAKAMKILRARLYERNRA 279

Query: 288 ---ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
              E +  +  A +G   ++E     +IR+Y   P   V D R  +       V+ G+LD
Sbjct: 280 AAHETRAADRRAQVGTGDRSE-----RIRTYNF-PQGRVTDHRIGLTLYKIDRVMAGELD 333

Query: 345 DFMKA 349
           +F+ A
Sbjct: 334 EFVDA 338


>gi|319788960|ref|YP_004090275.1| peptide chain release factor 1 [Ruminococcus albus 7]
 gi|315450827|gb|ADU24389.1| peptide chain release factor 1 [Ruminococcus albus 7]
          Length = 359

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 149/241 (61%), Gaps = 8/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +AN L RMY+ +A ++ ++ E +  ++ E  G K  T  +
Sbjct: 107 DDRNVIIEIRGGAGGEEAALFANSLYRMYSMYAAQKNWQIEVMSANETELGGYKEITFTV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-SDCRID 231
            G  AY  LK E GVHR+ R+   +S  R HTS  ++ V P VDD +E+EI+E  + +++
Sbjct: 167 SGQGAYSRLKYESGVHRVQRVPETESQGRVHTSTVTVAVLPEVDD-VELEINEEKEIKME 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +R+SGAGGQH+N T SAVR+ HIPTG VV+CQ ERSQ +N+ +A  ML+AKL + +++ 
Sbjct: 226 VFRSSGAGGQHINKTSSAVRLIHIPTGTVVECQNERSQFQNREKALKMLKAKLLDEKVRA 285

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +E+   I  + ++++G G    +IR+Y   P   + D R  +       +L+G+LD+ + 
Sbjct: 286 QED--EIASNRRSQVGTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVID 342

Query: 349 A 349
           A
Sbjct: 343 A 343


>gi|65317305|ref|ZP_00390264.1| COG0216: Protein chain release factor A [Bacillus anthracis str.
           A2012]
          Length = 323

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I
Sbjct: 74  DDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMI 133

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT
Sbjct: 134 NGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDT 192

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  
Sbjct: 193 FASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ-- 250

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A   ++ K  +G G    +IR+Y   P   V D R  +       +L G LDDF+ A
Sbjct: 251 EAQAEYDQNRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 309


>gi|52082235|ref|YP_081026.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52787627|ref|YP_093456.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|319648109|ref|ZP_08002326.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
 gi|81608865|sp|Q65DV1|RF1_BACLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52005446|gb|AAU25388.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52350129|gb|AAU42763.1| PrfA [Bacillus licheniformis ATCC 14580]
 gi|317389744|gb|EFV70554.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
          Length = 356

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 13/338 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALE 78
           R   LN    DP +  +  + +   +E+  L   +   +  +   ++L D   +LE  L+
Sbjct: 11  RYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLSDAKAMLEEKLD 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136
            D   +++E    LQ  ++E    Q + LL      D  +  +E+   AGG E+  +A  
Sbjct: 71  SDMREMVKEEISELQE-EIESLTDQLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAGN 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G HR+ R+   
Sbjct: 130 LYRMYSRYAELQGWKTEVMEANMTGTGGYKEIIFMINGNGAYSRLKYENGAHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+P
Sbjct: 190 ESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K+ +G G    +IR
Sbjct: 249 TGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQNRKSAVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R  +       +L+G LD+ + A +
Sbjct: 307 TYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALI 343


>gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 357

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 176/318 (55%), Gaps = 16/318 (5%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIK-LEVEY-KQ 103
           +E   +   I  IK   D + D   L ++  ++D D  I +    +L+ IK  E EY K+
Sbjct: 36  KEYSSIGEIIETIKSYIDAIKDKEDLKKILSDKDSDIEIREMAEHDLEEIKSKEQEYEKK 95

Query: 104 FESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +  L    EAD  +A +E+ AG GG E+  +A+ L  MY + +    ++ E L +   E
Sbjct: 96  VKVFLLPKDEADEKNAIVEIRAGTGGLEASLFASDLFNMYQKVSSINGWRVEVLSVSASE 155

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     I G N +  LK E GVHR+ R+   ++  R HTS +++ V    ++ +++
Sbjct: 156 AGGYKEIVFTITGKNVFSKLKFESGVHRVQRVPDTETQGRVHTSAATVAVLAEAEE-VDV 214

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I E+D RID +R+ G GGQ VNTTDSAVRITHIPTGVVV  Q E+SQHKNKA+A  +LR
Sbjct: 215 KIDENDLRIDVFRSGGPGGQSVNTTDSAVRITHIPTGVVVAIQDEKSQHKNKAKAMTILR 274

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           ++LYE E  + E   ++  + K++IG G    +IR+Y   P   V D R N+     +  
Sbjct: 275 SRLYEAERLRLENERSV--ARKSQIGTGDRSERIRTYNF-PQGRVSDHRINLTLHKLTGF 331

Query: 339 LDGDLDDF--MKATLAIK 354
           L G  DDF  M   L IK
Sbjct: 332 LAG--DDFAEMSDALQIK 347


>gi|259418822|ref|ZP_05742739.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
 gi|259345044|gb|EEW56898.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
          Length = 444

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/315 (36%), Positives = 172/315 (54%), Gaps = 15/315 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-Q 103
           L +E   L      I+  +  L D     E+  + D  ++ +E    L+    E E+  Q
Sbjct: 126 LAKEYSDLRPVAEQIRAYRQLLSDLAEAEEMLADPDMKALAEEEIPTLKAALPEAEHALQ 185

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              L   EADS  A LE+  G GG E+  +A  L RMY+R+AE + +K + +E    E  
Sbjct: 186 LALLPKDEADSRAAILEIRPGTGGDEAALFAGDLYRMYSRYAEAQGWKIDVIEEQVSELG 245

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G+K     I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++I+I
Sbjct: 246 GLKELVARINGDGVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDIKI 304

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
             +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+ +
Sbjct: 305 DANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTR 363

Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           LY+LE Q+       +  + +G   ++E     +IR+Y   P   + D R N+       
Sbjct: 364 LYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLEQ 417

Query: 338 VLDGDLDDFMKATLA 352
           ++ GDLD+ + A ++
Sbjct: 418 IMGGDLDEIIDALIS 432


>gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
 gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
          Length = 367

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/261 (40%), Positives = 161/261 (61%), Gaps = 11/261 (4%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           KLE E ++   L   + D+ +  LEV AG GG E+  +A  L  MY ++AE+ K++ E +
Sbjct: 93  KLEFEIRRM-LLPKDKDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEII 151

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
            I   E  G K A   I G   +  LK E GVHR+ R+   +S  R HTS +++ V P  
Sbjct: 152 SISHNEIGGYKEANASISGSEVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEP 211

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +D ++++I++ D RID YR+SG GGQ VNTTDSAVR+THIPTG+VV  Q E+SQHKN+A+
Sbjct: 212 ED-VDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRVTHIPTGIVVIQQDEKSQHKNRAK 270

Query: 276 AWNMLRAKLYELELQK-REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           A  +L+ +LYE+E  K ++EI+++    K++IG G    + R+Y   P   + D R N+ 
Sbjct: 271 AMKVLKVRLYEIERNKVQQEISSM---RKSQIGSGERSEKTRTYNF-PQGRITDHRINLT 326

Query: 332 KTSPSD-VLDGDLDDFMKATL 351
               ++ V +G+L+  ++A +
Sbjct: 327 TYRINETVKEGELEPIIEALI 347


>gi|332701398|ref|ZP_08421486.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332551547|gb|EGJ48591.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 357

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 11/242 (4%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D  LE+ AG GG E+  +A  L RMY R+AE+  +K E L  H+    G K     I G
Sbjct: 107 KDVILEIRAGTGGEEASLFAADLFRMYMRYAERVGWKVEMLSEHESATGGFKEVIASISG 166

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
              Y  LK E G+HR+ R+   ++  R HTS  ++ V P  ++ ++++I  ++ RID YR
Sbjct: 167 ERVYSRLKYESGIHRVQRVPATETQGRIHTSAVTVAVLPEAEE-VDLDIDPTELRIDVYR 225

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKR 292
           ASGAGGQHVN T+SAVRITH+PT  VV CQ E+SQHKNKA+A  +LR+++ +     +K 
Sbjct: 226 ASGAGGQHVNKTESAVRITHLPTNTVVTCQDEKSQHKNKAKAMKVLRSRILQSMQAARKD 285

Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A    + +  +G G    +IR+Y   P   + D R N+   S S V++G LDD ++A
Sbjct: 286 EEDA----ARRLLVGSGDRSGRIRTYNF-PQGRITDHRINLTLYSLSAVMEGALDDLVEA 340

Query: 350 TL 351
            +
Sbjct: 341 LI 342


>gi|297828437|ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 410

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 8/245 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K + ++I + +  G K A+ 
Sbjct: 155 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYKEASA 214

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G + YG LK E G+HR+ RI   + + R HTS  S+ + P  D+ +++++   D RI
Sbjct: 215 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 273

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH N+A+A  +L A+LYE+E  
Sbjct: 274 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERL 333

Query: 291 KREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346
           + +  ++  +    +IG G    +IR+Y   P   V D R  I   +  D++ G+ LD F
Sbjct: 334 RIQ--SSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITLHAIEDMMQGEILDSF 390

Query: 347 MKATL 351
           + A L
Sbjct: 391 IDALL 395


>gi|86140561|ref|ZP_01059120.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
 gi|85832503|gb|EAQ50952.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
          Length = 360

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 145/232 (62%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+ AG GG E+  +A  L RMY ++ E + ++T  ++  +G   G K   + +
Sbjct: 108 DAKNAVMEIRAGTGGDEASIFAGDLYRMYMKYCESKGWRTSTIDYSEGTSGGYKEIQVEV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG L+ E GVHR+ R+   ++  R HTS +++ V+P  ++  ++EI   D RID 
Sbjct: 168 TGEDVYGTLRFEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVEIDPKDVRIDY 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QK 291
           + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +K
Sbjct: 227 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKK 286

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +EE A    S  T      +IR+Y   P   V D R N+     ++++DGD+
Sbjct: 287 QEEDAAKRGSMVTSGDRSAKIRTYNY-PQGRVTDHRINLTLYDLANIIDGDI 337


>gi|317130773|ref|YP_004097055.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
 gi|315475721|gb|ADU32324.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
          Length = 357

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 191/348 (54%), Gaps = 13/348 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   AV+ R   LN    DP +  +  + +   +E+  ++  +      KEI+ +  D
Sbjct: 1   MFDRLEAVEERYERLNELLMDPDVISDTKKLRDYSKEQSDIEETVQTFREYKEIKKQYTD 60

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
              +L E  L+++   +++   D L+     +E K    LL  +  D  +  +E+   AG
Sbjct: 61  AKTMLKEEDLDDEMYEMVKMEMDELEDQIPPLEEKLRVLLLPKDPNDDKNVIVEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + ++ E +E  + +  G K    +I G  AY  +K E G
Sbjct: 121 GDEAALFAGDLYRMYSRYAEAQGWRPEVIEASENDIGGYKEIIFMINGKGAYSKMKYENG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  ++ +E++I+E D R+DT+ +SG GGQ VNTT
Sbjct: 181 AHRVQRVPTTESGGRIHTSTATVAVLPEAEE-VEVDINEKDIRVDTFASSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTGVVV CQ E+SQ KNK +A  +LRA++Y+ + +K  E A   ++ K+ +
Sbjct: 240 MSAVRLTHIPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD-KFRKEAE-AEYAQNRKSAV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G G    +IR+Y   P   V D R  +       +L+G LD+   A +
Sbjct: 298 GTGDRSERIRTYNF-PQSRVTDHRIGLTLQKLDQILEGKLDEITDALI 344


>gi|146300064|ref|YP_001194655.1| peptide chain release factor 1 [Flavobacterium johnsoniae UW101]
 gi|189039972|sp|A5FHI8|RF1_FLAJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146154482|gb|ABQ05336.1| bacterial peptide chain release factor 1 (bRF-1) [Flavobacterium
           johnsoniae UW101]
          Length = 358

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 154/260 (59%), Gaps = 6/260 (2%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L E  D L  ++ E+   +F  +     D+ +  +E+ AG GG E+  +A  L RMYT++
Sbjct: 81  LDEAKDRLPELEEEI---KFMLIPKDPEDAKNVMVEIRAGTGGDEASIFAGDLFRMYTKY 137

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            E   ++T  +++++G   G K     + G + YG LK E GVHR+ R+   ++  R HT
Sbjct: 138 CETMGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 197

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P  ++  ++++  +D R+D + +SG GGQ VNTT SAVR+THIPTG+V QCQ
Sbjct: 198 SAATVMVLPEAEE-FDVQVDMNDVRVDFFCSSGPGGQSVNTTKSAVRLTHIPTGLVAQCQ 256

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323
            E+SQHKNK +A  +LR++LYE+EL K++E      SS+   G    +IR+Y     + V
Sbjct: 257 DEKSQHKNKDKALMVLRSRLYEMELAKKQEEDAKKRSSQVSSGDRSAKIRTYNYAQGR-V 315

Query: 324 KDLRTNIEKTSPSDVLDGDL 343
            D R  +      ++++GD+
Sbjct: 316 TDHRVGLTLYDLGNIMNGDI 335


>gi|319951972|ref|YP_004163239.1| bacterial peptide chain release factor 1 (brf-1) [Cellulophaga
           algicola DSM 14237]
 gi|319420632|gb|ADV47741.1| bacterial peptide chain release factor 1 (bRF-1) [Cellulophaga
           algicola DSM 14237]
          Length = 372

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 142/232 (61%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +EV AG GG E+  +A  L RMYT++ E + +KT  +++ +G   G K     +
Sbjct: 120 DSKNVVVEVRAGTGGDEASIFAGDLFRMYTKYCESKGWKTNVIDLSEGTSGGYKEIQFEV 179

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +++ V P  +D  +++I   D RID 
Sbjct: 180 TGDNVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIEPKDVRIDF 238

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+THIP+G+V QCQ ++SQHKNK +A+ +LR++LY+ EL K+
Sbjct: 239 FCSSGPGGQSVNTTYSAVRLTHIPSGLVAQCQDQKSQHKNKEKAFKVLRSRLYDQELAKK 298

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +E      +S+   G    +IR+Y     + V D R  +      ++++GD+
Sbjct: 299 QEEDAAKRNSQVSSGDRSAKIRTYNYSQGR-VTDHRIGLTLYDLQNIMNGDI 349


>gi|168830308|gb|ACA34405.1| PrfA [uncultured bacterium pTW2]
          Length = 360

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLEV AG GG E+  +A  L RMY R+AE++ +K E      GE  G K     +
Sbjct: 107 DDGNLYLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKLEVESASVGEHGGYKEIVARV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E G HR+ R+   +S  R HTS +++ +       + IEI+ +D RIDT
Sbjct: 167 EGRGAYSKLKFESGTHRVQRVPDTESQGRIHTSAATVAIIAEDSSDVAIEINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN TDSA+RITH+P+GVVV+ Q ERSQH N+ +A   LRA L E E  +R
Sbjct: 227 FRSSGAGGQHVNKTDSAIRITHLPSGVVVENQTERSQHANRDKAMKRLRAMLVEAETSRR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
           E  A   +  K ++G G   ++IR+Y   P   + D R   +      +VL+G+LD  ++
Sbjct: 287 E--AAQAQDRKLQVGSGDRSQRIRTYNY-PQGRITDHRVEGLTLYDLPNVLEGNLDALIE 343


>gi|166710803|ref|ZP_02242010.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 361

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 175/322 (54%), Gaps = 10/322 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  N  + + L RE   L+  ++   E + R   +L   E    + +   L E    
Sbjct: 25  DPDVVNNNDKFRTLSRELSQLE-PVAVALEDEARAKADLSAAEAMRTDPEMRELAEEEIA 83

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + +LE    Q  SLL      +D   +LEV AG GG E+  +A  L RMY R+AE++ 
Sbjct: 84  AAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQG 143

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E      GE  G K     + G  AY  LK E G HR+ R+   +S  R HTS +++
Sbjct: 144 WKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATV 203

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            +    DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQ
Sbjct: 204 AIIAEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQ 263

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
           H N+ +A   L+A+L  L+ ++ +  A   ++ K ++G G   ++IR+Y   P   + D 
Sbjct: 264 HANRDKAMKRLKAQL--LDTERSKAAAAQAQTRKLQVGSGDRSQRIRTYSF-PQGRITDH 320

Query: 327 RT-NIEKTSPSDVLDGDLDDFM 347
           R   +      ++++GDLD  +
Sbjct: 321 RVEGLTLYDLPNIIEGDLDALI 342


>gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 365

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 145/240 (60%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ DA +EV AG GG ES  +A  LLRMY R+AE+  ++T+ L     E  G K   L +
Sbjct: 107 DARDAIVEVKAGEGGEESALFAGDLLRMYERYAERMGWQTQILSSVPTELGGFKDVQLAV 166

Query: 173 KGPNA--------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +  +A        +  LK E GVHR+ R+   +S  R HTS + + V+  VDD  E+EI+
Sbjct: 167 RLRSAPEDPADGVWAHLKFEAGVHRVQRVPVTESQGRLHTSAAGVLVFAEVDDPGEVEIA 226

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ++D R+D +R+SG GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ KN+  A  +LRA+L
Sbjct: 227 DADIRVDVFRSSGPGGQSVNTTDSAVRITHIPTGLVVSCQDEKSQIKNREAAMRVLRARL 286

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            +++L Q+ EE A +  S    +    +IR+Y   P   + D RT  +  +   VL G+L
Sbjct: 287 RQMQLEQQAEENAAMRRSQVRTVDRSERIRTYNF-PENRISDHRTGYKAYNLDQVLAGNL 345


>gi|157694096|ref|YP_001488558.1| peptide chain release factor 1 [Bacillus pumilus SAFR-032]
 gi|166977360|sp|A8FID1|RF1_BACP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157682854|gb|ABV63998.1| peptide chain release factor RF1 [Bacillus pumilus SAFR-032]
          Length = 355

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 145/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E       G K    +I
Sbjct: 106 DNKNVIVEVRGAAGGEEAALFAGNLYRMYSRYAEMQGWKTEVMEASVTGTGGYKEIIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT
Sbjct: 166 SGKGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+ + Q R
Sbjct: 225 FTSSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD-KFQ-R 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A   ++ K+ +G G    +IR+Y   P   V D R  +       +L+G LD+ + A
Sbjct: 283 EAQAEYDQTRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|313801610|gb|EFS42850.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA2]
          Length = 361

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +RL  + T+  D  +  +      L R    L + +S    + D+L  ++   E  
Sbjct: 10  DEVRRRLREIETQLADSAVLSDPSAMGRLGRRHARLRHVVSVADRV-DQLRADVEAAEDL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    L+  ++ L R +L++   +   LL  S   D  DA +E+H+G GG ES  +A
Sbjct: 69  TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191
             LLRMYTR+AE+  +    L     +  G ++  + + G P+  AYG+LK E GVHR+ 
Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302
           +TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+          E +  +R+++  +  S+
Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        +R+Y   P   + D R   +      +L GDL D + A
Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|315497942|ref|YP_004086746.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
 gi|315415954|gb|ADU12595.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
          Length = 358

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 182/343 (53%), Gaps = 14/343 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +  + E       +++   L +E   L   +  +  +         L EL
Sbjct: 9   LDQVVDRFRMIEARMESATDGTEIVK---LSKEHAELKPVVDAVTALLKARASGPELEEL 65

Query: 76  -ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQD 132
            AL + + S L QE    L+    E+E      L   + D N  A LEV AG GG E+  
Sbjct: 66  IALNDPELSPLAQEEFQELKERLPELERGVALLLAPKDKDENASAILEVRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+A  + ++ E   I +G+  G K     + G   +G LK E GVHR+ R
Sbjct: 126 FAGDLFRMYSRYAASQGWRVEIDSISEGDAGGYKEIIASVTGDGVFGKLKFESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P  +D +EI+I + D RIDTYRASG+GGQHVN TDSAVRI
Sbjct: 186 VPATEAGGRIHTSAATVAVLPEAED-VEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+V     E+SQH N+  A   L+A+LY+++ Q  +  A   ++ K+++G G   
Sbjct: 245 THLPTGIVA-TSSEKSQHMNRQIAMRNLKARLYDIQRQALD--AARSDARKSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+   + S  ++G++D  + A +A
Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLYNLSQFMEGEMDQMINALIA 343


>gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus sp. MC-1]
 gi|226739111|sp|A0LDT7|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus sp.
           MC-1]
          Length = 361

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 161/285 (56%), Gaps = 11/285 (3%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTES 130
           LA   DD  + Q   +  + +K ++E  Q    L+    D ND     LE+ AG GG E+
Sbjct: 67  LAEAGDDAEMRQMAREERETLKNKLEQSQKHLHLMLLPKDPNDDKNVILEIRAGTGGEEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + L RMY R+AE + ++ E L     +  G K    +++G  AY  LK E GVHR+
Sbjct: 127 ALFVSDLFRMYGRFAEIKGWRIEMLSSSATDLGGYKELIAMVQGKGAYMGLKYESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS  ++ + P  D+ +E+ I + D RID YR+SG GGQ VNTTDSAV
Sbjct: 187 QRIPVTETGGRIHTSAVTVAILPEADE-VELHIEDKDLRIDVYRSSGPGGQSVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV CQ E+SQHKNKA+A  +L+A+L  L+ Q++   +   E+ K ++G G 
Sbjct: 246 RITHLPTGLVVICQDEKSQHKNKAKAMKVLQARL--LDAQQQAADSQRAEARKGQVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+       VL G L + + A  A
Sbjct: 304 RSERIRTYNF-PQSRVTDHRINLTLHKLDQVLQGGLAEVVDALTA 347


>gi|224130870|ref|XP_002320945.1| predicted protein [Populus trichocarpa]
 gi|222861718|gb|EEE99260.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 147/248 (59%), Gaps = 14/248 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +AD  D  LEV AG+GG E+  +A  + +MY R+++   +K E + I + +  G K A+ 
Sbjct: 103 DADERDCILEVRAGSGGEEASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASA 162

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G + +G LK E G+HR+ R+   +   R HTS  S+ + P  D+ +++++   D RI
Sbjct: 163 AISGADVFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADE-VDLQLRNEDLRI 221

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYR+ G+GGQH NTT+SAVRITH+PTG+ V  Q ERSQH NK++A  +L AKLYE+E  
Sbjct: 222 DTYRSGGSGGQHANTTNSAVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERS 281

Query: 291 K------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-L 343
           +      R     IG   ++E     +IR+Y   P   V D R  I   S +DV+ G+ L
Sbjct: 282 RLHMSRSRLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGITHHSINDVMQGESL 335

Query: 344 DDFMKATL 351
           D F+ A L
Sbjct: 336 DVFIDALL 343


>gi|300933612|ref|ZP_07148868.1| peptide chain release factor 1 [Corynebacterium resistens DSM
           45100]
          Length = 353

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 21/345 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +     L  +  DP L  +   A+ + +    L   I   ++++    D+    E+A
Sbjct: 3   DDILAEYQGLEAQLGDPELHNDPAAARKVGKRFSELQPIIQTHQQLEQAREDHEAAAEMA 62

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTES 130
            E  D    +E        +LE E  + E  L+         D +D  +E+ +GAGG E+
Sbjct: 63  SE--DAEFAEEAK------RLETEIAELEEKLTDLLAPRDPHDGDDIVMEIKSGAGGEEA 114

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQ 185
             +A  L RMY R+AE+  F TE L++++ +  G+K  T+ I  K P+   A+   K E 
Sbjct: 115 ALFAGELARMYQRYAERHGFATEVLDLNETDLGGVKDMTMSIRSKQPSRDGAWAEFKFEG 174

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ RI   +S  R  TS + + VYP  D+  +++I E D RID YR+SG GGQ VNT
Sbjct: 175 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDEKDLRIDVYRSSGKGGQGVNT 234

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGVVV CQ+ERSQ +NKA+A  +L A+L ++E +K E  A  G +++  
Sbjct: 235 TDSAVRITHLPTGVVVTCQKERSQIQNKARAMQVLAARLQQMEEEKAEAEAAEGRAAQIR 294

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +    +IR+Y   P   V D R   +  +   VL GDL+    A
Sbjct: 295 TMDRSERIRTYNF-PESRVSDHRIGYKANNLDAVLGGDLESLFAA 338


>gi|291520820|emb|CBK79113.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus catus
           GD/7]
          Length = 357

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 194/354 (54%), Gaps = 24/354 (6%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68
           +FD  D+ + R   +  +  DP +  +    + LM+E+   Q L    +  K  +  + D
Sbjct: 1   MFDRLDDILIRYQQIMEELNDPDVVNDQKHFRKLMKEQSDLQPLVEKYTEYKNTKQTIED 60

Query: 69  NLILLELALEEDDCSIL-------QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +L +LE+   EDD  +         E   N+ +I+ E+   +   +     D  +  +E+
Sbjct: 61  SLEMLEV---EDDEEMKEMLKEELSEAKSNIAKIEQEL---KVLLIPKDPMDEKNVIVEI 114

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  +A  L RMY+++AE +++K E +++ +    G K    ++ G + Y  +
Sbjct: 115 RAGAGGDEAALFAAELFRMYSKYAESKRWKIEMMDVSENGIGGFKECVFMVSGDHVYSRM 174

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS  ++ + P  ++ +++EI  +D RID  RASG GGQ
Sbjct: 175 KFESGVHRVQRVPETESGGRIHTSTVTVAIMPEAEE-VDVEIDMNDVRIDVMRASGNGGQ 233

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KL E+E++K+   A     
Sbjct: 234 CVNTTDSAVRLTHNPTGIVIYSQTEKSQLQNKEKAFRLLRSKLLEIEIEKKH--AEEAAL 291

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K ++G G    +IR+Y   P     + R  +      D+++GDLD+ + + +A
Sbjct: 292 RKNQVGTGDRSEKIRTYNF-PQGRCTEHRIKLTLYRLGDIMNGDLDEIIDSLIA 344


>gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
 gi|258555537|gb|ACV78479.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
          Length = 361

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 178/337 (52%), Gaps = 11/337 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  DP +  +   ++ L R    L   ++  +++     D     EL  E  D    
Sbjct: 19  LQVKLSDPAVHADQAVSRKLGRRYAELTPIVTTARDLAATRGDLQAAQELGAE--DAGFA 76

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           +E      R+  E+E +  E L   + D   D  +EV AG GG ES  +A  LLRMY R+
Sbjct: 77  EEARTLAGRVD-ELEQRLSELLAPRDPDDGKDVLVEVKAGEGGEESALFAGDLLRMYLRY 135

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLVRISPYDSN 199
           AE+R +KTE L   + +  G K  T+ +K P A     +  LK E GVHR+ R+   +S 
Sbjct: 136 AERRGWKTEVLSATESDLGGYKDVTVAVKSPAATPDGVWARLKFEGGVHRVQRVPVTESQ 195

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS + ++V P V+D  ++EI+++D RID +R+SG GGQ VNTTDSAVRITH+PTG+
Sbjct: 196 GRVHTSAAGVFVAPEVEDVNDVEIADADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGI 255

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318
           VV CQ E+SQ +NK QA  +LRA++        +  A     S+   +    ++R+Y   
Sbjct: 256 VVSCQNEKSQLQNKEQAMRILRARMLAAARATADAAAADARRSQVRTVDRSERVRTYNY- 314

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   + D R   +  +   VLDGDLD  + A  A  +
Sbjct: 315 PENRIADHRVGYKAYNLDAVLDGDLDAVLDALSAADR 351


>gi|315453082|ref|YP_004073352.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
 gi|315132134|emb|CBY82762.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
          Length = 349

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 104 DNKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEMIALI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ +D RI+ 
Sbjct: 164 KGQGVYSRLKFEAGTHRVQRVPETESQGRIHTSAVTVAIMPEVDD-VEVNINPNDLRIEV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKN+ +A  +L+A+LYE +++++
Sbjct: 223 FRAGGHGGQCVNTTDSAVRITHIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           ++ AN  ES K ++G G    +IR+Y   P   + D R N+   S  ++ L G+LD  ++
Sbjct: 283 QQ-AN-SESRKMQVGSGDRSERIRTYNY-PQNRLSDHRINLTLYSLEEIMLSGNLDPVIE 339

Query: 349 ATLA 352
             +A
Sbjct: 340 PLIA 343


>gi|15828576|ref|NP_325936.1| peptide chain release factor 1 [Mycoplasma pulmonis UAB CTIP]
 gi|20139344|sp|Q98RA5|RF1_MYCPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14089518|emb|CAC13278.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis]
          Length = 359

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 137/242 (56%), Gaps = 6/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  L  MY++WA     K   L+ +     G       I
Sbjct: 110 DELDVIMEIRGAAGGDEANIFAGDLFEMYSKWANNNNMKVSVLDRNYATSGGFTLIVFTI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   +S  R HTS +++   P +DD IE+EI+ SD +IDT
Sbjct: 170 SGEKAYSKLKFESGVHRVQRIPVTESKGRVHTSTATVTAMPEIDDDIEVEINPSDLKIDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQ VNTTDSAVRITHIPTG++   Q+ RSQ  N+  A  +L+AKLY+ E QK+
Sbjct: 230 FRSSGAGGQSVNTTDSAVRITHIPTGIISSSQEGRSQISNRELALKILKAKLYDHENQKK 289

Query: 293 EEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            E   +G+  K      R  +IR+Y   P   V D R N   +S   +++G L   + + 
Sbjct: 290 LE--KVGQYRKLAGSGARSEKIRTYNY-PQDRVTDHRINF-SSSLKQIMEGKLQIIIDSL 345

Query: 351 LA 352
           LA
Sbjct: 346 LA 347


>gi|301629497|ref|XP_002943876.1| PREDICTED: peptide chain release factor 1-like [Xenopus (Silurana)
           tropicalis]
          Length = 460

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 143/240 (59%), Gaps = 6/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A+LE+ AG GG ES  +A  L R+YTR+A    ++ E +  ++ E  G K   L I
Sbjct: 207 DARNAFLEIRAGTGGDESALFAGDLARVYTRYAATVGWRVEIMSANESELGGYKEVVLRI 266

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG L+ E G HR+ R+   ++  R HTS  ++ V P  D+   I ++ +D RIDT
Sbjct: 267 EGDHVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEQQAIMLNPADLRIDT 326

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVR+ HIPTG+V +CQ  RSQH NKA+A  +L+A++ + E  + 
Sbjct: 327 FRASGAGGQHINKTDSAVRVVHIPTGIVAECQDGRSQHSNKAKALQVLQARIQDKE--RS 384

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      +  IG G    +IR+Y   P     D R N+       +++GDL + ++A
Sbjct: 385 ERAAKEAAVRRGLIGSGDRSDRIRTYNF-PQGRFTDHRINLTLYKLLAIMEGDLGEVLQA 443


>gi|296121187|ref|YP_003628965.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
 gi|296013527|gb|ADG66766.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
          Length = 363

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 188/345 (54%), Gaps = 19/345 (5%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQH--LDNAISFIKE---IQDRLCDNLILLELA 76
           R   L  + +DP +  +V  +KML  +R+H  L    S ++E   +QD L     +L  A
Sbjct: 15  RFEELEAQLQDPEVLADV--SKMLEIQREHGGLSKIASTVREFNTLQDDLLAAETMLAEA 72

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS---NDAYLEVHAGAGGTESQDW 133
            +++   I Q   D L + + E    + E +++   DS       +E+ AG GG E+  +
Sbjct: 73  TDDETKEIAQAEIDEL-KPRFEPLKTELEDMVTA-GDSLTRGSLIMEIRAGTGGDEAALF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L  MYTR+ + + +K E +E+   E  G+K   + I G  AY  L+ E G HR+ R+
Sbjct: 131 ARDLYEMYTRYVDLQGWKYEVMELTTSELGGLKEVVITITGSGAYHRLQFESGGHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V     + I++EI + D RIDT RA G GGQ VN T+SAVRIT
Sbjct: 191 PETETQGRVHTSAATVAVMAEASE-IDVEIRDEDLRIDTMRAGGPGGQKVNKTESAVRIT 249

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIP+G+VV+ Q E+SQHKNKA+A  +LR++L  +EL++ +  A   E  +T +G G    
Sbjct: 250 HIPSGLVVRIQDEKSQHKNKAKALRVLRSRL--MELRESQAHAVRAEQRRTLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +       ++ G+LD+ +   LA  +
Sbjct: 308 RIRTYNF-PQNRLTDHRIGLTVYKLDQIMQGNLDELINPILAFDR 351


>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
 gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 359

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/312 (37%), Positives = 174/312 (55%), Gaps = 24/312 (7%)

Query: 47  RERQHLDNAISFIKEIQ----DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           RE +   +AI+  +E+Q    D   D+L+  ELA        L+ET     +  LE E K
Sbjct: 51  REYRKTVDAIAENEELQREKLDPEMDSLVKAELAE-------LRET-----KATLEEEIK 98

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
               L +   D  +  +E+H  AGG E+  +A  L  MYTR+AE + +K E ++ +  + 
Sbjct: 99  IL-MLPTDPNDDKNIIMEIHGAAGGDEASLFAADLYNMYTRYAETQGWKVEVVDENATDV 157

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K   L+I G   Y  LK E G HR+ R+   +S  R HTS S++ V P  +D ++IE
Sbjct: 158 GGFKEIVLMISGNKVYSKLKYENGAHRVQRVPVTESAGRVHTSTSTVGVMPEAED-VDIE 216

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I + D R D YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q ERSQ +N+ +A  +L+A
Sbjct: 217 IDQKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKA 276

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++Y+   Q +EE A   E  K+ +G G    +IR+Y   P   V D R  +       V+
Sbjct: 277 RVYDY-YQTQEEDAYNAE-RKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVM 333

Query: 340 DGDLDDFMKATL 351
           +G+LDD + A +
Sbjct: 334 NGELDDIIDALI 345


>gi|301094068|ref|XP_002997878.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
 gi|262109801|gb|EEY67853.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
          Length = 366

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/246 (41%), Positives = 148/246 (60%), Gaps = 9/246 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD   + LE+ AG+GG E+  +A  +L+MY + A  + +K E + I + +  G+K    
Sbjct: 114 EADDKSSILEIRAGSGGDEACLFAGDILKMYQKVALAKGWKFELMSISETDLGGVKECVC 173

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G  AYG +K E GVHR+ R+   D   R HTS  S+ V P  ++ +E+EI   D RI
Sbjct: 174 SLTGRGAYGRMKFESGVHRVQRVPVNDV--RVHTSAVSVVVLPEAEE-VEVEIDPKDLRI 230

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D YRASGAGGQHVNTT+SAVRITHIPTG+V   Q ERSQH+NKA+A  +LRA++++   +
Sbjct: 231 DVYRASGAGGQHVNTTESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIRR 290

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           KR+  A       +++G G    ++R+Y   P   V D R N+       +L+G+L D +
Sbjct: 291 KRD--AERQTMRNSQVGSGDRSERVRTYNF-PQSRVSDHRVNVTVFGIERMLNGELLDEI 347

Query: 348 KATLAI 353
              L +
Sbjct: 348 VDALVV 353


>gi|323342350|ref|ZP_08082582.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463462|gb|EFY08656.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 359

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 143/243 (58%), Gaps = 7/243 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +DS DA +E+   AGG E   +A  L RMYTR+AE   +K E +E  D E  G    + +
Sbjct: 109 SDSFDAIVEIRGAAGGDEGNIFAGDLYRMYTRYAESLGYKYELIEAMDAEAGGYSLISFV 168

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG   +   K E G HR+ R+   ++  R HTS +++ V   V+D  EI+I  +D  ID
Sbjct: 169 VKGAEPFRHFKFESGAHRVQRVPKTETQGRIHTSTATVLVLADVEDE-EIDIDPNDLEID 227

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+SGAGGQHVN TDSAVRI H PTG+ V+CQ  RSQH NK +A  ++RA++YE E Q+
Sbjct: 228 TMRSSGAGGQHVNKTDSAVRIVHKPTGIAVKCQDGRSQHDNKDKAMRLVRARVYE-EHQR 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R +    GE  ++++G G    +IR+Y   P   V D R  +       +++G LD+ + 
Sbjct: 287 RIQEERHGE-RQSKVGTGARSEKIRTYNY-PQNRVSDHRIGLTLQKLDIIMEGKLDEIVN 344

Query: 349 ATL 351
           A L
Sbjct: 345 ALL 347


>gi|40062641|gb|AAR37562.1| peptide chain release factor 1 [uncultured marine bacterium 313]
          Length = 358

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/235 (42%), Positives = 146/235 (62%), Gaps = 7/235 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EADS +A +E+ AG GG E+  +   L +MY +    +K+  E + +   E  G K   L
Sbjct: 105 EADSKNAIVEIRAGTGGLEATLFVADLYKMYEKVCLNKKWSFEIINLSKSEAGGFKEVIL 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           LIKG N Y +LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++++I + D RI
Sbjct: 165 LIKGANIYSFLKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEE-VDVKIEDKDLRI 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +R++GAGGQ VNTTDSAVRITHIPTG+VV  Q E+SQHKN+A+   +LR+++YE E +
Sbjct: 224 DVFRSTGAGGQSVNTTDSAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRIYESERE 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           K+E+  +     K +IG G    +IR+Y   P   V D R N+      + L+GD
Sbjct: 284 KKEKERS--RDRKNQIGTGDRSERIRTYNF-PQGRVTDHRINLTIHKLQEFLNGD 335


>gi|297821206|ref|XP_002878486.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324324|gb|EFH54745.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 193/339 (56%), Gaps = 15/339 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82
           L+ K  DP +  N  E + L +    LD  ++  +  +D   +L ++ +L + A +++D 
Sbjct: 71  LSVKLADPAVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDM 130

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           + +  +  N   I++E   KQ + LL  S   D+ +  LEV AG GG E+  W   L+RM
Sbjct: 131 AEMIGSEINSLSIEIEGLEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRM 190

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R++E+  +K   +   + E  G K+  + IKG   Y  LK E GVHR+ R+   ++  
Sbjct: 191 YQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQG 250

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ + P  D+ +E+ I   D  + + R+ GAGGQ+VN  ++A+ + H P+G+ 
Sbjct: 251 RVHTSTATVAIMPEADE-VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIR 309

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           + C +ER+Q +NKA+A+ +LRAKLYE+++++++E   I    K+++G G    +IR+Y  
Sbjct: 310 IFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERKSQVGTGARSEKIRTYNY 367

Query: 318 QPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +  ++    L+ N   TS    LDG L+D ++A  A+++
Sbjct: 368 KDSRVTDHRLKMNFALTS---FLDGALEDAVQACAALEQ 403


>gi|42569997|ref|NP_182225.3| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana]
 gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 8/245 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K + ++I + +  G K A+ 
Sbjct: 158 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 217

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G + YG LK E G+HR+ RI   + + R HTS  S+ + P  D+ +++++   D RI
Sbjct: 218 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 276

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH N+A+A  +L A+LYE+E  
Sbjct: 277 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERL 336

Query: 291 KREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDF 346
           + +  ++  +    +IG G    +IR+Y   P   V D R  I   +  D++ G +LD F
Sbjct: 337 RIQ--SSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMF 393

Query: 347 MKATL 351
           + A L
Sbjct: 394 IDALL 398


>gi|226942019|ref|YP_002797093.1| PrfA [Laribacter hongkongensis HLHK9]
 gi|254790885|sp|C1D5R7|RF1_LARHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226716946|gb|ACO76084.1| PrfA [Laribacter hongkongensis HLHK9]
          Length = 359

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/269 (39%), Positives = 156/269 (57%), Gaps = 6/269 (2%)

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E SD  +R+ +     Q   L     D  + +LEV AG GG E+  +A  L RMY+R+AE
Sbjct: 81  ELSDGQERLAVLELELQKLLLPKDPNDERNIFLEVRAGTGGDEAALFAADLFRMYSRYAE 140

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           + +++ E +   + +  G K     I G  AY  LK E G HR+ R+   ++  R HTS 
Sbjct: 141 RNRWQVEIVSASENDLGGFKEVIARIVGFGAYSRLKFESGGHRVQRVPATETQGRIHTSA 200

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ V P  D+   +E++ +D RIDT+RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +
Sbjct: 201 CTVAVMPEADELAAVELNPADLRIDTFRASGAGGQHINKTDSAVRVTHLPTGIVVECQDD 260

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           RSQHKNKA+A  +L A++ +++ + R++        K+ IG G    +IR+Y   P   V
Sbjct: 261 RSQHKNKARALAVLAARIQDVQQRARQQ--KEAAERKSLIGSGDRSERIRTYNF-PQGRV 317

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            D R N+       V+DGDL +   A  A
Sbjct: 318 TDHRINLTLYRLDAVMDGDLAELTDALTA 346


>gi|58038522|ref|YP_190486.1| peptide chain release factor 1 [Gluconobacter oxydans 621H]
 gi|81557234|sp|Q5FUR9|RF1_GLUOX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58000936|gb|AAW59830.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter
           oxydans 621H]
          Length = 353

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 146/242 (60%), Gaps = 9/242 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+   AGG E+  +A  L   Y R++E+  ++ E +E  + E AG+K     
Sbjct: 102 ADERSAILEIRPAAGGDEAGLFAAELFDAYRRFSEQNGWRFEVMEYAENEVAGLKEGMAT 161

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G + +  LK E GVHR+ R+   +S  R HTS  ++ V P  ++ +++ +++ D RID
Sbjct: 162 ISGRSVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVTVNDDDLRID 220

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVR+TH+P+G+VV  Q+E+SQHKNKA+A  +LRA+LYE E   
Sbjct: 221 VYRASGAGGQHVNKTESAVRVTHMPSGIVVAMQEEKSQHKNKAKAMKILRARLYERE--- 277

Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           R ++ A      K+++G G    +IR+Y   P   V D R N+       ++ G+ D+ +
Sbjct: 278 RAQLHATRAADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRIMGGEFDEII 336

Query: 348 KA 349
            A
Sbjct: 337 DA 338


>gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 395

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 8/245 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K + ++I + +  G K A+ 
Sbjct: 140 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 199

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G + YG LK E G+HR+ RI   + + R HTS  S+ + P  D+ +++++   D RI
Sbjct: 200 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 258

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH N+A+A  +L A+LYE+E  
Sbjct: 259 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERL 318

Query: 291 KREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDF 346
           + +  ++  +    +IG G    +IR+Y   P   V D R  I   +  D++ G +LD F
Sbjct: 319 RIQ--SSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMF 375

Query: 347 MKATL 351
           + A L
Sbjct: 376 IDALL 380


>gi|332521778|ref|ZP_08398229.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
 gi|332042608|gb|EGI78809.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
          Length = 358

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 144/232 (62%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+ AG GG E+  +A  L RMYT++ E + ++ + ++  +G   G K     +
Sbjct: 106 DAKNAVVELRAGTGGDEASIFAGDLYRMYTKYCESKGWRVDTVDYSEGTNGGFKEIQFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +++ V+P  ++  ++EI   D RID 
Sbjct: 166 SGDDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVEIDPKDVRIDY 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKK 284

Query: 293 -EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            EE A +  +  T      +IR+Y   P   V D R  +     S++++GD+
Sbjct: 285 MEEDAALRGTMVTSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLSNIVNGDI 335


>gi|299821847|ref|ZP_07053735.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
 gi|299817512|gb|EFI84748.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
          Length = 358

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 190/349 (54%), Gaps = 16/349 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           ++D   +V+ R   LN    DP +  +    + L +E+  +   +      KE+ D++ +
Sbjct: 1   MYDRLQSVENRYEELNELLSDPDVVSDPKRLRDLSKEQSSISQTVETYRDYKEVTDQIAE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              LL   L++D   + +E  + LQ  K  +E K    L+  +  D  +  +E+   AGG
Sbjct: 61  TKELLNEKLDDDMREMAKEELNELQENKTHLEEKLKLLLVPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE R +K E ++ +     G K   ++I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLFRMYSRYAESRGWKAEIMDANPTGIGGYKEVIVMINGDGAFSRLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ + P  +D +EI+I + D R DT+ ++GAGGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAED-VEIDIQDKDIRTDTFASTGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305
           SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K+ 
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQIKNKEKAMKVLRARIYDKFEREAREEYDAN----RKSA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   V D R  +       V++G +D+ + A +
Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVMEGKIDEIIDALI 343


>gi|126736399|ref|ZP_01752141.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
 gi|126714220|gb|EBA11089.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
          Length = 351

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 149/250 (59%), Gaps = 8/250 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    AD+  A LE+  G GG E+  +A  LLRMY R+AE + ++ E LE    E 
Sbjct: 92  QLALLPKDAADARPALLEIRPGTGGDEAGLFAADLLRMYQRYAEGQGWRFEILEESLSEL 151

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K     I G   +  +K E GVHR+ R+   +S  R HTS +++ V P  +D ++IE
Sbjct: 152 GGVKEVVARIVGDGVFAKMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIE 210

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RIDT RASG+GGQHVNTTDSAVRI HIPTG++V    E+SQH+N+  A  +L+ 
Sbjct: 211 INANDLRIDTMRASGSGGQHVNTTDSAVRILHIPTGMIV-VSSEKSQHRNREIAMQVLKT 269

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +L++LE QK ++        K ++G G    +IR+Y   P   + D R N+   S + V+
Sbjct: 270 RLFDLERQKVDD--ERSADRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYSLNQVM 326

Query: 340 DGDLDDFMKA 349
            GDL++ + A
Sbjct: 327 QGDLEEIVNA 336


>gi|163850388|ref|YP_001638431.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218528948|ref|YP_002419764.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240137464|ref|YP_002961935.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254559642|ref|YP_003066737.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
 gi|226739112|sp|A9W1A4|RF1_METEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790888|sp|B7L246|RF1_METC4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163661993|gb|ABY29360.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218521251|gb|ACK81836.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240007432|gb|ACS38658.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254266920|emb|CAX22719.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
          Length = 361

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 147/242 (60%), Gaps = 8/242 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +A  L RMY R+AE + ++ E +   +G   G +     
Sbjct: 108 ADEKSAILEIRAGTGGDEAALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVVAE 167

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG + +  LK E G HR+ R+   ++  R HTS +++ V P  ++ ++I ++E+D +ID
Sbjct: 168 VKGRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEE-VDIVVNEADLKID 226

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+RITHIPTGVVV  Q+ERSQHKN+A+A ++LR+KL++ E   
Sbjct: 227 TMRAQGAGGQHVNKTESAIRITHIPTGVVVFVQEERSQHKNRARAMSLLRSKLFDAERTA 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           ++  +      K ++G G    +IR+Y   P   V D R N+      +V+ G  LD+ +
Sbjct: 287 KD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGQALDEVI 343

Query: 348 KA 349
            A
Sbjct: 344 DA 345


>gi|300858256|ref|YP_003783239.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685710|gb|ADK28632.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205977|gb|ADL10319.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           C231]
 gi|302330530|gb|ADL20724.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           1002]
 gi|308276212|gb|ADO26111.1| Peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis I19]
          Length = 356

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/249 (42%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +EV AGAGG E+  +A  L+RMY R+A+K  F  E L+  + +  G+K  TL I
Sbjct: 102 DGDDIVMEVKAGAGGEEAALFAGELVRMYQRYADKHGFAIEVLDSSESDLGGVKDMTLSI 161

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P+   A+   K E GVHR+ R+   +S  R  TS + + VYP  D+  EIEI + D
Sbjct: 162 RSKTPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKD 221

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  +
Sbjct: 222 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQSM 281

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++ E  A  G +++   +    +IR+Y   P   + D R   +  +   VL+G+LDD 
Sbjct: 282 AEEQAEAEAAEGRAAQIRTMDRSERIRTYNW-PENRISDHRIGFKANNLDSVLNGELDDL 340

Query: 347 MKATLAIKK 355
             A  A ++
Sbjct: 341 FTALRAAER 349


>gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226739101|sp|B8DLL6|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris]
 gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 357

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 139/227 (61%), Gaps = 7/227 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +A  L RMY+R+AE R +K E L  ++ +  G K    LI G   Y
Sbjct: 111 VEIRAGTGGEEAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVY 170

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E G HR+ R+   +S  R HTS +++ + P  ++ +++EI   D RID +RASGA
Sbjct: 171 SRLKFESGTHRVQRVPATESQGRIHTSAATVAILPEAEE-VDVEIRPDDIRIDVFRASGA 229

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITH+P+G+VV CQ E+SQHKNKA+A  +L ++L + E  ++     +
Sbjct: 230 GGQHVNKTESAVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHN--EM 287

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
               ++++G G    +IR+Y   P   V D R N+   S   V++G+
Sbjct: 288 AADRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLDRVMEGE 333


>gi|156742398|ref|YP_001432527.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
 gi|156233726|gb|ABU58509.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
          Length = 364

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/309 (37%), Positives = 174/309 (56%), Gaps = 13/309 (4%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQF 104
           RE + L  A    ++++ ++ D   LLE   ++D   + Q+  D+L  +R +LE + K  
Sbjct: 43  RELEPLVEAYRAYRDVERQIEDTSFLLEHETDQDVRQLAQDELDHLLERRAQLEQQIKVL 102

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             L     DS +A +E+  G GG E+  +A  L RMYTR+AE+R +  E +   +    G
Sbjct: 103 -LLPRDPNDSKNAIMELRQGEGGDEAALFAADLFRMYTRYAEQRGWDIEVISATENGPGG 161

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     ++G  AY  LK E GVHR+ R+   ++  R HTS +++ V P V+++ +IE++
Sbjct: 162 YKEIIFEVRGEGAYSRLKYEGGVHRVQRVPATEARGRIHTSTATVAVLPEVEET-DIELN 220

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLR 281
            SD R+D +R+ G GGQ VNTTDSAVRI +    P  +VV CQ  RSQ KNKA A  +LR
Sbjct: 221 PSDYRVDVFRSGGHGGQGVNTTDSAVRIVYKPGTPEEIVVTCQDSRSQLKNKASALAVLR 280

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A+LY  E +KR +   +GE+   ++G G    +IR+Y   P   V D R     ++   +
Sbjct: 281 ARLYAREEEKRRK--ELGETRLAQVGAGERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGI 337

Query: 339 LDGDLDDFM 347
           LDGDLD  +
Sbjct: 338 LDGDLDRLI 346


>gi|327441448|dbj|BAK17813.1| protein chain release factor A [Solibacillus silvestris StLB046]
          Length = 358

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 187/347 (53%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68
           +FD   AV+ R   LN    DP +  +  + +   +E+   Q + +     K ++++L D
Sbjct: 1   MFDRLQAVEDRYERLNELLSDPDIVSDSNKLREYSKEQSDIQEMVDVYRVYKSVKEQLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              L+E+  + +   +++E  ++L +   E+E +    L+  +  DS +  +E+   AGG
Sbjct: 61  TRELMEIEKDAEMLEMMKEEFNDLNKQVPELEERLRILLIPKDPNDSKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +K + +E       G K   L+I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYTRYAETQGWKVDVMEATPNPAGGYKEVILMINGQGAYSKFKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V    ++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVHVE-DVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +L A++   +  ++E  A I  + KT +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILVARV--ADKHRQEAQAEIDATRKTAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALI 343


>gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
 gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
          Length = 356

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/266 (38%), Positives = 153/266 (57%), Gaps = 14/266 (5%)

Query: 93  QRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           QR  LE E K    LL    D ND     LE+ AG GG E+  +A  L RMY+R+AE  +
Sbjct: 85  QRDALESEIK----LLLLPKDPNDDKSVILEIRAGTGGDEAALFAGDLFRMYSRFAETNR 140

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E +   + E+ G K     ++G   +  LK E G HR+ R+   ++  R HTS  ++
Sbjct: 141 WRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTV 200

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ERSQ
Sbjct: 201 AIMPEAED-VDIDINPTDLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQEERSQ 259

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+A+A  +L+ ++ +  LQ  E+ A +    K ++G G    +IR+Y   P   + D 
Sbjct: 260 IKNRAKAMKVLKTRILDNILQ--EQNAKLAADRKQQVGSGDRSERIRTYNF-PQGRMTDH 316

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           R  +       ++ GD+ +   A  A
Sbjct: 317 RIGLTLYRLDAIMAGDIAEIADALRA 342


>gi|146337703|ref|YP_001202751.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
 gi|146190509|emb|CAL74508.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
          Length = 361

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 8/257 (3%)

Query: 90  DNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           D L   + E+E K   +LL  +A D  +  LE+ AG GG E+  +A  L RMY R+A  +
Sbjct: 84  DELVARRGELEQKIRIALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQ 143

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E +   +G   G K     ++G  A+  LK E GVHR+ R+   ++  R HTS ++
Sbjct: 144 GWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAAT 203

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P ++D ++++I + D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV  Q  RS
Sbjct: 204 VAVLPEIED-VDVDIKQDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRS 262

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325
           QHKN+A A N+LR+++Y+ E QK +  A      K ++G G    +IR+Y   P   V D
Sbjct: 263 QHKNRASAMNILRSRIYDAERQKVD--AARSAERKEKVGSGDRSERIRTYNF-PQGRVTD 319

Query: 326 LRTNIEKTSPSDVLDGD 342
            R N+       V+ G+
Sbjct: 320 HRINLTLYKLPQVIAGE 336


>gi|330444669|ref|YP_004377655.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
 gi|328807779|gb|AEB41952.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
          Length = 363

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 185/343 (53%), Gaps = 16/343 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCDNLILLELA 76
           + RL  +  +   P ++ +  E K L +E      L  A + ++E +  L D+   L + 
Sbjct: 11  LSRLEEIEVRLSSPEIFDHPEEYKALSKEHARLSELKEAYAQLQEQEKILADDKQALSME 70

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND--AYLEVHAGAGGTESQD 132
            + +  ++L+E    L   K E E   K  E+LL      +D    +E+ AG GG E+  
Sbjct: 71  KDPEMIAMLEE---GLVEGKAETERLRKVLENLLVPPDPDDDLNVIMELRAGTGGEEAAL 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  ++  + +K E L   + +  G K   + I G     +L+ E G HR+ R
Sbjct: 128 FVGDCVRMYHLYSAAKGWKYEVLSSSESDLKGYKEYVMGISGTGVKRFLQYEAGTHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ + P   +  EI I E D RIDT+RASGAGGQHVN TDSAVRI
Sbjct: 188 VPETETQGRVHTSAITVAILPEPAEDDEIIIDEKDLRIDTFRASGAGGQHVNVTDSAVRI 247

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV CQ ERSQHKNK +A  +L+A++ + E+QKR++ A+   S+  ++G G   
Sbjct: 248 THLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRQKEASAMRSA--QVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y     + V D R  +   S   V++GDLD    A ++
Sbjct: 306 ERIRTYNFSQNR-VTDHRIGLTLYSLDKVMEGDLDPITTALVS 347


>gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
 gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
          Length = 356

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 138/240 (57%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMYTR+AE + +K E +     E  G K    LI
Sbjct: 105 DEKNTILEIRAGTGGEEAALFAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   ++  R HTS +++ V P  ++ +++EI   D RID 
Sbjct: 165 AGDRVYSRLKFEAGTHRVQRVPATETQGRIHTSAATVAVMPEAEE-VDVEIRPEDLRIDI 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITH+PT  VV CQ ERSQHKNKA+A  +L +++   E +++
Sbjct: 224 YRASGAGGQHVNKTESAVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + +    K ++G G    +IR+Y   P     D R N+   S   +++G+L     A
Sbjct: 284 N--SELSADRKAQVGSGDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELTPLFDA 340


>gi|315122704|ref|YP_004063193.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496106|gb|ADR52705.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 357

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 147/243 (60%), Gaps = 10/243 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AG GG+E+  +   L RMY R+A  +K+K E L   D ++ G K     I
Sbjct: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYATYQKWKVEILSSSDNDDGGYKEIVATI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +  +K E GVHR+ R+   +++ R HTS +++ V P  ++ I++ I+  D RIDT
Sbjct: 168 SGNGVFYRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAEE-IDVAIATEDIRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG+GGQHVNTTDSAVRITHIPTG++V    E+SQH+N+ QA  +LRA+LY++E   R
Sbjct: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLQAMKVLRARLYDIE---R 282

Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           + +A+   E+ K +IG G    +IR+Y   P   + D R N+       VL G LD+ + 
Sbjct: 283 KRMAHERSENRKAQIGSGDRSERIRTYNF-PQGRITDHRINLTLYKLEYVLQGYLDEIVN 341

Query: 349 ATL 351
           A L
Sbjct: 342 ALL 344


>gi|162147699|ref|YP_001602160.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542323|ref|YP_002274552.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|189039975|sp|A9HJ50|RF1_GLUDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161786276|emb|CAP55858.1| putative peptide chain release factor 1 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530000|gb|ACI49937.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 352

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 140/242 (57%), Gaps = 7/242 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD   A LE+   AGG E+  +A  L   Y R+A  R ++ E +E  + E  G++    
Sbjct: 100 EADERSAILEIRPAAGGDEAALFAAELFDAYRRYAALRGWRFEIMEFDESELGGLREGIA 159

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +  LK E GVHR+ R+   +S  R HTS  ++ V P   D ++++I++ D RI
Sbjct: 160 NITGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAGD-VDVQINDGDLRI 218

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D YRASGAGGQHVN T+SAVRITH+PTG+VV  Q+E+SQHKN+A+A  +L A+LYE E  
Sbjct: 219 DVYRASGAGGQHVNKTESAVRITHLPTGLVVAMQEEKSQHKNRAKAMKILMARLYERERA 278

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
                       K+++G G    +IR+Y   P   V D R N+       V+ G+ D+F+
Sbjct: 279 AAHATRA--ADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTAYKIDRVMMGEFDEFV 335

Query: 348 KA 349
            A
Sbjct: 336 DA 337


>gi|313676496|ref|YP_004054492.1| bacterial peptide chain release factor 1 (brf-1) [Marivirga
           tractuosa DSM 4126]
 gi|312943194|gb|ADR22384.1| bacterial peptide chain release factor 1 (bRF-1) [Marivirga
           tractuosa DSM 4126]
          Length = 355

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 154/259 (59%), Gaps = 8/259 (3%)

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           +R +LE E K+   +     DS +A LE+ AG GG E+  +A  L +MY R+ +K     
Sbjct: 87  ERDRLEEELKKM-LIPKDPNDSKNAVLEIRAGTGGDEAAIFAGDLFKMYQRFCDKNGLNL 145

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             L++  G   G K     + G NAYG LK E GVHR+ R+   ++  R HTS +++ V 
Sbjct: 146 TVLDLTFGTAGGYKEIISTVTGKNAYGTLKYESGVHRVQRVPQTETQGRVHTSAATVAVL 205

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD +E+EI  +D R DTY +SG GGQ VNTT SAVR+TH PTG+VV CQ ++SQ KN
Sbjct: 206 PEIDD-VEVEIDMNDVRKDTYCSSGPGGQSVNTTYSAVRLTHEPTGLVVTCQDQKSQIKN 264

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329
             +A  +LR++LYE+EL K+ E   +G   ++ +  G    +IR+Y   P   V D R N
Sbjct: 265 FDKALRVLRSRLYEIELAKQNE--EVGAQRRSIVRSGDRSDKIRTYNY-PQGRVTDHRIN 321

Query: 330 IEKTSPSDVLDGDLDDFMK 348
               +  ++++G+++D ++
Sbjct: 322 YTVHNLPNIMNGEIEDLIE 340


>gi|38233635|ref|NP_939402.1| peptide chain release factor 1 [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564890|sp|Q6NHU0|RF1_CORDI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|38199895|emb|CAE49561.1| peptide chain release factor 1 (RF-1) [Corynebacterium diphtheriae]
          Length = 356

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/249 (42%), Positives = 150/249 (60%), Gaps = 7/249 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +EV AGAGG E+  +A  L+RMY R+AEK  F  E L + + +  G+K  TL I
Sbjct: 102 DGDDIVMEVKAGAGGEEAALFAGELVRMYQRYAEKHGFTVEVLGLSESDLGGVKDMTLSI 161

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P+   A+   K E GVHR+ R+   +S  R  TS + + VYP  D+  E+EI + D
Sbjct: 162 RSKTPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVEIDDKD 221

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  +
Sbjct: 222 LRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAM 281

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++ E  A  G +++   +    +IR+Y   P   + D R   +  +   VL+GDLDD 
Sbjct: 282 AEEQAEAEAAEGRAAQIRTMDRSERIRTYNW-PENRISDHRIGYKANNLDSVLNGDLDDL 340

Query: 347 MKATLAIKK 355
             A  A ++
Sbjct: 341 FSALQAAER 349


>gi|293363656|ref|ZP_06610406.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
 gi|292552763|gb|EFF41523.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
          Length = 354

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 144/243 (59%), Gaps = 4/243 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E DS +  +E+   AGG E+  +A  L RMY +W+++   + + L+    E  G    T 
Sbjct: 103 ENDSKNVIVEIRGAAGGDEANIFAGDLFRMYQKWSDQNDMRLKVLDETRAEAGGFTLITF 162

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G   Y  LK E GVHR+ RI   ++  R HTS +++ V P +DD IEIE+   D R+
Sbjct: 163 TVTGEKPYSKLKFESGVHRVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEVKPEDIRV 222

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +R+SG GGQ VNTTDSAVR+TH  TG+VV CQ+ +SQ +NK  A  +L++KLY+LEL+
Sbjct: 223 DVFRSSGNGGQSVNTTDSAVRLTHNATGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELK 282

Query: 291 KREEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K++E  + G      +G+   +IR+Y   P   V D R +   TS S V++G ++  + +
Sbjct: 283 KKQEEES-GYRKLAGLGFRSEKIRTYNY-PQDRVTDHRISY-STSLSPVMEGKVNSIIDS 339

Query: 350 TLA 352
            L 
Sbjct: 340 LLT 342


>gi|108759492|ref|YP_633064.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
 gi|20139339|sp|Q93NC7|RF1_MYXXA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361565|sp|Q1D2Q9|RF1_MYXXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14517940|gb|AAK64443.1|AF377339_4 peptide chain release factor RF-1 [Myxococcus xanthus]
 gi|108463372|gb|ABF88557.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
          Length = 362

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 191/339 (56%), Gaps = 18/339 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL--- 77
           +R   L     +P +  +    + + +ER  L+  +   +  +  L D L  +E  L   
Sbjct: 10  RRFERLTADLSNPDVLADSARLQKVSKERAGLEKLVEAFRTYRKVLAD-LSEVEAWLGSS 68

Query: 78  EEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWA 134
           + D+ +  +E+   L  QR +LE   K    LL  +  D  +  LE+ AGAGG E+  +A
Sbjct: 69  DADEKAFARESLPGLKEQRDELEASLKIL--LLPKDPNDEKNVILEIRAGAGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             +++MY R+A++R +K + L++  G   G+K AT+ + G   +  +K E GVHR+ R+ 
Sbjct: 127 EEVMQMYLRYADRRGWKADILDMSPGNAGGVKDATVTLSGDAVFSSMKYESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  +D ++++++ +D  +   R++G+GGQ VNTTDSAVR+ H
Sbjct: 187 ATETQGRIHTSTITVSVMPEAED-VDVQVNPADIEMQVMRSTGSGGQSVNTTDSAVRLIH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS-KTEIGWG---R 310
            PTG+VV+CQQE+SQ KN+  A  MLRAKLY++E   +E I N  +S+ + ++G G    
Sbjct: 246 HPTGIVVKCQQEKSQLKNRTMAMRMLRAKLYDIE---QERIRNERDSARRAQVGTGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +IR+Y   P   + D R  +   +   V+ GD++D + A
Sbjct: 303 KIRTYNF-PQDRLTDHRIGLTVHNLPGVMAGDVEDVITA 340


>gi|85705322|ref|ZP_01036421.1| peptide chain release factor 1 [Roseovarius sp. 217]
 gi|85670195|gb|EAQ25057.1| peptide chain release factor 1 [Roseovarius sp. 217]
          Length = 426

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 151/256 (58%), Gaps = 14/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L   EA++  A LE+  G GG E+  +A  L+RMY R+AE R +  + +E    E 
Sbjct: 168 QLALLPRDEANARPAILEIRPGTGGEEAALFAADLMRMYQRYAEARGWVFDVIEEQQSEL 227

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            GI+   + IKG   +  LK E GVHR+ R+   +S  R HTS +++ V P  +D ++++
Sbjct: 228 GGIRELVVHIKGEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDVQ 286

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RIDT R+SGAGGQHVNTTDSAVRITHIP+G+VV    E+SQH+N+  A  +L++
Sbjct: 287 INPNDLRIDTMRSSGAGGQHVNTTDSAVRITHIPSGIVV-TSSEKSQHRNREIAMQVLKS 345

Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +L+++E  + +        A +G   ++E     +IR+Y   P   + D R N+      
Sbjct: 346 RLFDMERSRVDSERSANRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLE 399

Query: 337 DVLDGDLDDFMKATLA 352
            V+ GDLD+ + A  A
Sbjct: 400 QVMGGDLDEVIDALTA 415


>gi|217977729|ref|YP_002361876.1| peptide chain release factor 1 [Methylocella silvestris BL2]
 gi|254790890|sp|B8EI32|RF1_METSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217503105|gb|ACK50514.1| peptide chain release factor 1 [Methylocella silvestris BL2]
          Length = 360

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 144/242 (59%), Gaps = 8/242 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LEV AG GG E+  +A  L RMY R+AE + +  E +  ++G   G K     
Sbjct: 105 ADERSAILEVRAGTGGDEAALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIAE 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E G HR+ R+   ++  R HTS +++ V P   + +++EI+E+D +ID
Sbjct: 165 IAGRGVFAKLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAQE-VDVEINEADLKID 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+RITHIPTG +V  Q ERSQHKN+A+A  +LR+++Y+ + QK
Sbjct: 224 TMRAQGAGGQHVNKTESAIRITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQK 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
            +  A      ++++G G    +IR+Y   P   V D R N+       V+ G+ LD+ +
Sbjct: 284 LD--AERAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVITGEALDEVI 340

Query: 348 KA 349
            A
Sbjct: 341 DA 342


>gi|94502363|ref|ZP_01308828.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833646|ref|YP_001597842.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
 gi|94451077|gb|EAT14037.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206135|gb|ABS30445.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
          Length = 355

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 163/287 (56%), Gaps = 16/287 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLE A+ E   ++L+          LE   K+ E LL    ++N+  +E+ AG GG E+ 
Sbjct: 79  LLEFAIFEKKKNLLE----------LEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEAC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + ++  +K E L +  G   G K   + I+G N YG LK E GVHR+ 
Sbjct: 129 IFVENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  D +  I I  SD + +T+RASGAGGQHVN T+SA+R
Sbjct: 189 RVPSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL+ + E   + +  K+ I  G  
Sbjct: 249 LTHIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N         ++G +++ + A   ++K
Sbjct: 307 SAKIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITALKILEK 352


>gi|88803826|ref|ZP_01119349.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
 gi|88780354|gb|EAR11536.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
          Length = 358

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 172/306 (56%), Gaps = 11/306 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNL-----ILLELALEEDDCSILQETSDNLQRI-KLE 98
           LM+E + L N +    E Q  L DN+     IL E +  E +     E  +   RI KLE
Sbjct: 34  LMKEYKDLGNVVEKGDEYQ-ALIDNIEEAKEILAEGSDAEMNEMAKSEIDEANSRIPKLE 92

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            E + F  + +   DS +A +E+ AG GG E+  +A  L RMY+++ E + +K   ++  
Sbjct: 93  EEIR-FLLIPTDPEDSKNAVVELRAGTGGDEASIFAGDLFRMYSKYCESKGWKVATVDYS 151

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G   G K     + G + YG LK E GVHR+ R+   ++  R HTS ++  V+P  ++ 
Sbjct: 152 EGTNGGFKEIQFEVNGADVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATCMVFPEAEE- 210

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            ++EI+  D RID + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ 
Sbjct: 211 FDVEINPKDVRIDFFCSSGPGGQSVNTTYSAVRLTHVPTGLVAQCQDQKSQHKNKEKAFK 270

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +LR++LY++EL K+     +   S    G    +IR+Y     + V D R  +      +
Sbjct: 271 VLRSRLYDMELAKKNAEDALKRGSMVSSGDRSAKIRTYNYAQGR-VTDHRIGLSLYDLPN 329

Query: 338 VLDGDL 343
           +++GD+
Sbjct: 330 IMNGDI 335


>gi|326332906|ref|ZP_08199163.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
 gi|325949264|gb|EGD41347.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
          Length = 359

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/247 (41%), Positives = 147/247 (59%), Gaps = 10/247 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  DA LEV +G GG ES  +A  LLRMYTR+AE++ +K E L+  + +  G KS T+ +
Sbjct: 102 DDKDAILEVKSGEGGEESALFAGDLLRMYTRYAERQGWKLEFLDATESDLGGYKSVTVAV 161

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   Y  LK E GVHR+ R+   +S  R HTS + + V P  +  +++EI++
Sbjct: 162 KAKGNPEPGRAPYALLKFEGGVHRVQRVPVTESQGRVHTSAAGVLVVPEAE-PVDVEIND 220

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQ +NK QA  +LR++L 
Sbjct: 221 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVSMQNEKSQLQNKEQAMRVLRSRLL 280

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +      +  A+    S+   +    +IR+Y   P   + D RT  +  +   VLDGDL+
Sbjct: 281 QAAQDAADAEASDARRSQVRTVDRSERIRTYNF-PENRISDHRTGYKSYNLDQVLDGDLE 339

Query: 345 DFMKATL 351
             + + +
Sbjct: 340 PVIGSAV 346


>gi|254382315|ref|ZP_04997675.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
 gi|194341220|gb|EDX22186.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
          Length = 359

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LEV AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVLLEVKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVS 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           ++          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +E+
Sbjct: 159 VRTKGGNGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINMNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L    +    +E +++  S    +    +IR+Y   P   + D RT  +  +   VLD
Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRSVDRSEKIRTYNY-PENRISDHRTGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDSIIQACV 347


>gi|50842731|ref|YP_055958.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289425142|ref|ZP_06426919.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|295130812|ref|YP_003581475.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|50840333|gb|AAT83000.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289154120|gb|EFD02808.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|291375831|gb|ADD99685.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|313764216|gb|EFS35580.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA1]
 gi|313772062|gb|EFS38028.1| peptide chain release factor 1 [Propionibacterium acnes HL074PA1]
 gi|313791908|gb|EFS40009.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA1]
 gi|313810262|gb|EFS47983.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA1]
 gi|313812711|gb|EFS50425.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA1]
 gi|313816309|gb|EFS54023.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA1]
 gi|313818790|gb|EFS56504.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA2]
 gi|313820562|gb|EFS58276.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA1]
 gi|313822633|gb|EFS60347.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA2]
 gi|313827397|gb|EFS65111.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA2]
 gi|313830592|gb|EFS68306.1| peptide chain release factor 1 [Propionibacterium acnes HL007PA1]
 gi|313833628|gb|EFS71342.1| peptide chain release factor 1 [Propionibacterium acnes HL056PA1]
 gi|313838323|gb|EFS76037.1| peptide chain release factor 1 [Propionibacterium acnes HL086PA1]
 gi|314915694|gb|EFS79525.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA4]
 gi|314917937|gb|EFS81768.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA1]
 gi|314920320|gb|EFS84151.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA3]
 gi|314924927|gb|EFS88758.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA3]
 gi|314931540|gb|EFS95371.1| peptide chain release factor 1 [Propionibacterium acnes HL067PA1]
 gi|314957925|gb|EFT02028.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA1]
 gi|314960548|gb|EFT04650.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA2]
 gi|314962564|gb|EFT06664.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA1]
 gi|314967573|gb|EFT11672.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA1]
 gi|314973593|gb|EFT17689.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA1]
 gi|314975815|gb|EFT19910.1| peptide chain release factor 1 [Propionibacterium acnes HL045PA1]
 gi|314983706|gb|EFT27798.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA1]
 gi|314987887|gb|EFT31978.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA2]
 gi|314989698|gb|EFT33789.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA3]
 gi|315084734|gb|EFT56710.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA2]
 gi|315085418|gb|EFT57394.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA3]
 gi|315095866|gb|EFT67842.1| peptide chain release factor 1 [Propionibacterium acnes HL038PA1]
 gi|315098771|gb|EFT70747.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA2]
 gi|315101459|gb|EFT73435.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA1]
 gi|315105832|gb|EFT77808.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA1]
 gi|315108751|gb|EFT80727.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA2]
 gi|327326418|gb|EGE68208.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA2]
 gi|327329874|gb|EGE71628.1| peptide chain release factor 1 [Propionibacterium acnes HL097PA1]
 gi|327445686|gb|EGE92340.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA2]
 gi|327448330|gb|EGE94984.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA1]
 gi|327450545|gb|EGE97199.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA3]
 gi|327453373|gb|EGF00028.1| peptide chain release factor 1 [Propionibacterium acnes HL092PA1]
 gi|328753199|gb|EGF66815.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA2]
 gi|328753962|gb|EGF67578.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA1]
 gi|328754695|gb|EGF68311.1| peptide chain release factor 1 [Propionibacterium acnes HL020PA1]
 gi|328760891|gb|EGF74456.1| peptide chain release factor 1 [Propionibacterium acnes HL099PA1]
          Length = 361

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +RL  + T+  D  +  +      L +    L + +S    + D+L  ++   E  
Sbjct: 10  DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    L+  ++ L R +L++   +   LL  S   D  DA +E+H+G GG ES  +A
Sbjct: 69  TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191
             LLRMYTR+AE+  +    L     +  G ++  + + G P+  AYG+LK E GVHR+ 
Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302
           +TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+          E +  +R+++  +  S+
Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        +R+Y   P   + D R   +      +L GDL D + A
Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|194335257|ref|YP_002017051.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|238693362|sp|B4SAR5|RF1_PELPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194307734|gb|ACF42434.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 357

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 145/241 (60%), Gaps = 4/241 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSAT 169
           EADS +  +E+ AG GG E+  +A  L RMY R+AE + ++ E L  ++     G +  T
Sbjct: 104 EADSRNVIIEIRAGTGGEEAALFAADLTRMYQRYAEHQGWQCETLHFNESSVPGGFREIT 163

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           L + G + YG +K E GVHR+ R+   ++  R HTS  S+ V P  ++ +++EI   D R
Sbjct: 164 LSVNGHDVYGTMKYESGVHRVQRVPDTETQGRIHTSAVSVAVLPEAEE-VDVEIRREDLR 222

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            DTYR+ G GGQ+VN  ++AVRITH+PTG+V  CQ++RSQ +NK +A  MLR KLY+++L
Sbjct: 223 FDTYRSGGKGGQNVNKVETAVRITHMPTGIVSACQEQRSQLQNKERAMQMLRTKLYDIQL 282

Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +++++ A++  S  T      +IR+Y   P   V D R      +   +L GDL D + 
Sbjct: 283 AEQQQQRADLRRSMVTTGDRSAKIRTYNY-PQSRVTDHRIAFTSHALPQILQGDLQDIIN 341

Query: 349 A 349
           A
Sbjct: 342 A 342


>gi|126663551|ref|ZP_01734548.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
 gi|126624499|gb|EAZ95190.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
          Length = 357

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 154/264 (58%), Gaps = 6/264 (2%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L E  D L +++ E+   +F  +     D+ +  +E+ AG GG E+  +A  L RMYT++
Sbjct: 81  LDEAKDRLPQLEEEI---KFMLIPKDPEDAKNVMVEIRAGTGGDEASIFAGDLFRMYTKY 137

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            E R ++T  ++I +G   G K     + G + YG LK E GVHR+ R+   ++  R HT
Sbjct: 138 CEARGWRTSVVDISEGTSGGFKEVIFEVTGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 197

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P  ++  +++I  +D R+D + +SG GGQ VNTT SAVR+THIPTG+V QCQ
Sbjct: 198 SAATVMVLPEAEE-FDVQIDMNDVRVDFFCSSGPGGQSVNTTKSAVRLTHIPTGLVAQCQ 256

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323
            ++SQHKNK +A ++LR++LYE EL  ++       SS+   G    +IR+Y     + V
Sbjct: 257 DQKSQHKNKDKALDVLRSRLYEKELAIKQAEDATKRSSQVSSGDRSAKIRTYNYSQGR-V 315

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFM 347
            D R  ++      V++G +  F+
Sbjct: 316 TDHRIGLDVFDMDGVMNGKIQKFV 339


>gi|294501881|ref|YP_003565581.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
 gi|294351818|gb|ADE72147.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
          Length = 355

 Score =  176 bits (446), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 184/345 (53%), Gaps = 12/345 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   AV+ R   LN    DP +  N  + +   +E+  +   ++  +E +D   +L +
Sbjct: 1   MFDRLEAVEARYEKLNELLSDPEIVNNPSKLREYSKEQSDIQQTVAAYQEYKDVKEQLSE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  + E VE  +   +     D  +  +EV   AGG
Sbjct: 61  AKTMLEDKLDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVIMEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAYSKMKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PT  VV CQ E+SQ KNK +A  +LRA++Y+ + Q RE  A    + K  +G
Sbjct: 240 SAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-REAQAEYDATRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    +IR+Y   P   V D R  +       +L+G LD+ + A
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEIIDA 341


>gi|293977757|ref|YP_003543187.1| bacterial peptide chain release factor 1 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667688|gb|ADE35323.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Sulcia
           muelleri DMIN]
          Length = 352

 Score =  176 bits (446), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 160/281 (56%), Gaps = 16/281 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLE A+ E   ++L+          LE   K+ E LL    ++N+  +E+ AG GG E+ 
Sbjct: 79  LLEFAIFEKKKNLLE----------LEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEAC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + ++  +K E L +  G   G K   + I+G N YG LK E GVHR+ 
Sbjct: 129 IFVENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  D +  I I  SD + +T+RASGAGGQHVN T+SA+R
Sbjct: 189 RVPSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL+ + E   + +  K+ I  G  
Sbjct: 249 LTHIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   V D R N         ++G +++ + A
Sbjct: 307 SAKIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITA 346


>gi|89070966|ref|ZP_01158192.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
 gi|89043473|gb|EAR49687.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
          Length = 351

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 148/244 (60%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A +E+  G GG E+  +A  LLRMY R+A+ + +  E ++    E  GI+  T  
Sbjct: 101 ADARPAMIEIRPGTGGEEAALFAADLLRMYQRYADAKGWSFEIIDEQATELGGIRELTAR 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G   +  LK E GVHR+ R+   +S  R HTS +++ V P   D ++I+I+ +D RID
Sbjct: 161 VAGDGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAAD-VDIDIAPADIRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+ +L+++E Q+
Sbjct: 220 TMRASGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTRLFDMERQR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +      + K ++G G    +IR+Y   P   + D R N+      ++L GDLD+ + 
Sbjct: 279 ASD--ERSAARKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEEILGGDLDETID 335

Query: 349 ATLA 352
           A +A
Sbjct: 336 ALIA 339


>gi|317487895|ref|ZP_07946487.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325830623|ref|ZP_08164044.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
 gi|316913021|gb|EFV34538.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325487369|gb|EGC89811.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
          Length = 357

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 146/253 (57%), Gaps = 7/253 (2%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F  + +  AD  D  +E+ A AGG E+  +A  L +MY R+A  + +KTE +++   E 
Sbjct: 98  KFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGELYKMYERFASAQGWKTETMDMSASEA 157

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     +KG + Y  +K E GVHR+ R+   +S  R HTS +++ V P  D+ +E+E
Sbjct: 158 GGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-VEVE 216

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E+D RID YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK  A  +LRA
Sbjct: 217 INENDLRIDVYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRA 276

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +LYE  L   E+ A  G     +IG G    +IR+Y   P   V D R     T    +L
Sbjct: 277 RLYEKMLA--EQQAAEGAKRLAQIGSGDRSEKIRTYN-GPQDRVTDHRIGFNGTYNGVLL 333

Query: 340 DGDLDDFMKATLA 352
              L D + A  A
Sbjct: 334 GDGLGDVITALQA 346


>gi|314955551|gb|EFS99954.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA1]
          Length = 361

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +RL  + T+  D  +  +      L +    L + +S    + D+L  ++   E  
Sbjct: 10  DEVRRRLRDIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    L+  ++ L R +L++   +   LL  S   D  DA +E+H+G GG ES  +A
Sbjct: 69  TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191
             LLRMYTR+AE+  +    L     +  G ++  + + G P+  AYG+LK E GVHR+ 
Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302
           +TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+          E +  +R+++  +  S+
Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        +R+Y   P   + D R   +      +L GDL D + A
Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
 gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
          Length = 360

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 152/245 (62%), Gaps = 7/245 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D++D  +E+ AGAGG E+  +A  L RMY ++AEK     + L++ + +  G+K  T+
Sbjct: 103 EHDADDVIMEIKAGAGGEEAALFAGDLARMYQKYAEKAGLSWDVLDLSESDLGGVKDMTV 162

Query: 171 LIKGPN-----AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
            +K  N     A+  LK E GVHR+ RI   +S  R  TS + + VYP  ++   ++I E
Sbjct: 163 AVKAKNPSRDGAWSMLKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPEEVEAVDIDE 222

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +N+A+A  +L+A+L 
Sbjct: 223 KDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLQARLD 282

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +LE +K E  A  G +S+   +    +IR+Y   P   + D R N +  +   VLDG++D
Sbjct: 283 QLEREKAEAEAAEGRASQVRTMDRSERIRTYNW-PENRISDHRINYKSNNLDAVLDGNMD 341

Query: 345 DFMKA 349
           D + A
Sbjct: 342 DIITA 346


>gi|257791638|ref|YP_003182244.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
 gi|257475535|gb|ACV55855.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
          Length = 352

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 146/253 (57%), Gaps = 7/253 (2%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F  + +  AD  D  +E+ A AGG E+  +A  L +MY R+A  + +KTE +++   E 
Sbjct: 93  KFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGELYKMYERFASAQGWKTETMDMSASEA 152

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     +KG + Y  +K E GVHR+ R+   +S  R HTS +++ V P  D+ +E+E
Sbjct: 153 GGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-VEVE 211

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E+D RID YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK  A  +LRA
Sbjct: 212 INENDLRIDVYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRA 271

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +LYE  L   E+ A  G     +IG G    +IR+Y   P   V D R     T    +L
Sbjct: 272 RLYEKMLA--EQQAAEGAKRLAQIGSGDRSEKIRTYN-GPQDRVTDHRIGFNGTYNGVLL 328

Query: 340 DGDLDDFMKATLA 352
              L D + A  A
Sbjct: 329 GDGLGDVITALQA 341


>gi|85713812|ref|ZP_01044802.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
 gi|85699716|gb|EAQ37583.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
          Length = 358

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/280 (38%), Positives = 152/280 (54%), Gaps = 24/280 (8%)

Query: 81  DCSILQETSDNLQRIKLEVEYKQFES------------LLSGEA-DSNDAYLEVHAGAGG 127
           D  I    +D   R   E E    E+            LL  +A D  +  LEV AG GG
Sbjct: 61  DAMIADPATDAEMRAMAEAERPALEARNNELMQQIRIALLPKDAMDERNVMLEVRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+A  + +K E +   +G   G K     ++G  AY  +K E GV
Sbjct: 121 DEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAEVQGRGAYAKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++ +++EI   D RI+T RA GAGGQHVN T+
Sbjct: 181 HRVQRVPDTEAQGRVHTSAATVAVLPEAEE-VDVEIKPDDLRIETMRAQGAGGQHVNKTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTE 305
           SA+RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y++E Q+     N   S+  K +
Sbjct: 240 SAIRITHIPTGIVVNMQDSRSQHKNRASAMNILRSRIYDVERQR----INAARSADRKDQ 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +G G    +IR+Y   P   V D R N+       V+ GD
Sbjct: 296 VGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGD 334


>gi|302536943|ref|ZP_07289285.1| peptide chain release factor 1 [Streptomyces sp. C]
 gi|302445838|gb|EFL17654.1| peptide chain release factor 1 [Streptomyces sp. C]
          Length = 359

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/259 (40%), Positives = 147/259 (56%), Gaps = 29/259 (11%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVS 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           ++          G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +E+
Sbjct: 159 VRTKGGNGATEPGQGVWARMKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINMNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLYELEL---------QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           ++L              Q+R ++ ++  S K        IR+Y   P   + D RT  + 
Sbjct: 278 SRLLAAAQEAAEQEASDQRRSQVRSVDRSEK--------IRTYNF-PENRISDHRTGFKA 328

Query: 333 TSPSDVLDGDLDDFMKATL 351
            +   VLDGDLD  ++A +
Sbjct: 329 YNLDQVLDGDLDSVIQACV 347


>gi|327454116|gb|EGF00771.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA2]
          Length = 361

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +RL  + T+  D  +  +      L +    L + +S    + D+L  ++   E  
Sbjct: 10  DEVRRRLREIETQLADSAVLSDSSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    L+  ++ L R +L++   +   LL  S   D  DA +E+H+G GG ES  +A
Sbjct: 69  TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191
             LLRMYTR+AE+  +    L     +  G ++  + + G P+  AYG+LK E GVHR+ 
Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302
           +TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+          E +  +R+++  +  S+
Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        +R+Y   P   + D R   +      +L GDL D + A
Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
 gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
          Length = 358

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 145/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAERNAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDAVIQACV 347


>gi|313681233|ref|YP_004058971.1| bacterial peptide chain release factor 1 (brf-1) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154093|gb|ADR32771.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 355

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 149/250 (59%), Gaps = 15/250 (6%)

Query: 112 ADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           AD ND    Y+E+ AG GG E+  +   L   Y R+A+ + +K E +     +  G K  
Sbjct: 100 ADPNDKRNIYIELRAGTGGDEAAIFVGDLFNAYVRYADVKGWKIELMSSSPSDAGGYKEI 159

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
             LIKG   Y  LK E G HR+ R+   +S  R HTS  ++ V P VDD +E+ I+E+D 
Sbjct: 160 IALIKGEQVYSRLKYEAGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEVTINENDL 218

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +ID  R+SG+GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKNK +A  +L+A++YE++
Sbjct: 219 KIDVMRSSGSGGQSVNTTDSAVRITHLPTGIVVTNQDEKSQHKNKDKAMKILKARIYEMQ 278

Query: 289 LQKREEIANIGESS--KTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +++    A + E S  K ++G G    +IR+Y   P   + D R N+      +++ G L
Sbjct: 279 MEE----AKVKEMSERKEQVGTGDRSGRIRTYNY-PQNRISDHRINLTLYRLDEIMQGGL 333

Query: 344 -DDFMKATLA 352
            DD ++  +A
Sbjct: 334 MDDIIEPLIA 343


>gi|30425080|ref|NP_780583.1| peptide chain release factor 1-like, mitochondrial precursor [Mus
           musculus]
 gi|81874010|sp|Q8BJU9|RF1ML_MOUSE RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|26347595|dbj|BAC37446.1| unnamed protein product [Mus musculus]
 gi|74186873|dbj|BAE20502.1| unnamed protein product [Mus musculus]
 gi|148671619|gb|EDL03566.1| mitochondrial translational release factor 1-like [Mus musculus]
          Length = 373

 Score =  176 bits (445), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 159/279 (56%), Gaps = 11/279 (3%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           E +D   L E+   L + ++     Q  SLL  S E D +D  LEV AG GG E+  + +
Sbjct: 81  ENEDLKKLAESEIALCQKQITELKHQIISLLVPSEEMDGSDLILEVTAGVGGQEAMLFTS 140

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            +  MY ++A  +++  E LE    E  G++ A+  + GP AY  +K E GVHR+ R+  
Sbjct: 141 EMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASVGGPEAYRHMKFEGGVHRVQRVPK 200

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +   R HTS  ++ + P   + I++ I+  D RIDT RASGAGGQHVNTTDSAVRI H+
Sbjct: 201 TEKQGRIHTSTMTVAILPQPTE-IKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHL 259

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QI 312
           PTG++ +CQQERSQ KN+  A   LRA+LY + L+  EE A    + K ++G  GR  +I
Sbjct: 260 PTGIISECQQERSQLKNRELAMKKLRARLYSMHLE--EETAKRYNARKIQVGTKGRSEKI 317

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
           R+Y   P   V D R N         + GD  LDD +++
Sbjct: 318 RTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDDMIQS 355


>gi|209883257|ref|YP_002287114.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
 gi|229470351|sp|B6JA06|RF1_OLICO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209871453|gb|ACI91249.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
          Length = 358

 Score =  176 bits (445), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/280 (37%), Positives = 164/280 (58%), Gaps = 18/280 (6%)

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
           A+ E +  +LQE  +NL Q+I++        +LL  +A D  +  LEV AG GG E+  +
Sbjct: 75  AMAESERPVLQERQENLEQQIRI--------ALLPKDAMDERNVVLEVRAGTGGDEASLF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR+ R+
Sbjct: 127 AGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQGRGAFAKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +++ R HTS +++ V P  ++ I+I+I ++D RI+T RA GAGGQHVN T+SA+RIT
Sbjct: 187 PDTEASGRIHTSAATVAVLPEAEE-IDIDIKDTDLRIETMRAQGAGGQHVNKTESAIRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+VV  Q  RSQHKN+A A N+LR+++ + E Q+    +      + ++G G    
Sbjct: 246 HIPTGIVVMMQDSRSQHKNRASAMNILRSRILDAERQR--AASERSADRRGQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           ++R+Y   P   V D R N+       V+ G+ L++ + A
Sbjct: 304 RVRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALNELIDA 342


>gi|83859678|ref|ZP_00953198.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
 gi|83852037|gb|EAP89891.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
          Length = 357

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/317 (38%), Positives = 180/317 (56%), Gaps = 26/317 (8%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           A+ L   R+  + A + I++  DR      ++ELA EE      QE    L  ++ E++ 
Sbjct: 48  ARELKTARESFEEAEAIIEDGSDR-----DMVELAEEE-----RQELKKRLPGLERELQL 97

Query: 102 KQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                LL  +   +DA   LE+ AG GG E+  +A  L RMY R+A    +K + +E  +
Sbjct: 98  -----LLIPKDRDDDASIMLEIRAGTGGDEAALFAGDLFRMYERYASNHGWKVDVVEASE 152

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            E  G K     + G   +G +K E GVHR+ R+   +S  R HTS +++ V P   +++
Sbjct: 153 AEVGGYKEIVASVSGKGVFGKMKFESGVHRVQRVPVTESGGRIHTSAATVAVLPE-PENV 211

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           EI+I + D RIDT RASGAGGQHVN T+SAVR+THIPTG+VV    E+SQH+N+A A  +
Sbjct: 212 EIDIKDEDIRIDTMRASGAGGQHVNKTESAVRMTHIPTGIVV-VSSEKSQHQNRAIAMQV 270

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L+A+LYE E ++++E A   E  K ++G G    +IR+Y   P   V D R N+      
Sbjct: 271 LKARLYEKERREKDE-ARAAE-RKGQVGSGDRSERIRTYNF-PQGRVSDHRINLTLYKLD 327

Query: 337 DVLDGD-LDDFMKATLA 352
           ++L GD LD+ + A L+
Sbjct: 328 EILSGDALDEVIDALLS 344


>gi|182677881|ref|YP_001832027.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|238691232|sp|B2IHL7|RF1_BEII9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182633764|gb|ACB94538.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 358

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 150/251 (59%), Gaps = 9/251 (3%)

Query: 106 SLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           +LL  +AD    A LE+ AG GG E+  +A  L RMY R+AE + +  E L + +G   G
Sbjct: 98  ALLPKDADDEKSAILEIRAGTGGDEAALFAGDLFRMYQRYAEAKGWGVEILSVSEGTAGG 157

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     I G   +  LK E G HR+ R+   ++  R HTS +++ V P  ++ +++EI+
Sbjct: 158 YKEIVAEITGKGVFAKLKFESGTHRVQRVPDTETQGRIHTSAATVAVLPQAEE-VDVEIN 216

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D +IDT RA GAGGQHVN T+SA+RITH+PTG V+  Q ERSQHKN+A+A ++LR+++
Sbjct: 217 EADLKIDTMRAQGAGGQHVNKTESAIRITHLPTGTVIFVQDERSQHKNRARAMSLLRSRI 276

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ + Q+ E  A      K ++G G    +IR+Y   P   + D R N+       V+ G
Sbjct: 277 YDAKRQQLE--AERAADRKAQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDKVMTG 333

Query: 342 D-LDDFMKATL 351
           + LD+ + A +
Sbjct: 334 EALDEVIDALI 344


>gi|313158318|gb|EFR57720.1| peptide chain release factor 1 [Alistipes sp. HGB5]
          Length = 361

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 139/238 (58%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A +E+  G GG E+  +A  LLRMYT++ E + ++ E     DG   G K   L +
Sbjct: 111 DSKNAIMEIRGGTGGDEAAIFAGDLLRMYTKYIESKGWRYEMTSFSDGAAGGYKEVVLKV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  ++EIS +D R D 
Sbjct: 171 TGQNVYGTLKYESGVHRVQRVPQTETQGRVHTSAASVAVLPEAEE-FDVEISMNDIRKDI 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ASG GGQ VNTT SA+R+THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K 
Sbjct: 230 FCASGPGGQSVNTTYSAIRLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKY 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             +  I    KT +  G    +IR+Y   P   + D R N    + S  +DGD+ D +
Sbjct: 290 --LDEIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDVI 344


>gi|281208935|gb|EFA83110.1| peptide chain release factor 1 [Polysphondylium pallidum PN500]
          Length = 463

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 179/308 (58%), Gaps = 23/308 (7%)

Query: 49  RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
           RQ++ N I  IKE++       ++L++  EE    ++ E    +      +E     SLL
Sbjct: 152 RQYV-NEIGNIKELK-------MMLDMEKEEASREMIIEDLKAMGEQLAALEKSLIYSLL 203

Query: 109 SGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
             + D + +A +E+ AG GG E+Q +A+ + RMY  +A  + ++ E+L+I   +  G + 
Sbjct: 204 PADKDDDGNAIIEIRAGTGGGEAQLFAHEMFRMYEGYAATKGWRFESLDISYTDVGGCRE 263

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           A+  I G   +G+LK E GVHR+ RI   ++  R HTS +++ + P   + ++I+I++ D
Sbjct: 264 ASAAISGKGVFGFLKNESGVHRVQRIPDTETQGRIHTSTTTVAIMPEPKE-VDIKINDRD 322

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            +ID +R+SG GGQ VNTTDSAVRI H+PTG+ V  Q ERSQ +NK++A  +LRA+LYE+
Sbjct: 323 LKIDVFRSSGNGGQSVNTTDSAVRIVHLPTGITVSMQDERSQLQNKSKAMKVLRARLYEM 382

Query: 288 E---LQKR---EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           E   LQ     E  + IG ++++E     +IR+Y   P   V D R NI       ++ G
Sbjct: 383 ERVRLQTERSAERNSQIGGATRSE-----RIRTYNF-PQDRVTDHRVNITTNDIDAIMTG 436

Query: 342 D-LDDFMK 348
           + L DF++
Sbjct: 437 ETLGDFIE 444


>gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|81749553|sp|Q8FQ31|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens
           YS-314]
 gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
          Length = 358

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 152/251 (60%), Gaps = 7/251 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D +D  +E+ AGAGG E+  +A  LLRMY ++A+K  F  E L+  + +  G+K  TL
Sbjct: 101 EHDGDDIVMEIKAGAGGEEAALFAGDLLRMYQKYADKHGFIIEVLDSAESDLGGVKDITL 160

Query: 171 LIKG--PN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
            I+   P+   A+   K E GVHR+ R+   +S  R  TS + + VYP  D+  ++EI E
Sbjct: 161 SIRSRQPSRDGAWSQFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDE 220

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +N+A+A  +L A+L 
Sbjct: 221 KEIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLAARLQ 280

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            L+ ++ +  A  G +S+   +    +IR+Y   P   + D R   +  +   VL+G+LD
Sbjct: 281 ALQKEEADAEAAEGRASQIRTMDRSERIRTYNW-PENRISDHRIGFKANNLDAVLNGELD 339

Query: 345 DFMKATLAIKK 355
           D   A  A ++
Sbjct: 340 DLFTALRAAER 350


>gi|298373047|ref|ZP_06983037.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275951|gb|EFI17502.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 360

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/234 (41%), Positives = 133/234 (56%), Gaps = 7/234 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  G GG E+  +A  L +MY R+ E R +KTE     +G   G K     +
Sbjct: 110 DGKNAIVEIRGGTGGDEAAIFAGDLFKMYARYCESRGWKTEVTSFTEGTMGGYKEIIFSV 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   +S  R HTS +++ V P  ++  +IEI ESD R D 
Sbjct: 170 SGDNVYGTLKYESGVHRVQRVPATESQGRVHTSAATVAVLPEAEE-FDIEIKESDIRTDI 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ASG GGQ VNTT SA+R+ HIPTG+ VQCQ E+SQ KNKA+A   LR ++Y +E QK 
Sbjct: 229 FCASGHGGQSVNTTYSAIRLVHIPTGITVQCQDEKSQLKNKAKAMTELRTRIYNIEYQKY 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             I +I    KT +  G    +IR+Y   P   + D R N    +    + GD+
Sbjct: 289 --IDDIASKRKTMVSSGDRSAKIRTYNY-PQGRITDHRINYTAYNLPAFVGGDI 339


>gi|227529623|ref|ZP_03959672.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
 gi|227350413|gb|EEJ40704.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
          Length = 362

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/356 (34%), Positives = 184/356 (51%), Gaps = 24/356 (6%)

Query: 10  LGGLFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDR 65
           +  +FD   AV  R   LN    DP +  +      L +E   L   +   +  K++   
Sbjct: 3   MAEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKKVTQT 62

Query: 66  LCDNLILLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLL--SGEADSNDAY 118
           + D+    EL  E DD  + + T D L     Q+ KLE   K+ E LL      D  +  
Sbjct: 63  ISDDE---ELLRESDDPDLTELTKDELSSAKDQQAKLE---KELEILLIPKDPNDDKNII 116

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+   AGG E+  +A  L  MY  +AE + +K E ++  + E  G K   L+I G   Y
Sbjct: 117 MEIRGAAGGDEASLFAADLYNMYLHYAENQGWKVEVVDKSETEVGGFKEIALMITGDKVY 176

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E G HR+ R+   +S  R HTS +++ V P  +D ++++I   D R+D YR+SGA
Sbjct: 177 SKLKFENGAHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGA 235

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   QK  E +  
Sbjct: 236 GGQHVNKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAY 293

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               K  IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +
Sbjct: 294 DAKRKDAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGDLDEIIEALI 348


>gi|328885059|emb|CCA58298.1| Peptide chain release factor 1 [Streptomyces venezuelae ATCC 10712]
          Length = 358

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +E+
Sbjct: 159 VKTKGGNGATEPGQGVWARLKYEGGVHRVQRVPATESAGRIHTSAAGVLVTPEAEE-VEV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI  +D RID YR+SG GGQ VNTTDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAESKAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDAMIQACV 347


>gi|32491094|ref|NP_871348.1| hypothetical protein WGLp345 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173141|sp|Q8D2K9|RF1_WIGBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25166301|dbj|BAC24491.1| prfA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 364

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 144/239 (60%), Gaps = 6/239 (2%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++E+ +G GG E+  +   L RMY +++E + +KT+ +   + E  G K   + I   
Sbjct: 116 NCFIEIRSGTGGKEASLFVRDLCRMYIKYSEIKNWKTDIINYSNSEHGGYKEVIIKICNK 175

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NAY  LK E G HR+ RI   +S  R HTS  +I V P + D    +I  SD RIDT+R+
Sbjct: 176 NAYNKLKFESGGHRVQRIPETESQGRIHTSTCTIAVMPEMLDFKLPKIKTSDLRIDTFRS 235

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+NTTDSA+RITHIPT +VV+CQ ERSQHKNK++A  +L+++L    L+ +++ 
Sbjct: 236 SGAGGQHINTTDSAIRITHIPTNIVVECQDERSQHKNKSKAMLVLKSRLQANLLKNKKQK 295

Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             I    K+ +G G    +IR+Y   P   + D R N+      +V+DG+L+  +   L
Sbjct: 296 EEI--IRKSLLGSGDRSDRIRTYNF-PQGRITDHRINLTIYKIDEVMDGNLNILINPIL 351


>gi|91974579|ref|YP_567238.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB5]
 gi|119361592|sp|Q13F02|RF1_RHOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91681035|gb|ABE37337.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB5]
          Length = 361

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 167/296 (56%), Gaps = 9/296 (3%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSG 110
           L  A+   +E++D L D   LLE    + +   + E   D L   + E+  +   +LL  
Sbjct: 45  LVEAVKAYREVRDELGDVDALLEDPDTDSEMRAMAEAERDALDAHRAELIQEIRVALLPK 104

Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           +A D  +  LE+ AG GG E+  +A  L RMY ++A  + +  E +   +G   G K   
Sbjct: 105 DAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGSMGGFKEII 164

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V++ ++++I   D +
Sbjct: 165 AEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDVDIKADDLK 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RA GAGGQHVN T+SA+RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E 
Sbjct: 224 IDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAE- 282

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           Q+R + A   E  K ++G G    +IR+Y   P   V D R N+       V+ G+
Sbjct: 283 QQRLDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 336


>gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Nocardia farcinica IFM 10152]
 gi|61214587|sp|Q5Z0Z2|RF1_NOCFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54014529|dbj|BAD55899.1| putative peptide chain release factor 1 [Nocardia farcinica IFM
           10152]
          Length = 356

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/309 (38%), Positives = 172/309 (55%), Gaps = 11/309 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+  DP L  +   A+ + +    L   ++  ++++    D     ELA   DD S  
Sbjct: 17  LETQLADPTLHNDPSAARRVGKRFAELAPIMATYRKLESARADLTAARELAA--DDASFA 74

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E  + L+R   E+E    + L   +  D +D  LEV +G GG ES  +A  L RMY R+
Sbjct: 75  AEVPE-LERQVDELEQALADLLAPRDPHDGDDVVLEVKSGEGGEESALFAADLARMYMRY 133

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLVRISPYDSN 199
           AE+R ++ E L+    +  G K ATL IK  +A     +   K E GVHR+ R+   +S 
Sbjct: 134 AERRGWRVEVLDATVSDLGGYKEATLSIKSRDAARDGVWSRFKFEGGVHRVQRVPVTESQ 193

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS + + +YP  D+  E++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+
Sbjct: 194 GRIHTSAAGVLIYPEPDEVAEVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 253

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318
           VV CQ ERSQ +NKA+A  +L A+L  L  ++ E+ A  G +S+   +    +IR+Y   
Sbjct: 254 VVTCQNERSQLQNKARAMQVLAARLQALAEEQAEQEAAAGRASQIRTVDRSERIRTYNF- 312

Query: 319 PYQMVKDLR 327
           P   + D R
Sbjct: 313 PENRITDHR 321


>gi|227548000|ref|ZP_03978049.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079906|gb|EEI17869.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 357

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 147/245 (60%), Gaps = 7/245 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D +D  +E+ AGAGG E+  +A  L RMY ++ EK     E L++ + +  G K  T+
Sbjct: 101 EHDGDDIIMEIKAGAGGEEAALFAGDLARMYQKYCEKNGLSWEVLDLAESDLGGAKDMTV 160

Query: 171 LIKGP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
            +K        A+  LK E GVHR+ R+   +S  R  TS + ++V+P  ++   ++I E
Sbjct: 161 AVKSKTPSRDGAWSKLKFEGGVHRVQRVPVTESQGRIQTSAAGVYVFPEAEEVASVDIDE 220

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RID YR+SG GGQ VNTTDSAVRITH+PT +VV CQ ERSQ +N+A+A  +L+A+L 
Sbjct: 221 KDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQNERSQIQNRARAMQVLQARLD 280

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +LE +K +  A  G +S+   +    +IR+Y   P   + D R N +  +   VLDG++D
Sbjct: 281 QLEREKADAEAAEGRASQVRTMDRSERIRTYNW-PENRISDHRINYKANNLDSVLDGNMD 339

Query: 345 DFMKA 349
           + + A
Sbjct: 340 ELISA 344


>gi|114052078|ref|NP_001039843.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
 gi|122135943|sp|Q2KI15|RF1ML_BOVIN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|86826548|gb|AAI12807.1| Mitochondrial translational release factor 1-like [Bos taurus]
          Length = 380

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK  A   LRAKLY L+
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQ 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE +    + K +IG  GR  +IR+Y   P   V D R N
Sbjct: 300 LE--EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRIN 340


>gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
 gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
          Length = 362

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 158/285 (55%), Gaps = 11/285 (3%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           E+  E DD  +   T D L   K   E   K+ E LL      D  +  +E+   AGG E
Sbjct: 68  EMLRETDDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGDE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L  MY  +AEK+ +K E ++  + E  G K   L+I G N Y  LK E G HR
Sbjct: 128 ASLFAADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKFENGAHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P  +D ++++I   D R+D YR+SGAGGQHVN T SA
Sbjct: 188 VQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   QK +   +  +  K  IG G
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQNAYD--KKRKNAIGTG 304

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R  +       ++ G+LD+ ++A +
Sbjct: 305 DRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGELDEIIEALI 348


>gi|296483896|gb|DAA26011.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
          Length = 380

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK  A   LRAKLY L+
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQ 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE +    + K +IG  GR  +IR+Y   P   V D R N
Sbjct: 300 LE--EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRIN 340


>gi|301165960|emb|CBW25534.1| peptide chain release factor 1 [Bacteriovorax marinus SJ]
          Length = 357

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 190/351 (54%), Gaps = 19/351 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD  D  ++R   L  K  DP ++    E K +  ER +L+  +   KE   +++ + +
Sbjct: 3   MFDKLDAVIERFETLTEKLADPTIYDRQDEFKKISSERSNLEEVVVAYKEYRQMKEDIDE 62

Query: 69  NLILLELALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126
              +L+   +ED   + +E  ++N  +I  E+E +    LL  +  D  +  +E+ AGAG
Sbjct: 63  AKEILKNEKDEDMKEMAKEVIAENEPQIP-EMEERLTILLLPKDPLDDKNVMMEIRAGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   + RMY+ +     FK E + I +G+E GIK     + G   Y  LK E G
Sbjct: 122 GDEASIFVGDVYRMYSNYFRDLGFKVEQVSISEGDE-GIKEIIFSVSGEKVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P  DD +E ++  +D RID YR+ GAGGQ VNTT
Sbjct: 181 VHRVQRVPKTESQGRVHTSTITVAVMPETDD-VEFDLDMNDVRIDVYRSGGAGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KT 304
           DSAVR+THIPTG VV  Q ++SQ KNK +A  +L+ ++Y+  LQ++    N  E++  K 
Sbjct: 240 DSAVRVTHIPTGTVVANQDQKSQLKNKEKALRILKNRIYDKMLQEK----NAAEAAERKG 295

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +G G    +IR+Y   P   + D R  +   S   +++GD+     A +A
Sbjct: 296 LVGTGDRSERIRTYNF-PQGRLTDHRIGLTLYSLDKIIEGDMTPVTDALIA 345


>gi|296268873|ref|YP_003651505.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
 gi|296091660|gb|ADG87612.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
          Length = 350

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/348 (36%), Positives = 181/348 (52%), Gaps = 22/348 (6%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  V+  + L  K  DP +  +  +A+   +    L   I+  +E+Q    D     
Sbjct: 1   MNLDELVKEYADLEQKLADPAVHADQAKARKYGKRYAELTPIITTYRELQSVREDLEAAR 60

Query: 74  ELALEEDDCSI--------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           ELA E+   +         + E  D L+R+ +  +            D  D  +E+ AG 
Sbjct: 61  ELAREDPAFAEEAAELEAKIPELEDRLKRLLIPKDPN----------DGKDIIMEIKAGE 110

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-NAYGWLKGE 184
           GG ES  +A  LLRMY R+AE+  +K E +     E  G K  T+ IKG   A+  LK E
Sbjct: 111 GGEESALFAADLLRMYLRYAERLGYKAEIISAQPSELGGYKDVTISIKGKEGAWSRLKYE 170

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + VYP  ++ I+++I  +D RID +R+SG GGQ VN
Sbjct: 171 GGVHRVQRVPVTESQGRIHTSAAGVLVYPEAEE-IDVQIDPNDLRIDVFRSSGPGGQSVN 229

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITHIPTGVVV CQ E+SQ +NK  A  +LRA+L  L  Q+ E  A     S+ 
Sbjct: 230 TTDSAVRITHIPTGVVVSCQNEKSQLQNKEAAMRILRARLLALAQQEAEAAAAAERRSQV 289

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 290 RTVDRSERIRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDGVIQALI 336


>gi|309775307|ref|ZP_07670316.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916970|gb|EFP62701.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 357

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 144/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS++A +E+   AGG E   +A  L RMY+++AE + +K E +E+ D E  G    + ++
Sbjct: 108 DSHNAIVEIRGAAGGDEGNIFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   YG LK E G HR+ R+   +S  R HTS +++ V P ++ + + +I  +D  ++T
Sbjct: 168 KGDGVYGKLKFESGSHRVQRVPKTESQGRIHTSTATVLVTPEIE-AEDFDIDMNDLEVET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQH+N TDSAVRI H PTG+VV+CQ  RSQH+N+A A   +R+++YE   +K 
Sbjct: 227 MRASGAGGQHINKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKL 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE   +   SK  IG G    +IR+Y   P   V D R          +++G + D + A
Sbjct: 287 EEEQGVERRSK--IGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDA 343

Query: 350 TLA 352
            L+
Sbjct: 344 LLS 346


>gi|170742857|ref|YP_001771512.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
 gi|226739116|sp|B0UAV4|RF1_METS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168197131|gb|ACA19078.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
          Length = 359

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 146/242 (60%), Gaps = 8/242 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +A  LLRMY R+A+ + +K E +    G   G +     
Sbjct: 106 ADEKSAILEIRAGTGGDEAALFAGDLLRMYARYADLKGWKIEVVSESPGTMGGYREVVAE 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG   +  LK E G HR+ R+   ++  R HTS +++ V P  ++ ++I ++E+D +ID
Sbjct: 166 VKGRGVFARLKFESGAHRVQRVPETETQGRIHTSAATVAVLPEAEE-VDIHVNEADLKID 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+RITHIP+G+VV  Q+ERSQHKN+A+A  +LRA+LYE E  +
Sbjct: 225 TMRAQGAGGQHVNKTESAIRITHIPSGIVVFVQEERSQHKNRARAMAVLRARLYEQE--R 282

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
            ++ A      + ++G G    +IR+Y   P   V D R N+      +VL G  LD+ +
Sbjct: 283 SQKDAARAADRRAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELV 341

Query: 348 KA 349
            A
Sbjct: 342 DA 343


>gi|148258772|ref|YP_001243357.1| peptide chain release factor 1 [Bradyrhizobium sp. BTAi1]
 gi|146410945|gb|ABQ39451.1| bacterial peptide chain release factor 1 (bRF-1) [Bradyrhizobium
           sp. BTAi1]
          Length = 361

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 148/249 (59%), Gaps = 8/249 (3%)

Query: 98  EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           E+E K   +LL  +A D  +  LE+ AG GG E+  +A  L RMY R+A  + +K E + 
Sbjct: 92  ELEQKIRVALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVIS 151

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             +G   G K     ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V P V+
Sbjct: 152 ASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVE 211

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + ++++I + D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV  Q  RSQHKN+A A
Sbjct: 212 E-VDVDIKQDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASA 270

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
            N+LR+++Y+ E QK +  A      K ++G G    +IR+Y   P   V D R N+   
Sbjct: 271 MNILRSRIYDAERQKVD--AARSAERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 327

Query: 334 SPSDVLDGD 342
               V+ G+
Sbjct: 328 KLPQVIAGE 336


>gi|297157199|gb|ADI06911.1| peptide chain release factor 1 [Streptomyces bingchenggensis BCW-1]
          Length = 356

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/248 (41%), Positives = 148/248 (59%), Gaps = 10/248 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LEV AG GG ES  +A  LLRMY R+AE+  +KTE ++ ++ +  G K   + 
Sbjct: 99  SDDKDVILEVKAGEGGEESALFAGDLLRMYLRYAERVGWKTEIIDANESDLGGYKDVQVA 158

Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +E+EIS
Sbjct: 159 VKAKSNAEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEVEIS 217

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ++D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK QA  +LR++L
Sbjct: 218 QNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRL 277

Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
                ++ E  A+    S+   +    +IR+Y   P   + D R   +  +   VLDG+L
Sbjct: 278 LAAAQEEAEREASDARRSQVRTVDRSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGEL 336

Query: 344 DDFMKATL 351
           D  ++A +
Sbjct: 337 DPVIQACV 344


>gi|212550858|ref|YP_002309175.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549096|dbj|BAG83764.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 359

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/284 (36%), Positives = 157/284 (55%), Gaps = 20/284 (7%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLS-------------GEADSNDAYLEVHAGAG 126
           D  +IL++ SD + R   + E ++  SLL+                D  +A +E+ +G G
Sbjct: 63  DAQTILEKESDKILREIAKEELEESTSLLNQLEKKIKLLLIPIDPQDGKNAIVEIRSGTG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L +MY+++ E + +K       +G   G K     + G N Y  LK E G
Sbjct: 123 GDEASLFAGDLYKMYSKYCESKGWKIAVTSSSEGTIGGFKEIIFTVNGENVYSTLKYESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V+P   D ++IEI ESD R DT+ +SG GGQ VNTT
Sbjct: 183 VHRVQRVPITETQGRIHTSAATVAVFPEAKD-VDIEIKESDIRTDTFCSSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SA+R+THIPTG+VVQCQ ERSQ KNK +A   LR+++Y +E QK  +I       KT +
Sbjct: 242 YSAIRLTHIPTGIVVQCQDERSQLKNKEKAMTELRSRIYNIEYQK--QIDETALKRKTMV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             G    +IR+Y   P   V D R N    +    L+G++ +F+
Sbjct: 300 STGDRSAKIRTYNY-PQGRVTDHRINYTTYNLLTFLEGNIQEFI 342


>gi|329929018|ref|ZP_08282820.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
 gi|328937007|gb|EGG33436.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
          Length = 355

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 149/244 (61%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I
Sbjct: 106 DDKNVIIEIRGAAGGDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ RI   +S  R HTS S++ V P  ++ ++IEI + D R+DT
Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVAVMPEAEE-VDIEIHDKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA+++  ++ ++
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIF--DMMRQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A      K+++G G    +IR+Y   P   V D R  +       V++G++++ + A
Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSA 341

Query: 350 -TLA 352
            TLA
Sbjct: 342 LTLA 345


>gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
 gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
          Length = 356

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 182/343 (53%), Gaps = 13/343 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +   + L T+  DP +  +   A+ L +    L       +E    + D++   E  
Sbjct: 6   DDLLAEYAELGTRLADPSVHADADVARKLGKRYAELGPIAETYREYTS-VSDDITAAEEL 64

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
             ED      E    LQ  +  +E +  + L+  +  D  +  LE+  G GG ES  +A 
Sbjct: 65  SAEDPA--FGEEIPGLQERRTALEERLQKLLIPRDPMDEKNVILEIKGGEGGQESMLFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHR 189
            LLRMY R+AE++ +KTE LE  + +  G K   + +KG         +  LK E GVHR
Sbjct: 123 DLLRMYMRFAERQHWKTEILESTESDLGGYKDVQVAVKGRVNEAGEGVWARLKYEGGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V P  +D +E+EI+ +D RID +R+SG GGQ VNTTDSA
Sbjct: 183 VQRVPVTESQGRIHTSAAGVLVLPEAED-VEVEINANDLRIDVFRSSGPGGQSVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           VRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L  +  ++ + E ++  +S    +  
Sbjct: 242 VRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAVAQEEADREASDTRKSQIRTMDR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 SERIRTYNF-PENRISDHRVGYKSYNLDQVLDGDLDAVIQACV 343


>gi|94676864|ref|YP_588739.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|119361509|sp|Q1LTH5|RF1_BAUCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94220014|gb|ABF14173.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 366

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 143/243 (58%), Gaps = 5/243 (2%)

Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           D ND    ++EV AG GG E+  +A  L RMY+R+AE   ++ + +    G   G K   
Sbjct: 108 DPNDERGCFIEVRAGTGGDEAALFAGDLFRMYSRYAEIHSWQIDVISASSGPHGGYKEII 167

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + +   NAYG LK E G HR+ RI   +S  R HTS  ++ V P +  +   EIS  D R
Sbjct: 168 VKMSHDNAYGQLKFESGGHRVQRIPETESQGRIHTSSCTVAVIPDILHAELPEISPEDIR 227

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +DT+R+SGAGGQHVNTT+SA+RITH+PTG+VV+CQ ERSQHKNKA+A  +L A+L   E 
Sbjct: 228 VDTFRSSGAGGQHVNTTESAIRITHLPTGLVVECQDERSQHKNKAKAMAVLSARLRAAEA 287

Query: 290 QKREEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           Q R++  +    +    G+   +IR+Y   P   + D R        ++V++G L+  ++
Sbjct: 288 QCRQQEESCMRRNLLGSGYRSDRIRTYNF-PQGRITDHRIGFTTYRLNEVIEGKLEILLQ 346

Query: 349 ATL 351
             +
Sbjct: 347 PII 349


>gi|78778239|ref|YP_394554.1| peptide chain release factor 1 [Sulfurimonas denitrificans DSM
           1251]
 gi|119361635|sp|Q30NW2|RF1_SULDN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78498779|gb|ABB45319.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 355

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/344 (35%), Positives = 181/344 (52%), Gaps = 36/344 (10%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQD--RLCDNL 70
           + R + L      P +  ++     L +ER  L+  +       S I +I D   +  + 
Sbjct: 10  INRYNELGEMLSSPDITSDIKRMTTLSKERSSLEKIVEKAQEYKSVISQINDTKEMLYDA 69

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSND---AYLEVHAG 124
            + E+A EE     L+E         LE++    E+   LL    D ND     +E+ AG
Sbjct: 70  EMAEMAKEE-----LKE---------LEIQIPILENDIKLLLLPKDPNDDRNIIVELRAG 115

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +   L   YTR+A+ + +K E L     +  G K    LI+G   Y  LK E
Sbjct: 116 AGGDEAAIFVGNLFEAYTRYADLKDWKVEILSSSPSDAGGYKEIIALIRGEQVYSRLKYE 175

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS  ++ V P VDD +EI+I+E+D +ID  R+SG GGQ VN
Sbjct: 176 GGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEIQINENDLKIDVMRSSGCGGQSVN 234

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+VV  Q ++SQHKNK +A  +L+A+LY+LE+Q  E IA    +   
Sbjct: 235 TTDSAVRITHLPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQ--EAIAKDSANRSA 292

Query: 305 EIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ++G G    +IR+Y   P   + D R  +     ++++ G L D
Sbjct: 293 QVGTGDRSGRIRTYNY-PQNRMSDHRITLTLYRLAEIMQGGLMD 335


>gi|326790732|ref|YP_004308553.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
 gi|326541496|gb|ADZ83355.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
          Length = 357

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/271 (39%), Positives = 157/271 (57%), Gaps = 15/271 (5%)

Query: 84  ILQETSDNLQRIK-LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLR 139
           + +E ++N +R++ LE E K    LL    D ND     +E+  GAGG E+  +A  L R
Sbjct: 77  VKEELAENKKRVEPLENEIK----LLLLPKDPNDDKNVIMEIRGGAGGDEAALFAAELYR 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY  +AE  ++KTE + +++    G K    ++KG  AY  LK E GVHR+ RI   +S 
Sbjct: 133 MYCYYAESHRWKTELMSLNENGIGGFKEVIFMVKGQGAYSKLKYESGVHRVQRIPATESG 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P  ++ +++++  +D RID  RASG GGQ VNTTDSAVR  H+PTG+
Sbjct: 193 GRIHTSTVTVAVMPEAEE-LDVQLDMNDVRIDVCRASGNGGQCVNTTDSAVRALHVPTGL 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           +V CQ E+SQ KNK +A  +LR +L++LE  K    A +    K+ +G G    +IR+Y 
Sbjct: 252 MVYCQDEKSQLKNKEKALKILRTRLFDLEQAKAH--AEMAAEKKSLVGTGDRSERIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             P   V D R  +       VLDGDL++ +
Sbjct: 310 F-PQGRVTDHRVGLTLHKLEQVLDGDLEEII 339


>gi|261409698|ref|YP_003245939.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
 gi|261286161|gb|ACX68132.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
          Length = 355

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 149/244 (61%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I
Sbjct: 106 DDKNVIIEIRGAAGGDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ RI   +S  R HTS S++ V P  ++ ++IEI + D R+DT
Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVAVMPEAEE-VDIEIHDKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA+++  ++ ++
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIF--DMMRQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A      K+++G G    +IR+Y   P   V D R  +       V++G++++ + A
Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSA 341

Query: 350 -TLA 352
            TLA
Sbjct: 342 LTLA 345


>gi|28378950|ref|NP_785842.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|32171522|sp|Q88UT2|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28271787|emb|CAD64693.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 360

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 173/296 (58%), Gaps = 12/296 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--- 116
           KE+  ++ +N  LL   L+++  +++++   NL   K ++E++   +LL    D ND   
Sbjct: 55  KEVTSQIEENDELLHEKLDDEMNAMVKDDLKNLNAEKDQLEHEI--TLLMLPKDPNDDKN 112

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+H  AGG E+  +A  L  MY+++AE++ ++ E  + ++ E  G K   L+I G  
Sbjct: 113 IIMEIHGAAGGDEASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDK 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            Y  LK E G HR+ R+   +S  R HTS +++ V P   D ++I+I + D R D +R+S
Sbjct: 173 VYSKLKYESGAHRVQRVPVTESAGRVHTSTATVGVMPEAQD-VDIDIDQKDIRTDVFRSS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +LRA++Y+   Q RE+  
Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDY-YQSREQNE 290

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              E  K+ +G G    +IR+Y   P   V D R  +       V++G+LD+ + A
Sbjct: 291 YDAE-RKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDEVIDA 344


>gi|196229467|ref|ZP_03128332.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
 gi|196226699|gb|EDY21204.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
          Length = 360

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 143/248 (57%), Gaps = 7/248 (2%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           QF  L     +  DA +E+  G GG E+  +A  L RMYTR+AE   FK E LE   GE 
Sbjct: 97  QFALLPPDPNEDRDAIVEIRGGTGGDEAALFAADLYRMYTRFAETHGFKLEPLEASVGEL 156

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K     + G   +  L+ E GVHR+ R+   ++  R HTS +++ V P  ++ +++E
Sbjct: 157 GGMKEVIFKVTGDQVFRTLRYESGVHRVQRVPATEAQGRIHTSTATVAVLPEAEE-VDLE 215

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +   + RI+  RA G GGQ VNTTDSAV++ HIPTG +V+CQ  RSQ KNK +A  +LR+
Sbjct: 216 LKADEIRIEVCRAGGPGGQGVNTTDSAVQVMHIPTGTIVRCQDGRSQQKNKEKALTILRS 275

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +L  LE+++REE        K +IG G    +IR+Y   P   V D R N+   +    +
Sbjct: 276 RL--LEVKQREEAEKYAAQRKGQIGTGDRSEKIRTYNF-PQNRVTDHRINLTLYNLDSFI 332

Query: 340 DGDLDDFM 347
           +G++D+ +
Sbjct: 333 EGNIDEMI 340


>gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 357

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 146/245 (59%), Gaps = 4/245 (1%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGI 165
           L   EADS +  +E+ AG GG E+  +A  +LRMY R+AEK+ +K E L  ++     G 
Sbjct: 100 LPKDEADSRNVIVEIRAGTGGEEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGF 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +  TL + G + YG +K E GVHR+ R+   ++  R HTS  S+ V P  ++ +++EI  
Sbjct: 160 REITLEVSGHDVYGTMKYESGVHRVQRVPDTETQGRIHTSAVSVAVLPEAEE-VDVEIRR 218

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R DTYR+ G GGQ+VN  ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLR KLY
Sbjct: 219 EDLRFDTYRSGGKGGQNVNKVETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLY 278

Query: 286 ELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++ L ++ ++ A++  S  T      +IR+Y   P   V D R      +   +L G++ 
Sbjct: 279 DILLAEQVQQRADLRRSMVTTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQILQGEIQ 337

Query: 345 DFMKA 349
           D + A
Sbjct: 338 DIIDA 342


>gi|283768251|ref|ZP_06341164.1| peptide chain release factor 1 [Bulleidia extructa W1219]
 gi|283105128|gb|EFC06499.1| peptide chain release factor 1 [Bulleidia extructa W1219]
          Length = 358

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 142/243 (58%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+  GAGG E   +A  L RMYTR+AE + +K + +E    E  G       I
Sbjct: 108 DDHDVIMEIRGGAGGDEGNIFAGDLYRMYTRYAESKGWKVQVMETSISEAGGFSQVIFSI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E GVHR+ R+   +S  R HTS +++   P  +++ +IEI  +D  I+T
Sbjct: 168 KGNEVYRDLKWESGVHRVQRVPKTESQGRVHTSTATVLCQPEAEEA-DIEIDPADLTIET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRI H+PTG+ V CQ+ RSQ +N+  A  ++RA++YE   ++R
Sbjct: 227 HRASGAGGQHINKTDSAVRIVHVPTGITVNCQEGRSQIENRETAMRLIRARVYEEIKRQR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E A  G + + +IG G    +IR+Y   P   V D R  +  T    +++G LD  +  
Sbjct: 287 DEEA--GAARRAKIGTGDRSEKIRTYNY-PQNRVTDHRIGLTITQLDRIMEGKLDGIIAG 343

Query: 350 TLA 352
             A
Sbjct: 344 LQA 346


>gi|300025029|ref|YP_003757640.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526850|gb|ADJ25319.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 359

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 11/245 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LEV AG GG E+  +A  L RMY+R+A+ R +K E +   + +  G K     
Sbjct: 107 ADEKSAILEVRAGTGGDEAALFAADLFRMYSRYADLRGWKVEVISASENDLGGYKEIVAS 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   +++ R HTS +++ V P  +D +EI+I   D RID
Sbjct: 167 ITGEGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAED-VEIDIKPDDIRID 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SAVRITH+PTG+VV    E+SQH+N+  A N+L+A++YELE   
Sbjct: 226 TMRAGGAGGQHVNKTESAVRITHLPTGIVV-VSAEKSQHQNRRLAMNVLKARVYELE--- 281

Query: 292 REEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346
           RE+ A    ++ K+++G G   ++IR+Y   P   V D R N+   +  +V+ G+ LD  
Sbjct: 282 REKAATERSDARKSQVGSGDRSQRIRTYNF-PQGRVTDHRINLTLYNLDEVMVGNGLDAL 340

Query: 347 MKATL 351
           + A +
Sbjct: 341 VDALI 345


>gi|320528629|ref|ZP_08029782.1| peptide chain release factor 1 [Solobacterium moorei F0204]
 gi|320130995|gb|EFW23572.1| peptide chain release factor 1 [Solobacterium moorei F0204]
          Length = 358

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 144/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+  GAGG E   +A  L RMY+++AE + +K + LE    E  G       +
Sbjct: 108 DDHDVIMEIRGGAGGDEGNIFAGDLYRMYSKYAESKGWKVQVLEASVSEAGGYTQIIFSV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + Y  LK E GVHR+ R+   ++  R HTS +++   P  +D+ +IEI   D  I+T
Sbjct: 168 KGTDVYKELKFESGVHRVQRVPKTETQGRIHTSTATVLCQPEAEDT-DIEIDPKDLTIET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQH+N TDSAVRI H+PTG+ V CQ  RSQ +N+  A  ++RA++YE EL++ 
Sbjct: 227 HRASGAGGQHINKTDSAVRIVHVPTGITVNCQDGRSQIENRETAMRLIRARVYE-ELKRI 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E    G+  + +IG G    +IR+Y   P   V D R ++  T    +++G LD  ++ 
Sbjct: 286 QE-EEAGKIRRAKIGTGDRSEKIRTYNY-PQNRVTDHRISLTITQLDRIMEGKLDGVIEG 343

Query: 350 TLA 352
            LA
Sbjct: 344 LLA 346


>gi|89897680|ref|YP_521167.1| peptide chain release factor 1 [Desulfitobacterium hafniense Y51]
 gi|89337128|dbj|BAE86723.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 360

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 145/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMYT++AE++ ++TE L     +  G K    LI
Sbjct: 111 DDKNVIMEIRAGAGGEEAALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLI 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++ I+ +D RID 
Sbjct: 171 EGQGAYSKLKFESGVHRVQRVPTTESGGRIHTSTTTVAVLPEAEE-VDVAINPNDLRIDI 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + 
Sbjct: 230 FCSSGPGGQSVNTTQSAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQE 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E +  +    ++++G G    +IR+Y   P   V D R  +       +L G+LD+ + A
Sbjct: 288 EAMGELASERRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINA 346

Query: 350 TL 351
            +
Sbjct: 347 LI 348


>gi|284046083|ref|YP_003396423.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
 gi|283950304|gb|ADB53048.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
          Length = 349

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 176/333 (52%), Gaps = 16/333 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-- 79
           R   L  +  DP +  +        R+ + L+ A     E +  + D     EL LEE  
Sbjct: 12  RFQELEAQMSDPEVIGDRQRYAETGRQYRDLEEAARLAAEWRRAVDDEAGAREL-LEEGG 70

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           DD  +    +   +RI    E  +   +    AD  +  +E+  GAGG E+  +A  L R
Sbjct: 71  DDAEVRDMLARARERIDALDEEIRLAMVEKDPADEKNVIVEIRPGAGGDEAGLFAGDLYR 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           M TR+AE+R FKTEAL   DG+       T  +KG  AY   K E G HR+ R+   +S 
Sbjct: 131 MLTRYAERRGFKTEALSESDGQ------YTFAVKGEGAYSVFKFEGGTHRVQRVPETESQ 184

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P  ++ +++E++++D ++D YR+SG GGQ VNTTDSAVRITH P+G+
Sbjct: 185 GRIHTSTATVAVLPEAEE-VDVEVNDNDLQVDVYRSSGPGGQSVNTTDSAVRITHKPSGI 243

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV  Q E+SQ +N+ +A  +LRA+LYE  L   E+ A +  +   ++G G    +IR+Y 
Sbjct: 244 VVSMQDEKSQLQNRDKAMRVLRARLYEAALA--EQQAELSATRLAQVGSGERAEKIRTYN 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             P   + D R  +   +    L G+LDD   A
Sbjct: 302 F-PQGRITDHRIKLTVHNLDAALAGELDDVTDA 333


>gi|302811530|ref|XP_002987454.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
 gi|300144860|gb|EFJ11541.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
          Length = 505

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 176/313 (56%), Gaps = 27/313 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQ 103
           + +E ++LD ++  IK ++ +  + + L EL  E  +D  + +  S  LQ    EV   Q
Sbjct: 27  MNKELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQ 86

Query: 104 FESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
            + LL      EADS         GAGG E+  +A+ L +MY ++A    ++ E L I  
Sbjct: 87  HDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYEKYAANNSWRFEVLSITT 138

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            +    K A+  I G   YG LK E GVHR+ R+   +   R HTS +S+ + P  ++ I
Sbjct: 139 TDTRCYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-I 197

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQHKNKA+A ++
Sbjct: 198 DVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSI 257

Query: 280 LRAKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           L A+LYELE  +    R E+    IG S ++E     +IR+Y   P   V D R  + + 
Sbjct: 258 LYARLYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDRRVGVTQH 311

Query: 334 SPSDVLDG-DLDD 345
           +   +++G D+D+
Sbjct: 312 AIEQIMEGIDVDN 324


>gi|311243768|ref|XP_003121185.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Sus scrofa]
          Length = 380

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S EAD ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY L 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLH 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE +    + K ++G  GR  +IR+Y   P   V D R N
Sbjct: 300 LE--EETSKRYNARKVQVGTKGRSEKIRTYNF-PQNRVTDHRIN 340


>gi|297192053|ref|ZP_06909451.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719497|gb|EDY63405.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 359

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/251 (41%), Positives = 144/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LEV AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEVKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ I++
Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI  +D RID YR+SG GGQ VNTTDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAESKAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDAVIQACV 347


>gi|110640072|ref|YP_680282.1| peptide chain release factor 1 [Cytophaga hutchinsonii ATCC 33406]
 gi|119361529|sp|Q11NS4|RF1_CYTH3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110282753|gb|ABG60939.1| bacterial peptide chain release factor 1 (bRF-1) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 359

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 184/324 (56%), Gaps = 11/324 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALEEDDCSILQET 88
           DP++  ++     L +E + L+  +      K I D +  +  +L +  + D   + +E 
Sbjct: 21  DPNIMSDMKRYASLNKEYKELNKIVEVYAQYKNILDNIESSKKVLSVEKDPDFREMAKEE 80

Query: 89  SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            + L   K ++E    E L+  +  DS +  LE+  G GG E+  +A  + RMY R+ ++
Sbjct: 81  LETLAVQKDDIELVIKELLIPKDPNDSKNIILEIRGGTGGDEASIFAGDIFRMYQRYCDR 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             +K E ++  +G   G K     I G + YG LK E GVHR+ R+   ++  R HTS +
Sbjct: 141 MGWKMELIDATEGTSGGYKEIICGISGEDVYGKLKFESGVHRVQRVPATETQGRIHTSAA 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P V++ ++++++ +D R DT+ +SG GGQ VNTT SA+R+THIP+G VVQCQ E+
Sbjct: 201 SVAVLPEVEE-LDVQLNMNDIRKDTFCSSGPGGQSVNTTYSAIRLTHIPSGTVVQCQDEK 259

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQ KN  +A  +LR+++YE+E +K+++   +G+   + IG G    +IR+Y   P   V 
Sbjct: 260 SQIKNFEKALKVLRSRIYEIEYKKQQD--ELGKERNSMIGSGDRSDKIRTYNY-PQSRVT 316

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMK 348
           D R      +   V+DG++DDF++
Sbjct: 317 DHRIGHTVHNLPAVMDGNIDDFIE 340


>gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
 gi|167667899|gb|EDS12029.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
          Length = 358

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 7/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +A +L RMYT +AE   ++ E +  ++ E  G K     I
Sbjct: 107 DDKNVIVEIRGGAGGEEAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   ++  R HTS  ++ V P  ++ +E E+   D +ID 
Sbjct: 167 TGEGAYSRLKYESGVHRVQRVPETETQGRIHTSTVTVAVLPEAEE-VEFELDPRDLQIDV 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T SA+R+TH+PTG+VV+CQ ERSQ+KNK +A  +LRA+L  L+++ R
Sbjct: 226 FRSSGAGGQHVNKTSSAIRVTHLPTGMVVECQDERSQYKNKDRALKVLRARL--LDIKVR 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   I    + ++G G    +IR+Y   P   V D R  +       VL+GDL +   A
Sbjct: 284 EQNDKIATERRLQVGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSVLNGDLAELFDA 342

Query: 350 TLAI 353
            +  
Sbjct: 343 LMTF 346


>gi|193216649|ref|YP_001999891.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
 gi|226739117|sp|B3PMD5|RF1_MYCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193001972|gb|ACF07187.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
          Length = 355

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 145/252 (57%), Gaps = 16/252 (6%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D+ +  +E+   AGG E   ++  L +MY ++ E   FK + ++   G   G      
Sbjct: 104 ENDNKNVIMEIRGAAGGDEGDIFSGDLFKMYQKFCEANDFKIKIVDSVYGTAGGYSRIVF 163

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           ++KG   +  LK E+GVHR+ R+   ++  R HTS +++ V P VDD ++IEI   D  +
Sbjct: 164 IVKGEKVFSKLKFERGVHRVQRVPQTETQGRVHTSTATVTVLPEVDDDVKIEIRPEDIEV 223

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +R+SGAGGQ VNTTDSAVRITH  TG++V  Q ERSQ  N+  A  +L+AKLYE+E++
Sbjct: 224 DVFRSSGAGGQSVNTTDSAVRITHKKTGIIVTSQDERSQIMNRETALKILKAKLYEIEVK 283

Query: 291 KREE-------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           KREE       +A  G+ S+       +IR+Y   P   + D R      S  +V++G+L
Sbjct: 284 KREEEEQGLRKLAGTGDRSE-------KIRTYNY-PQDRITDHRIGF-SLSLKNVMEGNL 334

Query: 344 DDFMKATLAIKK 355
           D  + A +A +K
Sbjct: 335 DKIIDALIADEK 346


>gi|312869581|ref|ZP_07729732.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
 gi|311094867|gb|EFQ53160.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
          Length = 362

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/285 (37%), Positives = 159/285 (55%), Gaps = 11/285 (3%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           E+  E +D  +   T D L   K   E   K+ E LL      D  +  +E+   AGG E
Sbjct: 68  EMLRETNDPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGDE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L  MY  +AEK+ +K E ++ ++ E  G K   L+I G N Y  LK E G HR
Sbjct: 128 ASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKFENGAHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P  +D ++++I   D R+D YR+SGAGGQHVN T SA
Sbjct: 188 VQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   QK  E +   E  K  IG G
Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAYDEQRKNAIGTG 304

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R  +       ++ G+LD+ ++A +
Sbjct: 305 DRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGELDEIIEALI 348


>gi|75674575|ref|YP_316996.1| peptide chain release factor 1 [Nitrobacter winogradskyi Nb-255]
 gi|119361570|sp|Q3SVP7|RF1_NITWN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74419445|gb|ABA03644.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           winogradskyi Nb-255]
          Length = 358

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 157/274 (57%), Gaps = 21/274 (7%)

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
           A+ E +   L+  +D L Q+I++        +LL  +A D  +  LEV AG GG E+  +
Sbjct: 75  AMAEAERPALEARNDELMQKIRV--------ALLPKDAMDERNVMLEVRAGTGGDEASLF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+A  + +K E +   +G   G K     ++G  AY  +K E GVHR+ R+
Sbjct: 127 AGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQVQGRGAYARMKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P  ++ ++++I   D RI+T RA GAGGQHVN T+SA+RIT
Sbjct: 187 PDTEAQGRVHTSAATVAVLPEAEE-VDVDIRPDDLRIETMRAQGAGGQHVNKTESAIRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIGWG-- 309
           HIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+     N   S+  K ++G G  
Sbjct: 246 HIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQR----INAARSADRKDQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             +IR+Y   P   V D R N+       V+ GD
Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGD 334


>gi|320354565|ref|YP_004195904.1| peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123067|gb|ADW18613.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfobulbus
           propionicus DSM 2032]
          Length = 356

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/284 (37%), Positives = 161/284 (56%), Gaps = 17/284 (5%)

Query: 68  DNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           D+  L+ELA  E +  ++++T  +   RI+L         L     D  + +LE+ AG G
Sbjct: 70  DDPDLVELAKAEIEELVVKQTELEQAIRIRL---------LPKDPNDDKNIFLEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L RMY+R+AE + +K E +  +     G K    L+ G   Y  LK E G
Sbjct: 121 GDEAALFVADLFRMYSRYAEMQGWKVEVMSSNPIGIGGFKELIALVSGTQVYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ + P  ++ +++ I  ++ + D YR+SG GGQ VNTT
Sbjct: 181 VHRVQRVPDTETQGRIHTSAVTVAIIPEAEE-VDLHIEPNELKFDVYRSSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L +   Q+R +   I E  K+++
Sbjct: 240 DSAVRVTHLPTGLVVTCQDEKSQHKNKAKALQVLRARLLDKMEQERHD--RISEERKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           G G    +IR+Y   P   V D R N+       V+ G LDD +
Sbjct: 298 GSGDRSERIRTYNF-PQGRVTDHRINLTLYRLDQVMAGMLDDII 340


>gi|119361535|sp|Q24ML9|RF1_DESHY RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 355

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 145/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMYT++AE++ ++TE L     +  G K    LI
Sbjct: 106 DDKNVIMEIRAGAGGEEAALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++ I+ +D RID 
Sbjct: 166 EGQGAYSKLKFESGVHRVQRVPTTESGGRIHTSTTTVAVLPEAEE-VDVAINPNDLRIDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + 
Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQE 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E +  +    ++++G G    +IR+Y   P   V D R  +       +L G+LD+ + A
Sbjct: 283 EAMGELASERRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|269957243|ref|YP_003327032.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305924|gb|ACZ31474.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 366

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/247 (41%), Positives = 144/247 (58%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LE+ AG GG ES  +A  LLRMY R+AE++ + T+ LE  D +  G K   + I
Sbjct: 108 DGRDVILEIKAGEGGEESALFAGDLLRMYLRYAERKGWSTQVLEATDTDLGGYKDVQVAI 167

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +  LK E GVHR+ R+   ++  R HTS + + V+P VDD  E+EI  
Sbjct: 168 KARSVNDPGDGVWAHLKYEGGVHRVQRVPVTETQGRIHTSAAGVLVFPEVDDPGEVEIDP 227

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK QA  +LRA+L 
Sbjct: 228 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEQAMRVLRARLL 287

Query: 286 -ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
              + +   + A++  S    +    +IR+Y   P   + D RT  +  +   VL GDL+
Sbjct: 288 AAQQEEAAAQAADLRRSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLE 346

Query: 345 DFMKATL 351
             +++ +
Sbjct: 347 PVVRSAI 353


>gi|166795303|ref|NP_061914.3| peptide chain release factor 1-like, mitochondrial isoform a [Homo
           sapiens]
 gi|74753314|sp|Q9UGC7|RF1ML_HUMAN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; AltName: Full=mtRF1a; Flags: Precursor
 gi|6706658|emb|CAB65994.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|158254756|dbj|BAF83351.1| unnamed protein product [Homo sapiens]
          Length = 380

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/246 (43%), Positives = 143/246 (58%), Gaps = 9/246 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
           L+  EEI     + K +IG  GR  +IR+Y   P   V D R N         + GD  L
Sbjct: 300 LE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLL 356

Query: 344 DDFMKA 349
           D+ +++
Sbjct: 357 DELVQS 362


>gi|145629736|ref|ZP_01785532.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
 gi|144978073|gb|EDJ87852.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
          Length = 267

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/159 (52%), Positives = 109/159 (68%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   +L+
Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDT
Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHK
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHK 266


>gi|309812101|ref|ZP_07705859.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
 gi|308433788|gb|EFP57662.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
          Length = 362

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 10/250 (4%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  D  LEV AG GG ES  +A  L+RMY R+AE+R +K E  +  D +  G K A +
Sbjct: 98  EDDERDVVLEVKAGEGGAESALFAGDLVRMYLRYAERRGWKAEIADATDADLGGYKDARI 157

Query: 171 LIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE- 222
            ++      P    W  LK E GVHR+ R+   +S  R HTS + + V P +D+  +   
Sbjct: 158 TVRAKGLPEPGEAPWARLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPDLDEDDDEIE 217

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
              +D +ID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ E+SQ +NK  A  +L+A
Sbjct: 218 FGPNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKESALRVLKA 277

Query: 283 KLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +L ++E++++E  A+    S+   +    +IR+Y   P   + D RT  +  +   VLDG
Sbjct: 278 RLRQMEIERKEAEASAARKSQVRTVDRSERIRTYNF-PENRIADHRTGYKSYNLDAVLDG 336

Query: 342 DLDDFMKATL 351
           DLD  +++ L
Sbjct: 337 DLDAVVQSAL 346


>gi|295105808|emb|CBL03351.1| bacterial peptide chain release factor 1 (bRF-1) [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 357

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/256 (39%), Positives = 148/256 (57%), Gaps = 13/256 (5%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F  + +  AD  D  +E+ A AGG E+  +A  L +MY R+A  + +KTE +++   E 
Sbjct: 98  KFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGDLYKMYERFAGAQGWKTETMDVSASEA 157

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     +KG + Y  +K E GVHR+ R+   +S  R HTS +++ V P  D+ +E++
Sbjct: 158 GGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-VEVD 216

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E+D RID YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK  A  +LRA
Sbjct: 217 INENDLRIDVYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRA 276

Query: 283 KLYELELQKR------EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           +LYE  L ++      E +A IG   ++E     +IR+Y   P   V D R     T   
Sbjct: 277 RLYEKMLAEQQAAEGAERLAQIGSGDRSE-----KIRTYN-GPQDRVTDHRIGYNGTYNG 330

Query: 337 DVLDGDLDDFMKATLA 352
            +L   L D + A  A
Sbjct: 331 VLLGDGLGDVITALQA 346


>gi|225022790|ref|ZP_03711982.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305682007|ref|ZP_07404811.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
 gi|224944397|gb|EEG25606.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305658480|gb|EFM47983.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
          Length = 360

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 147/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+ AGAGG E+  +A  L+RMY R+A+K  F TE L + + +  G+K  TL I
Sbjct: 106 DGDDIVMEIKAGAGGEEAALFAGELVRMYQRYADKHGFSTEVLGLSESDLGGVKDMTLSI 165

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P+   A+   K E GVHR+ R+   +S  R  TS + + VYP  D+   +EI + D
Sbjct: 166 RSKQPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEIAAVEIDDKD 225

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  L
Sbjct: 226 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARALQVLAARLQAL 285

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++ E  A  G +++   +    +IR+Y   P   + D R   +  +   VL+GD++D 
Sbjct: 286 AEEQAEAEAAQGRAAQIRTLDRSERIRTYNW-PENRISDHRIGFKANNLDSVLNGDMEDL 344

Query: 347 MKA 349
             A
Sbjct: 345 FTA 347


>gi|15080204|gb|AAH11873.1| Mitochondrial translational release factor 1-like [Homo sapiens]
 gi|119568097|gb|EAW47712.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|119568101|gb|EAW47716.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|312151704|gb|ADQ32364.1| mitochondrial translational release factor 1-like [synthetic
           construct]
          Length = 380

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/246 (43%), Positives = 143/246 (58%), Gaps = 9/246 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
           L+  EEI     + K +IG  GR  +IR+Y   P   V D R N         + GD  L
Sbjct: 300 LE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLL 356

Query: 344 DDFMKA 349
           D+ +++
Sbjct: 357 DELVQS 362


>gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585217|sp|C4LJM5|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 357

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +EV +GAGG E+  +A  L+RMY R+A+K  F  + L+    +  GIK  T+ I
Sbjct: 103 DGDDIVMEVKSGAGGEEAALFAGELVRMYQRYADKHGFAIDVLDDAPTDLGGIKDITMSI 162

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P+   A+   K E GVHR+ R+   +S  R  TS + + VYP  D+  ++EI + D
Sbjct: 163 RSKKPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVRITH+PTG++V CQ+ERSQ +NKA+A  +L A+L ++
Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARAMQVLAARLQQM 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           + ++ E  A+   +++   +    +IR+Y   P   + D R N +  +   VLDGDLDD 
Sbjct: 283 KEEEAEAAASADRAAQVRTMDRSERIRTYNF-PENRISDHRINYKAHNLDQVLDGDLDDL 341

Query: 347 MKA 349
             A
Sbjct: 342 FSA 344


>gi|291524540|emb|CBK90127.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale DSM 17629]
          Length = 358

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/337 (35%), Positives = 176/337 (52%), Gaps = 29/337 (8%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P +  +    K LM+E+  L   +   K+ ++  C   I       ED  +IL E SD 
Sbjct: 21  EPDVANDANRFKKLMKEQSDLAPIVETYKKYKE--CKQNI-------EDSLAILNEESDE 71

Query: 92  LQRIKLEVEYKQFESLLSGEA----------DSND---AYLEVHAGAGGTESQDWANMLL 138
             R   + E K  +  +              D ND     +E+ AGAGG E+  +A  + 
Sbjct: 72  EMRELAKEELKDSKEQVEELEKELKILLLPKDPNDDKNVIVEIRAGAGGEEAALFAAEIY 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY  +AE R +K E L+  +    G+KS   ++KG  AY  LK E GVHR+ R+   +S
Sbjct: 132 RMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVHRVQRVPETES 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R  TS  S+ V P  +D       +   RID  RASG GGQ VNTTDSAVR+TH PTG
Sbjct: 192 QGRIQTSTCSVAVMPEAEDVDVKIDDKDI-RIDVMRASGNGGQCVNTTDSAVRLTHYPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +V+  Q E+SQ +NK +A+ +LR KLY++ELQK+++     E  +++IG G    +IR+Y
Sbjct: 251 IVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAE--AEERRSQIGTGDRAEKIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R N+       +L+GD+ + + A +A
Sbjct: 309 NF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIA 344


>gi|121593273|ref|YP_985169.1| peptide chain release factor 1 [Acidovorax sp. JS42]
 gi|166223524|sp|A1W4B8|RF1_ACISJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120605353|gb|ABM41093.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax sp.
           JS42]
          Length = 367

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 143/248 (57%), Gaps = 14/248 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A++E+ AG GG ES  +A  L RMYTR+A    +K E +  ++ E  G K   L I
Sbjct: 107 DERNAFIEIRAGTGGDESALFAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRI 166

Query: 173 KGPNA--------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +G +         YG LK E G HR+ R+   ++  R HTS  ++ V P  D+   I ++
Sbjct: 167 EGQSGTGPSGSGVYGALKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLN 226

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++
Sbjct: 227 PADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARI 286

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            E E  + E  A      K  IG G    +IR+Y   P   + D R N+       +++G
Sbjct: 287 QEKE--RSERAAKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEG 343

Query: 342 DLDDFMKA 349
           DL + ++A
Sbjct: 344 DLGEVLQA 351


>gi|92116091|ref|YP_575820.1| peptide chain release factor 1 [Nitrobacter hamburgensis X14]
 gi|119361567|sp|Q1QQY7|RF1_NITHX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91798985|gb|ABE61360.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           hamburgensis X14]
          Length = 361

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 144/243 (59%), Gaps = 12/243 (4%)

Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           +LL  +A D  +  LE+ AG GG E+  +A  L RMY R+A  + +K EA+   +G   G
Sbjct: 100 ALLPKDAMDERNVMLEIRAGTGGDEASLFAGDLFRMYERFAGLQGWKVEAISASEGTMGG 159

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     ++G  AY  LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++++I 
Sbjct: 160 YKEIVAEVRGRGAYAKLKFESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDVDIK 218

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV  Q  RSQHKN+A A N+LR+++
Sbjct: 219 TDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRI 278

Query: 285 YELELQKREEIANIGESS--KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           Y+ E Q+     N   S+  K ++G G    +IR+Y   P   V D R N+       V+
Sbjct: 279 YDAERQR----INAARSADRKDQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVI 333

Query: 340 DGD 342
            GD
Sbjct: 334 AGD 336


>gi|222109995|ref|YP_002552259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
 gi|254790879|sp|B9ME05|RF1_DIAST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221729439|gb|ACM32259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
          Length = 367

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/348 (34%), Positives = 185/348 (53%), Gaps = 22/348 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +   +Q L FL ++ ED  +  ++ + + + RE   +          Q R  D     E+
Sbjct: 12  YAQRLQELDFLLSR-ED--IMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68

Query: 76  ALEEDDCSILQET--SDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132
             + D   + QE   +   + ++LE E ++   LL  + D   +A++E+ AG GG ES  
Sbjct: 69  LEDPDMAEMAQEEIHAAETELVQLEDELQRL--LLPKDPDDERNAFIEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNA---YGWLKGE 184
           +A  L RMYTR+A    +K E +  ++ E  G K   L I+G     P+    YG LK E
Sbjct: 127 FAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQPGTGPSGSGVYGALKFE 186

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N
Sbjct: 187 SGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHIN 246

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  + E  A      K 
Sbjct: 247 KTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKE--RSERAAKEAALRKG 304

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            IG G    +IR+Y   P   + D R N+       +++GDL + ++A
Sbjct: 305 LIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQA 351


>gi|158300556|ref|XP_320444.4| AGAP012082-PA [Anopheles gambiae str. PEST]
 gi|157013216|gb|EAA00433.4| AGAP012082-PA [Anopheles gambiae str. PEST]
          Length = 384

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 163/286 (56%), Gaps = 22/286 (7%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           L  NV+E   +  +R+ + + +S +KE++D   D ++ L           L+E  +    
Sbjct: 60  LLSNVVE---MYEQRKIIVDNLSSLKELKDDKDDEMVQL-----------LKEEREAYGS 105

Query: 95  IKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           I   ++ +    +LS   E D     +EV AG GG E+  +A  L  MY  + E + ++ 
Sbjct: 106 ILFRLDSEILNGILSMDDEEDYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEYKGWEV 165

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L+  + +  G + AT +I GP+AY +LK E GVHR+ RI   + + R HTS  ++ + 
Sbjct: 166 EMLQTENTDIGGTRHATTVISGPDAYRYLKHEGGVHRVQRIPATEKSGRIHTSTVTVSII 225

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  DD  ++E+ E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN
Sbjct: 226 PRPDD-FQVELKEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQQKN 284

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +  A   L AKL ++EL+ R   ++     K+++G      +IR+Y
Sbjct: 285 REIAKQKLTAKLMQIELEAR--FSSTQALKKSQVGQSLRNEKIRTY 328


>gi|81428746|ref|YP_395746.1| peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
 gi|119361554|sp|Q38WJ4|RF1_LACSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78610388|emb|CAI55438.1| Peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 365

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 185/359 (51%), Gaps = 23/359 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFI 59
           + +    L GL D      R + L     DP +         L +E   L   +   + +
Sbjct: 1   MDKMFEQLDGLLD------RYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRL 54

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-- 117
           KE+   + +N  LL    + +   +++   + LQ  K ++E  Q   +L    D ND   
Sbjct: 55  KEVLSEVTENEELLRETTDSEMTELVKADLEELQTEKAQLE--QEIKILMLPTDPNDEKN 112

Query: 118 -YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG E+  +A  LL MY R+AE + ++TE ++    E  G K   ++I G N
Sbjct: 113 IIMEIRGAAGGDEASLFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKN 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            Y  LK E G HR+ RI   +S  R HTS +++ V P  D  +++E+   D R+D YRAS
Sbjct: 173 VYSKLKYENGAHRVQRIPKTESQGRVHTSTATVAVMPEYD-GVDVELEAKDIRVDVYRAS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI 295
           GAGGQH+N T SAVR+THIPTG+VV  Q +RSQ +N+ +A  +L+A++Y+  E Q + E 
Sbjct: 232 GAGGQHINKTSSAVRMTHIPTGIVVAMQDQRSQQQNRVKAMKILQARVYDYYESQNQSEY 291

Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +   S K+ +G G    +IR+Y   P   V D R  +       +++G+L D + A +
Sbjct: 292 DS---SRKSAVGSGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGDVIDALI 346


>gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104]
 gi|166223570|sp|A0QCW7|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104]
          Length = 357

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/328 (37%), Positives = 173/328 (52%), Gaps = 21/328 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP L  N  EA+   R    L   +   +++     D     ELA   DD S  
Sbjct: 18  LERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETARELAA--DDDSFT 75

Query: 86  QETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLR 139
            E +D      LE    Q ++ L+         D++D  LEV +G GG ES  +A  L R
Sbjct: 76  AEVAD------LESRVAQLDTQLTDMLAPRDSHDADDIVLEVKSGEGGEESALFAADLAR 129

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRIS 194
           MY R+AE+  +    L+    +  G K ATL I  KG +A G W  +K E GVHR+ R+ 
Sbjct: 130 MYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS + + VYP  ++  E++I ESD RID +R+SG GGQ VNTTDSAVRITH
Sbjct: 190 VTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIR 313
           +PTGVVV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +    +IR
Sbjct: 250 LPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRSERIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +Y   P   + D R   +  +   VLDG
Sbjct: 310 TYNF-PENRITDHRIGFKAHNLDQVLDG 336


>gi|307128516|ref|YP_003880546.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
 gi|306482978|gb|ADM89848.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
          Length = 355

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 153/260 (58%), Gaps = 6/260 (2%)

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           Q ++L++  K+ +     + +  +A +E+ AG GG E+  +   + RMYT + ++  +  
Sbjct: 91  QILELKLILKKIQIYFENQNNHKNALMELRAGTGGDEACIFVEDIFRMYTMYFKELCWNY 150

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E L +  G   G K   L I+G N YG LK E GVHR+ R+   +S  R HTS  ++ ++
Sbjct: 151 EILNMQHGPIKGYKEIILEIQGKNVYGTLKFESGVHRVQRVPYTESQGRLHTSAITVAIF 210

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  D   +I +  SD + DT+RASGAGGQHVN T+SA+R+THIPTG++ +CQ+ERSQHKN
Sbjct: 211 PEEDYKKKINLILSDIKRDTFRASGAGGQHVNKTESAIRLTHIPTGIIAECQEERSQHKN 270

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329
             +A  +LRA++Y+ EL +++E   + +  K  I  G    +IR+Y   P   V D R N
Sbjct: 271 YEKAMKVLRARIYQSELNQKKE--KLSKERKDLISTGDRSAKIRTYNY-PQGRVTDHRIN 327

Query: 330 IEKTSPSDVLDGDLDDFMKA 349
               +    ++G +++ + A
Sbjct: 328 KSIYNLDHFMNGKINEMITA 347


>gi|315080405|gb|EFT52381.1| peptide chain release factor 1 [Propionibacterium acnes HL078PA1]
          Length = 361

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 185/347 (53%), Gaps = 28/347 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +RL  + T+  D  +  +      L +    L + +S    + D+L  ++   E  
Sbjct: 10  DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    L+  ++ L R +L++   +   LL  S   D  DA +E+H+G GG ES  +A
Sbjct: 69  TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191
             LLRMYTR+AE+  +    L     +  G ++  + + G P+   YG+LK E GVHR+ 
Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPVYGYLKHEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302
           +TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+          E +  +R+++  +  S+
Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        +R+Y   P   + D R   +      +L GDL D + A
Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|302327519|gb|ADL26720.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 358

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 11/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+  G GG ES  +A  L RMY  + +K  +K    ++ +G   G K   + I
Sbjct: 108 DYRNATLEIRGGTGGDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG LK E GVHR+ R+   ++  R HTS +++ + P  ++ +++EI E+D  +DT
Sbjct: 168 EGDSVYGTLKFESGVHRVQRVPETETQGRVHTSAATVAILPEAEE-VDVEIREADIHMDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291
           YR+SGAGGQ++N TDSAVR+THIPTGVVV CQ ERSQ +N+  A  MLR+K+ +  + K 
Sbjct: 227 YRSSGAGGQYINKTDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKK 286

Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +EE AN     K  +G G    +IR+Y   P   V D R  +   +   V+ GDLD+ +
Sbjct: 287 EKEEAAN----RKALVGTGDRSAKIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEII 341


>gi|238923860|ref|YP_002937376.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
 gi|259585240|sp|C4Z911|RF1_EUBR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238875535|gb|ACR75242.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
          Length = 358

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/328 (34%), Positives = 180/328 (54%), Gaps = 11/328 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEEDDCSIL-QE 87
           +P +  +    K LM+E+  L   +   K   E +  + D+L +L+   +E+   +  +E
Sbjct: 21  EPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIEDSLAILDEESDEEMRELAKEE 80

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             D+ ++++   +  +   L     D  +  +E+ AGAGG E+  +A  + RMY  +AE 
Sbjct: 81  LKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGGEEAALFAAEIYRMYVHYAEN 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R +K E L+  +    G+KS   ++KG  AY  LK E GVHR+ R+   +S  R  TS  
Sbjct: 141 RGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVHRVQRVPETESQGRIQTSTC 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P  +D       +   RID  RASG GGQ VNTTDSAVR+TH PTG+V+  Q E+
Sbjct: 201 SVAVMPEAEDVDVKIDDKDI-RIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEK 259

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQ +NK +A+ +LR KLY++ELQK+++     E  +++IG G    +IR+Y   P   V 
Sbjct: 260 SQIQNKEKAFALLRTKLYDMELQKKQDAE--AEERRSQIGTGDRAEKIRTYNF-PQGRVT 316

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           D R N+       +L+GD+ + + A +A
Sbjct: 317 DHRINLTLYKLDKILNGDIQEIIDACIA 344


>gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
 gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
          Length = 388

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/270 (38%), Positives = 156/270 (57%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMYTR+AE+  + 
Sbjct: 110 RGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYTRYAERVGWS 169

Query: 152 TEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P+  AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 170 VRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 229

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  +D R+D YR+SG GGQ VNTTDSAVR+TH+PTG+VV CQ ERS
Sbjct: 230 VLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERS 288

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 289 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 339

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL + + A
Sbjct: 340 ENRLTDHRIGYKSRKLDQILAGDLGEVLDA 369


>gi|291334339|gb|ADD93998.1| peptide chain release factor 1 [uncultured marine bacterium
           MedDCM-OCT-S11-C310]
          Length = 355

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/245 (39%), Positives = 146/245 (59%), Gaps = 18/245 (7%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMY+R+AE+  ++ + + + +G + G+K   + +
Sbjct: 106 DDKNVLLEIRAGTGGDEAALFAGDLFRMYSRYAERSGWRVDVMSMSEGTQGGVKEVIVWL 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +    +  +K E GVHR+ R+   +S  R HTS +++ V P  +++ EI+I   D RIDT
Sbjct: 166 RA-TTFFCVKYESGVHRVQRVPATESQGRIHTSAATVAVMPEAEEA-EIDIRNEDLRIDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291
           YR+ GAGGQHVNTTDSAVRITH+PTG+VVQCQ E+SQ KN+A+A  +L ++L +   QK 
Sbjct: 224 YRSQGAGGQHVNTTDSAVRITHLPTGMVVQCQDEKSQIKNRAKAMKVLSSRLLDFIRQKE 283

Query: 292 -------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                  R+E+   G+ S+       +IR+Y   P   + D R      +   VL GDL+
Sbjct: 284 AAERAAERKELVRTGDRSE-------KIRTYNF-PQDRITDHRIGFSAHNLPAVLQGDLE 335

Query: 345 DFMKA 349
             + A
Sbjct: 336 AVLIA 340


>gi|71043904|ref|NP_001020894.1| peptide chain release factor 1-like, mitochondrial precursor
           [Rattus norvegicus]
 gi|81907899|sp|Q4V7E5|RF1ML_RAT RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|66910900|gb|AAH97970.1| Mitochondrial translational release factor 1-like [Rattus
           norvegicus]
          Length = 373

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 160/279 (57%), Gaps = 11/279 (3%)

Query: 78  EEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWAN 135
           E +D   L E+   L Q+   E++++    L+  E  D +D  LEV AG GG E+  + +
Sbjct: 81  ENEDLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTS 140

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            +  MY ++A  +++  E LE    E  G++ A+  I GP AY  +K E GVHR+ R+  
Sbjct: 141 EMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPK 200

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +   R HTS  ++ + P   + I++ I+  D RIDT RASGAGGQHVNTTDSAVRI H+
Sbjct: 201 TERQGRIHTSTMTVAILPQPTE-IKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHL 259

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QI 312
           PTG++ +CQQERSQ KN+  A   LRA+LY + L+  EE A    + K ++G  GR  +I
Sbjct: 260 PTGIISECQQERSQLKNRELAMKKLRARLYSMRLE--EETAKRYSARKIQVGTKGRSEKI 317

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
           R+Y   P   V D R N         + GD  LDD +++
Sbjct: 318 RTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDDLIQS 355


>gi|294623963|ref|ZP_06702760.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601738|gb|EFF45678.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 178

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/143 (59%), Positives = 110/143 (76%), Gaps = 1/143 (0%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RS
Sbjct: 1   MFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 60

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL   + +KDLRT
Sbjct: 61  QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRT 119

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
            IE++    VLDGDLD+F++A+L
Sbjct: 120 GIERSDTQKVLDGDLDEFVEASL 142


>gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|61214644|sp|Q73X48|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 357

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/328 (37%), Positives = 173/328 (52%), Gaps = 21/328 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP L  N  EA+   R    L   +   +++     D     ELA   DD S  
Sbjct: 18  LERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETARELAA--DDDSFT 75

Query: 86  QETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLR 139
            E +D      LE    Q ++ L+         D++D  LEV +G GG ES  +A  L R
Sbjct: 76  AEVAD------LESRVAQLDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLAR 129

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRIS 194
           MY R+AE+  +    L+    +  G K ATL I  KG +A G W  +K E GVHR+ R+ 
Sbjct: 130 MYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS + + VYP  ++  E++I ESD RID +R+SG GGQ VNTTDSAVRITH
Sbjct: 190 VTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIR 313
           +PTGVVV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +    +IR
Sbjct: 250 LPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRSERIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +Y   P   + D R   +  +   VLDG
Sbjct: 310 TYNF-PENRITDHRIGFKAHNLDQVLDG 336


>gi|149195429|ref|ZP_01872512.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
 gi|149134434|gb|EDM22927.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
          Length = 355

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V++ + +N K   P + +++ +   L RE + L+  ++  KE ++ L +NL   ++ L++
Sbjct: 10  VEKYNEINQKLSSPEITKDIKQMTKLSREARSLEEIVNKAKEYEE-LLNNLEEAKMMLDD 68

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANM 136
            + S L +        KL    ++ + LL  + D ND    +LE+ AG GG E+  +   
Sbjct: 69  AEMSELAKEEIKEIEEKLPKLEEEIKLLLLPK-DPNDDKNIFLEIRAGTGGDEAALFVGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L++ Y R+A+ + +K E +     +  G K   LLIKG  AY  LK E G HR+ RI   
Sbjct: 128 LMKAYLRYADNKGWKVEIVSESKNDIGGYKEIILLIKGEGAYSRLKYEGGTHRVQRIPAT 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ V P VDD ++IE+   D +I+  RA GAGGQHVN T+SAVR+THIP
Sbjct: 188 ESQGRIHTSAVTVAVMPEVDD-VDIELDPKDIKIEVMRAGGAGGQHVNKTESAVRMTHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V  Q ERSQ +NK +A  +L+A++YE +L+K E +  IG+  K+++G G    +IR
Sbjct: 247 TGITVSMQDERSQQRNKEKALQILKARVYE-KLEK-ERLEKIGKERKSQVGSGDRSERIR 304

Query: 314 SY 315
           +Y
Sbjct: 305 TY 306


>gi|115522190|ref|YP_779101.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisA53]
 gi|122298096|sp|Q07VB3|RF1_RHOP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115516137|gb|ABJ04121.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisA53]
          Length = 359

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/241 (41%), Positives = 145/241 (60%), Gaps = 8/241 (3%)

Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           +LL  +A D  +  LEV AG GG E+  +A  L RMY ++A  + +  E +   +G   G
Sbjct: 100 ALLPKDAMDDRNVMLEVRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGAAGG 159

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V++ +++EI 
Sbjct: 160 FKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVMPEVEE-VDVEIK 218

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV  Q  RSQHKN+A A N+LR+++
Sbjct: 219 QDDLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRI 278

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E Q+R + A   E  K ++G G    +IR+Y   P   V D R N+       V+ G
Sbjct: 279 YDAE-QQRLDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAG 335

Query: 342 D 342
           +
Sbjct: 336 E 336


>gi|256370594|ref|YP_003108419.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009386|gb|ACU52746.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
          Length = 348

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/336 (35%), Positives = 181/336 (53%), Gaps = 27/336 (8%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISF----------IKEIQDRLCDNLILLELALEEDDC 82
           P + +N  +  +L +E + L   I++          IKEI++ L  +  LLELA  E   
Sbjct: 27  PEIIKNYKKYILLSKEYKFLYKIINYYNNLKKNKTNIKEIENLLKKDSELLELAFLEKK- 85

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           ++  E    L +I         E+LL  + + N   +E+ AG GG E+  +   + RMYT
Sbjct: 86  NLFLEKKKILNKI---------ENLLK-KKNYNKILMELRAGTGGDEACIFVEDIFRMYT 135

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            + ++  +K + L +  G   G K   L I+G N Y  LK E GVHR+ RI   +S  R 
Sbjct: 136 LYFKELGWKYDILNMQQGSIKGYKEIILEIEGKNVYDKLKFESGVHRVQRIPYTESQGRL 195

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  ++ V P       I+I  SD + +T++ASGAGGQHVN T+SA+R+THIPTG+V +
Sbjct: 196 HTSAITVAVIPENYYKNNIKIVLSDLKRETFKASGAGGQHVNKTESAIRLTHIPTGIVAE 255

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
           CQ+ERSQHKN  +A  +LRA++Y  E +K+ E+  + +  K+ I  G    +IR+Y   P
Sbjct: 256 CQEERSQHKNYEKAIKVLRARIYNSEFKKKNEL--LSKKRKSLISTGERSEKIRTYNY-P 312

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              V D R N         ++G L++ + A   ++K
Sbjct: 313 QGRVTDHRINKSIYYLDHFMNGKLNEMITALQILEK 348


>gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18]
 gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18]
          Length = 360

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/266 (40%), Positives = 156/266 (58%), Gaps = 12/266 (4%)

Query: 96  KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           +LEV  ++   LL      D  +  LEV AGAGG E+  +A  LLRMY R+AE + +KTE
Sbjct: 81  ELEVAQEKLRRLLIPRDPDDGRNVILEVKAGAGGDEAALFAGDLLRMYMRYAEHKGWKTE 140

Query: 154 ALEIHDGEEAGIKSATLLIKG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +     +  G K A + IKG    P    W  LK E GVHR+ R+   +S  R HTS +
Sbjct: 141 IISSTSTDVGGYKDAQIAIKGSSNEPAEGVWAHLKYEGGVHRVQRVPATESQGRIHTSAA 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
            + V+P VD+  EIEI+++D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+
Sbjct: 201 GVLVFPEVDEPEEIEINQNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEK 260

Query: 268 SQHKNKAQAWNMLRAKL--YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           SQ +N+  A  +LRA+L  ++ E    E  A+     +T +    +IR+Y   P   + D
Sbjct: 261 SQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVRT-MDRSERIRTYNF-PENRIAD 318

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            RT  +  +   VL+GDL+  +++ +
Sbjct: 319 HRTGYKAYNLDAVLNGDLEPVVQSAI 344


>gi|172058704|ref|YP_001815164.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
 gi|229576657|sp|B1YEH9|RF1_EXIS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171991225|gb|ACB62147.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
          Length = 352

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/260 (38%), Positives = 151/260 (58%), Gaps = 13/260 (5%)

Query: 97  LEVEYKQFESLLSG---EADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           LE E K  E+ L       D ND     +E+   AGG E+  +A  L +MY+++AEK+ +
Sbjct: 81  LEPEIKDLETKLKALLLPKDPNDDKNVIVEIRGAAGGDEAALFAGDLFKMYSKFAEKQNW 140

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E ++    E  G K    ++KG  AY  LK E G HR+ R+   +S  R HTS +++ 
Sbjct: 141 KIEIIDASYTELGGYKEIIFIVKGSGAYSKLKYENGAHRVQRVPSTESGGRIHTSTATVA 200

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P  +D +E+EI + D R+DT+ +SG GGQ VNTT SAVR+TH+PTG+V  CQ E+SQ 
Sbjct: 201 VLPEAED-VEVEIHDKDVRVDTFTSSGPGGQSVNTTQSAVRVTHVPTGIVASCQDEKSQI 259

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
           KNK +A  +LRA++Y+ ++Q RE+ A   E  K+ +G G    +IR+Y       V D R
Sbjct: 260 KNKEKAMKVLRARVYD-KIQ-REQQAEYDEKRKSAVGTGDRSERIRTYNF-AQNRVTDHR 316

Query: 328 TNIEKTSPSDVLDGDLDDFM 347
             +       +L G++D+ +
Sbjct: 317 IGLTIQKLDRILQGEMDEVI 336


>gi|322379189|ref|ZP_08053581.1| peptide chain release factor 1 [Helicobacter suis HS1]
 gi|322379995|ref|ZP_08054263.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321147584|gb|EFX42216.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321148391|gb|EFX42899.1| peptide chain release factor 1 [Helicobacter suis HS1]
          Length = 352

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 23/345 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLE-- 74
           V R   L      P +  +V     L +E+  L+      K   +I D++ +N  LLE  
Sbjct: 10  VARYDALALCLTQPEVLNDVKRLTELSKEQASLEELAQAAKRYLKILDQIQENKALLEDK 69

Query: 75  --LALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               L +++   L+E S NL   IK+ +  K          DS + YLE+ AG GG E+ 
Sbjct: 70  ELGELAKEELKSLEEQSKNLGDHIKILLIPKD-------PNDSKNIYLELRAGTGGDEAG 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L R Y R+A+ +++K E +   +    G K    LIKG   Y  LK E G HR+ 
Sbjct: 123 IFVGDLFRTYCRYADLKRWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  DD +EI I+ SD RI+ +RA G GGQ VNTTDSAVR
Sbjct: 183 RVPETESQGRIHTSAITVAIMPEADD-VEININPSDLRIEVFRAGGHGGQCVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+ V  Q E+SQHKN+ +A  +L+A+LYE +++++++ A+  E  K ++G G  
Sbjct: 242 ITHIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQ-AHSAE-RKMQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+   S  ++ L G+LD  ++  +A
Sbjct: 300 SERIRTYNY-PQNRLSDHRINLTLYSLEELMLSGNLDPVIEPLIA 343


>gi|261416348|ref|YP_003250031.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372804|gb|ACX75549.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 355

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 11/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+  G GG ES  +A  L RMY  + +K  +K    ++ +G   G K   + I
Sbjct: 105 DYRNATLEIRGGTGGDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + YG LK E GVHR+ R+   ++  R HTS +++ + P  ++ +++EI E+D  +DT
Sbjct: 165 EGDSVYGTLKFESGVHRVQRVPETETQGRVHTSAATVAILPEAEE-VDVEIREADIHMDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291
           YR+SGAGGQ++N TDSAVR+THIPTGVVV CQ ERSQ +N+  A  MLR+K+ +  + K 
Sbjct: 224 YRSSGAGGQYINKTDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKK 283

Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +EE AN     K  +G G    +IR+Y   P   V D R  +   +   V+ GDLD+ +
Sbjct: 284 EKEEAAN----RKALVGTGDRSAKIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEII 338


>gi|193211744|ref|YP_001997697.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
 gi|238692678|sp|B3QRH7|RF1_CHLP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193085221|gb|ACF10497.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
          Length = 357

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/247 (36%), Positives = 155/247 (62%), Gaps = 8/247 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-I 165
           L   EAD+ +A +E+ AG GG E+  +A  L+RMY R+AE++ +  + L++ +G   G +
Sbjct: 100 LPKDEADTRNAIIEIRAGTGGDEAGLFAADLMRMYQRYAERQGWSCQTLDVSEGSVPGSL 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  +L + G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++ +++EI +
Sbjct: 160 KEVSLEVSGHDVYGILKFESGVHRVQRVPETETQGRIHTSAASVAVLPEAEE-VDVEIRK 218

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D ++DT+R+ G GGQ+VN  ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY
Sbjct: 219 DDLQMDTFRSGGKGGQNVNKVETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLY 278

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           ++++   E++ +  +  ++ +  G    +IR+Y   P   V D R      +   V+ G+
Sbjct: 279 DIKIT--EQLQSRADLRRSMVATGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQVMQGE 335

Query: 343 LDDFMKA 349
           L+  + A
Sbjct: 336 LEPIIDA 342


>gi|148543687|ref|YP_001271057.1| peptide chain release factor 1 [Lactobacillus reuteri DSM 20016]
 gi|227363334|ref|ZP_03847463.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227544508|ref|ZP_03974557.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300909304|ref|ZP_07126765.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|325682058|ref|ZP_08161576.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
 gi|148530721|gb|ABQ82720.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           reuteri DSM 20016]
 gi|227071641|gb|EEI09935.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227185531|gb|EEI65602.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300893169|gb|EFK86528.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|324978702|gb|EGC15651.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
          Length = 362

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 188/348 (54%), Gaps = 14/348 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L   +   +  K++   + D
Sbjct: 6   IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISD 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           +  LL    ++D  ++ +E     +  + ++E K+ E LL      D  +  +E+   AG
Sbjct: 66  DEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIRGAAG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK E G
Sbjct: 125 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  +D ++++I   D R+D YR+SGAGGQHVN T
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   Q++E+ A   +  K  I
Sbjct: 244 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY-YQQQEQSA-YDQKRKDAI 301

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +
Sbjct: 302 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALI 348


>gi|149038509|gb|EDL92839.1| rCG41113 [Rattus norvegicus]
          Length = 384

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 160/279 (57%), Gaps = 11/279 (3%)

Query: 78  EEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWAN 135
           E +D   L E+   L Q+   E++++    L+  E  D +D  LEV AG GG E+  + +
Sbjct: 92  ENEDLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTS 151

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            +  MY ++A  +++  E LE    E  G++ A+  I GP AY  +K E GVHR+ R+  
Sbjct: 152 EMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPK 211

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +   R HTS  ++ + P   + I++ I+  D RIDT RASGAGGQHVNTTDSAVRI H+
Sbjct: 212 TERQGRIHTSTMTVAILPQPTE-IKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHL 270

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QI 312
           PTG++ +CQQERSQ KN+  A   LRA+LY + L+  EE A    + K ++G  GR  +I
Sbjct: 271 PTGIISECQQERSQLKNRELAMKKLRARLYSMRLE--EETAKRYSARKIQVGTKGRSEKI 328

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
           R+Y   P   V D R N         + GD  LDD +++
Sbjct: 329 RTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDDLIQS 366


>gi|220920161|ref|YP_002495462.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
 gi|254790889|sp|B8IUB4|RF1_METNO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219944767|gb|ACL55159.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
          Length = 359

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/318 (36%), Positives = 173/318 (54%), Gaps = 23/318 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD-NLILLELALEEDDCSILQETSDNLQRIKLEVEYK- 102
           L RE   LD+ ++ I+    R  D  L  +E  LEE D  +    ++     K EVE   
Sbjct: 36  LSRELSDLDDVVAAIRAY--RAADAELRGVEAMLEEGDPEMRALAAEE----KPEVEAAR 89

Query: 103 -------QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
                  Q   L    AD   A LE+ AG GG E+  +A  L RMY R+A+ + +K E +
Sbjct: 90  DAAAKALQILLLPKDSADEKSAILEIRAGTGGDEAALFAGDLFRMYARYADLKGWKVEVV 149

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
               G   G +     +KG   +  LK E G HR+ R+   ++  R HTS +++ V P  
Sbjct: 150 SESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQRVPETETQGRIHTSAATVAVLPEA 209

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           ++ ++I ++E+D +IDT RA GAGGQHVN T+SA+RITH+P+G+VV  Q+ERSQHKN+A+
Sbjct: 210 EE-VDIHVNEADLKIDTMRAQGAGGQHVNKTESAIRITHMPSGIVVFVQEERSQHKNRAR 268

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A  +LRA+LYE E  + ++ A      + ++G G    +IR+Y   P   V D R N+  
Sbjct: 269 AMAVLRARLYEQE--RSQKDAARAADRRAQVGSGDRSERIRTYNF-PQGRVTDHRINLTL 325

Query: 333 TSPSDVLDGD-LDDFMKA 349
               +VL G  LD+ + A
Sbjct: 326 YKLEEVLAGTALDELVDA 343


>gi|115375817|ref|ZP_01463069.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|310822927|ref|YP_003955285.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|115367205|gb|EAU66188.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|309395999|gb|ADO73458.1| Peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
          Length = 366

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 190/337 (56%), Gaps = 14/337 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-- 78
           +R   L     +P +  +  + + + +ER  L+  +   +  +  L D L  +E  L+  
Sbjct: 10  RRFERLTADLSNPDVLADSAKLQKVSKERAALEKLVETFRTYRKVLGD-LAEVEAWLDGG 68

Query: 79  -EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136
             D+ +  +E    L++ + E E +    LL  +  D  D  LE+ AGAGG E+  +A  
Sbjct: 69  DADEKAYAREALPGLKQQREEFEQELKILLLPKDPNDEKDVILEIRAGAGGDEAGLFAEE 128

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           +++MY R+A +R +K + +++  G   G+K  T+ + G   +  +K E GVHR+ R+   
Sbjct: 129 VMQMYLRYATRRGWKADIVDMSPGSVGGVKDVTITLSGAAVFSNMKYESGVHRVQRVPAT 188

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  +D ++++I+ +D  +   R++G+GGQ VNTTDSAVR+ H P
Sbjct: 189 ETQGRIHTSTITVSVMPEAED-VDVQINPADIEMQVMRSTGSGGQSVNTTDSAVRLIHKP 247

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG---RQI 312
           +G+VV+CQQE+SQ KN+AQA  MLRAKLYE+E ++ R E  ++    + ++G G    +I
Sbjct: 248 SGIVVKCQQEKSQTKNRAQAMRMLRAKLYEIEQERIRSERDSM---RRGQVGTGDRSEKI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           R+Y   P   + D R ++   +   ++ G +DD + A
Sbjct: 305 RTYNF-PQDRLTDHRISLTVHNLPGIMAGGIDDVITA 340


>gi|46199879|ref|YP_005546.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55981909|ref|YP_145206.1| peptide chain release factor 1 [Thermus thermophilus HB8]
 gi|2500140|sp|P96077|RF1_THET8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81567592|sp|Q72HB8|RF1_THET2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88192257|pdb|2B64|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|209156517|pdb|3D5A|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156573|pdb|3D5C|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|300508626|pdb|3MR8|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508681|pdb|3MS0|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s).
 gi|1785848|dbj|BAA13349.1| peptide chain release factor 1 [Thermus thermophilus]
 gi|46197506|gb|AAS81919.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55773322|dbj|BAD71763.1| peptide chain release factor 1 (RF-1) [Thermus thermophilus HB8]
          Length = 354

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 170/323 (52%), Gaps = 10/323 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP + ++    + L R    +   I  I+E + ++ ++L   E  L++ +   + +    
Sbjct: 21  DPEVLKDKGRYQSLSRRYAEMGEVIGLIREYR-KVLEDLEQAESLLDDPELKEMAKAERE 79

Query: 92  LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
               + E   K+ E   L     D  DA +E+ AG GG E+  +A  L  MY R+AE+  
Sbjct: 80  ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ H  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEVLDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++  +  ++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEEE-DFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G    +IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349
           R          VL G L   ++A
Sbjct: 316 RIGFTTHDLEGVLSGHLTPILEA 338


>gi|184153097|ref|YP_001841438.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
 gi|238058717|sp|B2G676|RF1_LACRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183224441|dbj|BAG24958.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
          Length = 360

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 188/348 (54%), Gaps = 14/348 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L   +   +  K++   + D
Sbjct: 4   IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           +  LL    ++D  ++ +E     +  + ++E K+ E LL      D  +  +E+   AG
Sbjct: 64  DEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK E G
Sbjct: 123 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  +D ++++I   D R+D YR+SGAGGQHVN T
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   Q++E+ A   +  K  I
Sbjct: 242 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY-YQQQEQSA-YDQKRKDAI 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALI 346


>gi|291243180|ref|XP_002741481.1| PREDICTED: CG5705-like [Saccoglossus kowalevskii]
          Length = 411

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/206 (42%), Positives = 135/206 (65%), Gaps = 6/206 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D  +E+ AG GG E+  +A  +  MY R+A  ++++ + L++   +  GI+ AT+ +
Sbjct: 149 DTSDVLVEISAGVGGQEAMLFAAEMFEMYQRYAHFQRWQFDVLDVGKSDIGGIRHATVSV 208

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            GP  Y ++K E GVHR+ R+   +   R HTS  ++ V P   + I+++I  SD +I+T
Sbjct: 209 SGPGVYSYMKYEGGVHRVQRVPKTEKQGRVHTSTMTVAVLPQPRE-IDLQIKPSDLKIET 267

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVNTTDSAVRI H+PTG+  +CQQERSQ KNKA A  +L  +LY  +L+++
Sbjct: 268 KRASGAGGQHVNTTDSAVRIVHLPTGIAAECQQERSQIKNKAMAMKVLETRLYNKQLEEQ 327

Query: 293 EEIANIGESSKTEIG-WGR--QIRSY 315
           + I    +S K ++G  GR  +IR+Y
Sbjct: 328 QHIQR--QSRKLQVGSSGRSEKIRTY 351


>gi|297559304|ref|YP_003678278.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843752|gb|ADH65772.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 356

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/332 (34%), Positives = 170/332 (51%), Gaps = 12/332 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  +   A+ L +    L   I   + +++   D     ELA E  D S  
Sbjct: 13  LEQQLADPEVHADQARARTLGKRYAQLTPIIETYRALKEVESDIDTARELAAE--DSSFA 70

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E     +  +   E  +   +    AD  +  +EV AG GG ES  +A  L+RMY R+A
Sbjct: 71  EEADRLTEEAERLTERLRVLLIPRDPADDKNLIMEVKAGEGGEESALFAGDLVRMYLRYA 130

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISPYDS 198
           E++ +KTE ++    +  G K  T+  K       G   +  LK E GVHR+ R+   +S
Sbjct: 131 ERQGWKTEVIDSTHSDLGGYKDITIAFKNKGTPEPGSGVWPMLKFEGGVHRVQRVPVTES 190

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS + + V P  +D IE+EI E D R+D YR+SG GGQ VNTTDSAVRITH+PTG
Sbjct: 191 QGRIHTSAAGVLVVPEAED-IEVEIHEKDLRVDVYRSSGPGGQSVNTTDSAVRITHLPTG 249

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVL 317
           +V  CQ E+SQ +NK QA  +LRA++Y       +  A     S+   +    ++R+Y  
Sbjct: 250 IVASCQNEKSQLQNKEQAMRILRARIYAEAQASADAEAAAERKSQVRTVDRSERVRTYNF 309

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            P   + D R   +  +   VLDG+L   +KA
Sbjct: 310 -PENRISDHRVGYKAYNLDQVLDGELGGVVKA 340


>gi|189485187|ref|YP_001956128.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|238054475|sp|B1GZI5|RF1_UNCTG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170287146|dbj|BAG13667.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 356

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 140/232 (60%), Gaps = 7/232 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +   L  MYTR+AE+  +K E L  +     G K     I G   +
Sbjct: 112 VEIRAGTGGNEAALFVGDLYGMYTRFAERNGWKYEVLGSNPTGLGGYKEVVFEINGGKVW 171

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
              K E+G HR+ R+   +++ R HTS +++ V P  ++ +++EI   D RIDTYRASGA
Sbjct: 172 RCFKFERGAHRVQRVPETEASGRVHTSAATVAVLPEAEE-VDVEIKMEDLRIDTYRASGA 230

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N TDSA+RITH+PTG+VV CQ ERSQ KN+A+A+ +LRAK+YE  + + E    +
Sbjct: 231 GGQHINKTDSAIRITHLPTGLVVACQDERSQIKNRAKAFKVLRAKIYEQRILEHE--MRL 288

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
               K +IG G    +IR+Y   P   + D R      + ++V+DG+L + +
Sbjct: 289 SSERKQQIGSGDRSEKIRTYNF-PQNRITDHRIGYSVYNITEVMDGNLSELV 339


>gi|315649892|ref|ZP_07902974.1| peptide chain release factor 1 [Paenibacillus vortex V453]
 gi|315274691|gb|EFU38073.1| peptide chain release factor 1 [Paenibacillus vortex V453]
          Length = 355

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/240 (37%), Positives = 146/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I
Sbjct: 106 DDKNVIIEIRGAAGGDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ RI   +S  R HTS S++ V P  ++ ++IEI + D R+DT
Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVAVMPEAEE-VDIEIHDKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA+++  ++ ++
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKDKALQVLRARIF--DMMRQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A      K+++G G    +IR+Y   P   V D R  +       V++G++++ + A
Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSA 341


>gi|188580162|ref|YP_001923607.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
 gi|226739114|sp|B1Z914|RF1_METPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179343660|gb|ACB79072.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
          Length = 361

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 146/242 (60%), Gaps = 8/242 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +A  L RMY ++AE + ++ E +   +G   G +     
Sbjct: 108 ADEKSAILEIRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAE 167

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG + +  LK E G HR+ R+   ++  R HTS +++ V P  ++ ++I I+E+D +ID
Sbjct: 168 VKGRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEE-VDIAINEADLKID 226

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+RITH+PTGVVV  Q+ERSQHKN+A+A  +LR+KL++ E   
Sbjct: 227 TMRAQGAGGQHVNKTESAIRITHMPTGVVVFVQEERSQHKNRARAMALLRSKLFDAERTA 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           ++  +      K ++G G    +IR+Y   P   V D R N+      +V+ G  LD+ +
Sbjct: 287 KD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVI 343

Query: 348 KA 349
            A
Sbjct: 344 DA 345


>gi|302334925|ref|YP_003800132.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
 gi|301318765|gb|ADK67252.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
          Length = 355

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 177/339 (52%), Gaps = 15/339 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
           L  +  DP +  +  E   + +E       ++  +E    L D  +  E+  E  D S  
Sbjct: 15  LEKRMVDPTVVSDPKEYARIAKEHASQAELVAKAREYVGALDDIEVAKEMQRETSDASEK 74

Query: 84  -ILQE--TSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139
            +LQE   ++  +   LE E K    L+ G+  D  +  +E+ AG GG E+  +A  L  
Sbjct: 75  EMLQEDIGANEAKLPALEDEIKVM--LIPGDPNDEKNTIVEIRAGVGGDEAAIFAGDLYN 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+A   K+KTE L     E  G K+    + G   +  +K E GVHR+ RI   +S 
Sbjct: 133 MYARFASTHKWKTEVLSSSPSEAGGFKTIEFKVTGDKVFSVMKFESGVHRVQRIPKTESQ 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R  TS +++ V P  D+ I+IEI + D RIDTY ASG GGQ VNTT SAVRITH+PT  
Sbjct: 193 GRIQTSTATVAVLPEADE-IDIEIKDEDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNT 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VVQ Q +RSQ +N+A    MLRA+LYE+EL+K++  A  G +   +IG G    +IR+Y 
Sbjct: 252 VVQSQDQRSQIQNRAVCMEMLRARLYEVELEKQQ--AEQGAARLGQIGHGSRAEKIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            QP   V D R     T    +L   L + + A  A ++
Sbjct: 310 -QPQDRVTDHRIGFNSTYNGVLLGDRLPEVIDALAAAER 347


>gi|160916055|ref|ZP_02078262.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
 gi|158431779|gb|EDP10068.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
          Length = 357

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS++A +E+   AGG E   +A  L RMY+++AE + ++ E +E+ D E  G    + ++
Sbjct: 108 DSHNAIVEIRGAAGGDEGNIFAGDLYRMYSKYAESQGWRIEIIEMDDCEAGGFSLVSFMV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   YG LK E G HR+ R+   +S  R HTS +++ V P ++ + + +I  +D  I+T
Sbjct: 168 KGDGVYGRLKFESGSHRVQRVPKTESQGRIHTSTATVLVTPEIE-AEDFDIDMNDLEIET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQH+N TDSAVRI H PTG+VV+CQ  RSQH+N+A A   +R+++YE   +K 
Sbjct: 227 MRASGAGGQHINKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKL 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE   +   SK  IG G    +IR+Y   P   V D R          +++G + D + A
Sbjct: 287 EEEQGVERRSK--IGTGDRAEKIRTYNY-PQNRVTDHRIGYNVNQLDRIMEGRMQDLLDA 343


>gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Prosthecochloris vibrioformis DSM
           265]
 gi|189039984|sp|A4SCF1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 357

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/294 (35%), Positives = 174/294 (59%), Gaps = 11/294 (3%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYL 119
           I+ +L D+  LL+   +++  ++++E  + LQR    LE E K    L   EADS +  L
Sbjct: 54  IKKQLEDSRQLLKNEQDQEMKALVEEEIEELQRQIPALEQEIKVL-LLPKDEADSRNVIL 112

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAY 178
           E+ AG GG E+  +   L RMY R+AEK+ +  + L+ ++     G + AT+ I G + +
Sbjct: 113 EIRAGTGGEEAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGGFREATISITGHDVF 172

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G +K E GVHR+ R+   ++  R HTS +S+ V P  ++ +++EI + D R+DTYR+ G 
Sbjct: 173 GTMKYESGVHRVQRVPDTETQGRIHTSAASVAVLPEAEE-VDVEIRKEDLRLDTYRSGGK 231

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLRAKL++++L ++++    
Sbjct: 232 GGQNVNKVETAVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLFDIQLAEQQQAR-- 289

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +  +T +  G    +IR+Y   P   V D R      +    + G++ + + A
Sbjct: 290 ADLRRTMVATGDRSAKIRTYNY-PQSRVTDHRIGFTTHALPQFMQGEIGELIDA 342


>gi|219670829|ref|YP_002461264.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
 gi|254790878|sp|B8FZ76|RF1_DESHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219541089|gb|ACL22828.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
          Length = 355

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 144/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  L RMYT++AE + ++TE L     +  G K    LI
Sbjct: 106 DDKNVIMEIRAGAGGEEAALFAGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++ I+ +D RID 
Sbjct: 166 EGQGAYSKLKFESGVHRVQRVPTTESGGRIHTSTTTVAVLPEAEE-VDVAINPNDLRIDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + 
Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQE 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E +  +    ++++G G    +IR+Y   P   V D R  +       +L G+LD+ + A
Sbjct: 283 EAMGELASERRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|118088382|ref|XP_419682.2| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Gallus gallus]
          Length = 394

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/224 (44%), Positives = 139/224 (62%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D++D  +EV AG GG E+  + + +  MY R+A  +K+K E LE    E  G++ A
Sbjct: 134 SEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHA 193

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
              I G +AY ++K E GVHR+ R+   +   R HTS  ++ + P   + +E++I+  D 
Sbjct: 194 VASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MELKINPKDL 252

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RI+T RASGAGGQHVNTTDSAVRI HIPTGV  +CQQERSQ +NK +A  ML AKLY ++
Sbjct: 253 RIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQMLCAKLYNIK 312

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE      + K +IG  GR  +IR+Y   P   + D R +
Sbjct: 313 LE--EENKKRNSARKIQIGTKGRSEKIRTYNF-PQDRITDHRIS 353


>gi|291514939|emb|CBK64149.1| bacterial peptide chain release factor 1 (bRF-1) [Alistipes shahii
           WAL 8301]
          Length = 361

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 7/236 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A +E+  G GG E+  +A  LLRMYT++ E + ++ E     DG   G K   L +
Sbjct: 111 DSKNAIVEIRGGTGGDEAAIFAGDLLRMYTKYIESKGWRYEITSSSDGAAGGFKEVVLKV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  +IEIS +D R D 
Sbjct: 171 SGQNVYGTLKYESGVHRVQRVPQTETQGRVHTSAASVAVLPEAEE-FDIEISMNDIRKDI 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ASG GGQ VNTT SA+R+THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K 
Sbjct: 230 FCASGPGGQSVNTTYSAIRLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKY 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
             +  I    KT +  G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 290 --LDEIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 342


>gi|39933683|ref|NP_945959.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192289040|ref|YP_001989645.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
 gi|61214634|sp|Q6NC66|RF1_RHOPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229470355|sp|B3QCF6|RF1_RHOPT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39647529|emb|CAE26050.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192282789|gb|ACE99169.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
          Length = 361

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 168/296 (56%), Gaps = 9/296 (3%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSG 110
           L  A+   ++++D L +   LLE    E +   + E   D L   + E+  +   +LL  
Sbjct: 45  LVEAVKSYRQVRDELGEIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPK 104

Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           +A D  +  LE+ AG GG E+  +A  L RMY ++A  + +  E +   +G   G K   
Sbjct: 105 DAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGYKEII 164

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V+D ++++I + D R
Sbjct: 165 AEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVED-VDVDIKQDDLR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           I+T RA GAGGQHVN T+SA+RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E 
Sbjct: 224 IETMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAE- 282

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           Q+R + A   E  K ++G G    +IR+Y   P   V D R N+       V+ G+
Sbjct: 283 QQRLDAARSAE-RKAKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 336


>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
 gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
 gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|122263928|sp|Q03A29|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693030|sp|B3WDK7|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei ATCC 334]
 gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
 gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei LC2W]
 gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei BD-II]
          Length = 359

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 191/352 (54%), Gaps = 21/352 (5%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD- 68
           L GL D    +Q L        DP +  +      L +E   + + ++  K+ +  L D 
Sbjct: 8   LDGLLDRYEELQEL------MSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDI 61

Query: 69  --NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAG 124
             +  +L  + ++D  ++ +E  ++LQ+ K ++E  Q + L+      D  +  +E+   
Sbjct: 62  KESEEVLRESKDDDMEALAKEDLEDLQKQKADLE-DQIKVLMLPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  LL MY  +AE++ +KTE ++    E  G K   ++I G N Y  LK E
Sbjct: 121 AGGDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  D+ ++++I   D R D YR+SGAGGQHVN
Sbjct: 181 NGAHRVQRVPVTESAGRVHTSTATVGVMPEYDE-VDLKIDPKDIRTDVYRSSGAGGQHVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSK 303
            T SAVR+THIP+G+VV  Q ERSQ +N+A+A  +LR+++Y+  E Q +E+     ++ K
Sbjct: 240 KTSSAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEK---YDQNRK 296

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             IG G    +IR+Y   P   V D R  +       +++G+LD+ + A + 
Sbjct: 297 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 347


>gi|66810982|ref|XP_639198.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
 gi|60467811|gb|EAL65826.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
          Length = 430

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 189/352 (53%), Gaps = 24/352 (6%)

Query: 18  NAVQRLSFLNTKTE------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           N V RL+ +  K++      D ++     E K + +E Q     + +  ++ ++L +   
Sbjct: 74  NIVFRLNLMGKKSKELRNMIDSNMGLGQSEIKKISKELQETAEPLGYFGDLIEKLKELKE 133

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEAD-SNDAYLEVHAGAG 126
           L  + +EE D    Q    ++ ++K E    +E +   SLL G  D + DA LE+ AG G
Sbjct: 134 LQTMLVEETDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAGDAILEIRAGTG 193

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G+E+Q +   +  MY  +  ++ +  E LE+   E  G +  T+ + G   +G+LK E G
Sbjct: 194 GSEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKYESG 253

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ + P   D ++I+I + D ++D YR+SG GGQ VNTT
Sbjct: 254 VHRVQRVPLTETQGRIHTSTITVAILPEPKD-VDIQIHDRDLKVDIYRSSGNGGQSVNTT 312

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---LQKR---EEIANIGE 300
           DSAVRITH+PTG+ V  Q ERSQH+N+++A  +L+A++YE E   LQ     E  A IG 
Sbjct: 313 DSAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQNERVSERNAQIGS 372

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + ++E     +IR+Y   P   + D R +I     S +    LD F+   L 
Sbjct: 373 ALRSE-----RIRTYNY-PQDRITDHRVSINGNLNSCMNSDGLDSFIDEILV 418


>gi|254457086|ref|ZP_05070514.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
 gi|207085878|gb|EDZ63162.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
          Length = 355

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/236 (41%), Positives = 143/236 (60%), Gaps = 7/236 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +   L   YTR+AE + +K E L     +  G K    LI
Sbjct: 104 DDRNIIVELRAGAGGDEAAIFVGDLFDAYTRYAEVKGWKVELLSTSPSDAGGFKEVIALI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G+HR+ R+   +S  R HTS  ++ V P VDD +E+ I+E+D +ID 
Sbjct: 164 KGDQVYSRLKYEGGIHRVQRVPETESQGRVHTSAITVAVMPEVDD-VEVVINENDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITH+PTG+VV  Q ++SQHKNK +A  +L+A+LY+LE+Q+ 
Sbjct: 223 MRSSGCGGQSVNTTDSAVRITHLPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQEA 282

Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +  +   E+   ++G G    +IR+Y   P   + D R  +     +++++G L D
Sbjct: 283 Q--SKDSEARLAQVGSGDRSGRIRTYNY-PQNRMSDHRITLTLYRLNEIMNGGLLD 335


>gi|312890071|ref|ZP_07749615.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
 gi|311297603|gb|EFQ74728.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
          Length = 357

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A +E+  G GG E+  +A  L RMY R+ EK+ +KTE ++  +G   G K     +
Sbjct: 106 DSRNAIVEIRGGTGGDEAALFAGDLYRMYIRFCEKQGWKTELVDFTEGTAGGYKEIVFNV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
              +AYG LK E GVHR+ R+   ++  R HTS +S+ V P  D+  +++I  +D R D 
Sbjct: 166 LAEDAYGTLKYESGVHRVQRVPDTETQGRVHTSAASVVVLPEADE-FDVDIHVNDIRKDL 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ASG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQ KN  +A  +LR+++YE+ELQK 
Sbjct: 225 FCASGPGGQSVNTTYSAVRLTHLPTGIVAQCQDQKSQLKNYDKALQVLRSRIYEMELQKH 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E+  I +  KT +  G    +IR+Y   P   V + R  +   +  +V++G+L + M+A
Sbjct: 285 LEV--ISKKRKTMVSTGDRSAKIRTYNY-PQGRVTEHRIGLTIYNLPEVMNGNLLEIMEA 341


>gi|15611143|ref|NP_222794.1| peptide chain release factor 1 [Helicobacter pylori J99]
 gi|7388059|sp|Q9ZMZ0|RF1_HELPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4154581|gb|AAD05656.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Helicobacter pylori J99]
          Length = 352

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 175/299 (58%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K   +LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|47459025|ref|YP_015887.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
 gi|61214626|sp|Q6KIA0|RF1_MYCMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|47458353|gb|AAT27676.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
          Length = 358

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 183/331 (55%), Gaps = 21/331 (6%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE---LALEEDDCSILQETS 89
           P ++ N+ E   + +E    +N+IS I E  ++   N   ++   + L+E D  ++    
Sbjct: 26  PEVFNNIKEYTKISKE----NNSISEIVENFNKFLINEQTIKDAKILLDEKDEEMVSFAK 81

Query: 90  DNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           + +   K E+E ++ E       L   E D  +  +E+   AGG E+  +A  LL+MY +
Sbjct: 82  NEIH--KSELENQELEKKLRILILPKDENDERNVIIEIRGAAGGDEANIFAGDLLKMYNK 139

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WA+  K K + L+  +    G    T L++G  AY  LK E GVHR+ RI   ++  R H
Sbjct: 140 WADINKMKLKLLDYANASSGGFSQVTFLVEGDKAYSKLKFESGVHRVQRIPVTETQGRVH 199

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ V P VDD  E+EI+  D +IDT+R+SG GGQ VNTTDSAVRITH+P+G+VV  
Sbjct: 200 TSTTTVTVMPEVDDVAEVEINPVDLKIDTFRSSGPGGQSVNTTDSAVRITHLPSGIVVSS 259

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--QIRSYVLQPYQ 321
           Q E+SQ  N+  A  +L++KLY+LE++KR E    G+  K      R  +IR+Y   P  
Sbjct: 260 QDEKSQISNRESALKILKSKLYDLEIKKRNE--ETGKFRKLAGSGARSEKIRTYNY-PQD 316

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            + D R     TS    ++G +++ ++A  A
Sbjct: 317 RITDHRIGFS-TSLKIAMEGKINNIIEALHA 346


>gi|23012458|ref|ZP_00052537.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 361

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 146/242 (60%), Gaps = 8/242 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+ AG GG E+  +A  L RMY ++AE + ++ E +   +G   G +     
Sbjct: 108 ADEKSAILEIRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAE 167

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG + +  LK E G HR+ R+   ++  R HTS +++ V P  ++ +++ I+E+D +ID
Sbjct: 168 VKGRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEE-VDVVINEADLKID 226

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+RITH+PTGVVV  Q+ERSQHKN+A+A  +LRA+L++ E   
Sbjct: 227 TMRAQGAGGQHVNKTESAIRITHLPTGVVVFVQEERSQHKNRARAMALLRARLFDAERSA 286

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           ++  +      K ++G G    +IR+Y   P   V D R N+      +V+ G  LD+ +
Sbjct: 287 KD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVI 343

Query: 348 KA 349
            A
Sbjct: 344 DA 345


>gi|315077778|gb|EFT49829.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA2]
          Length = 361

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +RL  + T+  D  +  +      L +    L + +S    + D+L  ++   E  
Sbjct: 10  DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    L+  ++ L R +L++   +   LL  S   D  DA +E+H+G GG ES  +A
Sbjct: 69  TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191
             LLRMYTR+AE+  +    L     +  G ++  + + G P+  AYG+LK E GVHR+ 
Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302
           +TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+          E +  +R+++  +  S+
Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        +R+Y     ++  D R   +      +L GDL D + A
Sbjct: 305 R--------VRTYNFSENRLT-DHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|86134218|ref|ZP_01052800.1| peptide chain release factor 1 [Polaribacter sp. MED152]
 gi|85821081|gb|EAQ42228.1| peptide chain release factor 1 [Polaribacter sp. MED152]
          Length = 358

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 141/232 (60%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+ AG GG E+  +A  L RMYT++ E + +K   ++  +G   G K     +
Sbjct: 106 DAKNAVVELRAGTGGDEASIFAGDLFRMYTKYCESKGWKVSTVDYSEGTNGGFKEIQFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS ++  V+P  ++  ++EI+  D RID 
Sbjct: 166 NGDDVYGILKFEAGVHRVQRVPQTETQGRVHTSAATCMVFPEAEE-FDVEINPKDVRIDF 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKK 284

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +    +   S    G    +IR+Y     + V D R  +      ++++GD+
Sbjct: 285 QAEDALKRGSMVSSGDRSAKIRTYNYAQGR-VTDHRIGLSLYDLPNIMNGDI 335


>gi|319650894|ref|ZP_08005031.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
 gi|317397492|gb|EFV78193.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
          Length = 357

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 185/347 (53%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   +V+ R   LN    DP +  +  + +   +E+  +   +      KE++++  D
Sbjct: 1   MFDRLQSVEDRYERLNELLSDPEIVNDPKKLREYSKEQSGIQETVDTYREYKEVKEQYQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    L+  K ++E +    L+  +  D  +  +E+   AGG
Sbjct: 61  ARAMLEEKLDAEMREMVKEELAELEERKEDLEARLKILLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAETQGWKIDVIEASSTGVGGYKEIIFMINGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   +  K+ +G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQQRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       +L G LD+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALI 343


>gi|257785108|ref|YP_003180325.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
 gi|257473615|gb|ACV51734.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
          Length = 355

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 142/240 (59%), Gaps = 9/240 (3%)

Query: 107 LLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           L+ G+  D  D  +E+ AG GG E+  +A  L +MY R+AE R +KTE L     E  G 
Sbjct: 99  LIPGDPNDEKDTIVEIRAGVGGDEAAIFAGDLFKMYERFAEARGWKTEILSSSPSEAGGF 158

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+    + G   Y  +K E GVHR+ R+   +S  R  TS +++ V P  D+ I+I+I++
Sbjct: 159 KTIEFKVTGDKVYSVMKYESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDIQINQ 217

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTY ASG GGQ VNTT SAVRITH+PT  VVQ Q +RSQ +N+     MLRA+LY
Sbjct: 218 EDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLY 277

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           E+EL++++  A  G    ++IG G    +IR+Y  QP   V D R     T  + VL GD
Sbjct: 278 EMELERQQ--AEQGAERLSQIGHGARSEKIRTYN-QPQDRVTDHRVGFNGTY-NGVLLGD 333


>gi|256827314|ref|YP_003151273.1| peptide chain release factor 1 [Cryptobacterium curtum DSM 15641]
 gi|256583457|gb|ACU94591.1| bacterial peptide chain release factor 1 (bRF-1) [Cryptobacterium
           curtum DSM 15641]
          Length = 357

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 165/301 (54%), Gaps = 21/301 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLCDNLILLELALEEDD 81
           L T+  DP +  +  E   L +E  H       A +++++I D       L E      D
Sbjct: 17  LQTRMSDPAVISDQKEYNRLAKEYAHQGPLATAARTYVQDIDD-------LAEAKEMISD 69

Query: 82  CSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
             + +   + + RI+ E+    +  +F  + +  AD  D  +E+ AGAGG E+  +A  L
Sbjct: 70  ADMREFAQEEITRIENELPGLEDDIKFMLIPADPADDKDIIVEIRAGAGGDEAALFAGDL 129

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            +MY+ +A+ + +K E L     E  G K     +KG   Y  +K E GVHR+ R+   +
Sbjct: 130 FKMYSHFADVKGWKIEVLNASASEAGGYKEIQFKVKGDKVYSEMKFESGVHRVQRVPKTE 189

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P  D+ +E+++ + D RID YRA G GGQ VNTTDSAVRITH+PT
Sbjct: 190 SQGRIHTSTATVAVLPEADE-VEVDVKQEDLRIDVYRAGGPGGQCVNTTDSAVRITHLPT 248

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VVQ Q ++SQ +NK  A  +LRA+LYE  L+  E+ A  G   + +IG G    +IR+
Sbjct: 249 GLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLE--EQRAAEGAERRAQIGTGDRSEKIRT 306

Query: 315 Y 315
           Y
Sbjct: 307 Y 307


>gi|296199479|ref|XP_002747187.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Callithrix jacchus]
          Length = 382

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/246 (43%), Positives = 142/246 (57%), Gaps = 9/246 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY R+A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEMFDMYQRYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMKKLRAKLYSMH 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
           L+  EE      + K +IG  GR  +IR+Y   P   V D R +         + GD  L
Sbjct: 300 LE--EETNKRDNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRISKSLHDLQTFMQGDYLL 356

Query: 344 DDFMKA 349
           D+ +++
Sbjct: 357 DELVQS 362


>gi|319957818|ref|YP_004169081.1| bacterial peptide chain release factor 1 (brf-1) [Nitratifractor
           salsuginis DSM 16511]
 gi|319420222|gb|ADV47332.1| bacterial peptide chain release factor 1 (bRF-1) [Nitratifractor
           salsuginis DSM 16511]
          Length = 355

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 28/305 (9%)

Query: 61  EIQDRLCDNLILL------ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
           EI + + +N  +L      ELA EE     L E    L R++ E++      +L    D 
Sbjct: 54  EISEAIEENKAMLSDPEFGELAKEE-----LSELEPQLPRLEEEIK------VLMIPKDP 102

Query: 115 ND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           ND    YLE+ AGAGG ES  +   + +MY R+AE++ +K E +   +G   G K    L
Sbjct: 103 NDDKNIYLELRAGAGGDESALFVEDMFKMYLRFAERQGWKVEIVSSSEGTAGGYKELIAL 162

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG   Y  LK E G HR+ R+   ++  R HTS  ++ V P V+D +EI+I  ++ ++D
Sbjct: 163 VKGEGVYSKLKFEAGTHRVQRVPATETQGRVHTSAITVAVIPEVED-VEIDIKPNEIKMD 221

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SG GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQHKN+ +A  +L+A+++E  +  
Sbjct: 222 VYRSSGCGGQSVNTTDSAVRLTHLPTGIVVAIQDEKSQHKNRDKAMKVLKARVHEAMM-- 279

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347
           RE++       K ++G G    +IR+Y   P   + D R  +   +  DV+ +G L+  +
Sbjct: 280 REQMEETAGQRKLQVGSGDRSEKIRTYNY-PQNRITDHRIGLTLYALDDVMNNGTLEQVI 338

Query: 348 KATLA 352
              +A
Sbjct: 339 DPLIA 343


>gi|21223720|ref|NP_629499.1| peptide chain release factor 1 [Streptomyces coelicolor A3(2)]
 gi|256785187|ref|ZP_05523618.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|289769080|ref|ZP_06528458.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|20139352|sp|Q9K4E4|RF1_STRCO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|8568782|emb|CAB94531.1| peptide chain release factor 1 (RF-1) [Streptomyces coelicolor
           A3(2)]
 gi|289699279|gb|EFD66708.1| peptide chain release factor 1 [Streptomyces lividans TK24]
          Length = 358

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 146/251 (58%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERIGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ I++
Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E+ A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAEKEAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDSVIQACV 347


>gi|86609051|ref|YP_477813.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|119361626|sp|Q2JL68|RF1_SYNJB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86557593|gb|ABD02550.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 360

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L RMYTR+AEK  +      + +GE  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGEEAALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS +++ V P VD+ +E+ I   D  I T
Sbjct: 172 QGDQVYSKLKFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDE-VEVVIDPKDIEIKT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++LQ  
Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQ-- 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A+I  + + ++G G    +IR+Y  +  + V D R N +      +LDG+LDD ++A
Sbjct: 289 EQQASISSARRMQVGTGSRSEKIRTYNYKDNR-VTDHRLN-QNFPLQPILDGELDDLIQA 346

Query: 350 TLAI 353
            + +
Sbjct: 347 CIGL 350


>gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4]
 gi|189039974|sp|A5G8T7|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           uraniireducens Rf4]
          Length = 355

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 7/237 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+    LE+ AG GG E+  +A  L RMY R+AE  +++ E +   + E+ G K     +
Sbjct: 103 DNKSVILEIRAGTGGDEAALFAGDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASV 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   +  LK E G HR+ R+   ++  R HTS  ++ + P  +D ++I+I+ +D +ID 
Sbjct: 163 EGDGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAIMPEAED-VDIDINPADLKIDV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ERSQ KN+A+A  +L+ ++ +  +Q  
Sbjct: 222 YRSSGAGGQHVNTTDSAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIMQ-- 279

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           E+ A +    K ++G G    +IR+Y   P   + D R  +       ++ GD+ + 
Sbjct: 280 EQSARLAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEI 335


>gi|302759765|ref|XP_002963305.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
 gi|300168573|gb|EFJ35176.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
          Length = 927

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/313 (37%), Positives = 176/313 (56%), Gaps = 27/313 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQ 103
           + +E + LD ++  IK ++ +  + + L EL  E  +D  + +  S  LQ    EV   Q
Sbjct: 51  MNKELRKLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQ 110

Query: 104 FESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
            + LL      EADS         GAGG E+  +A+ L +MY ++     ++ E L I  
Sbjct: 111 HDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYEKYTANNSWRFEVLSITT 162

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            +  G K A+ +I G   YG LK E GVHR+ R+   +   R HTS +S+ + P  ++ +
Sbjct: 163 TDTRGYKEASAVISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-V 221

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQHKNKA+A ++
Sbjct: 222 DVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSI 281

Query: 280 LRAKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           L A+LYELE  +    R E+    IG S ++E     +IR+Y   P   V D +  + + 
Sbjct: 282 LYARLYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHQVGVTQH 335

Query: 334 SPSDVLDG-DLDD 345
           +   +++G D+D+
Sbjct: 336 AIEQIMEGIDVDN 348


>gi|297585440|ref|YP_003701220.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
 gi|297143897|gb|ADI00655.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
          Length = 356

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +EV   AGG E+  +A  L RMY R+AE + +KT+ +E  +    G K     I
Sbjct: 106 DDKNVIVEVRGAAGGDEAALFAGDLYRMYHRYAESQGWKTDVIEASETGIGGYKEIVFTI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ R+   +S  R HTS +++ V P  +D +E++ISE D R+D 
Sbjct: 166 NGTGAYSKMKFENGAHRVQRVPATESGGRIHTSTATVAVLPEAED-VEVDISEKDIRVDR 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH PTG+VV CQ E+SQ KNK +A  +LRA++Y  +  +R
Sbjct: 225 FASSGPGGQSVNTTMSAVRLTHEPTGIVVSCQDEKSQIKNKEKAMKVLRARIY--DKYQR 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A   E+ K+ +G G    +IR+Y   P   V D R  +       +L+G LD+ ++A
Sbjct: 283 EAQAEYDENRKSAVGTGDRSERIRTYNF-PQSRVTDHRIGLTIQKLDQILEGKLDEIIEA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|317179883|dbj|BAJ57669.1| peptide chain release factor 1 [Helicobacter pylori F32]
          Length = 352

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|297568589|ref|YP_003689933.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
 gi|296924504|gb|ADH85314.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
          Length = 357

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 146/242 (60%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +   L RMY+R+AE+  +K E L  +     G K    LI
Sbjct: 106 DEKNVLLEIRAGTGGDEAALFVADLFRMYSRYAEQLGWKVETLSSNPIGIGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E GVHR+ R+   ++  R HTS  ++ V P  ++ +E++I+ S+ + D 
Sbjct: 166 SGEHVYSRLKYESGVHRVQRVPATETQGRVHTSAVTVAVLPEAEE-VELKINPSELKFDV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++
Sbjct: 225 FRSSGPGGQSVNTTDSAVRVTHLPTGLVVSCQDEKSQHKNKAKALQVLRARL--LDKLQQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   I    K+++G G    ++R+Y   P   + + R N+      DV+ G LD+ ++ 
Sbjct: 283 EQHDQISSDRKSQVGSGDRSERVRTYNF-PQNRLTEHRINLTIYRLDDVMMGHLDEVVEP 341

Query: 350 TL 351
            +
Sbjct: 342 LM 343


>gi|184200614|ref|YP_001854821.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
 gi|238689221|sp|B2GLX4|RF1_KOCRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183580844|dbj|BAG29315.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
          Length = 369

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/248 (41%), Positives = 144/248 (58%), Gaps = 8/248 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LEV AG GG ES  +A  LLRMY R+AE+   KTE L     E  G K   L +
Sbjct: 100 DGRNVILEVKAGEGGDESALFAGDLLRMYMRFAEQSGLKTEILSSTPTELGGYKDVQLAV 159

Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG    P+   W   K E GVHR+ R+   +S  R HTS + + V+P VD+  EI+IS++
Sbjct: 160 KGSSSDPSEGAWARFKYEGGVHRVQRVPVTESQGRVHTSAAGVLVFPEVDEPDEIDISQN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+  A  +LRA+L  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREAAMRVLRARLLA 279

Query: 287 LELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            + ++ + E A   +S    +    +IR+Y   P   + D RT  +  +   VLDG L+ 
Sbjct: 280 HQQEQIDAENAAARKSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDHVLDGALEP 338

Query: 346 FMKATLAI 353
            + + + +
Sbjct: 339 VIASAVEL 346


>gi|163846084|ref|YP_001634128.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222523819|ref|YP_002568289.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
 gi|189039962|sp|A9WE79|RF1_CHLAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790872|sp|B9LJ02|RF1_CHLSY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163667373|gb|ABY33739.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222447698|gb|ACM51964.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
          Length = 360

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 189/358 (52%), Gaps = 32/358 (8%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   AV  R   L      P +  NV   +   RE++ +++ ++  +E Q        
Sbjct: 1   MFDKLAAVAARYDELTELMAQPEVATNVTLLQQYAREQREIEDIVNAYREYQ-------- 52

Query: 72  LLELALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEA---------DSNDAYL 119
             + A+EE + ++L+++   L+ +   +LE + K+  SL              DS D  +
Sbjct: 53  ATQRAIEEAE-AMLEDSDPELRALAQEELETQRKRLASLEEQLKLLLLPRDPNDSKDVIM 111

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+  G GG E+  +A  L RMYTR+AE R +K E   + +    GIK     I G  AY 
Sbjct: 112 EIRQGEGGDEAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYS 171

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHR+ R+   ++  R HTS +++ V P V+++ EIEI   D RID +R++G G
Sbjct: 172 QLKYEGGVHRVQRVPATEARGRIHTSTATVAVLPEVEET-EIEIKPEDLRIDVFRSAGHG 230

Query: 240 GQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GQ VNTTDSAVRI +    P  +VV CQ  RSQ +N+ +A  +LRA+LY  E +KR+   
Sbjct: 231 GQGVNTTDSAVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQR-- 288

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IG S   ++G G    +IR+Y   P   + D R     ++   VLDG+LD  ++A +
Sbjct: 289 EIGASRLAQVGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALI 345


>gi|292620387|ref|XP_002664272.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Danio rerio]
 gi|220679232|emb|CAX12803.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 431

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 156/266 (58%), Gaps = 19/266 (7%)

Query: 59  IKEIQDRLCDN-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSN 115
           ++++QD L DN   LLELA E +  ++L +  D  Q+I          SLL    E+D +
Sbjct: 127 MEDMQDLLKDNDPELLELA-ETEKEAVLADIQDLRQKIL---------SLLIPEEESDMS 176

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +  LEV AG GG E+  +   +  MY  +A    +  + LE +  E  G++ A+  + GP
Sbjct: 177 ELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGP 236

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            +Y  LK E GVHR+ R+   +S  R HTS  ++ + P   + I   I+  D +I+T RA
Sbjct: 237 LSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTE-ISFTINPKDLKIETKRA 295

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PTG V +CQQERSQ KNK  A  +LRAKLY   L+  EE 
Sbjct: 296 SGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLE--EET 353

Query: 296 ANIGESSKTEIGW-GR--QIRSYVLQ 318
           +   ++ K +IG  GR  +IR+Y  Q
Sbjct: 354 SRRYQARKLQIGTRGRSEKIRTYNFQ 379


>gi|300088066|ref|YP_003758588.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527799|gb|ADJ26267.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 356

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 189/329 (57%), Gaps = 19/329 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSD 90
           DP +  ++     L +ER  ++  I   +  + R   +L   E  LE E D  + +   +
Sbjct: 21  DPSVATDITLLTRLAKERASMEALIGMYRRYK-RNEQSLTEAEQMLETETDEEMRELAKE 79

Query: 91  NLQRIKLEVE--YKQFE-SLLSGEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
            ++R+K E E  Y+Q + +LL  + ++  +  +E+ AG GG E++ +A  L RMYTR+AE
Sbjct: 80  EVKRLKQEQEELYEQLKIALLPKDPNAERNIIIEIRAGTGGDEAKLFAGDLFRMYTRYAE 139

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K E +++ +      K A   I G + Y  LK E GVHR+ R+   +++ R HTS 
Sbjct: 140 LKGWKVEIIDLTEQSGGTFKEAVFEIDGEDVYSRLKYESGVHRVQRVPVTEASGRIHTST 199

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V PV +D IE++I   D RID Y + GAGGQ+VN   +AVR+TH+P+G+VV CQ+E
Sbjct: 200 ATVAVMPVAED-IEVDIKPEDLRIDIYHSGGAGGQNVNKVATAVRMTHLPSGLVVACQEE 258

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPY 320
           RSQ KN+ +A ++L+A+L  +E +K+++       A +G + ++E     +IR+Y   P 
Sbjct: 259 RSQLKNRQKAMSVLKARLLAMEQEKQDKEMTDNRRAQVGSADRSE-----KIRTYNY-PQ 312

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             + D R  +   +   +++G LDD + A
Sbjct: 313 DRLTDHRIGLSVHNLPKIMEGYLDDIIDA 341


>gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium sp. P08]
          Length = 361

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMYTR+AE+  + 
Sbjct: 83  RGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYTRYAERVGWS 142

Query: 152 TEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P+  AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 143 VRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 202

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  +D R+D YR+SG GGQ VNTTDSAVR+TH+PTG+V  CQ ERS
Sbjct: 203 VLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERS 261

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 262 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 312

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL + + A
Sbjct: 313 ENRLTDHRIGYKSRKLDQILAGDLGEVLDA 342


>gi|91217382|ref|ZP_01254342.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
 gi|91184490|gb|EAS70873.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
          Length = 358

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 147/236 (62%), Gaps = 3/236 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +EV AGAGG E+  +A  + RM +++ E + +K + ++ ++G   G K     +
Sbjct: 106 DAKNAVVEVRAGAGGDEASIFAGDIFRMLSKYCEHKGWKVDVVDYNEGTNGGYKEIQFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +++ V+P  ++  +IE++  + R+D 
Sbjct: 166 SGDDVYGTLKYEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDIEVNPKEVRVDY 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGIVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKK 284

Query: 293 E-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E A    S  T      +IR+Y     + V D R N+      ++++GDL+  +
Sbjct: 285 QAEDAEKRGSMVTSGDRSAKIRTYNYSQSR-VTDHRINLTLYDLDNIINGDLEKII 339


>gi|22331914|ref|NP_191850.2| APG3 (ALBINO AND PALE GREEN); translation release factor/
           translation release factor, codon specific [Arabidopsis
           thaliana]
 gi|19699096|gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|21928033|gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|34392768|dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana]
 gi|332646889|gb|AEE80410.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 422

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 192/339 (56%), Gaps = 15/339 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82
           L+ K  DP +  N  E + L +    LD  ++  +  +D   +L ++ +L + A +++D 
Sbjct: 71  LSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDM 130

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           + +  +  N    ++E   KQ + LL  S   D+ +  LEV AG GG E+  W   L+RM
Sbjct: 131 AEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRM 190

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R++E+  +K   +   + E  G K+  + IKG   Y  LK E GVHR+ R+   ++  
Sbjct: 191 YQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQG 250

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ + P  D+ +E+ I   D  + + R+ GAGGQ+VN  ++A+ + H P+G+ 
Sbjct: 251 RVHTSTATVAIMPEADE-VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIR 309

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           + C +ER+Q +NKA+A+ +LRAKLYE+++++++E   I    K+++G G    +IR+Y  
Sbjct: 310 IFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERKSQVGTGARSEKIRTYNY 367

Query: 318 QPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +  ++    L+ N   T+    LDG L+D ++A  A+++
Sbjct: 368 KDSRVTDHRLKMNFALTT---FLDGALEDAVQACAALEQ 403


>gi|149744102|ref|XP_001501636.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Equus caballus]
          Length = 380

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/224 (45%), Positives = 134/224 (59%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E + ND  LEV AG GG E+  + + +  MY R+A  +++  E LE    E  G++ A
Sbjct: 121 SEETNENDLILEVTAGVGGQEAMLFTSEIFDMYQRYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMH 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           ++  EE +    + K +IG  GR  +IR+Y   P   V D R N
Sbjct: 300 VE--EETSKRYNARKVQIGTKGRSEKIRTYNF-PQNRVTDHRIN 340


>gi|323490903|ref|ZP_08096098.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
 gi|323395383|gb|EGA88234.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
          Length = 359

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 184/347 (53%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   +V+ R   LN    DP +  +  + +   +E+  L   +   +E +D   +L +
Sbjct: 1   MFDRLQSVEDRYDRLNELLSDPDIVSDTNKLRDYSKEQSDLQETVETYREYKDLTTQLTE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              + +  ++ D   +++E  + L++    VE +  + L+  +  D  +  +E+   AGG
Sbjct: 61  AKAMFDEKMDADMREMVKEEVNELEQQVSVVEERLHKLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE   +K + ++ +     G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAGDLYRMYTRFAESNGWKIQVMDSNPTGLGGFKEIVFMITGKGAYSKMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V++ +E++I E+D R DTY +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEVEE-VEVDIHENDIRTDTYASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PT  VV CQ E+SQ KNKA A  +LRA++YE   Q  E  A      K+ +G
Sbjct: 240 SAVRLTHLPTNTVVTCQDEKSQIKNKASAMKVLRARVYEKFQQ--EAQAEYDAVRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       +L G +D+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKMDEIVDALI 343


>gi|256825643|ref|YP_003149603.1| peptide chain release factor 1 [Kytococcus sedentarius DSM 20547]
 gi|256689036|gb|ACV06838.1| bacterial peptide chain release factor 1 (bRF-1) [Kytococcus
           sedentarius DSM 20547]
          Length = 357

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 142/242 (58%), Gaps = 9/242 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---- 174
           LEV AG GG ES  +A+ L+RMY R AE+R +    LE    +  G+K A + I+     
Sbjct: 106 LEVKAGEGGQESALFAHELVRMYLRHAERRGWAATVLESTASDLGGVKDARVAIRARGAG 165

Query: 175 -PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
            P    W  LK E GVHR+ R+   +S  R HTS   + V P VDD  E+EI+ +D ++D
Sbjct: 166 EPGDAPWARLKFEGGVHRVQRVPVTESQGRIHTSAVGVLVLPEVDDPGEVEIAPADLKVD 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SG GGQ VNTTDSAVR+TH+PTGVVV CQ E+SQ +NK  A  +L ++L  + L++
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKEAALRVLASRLRRMALEE 285

Query: 292 RE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            + E++    +    +    ++R+Y   P   V D RT  +  +   VLDGDLD  + + 
Sbjct: 286 AQAEVSQARRAQVRTVDRSERVRTYNF-PESRVSDHRTGYKAHNLPAVLDGDLDAVIDSL 344

Query: 351 LA 352
           +A
Sbjct: 345 VA 346


>gi|297679452|ref|XP_002817544.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 1 [Pongo abelii]
          Length = 380

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/245 (44%), Positives = 139/245 (56%), Gaps = 17/245 (6%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRQA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299

Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           L+    KR+    I   SK   G   +IR+Y   P   V D R N  KT        DL+
Sbjct: 300 LEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRIN--KTL------HDLE 347

Query: 345 DFMKA 349
            FM+ 
Sbjct: 348 TFMRG 352


>gi|316932075|ref|YP_004107057.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
 gi|315599789|gb|ADU42324.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
          Length = 361

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/296 (37%), Positives = 167/296 (56%), Gaps = 9/296 (3%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSG 110
           L  A+   ++++D L +   LLE    E +   + E   D L   + E+  +   +LL  
Sbjct: 45  LVEAVKSYRQVRDELGEIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPK 104

Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           +A D  +  LE+ AG GG E+  +A  L RMY ++A  + +  E +   +G   G K   
Sbjct: 105 DAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEII 164

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V+D ++++I + D R
Sbjct: 165 AEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVED-VDVDIKQEDLR 223

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           I+T RA GAGGQHVN T+SA+RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E 
Sbjct: 224 IETMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAER 283

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           Q R + A   E  K ++G G    +IR+Y   P   V D R N+       V+ G+
Sbjct: 284 Q-RVDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 336


>gi|291527966|emb|CBK93552.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale M104/1]
          Length = 358

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 180/328 (54%), Gaps = 11/328 (3%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEEDDCSIL-QE 87
           +P +  +    K LM+E+  L   +   K   E +  + D+L +L+   +E+   +  +E
Sbjct: 21  EPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIEDSLAILDEESDEEMRELAKEE 80

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             D+ ++++   +  +   L     D  +  +E+ AGAGG E+  +A  + RMY  +AE 
Sbjct: 81  LKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGGEEAALFAAEIYRMYVHYAEN 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R +K E L+  +    G+KS   ++KG  AY  LK E GVHR+ R+   +S  R  TS  
Sbjct: 141 RGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVHRVQRVPETESQGRIQTSTC 200

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P  +D       +   RID  RASG GGQ VNTTDSAVR+TH P+G+V+  Q E+
Sbjct: 201 SVAVMPEAEDVDVKIDDKDI-RIDVMRASGNGGQCVNTTDSAVRLTHYPSGIVIYSQTEK 259

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQ +NK +A+ +LR KLY++ELQK+++     E  +++IG G    +IR+Y   P   V 
Sbjct: 260 SQIQNKEKAFALLRTKLYDMELQKKQDAE--AEERRSQIGTGDRAEKIRTYNF-PQGRVT 316

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           D R N+       +L+GD+ + + A +A
Sbjct: 317 DHRINLTLYKLDKILNGDIQEIIDACIA 344


>gi|254387523|ref|ZP_05002762.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294815090|ref|ZP_06773733.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|326443452|ref|ZP_08218186.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|197701249|gb|EDY47061.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294327689|gb|EFG09332.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
          Length = 356

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/248 (41%), Positives = 145/248 (58%), Gaps = 10/248 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LEV AGAGG ES  +A  LLRMY R+AE+  +KTE +   + E  G K   + 
Sbjct: 99  SDDKDVILEVKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIINSTESELGGYKDVQVA 158

Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ I++EI+
Sbjct: 159 VKTKGNAEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDVEIN 217

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L
Sbjct: 218 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRL 277

Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
                ++ E+ A     S+   +    +IR+Y   P   + D R   +  +   VLDGDL
Sbjct: 278 LAAAQEEAEKEAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDL 336

Query: 344 DDFMKATL 351
           D  ++A +
Sbjct: 337 DAVIQACV 344


>gi|320109111|ref|YP_004184701.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
 gi|319927632|gb|ADV84707.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
          Length = 355

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 166/298 (55%), Gaps = 11/298 (3%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
            KE+ + + D   +L    + D   + +E    L   K E+E +    LL  +  DS + 
Sbjct: 51  FKEVMNGIADAHTML---ADPDMKEMAEEELSTLMPRKTEIEEELKIMLLPKDPNDSKNV 107

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LE+ AG GG E+  +A  + RMY R+AE+ ++K E L   +G   G+K  T + +G   
Sbjct: 108 VLEIRAGTGGDEAALFAEEMFRMYLRFAEQHRWKVEVLSEREGAVGGMKEVTAIFEGDQV 167

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E GVHR+ R+   ++  R HTS  ++ V P  ++ ++++I   D RIDT+ +SG
Sbjct: 168 YSQLKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEE-VDVKIEAKDLRIDTFCSSG 226

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTT SA+RITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+E+++  ++  
Sbjct: 227 PGGQSVNTTYSAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERVHQLQ- 285

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              + K ++G G    +IR+Y   P   + D R  +       V++G L   + A +A
Sbjct: 286 -ATARKAQVGSGDRSEKIRTYNF-PQNRLTDHRIGLTLHQLEYVMEGKLQPVVDALIA 341


>gi|27375329|ref|NP_766858.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
 gi|32171530|sp|Q89XT9|RF1_BRAJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27348465|dbj|BAC45483.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
          Length = 361

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 144/241 (59%), Gaps = 8/241 (3%)

Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           +LL  +A D  +  LE+ AG GG E+  +A  L RMY R+A  + +K E +   +G   G
Sbjct: 100 ALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGG 159

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V P V+D ++++I 
Sbjct: 160 YKEIIAEVQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVED-VDVDIK 218

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV  Q  RSQHKN+A A N+LR+++
Sbjct: 219 NDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRI 278

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E Q R + A   E  K ++G G    +IR+Y   P   V D R N+       V+ G
Sbjct: 279 YDAERQ-RVDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAG 335

Query: 342 D 342
           +
Sbjct: 336 E 336


>gi|302842492|ref|XP_002952789.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
 gi|300261829|gb|EFJ46039.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
          Length = 415

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 152/244 (62%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AGAGG E+  WA  ++RMY R+A ++ +K   +    GE  G K   L I
Sbjct: 161 DDRNIMLEIRAGAGGDEASIWAGDMMRMYQRYANRQGWKASLVSCTQGESGGYKEVILEI 220

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E GVHR+ R+   ++  R HTS +++ V P V+D ++++I+ S+  +  
Sbjct: 221 SGTSVYSKLKWEAGVHRVQRVPATEAAGRVHTSTATVAVMPEVED-VDVQINPSEIEVKF 279

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQ+VN  ++AV + H PTG+ V CQ+ER+Q +NK +A+ +LRAKLYE+E+Q++
Sbjct: 280 ARASGAGGQNVNKVETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYEMEIQRQ 339

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP----SDVLDGDLDDFMK 348
           +  A I  + K+++G G   RS  ++ Y   KD R +  +       + VL+GDL+D ++
Sbjct: 340 Q--AEIYAARKSQVGTGD--RSEKIKTYNY-KDSRVSDHRIKQNFDLNSVLEGDLEDSLQ 394

Query: 349 ATLA 352
           A ++
Sbjct: 395 AMIS 398


>gi|194468250|ref|ZP_03074236.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
 gi|194453103|gb|EDX42001.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
          Length = 362

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 187/348 (53%), Gaps = 14/348 (4%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68
           +FD   AV  R   LN    DP +  +        +E   L   +   +  K++   + D
Sbjct: 6   IFDKLQAVADRYDELNELISDPEVIADSQRFMKFSKEEGSLRETVEKYNQYKKVTQTISD 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
           +  LL    ++D  ++ +E     +  + ++E K+ E LL      D  +  +E+   AG
Sbjct: 66  DEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIRGAAG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK E G
Sbjct: 125 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  +D ++++I   D R+D YR+SGAGGQHVN T
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   Q++E+ A   +  K  I
Sbjct: 244 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY-YQQQEQSA-YDQKRKDAI 301

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +
Sbjct: 302 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALI 348


>gi|242280071|ref|YP_002992200.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
 gi|259585219|sp|C6BYQ4|RF1_DESAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|242122965|gb|ACS80661.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
          Length = 357

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 143/243 (58%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMY+R+AE   +K E +  +     G K     I
Sbjct: 105 DGKNIILEIRAGTGGEEAALFAADLFRMYSRFAESNGWKVEVMNSNPTGTGGFKEIIAAI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  +K E G HR+ R+   ++  R HTS +++ + P  ++ +++++   D RID 
Sbjct: 165 SGSRIYSMMKYESGTHRVQRVPATETQGRIHTSAATVAIMPEAEE-VDVQVRNEDLRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASG GGQ VNTTDSA+RITH+PTG+VV CQ E+SQHKNKA+A  +L ++L + E  K+
Sbjct: 224 FRASGPGGQSVNTTDSAIRITHLPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQAEQDKQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              A + E  + ++G G    +IR+Y   P   V D R N+       V++GD+ + +++
Sbjct: 284 H--AEMAEQRRAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDAVIEGDMQELVES 340

Query: 350 TLA 352
            ++
Sbjct: 341 LIS 343


>gi|114609863|ref|XP_518818.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 6 [Pan troglodytes]
          Length = 380

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 140/247 (56%), Gaps = 11/247 (4%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299

Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342
           L+    KR+    I   SK   G   +IR+Y   P   V D R N         + GD  
Sbjct: 300 LEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYL 355

Query: 343 LDDFMKA 349
           LD+ +++
Sbjct: 356 LDELVQS 362


>gi|119383645|ref|YP_914701.1| peptide chain release factor 1 [Paracoccus denitrificans PD1222]
 gi|166223583|sp|A1B0G1|RF1_PARDP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119373412|gb|ABL69005.1| bacterial peptide chain release factor 1 (bRF-1) [Paracoccus
           denitrificans PD1222]
          Length = 351

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD+  A LE+  G GG E+  +A  LL MY R+AE + ++ + LE+   +  G++ A   
Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLDMYRRFAESQGWQFQMLELVRSDLGGVREAMAR 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++++I  +D RID
Sbjct: 161 IEGEGVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEE-VDVDIPAADIRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+A A  +LRA+LY++E  +
Sbjct: 220 TMRASGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRANAMAVLRARLYDMERSR 278

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  A      K+++G G    +IR+Y   P   + D R  +   +   ++ G++ + ++
Sbjct: 279 AD--AERAADRKSQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYALDRIMQGEIGEIVE 335

Query: 349 ATLA 352
           A  A
Sbjct: 336 ALAA 339


>gi|328954736|ref|YP_004372069.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
 gi|328455060|gb|AEB06254.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
          Length = 355

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/326 (37%), Positives = 174/326 (53%), Gaps = 16/326 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
           L  K  DP +  +  E   L +E  +  + ++  +       D     E+  EE D    
Sbjct: 15  LEKKLSDPAVMGDQKEYTRLAKEHANQADLVAMARAYVTAYDDIEAAKEMLHEETDAQSK 74

Query: 84  --ILQETSDNLQRIK-LEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139
             +L + S+N  +I  LE E K    L+ G+  D  +  +E+ + AGG E+  +A  L +
Sbjct: 75  AMLLADISENEAKIPGLENEIKVM--LIPGDPNDEKNTIMEIRSAAGGDEAAIFAGDLFK 132

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E  ++K E L     E  G KS    + G   Y  +K E GVHR+ RI   +S 
Sbjct: 133 MYERFFEAHRWKMELLSASPSEAGGFKSIEFKVSGDKVYSLMKYESGVHRVQRIPKTESQ 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R  TS +++ V P  D+ I+I+I + D RIDTY ASG GGQ VNTT SAVRITH+PT  
Sbjct: 193 GRIQTSTATVAVLPEADE-IDIKIDQGDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNT 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VVQ Q++RSQ +N+     MLRA+LYE EL++++  A +G   +++IG G    +IR+Y 
Sbjct: 252 VVQSQEQRSQIQNREVCMQMLRARLYERELEQQQ--AELGAERQSQIGRGNRSEKIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD 342
            QP   V D R     T  + VL GD
Sbjct: 310 -QPQDRVTDHRIGFSSTY-NGVLLGD 333


>gi|94271210|ref|ZP_01291905.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93450530|gb|EAT01680.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 185/337 (54%), Gaps = 19/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQH---LDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  +  DP +  +    + L +E  H   L+   +  ++  D L  N  LL+   EEDD 
Sbjct: 15  LEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANGQLLQ---EEDDP 71

Query: 83  SIL----QETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            IL    QE  +  QR+ +L+ E +    +     D  +  LE+ AG GG E+  +   L
Sbjct: 72  EILELARQEGEELRQRLAQLDKELR-LALVPPDPNDEKNILLEIRAGTGGDEASLFVANL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+AE+  +K E L     E  G K    LI G + +  LK E GVHR+ R+   +
Sbjct: 131 FRMYSRYAEQLGWKVEVLSSSTTEVGGYKEIIALISGDHVFSRLKYESGVHRVQRVPETE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS  ++ V P  ++ +E+ I+ ++ + D +R+SG GGQ VNTTDSAVR+TH+PT
Sbjct: 191 TQGRVHTSAVTVAVLPEAEE-VELSINPAELKYDVFRSSGPGGQSVNTTDSAVRVTHLPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++++   +    K+++G G    +IR+
Sbjct: 250 GLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVGSGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   + D R N+      DV+ G LD+ ++  +
Sbjct: 308 YNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPLM 343


>gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
          Length = 388

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMYTR+AE+  + 
Sbjct: 110 RGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYTRYAERVGWS 169

Query: 152 TEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P+  AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 170 VRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 229

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  +D R+D YR+SG GGQ VNTTDSAVR+TH+PTG+V  CQ ERS
Sbjct: 230 VLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERS 288

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 289 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 339

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL + + A
Sbjct: 340 ENRLTDHRIGYKSRKLDQILAGDLGEVLDA 369


>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
 gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
          Length = 386

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 191/355 (53%), Gaps = 12/355 (3%)

Query: 6   QLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           Q + +  +F+  D  + R   L     DP +  +      L +E   + + ++  K+ + 
Sbjct: 24  QEDFMDKIFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQ 83

Query: 65  RLCD---NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLE 120
            L D   +  +L  + +ED  ++ +E  ++LQ+ K ++E K    +L  +  D  +  +E
Sbjct: 84  VLSDIKESEEVLRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIME 143

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +   AGG E+  +A  LL MY  +AE++ +K E ++    E  G K   ++I G N Y  
Sbjct: 144 IRGAAGGDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSK 203

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E G HR+ R+   +S  R HTS +++ V P  D+ ++++I   D R D YR+SGAGG
Sbjct: 204 LKYENGAHRVQRVPVTESAGRVHTSTATVGVMPEYDE-VDLKIDPKDIRTDVYRSSGAGG 262

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T SAVR+THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y+    + +E     +
Sbjct: 263 QHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQ 320

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + K  IG G    +IR+Y   P   V D R  +       +++G+LD+ + A + 
Sbjct: 321 NRKNAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 374


>gi|289812362|ref|ZP_06542991.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 288

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 82/161 (50%), Positives = 111/161 (68%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 128 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 187

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT
Sbjct: 188 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 247

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNK
Sbjct: 248 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNK 288


>gi|281345517|gb|EFB21101.1| hypothetical protein PANDA_018665 [Ailuropoda melanoleuca]
          Length = 379

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D+ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ V P   + I + I+  D 
Sbjct: 181 SASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE +    + K ++G  GR  +IR+Y   P   V D R N
Sbjct: 300 LE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRIN 340


>gi|302759937|ref|XP_002963391.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
 gi|300168659|gb|EFJ35262.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
          Length = 412

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 194/354 (54%), Gaps = 28/354 (7%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--RLCDNLI--- 71
           D+A Q    L  K  DP +  +  E + L +    ++  ++  ++ ++  R  D+L    
Sbjct: 60  DSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEMI 119

Query: 72  -------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
                  L E+A+EE   +IL+E   NL+      EY +   L S   DS +  LEV AG
Sbjct: 120 KSSGDKELAEMAVEES--AILKENITNLE------EYLKVLLLPSDPLDSRNIMLEVRAG 171

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  WA  L+RMY ++AE+ ++    +   + E+ G K   L I G   Y  LK E
Sbjct: 172 TGGDEAGIWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYE 231

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +++ + P VD+ +E+ I   D  + T R+ GAGGQ+VN
Sbjct: 232 SGVHRVQRVPATESQGRVHTSTATVAIMPEVDE-VEVVIDPKDIELTTARSGGAGGQNVN 290

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
             ++AV + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E   I    ++
Sbjct: 291 KVETAVDLFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRS 348

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++G G    +IR+Y  +  + V D RT I     S  L G+++  ++A  A+++
Sbjct: 349 QVGTGARSEKIRTYNYKDNR-VSDHRTKINFDLDS-FLSGNIESAVQACAAVEQ 400


>gi|295134987|ref|YP_003585663.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
 gi|294983002|gb|ADF53467.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
          Length = 358

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 139/232 (59%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E+  +A  L RMYT++ E + +    ++  +G   G K     +
Sbjct: 106 DAKNVVMEIRAGTGGDEASIFAGDLYRMYTKYVESKGWSHNIVDFSEGTSGGFKEMIFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG +K E GVHR+ R+   ++  R HTS +++ V P  ++  ++EI   D RID 
Sbjct: 166 SGEDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVEIDPKDVRIDY 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKN+ +A+ +LR++LYE+EL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNREKAFRVLRSRLYEIELAKK 284

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            E      +S    G    +IR+Y   P   V D R N+     S++++GD+
Sbjct: 285 MEADAAKRNSMVSSGDRSAKIRTYNY-PQGRVTDHRINLTLYDLSNIVNGDI 335


>gi|313899685|ref|ZP_07833188.1| peptide chain release factor 1 [Clostridium sp. HGF2]
 gi|312955300|gb|EFR36965.1| peptide chain release factor 1 [Clostridium sp. HGF2]
          Length = 357

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 18/291 (6%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---------YKQFESLL--SGEADSNDAYLEVHAG 124
           ALE+    +L++  +  +  K+E+E          ++ E LL      DS++A +E+   
Sbjct: 60  ALEDAKALLLEDDKEIKEMAKMEIEELEPKIEEYLEKLEILLIPKDPNDSHNAIVEIRGA 119

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E   +A  L RMY+++AE + +K E +E+ D E  G    + ++KG   YG LK E
Sbjct: 120 AGGDEGNIFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFE 179

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P ++   + +I  +D  ++T RASGAGGQH+N
Sbjct: 180 SGSHRVQRVPKTESQGRIHTSTATVLVTPEIEPE-DFDIDMNDLEMETMRASGAGGQHIN 238

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRI H PTG+ V+CQ  RSQH+N+A A   +R+++YE   +K EE   I   +K 
Sbjct: 239 KTDSAVRIVHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGIERRNK- 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            IG G    +IR+Y   P   V D R          +++G + D + A L+
Sbjct: 298 -IGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLS 346


>gi|301786516|ref|XP_002928673.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 380

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D+ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ V P   + I + I+  D 
Sbjct: 181 SASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE +    + K ++G  GR  +IR+Y   P   V D R N
Sbjct: 300 LE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRIN 340


>gi|291276374|ref|YP_003516146.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
 gi|290963568|emb|CBG39400.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
          Length = 352

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 174/301 (57%), Gaps = 22/301 (7%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA- 117
           I++++D + ++  L  +A EE    +L+E + NL+        +  ++LL  + D ND  
Sbjct: 59  IRDLEDLILEDKALAGMAKEE--LEVLRERAKNLE--------ESIKTLLIPK-DPNDGK 107

Query: 118 --YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             YLE+ AG GG E+  +   L R Y R+A+ +K+K E +   +    G K    LIKG 
Sbjct: 108 NIYLELRAGTGGDEAGIFVGDLFRAYCRYADLKKWKVEIISSSENNVGGYKEIIALIKGE 167

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             Y  LK E G HR+ R+   +S  R HTS  ++ + P VD+ +E+ ++ SD RI+ +RA
Sbjct: 168 GVYSRLKFESGTHRVQRVPATESQGRIHTSAITVALMPEVDE-VEVVLNPSDLRIEVFRA 226

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ VNTTDSAVRITHIPTG+ V  Q E+SQHKNK +A  +LR+++Y+ ++++ +++
Sbjct: 227 GGHGGQCVNTTDSAVRITHIPTGINVSIQDEKSQHKNKEKALKILRSRIYDAQMEQ-QQV 285

Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATL 351
            N  ++ K ++G G    +IR+Y   P   + D R  +   S  +V L G+LD  +    
Sbjct: 286 QN-AQTRKNQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEVMLSGNLDPIIDPLT 343

Query: 352 A 352
           A
Sbjct: 344 A 344


>gi|256372571|ref|YP_003110395.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009155|gb|ACU54722.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 357

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 178/336 (52%), Gaps = 30/336 (8%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP ++Q+   A+ + R  + L+  +  ++ +Q           L  + D    L   +  
Sbjct: 22  DPAIFQDQRRAREVARRHKELEAIVGALRRVQ----------ALEGDRDAARELYRGASP 71

Query: 92  LQRIKLEVEYKQFESLLSGE----------ADSNDA---YLEVHAGAGGTESQDWANMLL 138
            +R +L+ E  + ++ L+            +D ND     LE+    GG E+  +A  L 
Sbjct: 72  AEREELKAELDEIDAALARAREALELLLLPSDPNDGRAVILEIRGAEGGEEANLFAKDLA 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY RWA++R +K E L     +  G    TLL++G +A+  LK E G HR+ R+   ++
Sbjct: 132 DMYERWADRRSWKVEVLSRSVSDLGGYDDVTLLVRGDDAWKRLKHEAGPHRVQRVPVTET 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++   P  D+ IE+ I  SD RID YR++G GGQ VNTTDSAVRITH+PTG
Sbjct: 192 QGRVHTSSATVTALPEADE-IEVSIDPSDLRIDVYRSTGPGGQSVNTTDSAVRITHLPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSY 315
           +VV  Q E+SQ +N+A+A  +LRA+L +LE  KR+  A +  + K +I   G   +IR+Y
Sbjct: 251 IVVAMQDEKSQIQNRAKALQVLRARLLKLEQDKRQ--AELTATRKAQIRSGGRSEKIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +  + V D R  +       +L GDLD+   A L
Sbjct: 309 NFKENR-VTDHRIGLTLYRLDQILQGDLDELSDALL 343


>gi|325971906|ref|YP_004248097.1| peptide chain release factor 1 [Spirochaeta sp. Buddy]
 gi|324027144|gb|ADY13903.1| Peptide chain release factor 1 [Spirochaeta sp. Buddy]
          Length = 354

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 188/336 (55%), Gaps = 11/336 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++L+ ++ K   P   Q++   K L +ER HL   I  ++ +       +   +L  EE 
Sbjct: 10  KQLADIDEKLSRPETMQDMKLYKSLNQERSHLAPIIDQLQLMHSLQTQIIGAHQLMKEET 69

Query: 81  DCSILQET--SDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +L+ T    +    +LEV  K+ + LL      +  D  +E+ AG GG E+  +A  
Sbjct: 70  DQEMLEMTREELHELENELEVCEKKTKMLLIPPDPLEGKDIIMEIRAGTGGEEAALFAAN 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+ +A+++ +K E L  ++    G K   + I G + YG L+ E GVHR+ R+   
Sbjct: 130 LFRMYSHYADEKGWKMEILSSNETGIGGYKELVISISGKDVYGSLRWESGVHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ V P  +++ +IEI + D +ID  RA G GGQ VNTTDSAVR+TH+P
Sbjct: 190 ESGGRIHTSAVTVAVLPEAEET-DIEIRQEDLKIDVMRAGGPGGQCVNTTDSAVRLTHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV CQ E+SQ KN+A+A  +LR++L++LE  K+       E+ K+++G G    +IR
Sbjct: 249 TGLVVICQDEKSQIKNRAKALRVLRSRLFDLEEDKKNR--ERAEARKSQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +Y   P   + D R N+       +++G LD+ ++ 
Sbjct: 307 TYNF-PQNRLTDHRINLTLYKLELIMEGQLDEVVEG 341


>gi|88810851|ref|ZP_01126108.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
 gi|88792481|gb|EAR23591.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
          Length = 362

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 146/238 (61%), Gaps = 6/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D    +LE+ AG GG E+  +A  L RMY R+AE+R+++ E +    GE  G K     +
Sbjct: 109 DEKGIFLEIRAGTGGDEAALFAGDLFRMYARYAERRRWRLEIINEAPGEHGGYKEIISRV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E G HR+ R+   +S  R HTS  ++ V P  +   EIE + ++ R+DT
Sbjct: 169 EGAGVYSRLKFESGAHRVQRVPTTESQGRIHTSACTVAVLPEPEQIEEIETATAELRVDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A  +L+AKL   E +++
Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMGLLQAKLTARERERQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++  +   + ++ +G G    +IR+Y   P   V + R  +      ++L+GDLD  +
Sbjct: 289 QQEQSA--TRRSLVGSGDRSERIRTYNF-PQSRVTEHRVGLTLYKLDEILEGDLDPII 343


>gi|308182253|ref|YP_003926380.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
 gi|308064438|gb|ADO06330.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
          Length = 352

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|257064123|ref|YP_003143795.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
 gi|256791776|gb|ACV22446.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
          Length = 352

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 142/247 (57%), Gaps = 13/247 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  D  +E+   AGG E+  +A  L +MY R+ E +++K E +++   E  G K     
Sbjct: 102 ADEKDIIVEIRGAAGGDEAAIFAGDLYKMYARFCESQRWKIETMDVSASEAGGYKEIQFK 161

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG + Y  +K E GVHR+ R+   +S  R HTS +++ V P  D+ I++EI+E+D RID
Sbjct: 162 VKGDHVYSLMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-IDVEINENDLRID 220

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK  A  +LR++LYE  L +
Sbjct: 221 VYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRSRLYEKMLAE 280

Query: 292 R------EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +      E +A IG   + E     +IR+Y   P   V D R     T    +L   L D
Sbjct: 281 QQAAEGAERLAQIGSGDRAE-----KIRTYNA-PQDRVTDHRIGYNGTYNGVLLGDGLGD 334

Query: 346 FMKATLA 352
            + A  A
Sbjct: 335 LITALQA 341


>gi|86570230|gb|ABD04787.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris HaA2]
          Length = 373

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 168/304 (55%), Gaps = 25/304 (8%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS---------DNLQRIKLEVEYK 102
           L  A+   +E++D L D   LLE    + +   + E           D +Q+I++     
Sbjct: 57  LVEAVKAYREVRDELGDIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRV----- 111

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
              +LL  +A D  +  LE+ AG GG E+  +A  L RMY ++A  + +  E +   +G 
Sbjct: 112 ---ALLPKDAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGT 168

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V++ +++
Sbjct: 169 VGGFKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDV 227

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I   D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV  Q  RSQHKN+A A N+LR
Sbjct: 228 DIKPDDLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILR 287

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +++Y+ E Q+R + A   E  K ++G G    +IR+Y   P   V D R N+       V
Sbjct: 288 SRIYDAE-QQRIDSARSAE-RKQKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQV 344

Query: 339 LDGD 342
           + G+
Sbjct: 345 IAGE 348


>gi|312897943|ref|ZP_07757356.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
 gi|310620977|gb|EFQ04524.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
          Length = 361

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 151/241 (62%), Gaps = 8/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171
           D  +  +E+  GAGG E+  +A  L RMY+++ EK+K +K   +  +  E  G K     
Sbjct: 107 DDKNVIMEIRGGAGGDEAAIFAGDLFRMYSKYIEKQKGWKASIISSNAPELGGYKEVIFS 166

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G   YG LK E GVHR+ R+   +S  R HTS +++ V P  +D +EI ++  D R+D
Sbjct: 167 VEGDGVYGKLKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEAED-VEINLNMEDVRVD 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASGAGGQHVN T SAVR+THIP+G+VV+CQ ERSQ +N+A+A  +L+A+L  L   +
Sbjct: 226 YFRASGAGGQHVNKTSSAVRMTHIPSGIVVECQDERSQLENRAKAVRVLKARL--LAQAE 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            E  A + E+ ++++G G    ++R+Y   P   V D R N+      ++++GD+D+F++
Sbjct: 284 EEANAEVTEARRSQVGTGDRSERVRTYNY-PQGRVTDHRINLTLYKLENIMNGDIDEFIQ 342

Query: 349 A 349
           A
Sbjct: 343 A 343


>gi|325105445|ref|YP_004275099.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
 gi|324974293|gb|ADY53277.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
          Length = 358

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 174/312 (55%), Gaps = 19/312 (6%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           +++ E     N +S I   +D L +  +  L E+A EE D  ++ E  +   +I+L +  
Sbjct: 43  LIVDEYYKYKNVVSNIATNKDILANEKDQELREMAKEELDV-LIPEKEEMEAKIRLMLVP 101

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           K          D  DA +E+  G GG E+  +A  L RMYTR+ E + ++TE LE+ DG 
Sbjct: 102 KD-------PGDEKDAIVEIRGGTGGDEAAIFAGDLYRMYTRYCEGKGWRTEVLEVTDGT 154

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     + G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++ +++
Sbjct: 155 NGGYKEVVFKVSGEDVYGTLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-VDV 213

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D  + T R+ GAGGQ+VN  ++ V++TH PTG+VV CQ ERSQ  N+ +A  MLR
Sbjct: 214 EINPADIEMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQVERSQLGNRERAMEMLR 273

Query: 282 AKLYELELQK-REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +KLYE EL K  EEIA+     KT +  G    +IR+Y   P   V + R  +   +   
Sbjct: 274 SKLYERELAKYNEEIAS---KRKTMVSTGDRSAKIRTYNY-PQGRVTEHRIGLTLYNLPA 329

Query: 338 VLDGDLDDFMKA 349
           V++G++ + + A
Sbjct: 330 VMNGEIQEILDA 341


>gi|332213665|ref|XP_003255945.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 380

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 140/247 (56%), Gaps = 11/247 (4%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299

Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342
           L+    KR+    I   SK   G   +IR+Y   P   V D R N         + GD  
Sbjct: 300 LEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYL 355

Query: 343 LDDFMKA 349
           LD+ +++
Sbjct: 356 LDELVQS 362


>gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
 gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
          Length = 359

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 171/312 (54%), Gaps = 24/312 (7%)

Query: 47  RERQHLDNAISFIKEIQ----DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           RE + + ++I+  +E+Q    D   D+L+  ELA   D            Q+ KLE E K
Sbjct: 51  REYRKVVDSIAENEELQREKLDPEMDSLVKAELADLRD------------QKEKLEEEIK 98

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
               L     D  +  +E+H  AGG E+  +A  L  MYTR+AE + +K + ++ +  + 
Sbjct: 99  VL-MLPKDPNDDKNIIMEIHGAAGGDEASLFAADLYNMYTRYAESQGWKVQIVDENATDV 157

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K   L+I G   Y  LK E G HR+ R+   +S  R HTS +++ V P  +D ++IE
Sbjct: 158 GGFKEIVLMISGDKVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDIE 216

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   D R D YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q ERSQ +N+ +A  +L+A
Sbjct: 217 IDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKA 276

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++Y+    + E+  N  E  K  +G G    +IR+Y   P   V D R  +       V+
Sbjct: 277 RVYDYYQSQEEDAYN--EERKNAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVM 333

Query: 340 DGDLDDFMKATL 351
           +G+L++ ++A +
Sbjct: 334 NGELNEIIEALI 345


>gi|298209284|ref|YP_003717463.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
 gi|83849211|gb|EAP87080.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
          Length = 358

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 141/232 (60%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A +EV AG GG E+  +A  + RM T++ E + +    ++  +G   G K     +
Sbjct: 106 DSKNAVVEVRAGTGGDEASIFAGDIYRMLTKFCESKGWNCSTVDFSEGTSGGFKEIQFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +++ V+P  ++  ++EI   D RID 
Sbjct: 166 SGDDVYGTLKYEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVEIDPKDVRIDY 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QK 291
           + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +K
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKK 284

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +EE A    S  T      +IR+Y     + V D R N+      +++DGD+
Sbjct: 285 QEEDAAKRGSMVTSGDRSAKIRTYNYAQGR-VTDHRINLTIYDLQNIIDGDI 335


>gi|326915756|ref|XP_003204179.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Meleagris gallopavo]
          Length = 393

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/226 (43%), Positives = 138/226 (61%), Gaps = 7/226 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L+  E  ++D  +EV AG GG E+  + + +  MY R+A  +K+K E LE    E  G++
Sbjct: 131 LIPSEETNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLR 190

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A   I G +AY ++K E GVHR+ R+   +   R HTS  ++ + P   + +E++I+  
Sbjct: 191 HAVASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MELKINPK 249

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RI+T RASGAGGQHVNTTDSAVRI HIPTGV  +CQQERSQ +NK +A  ML AKLY 
Sbjct: 250 DLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVASECQQERSQIRNKEKAMQMLCAKLYN 309

Query: 287 LELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           ++L+  EE        K +IG  GR  +IR+Y   P   + D R +
Sbjct: 310 IKLE--EETKKRNSVRKIQIGTKGRSEKIRTYNF-PQDRITDHRIS 352


>gi|207091639|ref|ZP_03239426.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 352

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+  LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|299132853|ref|ZP_07026048.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
 gi|298592990|gb|EFI53190.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
          Length = 358

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 158/272 (58%), Gaps = 17/272 (6%)

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133
           A+ E +  +L E  ++L Q+I++        +LL  +A D  +  LE+ AG GG E+  +
Sbjct: 75  AMAESERPVLLERQESLEQQIRV--------ALLPKDAMDERNVVLEIRAGTGGDEASLF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR+ R+
Sbjct: 127 AGDLFRMYERFAALQGWKVEVMSASEGTMGGYKEIVAEVQGRGAFAKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +++ R HTS +++ V P  +D ++I+I +SD RI+T RA GAGGQHVN T+SA+RIT
Sbjct: 187 PDTEASGRIHTSAATVAVLPEAED-VDIDIKDSDLRIETMRAQGAGGQHVNKTESAIRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+VV  Q  RSQHKN+A A N+LR+++ + E Q+    A      + ++G G    
Sbjct: 246 HIPTGIVVMMQDSRSQHKNRASAMNILRSRVLDGERQR--AAAERSADRRGQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +IR+Y   P   V D R N+       V+ G+
Sbjct: 304 RIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 334


>gi|227498082|ref|ZP_03928255.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
 gi|226832520|gb|EEH64903.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
          Length = 366

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 141/249 (56%), Gaps = 9/249 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +EV AG GG ES  +A+ L RMYTR+AE+  +  E L+  D +  G K   L +
Sbjct: 107 DARDVIIEVKAGEGGEESALFASDLARMYTRYAERMGWAVEVLDATDSDLGGYKDVRLAV 166

Query: 173 KGPNA-------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  +A       +  LK E GVHR+ R+   +S  R HTS + + V P VDD  E+EI  
Sbjct: 167 KARSAVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEVDDPGELEIDP 226

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  A  +LRA+L 
Sbjct: 227 NDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAALRVLRARLL 286

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                +          S+   +    +IR+Y   P   + D RT  +  + S VLDGDL 
Sbjct: 287 AERAAQAAAEEAEARRSQVRTVDRSERIRTYNF-PENRITDHRTGYKAYNLSTVLDGDLG 345

Query: 345 DFMKATLAI 353
             + + +A+
Sbjct: 346 PVIDSAIAM 354


>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
          Length = 359

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 185/343 (53%), Gaps = 11/343 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILL 73
           D  + R   L     DP +  +      L +E   + + ++  K+ +  L D   +  +L
Sbjct: 9   DGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESEEVL 68

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132
             + +ED  ++ +E  ++LQ+ K ++E K    +L  +  D  +  +E+   AGG E+  
Sbjct: 69  RESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAGGDEASL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LL MY  +AE++ +K E ++    E  G K   ++I G N Y  LK E G HR+ R
Sbjct: 129 FAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P  D+ ++++I   D R D YR+SGAGGQHVN T SAVR+
Sbjct: 189 VPVTESAGRVHTSTATVGVMPEYDE-VDLKIDPKDIRTDVYRSSGAGGQHVNKTSSAVRM 247

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y+    + +E     ++ K  IG G   
Sbjct: 248 THIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQNRKNAIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R  +       +++G+LD+ + A + 
Sbjct: 306 ERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 347


>gi|170077656|ref|YP_001734294.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
 gi|238689045|sp|B1XJH8|RF1_SYNP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169885325|gb|ACA99038.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
          Length = 363

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 149/243 (61%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+AE + ++ + L     +  G K+  L I
Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS ++I V P VDD +E+EI   D  + T
Sbjct: 172 QGEQVYSKLKYEAGVHRVQRVPVTEAGGRVHTSTATIAVMPEVDD-VEVEIDPKDIEMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE+ELQ++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +    K+++G G    +IR+Y  +  + V D R   +  S +  L+GD++D ++A
Sbjct: 291 QE--EVSSMRKSQVGTGARSEKIRTYNYKDNR-VTDHRLG-QNFSLAPALEGDIEDMLQA 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|162138527|ref|YP_483698.2| peptide chain release factor 1 [Rhodopseudomonas palustris HaA2]
 gi|119361590|sp|Q2J423|RF1_RHOP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 361

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 164/292 (56%), Gaps = 25/292 (8%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS---------DNLQRIKLEVEYK 102
           L  A+   +E++D L D   LLE    + +   + E           D +Q+I++     
Sbjct: 45  LVEAVKAYREVRDELGDIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRV----- 99

Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
              +LL  +A D  +  LE+ AG GG E+  +A  L RMY ++A  + +  E +   +G 
Sbjct: 100 ---ALLPKDAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGT 156

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V++ +++
Sbjct: 157 VGGFKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDV 215

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I   D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV  Q  RSQHKN+A A N+LR
Sbjct: 216 DIKPDDLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILR 275

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           +++Y+ E Q+R + A   E  K ++G G    +IR+Y   P   V D R N+
Sbjct: 276 SRIYDAE-QQRIDSARSAE-RKQKVGSGDRSERIRTYNF-PQGRVTDHRINL 324


>gi|300214391|gb|ADJ78807.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius
           CECT 5713]
          Length = 360

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 173/296 (58%), Gaps = 12/296 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116
           KE+  ++ D+  +L   L+++  S+++E   N+  +++KLE E K    LL  +  D  +
Sbjct: 55  KEVTQQISDDEEMLSDGLDDEMASLVKEELSNVKDEKVKLEEEIKIL--LLPKDPNDDKN 112

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G +
Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  LK E G HR+ RI   +S  R HTS +++ V P  +D +EIE+   D R+D YR+S
Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q  +E +
Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               + K+ +G G    +IR+Y   P   V D R  +       +++G+L+D + A
Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDA 344


>gi|302759755|ref|XP_002963300.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
 gi|300168568|gb|EFJ35171.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
          Length = 509

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/271 (40%), Positives = 155/271 (57%), Gaps = 26/271 (9%)

Query: 88  TSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            S  LQ    EV   Q + LL      EADS         GAGG E+  +A+ L +MY +
Sbjct: 32  ASGELQTATREVRDAQHDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYDK 83

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           +A    ++ E L I   +  G K A+  I G   YG LK E GVHR+ R+   +   R H
Sbjct: 84  YAANNSWRFEVLSITTTDTRGYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIH 143

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +S+ + P  ++ I++EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  
Sbjct: 144 TSTASVAILPEANE-IDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHTPTGIVVAI 202

Query: 264 QQERSQHKNKAQAWNMLRAKLYELE----LQKREEIA--NIGESSKTEIGWGRQIRSYVL 317
           Q ERSQHKNKA+A ++L A+LYELE    +  R E+    IG S ++E     +IR+Y  
Sbjct: 203 QDERSQHKNKAKALSILYARLYELERSRAVASRSELRQDQIGSSDRSE-----RIRTYNF 257

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG-DLDDFM 347
            P   V D R  + + +   +++G D+D+++
Sbjct: 258 -PQGRVTDHRVGVTQHAIEQIMEGIDVDNWI 287


>gi|317013501|gb|ADU80937.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24]
          Length = 352

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K   +LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ ++ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVTLNPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|15644707|ref|NP_206877.1| peptide chain release factor 1 [Helicobacter pylori 26695]
 gi|2500136|sp|P55998|RF1_HELPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2313158|gb|AAD07148.1| peptide chain release factor RF-1 (prfA) [Helicobacter pylori
           26695]
          Length = 352

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+  LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|256848019|ref|ZP_05553463.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715079|gb|EEU30056.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 362

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY  +AEK+ +  E ++  + E  G K   L+I
Sbjct: 111 DDKNIIMEIRGAAGGDEASLFAGDLYNMYLHYAEKQGWNVEIVDKTETEVGGFKEIVLMI 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +D ++I++   D R+D 
Sbjct: 171 SGDKVYSKLKFENGAHRVQRIPVTESAGRVHTSTATVGVMPEAED-VQIDLDPKDIRVDV 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   QK 
Sbjct: 230 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDYYQQK- 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E +   +  K  IG G    +IR+Y   P   V D R  +       ++DGDLD+ ++A
Sbjct: 289 -EQSAYDQKRKDAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMDGDLDEIIEA 346

Query: 350 TL 351
            +
Sbjct: 347 LI 348


>gi|317008750|gb|ADU79330.1| peptide chain release factor 1 [Helicobacter pylori India7]
          Length = 352

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+  LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|302785810|ref|XP_002974676.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
 gi|300157571|gb|EFJ24196.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
          Length = 412

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 188/350 (53%), Gaps = 36/350 (10%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--RLCDNLI--- 71
           D+A Q    L  K  DP +  +  E + L +    ++  ++  ++ ++  R  D+L    
Sbjct: 60  DSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEMI 119

Query: 72  -------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
                  L E+A+EE   +IL+E   NL+      EY +   L S   DS +  LEV AG
Sbjct: 120 KSSGDKELAEMAVEES--AILKENITNLE------EYLKVLLLPSDPLDSRNIMLEVRAG 171

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  WA  L+RMY ++AE+ ++    +   + E+ G K   L I G   Y  LK E
Sbjct: 172 TGGDEAGIWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYE 231

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +++ + P VD+ +E+ I   D  + T R+ GAGGQ+VN
Sbjct: 232 SGVHRVQRVPATESQGRVHTSTATVAIMPEVDE-VEVVIDPKDIELTTARSGGAGGQNVN 290

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
             ++AV + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E   I    ++
Sbjct: 291 KVETAVDLFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRS 348

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++G G    +IR+Y  +  + V D RT I         + DLD F+   +
Sbjct: 349 QVGTGARSEKIRTYNYKDNR-VSDHRTKI---------NFDLDSFLSGNI 388


>gi|94264416|ref|ZP_01288206.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93455173|gb|EAT05391.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 185/337 (54%), Gaps = 19/337 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQH---LDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  +  DP +  +    + L +E  H   L+   +  ++  D L  N  LL+   EEDD 
Sbjct: 15  LEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANGQLLQ---EEDDP 71

Query: 83  SIL----QETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            IL    QE  +  QR+ +L+ E +    +     D  +  LE+ AG GG E+  +   L
Sbjct: 72  EILELARQEGEELRQRLAQLDKELR-LALVPPDPNDEKNILLEIRAGTGGDEASLFVANL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+AE+  +K E L     E  G K    LI G + +  LK E GVHR+ R+   +
Sbjct: 131 FRMYSRYAEQLGWKVEVLSSSATEVGGYKEIIALISGDHVFSRLKYESGVHRVQRVPETE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS  ++ V P  ++ +E+ I+ ++ + D +R+SG GGQ VNTTDSAVR+TH+PT
Sbjct: 191 TQGRVHTSAVTVAVLPEAEE-VELTINPAELKYDVFRSSGPGGQSVNTTDSAVRVTHLPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++++   +    K+++G G    +IR+
Sbjct: 250 GLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVGSGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   + D R N+      DV+ G LD+ ++  +
Sbjct: 308 YNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPLM 343


>gi|293399752|ref|ZP_06643898.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306152|gb|EFE47395.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 358

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 142/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS++A +E+   AGG E   +A  L RMY+++AE + +K E +E+ D E  G    + ++
Sbjct: 108 DSHNAIVEIRGAAGGDEGNIFAGDLYRMYSKYAESQGWKIEIVEMDDSEAGGFSLVSFMV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   YG LK E G HR+ R+   +S  R HTS +++ V P ++ + + +I  +D  I+T
Sbjct: 168 KGDGVYGKLKFESGSHRVQRVPKTESQGRIHTSTATVLVTPEIE-AEDFDIDMNDLEIET 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SGAGGQH+N TDSAVRI H PTG+ V+CQ  RSQH+N+A A   +R+++YE   +K 
Sbjct: 227 MRSSGAGGQHINKTDSAVRIVHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKL 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE    G   +++IG G    +IR+Y   P   V D R          +++G + D + A
Sbjct: 287 EE--EQGMERRSKIGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGKMQDLLDA 343


>gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
 gi|270506369|gb|ACZ84647.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
          Length = 350

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 180/343 (52%), Gaps = 10/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  +   + L  K  DP +  +  +A+   R    L   I+  +E++    D     
Sbjct: 1   MNLDELLSEYAELELKLADPTVHAHPAQARTFGRRYAELTPIITTYRELEGVQNDLDTAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132
           ELA E++      E +  L+    E+E K    L+  +  D  D  +E+ AG GG ES  
Sbjct: 61  ELASEDE---AFAEEAKELEGRVPELEDKLRHLLIPRDPNDDKDIIMEIKAGEGGEESAL 117

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG-W--LKGEQGVHR 189
           +A  LLRMY R+AE+  +KTE ++    +  G K  T+ +K     G W  LK E GVHR
Sbjct: 118 FAGDLLRMYLRYAERVGWKTELIDATHSDLGGYKDVTVALKARGDEGVWSRLKFEGGVHR 177

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++ +++++  +D RID YR+SG GGQ VNTTDSA
Sbjct: 178 VQRVPVTESQGRIHTSAAGVLVYPEAEE-VDVQVDPNDLRIDVYRSSGPGGQSVNTTDSA 236

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITHIPTGVV  CQ E+SQ +NK  A  +LRA+L  +  ++    A     S+   +  
Sbjct: 237 VRITHIPTGVVASCQNEKSQLQNKESAMRILRARLQAIAEEEANAAAMAERKSQIRTVDR 296

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R   +  +   VLDGDL   +++ L
Sbjct: 297 SERIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLTAVIQSLL 338


>gi|307636767|gb|ADN79217.1| peptide chain release factor 1 [Helicobacter pylori 908]
 gi|325995353|gb|ADZ50758.1| Peptide chain release factor 1 [Helicobacter pylori 2018]
 gi|325996950|gb|ADZ49158.1| Peptide chain release factor 1 [Helicobacter pylori 2017]
          Length = 352

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K   +LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ ++ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVTLNPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|312112637|ref|YP_003990953.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
 gi|311217738|gb|ADP76342.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
          Length = 358

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 192/347 (55%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +F+   AV+ R   LN    DP +  +  + +   +E+  L+  +   +E   ++ +L D
Sbjct: 1   MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVRKQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E  D L++ + E+  K    LL  +  D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P +++ IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALI 343


>gi|239828604|ref|YP_002951228.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
 gi|259585224|sp|C5D9N4|RF1_GEOSW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239808897|gb|ACS25962.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
          Length = 358

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 192/347 (55%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +F+   AV+ R   LN    DP +  +  + +   +E+  L   +   +E   ++ +L +
Sbjct: 1   MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLSETVQTYREYKSVRKQLDE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E  D L++ + E+  K    LL  +  D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLDPEMREMVKEEIDELEQKEEELVNKLKILLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTIIGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P +++ IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VLDG+LD+ ++A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGNLDEIIEALI 343


>gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
 gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
          Length = 359

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 180/326 (55%), Gaps = 13/326 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP L  +   A+ + R    +   ++  ++++    D     ELA   DD S  
Sbjct: 20  LERQLADPALHADAGAARKVGRRFAQVSPIVACYRKLEAARGDLEAARELAA--DDASFA 77

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            E  +   ++  E++  Q   LL+     D++D  LEV +G GG ES  +A  L RMY R
Sbjct: 78  DEVEELTAKVA-ELD-NQLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIR 135

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIK--GPNAYG-W--LKGEQGVHRLVRISPYDS 198
           +AE+  +    L+    +  G K ATL I+  G +A G W  LK E GVHR+ R+   +S
Sbjct: 136 YAERHGWTVTLLDETTSDLGGYKDATLSIRSRGDSADGVWARLKFEGGVHRVQRVPVTES 195

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG
Sbjct: 196 QGRVHTSAAGVLVYPEPEEVEEVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTG 255

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVL 317
           +VV CQ ERSQ +NKA+A  +L A+L  L  ++ E  A+   +S+   +    +IR+Y  
Sbjct: 256 IVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEADASADRASQIRTVDRSERIRTYNF 315

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDL 343
            P   + D R N +  +   VLDGD+
Sbjct: 316 -PENRIADHRINFKAHNLDQVLDGDM 340


>gi|225874213|ref|YP_002755672.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
 gi|254790854|sp|C1F2J1|RF1_ACIC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225791643|gb|ACO31733.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
          Length = 358

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 147/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  + RMY R+AE+R++K E L + +    G K    +I
Sbjct: 105 DEKNVVVEIRAGTGGDEASLFAAEVFRMYARYAEQRRWKVEVLSMSESSVGGAKEVIAII 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  +K E GVHR+ R+   ++  R HTS  ++ V P  ++ ++++I   D RIDT
Sbjct: 165 EGDHVYSQMKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEE-VDVKIEAKDLRIDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+E++++
Sbjct: 224 FCSSGPGGQSVNTTYSAVRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERQ 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   + +  K ++G G    +IR+Y   P   + D R  +     ++V++G L   + A
Sbjct: 284 QQA--LAKERKQQVGSGDRSEKIRTYNF-PQNRLTDHRIGLTIHQLAEVMEGRLQPVIDA 340

Query: 350 TLA 352
             A
Sbjct: 341 LTA 343


>gi|118475342|ref|YP_892837.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223541|sp|A0RRK4|RF1_CAMFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118414568|gb|ABK82988.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 355

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/321 (36%), Positives = 176/321 (54%), Gaps = 20/321 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           + R + LN+   DP +  ++     L +E+++L+   +A      I + + +N  LLE  
Sbjct: 10  IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLE-- 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA---YLEVHAGAGGTESQD 132
               D  + +   D L+ ++ E+   + E  L     D ND    +LE+ AG GG E+  
Sbjct: 68  ----DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L   Y R+ E+R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R
Sbjct: 124 FVGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P V+DS EI+I+ +D +ID  R+SG GGQ VNTTDSAVR+
Sbjct: 184 VPETESQGRVHTSAITVAIMPEVEDS-EIDINPNDLKIDVMRSSGHGGQSVNTTDSAVRV 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310
           THIPTG+VV  Q  +SQHKNK  A  +L+A+LY  ++Q+RE      +  K ++G G   
Sbjct: 243 THIPTGLVVVNQDGKSQHKNKDAAIKVLKARLY--DMQERERREKESKERKDQVGTGDRS 300

Query: 311 -QIRSYVLQPYQMVKDLRTNI 330
            +IR+Y   P   + D R N+
Sbjct: 301 GRIRTYNY-PQNRISDHRINL 320


>gi|94971498|ref|YP_593546.1| peptide chain release factor 1 [Candidatus Koribacter versatilis
           Ellin345]
 gi|119361503|sp|Q1II28|RF1_ACIBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94553548|gb|ABF43472.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 359

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L RMY R+AE +++K E L   +    G+K    +I
Sbjct: 106 DDKNIIVEIRAGTGGDEASLFAAELFRMYNRYAETQRWKVEVLSSSESGVGGLKEVIAII 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   ++  R HTS  ++ V P  ++ ++I+I   D RIDT
Sbjct: 166 EGRGAYSKLKYESGVHRVQRVPQTETQGRVHTSAVTVAVLPEAEE-VDIKIEAKDIRIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVRITH+PT  VV CQ E+SQ KN+ +   +LRA+LYE+E QK+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRITHLPTNTVVSCQDEKSQIKNREKGMRVLRARLYEVEQQKQ 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            +   + +  K ++G G    +IR+Y   P   V D R        S+ +DG ++  ++A
Sbjct: 285 ADA--LAKERKQQVGSGDRSEKIRTYNF-PQNRVTDHRIGYTVHQLSEFMDGKINALIEA 341


>gi|189345639|ref|YP_001942168.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
 gi|238692166|sp|B3EE55|RF1_CHLL2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189339786|gb|ACD89189.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
          Length = 357

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 162/270 (60%), Gaps = 7/270 (2%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
           ++Q   ++LQ    E+E +Q + LL    EADS +  +E+ AG GG E+  +A  LLRMY
Sbjct: 76  LVQMEIEDLQEKLPELE-QQLKVLLLPKDEADSRNVIMEIRAGTGGDEAALFAADLLRMY 134

Query: 142 TRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            R+AE++ +K   L+  +     G +  TL + G + +  +K E GVHR+ R+   ++  
Sbjct: 135 QRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYESGVHRVQRVPDTETQG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +S+ V P  ++ +++EI   D R DTYR+ G GGQ+VN  ++AVRITH+PTG+V
Sbjct: 195 RIHTSAASVAVLPEAEE-VDVEIRRDDLRFDTYRSGGKGGQNVNKVETAVRITHLPTGIV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQP 319
             CQ+ERSQ +NK +A  MLR KLY+++L +++++ A++  S  +      +IR+Y   P
Sbjct: 254 AACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADLRRSMVSTGDRSAKIRTYNY-P 312

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              V D R      +   ++ G++ D ++A
Sbjct: 313 QSRVTDHRIGFTSHALPQIMQGEIGDVIEA 342


>gi|317011921|gb|ADU82529.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75]
          Length = 352

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345


>gi|302521935|ref|ZP_07274277.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|318060718|ref|ZP_07979441.1| peptide chain release factor 1 [Streptomyces sp. SA3_actG]
 gi|318075509|ref|ZP_07982841.1| peptide chain release factor 1 [Streptomyces sp. SA3_actF]
 gi|333024405|ref|ZP_08452469.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
 gi|302430830|gb|EFL02646.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|332744257|gb|EGJ74698.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
          Length = 357

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/250 (40%), Positives = 145/250 (58%), Gaps = 12/250 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE L+  + E  G K   + 
Sbjct: 99  SDEKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVA 158

Query: 172 IK---------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           +K         G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++E
Sbjct: 159 VKTKGNANPEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDVE 217

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR+
Sbjct: 218 INPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRS 277

Query: 283 KLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLDG
Sbjct: 278 RLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGYKAYNLDQVLDG 336

Query: 342 DLDDFMKATL 351
           DLD  ++A +
Sbjct: 337 DLDAVIQACV 346


>gi|328950071|ref|YP_004367406.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450395|gb|AEB11296.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
          Length = 369

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 140/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+ AG GG E+  +A  L  MY R+AE+  +  E L+ H  +  G       +
Sbjct: 113 DAKNAIVEIRAGTGGEEAALFAGDLYNMYVRYAERLGYTVEVLDSHPTDLGGFSKVVFQV 172

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG  K E GVHR+ R+   ++  R HTS +++ V P  +++ + E+  S+ RID 
Sbjct: 173 NGSGAYGVFKYESGVHRVQRVPATETQGRIHTSTATVAVLPEAEEA-DFELDMSEIRIDV 231

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ KN+ +A  +LR++L  LE+++ 
Sbjct: 232 QRASGPGGQGVNTTDSAVRVVHLPTGIIVTCQDSRSQIKNREKALTILRSRL--LEMKRA 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A +  +   +IG G    +IR+Y   P   V D R +    +   VL G+L++   A
Sbjct: 290 EEEAKLRRTRLAQIGTGERSEKIRTYNF-PQSRVTDHRIHYTTHNLEGVLAGELEELTNA 348


>gi|109948016|ref|YP_665244.1| peptide chain release factor 1 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973223|sp|Q17VT1|RF1_HELAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109715237|emb|CAK00245.1| peptide chain release factor RF-1 [Helicobacter acinonychis str.
           Sheeba]
          Length = 352

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +++ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IKKSELETTIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +EI I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEISINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.]
          Length = 363

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/278 (37%), Positives = 156/278 (56%), Gaps = 11/278 (3%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
           L+ +D  I +   D ++ + L+ E   KQ   LL    E D  +  LE+ AG GG E+  
Sbjct: 69  LKNEDPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE R +K E L        G+K    LI+G  AY   K E G HR+ R
Sbjct: 129 FATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFKYESGTHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  ++ +E++I   + ++D YR++G GGQ VNTTDSAVRI
Sbjct: 189 VPVTEAQGRIHTSAVTVAVLPEAEE-VELDIDPGEIKVDVYRSTGPGGQSVNTTDSAVRI 247

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ E+SQ KNK++A  +LRA+L  L+    E+        K +IG G   
Sbjct: 248 THLPTGLVVTCQDEKSQFKNKSKAMKVLRARL--LDNITMEQNQKRSAERKHQIGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R  +       +L+G++D+ +
Sbjct: 306 ERIRTYNF-PQSRVTDHRIGLTLYKLEYILEGNIDEII 342


>gi|210134282|ref|YP_002300721.1| peptide chain release factor 1 [Helicobacter pylori P12]
 gi|238058714|sp|B6JPI0|RF1_HELP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|210132250|gb|ACJ07241.1| peptide chain release factor RF-1 [Helicobacter pylori P12]
          Length = 352

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+ +LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345


>gi|254780874|ref|YP_003065287.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040551|gb|ACT57347.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 357

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 145/243 (59%), Gaps = 10/243 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AG GG+E+  +   L RMY R+A  RK+K E L   D ++ G K     I
Sbjct: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +  +K E GVHR+ R+   +++ R HTS +++ V P   + I+++I   D RIDT
Sbjct: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG+GGQHVNTTDSAVRITHIPTG++V    E+SQH+N+ +A  +LRA+LY++E   R
Sbjct: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE---R 282

Query: 293 EEIANIGESS-KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           + +AN   ++ K +IG G    +IR+Y     + + D R N+       VL G +DD + 
Sbjct: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341

Query: 349 ATL 351
             L
Sbjct: 342 PLL 344


>gi|78185965|ref|YP_374008.1| peptide chain release factor 1 [Chlorobium luteolum DSM 273]
 gi|119361573|sp|Q3B6R6|RF1_PELLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78165867|gb|ABB22965.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           luteolum DSM 273]
          Length = 358

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/245 (38%), Positives = 146/245 (59%), Gaps = 4/245 (1%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGI 165
           L   EADS +  +E+ AG GG E+  +A  L+RMY R+AE++ ++ E L+ ++     G 
Sbjct: 100 LPKDEADSRNVIMEIRAGTGGEEAALFAADLMRMYQRYAERQGWRCEVLDYNESSGPGGF 159

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +  TL I G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++ +++EI  
Sbjct: 160 REVTLTISGHDVYGTLKYESGVHRVQRVPETETQGRIHTSAASVAVLPEAEE-VDVEIRR 218

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R DTYR+ G GGQ+VN  ++AVRITH PTG+V  CQ+ERSQ +NK +A  ML AKLY
Sbjct: 219 DDLRFDTYRSGGKGGQNVNKVETAVRITHEPTGLVAACQEERSQLQNKERAMKMLMAKLY 278

Query: 286 ELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +++LQ +++E A++  +         +IR+Y   P   V D R           + G++ 
Sbjct: 279 DIKLQEQQQERADMRRTMVASGDRSAKIRTYNY-PQSRVTDHRIGFTSHGLPHFMQGEIG 337

Query: 345 DFMKA 349
           + + A
Sbjct: 338 ELIDA 342


>gi|221195206|ref|ZP_03568262.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
 gi|221185109|gb|EEE17500.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
          Length = 355

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 175/333 (52%), Gaps = 30/333 (9%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K  DP +  +  E   + +E  H D A   + E+     D L  +E A E     +L
Sbjct: 15  LEKKLADPAVVSDPKEYARIAKE--HADQA--ELVELSRSYIDALDDIEAAKE-----LL 65

Query: 86  QETSDNLQRIKLEVEYKQFES------------LLSGEA-DSNDAYLEVHAGAGGTESQD 132
             +SD  ++  L+ +  + E+            L+ G+  D  D  +E+ AG GG E+  
Sbjct: 66  SGSSDAEEKEMLQADISENEAKLPELEDEIKIKLIPGDPNDEKDTIVEIRAGVGGDEAAI 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MY R+AE R +K + L     E  G K+    + G   Y  +K E GVHR+ R
Sbjct: 126 FAGDLFKMYERFAESRGWKVQVLSSSPSEAGGFKTIEFKVTGEKVYSVMKFESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R  TS +++ V P  DD I+I+I++ D RIDTY ASG GGQ VNTT SAVRI
Sbjct: 186 VPKTESQGRIQTSTATVAVLPEADD-IDIQINQEDLRIDTYCASGPGGQGVNTTYSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PT  VVQ Q +RSQ +N+     MLRA+LYE EL++++  A  G    ++IG G   
Sbjct: 245 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEQELERQQ--AEQGADRLSQIGHGARS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            +IR+Y  QP   V D R     T  + VL GD
Sbjct: 303 EKIRTYN-QPQDRVTDHRIGFNGTY-NGVLLGD 333


>gi|108562503|ref|YP_626819.1| peptide chain release factor 1 [Helicobacter pylori HPAG1]
 gi|119361549|sp|Q1CV77|RF1_HELPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|107836276|gb|ABF84145.1| peptide chain release factor RF-1 [Helicobacter pylori HPAG1]
          Length = 352

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+  LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K++ E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGNEAGIFVGDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|289428601|ref|ZP_06430285.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|289158295|gb|EFD06514.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|313807753|gb|EFS46240.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA2]
 gi|313825434|gb|EFS63148.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA1]
 gi|314978719|gb|EFT22813.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA2]
 gi|315088524|gb|EFT60500.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA1]
 gi|327331707|gb|EGE73444.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA3]
 gi|327443483|gb|EGE90137.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA2]
 gi|332675656|gb|AEE72472.1| peptide chain release factor 1 [Propionibacterium acnes 266]
          Length = 361

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 185/347 (53%), Gaps = 28/347 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +RL  + T+  D  +  +      L +    L + +S    + D+L  ++   E  
Sbjct: 10  DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            EED    L+  ++ L R +L++   +   LL  S   D  DA +E+H+G GG ES  +A
Sbjct: 69  TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191
             LLRMYTR+AE+  +    L     +  G ++  + + G P+  AYG+LK E GVHR+ 
Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302
           +TH+ TG+V  CQ ERSQ +NKA+A  MLRAK+          E +  +R+++  +  S+
Sbjct: 245 LTHLRTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        +R+Y   P   + D R   +      +L GDL D + A
Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|113476549|ref|YP_722610.1| peptide chain release factor 1 [Trichodesmium erythraeum IMS101]
 gi|119361636|sp|Q110D7|RF1_TRIEI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110167597|gb|ABG52137.1| bacterial peptide chain release factor 1 (bRF-1) [Trichodesmium
           erythraeum IMS101]
          Length = 369

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 188/343 (54%), Gaps = 31/343 (9%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD----------NLIL 72
           L  +  DP + ++  E + L + R  L+  ++     K  Q+ L D          +L +
Sbjct: 20  LTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQEELADAKEILKEAVGDLEM 79

Query: 73  LELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E+A +E +D     E+ +N  +I L         L     D  +  LE+ AG GG E+ 
Sbjct: 80  QEMAKVEVEDLEAKLESLENQMKIAL---------LPRDPNDDKNIMLEIRAGTGGDEAS 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L+RMY+R++E + +K   L     +  G K A L IKG + Y  LK E GVHR+ 
Sbjct: 131 IWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKLKFEAGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ + P VDD +E+EI + D  + T R+ GAGGQ+VN  ++AV 
Sbjct: 191 RVPVTEAGGRVHTSTATVAIMPEVDD-VEVEIDQKDIELSTARSGGAGGQNVNKVETAVD 249

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+ + C QERSQ +N+ +A  +LRAKLYE++LQ  E+ A +    ++++G G  
Sbjct: 250 LFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQ--EQQAEVSSIRRSQVGTGSR 307

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y  +  + V D R N +  S   +L+GD+++ ++A +
Sbjct: 308 SEKIRTYNYKDNR-VTDHRLN-QNFSLVPLLEGDIENVIQACI 348


>gi|325679581|ref|ZP_08159156.1| peptide chain release factor 1 [Ruminococcus albus 8]
 gi|324108611|gb|EGC02852.1| peptide chain release factor 1 [Ruminococcus albus 8]
          Length = 359

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 147/241 (60%), Gaps = 8/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  GAGG E+  +AN L RMYT +A ++ ++ + +  ++ E  G K  T  +
Sbjct: 107 DDRNVIIEIRGGAGGEEAALFANSLYRMYTMYAAQKGWQIDVMSANETELGGYKEITFTV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES-DCRID 231
            G  AY  LK E GVHR+ R+   +S  R HTS  ++ V P  ++ +E++++E  D +++
Sbjct: 167 SGQGAYSRLKYESGVHRVQRVPETESQGRVHTSTVTVAVLPEAEE-VELDLNEERDIKME 225

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +R+SGAGGQH+N T SAVR+ HIPTG VV+CQ ERSQ +N+ +A  MLRAKL + +++ 
Sbjct: 226 VFRSSGAGGQHINKTSSAVRLIHIPTGTVVECQNERSQFQNRDKALKMLRAKLLDEKVRA 285

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +E    I  + ++++G G    +IR+Y   P   + D R  +       +L+G+LD+ + 
Sbjct: 286 QEN--EIASNRRSQVGTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVID 342

Query: 349 A 349
           A
Sbjct: 343 A 343


>gi|158334426|ref|YP_001515598.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
 gi|189039957|sp|B0C424|RF1_ACAM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158304667|gb|ABW26284.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
          Length = 363

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 133/206 (64%), Gaps = 6/206 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AGAGG E+  WA  L+R+Y+++AE +K++ + L    GE  G K A L I
Sbjct: 112 DEKNIMLEIRAGAGGDEASIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   +++ R HTS +++ V P VDD +EIEI   D  + T
Sbjct: 172 QGERVYSKLKYEAGVHRVQRVPATEASGRVHTSTATVAVMPEVDD-VEIEIDPKDIEMST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +NK +A  +LRAKLYE+ELQ  
Sbjct: 231 ARSGGAGGQNVNKVETAVDLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQ-- 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSY 315
           E+ A++    ++++G G    +IR+Y
Sbjct: 289 EQQASVTSMRRSQVGTGARSEKIRTY 314


>gi|304407781|ref|ZP_07389432.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
 gi|304343264|gb|EFM09107.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
          Length = 358

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/244 (37%), Positives = 150/244 (61%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L RMY ++A+ + ++ E +++++ +  G K    +I
Sbjct: 106 DDKNVIVEIRGAAGGDEAALFAYDLYRMYNKYADSQGWRVELMDMNESDLGGFKEVVFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ RI   +S  R HTS S++ V P +++ ++IEI + D RIDT
Sbjct: 166 IGKGAYSKLKFESGAHRVQRIPATESGGRIHTSTSTVAVMPEIEE-VDIEIHDKDIRIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+ H+PTG++  CQ  +SQ++NKA+A  +LRA++Y  E+ ++
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIY--EIHRQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A      K+++G G    +IR+Y   P   V D R  +       +++GD+++ ++ 
Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNY-PQSRVTDHRIGLTLHRLDAIMNGDIEEIVQ- 340

Query: 350 TLAI 353
           TL I
Sbjct: 341 TLTI 344


>gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
          Length = 352

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +EI I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEISINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|224048051|ref|XP_002187712.1| PREDICTED: mitochondrial translational release factor 1-like
           [Taeniopygia guttata]
          Length = 421

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 136/224 (60%), Gaps = 7/224 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S E D +D  +EV AG GG E+  + + +  MY R+A  +K+K E LE    E  G++
Sbjct: 155 IPSEETDESDLVMEVTAGVGGQEAMLFTSEIFDMYQRYAAYKKWKFEVLEYFPSELGGLR 214

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A   I G  AY ++K E GVHR+ R+   +   R HTS  ++ + P   + + ++I+  
Sbjct: 215 HAVASIAGLEAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MRLQINPK 273

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RI+T RASGAGGQHVNTTDSAVRI HIPTG+V +CQQERSQ +NK +A  ML AKLY 
Sbjct: 274 DLRIETKRASGAGGQHVNTTDSAVRIVHIPTGIVSECQQERSQIRNKEKAMQMLCAKLYN 333

Query: 287 LELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLR 327
            +L+  EE      + K +IG  GR  +IR+Y   P   + D R
Sbjct: 334 AKLE--EETKKRNYARKIQIGTKGRSEKIRTYNF-PQDRITDHR 374


>gi|78187994|ref|YP_378332.1| peptide chain release factor 1 [Chlorobium chlorochromatii CaD3]
 gi|119361520|sp|Q3AUE2|RF1_CHLCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78170193|gb|ABB27289.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           chlorochromatii CaD3]
          Length = 357

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/281 (36%), Positives = 162/281 (57%), Gaps = 16/281 (5%)

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           AL E +   LQET   L Q +K+ +       L   EADS +  +E+ AG GG E+  +A
Sbjct: 75  ALAEAEVDELQETVAELEQGLKILL-------LPKEEADSRNVIIEIRAGTGGDEASLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             L RMY R+AE++ ++ + L+ ++     G K   L I G N +G +K E GVHR+ R+
Sbjct: 128 ADLTRMYQRYAEQKGWQYKVLDYNESSVPGGFKEMILEISGNNVFGTMKYESGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  S+ V P  ++ +++EI   D R DTYR+ G GGQ+VN  ++AVRIT
Sbjct: 188 PDTEAQGRIHTSAVSVAVLPEAEE-VDVEIRRDDLRFDTYRSGGKGGQNVNKVETAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+V  CQ+ERSQ +NK +A  MLR KLY+++L ++++     +  +T +  G    
Sbjct: 247 HMPTGIVAACQEERSQLQNKERAMQMLRTKLYDIQLAEQQQ--QRADLRRTMVATGDRSA 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R      +   ++ G+L + ++A +
Sbjct: 305 KIRTYNY-PQSRVTDHRIGFTSHALPQIMQGELHEVIEALI 344


>gi|225436757|ref|XP_002269884.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086617|emb|CBI32252.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 191/345 (55%), Gaps = 27/345 (7%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP +  N  E + L +    LD  +S  K  +D  C+  +    AL ++D    
Sbjct: 63  LSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKD--CEKQLEEAKALAKEDGI-- 118

Query: 86  QETSDNLQRIKLEV-----EYKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWA 134
              +D  + I  E+     + K+ E       L S   DS +  LEV AG GG E+  WA
Sbjct: 119 --DADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDEAGIWA 176

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+RMY +++E+  +K   +   + E+ G K+  L +KG   Y  LK E GVHR+ R+ 
Sbjct: 177 GDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRVQRVP 236

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ + P  D+ +E+ I   D  + T R+ GAGGQ+VN  ++AV + H
Sbjct: 237 QTETQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFH 295

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+ + C +ER+Q +N+++A  +LRAKLYE+++++++E+  I    K+++G G    +
Sbjct: 296 KPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQEL--IRNQRKSQVGTGARAEK 353

Query: 312 IRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y  +  ++    L+ N E TS    LDGD++  +++ +A+++
Sbjct: 354 IRTYNYKDNRVTDHRLKMNFELTS---FLDGDIETAVQSCVAMEQ 395


>gi|311033344|ref|ZP_07711434.1| peptide chain release factor 1 [Bacillus sp. m3-13]
          Length = 356

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 183/347 (52%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E   ++++L D
Sbjct: 1   MFDRLQAVEMRYEKLTELLSDPEVISDTKKLREYSKEQSDIQETVEAYREYKAVKEQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  +  +  +    LL  +  D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDADMREMVKEEIAELEEQQENLADRLHILLLPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEAQGWKTEVMEAASTGVGGYKEIIFMITGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ +EIEI + D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIEIHDKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPT  VV CQ E+SQ KNK +A  +LRA++Y+ + Q RE  A    + K  +G
Sbjct: 240 SAVRLTHIPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-REVQAEYDANRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       +L G L + + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLQEVIDALI 343


>gi|227890652|ref|ZP_04008457.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
 gi|227867590|gb|EEJ75011.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
          Length = 360

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 173/298 (58%), Gaps = 12/298 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116
           KE+  ++ D+  +L   L+++  S+++E   N   +++KLE E K    LL  +  D  +
Sbjct: 55  KEVTQQISDDEEMLSDGLDDEMASLVKEELSNAKDEKVKLEEEIKIL--LLPKDPNDDKN 112

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G +
Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  LK E G HR+ RI   +S  R HTS +++ V P  +D +EIE+   D R+D YR+S
Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q  +E +
Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               + K+ +G G    +IR+Y   P   V D R  +       +++G+L+D + A +
Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALI 346


>gi|229819782|ref|YP_002881308.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
 gi|229565695|gb|ACQ79546.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
          Length = 373

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/336 (34%), Positives = 173/336 (51%), Gaps = 27/336 (8%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED----DCSILQ- 86
           DP +  +   A+ L R    L   +   +  +    D     ELA+E+D    +   LQ 
Sbjct: 33  DPAVHADAGRARALGRRYAELGRVVGAYRAWRRAADDATAAAELAVEDDAFASEVPALQV 92

Query: 87  ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              + +++L+R+ +  +            D  D  LE+ AG GG ES  +A  LLRMY R
Sbjct: 93  AEADAAEHLRRVLVPRDPD----------DGRDVILEIKAGEGGEESALFAGDLLRMYLR 142

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQGVHRLVRISPY 196
           +AE+R ++T+ LE  + +  G K   + +K   A       +  LK E GVHR+ R+   
Sbjct: 143 FAERRGWQTQVLEATESDLGGYKDVQVAVKSRGAAAPEDGVWAALKYEGGVHRVQRVPVT 202

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS + + V P VDD  E+EI   D RID +R+SG GGQ VNTTDSAVRITH+P
Sbjct: 203 ESQGRIHTSAAGVLVLPEVDDPGEVEIEGGDLRIDVFRSSGPGGQSVNTTDSAVRITHLP 262

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSY 315
           TG+VV  Q E+SQ +N+ QA  +LRA+L   + +     A     S+   +    +IR+Y
Sbjct: 263 TGIVVSMQNEKSQLQNREQAMRVLRARLLAAQQEAAAAEAAEARRSQVRTVDRSERIRTY 322

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              P   + D RT  +  +   VL GDLD  + + +
Sbjct: 323 NF-PENRIADHRTGYKAYNLDAVLAGDLDAVVASAV 357


>gi|90961566|ref|YP_535482.1| peptide chain release factor 1 [Lactobacillus salivarius UCC118]
 gi|119361553|sp|Q1WUD6|RF1_LACS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90820760|gb|ABD99399.1| Bacterial Peptide Chain Release Factor 1 [Lactobacillus salivarius
           UCC118]
          Length = 360

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 172/296 (58%), Gaps = 12/296 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116
           KE+  ++ D+  +L   L+++  S+++E   N   +++KLE E K    LL  +  D  +
Sbjct: 55  KEVTQQISDDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKIL--LLPKDPNDDKN 112

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G +
Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  LK E G HR+ RI   +S  R HTS +++ V P  +D +EIE+   D R+D YR+S
Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q  +E +
Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               + K+ +G G    +IR+Y   P   V D R  +       +++G+L+D + A
Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDA 344


>gi|308183875|ref|YP_003928008.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
 gi|308059795|gb|ADO01691.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
          Length = 352

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 177/304 (58%), Gaps = 20/304 (6%)

Query: 56  ISFIKEIQD--RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA- 112
           +S +++I++   L ++  L ELA EE    IL+     +Q+  LE   KQ   L+  +  
Sbjct: 55  LSVLEDIKENKELLEDKELSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPN 105

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ ++ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVTLNPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|217033144|ref|ZP_03438604.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298736978|ref|YP_003729508.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
 gi|216945129|gb|EEC23827.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298356172|emb|CBI67044.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
          Length = 352

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 172/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+  LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345


>gi|159027581|emb|CAO86953.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 366

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 185/341 (54%), Gaps = 15/341 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q  + L  +  DP +  N  E   L + R  L+  ++   EI  +  ++LI  +   +E 
Sbjct: 15  QTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTY-EIWQKSQEDLIGAKQIFKES 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDWA 134
                      L+  +LE +    E  L+         D  +  LE+ AG GG E+  WA
Sbjct: 74  ASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDEASIWA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+R+Y+++AE + +K   L     +  G K A L IKG N Y  LK E GVHR+ R+ 
Sbjct: 134 GDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKLKFEAGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +++ R HTS +++ + P VDD +E+ I   D  + T R+ GAGGQ+VN  ++AV + H
Sbjct: 194 LTEASGRVHTSTATVAIMPEVDD-VEVHIDPKDIELTTARSGGAGGQNVNKVETAVDLIH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+ V C +ERSQ +N+ +A  +LRAKLY+++LQ+++E   +    ++++G G    +
Sbjct: 253 KPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQEA--VSSMRRSQVGTGSRSEK 310

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y  +  ++  D R N E  S   +LDGD++D +++ +A
Sbjct: 311 IRTYNYKDNRLT-DHRLN-ENFSLDRILDGDIEDVIQSCIA 349


>gi|254446350|ref|ZP_05059826.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
 gi|198260658|gb|EDY84966.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
          Length = 408

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/241 (39%), Positives = 144/241 (59%), Gaps = 7/241 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E DS +  +E+ AGAGG E+  +A  L RMYTR AE++ ++ E +   +    G K    
Sbjct: 151 ETDSRNTIVEIRAGAGGDEASLFAADLYRMYTRLAERKGWRVEQMSASESGIDGFKEVIF 210

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   Y  LK E GVHR+ R+   +S  R HTS +++ V P  ++ +++EI+  D  +
Sbjct: 211 SITGEEVYKKLKLESGVHRVQRVPETESQGRIHTSTATVAVLPEAEE-VDVEINPQDLEV 269

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
            T RASGAGGQHVNTTDSA+ I H PTG+ V C  ERSQ KN+A+A  +L +++  L+++
Sbjct: 270 TTCRASGAGGQHVNTTDSAINIVHKPTGITVYCADERSQIKNRAKAMKVLYSRI--LQVK 327

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + EE +   E+ K ++G G    +IR+Y   P   + D R  +   S   V+DGD+++ +
Sbjct: 328 QEEERSKYAENRKKQVGTGDRSERIRTYNF-PQSRLTDHRIGLTLHSLPAVMDGDMEEIL 386

Query: 348 K 348
           +
Sbjct: 387 E 387


>gi|301299965|ref|ZP_07206192.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852447|gb|EFK80104.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 360

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 172/296 (58%), Gaps = 12/296 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116
           KE+  ++ D+  +L   L+++  S+++E   N   +++KLE E K    LL  +  D  +
Sbjct: 55  KEVTQQISDDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKIL--LLPKDPNDDKN 112

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G +
Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  LK E G HR+ RI   +S  R HTS +++ V P  +D +EIE+   D R+D YR+S
Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q  +E +
Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               + K+ +G G    +IR+Y   P   V D R  +       +++G+L+D + A
Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDA 344


>gi|301613862|ref|XP_002936423.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Xenopus (Silurana) tropicalis]
          Length = 420

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/255 (42%), Positives = 151/255 (59%), Gaps = 11/255 (4%)

Query: 102 KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           K+  S+L   GE++ ND  +EV AG GG E+  +   +  MY  +A  + +  + LE   
Sbjct: 145 KKIASILIKRGESEDNDLIMEVTAGVGGQEAMLFTAEMFDMYQHYAVHKNWSFDLLEYFS 204

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            E  G++ AT+ I G +AY  LK E GVHR+ R+   +   R HTS  ++ + P   + I
Sbjct: 205 SELGGLRHATVSIGGQDAYKCLKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPSE-I 263

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            + I+  D RI+T RASGAGGQHVNTTDSAVRI HIPTGVV +CQQERSQ KNK +A  +
Sbjct: 264 NLVINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVVSECQQERSQIKNKEKAMQV 323

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPS 336
           LRAKLY ++L+  EE +    + K +IG  GR  +IR+Y   P   V D R      +  
Sbjct: 324 LRAKLYTMKLE--EETSKRYNARKIQIGTRGRSEKIRTYNY-PQDRVTDHRIGKSLHNIE 380

Query: 337 DVLDGD--LDDFMKA 349
             L G+  LDD +++
Sbjct: 381 GFLFGEELLDDLIQS 395


>gi|167629003|ref|YP_001679502.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
 gi|238687991|sp|B0TI71|RF1_HELMI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167591743|gb|ABZ83491.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
          Length = 354

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/221 (41%), Positives = 141/221 (63%), Gaps = 7/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L RMY+R+A+++ ++TE L  +  +  G K   +LI
Sbjct: 105 DDKNVIIEIRAGTGGEEAALFAGDLYRMYSRFADRQGWRTELLSANYTDIGGFKEVIVLI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  A+  LK E GVHR+ R+   +S+ R HTS +++ V P  ++ +EIE++ ++ RID 
Sbjct: 165 EGQGAFSKLKFESGVHRVQRVPATESSGRIHTSAATVAVLPEAEE-VEIEVNPNELRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQHVN T+SAVRITH+PTG+VV CQ E+SQ KN+ +A  +LRA+L  LE  + 
Sbjct: 224 FCSSGAGGQHVNKTESAVRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARL--LEKARE 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           E+   +  + K+ +G G    +IR+Y   P   V D R  +
Sbjct: 282 EQHGEMASARKSMVGSGDRSERIRTYNF-PQGRVTDHRIGL 321


>gi|188526883|ref|YP_001909570.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
 gi|238691882|sp|B2URQ8|RF1_HELPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188143123|gb|ACD47540.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
          Length = 352

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINSSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|329939826|ref|ZP_08289127.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
 gi|329301396|gb|EGG45291.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
          Length = 361

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/254 (40%), Positives = 146/254 (57%), Gaps = 16/254 (6%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158

Query: 172 IK-------------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +K             G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ 
Sbjct: 159 VKTKPHGVSQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE- 217

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +++EI+ SD RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  
Sbjct: 218 VDVEINPSDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALR 277

Query: 279 MLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +LR++L     ++ E+ A     S+   +    +IR+Y   P   + D R   +  +   
Sbjct: 278 ILRSRLLAAAQEEAEKEAADARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQ 336

Query: 338 VLDGDLDDFMKATL 351
           VLDGDLD  ++A +
Sbjct: 337 VLDGDLDAVIQACV 350


>gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|299537972|ref|ZP_07051258.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
 gi|298726554|gb|EFI67143.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
          Length = 358

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 190/347 (54%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E   ++++L D
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKSVKEQLVD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127
              +L+   + D   +++E  + L+  + E+E +    L+  + + N +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V++ +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVEE-VDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ ++ +Q+ ++   I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQK--EIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDALI 343


>gi|304311492|ref|YP_003811090.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
 gi|301797225|emb|CBL45445.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
          Length = 362

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 183/319 (57%), Gaps = 17/319 (5%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKL 97
           + L +E   L+  ++   + +  L D  +  +L +E+ D  + +  ++ L     QR + 
Sbjct: 36  RKLSQEYAELEPVVTCFADYRKVLADITLARQL-MEDSDPEMREMGAEELRTGQAQRDQF 94

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           E++ ++   L     D  + YLE+ AG GG E+  +A  L RMY+R+AE   ++ E +  
Sbjct: 95  ELDLQKL-MLPKDPNDGRNVYLEIRAGTGGDEAAIFAGDLFRMYSRYAESCGWRVEVISE 153

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
           H+GE  G K     + G + Y  LK E G HR+ R+   ++  R HTS  ++ V P  D+
Sbjct: 154 HEGEHGGYKEIISRVSGDSVYSKLKFESGAHRVQRVPVTEAQGRIHTSACTVAVLPEADE 213

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
             +I+I   D ++DTYR++GAGGQHVNTTDSAVR+TH+PTG VV+CQ+ERSQHKN+A+A 
Sbjct: 214 IGDIDIRPEDLKMDTYRSTGAGGQHVNTTDSAVRLTHLPTGTVVECQEERSQHKNRAKAL 273

Query: 278 NMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
            +LRA+L     + Q R+      E+ +  +G G    +IR+Y   P   + D R N+  
Sbjct: 274 ALLRARLLSNAQDAQTRQ----TSEARRQLVGSGDRSERIRTYNF-PQGRLTDHRINLTL 328

Query: 333 TSPSDVLDGDLDDFMKATL 351
              +++++GDL + +++ +
Sbjct: 329 YRLNEIVEGDLSEVVQSLM 347


>gi|224373415|ref|YP_002607787.1| peptide chain release factor 1 [Nautilia profundicola AmH]
 gi|254790893|sp|B9L5Z9|RF1_NAUPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|223590043|gb|ACM93779.1| peptide chain release factor 1 [Nautilia profundicola AmH]
          Length = 355

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/207 (43%), Positives = 130/207 (62%), Gaps = 8/207 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +   LL+ Y R+A+ + +K E +     +  G K   LLI
Sbjct: 104 DDKNIFLEIRAGTGGDEAALFVGDLLKAYLRYADNKGWKVEIVSESKSDAGGYKEIILLI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + Y  LK E G HR+ RI   +S  R HTS  ++ + P VDD ++IE+   D +I+ 
Sbjct: 164 KGESVYSRLKYEGGTHRVQRIPATESQGRIHTSAVTVAIMPEVDD-VDIELDPKDIKIEV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
            RA GAGGQHVN T+SAVR+THIPTG+ V  Q ERSQ +NK +A  +L+A+++E LE   
Sbjct: 223 MRAGGAGGQHVNKTESAVRMTHIPTGITVSMQDERSQQRNKEKAMQILKARVFEKLE--- 279

Query: 292 REEIANIGESSKTEIGWG---RQIRSY 315
            E +A IGE+ K+++G G    +IR+Y
Sbjct: 280 NERLAAIGEARKSQVGSGDRSERIRTY 306


>gi|261837535|gb|ACX97301.1| peptide chain release factor RF-1 [Helicobacter pylori 51]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|317181378|dbj|BAJ59162.1| peptide chain release factor 1 [Helicobacter pylori F57]
 gi|332672916|gb|AEE69733.1| peptide chain release factor RF1 [Helicobacter pylori 83]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|308062940|gb|ADO04827.1| peptide chain release factor 1 [Helicobacter pylori Sat464]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|217034576|ref|ZP_03439984.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
 gi|216942931|gb|EEC22416.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|169838094|ref|ZP_02871282.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division
           TM7 single-cell isolate TM7a]
          Length = 190

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/171 (51%), Positives = 119/171 (69%), Gaps = 4/171 (2%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           M+TR+AE+ ++KTE +E ++    G+K  T LIKG  AY  LK E GVHR+ R+   +S+
Sbjct: 1   MFTRYAERNRWKTEIIEKNEIGVGGLKEVTFLIKGHGAYSRLKFESGVHRVQRVPATESS 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P +DD  E+EI+ SD +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+
Sbjct: 61  GRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGL 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           VV  Q  RSQ KNK  A  +L +KLYE+E +K R  + N     ++++G G
Sbjct: 121 VVTSQDGRSQIKNKEAAMKVLVSKLYEMECEKQRSAVEN---ERRSQVGSG 168


>gi|208434043|ref|YP_002265709.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
 gi|238058715|sp|B5Z680|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|308177036|ref|YP_003916442.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
 gi|307744499|emb|CBT75471.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
          Length = 357

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 158/291 (54%), Gaps = 21/291 (7%)

Query: 80  DDCSILQETSDNLQRIKLEV-----EYKQFESLLS------GEADSNDAYLEVHAGAGGT 128
           DD    QE +D       EV     E  Q E  L        E D  +  LEV  G GG 
Sbjct: 56  DDLEAAQEMADEDPDFAEEVQALTEELPQLEEKLRRLLIPRDENDGRNVILEVKGGEGGD 115

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLK 182
           E+  +A  LLRMYTR+AE + +K E +  ++ +  G K A + IKG         Y  LK
Sbjct: 116 EAALFAADLLRMYTRFAEHKGWKVEMISFNESDLGGYKDAQVAIKGNSNDPAEGVYAQLK 175

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS + + V P VD+  E++I ++D +ID YR+SG GGQ 
Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEEVDIHQNDLKIDVYRSSGPGGQS 235

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--YELELQKREEIANIGE 300
           VNTTDSAVRITH+PTG+VV  Q E+SQ +N+  A  +LR++L  ++ E+  +E  A    
Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQIQNREAAMRVLRSRLLAHQQEIIDKENSAQRAS 295

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +T +    +IR+Y   P   + D RT  +  +   V+DGDL   +++ +
Sbjct: 296 QIRT-MDRSERIRTYNY-PENRIADHRTGYKAYNLDAVMDGDLQPVVESCI 344


>gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSKLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|149183883|ref|ZP_01862274.1| peptide chain release factor 1 [Bacillus sp. SG-1]
 gi|148848402|gb|EDL62661.1| peptide chain release factor 1 [Bacillus sp. SG-1]
          Length = 253

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 143/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E +     G K    +I
Sbjct: 3   DDKNVIMEVRGAAGGDEAALFAGDLYRMYSRFAEAQGWKTEVMEANSTGVGGYKEIIFMI 62

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ R+   +S  R HTS +++   P  ++ +EI+I E D R+DT
Sbjct: 63  NGNGAYSKMKYENGAHRVQRVPETESGGRIHTSTATVACLPEAEE-VEIDIHEKDIRVDT 121

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+ + Q R
Sbjct: 122 FASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-R 179

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A    + K+ +G G    +IR+Y   P   V D R  +       +L+G +D+ + A
Sbjct: 180 EVQAEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVIDA 238

Query: 350 TL 351
            +
Sbjct: 239 LI 240


>gi|308061372|gb|ADO03260.1| peptide chain release factor 1 [Helicobacter pylori Cuz20]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|295400673|ref|ZP_06810650.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977254|gb|EFG52855.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 358

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 191/347 (55%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +F+   AV+ R   LN    DP +  +  + +   +E+  L+  +   +E +    +L D
Sbjct: 1   MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVCKQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E  D L++ + E+  K    LL  +  D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P +++ IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALI 343


>gi|311743960|ref|ZP_07717766.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
 gi|311313090|gb|EFQ83001.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
          Length = 353

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 175/333 (52%), Gaps = 23/333 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI- 84
           L  K  DP +  + ++AK + +    L   I   +E Q    D     EL +++D   + 
Sbjct: 15  LERKMADPSVHADPVQAKRIGQRYAELTAVIRTYREWQQTGDDLQAARELRMDDDVVQLE 74

Query: 85  --LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
             L E  + LQR+ +  +            D+ D  LE+  G GG ES  +A  LLRMYT
Sbjct: 75  ARLPELGERLQRLLVPRD----------PGDAKDVILEIKGGEGGEESALFAADLLRMYT 124

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISP 195
           R+AE+R ++ + L+  +    G KS T  +K       G      LK E GVHR+ R+  
Sbjct: 125 RFAERRGWRVDILDSTESALGGYKSVTAAVKARSTPEPGEAPGALLKFEGGVHRVQRVPV 184

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS + + V P  +D +++EI +SD RID YR+SG GGQ VNTTDSAVRITH+
Sbjct: 185 TESQGRIHTSAAGVLVLPEAED-VDVEIHDSDLRIDVYRSSGPGGQSVNTTDSAVRITHV 243

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314
           PTGVV  CQ E+SQ +NK QA  +LRA+L E      +  A+    S+   +    ++R+
Sbjct: 244 PTGVVASCQNEKSQLQNKEQALRILRARLLEAAQATADAEASDARRSQIRTVDRSERVRT 303

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           Y   P   + D RT  +  +   V+DG L+D +
Sbjct: 304 YNF-PENRISDHRTGFKAYNLDAVMDGGLEDVI 335


>gi|260663282|ref|ZP_05864173.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
 gi|260552134|gb|EEX25186.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
          Length = 362

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 18/350 (5%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L   +   +  KE+   + D
Sbjct: 6   IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124
           +    E+  EE D  +++ T + L   K      Q E  +L    D ND     +E+   
Sbjct: 66  DT---EMLREESDPDLVEMTKEELNETKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 122

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK E
Sbjct: 123 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 182

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P  +D +++++   D R+D YR+SGAGGQH+N
Sbjct: 183 NGAHRVQRIPATESAGRVHTSTATVGVMPEAED-VDVDLDPKDIRVDVYRSSGAGGQHIN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q  +E +      K 
Sbjct: 242 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQ--QEQSEYDAQRKN 299

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +
Sbjct: 300 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLI 348


>gi|167752375|ref|ZP_02424502.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
 gi|167660616|gb|EDS04746.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
          Length = 361

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 138/236 (58%), Gaps = 7/236 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+  G GG E+  +A  L+RMYT++ E + +K E     +G   G K   + +
Sbjct: 111 DAKNAIVEIRGGTGGDEAAIFAGDLMRMYTKYIESKGWKYEITSFSEGTAGGYKEVVMKV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  ++EIS +D R D 
Sbjct: 171 TGNNVYGTLKYESGVHRVQRVPQTETQGRVHTSAASVAVLPEAEE-FDVEISMNDIRKDI 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ASG GGQ VNTT SA+R+THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K 
Sbjct: 230 FCASGPGGQSVNTTYSAIRLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKY 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
             +  I    KT +  G    +IR+Y   P   + D R N    + S  +DGD+ D
Sbjct: 290 --LDEIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQD 342


>gi|224131216|ref|XP_002321029.1| predicted protein [Populus trichocarpa]
 gi|222861802|gb|EEE99344.1| predicted protein [Populus trichocarpa]
          Length = 416

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 187/339 (55%), Gaps = 27/339 (7%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP +  N  E + L +    LD  +S  K  +D  C+ ++    AL ++D +  
Sbjct: 68  LSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKD--CEKMLEDTRALAKEDGN-- 123

Query: 86  QETSDNLQRIKLEVE-----YKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWA 134
               D  + I  E+E      KQ E       L S   D+ +  LEV AG GG E+  WA
Sbjct: 124 --DEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEAGLWA 181

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+RMY R++E+  +K   +   + E+ G K+  + +KG + Y  LK E GVHR+ R+ 
Sbjct: 182 GDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRVQRVP 241

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ + P VD+ +E+ I   +  + T R+ GAGGQ+VN  ++AV + H
Sbjct: 242 QTEAQGRVHTSTATVAIMPEVDE-VEVVIDPKEYELTTARSGGAGGQNVNKVETAVDLIH 300

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+ + C +ER+Q +N+ +A  +LRAKLYE+++++++E  +I    K ++G G    +
Sbjct: 301 KPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQE--SIRNQRKMQVGTGARAEK 358

Query: 312 IRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKA 349
           IR+Y  +  ++    L+ N E TS    L GD+++ ++A
Sbjct: 359 IRTYNYKDNRVTDHRLKVNFELTS---FLAGDIENAVQA 394


>gi|213421201|ref|ZP_03354267.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 148

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/145 (61%), Positives = 111/145 (76%), Gaps = 1/145 (0%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +
Sbjct: 1   SSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQND 60

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL   + +KDL
Sbjct: 61  RSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDSR-IKDL 119

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           RT +E  +   VLDG LD F++A+L
Sbjct: 120 RTGVETRNTQAVLDGSLDQFIEASL 144


>gi|315926256|ref|ZP_07922444.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315620443|gb|EFV00436.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 173

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/146 (57%), Positives = 105/146 (71%), Gaps = 2/146 (1%)

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVRISP+D+  RR TSF+ + V PVV+++  ++I  SD R+D + ASG GGQ VNT
Sbjct: 1   GTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPGSDLRVDVFHASGPGGQGVNT 60

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +       
Sbjct: 61  TDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLKSEG 118

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIE 331
             WG Q+RSYVL PYQMVKDLRTN E
Sbjct: 119 NSWGAQMRSYVLHPYQMVKDLRTNHE 144


>gi|239928894|ref|ZP_04685847.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291437221|ref|ZP_06576611.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291340116|gb|EFE67072.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
          Length = 355

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 145/248 (58%), Gaps = 10/248 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158

Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +++EI+
Sbjct: 159 VKARGQVEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDVEIN 217

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L
Sbjct: 218 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRL 277

Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             +  ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLDGDL
Sbjct: 278 LAMAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDL 336

Query: 344 DDFMKATL 351
              ++A +
Sbjct: 337 GAVIQACV 344


>gi|182415309|ref|YP_001820375.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
 gi|177842523|gb|ACB76775.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
          Length = 383

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 184/352 (52%), Gaps = 14/352 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  L D     +RL  L+ +  +P  + N   A  + RE+Q L   ++  +E  DRL
Sbjct: 6   LESMDELPDLAPFQRRLDELDAQMAEPTFYANARRAAEVSREQQKLQQLVADYQEY-DRL 64

Query: 67  CDNL-----ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLE 120
                    +  + A + D   + Q     L+R +  +      +++  +  DS +  +E
Sbjct: 65  GREAAEAAALGKDPAADPDLRELAQAELPELERRRAALRQAVLLAMIPPDPTDSRNTVME 124

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG GG E+  +A  L RMY+R+A+ + +K + +     E  G K    LI G + Y  
Sbjct: 125 IRAGTGGDEASLFAADLFRMYSRYADGQGWKIQPMSSSMSERGGFKEVIFLISGTDVYKR 184

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   ++N R HTS  ++ V P  ++ ++++I   +  I   RASG GG
Sbjct: 185 LKFESGVHRVQRVPVTEANGRIHTSTVTVAVLPEAEE-VDVQIDPQELEITVTRASGPGG 243

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAV+I H PTG++V C  ERSQ KNKA+A  +LR++L  L+ ++ EE A    
Sbjct: 244 QGVNTTDSAVQIVHKPTGLIVTCADERSQIKNKAKALTVLRSRL--LQRREEEERAKYAA 301

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           + +++IG G    +IR+Y   P   + D R  +   +   VL+G +D  + A
Sbjct: 302 TRRSQIGSGDRSERIRTYNF-PQNRLTDHRIGLTLYNLPQVLEGGIDPIIAA 352


>gi|72162818|ref|YP_290475.1| peptide chain release factor 1 [Thermobifida fusca YX]
 gi|119361632|sp|Q47M70|RF1_THEFY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71916550|gb|AAZ56452.1| bacterial peptide chain release factor 1 (bRF-1) [Thermobifida
           fusca YX]
          Length = 355

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 176/335 (52%), Gaps = 18/335 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  +  +A+ L +    L   ++  +E+     D     ELA E  D S  
Sbjct: 13  LEQQLADPAVHADQAQARTLAKRYSQLTPIVATYRELNRVESDIETAQELAAE--DPSFA 70

Query: 86  QETSD-NLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            E      QR +L    ++  +LL      D  D  LEV AG GG ES  +A+ L+RMY 
Sbjct: 71  DEAKQLAAQREEL---VQRLRTLLIPRDPNDDKDVILEVKAGEGGEESALFASDLVRMYL 127

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISP 195
           R+AE++ +KTE +     +  G K  T+ IK       G   +  LK E GVHR+ R+  
Sbjct: 128 RYAERQGWKTEIISATHSDLGGYKDITIAIKNRGTVEPGQGVWHRLKFEGGVHRVQRVPV 187

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS   + V P  ++ IE+EI+ESD RID YR+SG GGQ VNTTDSAVRITH+
Sbjct: 188 TESQGRIHTSAVGVLVLPEAEE-IEVEINESDLRIDVYRSSGPGGQSVNTTDSAVRITHL 246

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314
           PTG+VV CQ E+SQ +NK QA  +LRA+L        E  A     S+   +    ++R+
Sbjct: 247 PTGIVVSCQNEKSQLQNKEQALRVLRARLLAEAQAAAEAEAAAERRSQVRTVDRSERVRT 306

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           Y   P   + D R   +  +   VLDG+LD  ++A
Sbjct: 307 YNF-PENRISDHRVGYKAYNLDQVLDGELDGVIQA 340


>gi|290957365|ref|YP_003488547.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
 gi|260646891|emb|CBG69988.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
          Length = 358

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 145/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINANDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           G+LD  ++A +
Sbjct: 337 GELDAVIQACV 347


>gi|311898376|dbj|BAJ30784.1| putative peptide chain release factor 1 [Kitasatospora setae
           KM-6054]
          Length = 358

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 146/247 (59%), Gaps = 10/247 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LEV AG GG ES  +A  LLRMY R+AE+  +KTE ++ ++ +  G K  ++ +
Sbjct: 100 DDKDVILEVKAGEGGEESALFAGDLLRMYLRYAERVGWKTELIDANESDLGGYKDVSVAV 159

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +E+EI  
Sbjct: 160 KTRGSAEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEVEIHA 218

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR++L 
Sbjct: 219 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLL 278

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               ++ E  A+    S+   +    +IR+Y   P   + D RT  +  +   VLDGDL+
Sbjct: 279 AAAQEEAEREASDARRSQVRTVDRSERIRTYNF-PENRISDHRTGFKSYNLDQVLDGDLN 337

Query: 345 DFMKATL 351
             +++ +
Sbjct: 338 AVIQSCV 344


>gi|227514467|ref|ZP_03944516.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|227087153|gb|EEI22465.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|299782948|gb|ADJ40946.1| Peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT
           5716]
          Length = 362

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 18/350 (5%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L   +   +  KE+   + D
Sbjct: 6   IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124
           +    E+  EE D  +++ T + L   K      Q E  +L    D ND     +E+   
Sbjct: 66  DT---EMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 122

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK E
Sbjct: 123 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 182

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P  +D +++++   D R+D YR+SGAGGQH+N
Sbjct: 183 NGAHRVQRIPATESAGRVHTSTATVGVMPEAED-VDVDLDPKDIRVDVYRSSGAGGQHIN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q  +E +      K 
Sbjct: 242 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQ--QEQSEYDAQRKN 299

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +
Sbjct: 300 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLI 348


>gi|89095600|ref|ZP_01168494.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
 gi|89089346|gb|EAR68453.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
          Length = 357

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 186/351 (52%), Gaps = 20/351 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           ++D   AV+ R   LN    DP +  +  + +   +E+  +   +      KE++ +  D
Sbjct: 1   MYDRLQAVEDRYERLNELLSDPEIVNDTKKLREYSKEQSGIQETVEAYREYKEVRGQYQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQ-RIK-LEVEYKQFESLLSGEADSND---AYLEVHA 123
              +LE  L+ +   +++E    L+ R++ LE   K    +L    D ND     +E+  
Sbjct: 61  AKAMLEEKLDAEMREMVKEEIGELEDRVEALEARLK----ILLIPKDPNDDKNVIMEIRG 116

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L RMY+R+AE + +KT+ +E       G K    +I G  A+  LK 
Sbjct: 117 AAGGDEAALFAGDLYRMYSRFAEVQGWKTDVIEASSTGVGGYKEIIFIINGNGAFSKLKF 176

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P  ++ +EIEI + D R+DT+ +SG GGQ V
Sbjct: 177 ENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIEIHDKDIRVDTFASSGPGGQSV 235

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   +  K
Sbjct: 236 NTTMSAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQQRK 293

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +G G    +IR+Y   P   V D R  +       +L G LD+ + A +
Sbjct: 294 SAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALI 343


>gi|320008549|gb|ADW03399.1| peptide chain release factor 1 [Streptomyces flavogriseus ATCC
           33331]
          Length = 358

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI  +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L    +    +E +++  S    +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDAVIQACV 347


>gi|134102728|ref|YP_001108389.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291007815|ref|ZP_06565788.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915351|emb|CAM05464.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 357

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 185/339 (54%), Gaps = 14/339 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  +   A+ L R    L   +   KE+     D     ELA   D+    
Sbjct: 16  LERRLADPEVHADQAGARKLGRRYAELTPVVRCSKELDQARSDLATARELA---DEDPAF 72

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E +++L      +E K  E LL  +  D++D  LEV +G GG ES  +A  LLRMY R+
Sbjct: 73  AEEAESLAESVPALEAKLTELLLPRDPHDASDVLLEVKSGEGGEESALFAGDLLRMYLRF 132

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIK------GPNA-YGWLKGEQGVHRLVRISPYD 197
           AE++ ++TE L+  + +  G K AT+ +K      GP+  +  LK E GVHR+ R+   +
Sbjct: 133 AERQGWRTEILDATESDLGGYKDATVAVKTKAGDTGPDGVWSKLKFEGGVHRVQRVPVTE 192

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS + + +     + +E+E+ E D RID YR+SG GGQ VNTTDSAVRITH+PT
Sbjct: 193 SQGRVHTSAAGV-LVYPEPEEVEVEVDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHLPT 251

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYV 316
           G+VV CQ E+SQ +NK +A  +LRA+L  L  ++ E  A+    S+   +    +IR+Y 
Sbjct: 252 GIVVSCQNEKSQLQNKIRAIQVLRARLQALAEEEAEREASETRRSQVRTVDRSERIRTYN 311

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             P   + D R N +  +   VLDGDLD  + A +A  +
Sbjct: 312 F-PENRISDHRVNYKAYNLDQVLDGDLDGVLGALVAADR 349


>gi|282861117|ref|ZP_06270182.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
 gi|282563775|gb|EFB69312.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
          Length = 358

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI  +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L    +    +E +++  S    +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDAVIQACV 347


>gi|295836498|ref|ZP_06823431.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
 gi|197699008|gb|EDY45941.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
          Length = 357

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 145/250 (58%), Gaps = 12/250 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE L+  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVA 158

Query: 172 IK---------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           +K         G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++E
Sbjct: 159 VKTKGNANPEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDVE 217

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR+
Sbjct: 218 INPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRS 277

Query: 283 KLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLDG
Sbjct: 278 RLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDG 336

Query: 342 DLDDFMKATL 351
           +LD  ++A +
Sbjct: 337 ELDAVIQACV 346


>gi|86606113|ref|YP_474876.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
 gi|119361625|sp|Q2JUK1|RF1_SYNJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86554655|gb|ABC99613.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
          Length = 361

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L RMYTR+AEK  +      + +GE  G K A L I
Sbjct: 113 DEKNIMLEIRAGTGGEEAALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEI 172

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS +++ V P VD+ +E+ I   D  I T
Sbjct: 173 RGDQVYSKLKFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDE-VEVVIDPKDIEIKT 231

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++LQ  
Sbjct: 232 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQ-- 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A+I  + + ++G G    +IR+Y  +  + V D R N +      +L+G+LD+ ++A
Sbjct: 290 EQQASISSARRMQVGTGSRSEKIRTYNYKDNR-VTDHRLN-QNFLLEPILEGELDELIQA 347

Query: 350 TLAI 353
            + +
Sbjct: 348 CIGL 351


>gi|256833004|ref|YP_003161731.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
 gi|256686535|gb|ACV09428.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
          Length = 361

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 143/247 (57%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS D  LE+ AG GG ES  +A  LLRMY R+AE++ ++TE +   + +  G K   + +
Sbjct: 103 DSRDVILEIKAGEGGAESALFAADLLRMYLRYAERQGWRTEIIGATESDLGGYKDVQVAV 162

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K      P    W  LK E GVHR+ R+   +S  R HTS   + V+P V+D  E+EI +
Sbjct: 163 KARGQVTPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAVGVLVFPEVEDEGELEIDQ 222

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQ +N+ QA  +LRA+L 
Sbjct: 223 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVSMQNEKSQLQNREQAMRVLRARLL 282

Query: 286 -ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
              + +      ++  S    +    +IR+Y   P   + D RT  +  +   VLDGD+ 
Sbjct: 283 AARQEEAAAAAQDMRRSQVRTVDRSERIRTYNF-PENRIADHRTGFKSYNLDQVLDGDVQ 341

Query: 345 DFMKATL 351
             +++ +
Sbjct: 342 PVVQSAI 348


>gi|184154903|ref|YP_001843243.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
 gi|238692951|sp|B2GAT1|RF1_LACF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183226247|dbj|BAG26763.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
          Length = 360

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 18/350 (5%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68
           +FD   AV  R   LN    DP +  +      L +E   L   +   +  KE+   + D
Sbjct: 4   IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124
           +    E+  EE D  +++ T + L   K      Q E  +L    D ND     +E+   
Sbjct: 64  DT---EMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK E
Sbjct: 121 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P  +D +++++   D R+D YR+SGAGGQH+N
Sbjct: 181 NGAHRVQRIPATESAGRVHTSTATVGVMPEAED-VDVDLDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q  +E +      K 
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQ--QEQSEYDAQRKN 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +
Sbjct: 298 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLI 346


>gi|12045113|ref|NP_072924.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|255660257|ref|ZP_05405666.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|1350577|sp|P47500|RF1_MYCGE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1045950|gb|AAC71478.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|166078949|gb|ABY79567.1| peptide chain release factor 1 [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 359

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/322 (36%), Positives = 176/322 (54%), Gaps = 16/322 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL-QETSDNLQRIK----- 96
           K++ +E +H    I   KE+Q +L +N    E  L       L +E    L++IK     
Sbjct: 36  KVINKELKHKQPLIVKFKELQ-KLVENANEAEQILNNSSLKELHEEAKKELEKIKASLPS 94

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           LE E K F  L   E +  +  +E+   AGG ES  + + L  MY  +   + +  E  E
Sbjct: 95  LEEEIK-FLLLPVDENNQKNVIVEIRPAAGGDESCIFLSDLFNMYKNYCTSKNWTVELNE 153

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I      GI   +  + G + +  LK E GVHR+ R+   ++  R HTS  ++ V P ++
Sbjct: 154 IIPAS-VGINFVSFAVNGTDVFAKLKFESGVHRVQRVPLTEAKGRVHTSTVTVAVLPQLE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +EI I+ SD RIDTYRASGAGGQHVN T+SAVRITH+PTG+VV CQ+ +SQ  N+ +A
Sbjct: 213 E-VEITINPSDLRIDTYRASGAGGQHVNRTESAVRITHLPTGIVVACQEGKSQFSNRDKA 271

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             MLRAKL+E    K  +++   +  K+++G G    +IR+Y   P   + D R  +   
Sbjct: 272 MKMLRAKLWENAQNK--QLSTQADLRKSQVGSGERAEKIRTYNY-PQNRITDHRIKLTIN 328

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
             + V+ GDLD+ ++A  A +K
Sbjct: 329 KLNTVILGDLDEIIEALQADEK 350


>gi|317010358|gb|ADU84105.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7]
          Length = 352

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    ++R+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERVRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|227495018|ref|ZP_03925334.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
 gi|226831470|gb|EEH63853.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
          Length = 369

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 181/337 (53%), Gaps = 20/337 (5%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETS 89
           DP +  +  + + L +    L    S IK   D L      LE A E  ++D S   E  
Sbjct: 27  DPEVLADRTQQRKLAKRFSEL----SVIKNAADALSMAADDLEAAKEMAKEDSSFAAEIP 82

Query: 90  DNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           +    + LE  + +   +L     AD+++  LE+ AG GG ES  +A  L RMYTR+AE 
Sbjct: 83  E--MEVALEAAHARLVKILIPRDPADADNVILEIKAGEGGEESALFAAELARMYTRYAET 140

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNS 200
           + +K + L        G+K  +L I       P    W  LK E GVHR+ R+   +S  
Sbjct: 141 KGWKVKELSSTYTGLGGVKEVSLSIAAKSDVAPEDGVWAHLKFEGGVHRVQRVPVTESQG 200

Query: 201 RRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           R HTS   + V P V+D  E + I ++D RID +R+SG GGQ VNTTDSAVRITHIPTGV
Sbjct: 201 RIHTSAVGVLVTPEVEDDTEDLVIDQNDLRIDVFRSSGPGGQSVNTTDSAVRITHIPTGV 260

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318
           VV  Q E+SQ +NK  A  +LR++L +LE +K+E  A+   +S+   +    +IR+Y   
Sbjct: 261 VVSMQNEKSQLQNKEAAMRVLRSRLIQLEREKKEAEASAMRASQVRTVDRSERIRTYNF- 319

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   + D RT  +  + + VL+G+L   +++ + +++
Sbjct: 320 PENRIADHRTGYKAYNLATVLEGELGPVIESAIVLEE 356


>gi|323172435|gb|EFZ58072.1| peptide chain release factor 1 [Escherichia coli LT-68]
          Length = 227

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 134/215 (62%), Gaps = 6/215 (2%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+   +S 
Sbjct: 1   MYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+
Sbjct: 61  GRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYV 316
           VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G +    R+Y 
Sbjct: 121 VVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYN 178

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   V D R N+      +V++G LD  ++  +
Sbjct: 179 F-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 212


>gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
 gi|258604288|gb|EEW17526.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
          Length = 358

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+ +GAGG E+  +A  L RMY R+AE+  F TE L +++ +  G+K  TL I
Sbjct: 103 DGDDIVMEIKSGAGGEEAALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSI 162

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P+   A+   K E GVHR+ RI   +S  R  TS + + VYP  D+  ++ I + D
Sbjct: 163 RSKQPSRDGAWSEFKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVRITH+PT +VV CQ+ERSQ +N+A+A  +L A+L +L
Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQL 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           + ++ E  A  G +++   +    +IR+Y   P   V D R   +  +   VLDGDL+  
Sbjct: 283 KEEEAEAEAAEGRAAQIRTMDRSERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEAL 341

Query: 347 MKA 349
           + A
Sbjct: 342 LAA 344


>gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Corynebacterium jeikeium K411]
 gi|119361528|sp|Q4JUI9|RF1_CORJK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68264030|emb|CAI37518.1| peptide chain release factor RF-1 [Corynebacterium jeikeium K411]
          Length = 358

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+ +GAGG E+  +A  L RMY R+AE+  F TE L +++ +  G+K  TL I
Sbjct: 103 DGDDIVMEIKSGAGGEEAALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSI 162

Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             K P+   A+   K E GVHR+ RI   +S  R  TS + + VYP  D+  ++ I + D
Sbjct: 163 RSKQPSRDGAWSEFKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVRITH+PT +VV CQ+ERSQ +N+A+A  +L A+L +L
Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQL 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           + ++ E  A  G +++   +    +IR+Y   P   V D R   +  +   VLDGDL+  
Sbjct: 283 KEEEAEAEAAEGRAAQIRTMDRSERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEAL 341

Query: 347 MKA 349
           + A
Sbjct: 342 LAA 344


>gi|307722037|ref|YP_003893177.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306980130|gb|ADN10165.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 355

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +   L   YTR+A+ + +K E +     +  G K    LI
Sbjct: 104 DDRNIIVELRAGAGGDEAAIFVGDLFDAYTRYADLKGWKIELMSSSPSDAGGYKEVVALI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ V P VDD +EIEI+E+D +ID 
Sbjct: 164 KGEQVYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-VEIEINENDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQ VNTTDSAVRITH+P+G+VV  Q ++SQHKN+ +A  +L+A+LY+L++Q+ 
Sbjct: 223 MRSSGCGGQSVNTTDSAVRITHLPSGLVVTNQDQKSQHKNREKAMKVLKARLYDLQMQEA 282

Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           +  A        ++G G    +IR+Y   P   + D R N+     ++++ G  LD+ ++
Sbjct: 283 Q--AEDAAQRAAQVGTGDRSGRIRTYNY-PQNRISDHRINLTLYRLNEIMSGGLLDEIIE 339

Query: 349 ATLA 352
             +A
Sbjct: 340 PLIA 343


>gi|220913097|ref|YP_002488406.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
 gi|254790860|sp|B8HB03|RF1_ARTCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219859975|gb|ACL40317.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
          Length = 357

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 147/248 (59%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  LEV  G GG E+  +A  LLRMYTR+AE R +KTE +   + +  G K   + +
Sbjct: 100 DARNVILEVKGGEGGDEAALFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAV 159

Query: 173 KGPN------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG +       Y  LK E GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++
Sbjct: 160 KGSSNDPAEGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  Q+ +  A   E  K++I       +IR+Y   P   + D RT  +  +   V++GDL
Sbjct: 278 LAHQQEQIDAANSEQRKSQIRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDL 336

Query: 344 DDFMKATL 351
           +  +++ +
Sbjct: 337 EPVIQSAI 344


>gi|290982185|ref|XP_002673811.1| predicted protein [Naegleria gruberi]
 gi|284087397|gb|EFC41067.1| predicted protein [Naegleria gruberi]
          Length = 324

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/251 (41%), Positives = 151/251 (60%), Gaps = 19/251 (7%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR--KFKTEALEIHDGEEAGIKSAT 169
           + +++A +E+  G GG E+  +A  L +MY  +A KR  KF+  +L  ++G E G K   
Sbjct: 50  SPNSNAIIEIRPGTGGDEASLFAMELFKMYEFYATKRGWKFEVLSLSANNGGE-GCKEGI 108

Query: 170 LLIKGPN--------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
            LI G +         YG +K E GVHR+ R+   +S  R HTS +SI V P V ++ ++
Sbjct: 109 ALISGSSYGDDEGLGVYGCMKFESGVHRVQRVPATESQGRVHTSSASIVVLPEVTEA-DV 167

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I+ +D RIDT RASGAGGQHVNTTDSAVR+THIPTG VV    ERSQH+NK +A+ +L 
Sbjct: 168 KINLADVRIDTMRASGAGGQHVNTTDSAVRLTHIPTGTVVCIADERSQHRNKEKAFKILH 227

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           ++LY  + Q+ E+I  +    K +IG G    +IR+Y   P   + D R +  +     +
Sbjct: 228 SRLY--QKQQDEKIQKMSSERKEQIGSGDRSDKIRTYNF-PQDRITDHRISFSQFGLDKM 284

Query: 339 LDGD-LDDFMK 348
           +DG+ LD F +
Sbjct: 285 MDGEILDSFFE 295


>gi|29829454|ref|NP_824088.1| peptide chain release factor 1 [Streptomyces avermitilis MA-4680]
 gi|46576778|sp|Q82J70|RF1_STRAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29606562|dbj|BAC70623.1| putative peptide chain release factor 1 [Streptomyces avermitilis
           MA-4680]
          Length = 358

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGQGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI  +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDLD  ++A +
Sbjct: 337 GDLDAMIQACV 347


>gi|323339960|ref|ZP_08080227.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
 gi|323092602|gb|EFZ35207.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
          Length = 362

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 171/296 (57%), Gaps = 12/296 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEA-DSND 116
           K++  ++ D+  +L   L+++  ++++E  +    ++ KLE E K    LL  +  D  D
Sbjct: 57  KQVVQQIKDDEEMLSTGLDDEMAAMVKEELSDSKNEKQKLEQEIKIL--LLPKDPNDGKD 114

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L I G N
Sbjct: 115 LIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKN 174

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  LK E G HR+ R+   +S  R HTS +++ V P  +D +EI++   D R+D YR+S
Sbjct: 175 VWSKLKYESGAHRVQRVPVTESAGRVHTSTATVVVMPEEED-VEIDLDPKDIRVDVYRSS 233

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y  +  K +E +
Sbjct: 234 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVY--DYYKSQEQS 291

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              E+ K+ +G G    +IR+Y   P   V D R  +       +++G+LDD + A
Sbjct: 292 EYDENRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELDDVIDA 346


>gi|239982315|ref|ZP_04704839.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291454159|ref|ZP_06593549.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357108|gb|EFE84010.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 358

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 146/251 (58%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTELIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ I++
Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+++D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINQNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           G+LD  ++A +
Sbjct: 337 GELDAVIQACV 347


>gi|78358024|ref|YP_389473.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|119361534|sp|Q30X18|RF1_DESDG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78220429|gb|ABB39778.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 357

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 135/236 (57%), Gaps = 7/236 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+ AG GG E+  +A  L RMY R+AE   ++ E L   + +  G K    LI G   Y
Sbjct: 111 LEIRAGTGGEEAALFAADLFRMYLRYAEDMGWRVEVLSSSETDSGGFKEIIGLISGDKVY 170

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             +K E G HR+ R+   ++  R HTS +++ V P  D+ +E+++   D R D YR+SG 
Sbjct: 171 SRMKFESGTHRVQRVPATETQGRIHTSAATVAVMPEADE-VELDMKPEDLRFDVYRSSGP 229

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+THIPTG+ V CQ E+SQHKNKA+   +L ++L + +  KR E   +
Sbjct: 230 GGQSVNTTDSAVRVTHIPTGITVACQDEKSQHKNKAKGLKILASRLLQAQEDKRHE--EL 287

Query: 299 GESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E  ++ +G G    +IR+Y   P   + D R N+        ++G + D + A +
Sbjct: 288 AEQRRSLVGTGDRSGRIRTYNF-PQGRITDHRINLTLYKLDAFMEGQIGDMLDALI 342


>gi|314923482|gb|EFS87313.1| peptide chain release factor 1 [Propionibacterium acnes HL001PA1]
 gi|315092954|gb|EFT64930.1| peptide chain release factor 1 [Propionibacterium acnes HL060PA1]
 gi|315103525|gb|EFT75501.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA2]
          Length = 379

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMY R+AE+  + 
Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160

Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P   AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS
Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 330

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL D + A
Sbjct: 331 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 360


>gi|297626232|ref|YP_003687995.1| peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921997|emb|CBL56559.1| Peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 359

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 176/340 (51%), Gaps = 14/340 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q  + L  +  DP +  +   ++ + R    L   +  + E Q    D     ELA   D
Sbjct: 10  QEFADLEKQLADPAVVSDQARSRKVGRRYSELTGVVHALDEHQQLTEDLSAARELA---D 66

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLL 138
           D       +D +   +L+    +  +LL+     DSNDA +E+ +G GG ES  +A  LL
Sbjct: 67  DDPAFAAEADQIS-ARLDEVTDKLTALLAPRDPLDSNDAIMEIKSGEGGEESALFAGDLL 125

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHRLVRI 193
            MY  +AE+  + TE ++    +  G KS TL  +         YG LK E GVHR+ R+
Sbjct: 126 NMYQHFAEREGWSTEIIDAEPTDLGGFKSVTLAFRATGHDAQAPYGALKFEGGVHRVQRV 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS + + V P V++S EIEI+  D RID YR++G GGQ VNTTDSAVRIT
Sbjct: 186 PVTESQGRIHTSAAGVLVMPDVEES-EIEINPDDLRIDVYRSTGKGGQGVNTTDSAVRIT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQI 312
           H+PTGVVV  Q +RSQ +NK QA  +LRA+L     ++  + A     S+   +    +I
Sbjct: 245 HLPTGVVVTSQDQRSQLQNKEQALRVLRARLVAAAEEQAAQQAEQARKSQVRTVDRSERI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   + D R   +  +   VL G+L+  ++A  A
Sbjct: 305 RTYNF-PENRITDHRIGFKAHNLDAVLGGELEPLIEALQA 343


>gi|282853790|ref|ZP_06263127.1| peptide chain release factor 1 [Propionibacterium acnes J139]
 gi|282583243|gb|EFB88623.1| peptide chain release factor 1 [Propionibacterium acnes J139]
          Length = 361

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMY R+AE+  + 
Sbjct: 83  RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 142

Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P   AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 143 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 202

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS
Sbjct: 203 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 261

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 262 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 312

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL D + A
Sbjct: 313 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342


>gi|269215990|ref|ZP_06159844.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
 gi|269130249|gb|EEZ61327.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
          Length = 356

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/247 (40%), Positives = 138/247 (55%), Gaps = 13/247 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  D  +E+   AGG E+  +A  L +MY R+ E R +K E L+    E  G K     
Sbjct: 106 ADEKDIIVEIRGAAGGDEAAIFAGDLYKMYVRFCESRGWKVENLDASASEAGGFKKIEFK 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG + Y  +K E GVHR+ R+   +S  R  TS +++ V P  D+ I++EI+E D RID
Sbjct: 166 VKGDHVYSLMKFESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDVEINEGDLRID 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK  A  +LRA+LYE  L +
Sbjct: 225 VYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAE 284

Query: 292 R------EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +      E +A IG   + E     +IR+Y   P   V D R     T    +L   L D
Sbjct: 285 QQAAEGAERLAQIGSGDRAE-----KIRTYN-APQDRVTDHRIGYNGTYNGVLLADGLAD 338

Query: 346 FMKATLA 352
            + A  A
Sbjct: 339 LIVALQA 345


>gi|326798862|ref|YP_004316681.1| peptide chain release factor 1 [Sphingobacterium sp. 21]
 gi|326549626|gb|ADZ78011.1| Peptide chain release factor 1 [Sphingobacterium sp. 21]
          Length = 357

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 173/301 (57%), Gaps = 17/301 (5%)

Query: 54  NAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           N IS I+  +D L +  +  L E+A E+ D  ++Q+  +  ++++L +  K  E      
Sbjct: 53  NIISNIETNKDILANEKDQELREMAKEDLDALLVQK-EEKEEKVRLMMIPKDPE------ 105

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+ +A  E+  G GG E+  +A  L RMYTR+ +++ ++ E +++ +G   G K   L 
Sbjct: 106 -DAKNAIFEIRGGTGGDEAALFAGDLYRMYTRYFDQKGWRVEVMDVTEGTAGGYKEVILK 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++ +++EI+ +D  + 
Sbjct: 165 VSGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-VDVEINPADIEMQ 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+ GAGGQ+VN  ++ V++TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK
Sbjct: 224 TSRSGGAGGQNVNKVETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRTKLYELEVQK 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +    +I    KT +  G    +IR+Y   P   V + R  +   +   ++DGD+ + + 
Sbjct: 284 KH--GDIAAKRKTMVSTGDRSAKIRTYNY-PQGRVTEHRIGLTMYNLPAIMDGDIQEIID 340

Query: 349 A 349
           A
Sbjct: 341 A 341


>gi|314981451|gb|EFT25545.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA3]
          Length = 379

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMY R+AE+  + 
Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160

Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P   AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS
Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 330

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL D + A
Sbjct: 331 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 360


>gi|294155813|ref|YP_003560197.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
 gi|291600475|gb|ADE19971.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
          Length = 358

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 147/244 (60%), Gaps = 4/244 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  L RMY +W+++   K + L+ +  E  G    T  I
Sbjct: 109 DDKDVIVEIRGAAGGDEANIFAGDLFRMYQKWSDQNDMKLKVLDENRAEAGGFTLITFSI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ RI   ++  R HTS +++ V P +DD IEIE+   D RID 
Sbjct: 169 LGDKAYSKLKFESGVHRVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEVKSEDIRIDV 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVRITH  +G+VV CQ+ +SQ +NK  A  +L++KLY+LEL+K+
Sbjct: 229 FRSSGNGGQSVNTTDSAVRITHASSGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKK 288

Query: 293 EEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           EE  + G       G+   +IR+Y   P   V D R +   TS S V++G L+  + A L
Sbjct: 289 EEEES-GYRKLAGSGFRSEKIRTYNY-PQDRVTDHRISY-STSLSPVMEGKLNSIIDALL 345

Query: 352 AIKK 355
           A+++
Sbjct: 346 AMEQ 349


>gi|302554164|ref|ZP_07306506.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
 gi|302471782|gb|EFL34875.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
          Length = 358

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ I++
Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDL   ++A +
Sbjct: 337 GDLGAVIQACV 347


>gi|261838950|gb|ACX98715.1| peptide chain release factor RF-1 [Helicobacter pylori 52]
          Length = 352

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LI
Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ ++ SD +I+ 
Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSLNPSDLKIEV 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RA G GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+A+LYE ++++ 
Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
           +++AN  +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ + 
Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341

Query: 349 ATLA 352
             +A
Sbjct: 342 PLIA 345


>gi|27904663|ref|NP_777789.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|29427417|sp|P59456|RF1_BUCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27904060|gb|AAO26894.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 362

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/287 (37%), Positives = 164/287 (57%), Gaps = 13/287 (4%)

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L+LL+  L +     LQ  S  +++I+ E+   Q   L     D  + +LE+ + +GG E
Sbjct: 67  LLLLDSELHDVAEQELQMLSKKMKKIETEI---QVLLLPCDPNDQQNCFLEIRSASGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  ++  L RMY +++E + +KT  + +    + G K   + I G  +YG LK E G HR
Sbjct: 124 AAIFSGDLFRMYIKYSEFQNWKTNIIHMTHSLKGGYKDIIVKITGKGSYGKLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDS 248
           + R+   +S  R HTS   + V PVV    EIE ++ +D +IDT+R+SGAGGQHVNTTDS
Sbjct: 184 VQRVPKTESQGRVHTSTCIVAVIPVVPKK-EIEKVNINDLKIDTFRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIP+G VV+CQ ERSQHKNKA+A ++L +++   EL  + +   I    +  +G 
Sbjct: 243 AVRITHIPSGQVVECQDERSQHKNKAKALSVLVSRIKAAELYNQRKKNAI--QRRDLLGT 300

Query: 309 GRQIRSYVLQPYQM----VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G  +RS   + Y      V D R N+      +VLDG LD  ++  +
Sbjct: 301 G--MRSDRNRTYNFAQNRVTDHRINLVVYCLDEVLDGKLDVLIEPII 345


>gi|39938500|ref|NP_950266.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
 gi|81565140|sp|Q6YRK0|RF1_ONYPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39721609|dbj|BAD04099.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
          Length = 351

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 157/276 (56%), Gaps = 15/276 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LL LA +E D +IL E    L ++K+ +       L     D  +  LE+   +GG E+ 
Sbjct: 70  LLLLAHQEKD-TILSEKKTTLDQLKILL-------LPQDPFDKKNVVLEIKGASGGNEAN 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLR Y ++AE +K+K E L ++   + G+ S  LLI G N Y +LK E GVHR+ 
Sbjct: 122 LFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGVHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS + + V P  ++ +E++I   D R DT+ +SG GGQ VNTT SAVR
Sbjct: 182 RVPATEAQGRIHTSTAVVLVVPEAEE-LELKIDWHDIRTDTFNSSGPGGQSVNTTKSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIP+G+ V CQ+ +SQH+NK +A+ +L+ ++Y   L  ++E  N  +  K  +G G  
Sbjct: 241 LTHIPSGISVACQEGKSQHENKDKAFTILKTRIYNQMLTAKQEEEN--KHRKNLVGTGER 298

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             +IR+Y   P   + D R  +       +++G LD
Sbjct: 299 SEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLD 333


>gi|314966526|gb|EFT10625.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA2]
          Length = 379

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMY R+AE+  + 
Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160

Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P   AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS
Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 330

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL D + A
Sbjct: 331 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 360


>gi|299135937|ref|ZP_07029121.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
 gi|298602061|gb|EFI58215.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
          Length = 356

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 19/351 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   L  +  DP L  +  + + + ++ + L+  +   +E + +L D + 
Sbjct: 1   MFDRLDQIEERYEDLGRQLGDPTLVSDQKKFQTVAKQHRDLEPTVDKFREYR-KLRDGVA 59

Query: 72  LLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGG 127
             +  L E D  +     D L  +  KL    ++ + LL      D  +  +E+ AG GG
Sbjct: 60  EAKAMLTESDAEMRAMAEDELLTLEPKLATTEEELKVLLLPKDPNDDKNVIVELRAGTGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   + RMY R+AE+ K+K E L   D +  G+K  T + +G   Y  +K E GV
Sbjct: 120 DEASLFVAEVFRMYLRFAEQHKWKVEVLSQTDSDVGGLKDVTAIFEGDKVYSQMKYESGV 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P  ++ +++++   D RIDT+ +SG GGQ VNTT 
Sbjct: 180 HRVQRVPATETQGRVHTSAITVAVLPEAEE-VDVKVEAKDLRIDTFCSSGPGGQSVNTTY 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE------LQKREEIANIGES 301
           SA+RITH+PT  VV CQ E+SQ KN+ +A  +LRA+LYE+E      LQ +E    +G  
Sbjct: 239 SAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRARLYEVEAERVHQLQAKERKQQVGTG 298

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            ++E     +IR+Y   P   + D R  +     + V++G L   + A +A
Sbjct: 299 DRSE-----KIRTYNF-PQNRLTDHRIGLTNHQLAMVMEGLLQPTVDALIA 343


>gi|197294284|ref|YP_001798825.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
 gi|226739118|sp|B1V950|RF1_PHYAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171853611|emb|CAM11482.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
          Length = 354

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 139/235 (59%), Gaps = 7/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+    GG E+  +A  LLR Y ++AE +K+K E L +H   + G+ S  LLI
Sbjct: 105 DQKNVILEIKGAVGGNEANLFAADLLRTYMKYAESKKWKVEILNLHPSIKGGLSSVELLI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y +LK E GVHR+ R+   +   R HTS + + V P   + +EI+I  +D R DT
Sbjct: 165 SGQNIYSFLKYESGVHRVQRVPATEVQGRIHTSTAIVLVLPEAKE-VEIKIDWNDIRTDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR++H+P+G+ V CQ+ +SQH+NK +A+ +L+A++Y   L  +
Sbjct: 224 FNSSGPGGQSVNTTKSAVRLSHLPSGISVACQEGKSQHENKEKAFTLLKARIYNQILNAK 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +E  N  +  K+ +G G    +IR+Y   P   + D R  +       +++G LD
Sbjct: 284 QEAEN--KHRKSLVGTGDRSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLD 335


>gi|319428670|gb|ADV56693.1| peptide chain release factor [Phaseolus vulgaris]
          Length = 498

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 187/341 (54%), Gaps = 28/341 (8%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V ++ F   K  DP +  +  E + L +    LD  +S  ++ +D  C+  +    AL +
Sbjct: 130 VSKMKF-QVKLADPDVVSDPKEYQKLAQSVAELDEVVSIYRKFKD--CEKHLEEAKALAK 186

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESL---------LSGEADSNDAYLEVHAGAGGT 128
           D  +      D ++ I  E++   KQ   L          S   D+ +  +EV AG GG 
Sbjct: 187 DGGN----DEDMVEMISFEIDLLSKQLAELEDNLKVLLLPSDPLDARNIMIEVRAGTGGD 242

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  WA  L+RMY R++E+  +K   +     E+ G K+  + IKG   Y  LK E GVH
Sbjct: 243 EAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGFKTYVMEIKGNRVYSKLKYESGVH 302

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ + P VD+ +E+ I   D  + T R+ GAGGQ+VN  ++
Sbjct: 303 RVQRVPLTEAQGRVHTSTATVAIMPEVDE-VEVVIDPKDIELTTARSGGAGGQNVNKVET 361

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+ + H PTG+ + C +ER+Q KNK +A+ +LRAKLYE++L++++E  ++    K+++G 
Sbjct: 362 AIDLVHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEIKLREQQE--SLRNQRKSQVGT 419

Query: 309 G---RQIRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDD 345
           G    +IR+Y  +  ++    L+TN E TS    LDGD++D
Sbjct: 420 GARAEKIRTYNYKDNRVTDHRLKTNYELTS---FLDGDIED 457


>gi|327327350|gb|EGE69126.1| peptide chain release factor 1 [Propionibacterium acnes HL103PA1]
          Length = 400

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMY R+AE+  + 
Sbjct: 122 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 181

Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P   AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 182 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 241

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS
Sbjct: 242 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 300

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y   P
Sbjct: 301 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 351

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              + D R   +      +L GDL D + A
Sbjct: 352 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 381


>gi|212640540|ref|YP_002317060.1| peptide chain release factor 1 [Anoxybacillus flavithermus WK1]
 gi|212562020|gb|ACJ35075.1| Protein chain release factor A [Anoxybacillus flavithermus WK1]
          Length = 361

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 185/347 (53%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   AV+ R   LN    DP +  +  + +   +E+  L   +   +E   ++++L D
Sbjct: 4   MFDRLEAVEARYEKLNELLMDPEVLNDPKKLRDYSKEQSDLAETVQTYREYKSVREQLAD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  + ++  K    LL  +  D  +  +E+   AGG
Sbjct: 64  AKAMLEEKLDPDMRDMVKEEISELEEREEQLVEKLKVLLLPKDPNDDKNVIMEIRGAAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E H     G K    +I+G  AY  LK E G 
Sbjct: 124 EEAALFAGDLYRMYTRYAESQGWKTEVIEAHPTGLGGYKEIIFMIQGKGAYSKLKFENGA 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P +++       + D R+DT+ +SG GGQ VNTT 
Sbjct: 184 HRVQRVPETESGGRIHTSTATVACLPEMEEIEIEINEK-DIRVDTFASSGPGGQSVNTTM 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 243 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 300

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VL+G LD+ + A +
Sbjct: 301 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLEGKLDEIIDALI 346


>gi|294631400|ref|ZP_06709960.1| peptide chain release factor 1 [Streptomyces sp. e14]
 gi|292834733|gb|EFF93082.1| peptide chain release factor 1 [Streptomyces sp. e14]
          Length = 355

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 144/248 (58%), Gaps = 10/248 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158

Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +++EI+
Sbjct: 159 VKARGQIEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDVEIN 217

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L
Sbjct: 218 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRL 277

Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
                ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLDGDL
Sbjct: 278 LAAAQEEAEREAADARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDL 336

Query: 344 DDFMKATL 351
              ++A +
Sbjct: 337 AAVIQACV 344


>gi|295697770|ref|YP_003591008.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
 gi|295413372|gb|ADG07864.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
          Length = 355

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L RMYTR+AE++ ++ E ++ H  +  G K     +
Sbjct: 106 DDKNVIVEIRGAAGGEEASLFAADLFRMYTRYAERQGWRVEMIDSHPTDLGGFKEVVFSV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E G HR+ R+   +S  R HTS ++        + +E+EI E D RIDT
Sbjct: 166 QGRGAYSRLKFESGAHRVQRVPTTESGGRIHTS-TATVAVMPEVEEVEVEIHEKDLRIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ++G GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KN+ +A  +LRA+LY  E  +R
Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLY--EKYRR 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   + ++ K+ +G G    +IR+Y   P   V D R  +       VLDGDLD+ + A
Sbjct: 283 EQQEELAQTRKSLVGTGDRSERIRTYNF-PQNRVTDHRIGLTLHRLDAVLDGDLDEIIHA 341

Query: 350 TLA 352
            +A
Sbjct: 342 LIA 344


>gi|328944392|ref|ZP_08241854.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
 gi|327490976|gb|EGF22753.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
          Length = 354

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 9/240 (3%)

Query: 107 LLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           L+ G+  D  D  +E+ AG GG E+  +A  L +MY R+AE + +K E L     E  G 
Sbjct: 98  LIPGDPNDEKDTIVEIRAGVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGF 157

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+    + G   Y  +K E GVHR+ R+   +S  R  TS +++ V P  D+ I+I+I  
Sbjct: 158 KTIEFKMLGEKVYSVMKYESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDIQIDP 216

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTY ASG GGQ VNTT SAVRITH+PT  VVQ Q +RSQ +N+     MLRA+LY
Sbjct: 217 TDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLY 276

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           E+EL+K++E    G +  ++IG G    +IR+Y  QP   V D R     T  + VL GD
Sbjct: 277 EMELEKQQE--EQGAARLSQIGHGNRSEKIRTYN-QPQDRVTDHRIGFNATY-NGVLLGD 332


>gi|169826579|ref|YP_001696737.1| peptide chain release factor 1 [Lysinibacillus sphaericus C3-41]
 gi|238688208|sp|B1I069|RF1_LYSSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168991067|gb|ACA38607.1| Peptide chain release factor 1 (RF-1) [Lysinibacillus sphaericus
           C3-41]
          Length = 358

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 188/343 (54%), Gaps = 12/343 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E   ++++L D
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKNVKEQLVD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127
              +L+   + D   +++E  + L+  + E+E +    L+  + + N +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V++ +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVEE-VDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ ++ +Q+ ++   I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQK--EIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            G    +IR+Y   P   V D R  +       +++G LD+ +
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEII 339


>gi|126653461|ref|ZP_01725557.1| peptide chain release factor 1 [Bacillus sp. B14905]
 gi|126589817|gb|EAZ83950.1| peptide chain release factor 1 [Bacillus sp. B14905]
          Length = 358

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 188/343 (54%), Gaps = 12/343 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E   ++++L D
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDSYREYKNVKEQLVD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127
              +L+   + D   +++E  + L+  + E+E +    L+  + + N +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V++ +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVEE-VDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ ++ +Q+ ++   I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQK--EIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            G    +IR+Y   P   V D R  +       +++G LD+ +
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEII 339


>gi|85057288|ref|YP_456204.1| peptide chain release factor 1 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789393|gb|ABC65125.1| bacterial peptide chain release factor 1 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 351

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 159/281 (56%), Gaps = 25/281 (8%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LL LA +E D +IL +    L+++K+ +       L     D  +  LE+   AGG E+ 
Sbjct: 70  LLLLARQEKD-TILSKKKITLEKLKILL-------LPQDPFDKKNVVLEIKGAAGGNEAN 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLR Y ++AE +K+K E L ++   + G+ S  LLI G N Y +LK E GVHR+ 
Sbjct: 122 LFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGVHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS + + V+P  ++ +E++I   D R DT+ +SG GGQ VNTT SAVR
Sbjct: 182 RVPTTEAQGRIHTSTAVVLVFPEAEE-LELKIDWHDIRTDTFNSSGPGGQSVNTTKSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--------ELELQKREEIANIGESSK 303
           +TH+P+G+ V CQ+ +SQH+NK +A+ +L+ ++Y        E E   R+++   GE S+
Sbjct: 241 LTHVPSGISVACQEGKSQHENKDKAFTLLKTRIYNQMLNIKQEEEKTHRKKLVGTGERSE 300

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                  +IR+Y   P   + D R  +       +++G LD
Sbjct: 301 -------KIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLD 333


>gi|308233416|ref|ZP_07664153.1| peptide chain release factor 1 [Atopobium vaginae DSM 15829]
          Length = 300

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 9/240 (3%)

Query: 107 LLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           L+ G+  D  D  +E+ AG GG E+  +A  L +MY R+AE + +K E L     E  G 
Sbjct: 44  LIPGDPNDEKDTIVEIRAGVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGF 103

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+    + G   Y  +K E GVHR+ R+   +S  R  TS +++ V P  D+ I+I+I  
Sbjct: 104 KTIEFKMLGEKVYSVMKYESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDIQIDP 162

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTY ASG GGQ VNTT SAVRITH+PT  VVQ Q +RSQ +N+     MLRA+LY
Sbjct: 163 TDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLY 222

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           E+EL+K++E    G +  ++IG G    +IR+Y  QP   V D R     T  + VL GD
Sbjct: 223 EMELEKQQE--EQGAARLSQIGHGNRSEKIRTYN-QPQDRVTDHRIGFNATY-NGVLLGD 278


>gi|300867105|ref|ZP_07111771.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
 gi|300334860|emb|CBN56937.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
          Length = 365

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 187/332 (56%), Gaps = 21/332 (6%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           +DP+ +Q V +A+  + E   + N     KE Q+ L     +L+ +  + +   +QE + 
Sbjct: 31  KDPNEFQRVAKARSSLEE---VVNTFELWKETQENLAGAKQILKESASDPE---MQEMA- 83

Query: 91  NLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           +L+  +LE +    ES L          D  +  LE+ AG GG E+  WA  L+RMY+R+
Sbjct: 84  SLEVGELEDKSDYLESRLKVLLLPRDPNDDKNIMLEIRAGTGGDEASIWAADLVRMYSRY 143

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+ + ++ + L    GE  G K A L I+G + Y  LK E GVHR+ R+   ++  R HT
Sbjct: 144 AQSQNWQVKMLSESVGESRGFKEAILEIQGDSVYSKLKFEAGVHRVQRVPVTEAGGRVHT 203

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P VDD +EI I   D  + T R+ GAGGQ+VN  ++A  + H PTG+ + C 
Sbjct: 204 STATVAVMPEVDD-VEIHIDPKDIEMSTARSGGAGGQNVNKVETAADLFHKPTGIRIFCT 262

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
           +ERSQ +NK +A  +LRAKLYE++L  RE+   +    ++++G G    +IR+Y  +  +
Sbjct: 263 EERSQLQNKERAMQILRAKLYEMKL--REQQDEVTSMRRSQVGTGSRSEKIRTYNYKDNR 320

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              D R   E  S + +L+GD+DD ++A +++
Sbjct: 321 AT-DHRLG-ENFSLNTILEGDIDDVIQACISL 350


>gi|57234023|ref|YP_181923.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
 gi|119361531|sp|Q3Z776|RF1_DEHE1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57224471|gb|AAW39528.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
          Length = 355

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 187/345 (54%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
            +N  +R   +  +   P +  +    + L +ER  L   +      K I   L D   L
Sbjct: 5   LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELEDTKNL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTES 130
           LE+  +ED   +++    +L++   ++ Y Q   E L     D     +E+ AG GG E+
Sbjct: 65  LEIEKDEDMKDMVRGEIASLEKSMADL-YTQMTLELLPKDPNDDKSIIMEIRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MYTR+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+
Sbjct: 124 GLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P V++ ++I+I+  D R+D + +SGAGGQ+V    +A+
Sbjct: 184 QRVPQTEASGRIHTSTATVAVLPQVEE-VDIDINMDDVRVDIFHSSGAGGQNVQKVATAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E     ES + ++G   
Sbjct: 243 RLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDE--ERTESRRAQVGQAD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R  +   +   +L+G LD+ +  TLA
Sbjct: 301 RSEKIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIID-TLA 343


>gi|22297692|ref|NP_680939.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
 gi|32171539|sp|Q8DMG9|RF1_THEEB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22293869|dbj|BAC07701.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
          Length = 364

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 186/340 (54%), Gaps = 13/340 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELAL 77
           Q  + L  +  DP +  N  E + + R R  L+  ++   E   +  +L D   L + A 
Sbjct: 15  QTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLNQQLVDARQLHKEAA 74

Query: 78  EEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            E +   +  +E +    RI    E  +   L     D  +  LE+ AGAGG E+  WA 
Sbjct: 75  NEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEIRAGAGGDEAGIWAG 134

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L+RMY+R+A+ + ++   +     E  G K A L IKG   Y  LK E GVHR+ R+  
Sbjct: 135 DLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKLKYESGVHRVQRVPA 194

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +++ R HTS +++ V P VD+ +E+EI   D  + T R+ GAGGQ+VN  ++AV + H 
Sbjct: 195 TEASGRIHTSTATVAVMPEVDE-VEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLYHK 253

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L++++E   I    ++++G G    +I
Sbjct: 254 PTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQEA--ITSMRRSQVGTGDRSEKI 311

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y  +    V D R   +  S S VL+GDL+  ++A ++
Sbjct: 312 RTYNYKD-DRVTDHRLG-QNFSLSSVLEGDLEPIIQACIS 349


>gi|323698089|ref|ZP_08110001.1| peptide chain release factor 1 [Desulfovibrio sp. ND132]
 gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
          Length = 355

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 143/245 (58%), Gaps = 11/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +A  L RMYTR+AE   +K E +  +     G K     I
Sbjct: 105 DEKNIILEIRAGTGGDEAALFAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ + P  ++ ++I++   D R+D 
Sbjct: 165 SGDKVYSKLKYESGTHRVQRVPATESQGRIHTSAVTVAIMPEAEE-VDIDLRPEDLRVDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-- 290
           +R+SG GGQ VNTTDSA+R+THIP+G++V CQ E+SQHKNKA+A  +LR++L ++E    
Sbjct: 224 FRSSGPGGQSVNTTDSAIRVTHIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKA 283

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           K E+ AN     ++++G G    +IR+Y   P   V D R N+       +++G+L D  
Sbjct: 284 KAEQEAN----RRSQVGSGDRSERIRTYNY-PQGRVSDHRINLTLHQLPQIMEGELQDLT 338

Query: 348 KATLA 352
            A ++
Sbjct: 339 DALIS 343


>gi|149280703|ref|ZP_01886814.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
 gi|149228568|gb|EDM33976.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
          Length = 380

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 144/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A  E+  G GG E+  +A  L RMY+R+ E++ +K E +++ +G   G K   L +
Sbjct: 129 DAKNAVFEIRGGTGGDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKV 188

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++ I++ I+ +D  + T
Sbjct: 189 SGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-IDLYINPADIDLQT 247

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++ V++TH P+G+VV CQQERSQ  N+  A  MLR+KLY++ELQK+
Sbjct: 248 SRSGGAGGQNVNKVETKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKK 307

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +I    KT +  G    +IR+Y   P   V D R  +   + S V+DG + + + A
Sbjct: 308 N--GDIAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRIGLTLYNLSGVMDGGVQELIDA 364


>gi|307327906|ref|ZP_07607088.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
 gi|306886424|gb|EFN17428.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
          Length = 359

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 15/337 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  +  EA+ L +    L   I+  +  +    D     ELA  +DD   +
Sbjct: 15  LEKRLADPAVHADQREARRLNKRYAELTPVIAAYRAWKQAGEDIETARELA--QDDPDFV 72

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  +  Q  +   +  +   +    +D  D  LEV AG GG ES  +A  LLRMY R+A
Sbjct: 73  EEAKELEQSREGLTDRLRLLLVPRDPSDDKDIILEVKAGEGGEESALFAGDLLRMYLRYA 132

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQGVHRLVRISP 195
           E+  +KTE L+ ++ +  G K   + +K          G   +  LK E GVHR+ R+  
Sbjct: 133 ERVGWKTEILDANESDLGGYKDVQVAVKTKGGNGATEPGQGVWARLKYEGGVHRVQRVPA 192

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS + + V P  ++ +E+EI  +D RID YR+SG GGQ VNTTDSAVRITH+
Sbjct: 193 TESQGRIHTSAAGVLVTPEAEE-VEVEIGPNDLRIDVYRSSGPGGQSVNTTDSAVRITHL 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314
           PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+   +    +IR+
Sbjct: 252 PTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQVRTVDRSERIRT 311

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   + D R   +  +   VLDG+L+  ++A +
Sbjct: 312 YNY-PENRISDHRVGFKAYNLDQVLDGELEPVIQACV 347


>gi|295707229|ref|YP_003600304.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
 gi|294804888|gb|ADF41954.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
          Length = 325

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 164/294 (55%), Gaps = 8/294 (2%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAY 118
           K+++++L +   +LE  L+ D   +++E    L+  + E VE  +   +     D  +  
Sbjct: 22  KDVKEQLSEAKTMLEDKLDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVI 81

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +EV   AGG E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY
Sbjct: 82  MEVRGAAGGDEAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAY 141

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             +K E G HR+ R+   +S  R HTS +++   P  ++ +E++I E D R+DT+ +SG 
Sbjct: 142 SKMKFENGAHRVQRVPETESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGP 200

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTT SAVR+TH+PT  VV CQ E+SQ KNK +A  +LRA++Y+ + Q RE  A  
Sbjct: 201 GGQSVNTTMSAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-REAQAEY 258

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             + K  +G G    +IR+Y   P   V D R  +       +L+G LD+ + A
Sbjct: 259 DATRKQAVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEIIDA 311


>gi|299469865|emb|CBN76719.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 364

 Score =  169 bits (428), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 152/244 (62%), Gaps = 12/244 (4%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E DS +A LEV +G+GG E+  +A  L  MY R+AE + +K E +     +  G + A+ 
Sbjct: 108 EGDSKNALLEVRSGSGGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASA 167

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I+G + YG LK E GVHR+ R+ P +S  R HTS +S+ V    ++ +++++ +SD R 
Sbjct: 168 SIRGEDVYGSLKFENGVHRVQRV-PSNS-PRLHTSAASVVVMMEAEE-MDLKLEQSDLRF 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           + +RASGAGGQHVNTT+SAVRITH+PTG+    Q ERSQH NK +A  +LR++++E+   
Sbjct: 225 EAFRASGAGGQHVNTTESAVRITHVPTGITASIQDERSQHSNKEKALKVLRSRVFEV--- 281

Query: 291 KREEIANIGESSK-TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345
           +R+EIA    + + + +G G    +IR+Y   P   + D R N  +     ++ G+ L D
Sbjct: 282 RRDEIARKEAAVRASAVGSGDRSERIRTYNF-PQDRITDHRANYSRHGWEAMMRGEMLGD 340

Query: 346 FMKA 349
           F++A
Sbjct: 341 FLEA 344


>gi|302542528|ref|ZP_07294870.1| peptide chain release factor 1 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460146|gb|EFL23239.1| peptide chain release factor 1 [Streptomyces himastatinicus ATCC
           53653]
          Length = 356

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/337 (35%), Positives = 179/337 (53%), Gaps = 14/337 (4%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
           + L  +  DP +  +  EAK L +    L   I   ++ +    D     ELA  +DD  
Sbjct: 13  AALEKRLADPAVHADQREAKRLNKRYAELTPIIDTYRDWKQTGDDIETAQELA--QDDPD 70

Query: 84  ILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
              E  +  L+R +L  +  +   +    +D  D  LEV AG GG ES  +A  LLRMY 
Sbjct: 71  FADEVKELELRRAEL-TDRLRLLLVPRDPSDDKDVILEVKAGEGGEESALFAGDLLRMYL 129

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISP 195
           R+AE+  +KTE ++ ++ +  G K   + +K       G   +  LK E GVHR+ R+  
Sbjct: 130 RYAERIGWKTEIIDANESDLGGYKDVQVAVKAKGTIEPGQGVWARLKYEGGVHRVQRVPA 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS + + V P  ++ +E+EI  +D RID YR+SG GGQ VNTTDSAVRITH+
Sbjct: 190 TESQGRIHTSAAGVLVTPEAEE-VEVEIGPNDLRIDVYRSSGPGGQSVNTTDSAVRITHL 248

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314
           PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+   +    +IR+
Sbjct: 249 PTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQVRTVDRSERIRT 308

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   + D R   +  +   VLDG+L   ++A +
Sbjct: 309 YNF-PENRISDHRVGFKAYNLDQVLDGELAPVIQACV 344


>gi|281358665|ref|ZP_06245143.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
 gi|281314895|gb|EFA98930.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
          Length = 362

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 183/348 (52%), Gaps = 29/348 (8%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD------RLCDNLILL-- 73
           R + L     DP ++    E + + +E + L+   +  ++  D       L DN  +L  
Sbjct: 16  RFAELEAALADPAIYARGAECRRVSQEHRKLE---TLFRKFDDWRKALAELADNREMLTA 72

Query: 74  --ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGT 128
             +  L E   + + +  +  Q+++ +++     SLL    D NDA    + +   AGG 
Sbjct: 73  ETDAELRELIAADIADLEERAQKLEADIQI----SLLP--PDPNDAKNIIVGIKPAAGGD 126

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L R Y ++AEK+ ++ E L+  D E  GIK  +  + G   Y  +K E GVH
Sbjct: 127 EAALFAGELFRAYMKFAEKKGWRIEVLDQTDTELGGIKDVSFSLSGDEVYSLMKYESGVH 186

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P  ++ +E++I   D R D +R+SG GGQ VNTTDS
Sbjct: 187 RVQRVPATEAGGRIHTSTVTVAVMPEAEE-VELDIRPEDLRFDVFRSSGPGGQCVNTTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+ V  QQE+SQH+NK  A  +L A+L  LE +++EE        ++++G 
Sbjct: 246 AVRVTHIPTGIAVASQQEKSQHRNKEIALRILYARL--LEHKQQEEADKQAADKRSQVGT 303

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G    +IR+Y   P   V D R N+       +++G+LD  +   L I
Sbjct: 304 GDRSERIRTYNF-PQNRVTDHRFNVNTFDLPKLMEGELDLILDQILMI 350


>gi|119961991|ref|YP_948327.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
 gi|119948850|gb|ABM07761.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
          Length = 359

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 145/248 (58%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  LEV  G GG E+  +A  LLRMY R+AE R +KTE +   + +  G K   + I
Sbjct: 102 DARNVILEVKGGEGGDEAALFAGDLLRMYMRYAESRGWKTEMISATESDLGGYKDVAVAI 161

Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG         +  LK E GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++
Sbjct: 162 KGNSNDPAQGVFARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 221

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA+L  
Sbjct: 222 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARL-- 279

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  Q+ +  A   E  K++I       +IR+Y   P   + D RT  +  +   V++GDL
Sbjct: 280 LAHQQEQIDAANSEQRKSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGDL 338

Query: 344 DDFMKATL 351
           +  +++ +
Sbjct: 339 EPVIQSAI 346


>gi|159474546|ref|XP_001695386.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
 gi|158275869|gb|EDP01644.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
          Length = 336

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/263 (41%), Positives = 153/263 (58%), Gaps = 19/263 (7%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE +D  +R+ L +   +  +       S  A LEV AGAGG E+  +A+ LL MY R A
Sbjct: 61  QEAADLTRRLLLALVPPEPSA-------SRPALLEVRAGAGGAEAALFASELLAMYRRLA 113

Query: 146 EKRKFKT-----EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           + R   +     E LE+ + E  G++ AT+   G   YG L GE GVHR+ R+   ++  
Sbjct: 114 QARTCASRGWTWEVLELGNSEHGGVRHATVAGAGEGVYGVLSGESGVHRVQRVPVTEAGG 173

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P  D+ +++ + E D R++T RASGAGGQHVN TDSAVRITH+PTG+V
Sbjct: 174 RLHTSTAAVVVLPQADE-VDVRLREEDLRVETMRASGAGGQHVNVTDSAVRITHLPTGLV 232

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V CQ ERSQH N+A A  +LR++LY+LE Q+R   A  GE     +  G    ++R+Y  
Sbjct: 233 VSCQNERSQHLNRAAALKVLRSRLYDLEAQRRARQA--GEQRSALVASGDRSERVRTYNF 290

Query: 318 QPYQMVKDLRTNIEKTSPSDVLD 340
            P   V D R ++       VL+
Sbjct: 291 -PQGRVTDHRIHLTVHDLGSVLE 312


>gi|157133587|ref|XP_001656262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870765|gb|EAT34990.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/259 (40%), Positives = 159/259 (61%), Gaps = 13/259 (5%)

Query: 66  LCDNL-ILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLE 120
           + DNL  L E++ E+D+    +++E  +    I  +++ +    +LS   E D N   LE
Sbjct: 111 IMDNLNSLQEMSTEKDEDMLQLMREEKEAYTNILRKLDGEIMNGILSMDDEEDYNTLILE 170

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V AG GG E+  ++  L  MY  + + + ++TE +E  D E  GI+ A++++ G +AY +
Sbjct: 171 VAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETEDTELGGIRHASIVVHGRDAYRY 230

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   + ++R HTS +++ V P  D+  EIE+ + D +I+T RASGAGG
Sbjct: 231 LKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDE-FEIELKDKDLKIETKRASGAGG 289

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A   L AKL + EL+ +    N  +
Sbjct: 290 QHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQKLLAKLTQQELESK---FNATQ 346

Query: 301 S-SKTEIGWG---RQIRSY 315
           S  K+++G      +IR+Y
Sbjct: 347 SMKKSQVGSSLRNEKIRTY 365


>gi|118581059|ref|YP_902309.1| peptide chain release factor 1 [Pelobacter propionicus DSM 2379]
 gi|166223584|sp|A1ASD1|RF1_PELPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118503769|gb|ABL00252.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           propionicus DSM 2379]
          Length = 354

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 143/243 (58%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AG GG ES  +A  L RMY+R+A+  ++K E +   + E  G K     +
Sbjct: 103 DDKSVILEIRAGTGGDESALFAGDLFRMYSRFADVNRWKVETISASESERGGFKEIIASV 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   +  LK E G HR+ R+   ++  R HTS  ++ +    +D ++I+I+ +D +ID 
Sbjct: 163 EGEGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAIMAEAED-VDIDINPTDLKIDV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ERSQ KN+A+A  +L+ ++  ++  ++
Sbjct: 222 YRSSGAGGQHVNTTDSAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRI--MDSIQQ 279

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+ A +    K ++G G    +IR+Y   P   + D R  +       ++ GD+ + + A
Sbjct: 280 EQNARMAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIVDA 338

Query: 350 TLA 352
             A
Sbjct: 339 LRA 341


>gi|328870409|gb|EGG18783.1| peptide chain release factor 1 [Dictyostelium fasciculatum]
          Length = 530

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/252 (40%), Positives = 151/252 (59%), Gaps = 17/252 (6%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S + D  +A +E+ AG GG+E+Q +A  +L MY  +A+   +K E LEI   +  G K
Sbjct: 268 LPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEVLEIGWTDAVGNK 327

Query: 167 S---ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           +   A+  I G   +G+LK E GVHR+ RI   ++  R HTS  ++ + P   + ++I+I
Sbjct: 328 ACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAILPEPKE-VDIKI 386

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            +S+ RID YR+SG GGQ VNTTDSAVRITH+PTG VV  Q ERSQ  N+A+A  +LRA+
Sbjct: 387 RDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLMNRAKAMKILRAR 446

Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           LYE E  +          + IG++S++E     +IR+Y   P   V D R NI   +   
Sbjct: 447 LYEAERSRLHNERSSHRSSQIGDASRSE-----KIRTYNF-PQDRVTDHRVNISTNNIES 500

Query: 338 VLDGD-LDDFMK 348
           V+ G+ L+D ++
Sbjct: 501 VMAGESLNDLIE 512


>gi|302558381|ref|ZP_07310723.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
 gi|302475999|gb|EFL39092.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
          Length = 358

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILR 277

Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L     ++ E  A     S+   +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           GDL   ++A +
Sbjct: 337 GDLAAVIQACV 347


>gi|320102129|ref|YP_004177720.1| peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC
           43644]
 gi|319749411|gb|ADV61171.1| bacterial peptide chain release factor 1 (bRF-1) [Isosphaera
           pallida ATCC 43644]
          Length = 364

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 182/334 (54%), Gaps = 16/334 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK--EIQDRLCDNLILLELAL 77
           +R   LN +   P L  +      LMRER  L   A+ + +  E+  R  +   ++E   
Sbjct: 10  RRYEELNRELASPDLVNDPGRLAALMRERSALAKLAVPYARYLELTRRRAEVQQVIETES 69

Query: 78  EEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133
           + +     Q   D L + + E  EY   ++L+  +A  +D     +E+ AG GG E+  +
Sbjct: 70  DPEMKEYAQAEFDQLAQAEAESAEY--LKTLIYEQATGSDHAGVIVEIRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L  MY R+ E++ ++ E LEI   E  G + A+  ++G  AY  L+ E G HR+ R+
Sbjct: 128 ARDLYEMYRRFVERQGWRFEPLEIAPTELGGFREASFGVRGEGAYRHLQFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P  ++ +EIE+ + D +ID  RA G GGQH N T+S VRIT
Sbjct: 188 PVTETQGRIHTSAATVAVLPEPEE-VEIELRDEDLQIDVMRAGGPGGQHQNKTESGVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV C+ ERSQHKNKA+A  +LR++LY  E Q+    +   ++ ++ IG G   +
Sbjct: 247 HLPSGIVVNCRDERSQHKNKAKALRILRSRLY--EAQRNAAQSQRSQTRRSLIGSGDRSQ 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +IR+Y   P   V D R N+       ++ G+L+
Sbjct: 305 RIRTYNF-PQNRVTDHRINLTLHQLDRIVAGELE 337


>gi|120434841|ref|YP_860527.1| peptide chain release factor 1 [Gramella forsetii KT0803]
 gi|166223562|sp|A0LYL5|RF1_GRAFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117576991|emb|CAL65460.1| peptide chain release factor 1 [Gramella forsetii KT0803]
          Length = 358

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 138/232 (59%), Gaps = 3/232 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L RMYT++ E R +    ++  +G   G K     +
Sbjct: 106 DGKNIVMEIRAGTGGDEASIFAGDLYRMYTKYVEGRGWSHNIVDFSEGTSGGFKEMIFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG +K E GVHR+ R+   ++  R HTS +++ V P  ++  ++EI   + RID 
Sbjct: 166 SGDDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVEIDPKEVRIDY 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K+
Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKK 284

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            E      +S    G    +IR+Y     + V D R N+     S++++GD+
Sbjct: 285 MEADAAKRNSMVSSGDRSAKIRTYNYAQSR-VTDHRINLTLYDLSNIINGDI 335


>gi|157134367|ref|XP_001663262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870516|gb|EAT34741.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/260 (41%), Positives = 154/260 (59%), Gaps = 15/260 (5%)

Query: 66  LCDNLILLELALEEDDCSILQ------ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + DNL  L+    E D  +LQ      E   N+ R KL+ E       +  E D N   L
Sbjct: 111 IMDNLNSLQEMSAEKDEDMLQLMREEKEAYTNILR-KLDGEIMNGILSMDDEEDYNTLIL 169

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           EV AG GG E+  ++  L  MY  + + + ++TE +E  D E  GI+ A++++ G +AY 
Sbjct: 170 EVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETEDTELGGIRHASIVVHGRDAYR 229

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E GVHR+ R+   + ++R HTS +++ V P  D+  EIE+ + D +I+T RASGAG
Sbjct: 230 YLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDE-FEIELKDKDLKIETKRASGAG 288

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A   L AKL + EL+ +    N  
Sbjct: 289 GQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQKLLAKLTQQELESK---FNAT 345

Query: 300 ES-SKTEIGWG---RQIRSY 315
           +S  K+++G      +IR+Y
Sbjct: 346 QSMKKSQVGSSLRNEKIRTY 365


>gi|158300562|ref|XP_320450.4| AGAP012078-PA [Anopheles gambiae str. PEST]
 gi|157013219|gb|EAA00316.4| AGAP012078-PA [Anopheles gambiae str. PEST]
          Length = 760

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/252 (39%), Positives = 148/252 (58%), Gaps = 16/252 (6%)

Query: 74  ELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTE 129
           EL  ++DD    +L+E  +    I   ++ +    +LS   E D     +EV AG GG E
Sbjct: 459 ELKDDKDDEMVQLLKEEREAYGSILFRLDSEILNGILSMDDEEDYGSLIMEVTAGVGGQE 518

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L  MY  + E + ++ E L+  + +  G + AT +I GP+AY +LK E GVHR
Sbjct: 519 AMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRHATTVISGPDAYRYLKHEGGVHR 578

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   + + R HTS  ++ + P  DD  ++E+ E D +I+T RASGAGGQHVNTTDSA
Sbjct: 579 VQRIPATEKSGRIHTSTVTVSIIPRPDD-FQVELKEKDLKIETKRASGAGGQHVNTTDSA 637

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSK 303
           VRI H+PTG+ V+CQ ERSQ KN+  A   L AKL ++EL+ R       + + +G+S +
Sbjct: 638 VRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQIELEARFSSTQALKKSQVGQSLR 697

Query: 304 TEIGWGRQIRSY 315
            E     +IR+Y
Sbjct: 698 NE-----KIRTY 704


>gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R]
 gi|24418635|sp|Q8NR57|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223553|sp|A4QDG1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC
           13032]
 gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum
           ATCC 13032]
 gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 358

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 148/249 (59%), Gaps = 7/249 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+ AGAGG E+  +A  LLRMY ++A+K  F  E L+  + +  G+K  TL I
Sbjct: 103 DGEDIVMEIKAGAGGEEAALFAGDLLRMYQKFADKHGFVVEVLDSAESDLGGVKDITLSI 162

Query: 173 KG--PN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           +   P+   A+   K E GVHR+ R+   +S  R  TS + + VYP  D+   +EI E D
Sbjct: 163 RSRQPSRDGAWSQFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVENVEIDEKD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +N+A+A  +L A+L  +
Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLAARLQAM 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           + ++    A  G +++   +    +IR+Y   P   + D R   +  +   VLDG+LDD 
Sbjct: 283 KEEEAAAEAATGRAAQIRTMDRSERIRTYNW-PENRISDHRIGFKANNLDSVLDGELDDL 341

Query: 347 MKATLAIKK 355
             A  A ++
Sbjct: 342 FTALQAAER 350


>gi|167842463|gb|ACA03159.1| RF1 [Dictyostelium fasciculatum]
          Length = 515

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/255 (40%), Positives = 152/255 (59%), Gaps = 17/255 (6%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S + D  +A +E+ AG GG+E+Q +A  +L MY  +A+   +K E LEI   +  G K
Sbjct: 253 LPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEVLEIGWTDAVGNK 312

Query: 167 S---ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           +   A+  I G   +G+LK E GVHR+ RI   ++  R HTS  ++ + P   + ++I+I
Sbjct: 313 ACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAILPEPKE-VDIKI 371

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            +S+ RID YR+SG GGQ VNTTDSAVRITH+PTG VV  Q ERSQ  N+A+A  +LRA+
Sbjct: 372 RDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLMNRAKAMKILRAR 431

Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           LYE E  +          + IG++S++E     +IR+Y   P   V D R NI   +   
Sbjct: 432 LYEAERSRLHNERSSHRSSQIGDASRSE-----KIRTYNF-PQDRVTDHRVNISTNNIES 485

Query: 338 VLDGD-LDDFMKATL 351
           V+ G+ L+D ++  +
Sbjct: 486 VMAGESLNDLIEEII 500


>gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4]
 gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4]
          Length = 356

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 184/337 (54%), Gaps = 12/337 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  +   A+ L R    L   +  ++E+ D+  D+L   +  L  +D +  
Sbjct: 16  LEQELADPAVHADQARARKLGRRYAELSPVVRAVREL-DQARDDLSAAK-ELSAEDATFA 73

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E  +   +I  ++E K  E LL  +  D +D  +E+ +G GG ES  +A  LLRMY R+
Sbjct: 74  AEADELTAKIP-QLEAKLTELLLPRDPYDGSDVVMEIKSGEGGEESALFAGDLLRMYLRY 132

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLVRISPYDSN 199
           AE+  +K E L+  + +  G K  TL +K   A     +  LK E GVHR+ R+   +S 
Sbjct: 133 AERHNWKAEVLDSTESDLGGYKDVTLSLKSKTADVEGVWARLKFEGGVHRVQRVPATESQ 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS S + +Y    + +E+EI  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+
Sbjct: 193 GRIHTSASGVLIY-PEPEEVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGI 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318
           VV CQ E+SQ +N+A+A  +L+A+L  +  ++    A+    S+   +    ++R+Y   
Sbjct: 252 VVSCQNEKSQIQNRARALQVLQARLQAIAEEEAAAKASDARRSQVRTVDRSERVRTYNF- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   + D R N +  +   VLDG+LD  + A  A  +
Sbjct: 311 PENRISDHRVNYKAYNLDQVLDGELDGVLDALAAADR 347


>gi|239944287|ref|ZP_04696224.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|239990742|ref|ZP_04711406.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           11379]
 gi|291447755|ref|ZP_06587145.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|291350702|gb|EFE77606.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
          Length = 358

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI  +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L    +    +E +++  S    +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           G+LD  ++A +
Sbjct: 337 GELDAVIQACV 347


>gi|56421913|ref|YP_149231.1| peptide chain release factor 1 [Geobacillus kaustophilus HTA426]
 gi|261420783|ref|YP_003254465.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297531578|ref|YP_003672853.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|319768453|ref|YP_004133954.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
 gi|61214572|sp|Q5KUH3|RF1_GEOKA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56381755|dbj|BAD77663.1| peptide chain release factor 1 (RF-1) in translation [Geobacillus
           kaustophilus HTA426]
 gi|261377240|gb|ACX79983.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297254830|gb|ADI28276.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|317113319|gb|ADU95811.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
          Length = 358

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 191/347 (55%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD   AV QR   LN    DP +  +  + +   +E+  L+  +   +E   ++++L +
Sbjct: 1   MFDRLEAVEQRYEKLNELLMDPDVINDPKKLRDYSKEQADLEETVQTYREYKSVREQLAE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              +LE  LE +   +++E    L+  +  +  K    LL  +  D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLEPELREMVKEEIGELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMINGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P +++ IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGHLDEIIEALI 343


>gi|254778803|ref|YP_003056908.1| peptide chain release factor 1 [Helicobacter pylori B38]
 gi|254000714|emb|CAX28630.1| Peptide chain release factor 1 (RF-1) [Helicobacter pylori B38]
          Length = 352

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/299 (37%), Positives = 171/299 (57%), Gaps = 19/299 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+  LE   KQ   L+  +  D  + 
Sbjct: 61  IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y   K E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 171 YSRFKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PT + V  Q E+SQHKNK +A  +L+ +LYE ++++ +++AN
Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEE-QQLAN 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352
             +  K ++G G    +IR+Y   P   + + R N+   S  ++ L G+LD+ +   +A
Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|330719389|ref|ZP_08313989.1| peptide chain release factor 1 [Leuconostoc fallax KCTC 3537]
          Length = 359

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 161/301 (53%), Gaps = 17/301 (5%)

Query: 57  SFIKEIQDR--LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
           S +++IQD   L D+  + ELA   DD   L+      Q+  LE + K    L     D 
Sbjct: 56  SVLQDIQDAEDLLDDTDMAELA--RDDLKTLKP-----QKASLEEQLKVL-MLPQDPNDD 107

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            +  +E+   AGG ES  +A  LL MY ++AEK+ +    ++    E  G K   ++I G
Sbjct: 108 KNIIMEIRGAAGGDESSLFAADLLDMYRKYAEKQNWHINLIDESATEVGGYKEVVVMITG 167

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTY 233
            N Y  LK E G HR+ R+   ++  R HTS +++ V P  +D    + I   D R D Y
Sbjct: 168 NNVYSKLKFESGAHRVQRVPVTETQGRVHTSTATVGVMPEFEDVDATDLIDPKDVREDVY 227

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVN T SA+R+TH PTG+ V  Q ERSQ +N+A+AW +L A++Y+   Q+ E
Sbjct: 228 RSSGAGGQHVNKTSSAIRLTHEPTGITVAMQDERSQQQNRAKAWKILNARVYDYFAQQNE 287

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             A   +  KT +G G    +IR+Y   P   V D R  +       V++G+L+D + A 
Sbjct: 288 --AEYAQKRKTAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELEDIIDAL 344

Query: 351 L 351
           +
Sbjct: 345 I 345


>gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [Dietzia cinnamea P4]
 gi|319437888|gb|EFV92872.1| peptide chain release factor 1 [Dietzia cinnamea P4]
          Length = 361

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 125/343 (36%), Positives = 180/343 (52%), Gaps = 11/343 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +     L  +  DP L ++   A+ + +    L   +   + +     D     ELA
Sbjct: 13  DDVLSEYGGLEAQLSDPTLHEDAAAARRVGKRFAELTPIVQCHRALVSTRDDAAAARELA 72

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
              DD S  +E +D L     E+E +  + L   +  D++D  +E+ +G GG ES  +A 
Sbjct: 73  --GDDPSFAEE-ADRLDAEAAELEARLADLLAPRDPHDADDVVMEIKSGEGGEESALFAA 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--PNAYG-W--LKGEQGVHRL 190
            L RMYTR+AEK  +  E L + + +  G K A+  I+   P+  G W  LK E GVHR+
Sbjct: 130 DLARMYTRYAEKHGWIVEVLGVTESDLGGYKDASFSIRSRQPSRDGVWSRLKFEGGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V+P  +D   +EI ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 190 QRVPVTESQGRVHTSAAGVLVFPEPEDVGPVEIDESDLRIDVYRSSGKGGQGVNTTDSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG VV CQ ERSQ +NK +A  +L A+L     +     A  G +S+   +   
Sbjct: 250 RITHLPTGTVVTCQNERSQLQNKQRALQVLAARLQAAAEEAAGAEAAEGRASQVRTVDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   + D R   +  +   VLDGDLD  + A  A
Sbjct: 310 ERIRTYNY-PENRIADHRVGFKAHNLDAVLDGDLDAVLDALAA 351


>gi|291397162|ref|XP_002714988.1| PREDICTED: mitochondrial translational release factor 1-like
           [Oryctolagus cuniculus]
          Length = 380

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/246 (41%), Positives = 142/246 (57%), Gaps = 9/246 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLVLEVTAGIGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + ++  D 
Sbjct: 181 SASIGGSEAYKLMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTE-INLVVNPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KN+  A   L AKLY + 
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNREMAMKKLCAKLYSMH 299

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
           L+  EE +    + K ++G  GR  +IR+Y   P   V D R N         + GD  L
Sbjct: 300 LE--EETSKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSVHDLEAFMKGDYQL 356

Query: 344 DDFMKA 349
           D+ +++
Sbjct: 357 DEMIQS 362


>gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977]
 gi|238688924|sp|B1MLV1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium
           abscessus]
          Length = 356

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/277 (42%), Positives = 158/277 (57%), Gaps = 19/277 (6%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTES 130
           L  DD S   E ++      LE    + E+ LS         D +D  LEV +G GG ES
Sbjct: 66  LSADDPSFADEVTE------LESSIAELETQLSDMLAPRDPHDGDDILLEVKSGEGGEES 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQ 185
             +A  L RMY R+AE+  +K   L+  + +  G K ATL I  KG +A G W  LK E 
Sbjct: 120 ALFAADLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEG 179

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + VYP  ++  EI+I ESD RID YR+SG GGQ VNT
Sbjct: 180 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDESDLRIDVYRSSGKGGQGVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++ +  A+ G +S+  
Sbjct: 240 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIR 299

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +    +IR+Y   P   + D R   +  +   VLDG
Sbjct: 300 TVDRSERIRTYNF-PENRITDHRVGFKAHNLDQVLDG 335


>gi|321310997|ref|YP_004193326.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802841|emb|CBY93487.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
          Length = 364

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 143/243 (58%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ + AGG ES  +   L   Y R+A+   +K   L I +    G+      +
Sbjct: 111 DEKNVIVEMRSAAGGDESTIFVENLFDTYKRYADMNNWKLTILNIQENS-IGMHFLAFSL 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  +K E GVHR+ R+   +S  R HTS  ++ V P  DD IEI I  SD RID 
Sbjct: 170 SGKNVFSKMKFESGVHRVQRVPATESKGRVHTSTITVSVMPEQDD-IEINIDPSDLRIDV 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+S+VRITH+PTG+VV CQQE+SQ +N+A A  MLR+KL+E E +K+
Sbjct: 229 YRASGAGGQHVNKTESSVRITHLPTGIVVACQQEKSQIQNRAFAMKMLRSKLWEHEQEKQ 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348
            +   I E+ + +IG G    +IR+Y   P   + D R ++     ++++  GDL +  +
Sbjct: 289 SK--EIAETVRKQIGRGFRCEKIRTYNY-PQNRITDHRVSLTLNKLNEIMIGGDLTEIHE 345

Query: 349 ATL 351
           + L
Sbjct: 346 SLL 348


>gi|189218443|ref|YP_001939084.1| protein chain release factor A [Methylacidiphilum infernorum V4]
 gi|189185301|gb|ACD82486.1| Protein chain release factor A [Methylacidiphilum infernorum V4]
          Length = 377

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/308 (35%), Positives = 171/308 (55%), Gaps = 19/308 (6%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L  E + ++NA S ++ +     D  I  ELA +E     +   S+ +Q + + +     
Sbjct: 49  LYGELKQIENAKSSVESLAKETVDPEIQ-ELAQQE-----ITRLSNKIQELTMAI----L 98

Query: 105 ESLLSGEAD--SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
            SL   E +  S +  +E+ AG GG E+  +A  L RMY+++AEK+ +K E L  +  E 
Sbjct: 99  GSLFPPEENKSSKNVIIEIRAGTGGEEAALFAADLYRMYSKYAEKKGWKQELLHFNPSEL 158

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K     ++G  A+  +K E GVHR+ R+   +S  R HTS +++ V  +  + +E++
Sbjct: 159 GGLKEVIFTVQGKEAFRKMKFESGVHRVQRVPATESQGRIHTSTATVAVL-LETEEVELD 217

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   D RI+  RASG GGQ VNTTDSAV++ HIP+G++V+CQ ERSQ KNK +A  +L+A
Sbjct: 218 IKAEDLRIEVCRASGPGGQGVNTTDSAVQVFHIPSGIMVRCQDERSQIKNKEKALKILKA 277

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +L  L  ++ EE     +  K+ IG G    +IR+Y   P   V D R  I   +    +
Sbjct: 278 RL--LARKQEEEAQKRAQERKSMIGSGERTEKIRTYNF-PQGRVTDHRIPITLYNLQSFM 334

Query: 340 DGDLDDFM 347
           DGD+D  +
Sbjct: 335 DGDIDPIV 342


>gi|182435969|ref|YP_001823688.1| peptide chain release factor 1 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776593|ref|ZP_08235858.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
 gi|238689014|sp|B1W0B6|RF1_STRGG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|178464485|dbj|BAG19005.1| putative peptide chain release factor 1 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326656926|gb|EGE41772.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
          Length = 358

 Score =  168 bits (426), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D  D  LE+ AGAGG ES  +A  LLRMY R+AE+  +KTE ++  + E  G K   + 
Sbjct: 99  SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158

Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           +K          G   +  +K E GVHR+ R+   +S  R HTS + + V P  ++ +++
Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI  +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR
Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277

Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           ++L    +    +E +++  S    +    +IR+Y   P   + D R   +  +   VLD
Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336

Query: 341 GDLDDFMKATL 351
           G+LD  ++A +
Sbjct: 337 GELDAVIQACV 347


>gi|162457313|ref|YP_001619680.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
 gi|229470353|sp|A9G9L1|RF1_SORC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161167895|emb|CAN99200.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
          Length = 364

 Score =  168 bits (426), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 144/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ +G GG E+  +A  L RM  R+AE +++K E L + +    G K    LI
Sbjct: 105 DTRNTVIEIRSGEGGEEAALFAADLFRMLCRYAETKRWKVEVLNLSEASAGGYKEVAALI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  L+ E GVHR+ R+   ++  R HTS +++ V P  D+ +++ I E D  I  
Sbjct: 165 TGQDVYSHLRYEGGVHRVQRVPSTETQGRIHTSTATVAVLPEADE-VDVHIDEKDLEISI 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
             + G GGQ VNTT+SAV+I H+PTG++V+CQ ERSQ KNKA+A  +LR++L ELE Q+R
Sbjct: 224 AASGGPGGQGVNTTNSAVQIKHLPTGMIVKCQDERSQLKNKAKAMKVLRSRLLELE-QRR 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E A   E  +T +G G   +++R+Y   P   V D R  +       +++GDL++ + A
Sbjct: 283 QEEAQSAE-RRTMVGTGERAQKVRTYNF-PQNRVTDHRIGLTLHKLDKIIEGDLEELIGA 340


>gi|73946154|ref|XP_541157.2| PREDICTED: similar to mitochondrial translational release factor
           1-like [Canis familiaris]
          Length = 280

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/224 (44%), Positives = 133/224 (59%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 21  SEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 80

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 81  SASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 139

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RI T RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + 
Sbjct: 140 RIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 199

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE +    + K ++G  GR  +IR+Y   P   V D R N
Sbjct: 200 LE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRIN 240


>gi|32475815|ref|NP_868809.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|81659907|sp|Q7ULT3|RF1_RHOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32446358|emb|CAD76186.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|327538345|gb|EGF25018.1| peptide chain release factor 1 [Rhodopirellula baltica WH47]
          Length = 360

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 185/340 (54%), Gaps = 17/340 (5%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQH-----LDNAISFIKEIQDRLCDNLILLELA 76
           R   L     DP +  +   A+M    R+H     L N     K + D +   + ++  A
Sbjct: 15  RFEKLENDMSDPEVLSD--GARMSATAREHGGLNRLANQYRTFKRLTDEIHQCVAMVADA 72

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWA 134
            + D+  + +   ++L++ + E  ++   SL  G  DS+     +E+ AG GG E+  +A
Sbjct: 73  EDVDEREMAESEMESLRKER-ETVWEDLLSLTVGGEDSHRTRCVMEIRAGTGGDEAALFA 131

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  MYTR+AEK  +KTE ++    E  G K  TL ++G N +  L+ E G HR+ R+ 
Sbjct: 132 RDLFEMYTRYAEKVGWKTELMDASPTEMGGFKDVTLTLEGDNVFRDLQYESGGHRVQRVP 191

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  +D +EI++   D R D + ASG GGQHVN TDSAVR+TH
Sbjct: 192 ETETQGRVHTSAATVAVMPEPED-VEIDLKPDDYRKDFFGASGPGGQHVNKTDSAVRLTH 250

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
             TG+VVQCQ E+SQHKN A+A  +L+A++Y  E ++ EE A   E+ K  IG G   ++
Sbjct: 251 HETGIVVQCQDEKSQHKNLAKALRVLKARIY--EKKREEEAAKQAEARKGLIGSGDRSQR 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   + D R N+       ++ GDL+   +A +
Sbjct: 309 IRTYNF-PQNRLTDHRINLTIYKLDQIIAGDLNPVTEALI 347


>gi|108804488|ref|YP_644425.1| peptide chain release factor 1 [Rubrobacter xylanophilus DSM 9941]
 gi|119361598|sp|Q1AVG5|RF1_RUBXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108765731|gb|ABG04613.1| bacterial peptide chain release factor 1 (bRF-1) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 364

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 142/246 (57%), Gaps = 7/246 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LE+ AG GG E+  +A  L  MY R+A++  F+   L+    E  G K   + I
Sbjct: 110 DDKDVILEIRAGTGGDEAALFAGDLYEMYARYADRLGFRHRVLDASPAEVGGYKEIIVEI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY   K E G HR+ R+   +S  R HTS +++ V P  ++ +E+EI+ +D  ID 
Sbjct: 170 EGDGAYSVFKHEGGTHRVQRVPKTESQGRIHTSTATVAVLPEAEE-VEVEINPNDLEIDV 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SG GGQ VNTTDSAVRITH PTG+VV CQ E+SQ +NK QA  +LR++L  LE + R
Sbjct: 229 YRSSGPGGQSVNTTDSAVRITHKPTGLVVTCQNEKSQLQNKEQALRILRSRL--LEREMR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E     G+    + G G    +IR+Y   P   + D R  +   +   VL G+L++F KA
Sbjct: 287 ERQEREGQMRLAQFGSGDRSAKIRTYNF-PQGRITDHRVGLTVHNLEAVLGGELEEFTKA 345

Query: 350 TLAIKK 355
             A ++
Sbjct: 346 LAAKER 351


>gi|325186400|emb|CCA20906.1| peptide chain release factor 1 putative [Albugo laibachii Nc14]
          Length = 397

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/282 (38%), Positives = 159/282 (56%), Gaps = 13/282 (4%)

Query: 79  EDDCSILQETSDNLQRIK---LEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWA 134
           ++D  ++Q   + LQ  K   + +E      LL  + AD  +  LE+ AG GG E+  +A
Sbjct: 106 QNDKELIQLAKEELQEAKEDAIALEKSLTRQLLPRDPADDKNCILEIRAGTGGEEACLFA 165

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           N LL++Y + A  R +  + L I   +  G K     I+G   YG  K E GVHR+ R+ 
Sbjct: 166 NDLLKLYQKIAIMRNWHFQILSISHTDLGGCKECVCTIQGRGVYGQTKFESGVHRVQRVP 225

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             D   R HTS  S+ V P +++ IE+E++  + RID YRASG+GGQHVNTT+SAVRITH
Sbjct: 226 INDV--RVHTSAVSVVVLPEIEE-IEMELNPKELRIDVYRASGSGGQHVNTTESAVRITH 282

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+    Q ERSQH+NKA+A ++LRA++Y+    +R+  +   +    +IG G    +
Sbjct: 283 IPTGIQAAVQDERSQHQNKAKAMSILRARVYDQMRDQRD--SKRHQLRSLQIGSGDRSER 340

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IR+Y   P   V D R N+        L+G+L D +   L +
Sbjct: 341 IRTYNF-PQSRVSDHRVNVTLYGIERFLNGELMDPLVDALVL 381


>gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
 gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97]
 gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11]
 gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|215403141|ref|ZP_03415322.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|215410938|ref|ZP_03419746.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426621|ref|ZP_03424540.1| peptide chain release factor 1 [Mycobacterium tuberculosis T92]
 gi|215430186|ref|ZP_03428105.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|215445477|ref|ZP_03432229.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|218753007|ref|ZP_03531803.1| peptide chain release factor 1 [Mycobacterium tuberculosis GM 1503]
 gi|219557200|ref|ZP_03536276.1| peptide chain release factor 1 [Mycobacterium tuberculosis T17]
 gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186238|ref|ZP_05763712.1| peptide chain release factor 1 [Mycobacterium tuberculosis CPHL_A]
 gi|260200352|ref|ZP_05767843.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|260204557|ref|ZP_05772048.1| peptide chain release factor 1 [Mycobacterium tuberculosis K85]
 gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554911|ref|ZP_06444121.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54039048|sp|P66017|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041593|sp|P66016|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223571|sp|A1KI87|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223574|sp|A5U1Z8|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790891|sp|C1AMU3|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1322423|emb|CAA97732.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           tuberculosis H37Rv]
 gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           bovis AF2122/97]
 gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           F11]
 gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289439543|gb|EFD22036.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           W-148]
 gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           4207]
          Length = 357

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 143/249 (57%), Gaps = 7/249 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D  LEV +G GG ES  +A  L RMY R+AE+  +    L+    +  G K ATL I
Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAI 162

Query: 173 KG----PNA-YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
                 P+  +  +K E GVHR+ R+   +S  R HTS + + VYP  ++  +++I ESD
Sbjct: 163 ASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +
Sbjct: 223 LRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAM 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++    A+   +S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  
Sbjct: 283 AEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNLDQVLDGDLDAL 341

Query: 347 MKATLAIKK 355
             A  A  K
Sbjct: 342 FDALSAADK 350


>gi|226329845|ref|ZP_03805363.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
 gi|225200640|gb|EEG82994.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
          Length = 274

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/160 (50%), Positives = 108/160 (67%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY+R+AE R+++ E +  ++GE  G K     +
Sbjct: 107 DEFNCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWRIEVMNANEGEHGGYKEVIAKV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYG LK E G HR+ R+   +S  R HTS  ++ V   V ++   +IS SD RIDT
Sbjct: 167 VGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVAVLAEVPEAELPDISPSDLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHK 
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKK 266


>gi|257069075|ref|YP_003155330.1| peptide chain release factor 1 [Brachybacterium faecium DSM 4810]
 gi|256559893|gb|ACU85740.1| bacterial peptide chain release factor 1 (bRF-1) [Brachybacterium
           faecium DSM 4810]
          Length = 378

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 18/290 (6%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDW 133
           AL E D  + +E +    R +LE E +  E LL+     D+ D  LE+ AGAGG ES  +
Sbjct: 71  ALGEGDEELAREAAQ--LRERLEQEREHLEDLLAPRDPDDARDVILEIKAGAGGEESALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGEQG 186
           A  +LRMY  +AE + ++ E L   + E  G K  T+ I            Y  LK E G
Sbjct: 129 AAEMLRMYRAYAESQGWRVEVLTSAESELGGFKDVTVAIAARGAGGSGSGVYAHLKHEAG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-----SESDCRIDTYRASGAGGQ 241
           VHR+ R+   +S  R HTS   + V P  D++ E E+     + ++ RID +R+SG GGQ
Sbjct: 189 VHRVQRVPVTESQGRIHTSAVGVLVLPEADEADESELLAEAMAPANLRIDVFRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVVV CQ ++SQ +N+ QA  +LR +L +    ++E  ++    
Sbjct: 249 SVNTTDSAVRITHLPTGVVVSCQDQKSQLQNREQALRILRTRLLDARRAEQEAQSSAARR 308

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   V D RT  +  + + VL GDL+D + ++
Sbjct: 309 SQVRTVDRSERIRTYNF-PESRVADHRTGYKAGNLAQVLSGDLEDLIASS 357


>gi|229823150|ref|ZP_04449219.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
 gi|229787316|gb|EEP23430.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
          Length = 359

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 179/340 (52%), Gaps = 13/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLIL 72
            D  + R   L+    DP +  +    + L  E   L   ++ IK   ++Q  + D   +
Sbjct: 5   LDALIFRFEELHELLSDPEVISDSKRLRELTIEEADLSPKVAKIKRYKQVQQEIKDTEEM 64

Query: 73  LELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L   L+ D   + +     L  ++ +LE E K    L     D  +  +E+   AGG E+
Sbjct: 65  LGEGLDADMAELAKMELAELKAEKPRLEEEIKVM-MLPEDPNDGKNIIMEIRGAAGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL MYTR+A+ + +K E L+ +     G K  +L+I G   Y  LK E G HR+
Sbjct: 124 QLFAGDLLNMYTRYADSQGWKVEVLDANITGIGGYKEVSLMITGHKVYSKLKFENGAHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P  ++ +++++ ++D R+D Y ASGAGGQHVN T SAV
Sbjct: 184 QRVPETESQGRVHTSTATVVVMPEAEE-VDLDLKDADIRVDIYHASGAGGQHVNKTASAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++Y++ LQ  E  A    + K  +G G 
Sbjct: 243 RLTHLPTGVVVAMQDERSQLKNREKAMKVLRARVYDM-LQS-EAQAEYDSNRKLAVGTGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +IR+Y   P   V D R  +       ++ G LD+ +
Sbjct: 301 RSERIRTYNY-PQNRVTDHRIGLTIQQLDAIMSGKLDEII 339


>gi|308071169|ref|YP_003872774.1| peptide chain release factor 1 [Paenibacillus polymyxa E681]
 gi|305860448|gb|ADM72236.1| Peptide chain release factor 1 (RF-1) [Paenibacillus polymyxa E681]
          Length = 355

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/240 (37%), Positives = 146/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L RMYTR+A+ + ++ E ++ +  +  G K    +I
Sbjct: 106 DDKNVIIEIRGAAGGDEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ RI   +S  R HTS S++ V P  ++ ++IEIS+ D R+DT
Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVSVMPEAEE-VDIEISDKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+TH+PTG++  CQ  +SQ+ NK +A  +LRA++ ++ L++ 
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHMPTGIMATCQDGKSQNSNKEKALQVLRARISDM-LRQE 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE    GE  K+++G G    +IR+Y   P   V D R  +       V++G++++ + A
Sbjct: 284 EEAKYAGE-RKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSA 341


>gi|117927849|ref|YP_872400.1| peptide chain release factor 1 [Acidothermus cellulolyticus 11B]
 gi|166223522|sp|A0LSK4|RF1_ACIC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117648312|gb|ABK52414.1| bacterial peptide chain release factor 1 (bRF-1) [Acidothermus
           cellulolyticus 11B]
          Length = 364

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/259 (41%), Positives = 154/259 (59%), Gaps = 10/259 (3%)

Query: 98  EVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           E   ++  SLL+  AD ND     +++ AG GG ES  +A  LLRMY R+AE+R +KTE 
Sbjct: 83  EAVAERLRSLLA-PADPNDGKDVIMQIKAGEGGEESALFAGDLLRMYLRYAERRGWKTEI 141

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           L+  + +  G K  T+ I+   + G W  LK E GVHR+ R+   +S  R HTS   + V
Sbjct: 142 LDATESDLGGYKDVTVAIRADGSEGAWSRLKFEGGVHRVQRVPVTESQGRIHTSAVGVLV 201

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  ++ ++++I  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +
Sbjct: 202 MPEAEE-VDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQ 260

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK  A  +LR++L  L  ++ E  A     S+   +    +IR+Y   P   + D R N 
Sbjct: 261 NKETALRILRSRLLALAQEEAEAQAAAQRRSQVRTVDRSERIRTYNF-PENRISDHRVNY 319

Query: 331 EKTSPSDVLDGDLDDFMKA 349
           +  +   VLDGDLD  ++A
Sbjct: 320 KAYNLDQVLDGDLDGVIQA 338


>gi|326403021|ref|YP_004283102.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
 gi|325049882|dbj|BAJ80220.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
          Length = 352

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 7/241 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+   AGG E+  +A  L   Y R+A+ R ++ E L+  + E  G++     
Sbjct: 101 ADERPAILEIRPAAGGDEAALFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAE 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS  ++ V P  +D +++E++E+D RID
Sbjct: 161 ITGRAVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPEAED-VDVEVNEADLRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASGAGGQHVN T+SAVRITH+PTG+VV  Q+ERSQHKN+A+A  +LRA+LYE     
Sbjct: 220 VFRASGAGGQHVNKTESAVRITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAA 279

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
                      K+++G G    +IR+Y   P   V D R N+       V+ G+ D+ + 
Sbjct: 280 AAAGRA--ADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIID 336

Query: 349 A 349
           A
Sbjct: 337 A 337


>gi|254293181|ref|YP_003059204.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
 gi|254041712|gb|ACT58507.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
          Length = 359

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 8/235 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +A LEV AG GG E+  +A  L RMY R+A+ + +K +     +G+  G K    
Sbjct: 106 EDDEANAMLEVRAGTGGDEAALFAGDLFRMYQRYAQIQGWKLDIESQSEGDAGGYKEIIA 165

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G   +G +K E GVHR+ R+   +S  R HTS +S+ V P   + + IEI   + RI
Sbjct: 166 SVTGKGVFGKMKFESGVHRVQRVPKTESAGRIHTSAASVAVLP-APEQVNIEIKPEEIRI 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT R+SGAGGQHVNTTDSAVRI H+PT ++V    E+SQH N+A+A  ML+ +LYE E  
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRIIHLPTNIMV-TSSEKSQHANRARAMEMLKIRLYEKE-- 281

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           + E+ A + ++ KT++G G    +IR+Y   P   V D R  +       +L GD
Sbjct: 282 RAEKDAAMADARKTQVGSGDRSEKIRTYNF-PENRVSDHRIKLTLYKLEQILAGD 335


>gi|166368082|ref|YP_001660355.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
 gi|189039979|sp|B0JYC5|RF1_MICAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166090455|dbj|BAG05163.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
          Length = 366

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 150/243 (61%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+R+Y+++AE + +K   L     +  G K A L I
Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG N Y  LK E GVHR+ R+   +++ R HTS +++ + P VDD +E+ I   D  + T
Sbjct: 172 KGDNVYSKLKFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDD-VEVHIDPKDIELTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C +ERSQ +N+ +A  +LRAKLY+++LQ++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +    ++++G G    +IR+Y  +  ++  D R N +  S   +LDGD+++ +++
Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNRLT-DHRLN-QNFSLDRILDGDIEEVIQS 346

Query: 350 TLA 352
            +A
Sbjct: 347 CIA 349


>gi|148260023|ref|YP_001234150.1| peptide chain release factor 1 [Acidiphilium cryptum JF-5]
 gi|166223523|sp|A5FX99|RF1_ACICJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146401704|gb|ABQ30231.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
          Length = 352

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 7/241 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A LE+   AGG E+  +A  L   Y R+A+ R ++ E L+  + E  G++     
Sbjct: 101 ADERPAILEIRPAAGGDEAALFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAE 160

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +  LK E GVHR+ R+   ++  R HTS  ++ V P  +D +++E++E+D RID
Sbjct: 161 ITGRAVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPEAED-VDVEVNEADLRID 219

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASGAGGQHVN T+SAVRITH+PTG+VV  Q+ERSQHKN+A+A  +LRA+LYE     
Sbjct: 220 VFRASGAGGQHVNKTESAVRITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAA 279

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
                      K+++G G    +IR+Y   P   V D R N+       V+ G+ D+ + 
Sbjct: 280 AAAGRA--ADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIID 336

Query: 349 A 349
           A
Sbjct: 337 A 337


>gi|114797902|ref|YP_759355.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
 gi|119361550|sp|Q0C4I8|RF1_HYPNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114738076|gb|ABI76201.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
          Length = 352

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 146/243 (60%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LEV AG GG E+  +A  L RMYTR+A+   +  E +++  G+  G K     +
Sbjct: 100 DKADIVLEVRAGTGGDEAALFAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANV 159

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G +K E GVHR+ R+   ++  R HTS +++ V P   ++IEIE+   D RIDT
Sbjct: 160 SGDGVFGRMKWESGVHRVQRVPATETQGRIHTSAATVAVLPA-PENIEIEVRADDIRIDT 218

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SGAGGQHVNTTDSAVRITH+PTG++V    E+SQH N+ +A + L+ +LYE E  + 
Sbjct: 219 MRSSGAGGQHVNTTDSAVRITHLPTGIMV-TSSEKSQHVNREKAMDQLKIRLYERE--RA 275

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           E+ A   E+  ++IG G   +++R+Y   P   + D R  +   S   ++ GD L D ++
Sbjct: 276 EKDAARSEARASQIGSGDRSQKVRTYNY-PENRLTDHRIGLTLYSLDRIITGDKLGDVIE 334

Query: 349 ATL 351
           A +
Sbjct: 335 ALI 337


>gi|303232564|ref|ZP_07319250.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
 gi|302481351|gb|EFL44425.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
          Length = 354

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/325 (37%), Positives = 175/325 (53%), Gaps = 15/325 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCS 83
           L  K  DP +  +  E   + +E  H    ++  KE    L D     E+  E   D+  
Sbjct: 15  LEKKMVDPAVVADQKEYTRIAKEHAHQSELVALAKEYIAALDDIEAAKEMLHEASSDERE 74

Query: 84  ILQ-ETSDNLQRIK-LEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140
           +LQ + + N +++  LE + K    L+ G+  D  D  +E+ A AGG E+  +A  L +M
Sbjct: 75  MLQADIAANEEKLPALEDDIKIM--LIPGDPNDEKDTIVEIRAAAGGDEAAIFAGDLYKM 132

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+A+ + +K E L     E  G K+    + G   Y  +K E GVHR+ R+   +S  
Sbjct: 133 YERFADSKHWKIEVLSSSPSEAGGFKTIEFKMLGDKVYSVMKYESGVHRVQRVPKTESQG 192

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R  TS +++ V P  D+ I+++I  +D RIDTY ASG GGQ VNTT SAVRITH+PT  V
Sbjct: 193 RIQTSTATVAVLPEADE-IDVQIDPTDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTV 251

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           VQ Q +RSQ +N+     MLRA+LYE+EL+K++  A  G    ++IG G    +IR+Y  
Sbjct: 252 VQSQDQRSQIQNREVCMQMLRARLYEMELEKQQ--AEQGAERLSQIGRGNRSEKIRTYN- 308

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGD 342
           QP   V D R     T  + VL GD
Sbjct: 309 QPQDRVTDHRIGFNSTY-NGVLLGD 332


>gi|288922982|ref|ZP_06417139.1| peptide chain release factor 1 [Frankia sp. EUN1f]
 gi|288345658|gb|EFC80030.1| peptide chain release factor 1 [Frankia sp. EUN1f]
          Length = 356

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 180/335 (53%), Gaps = 14/335 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +  DP +  +   A+ L R    L   +     ++    D     ELA  E D S  
Sbjct: 15  IEKRLADPAIHNDPSVARELSRRYAELATPVDLALRLESVEGDLEAARELA--EQDASFR 72

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E +  L+  + E+  +    L+  + D S DA LEV AGAGG ES  +A  LLRMY R+
Sbjct: 73  DEIT-ALEDSRAELASRLRAYLVPTDPDDSRDAILEVKAGAGGEESALFAGDLLRMYLRY 131

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPN--AYGWLKGEQGVHRLVRISPYD 197
           AE+R ++TE L+ +  +  G +  ++ +K     GP    +G L+ E GVHR+ R+   +
Sbjct: 132 AERRGWRTEILDANPSDLGGYRDVSVAVKARGSAGPGQGVFGRLRFEGGVHRVQRVPVTE 191

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS + + V P     +++++  +D RID +R+SG GGQ VNTTDSAVRITH+PT
Sbjct: 192 SAGRIHTSAAGVLVLPEAA-DVDVDVDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 250

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYV 316
           GVVV CQ E+SQ +NK  A  +LR++L     +K E  A    +S+   +    +IR+Y 
Sbjct: 251 GVVVSCQNEKSQLQNKESAMRILRSRLLAAAREKAESEAAAARASQVRTVDRSEKIRTYN 310

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   + D R N +  +   VLDGDLD  + A +
Sbjct: 311 F-PENRISDHRINYKAHNLEQVLDGDLDAVVDALI 344


>gi|126311212|ref|XP_001381267.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Monodelphis domestica]
          Length = 567

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/224 (45%), Positives = 132/224 (58%), Gaps = 7/224 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LE+ AG GG E+  +   +  MY R+A  +K+  E LE    E  G++ A
Sbjct: 124 SEETDENDLILELTAGVGGQEAMLFTAEMFDMYQRYATYKKWHFEILEYFPSEIGGLRHA 183

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I GP AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  + 
Sbjct: 184 SASIGGPEAYRHMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAILPQPTE-INLVINPKEL 242

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RI+T RASGAGGQHVNTTDSAVRI H+PTGV  +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 243 RIETKRASGAGGQHVNTTDSAVRIVHLPTGVATECQQERSQIKNKEMAMKKLRAKLYSML 302

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329
           L+  EE      + K +IG  GR  +IR+Y   P   V D R +
Sbjct: 303 LE--EETNKRYSARKIQIGTKGRSEKIRTYHF-PQNRVTDHRIS 343


>gi|183222627|ref|YP_001840623.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912661|ref|YP_001964216.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|238687790|sp|B0SH84|RF1_LEPBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687821|sp|B0SQV0|RF1_LEPBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167777337|gb|ABZ95638.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167781049|gb|ABZ99347.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 353

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/251 (39%), Positives = 143/251 (56%), Gaps = 12/251 (4%)

Query: 107 LLSGEADSNDAYL-EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           LL  + +S  + L E+ AG GG ES  +   L RMY ++A+K+  + E +++      G 
Sbjct: 96  LLPPDPNSGKSILVEIRAGTGGEESGLFCADLFRMYNKYADKKGLRVEIIDMSQTGIGGY 155

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     +    AY   K E G HR+ RI   +S  R HTS  ++ + P  ++  E+EI E
Sbjct: 156 KEIVFSLDDDKAYDLFKFESGTHRVQRIPETESGGRIHTSAVTVAILPEAEEK-EVEIKE 214

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RID YR+SGAGGQHVNTTDSAVRITHIPTG+VV  Q+ERSQ KN+ +A  +LRA++ 
Sbjct: 215 SDLRIDVYRSSGAGGQHVNTTDSAVRITHIPTGIVVASQEERSQIKNRDKAMRVLRARIA 274

Query: 286 ELELQKREEIANIGESS--KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +    +  E A +   +  K ++G G    +IR+Y   P     D R      +   +++
Sbjct: 275 D----QAAETAKLSADALKKAQVGSGDRSERIRTYNF-PQGRCTDHRIGFTSHNLPAIME 329

Query: 341 GDLDDFMKATL 351
           GDLD+ + A +
Sbjct: 330 GDLDELIDALI 340


>gi|34557214|ref|NP_907029.1| peptide chain release factor 1 [Wolinella succinogenes DSM 1740]
 gi|46576699|sp|Q7M9M4|RF1_WOLSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34482930|emb|CAE09929.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Wolinella succinogenes]
          Length = 355

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 141/244 (57%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +   L + Y R+A+ + +K E +   +    G K    LI
Sbjct: 104 DDKNIYLEIRAGTGGDEAGIFVGDLFKSYCRYADLKGWKVEIISSSENSVGGYKEVIALI 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ +D +ID 
Sbjct: 164 KGNGVYSRLKYEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVNINPNDLKIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+ G GGQ VNTTDSAVRITH+PTG+ V  Q E+SQHKNK +A  +L+A+LYE EL+ +
Sbjct: 223 FRSGGHGGQSVNTTDSAVRITHLPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAK 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348
             ++    + K ++G G    +IR+Y   P   + D R  +   S  ++ L G+ D  + 
Sbjct: 283 --LSENSAARKLQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEIMLSGNFDQVVD 339

Query: 349 ATLA 352
             +A
Sbjct: 340 PIVA 343


>gi|170070084|ref|XP_001869460.1| peptide chain release factor 1 [Culex quinquefasciatus]
 gi|167866004|gb|EDS29387.1| peptide chain release factor 1 [Culex quinquefasciatus]
          Length = 425

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 157/261 (60%), Gaps = 17/261 (6%)

Query: 66  LCDNLI-LLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLE 120
           + DNL  L E+  E+D+    +++E  +    I  +++ +  + +LS   E D +   LE
Sbjct: 114 IVDNLSSLAEMGAEKDEDMLQLMKEEKEAYTNILRKLDGEIMDGILSMDEEEDYSSLILE 173

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V AG GG E+  +A  +  MY  + E + ++ E L+  D E  GI+ A+++I G +AY +
Sbjct: 174 VAAGVGGQEAMLFAREVFDMYCGFVEFKGWEIEMLQTEDTELGGIRHASMVINGRDAYRF 233

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ RI   + ++R HTS +++ V P  D+  +IE+ + D +I+T RASGAGG
Sbjct: 234 LKFEAGVHRVQRIPSTEKSARIHTSTATVSVLPRPDE-FQIELKDKDLKIETKRASGAGG 292

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----- 295
           QHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A   L AKL + EL+ +        
Sbjct: 293 QHVNTTDSAVRIVHLPTGMAVECQTERSQGKNKEIAKQKLLAKLTQQELESKFNAKQSLK 352

Query: 296 -ANIGESSKTEIGWGRQIRSY 315
            + +G S++ E     +IR+Y
Sbjct: 353 KSQVGSSTRNE-----KIRTY 368


>gi|16804581|ref|NP_466066.1| peptide chain release factor 1 [Listeria monocytogenes EGD-e]
 gi|224500713|ref|ZP_03669062.1| peptide chain release factor 1 [Listeria monocytogenes Finland
           1988]
 gi|224503217|ref|ZP_03671524.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561]
 gi|255029752|ref|ZP_05301703.1| peptide chain release factor 1 [Listeria monocytogenes LO28]
 gi|20139329|sp|Q8Y4A8|RF1_LISMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16412031|emb|CAD00621.1| prf1 [Listeria monocytogenes EGD-e]
          Length = 358

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 191/351 (54%), Gaps = 20/351 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           ++D   AV+ R   LN    DP +  +    + L +E+  +   +   +E   + +++ +
Sbjct: 1   MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              LL   L+++   + +E    LQ+ K ++E +    LL    D ND     LE+   A
Sbjct: 61  TKELLGEKLDDEMREMAKEEFAELQKEKTDLEERL--KLLLVPKDPNDDKNVILEIRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E 
Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSK 303
           T SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K
Sbjct: 238 TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RK 293

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +G G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 294 SAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|34539945|ref|NP_904424.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
 gi|46576709|sp|Q7MXT5|RF1_PORGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34396256|gb|AAQ65323.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
          Length = 361

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 141/242 (58%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  G GG E+  +A  L RMY ++ E + ++ E  ++ +G   G K     +
Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   YG LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++EI+ +D  + T
Sbjct: 171 KGEGVYGILKYESGVHRVQRVPATETQGRIHTSAATVAVLPEAEE-VDVEINPADIEMQT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++ V++TH PTG+VV CQQ RSQ  N+  A  MLR+KLY++EL K 
Sbjct: 230 SRSGGAGGQNVNKVETKVQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKH 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E   I    KT +  G    +IR+Y   P   V D R N+   + S V+DG++  F+ A
Sbjct: 290 NEA--IAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDA 346

Query: 350 TL 351
            +
Sbjct: 347 LI 348


>gi|327404087|ref|YP_004344925.1| peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM
           16823]
 gi|327319595|gb|AEA44087.1| bacterial peptide chain release factor 1 (bRF-1) [Fluviicola
           taffensis DSM 16823]
          Length = 359

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 171/313 (54%), Gaps = 20/313 (6%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQF 104
           R+ + +D A    K + D L  +  +LE+  + +   + +   + L  QR  +E E K  
Sbjct: 42  RDLEEVDAAYKSYKNVLDNLKSSKEMLEVETDPEMREMAKMEINELEQQRPIIEEEIKVL 101

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
                 E D N A +E+ AG GG E+  +   + RMYT + ++  +  E +   +G   G
Sbjct: 102 LIPKDPEDDKN-AIIELRAGTGGDEACIFVEDIYRMYTMYFKEMGWAYEIVNSSEGSAKG 160

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K  ++ I G   YG LK E GVHR+ R+   +S  R HTS  ++ V P  ++ ++ E+ 
Sbjct: 161 YKEVSMSISGAGIYGMLKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDFELD 219

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D R DT+RASGAGGQH+N T+SA+R+THIPTG VV+CQ  RSQHKN AQA ++LR++L
Sbjct: 220 MNDVRKDTFRASGAGGQHINKTESAIRLTHIPTGTVVECQDGRSQHKNLAQAISVLRSRL 279

Query: 285 YELELQK--------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           Y+ EL +        R+ + + G+ S        +IR+Y   P   + D R N    + S
Sbjct: 280 YQAELDRVHQERAAHRKTLVSTGDRSA-------KIRTYNY-PQGRITDHRINKTIYNLS 331

Query: 337 DVLDGDLDDFMKA 349
             ++GD+ + + A
Sbjct: 332 AFMNGDVQEMIDA 344


>gi|158520489|ref|YP_001528359.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
 gi|238686878|sp|A8ZTL8|RF1_DESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158509315|gb|ABW66282.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
          Length = 356

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 158/278 (56%), Gaps = 11/278 (3%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGE--ADSNDAYLEVHAGAGGTESQD 132
           LE+ D  I +   + + R+K E E    + ++LL+ +   D+ +  +E+ AG GG E+  
Sbjct: 65  LEDRDPEIRELAKEEISRLKDERERLDGELQNLLTPKDPNDNKNVLVEIRAGTGGEEASL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY R+AE   +KTE +        G K    ++ G  AY  LK E G+HR+ R
Sbjct: 125 FAHDLFRMYWRYAETMGWKTEIMSSSVTGSGGFKEVIFMVYGKGAYSHLKFESGIHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V    ++ +E+ I  S+ + D +R+SG GGQ VNTTDSAVR+
Sbjct: 185 VPETEAQGRIHTSAVTVAVLAEAEE-VELHIDPSEIKTDVFRSSGPGGQSVNTTDSAVRL 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310
           TH+PTGVVV CQ E+SQ KNK +A  +LRA+L +  +Q + E   I ++ K ++G G   
Sbjct: 244 THLPTGVVVICQDEKSQLKNKNKAMKVLRARLLDRMIQDQNE--KIAQNRKDQVGSGDRS 301

Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R  I       VL GDL + +
Sbjct: 302 GRIRTYNF-PQGRVTDHRAGITLYKLESVLQGDLSELV 338


>gi|46908715|ref|YP_015104.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093870|ref|ZP_00231612.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217963353|ref|YP_002349031.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|226225091|ref|YP_002759198.1| peptide chain release factor 1 [Listeria monocytogenes Clip81459]
 gi|254825334|ref|ZP_05230335.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|254828119|ref|ZP_05232806.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|254831034|ref|ZP_05235689.1| peptide chain release factor 1 [Listeria monocytogenes 10403S]
 gi|254853928|ref|ZP_05243276.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|254900318|ref|ZP_05260242.1| peptide chain release factor 1 [Listeria monocytogenes J0161]
 gi|254913443|ref|ZP_05263455.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|254932215|ref|ZP_05265574.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|254937824|ref|ZP_05269521.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|254993429|ref|ZP_05275619.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-064]
 gi|255026493|ref|ZP_05298479.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-003]
 gi|255519761|ref|ZP_05386998.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-175]
 gi|284802981|ref|YP_003414846.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284996122|ref|YP_003417890.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290892706|ref|ZP_06555698.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|300764957|ref|ZP_07074945.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|61214637|sp|Q71WN5|RF1_LISMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790886|sp|B8DBG6|RF1_LISMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585225|sp|C1KYW0|RF1_LISMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46881987|gb|AAT05281.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017744|gb|EAL08535.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217332623|gb|ACK38417.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|225877553|emb|CAS06267.1| Putative peptide chain release factor 1 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258600504|gb|EEW13829.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|258607316|gb|EEW19924.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|258610428|gb|EEW23036.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|284058543|gb|ADB69484.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284061589|gb|ADB72528.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290557766|gb|EFD91288.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|293583770|gb|EFF95802.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|293591450|gb|EFF99784.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|293594577|gb|EFG02338.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|300514257|gb|EFK41316.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|307572070|emb|CAR85249.1| peptide chain release factor 1 [Listeria monocytogenes L99]
 gi|332312973|gb|EGJ26068.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott
           A]
          Length = 358

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 191/351 (54%), Gaps = 20/351 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           ++D   AV+ R   LN    DP +  +    + L +E+  +   +   +E   + +++ +
Sbjct: 1   MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              LL   L+++   + +E    LQ+ K ++E +    LL    D ND     LE+   A
Sbjct: 61  TKELLGEKLDDEMREMAKEEFAELQKEKADLEERL--KLLLVPKDPNDDKNVILEIRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E 
Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSK 303
           T SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K
Sbjct: 238 TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RK 293

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +G G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 294 SAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|188995885|ref|YP_001930137.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
 gi|188595565|dbj|BAG34540.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
          Length = 352

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 141/242 (58%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  G GG E+  +A  L RMY ++ E + ++ E  ++ +G   G K     +
Sbjct: 102 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSV 161

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   YG LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++EI+ +D  + T
Sbjct: 162 KGEGVYGILKYESGVHRVQRVPATETQGRIHTSAATVAVLPEAEE-VDVEINPADIEMQT 220

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++ V++TH PTG+VV CQQ RSQ  N+  A  MLR+KLY++EL K 
Sbjct: 221 SRSGGAGGQNVNKVETKVQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKH 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            E   I    KT +  G    +IR+Y   P   V D R N+   + S V+DG++  F+ A
Sbjct: 281 NEA--IAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDA 337

Query: 350 TL 351
            +
Sbjct: 338 LI 339


>gi|325963840|ref|YP_004241746.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469927|gb|ADX73612.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 357

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/248 (39%), Positives = 145/248 (58%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  LEV  G GG E+  +A  LLRMYTR+AE R +KTE +   + +  G K   + +
Sbjct: 100 DARNVILEVKGGEGGDEAALFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAV 159

Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG         Y  LK E GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++
Sbjct: 160 KGNSNDPAEGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  Q+ +  A      K++I       +IR+Y   P   + D RT  +  +   V++GDL
Sbjct: 278 LAHQQEQIDAENSAQRKSQIRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDL 336

Query: 344 DDFMKATL 351
           +  +++ +
Sbjct: 337 EPVIQSAI 344


>gi|255533998|ref|YP_003094370.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
 gi|255346982|gb|ACU06308.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 144/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A  E+  G GG E+  +A  L RMY+R+ E++ +K E +++ +G   G K   L +
Sbjct: 106 DAKNAVFEIRGGTGGDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++ I++ I+ +D  + T
Sbjct: 166 SGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-IDLYINPADIDLQT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++ V++TH P+G+VV CQQERSQ  N+  A  MLR+KLY++ELQK+
Sbjct: 225 SRSGGAGGQNVNKVETKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKK 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +I    KT +  G    +IR+Y   P   V D R  +   + + ++DG + + + A
Sbjct: 285 N--GDIAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRIGLTLYNLNSIMDGGVQELIDA 341


>gi|221128345|ref|XP_002163029.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 400

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/272 (37%), Positives = 161/272 (59%), Gaps = 24/272 (8%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +QE     Q    ++E +  +S++  + D SN+A +E+ AG GG E+  +A  +L MY 
Sbjct: 111 FVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAAIFAAEMLSMYD 170

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           +++   ++K E L+  +  + G+K  ++ I G   +G LK E GVHR+ R+   +S  R 
Sbjct: 171 KYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQRVPITESLGRV 230

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  ++ V P   +SI++ ++  D ++DT+R+SGAGGQHVNTTDSAVR+THIP+G+VV 
Sbjct: 231 HTSTVTVAVLPQ-PESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRLTHIPSGLVVA 289

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESSKTEIGWGR---QIRSY 315
            Q +RSQ +NK++A  +L A+LY+ E    +Q+R E+       +T+IG G    +IR+Y
Sbjct: 290 VQSQRSQIENKSRALKILSAQLYDFERTRVVQERVEL------RRTQIGSGHRSERIRTY 343

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              P   + D R         + L G L DFM
Sbjct: 344 NF-PQDRITDHRIG-------ETLSG-LSDFM 366


>gi|158312864|ref|YP_001505372.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
 gi|238686837|sp|A8L3V1|RF1_FRASN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158108269|gb|ABW10466.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
          Length = 356

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 147/245 (60%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS DA LEV AGAGG ES  +A  LLRMY R+AE+R ++T+ L+ +  +  G +  ++ +
Sbjct: 100 DSRDAILEVKAGAGGEESALFAGDLLRMYLRYAERRGWRTQILDANPSDLGGYRDVSVAV 159

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +G L+ E GVHR+ R+   +S  R HTS + + V P   D ++IE+  
Sbjct: 160 KSRGTAAPGQGVFGRLRFEGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAAD-VDIEVDP 218

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID +R+SG GGQ VNTTDSAVRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L 
Sbjct: 219 NDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLL 278

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +K E  A    +S+   +    ++R+Y   P   + D R   +  +   VLDGDLD
Sbjct: 279 AAAREKAETAAAAARASQVRTVDRSEKVRTYNF-PENRISDHRIGYKAHNLEAVLDGDLD 337

Query: 345 DFMKA 349
             ++A
Sbjct: 338 AVIEA 342


>gi|295099339|emb|CBK88428.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           cylindroides T2-87]
          Length = 316

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 125/204 (61%), Gaps = 3/204 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS++A++E+   AGG E+  +A  L RMY ++AE + +K E  +  D E  G    T  +
Sbjct: 108 DSHNAFMEIRGAAGGDEANIFAGDLFRMYAKYAESKGWKVEVTDSEDSEAGGFSLITFKV 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NAYG LK E G HR+ R+   +S  R  TS +++  YP +D+  + +I  +D  I+ 
Sbjct: 168 TGQNAYGTLKFESGSHRVQRVPKTESQGRIQTSTATVLCYPELDEE-DFDIDMNDLEIEA 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVN TDSAVRI H PTG+VV+CQ  RSQH+N+A A   + A++ E   ++ 
Sbjct: 227 MRASGAGGQHVNKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALATIAARVKEEHQREL 286

Query: 293 EEIANIGESSKTEIGWGRQIRSYV 316
           +E A  G   +T+IG G +   +V
Sbjct: 287 DEKA--GAERRTKIGTGDRAERFV 308


>gi|218297203|ref|ZP_03497865.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
 gi|218242480|gb|EED09019.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
          Length = 176

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 110/164 (67%), Gaps = 1/164 (0%)

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +R SP+D++ RRHTSF+ + V P VDD++E+ I   D RID +R+ G GGQ VNTTDSAV
Sbjct: 1   MRPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAV 60

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V CQ  RSQ KNK  A  +LR++L+ELE +K++E           I WG 
Sbjct: 61  RIVHLPTGITVTCQTTRSQIKNKELALKVLRSRLFELEWKKKQEELQKLRGEVRPIEWGS 120

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYVL   Q VKD RT + +  P +VLDGDL DF+ A L  K
Sbjct: 121 QIRSYVLD-KQYVKDHRTGLMRFDPQNVLDGDLMDFIWAGLEWK 163


>gi|315092115|gb|EFT64091.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA4]
          Length = 379

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 153/270 (56%), Gaps = 24/270 (8%)

Query: 94  RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           R +L++   +   LL  S   D  DA +E+H+G GG ES  +A  LLRMY R+AE+  + 
Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160

Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
              L     +  G ++  + + G P   AYG+LK E GVHR+ R+   +S+ R HTS   
Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS
Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279

Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           Q +NKA+A  MLRAK+          E +  +R+++  +  S++        +R+Y    
Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNFSQ 331

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            ++  D R   +      +L GDL D + A
Sbjct: 332 NRLT-DHRIGYKSRKLDQILAGDLGDVLDA 360


>gi|332653076|ref|ZP_08418821.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
 gi|332518222|gb|EGJ47825.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
          Length = 354

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 145/243 (59%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A+ L RMY+ +AE   +KTE   + + E  G+K  +  I
Sbjct: 103 DDKNVIVEIRAGVGGEEAALFAHSLYRMYSMFAEANHWKTEVDSVSETELGGVKEISFTI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ R+   +S  R HTS  ++ V P ++ + +++I+ +D  +  
Sbjct: 163 EGDGAYSRLKFESGVHRVQRVPETESGGRVHTSTVTVAVLPEME-TADVQINPADIEMQV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T SAVR+ H PTG VV+CQQERSQ +N+ +A  +L ++LYE E +K 
Sbjct: 222 FRSSGAGGQHVNKTSSAVRLIHKPTGTVVECQQERSQFQNRDKAMRILASRLYEAEQEKI 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +      ++++G G    +IR+Y   P   V D R  +      ++++GDL++ + A
Sbjct: 282 S--SEYTAQRRSQVGSGMRNERIRTYNF-PQGRVTDHRIGLTLYKIDNIMNGDLNEVIDA 338

Query: 350 TLA 352
             A
Sbjct: 339 LAA 341


>gi|26553517|ref|NP_757451.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
 gi|32171558|sp|Q8EWY5|RF1_MYCPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26453523|dbj|BAC43855.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
          Length = 359

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/243 (38%), Positives = 143/243 (58%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG ES  +   L   Y R+A+   +K + LE+ +    G    + +I
Sbjct: 110 DDKNVIVEMRPAAGGDESSIFVGDLFSAYKRYADSLGWKVKMLEVQESSH-GYGFISFMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  +K E GVHR+ R+   +S  R HTS  ++ V P +++ +E+ I+ SD +IDT
Sbjct: 169 NGENVYSKMKFESGVHRVQRVPATESKGRVHTSTITVAVLPELEE-VELVINNSDLKIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQH+N T+SAVRITHIPTG+ V CQ+ +SQ +N+  A  MLRAKL+  E ++ 
Sbjct: 228 YRASGAGGQHINKTESAVRITHIPTGIFVACQEGKSQIENRETAMKMLRAKLW--EKKEE 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E   NI +  K ++G G    +IR+Y   P   V D R N+      +V+ G+L + + +
Sbjct: 286 ENRKNISDLRKGQVGTGERAEKIRTYNY-PQNRVTDHRINLTLNKLDNVMLGNLSEIIDS 344

Query: 350 TLA 352
            ++
Sbjct: 345 LIS 347


>gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199508|gb|EGD56689.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 364

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 145/249 (58%), Gaps = 7/249 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS+D  LEV +GAGG ES  +A+ L+RMY ++ E+  +K   L   + +  G K ATL I
Sbjct: 111 DSDDVVLEVKSGAGGEESALFASDLVRMYLKYCERHGWKATVLGATESDLGGYKEATLSI 170

Query: 173 KG-----PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           K         +  LK E GVHR+ R+   +S  R HTS + + +YP  D+  EI+I ESD
Sbjct: 171 KARETVRDGVWSRLKFEGGVHRVQRVPVTESQGRIHTSAAGVLIYPEPDEVEEIQIDESD 230

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITH+PT +VV CQ ERSQ +NKA+A  +L A+L   
Sbjct: 231 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLKAA 290

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++ E  A+ G  ++   +    +IR+Y   P   + D R   +  +   VL G++D  
Sbjct: 291 AEEEAEAEASAGRQAQIRTVDRSERIRTYNF-PENRITDHRIGYKANNLDSVLGGEMDAL 349

Query: 347 MKATLAIKK 355
           + A +   K
Sbjct: 350 LDALVEADK 358


>gi|171057271|ref|YP_001789620.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
 gi|238689096|sp|B1XYX1|RF1_LEPCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170774716|gb|ACB32855.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
          Length = 360

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 180/341 (52%), Gaps = 25/341 (7%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---------LCDNLIL 72
           RL+ ++    DP +   +   + L RE   +   +   +  + R         L D   +
Sbjct: 15  RLAEIDAALADPKVCSQIGTLRSLNREHARVSALVDRWQRYEQREQDLAGAQELLDEPEM 74

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQ 131
            ELA  E     +     +L R+  E+      +L+  +AD + +A++E+ AG GG ES 
Sbjct: 75  AELARAE-----IGAAQADLDRLDSEL----LTALMPRDADDDRNAFVEIRAGTGGEESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R AE+R +KTE +     +  G K   L I G   +  LK E G HR+ 
Sbjct: 126 LFAADLARMYLRHAERRGWKTELMSESVSDLGGYKDVVLHIIGDAVFEALKYESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V    D++ E+ ++ ++ RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAVLAEADEAEEVSLNPAELRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+V +CQ +RSQH+NKA+A  +        +  ++E+ A    + K+ IG G  
Sbjct: 246 VTHLPTGLVAECQDDRSQHRNKARALAV--LAARLRDRVRQEQAAKDAAARKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   + D R N+       VL+GDLD+ + A
Sbjct: 304 SDRIRTYNF-PQGRLTDHRINLTLYKLGAVLEGDLDEVIGA 343


>gi|238855957|ref|ZP_04646243.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|260664674|ref|ZP_05865526.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|282934364|ref|ZP_06339631.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|313471876|ref|ZP_07812368.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|238831430|gb|EEQ23781.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|239529209|gb|EEQ68210.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|260561739|gb|EEX27711.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|281301574|gb|EFA93851.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
          Length = 362

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 165/298 (55%), Gaps = 12/298 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDA 117
           +E Q  + DN  ++E   + D   + +E + +L++    LE E K    L     D  D 
Sbjct: 55  QEDQKTISDNKEIIESESDADLVEMAKEENSDLEKEVADLEEEIKIL-MLPKDPNDDKDI 113

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +E+   AGG E+  +A  LLRMY ++AE + +K   ++    E  G K   ++I G   
Sbjct: 114 IMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKV 173

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I++   D R+D YR+SG
Sbjct: 174 YSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDVYRSSG 232

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIA 296
           AGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+  E Q +   A
Sbjct: 233 AGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQ---A 289

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  E  K  +G G    +IR+Y   P   V D R  +       +++G+LD+ + A +
Sbjct: 290 SYDEKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346


>gi|328947853|ref|YP_004365190.1| peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
 gi|328448177|gb|AEB13893.1| Peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
          Length = 361

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 139/240 (57%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ + AGG E+  +   L  MY   AE++ +KTE +E  + E  G       I
Sbjct: 108 DEKNIILEIRSAAGGDEASLFVRDLWEMYMHLAERKGWKTETMEAQETEVGGFNKIVTSI 167

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG L+ E GVHR+ R+   +S  R  TS  ++ V P  +++ EI+I   D R+D 
Sbjct: 168 AGKFVYGTLRWESGVHRVQRVPATESQGRLQTSTVTVAVLPEAEET-EIQIRPEDVRVDV 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA G GGQ VNTTDSAVR+THIPTG+VV  Q E+SQHKNK +A+ +LRA+L++LE  KR
Sbjct: 227 MRAGGPGGQCVNTTDSAVRLTHIPTGIVVIQQDEKSQHKNKDKAFRVLRARLFDLEESKR 286

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  +   ++ K  +G G    +IR+Y   P   V D R N+   +    + G++D+ + A
Sbjct: 287 Q--SERADARKNMVGSGARSEKIRTYNF-PQDRVTDHRINLSLHNLPSFMMGNMDEMLDA 343


>gi|13508100|ref|NP_110049.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
 gi|2500138|sp|P75420|RF1_MYCPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1674166|gb|AAB96123.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
          Length = 359

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 176/321 (54%), Gaps = 14/321 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ-ETSDNLQRIKLEV-E 100
           K + +E +H    +   KE + RL D  +  E  LE ++   L  E    L+R++  V E
Sbjct: 36  KAINKELKHKQPLVVKFKEFK-RLIDQALEAEAILENNELKELHDEAKKELERVRSVVPE 94

Query: 101 YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           Y++   LL    D N+     +E+   AGG ES  +   L  MY  +   + +K +  E+
Sbjct: 95  YEEALKLLLLPIDENNQKNVIVELRPAAGGDESCIFLADLFNMYRNFCSNKGWKLQINEM 154

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
                 G+   +  + G + +  LK E GVHR+ R+   +S  R HTS  ++ V P ++ 
Sbjct: 155 IPSS-VGLNFVSFEVNGVDVFAKLKFESGVHRVQRVPATESKGRVHTSTVTVAVLPQLE- 212

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           ++E+ I+ +D R+DTYRASGAGGQHVN T+SAVRITH+PTG+VV CQ+ +SQ  N+  A 
Sbjct: 213 AVEVHINPADLRVDTYRASGAGGQHVNRTESAVRITHLPTGIVVSCQEGKSQFTNRDTAM 272

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334
            MLRAKL+  E  + E+++      K+++G G    +IR+Y   P   V D R  +    
Sbjct: 273 KMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDRAEKIRTYNY-PQNRVTDHRIKLTVNK 329

Query: 335 PSDVLDGDLDDFMKATLAIKK 355
            + ++ GDLD+ ++A  A +K
Sbjct: 330 LNTIILGDLDEIIEALQADEK 350


>gi|270308380|ref|YP_003330438.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
 gi|270154272|gb|ACZ62110.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
          Length = 355

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 187/345 (54%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
            +N  +R   +  +   P +  +    + L +ER  L   +      K +   L +   L
Sbjct: 5   LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAMSKELEEAKNL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTES 130
           LE+  +ED   +++   +NL++    + Y+Q   E L     D     +E+ AG GG E+
Sbjct: 65  LEIEKDEDMRDMVRGEIENLEKSMANL-YEQMTLELLPKDPNDDKSIIMEIRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MYTR+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+
Sbjct: 124 GLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P  ++ ++I+I+  D R+D + +SGAGGQ+V    +A+
Sbjct: 184 QRVPQTEASGRIHTSTATVAVLPQAEE-VDIDINMDDVRVDIFHSSGAGGQNVQKVATAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E     ES + ++G   
Sbjct: 243 RLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDE--ERTESRRAQVGQAD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R  +   +   +L+G LD+ +  TLA
Sbjct: 301 RSEKIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIID-TLA 343


>gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN]
 gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
 gi|13432207|sp|P45833|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790892|sp|B8ZR31|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae]
 gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
          Length = 361

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 139/253 (54%), Gaps = 15/253 (5%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           +D  LEV +G GG ES  +A  L RMY R+AE+  +    L+    +  G K ATL I  
Sbjct: 105 DDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISH 164

Query: 175 PNA---------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
             A         +  +K E GVHR+ R+   +S  R HTS + + VYP  ++  E+ I E
Sbjct: 165 KGASDGDAVDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDE 224

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ ERSQ +NK +A  +L A+L 
Sbjct: 225 SDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQ 284

Query: 286 ELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              + + + +AN      ++I       +IR+Y   P   + D R   +  +   VLDGD
Sbjct: 285 --AMAEEQALANASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGD 341

Query: 343 LDDFMKATLAIKK 355
           LD    A  A  K
Sbjct: 342 LDALFDALSAADK 354


>gi|119484803|ref|ZP_01619285.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
 gi|119457621|gb|EAW38745.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
          Length = 368

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 191/343 (55%), Gaps = 21/343 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELAL 77
           Q  + L  +  DP +  N  E + + +ER  ++   N     K  Q+ L     + + A 
Sbjct: 15  QTFNELTLRLADPDVSNNPTELQRIAKERSSIEEVVNTYQLWKTAQEELTGARQVQKEAG 74

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTESQ 131
           E+ +   ++E +  L+  +L+ + +Q E+      L S   D  +  LE+ AG GG E+ 
Sbjct: 75  EDPE---MKEMA-ALEVEELQNQLEQLETHLKVLLLPSDPNDDKNIMLEIRAGTGGDEAS 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L+RMY+R+AE +K++ + +     +  G K A L IKG   Y  LK E GVHR+ 
Sbjct: 131 IWAGDLVRMYSRYAEGQKWQVKIVSESSADMGGFKEAILEIKGDQVYSKLKFEAGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P VD+ +++EI   D  + T R+ GAGGQ+VN  ++AV 
Sbjct: 191 RVPLTEAGGRVHTSTATVAVMPEVDE-VDVEIDPKDIEMSTARSGGAGGQNVNKVETAVD 249

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E   +    ++++G G  
Sbjct: 250 LIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEA--VTSMRRSQVGTGAR 307

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y  +  + V D R   +  S S VL+G +DD + A +
Sbjct: 308 SEKIRTYNYKDNR-VTDHRLG-QNFSLSPVLEGGMDDVVDACV 348


>gi|326436517|gb|EGD82087.1| peptide chain release factor 2 [Salpingoeca sp. ATCC 50818]
          Length = 449

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/250 (39%), Positives = 147/250 (58%), Gaps = 14/250 (5%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH----DGEEAGIK 166
           +AD   A +E+ AG GGTE+  +A  L ++Y   A +R ++ + +        G + G+K
Sbjct: 180 DADDGSAIVEIRAGTGGTEAAIFAKDLYKLYQHLAVRRGWRVQEMTTSYTEGVGSDDGLK 239

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             T  + G +A+G LK E GVHR+ R+   ++  R HTS +++ V P   + + + I E 
Sbjct: 240 EVTFSVNGQDAFGSLKFESGVHRVQRVPITEAAGRIHTSTATVAVLPQASE-VTVSIHER 298

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D ++DTYR+ GAGGQHVNTTDSAVR+THIPTG+VV  Q ERSQH+N+  A  M+RA++Y+
Sbjct: 299 DIKMDTYRSGGAGGQHVNTTDSAVRLTHIPTGIVVAVQSERSQHRNRDVAMKMIRARVYQ 358

Query: 287 LELQKREEIANIGESSKTEIGW-----GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            E +K +      E  +  IG        +IR+Y   P   V D R N+ + S S VL+ 
Sbjct: 359 QEREKAQ--LERAEQRRALIGGTPGSRSDRIRTYNF-PQDRVTDHRVNV-RASLSSVLED 414

Query: 342 DLDDFMKATL 351
           D  D + ++L
Sbjct: 415 DGLDGIISSL 424


>gi|301633339|gb|ADK86893.1| peptide chain release factor 1 [Mycoplasma pneumoniae FH]
          Length = 359

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 176/321 (54%), Gaps = 14/321 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ-ETSDNLQRIKLEV-E 100
           K + +E +H    +   KE + RL D  +  E  LE ++   L  E    L+R++  V E
Sbjct: 36  KAINKELKHKQPLVVKFKEFK-RLIDQALEAEAILENNELKELHDEAKKELERVRSVVPE 94

Query: 101 YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
           Y++   LL    D N+     +E+   AGG ES  +   L  MY  +   + +K +  E+
Sbjct: 95  YEEALKLLLLPIDENNQKNVIVELRPAAGGDESCIFLADLFNMYRNFCTNKGWKLQINEM 154

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
                 G+   +  + G + +  LK E GVHR+ R+   +S  R HTS  ++ V P ++ 
Sbjct: 155 IPSS-VGLNFVSFEVNGVDVFAKLKFESGVHRVQRVPATESKGRVHTSTVTVAVLPQLE- 212

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           ++E+ I+ +D R+DTYRASGAGGQHVN T+SAVRITH+PTG+VV CQ+ +SQ  N+  A 
Sbjct: 213 AVEVHINPADLRVDTYRASGAGGQHVNRTESAVRITHLPTGIVVSCQEGKSQFTNRDTAM 272

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334
            MLRAKL+  E  + E+++      K+++G G    +IR+Y   P   V D R  +    
Sbjct: 273 KMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDRAEKIRTYNY-PQNRVTDHRIKLTVNK 329

Query: 335 PSDVLDGDLDDFMKATLAIKK 355
            + ++ GDLD+ ++A  A +K
Sbjct: 330 LNTIILGDLDEIIEALQADEK 350


>gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae]
          Length = 357

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 139/253 (54%), Gaps = 15/253 (5%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           +D  LEV +G GG ES  +A  L RMY R+AE+  +    L+    +  G K ATL I  
Sbjct: 101 DDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISH 160

Query: 175 PNA---------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
             A         +  +K E GVHR+ R+   +S  R HTS + + VYP  ++  E+ I E
Sbjct: 161 KGASDGDAVDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDE 220

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ ERSQ +NK +A  +L A+L 
Sbjct: 221 SDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQ 280

Query: 286 ELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              + + + +AN      ++I       +IR+Y   P   + D R   +  +   VLDGD
Sbjct: 281 --AMAEEQALANASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGD 337

Query: 343 LDDFMKATLAIKK 355
           LD    A  A  K
Sbjct: 338 LDALFDALSAADK 350


>gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [Mycobacterium kansasii ATCC 12478]
          Length = 357

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 140/235 (59%), Gaps = 7/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D  LEV +G GG ES  +A  L RMY R+AE+R +    L+    +  G K ATL I
Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERRGWTVTVLDETTSDLGGYKDATLAI 162

Query: 173 --KGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             KG +  G W  +K E GVHR+ R+   +S  R HTS + + VYP  ++  E++I ESD
Sbjct: 163 ASKGDSVDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +
Sbjct: 223 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQSM 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             ++    A+   +S+   +    +IR+Y   P   + D R   +  +   VLDG
Sbjct: 283 AEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKAYNLDQVLDG 336


>gi|332829242|gb|EGK01896.1| peptide chain release factor 1 [Dysgonomonas gadei ATCC BAA-286]
          Length = 361

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 139/238 (58%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A +E+  G GG E+  +A  L RMY ++ E + ++TE   + +G   G K     +
Sbjct: 111 DSKNAIVEIRGGTGGDEAAIFAGDLYRMYIKYCELKGWRTEITSLTEGTSGGYKEVIFTV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++EI+ +D  + T
Sbjct: 171 TGEGVYGILKYESGVHRVQRVPATETQGRVHTSAATVAVLPEAEE-VDVEINPADIEMQT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SGAGGQ+VN  ++ V++TH P+G+VV CQQ RSQ  N+  A  MLR KLY++EL K 
Sbjct: 230 ARSSGAGGQNVNKVETKVQLTHKPSGLVVVCQQARSQLANRELAMQMLRTKLYDIELSKY 289

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +  A I    KT +  G    +IR+Y   P   V D R N+   + S V+DG++   +
Sbjct: 290 Q--AEIASKRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINLTLYNLSGVMDGEIQPII 344


>gi|300770142|ref|ZP_07080021.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762618|gb|EFK59435.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 364

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+  G GG E+  +A  L RMYTR+ E + ++ E +++ +G   G K   L +
Sbjct: 113 DAKNAIIEIRGGTGGDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKV 172

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +S+ V P  +D +++E++  D  + T
Sbjct: 173 IGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAED-VDVELNPGDIEMQT 231

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++ V++TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+
Sbjct: 232 SRSGGAGGQNVNKVETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK 291

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +I    KT +  G    ++R+Y   P   V + R  +   +   V+DGD+   + A
Sbjct: 292 H--GDIAAKRKTMVSTGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDA 348


>gi|149409336|ref|XP_001510216.1| PREDICTED: similar to low density lipoprotein receptor-related
           protein 10 [Ornithorhynchus anatinus]
          Length = 380

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 130/215 (60%), Gaps = 6/215 (2%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
           F  + S EAD ND  LE+ AG GG E+  +   +  MY ++A  +K+  E LE    E  
Sbjct: 116 FLLIPSEEADENDLILELTAGIGGQEAMLFTAEMFDMYEQYAAYKKWHFETLEYFPSEIG 175

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ AT  I G  AY  LK E GVHR+ R+   +   R HTS  ++ V P   + I + I
Sbjct: 176 GLRHATASIGGHEAYKHLKFEGGVHRVQRVPKTERQGRTHTSTMTVAVLPQPTE-INLVI 234

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
              D RI+T RASGAGGQHVNTTDSAVRI H+PTG+  +CQQERSQ KN+  A   LRAK
Sbjct: 235 HPKDLRIETKRASGAGGQHVNTTDSAVRIVHVPTGIASECQQERSQLKNREMAMKKLRAK 294

Query: 284 LYELELQKREEIANIGESSKTEIGW-GR--QIRSY 315
           LY ++L+  EE +    + K +IG  GR  +IR+Y
Sbjct: 295 LYSIQLE--EETSKRYSARKIQIGTKGRSEKIRTY 327


>gi|91201018|emb|CAJ74075.1| strongly similar to class I peptide chain release factor
           [Candidatus Kuenenia stuttgartiensis]
          Length = 360

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/233 (39%), Positives = 146/233 (62%), Gaps = 7/233 (3%)

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG GG E+  +A  L RMY ++AE + +KTE  + ++ +  G K  T  I+G N Y 
Sbjct: 115 EIRAGTGGEEAAIFAADLFRMYIKYAESQNWKTELFDYNETDLGGFKEVTFSIEGRNVYQ 174

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E G HR+ R+   +++ R HTS +++ + P V++ +EI+I+ +D  I+T+RASG G
Sbjct: 175 KLRFESGTHRVQRVPQTEASGRVHTSTATVAILPEVEE-VEIDINPADILIETFRASGPG 233

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VN T SAVRITHI TG+VV+C  E+SQHKNKA+A  +LR++L+E  ++++ ++    
Sbjct: 234 GQKVNKTSSAVRITHISTGIVVKCLDEKSQHKNKAKAMRILRSRLHE-SIEEKNQLER-D 291

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  + +IG G    +IR+Y     + V D R N    +   V+ G LD+ + A
Sbjct: 292 QVRRIQIGTGDRSEKIRTYNYSQNR-VTDHRINFSVYNLEHVMLGYLDEIIAA 343


>gi|159475365|ref|XP_001695789.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158275349|gb|EDP01126.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 383

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 150/244 (61%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AGAGG E+  WA  L+RMY R+A K+ +K   +     E  G K   L I
Sbjct: 130 DDRNIMLEIRAGAGGDEASIWAGDLMRMYQRYANKQGWKASLVSCTQAEAGGYKEIILQI 189

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E GVHR+ R+   ++  R HTS +++ V P V++ +++ ++ +D  +  
Sbjct: 190 NGDSVYSKLKWEAGVHRVQRVPATEAAGRVHTSTATVAVMPEVEE-VDVALNMNDIDLKF 248

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQ+VN  ++AV + H PTG+ V CQ+ER+Q +NK +A+ +LRAKLYELELQ++
Sbjct: 249 ARASGAGGQNVNKVETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYELELQRQ 308

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP----SDVLDGDLDDFMK 348
           +  A I  + K+++G G   RS  ++ Y   KD R +  +       + +++GDL+D ++
Sbjct: 309 Q--AEIYAARKSQVGTGD--RSEKIKTYNY-KDSRVSDHRIKMNFDLNSIIEGDLEDTLQ 363

Query: 349 ATLA 352
           A ++
Sbjct: 364 AMIS 367


>gi|116671165|ref|YP_832098.1| peptide chain release factor 1 [Arthrobacter sp. FB24]
 gi|166223528|sp|A0JY78|RF1_ARTS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116611274|gb|ABK03998.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter sp.
           FB24]
          Length = 357

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/248 (39%), Positives = 145/248 (58%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  LEV  G GG E+  +A  LLRMY+R+AE R +KTE +   + +  G K   + +
Sbjct: 100 DARNVILEVKGGEGGDEAALFAADLLRMYSRYAESRGWKTELISATESDLGGYKDVQMAV 159

Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG         Y  LK E GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++
Sbjct: 160 KGNSNDPAEGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  Q+ +  A      K++I       +IR+Y   P   + D RT  +  +   V++GDL
Sbjct: 278 LAHQQEQIDAENSAQRKSQIRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDL 336

Query: 344 DDFMKATL 351
           +  +++ +
Sbjct: 337 EPVIQSAI 344


>gi|257421856|ref|ZP_05598846.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|257163680|gb|EEU93640.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|315155439|gb|EFT99455.1| peptide chain release factor 1 [Enterococcus faecalis TX0043]
          Length = 357

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY ++AE + +K E LE +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EIE+++ D R+D 
Sbjct: 166 SGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIELADKDIRVDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+ ++Q+ 
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341


>gi|138896954|ref|YP_001127407.1| peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249772|ref|ZP_03148468.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
 gi|166223561|sp|A4ITK8|RF1_GEOTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134268467|gb|ABO68662.1| Peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210648|gb|EDY05411.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
          Length = 358

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 143/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ A AGG E+  +A  L RMYTR+AE + +KTE +E       G K    ++
Sbjct: 106 DEKNVIMEIRAAAGGEEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS +++   P +++ +E+EI E D R+DT
Sbjct: 166 NGKGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVACLPEMEE-VEVEIHEKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y +SG GGQ VNTT SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+   Q  
Sbjct: 225 YASSGPGGQSVNTTMSAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ-- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A   ++ K  +G G    +IR+Y   P   V D R  +       VLDG LD+ ++A
Sbjct: 283 EARAEYDQTRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDLVLDGQLDEIIEA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|257870909|ref|ZP_05650562.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
 gi|257805073|gb|EEV33895.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
          Length = 357

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 170/302 (56%), Gaps = 19/302 (6%)

Query: 56  ISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEA 112
           +  IK+ ++ L +NL   + E+A EE   S L++  D L+ RIK+ +       L     
Sbjct: 55  VEGIKDTEELLGENLDAEMAEMAKEE--LSDLKKEKDVLEDRIKILL-------LPKDPN 105

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY ++AE + +K E ++ +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAETQGWKVEVMDANVTGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I++ D R D 
Sbjct: 166 SGENVYSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIADKDIRTDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+ ++Q+ 
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EARSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|229545076|ref|ZP_04433801.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|307287617|ref|ZP_07567660.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|229309968|gb|EEN75955.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|306501355|gb|EFM70658.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|315165014|gb|EFU09031.1| peptide chain release factor 1 [Enterococcus faecalis TX1302]
          Length = 357

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY ++AE + +K E LE +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKVEVLEANVTGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EIE+++ D R+D 
Sbjct: 166 SGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIELADKDIRVDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+ ++Q+ 
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341


>gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
          Length = 353

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 139/238 (58%), Gaps = 7/238 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  +   + RMY+R+AE   ++ E L   D    G K     +
Sbjct: 105 DEKNIILEIRAGTGGEEAALFVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFKEIIASV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS  ++ + P  ++ ++++I  +D R+D 
Sbjct: 165 SGTNVYSKLKYESGAHRVQRVPATESQGRIHTSAITVAILPEAEE-VDVKIDPNDIRVDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSA+RITH+ TG+VV CQ E+SQHKNKA+A  +LR++L  L+  + 
Sbjct: 224 FRSSGPGGQSVNTTDSAIRITHLATGLVVICQDEKSQHKNKAKALKVLRSRL--LQAAQD 281

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E      ++ K+++G G    +IR+Y   P   V D R N+   +    ++G +DD +
Sbjct: 282 ETKKAYDDNRKSQVGSGDRSERIRTYNY-PQGRVTDHRINLTLYNLDQAMEGHIDDII 338


>gi|310644400|ref|YP_003949159.1| peptide chain release factor 1 [Paenibacillus polymyxa SC2]
 gi|309249351|gb|ADO58918.1| Peptide chain release factor 1 [Paenibacillus polymyxa SC2]
          Length = 355

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 143/240 (59%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L RMYTR+A+ + ++ E ++ +  +  G K    +I
Sbjct: 106 DDKNVIIEIRGAAGGDEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ RI   +S  R HTS S++ V P  ++ ++IEI + D R+DT
Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVSVMPEAEE-VDIEILDKDIRVDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+TH+PTG+V  CQ  +SQ+ NK +A  +LRA++   ++ ++
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHMPTGIVATCQDGKSQNSNKEKALQVLRARIS--DMMRQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A      K+++G G    +IR+Y   P   V D R  +       V++G++++ + A
Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSA 341


>gi|220906439|ref|YP_002481750.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
 gi|254790876|sp|B8HXV0|RF1_CYAP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219863050|gb|ACL43389.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
          Length = 364

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 188/336 (55%), Gaps = 35/336 (10%)

Query: 32  DPHLWQNVIEAKMLMRE-----------RQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           DP  +Q V +A+  + E           +QHL  A    ++I      +  L E+A++E 
Sbjct: 32  DPEEFQRVAKARASLEETVDTYDTWKTVQQHLAEA----RQIAREAASDPELQEMAVQE- 86

Query: 81  DCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
             + L E S +L QR+K+ +       L     D  +  LE+ AG GG E+  WA  L+R
Sbjct: 87  -VNELTEKSAHLEQRLKILL-------LPRDPNDDKNIMLEIRAGTGGDEASIWAGDLVR 138

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           +Y+R+AE ++++ + +    GE  G K A L I+G   Y  LK E GVHR+ R+   +++
Sbjct: 139 LYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKLKYEAGVHRVQRVPATEAS 198

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P VD+ +E++I   D  + T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 199 GRVHTSTATVAIMPEVDE-VEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGI 257

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ERSQ +NK +A  +LRAKLYE++LQ  E+ + I    ++++G G    +IR+Y 
Sbjct: 258 RIFCTEERSQLQNKERAMQILRAKLYEMKLQ--EQQSEITSRRRSQVGTGSRSEKIRTY- 314

Query: 317 LQPYQMVKDLRTNIEKTSP-SDVLDGDLDDFMKATL 351
              Y+  +     + +  P + VL+GD++  ++A +
Sbjct: 315 --NYKDNRATDHRLGQNFPLNQVLEGDIEGIIQACI 348


>gi|29377042|ref|NP_816196.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227519760|ref|ZP_03949809.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227554052|ref|ZP_03984099.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229549320|ref|ZP_04438045.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255972029|ref|ZP_05422615.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255975086|ref|ZP_05425672.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256616929|ref|ZP_05473775.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256763197|ref|ZP_05503777.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256853870|ref|ZP_05559235.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256957798|ref|ZP_05561969.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256961203|ref|ZP_05565374.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256963678|ref|ZP_05567849.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|257079736|ref|ZP_05574097.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|257081918|ref|ZP_05576279.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|257084460|ref|ZP_05578821.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|257087541|ref|ZP_05581902.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|257090700|ref|ZP_05585061.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257416748|ref|ZP_05593742.1| peptide chain release factor 1 [Enterococcus faecalis AR01/DG]
 gi|257419965|ref|ZP_05596959.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|293384152|ref|ZP_06630046.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|293386966|ref|ZP_06631535.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294779688|ref|ZP_06745078.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|300861212|ref|ZP_07107299.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|307270729|ref|ZP_07552020.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|307271624|ref|ZP_07552895.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|307276806|ref|ZP_07557917.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|307285597|ref|ZP_07565736.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|307290429|ref|ZP_07570344.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|312899933|ref|ZP_07759251.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|312905241|ref|ZP_07764361.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|312907897|ref|ZP_07766880.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|312953588|ref|ZP_07772425.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|312978574|ref|ZP_07790312.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|46576782|sp|Q831F6|RF1_ENTFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29344508|gb|AAO82266.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227072848|gb|EEI10811.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227176800|gb|EEI57772.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229305557|gb|EEN71553.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255963047|gb|EET95523.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255967958|gb|EET98580.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256596456|gb|EEU15632.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256684448|gb|EEU24143.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256710813|gb|EEU25856.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256948294|gb|EEU64926.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256951699|gb|EEU68331.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256954174|gb|EEU70806.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|256987766|gb|EEU75068.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|256989948|gb|EEU77250.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|256992490|gb|EEU79792.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|256995571|gb|EEU82873.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|256999512|gb|EEU86032.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257158576|gb|EEU88536.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG]
 gi|257161793|gb|EEU91753.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|291078632|gb|EFE15996.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|291083636|gb|EFE20599.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294453242|gb|EFG21654.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|295113546|emb|CBL32183.1| bacterial peptide chain release factor 1 (bRF-1) [Enterococcus sp.
           7L76]
 gi|300850251|gb|EFK78001.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|306498622|gb|EFM68124.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|306502821|gb|EFM72086.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|306506443|gb|EFM75602.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|306511502|gb|EFM80501.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|306513039|gb|EFM81680.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|310625988|gb|EFQ09271.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|310628426|gb|EFQ11709.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|310631478|gb|EFQ14761.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|311288723|gb|EFQ67279.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|311292929|gb|EFQ71485.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|315025302|gb|EFT37234.1| peptide chain release factor 1 [Enterococcus faecalis TX2137]
 gi|315030387|gb|EFT42319.1| peptide chain release factor 1 [Enterococcus faecalis TX4000]
 gi|315032691|gb|EFT44623.1| peptide chain release factor 1 [Enterococcus faecalis TX0017]
 gi|315035852|gb|EFT47784.1| peptide chain release factor 1 [Enterococcus faecalis TX0027]
 gi|315143714|gb|EFT87730.1| peptide chain release factor 1 [Enterococcus faecalis TX2141]
 gi|315148532|gb|EFT92548.1| peptide chain release factor 1 [Enterococcus faecalis TX4244]
 gi|315150059|gb|EFT94075.1| peptide chain release factor 1 [Enterococcus faecalis TX0012]
 gi|315151855|gb|EFT95871.1| peptide chain release factor 1 [Enterococcus faecalis TX0031]
 gi|315159264|gb|EFU03281.1| peptide chain release factor 1 [Enterococcus faecalis TX0312]
 gi|315161810|gb|EFU05827.1| peptide chain release factor 1 [Enterococcus faecalis TX0645]
 gi|315168548|gb|EFU12565.1| peptide chain release factor 1 [Enterococcus faecalis TX1341]
 gi|315170191|gb|EFU14208.1| peptide chain release factor 1 [Enterococcus faecalis TX1342]
 gi|315172490|gb|EFU16507.1| peptide chain release factor 1 [Enterococcus faecalis TX1346]
 gi|315574712|gb|EFU86903.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B]
 gi|315579264|gb|EFU91455.1| peptide chain release factor 1 [Enterococcus faecalis TX0630]
 gi|315580976|gb|EFU93167.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A]
 gi|323481494|gb|ADX80933.1| peptide chain release factor 1 [Enterococcus faecalis 62]
 gi|327535788|gb|AEA94622.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF]
 gi|329578086|gb|EGG59499.1| peptide chain release factor 1 [Enterococcus faecalis TX1467]
          Length = 357

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY ++AE + +K E LE +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EIE+++ D R+D 
Sbjct: 166 SGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIELADKDIRVDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+ ++Q+ 
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341


>gi|86132255|ref|ZP_01050850.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
 gi|85817174|gb|EAQ38357.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
          Length = 359

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 142/238 (59%), Gaps = 4/238 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171
           D+ +  +E+ AG GG E+  +A  L RMYT++ +    +K   ++  +G   G K     
Sbjct: 106 DAKNVVVEIRAGTGGDEASIFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFE 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G + YG +K E GVHR+ R+   ++  R HTS +++ V P  ++  +++I   D R+D
Sbjct: 166 ITGQDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVQIEPKDVRVD 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K
Sbjct: 225 FFCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAK 284

Query: 292 REEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           ++E      +S+   G    +IR+Y   P   V D R  +      ++++GD+   ++
Sbjct: 285 KQEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKILE 341


>gi|332663960|ref|YP_004446748.1| peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332774|gb|AEE49875.1| Peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 137/240 (57%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS D   E+ +G GG E+  +A  L RMYTR+ E + +K  A+EI++G   G     L I
Sbjct: 105 DSRDVIFEIRSGTGGDEASLFAGDLYRMYTRYFESKGWKVSAMEINEGSVGGYNKLVLEI 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E G HR+ R+   +S  R HTS +++ V P ++   ++EI + D + DT
Sbjct: 165 NGEDVYGTLKFESGAHRVQRVPKTESQGRVHTSAATVVVMPKLEME-DLEIRKEDLKTDT 223

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SGAGGQHVN T+S VR TH+PTGVV +    RSQ +N+  A   L  K+YE+  Q  
Sbjct: 224 FRSSGAGGQHVNKTESGVRFTHLPTGVVSESTDGRSQIQNREIALQRLYQKIYEMRRQAH 283

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +      K+ +G G    +IR+Y   P   V D R N+   S   VL+GDL+  ++ 
Sbjct: 284 E--SEQAAKRKSLVGSGDRSDKIRTYNF-PQNRVTDHRINLTIYSLDKVLEGDLEAIIEG 340


>gi|13357561|ref|NP_077833.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762199|ref|YP_001752083.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920085|ref|ZP_02690833.2| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508605|ref|ZP_02689678.2| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701604|ref|ZP_02553446.2| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|13124459|sp|Q9PRE0|RF1_UREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039997|sp|B1AHY9|RF1_UREP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|11277784|pir||D82945 translation releasing factor RF-1 UU003 [imported] - Ureaplasma
           urealyticum
 gi|6898949|gb|AAF30410.1|AE002100_3 peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|168827776|gb|ACA33038.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902439|gb|EDT48728.1| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182676062|gb|EDT87967.1| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700834|gb|EDU19116.1| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 359

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 169/316 (53%), Gaps = 22/316 (6%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVE 100
           A+   + +Q LD  I+  K +      +L L+ELA ++ D+  I     +N  +I L   
Sbjct: 49  AEAFAKYKQKLDTGIAAEKILNTE--KDLELIELAQMDLDEAKINIPIIENDLKIML--- 103

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
                 L +   D  +  +E+   AGG ES  +   L   Y  +AE   +K + +E+   
Sbjct: 104 ------LPTDPNDDKNVIVEMRPAAGGDESSIFVGNLFDTYRAYAENNNWKMKIIEMTPN 157

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
              G    + +I G   Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D ++
Sbjct: 158 A-VGFSFISFMISGEEVYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLPE-QDEVD 215

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I+ ++ RIDTYRASGAGGQHVN T+SAVRITHIPTGVV  CQ+ +SQ +N+  A  ML
Sbjct: 216 VVINPTELRIDTYRASGAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKML 275

Query: 281 RAKLYE-LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           RAKL+E  + Q+  E AN+    K ++G G    +IR+Y   P   V D R N+      
Sbjct: 276 RAKLWEAAQEQQNAEFANL---RKNQVGTGDRSEKIRTYNY-PQNRVTDHRINLTLNKLD 331

Query: 337 DVLDGDLDDFMKATLA 352
            ++ G+LD+ + A +A
Sbjct: 332 QIMMGELDEIIDALIA 347


>gi|325956455|ref|YP_004291867.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
 gi|325333020|gb|ADZ06928.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
          Length = 362

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 15/283 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+E+A EE+   I +E  +   +IK+ +       L     D  D  +E+H  AGG E+ 
Sbjct: 76  LIEMAKEEN-SEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIHGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P  +  ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       V++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346


>gi|205375314|ref|ZP_03228104.1| peptide chain release factor 1 [Bacillus coahuilensis m4-4]
          Length = 356

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 182/355 (51%), Gaps = 28/355 (7%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   AV+ R   LN    DP +  +  + +   +E+      +   +E +D   +  D
Sbjct: 1   MFDRLQAVEDRYDKLNELLSDPEVVSDPKKLREYSKEQSGHQATVEAYREYKDAKEQYND 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSND---AYL 119
              +LE  L+ +   +++E    L+        +Q ESL      L    D ND     +
Sbjct: 61  AKQMLEDKLDPEMREMVKEEISELE--------EQIESLEERMKILLIPKDPNDDKNVIM 112

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           EV   AGG E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  A+ 
Sbjct: 113 EVRGAAGGEEAALFAGTLYRMYSRFAEMQGWKTEVIESSPTGLGGYKEIIFMINGNGAFS 172

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            +K E G HR+ R+   +S  R HTS +++   P  ++ +EIEI + D R+DT+ +SG G
Sbjct: 173 KMKYENGAHRVQRVPETESGGRIHTSTATVACLPEAEE-VEIEIHDKDIRVDTFASSGPG 231

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTT SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   
Sbjct: 232 GQSVNTTMSAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYD 289

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              K+ +G G    +IR+Y   P   V D R  +       +L+G +D+ + A +
Sbjct: 290 AQRKSAVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVIDALI 343


>gi|332885310|gb|EGK05561.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836]
          Length = 361

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 158/283 (55%), Gaps = 15/283 (5%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  L E+A EE D +       N +  KLE E K F  + +   DS +A +E+  G GG
Sbjct: 74  DDSELREIAKEEMDAA-------NERMPKLEEEIK-FLLVPADPQDSKNAIMEIRGGTGG 125

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY ++ E + +KTE   + +G   G K     + G   YG LK E GV
Sbjct: 126 DEAAIFAGDLYRMYQKYCEIKGWKTEITSVTEGTSGGFKEIIFTVTGEGVYGILKYESGV 185

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++ ++++I+ +D  + T R+SGAGGQ+VN  +
Sbjct: 186 HRVQRVPATETQGRVHTSAATVAVLPEAEE-VDVDINPADIEMQTARSSGAGGQNVNKVE 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           + V++TH P+G+VV CQQ RSQ  N+  A  MLR KLY++EL K   +  I    KT + 
Sbjct: 245 TKVQLTHKPSGLVVVCQQSRSQLANRELAMQMLRTKLYDIELSKY--MDAIASKRKTMVS 302

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            G    +IR+Y   P   + D R N+   + S V+DG++   +
Sbjct: 303 TGDRSAKIRTYNY-PQGRMTDHRINLTMYNLSAVMDGEIQPII 344


>gi|83816205|ref|YP_445488.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294507374|ref|YP_003571432.1| peptide chain release factor 1 [Salinibacter ruber M8]
 gi|119361602|sp|Q2S2U3|RF1_SALRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83757599|gb|ABC45712.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294343702|emb|CBH24480.1| peptide chain release factor 1 [Salinibacter ruber M8]
          Length = 357

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 189/346 (54%), Gaps = 14/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   + +   DP +  +    + L +E   L+  +  I   + RL D    LE 
Sbjct: 7   LDKVKHRFQEVESLMADPEVANDPDRMRELGQEHSRLEEVVEAIDRYE-RLLDERDELEG 65

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQ 131
            + ++   +     + L++++ +   VE    + L+  + +   +A +E+ AGAGG E+ 
Sbjct: 66  MIRDESGEMEALAKEELEQLETKLPAVEEDLKQKLIPKDPEEEKNAIVEIRAGAGGDEAS 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L R+YT++A+++ +  E ++   G + G +     +KG + YG LK E GVHR+ 
Sbjct: 126 LFAGDLFRLYTQYAKQQGWTYELIDASPGTQGGFREVIFAVKGEDVYGTLKYEAGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P  ++ ++++I+ SD  I+T++A+G GGQ VNTTDSAVR
Sbjct: 186 RVPETESSGRIHTSAATVAVLPEAEE-VDVDINPSDLTIETFKATGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H P+GV V CQ E+SQHKN+++A  +LR+++YE + ++++        S   +G G  
Sbjct: 245 IKHAPSGVEVSCQDEKSQHKNRSKAMRVLRSRVYEKKREEQQAEREEARRSM--VGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKD--LRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D  L    +  S   ++DG++D  + A  A
Sbjct: 303 SAKIRTYNF-PQDRVTDHRLEGGQKNHSLQPIMDGEIDPIIDALRA 347


>gi|163789460|ref|ZP_02183899.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
 gi|159875314|gb|EDP69379.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
          Length = 358

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 183/345 (53%), Gaps = 12/345 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   +V+ R   LN    DP +  +      L +E   +   ++     KE++  + D
Sbjct: 1   MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVEQDISD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGG 127
              +L   L+ +   + +E  ++L++ K E+E K    +L   E D  +  +E+   AGG
Sbjct: 61  TEDMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKVLMLPKDENDDRNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L  MY ++A+ + +KTE L+ +     G K  TL+I G N Y  LK E G 
Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWKTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ +E+++ + D R D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMPEAEE-VELDLPDKDIRTDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+   Q  +  +      K+ IG
Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQAAQ--SEYDAERKSAIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDA 341


>gi|156546340|ref|XP_001606563.1| PREDICTED: similar to ENSANGP00000017484 [Nasonia vitripennis]
          Length = 402

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/252 (39%), Positives = 153/252 (60%), Gaps = 13/252 (5%)

Query: 72  LLELALEEDDCSIL--QETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAG 126
           L EL  E+ D   L  +E   N  R+K E++ + F +L   LSG+ + ++  LE+ AG G
Sbjct: 101 LAELVEEDKDMKKLAEEEKLSNEARLK-EIDNELFSALAQSLSGD-NFDEIILEITAGVG 158

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   LL MY +      +  + +E+ +  + G + A+++I G  ++  L+ E G
Sbjct: 159 GQEAMLFVKNLLEMYIKHLSYLGYSYDIIEMDESPQGGCRHASIMISGKESFEKLRHEAG 218

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   + + R HTS  S+ V P  +D I++EI   D RIDT RASGAGGQHVNTT
Sbjct: 219 VHRVQRVPATEKSGRIHTSVVSVGVLPQPND-IQVEIHAKDLRIDTMRASGAGGQHVNTT 277

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVR+TH+PTG+ V+CQ +RSQ +N+  A   LRAK+YE +L +  ++ +  E  K ++
Sbjct: 278 NSAVRVTHLPTGMSVECQTDRSQIRNRELAMAKLRAKMYEQKLAR--QLRSASEMRKQQM 335

Query: 307 GWG---RQIRSY 315
           G G    +IR+Y
Sbjct: 336 GMGERHEKIRTY 347


>gi|224368815|ref|YP_002602976.1| PrfA [Desulfobacterium autotrophicum HRM2]
 gi|223691531|gb|ACN14814.1| PrfA [Desulfobacterium autotrophicum HRM2]
          Length = 391

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 178/349 (51%), Gaps = 19/349 (5%)

Query: 13  LFDWDNAVQRLSFLNTK-------TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           L D  N + +L  +  +         DP +  + ++ +  ++E   L   +S   + Q  
Sbjct: 32  LLDLQNMINKLQGIKERYIKLENLLSDPAVIADQVKYQRCLKEHGELTKVVSAFADYQAV 91

Query: 66  LCDNLILLELALEED-DCSIL--QETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           L       +LA + D D   +  +ET+D   QR  LE + K    +     D  +  LE+
Sbjct: 92  LQQMGEAKDLAKDPDPDIREMAKEETADLRAQREGLESKLKLL-LMPKDPRDDKNVILEI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +A  L RMY+R+AE + +    +E       G K    +IKG  A+   
Sbjct: 151 RAGTGGEEAGLFAADLFRMYSRYAEIKGWTVNVIESSHSSAGGFKEVISMIKGNGAFSAF 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G HR+ R+   ++  R HTS  ++ V P  +D +E++I  S+ ++D +RASG GGQ
Sbjct: 211 KYESGTHRVQRVPETETQGRVHTSAVTVAVLPEAED-VELKIEPSELKVDVFRASGPGGQ 269

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+V  CQ E+SQ KNK  A  +L+A++  L+   RE+ A     
Sbjct: 270 SVNTTDSAVRITHLPTGIVATCQDEKSQIKNKIAALKVLKARI--LDAMVREQEAKRAAQ 327

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            K ++G G    +IR+Y   P   + D R  +      +++ GD+ D +
Sbjct: 328 RKGQVGTGDRSGRIRTYNF-PQGRMTDHRIGLTLYRLDNIMGGDIQDII 375


>gi|227538599|ref|ZP_03968648.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241518|gb|EEI91533.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 357

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+  G GG E+  +A  L RMYTR+ E + ++ E +++ +G   G K   L +
Sbjct: 106 DAKNAIIEIRGGTGGDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G +AYG LK E GVHR+ R+   ++  R HTS +S+ V P  +D +++E++  D  + T
Sbjct: 166 IGDDAYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAED-VDVELNPGDIEMQT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++ V++TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+
Sbjct: 225 SRSGGAGGQNVNKVETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               +     KT +  G    ++R+Y   P   V + R  +   +   V+DGD+   + A
Sbjct: 285 H--GDTAAKRKTMVSTGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDA 341


>gi|325107093|ref|YP_004268161.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
 gi|324967361|gb|ADY58139.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
          Length = 358

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 138/236 (58%), Gaps = 7/236 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +A  L  MY+R+ E R +K E ++ H  E  G+K     + G  A+
Sbjct: 112 MEIRAGTGGDEAALFALNLYEMYSRYIETRGWKKEVMDFHPTEMGGVKEVVFSVSGEGAF 171

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L+ E G HR+ R+   ++  R HTS +++ V P  D+ +EI+I   D ++DT+RASG 
Sbjct: 172 HELQFESGGHRVQRVPETETQGRIHTSAATVAVLPEADE-VEIDIKPEDLKVDTFRASGP 230

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VN T+SA+RITH+PTG VV CQ E+SQHKN+A A  +LR+++  LE Q++   +  
Sbjct: 231 GGQKVNKTESAIRITHLPTGTVVTCQDEKSQHKNRASAMRVLRSRI--LENQQQAADSER 288

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +T IG G    +IR+Y   P   V D R  +       ++ G+L++ +   L
Sbjct: 289 ASQRRTLIGTGDRSSRIRTYNY-PQGRVTDHRIGLTLHKLDQIMAGNLEELVSGLL 343


>gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
 gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
          Length = 362

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 117/179 (65%), Gaps = 8/179 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  LLRMYTR+AE+R + TE ++  D +  G+K  +L I
Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAI 160

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  +D +++ +  
Sbjct: 161 KTKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAED-VDVSVDP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L
Sbjct: 220 NDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARL 278


>gi|325973695|ref|YP_004250759.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
 gi|325990139|ref|YP_004249838.1| peptide chain release factor 1 [Mycoplasma suis KI3806]
 gi|323575224|emb|CBZ40889.1| Peptide chain release factor 1 [Mycoplasma suis]
 gi|323652297|gb|ADX98379.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
          Length = 359

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 142/241 (58%), Gaps = 12/241 (4%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S + D  +  +E+H+ AGG E+  + + L   Y ++A + K+K   +++ + E  G+   
Sbjct: 105 SNKYDGKNIVIEMHSAAGGEEAAIFVSNLFDSYKKYANENKWKLNVVDLRESER-GLAFI 163

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           T  + G   Y  +K E GVHR+ R+   +S  R HTS  ++ V P  D+ IEI++  SD 
Sbjct: 164 TFTLSGSKVYSKMKYESGVHRVQRVPETESKGRVHTSTITVSVLPEADE-IEIQLDPSDI 222

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RID YRASGAGGQHVN T+SAVR+ HIPT ++V CQQERSQ  NK  A+ +L+ KL+E E
Sbjct: 223 RIDVYRASGAGGQHVNKTESAVRLVHIPTNIMVACQQERSQMLNKEIAFKILKTKLWERE 282

Query: 289 --LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             LQK E  +N+    K +IG G    +IR+Y   P   + D R  +   + + V++G  
Sbjct: 283 KKLQKEEFFSNL----KQQIGKGERAEKIRTYNY-PQNRITDHRILLTINNLTSVMEGHF 337

Query: 344 D 344
           +
Sbjct: 338 E 338


>gi|313606725|gb|EFR83443.1| peptide chain release factor 1 [Listeria monocytogenes FSL F2-208]
          Length = 309

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 170/300 (56%), Gaps = 16/300 (5%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--- 116
           K + +++ +   LL   L+++   + +E    LQ+ K ++E +    LL    D ND   
Sbjct: 3   KNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKADLEERL--KLLLVPKDPNDDKN 60

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             LE+   AGG E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +
Sbjct: 61  VILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGND 120

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A+  +K E G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++
Sbjct: 121 AFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFAST 179

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI 295
           GAGGQ VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE 
Sbjct: 180 GAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEY 239

Query: 296 -ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            AN     K+ +G G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 240 DAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 294


>gi|123966944|ref|YP_001012025.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9515]
 gi|229470357|sp|A2BYQ7|RF1_PROM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123201310|gb|ABM72918.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9515]
          Length = 364

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 183/340 (53%), Gaps = 17/340 (5%)

Query: 24  SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALE 78
           SF+N + +  DP +  N  + +++ +ER  L+  +    ++ D    + D+  LL+    
Sbjct: 16  SFVNLEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDDSRQLLKDNRN 75

Query: 79  EDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136
           + D  +L  E   NL+ +K  +  K   +LL  +  D     LE+ AGAGG E+  WA  
Sbjct: 76  DKDMELLINEELCNLEVLKNSLIQKVTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGD 135

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+ +K  +  + +   + +  G K   + IKG + Y  LK E GVHR+ R+   
Sbjct: 136 LARMYERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKFEAGVHRVQRVPAT 195

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P  D  +E++I  SD  I T R+ GAGGQ+VN  ++A+ + H P
Sbjct: 196 ESQGRVHTSTATVAVMPEAD-PVEVKIDPSDLEIGTARSGGAGGQNVNKVETAIDLIHKP 254

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+ V C QERSQ +N+ +A  +LRAKLYE++L++    AN  E S+  +  G   RS  
Sbjct: 255 TGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANDKERSQRLMQVGTGDRSEK 310

Query: 317 LQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352
           ++ Y   KD RT   +   +     +L G LD+ + A +A
Sbjct: 311 IRTYNF-KDNRTTDHRLGSNFALEPILAGQLDEVIDACIA 349


>gi|313636342|gb|EFS02127.1| peptide chain release factor 2 [Listeria seeligeri FSL S4-171]
          Length = 142

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 82/137 (59%), Positives = 100/137 (72%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ 
Sbjct: 1   LDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNRD 60

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E  +
Sbjct: 61  QAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGN 120

Query: 335 PSDVLDGDLDDFMKATL 351
              V+DGDLDDF+ A L
Sbjct: 121 IQAVMDGDLDDFINAYL 137


>gi|296445919|ref|ZP_06887870.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
 gi|296256587|gb|EFH03663.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
          Length = 356

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 140/244 (57%), Gaps = 13/244 (5%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD     LEV AG GG E+  +A  L R Y ++A  + +  E L   +G   G K     
Sbjct: 105 ADEKGVILEVRAGTGGDEAALFAGDLFRAYQKYAGVKGWGVEILSASEGALGGYKEIVAE 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   Y  LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++ I + D +I+
Sbjct: 165 ISGRGVYARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPQAEE-VDVAIDDKDLQIE 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R+ GAGGQHVN T+SA+RITH+P+G+VV  Q+ERSQH+N+A+A  +LR++L++ E Q+
Sbjct: 224 TMRSGGAGGQHVNKTESAIRITHLPSGIVVMMQEERSQHRNRAKAMEVLRSRLFDAERQR 283

Query: 292 REEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            +        A +G   ++E     +IR+Y   P   V D R N+       V++G+LD+
Sbjct: 284 LDSARAADRKAQVGSGDRSE-----RIRTYNF-PQGRVTDHRINLTLYKLDRVIEGELDE 337

Query: 346 FMKA 349
              A
Sbjct: 338 IFDA 341


>gi|261886265|ref|ZP_06010304.1| peptide chain release factor 1 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 355

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/321 (35%), Positives = 175/321 (54%), Gaps = 20/321 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76
           + R + LN+   DP +  ++     L +E+++L+   +A      I + + +N  LLE  
Sbjct: 10  IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLE-- 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA---YLEVHAGAGGTESQD 132
               D  + +   D L+ ++ E+   + E  L     D ND    +LE+ AG GG E+  
Sbjct: 68  ----DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L   Y R+ E+R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R
Sbjct: 124 FVGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P V+DS EI+I+ +D +ID  R+SG GGQ VNT+ S+VR+
Sbjct: 184 VPETESQGRVHTSAITVAIMPEVEDS-EIDINPNDLKIDVMRSSGHGGQSVNTSVSSVRV 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310
           THIPTG+VV  Q  +SQHKNK  A  +L+A+LY  ++Q+RE      +  K ++G G   
Sbjct: 243 THIPTGLVVVNQDGKSQHKNKDAAIKVLKARLY--DMQERERREKESKERKDQVGTGDRS 300

Query: 311 -QIRSYVLQPYQMVKDLRTNI 330
            +IR+Y   P   + D R N+
Sbjct: 301 GRIRTYNY-PQNRISDHRINL 320


>gi|23100453|ref|NP_693920.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
 gi|32171555|sp|Q8EM60|RF1_OCEIH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22778686|dbj|BAC14954.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
          Length = 356

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 181/335 (54%), Gaps = 11/335 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78
           R + LN    DP +  +  + +   +E+  L++ +      KE+ ++L D   ++E  L+
Sbjct: 11  RYNKLNEMLSDPEVINDSKKLREYSKEQSGLEDVVQAYREYKEVTEQLNDAKEMMEDKLD 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANML 137
           ++   +++     L   K E+E      LL  +  D  + ++E+   AGG E+  +A  L
Sbjct: 71  DEMYEMVKAEIAELNGRKEELESSMKILLLPKDPNDDKNVFMEIRGAAGGDEAALFAGDL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+AE + +K + +E       G K    +I G + Y  LK E G HR+ R+   +
Sbjct: 131 YRMYSRYAEHQGWKIDVMEASSTGVGGYKEVIFMINGSDVYSKLKYENGAHRVQRVPETE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P  +  +E+E+ + D R+DT+ +SG GGQ VNTT SAVR+TH+PT
Sbjct: 191 SGGRIHTSTATVAVLPEAE-EVEVEVHDKDIRVDTFASSGPGGQSVNTTMSAVRLTHVPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV  Q E+SQ KNK +A  +LRA++Y+   Q  E  A   E+ K+ +G G    +IR+
Sbjct: 250 GIVVSIQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDENRKSAVGSGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           Y   P   V D R  +       ++ G LD+F+ A
Sbjct: 308 YNF-PQNRVTDHRIGLTIQKLDQIMQGKLDEFIDA 341


>gi|317125570|ref|YP_004099682.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
 gi|315589658|gb|ADU48955.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
          Length = 359

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 142/242 (58%), Gaps = 11/242 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----- 173
           LEV AG GG ES  +A  LLRMY R+AE+R ++T   +  + +  G K   + I+     
Sbjct: 106 LEVKAGEGGEESALFAGDLLRMYLRYAERRGWRTVVEDATESDLGGYKDVRVSIRSRGHQ 165

Query: 174 -GPNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            GP    W  LK E GVHR+ R+   +S  R HTS + + V P  ++ +E+ I   D RI
Sbjct: 166 PGPGEAPWARLKYEGGVHRVQRVPVTESQGRVHTSAAGVLVMPEAEE-VEVTIDPHDLRI 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK  A  +LRA+L++L   
Sbjct: 225 DVYRSSGPGGQSVNTTDSAVRITHLPTGLVVSCQNEKSQLQNKEAALRVLRARLHQLAKD 284

Query: 291 KREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           + +  A+    S+   +    +IR+Y   P   + D RT  +  +   V+DGDLD  +++
Sbjct: 285 EADAEASAARRSQVRTVDRSERIRTYNF-PENRISDHRTGYKSYNLDHVIDGDLDPVVQS 343

Query: 350 TL 351
            +
Sbjct: 344 AI 345


>gi|149196233|ref|ZP_01873288.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
 gi|149140494|gb|EDM28892.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
          Length = 358

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/244 (37%), Positives = 141/244 (57%), Gaps = 7/244 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +E+   AGG E+  +A  L++MY  ++  + +K E +E    +  G+K+    +
Sbjct: 109 DSRNCIVEIRPAAGGDEAALFAEDLMKMYQIYSSNKSWKVEVMEYTPSDLGGLKATVFSV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + +  L  E GVHR+ RI   ++  R HTS  ++ V P  ++ +++ I   + + DT
Sbjct: 169 KGEDVFRELNFESGVHRVQRIPKTETQGRVHTSTVTVAVLPEAEE-VDLHIDPKELKFDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQ VNTTDSAVR+THIPTG+    QQERSQH+NK  A  +LR+KL  L+ + R
Sbjct: 228 YRSSGAGGQCVNTTDSAVRVTHIPTGLACYSQQERSQHQNKEIAMQLLRSKL--LDEKIR 285

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   + +  + +IG G    +IR+Y   P   + D R  +   +  DV+ G   D M  
Sbjct: 286 QEKQKMSDERRGQIGTGDRSERIRTYNY-PQSRITDHRFGVTVHNLPDVMAGKFADVMDK 344

Query: 350 TLAI 353
            LAI
Sbjct: 345 ILAI 348


>gi|227552473|ref|ZP_03982522.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257888289|ref|ZP_05667942.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257896821|ref|ZP_05676474.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257899725|ref|ZP_05679378.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|293378550|ref|ZP_06624713.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
 gi|293571480|ref|ZP_06682507.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|227178385|gb|EEI59357.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257824343|gb|EEV51275.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257833386|gb|EEV59807.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257837637|gb|EEV62711.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|291608485|gb|EFF37780.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|292642879|gb|EFF61026.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
          Length = 357

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY ++AE + +KTE +E +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I + D R D 
Sbjct: 166 TGENVYSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIEDKDIRTDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+ ++Q+ 
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQIKNREKAMKILRARVYD-KIQQ- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 360

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 159/297 (53%), Gaps = 10/297 (3%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDA 117
           KE+   + D   L++   EED   + +   D L  +R  LE E K    L S   D  + 
Sbjct: 53  KEVVSGIEDTEELIKETSEEDMLELAKSELDQLKAERDDLEEEIKVL-MLPSDPNDDKNI 111

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +E+   AGG E+Q +A  L  MY+R+AE + +  E  +    +  G K   L I G   
Sbjct: 112 IMEIRGAAGGDEAQLFAADLFEMYSRYAESQGWHVEVADASSNDLGGYKEIILQISGDKV 171

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS +++ V P ++D ++ EI E D R D YRASG
Sbjct: 172 YSKLKYESGAHRVQRVPKTESQGRVHTSTATVGVMPELED-LDFEIDEKDIRTDIYRASG 230

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN T SAVR+THIPTG+ V  Q +RSQ +N+ +A  +LR+++Y  +  + +E   
Sbjct: 231 AGGQHVNKTSSAVRMTHIPTGIQVAMQDQRSQQQNREKAMLILRSRVY--DYYQSQEQDE 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             E  K  +G G    +IR+Y   P   V D R N+       ++ G+LD+ + A +
Sbjct: 289 YDEKRKNLVGTGDRSERIRTYNY-PQNRVTDHRINLTLQKLDRIMGGELDEIIDALI 344


>gi|33862085|ref|NP_893646.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|81575585|sp|Q7UZX1|RF1_PROMP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33634303|emb|CAE19988.1| peptide chain release factor RF-1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 364

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 183/344 (53%), Gaps = 15/344 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLE 74
           NA +    L  +  DP +  N  + + + RER  L+  +    ++ D    + D+  LL+
Sbjct: 12  NASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGDSKQLLK 71

Query: 75  LALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132
               + D  S++ E   +L+ +K ++  K   +LL  +  D     LE+ AGAGG E+  
Sbjct: 72  ENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAGGNEACI 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+ R
Sbjct: 132 WAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P  D  +E++I  ++  I T R+ GAGGQ+VN  ++A+ +
Sbjct: 192 VPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTEIEIGTARSGGAGGQNVNKVETAIDL 250

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L++    AN  E S+  +  G   
Sbjct: 251 IHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLMQVGSGD 306

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352
           RS  ++ Y   KD RT   +   +     +L G LDD + A LA
Sbjct: 307 RSEKIRTYNF-KDNRTTDHRLGSNFALEPILAGQLDDVIYACLA 349


>gi|90422036|ref|YP_530406.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB18]
 gi|119361591|sp|Q21BZ9|RF1_RHOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90104050|gb|ABD86087.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB18]
          Length = 361

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/241 (39%), Positives = 142/241 (58%), Gaps = 8/241 (3%)

Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           +LL  +A D  +  LE+ AG GG E+  +A  L RMY ++A  + +  E +   +G   G
Sbjct: 100 ALLPKDAMDDRNVMLEIRAGTGGDEASLFAGDLFRMYEKFAVLQGWSVEVVSASEGTMGG 159

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            K     +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V++ ++++I 
Sbjct: 160 YKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDVDIK 218

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D RI+T RA GAGGQHVN T+SA+RITHIPTG+ V  Q  RSQHKN+A A N+LR+++
Sbjct: 219 PDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGLQVMMQDSRSQHKNRASAMNILRSRI 278

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E Q+ + + +     K ++G G    +IR+Y   P   V D R N+       V+ G
Sbjct: 279 YDAEQQRIDSVRS--AERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAG 335

Query: 342 D 342
           +
Sbjct: 336 E 336


>gi|73748899|ref|YP_308138.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|147669660|ref|YP_001214478.1| peptide chain release factor 1 [Dehalococcoides sp. BAV1]
 gi|289432895|ref|YP_003462768.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
 gi|119361532|sp|Q3ZYA9|RF1_DEHSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039969|sp|A5FQC5|RF1_DEHSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|73660615|emb|CAI83222.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|146270608|gb|ABQ17600.1| bacterial peptide chain release factor 1 (bRF-1) [Dehalococcoides
           sp. BAV1]
 gi|288946615|gb|ADC74312.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
          Length = 355

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 192/348 (55%), Gaps = 20/348 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
            +N  +R   +  +   P +  +    + L +ER  L + +      K +   L +   L
Sbjct: 5   LENCEKRFIEIEEEISKPEVINDARLVRTLAQERADLQDKVEMYRRYKTMAKELEEAKNL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTES 130
           LE   +ED   +++   +NL++   ++ Y+Q  FE L     D     +E+ AG GG E+
Sbjct: 65  LESEKDEDMRGMVRGEIENLEKSLTDL-YEQMTFELLPKDPNDDKSIIMEIRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L +MY R+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+
Sbjct: 124 GLFASDLYKMYIRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P V++ ++I+I+  + R+D + +SGAGGQ+V    +A+
Sbjct: 184 QRVPQTEASGRIHTSTATVAVLPQVEE-VDIDINMDEVRVDIFHSSGAGGQNVQKVATAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKT 304
           R+TH+PTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E       A +G++ ++
Sbjct: 243 RLTHMPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRS 302

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     +IR+Y   P   + D R  +   +   +L+G LD+ +  TLA
Sbjct: 303 E-----KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIID-TLA 343


>gi|332290785|ref|YP_004429394.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168871|gb|AEE18126.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 359

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 142/238 (59%), Gaps = 4/238 (1%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171
           D+ +  +E+ AG GG E+  +A  L RMYT++ +    +K   ++  +G   G K     
Sbjct: 106 DAKNVVVEIRAGTGGDEASIFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFE 165

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G + YG +K E GVHR+ R+   ++  R HTS +++ V P  ++  +++I   D R+D
Sbjct: 166 ITGQDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVQIEPKDVRVD 224

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K
Sbjct: 225 FFCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAK 284

Query: 292 REEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           ++E      +S+   G    +IR+Y   P   V D R  +      ++++GD+   ++
Sbjct: 285 KQEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILE 341


>gi|69249626|ref|ZP_00605024.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257880056|ref|ZP_05659709.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257882292|ref|ZP_05661945.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257885488|ref|ZP_05665141.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257891147|ref|ZP_05670800.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257893961|ref|ZP_05673614.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|258614612|ref|ZP_05712382.1| peptide chain release factor 1 [Enterococcus faecium DO]
 gi|260560331|ref|ZP_05832507.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|261208268|ref|ZP_05922941.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289565643|ref|ZP_06446089.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|293553327|ref|ZP_06673963.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|293563060|ref|ZP_06677526.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|293567649|ref|ZP_06678992.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|294615325|ref|ZP_06695200.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|294617194|ref|ZP_06696846.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|294623635|ref|ZP_06702473.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|314937739|ref|ZP_07845061.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|314942363|ref|ZP_07849210.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|314947687|ref|ZP_07851096.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
 gi|314952118|ref|ZP_07855137.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|314992371|ref|ZP_07857803.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|314997442|ref|ZP_07862389.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|68194105|gb|EAN08645.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257814284|gb|EEV43042.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257817950|gb|EEV45278.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257821344|gb|EEV48474.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257827507|gb|EEV54133.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257830340|gb|EEV56947.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|260073676|gb|EEW62002.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|260077525|gb|EEW65243.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289162611|gb|EFD10465.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|291589584|gb|EFF21389.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|291591828|gb|EFF23462.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|291596539|gb|EFF27780.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|291596961|gb|EFF28174.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|291602551|gb|EFF32767.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|291604974|gb|EFF34442.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|313588451|gb|EFR67296.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|313593096|gb|EFR71941.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|313595737|gb|EFR74582.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|313598876|gb|EFR77721.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|313642877|gb|EFS07457.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|313645928|gb|EFS10508.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
          Length = 357

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY ++AE + +KTE +E +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N Y  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I + D R D 
Sbjct: 166 TGDNVYSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIEDKDIRTDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+ ++Q+ 
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQIKNREKAMKILRARVYD-KIQQ- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|47218188|emb|CAF97052.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 409

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 126/208 (60%), Gaps = 6/208 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD N+  LEV AG GG E+  +   +  MY  +A+   +  + LE    +  G++ A+ 
Sbjct: 153 EADLNELVLEVTAGVGGQEAMLFTAEVFDMYQGYAQHHGWSFDTLEYMTSDLGGLRHASA 212

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   Y  +K E GVHR+ R+   +   R HTS  ++ V P   + I   I++ D RI
Sbjct: 213 SISGRLCYKKMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAVLPQPTE-ISFTINQKDLRI 271

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ +A   LRAKLY L+L+
Sbjct: 272 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVAECQQERSQLKNREKAMKALRAKLYSLKLE 331

Query: 291 KREEIANIGESSKTEIGW-GR--QIRSY 315
             EE +      K +IG  GR  +IR+Y
Sbjct: 332 --EETSKRYNQRKIQIGTKGRSEKIRTY 357


>gi|28493402|ref|NP_787563.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
 gi|28572487|ref|NP_789267.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28410619|emb|CAD67005.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28476443|gb|AAO44532.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
          Length = 347

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/264 (38%), Positives = 147/264 (55%), Gaps = 9/264 (3%)

Query: 96  KLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           KL     + +SLL+   E D  D  +E+  G GG ES  +A  LLRMY  +A+   +K E
Sbjct: 79  KLSDAQARLQSLLTRRDENDHRDVIMEIKGGEGGAESALFAADLLRMYAYFADSNGWKVE 138

Query: 154 ALEIHDGEEAGIKSATLLI-KGPNA----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            L   +    G K   L I K P++    +  LK E GVHR+ R+   +S  R HTS + 
Sbjct: 139 ILSYSENTLGGYKDVQLAIRKTPSSTHGVWELLKYEGGVHRVQRVPATESQGRIHTSTTG 198

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V+P VD   EIEI+  + RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+S
Sbjct: 199 VLVFPEVDAPGEIEITNDEIRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKS 258

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLR 327
           Q +N+  A  +LRA+L      + E+  +    S+   +    +IR+Y   P   V D R
Sbjct: 259 QIQNRESAMRILRARLIAKRQDEIEKTTHAARKSQIRAMDRSERIRTYNF-PENRVVDHR 317

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
           T  +  +   VL+GD+   +++ +
Sbjct: 318 TGYKAYNLDQVLNGDVSQLIRSCI 341


>gi|327262069|ref|XP_003215848.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Anolis carolinensis]
          Length = 394

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/225 (42%), Positives = 134/225 (59%), Gaps = 9/225 (4%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D +D  +EV +G GG E+  +   +  MY ++A  + +  + LE    +  G++ A
Sbjct: 130 SEETDESDLIMEVTSGVGGQEAMLFTAEMFDMYQQYAAYKNWNFDILEYAPSDIGGLRYA 189

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P  ++ I + I+  + 
Sbjct: 190 SAAIAGHEAYRQMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPNE-INLTINPKEL 248

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RI+T RASGAGGQHVNTTDSAVRI HIPTGVV +CQQERSQ KNKA+A  +LRAKLY ++
Sbjct: 249 RIETKRASGAGGQHVNTTDSAVRILHIPTGVVSECQQERSQIKNKAKAIQILRAKLYNMK 308

Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           L+    KRE    I   +K   G   +IR+Y   P   V D R +
Sbjct: 309 LEDESRKRETARKIQTGTK---GRSEKIRTYNF-PQDRVTDHRIS 349


>gi|302820744|ref|XP_002992038.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
 gi|300140160|gb|EFJ06887.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
          Length = 654

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 128/198 (64%), Gaps = 8/198 (4%)

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GEEAGIKSATL I G  AYG++ GE+G HRLVR  P++S   R TSF+ + V  V     
Sbjct: 119 GEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQLPFNSKGLRQTSFAGVEVMHVRTKLN 178

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
             +  ++       R+ G GGQ+VN  ++AVR+THIPTG+ ++C ++RSQ +NK +A  +
Sbjct: 179 STQPGQA----TLCRSGGKGGQNVNMVETAVRVTHIPTGIALRCSEKRSQLQNKIKAIVL 234

Query: 280 LRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           L++KL   LE Q+  EI  I G+  K E  WG+QIR+YV  PY++V DLRTN+E +  S 
Sbjct: 235 LKSKLLVILEDQRAAEIKEIRGDVVKAE--WGQQIRNYVFHPYKLVMDLRTNVETSDISG 292

Query: 338 VLDGDLDDFMKATLAIKK 355
           ++DG L+  + A L  K+
Sbjct: 293 IMDGKLEPLLTAYLMSKQ 310


>gi|225159115|ref|ZP_03725422.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
 gi|224802321|gb|EEG20586.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
          Length = 373

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 173/344 (50%), Gaps = 28/344 (8%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   L+ +   P  + +   A  + RE Q +   ++      D       L E+A  E 
Sbjct: 12  RRADELDAQMRSPTFYNDARAAAAVTREHQQVTQLLA------DHAAHRKTLAEIA--EA 63

Query: 81  DCSILQETSDNLQRIKLEVEYKQ--------FESLLSG-----EADSNDAYLEVHAGAGG 127
              I   ++D   R   E E  +        F ++L+G       DS D  LE+ AG GG
Sbjct: 64  QALIKDPSADPDLRELAEAELPELEARRERLFRTVLAGMIPPEPTDSRDTVLEIRAGTGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE R +  E     + E  G +  + +I+G + Y  LK E GV
Sbjct: 124 EEAALFAAELARMYHRYAEDRGWTVEPTGSSESERGGFREVSFIIRGQDVYKQLKFESGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++N R HTS  ++ V P   + ++I I   D  I   RASG GGQ VNTTD
Sbjct: 184 HRVQRVPLTEANGRIHTSTVTVAVLPEAQE-VDIRIDPQDLEITVQRASGPGGQGVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRI H PTG++V C   RSQ KNKA A ++LRA+L  L+ ++ EE A      + +IG
Sbjct: 243 SAVRIVHKPTGMIVYCADGRSQQKNKASAMSVLRARL--LQRKQDEEAAKYAAQRRGQIG 300

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            G    +IR+Y   P   + D R  +   S + V++G L++ ++
Sbjct: 301 TGDRSERIRTYNF-PQNRLTDHRIGLTLYSLTQVMEGALNEVVQ 343


>gi|313622330|gb|EFR92817.1| peptide chain release factor 1 [Listeria innocua FSL J1-023]
          Length = 358

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 191/349 (54%), Gaps = 16/349 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           ++D   AV+ R   LN    DP +  +    + L +E+  +   +   +E   I +++ +
Sbjct: 1   MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNINEQIDE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              LL   L+++   + +E    LQ+ K E+E +    L+  +  D  +  LE+   AGG
Sbjct: 61  TRELLGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G 
Sbjct: 121 DEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305
           SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K+ 
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|161507266|ref|YP_001577220.1| peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260102570|ref|ZP_05752807.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
 gi|172048215|sp|A8YUJ1|RF1_LACH4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160348255|gb|ABX26929.1| Peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260083597|gb|EEW67717.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
          Length = 362

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+E+A EE+   I +E  +   +IK+ +       L     D  D  +E+   AGG E+ 
Sbjct: 76  LIEMAKEEN-AEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P  +  ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  IG G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAIGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       V++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346


>gi|256850891|ref|ZP_05556280.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260661105|ref|ZP_05862019.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|282934197|ref|ZP_06339475.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297205768|ref|ZP_06923163.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
 gi|256615953|gb|EEU21141.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260548042|gb|EEX24018.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|281301811|gb|EFA94077.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297148894|gb|EFH29192.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
          Length = 362

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 140/243 (57%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + +K   ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I++   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    + 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A+  E  K  +G G    +IR+Y   P   V D R  +       +++G+LD+ + A
Sbjct: 288 Q--ASYDEKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISA 344

Query: 350 TLA 352
            + 
Sbjct: 345 LIV 347


>gi|323356873|ref|YP_004223269.1| protein chain release factor A [Microbacterium testaceum StLB037]
 gi|323273244|dbj|BAJ73389.1| protein chain release factor A [Microbacterium testaceum StLB037]
          Length = 368

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/248 (38%), Positives = 147/248 (59%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+  G GG ES  +A  LLRMY ++A    +KTE LE  + +  G K   + I
Sbjct: 110 DARDVIMEIKGGEGGAESALFAADLLRMYLQYAASMGWKTELLERTESDLGGYKDVQVAI 169

Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG ++      +  LK E GVHR+ R+   +S  R HTS + + V+P VD+  E+ I  +
Sbjct: 170 KGSSSDPAQGVWAHLKYEGGVHRVQRVPATESQGRIHTSTTGVLVFPEVDEPEEVAIDPN 229

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA+L  
Sbjct: 230 DLKIDVFRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREAGMRVLRARLLA 289

Query: 287 LELQKREEIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            + ++R+ +A   ++ +++I G  R  +IR+Y   P   + D RT  +  +   V+DG L
Sbjct: 290 KQQEERDAVA--ADARRSQIRGMDRSERIRTYNF-PENRIADHRTGYKAYNLDQVMDGAL 346

Query: 344 DDFMKATL 351
              +++ +
Sbjct: 347 GPIIESAI 354


>gi|269128128|ref|YP_003301498.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
 gi|268313086|gb|ACY99460.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
          Length = 361

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 143/245 (58%), Gaps = 11/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LE+ AG GG ES  +A  LLRMY R+AE+  +KTE L     +  G K  T+ +
Sbjct: 98  DDKDVILEIKAGEGGEESALFAGDLLRMYLRYAERIGWKTEILSSQPSDLGGYKDVTVAV 157

Query: 173 K---GPN-----AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           K   GP+     A+  LK E GVHR+ R+   +S  R HTS   + V P  ++ I+++I 
Sbjct: 158 KARPGPDGEPIGAWSHLKFEGGVHRVQRVPVTESQGRIHTSAVGVLVTPEAEE-IDVQID 216

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ E+SQ +NK QA  +LR++L
Sbjct: 217 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKEQAMRILRSRL 276

Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             L  Q+ E  A     S+   +    ++R+Y   P   + D R   +  +   VLDGDL
Sbjct: 277 LALAQQEAEAAAAAERRSQVRTVDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGDL 335

Query: 344 DDFMK 348
            + ++
Sbjct: 336 HNVIQ 340


>gi|309791603|ref|ZP_07686096.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
 gi|308226321|gb|EFO80056.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
          Length = 360

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 175/349 (50%), Gaps = 24/349 (6%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA-KMLMRERQHLDNAISFIKEIQDRLCD 68
           LG L      V  LS L     +    + V+ A +   R RQ  + A + + E  D    
Sbjct: 15  LGELMAQPEVVNNLSLLQQYAREQRELEEVVNAFQAYQRARQAAEEAHTMLNESSD---- 70

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              + ELA EE +    Q T     RI    E  +   L     D+ D  +E+  G GG 
Sbjct: 71  -AEMRELAHEELES---QRT-----RIAQLEEEIKLLLLPRDPNDAKDVIIEIRQGEGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE R +K E   I D    G K A   I+G NAY  LK E GVH
Sbjct: 122 EAALFAADLYRMYVRYAELRGWKVEVDSITDNGIGGFKEAVFEIRGENAYSQLKYEGGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P V+ ++ IEI + D R D +R+ G GGQ VNTTDS
Sbjct: 182 RVQRVPATEARGRIHTSTATVAVMPEVEPTV-IEIKDEDVRTDVFRSGGHGGQGVNTTDS 240

Query: 249 AVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           AVR+ +    P  +VV CQ  RSQ KN+ +A ++LRAKLY  E +K++     G S   +
Sbjct: 241 AVRLVYRGGTPDEIVVTCQDGRSQIKNREKAMSVLRAKLYAREQEKQQRAQ--GASRLAQ 298

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   + D R     ++   VL G+LD  + A +
Sbjct: 299 VGTGERAEKIRTYNF-PQDRITDHRIGQNFSNLPGVLAGNLDKIIDALI 346


>gi|84494539|ref|ZP_00993658.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
 gi|84384032|gb|EAP99912.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
          Length = 360

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 142/240 (59%), Gaps = 10/240 (4%)

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK------ 173
           EV AG GG ES  +A  LLRMY R+AE+R ++TE L   + +  G K   + +K      
Sbjct: 107 EVKAGEGGEESALFAGDLLRMYLRYAERRGWRTEVLGSTETDLGGFKDVQVSVKSKKAPL 166

Query: 174 -GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +  LK E GVHR+ R+   ++  R HTS + +WV P  ++ +E+EI  +D RID 
Sbjct: 167 PGEGPWARLKYEGGVHRVQRVPITETQGRIHTSAAGVWVMPEAEE-VEVEIHANDLRIDV 225

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QK 291
           +R+SG GGQ VNTTDSAVR+TH+PTG VV CQ E+SQ +N+  A  +LRA+L+++ + + 
Sbjct: 226 FRSSGPGGQSVNTTDSAVRLTHLPTGTVVICQNEKSQLQNREAAMRVLRARLHQMAMDEA 285

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               A+I  S    +    +IR+Y     + + D RT  +  +   VL G+LD  +++ +
Sbjct: 286 NAASADIRASQVRTVDRSERIRTYNFAENR-ISDHRTGFKAYNLDTVLGGELDAVVESAM 344


>gi|315283708|ref|ZP_07871812.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
 gi|313612648|gb|EFR86686.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
          Length = 358

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 191/349 (54%), Gaps = 16/349 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           ++D   AV+ R   LN    DP +  +    + L +E+  +   +   +E   + +++ +
Sbjct: 1   MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNEQINE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              LL   L+++   + +E    LQ+ K E+E +    L+  +  D  +  LE+   AGG
Sbjct: 61  TKELLGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G 
Sbjct: 121 DEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305
           SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K+ 
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|213962214|ref|ZP_03390478.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
 gi|213955220|gb|EEB66538.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
          Length = 357

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 170/304 (55%), Gaps = 13/304 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           K LM +R+   N    + E ++ + D  +  ++E+A  +     L E+ + L +++ E++
Sbjct: 42  KELMDKREEYINVTGNLAEAEEIIADGSDAEMVEMAKLQ-----LDESKERLPQLEEEIK 96

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           Y     +     D+ +A +E+ AG GG E+  +A  L RMYT++ + + + T  ++ ++G
Sbjct: 97  YM---LIPKDPEDAKNAVMEIRAGTGGDEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEG 153

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
              G K     + G N YG LK E GVHR+ R+   ++  R HTS +++ V P  ++  +
Sbjct: 154 TAGGYKEIIFEVTGDNVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FD 212

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +E++ +D  I    ++G GGQ VNTT SA+++ HIPTG+ V+CQ E+SQHKN  +A  +L
Sbjct: 213 VELNMADVNIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVL 272

Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           R++LYELEL K+ E  +    S    G    +IR+Y   P   V D R  +      +V+
Sbjct: 273 RSRLYELELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVI 331

Query: 340 DGDL 343
           +GD+
Sbjct: 332 NGDV 335


>gi|256820779|ref|YP_003142058.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|315223922|ref|ZP_07865767.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
 gi|256582362|gb|ACU93497.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|314946094|gb|EFS98098.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
          Length = 357

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 171/304 (56%), Gaps = 13/304 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           K LM +R    N    ++E ++ + D  +  ++E+A  +     L+E+ + L +++ E++
Sbjct: 42  KELMDKRDEYINVTGNLQEAEEIIADGSDAEMVEMAKLQ-----LEESKERLPQLEEEIK 96

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           Y     +     D+ +A +E+ AG GG E+  +A  L RMYT++ + + + T  ++ ++G
Sbjct: 97  YM---LIPKDPEDAKNAVMEIRAGTGGDEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEG 153

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
              G K     + G N YG LK E GVHR+ R+   ++  R HTS +++ V P  ++  +
Sbjct: 154 TAGGYKEIIFEVTGDNVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVIVLPEAEE-FD 212

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +E+  +D +I    ++G GGQ VNTT SA+++ HIPTG+ V+CQ E+SQHKN  +A  +L
Sbjct: 213 VELDMADVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVL 272

Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           R++LYE+EL K+ E  +    S    G    +IR+Y   P   V D R  +      +V+
Sbjct: 273 RSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVI 331

Query: 340 DGDL 343
           +GD+
Sbjct: 332 NGDV 335


>gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rhodococcus jostii RHA1]
 gi|119361595|sp|Q0SGN8|RF1_RHOSR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110818014|gb|ABG93298.1| peptide chain release factor RF1 [Rhodococcus jostii RHA1]
          Length = 359

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/281 (40%), Positives = 159/281 (56%), Gaps = 11/281 (3%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWA 134
           L  DD S   E  + L+   LE++ K    LL+     D +D  LEV +G GG ES  +A
Sbjct: 69  LAADDSSFAAEVPE-LEAQVLELD-KALTDLLAPRDPHDGDDVVLEVKSGEGGEESALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHR 189
           + L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR
Sbjct: 127 SDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +  
Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   + D R   +  +   VLDG+LD  + A
Sbjct: 307 SERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDA 346


>gi|323466867|gb|ADX70554.1| Peptide chain release factor 1 [Lactobacillus helveticus H10]
          Length = 362

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+E+A EE+   I +E  +   +IK+ +       L     D  D  +E+   AGG E+ 
Sbjct: 76  LIEMAKEEN-AEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P  +  ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       V++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346


>gi|313631914|gb|EFR99059.1| peptide chain release factor 1 [Listeria seeligeri FSL N1-067]
          Length = 358

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  L RMY+++AE R +K E ++ +     G K    ++
Sbjct: 106 DDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G +A+  +K E G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT
Sbjct: 166 NGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           + ++GAGGQ VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + 
Sbjct: 225 FASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREA 284

Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           REE  AN     K+ +G G    +IR+Y   P   V D R  +       +++G LD+ +
Sbjct: 285 REEYDAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEII 339

Query: 348 KATL 351
            A +
Sbjct: 340 DALI 343


>gi|300789609|ref|YP_003769900.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
 gi|299799123|gb|ADJ49498.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
          Length = 356

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 144/243 (59%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+ +G GG ES  +A  LLRMY R+AE+  +K E L+  D +  G K  TL I
Sbjct: 101 DGSDVVMEIKSGEGGEESALFAGDLLRMYLRYAERHGWKAEVLDSVDSDLGGFKDVTLSI 160

Query: 173 KGPNA-----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           K   A     +  LK E GVHR+ R+   +S  R HTS S + +Y    + +E+EI  +D
Sbjct: 161 KSKAAAVDGVWSRLKFEGGVHRVQRVPATESQGRIHTSASGVLIY-PEPEEVEVEIDPND 219

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A+A  +L+A+L  +
Sbjct: 220 LRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAV 279

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++    A+    S+   +    ++R+Y   P   + D R N +  +   VLDGDLD  
Sbjct: 280 AEEEAAAKASDARRSQVRTVDRSERVRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGV 338

Query: 347 MKA 349
           + A
Sbjct: 339 LDA 341


>gi|312375908|gb|EFR23156.1| hypothetical protein AND_13424 [Anopheles darlingi]
          Length = 406

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 22/283 (7%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           NV+E   +  +R+ +   +  +KE++D   D +I  +L  EE +       S+ L R+  
Sbjct: 85  NVVE---MYEQRKIVVENLGSLKELKDDKDDEMI--QLLKEEREA-----YSNILGRLDR 134

Query: 98  EVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           E+     E +LS + D       +EV AG GG E+  +A  L  MY  + E + ++ E L
Sbjct: 135 EI----MEGILSMDEDEEYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEHKDWEVEML 190

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +    +  GI+ AT++I G + Y  LK E GVHR+ RI   + + R HTS  ++ + P  
Sbjct: 191 QTEGTDLGGIRHATIIINGTDVYRCLKYEGGVHRVQRIPATEKSGRIHTSTVTVAIIPRP 250

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD  E+++ E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  
Sbjct: 251 DD-FEVDLKEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQVKNREI 309

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           A   L AKL + EL+ R   A+     K+++G      +IR+Y
Sbjct: 310 AKQKLVAKLMQQELEAR--FASTQALKKSQVGQSLRNEKIRTY 350


>gi|284032945|ref|YP_003382876.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
 gi|283812238|gb|ADB34077.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
          Length = 359

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 142/245 (57%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  DA LE+ AG GG ES  +A  LL+MY ++AE + +KTE L+  + +  G KS T+ +
Sbjct: 100 DDKDAILEIKAGEGGDESALFAGDLLKMYLKFAETQNWKTEVLDSAESDLGGYKSITVAV 159

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   Y  LK E GVHR+ R+   +S  R HTS + + V P  +D +++EI  
Sbjct: 160 KAKGTPEPGEAPYAKLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAED-VDVEIDP 218

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+ QA  +LR++L 
Sbjct: 219 NDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRSRLL 278

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +  ++ A+    S+   +    +IR+Y   P     D R   +  +   VL GDL 
Sbjct: 279 AAAQEAADQEASDARRSQIRTVDRSERIRTYNF-PENRFSDHRVGYKAHNLDQVLGGDLA 337

Query: 345 DFMKA 349
             ++A
Sbjct: 338 PVIQA 342


>gi|16801748|ref|NP_472016.1| peptide chain release factor 1 [Listeria innocua Clip11262]
 gi|116873908|ref|YP_850689.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|20139333|sp|Q927V0|RF1_LISIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123466615|sp|A0ALM8|RF1_LISW6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16415223|emb|CAC97913.1| prf1 [Listeria innocua Clip11262]
 gi|116742786|emb|CAK21910.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|313617102|gb|EFR89654.1| peptide chain release factor 1 [Listeria innocua FSL S4-378]
          Length = 358

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 191/349 (54%), Gaps = 16/349 (4%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           ++D   AV+ R   LN    DP +  +    + L +E+  +   +   +E   + +++ +
Sbjct: 1   MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQIDE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127
              LL   L+++   + +E    LQ+ K E+E +    L+  +  D  +  LE+   AGG
Sbjct: 61  TRELLGEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G 
Sbjct: 121 DEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305
           SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K+ 
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|313636275|gb|EFS02086.1| peptide chain release factor 1 [Listeria seeligeri FSL S4-171]
          Length = 358

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  L RMY+++AE R +K E ++ +     G K    ++
Sbjct: 106 DDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G +A+  +K E G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT
Sbjct: 166 NGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           + ++GAGGQ VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + 
Sbjct: 225 FASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREA 284

Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           REE  AN     K+ +G G    +IR+Y   P   V D R  +       +++G LD+ +
Sbjct: 285 REEYDAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVI 339

Query: 348 KATL 351
            A +
Sbjct: 340 DALI 343


>gi|289435805|ref|YP_003465677.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172049|emb|CBH28595.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 358

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  L RMY+++AE R +K E ++ +     G K    ++
Sbjct: 106 DDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G +A+  +K E G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT
Sbjct: 166 NGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           + ++GAGGQ VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + 
Sbjct: 225 FASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREA 284

Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           REE  AN     K+ +G G    +IR+Y   P   V D R  +       +++G LD+ +
Sbjct: 285 REEYDAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEII 339

Query: 348 KATL 351
            A +
Sbjct: 340 DALI 343


>gi|332671313|ref|YP_004454321.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
 gi|332340351|gb|AEE46934.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
          Length = 362

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 142/247 (57%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  LE+ AG GG ES  +A  LLRMYTR+AE+  ++T+ LE  + +  G K   L +
Sbjct: 103 DARDVILEIKAGEGGEESALFAGDLLRMYTRYAERMGWQTQVLESTESDLGGFKDVHLSV 162

Query: 173 KGPNA-------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K   A       +  LK E GVHR+ R+   +S  R HTS + + V P  +D  E++I  
Sbjct: 163 KARGAVAPEDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEDEGEVDIDP 222

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L 
Sbjct: 223 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLL 282

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               ++    A+    S+   +    +IR+Y   P   + D RT  +  +   VL GDL 
Sbjct: 283 AARQEEAAAAASQARRSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLG 341

Query: 345 DFMKATL 351
             +++ +
Sbjct: 342 PVVQSAI 348


>gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 [Mycobacterium gilvum PYR-GCK]
 gi|315443360|ref|YP_004076239.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
 gi|189039980|sp|A4T8L3|RF1_MYCGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145215381|gb|ABP44785.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           gilvum PYR-GCK]
 gi|315261663|gb|ADT98404.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
          Length = 357

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/315 (37%), Positives = 168/315 (53%), Gaps = 15/315 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP L  +   A+ + R    +   ++  ++++    D     ELA   DD S  
Sbjct: 18  LEQRLADPDLHADAGAARKVGRRFAQISPIVATYRKLEAARGDLEAARELAA--DDASFA 75

Query: 86  QETSDNLQRI-KLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            E  +   +I  L+   +    LL+     D++D  LEV +G GG ES  +A  L RMY 
Sbjct: 76  AEVDELTDQIGDLD---RALTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYI 132

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYD 197
           R+AE+  +    L     +  G K ATL I  KG +A G W  LK E GVHR+ R+   +
Sbjct: 133 RYAERHGWTVTMLGETTSDLGGYKDATLSIASKGDSADGVWARLKFEGGVHRVQRVPVTE 192

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS + + VYP  D+  +++I ESD R+D YR+SG GGQ VNTTDSAVRITH+PT
Sbjct: 193 SQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRVDVYRSSGKGGQGVNTTDSAVRITHLPT 252

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYV 316
           G+VV CQ ERSQ +NKA+A  +L A+L  L E Q   + +    S    +    +IR+Y 
Sbjct: 253 GIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERIRTYN 312

Query: 317 LQPYQMVKDLRTNIE 331
             P   + D R N +
Sbjct: 313 F-PENRIADHRINFK 326


>gi|171920548|ref|ZP_02695589.3| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185178800|ref|ZP_02554523.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024350|ref|ZP_02570606.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518435|ref|ZP_02556548.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524208|ref|ZP_02557610.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867475|ref|ZP_03079479.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273256|ref|ZP_03205792.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225550782|ref|ZP_03771731.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225551438|ref|ZP_03772384.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903245|gb|EDT49534.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209423|gb|EDU06466.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018616|gb|EDU56656.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188998234|gb|EDU67331.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195660120|gb|EDX53500.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660951|gb|EDX54204.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249776|gb|EDY74556.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225379253|gb|EEH01618.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|225379936|gb|EEH02298.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 359

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 138/244 (56%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG ES  +   L   Y  + E   +K + +E+      G    + +I
Sbjct: 110 DDKNVIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNA-VGFSFISFMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D +++ I+ SD RIDT
Sbjct: 169 SGEEVYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLPE-QDEVDVVINPSDLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YRASGAGGQHVN T+SAVRITHIPTGVV  CQ+ +SQ +N+  A  MLRAKL+E  + Q+
Sbjct: 228 YRASGAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQ 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             E AN+    K ++G G    +IR+Y   P   V D R ++       ++ G+LD+ + 
Sbjct: 288 NAEFANL---RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIID 343

Query: 349 ATLA 352
           A +A
Sbjct: 344 ALIA 347


>gi|227877271|ref|ZP_03995344.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256842834|ref|ZP_05548322.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256848802|ref|ZP_05554236.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|262045800|ref|ZP_06018764.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|293381669|ref|ZP_06627650.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295692623|ref|YP_003601233.1| peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|312977646|ref|ZP_07789393.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
 gi|227863127|gb|EEJ70573.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256614254|gb|EEU19455.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256714341|gb|EEU29328.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|260573759|gb|EEX30315.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|290921716|gb|EFD98737.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295030729|emb|CBL50208.1| Peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|310895385|gb|EFQ44452.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
          Length = 362

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+E+A EE+   I +E  +   +IK+ +       L     D  D  +E+   AGG E+ 
Sbjct: 76  LIEMAKEEN-SEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P  +  ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AQYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       V++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346


>gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 [Rhodococcus opacus B4]
 gi|226239092|dbj|BAH49440.1| peptide chain release factor 1 [Rhodococcus opacus B4]
          Length = 359

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/281 (40%), Positives = 158/281 (56%), Gaps = 11/281 (3%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWA 134
           L  DD S   E    L+   LE++ K    LL+     D +D  LEV +G GG ES  +A
Sbjct: 69  LAADDSSFAAEVP-ALEEQVLELD-KTLTDLLAPRDPHDGDDVVLEVKSGEGGEESALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHR 189
           + L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR
Sbjct: 127 SDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +  
Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   + D R   +  +   VLDG+LD  + A
Sbjct: 307 SERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDA 346


>gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [Mycobacterium ulcerans Agy99]
 gi|166223575|sp|A0PUL1|RF1_MYCUA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118571279|gb|ABL06030.1| peptide chain release factor 1 PrfA [Mycobacterium ulcerans Agy99]
          Length = 357

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 138/235 (58%), Gaps = 7/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D  LEV +G GG ES  +A  L RMY R+AE+  +    L     +  G + ATL I
Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYRDATLAI 162

Query: 173 --KGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             KG  A G W  +K E GVHR+ R+   +S  R HTS + + VYP  ++  E++I ESD
Sbjct: 163 ASKGDTADGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +
Sbjct: 223 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAI 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             ++    A+   +S+   +    +IR+Y   P   V D R   +  +   VLDG
Sbjct: 283 AEERAMADASADRASQIRTVDRSERIRTYNF-PENRVTDHRIGYKSHNLDQVLDG 336


>gi|56751903|ref|YP_172604.1| peptide chain release factor 1 [Synechococcus elongatus PCC 6301]
 gi|81301012|ref|YP_401220.1| peptide chain release factor 1 [Synechococcus elongatus PCC 7942]
 gi|81561678|sp|Q5N0T6|RF1_SYNP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361627|sp|Q31L36|RF1_SYNE7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56686862|dbj|BAD80084.1| peptide chain release factor RF-1 [Synechococcus elongatus PCC
           6301]
 gi|81169893|gb|ABB58233.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus
           elongatus PCC 7942]
          Length = 368

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 150/243 (61%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+AE + ++ + L    GE  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +E+ I   D  + T
Sbjct: 172 QGESVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDE-VEVSIDPKDIELTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++LQ++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +    ++++G G    +IR+Y  +  +   D R  +   S + VL+G++++ ++A
Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNRAT-DHRLGL-NFSLNPVLEGEIEEVIQA 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|289678406|ref|ZP_06499296.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 219

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 129/211 (61%), Gaps = 8/211 (3%)

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+R  + E L  ++GE  G K     ++G + YG LK E G HR+ R+   +S  R HTS
Sbjct: 1   ERRGGRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTS 60

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+
Sbjct: 61  ACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQE 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQ 321
           ERSQHKN+A+A + L AKL +   Q+    AN I    K  +G G    +IR+Y   P  
Sbjct: 121 ERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQG 176

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            V D R N+   S  +VL G +D  ++  LA
Sbjct: 177 RVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 207


>gi|299739044|ref|XP_001835016.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
 gi|298403596|gb|EAU86782.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
          Length = 345

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 146/240 (60%), Gaps = 10/240 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A LE+ +G GG+ES  +A  LLRMY R A +R +K E    +D ++ G+K   + IKG  
Sbjct: 92  ALLELKSGVGGSESSLFAGDLLRMYQRLAVQRGWKAEIAAKNDTDDGGVKDVIMEIKGVG 151

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDSIEIEISESDCRIDTY 233
           AY  L+ E GVHR+ R+   +S  R HTS  ++ V P+V   D   E      D +I+  
Sbjct: 152 AYDALRWESGVHRVQRVPATESKGRVHTSAVAVLVLPLVEENDTHGEDLFKMEDVKIEVM 211

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RA GAGGQHVN T+SAVR+THIP+G+ V  Q ERSQH+N+ +A+ +LR++L + ++ +  
Sbjct: 212 RARGAGGQHVNRTESAVRLTHIPSGITVSMQDERSQHQNRRRAFQVLRSRLLDQKIHR-- 269

Query: 294 EIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           E+A    + +  + G  R  +IR+Y   P + V D R  +  T+ S VL+G+ L+DF+ A
Sbjct: 270 EMAERRATRRNLVSGSDRSDKIRTYNF-PQERVTDHRIGLTLTNLSSVLEGEGLEDFIDA 328


>gi|257867023|ref|ZP_05646676.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257873358|ref|ZP_05653011.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257877101|ref|ZP_05656754.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325568363|ref|ZP_08144730.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
 gi|257801079|gb|EEV30009.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257807522|gb|EEV36344.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257811267|gb|EEV40087.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325158132|gb|EGC70285.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
          Length = 357

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 19/302 (6%)

Query: 56  ISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEA 112
           +  IK+ ++ L +NL   + E+A EE   S L++  D L+ RIK+ +       L     
Sbjct: 55  VEGIKDTEEMLGENLDAEMAEMAKEE--LSDLKKEKDVLEERIKILL-------LPKDPN 105

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY ++AE + +K E ++ +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAENQGWKVEVMDANVTGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E G HR+ R+   +S  R HTS +++ V P  ++ +EI+I++ D R D 
Sbjct: 166 TGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIADKDIRTDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+ ++Q+ 
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIAVAMQDERSQLKNREKAMKVLRARVYD-QMQQ- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|254412235|ref|ZP_05026010.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181201|gb|EDX76190.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
          Length = 371

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 185/339 (54%), Gaps = 13/339 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELAL 77
           Q    L  +  DP +  + +E + + + R  L+  +      K  Q+ L     +L+ A 
Sbjct: 15  QTFHELTRRLADPDIATDPVEVQRVAKARSSLEEVVITYELWKTAQEELTGARQILKEAN 74

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
            + +   +        + KLE   K+ + LL      D  +  LE+ AG GG E+  WA 
Sbjct: 75  GDGEMHEMASLEVEELQTKLEELEKRLKILLLPRDPNDDKNIMLEIRAGTGGDEASIWAG 134

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L+RMY+R+AE + ++ + L     +  G K A L I+G   Y  LK E GVHR+ R+  
Sbjct: 135 DLVRMYSRYAETQNWRVKLLSESPADMGGFKEAILEIQGEQVYSKLKFEAGVHRVQRVPV 194

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            ++  R HTS +++ V P VDD +EIE+   D  + T R+ GAGGQ+VN  ++AV + H 
Sbjct: 195 TEAGGRVHTSTATVAVMPEVDD-VEIEVDPKDLEVSTARSGGAGGQNVNKVETAVDLFHK 253

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E   +    ++++G G    +I
Sbjct: 254 PTGIRIFCTEERSQLQNRERALQILRAKLYEMKLREQQEA--VTSMRRSQVGTGSRSEKI 311

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y  +  + V D R + +  S + +L+GD++  ++A +
Sbjct: 312 RTYNYKDNR-VTDHRLS-QNYSLNSLLEGDIESVIQACI 348


>gi|168036672|ref|XP_001770830.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677889|gb|EDQ64354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 153/252 (60%), Gaps = 8/252 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   DS +  LEV AG GG E+  WA  L+RMY +++E+  ++   +   + E+ G K
Sbjct: 114 LPSDPLDSRNIMLEVRAGTGGDEAGIWAGDLVRMYQKFSERNNWRCSPVSCTEAEKGGYK 173

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              L I G   Y  LK E GVHR+ R+   +S  R HTS +++ + P VD+ +E+ I   
Sbjct: 174 EFVLEITGERVYSKLKYESGVHRVQRVPATESQGRVHTSTATVAIMPEVDE-VEVVIDPK 232

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  + T R+ GAGGQ+VN  ++A+ + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE
Sbjct: 233 DIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERSQLKNKIRAFQLLRAKLYE 292

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           ++L++++E   I  + ++++G G    +IR+Y  +  + V D RT I     + VL+G+L
Sbjct: 293 IKLREQQE--TIRNARQSQVGTGARSEKIRTYNYKDNR-VSDHRTKI-NFDLTTVLNGEL 348

Query: 344 DDFMKATLAIKK 355
           +  +++  A+++
Sbjct: 349 EGPVQSCAALEQ 360


>gi|50286945|ref|XP_445902.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525208|emb|CAG58821.1| unnamed protein product [Candida glabrata]
          Length = 405

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/241 (40%), Positives = 139/241 (57%), Gaps = 10/241 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177
           LE+  G GG+E+  +A  LL MY  +A  +K+K   + I + E  +GI  A L I  P  
Sbjct: 148 LELRPGVGGSEAMIFAKDLLNMYIGYAHNKKWKHHIVSIRENEAGSGIMDAVLAIDEPGT 207

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD------SIEIEISESDCRID 231
           Y  LK E GVHR+ RI   +S  R HTS +++ V P + D      + E      + RID
Sbjct: 208 YNILKYEAGVHRVQRIPATESKGRTHTSTAAVVVLPQLGDEGKDLDAFERSFKPEEIRID 267

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQ 290
             RASG GGQHVNTT+SAVR+THIPTG+++  Q ERSQH+NKA+A+++LR+KL ELE  Q
Sbjct: 268 VKRASGKGGQHVNTTESAVRLTHIPTGIMIHMQDERSQHRNKAKAFSILRSKLAELEQQQ 327

Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           K E+   + +   T +    +IR+Y     + + D R  +       V+ G+ LDD + A
Sbjct: 328 KAEKERQVRKEQVTTMDRSDKIRTYNFSQNR-ITDHRCGLNLYDLEGVISGERLDDVINA 386

Query: 350 T 350
            
Sbjct: 387 V 387


>gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
 gi|238690952|sp|B2HQL3|RF1_MYCMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183177395|gb|ACC42505.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
          Length = 357

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/235 (42%), Positives = 138/235 (58%), Gaps = 7/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D  LEV +G GG ES  +A  L RMY R+AE+  +    L     +  G K ATL I
Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYKDATLAI 162

Query: 173 --KGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             KG  A G W  +K E GVHR+ R+   +S  R HTS + + VYP  ++  E++I ESD
Sbjct: 163 ASKGDTADGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +
Sbjct: 223 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAI 282

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             ++    A+   +S+   +    +IR+Y   P   + D R   +  +   VLDG
Sbjct: 283 AEEQAMADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNLDQVLDG 336


>gi|71894205|ref|YP_278313.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
 gi|119361563|sp|Q4A6L9|RF1_MYCS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71850993|gb|AAZ43602.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
          Length = 359

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 143/242 (59%), Gaps = 16/242 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+   AGG E+  +A  L RMYT+W ++   K   L++      G    T  I
Sbjct: 110 DNKDVIVEIRGAAGGDEANIFAGDLYRMYTKWCQQNNMKLSTLDLSPAVSGGFTLVTFSI 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  AY  LK E GVHR+ RI   ++  R HTS +++ V P +DD IEIEI + D RID 
Sbjct: 170 QGEKAYSKLKFESGVHRVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEIKKEDLRIDV 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVRITH PTG+VV CQ+ +SQ +NK  A  +L++KLY+LELQK+
Sbjct: 230 FRSSGNGGQSVNTTDSAVRITHFPTGIVVSCQEGKSQIQNKDIAMRILKSKLYDLELQKK 289

Query: 293 E-------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +       ++A  G  S+       +IR+Y   P   V D R     TS + V++G L+ 
Sbjct: 290 QSEESGYRKLAGSGARSE-------KIRTYNY-PQDRVTDHRIGYS-TSLNYVMEGRLNP 340

Query: 346 FM 347
            +
Sbjct: 341 II 342


>gi|254424165|ref|ZP_05037883.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
 gi|196191654|gb|EDX86618.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
          Length = 367

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 151/244 (61%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLR+Y+R+AE + +K   L     +  G+K A + I
Sbjct: 112 DDKNIMLEIRAGTGGDEAGIWAGDLLRLYSRYAEGQGWKANLLSESRADMGGVKEAIVEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   +S  R HTS +++ V P VDD +EI I   +  + T
Sbjct: 172 QGNQVYSKLKFESGVHRVQRVPLTESGGRVHTSTATVAVMPEVDD-VEIHIDPKEIVMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-K 291
            R+ GAGGQ+VN  ++AV + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++LQ +
Sbjct: 231 ARSGGAGGQNVNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKLQEQ 290

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           ++EI+++    K+++G G    +IR+Y  +  + V D R N   + P+ VL+GD++  ++
Sbjct: 291 KDEISSM---RKSQVGSGSRSEKIRTYNYKDNR-VTDHRLNQNFSLPA-VLEGDIETVVQ 345

Query: 349 ATLA 352
             ++
Sbjct: 346 TCIS 349


>gi|302869596|ref|YP_003838233.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315503942|ref|YP_004082829.1| peptide chain release factor 1 [Micromonospora sp. L5]
 gi|302572455|gb|ADL48657.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315410561|gb|ADU08678.1| peptide chain release factor 1 [Micromonospora sp. L5]
          Length = 362

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/245 (38%), Positives = 141/245 (57%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  LLRMYTR+AE+  + TE ++  D +  G+K  +L I
Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERHGWVTEVIDAQDSDLGGVKDVSLAI 160

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  +D +++ I  
Sbjct: 161 KSKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAED-VDVTIDP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L 
Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARLL 279

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               ++ +  A+    ++   +    +IR+Y   P   + D R      +    L G+LD
Sbjct: 280 AAAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338

Query: 345 DFMKA 349
             + A
Sbjct: 339 GVLDA 343


>gi|186684480|ref|YP_001867676.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
 gi|238691196|sp|B2ITM5|RF1_NOSP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|186466932|gb|ACC82733.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
          Length = 365

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 185/344 (53%), Gaps = 19/344 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI-LLELALEE 79
           Q  + L  +  DP    N  E + + + R  L+  ++   EI     ++LI   E+  E 
Sbjct: 15  QTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTY-EIWKTAQEDLIGAREVYKES 73

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDW 133
                LQE + +L+  +LE + +  ES L          D  +  LE+ AG GG E+  W
Sbjct: 74  ASDPELQEMA-SLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEIRAGTGGDEASIW 132

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L++MYTR+A+ + +K   +    GE  G K   L IKG + Y  LK E GVHR+ R+
Sbjct: 133 AGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQLKFEAGVHRVQRV 192

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P VDD +EI I   D  + T R+ GAGGQ+VN  ++AV + 
Sbjct: 193 PATESGGRVHTSTATVAIMPEVDD-VEIHIDPKDIEMTTARSGGAGGQNVNKVETAVDLM 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+ + C +ERSQ +NK +A  +LRAKLY+++L   E+ A +    ++++G G   R
Sbjct: 252 HKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLG--EQQAAVTSMRRSQVGTGS--R 307

Query: 314 SYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLAI 353
           S  ++ Y   KD R    +     S + VLDGDL+  +++ +++
Sbjct: 308 SEKIRTYNY-KDNRATDHRLGQNYSLTPVLDGDLETLIQSCISL 350


>gi|332877766|ref|ZP_08445507.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684346|gb|EGJ57202.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 357

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 151/260 (58%), Gaps = 6/260 (2%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L+E+ + L +++ E++Y     +     D+ +A +E+ AG GG E+  +A  L RMYT++
Sbjct: 81  LEESKERLPQLEEEIKYM---LIPKDPEDAKNAVMEIRAGTGGDEASIFAGDLYRMYTKY 137

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            + + + T  ++ ++G   G K     + G N YG LK E GVHR+ R+   ++  R HT
Sbjct: 138 CQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGVHRVQRVPQTETQGRVHT 197

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P  ++  ++E+  +D +I    ++G GGQ VNTT SA+++ HIPTG+ V+CQ
Sbjct: 198 SAATVIVLPEAEE-FDVELDMADVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQ 256

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323
            E+SQHKN  +A  +LR++LYE+EL K+ E  +    S    G    +IR+Y   P   V
Sbjct: 257 DEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRV 315

Query: 324 KDLRTNIEKTSPSDVLDGDL 343
            D R  +      +V++GD+
Sbjct: 316 TDHRIGLTLYDLQNVINGDV 335


>gi|315038002|ref|YP_004031570.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|312276135|gb|ADQ58775.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|327183282|gb|AEA31729.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1118]
          Length = 362

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+E+A EE+   I +E  +   +IK+ +       L     D  D  +E+   AGG E+ 
Sbjct: 76  LIEMAKEEN-SEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P  +  ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       V++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346


>gi|330469860|ref|YP_004407603.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
 gi|328812831|gb|AEB47003.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
          Length = 362

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/245 (38%), Positives = 142/245 (57%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  LLRMYTR+AE+R + TE ++  D +  G+K  +L I
Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAI 160

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +  LK E GVHR+ R+   +S  R HTS + + V P  ++ +++ I  
Sbjct: 161 KTKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEE-VDVTIDP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L 
Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARLL 279

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               ++ +  A+    ++   +    +IR+Y   P   + D R      +    L G+LD
Sbjct: 280 AAAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338

Query: 345 DFMKA 349
             + A
Sbjct: 339 GVLDA 343


>gi|123969269|ref|YP_001010127.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           AS9601]
 gi|229470358|sp|A2BTA9|RF1_PROMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123199379|gb|ABM71020.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           AS9601]
          Length = 364

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/348 (34%), Positives = 186/348 (53%), Gaps = 25/348 (7%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLI 71
           A +    L  +  DP +  +  + + + RER  L+   I F K      EI+D    NL 
Sbjct: 13  ASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL- 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           L E   +++  S++ E   NL+ IK E+  K   +LL  +  D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P  D  +E++I   D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVKIDPIDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGW 308
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L++    AN  E S+  +++G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGT 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
           G   RS  ++ Y   KD RT   +     S   +L G LD+ + A +A
Sbjct: 305 GD--RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVIDACIA 349


>gi|116491555|ref|YP_811099.1| peptide chain release factor 1 [Oenococcus oeni PSU-1]
 gi|290891160|ref|ZP_06554222.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
 gi|116092280|gb|ABJ57434.1| bacterial peptide chain release factor 1 (bRF-1) [Oenococcus oeni
           PSU-1]
 gi|290479124|gb|EFD87786.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
          Length = 357

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 140/244 (57%), Gaps = 9/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+    GG E+  +A  LL MY  +A+ + +  E ++   GE  G K A + I
Sbjct: 106 DDKNIIMEIRGAVGGDEANLFAGDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE--ISESDCRI 230
            G N Y  LK E G HR+ R+   ++  R HTS +++ V P  +D I+ E  I   D R 
Sbjct: 166 SGENVYSKLKFESGAHRVQRVPVTETQGRVHTSTATVGVMPEFED-IDTEGLIDPKDVRE 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D YR+SGAGGQH+N T SAVR+ H+PTG+ V+ Q++RSQ +N+++AW +LR+++Y+   Q
Sbjct: 225 DVYRSSGAGGQHINKTSSAVRLVHLPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQ 284

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +  E     +  +T+IG G    +IR+Y   P   V D R N        V++GDL++ +
Sbjct: 285 ENRE--QYDQQRRTKIGSGDRSERIRTYNF-PQNRVTDHRINFTLNKLDKVINGDLEEII 341

Query: 348 KATL 351
            A +
Sbjct: 342 DALI 345


>gi|228472858|ref|ZP_04057615.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275440|gb|EEK14217.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
          Length = 357

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 173/313 (55%), Gaps = 13/313 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDN 91
            L +   E K LM +RQ        I E ++ + +N+   + E+A  +     L+E  + 
Sbjct: 33  QLTKEYKELKQLMDKRQEYITVTRNITEAEEIIKENIDPEMTEMARLQ-----LEEAKER 87

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L +++ E+   +F  +     DS +A +E+ AG GG E+  +A  L RMY+++ + + + 
Sbjct: 88  LPQLEEEI---KFLLIPKDPEDSKNAVMEIRAGTGGDEASIFAGDLYRMYSKYCQDKGWS 144

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +++++G   G K   L + G + YG LK E GVHR+ R+   ++  R HTS +++ V
Sbjct: 145 VSVMDMNEGTSGGFKEIILEVNGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMV 204

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  ++  ++E++  D +I    ++G GGQ VNTT SA+++ HIPTG+ V+CQ E+SQHK
Sbjct: 205 LPEAEE-FDVELNMEDVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQDEKSQHK 263

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNI 330
           N  +A  +LR++LYE+EL K+ E  +    S    G    +IR+Y   P   V D R  +
Sbjct: 264 NLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGL 322

Query: 331 EKTSPSDVLDGDL 343
                 ++++GD+
Sbjct: 323 TLYDLGNIMNGDI 335


>gi|167041537|gb|ABZ06286.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_008B14]
          Length = 360

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 182/347 (52%), Gaps = 14/347 (4%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +  +FD  D  + R + +      P +  +  + + L RER  L+  +      + +L D
Sbjct: 1   MPSIFDKLDPVLTRYNEIEEAMGRPEVATDFEQVQTLARERASLETLVDIAHRYR-KLAD 59

Query: 69  NLILLELALEED-DCSILQETSDNLQRIKLEVEYKQFE---SLLSGEA-DSNDAYLEVHA 123
               L   L+E  D  + +   D L   + +VE    E   +LL  +  D  D  +E+ +
Sbjct: 60  EQGDLNALLQEGGDAELTKMAKDELDETEKQVEQLAEELKIALLPKDPNDDRDVIVEIRS 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  +A+ L R YTR+A+   ++ + ++ +  +  G+      I+G  A+  LK 
Sbjct: 120 GAGGNEASLFASDLYRAYTRYAQLHHWQVDVMDSNPSDLGGLNKIVFGIQGKGAFSRLKY 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHR+ R+   ++  R HTS +++ V    D+ ++I+IS  D RID + A G GGQ+V
Sbjct: 180 ERGVHRVQRVPDTEAQGRIHTSTATVAVLARADE-VDIKISPDDLRIDIFHAGGHGGQNV 238

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   +AVRI + PTG+ V CQ ERSQ+KNK +A  MLRAKLY+ E +K    A   E+ +
Sbjct: 239 NKVATAVRIVYEPTGLTVICQDERSQYKNKTKAMAMLRAKLYDAEQEKI--AAERSETRR 296

Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +++G      +IR+Y   P   + D R          ++DG+LDD +
Sbjct: 297 SQVGNADRSEKIRTYNY-PQDRITDHRVGASFHGIPRIMDGELDDLI 342


>gi|291298828|ref|YP_003510106.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568048|gb|ADD41013.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
          Length = 367

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/334 (34%), Positives = 170/334 (50%), Gaps = 12/334 (3%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
           S L  +  DP +  +   A+ + R    L    +   E+ D + ++L   E  L  DD  
Sbjct: 18  SELEKQLADPSIHADAALARRVGRRYAELSPIAACNAEL-DTVKEDLAAAE-ELAGDDPE 75

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E +   +RI    E      L     DS D  +E+ AG GG ES  +A  LLRMY R
Sbjct: 76  FAAEATALRERIPQLEEKLAELLLPRDPDDSRDVIIEIKAGEGGAESALFAADLLRMYLR 135

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISPY 196
           +AEK  +  E ++  + E  G+K  ++ +K       G   +  +K E GVHR+ R+   
Sbjct: 136 YAEKHGWVAEIMDSQESEMGGVKDVSVAVKTKGNPEGGHGVWSRMKFEGGVHRVQRVPVT 195

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS + + V P  ++ +++EI+  + RID YR+SG GGQ VNTTDSAVRITHIP
Sbjct: 196 ESQGRIHTSAAGVLVMPEAEE-VDVEINMHELRIDVYRSSGPGGQSVNTTDSAVRITHIP 254

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSY 315
           TGVV  CQ E+SQ +NK  A  +LRA+L   + ++ E  A     S+   +    ++R+Y
Sbjct: 255 TGVVASCQNEKSQLQNKEAAMRILRARLLAAKQEEAEAAAGAARKSQVRTVDRSERVRTY 314

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              P   V D R      +   V+ GD+D  + A
Sbjct: 315 NF-PQNRVTDHRIGYTSHNLDQVMQGDMDGVLDA 347


>gi|295425486|ref|ZP_06818179.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
 gi|295064825|gb|EFG55740.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
          Length = 362

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 140/243 (57%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE++ +K   ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAERQGWKVSMVDSEPTEVGGYKRVAIMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I++   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYETQN 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R++        K  +G G    +IR+Y   P   V D R  +       V++G+LD+ + 
Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIID 343

Query: 349 ATL 351
           A +
Sbjct: 344 ALI 346


>gi|116248645|gb|ABJ90461.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis]
          Length = 158

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 77/153 (50%), Positives = 108/153 (70%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R+   +S 
Sbjct: 1   MYSRYAEDKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQRVPETESQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R+THIPTGV
Sbjct: 61  GRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGV 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           VV+CQ +RSQHKN+A+A ++L A+L + E +KR
Sbjct: 121 VVECQDQRSQHKNRAKAMSVLAARLQQAEDEKR 153


>gi|295397091|ref|ZP_06807203.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
 gi|294974683|gb|EFG50398.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
          Length = 357

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/307 (35%), Positives = 169/307 (55%), Gaps = 19/307 (6%)

Query: 51  HLDNAISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
           H  + I  I++ ++ L ++    + ELA EE     L+E     +R  LE E K+   + 
Sbjct: 51  HYKDVIQAIEDTEELLAESSDDEMTELAKEE-----LKEL--KAERESLEEEIKRL-MIP 102

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S   D  +  +E+   AGG E+Q +A  L  MY+R+A  + ++ E +E    +  G K  
Sbjct: 103 SDPNDDKNIIMEIRGAAGGDEAQLFAGDLYEMYSRYATSQGWRVEVIESSSNDIGGFKEI 162

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           TL I+G   Y  LK E G HR+ R+   +S  R HTS +++ V P ++D I+ ++ E D 
Sbjct: 163 TLQIQGDKVYSKLKFESGAHRVQRVPDTESQGRVHTSTATVGVMPELED-IDFDLDEGDI 221

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-L 287
           RID YRASGAGGQHVN T SAVR+TH PTG+ V  Q +RSQ +NK +A  +LR+++YE +
Sbjct: 222 RIDIYRASGAGGQHVNKTSSAVRLTHEPTGIQVAMQDQRSQQQNKDKAMMILRSRVYEKI 281

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             +++ E  +     K  +G G    +IR+Y   P   V D R  +       ++ G+LD
Sbjct: 282 ASEQQNEYDS---QRKNLVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDRIMTGELD 337

Query: 345 DFMKATL 351
           + + A L
Sbjct: 338 EIVDALL 344


>gi|328957995|ref|YP_004375381.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
 gi|328674319|gb|AEB30365.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
          Length = 358

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/244 (37%), Positives = 138/244 (56%), Gaps = 7/244 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +  +E+   AGG E+Q +A  L  MY ++A+ + ++TE L+ +     G K  TL
Sbjct: 104 ENDDRNIIMEIRGAAGGDEAQLFAGTLFNMYQKYADAQGWRTEVLDANITGIGGYKEITL 163

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           +I G N Y  LK E G HR+ R+   +S  R HTS +++ V P  ++ +E+ + + D R 
Sbjct: 164 MITGDNVYSKLKYENGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VELNLPDKDIRT 222

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D Y ASGAGGQHVN T SAVR+TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+   Q
Sbjct: 223 DIYHASGAGGQHVNKTASAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQ 282

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             +  +      K+ +G G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 283 AAQ--SEYDAERKSAVGTGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEII 339

Query: 348 KATL 351
            A +
Sbjct: 340 DALI 343


>gi|227892680|ref|ZP_04010485.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
 gi|227865551|gb|EEJ72972.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
          Length = 362

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 88/242 (36%), Positives = 138/242 (57%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE++ +K   ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I+I   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A      K  +G G    +IR+Y   P   V D R  +       V++G+LD+ + A
Sbjct: 288 Q--AKYDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDA 344

Query: 350 TL 351
            +
Sbjct: 345 LI 346


>gi|259046347|ref|ZP_05736748.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
 gi|259036984|gb|EEW38239.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
          Length = 359

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 184/347 (53%), Gaps = 12/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  D+ + R   L+    DP +  +      L +E  +L   +   K  Q   + + D
Sbjct: 1   MFDQLDSFIIRYDELSELLSDPEVIGDTKRFMELTKEEANLRPKVETFKRYQQVVEEISD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +L  +L+ +   + +E   +L++ K+E+E K +F  L     D  +  +E+   AGG
Sbjct: 61  TEEMLGESLDAEMAEMAKEELSSLKKEKVELEDKIKFLLLPEDPNDGKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LL MY ++AE + ++ E ++ +     G K   L+I G N +  LK E G 
Sbjct: 121 DEAALFAGDLLTMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  +  +EIE+ + D R+D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAE-EVEIELEDKDIRVDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+   Q  E  +    + K+ +G
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ--EAQSEYDANRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VL G +D+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343


>gi|315641825|ref|ZP_07896829.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
 gi|315482500|gb|EFU73039.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
          Length = 357

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 140/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L  MY R+AE + ++ E ++ +     G K   ++I
Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQRYAESQGWRVEVMDANITGIGGYKEVIMMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E G HR+ R+   +S  R HTS +++ V P  ++ +E+++++ D R+D 
Sbjct: 166 TGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VELDLADKDIRVDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+ +LQ  
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QLQ-H 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       +L G LD+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341


>gi|298491428|ref|YP_003721605.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
 gi|298233346|gb|ADI64482.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
          Length = 364

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 145/243 (59%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+A+ + +K + +    GE  G K   L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWKVKLVSQSLGEMGGFKEVILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   +S  R HTS ++I + P VDD +EI I   D  + T
Sbjct: 172 QGDRVYSKLKFEAGVHRVQRVPATESGGRVHTSTATIAIMPEVDD-VEIHIDPKDIEMST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++A  + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +    ++++G G    +IR+Y  +  ++      N    +P  VL+GDL+  +++
Sbjct: 291 QEA--VTSMRRSQVGTGSRSEKIRTYNYKDSRVTDHRLGNNFTLNP--VLEGDLETIVQS 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|255559292|ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
 gi|223540051|gb|EEF41628.1| peptide chain release factor, putative [Ricinus communis]
          Length = 370

 Score =  162 bits (409), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 178/341 (52%), Gaps = 31/341 (9%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+ K  DP +  N  E + L +    LD  +S  +  +D  C      E  LEE      
Sbjct: 22  LSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKD--C------EKQLEETKALAK 73

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA-------------DSNDAYLEVHAGAGGTESQD 132
           +E +D      + +E     + L G               D+ +  LEV AG GG E+  
Sbjct: 74  EEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGL 133

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  L+RMY ++ E+  +K   +   + E+ G K+  + +KG   Y  LK E GVHR+ R
Sbjct: 134 WAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKYESGVHRVQR 193

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ + P  D+ +E+ I   D  + T R+ GAGGQ+VN  ++AV +
Sbjct: 194 VPQTETQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAVDL 252

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+ + C +ER+Q +NK +A  +LRAKLYE+++++++E  +I    K ++G G   
Sbjct: 253 FHKPTGIRIFCTEERTQLQNKTRALQLLRAKLYEMKVREQQE--SIRNQRKLQVGTGARA 310

Query: 310 RQIRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKA 349
            +IR+Y  +  ++    L+ N E TS    L GD+++ ++A
Sbjct: 311 EKIRTYNYKDNRVTDHRLKMNFELTS---FLQGDIENAVQA 348


>gi|209554361|ref|YP_002284416.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|238054476|sp|B5ZAH6|RF1_UREU1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209541862|gb|ACI60091.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
          Length = 359

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 137/243 (56%), Gaps = 10/243 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG ES  +   L   Y  + E   +K + +E+      G    + +I
Sbjct: 110 DDKNVIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNA-VGFSFISFMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D +++ I+ SD RIDT
Sbjct: 169 SGEEVYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLPE-QDEVDVVINPSDLRIDT 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YRASGAGGQHVN T+SAVRITHIPTGVV  CQ+ +SQ +N+  A  MLRAKL+E  + Q+
Sbjct: 228 YRASGAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQ 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             E AN+    K ++G G    +IR+Y   P   V D R ++       ++ G+LD+ + 
Sbjct: 288 NAEFANL---RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIID 343

Query: 349 ATL 351
           A +
Sbjct: 344 ALI 346


>gi|162447071|ref|YP_001620203.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
 gi|226739094|sp|A9NEP7|RF1_ACHLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161985178|gb|ABX80827.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
          Length = 354

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 7/235 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E   +A  L +MY+++AE   +K   +    G   G      +I
Sbjct: 104 DDKNVIIEIKGAAGGDEGNIFAGDLFKMYSKYAESMGWKVTLVNTTPGSSGGFAGIEFII 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NA+ +LK E GVHR+ R+   +S  R HTS + +   P  +D IE ++   D R DT
Sbjct: 164 SGENAFSYLKHESGVHRVQRVPETESQGRIHTSTAVVLALPEQED-IEYDVKWEDIRFDT 222

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y +SGAGGQ VNTT SAVR+THIPT VVV  Q+ERSQH NK +A+ +L  ++Y+ ++Q+ 
Sbjct: 223 YNSSGAGGQSVNTTYSAVRLTHIPTNVVVTSQEERSQHANKDRAYKLLVTRIYD-KIQQ- 280

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           E++   GES K  IG G    +IR+Y   P   V D R  +       +++G +D
Sbjct: 281 EQLEKEGESRKALIGRGNRSEKIRTYNY-PQNRVTDHRIGLTINRLDAIMEGRID 334


>gi|116326889|ref|YP_796609.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329879|ref|YP_799597.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122282347|sp|Q04W81|RF1_LEPBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122285261|sp|Q056R9|RF1_LEPBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116119633|gb|ABJ77676.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123568|gb|ABJ74839.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 354

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/234 (40%), Positives = 140/234 (59%), Gaps = 7/234 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +   L RMY+++A+K+K K+E ++       G+K     ++   AY
Sbjct: 109 VEIRAGTGGEEAGLFVADLFRMYSKFADKQKIKSEIIDSAPTGIGGLKEIIFALEDERAY 168

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
              K E G HR+ RI   +S  R HTS  ++ V P  D+      +E+D RID YR+SGA
Sbjct: 169 DLFKFEGGTHRVQRIPSTESGGRIHTSAVTVAVLPEADEEEIEI-NENDLRIDVYRSSGA 227

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITHIPTGVVV CQ E+SQHKNKA+A  +L A++ E + + +++ ++ 
Sbjct: 228 GGQHVNTTDSAVRITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQTEDKKQASDA 287

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               K  IG G    ++R+Y   P     D R      + S +++GDL++ + A
Sbjct: 288 --IKKQMIGSGDRSERVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLEELIGA 338


>gi|328788515|ref|XP_001119866.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Apis mellifera]
          Length = 354

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 6/200 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+  G GG E+  +A  LL MY ++     F  E LEI   E  G++ AT+LI   NA+
Sbjct: 100 MEIVPGVGGQEAMLFAKDLLNMYIKYFNHIGFNYEILEILSNELNGLRKATVLISDNNAF 159

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ RI   + + R HTS + + + P   D ++I++ + D  I++ +ASGA
Sbjct: 160 KKLKYEGGVHRVQRIPATEKSGRLHTSTAVVTILPEPKD-VDIKLEDKDLIIESKKASGA 218

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSA+RITHIPTG +V CQ  RSQ KNK  A   L++ LYE EL K  +++ I
Sbjct: 219 GGQHVNTTDSAIRITHIPTGTIVTCQTNRSQIKNKQIALTKLKSLLYEEELNK--QVSFI 276

Query: 299 GESSKTEIG---WGRQIRSY 315
            +  K +IG      +IR+Y
Sbjct: 277 NQIRKKQIGKRLRNEKIRTY 296


>gi|333029894|ref|ZP_08457955.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
 gi|332740491|gb|EGJ70973.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
          Length = 361

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 136/241 (56%), Gaps = 17/241 (7%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+ AG GG E+  +A  L RMY+++ E + +  E    ++G   G K     +
Sbjct: 111 DERNAIMEIRAGTGGDEAALFAGDLFRMYSKYCENKGWTVEINNFNEGTAGGFKEIVFSV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   +S  R HTS  ++ V P  ++ +++E++ +D  + T
Sbjct: 171 SGDNVYGILKYESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVELNPADIELQT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291
            R+ GAGGQHVN  ++ V +TH PTG+VV CQ+ RSQH N+ +A  +LR+KLYE+E +K 
Sbjct: 230 ARSGGAGGQHVNKVETKVMLTHKPTGLVVICQEGRSQHSNREKAMQILRSKLYEIEYEKA 289

Query: 292 -------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                  R+ + + G+ S        +IR+Y   P   + D R N    +    +DGD+ 
Sbjct: 290 NKERSEQRKSLVSTGDRSA-------KIRTYNY-PQGRITDHRINYTIYNLQAFMDGDIQ 341

Query: 345 D 345
           D
Sbjct: 342 D 342


>gi|78780006|ref|YP_398118.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9312]
 gi|119361576|sp|Q318L3|RF1_PROM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78713505|gb|ABB50682.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 364

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 187/348 (53%), Gaps = 25/348 (7%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLI 71
           A +    L  +  DP +  +  + + + RER  L+   I F K      EI+D    NL 
Sbjct: 13  ASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL- 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           L E   +++  S++ E   NL+  K ++  K   +LL  +  D     LE+ AGAGG+E+
Sbjct: 70  LKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAGGSEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P  D  +E++I  +D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGW 308
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L++    AN  E S+  +++G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGT 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
           G   RS  ++ Y   KD RT   +     S   +L G LD+ + A +A
Sbjct: 305 GD--RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVIDACIA 349


>gi|58337080|ref|YP_193665.1| peptide chain release factor 1 [Lactobacillus acidophilus NCFM]
 gi|227903648|ref|ZP_04021453.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
 gi|75432974|sp|Q5FKZ0|RF1_LACAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58254397|gb|AAV42634.1| peptide chain release factor I [Lactobacillus acidophilus NCFM]
 gi|227868535|gb|EEJ75956.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
          Length = 361

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE++ +    ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I+I   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A      K  +G G    +IR+Y   P   V D R  +       V++G+LD+ + A
Sbjct: 288 Q--AQYDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIIDA 344

Query: 350 TL 351
            +
Sbjct: 345 LI 346


>gi|282898327|ref|ZP_06306318.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
 gi|281196858|gb|EFA71763.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
          Length = 364

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 147/244 (60%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+A+ + +K + +    GE  G K   L I
Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWKVKLVSESPGEMGGFKEVILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +E+ I   D  + T
Sbjct: 172 QGNSVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDD-VEVHIDPKDIEMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348
           +E   +    ++++G G   RS  ++ Y   KD R    +     + S VL+GDL+  ++
Sbjct: 291 QEA--VTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFTLSPVLEGDLEILIQ 345

Query: 349 ATLA 352
           + ++
Sbjct: 346 SCIS 349


>gi|157414134|ref|YP_001485000.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9215]
 gi|238686831|sp|A8G733|RF1_PROM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157388709|gb|ABV51414.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9215]
          Length = 364

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 189/346 (54%), Gaps = 27/346 (7%)

Query: 23  LSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLILL 73
           +SF N + +  DP +  +  + + + RER  L+   I F K      EI+D    NL L 
Sbjct: 15  VSFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL-LK 71

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132
           E   +++  S++ E    L+  K E+  K   +LL  +  D     LE+ AGAGG+E+  
Sbjct: 72  ENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGSEACI 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  L RMY R+ +K  +  +++   + +  G K   + +KG + Y  LK E GVHR+ R
Sbjct: 132 WAGDLARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P  D  +E++I  +D  I T R+ GAGGQ+VN  ++A+ +
Sbjct: 192 VPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDL 250

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGWGR 310
            H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L++    AN  E S+  +++G G 
Sbjct: 251 LHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGTGD 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
             RS  ++ Y   KD RT   +     S   +L G LD+ + A +A
Sbjct: 307 --RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVINACIA 349


>gi|218459801|ref|ZP_03499892.1| peptide chain release factor 1 [Rhizobium etli Kim 5]
          Length = 230

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 135/219 (61%), Gaps = 8/219 (3%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ R+   
Sbjct: 3   LFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPET 62

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P  ++ I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH+P
Sbjct: 63  EAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLP 121

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VV    E+SQH+N+A+A  +LR++LY+ E Q+ +  +      K+++G G    +IR
Sbjct: 122 SGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQRAD--SERSADRKSQVGSGDRSERIR 178

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+       +++G++++ + A +A
Sbjct: 179 TYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 216


>gi|294659861|ref|XP_002770657.1| DEHA2G17204p [Debaryomyces hansenii CBS767]
 gi|199434289|emb|CAR65990.1| DEHA2G17204p [Debaryomyces hansenii]
          Length = 411

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/256 (40%), Positives = 144/256 (56%), Gaps = 17/256 (6%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLS 109
           LDN   +  EI++       LLE+  EE+D  ++ E S+ L+ +  +V    K  +S L 
Sbjct: 87  LDNYHKYQHEIENLQS----LLEILHEEEDAEMVHEASNELKEVIPKVFNFTKVLQSRLL 142

Query: 110 GEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
                +D  A LE+  G GG+E+  +A  LL MY  +A   K+K   +    G    +  
Sbjct: 143 PPVTHSDRPAMLELRPGVGGSEAALFAGDLLNMYINFANHMKWKWTMISESHGNNGSVNE 202

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-- 225
           A + I  P AY  L+ E GVHR+ RI   ++  R HTS +++ V P + +  E  + +  
Sbjct: 203 AIISIDNPGAYSILRHESGVHRVQRIPSTETKGRIHTSTAAVVVLPKMSEGTESSLKDDE 262

Query: 226 -----SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
                 + RIDT RA G GGQHVNTTDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++L
Sbjct: 263 RQFQPGEVRIDTMRAGGKGGQHVNTTDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSIL 322

Query: 281 RAKLYELELQKREEIA 296
           RA+L  LE  K  EIA
Sbjct: 323 RARLAALERDK--EIA 336


>gi|282899982|ref|ZP_06307943.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195252|gb|EFA70188.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 364

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 147/244 (60%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+A+ + ++ + +    GE  G K   L I
Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESPGEMGGFKEVILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +E+ I   D  + T
Sbjct: 172 QGDSVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDD-VEVHIDPKDIEMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348
           +E   +    ++++G G   RS  ++ Y   KD R    +     + S VL+GDL+  ++
Sbjct: 291 QEA--VTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFTLSPVLEGDLETLIQ 345

Query: 349 ATLA 352
           + ++
Sbjct: 346 SCIS 349


>gi|116629883|ref|YP_815055.1| peptide chain release factor 1 [Lactobacillus gasseri ATCC 33323]
 gi|238853674|ref|ZP_04644042.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282851601|ref|ZP_06260966.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311110481|ref|ZP_07711878.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
 gi|122273179|sp|Q042K5|RF1_LACGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116095465|gb|ABJ60617.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833712|gb|EEQ25981.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282557569|gb|EFB63166.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311065635|gb|EFQ45975.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
          Length = 362

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADS 114
           S IKEI D    N  ++    ++D   + +E +  L++   KLE E K    L     D 
Sbjct: 56  SDIKEIDD----NKEIISSESDDDLVEMAKEENSELEKEVAKLEDEIKIL-MLPKDPNDD 110

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D  +E+   AGG E+  +A  LLRMY ++AE + +K   ++    E  G K   ++I G
Sbjct: 111 KDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITG 170

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
              Y  LK E G HR+ R+   +S  R HTS +++ V P  +  ++I++   D R+D YR
Sbjct: 171 DKVYSKLKYENGAHRVQRVPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDVYR 229

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKRE 293
           +SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q R+
Sbjct: 230 SSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD 289

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +        K  +G G    +IR+Y   P   V D R  +       V++G+LD+ + A
Sbjct: 290 K---YDAKRKDAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINA 344


>gi|332687009|ref|YP_004456783.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
 gi|332371018|dbj|BAK21974.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
          Length = 358

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/331 (34%), Positives = 180/331 (54%), Gaps = 26/331 (7%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI--LLELALEEDDC 82
           FL    E+ +L + V   ++  R +Q     I  IK+ ++ L ++L   +LE+A EE   
Sbjct: 31  FLKLSKEEANLRETV---EVYRRYKQ----VIQGIKDTEELLGESLESEMLEMAKEE--L 81

Query: 83  SILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
           S L++  + L  RIK+ +       L     D  +  +E+   AGG E+  +A  L  MY
Sbjct: 82  SELKQEKEVLGDRIKILL-------LPKDPNDDKNIIMEIRGAAGGDEAALFAGNLFSMY 134

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            ++AE + +K E ++ +     G K   ++I G N +  LK E G HR+ R+   +S  R
Sbjct: 135 QKYAELQGWKIEVMDANITGIGGYKEVIMMITGENVFSKLKYESGAHRVQRVPSTESQGR 194

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P  ++ +EI++ + D R D Y ASGAGGQH+N T SAVR+TH+PTG+VV
Sbjct: 195 IHTSTATVVVMPEAEE-VEIDLEDKDIRTDIYHASGAGGQHINKTASAVRLTHLPTGIVV 253

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
             Q ERSQ KN+ +A  +LR ++Y+ +LQ+  + A   +  K+ +G G    +IR+Y   
Sbjct: 254 AMQDERSQLKNREKAMKILRTRVYD-QLQQEAQSAYDAD-RKSAVGTGDRSERIRTYNF- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           P   V D R  +       VL G LD+ + A
Sbjct: 311 PQNRVTDHRIGLTLQKLDQVLSGKLDEIIDA 341


>gi|171911189|ref|ZP_02926659.1| peptide chain release factor 1 [Verrucomicrobium spinosum DSM 4136]
          Length = 358

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 177/335 (52%), Gaps = 16/335 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALE 78
           R S L      P+ + +  +A  L+RE + L+  +    E Q    ++ DN    ELA  
Sbjct: 13  RFSELEEMMGHPNFYDDNRKAGDLLREHRSLEALVKAWSEYQRTEQQIADNQ---ELAKS 69

Query: 79  EDDCSILQETS--DNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135
            D             LQ   LE+E +    +L  +  +  D  +E+ AG GG E+  +A 
Sbjct: 70  GDAELAALAEEELPTLQARLLELEGEVQRHILPPDPLEGRDVIMEIRAGTGGDEAAIFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY R+AE+R +K E++E    +  G K     + G + +  LK E GVHR+ R+  
Sbjct: 130 DLYRMYNRYAEERGWKIESMEASPSDAGGYKEVVFKVSGEDVFRTLKYESGVHRVQRVPA 189

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            ++  R HTS +++ V P  ++ +++++   + RI+  RASG GGQ VNTTDSAV++ H+
Sbjct: 190 TEAQGRIHTSAATVAVLPEAEE-VDLQLKPDELRIEVCRASGHGGQGVNTTDSAVQVMHL 248

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG++V+CQ  RSQ KNK +A  ++R++L  LE +++EE A      K  IG G    +I
Sbjct: 249 PTGMIVRCQDGRSQLKNKEKAITIMRSRL--LEKKQQEEAAKYSAHRKALIGGGGREEKI 306

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           R+Y   P   + D R ++   +    +DG + D +
Sbjct: 307 RTYNY-PQNRITDHRIDVTLYNLDMFVDGRIGDLV 340


>gi|284992528|ref|YP_003411082.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
 gi|284065773|gb|ADB76711.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
          Length = 363

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 175/338 (51%), Gaps = 28/338 (8%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+  DP +  +   A+ L R    L   +   K   D + D+L      L ++D S  
Sbjct: 26  LETELADPAVHADASRARRLGRRYAQLAPLVE-TKRALDAVRDDLAAAR-ELADEDASFA 83

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            E +   QR+  E+E ++  SLL  E   D  D  LE+ AG GG ES  +A  LLRMY R
Sbjct: 84  AEAAALEQRVP-ELE-ERLRSLLVPEDPDDDKDVILEIKAGEGGAESALFAGDLLRMYLR 141

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG-W--LKGEQGVHRLVRISPYDSNS 200
           +AE+R + TE L+    +  G K   + +K  +  G W  LK E GVHR+ R+   +S  
Sbjct: 142 YAERRGWATEVLDAVPADLGGYKDVAIAVKSRSDEGIWSRLKFEGGVHRVQRVPVTESQG 201

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS   + V P  ++ +++ +  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+V
Sbjct: 202 RIHTSAVGVLVLPEAEE-VDVTVDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 260

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELEL---------QKREEIANIGESSKTEIGWGRQ 311
           V  Q E+SQ +N+  A  +LR++L              Q+R ++  +  S +        
Sbjct: 261 VSSQNEKSQLQNRESALRVLRSRLLAAARDEAAAAASDQRRSQVRTVDRSER-------- 312

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +R+Y   P   + D R   +  +   VLDG+LD  + A
Sbjct: 313 VRTYNF-PESRISDHRVGFKAHNLDQVLDGELDPVIDA 349


>gi|296128915|ref|YP_003636165.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
 gi|296020730|gb|ADG73966.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
          Length = 392

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/247 (40%), Positives = 146/247 (59%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LE+ AG GG ES  +A  LLRMYTR+AE++ +  + L+  + +  G+K A + +
Sbjct: 131 DGRDVILEIKAGEGGEESALFAGDLLRMYTRYAERQGWSVQVLDATESDLGGVKDAQVAV 190

Query: 173 K----GPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K    GP   G W  LK E GVHR+ R+   +S  R HTS + + V+P  DD  +++I +
Sbjct: 191 KARAAGPPEDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVMVFPEADDDGDVDIDQ 250

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L 
Sbjct: 251 NDLRIDVYRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLL 310

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               ++    A+    S+   +    +IR+Y   P   + D RT  +  +   VLDGDL 
Sbjct: 311 AARQEEAAAAASEARRSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLDGDLG 369

Query: 345 DFMKATL 351
             + + +
Sbjct: 370 PVIASAV 376


>gi|170114318|ref|XP_001888356.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636668|gb|EDR00961.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 338

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/253 (39%), Positives = 147/253 (58%), Gaps = 8/253 (3%)

Query: 104 FESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           F SLL   + ++   A +E+ +G GG+ES  +   LLRMY R A   ++K + +  +D +
Sbjct: 70  FPSLLVPPSTTSHLSALMEMKSGVGGSESSLFLGDLLRMYQRLANVNRWKAQVVAQNDND 129

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDS 218
             G K A + IKG  AY  L+ E GVHR+ R+   +S+ R HTS  SI V P+V   D  
Sbjct: 130 GGGTKDAIIEIKGDGAYDALRFESGVHRVQRVPATESSGRVHTSTVSIVVLPLVEETDTQ 189

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            E   S SD +++  RA GAGGQHVN T+SAVR+THIPTG+ V  Q ERSQH+N+ +A+ 
Sbjct: 190 AEELFSMSDIKLEVMRARGAGGQHVNKTESAVRLTHIPTGITVSMQDERSQHQNRRRAFQ 249

Query: 279 MLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +LR++L + +L +  EE  +   +         +IR+Y     + V D R  +   + S 
Sbjct: 250 VLRSRLLDKKLTREMEERRDTRRNLVRGADRSEKIRTYNF-VQERVTDHRIGLTLMNLSS 308

Query: 338 VLDGD-LDDFMKA 349
           VL+GD + DF+ A
Sbjct: 309 VLEGDGIQDFIDA 321


>gi|254526537|ref|ZP_05138589.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537961|gb|EEE40414.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
          Length = 364

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 188/346 (54%), Gaps = 27/346 (7%)

Query: 23  LSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLILL 73
           +SF N + +  DP +  +  + + + RER  L+   I F K      EI+D    NL L 
Sbjct: 15  VSFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL-LK 71

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132
           E   +++  S++ E    L+  K E+  K   +LL  +  D     LE+ AGAGG E+  
Sbjct: 72  ENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEACI 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  L RMY R+ +K  +  +++   + +  G K   + +KG + Y  LK E GVHR+ R
Sbjct: 132 WAGDLARMYERYGQKIGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P  D  +E++I  +D  I T R+ GAGGQ+VN  ++A+ +
Sbjct: 192 VPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDL 250

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGWGR 310
            H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L++    AN  E S+  +++G G 
Sbjct: 251 LHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGTGD 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
             RS  ++ Y   KD RT   +     S   +L G LD+ + A +A
Sbjct: 307 --RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVINACIA 349


>gi|226226590|ref|YP_002760696.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
 gi|226089781|dbj|BAH38226.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
          Length = 356

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D   A +E+ AG GG E+  +A  LLRMYTR+ E+R ++ E +   +G   G+K +   +
Sbjct: 109 DERPAIVEIRAGTGGDEAGLFAGDLLRMYTRFLERRGWRIEPISYSEGTLGGVKESVFKV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   +G L+ E GVHR+ R+   +S  R HTS +++ V P  ++ +++ I + D RID 
Sbjct: 169 SGDGVFGVLRWESGVHRVQRVPATESQGRIHTSAATVAVLPEAEE-LDMRIEDKDLRIDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG GGQ VNTTDSAVRITHIPTG+VV  Q ++SQ +NKA+A ++LRA+L +L L ++
Sbjct: 228 FRSSGPGGQSVNTTDSAVRITHIPTGIVVSQQDQKSQLQNKAKAMDVLRARLLDLRLSEQ 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  A      K+++  G    +IR+Y   P   V D R  +       V++G++  F+ A
Sbjct: 288 E--AERSRMRKSQVSTGDRSAKIRTYNF-PQGRVTDHRVGLTLYDIDSVMNGEISSFLDA 344


>gi|326335566|ref|ZP_08201753.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692332|gb|EGD34284.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 366

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 151/260 (58%), Gaps = 6/260 (2%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L+E  + L +++ E+   +F  +     DS +A +E+ AG GG E+  +A  L RMY+++
Sbjct: 90  LEEAKERLPQLEEEI---KFLLIPKDPEDSKNAVMEIRAGTGGDEASIFAGDLYRMYSKY 146

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            + + +    +++++G   G K   L I G + YG LK E GVHR+ R+   ++  R HT
Sbjct: 147 CQDKGWSVSVMDMNEGTSGGFKEIILEINGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 206

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P  ++  ++E++  D +I    ++G GGQ VNTT SA+++ HIPTG+ V+CQ
Sbjct: 207 SAATVIVLPEAEE-FDVELNMEDVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQ 265

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323
            E+SQHKN  +A  +LR++LYE+EL K+ E  +    S    G    +IR+Y   P   V
Sbjct: 266 DEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRV 324

Query: 324 KDLRTNIEKTSPSDVLDGDL 343
            D R  +      ++++GD+
Sbjct: 325 TDHRIGLTLYDLGNIINGDI 344


>gi|195031191|ref|XP_001988305.1| GH11092 [Drosophila grimshawi]
 gi|193904305|gb|EDW03172.1| GH11092 [Drosophila grimshawi]
          Length = 395

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/247 (38%), Positives = 142/247 (57%), Gaps = 6/247 (2%)

Query: 74  ELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTE 129
           ELA E+D+   +++QE ++    +  + E    + LL+     D      EV AGAGG E
Sbjct: 84  ELAAEKDEDMRALMQEENNVYADLLRKQEEDMLQELLTLADNVDYPALIFEVKAGAGGQE 143

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L  MYT + E   ++ E       +  G++ A LL+  P AY WL+ E GVHR
Sbjct: 144 AMLFAQELYDMYTSYFEHMGWEYEEFAYETTDIGGLRHANLLVSDPEAYNWLRYEAGVHR 203

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   + + R HTS +SI V P   D + + +++ D +I+T RASGAGGQHVNTTDSA
Sbjct: 204 VQRVPTTEKSGRMHTSTASITVIPRPAD-VHVHLTDRDLKIETKRASGAGGQHVNTTDSA 262

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIGW 308
           VRI H+PTG+ V+CQ ERSQ KN+  A   L+AKL + +L+  E       +S +  +  
Sbjct: 263 VRIVHLPTGLAVECQSERSQLKNRELALKRLQAKLMQQQLESAEASKQATRKSQQGNLNR 322

Query: 309 GRQIRSY 315
             +IR+Y
Sbjct: 323 NEKIRTY 329


>gi|309803264|ref|ZP_07697361.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|309805669|ref|ZP_07699710.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|309806347|ref|ZP_07700360.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|309809934|ref|ZP_07703782.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871919|ref|ZP_07732001.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|312873839|ref|ZP_07733882.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|329921112|ref|ZP_08277635.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
 gi|308164772|gb|EFO67022.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|308165029|gb|EFO67271.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|308167331|gb|EFO69497.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|308169722|gb|EFO71767.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|311090621|gb|EFQ49022.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|311092496|gb|EFQ50858.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|328935019|gb|EGG31508.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
          Length = 362

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + ++   ++  + E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  +++++   D R+D 
Sbjct: 169 SGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A+     K  +G G    +IR+Y   P   V D R  +       +++G+L+D + A
Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344

Query: 350 TL 351
            +
Sbjct: 345 LV 346


>gi|259501685|ref|ZP_05744587.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|302191107|ref|ZP_07267361.1| peptide chain release factor 1 [Lactobacillus iners AB-1]
 gi|309808088|ref|ZP_07702006.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|312874655|ref|ZP_07734679.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315653748|ref|ZP_07906668.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325913047|ref|ZP_08175420.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
 gi|259166970|gb|EEW51465.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|308168690|gb|EFO70790.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|311089885|gb|EFQ48305.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315489110|gb|EFU78752.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325477727|gb|EGC80866.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
          Length = 362

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + ++   ++  + E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  +++++   D R+D 
Sbjct: 169 SGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A+     K  +G G    +IR+Y   P   V D R  +       +++G+L+D + A
Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344

Query: 350 TL 351
            +
Sbjct: 345 LV 346


>gi|91081965|ref|XP_967739.1| PREDICTED: similar to AGAP012082-PA, partial [Tribolium castaneum]
          Length = 383

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 178/327 (54%), Gaps = 21/327 (6%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIE-----AKMLMRERQHLDNAISFIKEIQDRLCD 68
           +D D A++ +S  N      H ++ +++     A     + Q L NA++  K+  + + +
Sbjct: 27  YDLDLAIKGVSLRNYIKRLEHEYEGLLKLNNYTANSRFHQLQPLINALNERKDAVENIQN 86

Query: 69  NLILLELALEEDD--CSILQETSDNLQ-RIKLEVEYKQFESLLSG--EADSNDAYLEVHA 123
              L EL  E+DD    + +E     + RIK  ++ K  E++L    E + N   LEV+A
Sbjct: 87  ---LSELLNEKDDDIRKLAEEEKLTFESRIK-SIDEKLLEAILPSDKEDECNSIVLEVNA 142

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +AN L  MY  +AE + ++T+  +    +  GI+ A+ LI GP  + + K 
Sbjct: 143 GVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIRHASALINGPQVFQFFKH 202

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ RI   +   R HTS  S+   P   + IE+ I   D +I+T RASGAGGQHV
Sbjct: 203 EAGVHRVQRIPTTEKAGRIHTSTVSVVALPQPTE-IEVNIDNKDLKIETKRASGAGGQHV 261

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT+SAVR+TH+PTG  V+CQ +RSQ KN+  A   LRA +Y+ +L+  E+IA      K
Sbjct: 262 NTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQRDLE--EQIARNENMRK 319

Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLR 327
            ++       +IR+Y   P   + D R
Sbjct: 320 NQVRSNFRNEKIRTYNF-PQDRITDHR 345


>gi|67923568|ref|ZP_00517041.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
 gi|67854594|gb|EAM49880.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
          Length = 370

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 146/244 (59%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE +++  + +     +  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQRWNVKLVSESLADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +EIEI   D  + T
Sbjct: 172 TGEQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEIEIDPKDIEMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQ 290

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348
           +E   +    ++++G G   RS  ++ Y   KD R    + S +      L+GD+D+ ++
Sbjct: 291 QEA--VSSMRRSQVGTGS--RSEKIRTYNY-KDNRVTDHRLSQNFALVGALEGDIDNIIE 345

Query: 349 ATLA 352
           + ++
Sbjct: 346 SCIS 349


>gi|302829783|ref|XP_002946458.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
 gi|300268204|gb|EFJ52385.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 171/336 (50%), Gaps = 61/336 (18%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+R R+ L++  + +K+   R+         A+ E++   LQ+ +  L R       +  
Sbjct: 45  LLRVRRELEDLAALLKDPDSRV--------RAMAEEEGRELQQQAAGLTR-------RLL 89

Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE------- 156
            +L+  +  D   A LE+ AGAGG E+  +   LL MY ++A  R +  + +E       
Sbjct: 90  LALVPRDPRDGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVP 149

Query: 157 ---------IHDGEEAGIKSATLLIK----------------GPNAYGWLKGEQGVHRLV 191
                    + DG  AG ++  +                       YG L  E GVHR+ 
Sbjct: 150 GGVKHVVAAVADGRGAGRRAGEIGDGGEGYDGGEGNGDQDGDAIGVYGTLLPESGVHRVQ 209

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+ +++++ + D RI+T RASGAGGQHVN TDSAVR
Sbjct: 210 RVPVTEAQGRVHTSTVAVVVLPQADE-VDVKLRDEDLRIETMRASGAGGQHVNVTDSAVR 268

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSKTE 305
           ITH+PTG+VV CQ ERSQH N+A A  +LRA+LY+LE+QKR      +  A +  + ++E
Sbjct: 269 ITHVPTGLVVSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSE 328

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                +IR+Y   P   V D RT++       VL G
Sbjct: 329 -----RIRTYNF-PQGRVTDHRTHLTLHDLDSVLVG 358


>gi|294660260|ref|NP_852919.2| peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|46576715|sp|Q7NBX3|RF1_MYCGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|284811917|gb|AAP56487.2| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930381|gb|ADC30320.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(high)]
          Length = 360

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 13/245 (5%)

Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           AD ND     +E+   AGG ES  +   +  +Y  +  K  +K   +E+      G    
Sbjct: 106 ADPNDDKEVIVEMRPAAGGDESSIFVGNMFDLYKEYCSKHNWKINVIEMLPTS-VGYSFI 164

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G + Y  +K E GVHR+ R+   ++  R HTS  +I V P  DD +EIEI+ +D 
Sbjct: 165 SFEINGEDVYSKMKFESGVHRVQRVPATEAKGRVHTSTITIAVLPQQDD-VEIEINPADL 223

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-L 287
           RIDTYRASGAGGQHVN T+SAVRITHIPTG+V  CQ+ +SQ  N+  A  MLR+KL+E  
Sbjct: 224 RIDTYRASGAGGQHVNRTESAVRITHIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAA 283

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           E +K + ++ +    K ++G G    +IR+Y   P   V D R N+   S    + G++D
Sbjct: 284 EKEKNDALSAL---RKNQVGSGDRAEKIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEID 339

Query: 345 DFMKA 349
           + + A
Sbjct: 340 EMIDA 344


>gi|284931146|gb|ADC31084.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. F]
          Length = 360

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 13/245 (5%)

Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           AD ND     +E+   AGG ES  +   +  +Y  +  K  +K   +E+      G    
Sbjct: 106 ADPNDDKEVIVEMRPAAGGDESSIFVGNMFDLYKEYCSKHNWKINVIEMLPTS-VGYSFI 164

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G + Y  +K E GVHR+ R+   ++  R HTS  +I V P  DD +EIEI+ +D 
Sbjct: 165 SFEINGEDVYSKMKFESGVHRVQRVPATEAKGRVHTSTITIAVLPQQDD-VEIEINPADL 223

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-L 287
           RIDTYRASGAGGQHVN T+SAVRITHIPTG+V  CQ+ +SQ  N+  A  MLR+KL+E  
Sbjct: 224 RIDTYRASGAGGQHVNRTESAVRITHIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAA 283

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           E +K + ++ +    K ++G G    +IR+Y   P   V D R N+   S    + G++D
Sbjct: 284 EKEKNDALSAL---RKNQVGSGDRAEKIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEID 339

Query: 345 DFMKA 349
           + + A
Sbjct: 340 EMIDA 344


>gi|153210408|ref|ZP_01947622.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
 gi|120575132|gb|EAX31756.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
          Length = 267

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/159 (46%), Positives = 102/159 (64%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LE+ AG GG E+  +A  L RMY R+AE + ++   +  H+GE  G K     +
Sbjct: 109 DERNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT
Sbjct: 169 IGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ER   K
Sbjct: 229 FRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERRNTK 267


>gi|270007320|gb|EFA03768.1| hypothetical protein TcasGA2_TC013879 [Tribolium castaneum]
          Length = 387

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 178/327 (54%), Gaps = 21/327 (6%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIE-----AKMLMRERQHLDNAISFIKEIQDRLCD 68
           +D D A++ +S  N      H ++ +++     A     + Q L NA++  K+  + + +
Sbjct: 27  YDLDLAIKGVSLRNYIKRLEHEYEGLLKLNNYTANSRFHQLQPLINALNERKDAVENIQN 86

Query: 69  NLILLELALEEDD--CSILQETSDNLQ-RIKLEVEYKQFESLLSG--EADSNDAYLEVHA 123
              L EL  E+DD    + +E     + RIK  ++ K  E++L    E + N   LEV+A
Sbjct: 87  ---LSELLNEKDDDIRKLAEEEKLTFESRIK-SIDEKLLEAILPSDKEDECNSIVLEVNA 142

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +AN L  MY  +AE + ++T+  +    +  GI+ A+ LI GP  + + K 
Sbjct: 143 GVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIRHASALINGPQVFQFFKH 202

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ RI   +   R HTS  S+   P   + IE+ I   D +I+T RASGAGGQHV
Sbjct: 203 EAGVHRVQRIPTTEKAGRIHTSTVSVVALPQPTE-IEVNIDNKDLKIETKRASGAGGQHV 261

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT+SAVR+TH+PTG  V+CQ +RSQ KN+  A   LRA +Y+ +L+  E+IA      K
Sbjct: 262 NTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQRDLE--EQIARNENMRK 319

Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLR 327
            ++       +IR+Y   P   + D R
Sbjct: 320 NQVRSNFRNEKIRTYNF-PQDRITDHR 345


>gi|326771965|ref|ZP_08231250.1| peptide chain release factor 1 [Actinomyces viscosus C505]
 gi|326638098|gb|EGE38999.1| peptide chain release factor 1 [Actinomyces viscosus C505]
          Length = 364

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 140/249 (56%), Gaps = 9/249 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+  D +  G K   L I
Sbjct: 102 DSRDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 161

Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  GP       +  LK E GVHR+ R+   +S  R HTS + + V P  DD  E++I  
Sbjct: 162 KARGPVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 221

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  A  +LRA+L 
Sbjct: 222 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLL 281

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                     A     S+   +    +IR+Y   P   + D RT  +  +   VLDGDL 
Sbjct: 282 AERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLG 340

Query: 345 DFMKATLAI 353
             + + +A+
Sbjct: 341 PVIASAIAM 349


>gi|298346212|ref|YP_003718899.1| peptide subunit release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304390026|ref|ZP_07371980.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|298236273|gb|ADI67405.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304326508|gb|EFL93752.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 367

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 145/247 (58%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  L+RMY  +AEK  +  + L + + +  G+K A++  
Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWAVQVLGLTESDLGGVKDASIAF 165

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K      P    W  LK E GVHR+ R+   +S  R HTS + + V P  +++ +IEI  
Sbjct: 166 KAKGNPSPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK     +LR++L 
Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +LE +KRE  A    +S+   +    +IR+Y   P   + D RT  +  +   VL+GDL 
Sbjct: 286 QLEAEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLA 344

Query: 345 DFMKATL 351
             +++ +
Sbjct: 345 PVIQSAI 351


>gi|303287338|ref|XP_003062958.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455594|gb|EEH52897.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 294

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 153/267 (57%), Gaps = 12/267 (4%)

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            S+  E  D L      +E K    LL S +AD   A LE+ AGAGG E+  +A  L RM
Sbjct: 10  ASMASEEHDALASTVPALEEKLAHLLLPSDDADDGGAILEIRAGAGGDEAARFAANLARM 69

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN- 199
           Y  +A +R +  E +     +E G K  T  + G + YG LK E GVHR VR     S  
Sbjct: 70  YDMFARRRGWTFERMTATTTDEGGYKDVTFNVSGDDVYGTLKYESGVHRRVRRVQRVSGD 129

Query: 200 -SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             + HTS +S+ V P  ++ +E+++ + D RIDT RASGAGGQHVNTT+SAVR+TH+P+G
Sbjct: 130 EGKVHTSTASVAVMPHAEE-VELDLRDEDVRIDTMRASGAGGQHVNTTNSAVRLTHVPSG 188

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWG---RQIRS 314
            VV    ERSQHKNK +A+ +LRA++YE L  +   E A+     K+ IG G    ++R+
Sbjct: 189 TVVVMMDERSQHKNKEKAFKILRARIYEGLRAEAHRERAD---QRKSLIGSGDRSERVRT 245

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y  +  + VKD R N +      +L+G
Sbjct: 246 YNYKDGR-VKDHRVNAQVNDLEGLLNG 271


>gi|262341278|ref|YP_003284133.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272615|gb|ACY40523.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 361

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 165/295 (55%), Gaps = 23/295 (7%)

Query: 74  ELALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSND---------------- 116
           +LAL ++   IL+  SD +L+ +    +YK  E+L S E +S D                
Sbjct: 59  KLALLQEADFILKNDSDADLKELASIEKYKILENLSSIEKESYDLIFSLSNETEETTENH 118

Query: 117 --AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
             A +E+ +G GG E+  +   +LRMYT + +K  +K + +    G   G K   L + G
Sbjct: 119 RNAIVELRSGTGGDEACLFVEDILRMYTMYFKKSGWKYKIIHAQKGGIKGYKEIILDVNG 178

Query: 175 P-NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
               YG LK E GVHR+ RI   +S  R HTS  ++ V P V D IE+ I+ SD + +T+
Sbjct: 179 KEGVYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLPQVKD-IEVNINLSDIKKETF 237

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVN T+SAVR+TH+P+ + V+CQ+ERSQHKN  +A N+LR+++Y+ E +KR 
Sbjct: 238 RSSGAGGQHVNKTESAVRLTHLPSKITVECQEERSQHKNFEKAINVLRSRIYQNEKEKRL 297

Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +  +I   S    G    +IR+Y   P   V D R +      +  ++G++ + +
Sbjct: 298 KEISIKRKSLVSTGDRSVKIRTYNY-PKSRVTDHRIHKSIYDLAGFMNGNIQEMI 351


>gi|72024372|ref|XP_797931.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115937037|ref|XP_001184225.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 422

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 137/243 (56%), Gaps = 4/243 (1%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S E D ND  +E  AG GG E+  +A  +  MY R+A  R +    LE    +  G++
Sbjct: 153 LPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRYAAYRGWTFSVLEYFTTDMGGLR 212

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A++ + G  AY  L+ E GVHR+ R+   +S  R HTS  +I V P   + I++++   
Sbjct: 213 HASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQPKE-IDLKLDPK 271

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R++T +ASGAGGQHVNTTDSAVRITH+PTG+  + QQERSQHKN++ A  ML+ ++Y 
Sbjct: 272 DLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRSIAMTMLQTRIYN 331

Query: 287 LELQKREEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             L  +        SS+   G GR  +IR+Y  Q  ++    R       P  +L  +L 
Sbjct: 332 RILADQTSSERSMRSSQVGTG-GRSEKIRTYNYQQDRITDHRRGRTVHGVPEYLLGSELL 390

Query: 345 DFM 347
           D M
Sbjct: 391 DEM 393


>gi|325911742|ref|ZP_08174149.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
 gi|325476508|gb|EGC79667.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
          Length = 362

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + ++   ++  + E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  +++++   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A+     K  +G G    +IR+Y   P   V D R  +       +++G+L+D + A
Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344

Query: 350 TL 351
            +
Sbjct: 345 LV 346


>gi|312871649|ref|ZP_07731741.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
 gi|311092874|gb|EFQ51226.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
          Length = 362

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + ++   ++  + E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  +++++   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +  A+     K  +G G    +IR+Y   P   V D R  +       +++G+L+D + A
Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344

Query: 350 TL 351
            +
Sbjct: 345 LV 346


>gi|315657282|ref|ZP_07910164.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491754|gb|EFU81363.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 367

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 145/247 (58%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  L+RMY  +AEK  +  + L + + +  G+K A++  
Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAF 165

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K      P    W  LK E GVHR+ R+   +S  R HTS + + V P  +++ +IEI  
Sbjct: 166 KAKGNPSPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK     +LR++L 
Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +LE +KRE  A    +S+   +    +IR+Y   P   + D RT  +  +   VL+GDL 
Sbjct: 286 QLEAEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLA 344

Query: 345 DFMKATL 351
             +++ +
Sbjct: 345 PVIQSAI 351


>gi|315654795|ref|ZP_07907700.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
 gi|315490756|gb|EFU80376.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
          Length = 367

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 145/247 (58%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  L+RMY  +AEK  +  + L + + +  G+K A++  
Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAF 165

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K      P    W  LK E GVHR+ R+   +S  R HTS + + V P  +++ +IEI  
Sbjct: 166 KAKGNPSPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK     +LR++L 
Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +LE +KRE  A    +S+   +    +IR+Y   P   + D RT  +  +   VL+GDL 
Sbjct: 286 QLEAEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLA 344

Query: 345 DFMKATL 351
             +++ +
Sbjct: 345 PVIQSAI 351


>gi|257056964|ref|YP_003134796.1| peptide chain release factor 1 [Saccharomonospora viridis DSM
           43017]
 gi|256586836|gb|ACU97969.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharomonospora
           viridis DSM 43017]
          Length = 358

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/337 (35%), Positives = 181/337 (53%), Gaps = 12/337 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  +   A+ L R    L   +  + E++    +     ELA E  D S  
Sbjct: 16  LEKQLADPAVHADQARARKLGRRYSELSPVVKTVGELETTRSELEAAKELAAE--DSSFA 73

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           +E  D L +    +E K  E LL  +  D +D  +E+ +G GG ES  +A  LLRMY R+
Sbjct: 74  EEV-DRLGKRVSALETKLAELLLPRDPYDGSDVVMEIKSGEGGEESALFAGDLLRMYLRF 132

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIK--GPNAYG-W--LKGEQGVHRLVRISPYDSN 199
           AE++ +  E L+    +  G K  T+ +K  G  A G W  LK E GVHR+ R+   +S 
Sbjct: 133 AERQGWTAEILDATPSDLGGYKDVTVSVKSKGTEAEGVWACLKFEGGVHRVQRVPATESQ 192

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS + + +Y    + IE+EI  +D RID +R+SG GGQ VNTTDSAVR+TH+PTG+
Sbjct: 193 GRIHTSAAGVLIY-PEPEEIEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRVTHLPTGI 251

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318
           VV CQ E+SQ +N+A+A  +L+A+L  L  ++    A     S+   +    ++R+Y   
Sbjct: 252 VVSCQNEKSQIQNRARAIQVLQARLQALAEEEAAAKAADARRSQVRTVDRSERVRTYNF- 310

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   + D R N +  +   VLDG+L   ++A  A  +
Sbjct: 311 PENRISDHRVNYKAYNLDQVLDGELSGVLEALRAADR 347


>gi|300361412|ref|ZP_07057589.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
 gi|300354031|gb|EFJ69902.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
          Length = 362

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 139/243 (57%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + +K   ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS +++ V P  +  ++I++   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRVPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R++        K  +G G    +IR+Y   P   V D R  +       V++G+LD+ + 
Sbjct: 288 RDK---YDAKRKDAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIIN 343

Query: 349 ATL 351
           A +
Sbjct: 344 ALV 346


>gi|42518855|ref|NP_964785.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227889713|ref|ZP_04007518.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|268319749|ref|YP_003293405.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|61214647|sp|Q74K25|RF1_LACJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41583141|gb|AAS08751.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227849577|gb|EEJ59663.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|262398124|emb|CAX67138.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|329667598|gb|AEB93546.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026]
          Length = 362

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 9/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + +K   ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ R+   +S  R HTS +++ V P  +  ++I++   D R+D 
Sbjct: 169 TGDKVYSKLKYENGAHRVQRVPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R++        K  +G G    +IR+Y   P   V D R  +       +++G+LD+ + 
Sbjct: 288 RDQ---YDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIN 343

Query: 349 A 349
           A
Sbjct: 344 A 344


>gi|227875209|ref|ZP_03993351.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269978100|ref|ZP_06185050.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307700819|ref|ZP_07637844.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
 gi|227844114|gb|EEJ54281.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269933609|gb|EEZ90193.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307613814|gb|EFN93058.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
          Length = 366

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 161/290 (55%), Gaps = 19/290 (6%)

Query: 74  ELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           E+A E+ D +     LQE  D +Q   +E+   +         D+ D  +E+ AG GG E
Sbjct: 69  EMAAEDPDFAAELPKLQEAFDTVQAALIEILTPRDPD------DARDVIMEIKAGEGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LK 182
           S  +A  L+RMY  +AEK  +  + L + + +  G+K A +  K      P    W  LK
Sbjct: 123 SALFAGDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLK 182

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ 
Sbjct: 183 YEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQS 242

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S
Sbjct: 243 VNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARAS 302

Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   +    +IR+Y   P   + D RT  +  +   VL+G+L   +++ +
Sbjct: 303 QVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAI 351


>gi|104773785|ref|YP_618765.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|119361552|sp|Q1GAX5|RF1_LACDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|103422866|emb|CAI97528.1| Peptide chain release factor 1 (RF-1) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 361

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 9/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + +    ++    E  G K A ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRAAIMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I++   + R+D 
Sbjct: 169 TGNKVYSKLKYENGAHRVQRIPVTESAGRVHTSTATVAVMPEYE-QVDIDLDPKEIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+  E Q 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R++        K  +G G    +IR+Y   P   V D R  +       +++G+LD+ + 
Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVID 343

Query: 349 A 349
           A
Sbjct: 344 A 344


>gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440]
 gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora
           tropica CNB-440]
          Length = 362

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 139/240 (57%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  LLRMYTR+AE+  +  E ++  D +  G+K  +L I
Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAI 160

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +  LK E GVHR+ R+   +S  R HTS + + + P  ++ I++ I  
Sbjct: 161 KSKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLMLPEAEE-IDVTIDP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L 
Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARLL 279

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            +  ++ +  A+    ++   +    +IR+Y   P   + D R      +    L G+LD
Sbjct: 280 AVAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338


>gi|126697059|ref|YP_001091945.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9301]
 gi|166223586|sp|A3PF19|RF1_PROM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126544102|gb|ABO18344.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9301]
          Length = 364

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 184/348 (52%), Gaps = 25/348 (7%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQDRLCDNLI 71
           A +    L  +  DP +  +  + + + RER  L+  +          KEI+D    NL 
Sbjct: 13  ASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIED--SKNL- 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           L E   +++  S++ E    L+  K E+  K   +LL  +  D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P  D  +E++I  +D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGW 308
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L++    AN  E S+  +++G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGT 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
           G   RS  ++ Y   KD RT   +     S   +L G LD+ + A +A
Sbjct: 305 GD--RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVINACIA 349


>gi|75906944|ref|YP_321240.1| peptide chain release factor 1 [Anabaena variabilis ATCC 29413]
 gi|119361508|sp|Q3MF91|RF1_ANAVT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75700669|gb|ABA20345.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena
           variabilis ATCC 29413]
          Length = 366

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 147/244 (60%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+A+ + ++ + +    GE  G K   L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +EI I   D  + T
Sbjct: 172 QGDSVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDE-VEIHIDPKDIEMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348
           +E   +    ++++G G   RS  ++ Y   KD R    +     S + VL+GDL+  ++
Sbjct: 291 QE--EVTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFSLNPVLEGDLETVIQ 345

Query: 349 ATLA 352
           + ++
Sbjct: 346 SCIS 349


>gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
 gi|262085195|gb|ACY21163.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
          Length = 364

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/249 (39%), Positives = 146/249 (58%), Gaps = 7/249 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  LE+ +GAGG ES  +A  L RMY ++ E+  +K + L + + +  G K ATL I
Sbjct: 110 DGDDVVLEIKSGAGGEESALFAADLARMYLKYCERHGWKAQVLGVTESDLGGYKEATLSI 169

Query: 173 KGPNA-----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           K   A     +  LK E GVHR+ R+   +S  R HTS + + +YP  ++  ++ I ESD
Sbjct: 170 KAKEAVREGVWSRLKFEGGVHRVQRVPVTESQGRIHTSAAGVLIYPEPEELEQVAIDESD 229

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L   
Sbjct: 230 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAA 289

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++ +  A  G +++   +    +IR+Y   P   + D R   +  +   VL G++D  
Sbjct: 290 AEEEAQAAAAQGRAAQIRTVDRSERIRTYNF-PENRIADHRIGYKANNLDAVLGGEMDGL 348

Query: 347 MKATLAIKK 355
           + A +A  +
Sbjct: 349 LDALVAADR 357


>gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 prfa [Rhodococcus equi 103S]
 gi|325673529|ref|ZP_08153220.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
 gi|311888505|emb|CBH47817.1| peptide chain release factor 1 PrfA [Rhodococcus equi 103S]
 gi|325555550|gb|EGD25221.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
          Length = 359

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 143/243 (58%), Gaps = 7/243 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  LE+ +G GG ES  +A+ L RMY R+AE+  ++ E L+    +  G K AT+ I
Sbjct: 105 DGDDVVLELKSGEGGEESALFASDLARMYVRYAERAGWRVEILDATVSDLGGYKDATISI 164

Query: 173 KGPN-----AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           K         +  LK E GVHR+ R+   +S  R HTS + + +YP  ++  E++I E+D
Sbjct: 165 KSKGDVRDGVWSRLKFEGGVHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETD 224

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L   
Sbjct: 225 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAA 284

Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             +  +  A+ G  S+   +    +IR+Y   P   + D R   +  +   VLDGD++  
Sbjct: 285 AEEAADAEASAGRQSQVRTVDRSERIRTYNF-PENRITDHRIGFKAHNLDAVLDGDMEAL 343

Query: 347 MKA 349
           + A
Sbjct: 344 LDA 346


>gi|209527112|ref|ZP_03275626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209492452|gb|EDZ92793.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 371

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 142/242 (58%), Gaps = 8/242 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE + ++   L     +  G K A L I
Sbjct: 115 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEI 174

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +E++I   D  + T
Sbjct: 175 QGARVYSQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDPKDIEMTT 233

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C +ERSQ KN+ +A  +LRAKLYE +L  R
Sbjct: 234 ARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--R 291

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    ++++G G    +IR+Y  +  + V D R      S + VL+G + D ++A
Sbjct: 292 EQQDAVTSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-HNFSLAPVLEGGIGDLIQA 349

Query: 350 TL 351
            +
Sbjct: 350 CI 351


>gi|149192359|ref|ZP_01870562.1| peptide chain release factor 1 [Vibrio shilonii AK1]
 gi|148833798|gb|EDL50832.1| peptide chain release factor 1 [Vibrio shilonii AK1]
          Length = 229

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/217 (41%), Positives = 134/217 (61%), Gaps = 6/217 (2%)

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+++AEK+ ++ E +  ++ E+ G K     + G  AYG LK E G HR+ R+   +
Sbjct: 1   FRMYSKYAEKKGWRIEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATE 60

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PT
Sbjct: 61  SQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPT 120

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G VV+CQ ERSQHKNKA+A ++L A+   +  ++ +  A + ++ +  +G G    +IR+
Sbjct: 121 GTVVECQDERSQHKNKAKAMSVLAAR--IIAAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 178

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   V D R N+     S+V++GDL   +   L
Sbjct: 179 YNY-PQGRVSDHRINLTLYRLSEVMEGDLQSLVDPVL 214


>gi|17231677|ref|NP_488225.1| peptide chain release factor 1 [Nostoc sp. PCC 7120]
 gi|20139331|sp|Q8YPK9|RF1_ANASP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17133320|dbj|BAB75884.1| translation releasing factor RF-1 [Nostoc sp. PCC 7120]
          Length = 366

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 147/244 (60%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+A+ + ++ + +    GE  G K   L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +EI I   D  + T
Sbjct: 172 QGESVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDE-VEIHIDPKDIEMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348
           +E   +    ++++G G   RS  ++ Y   KD R    +     S + VL+GDL+  ++
Sbjct: 291 QE--EVTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFSLNPVLEGDLETVIQ 345

Query: 349 ATLA 352
           + ++
Sbjct: 346 SCIS 349


>gi|329945388|ref|ZP_08293151.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328529010|gb|EGF55941.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 364

 Score =  159 bits (401), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 9/249 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+  D +  G K   L I
Sbjct: 102 DARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 161

Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  GP       +  LK E GVHR+ R+   +S  R HTS + + V P  DD  E++I  
Sbjct: 162 KTRGPVEPQNGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 221

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  A  +LRA+L 
Sbjct: 222 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLL 281

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                     A     S+   +    +IR+Y   P   + D RT  +  +   VLDGDL 
Sbjct: 282 AERAAAVAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLG 340

Query: 345 DFMKATLAI 353
             + + +A+
Sbjct: 341 PVIASAIAM 349


>gi|194246573|ref|YP_002004212.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
 gi|193806930|emb|CAP18362.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
          Length = 347

 Score =  159 bits (401), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 162/291 (55%), Gaps = 25/291 (8%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG--EADSNDAYL 119
           IQ+   +N  LL LA +E +  IL E        K+  E K+ + LL      D+ +  +
Sbjct: 62  IQNDSNNNDDLLNLAFQEQE--ILNE--------KIHNELKKIKYLLFPLEPEDNKNVIM 111

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           ++   AGG E+  ++  L RMY ++AE + +K E L +    + GI S   ++ G   Y 
Sbjct: 112 QIKGAAGGDEANLFSADLFRMYCKYAELKNWKLEILNLMTNIKGGISSVEFILSGKKVYY 171

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E GVHR+ R+   +   R HTS S++ V P VD+ I+ +I   D R DT+ +SG G
Sbjct: 172 FLKYESGVHRVQRVPTTEVQGRIHTSTSTVLVMPEVDE-IDFKIDWKDIRFDTFNSSGPG 230

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE------LELQKRE 293
           GQ VNTT SAVR+TH+P+ + V CQ  +SQH+NK +A+++L+A++Y+      +E + ++
Sbjct: 231 GQSVNTTKSAVRLTHLPSNISVACQIGKSQHENKKKAFSLLKARIYDKIHKQNMEKENKK 290

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
               +G+  ++E     +IR+Y   P   + D R ++       +++G LD
Sbjct: 291 RKFLVGDGQRSE-----KIRTYNY-PQNRITDHRISLNLKKLDIIMEGKLD 335


>gi|332712139|ref|ZP_08432067.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
 gi|332348945|gb|EGJ28557.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
          Length = 370

 Score =  159 bits (401), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 149/246 (60%), Gaps = 14/246 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R++E + ++ + L     +  G K A L I
Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLVRMYSRYSESQNWRVKLLSESLADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS +++ V P VD+ +++EI   +  I T
Sbjct: 172 QGEQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDE-VDVEIDPKEIEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++LQ++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLYHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLQEQ 290

Query: 293 EEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E       A +G  +++E     +IR+Y  +  + V D R   +  S + +L+GDL+  
Sbjct: 291 QEAVTSMRRAQVGTGARSE-----KIRTYNYKDNR-VTDHRLG-QNYSLAPLLEGDLEGL 343

Query: 347 MKATLA 352
           ++A ++
Sbjct: 344 IQACIS 349


>gi|307154812|ref|YP_003890196.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
 gi|306985040|gb|ADN16921.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 149/243 (61%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE +++  + +     +  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQRWAVKLVSESLADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +E++I   D  I T
Sbjct: 172 QGDSVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEVQIDPKDLEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +    ++++G G    +IR+Y  +  + V D R   +  S    L+GD+D+ +++
Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFSLVGALEGDIDEIIQS 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
 gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
          Length = 362

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/240 (37%), Positives = 139/240 (57%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  LLRMYTR+AE+  +  E ++  D +  G+K  +L I
Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAI 160

Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K       G   +  LK E GVHR+ R+   +S  R HTS + + + P  ++ +++ I  
Sbjct: 161 KSKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLMLPEAEE-VDVTIDP 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L 
Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQALRILRARLL 279

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            +  ++ +  A+    ++   +    +IR+Y   P   + D R      +    L G+LD
Sbjct: 280 AVAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338


>gi|320533186|ref|ZP_08033906.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134600|gb|EFW26828.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 340

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 9/249 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+  D +  G K   L I
Sbjct: 78  DARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 137

Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  GP       +  LK E GVHR+ R+   +S  R HTS + + V P  DD  E++I  
Sbjct: 138 KTRGPTEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 197

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  A  +LRA+L 
Sbjct: 198 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLL 257

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                     A     S+   +    +IR+Y   P   + D RT  +  +   VLDGDL 
Sbjct: 258 AERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLG 316

Query: 345 DFMKATLAI 353
             + + +A+
Sbjct: 317 PVIASAIAM 325


>gi|119511149|ref|ZP_01630266.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
 gi|119464137|gb|EAW45057.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
          Length = 365

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 147/243 (60%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LLRMY+R+AE + +K + +    GE  G K   L I
Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYAELQHWKVKLVSESLGEMGGFKEVILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +EI I   D  + T
Sbjct: 172 QGDSVYSQLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDD-VEIHIDPKDIEMST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++A  + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L ++
Sbjct: 231 ARSGGAGGQNVNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLAEQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++   +    ++++G G    +IR+Y  +  + V D R   +  S + VL+G+L+  +++
Sbjct: 291 QDA--VTSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNYSLNPVLEGELETVIQS 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|284050702|ref|ZP_06380912.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca]
 gi|291567816|dbj|BAI90088.1| peptide chain release factor 1 [Arthrospira platensis NIES-39]
          Length = 371

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 142/242 (58%), Gaps = 8/242 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE + ++   L     +  G K A L I
Sbjct: 115 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEI 174

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +E++I   D  + T
Sbjct: 175 QGDRVYSQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDAKDIEMTT 233

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C +ERSQ KN+ +A  +LRAKLYE +L  R
Sbjct: 234 ARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--R 291

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    ++++G G    +IR+Y  +  + V D R      S + VL+G + D ++A
Sbjct: 292 EQQDAVTSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-HNFSLAPVLEGGIGDLIQA 349

Query: 350 TL 351
            +
Sbjct: 350 CV 351


>gi|62719461|gb|AAX93331.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis]
          Length = 156

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/155 (54%), Positives = 108/155 (69%), Gaps = 1/155 (0%)

Query: 178 YGWLKGEQG-VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           YG+LK  +G    LVR+SP+DS  RRHTS +S+ V P +D++   +I+  D RID +R+S
Sbjct: 1   YGYLKIRKGEFIGLVRLSPFDSAGRRHTSLASVNVMPELDENANGDINPDDLRIDVFRSS 60

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A NML++KLYELE +K+ E  
Sbjct: 61  GAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEK 120

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
              E  + EIGWG QIRSYV  PY MVKD  T  E
Sbjct: 121 AKIEGKQLEIGWGSQIRSYVFHPYTMVKDHGTGHE 155


>gi|254431314|ref|ZP_05045017.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
 gi|197625767|gb|EDY38326.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
          Length = 365

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 181/360 (50%), Gaps = 36/360 (10%)

Query: 13  LFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           L D   A +R    L  +  DP +  N  + + + RER  L+  +   +++Q  L    D
Sbjct: 6   LHDRLEAARRTFETLERQLADPAVASNPDQLQAIARERARLEPLVLDQRQLQKLLAEEAD 65

Query: 69  NLILL-----ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVH 122
              LL     + A+EE     L++ ++ +  ++  +      +LL  +  D     LE+ 
Sbjct: 66  ARTLLRDHRGDRAMEELASEELKQLAERIHSLRTSLTI----ALLPRDPRDERSVMLEIR 121

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG E+  WA  L RMY R+A+   ++ E +   + E  G K   L I+G   +  LK
Sbjct: 122 AGAGGDEAAIWAGDLARMYERYAQSVGWRVEPVSASEAELGGYKELILSIRGEGVFSQLK 181

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS +++ V P   D +E++I   D  I T R+ GAGGQ+
Sbjct: 182 FEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVEVQIEPGDVEISTARSGGAGGQN 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL------QKREEIA 296
           VN  ++AV + H P+G+ V C QERSQ +N+ +A  +LRAKLYE +L      ++   +A
Sbjct: 241 VNKVETAVDLLHKPSGIRVFCTQERSQMQNRERAMEILRAKLYERQLAEANARERSARLA 300

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
            +G   ++E     +IR+Y        KD R    +     S   VL+G L D + A +A
Sbjct: 301 QVGSGDRSE-----KIRTY------NYKDNRATDHRLGRNFSLEPVLNGQLQDVIGACIA 349


>gi|258512739|ref|YP_003186173.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479465|gb|ACV59784.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 356

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D ++E+ A AGG E+  +A  LLRMY R+AEK  +KTE ++    +  G +   + +
Sbjct: 106 DDKDVFVEIRAAAGGEEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS ++        + +E+EI E D RIDT
Sbjct: 166 HGKGAYAKLKFESGTHRVQRVPVTESGGRIHTS-TATVAVLPEVEEVEVEIHEKDLRIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ++G GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KNK +A  +LRA+LY  E  +R
Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLY--EKAQR 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    + ++G G    +IR+Y   P   V D R  +       VLDG+LD+ ++A
Sbjct: 283 EQQEELAAKRRLQVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|72071048|ref|XP_793802.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
 gi|115937039|ref|XP_001184371.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
          Length = 298

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 136/243 (55%), Gaps = 4/243 (1%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S E D ND  +E  AG GG E+  +A  +  MY R+A  R +    LE    +  G++
Sbjct: 29  LPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRFAAYRGWTFSVLEYFTTDMGGLR 88

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A++ + G  AY  L+ E GVHR+ R+   +S  R HTS  +I V P   + I++++   
Sbjct: 89  HASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQPKE-IDLKLDPK 147

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R++T +ASGAGGQHVNTTDSAVRITH+PTG+  + QQERSQHKN+  A  ML+ ++Y 
Sbjct: 148 DLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRFIAMTMLQTRIYN 207

Query: 287 LELQKREEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             L  +        SS+   G GR  +IR+Y  Q  ++    R       P  +L  +L 
Sbjct: 208 RILADQTSSERSIRSSQVGTG-GRSEKIRTYNYQQDRITDHRRGRTVHGVPEYLLGSELL 266

Query: 345 DFM 347
           D M
Sbjct: 267 DEM 269


>gi|301029486|ref|ZP_07192568.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
 gi|299877629|gb|EFI85840.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
          Length = 219

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 127/207 (61%), Gaps = 6/207 (2%)

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R+++ E +   +GE  G K     I G   YG LK E G HR+ R+   +S  R HTS  
Sbjct: 1   RRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSAC 60

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 61  TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 120

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQMVK 324
           SQHKNKA+A ++L A+++  E+ KR++      + +  +G G +    R+Y   P   V 
Sbjct: 121 SQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVT 177

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+      +V++G LD  ++  +
Sbjct: 178 DHRINLTLYRLDEVMEGKLDMLIEPII 204


>gi|306818471|ref|ZP_07452194.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
 gi|304648644|gb|EFM45946.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
          Length = 366

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 144/247 (58%), Gaps = 9/247 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG ES  +A  L+RMY  +AEK  +  + L + + +  G+K A +  
Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAF 165

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K      P    W  LK E GVHR+ R+   +S  R HTS + + V P  +++ +IEI  
Sbjct: 166 KAKGNPTPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV  Q E+SQ +NK     +LR++L 
Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +LE +KRE  A    +S+   +    +IR+Y   P   + D RT  +  +   VL+G+L 
Sbjct: 286 QLEQEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELA 344

Query: 345 DFMKATL 351
             +++ +
Sbjct: 345 PVIQSAI 351


>gi|218289204|ref|ZP_03493439.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240552|gb|EED07732.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 356

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D ++E+ A AGG E+  +A  LLRMY R+AEK  +KTE ++    +  G +   + +
Sbjct: 106 DDKDVFVEIRAAAGGEEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E G HR+ R+   +S  R HTS ++        + +E+EI E D RIDT
Sbjct: 166 HGKGAYAKLKFESGTHRVQRVPITESGGRIHTS-TATVAVLPEVEEVEVEIHEKDLRIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + ++G GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KNK +A  +LRA+LY  E  +R
Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLY--EKAQR 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    + ++G G    +IR+Y   P   V D R  +       VLDG+LD+ ++A
Sbjct: 283 EQQEELAAKRRLQVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|16332286|ref|NP_443014.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803]
 gi|2500139|sp|P74707|RF1_SYNY3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1653916|dbj|BAA18826.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 365

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 127/206 (61%), Gaps = 6/206 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMYTR+AE + +K   L     +  G K A L +
Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +E++I   D  + T
Sbjct: 172 KGDRVYSQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVKIDPKDIEMST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLY++ LQ++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMMLQEQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSY 315
            +   I  + ++++G G    +IR+Y
Sbjct: 291 NDA--ISSNRRSQVGTGSRSEKIRTY 314


>gi|321479100|gb|EFX90056.1| hypothetical protein DAPPUDRAFT_299896 [Daphnia pulex]
          Length = 417

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 189/354 (53%), Gaps = 25/354 (7%)

Query: 5   RQLNCLGGLFDWDNAVQ---RLSFLNTKTE-DPHLWQNVIEAK--MLMRERQHLDNAISF 58
           R LN L  +  ++N      R+  LN K + D   +QN IE+K  + +  +QH+ +    
Sbjct: 43  RSLNLLNQVSTFENIFDPRLRIFLLNIKKKFDESGFQN-IESKSGIGVVNKQHIQSLAGL 101

Query: 59  IKEIQDRLCDNLILLEL-ALEEDD------CSILQETSDNLQRIKLEVEYKQFESLLSGE 111
             ++     D   L EL AL  DD        ++ E    L++I ++++ +  E +L  +
Sbjct: 102 GGKLLQTEND---LQELKALSADDDKNGDLAKMVSEEFSQLKQILVQIQNEVLELILQED 158

Query: 112 ADSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
               +   +E  AG GG ES  + N +L+MY  + E   +  E  +I   +  GI+ A +
Sbjct: 159 NHQTEGIIMEFSAGVGGQESMLFCNEILQMYITYCESEGWDYELTDIEKSDLEGIRHAAI 218

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I   +AY  L+ E GVHR+ R+   +   R HTS  ++ + P   + + + I + D +I
Sbjct: 219 CINNSDAYDRLQFESGVHRVQRVPKTEKAGRVHTSTVAVAILPRPSE-VTVNIEQKDLKI 277

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASGAGGQHVNTT+SAVRI HIP+GVV +CQ +RSQ +N+  A + +RA+L+++++ 
Sbjct: 278 ETKRASGAGGQHVNTTESAVRIVHIPSGVVAECQTQRSQMQNRKVAIDKIRARLFQMKID 337

Query: 291 KREEIANIGESSKTEIG-WGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             +++A    S K ++G  GR  +IR+Y   P   + D R N    +  + L G
Sbjct: 338 --QQLATTRSSRKLQVGSSGRSEKIRTYNF-PQDRITDHRINFTSHNLGEFLRG 388


>gi|116513791|ref|YP_812697.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123397|ref|YP_004033656.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|122275439|sp|Q04BB3|RF1_LACDB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116093106|gb|ABJ58259.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|312279960|gb|ADQ60679.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125449|gb|ADY84779.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
 gi|325684404|gb|EGD26572.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 361

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 9/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + +    ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I++   + R+D 
Sbjct: 169 TGNKVYSKLKYENGAHRVQRIPVTESAGRVHTSTATVAVMPEYE-QVDIDLDPKEIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+  E Q 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R++        K  +G G    +IR+Y   P   V D R  +       +++G+LD+ + 
Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVID 343

Query: 349 A 349
           A
Sbjct: 344 A 344


>gi|300812481|ref|ZP_07092907.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496542|gb|EFK31638.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 361

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 9/241 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  +E+   AGG E+  +A  LLRMY ++AE + +    ++    E  G K   ++I
Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMI 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E G HR+ RI   +S  R HTS +++ V P  +  ++I++   + R+D 
Sbjct: 169 TGNKVYSKLKYENGAHRVQRIPVTESAGRVHTSTATVAVMPEYE-QVDIDLDPKEIRVDV 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291
           YR+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+  E Q 
Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R++        K  +G G    +IR+Y   P   V D R  +       +++G+LD+ + 
Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVID 343

Query: 349 A 349
           A
Sbjct: 344 A 344


>gi|195398186|ref|XP_002057705.1| GJ17953 [Drosophila virilis]
 gi|194141359|gb|EDW57778.1| GJ17953 [Drosophila virilis]
          Length = 393

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 2/209 (0%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           L+   D      EV+AGAGG E+  +A  L  MYT + E   ++ E       +  G++ 
Sbjct: 122 LADHEDYPSLIFEVNAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEQYAHETTDIGGLRY 181

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           A LL+  P AY WL+ E GVHR+ R+   + + R HTS +SI V P   D +++ I+E D
Sbjct: 182 ANLLVNDPEAYNWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-VQVHIAERD 240

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+AKL + 
Sbjct: 241 LKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVESQSERSQLKNRELALKRLQAKLMQQ 300

Query: 288 ELQKREEIANIG-ESSKTEIGWGRQIRSY 315
           +L+  E       ++ +  +    +IR+Y
Sbjct: 301 QLESSEATKQATRKAQQGNLNRNEKIRTY 329


>gi|289706369|ref|ZP_06502727.1| peptide chain release factor 1 [Micrococcus luteus SK58]
 gi|289556864|gb|EFD50197.1| peptide chain release factor 1 [Micrococcus luteus SK58]
          Length = 369

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/250 (39%), Positives = 143/250 (57%), Gaps = 12/250 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  LE+  G GG E+  +A  LLRMY R+AE R +KTE L     +  G K   + +
Sbjct: 110 DARDVILEIKGGEGGEEAALFAGDLLRMYLRYAESRGWKTEVLSATHSDLGGYKDVHVAV 169

Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +G  A      Y  LK E GVHR+ R+   +S  R HTS + + V P VD   E+ +  +
Sbjct: 170 RGSAADPADGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPN 229

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+  A  +LR++L  
Sbjct: 230 DLKVDVFRSSGPGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRL-- 287

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           LE Q+ E+ A    +   ++       +IR+Y   P   + D RT  +  +   VLDGDL
Sbjct: 288 LERQRAEQDAEDSAARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDL 346

Query: 344 DDFMKATLAI 353
           +  + + LA+
Sbjct: 347 EAVIASCLAL 356


>gi|113954440|ref|YP_729638.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
 gi|119361628|sp|Q0ID34|RF1_SYNS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113881791|gb|ABI46749.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
          Length = 364

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 181/348 (52%), Gaps = 33/348 (9%)

Query: 24  SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILL----- 73
           SF N + +  DP +  +    + + RER  L+  +   + +++++        LL     
Sbjct: 16  SFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQAKSLLKESRG 75

Query: 74  ELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           + A+EE     LQE     +D +QRI L +       L     D     LE+ AGAGG E
Sbjct: 76  DAAMEELAQQELQELDRHHADLIQRITLAL-------LPKDPRDERSVMLEIRAGAGGDE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  WA  L RMY R++ +R +    +  ++ +  G K   L +KG   +  LK E GVHR
Sbjct: 129 ACLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P  D  +E++I   D  I T R+ GAGGQ+VN  ++A
Sbjct: 189 VQRVPSTESQGRVHTSTATVAVMPEAD-PVEVQIDPRDLDISTARSGGAGGQNVNKVETA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIG 307
           V + H PTG+ V C QERSQ +N+ +A  +LRAKLYE +L +    AN  E S  ++++G
Sbjct: 248 VDLMHKPTGIRVFCTQERSQMQNRERALEILRAKLYERQLAE----ANASERSARRSQVG 303

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y  +  +M  D R      S   VL+G +DD + A +A
Sbjct: 304 TGDRSEKIRTYNAKDNRMT-DHRLG-RNFSLDPVLEGQMDDVIDACIA 349


>gi|15672577|ref|NP_266751.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|13878663|sp|Q9CHX3|RF1_LACLA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12723487|gb|AAK04693.1|AE006292_13 peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406096|gb|ADZ63167.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 357

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++     K++ + + D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122
           +  +L E  L++D   +L+E  +S   Q+  LE E K    +L    D ND     LE+ 
Sbjct: 61  SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIK----ILLLPKDPNDGKNIILEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK
Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   ++  R HTS +++ V P V++  E+ I + D R+D Y ASGAGGQ+
Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIDQKDLRVDIYHASGAGGQN 235

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296
           VN   +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K++      EL+ Q  E  +
Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKS 295

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +G   ++E     +IR+Y   P   V D R  +       +L G +D+ + A + 
Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345


>gi|47096965|ref|ZP_00234541.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47014675|gb|EAL05632.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 314

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 159/281 (56%), Gaps = 10/281 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           ++D   AV+ R   LN    DP +  +    + L +E+  +   +   +E   + +++ +
Sbjct: 1   MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              LL   L+++   + +E    LQ+ K ++E +    LL    D ND     LE+   A
Sbjct: 61  TKELLGEKLDDEMREMAKEEFAELQKEKADLEERL--KLLLVPKDPNDDKNVILEIRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E 
Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYEN 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNT
Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           T SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+
Sbjct: 238 TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYD 278


>gi|159899315|ref|YP_001545562.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892354|gb|ABX05434.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 365

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 139/247 (56%), Gaps = 10/247 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+  G GG E+  +   + RMY R+AE R +KTE + + +    G K     +
Sbjct: 110 DEKNVIIEIRQGEGGDEAALFGADVYRMYQRYAEIRGWKTEVMSLSENGIGGFKEVIFEV 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G  A+  LK E GVHR+ R+   ++  R HTS  ++ V P V+++  +EI + D RID 
Sbjct: 170 QGQGAWSRLKYEGGVHRVQRVPATEARGRIHTSTITVAVLPEVEETA-VEIKQEDYRIDV 228

Query: 233 YRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           YR+ G GGQ VNTTDSAVRI +    P  +VV CQ  RSQ KN+  A N+LRA+LY  E 
Sbjct: 229 YRSGGHGGQGVNTTDSAVRIVYKAGTPEEIVVVCQDTRSQIKNRESALNVLRARLYAREQ 288

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +KR++   +GES   ++G G    ++R+Y   P   + D R     ++   VLDG LD  
Sbjct: 289 EKRQK--ELGESRLAQVGSGERAEKMRTYNY-PQDRITDHRIGQNISNLPVVLDGALDRL 345

Query: 347 MKATLAI 353
           + A +  
Sbjct: 346 IDALVTF 352


>gi|318042535|ref|ZP_07974491.1| peptide chain release factor 1 [Synechococcus sp. CB0101]
          Length = 365

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 168/351 (47%), Gaps = 27/351 (7%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D A      L  +  DP +  N  + + + RER  L+  +    E+Q          EL 
Sbjct: 11  DAARTTFDTLERQLADPDVAANPAQLEPIARERARLEPLVMGYDELQTLQGQEQQARELL 70

Query: 77  LEED---DCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E     D   L  +E ++   RI    E      L     D     LE+ AGAGG E+ 
Sbjct: 71  RESRGDLDLEALAQEELAELATRISALEEQLTLALLPRDPRDERSVMLEIRAGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L RMY R+A+   +K + +   + E  G K   L IKG   +  LK E GVHR+ 
Sbjct: 131 LWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIKGDGVFSQLKFEAGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D +E++I   D  I T R+ GAGGQ+VN  ++AV 
Sbjct: 191 RVPATESQGRVHTSTATVAVMPEA-DPVEVQIDPGDLEISTARSGGAGGQNVNKVETAVD 249

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL------QKREEIANIGESSKTE 305
           + H PTG+ V C QERSQ +N+ +A  +LRAKLYE EL      ++   +A +G   ++E
Sbjct: 250 LLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELATANAEERSARLAQVGTGDRSE 309

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
                +IR+Y        KD RT   +     S   VL G L + + A ++
Sbjct: 310 -----KIRTY------NYKDNRTTDHRLGRNFSLEPVLQGQLAELIGACVS 349


>gi|147818957|emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 40/248 (16%)

Query: 111  EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
            EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K E ++I + +  G K A+ 
Sbjct: 1313 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASG 1372

Query: 171  LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
             I G   YG LK E G+HR+                            +++++   D RI
Sbjct: 1373 AISGSGVYGKLKFESGIHRV---------------------------QVDVQLRNEDLRI 1405

Query: 231  DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-- 288
            DTYR+ G+GGQH NTT+SAVRITHIP+G+ V  Q ERSQH NKA+A  +L AKLYE+E  
Sbjct: 1406 DTYRSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERS 1465

Query: 289  -LQK---REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DL 343
             +QK   +  +  IG   ++E     +IR+Y   P   V D R  I   S +DV+ G +L
Sbjct: 1466 RIQKDRSKLRMEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENL 1519

Query: 344  DDFMKATL 351
            D F+ A L
Sbjct: 1520 DVFIDALL 1527


>gi|195116636|ref|XP_002002858.1| GI17608 [Drosophila mojavensis]
 gi|193913433|gb|EDW12300.1| GI17608 [Drosophila mojavensis]
          Length = 393

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 141/248 (56%), Gaps = 11/248 (4%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVHAGAGGT 128
           LA +++D   L E  +N+    L    KQ E +L      S + D      EV+AGAGG 
Sbjct: 85  LAEKDEDMRALMEEENNVYTSLLR---KQEEDMLQELLALSDDEDYPAVIFEVNAGAGGQ 141

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L  MYT + +   ++ E  +    +  G++ A L +  P AY WL+ E GVH
Sbjct: 142 EAMLFAQELYDMYTSYFDHMGWEYEEFDRETTDIGGLRHANLQVNDPEAYNWLRFEAGVH 201

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   + + R HTS +SI V P   D ++++I+E D +I+T RASGAGGQHVNTTDS
Sbjct: 202 RVQRVPATEKSGRIHTSTASITVIPRPAD-VQVQIAERDLKIETKRASGAGGQHVNTTDS 260

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIG 307
           AVRI H+P+G+ V+ Q ERSQ KN+  A   L+AKL   +LQ  E       ++ +  + 
Sbjct: 261 AVRIVHLPSGLAVESQSERSQLKNREVALKRLQAKLIHQQLQSAEATKKATRKAQQGNLN 320

Query: 308 WGRQIRSY 315
              +IR+Y
Sbjct: 321 RNEKIRTY 328


>gi|296111565|ref|YP_003621947.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
 gi|295833097|gb|ADG40978.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
          Length = 357

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 182/345 (52%), Gaps = 30/345 (8%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-------FIKEIQDR--LCDNL 70
           V R   LN +  DP +  +  +   L++E   + + ++        I+EIQD   + D+ 
Sbjct: 12  VDRYDELNEQLADPEVAGDGQKYMALLKEAGEMRDTVAAYTRYKQVIQEIQDAEDMLDDD 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127
            L  LA +ED  ++  E SD      LE + K    +L    D ND     +E+   AGG
Sbjct: 72  ELAPLA-KEDLNTLRPEKSD------LEAQLK----ILMLPKDPNDDKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G 
Sbjct: 121 DESSLFAADLLDMYRRYAEKQRWALSIIDETTTEVGGYKEVAIMISGDNVYSKLKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN   
Sbjct: 181 HRVQRVPSTETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNKVS 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVR+ H PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E  A   E  K+ +G
Sbjct: 240 TAVRLVHKPTGMMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AEYAEKRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            G    +IR+Y   P   V D R  +       +++GDL + + A
Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGDLGEIIDA 341


>gi|71028468|ref|XP_763877.1| peptide chain release factor 2 [Theileria parva strain Muguga]
 gi|68350831|gb|EAN31594.1| peptide chain release factor 2, putative [Theileria parva]
          Length = 376

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 135/249 (54%), Gaps = 18/249 (7%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE----------KRKFKTEALEIHDGEE 162
           D N   L + +G GG+ES DW  +L  MY ++                + + +++  G  
Sbjct: 83  DRNYCKLIIKSGVGGSESFDWCRILAEMYKKFISSYDPPPGPNLPTSLRLKEVDVCPGTS 142

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-- 220
            G +     + G  AY  LKGE G HRL+R SP++S+ +R T+F+++   P++ D+ E  
Sbjct: 143 GGFRRVEYDVIGDYAYRLLKGENGTHRLIRNSPFNSDHKRQTTFATVQAVPILSDTDEEI 202

Query: 221 ------IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
                  +I + D  I++ R+SG GGQ+VN  ++AVR+ H PTG+ V+ QQER+  +N+ 
Sbjct: 203 INFKKNRQILKKDLIIESMRSSGKGGQNVNKVETAVRVYHKPTGLSVKVQQERTNTQNRE 262

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML   + E  L+K  E  +  + +     WG  IR+Y L P Q VKD RTN E   
Sbjct: 263 IAIRMLTKLVDEHYLKKLNEKLDDIKGADLVGTWGSHIRTYTLNPEQRVKDHRTNFETAK 322

Query: 335 PSDVLDGDL 343
            ++VL+GDL
Sbjct: 323 ATNVLNGDL 331


>gi|40062727|gb|AAR37632.1| peptide chain release factor 1, degenerate [uncultured marine
           bacterium 438]
          Length = 358

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 139/247 (56%), Gaps = 6/247 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  +A +E+ AG GG E+  +A  L +MY + + ++K++ E + +   E  G+K    
Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIA 164

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I+G N Y  LK E G     + S Y ++    T     W      + ++I+I++SD RI
Sbjct: 165 SIRGKNIYSTLKYESGSSSCSKSSRYRNSREEFTLLQQQWAVLPEAEEVDIKINDSDLRI 224

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D +RA G GGQ VNTTDSAVRITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  
Sbjct: 225 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERS 284

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E      E  K++IG G    +IR+Y   P   V D R N+        L+G+  D M
Sbjct: 285 RIE--GERSEDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEM 341

Query: 348 KATLAIK 354
             +L ++
Sbjct: 342 VESLTLQ 348


>gi|281491061|ref|YP_003353041.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           KF147]
 gi|281374819|gb|ADA64339.1| Peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           lactis KF147]
          Length = 357

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++     K++ + + D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLCDKVATYNDYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122
           +  +L E  L++D   +L+E  +S   Q+  LE E K    +L    D ND     LE+ 
Sbjct: 61  SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIK----ILLLPKDPNDGKNIILEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK
Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   ++  R HTS +++ V P V++  E+ I + D R+D Y ASGAGGQ+
Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIDQKDLRVDIYHASGAGGQN 235

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296
           VN   +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K++      EL+ Q  E  +
Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKS 295

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +G   ++E     +IR+Y   P   V D R  +       +L G +D+ + A + 
Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345


>gi|33866628|ref|NP_898187.1| peptide chain release factor 1 [Synechococcus sp. WH 8102]
 gi|46576726|sp|Q7U4H2|RF1_SYNPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33633406|emb|CAE08611.1| peptide chain release factor RF-1 [Synechococcus sp. WH 8102]
          Length = 365

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 25/344 (7%)

Query: 24  SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ----DRLCDNLILLEL-- 75
           SF N + +  DP +  +    + + RER  L+  +   +E+Q    ++     +L E   
Sbjct: 16  SFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLEGEQKQSRELLKECRG 75

Query: 76  --ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132
             A+EE    + Q+   +L R   E+  K   +LL  +  D     LE+ AGAGG E+  
Sbjct: 76  DAAMEE----LAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEIRAGAGGDEACI 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  L RMY R+++K  +  + +  ++ +  G +   L +KG + +  LK E GVHR+ R
Sbjct: 132 WAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQLKFEAGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV +
Sbjct: 192 VPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLEISTARSGGAGGQNVNKVETAVDL 250

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H P+G+ V C QERSQ +N+ +A  +LRAKL  LE ++RE  A      + ++G G   
Sbjct: 251 LHKPSGIRVFCTQERSQLQNRERALEILRAKL--LEQEQREAAARESSDRRAQVGSGD-- 306

Query: 313 RSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
           RS  ++ Y   KD RT   +     S   VLDG L+D + A +A
Sbjct: 307 RSEKIRTYNY-KDNRTTDHRLGRNFSLDPVLDGQLEDLIGACIA 349


>gi|88855314|ref|ZP_01129978.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
 gi|88815221|gb|EAR25079.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
          Length = 359

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 145/248 (58%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS D  +E+  G GG ES  +A  LLRMY  +AE +K+KTE +E    +  GIK   L +
Sbjct: 100 DSRDVIMEIKMGEGGAESALFAGDLLRMYLHYAESKKWKTEIIEQTSSDLGGIKDVQLAV 159

Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG    P    W  LK E GVHR+ R+   +S  R HTS + + V+P VD+  E+EIS++
Sbjct: 160 KGNSSDPAEGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEISQN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L   + E  A   E  K++I       +IR+Y   P   + D RT  +  +    ++G L
Sbjct: 278 LARYQEEADAEASEYRKSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDQAINGAL 336

Query: 344 DDFMKATL 351
           +  +++ +
Sbjct: 337 EPVIQSCI 344


>gi|37523990|ref|NP_927367.1| peptide chain release factor 1 [Gloeobacter violaceus PCC 7421]
 gi|46576716|sp|Q7ND15|RF1_GLOVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|35214996|dbj|BAC92362.1| translation releasing factor RF-1 [Gloeobacter violaceus PCC 7421]
          Length = 364

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 184/336 (54%), Gaps = 16/336 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+  DP L  N  E   ++R R  L+  +      Q RLC     +   + ++    L
Sbjct: 21  LTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQ-RLCAERNAVRQMIRDEQDPEL 79

Query: 86  QETSDNLQRIKLEVEYKQFE---SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLR 139
           +E ++  +   LE    + E   +LL    D ND     LE+ AG GG E+  +A  L+R
Sbjct: 80  RELAEE-EHTGLEERIARLEDEITLLLLPRDPNDDKNVMLEIRAGTGGDEAAIFAGDLMR 138

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+AE + +  +       E  G K   L I+G + Y  LK E GVHR+ R+   ++ 
Sbjct: 139 MYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSKLKFEAGVHRVQRVPVTETQ 198

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P V++ +++EI+ +D  I T R+ GAGGQ+VN  ++AV + H P+G+
Sbjct: 199 GRVHTSTATVAIMPEVEE-VDVEINPNDIEITTTRSGGAGGQNVNKVETAVHLVHKPSGI 257

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + CQ+ERSQ +NKA+A  +LR KLY  ++++RE+   +    ++++G G    +IR+Y 
Sbjct: 258 HIHCQEERSQLQNKARAMQILRVKLY--DIKQREQHEQVSGLRRSQVGTGDRSEKIRTYN 315

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +  + V D R + +  + +  ++G+++  +++ +A
Sbjct: 316 YKDNR-VTDHRLS-QNFTLNTAIEGEIETLIQSAIA 349


>gi|239917332|ref|YP_002956890.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|281414188|ref|ZP_06245930.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|239838539|gb|ACS30336.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
          Length = 369

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/250 (38%), Positives = 143/250 (57%), Gaps = 12/250 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  LE+  G GG E+  +A  LLRMY R+A+ R +KTE L     +  G K   + +
Sbjct: 110 DARDVILEIKGGEGGEEAALFAGDLLRMYLRYADSRGWKTEVLSATHSDLGGYKDVHVAV 169

Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +G  A      Y  LK E GVHR+ R+   +S  R HTS + + V P VD   E+ +  +
Sbjct: 170 RGSAADPADGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPN 229

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+  A  +LR++L  
Sbjct: 230 DLKVDVFRSSGPGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRL-- 287

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           LE Q+ E+ A    +   ++       +IR+Y   P   + D RT  +  +   VLDGDL
Sbjct: 288 LERQRAEQDAEDSAARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDL 346

Query: 344 DDFMKATLAI 353
           +  + + LA+
Sbjct: 347 EAVIASCLAL 356


>gi|73989054|ref|XP_848713.1| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 2 [Canis familiaris]
          Length = 444

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/318 (36%), Positives = 165/318 (51%), Gaps = 37/318 (11%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQ---------DRLCDNLI------LLELALE 78
           HL  N  + K L R    L    +  +EIQ         D +C +L       L ELALE
Sbjct: 94  HLSVNEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALE 153

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWA 134
           E      Q  ++     K+ V Y + F+SL+  E  D ND  +EV +G   GG   Q + 
Sbjct: 154 ER-----QTIAE-----KINVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFT 203

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             +  MY  ++  + +K E L     +  G+  A   I G N Y  LK E GVHR+ RI 
Sbjct: 204 REIFDMYQNYSSYKNWKFELLNYTPADYGGLHHAAARISGDNVYKHLKYEGGVHRVQRIP 263

Query: 195 PYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
               ++R    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVNTTDSAVR
Sbjct: 264 EVGLSARMQRIHTGTMSVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVR 322

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K        + S  ++  G +
Sbjct: 323 LVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEK----DKCQQQSTRKLQVGTR 378

Query: 312 IRSYVLQPYQMVKDLRTN 329
            +S  ++ Y   +D  T+
Sbjct: 379 AQSERIRTYNFTQDRVTD 396


>gi|115486501|ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|77552370|gb|ABA95167.1| Peptide chain release factor 1, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|215686469|dbj|BAG87730.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694739|dbj|BAG89930.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186139|gb|EEC68566.1| hypothetical protein OsI_36894 [Oryza sativa Indica Group]
 gi|222616368|gb|EEE52500.1| hypothetical protein OsJ_34701 [Oryza sativa Japonica Group]
          Length = 416

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 168/300 (56%), Gaps = 15/300 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDC 82
           ++ +  DP +  +  E + L +    LD  +S  ++ +D  C+  I     L+   EDD 
Sbjct: 68  MSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFKD--CEKQIEETKVLQKENEDDP 125

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEA----DSNDAYLEVHAGAGGTESQDWANMLL 138
            + +     ++ +  ++E  + +  L        D+ +  LEV AGAGG E+  WA  L+
Sbjct: 126 DMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNILLEVRAGAGGDEAGIWAGDLV 185

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY ++ E+  +K + +   + E+ G K+  + +KG   Y  LK E GVHR+ R+   ++
Sbjct: 186 RMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTET 245

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ + P  D+ +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG
Sbjct: 246 MGRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTG 304

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + + C +ERSQ +N+ +A+ +LRAKLYE++L++++E  +I    K ++G G    +IR+Y
Sbjct: 305 IRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SIRNQRKLQVGTGARSEKIRTY 362


>gi|294786650|ref|ZP_06751904.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315226253|ref|ZP_07868041.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
 gi|294485483|gb|EFG33117.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315120385|gb|EFT83517.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
          Length = 366

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 140/240 (58%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK------ 166
           D+ D  +E+ AGAGG E+  +A  LLRMYTR+AEKR + TE +  +  E  G+K      
Sbjct: 105 DARDTIMEIKAGAGGEEAALFAGDLLRMYTRYAEKRSWSTEIMSQNMTELGGVKDIQIAF 164

Query: 167 -SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
            S  ++      +  LK E GVHR+ RI   +S  R  TS + + V+P   DD  EIE+ 
Sbjct: 165 RSKGVVAPADGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADDDDDEIEVD 224

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+THIPTG+VV  Q E+SQ +N+  A  +L+++L
Sbjct: 225 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRQAALRVLKSRL 284

Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++ ++  +E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 285 LAMKHEEEAQEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 343


>gi|125623422|ref|YP_001031905.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223566|sp|A2RIR4|RF1_LACLM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124492230|emb|CAL97159.1| peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070169|gb|ADJ59569.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 357

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++     K++ + + D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122
           +  +L E  L+++   +L+E  +S   Q+  LE E K    +L    D ND     LE+ 
Sbjct: 61  SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIK----ILLLPKDPNDGKNIILEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK
Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   ++  R HTS +++ V P V++  E+ I + D R+D Y ASGAGGQ+
Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIEQKDLRVDIYHASGAGGQN 235

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296
           VN   +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K++      EL+ Q  E  +
Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNTERKS 295

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +G   ++E     +IR+Y   P   V D R  +       +L G +D+ + A + 
Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345


>gi|88807914|ref|ZP_01123425.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
 gi|88787953|gb|EAR19109.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
          Length = 365

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 174/346 (50%), Gaps = 25/346 (7%)

Query: 22  RLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           R SF N + +  DP +  +    + + RER  L+  ++    +Q    +     EL  + 
Sbjct: 14  RDSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYTSLQSVQAEREQARELLRD- 72

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLL---------SGEADSNDAYLEVHAGAGGTES 130
              S   E   NL +++LE   K+ E L+             D     LE+ AGAGG E+
Sbjct: 73  ---SRGDEEMANLAQLELEELDKRHEVLIQRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R++ +R +  + +   + +  G K   L +KG + +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGDSVFSELKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P  D  +E++I  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
            + H P+G+ V C QERSQ +N+ +A  +LRAKLYE +L +    AN  ESS      G 
Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAE----ANARESSARRAQVGT 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
             RS  ++ Y   KD R    +     S   VL G ++D + A +A
Sbjct: 305 GDRSEKIRTYN-AKDNRVTDHRLGRNFSLDPVLQGQMEDVIGACIA 349


>gi|72382938|ref|YP_292293.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL2A]
 gi|119361577|sp|Q46IT8|RF1_PROMT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72002788|gb|AAZ58590.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. NATL2A]
          Length = 365

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 193/357 (54%), Gaps = 26/357 (7%)

Query: 14  FDWDNAVQRL-----SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAIS-FIK-EIQD 64
            D    ++RL     SF N + +  DP +  +  + + + RER  L+  ++ ++K +I +
Sbjct: 1   MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60

Query: 65  RLC-DNLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEV 121
           + C +   L++ + ++ +  +L +E   NL+  K E+  K   +LL  +  D     LE+
Sbjct: 61  KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  WA  L RMY R+ +K  +  + +   + +  G +   + +KG + Y  L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS +++ V P  D  +E++I  +D  I T R+ GAGGQ
Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEAD-PVEVKIESTDLEISTARSGGAGGQ 239

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++A+ + H P+G+ V C QERSQ +N+ +A  +LRAKL ELEL +    AN  E 
Sbjct: 240 NVNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELELAE----ANAKER 295

Query: 302 SK--TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352
           S   +++G G   RS  ++ Y   KD RT   +   +     VL G L+D + A +A
Sbjct: 296 SARLSQVGTGD--RSEKIRTYNY-KDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIA 349


>gi|261749210|ref|YP_003256895.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497302|gb|ACX83752.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 364

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 142/241 (58%), Gaps = 6/241 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +A +E+ +G GG E+  +   +LRMY  + ++  +K + +    G   G K   L
Sbjct: 116 ENDHRNAIVELRSGTGGDEACLFVEDILRMYIMYFKQVGWKYKIIHAQKGGIQGYKEIIL 175

Query: 171 LI---KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
            +   +G   YG LK E GVHR+ RI   +S  R HTS  ++ V P + D IE++I  SD
Sbjct: 176 DVSGKEGEGVYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLPEIKD-IEMKIHLSD 234

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            + DT+R+SG+GGQHVN T+SAVR+THIPT + V+CQ+ERSQHKN  +A N+LR+++Y+ 
Sbjct: 235 IKKDTFRSSGSGGQHVNKTESAVRLTHIPTKITVECQEERSQHKNFEKAMNVLRSRIYQN 294

Query: 288 ELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           E +KR +  +I   S    G    +IR+Y   P   V D R +    +    ++G++ + 
Sbjct: 295 EKEKRFKERSIKRKSLVSTGDRSVKIRTYNY-PKGRVTDHRIHKSIYNLVGFMNGNIQEM 353

Query: 347 M 347
           +
Sbjct: 354 I 354


>gi|116511384|ref|YP_808600.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123125765|sp|Q031E4|RF1_LACLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116107038|gb|ABJ72178.1| bacterial peptide chain release factor 1 (bRF-1) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 357

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 27/356 (7%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++     K++ + + D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122
           +  +L E  L+++   +L+E  +S   Q+  LE E K    +L    D ND     LE+ 
Sbjct: 61  SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIK----ILLLPKDPNDGKNIILEIR 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK
Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   ++  R HTS +++ V P V++  E+ I + D R+D Y ASGAGGQ+
Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIEQKDLRVDIYHASGAGGQN 235

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296
           VN   +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K++      EL+ Q  E  +
Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKS 295

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +G   ++E     +IR+Y   P   V D R  +       +L G +D+ + A + 
Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345


>gi|149730260|ref|XP_001492759.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Equus caballus]
          Length = 446

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/324 (36%), Positives = 174/324 (53%), Gaps = 34/324 (10%)

Query: 45  LMRERQHLDNAISFIKEIQDRLC--DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + RE Q  + AI  ++ +   L   D   L ELALEE   ++ Q         KL   Y+
Sbjct: 120 IYREIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQ-TVAQ---------KLNALYR 169

Query: 103 Q-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           + F+SL+  E  D ND  LEV +G   GG   Q +   +  MY  ++  +++K E L   
Sbjct: 170 ELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKRWKFELLNYT 229

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215
             +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  
Sbjct: 230 PADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP 289

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D+ +++++   D RIDT+RA GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ KNK  
Sbjct: 290 DE-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIKNKEI 348

Query: 276 AWNMLRAKLYE--LELQKREEIA----NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           A  +LRA+LY+  +E  KR++ +     +G  +++E     +IR+Y       V D R  
Sbjct: 349 ALRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSE-----RIRTYNFTQ-DRVTDHRIA 402

Query: 330 IEKTSPSDVLDGD--LDDFMKATL 351
            E  +  + L G+  LD  ++  L
Sbjct: 403 YEVRNIKEFLHGEKCLDHLIQRLL 426


>gi|301617313|ref|XP_002938091.1| PREDICTED: LOW QUALITY PROTEIN: peptide chain release factor 1,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 446

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 108/288 (37%), Positives = 155/288 (53%), Gaps = 24/288 (8%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG--AGGT 128
           +L LALEE +         N+ +++     K  ++LL  E  D NDA LEV +G   GG 
Sbjct: 148 MLALALEEKNT-----LKQNINKLR----GKLLQALLPHEKYDMNDAVLEVTSGRTTGGD 198

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
             Q +   +  MY  +A  + +  E L     E  G+  A   I G   Y  LK E G H
Sbjct: 199 ICQQFTKEIFDMYQNYAYYKSWSFEILNYSPAEYGGLHHAAARISGEGVYKRLKYEGGTH 258

Query: 189 RLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           R+ RI     +SR    HT   ++ V P  D+ +E++I   D RIDT+R+ GAGGQHVNT
Sbjct: 259 RVQRIPEVGLSSRMQRIHTGTMTVIVLPQPDE-VEVKIDSKDLRIDTFRSKGAGGQHVNT 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRI HIPTG+ V+CQQERSQ  NK +A  +LR +LYE  ++  +E+     + K +
Sbjct: 318 TDSAVRIVHIPTGIAVECQQERSQIANKEKALRILRMRLYEQTVE--QELLERRSARKLQ 375

Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMK 348
           +G   Q   IR+Y     ++  D R + E  +  + L+G+  LDD ++
Sbjct: 376 VGTRAQSERIRTYNFTQDRLT-DHRIHYEVRNIKEFLNGEELLDDLIQ 422


>gi|301760227|ref|XP_002915915.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281349098|gb|EFB24682.1| hypothetical protein PANDA_003948 [Ailuropoda melanoleuca]
          Length = 445

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 159/293 (54%), Gaps = 29/293 (9%)

Query: 50  QHLDNAISFIKEIQDRLCDNL------ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           Q +  A   I+E+ D +C +L       L ELALEE   +I Q         K+ + Y +
Sbjct: 121 QEIQEAEQAIEEL-DSMCKSLNKQDEKQLQELALEERQ-TIAQ---------KINMLYSE 169

Query: 104 -FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
            F+SL+  E  D ND  LEV AG   GG   Q +   +  MY  ++  + +K E L    
Sbjct: 170 LFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELLNYTP 229

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVD 216
            +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  D
Sbjct: 230 ADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPD 289

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A
Sbjct: 290 E-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIA 348

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             +LRA+LY+  ++K        + S  ++  G + +S  ++ Y   +D  T+
Sbjct: 349 LRVLRARLYQQIIEK----DKCQQQSTRKLQVGTRAQSERIRTYNFTQDRVTD 397


>gi|257058120|ref|YP_003136008.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
 gi|256588286|gb|ACU99172.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
          Length = 370

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 146/243 (60%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE +K+  + +     +  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +E++I   D  I T
Sbjct: 172 QGDRVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDAKDIEITT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + + P G+ + C +ERSQ +N+ +A  +LRAKLYEL+L  R
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYELKL--R 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    K+++G G    +IR+Y  +  + V D R   +  S +  L+GD+++ +++
Sbjct: 289 EQQDAVSSMRKSQVGTGARSEKIRTYNYKDNR-VTDHRLG-QNFSLAGTLEGDIEEIIQS 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|164424709|ref|XP_960901.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
 gi|157070629|gb|EAA31665.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
          Length = 415

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 28/292 (9%)

Query: 77  LEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD 132
           LE DD  + Q  +D+L   K  LE       + L+ +    D    +E+H G GGTE + 
Sbjct: 79  LESDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRH 138

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGE 184
           +A+ L RMY R+ E + +    +   + E        E  I  A L +  P A+   +GE
Sbjct: 139 FADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGE 198

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPV-----VDDSIEIEISESDCRIDT------- 232
            G+HR+ RI   +   R HTS  ++WV P       D   +    ESD  +D        
Sbjct: 199 AGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEK 258

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++  L  ++R
Sbjct: 259 MRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQR 318

Query: 293 EEIA-NIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           E  A ++ +S  S++++  G +IR+Y  Q      D R+ ++  +  +VL G
Sbjct: 319 EAQAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 369


>gi|3328106|gb|AAD12759.1| translational release factor 1 [Homo sapiens]
          Length = 445

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/287 (39%), Positives = 159/287 (55%), Gaps = 33/287 (11%)

Query: 45  LMRERQHLDNAI----SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           + +E Q  + AI    S  K +  R  D   LLELALEE      ++T D     K+ + 
Sbjct: 119 IYQETQETEQAIEELGSMCKSLNKR--DEKQLLELALEE------RQTIDQ----KINML 166

Query: 101 YKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           Y + F+SL+  E  D ND  LEV AG   GG   Q +   +  MY  ++  + ++ E L 
Sbjct: 167 YNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEPLN 226

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYP 213
               +  G+  A   I G   Y  LK E G+HR+ RI     +SR    HT   S+ V P
Sbjct: 227 YTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLP 286

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D+ +++++   D RIDT+RA GAGGQHVN TDSAVR+ HIPTG+VV+CQQERSQ KNK
Sbjct: 287 QPDE-VDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNK 345

Query: 274 AQAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWGRQ---IRSY 315
             A+ +LRA+LY+  +E  KR++ +    + K ++G   Q   IR+Y
Sbjct: 346 EIAFRVLRARLYQQIIEKDKRQQQS----ARKLQVGTRAQSERIRTY 388


>gi|28950278|emb|CAD71246.1| related to translation releasing factor RF-1, mitochondrial
           [Neurospora crassa]
          Length = 430

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 28/292 (9%)

Query: 77  LEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD 132
           LE DD  + Q  +D+L   K  LE       + L+ +    D    +E+H G GGTE + 
Sbjct: 94  LESDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRH 153

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGE 184
           +A+ L RMY R+ E + +    +   + E        E  I  A L +  P A+   +GE
Sbjct: 154 FADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGE 213

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPV-----VDDSIEIEISESDCRIDT------- 232
            G+HR+ RI   +   R HTS  ++WV P       D   +    ESD  +D        
Sbjct: 214 AGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEK 273

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++  L  ++R
Sbjct: 274 MRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQR 333

Query: 293 EEIA-NIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           E  A ++ +S  S++++  G +IR+Y  Q      D R+ ++  +  +VL G
Sbjct: 334 EAQAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 384


>gi|213026460|ref|ZP_03340907.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 201

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 6/202 (2%)

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R+++ E + + +GE  G K     I G   YG LK E G HR+ R+   +S  R HTS
Sbjct: 1   EARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 60

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ 
Sbjct: 61  ACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQM 322
           ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G +    R+Y   P   
Sbjct: 121 ERSQHKNKAKALSVLGARIHAAETAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGR 177

Query: 323 VKDLRTNIEKTSPSDVLDGDLD 344
           V D R N+      + ++G LD
Sbjct: 178 VTDHRINLTLYRLDETMEGKLD 199


>gi|78042486|ref|NP_001030185.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
 gi|118573310|sp|Q3MHI7|RF1M_BOVIN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|75773697|gb|AAI05225.1| Mitochondrial translational release factor 1 [Bos taurus]
 gi|296481791|gb|DAA23906.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
          Length = 447

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/265 (39%), Positives = 147/265 (55%), Gaps = 22/265 (8%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE   +I Q         K+ + Y + F+SLL  E  D ND  LEV +G   GG
Sbjct: 150 LQELALEERQ-TIAQ---------KINMLYSELFQSLLPKEKYDKNDVILEVTSGRTTGG 199

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G N Y  LK E G+
Sbjct: 200 DICQQFTREIFDMYQNYSSYKHWRFELLNYTPADYGGLHHAAARISGDNVYKHLKYEGGI 259

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 260 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPHPDE-VDVKVDPKDLRIDTFRAKGAGGQHVN 318

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K        + S  
Sbjct: 319 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEK----DKCQQRSAR 374

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTN 329
           ++  G + +S  ++ Y   +D  T+
Sbjct: 375 KLQVGTRAQSERIRTYNFTQDRVTD 399


>gi|194761148|ref|XP_001962794.1| GF14253 [Drosophila ananassae]
 gi|190616491|gb|EDV32015.1| GF14253 [Drosophila ananassae]
          Length = 392

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 151/253 (59%), Gaps = 18/253 (7%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS---GEADSNDAY----LEVHAGA 125
           +EL  +ED  S++QE +     I  ++  KQ ++LL      AD ++ Y      ++AGA
Sbjct: 85  MELEKDEDMRSLMQEENA----IYTDLLSKQEQTLLRELLAMAD-DEVYPALIFGINAGA 139

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L  MYT + E + +  E       +  GI+ A++++ G +A+ WL+ E 
Sbjct: 140 GGQEAMLFAQELYEMYTNYFEHKGWDYEEFAHETTDIGGIRHASIMVSGEDAFTWLRHEA 199

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   + + R HTS +SI V P   D +++ I++ D +I+T RASGAGGQHVNT
Sbjct: 200 GVHRVQRVPATEKSGRMHTSTASITVIPRPAD-VQVHIADKDLKIETKRASGAGGQHVNT 258

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRI H+PTG+ V+ Q ERSQ KN+  A + LR++L + +L+  E  A+   + K +
Sbjct: 259 TDSAVRIVHLPTGLAVEAQSERSQLKNRELAMSRLRSRLVQRQLESAE--ASTKATKKAQ 316

Query: 306 IG---WGRQIRSY 315
            G      +IR+Y
Sbjct: 317 QGSLNRNEKIRTY 329


>gi|330919897|ref|XP_003298803.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
 gi|311327840|gb|EFQ93110.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
          Length = 416

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/252 (38%), Positives = 145/252 (57%), Gaps = 22/252 (8%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGIK--SATLLIK 173
           LE+  GAGG+E+  +A  L RMY+ +  +  F+T  ++   I+   EAG+    A + ++
Sbjct: 145 LEIRPGAGGSEAAIFAGDLFRMYSAFCNRNGFRTNLIKYENINGTSEAGVPLSEAIMEVE 204

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI----EIEISESDCR 229
             NAYG  + E GVHR+ R+   ++  R HTS +S+ V P + ++     + +  ESD  
Sbjct: 205 NENAYGVFRCEAGVHRVQRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYY 264

Query: 230 ID-------TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ID         RASGAGGQHVN T+SAVR+THIPT  VV  Q  RSQHKNK +AW +LRA
Sbjct: 265 IDPKEVKLEVMRASGAGGQHVNKTESAVRLTHIPTNTVVAMQDSRSQHKNKEKAWALLRA 324

Query: 283 KLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++ +   +KR EE+AN+  S     ++G G ++R+Y     Q V D R+ +      DV+
Sbjct: 325 RIAQTRREKREEEMANMRRSVIGVAKMGRGDKVRTYNWG-QQRVTDHRSGMTVHDLDDVM 383

Query: 340 DG--DLDDFMKA 349
            G   LD  M++
Sbjct: 384 GGGQTLDKVMES 395


>gi|163787722|ref|ZP_02182169.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
 gi|159877610|gb|EDP71667.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
          Length = 358

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 148/262 (56%), Gaps = 10/262 (3%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L E  D +++++ E+   +F  +     D+ +  +EV AG GG E+  +A  L RMY+++
Sbjct: 81  LDEAKDTIEKLEEEI---RFMLIPKDPDDAKNVVVEVRAGTGGDEASIFAGDLFRMYSKY 137

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
              + ++ + +   DG   G K     + G + YG LK E GVHR+ R+   ++  R HT
Sbjct: 138 CSDKGWRVDVVSQSDGTSGGFKEVIFEVSGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 197

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P  ++  + E+  ++ RI+   ++G GGQ VNTT SA+++ H PTG++V CQ
Sbjct: 198 SAATVMVLPEAEE-FDYELDMTEVRIERTTSTGPGGQSVNTTYSAIKLHHEPTGMIVSCQ 256

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
            ++S HKN  +A  +LR++LYE EL KR+  A   E  K+ +  G    +IR+Y   P  
Sbjct: 257 DQKSSHKNLEKALKVLRSRLYERELAKRQ--AADSEKRKSMVSSGDRSAKIRTYNY-PQG 313

Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343
            V D R  +     +++++GD+
Sbjct: 314 RVTDHRIGLTLYDLTNIINGDI 335


>gi|148238741|ref|YP_001224128.1| peptide chain release factor 1 [Synechococcus sp. WH 7803]
 gi|166223613|sp|A5GIR6|RF1_SYNPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147847280|emb|CAK22831.1| Peptide chain release factor 1 [Synechococcus sp. WH 7803]
          Length = 365

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/244 (37%), Positives = 135/244 (55%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AGAGG E+  WA  L RMY R++ +R +  + +   + +  G K   L +
Sbjct: 112 DERSVMLEIRAGAGGDEACLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + +  LK E GVHR+ R+   +S  R HTS +++ V P  D  +E++I  +D  I T
Sbjct: 172 KGESVFSELKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQIEPADLEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H P+G+ V C QERSQ +N+ +A  +LRAKLYE +L + 
Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAE- 289

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348
              AN  ESS      G   RS  ++ Y   KD R    +     S   VL G ++D + 
Sbjct: 290 ---ANARESSARRAQVGTGDRSEKIRTYN-AKDNRVTDHRLGRNFSLDPVLQGQMEDVIG 345

Query: 349 ATLA 352
           A +A
Sbjct: 346 ACIA 349


>gi|124026680|ref|YP_001015795.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL1A]
 gi|229470356|sp|A2C4X1|RF1_PROM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123961748|gb|ABM76531.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           NATL1A]
          Length = 365

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 193/357 (54%), Gaps = 26/357 (7%)

Query: 14  FDWDNAVQRL-----SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAIS-FIK-EIQD 64
            D    ++RL     SF N + +  DP +  +  + + + RER  L+  ++ ++K +I +
Sbjct: 1   MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60

Query: 65  RLC-DNLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEV 121
           + C +   L++ + ++ +  +L +E   NL+  K E+  K   +LL  +  D     LE+
Sbjct: 61  KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  WA  L RMY R+ +K  +  + +   + +  G +   + +KG + Y  L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS +++ V P  D  +E++I  +D  I T R+ GAGGQ
Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEAD-PVEVKIESTDLEISTARSGGAGGQ 239

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++A+ + H P+G+ V C QERSQ +N+ +A  +LRAKL ELE+ +    AN  E 
Sbjct: 240 NVNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEIAE----ANAKER 295

Query: 302 SK--TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352
           S   +++G G   RS  ++ Y   KD RT   +   +     VL G L+D + A +A
Sbjct: 296 SARLSQVGTGD--RSEKIRTYNY-KDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIA 349


>gi|317968845|ref|ZP_07970235.1| peptide chain release factor 1 [Synechococcus sp. CB0205]
          Length = 367

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 177/352 (50%), Gaps = 37/352 (10%)

Query: 22  RLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD--------NLI 71
           R +F  L  +  DP +  N  + + + RER  L+  +       D+LC           +
Sbjct: 14  RTTFETLERQLADPDVAANPAQLEPIARERARLEPLVLGY----DQLCQWRKQEQEARQL 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130
           L E   +++  ++ QE    L      +E +   +LL  +  D     LE+ AGAGG E+
Sbjct: 70  LKESRGDQEMEALAQEELSGLATQIAAMEEQLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+   +K + +   + E  G K   L I+G + +  LK E GVHR+
Sbjct: 130 AIWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIQGDSVFSQLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P  D  +E++I  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVQIDPTDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL------QKREEIANIGESSKT 304
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE EL      ++   +A +G   ++
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELAEANAKERSARLAQVGSGDRS 308

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
           E     +IR+Y        KD RT   +     S   VL G L + + A ++
Sbjct: 309 E-----KIRTY------NYKDNRTTDHRLGRNFSLEPVLQGQLAELIGACVS 349


>gi|87309295|ref|ZP_01091431.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
 gi|87287934|gb|EAQ79832.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
          Length = 358

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 171/320 (53%), Gaps = 16/320 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R  FL  +  DP +  N  +   + RE   L    +  +  ++ + D +   +  LE 
Sbjct: 9   LSRFEFLEKQMSDPDVMGNSHQMATIAREHGSLAKLATKYRTFKNTI-DEMGEAKELLES 67

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-----YLEVHAGAGGTESQDWA 134
           DD  + +  + ++  +K + E K ++ LL      +DA      LE+  GAGG E+  +A
Sbjct: 68  DDEEMCELAAADIVTLKAKRE-KLWQELLDMTIGGDDANRTRIVLEIRGGAGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  MY R+AE +K+K E +E +  E  G K   + ++G   Y  L+ E G HR+ R+ 
Sbjct: 127 RDLYEMYKRYAETKKWKYEVMEANPTELGGFKEVIISVEGEGVYRELQYESGGHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA-SGAGGQHVNTTDSAVRIT 253
             ++  R HTS +++ V P  +D +E E++  D  ++ Y A SG GGQHVN T SAVR+ 
Sbjct: 187 ETEAKGRVHTSAATVAVMPEPED-VEFELNPEDYEVERYAASSGPGGQHVNKTASAVRLI 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H   GV+VQC +ERSQHKN A+A  +L+ KLY  E+++ EE     +  K+ +G G   +
Sbjct: 246 H-KDGVIVQCCEERSQHKNLAKALRLLKTKLY--EVKRAEEEKQRSDHRKSLVGSGDRSQ 302

Query: 311 QIRSYVLQPYQMVKDLRTNI 330
           +IR+Y   P   V D R N+
Sbjct: 303 RIRTYNF-PENRVTDHRINL 321


>gi|307104974|gb|EFN53225.1| hypothetical protein CHLNCDRAFT_25946 [Chlorella variabilis]
          Length = 360

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 184/338 (54%), Gaps = 20/338 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELALEEDDC 82
           L  +  DP +  N    + L+R    + +A+   +  K+++ +L D   LL+ +  E D 
Sbjct: 20  LQERMADPEVSGNNTGYQKLVRAVSDIQDAVDGYTAYKDLERQLADAKELLKES--EGDP 77

Query: 83  SILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            + +   + ++ ++  +E +    ++  L     D  +  LEV AG GG E+  WA  L+
Sbjct: 78  EMAELAREEMEALQAAIEQQGERLKYLLLPKDPLDEKNIMLEVRAGTGGEEAALWAADLI 137

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY ++A+ + +K   +     E  G K   L I G      LK E GVHR+ R+   ++
Sbjct: 138 RMYQKYADTQGWKVSLMSESSAEAGGYKECVLQITGDR---QLKYESGVHRVQRVPATET 194

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + R HTS +++ + P VDD + ++I   D  + T RA GAGGQ+VN  ++AV + H PTG
Sbjct: 195 SGRVHTSTATVAIMPEVDD-VAVKIDPKDIALTTARAGGAGGQNVNKVETAVDLMHKPTG 253

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + + CQ+ER+Q +N+ +A  +LRAKL+ELEL+K+   + I    K+++G G    +I++Y
Sbjct: 254 IRIFCQEERTQGRNRERAMALLRAKLFELELEKQR--SEISARRKSQVGTGSRSEKIKTY 311

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +  +M  D R+ I     + V++G LD+ ++  + +
Sbjct: 312 NYKDTRM-SDHRSKI-NYDLNKVMEGALDECIQTMVML 347


>gi|163756580|ref|ZP_02163692.1| peptide chain release factor 1 [Kordia algicida OT-1]
 gi|161323474|gb|EDP94811.1| peptide chain release factor 1 [Kordia algicida OT-1]
          Length = 357

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 136/234 (58%), Gaps = 7/234 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +  +EV AG GG E+  +A  L RMYT++ E R +    ++  +G   G K     +
Sbjct: 106 DSKNVVVEVRAGTGGDEASIFAGDLHRMYTKYCEGRGWNVSVVDYSEGTSGGFKEIIFEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG +K E GVHR+ R+   ++  R HTS +++ V P  ++  ++E+  +D RI+ 
Sbjct: 166 SGEDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVELDMNDVRIER 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
             ++G GGQ VNTT SA+R+ H P+G+VV CQ ++S HKN  +A  +LR++LYE EL+K+
Sbjct: 225 TTSTGPGGQSVNTTYSAIRLHHGPSGLVVSCQDQKSSHKNLEKALKVLRSRLYEKELEKK 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             +A      K+ +  G    +IR+Y   P   V D R  +     S++++GD+
Sbjct: 285 --LAADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLSNIMNGDI 335


>gi|306833419|ref|ZP_07466546.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
 gi|304424189|gb|EFM27328.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
          Length = 359

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 147/260 (56%), Gaps = 14/260 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A+ LL+MY ++AE + +K + +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFASDLLQMYQKYAENQGWKFDVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK   +++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 ASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ IG G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQNEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 +L G LD+ + A +
Sbjct: 327 LQKLDTILSGKLDEVIDALI 346


>gi|163840178|ref|YP_001624583.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
 gi|189039986|sp|A9WNB3|RF1_RENSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|162953654|gb|ABY23169.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
          Length = 360

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/247 (39%), Positives = 144/247 (58%), Gaps = 10/247 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LEV AG GG ES  +A  L+RMY+R+AE + +K E +   + +  G K   + +
Sbjct: 100 DGRDVILEVKAGEGGDESALFAADLVRMYSRYAESKGWKIEVISATESDLGGYKDIQIAV 159

Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG         +  LK E GVHR+ R+   +S  R HTS + + V+P VD+  E+EIS++
Sbjct: 160 KGRSNDPAEGVFAALKFEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVEISQN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-- 284
           D +ID YR+SG GGQ VNTTDSAVRITH PTG+VV  Q E+SQ +N+     +LRA++  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHFPTGIVVAMQNEKSQLQNREAGMRVLRARILA 279

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++ EL   E  A + +S    +    +IR+Y   P   + D RT  +  +   V++GDL 
Sbjct: 280 HQQELIDAENSA-VRKSQIRTMDRSERIRTYNF-PENRIADHRTGYKSYNLDAVMNGDLG 337

Query: 345 DFMKATL 351
             +++ +
Sbjct: 338 PVIQSAI 344


>gi|313206514|ref|YP_004045691.1| bacterial peptide chain release factor 1 (brf-1) [Riemerella
           anatipestifer DSM 15868]
 gi|312445830|gb|ADQ82185.1| bacterial peptide chain release factor 1 (bRF-1) [Riemerella
           anatipestifer DSM 15868]
 gi|325336038|gb|ADZ12312.1| Protein chain release factor A [Riemerella anatipestifer RA-GD]
          Length = 362

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 26/306 (8%)

Query: 55  AISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SG 110
           A++ IKE  + + D  +  L++LA  E      QE  D +  I+ E++Y     LL    
Sbjct: 58  ALNAIKEADEIIADGSDKDLVDLAKMEK-----QEAIDRIPSIEEELKY-----LLIPKD 107

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSA 168
            AD  +  +E+ AG GG ES  +   + RMYT + + + +K E   + D  EA  G K  
Sbjct: 108 PADDKNVMVELRAGTGGDESAIFVEDVYRMYTMYFKSKGWKHE---VTDSNEASKGYKEL 164

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
            + ++G   YG +K E GVHR+ R+   +S  R HTS  ++ V P  ++ +++EI+ +D 
Sbjct: 165 IMRVEGDGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVEINPADI 223

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            + T R+ GAGGQ+VN  ++ V++TH PTG+VV CQQ RSQ  N+  A  MLR KLY++E
Sbjct: 224 EMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIE 283

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           LQK +   +I    KT +  G    +IR+Y   P   V D R N    +  + ++GD+ +
Sbjct: 284 LQKVQ--GDIAAQRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQE 340

Query: 346 FMKATL 351
            + A +
Sbjct: 341 MLDALI 346


>gi|315023545|gb|EFT36549.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM]
          Length = 362

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 26/306 (8%)

Query: 55  AISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SG 110
           A++ IKE  + + D  +  L++LA  E      QE  D +  I+ E++Y     LL    
Sbjct: 58  ALNAIKEADEIIADGSDKDLVDLAKMEK-----QEAIDRIPSIEEELKY-----LLIPKD 107

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSA 168
            AD  +  +E+ AG GG ES  +   + RMYT + + + +K E   + D  EA  G K  
Sbjct: 108 PADDKNVMVELRAGTGGDESAIFVEDVYRMYTMYFKSKGWKHE---VTDSNEASKGYKEL 164

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
            + ++G   YG +K E GVHR+ R+   +S  R HTS  ++ V P  ++ +++EI+ +D 
Sbjct: 165 IMRVEGDGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVEINPADI 223

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            + T R+ GAGGQ+VN  ++ V++TH PTG+VV CQQ RSQ  N+  A  MLR KLY++E
Sbjct: 224 EMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIE 283

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           LQK +   +I    KT +  G    +IR+Y   P   V D R N    +  + ++GD+ +
Sbjct: 284 LQKVQ--GDIAAQRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQE 340

Query: 346 FMKATL 351
            + A +
Sbjct: 341 MLDALI 346


>gi|255716670|ref|XP_002554616.1| KLTH0F09482p [Lachancea thermotolerans]
 gi|238935999|emb|CAR24179.1| KLTH0F09482p [Lachancea thermotolerans]
          Length = 400

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 35/312 (11%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           I  +K++QD +            +DD S+  E    +  I+ ++E K   SLL G+    
Sbjct: 85  IELLKDLQDMM------------KDDPSLRDEAQQEMAEIRPQLE-KTSSSLL-GQLLPP 130

Query: 116 DAY------LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSA 168
             +      LE+  G GG E+  +A  LL MY  +A  +++K   +     E  +GI  A
Sbjct: 131 HPFADRPCILEIRPGVGGIEAMIFAQDLLGMYINYAHNKRWKYHIISQSANESGSGIVDA 190

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEI 221
            L I  P +Y  L+ E GVHR+ RI   ++  R HTS +++ V P + +       S E 
Sbjct: 191 ILSIDEPGSYDKLRFEAGVHRVQRIPATETKGRTHTSTAAVVVLPQMAEDNEKEAESYER 250

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
                + RID  RA G GGQHVNTTDSAVR+TH P+G+V+  Q ERSQHKNKA+A+ +LR
Sbjct: 251 TFKPDEIRIDVMRARGKGGQHVNTTDSAVRLTHYPSGIVINMQNERSQHKNKAKAFAILR 310

Query: 282 AKLYELELQKREE---IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A+L E+E + +EE    A  G+ S T+     ++R+Y   P   + D R          +
Sbjct: 311 ARLAEIEQKAKEEKARAARKGQVSTTD--RSDKVRTYNF-PQNRITDHRCGFNLHDMEGI 367

Query: 339 LDGD-LDDFMKA 349
           + G+ LDD + A
Sbjct: 368 MAGERLDDVIDA 379


>gi|291393031|ref|XP_002713016.1| PREDICTED: mitochondrial translational release factor 1
           [Oryctolagus cuniculus]
          Length = 446

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 165/302 (54%), Gaps = 30/302 (9%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           ++Q ++EA+  + E + +  +++   E Q        L  LALEE      ++T D    
Sbjct: 120 IYQEILEAQQAIEELESMCKSLNTQDEKQ--------LQALALEE------RQTIDE--- 162

Query: 95  IKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKF 150
            KL + Y + F++L+  E  D ND  LEV +G   GG   Q +   +  MY  ++  + +
Sbjct: 163 -KLNMLYSELFQNLVPKEKYDKNDVILEVISGRTTGGDICQQFTREIFDMYQNYSCYKHW 221

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFS 207
           K E L     E  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   
Sbjct: 222 KFELLNYTPAEYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTM 281

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P  D+ +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQER
Sbjct: 282 SVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQER 340

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KNK  A ++LRA+LY+  ++K        + S  ++  G + +S  ++ Y   +D  
Sbjct: 341 SQIKNKEIALHVLRARLYQQIIEK----DKCQQQSARKLQVGTRAQSERIRTYNFTQDRV 396

Query: 328 TN 329
           T+
Sbjct: 397 TD 398


>gi|218245097|ref|YP_002370468.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
 gi|226739099|sp|B7K205|RF1_CYAP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218165575|gb|ACK64312.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
          Length = 370

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 146/243 (60%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE +K+  + +     +  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VDD +E++I   D  I T
Sbjct: 172 QGDRVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDAKDIEITT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + + P G+ + C +ERSQ +N+ +A  +LRAKLY+L+L  R
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKL--R 288

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E+   +    K+++G G    +IR+Y  +  + V D R   +  S +  L+GD+++ +++
Sbjct: 289 EQQDAVSSMRKSQVGTGARSEKIRTYNYKDNR-VTDHRLG-QNFSLAGTLEGDIEEIIQS 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|332241803|ref|XP_003270069.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 1
           [Nomascus leucogenys]
 gi|332241805|ref|XP_003270070.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 445

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/256 (40%), Positives = 149/256 (58%), Gaps = 27/256 (10%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SL+  E  D ND  LEV AG   GG
Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ ++++++  D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLNPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  +R++ +    + 
Sbjct: 317 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDRRQQQS----AR 372

Query: 303 KTEIGWGRQ---IRSY 315
           K ++G   Q   IR+Y
Sbjct: 373 KLQVGTRAQSERIRTY 388


>gi|325954306|ref|YP_004237966.1| peptide chain release factor 1 [Weeksella virosa DSM 16922]
 gi|323436924|gb|ADX67388.1| Peptide chain release factor 1 [Weeksella virosa DSM 16922]
          Length = 362

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 150/267 (56%), Gaps = 9/267 (3%)

Query: 87  ETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           E  + L +I KLE E K F  +     D  +  +E+ AG GG E+  +   + RMY  + 
Sbjct: 85  EKDEALHKIPKLEEEIK-FMLIPKDPEDDKNVIVELRAGTGGDEAAIFVEDIYRMYAMYF 143

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +++ ++ E L   +    G K   + ++G   YG +K E GVHR+ R+   +S  R HTS
Sbjct: 144 KQKGWQHEVLNTSEASGKGFKEMVISVEGNAVYGTMKYESGVHRVQRVPETESQGRVHTS 203

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P  ++ +++EI+ +D    T R+SGAGGQ+VN  ++ V++TH P+G+V+ CQ+
Sbjct: 204 AITVAVLPEAEE-VDVEINPADLEYQTARSSGAGGQNVNKVETKVQLTHKPSGIVIVCQE 262

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
            RSQHKN+ +A  +LR KLYE+E +K+   A   E  K+ +  G    +IR+Y   P   
Sbjct: 263 ARSQHKNREKALQLLRTKLYEIEFEKKH--AERSEQRKSLVSTGDRSAKIRTYNY-PQGR 319

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           V D R N    +  + ++GD+ + + A
Sbjct: 320 VTDHRINKSIYNLDNFMNGDIQEMIDA 346


>gi|145352937|ref|XP_001420790.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581025|gb|ABO99083.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 343

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 153/272 (56%), Gaps = 14/272 (5%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+ +++   L   SD L      VE      L     D  +  LE+ AG GG E+  WA
Sbjct: 57  VAMAKEEIDALTTESDAL------VETMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWA 110

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE+  ++T  +  +  +  G K   + IKG + Y  LK E GVHR+ R+ 
Sbjct: 111 GDLYRMYMRFAEREGWQTSVVTNNPADAGGYKEIVVEIKGDDVYSSLKWEAGVHRVQRVP 170

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R  TS +++ V P VD+ +E++I ++D  I T R+ GAGGQ+VN  ++A+ + H
Sbjct: 171 ATETQGRIQTSTATVAVMPEVDE-VEVKIDDNDLDISTARSGGAGGQNVNKVETAIDLMH 229

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+ V C +ER+Q KN+ +A  +LRAKL+EL+L+  E+   + +  K+++G G    +
Sbjct: 230 KPTGIRVFCTEERTQMKNRIRAMQILRAKLFELQLE--EQRKAVSDKRKSQVGSGSRSEK 287

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           IR+Y  +  + V D R      S  + LDGD+
Sbjct: 288 IRTYNWKDSR-VSDHRIGA-NFSLQNFLDGDI 317


>gi|89890298|ref|ZP_01201808.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
 gi|89517213|gb|EAS19870.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
          Length = 358

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 138/234 (58%), Gaps = 7/234 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A +E+ AGAGG E+  +A  L RMY ++   + + T  ++   G   G K   L +
Sbjct: 106 DAKNAVMEIRAGAGGDEASIFAGDLFRMYEKYCSSKGWSTSVVDTSHGTSGGYKEIILEV 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   ++  R HTS +++ V P  ++  ++E+  ++ RI+ 
Sbjct: 166 NGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVELDMTEVRIER 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
             ++G GGQ VNTT SA+++ H PTG++V CQ ++S HKN  +A  +LR++LYE+EL K+
Sbjct: 225 TTSTGPGGQSVNTTYSAIKLHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYEMELAKK 284

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            E  +  E  K+ +  G    +IR+Y     + V D R N+      ++++GD+
Sbjct: 285 MEADS--EKRKSMVSSGDRSAKIRTYNYSQGR-VTDHRINLTLYDLDNIINGDI 335


>gi|288905236|ref|YP_003430458.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|306831307|ref|ZP_07464467.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978212|ref|YP_004287928.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731962|emb|CBI13527.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|304426543|gb|EFM29655.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178140|emb|CBZ48184.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 359

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 146/260 (56%), Gaps = 14/260 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL+MY ++AE + +K + +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLQMYQKYAESQGWKFDVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK   +++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 ASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ IG G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQNEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 +L G LD+ + A +
Sbjct: 327 LQKLDTILSGKLDEVIDALI 346


>gi|218440653|ref|YP_002378982.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
 gi|226739098|sp|B7KI17|RF1_CYAP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218173381|gb|ACK72114.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
          Length = 370

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 128/206 (62%), Gaps = 6/206 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE + +  + +     +  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +E++I   D  + T
Sbjct: 172 KGDQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEVQIDPKDIEVST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSY 315
           +E   +    ++++G G    +IR+Y
Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTY 314


>gi|126658019|ref|ZP_01729171.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
 gi|126620657|gb|EAZ91374.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
          Length = 369

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 146/243 (60%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE +K+  + +     +  G K A L I
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +EI+I   D  + T
Sbjct: 172 TGDQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEIQIDPKDIEMTT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L+++
Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQ 290

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +    ++++G G    +IR+Y  +  + V D R   +  + +  L+G++D+ ++ 
Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFALAGALEGNIDNIIET 346

Query: 350 TLA 352
            ++
Sbjct: 347 CIS 349


>gi|109120568|ref|XP_001090893.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Macaca mulatta]
 gi|109120570|ref|XP_001090782.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 445

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 147/261 (56%), Gaps = 22/261 (8%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SLL  E  D ND  LEV +G   GG
Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K        + S  
Sbjct: 317 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK----DKCQQRSAR 372

Query: 305 EIGWGRQIRSYVLQPYQMVKD 325
           ++  G + +S  ++ Y   +D
Sbjct: 373 KLQVGTRAQSERIRTYNFTQD 393


>gi|14042548|dbj|BAB55295.1| unnamed protein product [Homo sapiens]
          Length = 238

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/222 (42%), Positives = 129/222 (58%), Gaps = 9/222 (4%)

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+ R
Sbjct: 3   FTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRVQR 62

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS  ++ + P   + I + I+  D RIDT RASGAGGQHVNTTDSAVRI
Sbjct: 63  VPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRI 121

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR- 310
            H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+  EEI     + K +IG  GR 
Sbjct: 122 VHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKGRS 179

Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
            +IR+Y   P   V D R N         + GD  LD+ +++
Sbjct: 180 EKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQS 220


>gi|291297042|ref|YP_003508440.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
 gi|290472001|gb|ADD29420.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
          Length = 358

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 136/243 (55%), Gaps = 13/243 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+ AG GG E+  +A  L  M   +A++  ++ E L+    +  G+      +
Sbjct: 103 DEKNAIVEIRAGTGGEEAALFAAELRDMIMEYAKQGGYRVEVLDTSLTDLGGVSKVVFEV 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            GP AYG+LK E GVHR+ R+   ++  R HTS +++ V P  ++ ++++I  +D  I  
Sbjct: 163 SGPGAYGYLKYEAGVHRVQRVPATETQGRIHTSTATVAVMPEAEE-VDVQIDPADLEITV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288
            RASG GGQ VNTTDSAV++ H PTG++V C + RSQ KNK +A ++LR++L E++    
Sbjct: 222 SRASGPGGQGVNTTDSAVQVLHKPTGMIVSCMESRSQIKNKEKALSILRSRLLEMKRAEE 281

Query: 289 --LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              ++ + +A IG   ++E     +IR+Y   P   V D R          VL GDL   
Sbjct: 282 AARRREDRLAQIGAGERSE-----KIRTYNF-PQSRVTDHRIGFTTHDLEGVLAGDLSKL 335

Query: 347 MKA 349
            +A
Sbjct: 336 HEA 338


>gi|172038958|ref|YP_001805459.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
 gi|171700412|gb|ACB53393.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
          Length = 375

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 146/243 (60%), Gaps = 8/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  L+RMY+R+AE +K+  + +     +  G K A L I
Sbjct: 118 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEI 177

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +EI+I   D  + T
Sbjct: 178 TGDQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEIQIDPKDIEMTT 236

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L+++
Sbjct: 237 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQ 296

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +E   +    ++++G G    +IR+Y  +  + V D R   +  + +  L+G++D+ ++ 
Sbjct: 297 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFALAGALEGNIDNIIET 352

Query: 350 TLA 352
            ++
Sbjct: 353 CIS 355


>gi|320546676|ref|ZP_08040988.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
 gi|320448731|gb|EFW89462.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
          Length = 359

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 145/258 (56%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL+MY ++AE + +K + +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLQMYQKYAESQGWKFDVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK   +++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 ASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKVIRARVADHFAQIAQNEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G LD+ + A
Sbjct: 327 LQKLDSILSGKLDEIIDA 344


>gi|194040714|ref|XP_001926694.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Sus scrofa]
 gi|311266318|ref|XP_003131053.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Sus scrofa]
          Length = 446

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/254 (40%), Positives = 142/254 (55%), Gaps = 23/254 (9%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE   +I Q         K+ + Y + F+SL+  E  D ND  LEV +G   GG
Sbjct: 149 LQELALEEKR-TIAQ---------KINMLYHELFQSLVPKEKYDKNDVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +  E L     +  G+  A   I G N Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSSYKHWTFELLNYTPADYGGLHHAAARISGANVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAGGQHVN 317

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ H+PTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K  E      + K 
Sbjct: 318 TTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEK--EKCQQQSARKL 375

Query: 305 EIGWGRQ---IRSY 315
           ++G   Q   IR+Y
Sbjct: 376 QVGTRAQSERIRTY 389


>gi|308810022|ref|XP_003082320.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116060788|emb|CAL57266.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1699

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 12/244 (4%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+  ++   L E SD L      VE      L     D  +  LE+ AG GG E+  WA
Sbjct: 129 VAMAREEIDALTEESDKL------VEDMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWA 182

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE+  ++   +  +  +  G K     IKG + Y  LK E GVHR+ R+ 
Sbjct: 183 GDLYRMYMRFAEREGWQATVVTSNTADAGGFKEIVAEIKGADVYSNLKWEAGVHRVQRVP 242

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R  TS +++ + P VD+ +E++I E D  I T R+ GAGGQ+VN  ++A+ + H
Sbjct: 243 ATETQGRIQTSTATVAIMPEVDE-VEVQIDEKDLDISTARSGGAGGQNVNKVETAIDLMH 301

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+ V C +ER+Q KN+ +A  +LRAKL+E++L+++++   I +  K+++G G    +
Sbjct: 302 KPTGIRVFCTEERTQLKNRIRAMQILRAKLFEIQLEEQQKA--ISDKRKSQVGSGSRSEK 359

Query: 312 IRSY 315
           IR+Y
Sbjct: 360 IRTY 363


>gi|167517235|ref|XP_001742958.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778057|gb|EDQ91672.1| predicted protein [Monosiga brevicollis MX1]
          Length = 416

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 117/199 (58%), Gaps = 26/199 (13%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD   A +E+ AG GG E+  +A+ L  MY   A+++++  + L+    ++ G++ A+L 
Sbjct: 124 ADEASAVVELRAGTGGREAALFAHDLKLMYQGLAQQQRWSFKVLDEQATDDGGLREASLS 183

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   +G LK E GVHR+ RI   ++  R HTS +++ V P   D +E+E+ + D  ++
Sbjct: 184 ISGSGVFGMLKFESGVHRVQRIPTTETAGRIHTSTATVAVLPEPTD-VEVEVLDKDIHVE 242

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK-------------------- 271
           TYRA GAGGQHVNTTDSAVR+TH+PTG VV CQ ERSQHK                    
Sbjct: 243 TYRAGGAGGQHVNTTDSAVRLTHLPTGTVVACQTERSQHKLEHIVSTRVAIDQCVLFNRV 302

Query: 272 -----NKAQAWNMLRAKLY 285
                NKA A  +L+A+++
Sbjct: 303 HHLVQNKAAAMKVLKARIF 321


>gi|145485050|ref|XP_001428534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395620|emb|CAK61136.1| unnamed protein product [Paramecium tetraurelia]
          Length = 390

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 181/365 (49%), Gaps = 39/365 (10%)

Query: 7   LNCLGGLFDWDNAV-----------QRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHL 52
            NC    F + N +           QRL  LNT+ E   D  +  ++ E K   R    L
Sbjct: 7   FNCHLNRFQFSNTLNNISKTLYLINQRLGELNTEYETYQDQTIKGDMNEIKR--RRMNEL 64

Query: 53  DNAISFIKEIQDRLC---DNLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLL 108
              I   K+IQ  +    D   L+ +    D+ S+L E       I+ ++EY K+++   
Sbjct: 65  QPKIHIYKQIQASVSVIEDAKQLIGMGGSSDEISMLNE------EIQSQIEYLKKYQDDA 118

Query: 109 SGEADSNDAY-------LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
             +    D Y       +EV AG GG+E   +A  ++ M   +A  + +    + I    
Sbjct: 119 LSQLIEEDEYDHIRQLNVEVRAGVGGSEGSLFAEDIIGMIQNYASLQNWDCRVISIQKDN 178

Query: 162 E--AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           +   G K+  L I G N Y  LK E GVH+++R+   ++  R H+S +S+ V P V DS 
Sbjct: 179 QIGKGCKTGILQINGENVYQHLKCESGVHKVIRVPETEAKGRLHSSTASMIVLPKVTDSF 238

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +  S+ D R +  RASG GGQHVN T+SA RITH+PTG+ V   ++RSQ +NK +A+ +
Sbjct: 239 HL--SDKDLRYEYMRASGPGGQHVNKTESACRITHVPTGIQVVNMEDRSQERNKQRAYQI 296

Query: 280 LRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           LR KL+ + +Q K+E +A   +S  T      +IR+Y   P + + D RTN+       +
Sbjct: 297 LRDKLFAIHVQEKQERMAQTRKSQVTGSDRSDKIRTYNF-PQERITDHRTNLTLYGMEKM 355

Query: 339 LDGDL 343
           L G+L
Sbjct: 356 LSGEL 360


>gi|126337707|ref|XP_001368579.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Monodelphis domestica]
          Length = 447

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 146/264 (55%), Gaps = 20/264 (7%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAG--AGGT 128
           LLELA EE +          + R+  E+    F+SL+  E D  +D  LEV +G   GG 
Sbjct: 147 LLELAFEEREV-----IDQKINRLCQEL----FQSLVPKEKDDKSDVILEVTSGRTTGGD 197

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
             Q +   +  MY  ++  + +  E L     +  G+  A   I G + Y ++K E G+H
Sbjct: 198 ICQQFTKEIFEMYQSYSCYKGWNFEILNYTTADYGGLHHAAARISGDSVYEYMKYEGGIH 257

Query: 189 RLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           R+ RI     +SR    HT   S+ V P  D+ ++I +   D RIDT+RA GAGGQHVNT
Sbjct: 258 RVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDIRVEPKDLRIDTFRAKGAGGQHVNT 316

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRI HIPTG+VV+CQQ+RSQ +NK  A+ +LRAKLY+  ++K +      + S  +
Sbjct: 317 TDSAVRIVHIPTGLVVECQQQRSQIQNKDTAFRLLRAKLYQQTIEKEQS----KKQSVRK 372

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTN 329
           +  G + +S  ++ Y   +D  T+
Sbjct: 373 LQVGTRAQSERIRTYNFTQDRVTD 396


>gi|293189723|ref|ZP_06608439.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
 gi|292821313|gb|EFF80256.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
          Length = 364

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 133/240 (55%), Gaps = 9/240 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  LE+ AG GG ES  +A+ L RMY R+AE   +    +     E  G K  TL I
Sbjct: 105 DAMDVILEIKAGEGGEESALFASDLARMYARYAEAHGWSVTEMSATHTELGGFKDITLAI 164

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +      P+   W  LK E GVHR+ R+   +S  R HTS + ++V P ++D  EI I  
Sbjct: 165 RAKGTPAPDEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDP 224

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQ +NK  A  +L ++L 
Sbjct: 225 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLA 284

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                K+E  A+    S+   +    +IR+Y   P   + D RT  +  +   VL G LD
Sbjct: 285 AEARAKKEAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALD 343


>gi|154509273|ref|ZP_02044915.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798907|gb|EDN81327.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
          Length = 364

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 133/240 (55%), Gaps = 9/240 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  LE+ AG GG ES  +A+ L RMY R+AE   +    +     E  G K  TL I
Sbjct: 105 DAMDVILEIKAGEGGEESALFASDLARMYARYAEAHGWSVTEMSATHTELGGFKDITLAI 164

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +      P+   W  LK E GVHR+ R+   +S  R HTS + ++V P ++D  EI I  
Sbjct: 165 RAKGTPAPDEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDP 224

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQ +NK  A  +L ++L 
Sbjct: 225 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLA 284

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                ++E  A+    S+   +    +IR+Y   P   + D RT  +  +   VL G LD
Sbjct: 285 AEARARKEAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALD 343


>gi|289615662|emb|CBI57583.1| unnamed protein product [Sordaria macrospora]
          Length = 436

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 28/292 (9%)

Query: 77  LEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD 132
           L+ DD  + Q  +D+L   K  LE       + L+ +    D    +E+H G GGTE + 
Sbjct: 100 LKSDDAELRQLANDDLDATKKHLETLGTNLSATLTPKHPFADMPCLIELHPGPGGTEGRH 159

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGE 184
           +A+ L RMY ++ E + +    L   + E        E  I  A L +  P A+   +GE
Sbjct: 160 FADTLFRMYQKYCENKGYTARVLSYQEAEDRTPGLDGEVPISEAVLEVTDPGAFAAFRGE 219

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPV-----VDDSIEIEISESDCRIDT------- 232
            G+HR+ RI   +   R HTS  ++WV P       D   +    ESD  ID        
Sbjct: 220 AGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYIDPTEVKSEK 279

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++  L  ++R
Sbjct: 280 MRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQSQNREKAWRLLRSRIASLRREQR 339

Query: 293 EEIA-NIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +  A ++ +S  S+ ++  G +IR+Y  Q      D R+ ++  +  +VL G
Sbjct: 340 DAQAKDLRDSVLSQAQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 390


>gi|193786181|dbj|BAG51464.1| unnamed protein product [Homo sapiens]
          Length = 445

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SL+  E  D ND  LEV AG   GG
Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADNGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +    + 
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 372

Query: 303 KTEIGWGRQ---IRSY 315
           K ++G   Q   IR+Y
Sbjct: 373 KLQVGTRAQSERIRTY 388


>gi|42521715|ref|NP_967095.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
 gi|61214632|sp|Q6MRK9|RF1_BDEBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39574245|emb|CAE77749.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
          Length = 357

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 181/351 (51%), Gaps = 18/351 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   +AV+ R   +N   + P +  N  + + LM+E  +L+  +   ++ + +  +   
Sbjct: 1   MFSKLDAVESRYEEVNMALQRPDIASNQTQYRALMKELGNLEKIVLVYRDYRKKTENLKA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGA 125
             EL   E D  + +   + ++  +LE E    E  L          D  +  LE+ AGA
Sbjct: 61  SKELLTAEQDAEMRELIREEVK--ELEAELPDLEQQLKIALIPKDPNDDKNTILEIRAGA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A+ L R Y  +A  + +K E +   +G   G K     I G + +  +K E 
Sbjct: 119 GGDEAALFADELFRGYVHYASTQGWKVEMISFSEGNAGGAKEIIASITGDSVFSKMKYES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS  ++ V P V+ S EI+I  SD RI+T R+ G+GGQ VN 
Sbjct: 179 GVHRVQRVPKTEAAGRIHTSTVTVAVIPEVEVS-EIKIPMSDVRIETMRSQGSGGQSVNR 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKT 304
           T+SAVR+ H+PTG+ V+CQ+ +SQ  N+ +A+ +L AKL ++E +K R+E +++      
Sbjct: 238 TESAVRVVHLPTGIDVKCQEGKSQSTNRERAFQILYAKLQQIEDEKARKEASDV---RLE 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   + D R  +       V+ G  +  +   +A
Sbjct: 295 QIGTGDRSERIRTYNF-PQTRITDHRIGLTIHQLDQVMSGSFELLIDPLIA 344


>gi|242069313|ref|XP_002449933.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
 gi|241935776|gb|EES08921.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
          Length = 412

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 169/300 (56%), Gaps = 15/300 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDC 82
           ++ +  DP +  +  E + L +    LD  ++  ++ +D  C+  +    ALE   EDD 
Sbjct: 64  MSVRLADPDIVSDPSEYQKLAQSVSELDQVVTTYRQFKD--CERQLEETKALEKENEDDP 121

Query: 83  SILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            + +  +  L+ +  ++    E  +   L S   DS +  LEV AGAGG E+  WA  L+
Sbjct: 122 DMSEMITSELEALSNQLAELEEKLKLLLLPSDPLDSRNILLEVRAGAGGDEAGIWAGDLV 181

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY ++ E+  +K + +   + +  G K+  + +KG   Y  LK E GVHR+ R+   ++
Sbjct: 182 RMYQKYCERNNWKFKPVSCSEADMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTET 241

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ + P  D+ +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG
Sbjct: 242 MGRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTG 300

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + + C +ERSQ +NK +A+ +LRAKLYE++L++++E  +I    K ++G G    +IR+Y
Sbjct: 301 IRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQE--SIRNQRKMQVGTGARSEKIRTY 358


>gi|260584605|ref|ZP_05852351.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
 gi|260157628|gb|EEW92698.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
          Length = 359

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 138/242 (57%), Gaps = 7/242 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  LL MY ++AE + ++ E ++ +     G K   L+I
Sbjct: 106 DGKNIIMEIRGAAGGDEAALFAGDLLSMYQKYAESQGWRVEVMDANVTGIGGYKEVILMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N +  LK E G HR+ R+   +S  R HTS +++ V P  +  +EIE+ + D R+D 
Sbjct: 166 TGDNVFSKLKYESGAHRVQRVPSTESQGRVHTSTATVVVMPEAE-EVEIELEDKDIRVDI 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           Y ASGAGGQHVN T SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+   Q  
Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ-- 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           E  +    + K+ +G G    +IR+Y   P   V D R  +       VL G +D+ + A
Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDA 341

Query: 350 TL 351
            +
Sbjct: 342 LI 343


>gi|159904190|ref|YP_001551534.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9211]
 gi|238687119|sp|A9BCL8|RF1_PROM4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|159889366|gb|ABX09580.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9211]
          Length = 365

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 135/244 (55%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AGAGG E+  WA  L RMY R+ +K  +    +   D +  G +   + +
Sbjct: 112 DERSVMLEIRAGAGGDEACIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + +  LK E GVHR+ R+   +S  R HTS +++ V P  D  +E+++   D  I T
Sbjct: 172 KGDSVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQLDPGDLEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKL E+E+ + 
Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLEMEIAE- 289

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348
              AN  E S      G   RS  ++ Y   KD RT   +   +    +VL+G+LD+ + 
Sbjct: 290 ---ANAKERSARLAQVGTGDRSEKIRTYNY-KDNRTTDHRLGINFPLENVLEGELDNLIG 345

Query: 349 ATLA 352
           A +A
Sbjct: 346 ACIA 349


>gi|171779352|ref|ZP_02920316.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281969|gb|EDT47400.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 359

 Score =  152 bits (384), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 139/244 (56%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL+MY ++AE + +K + +E       GIK   +++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E EI   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYEIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ +G G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVI 342

Query: 348 KATL 351
            A +
Sbjct: 343 DALI 346


>gi|332375689|gb|AEE62985.1| unknown [Dendroctonus ponderosae]
          Length = 400

 Score =  152 bits (384), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 126/207 (60%), Gaps = 7/207 (3%)

Query: 113 DSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           DS D   LEV AG GG E+  +A  +  MY  +   + +K + ++    +  GI+  ++L
Sbjct: 142 DSFDTIILEVQAGVGGQEAMLFAQEMFDMYCSFISLKGWKYDIVDYMGTDLGGIRRGSIL 201

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G  AY + K E GVHR+ RI   + +SR HTS  S+   P  ++ I+I I   D +I+
Sbjct: 202 VNGSKAYKFFKHEGGVHRVQRIPSTEKSSRIHTSTVSVTALPQPNE-IDIRIDPKDLKIE 260

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T R++GAGGQHVNTTDSAVRI H+PT ++V+CQ +RSQ KN+  A   LRA LY+ EL+ 
Sbjct: 261 TKRSTGAGGQHVNTTDSAVRIVHLPTNIMVECQVDRSQIKNRKLALTKLRALLYQRELE- 319

Query: 292 REEIANIGESSKTEIG---WGRQIRSY 315
            E++A    + K+++       +IR+Y
Sbjct: 320 -EQLAQQESTKKSQVSSNNRNEKIRTY 345


>gi|325283363|ref|YP_004255904.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
 gi|324315172|gb|ADY26287.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
          Length = 377

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 144/245 (58%), Gaps = 12/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D NDA LE+ +GAGG E+  +A  LLRMY+R+AE    + E L+ ++ +  G       +
Sbjct: 105 DPNDAVLEIRSGAGGAEAALFAADLLRMYSRYAESAGLRLEVLDSNESDLGGFAKVVAEV 164

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  LK E GVHR+ R+   +S  R HTS  ++ V P V+ S E+++  S+ RID 
Sbjct: 165 TGEFAYRTLKWESGVHRVQRVPATESQGRIHTSTVTVAVLPQVEQS-EVQLDLSEVRIDV 223

Query: 233 YRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +R+ GAGGQ VNTTDSAVR T+    P  ++V CQ  RSQ KN+ +A  +L ++L E E 
Sbjct: 224 FRSQGAGGQSVNTTDSAVRATYRAGTPDEIMVVCQDGRSQIKNREKALMILASRLAERER 283

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE-KTSPSD-VLDGDLD 344
           +K++  A+  E+  ++IG G    ++R+Y   P   V D R   E K  P + V+ G L+
Sbjct: 284 EKQQ--ASEREARSSQIGSGDRSEKVRTYNY-PQNRVTDHRLEGETKNFPLETVIGGRLE 340

Query: 345 DFMKA 349
           + + A
Sbjct: 341 ELVGA 345


>gi|323446989|gb|EGB02968.1| hypothetical protein AURANDRAFT_12526 [Aureococcus anophagefferens]
          Length = 305

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/267 (37%), Positives = 142/267 (53%), Gaps = 38/267 (14%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+    +EV A AGG E+  +A  LL MY R+A +R+   + L +   +  G+  A   +
Sbjct: 40  DAPACLVEVKAAAGGDEASLFAGDLLAMYERFAGRRRHGWDLLSVTKSDCGGVSHAYAEV 99

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRI 230
           KGP AYG L+ E GVHR+ R+   D   R HTS +S+ V+P    D    ++   ++ RI
Sbjct: 100 KGPGAYGALRFESGVHRVQRVPRNDV--RIHTSTASVVVFPAGAEDRGATVDFDPAELRI 157

Query: 231 DTYRASGAGGQH------------------VNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           DT+RASGAGGQH                  VNTT+SAVR+TH+PTG VV  Q ERSQH+N
Sbjct: 158 DTFRASGAGGQHATTRMEIFNPTSMRAYQNVNTTNSAVRVTHLPTGTVVSIQDERSQHRN 217

Query: 273 KAQAWNMLRAKLY--------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           KA+A  +L +++               R ++A  G+ ++       +IR+Y   P+  V 
Sbjct: 218 KAKALKVLASRVVGAQAAAAAAARSASRAKLAGSGDRAE-------RIRTYN-APHDRVT 269

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R+     S   VL GDL D + A+L
Sbjct: 270 DHRSGFTANSVDRVLRGDLLDDVVASL 296


>gi|34577120|ref|NP_004285.2| peptide chain release factor 1, mitochondrial precursor [Homo
           sapiens]
 gi|114651371|ref|XP_509647.2| PREDICTED: peptide chain release factor 1, mitochondrial isoform 5
           [Pan troglodytes]
 gi|114651373|ref|XP_001150158.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Pan troglodytes]
 gi|114651375|ref|XP_001150218.1| PREDICTED: mitochondrial translational release factor 1 isoform 4
           [Pan troglodytes]
 gi|62512140|sp|O75570|RF1M_HUMAN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|27503783|gb|AAH42196.1| Mitochondrial translational release factor 1 [Homo sapiens]
 gi|55958420|emb|CAI16615.1| mitochondrial translational release factor 1 [Homo sapiens]
 gi|119629053|gb|EAX08648.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629054|gb|EAX08649.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629056|gb|EAX08651.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629058|gb|EAX08653.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
          Length = 445

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SL+  E  D ND  LEV AG   GG
Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +    + 
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 372

Query: 303 KTEIGWGRQ---IRSY 315
           K ++G   Q   IR+Y
Sbjct: 373 KLQVGTRAQSERIRTY 388


>gi|322434298|ref|YP_004216510.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
 gi|321162025|gb|ADW67730.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
          Length = 358

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 8/244 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLL 171
           D  +  +E+ AG GG E+  +   + R+Y R AE+ ++K + L E   G   G+K  T +
Sbjct: 105 DDKNIVIELRAGTGGDEAALFVAEMFRVYLRLAEQHRWKVQVLSESFSGIGNGLKDVTAI 164

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
            +G   Y  +K E GVHR+ R+   ++  R HTS  ++ V P  ++ ++I+I   D R+D
Sbjct: 165 FEGDRVYSQMKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEE-VDIKIEAKDLRVD 223

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T+ +SG GGQ VNTT SA+RITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+  + 
Sbjct: 224 TFCSSGPGGQSVNTTYSAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVAEET 283

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           R +     +  K ++G G    +IR+Y   P   + D R  +   + + V++G L   + 
Sbjct: 284 RHQAE--AKIRKDQVGTGDRSEKIRTYNF-PQNRLTDHRIGLTNHNLNMVMEGQLQPTID 340

Query: 349 ATLA 352
           A +A
Sbjct: 341 ALIA 344


>gi|156055958|ref|XP_001593903.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980]
 gi|154703115|gb|EDO02854.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 490

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 144/261 (55%), Gaps = 27/261 (10%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG----IKSATLLI 172
           +E+  GAGG E+  +A  LLRMY  +  +++F++  +  E  DGE AG    I    L I
Sbjct: 210 VEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYETADGEGAGSDSPISEVVLEI 269

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----------------D 216
           + P +Y  L+GE GVHR+ R+   +   R HTS  S+ V P                  D
Sbjct: 270 ETPGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVLPSFPTTGQEGQEYWEADLND 329

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            + +  ++ +D R D  RA GAGGQHVNTTDSAVR+TH+PT  VV  Q+ RSQ +N+ +A
Sbjct: 330 PNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVPTNTVVSMQEGRSQLQNRQKA 389

Query: 277 WNMLRAKLYELELQKREE-IANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           W +LR++L   + + REE + N+  S     ++G G +IR+Y     Q V D R+ +   
Sbjct: 390 WQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIRTYNWG-QQRVTDHRSGLSVH 448

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +  DV++G  D+  K   ++K
Sbjct: 449 NLDDVMEGG-DELEKVIDSVK 468


>gi|284929590|ref|YP_003422112.1| peptide chain release factor 1 [cyanobacterium UCYN-A]
 gi|284810034|gb|ADB95731.1| bacterial peptide chain release factor 1 (bRF-1) [cyanobacterium
           UCYN-A]
          Length = 367

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 146/247 (59%), Gaps = 16/247 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR----KFKTEALEIHDGEEAGIKSA 168
           D  +  LE+ AG GG E+  WA  L RMY+R+AE +    K   E+L     +  GIK  
Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLARMYSRYAESQNWVVKLANESL----ADMGGIKET 167

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
            L I G   +  LK E GVHR+ R+   ++  R HTS +++ + P VD+ +E++I   D 
Sbjct: 168 ILEITGDKVFSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEVKIDAKDI 226

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            + T R+ GAGGQ+VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +
Sbjct: 227 DMSTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAK 286

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           L++++E   I    K+++G G    +IR+Y  +  + V D R   +  + S +L+GD+D 
Sbjct: 287 LREQQE--EISSMRKSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFALSGILEGDIDI 342

Query: 346 FMKATLA 352
            +++ ++
Sbjct: 343 LIESCIS 349


>gi|114609867|ref|XP_001140527.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114609869|ref|XP_001140612.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 238

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/223 (41%), Positives = 126/223 (56%), Gaps = 11/223 (4%)

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+ R
Sbjct: 3   FTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRVQR 62

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS  ++ + P   + I + I+  D RIDT RASGAGGQHVNTTDSAVRI
Sbjct: 63  VPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRI 121

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREEIANIGESSKTEIGW 308
            H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+    KR+    I   SK   G 
Sbjct: 122 VHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GR 178

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
             +IR+Y   P   V D R N         + GD  LD+ +++
Sbjct: 179 SEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQS 220


>gi|302830560|ref|XP_002946846.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
 gi|300267890|gb|EFJ52072.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
          Length = 361

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 138/267 (51%), Gaps = 45/267 (16%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLL 171
           D   A LE+ AGAGG E+  +   LL MY ++A  R +  + +E+   E   G+K     
Sbjct: 59  DGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVPGGVKHVVAA 118

Query: 172 IK-------------------------------GPNAYGWLKGEQGVHRLVRISPYDSNS 200
           +                                    YG L  E GVHR+ R+   ++  
Sbjct: 119 VAAGRGAGRRAGGIGDGGEGYDGGEGNSDQDGDAIGVYGTLLPESGVHRVQRVPVTEAQG 178

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P  D+ +++++ + D RI+T RASGAGGQHVN TDSAVRITH+PTG+V
Sbjct: 179 RVHTSTVAVVVLPQADE-VDVKLRDEDLRIETMRASGAGGQHVNVTDSAVRITHVPTGLV 237

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSKTEIGWGRQIRS 314
           V CQ ERSQH N+A A  +LRA+LY+LE+QKR      +  A +  + ++E     +IR+
Sbjct: 238 VSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSE-----RIRT 292

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y   P   V D R ++       VL G
Sbjct: 293 YNF-PQGRVTDHRIHLTLHDLDSVLVG 318


>gi|114651377|ref|XP_001150094.1| PREDICTED: mitochondrial translational release factor 1 isoform 2
           [Pan troglodytes]
          Length = 487

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SL+  E  D ND  LEV AG   GG
Sbjct: 190 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 239

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 240 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 299

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 300 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 358

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +    + 
Sbjct: 359 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 414

Query: 303 KTEIGWGRQ---IRSY 315
           K ++G   Q   IR+Y
Sbjct: 415 KLQVGTRAQSERIRTY 430


>gi|312865182|ref|ZP_07725410.1| peptide chain release factor 1 [Streptococcus downei F0415]
 gi|311099293|gb|EFQ57509.1| peptide chain release factor 1 [Streptococcus downei F0415]
          Length = 359

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 21/315 (6%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEV 99
           E   + RE + +  AIS  +E+      +  L E+A EE  D  I +E  +   +I L  
Sbjct: 45  ETVTVYREYKQILQAISDAEEMIKEAGGDPELEEMAKEELKDSKIAKEDYEEKMKILL-- 102

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  L     D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E   
Sbjct: 103 -------LPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAESQGWRFEVMEASY 155

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
               GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +
Sbjct: 156 NGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-V 214

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E +I   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A  +
Sbjct: 215 EYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKI 274

Query: 280 LRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334
           +RA++ +   ++ + E+ A      K+ IG G    +IR+Y   P   V D R  +    
Sbjct: 275 IRARVADHFAQIAQDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQK 329

Query: 335 PSDVLDGDLDDFMKA 349
              +L G +D+ + A
Sbjct: 330 LDTILSGKMDEVIDA 344


>gi|189191194|ref|XP_001931936.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973542|gb|EDU41041.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 321

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 137/242 (56%), Gaps = 20/242 (8%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGIK--SATLLIK 173
           LE+  GAGG+E+  +A  L RMY  +  +  F+T  L+   I+   EAG+    A + ++
Sbjct: 50  LEIRPGAGGSEAAIFAGDLFRMYMAFCNRNGFRTNLLKYENINGTTEAGVPLSEAIMEVE 109

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI----EIEISESDCR 229
             NAYG  + E GVHR+ R+   ++  R HTS +S+ V P + ++     + +  ESD  
Sbjct: 110 NENAYGVFRCEAGVHRVQRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYY 169

Query: 230 ID-------TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ID         RASGAGGQHVN T+SAVR+TH+PT  VV  Q  RSQHKNK +AW +LRA
Sbjct: 170 IDPKEVKLEVMRASGAGGQHVNKTESAVRLTHMPTNTVVAMQDSRSQHKNKEKAWALLRA 229

Query: 283 KLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++ +   +KR EE+AN+  S      +G G ++R+Y     Q V D R+        DV+
Sbjct: 230 RIAQTRREKREEEMANMRRSVIGVARMGRGDKVRTYNWG-QQRVTDHRSGTTVHDLDDVM 288

Query: 340 DG 341
            G
Sbjct: 289 GG 290


>gi|119629057|gb|EAX08652.1| mitochondrial translational release factor 1, isoform CRA_c [Homo
           sapiens]
          Length = 487

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SL+  E  D ND  LEV AG   GG
Sbjct: 190 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 239

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 240 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 299

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 300 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 358

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +    + 
Sbjct: 359 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 414

Query: 303 KTEIGWGRQ---IRSY 315
           K ++G   Q   IR+Y
Sbjct: 415 KLQVGTRAQSERIRTY 430


>gi|296203802|ref|XP_002749048.1| PREDICTED: peptide chain release factor 1, mitochondrial
           [Callithrix jacchus]
          Length = 488

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/254 (39%), Positives = 146/254 (57%), Gaps = 23/254 (9%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE   +++Q         K+ + Y + F+SL+  E  D ND  LEV +G   GG
Sbjct: 191 LQELALEERQ-TLVQ---------KINMLYSELFQSLVPKEKYDKNDVILEVTSGKTTGG 240

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 241 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 300

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ + P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 301 HRVQRIPEVGLSSRMQRIHTGTMSVIILPQPDE-VDVKLDPKDLRIDTFRARGAGGQHVN 359

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ +NK  A ++LRA+LY+  ++K +       + K 
Sbjct: 360 TTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLYQQIIEKNK--CQQHSTRKL 417

Query: 305 EIGWGRQ---IRSY 315
           ++G G Q   IR+Y
Sbjct: 418 QVGTGAQSERIRTY 431


>gi|325067255|ref|ZP_08125928.1| peptide chain release factor 1 [Actinomyces oris K20]
          Length = 397

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 108/174 (62%), Gaps = 7/174 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+  D +  G K   L I
Sbjct: 212 DSRDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 271

Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  GP       +  LK E GVHR+ R+   +S  R HTS + + V P  DD  E++I  
Sbjct: 272 KARGPVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 331

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  A  +
Sbjct: 332 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRV 385


>gi|149003372|ref|ZP_01828261.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758555|gb|EDK65553.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 145

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/139 (51%), Positives = 97/139 (69%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ N
Sbjct: 2   PELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGN 61

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           + +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E 
Sbjct: 62  RDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFEV 121

Query: 333 TSPSDVLDGDLDDFMKATL 351
                V+DGDLD F+ A L
Sbjct: 122 AQVDKVMDGDLDGFIDAYL 140


>gi|297567138|ref|YP_003686110.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
 gi|296851587|gb|ADH64602.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
          Length = 364

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 137/240 (57%), Gaps = 13/240 (5%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +  +E+ AG GG E+  +A  L  M   +A ++ F+TE L+++  +  G+   +  + G 
Sbjct: 106 NVIVEIRAGTGGEEAALFAAELRDMIMEFARRKGFRTEILDVNLTDLGGVSKVSFEVIGA 165

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG LK E GVHR+ R+   ++  R HTS +++ V P  ++ +++E+  +D  I   RA
Sbjct: 166 GAYGVLKYEAGVHRVQRVPATEAQGRIHTSTATVAVMPEAEE-VDVELDPADLEITVSRA 224

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE------L 289
           SG GGQ VNTTDSAV++ H PTG++V C + RSQ KNK +A  +LR++L E++       
Sbjct: 225 SGPGGQGVNTTDSAVQVLHKPTGMIVSCMESRSQIKNKEKALTILRSRLLEMKRAEEAAR 284

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           ++ + +A IG   ++E     +IR+Y   P   V D R      +   VL GDL +  +A
Sbjct: 285 RREDRLAQIGAGERSE-----KIRTYNF-PQSRVTDHRIGFTTHNLEGVLSGDLFELHEA 338


>gi|194377328|dbj|BAG57612.1| unnamed protein product [Homo sapiens]
          Length = 468

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/257 (40%), Positives = 147/257 (57%), Gaps = 29/257 (11%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SL+  E  D ND  LEV AG   GG
Sbjct: 161 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 210

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 211 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 270

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 271 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 329

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIA----NI 298
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +     +
Sbjct: 330 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 389

Query: 299 GESSKTEIGWGRQIRSY 315
           G  +++E     +IR+Y
Sbjct: 390 GTRAQSE-----RIRTY 401


>gi|294790651|ref|ZP_06755809.1| peptide chain release factor 1 [Scardovia inopinata F0304]
 gi|294458548|gb|EFG26901.1| peptide chain release factor 1 [Scardovia inopinata F0304]
          Length = 365

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 14/321 (4%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P +  N  + + L R    L   ++  ++ + RL D+L   +    EDD       +  L
Sbjct: 27  PEIASNPDKIRKLGRRHAELAQIVTAYQDYK-RLSDDLDAAKEFAAEDDS--FAAEAQRL 83

Query: 93  QRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +      E K   +L+  + D + D  +E+ AGAGG E+  +A  LLRMYTR+AEKR + 
Sbjct: 84  EEKLPAAEEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAGDLLRMYTRYAEKRGWA 143

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYG-----W--LKGEQGVHRLVRISPYDSNSRRHT 204
           TE +  +  E  G+K   +  +   A       W  LK E GVHR+ RI   +S  R  T
Sbjct: 144 TEIMSQNMTELGGVKDIQIAFRNKGAVAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQT 203

Query: 205 SFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           S + + V+P   DD  EIEI   D +ID + +SG GGQ VNTT SAVR+THIPTG+VV  
Sbjct: 204 SAAGVIVFPEADDDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSM 263

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           Q E+SQ +N+A A  +L+++L  ++ ++  +E A++  S    +    +IR+Y   P   
Sbjct: 264 QDEKSQIQNRAAALRVLKSRLLAMKHEEEAQEAADMRHSQVRSLDRSERIRTYNF-PENR 322

Query: 323 VKDLRTNIEKTSPSDVLDGDL 343
           + D RTN +  +   VLDGDL
Sbjct: 323 IVDHRTNYKAYNLDAVLDGDL 343


>gi|84996385|ref|XP_952914.1| peptide chain release factor [Theileria annulata strain Ankara]
 gi|65303911|emb|CAI76290.1| peptide chain release factor, putative [Theileria annulata]
          Length = 364

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 138/278 (49%), Gaps = 39/278 (14%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-----------KRKFKTEALEIHDGE 161
           D N   L + +G GG+ES DW  +L  MY ++                 + + +++  G 
Sbjct: 83  DRNSCKLIIKSGVGGSESFDWCRILTEMYKKFISHYEPPDSDDNFPSSLRLKEVDVCPGS 142

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE- 220
             G +     + G  AY  LKGE G HRL+R SP++S ++R TSF S+ V P++ D+ E 
Sbjct: 143 TGGFRRVEFDVIGDYAYRLLKGENGTHRLIRNSPFNSENKRQTSFGSVQVVPILSDTDEE 202

Query: 221 -------IEISESDCRIDTYRASGAGGQHVNTTDSA--------------------VRIT 253
                   ++ + D  I++ R+SG GGQ+VN  ++A                    VR+ 
Sbjct: 203 VVNFKKNRQLLKKDLIIESMRSSGKGGQNVNKVETAGNLLFLKSIFTKSTIDIFVLVRVY 262

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+ V+ QQER+  +N+  A  ML   + +  L+K  E  N  +       WG  IR
Sbjct: 263 HKPTGLSVKVQQERTNTQNREIAIRMLTKLVDQHYLKKLNEKVNEIKGEDLVGTWGSHIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y L P Q VKD RTN E +  ++VL+GDL  F+   L
Sbjct: 323 TYTLNPEQRVKDHRTNFETSKATNVLNGDLLPFILTYL 360


>gi|126728795|ref|ZP_01744610.1| peptide chain release factor 1 [Sagittula stellata E-37]
 gi|126710725|gb|EBA09776.1| peptide chain release factor 1 [Sagittula stellata E-37]
          Length = 349

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/313 (36%), Positives = 167/313 (53%), Gaps = 11/313 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-- 102
           L RE   L   +  I E  +RL  ++   E  L + +   L E      R  L    K  
Sbjct: 31  LGREFAELSPVVRQIAE-WERLTSDIEEAEAMLADPEMRALAEEELPDLRAALPAAEKAV 89

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    AD+  A LE+  G GG E+  +A  L RMY R+AE   ++ + +E    E 
Sbjct: 90  QLALLPKDAADARPAVLEIRPGTGGDEAALFAGDLARMYQRYAEAHGWRWDVIEEQMSEL 149

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+K   + + G   +  LK E GVHR+ R+   +S  R HTS +++ V P  ++ ++I 
Sbjct: 150 GGVKELVVRVVGEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEE-VDIA 208

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+ +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +LR 
Sbjct: 209 IAAADIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLRT 267

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +L++LE  K +  A      K ++G G    +IR+Y   P   + D R  +       ++
Sbjct: 268 RLFDLERSKAD--AARSADRKAQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYKLDAIM 324

Query: 340 DGDLDDFMKATLA 352
            GDLD+ + A ++
Sbjct: 325 GGDLDEIIDALIS 337


>gi|114651379|ref|XP_001150035.1| PREDICTED: mitochondrial translational release factor 1 isoform 1
           [Pan troglodytes]
          Length = 455

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/257 (40%), Positives = 147/257 (57%), Gaps = 29/257 (11%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SL+  E  D ND  LEV AG   GG
Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIA----NI 298
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +     +
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 376

Query: 299 GESSKTEIGWGRQIRSY 315
           G  +++E     +IR+Y
Sbjct: 377 GTRAQSE-----RIRTY 388


>gi|121727222|ref|ZP_01680389.1| peptide chain release factor 1 [Vibrio cholerae V52]
 gi|121630467|gb|EAX62860.1| peptide chain release factor 1 [Vibrio cholerae V52]
          Length = 193

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/181 (44%), Positives = 116/181 (64%), Gaps = 6/181 (3%)

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  AYG LK E G HR+ R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+
Sbjct: 1   GDGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTF 60

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR 
Sbjct: 61  RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR- 119

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             A I ++ +  +G G    +IR+Y   P   V D R N+     ++V++GD+   +   
Sbjct: 120 -AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPV 177

Query: 351 L 351
           +
Sbjct: 178 I 178


>gi|33241132|ref|NP_876074.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81663962|sp|Q7V9Z0|RF1_PROMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33238662|gb|AAQ00727.1| Protein chain release factor A [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 365

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 135/244 (55%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AGAGG E+  WA  L RMY R+  K  +  +A+   + +  G +   + +
Sbjct: 112 DERSVMLEIRAGAGGDEACIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   +  LK E GVHR+ R+   +S  R HTS +++ V P  D  +E+++  +D  I T
Sbjct: 172 KGKAVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVKLEPTDLEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKL E E+++ 
Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREIEE- 289

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348
              AN  E S      G   RS  ++ Y   KD RT   +   +     VL+G+LDD + 
Sbjct: 290 ---ANAKERSARLAQVGTGDRSEKIRTYNY-KDNRTTDHRLGVNFPLETVLEGELDDLIG 345

Query: 349 ATLA 352
           A +A
Sbjct: 346 ACIA 349


>gi|19921226|ref|NP_609617.1| CG5705 [Drosophila melanogaster]
 gi|7298021|gb|AAF53262.1| CG5705 [Drosophila melanogaster]
 gi|16769148|gb|AAL28793.1| LD18447p [Drosophila melanogaster]
 gi|220943136|gb|ACL84111.1| CG5705-PA [synthetic construct]
 gi|220953196|gb|ACL89141.1| CG5705-PA [synthetic construct]
          Length = 392

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 113/173 (65%), Gaps = 1/173 (0%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGG E+  +A  L  MYT + E   ++ E       +  G++ A+L++ G +A+ W
Sbjct: 135 LNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRW 194

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHR+ R+   + + R HTS +SI V P   D I++ I+E D +I+T RASGAGG
Sbjct: 195 LRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IQVHIAEKDLKIETKRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR++L + +L+  E
Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVE 306


>gi|145362209|ref|NP_973706.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|330255694|gb|AEC10788.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 256

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 1/164 (0%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K + ++I + +  G K A+ 
Sbjct: 93  EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 152

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G + YG LK E G+HR+ RI   + + R HTS  S+ + P  D+ +++++   D RI
Sbjct: 153 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 211

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           DTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH +++
Sbjct: 212 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMSQS 255


>gi|315604645|ref|ZP_07879708.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313657|gb|EFU61711.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 364

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 132/240 (55%), Gaps = 9/240 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  LE+ AG GG ES  +A+ L RMY R+AE   +    L     E  G K  TL I
Sbjct: 105 DAMDVILEIKAGEGGEESALFASDLARMYGRYAEAHGWSVTELSATHTELGGFKDVTLAI 164

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +      P+   W  LK E GVHR+ R+   +S  R HTS   ++V P ++D  EI I  
Sbjct: 165 RAKGTPAPDEGVWAHLKYEGGVHRVQRVPITESQGRIHTSAVGVFVMPEIEDDDEIVIDP 224

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVRITH+P+G+VV  Q E+SQ +NK  A  +L ++L 
Sbjct: 225 ADLRIDVYRSSGPGGQSVNTTDSAVRITHLPSGIVVSMQNEKSQLQNKEAALRVLASRLA 284

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                KRE  A+    S+   +    +IR+Y   P   + D RT  +  +   VL G LD
Sbjct: 285 AEARAKREAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALD 343


>gi|322389535|ref|ZP_08063086.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
 gi|321143810|gb|EFX39237.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|83773134|dbj|BAE63261.1| unnamed protein product [Aspergillus oryzae]
          Length = 388

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 163/315 (51%), Gaps = 37/315 (11%)

Query: 53  DNAISFIKEIQDRLCD---NLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESL 107
           D A   I E+   L D   +L L  LA+E+ +   + L   S+NL+  K  V    F +L
Sbjct: 48  DRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTISENLK--KALVPRHPFAAL 105

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LEIHDGE-EAG 164
                      LE+  GAGG E+  +A  LLRMYT +  +R F++    LE+ DG  E  
Sbjct: 106 --------PCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLEVGDGPAEDR 157

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-------VVDD 217
           +  A + ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P        +D+
Sbjct: 158 LNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPETGGAMDN 217

Query: 218 SIEIEISESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           ++  +   SD  +D         RA GAGGQHVN T+SA+R+TH+PTG+VV  Q  RSQH
Sbjct: 218 ALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQH 277

Query: 271 KNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
            N+ +AW +LRA+L E   + RE    E+          +G G +IR+Y     +   D 
Sbjct: 278 ANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNYGQSR-CTDH 336

Query: 327 RTNIEKTSPSDVLDG 341
           R++I   + +DVLDG
Sbjct: 337 RSSITIHNLNDVLDG 351


>gi|296876522|ref|ZP_06900573.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
 gi|296432515|gb|EFH18311.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|319947033|ref|ZP_08021267.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
 gi|319747081|gb|EFV99340.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|22537235|ref|NP_688086.1| peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
 gi|32171547|sp|Q8DZM4|RF1_STRA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22534102|gb|AAM99958.1|AE014241_9 peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI + D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|76788237|ref|YP_329784.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77405475|ref|ZP_00782567.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
 gi|119361618|sp|Q3K119|RF1_STRA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76563294|gb|ABA45878.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77175872|gb|EAO78649.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI + D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|25011160|ref|NP_735555.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76798425|ref|ZP_00780665.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77408667|ref|ZP_00785400.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|77410552|ref|ZP_00786913.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77413289|ref|ZP_00789485.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|32171550|sp|Q8E5C3|RF1_STRA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23095559|emb|CAD46768.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76586220|gb|EAO62738.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77160676|gb|EAO71791.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|77163500|gb|EAO74450.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77172715|gb|EAO75851.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|319745079|gb|EFV97405.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC
           13813]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI + D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|254577375|ref|XP_002494674.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
 gi|238937563|emb|CAR25741.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
          Length = 393

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/220 (40%), Positives = 123/220 (55%), Gaps = 9/220 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNA 177
           LE+  G GGTE+  +   LL MY  +A+   +K   +  ++ +   G+  A L I  P A
Sbjct: 140 LELRPGVGGTEAMIFTQDLLNMYIGYAQYHHWKYHVIAQNENQSGNGLVDAILSIDEPGA 199

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI------EIEISESDCRID 231
           Y  LK E GVHR+ RI   ++  R HTS +++ V P + +S+      E      + RID
Sbjct: 200 YDKLKYESGVHRVQRIPATETKGRTHTSTAAVIVLPQIVESVKDAEQSERSFRPDEIRID 259

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
             RA G GGQHVNTTDSAVRITH P+G+VV  Q ERSQHKNKA+A+ +LRA+L E E ++
Sbjct: 260 VMRAGGKGGQHVNTTDSAVRITHFPSGIVVAMQDERSQHKNKAKAFAVLRARLAERERKE 319

Query: 292 REEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           +E         + T      +IR+Y   P   + D R N 
Sbjct: 320 KENSERAARKDQVTTTDRSDKIRTYNY-PQNRITDHRCNF 358


>gi|195472530|ref|XP_002088553.1| GE18626 [Drosophila yakuba]
 gi|194174654|gb|EDW88265.1| GE18626 [Drosophila yakuba]
          Length = 392

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 123/198 (62%), Gaps = 6/198 (3%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGG E+  +A  L  MYT + +   +  E       +  G++ A+L++ G +A+ W
Sbjct: 135 LNAGAGGQEAMLFAQELYEMYTGYFDHMGWNWEEFAGESTDIGGLRHASLMVSGEDAFRW 194

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHR+ R+   + + R HTS +SI V P   D I++ I+E D +I+T RASGAGG
Sbjct: 195 LRFEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IQVHIAEKDLKIETKRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR++L + +L+  E  AN   
Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVE--ANKMA 311

Query: 301 SSKTEIG---WGRQIRSY 315
           + K + G      +IR+Y
Sbjct: 312 TKKAQQGSLNRNEKIRTY 329


>gi|302307223|ref|NP_983812.2| ADL284Cp [Ashbya gossypii ATCC 10895]
 gi|299788896|gb|AAS51636.2| ADL284Cp [Ashbya gossypii ATCC 10895]
          Length = 397

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 139/247 (56%), Gaps = 29/247 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK---TEALEIHDGEEAGIKSATLLIKGP 175
           +E+  G GG E+  +   LL MY  +A+  ++K   T A E   G  AG+  A L I  P
Sbjct: 139 VELRPGVGGIEAMIFTQDLLNMYIGYAQHHRWKWSVTSATENTTG--AGLSEAILSIDEP 196

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----DDSIEIEISESDCRI 230
            +Y  LK E GVHR+ RI   +S  R HTS +++ V P +      D+ E      + RI
Sbjct: 197 GSYDRLKFESGVHRVQRIPATESKGRTHTSTAAVVVLPKMAEEAESDAYERTFKPGEIRI 256

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D  RASG GGQHVNTTDSAVRITH P+G+ +  Q+ERSQH+NKA+A+ +LRAKL +LE +
Sbjct: 257 DVMRASGKGGQHVNTTDSAVRITHFPSGIAIHMQEERSQHRNKAKAFQILRAKLADLERK 316

Query: 291 ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                    +++++++   S K        IR+Y   P   V D R  +   + ++V+ G
Sbjct: 317 EREARERSARKDQVSSTDRSDK--------IRTYNF-PQNRVTDHRCAVSLHALAEVVTG 367

Query: 342 D-LDDFM 347
           + LD+ +
Sbjct: 368 ERLDELI 374


>gi|67969776|dbj|BAE01236.1| unnamed protein product [Macaca fascicularis]
          Length = 378

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/227 (42%), Positives = 133/227 (58%), Gaps = 18/227 (7%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127
           L ELALEE      ++T D     K+ + Y + F+SLL  E  D ND  LEV +G   GG
Sbjct: 81  LQELALEE------RQTIDQ----KINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 131 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 190

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P  D+ +++++   D RIDT+RA GAGGQHVN
Sbjct: 191 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 249

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TT SAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K
Sbjct: 250 TTVSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK 296


>gi|313889382|ref|ZP_07823030.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313122214|gb|EFR45305.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 359

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 143/260 (55%), Gaps = 14/260 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLVMYQKFAESQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P ++
Sbjct: 153 ASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D +E EI   D R+D Y ASGAGGQ+VN   +AVRI HIPT + V+ Q+ER+Q KN+ +A
Sbjct: 213 D-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRIVHIPTNIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ IG G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 +L G +D+ + A +
Sbjct: 327 LQKLDTILSGKMDEIVDALI 346


>gi|322391878|ref|ZP_08065343.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
 gi|321145358|gb|EFX40754.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
          Length = 359

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|114052118|ref|NP_001040455.1| mitochondrial translational release factor 1 [Bombyx mori]
 gi|95102962|gb|ABF51422.1| mitochondrial translational release factor 1 [Bombyx mori]
          Length = 401

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 19/298 (6%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           LS +   +E+    Q +     ++ +R  L ++I  +KE+  +  D+  + ++  EE   
Sbjct: 53  LSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAI 112

Query: 83  SI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +  L+E  D+LQ I           LL          LE+ AGAGG E+  +A  L  M
Sbjct: 113 YLKRLKEIDDDLQLI-----------LLEPPLTEGGVLLELTAGAGGQEAMLFAKELFNM 161

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y  +A  + ++ +       E  G++  ++LI+G      ++ E GVHR+ RI   +   
Sbjct: 162 YQSYAINKGWEVDIASFDLTEIGGVRKGSMLIQGFGVPELMRMEAGVHRVQRIPATEKGG 221

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ + P   + IE+ I E D  I+T RASGAGGQHVNTTDSAVR+ H PTG  
Sbjct: 222 RIHTSTVTVAILPQPSE-IELNIPERDVVIETKRASGAGGQHVNTTDSAVRLIHTPTGTT 280

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           V+CQ+ RSQ KNK  A   LR  L E ++Q  E+   +    K+++G G    +IR+Y
Sbjct: 281 VECQEGRSQIKNKQIAMQKLRTLLLEKQIQ--EQALKLQSERKSQVGSGNRNEKIRTY 336


>gi|194860855|ref|XP_001969666.1| GG23822 [Drosophila erecta]
 gi|190661533|gb|EDV58725.1| GG23822 [Drosophila erecta]
          Length = 392

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 5/205 (2%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGG E+  +A  L  MYT + E   ++ E       +  G++ A+L++ G +A+ W
Sbjct: 135 LNAGAGGQEAMLFAQELYEMYTGFFEHMGWEWEEFASEITDIGGLRHASLMVSGEDAFRW 194

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHR+ R+   + + R HTS +SI V P   D I + I+E D +I+T RASGAGG
Sbjct: 195 LRHEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IHVHIAEKDLKIETKRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR++L    +Q++ E A   +
Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRL----VQQQLESAEASK 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKD 325
            +  +   G   R+  ++ Y  V+D
Sbjct: 310 MATKKAQQGSLNRNEKIRTYNFVQD 334


>gi|260944632|ref|XP_002616614.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
 gi|238850263|gb|EEQ39727.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
          Length = 406

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/273 (37%), Positives = 145/273 (53%), Gaps = 19/273 (6%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSN-DAYLEVHAGAG 126
           LLE+  E+ D  +++E ++ L+ +   V  K   SL    L     SN  A LE+  G G
Sbjct: 98  LLEIINEDLDAELVEEANEELKEVVPRV-VKASSSLKKRLLPPIVHSNKPAILELRPGVG 156

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G+E+  +   LL MY  +A    +  + L         +  A + I  P AY  L+ E G
Sbjct: 157 GSEAALFTQDLLNMYINFANYMSWPYKILSESHSSNGFLNEAIISIDAPGAYNVLRHESG 216

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-------SDCRIDTYRASGAG 239
           VHR+ RI   +S  R HTS +++ V P + D  E  + E        + RIDT R+ G G
Sbjct: 217 VHRVQRIPATESKGRIHTSTAAVVVLPKMSDGTEQSLKEDERSFAPGEIRIDTMRSGGKG 276

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA--- 296
           GQHVNTTDSAVRI HIPTG++V  Q ERSQ KNKA+A+++LR++L ++E +K  EIA   
Sbjct: 277 GQHVNTTDSAVRIVHIPTGIMVVQQDERSQPKNKAKAFSILRSRLAQMEREK--EIAEQK 334

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +     T      +IR+Y   P   V D R N
Sbjct: 335 KLRSDQVTTTDRSDKIRTYNY-PQNRVTDHRCN 366


>gi|330802966|ref|XP_003289482.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
 gi|325080440|gb|EGC33996.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
          Length = 226

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 131/218 (60%), Gaps = 13/218 (5%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY  + E++ +K E LE    E  G +  T+ I G   +G+LK E GVHR+ R+   ++ 
Sbjct: 1   MYRNYCEQKGWKFETLESQSSEVGGFRDCTISISGKGVFGFLKYESGVHRVQRVPDTETQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P   + ++++I + D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+
Sbjct: 61  GRIHTSTITVAILPEPKE-VDLQIHDRDIKVDVFRSSGNGGQSVNTTDSAVRMTHLPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIANIGESSKTEIGWGRQIR 313
           VVQ Q ERSQ +N+A+A  +LRA++YE E Q+      RE  + IG ++++E     +IR
Sbjct: 120 VVQMQDERSQLQNRAKALKILRARVYEQERQRLHSERERERNSQIGNATRSE-----RIR 174

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   + D R +I     S + +  L+ F+   L
Sbjct: 175 TYNY-PQDRITDHRVSINGNLSSCMEEEGLEGFIDEIL 211


>gi|317151025|ref|XP_001824394.2| peptide chain release factor 1 [Aspergillus oryzae RIB40]
          Length = 427

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 163/315 (51%), Gaps = 37/315 (11%)

Query: 53  DNAISFIKEIQDRLCD---NLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESL 107
           D A   I E+   L D   +L L  LA+E+ +   + L   S+NL+  K  V    F +L
Sbjct: 87  DRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTISENLK--KALVPRHPFAAL 144

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LEIHDGE-EAG 164
                      LE+  GAGG E+  +A  LLRMYT +  +R F++    LE+ DG  E  
Sbjct: 145 --------PCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLEVGDGPAEDR 196

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-------VVDD 217
           +  A + ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P        +D+
Sbjct: 197 LNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPETGGAMDN 256

Query: 218 SIEIEISESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           ++  +   SD  +D         RA GAGGQHVN T+SA+R+TH+PTG+VV  Q  RSQH
Sbjct: 257 ALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQH 316

Query: 271 KNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
            N+ +AW +LRA+L E   + RE    E+          +G G +IR+Y     +   D 
Sbjct: 317 ANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNYGQSRCT-DH 375

Query: 327 RTNIEKTSPSDVLDG 341
           R++I   + +DVLDG
Sbjct: 376 RSSITIHNLNDVLDG 390


>gi|170017816|ref|YP_001728735.1| peptide chain release factor 1 [Leuconostoc citreum KM20]
 gi|238692786|sp|B1MVN7|RF1_LEUCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169804673|gb|ACA83291.1| Peptide chain release factor 1 [Leuconostoc citreum KM20]
          Length = 357

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 178/341 (52%), Gaps = 22/341 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILLEL 75
           V R   LN +  DP +  +  +   L +E    R+ ++  + + + +QD + D   LL  
Sbjct: 12  VDRYDELNEQLADPEIAGDGQKYMALSKEAGEMRETVETYLHYQQVLQD-IADAEDLL-- 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQ 131
               DD  +     ++L  +K E E  + +  +L    D ND     +E+   AGG ES 
Sbjct: 69  ----DDAEMAPLAKEDLNTLKPEKEALESQLKILMLPKDPNDDKNIIMEIRGAAGGDESS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAADLLDMYRRYAEKQRWTLSIIDETLTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR
Sbjct: 185 RVPATETQGRVHTSTATVGVMPEFQE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E  A   E  K+ +G G  
Sbjct: 244 LVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AEYAEKRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             +IR+Y   P   V D R  +       V++G+L + + A
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDA 341


>gi|154310299|ref|XP_001554481.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
 gi|150851401|gb|EDN26594.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
          Length = 402

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 26/248 (10%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG----IKSATLLI 172
           LE+  GAGG E+  +A  LLRMY  +  +++F++  +  E  DGE AG    I    L I
Sbjct: 122 LEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYETTDGEGAGSDAPISEVVLEI 181

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----------------D 216
           +   +Y  L+GE GVHR+ R+   +   R HTS  S+ V P                  D
Sbjct: 182 ESSGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVLPSFPTTGQEGQEYWEADLND 241

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            + +  ++ +D R D  RA GAGGQHVNTTDSAVR+TH+PT  VV  Q+ RSQ +N+ +A
Sbjct: 242 PNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVPTNTVVSMQEGRSQLQNRQKA 301

Query: 277 WNMLRAKLYELELQKREE-IANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           W +LR++L   + + REE + N+  S     ++G G +IR+Y     Q V D R+ +   
Sbjct: 302 WQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIRTYNWG-QQRVTDHRSGLSVH 360

Query: 334 SPSDVLDG 341
           +  DV++G
Sbjct: 361 NLDDVMEG 368


>gi|125984748|ref|XP_001356138.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
 gi|54644457|gb|EAL33198.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
          Length = 392

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 1/173 (0%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V+AGAGG E+  +A  L  MYT + E   ++ E       +  G++ A +++ G +A+ W
Sbjct: 135 VNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIGGLRHANVMVNGADAFHW 194

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHR+ R+   +   R HTS  SI V P   D + + I+E D +I+T RASGAGG
Sbjct: 195 LRFEAGVHRVQRVPATEKAGRMHTSTVSITVIPRPAD-VHVHIAEKDLKIETKRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+A+L + +L+  E
Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELALKRLQARLVQQQLESSE 306


>gi|228477589|ref|ZP_04062222.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
 gi|228250733|gb|EEK09931.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
          Length = 359

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 ASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G LD+ + A
Sbjct: 327 LQKLDTILAGKLDEVVDA 344


>gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis
           thaliana]
          Length = 419

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 187/340 (55%), Gaps = 20/340 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82
           L+ K  DP +  N  E + L +    LD  ++  +  +D   +L ++ +L + A +++D 
Sbjct: 71  LSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDM 130

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           + +  +  N    ++E   KQ + LL  S   D+ +  LEV AG GG E+  W   L+  
Sbjct: 131 AEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVGA 190

Query: 141 YTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
                ++ +     LE+ +G    G K+  + IKG   Y  LK E GVHR+ R+   ++ 
Sbjct: 191 DVSEVQRAQL----LEVFNGFMLRGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQ 246

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P  D+ +E+ I   D  + + R+ GAGGQ+VN  ++A+ + H P+G+
Sbjct: 247 GRVHTSTATVAIMPEADE-VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGI 305

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ER+Q +NKA+A+ +LRAKLYE+++++++E   I    K+++G G    +IR+Y 
Sbjct: 306 RIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERKSQVGTGARSEKIRTYN 363

Query: 317 LQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +  ++    L+ N   T+    LDG L+D ++A  A+++
Sbjct: 364 YKDSRVTDHRLKMNFALTT---FLDGALEDAVQACAALEQ 400


>gi|312220543|emb|CBY00484.1| similar to peptide chain release factor 1 [Leptosphaeria maculans]
          Length = 418

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 144/252 (57%), Gaps = 22/252 (8%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGIK--SATLLIK 173
           LE+  GAGG+E+  +A  L RMY  +  +  F+T  L+   I+   EAG+    A L ++
Sbjct: 147 LELRPGAGGSEAAIFAGDLFRMYLAFCNRNGFRTNLLKYENINGTSEAGVPLSEAVLEVE 206

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE----------- 222
             NAYG  + E GVHR+ R+   ++  R HTS  S+ V P + ++   E           
Sbjct: 207 NDNAYGVFRCEAGVHRVQRVPATETKGRTHTSAVSVHVLPSLQENNSSEENFDDPDSDYY 266

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   + +++  RASGAGGQHVN T+SAVR+TH+PT  VV  Q  RSQHKNK +AW +LR+
Sbjct: 267 IDVKEVKVEVMRASGAGGQHVNKTESAVRLTHLPTNTVVAMQDSRSQHKNKEKAWALLRS 326

Query: 283 KLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++ +   ++R EEI+N+  S     ++G G ++R+Y     Q V D R+ +      DV+
Sbjct: 327 RIAQSRREQREEEISNMRRSVIGVAKMGRGDKVRTYNWG-QQRVTDHRSGLTVHDLDDVM 385

Query: 340 DG--DLDDFMKA 349
           +G  +L+  M++
Sbjct: 386 EGGQNLEKVMES 397


>gi|147836146|emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   LL G+ D   A L + AG  G  S+ WA  LL MYT+WAEK+ +K   +E +  + 
Sbjct: 194 EMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKN 253

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEI 221
            GIKSAT+  +    YG+L GE+GVH ++R S  +S     T  + + V P+ ++ + ++
Sbjct: 254 GGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILHEQTGSAVVDVIPLFLETAPDL 313

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I + D RI +    G        T  AV I HIPTG+ VQ   ERS   NK +A N L+
Sbjct: 314 QIDDGDLRISSPSCHGV---EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLK 370

Query: 282 AKLYELELQKREEIANIGESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           AKL    ++  + I  +G   +  I   W ++ R YV  P ++V+D++T+I+    + VL
Sbjct: 371 AKLVVTAME--QGIPEVGGIKREAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVL 428

Query: 340 DGDLDDFMKATLAIKK 355
           DG+++  + A +++++
Sbjct: 429 DGNIEPLIGANISMRQ 444


>gi|262282281|ref|ZP_06060049.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
 gi|262261572|gb|EEY80270.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
          Length = 359

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|332523754|ref|ZP_08400006.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315018|gb|EGJ28003.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 359

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 136/244 (55%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P ++D +E EI   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIED-VEYEIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G +D+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVI 342

Query: 348 KATL 351
            A +
Sbjct: 343 DALI 346


>gi|327460378|gb|EGF06715.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1057]
          Length = 359

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|290580477|ref|YP_003484869.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
 gi|254997376|dbj|BAH87977.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
          Length = 359

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 142/260 (54%), Gaps = 14/260 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++    L    D ND     LE+   AGG E+  +A  LL MY ++AE + +K E +E
Sbjct: 93  EYEEKLKFLLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAENQGWKFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  G+K    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 ASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI   D R+D Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRIIHLPTNIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKATL 351
                 +L G LD+ + A +
Sbjct: 327 LQKLDSILSGKLDEVIDALI 346


>gi|297693940|ref|XP_002824258.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Pongo abelii]
 gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 445

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 130/223 (58%), Gaps = 16/223 (7%)

Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           F+SL+  E  D ND  LEV AG   GG   Q +   +  MY  ++  + ++ E L     
Sbjct: 171 FQSLVPKEKYDKNDVILEVAAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPA 230

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217
           +  G+  A   I G   Y  LK E G+HR+ RI     +SR    HT  +S+ V P  D+
Sbjct: 231 DYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTTSVIVLPQPDE 290

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D RIDT+RA G GGQHVN TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+
Sbjct: 291 -VDVKLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAF 349

Query: 278 NMLRAKLYE--LELQKREEIANIGESSKTEIGWGRQ---IRSY 315
            +LRA+LY+  +E  KR++ +    + K ++G   Q   IR+Y
Sbjct: 350 RVLRARLYQQIIEKDKRQQQS----ARKLQVGTRAQSERIRTY 388


>gi|33864028|ref|NP_895588.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9313]
 gi|81576937|sp|Q7V518|RF1_PROMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33635612|emb|CAE21936.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9313]
          Length = 365

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 136/250 (54%), Gaps = 10/250 (4%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   D     LE+ AGAGG E+  WA  L RMY R+ ++  +  + L   + +  G +
Sbjct: 106 LPSDPRDQRSVMLEIRAGAGGNEACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFR 165

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              L IKG   +  LK E GVHR+ R+   +S  R HTS +++ V P   D++E++I  S
Sbjct: 166 ELILSIKGDAVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DAVEVQIDPS 224

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +  I T R+ GAGGQ+VN  ++AV + H PTG+ V C Q+RSQ +N+ +A  +LRAKL E
Sbjct: 225 ELEISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLE 284

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGD 342
            ++ +    AN  ESS      G   RS  ++ Y   KD RT   +     S   VL G 
Sbjct: 285 RQIAE----ANARESSTRRAQVGTGDRSEKIRTYNY-KDNRTTDHRLGRNFSLEPVLTGQ 339

Query: 343 LDDFMKATLA 352
           L++ + A +A
Sbjct: 340 LEELIGACIA 349


>gi|312863805|ref|ZP_07724043.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
 gi|311101341|gb|EFQ59546.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
          Length = 359

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 168/320 (52%), Gaps = 25/320 (7%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           N  E   + RE + +  +IS  +E+      +  L E+A EE     L+E+    +    
Sbjct: 42  NTRETVTVYREYKQVIQSISDAEEMIKEASGDPDLEEMAKEE-----LKESKAAKE---- 92

Query: 98  EVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
             EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E 
Sbjct: 93  --EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFEV 150

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E       GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P 
Sbjct: 151 MEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPE 210

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V++ +E EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ 
Sbjct: 211 VEE-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRD 269

Query: 275 QAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329
           +A  ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  
Sbjct: 270 KAMKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIG 324

Query: 330 IEKTSPSDVLDGDLDDFMKA 349
           +       +L G +D+ + A
Sbjct: 325 LTLQKLDTILAGKMDEVIDA 344


>gi|260435474|ref|ZP_05789444.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
 gi|260413348|gb|EEX06644.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
          Length = 365

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 31/347 (8%)

Query: 24  SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ----DRLCDNLILLE--- 74
           SF N + +  DP +  +    + + RER  L+  +   +E+Q    +R     +L +   
Sbjct: 16  SFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQLLKDSRG 75

Query: 75  -LALEE---DDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             A+EE   D+ + LQE    L +R+ L +       L     D     LE+ AGAGG E
Sbjct: 76  DAAMEELAQDELASLQEQHATLTERLTLAL-------LPRDPRDERSVMLEIRAGAGGDE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  WA  L RMY R+++K  +  +++   + +  G +   L ++G + Y  LK E GVHR
Sbjct: 129 ACLWAGDLARMYERYSQKVGWAVQSMSCTEADLGGFRELILSVRGESVYSQLKFEAGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++A
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLDISTARSGGAGGQNVNKVETA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V + H PTG+ V C QERSQ +N+ +A  +LRAKL    L++ +  A   ESS      G
Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERALEILRAKL----LEREQAAAAERESSDRRAQVG 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352
              RS  ++ Y   KD RT   +   +     VL+G L+D + A +A
Sbjct: 304 SGDRSEKIRTYNY-KDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIA 349


>gi|150865313|ref|XP_001384475.2| hypothetical protein PICST_58482 [Scheffersomyces stipitis CBS
           6054]
 gi|149386569|gb|ABN66446.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 376

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/182 (43%), Positives = 108/182 (59%), Gaps = 7/182 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A LE+  G GG+E+  +A  L++MY  +A   ++K   +   +G    +    + I  P 
Sbjct: 113 AILEMRPGVGGSEASLFAGDLMQMYINFANHMRWKYTIVSKSEGNGGFVNEVIMSIDTPG 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-------SDCR 229
           +Y  L+ E GVHR+ RI   +S  R HTS ++I V P + D  E  + E        + R
Sbjct: 173 SYNVLRHESGVHRVQRIPSTESKGRIHTSTAAIVVLPKMSDGNESSLKEDERQFAPGEVR 232

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RA G GGQHVNTTDSAVR+ HIPTGV V  Q ERSQ KNKA+A+++LRA+L  LE 
Sbjct: 233 IDTMRAGGKGGQHVNTTDSAVRLVHIPTGVTVMQQDERSQPKNKAKAFSILRARLAALER 292

Query: 290 QK 291
            K
Sbjct: 293 DK 294


>gi|195435374|ref|XP_002065668.1| GK14545 [Drosophila willistoni]
 gi|194161753|gb|EDW76654.1| GK14545 [Drosophila willistoni]
          Length = 397

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V++GAGG E+  +A  L  MYT + E   +  E       +  G++ A +LI   +AY W
Sbjct: 137 VNSGAGGQEAMLFAQELYEMYTSYFEHMDWDYEEFARETTDIGGLRHANILINDQDAYNW 196

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHR+ R+   + + R HTS +SI V P   D +++  +E D RI+T RASGAGG
Sbjct: 197 LRYEAGVHRVQRVPATEKSGRIHTSTASITVIPKPAD-VQVHTAEKDLRIETKRASGAGG 255

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+A+L + +L+  E
Sbjct: 256 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNREVALKRLQARLVQQQLESSE 308


>gi|193613150|ref|XP_001944471.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 400

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 126/209 (60%), Gaps = 12/209 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LE+ AG GG E+  +   L  MY  +A  + +K+E  +    E  GI+ A L++
Sbjct: 142 DCEDVMLEITAGVGGQEAMIFTQELFEMYNSFAHYKGWKSEVADYCHTEMGGIRHACLML 201

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  L+ E GVHR+ R+   + + R HTS  ++ + P   + +++ I++ D  I+T
Sbjct: 202 SGTDCYSLLQHEGGVHRVQRVPKTEKSGRIHTSTVTVAILPQPTE-LDVVINDRDLVIET 260

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVN TDSA+R+ H PTGV+V+CQ +RSQ KN+  A   LRA +Y+ +L+++
Sbjct: 261 KRASGAGGQHVNKTDSAIRMHHKPTGVIVECQTDRSQIKNRKIALQKLRAIIYKKQLEQQ 320

Query: 293 EEIA------NIGESSKTEIGWGRQIRSY 315
           + +        +G S+++E     +IR+Y
Sbjct: 321 QSLTRSARKQQVGSSARSE-----KIRTY 344


>gi|251799802|ref|YP_003014533.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
 gi|247547428|gb|ACT04447.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
          Length = 356

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 141/240 (58%), Gaps = 7/240 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+   AGG E+  +A  L RMYT++A+ + ++ E +++++ +  G K    +I
Sbjct: 106 DDKNVIVEIRGAAGGDEAALFAYELYRMYTKFADAQGWRCELMDLNENDLGGFKEVIFMI 165

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY  +K E G HR+ RI   +S  R HTS +S        + +E+EI + D RIDT
Sbjct: 166 TGKGAYSKMKYESGAHRVQRIPVTESGGRIHTS-TSTVSVMPEVEEVEVEILDKDIRIDT 224

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + +SGAGGQ VNTT SAVR+ H+PTG++  CQ  +SQ++NKA+A  +LRA++   +++++
Sbjct: 225 FCSSGAGGQSVNTTKSAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIS--DIRRQ 282

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           EE A      K ++G G    +IR+Y   P   V D R  +       V++GD+ + + +
Sbjct: 283 EEEAKYAGERKLKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSVMNGDMAEIVSS 341


>gi|24379522|ref|NP_721477.1| peptide chain release factor 1 [Streptococcus mutans UA159]
 gi|32171546|sp|Q8DU64|RF1_STRMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24377463|gb|AAN58783.1|AE014946_8 putative peptide chain release factor 1 [Streptococcus mutans
           UA159]
          Length = 359

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + +K E +E       G+K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E EI   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYEIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ +G G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVI 342

Query: 348 KATL 351
            A +
Sbjct: 343 DALI 346


>gi|157150598|ref|YP_001450441.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|172046863|sp|P47850|RF1_STRGC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157075392|gb|ABV10075.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 359

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|78211899|ref|YP_380678.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
 gi|119361630|sp|Q3AMQ9|RF1_SYNSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78196358|gb|ABB34123.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
          Length = 365

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 31/347 (8%)

Query: 24  SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ----DRLCDNLILLE--- 74
           SF N + +  DP +  +    + + RER  L+  +   +E+Q    +R     +L +   
Sbjct: 16  SFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQLLKDSRG 75

Query: 75  -LALEE---DDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             A+EE   D+ + LQE    L +R+ L +       L     D     LE+ AGAGG E
Sbjct: 76  DAAMEELAQDELASLQEQHATLTERLTLAL-------LPRDPRDERSVMLEIRAGAGGDE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  WA  L RMY R+++K  +  +++   + +  G +   L ++G + Y  LK E GVHR
Sbjct: 129 ACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++A
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLDISTARSGGAGGQNVNKVETA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V + H PTG+ V C QERSQ +N+ +A  +LRAKL    L++ +  A   ESS      G
Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERALEILRAKL----LEREQAAAAERESSDRRAQVG 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352
              RS  ++ Y   KD RT   +   +     VL+G L+D + A +A
Sbjct: 304 SGDRSEKIRTYNY-KDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIA 349


>gi|87124992|ref|ZP_01080839.1| peptide chain release factor [Synechococcus sp. RS9917]
 gi|86167312|gb|EAQ68572.1| peptide chain release factor [Synechococcus sp. RS9917]
          Length = 365

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 134/244 (54%), Gaps = 10/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AGAGG E+  WA  L RMY R+  ++ +  + +  +  +  G +   L +
Sbjct: 112 DGRSVMLEIRAGAGGDEACLWAGDLARMYERYGTRQHWTVQPVSANAADLGGYRELILSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG   +  LK E GVHR+ R+   +S  R HTS +++ V P  D  +E++I  ++  I T
Sbjct: 172 KGEAVFSKLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQIDPTELEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKLYE +L + 
Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQLAE- 289

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348
              AN  ESS      G   RS  ++ Y   KD R    +   +     VL+G LD+ + 
Sbjct: 290 ---ANARESSARRAQVGTGDRSEKIRTYN-AKDNRVTDHRLGRNFGLDPVLEGQLDEVIG 345

Query: 349 ATLA 352
           A +A
Sbjct: 346 ACIA 349


>gi|332366923|gb|EGJ44664.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1059]
          Length = 359

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|124024025|ref|YP_001018332.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964311|gb|ABM79067.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9303]
          Length = 367

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 136/250 (54%), Gaps = 10/250 (4%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   D     LE+ AGAGG E+  WA  L RMY R+ ++  +  + L   + +  G +
Sbjct: 108 LPSDPRDQRSVMLEIRAGAGGNEACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFR 167

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              L IKG   +  LK E GVHR+ R+   +S  R HTS +++ V P   D++E++I  S
Sbjct: 168 ELILSIKGDAVFSQLKFEAGVHRVQRVPTTESQGRVHTSTATVAVMPEA-DAVEVQIDPS 226

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +  I T R+ GAGGQ+VN  ++AV + H PTG+ V C Q+RSQ +N+ +A  +LRAKL E
Sbjct: 227 ELEISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLE 286

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGD 342
            ++ +    AN  ESS      G   RS  ++ Y   KD RT   +     S   VL G 
Sbjct: 287 RQIAE----ANARESSTRRAQVGTGDRSEKIRTYNY-KDNRTTDHRLGRNFSLEPVLTGQ 341

Query: 343 LDDFMKATLA 352
           L++ + A +A
Sbjct: 342 LEELIGACIA 351


>gi|325689728|gb|EGD31732.1| peptide chain release factor RF1 [Streptococcus sanguinis SK115]
          Length = 359

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|253795640|ref|YP_003038736.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739948|gb|ACT34283.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 240

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 131/235 (55%), Gaps = 9/235 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+ AG GG E+  +A+ LLRMY R+A K +++    E+  G + GIK A   + G    
Sbjct: 2   LELRAGVGGREAGLFASQLLRMYERFAAKMRWRVTLTEVSFGCDGGIKRAVADVVGEGVG 61

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            WL  E GVHR+ R+   ++  R HTS  ++ + P    S E+ +  SD +I+T RASGA
Sbjct: 62  LWLAHEAGVHRVQRVPKTETRGRVHTSTVTLALLPSAGASCELGLLNSDLKIETMRASGA 121

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITH+PTGV   C   RSQH+N+A A  +LR ++    L      A  
Sbjct: 122 GGQHVNTTDSAVRITHLPTGVTA-CASCRSQHQNRAMALKLLRERVAARALSNAAADAAG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE----KTSPSDVLDGDLDDFMKA 349
             +++   G     R++  + Y  V D  T+ +        + VLDG+L   ++A
Sbjct: 181 VRAAQVADG----ARAHRARTYSFVMDKVTDHKLGRSVVGVARVLDGELQLLVRA 231


>gi|125717977|ref|YP_001035110.1| peptide chain release factor 1 [Streptococcus sanguinis SK36]
 gi|166223611|sp|A3CN05|RF1_STRSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125497894|gb|ABN44560.1| Protein chain release factor A, putative [Streptococcus sanguinis
           SK36]
 gi|324991176|gb|EGC23110.1| peptide chain release factor RF1 [Streptococcus sanguinis SK353]
 gi|324994440|gb|EGC26353.1| peptide chain release factor RF1 [Streptococcus sanguinis SK678]
          Length = 359

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|332360425|gb|EGJ38236.1| peptide chain release factor RF1 [Streptococcus sanguinis SK355]
          Length = 359

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|328946334|gb|EGG40478.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1087]
 gi|332361225|gb|EGJ39029.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1056]
          Length = 359

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|332360650|gb|EGJ38459.1| peptide chain release factor RF1 [Streptococcus sanguinis SK49]
          Length = 359

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|323351595|ref|ZP_08087249.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|322122081|gb|EFX93807.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|324992933|gb|EGC24853.1| peptide chain release factor RF1 [Streptococcus sanguinis SK405]
 gi|325687437|gb|EGD29458.1| peptide chain release factor RF1 [Streptococcus sanguinis SK72]
 gi|325694524|gb|EGD36433.1| peptide chain release factor RF1 [Streptococcus sanguinis SK150]
 gi|325696481|gb|EGD38371.1| peptide chain release factor RF1 [Streptococcus sanguinis SK160]
 gi|327462229|gb|EGF08556.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1]
 gi|327470059|gb|EGF15523.1| peptide chain release factor RF1 [Streptococcus sanguinis SK330]
 gi|327474249|gb|EGF19656.1| peptide chain release factor RF1 [Streptococcus sanguinis SK408]
 gi|327489584|gb|EGF21376.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1058]
          Length = 359

 Score =  149 bits (376), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+Q +A  LL+MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|94988610|ref|YP_596711.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS9429]
 gi|94990486|ref|YP_598586.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10270]
 gi|94992434|ref|YP_600533.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS2096]
 gi|94994408|ref|YP_602506.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10750]
 gi|139473768|ref|YP_001128484.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
 gi|119361619|sp|Q1JBR9|RF1_STRPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361620|sp|Q1JLQ2|RF1_STRPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361621|sp|Q1JGV2|RF1_STRPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361622|sp|Q1J6M1|RF1_STRPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223610|sp|A2REH9|RF1_STRPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94542118|gb|ABF32167.1| bacterial peptide chain release factor 1 (RF-1) [Streptococcus
           pyogenes MGAS9429]
 gi|94543994|gb|ABF34042.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10270]
 gi|94545942|gb|ABF35989.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS2096]
 gi|94547916|gb|ABF37962.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10750]
 gi|134272015|emb|CAM30254.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
          Length = 359

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E +I + D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYDIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|322373126|ref|ZP_08047662.1| peptide chain release factor 1 [Streptococcus sp. C150]
 gi|321278168|gb|EFX55237.1| peptide chain release factor 1 [Streptococcus sp. C150]
          Length = 359

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 ASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + ++ EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VDYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G LD+ + A
Sbjct: 327 LQKLDTILAGKLDEVVDA 344


>gi|300175228|emb|CBK20539.2| unnamed protein product [Blastocystis hominis]
          Length = 299

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 137/253 (54%), Gaps = 16/253 (6%)

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L +   D  +  +EV AGAGG E+  +   ++ MY  +   + +K   L  +     GI
Sbjct: 37  TLFTPREDHKNCTIEVRAGAGGAEACLFTEDIMNMYKNYCSLKDWKWSVLSCNAPTGGGI 96

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K A + I G  ++G L+ E GVHR+ R+   +S  R HTS  ++ V P V++ +E  I  
Sbjct: 97  KEAIIKITGEGSFGVLRTESGVHRVQRVPETESQGRIHTSTMTVAVLPEVEN-METLIRP 155

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RID +R+SG GGQHVN T+SAVRITH+PTG+VV  Q ER+QH NKA+A  +L     
Sbjct: 156 SDLRIDLFRSSGKGGQHVNKTESAVRITHLPTGIVVSNQDERNQHMNKAKAMQIL----- 210

Query: 286 ELELQKR------EEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            + LQ R      EEI +   S      W R  + R+Y   P   + D R  +       
Sbjct: 211 AIRLQNRQNSLFNEEIDSERRSYPFAFDWARCEKNRTYNY-PNSRITDHRIGLTLYGMDK 269

Query: 338 VLDGD-LDDFMKA 349
           +++G+ LD+F  A
Sbjct: 270 MMNGELLDEFAVA 282


>gi|222153023|ref|YP_002562200.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
 gi|254790901|sp|B9DS45|RF1_STRU0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222113836|emb|CAR41933.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
          Length = 359

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY R+AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLDMYQRFAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P ++D +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIED-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G +D+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVI 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|55820816|ref|YP_139258.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55822719|ref|YP_141160.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627620|ref|YP_820239.1| peptide chain release factor 1 [Streptococcus thermophilus LMD-9]
 gi|81559540|sp|Q5M0B7|RF1_STRT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81560720|sp|Q5M4W4|RF1_STRT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122267782|sp|Q03L79|RF1_STRTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|55736801|gb|AAV60443.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55738704|gb|AAV62345.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116100897|gb|ABJ66043.1| bacterial peptide chain release factor 1 (bRF-1) [Streptococcus
           thermophilus LMD-9]
 gi|312278142|gb|ADQ62799.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03]
          Length = 359

 Score =  149 bits (375), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 ASYNGVGGIKEVVAMVSGESVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-MEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 LKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILAGKMDEVIDA 344


>gi|20139347|sp|Q9AG29|RF1_STRAG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13487345|gb|AAK27505.1|AF343879_1 peptide chain release factor 1 [Streptococcus agalactiae]
          Length = 359

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E EI + D R D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYEIDQKDLRADIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|300172696|ref|YP_003771861.1| peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887074|emb|CBL91042.1| Peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 357

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 180/347 (51%), Gaps = 34/347 (9%)

Query: 20  VQRLSFLNTKTEDPHL------WQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCDN 69
           V R   LN +  DP +      +  +++    MRE      H    +  I + +D L D 
Sbjct: 12  VDRYDELNEQLADPDVAGDGQQYMALLKEAGEMRETVEVYTHYQQVMQGISDAEDMLDD- 70

Query: 70  LILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
               E+A L ++D + L+      ++I LE + K    +L    D ND     +E+   A
Sbjct: 71  ---AEMAPLAKEDLNTLKP-----EKIVLEDQLK----ILMLPKDPNDDKNIIMEIRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ES  +A  LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E 
Sbjct: 119 GGDESSLFAADLLDMYRRYAEKQRWVVSIIDETITEVGGYKEVAIMITGDNVYSKLKFES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   ++  R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN 
Sbjct: 179 GAHRVQRVPSTETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNK 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
             +AVR+ H PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E  A   E  K+ 
Sbjct: 238 VSTAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AEYAEKRKSA 295

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +G G    +IR+Y   P   V D R  +       +++G+L + + A
Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEIVDA 341


>gi|326692970|ref|ZP_08229975.1| peptide chain release factor 1 [Leuconostoc argentinum KCTC 3773]
          Length = 357

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 179/347 (51%), Gaps = 30/347 (8%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQD--RLCDNL 70
           V R   LN +  DP +  +  +   L +E   +   +         I+EIQ+   L D+ 
Sbjct: 12  VDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQEIQEAEELLDDA 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127
            +  LA E  D + L+      ++ +LE + K    +L    D ND     +E+    GG
Sbjct: 72  EMAPLAKE--DLADLKP-----EKAQLEDQLK----ILMLPKDPNDDKNIIMEIRGAVGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G 
Sbjct: 121 DESSLFAADLLDMYRRYAEKQRWTLSIIDESMTEVGGYKEVAVMITGDNVYSKLKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  +D I+ E++ESD   + +R+ GAGGQ+VN   
Sbjct: 181 HRVQRVPSTETQGRVHTSTATVGVMPEFED-IDFELAESDLEEEFFRSGGAGGQNVNKVS 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVR+ H PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E  A   E  K+ +G
Sbjct: 240 TAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AAYAEQRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       V++G+L + + A +
Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALI 343


>gi|21910335|ref|NP_664603.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS315]
 gi|28895910|ref|NP_802260.1| peptide chain release factor 1 [Streptococcus pyogenes SSI-1]
 gi|25091126|sp|Q8K7I2|RF1_STRP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21904531|gb|AAM79406.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS315]
 gi|28811160|dbj|BAC64093.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           SSI-1]
          Length = 359

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E +I   D RID Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYDIDPKDLRIDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|218514632|ref|ZP_03511472.1| peptide chain release factor 1 [Rhizobium etli 8C-3]
          Length = 236

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 128/209 (61%), Gaps = 8/209 (3%)

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           K+ +K E L   +GE  G K     I G   +  LK E GVHR+ R+   ++  R HTS 
Sbjct: 19  KKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSA 78

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P  ++ I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV    E
Sbjct: 79  ATVAVLPEAEE-IDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSE 136

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           +SQH+N+A+A  +LR++LY+ E Q+ +  +      K+++G G    +IR+Y   P   V
Sbjct: 137 KSQHQNRAKAMQVLRSRLYDAERQRAD--SERSADRKSQVGSGDRSERIRTYNF-PQGRV 193

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            D R N+       +++G++++ + A +A
Sbjct: 194 TDHRINLTLYKLDRMMEGEIEEVVDALMA 222


>gi|327267784|ref|XP_003218679.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Anolis carolinensis]
          Length = 443

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/311 (36%), Positives = 163/311 (52%), Gaps = 32/311 (10%)

Query: 60  KEIQD--RLCDNL------ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           KE+QD   LC  L       LLELA+EE    ++       Q+I+ E+  K F+ L+  +
Sbjct: 123 KEMQDLEALCAKLNSSEEKALLELAIEEK--GVID------QKIR-ELYQKLFQILIPRD 173

Query: 112 A-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
             D  D  LEV +G   GG   Q +   +  MY  +A+ + +  E  +    E  G+  A
Sbjct: 174 KYDECDVLLEVTSGRTTGGDICQQFTKEVFDMYQNYADYKCWTFEIRKYTPSEYGGLHHA 233

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISE 225
              I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P +++ I I++  
Sbjct: 234 AAYISGDDVYRHLKYEGGIHRVQRIPETGLSSRMQRIHTGTMSVIVLPQLEE-INIKVDP 292

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RA GAGGQHVNTTDSAVRI HIPTG+ V+CQQERSQ  N+ +A   L+ KLY
Sbjct: 293 KDLRIDTFRAKGAGGQHVNTTDSAVRIVHIPTGITVECQQERSQQVNREKAMQALKDKLY 352

Query: 286 ELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +  +++  E++    + K ++G   Q   IR+Y       V D R + E      +L G 
Sbjct: 353 QQAIER--ELSQKQSARKMQLGTRSQSERIRTYNFNQ-DRVSDHRISYEVRDIKGILSGK 409

Query: 343 --LDDFMKATL 351
             LD+ +   L
Sbjct: 410 GVLDELINKLL 420


>gi|326510949|dbj|BAJ91822.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 411

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 129/215 (60%), Gaps = 12/215 (5%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   +S +  LEV AG GG E+  WA  L+RMY R+ E   +K + +   + E+ G K
Sbjct: 150 LPSDPLNSRNILLEVRAGTGGDEAGIWAGDLVRMYQRYCELNNWKFKPVSCSEAEKGGFK 209

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +  + +KG   Y  LK E GVHR+ R+   ++  R HTS +++ + P  D+ +++ I   
Sbjct: 210 TYVMEVKGKQVYSKLKFESGVHRVQRVPQTETMGRVHTSTATVAIMPEADE-VDVVIDPK 268

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  +   R+ GAGGQ+VN  ++A+ + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE
Sbjct: 269 DIELKAARSGGAGGQNVNKVETAIDLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYE 328

Query: 287 LELQKREE------IANIGESSKTEIGWGRQIRSY 315
           ++L++++E      +  +G  +++E     +IR+Y
Sbjct: 329 IKLREQQESIRTQRLLQVGTGARSE-----KIRTY 358


>gi|315304796|ref|ZP_07874958.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
 gi|313626836|gb|EFR95807.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
          Length = 229

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 11/220 (5%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           + RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ R+   
Sbjct: 1   MFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQRVPET 60

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNTT SAVR+THIP
Sbjct: 61  ESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTMSAVRLTHIP 119

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTEIGWG---RQ 311
           TG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K+ +G G    +
Sbjct: 120 TGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSAVGTGDRSER 175

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 176 IRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 214


>gi|116072171|ref|ZP_01469439.1| peptide chain release factor 1 [Synechococcus sp. BL107]
 gi|116065794|gb|EAU71552.1| peptide chain release factor 1 [Synechococcus sp. BL107]
          Length = 365

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 173/339 (51%), Gaps = 21/339 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  DP +  +    + + RER  L+  +   + +Q    + +   EL  E    + +
Sbjct: 20  LERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQVDARELLRESRSDAAM 79

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEA------DSNDAYLEVHAGAGGTESQDWANMLLR 139
           QE + N +  +LE ++      L+         D     LE+ AGAGG E+  WA  L R
Sbjct: 80  QELAQN-ELCELEAQHAALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEACIWAGDLAR 138

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ +K  +  + L   + +  G +   + +KG + +  LK E GVHR+ R+   +S 
Sbjct: 139 MYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGASVFSQLKFEAGVHRVQRVPATESQ 198

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P  D ++E+++   D  I T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 199 GRVHTSTATVAVMPEAD-AVEVQLDPKDLEISTARSGGAGGQNVNKVETAVDLLHKPTGI 257

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIGWGRQIRSYVL 317
            V C Q+RSQ +N+ +A  +LRAKL E EL    E     ESS  ++++G G   RS  +
Sbjct: 258 RVFCTQQRSQLQNRERALEILRAKLLERELAAAAE----RESSDRRSQVGSGD--RSEKI 311

Query: 318 QPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352
           + Y   KD RT   +     S   VL G L+D + A +A
Sbjct: 312 RTYNY-KDNRTTDHRLGRNFSLEPVLQGQLEDLIGACIA 349


>gi|297739884|emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 145/264 (54%), Gaps = 25/264 (9%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   LL G+ D   A L + AG  G  S+ WA  LL MYT+WAEK+ +K   +E +  + 
Sbjct: 159 EMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKN 218

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPV-VDDSIE 220
            GIKSAT+  +    YG+L GE+GVH ++R S  D  S  H + S++  V P+ ++ + +
Sbjct: 219 GGIKSATIEFESEYGYGYLSGERGVHHMIRSS--DDESILHETGSAVVDVIPLFLETAPD 276

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I + D RI +    G        T  AV I HIPTG+ VQ   ERS   NK +A N L
Sbjct: 277 LQIDDGDLRISSPSCHGV---EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRL 333

Query: 281 RAKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +AKL    ++         KRE IA++         W ++ R YV  P ++V+D++T+I+
Sbjct: 334 KAKLVVTAMEQGIPEVGGIKREAIADM---------WKQETRRYVFHPNKLVQDVKTDIQ 384

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
               + VLDG+++  + A +++++
Sbjct: 385 LPDLNSVLDGNIEPLIGANISMRQ 408


>gi|225441347|ref|XP_002274658.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 417

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 145/264 (54%), Gaps = 25/264 (9%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   LL G+ D   A L + AG  G  S+ WA  LL MYT+WAEK+ +K   +E +  + 
Sbjct: 162 EMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKN 221

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPV-VDDSIE 220
            GIKSAT+  +    YG+L GE+GVH ++R S  D  S  H + S++  V P+ ++ + +
Sbjct: 222 GGIKSATIEFESEYGYGYLSGERGVHHMIRSS--DDESILHETGSAVVDVIPLFLETAPD 279

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I + D RI +    G        T  AV I HIPTG+ VQ   ERS   NK +A N L
Sbjct: 280 LQIDDGDLRISSPSCHGV---EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRL 336

Query: 281 RAKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +AKL    ++         KRE IA++         W ++ R YV  P ++V+D++T+I+
Sbjct: 337 KAKLVVTAMEQGIPEVGGIKREAIADM---------WKQETRRYVFHPNKLVQDVKTDIQ 387

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
               + VLDG+++  + A +++++
Sbjct: 388 LPDLNSVLDGNIEPLIGANISMRQ 411


>gi|322517017|ref|ZP_08069906.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
 gi|322124434|gb|EFX95931.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
          Length = 359

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 168/320 (52%), Gaps = 25/320 (7%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           N  E   + RE + +  +IS  +E+      +  L E+A EE     L+E+    +    
Sbjct: 42  NTRETVTVYREYKQVIQSISDAEEMIKEASGDPDLEEMAKEE-----LKESKAAKE---- 92

Query: 98  EVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
             EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ + 
Sbjct: 93  --EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFDV 150

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E       GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P 
Sbjct: 151 MEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPE 210

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V++ +E EI   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ 
Sbjct: 211 VEE-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRD 269

Query: 275 QAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329
           +A  ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  
Sbjct: 270 KAMKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIG 324

Query: 330 IEKTSPSDVLDGDLDDFMKA 349
           +       +L G +D+ + A
Sbjct: 325 LTLQKLDTILAGKMDEVIDA 344


>gi|78185551|ref|YP_377985.1| peptide chain release factor 1 [Synechococcus sp. CC9902]
 gi|119361629|sp|Q3AW64|RF1_SYNS9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78169845|gb|ABB26942.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp.
           CC9902]
          Length = 365

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 137/246 (55%), Gaps = 14/246 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ AGAGG E+  WA  L RMY R+ +K  +  + L   + +  G +   + +
Sbjct: 112 DDRSVMLEIRAGAGGDEACIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG + +  LK E GVHR+ R+   +S  R HTS +++ V P  D ++E+E+   D  I T
Sbjct: 172 KGTSVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-AVEVELDPKDLEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C Q+RSQ +N+ +A  +LRAKL E EL   
Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAA 290

Query: 293 EEIANIGESS--KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDF 346
            E     ESS  ++++G G   RS  ++ Y   KD RT   +     S   VL G L+D 
Sbjct: 291 AE----RESSHRRSQVGSGD--RSEKIRTYNY-KDNRTTDHRLGRNFSLEPVLQGQLEDL 343

Query: 347 MKATLA 352
           + A +A
Sbjct: 344 IGACIA 349


>gi|19746088|ref|NP_607224.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS8232]
 gi|24418636|sp|Q8P125|RF1_STRP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19748260|gb|AAL97723.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS8232]
          Length = 359

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E +I + D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYDIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDIILSGKMDEVIDA 344


>gi|56808656|ref|ZP_00366381.1| COG0216: Protein chain release factor A [Streptococcus pyogenes M49
           591]
 gi|71903502|ref|YP_280305.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS6180]
 gi|71910676|ref|YP_282226.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS5005]
 gi|209559423|ref|YP_002285895.1| peptide chain release factor 1 [Streptococcus pyogenes NZ131]
 gi|119361623|sp|Q48TL0|RF1_STRPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238054473|sp|B5XLI8|RF1_STRPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71802597|gb|AAX71950.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS6180]
 gi|71853458|gb|AAZ51481.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS5005]
 gi|209540624|gb|ACI61200.1| Peptide chain release factor 1 [Streptococcus pyogenes NZ131]
          Length = 359

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E +I   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|15675118|ref|NP_269292.1| peptide chain release factor 1 [Streptococcus pyogenes M1 GAS]
 gi|20139346|sp|Q99ZP5|RF1_STRP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13622277|gb|AAK34013.1| putative peptide chain release factor 1 [Streptococcus pyogenes M1
           GAS]
          Length = 359

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E +I   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|331657262|ref|ZP_08358224.1| peptide chain release factor 1 [Escherichia coli TA206]
 gi|331055510|gb|EGI27519.1| peptide chain release factor 1 [Escherichia coli TA206]
          Length = 323

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 102/161 (63%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +R+SGAGGQHVNTTDSA+RITH+PTG+++  +      K K
Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGLLLNVRTNVHNIKTK 267


>gi|169833220|ref|YP_001694464.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|238688292|sp|B1IBH9|RF1_STRPI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168995722|gb|ACA36334.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 359

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ M
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVM 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|115403013|ref|XP_001217583.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189429|gb|EAU31129.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 447

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 121/218 (55%), Gaps = 21/218 (9%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGP 175
           LE+  GAGG E+  +A  LLRMYT +  +R F++  +++   + AG   +  A L ++  
Sbjct: 148 LEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSSVIKLDVADGAGDDRLTEAILEVEAN 207

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-------IEIEISESDC 228
            AY  L+ E GVHR+ R+   +S  R HTS  S+ V P   DS       + ++   SD 
Sbjct: 208 GAYDVLRTESGVHRVQRVPATESKGRTHTSAVSVMVLPSFPDSGAGSDSALNVDDPNSDY 267

Query: 229 RIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            +D         RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH N+ +AW +LR
Sbjct: 268 YVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQILR 327

Query: 282 AKLYELELQKRE----EIANIGESSKTEIGWGRQIRSY 315
           A+L E   + RE    E+          +G G +IR+Y
Sbjct: 328 ARLAEARQEAREQELVELRRGVMGGVARMGRGDKIRTY 365


>gi|219119372|ref|XP_002180448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407921|gb|EEC47856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 358

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 164/299 (54%), Gaps = 13/299 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDC 82
           L  +  DP +  +    + +M +R  ++  +   +E   +Q+ L     L + A   DD 
Sbjct: 15  LTERLADPDVINDSNLLRQVMTDRSQIEEVVMVFEEYVALQEELSGAKELFQDA--GDDP 72

Query: 83  SILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138
            + +   D ++ I+ +++  ++   +L    D NDA    LE+ AG GG+E+  +A  LL
Sbjct: 73  DMKEMARDEMKAIEPQLDSLEEKIKVLLLPKDPNDARNVMLEIRAGTGGSEANIFAGDLL 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            +Y ++   + +++  ++   G++ G K+  L IKG   Y  LK E GVHR+ R+   +S
Sbjct: 133 DVYRKYISTQGWQSNLIDSSSGDDGGYKNVVLDIKGDMVYSKLKWEAGVHRVQRVPATES 192

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ + P  D+ ++I+I   +  + T R+ GAGGQ+VN  ++AV + H PTG
Sbjct: 193 QGRVHTSTATVAIMPECDE-VDIKIDPKEIEMSTMRSGGAGGQNVNKVETAVDLLHKPTG 251

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSY 315
           + ++C QERSQ KNK  A  ML AKLY++E +KR  EE A  G    T  G   +IR+Y
Sbjct: 252 IRIKCTQERSQLKNKELAMKMLMAKLYDMENEKREMEERARRGSQVGTG-GRSEKIRTY 309


>gi|254572401|ref|XP_002493310.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033108|emb|CAY71131.1| hypothetical protein PAS_chr3_1249 [Pichia pastoris GS115]
 gi|328352673|emb|CCA39071.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435]
          Length = 405

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 127/213 (59%), Gaps = 7/213 (3%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +L+E+  S L + +  L+R+  +++ K    L   E       LE+  G GG+E+  +  
Sbjct: 105 SLKEEIESELTQAAPKLKRLTSKLKTKL---LPPHEFADKPCILELRPGIGGSEANLFTE 161

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            LL MY ++A+  ++  E +  +      G+  A ++I  P +Y  L+ E GVHR+ R+ 
Sbjct: 162 DLLSMYEKYAQHHRWSYEIISRNPHPSGNGLVDAAIVINEPGSYNRLRFEAGVHRVQRVP 221

Query: 195 PYDSNSRRHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
             +S  R HTS +++ V P +D+   S+       D RID  RASG+GGQHVNTT+SAVR
Sbjct: 222 ATESKGRTHTSTAAVVVLPKIDEDDTSLNRTFLPDDIRIDVMRASGSGGQHVNTTESAVR 281

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +THIP+G+VV  Q ERSQHKNKA+A  +L+A+L
Sbjct: 282 VTHIPSGIVVLIQDERSQHKNKAKALTILKARL 314


>gi|190348057|gb|EDK40443.2| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 139/256 (54%), Gaps = 17/256 (6%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLS 109
           LDN   +++++++       L E+  EE D  + QE    LQ +   V+   K  ++ L 
Sbjct: 98  LDNYHRYVQDMENVAA----LKEMIAEETDPEMQQEAIKELQHLVPNVQRSVKVLQARLL 153

Query: 110 GEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
                +D    LE+  G GG+E+  +   L+ MY  +A  +K+K   +         +  
Sbjct: 154 PPVSHSDKATILELRPGVGGSEAALFCGDLVNMYINFANNKKWKWTKISEGLTNSGSLNE 213

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI------ 221
             + I  P +Y  L+ E GVHR+ RI   ++  R HTS +++ V P + +  E       
Sbjct: 214 VIMSIDVPGSYNLLRHESGVHRVQRIPATETKGRIHTSTAAVVVLPKISEGTESSLKDDE 273

Query: 222 -EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            + +  + RIDT RA G GGQHVNTTDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++L
Sbjct: 274 RQFAPGEVRIDTMRAGGKGGQHVNTTDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSIL 333

Query: 281 RAKLYELELQKREEIA 296
           RA+L  LE  K  EIA
Sbjct: 334 RARLAALERDK--EIA 347


>gi|260792424|ref|XP_002591215.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
 gi|229276418|gb|EEN47226.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
          Length = 353

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 2/180 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD ND  LEV AG GG E+  + + +  MY ++A  + +  + L +      G++ AT 
Sbjct: 89  EADENDIILEVVAGVGGQEAMLFTSDMFEMYCQYAAYKNWHMQVLTMDTSTLGGLRHATA 148

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            IKG NAY  LK E GVHR+ R+   +   R HTS  ++ V P   + I+    +S+ +I
Sbjct: 149 SIKGLNAYKLLKLEAGVHRVQRVPKTEKAGRVHTSTMTVAVLPQPKE-IDNTWDKSEFKI 207

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGV-VVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +T +ASGAGGQHVN T+SAVRI HIPTG   V+CQQERSQ +N+A A   ++A+LY+++L
Sbjct: 208 ETKKASGAGGQHVNKTESAVRIVHIPTGENAVECQQERSQLRNRAIAMTTIQARLYQMKL 267


>gi|73989052|ref|XP_542584.2| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 1 [Canis familiaris]
          Length = 456

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/330 (35%), Positives = 166/330 (50%), Gaps = 49/330 (14%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQ---------DRLCDNLI------LLELALE 78
           HL  N  + K L R    L    +  +EIQ         D +C +L       L ELALE
Sbjct: 94  HLSVNEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALE 153

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWA 134
           E      Q  ++     K+ V Y + F+SL+  E  D ND  +EV +G   GG   Q + 
Sbjct: 154 ER-----QTIAE-----KINVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFT 203

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA------------GIKSATLLIKGPNAYGWLK 182
             +  MY  ++  + +K E L     +              G+  A   I G N Y  LK
Sbjct: 204 REIFDMYQNYSSYKNWKFELLNYTPADYGSDLKPCGFVIVGGLHHAAARISGDNVYKHLK 263

Query: 183 GEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            E GVHR+ RI     ++R    HT   S+ V P  D+ +++++   D RIDT+RA GAG
Sbjct: 264 YEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAG 322

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K +      
Sbjct: 323 GQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDK----CQ 378

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + S  ++  G + +S  ++ Y   +D  T+
Sbjct: 379 QQSTRKLQVGTRAQSERIRTYNFTQDRVTD 408


>gi|260171648|ref|ZP_05758060.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|299148543|ref|ZP_07041605.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|315919960|ref|ZP_07916200.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|298513304|gb|EFI37191.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|313693835|gb|EFS30670.1| peptide chain release factor 1 [Bacteroides sp. D2]
          Length = 370

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 21/345 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      + 
Sbjct: 12  DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNIL 71

Query: 77  LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E D  +    +E  DN Q  +L V  ++ + +L  +   DS +A LE+  GAGG E+ 
Sbjct: 72  ANESDAEMREMAKEEMDNSQE-RLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I     TG    ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           T +  G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351


>gi|225870517|ref|YP_002746464.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
 gi|254790898|sp|C0MC15|RF1_STRE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225699921|emb|CAW93851.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
          Length = 360

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|315222986|ref|ZP_07864865.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
 gi|315187936|gb|EFU21672.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
          Length = 359

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + +K E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|319939134|ref|ZP_08013498.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
 gi|319812184|gb|EFW08450.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
          Length = 359

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + +K E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|146415684|ref|XP_001483812.1| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 142/257 (55%), Gaps = 19/257 (7%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLS 109
           LDN   +++++++       L E+  EE D  + QE    LQ +   V+   K  ++ L 
Sbjct: 98  LDNYHRYVQDMENVAA----LKEMIAEETDPEMQQEAIKELQHLVPNVQRSVKVLQARLL 153

Query: 110 GEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK-TEALEIHDGEEAGIK 166
                +D    LE+  G GG+E+  +   L+ MY  +A  +K+K T+ LE        + 
Sbjct: 154 PPVSHSDKATILELRPGVGGSEAALFCGDLVNMYINFANNKKWKWTKILE-GLTNSGSLN 212

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI----- 221
              + I  P +Y  L+ E GVHR+ RI   ++  R HTS +++ V P + +  E      
Sbjct: 213 EVIMSIDVPGSYNLLRHESGVHRVQRIPATETKGRIHTSTAAVVVLPKISEGTESSLKDD 272

Query: 222 --EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
             + +  + RIDT RA G GGQHVNTTDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++
Sbjct: 273 ERQFAPGEVRIDTMRAGGKGGQHVNTTDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSI 332

Query: 280 LRAKLYELELQKREEIA 296
           LRA+L  LE  K  EIA
Sbjct: 333 LRARLAALERDK--EIA 347


>gi|283782510|ref|YP_003373265.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
 gi|283440963|gb|ADB19405.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
          Length = 358

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 131/236 (55%), Gaps = 7/236 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +A  +   +E+ AG GG E   +A  L +MY R+ EK+ +K E +E    +  G K   L
Sbjct: 103 DAQRSRCVMEIRAGVGGAEGALFAQDLYQMYKRFGEKKGWKVELMEASPTDMGGFKEVIL 162

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
             +G   +  L+ E G HR+ R+   ++  R HTS +++ V P  +D +E+ I   + R+
Sbjct: 163 GFEGEGVFRELQYESGGHRVQRVPETEAKGRVHTSAATVAVLPEPED-VEVNIKPDEYRL 221

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D + ASG GGQHVN T+SAVR+TH  TG+VV  Q E+SQHKN A+A  +L+++LY+   Q
Sbjct: 222 DKFCASGPGGQHVNKTESAVRLTHYETGIVVSMQDEKSQHKNLAKALRILKSRLYDFYRQ 281

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +  E A      K+ +G G    +IR+Y   P     D R  +       +++GDL
Sbjct: 282 R--EQAKRAAERKSLVGSGDRSERIRTYNF-PENRCTDHRIGLTLYKLDQIINGDL 334


>gi|195978153|ref|YP_002123397.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868513|ref|YP_002744461.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
 gi|238689817|sp|B4U317|RF1_STREM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585255|sp|C0MF07|RF1_STRS7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195974858|gb|ACG62384.1| peptide chain release factor 1 PrfA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225701789|emb|CAW99200.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 360

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D RID 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|152965225|ref|YP_001361009.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
 gi|189039977|sp|A6W7F6|RF1_KINRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151359742|gb|ABS02745.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
          Length = 355

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 152/267 (56%), Gaps = 9/267 (3%)

Query: 92  LQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           LQR   E   K    LL  + D S D  LE+ AG GG ES  +A  LLRMY R+AE+  +
Sbjct: 78  LQRAAEEAGEKLRRLLLPRDPDDSRDVILEIKAGEGGEESALFAGDLLRMYLRYAERHGW 137

Query: 151 KTEALEIHDGEEAGIKSATLLIK--GPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTS 205
            TE L+ +  +  G K  ++ +K  G  A G W  LK E GVHR+ R+   +S  R HTS
Sbjct: 138 VTEVLDANPSDLGGYKDVSVAVKTRGAAAEGVWHRLKYEGGVHRVQRVPVTESQGRVHTS 197

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
              + V     + +E+ +  +D R+D +R+SG GGQ VNTTDSAVRITH+PTGVV  CQ 
Sbjct: 198 AVGVLVV-PEAEEVEVAVDPNDLRVDVFRSSGPGGQSVNTTDSAVRITHLPTGVVATCQN 256

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVK 324
           E+SQ +N+ QA  +LRA+L+ L  +  +  A+    S+   +    ++R+Y     + + 
Sbjct: 257 EKSQLQNREQAMRILRARLHALAQEAADAQASAARRSQVRTVDRSERVRTYNYGENR-IA 315

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D RT  +  +   VLDGDLD  +++ +
Sbjct: 316 DHRTGFKAYNLDTVLDGDLDPVIQSAI 342


>gi|207109871|ref|ZP_03244033.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 130

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 92/118 (77%)

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVR
Sbjct: 1   WASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVR 60

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           ISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN   + +
Sbjct: 61  ISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKQKAVI 118


>gi|160887043|ref|ZP_02068046.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|237715527|ref|ZP_04546008.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262408537|ref|ZP_06085083.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|293369398|ref|ZP_06615983.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|294646503|ref|ZP_06724140.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294807531|ref|ZP_06766328.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|298482182|ref|ZP_07000370.1| peptide chain release factor 1 [Bacteroides sp. D22]
 gi|156107454|gb|EDO09199.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|229444236|gb|EEO50027.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262353402|gb|EEZ02496.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|292635565|gb|EFF54072.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|292638122|gb|EFF56503.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294445232|gb|EFG13902.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|295086791|emb|CBK68314.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           xylanisolvens XB1A]
 gi|298271739|gb|EFI13312.1| peptide chain release factor 1 [Bacteroides sp. D22]
          Length = 370

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 21/345 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      + 
Sbjct: 12  DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNIL 71

Query: 77  LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E D  +    +E  DN Q  +L V  ++ + +L  +   DS +A LE+  GAGG E+ 
Sbjct: 72  ANESDAEMREMAKEEMDNSQE-RLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEIVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I     TG    ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           T +  G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351


>gi|146318502|ref|YP_001198214.1| peptide chain release factor 1 [Streptococcus suis 05ZYH33]
 gi|146320693|ref|YP_001200404.1| peptide chain release factor 1 [Streptococcus suis 98HAH33]
 gi|145689308|gb|ABP89814.1| Protein chain release factor A [Streptococcus suis 05ZYH33]
 gi|145691499|gb|ABP92004.1| Protein chain release factor A [Streptococcus suis 98HAH33]
 gi|292558283|gb|ADE31284.1| Peptide chain release factor 1 [Streptococcus suis GZ1]
          Length = 364

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 181/352 (51%), Gaps = 19/352 (5%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           L  ++D   AV+ R   L     DP +  +      L +E     + ++  +E +  +  
Sbjct: 5   LMNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYK-TVLQ 63

Query: 69  NLILLELALEED--DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVH 122
           N++  E  ++E   D  + +   + L++ K + E Y++   +L    D ND     LE+ 
Sbjct: 64  NIVDAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIR 123

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK
Sbjct: 124 GAAGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLK 183

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ + P V++ +E +I   D R+D Y ASGAGGQ+
Sbjct: 184 YESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDIYHASGAGGQN 242

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGE 300
           VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ + E+ A    
Sbjct: 243 VNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDA---- 298

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
             K+ IG G    +IR+Y   P   V D R  +       +L G +D+ + A
Sbjct: 299 ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDA 349


>gi|56203458|emb|CAI18897.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 231

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/200 (45%), Positives = 118/200 (59%), Gaps = 9/200 (4%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 18  LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 77

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK 
Sbjct: 78  PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 136

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIE 331
            A   LRAKLY + L+  EEI     + K +IG  GR  +IR+Y   P   V D R N  
Sbjct: 137 LAMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKT 193

Query: 332 KTSPSDVLDGD--LDDFMKA 349
                  + GD  LD+ +++
Sbjct: 194 LHDLETFMQGDYLLDELVQS 213


>gi|223932122|ref|ZP_03624126.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|302023743|ref|ZP_07248954.1| peptide chain release factor 1 [Streptococcus suis 05HAS68]
 gi|330832776|ref|YP_004401601.1| peptide chain release factor 1 [Streptococcus suis ST3]
 gi|223899103|gb|EEF65460.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|329306999|gb|AEB81415.1| peptide chain release factor 1 [Streptococcus suis ST3]
          Length = 359

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 19/349 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           ++D   AV+ R   L     DP +  +      L +E     + ++  +E +  +  N++
Sbjct: 3   IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYK-TVLQNMV 61

Query: 72  LLELALEED--DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGA 125
             E  ++E   D  + +   + L++ K + E Y++   +L    D ND     LE+   A
Sbjct: 62  DAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAA 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E 
Sbjct: 122 GGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYES 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ + P V++ +E +I   D R+D Y ASGAGGQ+VN 
Sbjct: 182 GAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESSK 303
             +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ + E+ A      K
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDA----ERK 296

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           + IG G    +IR+Y   P   V D R  +       +L G +D+ + A
Sbjct: 297 STIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDA 344


>gi|253751628|ref|YP_003024769.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|253753530|ref|YP_003026671.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|253755645|ref|YP_003028785.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251815917|emb|CAZ51531.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|251818109|emb|CAZ55903.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251819776|emb|CAR45680.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|319758066|gb|ADV70008.1| peptide chain release factor 1 [Streptococcus suis JS14]
          Length = 359

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 19/349 (5%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           ++D   AV+ R   L     DP +  +      L +E     + ++  +E +  +  N++
Sbjct: 3   IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYK-TVLQNIV 61

Query: 72  LLELALEED--DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGA 125
             E  ++E   D  + +   + L++ K + E Y++   +L    D ND     LE+   A
Sbjct: 62  DAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAA 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E 
Sbjct: 122 GGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYES 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ + P V++ +E +I   D R+D Y ASGAGGQ+VN 
Sbjct: 182 GAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDIYHASGAGGQNVNK 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESSK 303
             +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ + E+ A      K
Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDA----ERK 296

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           + IG G    +IR+Y   P   V D R  +       +L G +D+ + A
Sbjct: 297 STIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDA 344


>gi|50914205|ref|YP_060177.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10394]
 gi|61214586|sp|Q5XC69|RF1_STRP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50903279|gb|AAT86994.1| Bacterial Peptide Chain Release Factor 1 [Streptococcus pyogenes
           MGAS10394]
          Length = 359

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E +I   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y   P   V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +++ + A
Sbjct: 327 LQKLDTILSGKMNEVIDA 344


>gi|331242267|ref|XP_003333780.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312770|gb|EFP89361.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 416

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 142/243 (58%), Gaps = 15/243 (6%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH---DGE-EAGIK 166
           E+    A +E+  G GG E+  +A +L+ +YTR A ++++  + + +     G+ + G++
Sbjct: 144 ESYDQSALVEIKPGVGGVEASHFATLLMNLYTRLATRKRWHIKPVSVEYMTSGQGQDGLR 203

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE- 225
            A L I+G   YG L+ E GVHR+ R+    + +  HTS +S+ V P+     E   SE 
Sbjct: 204 EAVLEIEGQAVYGSLRWEAGVHRVQRVPVMQNTASIHTSTASVIVLPLNPSGSEENESED 263

Query: 226 ----SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
                D +++T R+ GAGGQHVN T+SAVR+THIPTG VV  Q  RSQH+N+ +A+ +LR
Sbjct: 264 LFDEKDIKLETMRSQGAGGQHVNKTESAVRLTHIPTGTVVSMQDSRSQHQNRERAYMILR 323

Query: 282 AKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A+L +L+L  R+++    ES  +++       +IR+Y  Q  + V D R  +     +D+
Sbjct: 324 ARLLDLKL--RQKVIENRESRLSQVKNTNRSEKIRTYNFQQGR-VTDHRIGLTLPRLNDI 380

Query: 339 LDG 341
           +DG
Sbjct: 381 IDG 383


>gi|237721316|ref|ZP_04551797.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
 gi|229449112|gb|EEO54903.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
          Length = 370

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 173/345 (50%), Gaps = 21/345 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V R    +T   DP +  +      L +E + LD+ +   KE    L +      + 
Sbjct: 12  DGLVARFEETSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNIL 71

Query: 77  LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E D  +    +E  DN Q  +L V  ++ + +L  +   DS +A LE+  GAGG E+ 
Sbjct: 72  ANESDAEMREMAKEEMDNSQE-RLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I     TG    ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           T +  G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351


>gi|15900891|ref|NP_345495.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
 gi|111658249|ref|ZP_01408941.1| hypothetical protein SpneT_02000563 [Streptococcus pneumoniae
           TIGR4]
 gi|20139341|sp|Q97R20|RF1_STRPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14972493|gb|AAK75135.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|148272337|ref|YP_001221898.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166223547|sp|A5CQ48|RF1_CLAM3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147830267|emb|CAN01201.1| peptide chain release factor RF-1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/248 (39%), Positives = 140/248 (56%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+  G GG ES  +A  LLRMY  +AE R++KTE L     +  G K   + I
Sbjct: 100 DARDVIMEIKMGEGGAESALFAADLLRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAI 159

Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG    P    W  LK E GVHR+ R+   +S  R HTS + + V P V++  E+ I  +
Sbjct: 160 KGTSDDPALGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVIPEVEEVEEVAIDPN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARV-- 277

Query: 287 LELQKRE---EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  Q+ E   E + +  S    +    +IR+Y   P   + D RT  +  +   V+DG L
Sbjct: 278 LAKQQEEIDAEASAVRRSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMDGAL 336

Query: 344 DDFMKATL 351
           D  +++ +
Sbjct: 337 DPVVESCI 344


>gi|301347115|ref|ZP_07227856.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301512357|ref|ZP_07237594.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301597511|ref|ZP_07242519.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 113

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 85/110 (77%), Gaps = 1/110 (0%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKLYELE+QKR E A   E 
Sbjct: 1   HINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALED 60

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SK++IGWG QIRSYVL   + +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 61  SKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLDRFIEASL 109


>gi|149019616|ref|ZP_01834935.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|168483091|ref|ZP_02708043.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|147930991|gb|EDK81971.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|172043551|gb|EDT51597.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|301799986|emb|CBW32576.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141]
 gi|332200609|gb|EGJ14681.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|194477029|ref|YP_002049208.1| peptide chain release factor 1 [Paulinella chromatophora]
 gi|171192036|gb|ACB42998.1| peptide chain release factor 1 [Paulinella chromatophora]
          Length = 366

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 136/245 (55%), Gaps = 10/245 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D     LE+ +G GG E+  WA  L RMY R+++   ++ +AL   + E  G +   L I
Sbjct: 112 DERSVMLEIRSGTGGGEACIWAGDLARMYERYSQSVGWQVQALSSSEAELGGFRELILAI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   Y  LK E GVHR+ R+   +S  R HTS +++ V P   D +E+++   D  I T
Sbjct: 172 RGEGVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DKVEVQLDPKDIEIST 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ GAGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKL  LE Q  
Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LERQLA 288

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348
           E  A    + K ++G G   RS  ++ Y   KD RT   +     S   +L+G+L++ + 
Sbjct: 289 EAAAAESSARKAQVGTGD--RSEKIRTYNY-KDNRTTDHRLGQNFSLDSILNGNLEEIID 345

Query: 349 ATLAI 353
             +A+
Sbjct: 346 TCIAL 350


>gi|6321295|ref|NP_011372.1| Mrf1p [Saccharomyces cerevisiae S288c]
 gi|400276|sp|P30775|RF1M_YEAST RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|3972|emb|CAA42932.1| mitochondrial release factor 1 [Saccharomyces cerevisiae]
 gi|1322722|emb|CAA96855.1| MRF1 [Saccharomyces cerevisiae]
 gi|1498241|emb|CAA68219.1| MRF1 [Saccharomyces cerevisiae]
 gi|151943668|gb|EDN61978.1| mitochondrial translation release factor [Saccharomyces cerevisiae
           YJM789]
 gi|190407089|gb|EDV10356.1| mitochondrial polypeptide chain release factor [Saccharomyces
           cerevisiae RM11-1a]
 gi|207345440|gb|EDZ72262.1| YGL143Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272236|gb|EEU07227.1| Mrf1p [Saccharomyces cerevisiae JAY291]
 gi|259146366|emb|CAY79623.1| Mrf1p [Saccharomyces cerevisiae EC1118]
 gi|285812067|tpg|DAA07967.1| TPA: Mrf1p [Saccharomyces cerevisiae S288c]
 gi|323304985|gb|EGA58739.1| Mrf1p [Saccharomyces cerevisiae FostersB]
          Length = 413

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 8/174 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177
           LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E  +GI  A L I+   +
Sbjct: 157 LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 216

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230
           Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D       + E      + R+
Sbjct: 217 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 276

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           D  RASG GGQHVNTTDSAVR+THIP+G+VV  Q ERSQHKNKA+A+ +LRA+L
Sbjct: 277 DIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARL 330


>gi|289167970|ref|YP_003446239.1| peptide chain release factor I [Streptococcus mitis B6]
 gi|288907537|emb|CBJ22374.1| peptide chain release factor I [Streptococcus mitis B6]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|15902968|ref|NP_358518.1| peptide chain release factor 1 [Streptococcus pneumoniae R6]
 gi|116517153|ref|YP_816384.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|148994243|ref|ZP_01823536.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|148998842|ref|ZP_01826278.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|149003880|ref|ZP_01828703.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|149006296|ref|ZP_01830008.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|149012959|ref|ZP_01833848.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|168488841|ref|ZP_02713040.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|168491915|ref|ZP_02716058.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|168494449|ref|ZP_02718592.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|168576251|ref|ZP_02722145.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|182683968|ref|YP_001835715.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|221231773|ref|YP_002510925.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854521|ref|YP_002736033.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225856675|ref|YP_002738186.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|225858811|ref|YP_002740321.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|237650077|ref|ZP_04524329.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974]
 gi|237822154|ref|ZP_04597999.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303255576|ref|ZP_07341627.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|303260464|ref|ZP_07346432.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|303262821|ref|ZP_07348758.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265291|ref|ZP_07351201.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|303266498|ref|ZP_07352385.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|303268383|ref|ZP_07354179.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|307067803|ref|YP_003876769.1| protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|307127431|ref|YP_003879462.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|32171541|sp|Q8DPZ4|RF1_STRR6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122278730|sp|Q04KR4|RF1_STRP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691157|sp|B2IPH6|RF1_STRPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790899|sp|C1C6Z5|RF1_STRP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790900|sp|B8ZPH1|RF1_STRPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790902|sp|C1CE12|RF1_STRZJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790903|sp|C1CK98|RF1_STRZP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15458532|gb|AAK99728.1| Peptide chain release factor I [Streptococcus pneumoniae R6]
 gi|116077729|gb|ABJ55449.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|147755269|gb|EDK62320.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|147758110|gb|EDK65114.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|147762073|gb|EDK69035.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|147763112|gb|EDK70053.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|147927384|gb|EDK78415.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|182629302|gb|ACB90250.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|183572574|gb|EDT93102.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|183573754|gb|EDT94282.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183575581|gb|EDT96109.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183577929|gb|EDT98457.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|220674233|emb|CAR68768.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225720924|gb|ACO16778.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|225723680|gb|ACO19533.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225724367|gb|ACO20219.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|301794156|emb|CBW36566.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104]
 gi|301801854|emb|CBW34572.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200]
 gi|302597432|gb|EFL64527.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|302636019|gb|EFL66517.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638376|gb|EFL68843.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|302642104|gb|EFL72455.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|302643949|gb|EFL74209.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|302645156|gb|EFL75393.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|306409340|gb|ADM84767.1| Protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|306484493|gb|ADM91362.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|332073352|gb|EGI83831.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570]
 gi|332075368|gb|EGI85837.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301]
 gi|332075634|gb|EGI86102.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545]
 gi|332202882|gb|EGJ16950.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|322411678|gb|EFY02586.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 135/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ + P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G +D+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEII 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|322374351|ref|ZP_08048865.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|331266424|ref|YP_004326054.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
 gi|321279851|gb|EFX56890.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|326683096|emb|CBZ00714.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|309800291|ref|ZP_07694464.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
 gi|308116075|gb|EFO53578.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
          Length = 359

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|194387338|dbj|BAG60033.1| unnamed protein product [Homo sapiens]
          Length = 344

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 126/246 (51%), Gaps = 45/246 (18%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG                                    G++ A
Sbjct: 121 SEETDENDLILEVTAGVGG------------------------------------GLRHA 144

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 203

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + 
Sbjct: 204 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 263

Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
           L+  EEI     + K +IG  GR  +IR+Y   P   V D R N         + GD  L
Sbjct: 264 LE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLL 320

Query: 344 DDFMKA 349
           D+ +++
Sbjct: 321 DELVQS 326


>gi|116075738|ref|ZP_01472997.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
 gi|116067053|gb|EAU72808.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
          Length = 364

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 14/252 (5%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   D     LE+ AGAGG E+  WA  L RMY R+  ++ +  + +  +  +  G +
Sbjct: 106 LPSDPRDERSVMLEIRAGAGGDEACLWAGDLARMYERYGSRQGWNVQPVSANAADLGGYR 165

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              L +KG   +  LK E GVHR+ R+   +S  R HTS +++ V P  D  +E++I  +
Sbjct: 166 ELILSVKGDAVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQIDPT 224

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +  I T R+ GAGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKLYE
Sbjct: 225 ELEISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYE 284

Query: 287 LELQKREEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
            +L +          A +G   ++E     +IR+Y  +  + V D R      S   +L+
Sbjct: 285 RQLAEANAAESSARRAQVGTGDRSE-----KIRTYNAKDNR-VTDHRLG-RNFSLDPMLE 337

Query: 341 GDLDDFMKATLA 352
           G +DD + A +A
Sbjct: 338 GQMDDVIGACIA 349


>gi|317475302|ref|ZP_07934568.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
 gi|316908556|gb|EFV30244.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
          Length = 370

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 175/344 (50%), Gaps = 21/344 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   ++T   DP +  +      L +E + L + ++  KE    L       E+   E
Sbjct: 15  VARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEIIANE 74

Query: 80  DDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            D  +    +E  D  Q  + E+E +Q + LL  +   DS +A LE+  GAGG E+  +A
Sbjct: 75  TDAEMREMAREELDACQTRQPELE-EQIKLLLVPADPQDSRNAILEIRGGAGGDEAAIFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + +K +    ++G   G K     + G N YG LK E GVHR+ R+ 
Sbjct: 134 GDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR+ +
Sbjct: 194 ATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRLRY 252

Query: 255 ----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
                 TGVV    ++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT +
Sbjct: 253 NWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMV 310

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             G    +IR+Y   P   + D R N    + S  +DGD+ D +
Sbjct: 311 STGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCI 353


>gi|251782311|ref|YP_002996613.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390940|dbj|BAH81399.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127208|gb|ADX24505.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 359

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 135/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ + P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G +D+ +
Sbjct: 288 QDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEII 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|306829484|ref|ZP_07462674.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307708639|ref|ZP_07645102.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315613125|ref|ZP_07888035.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|322376710|ref|ZP_08051203.1| peptide chain release factor 1 [Streptococcus sp. M334]
 gi|304428570|gb|EFM31660.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307615213|gb|EFN94423.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315314687|gb|EFU62729.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|321282517|gb|EFX59524.1| peptide chain release factor 1 [Streptococcus sp. M334]
          Length = 359

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|148984974|ref|ZP_01818217.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
 gi|147922672|gb|EDK73789.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
          Length = 354

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|270292697|ref|ZP_06198908.1| peptide chain release factor 1 [Streptococcus sp. M143]
 gi|270278676|gb|EFA24522.1| peptide chain release factor 1 [Streptococcus sp. M143]
          Length = 359

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|119625009|gb|EAX04604.1| hCG2025689 [Homo sapiens]
          Length = 238

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/222 (41%), Positives = 127/222 (57%), Gaps = 9/222 (4%)

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+ R
Sbjct: 3   FTSEIFDMYQQYAAFKRWHFETLEYFPSEVGGLRHASASIGGSEAYRHMKFEGGVHRVQR 62

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +     HTS  ++ + P   + I + I+  D RIDT RASGAG QHVNTTDSAVRI
Sbjct: 63  VPKTEKQGCVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGEQHVNTTDSAVRI 121

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR- 310
            H+PTGVV +CQQERSQ KNK  A   LRAKLY + ++  EEI     + K +IG  GR 
Sbjct: 122 VHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHVE--EEINKRQNARKIQIGSKGRS 179

Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
            +IR+Y   P   V D R N         + GD  LD+ +++
Sbjct: 180 EKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQS 220


>gi|307704777|ref|ZP_07641673.1| peptide chain release factor 1 [Streptococcus mitis SK597]
 gi|307621686|gb|EFO00727.1| peptide chain release factor 1 [Streptococcus mitis SK597]
          Length = 359

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|307709438|ref|ZP_07645895.1| peptide chain release factor 1 [Streptococcus mitis SK564]
 gi|307619752|gb|EFN98871.1| peptide chain release factor 1 [Streptococcus mitis SK564]
          Length = 359

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|148988472|ref|ZP_01819919.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
 gi|147926153|gb|EDK77227.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
          Length = 294

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 132/243 (54%), Gaps = 13/243 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 44  DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 103

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 104 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 162

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE------ 286
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      
Sbjct: 163 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 222

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            + Q  E  + IG   ++E     +IR+Y   P   V D R  +       +L G LD+ 
Sbjct: 223 QDEQDAERKSTIGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEV 276

Query: 347 MKA 349
           + A
Sbjct: 277 VDA 279


>gi|218129333|ref|ZP_03458137.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
 gi|217988510|gb|EEC54831.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
          Length = 370

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 169/317 (53%), Gaps = 27/317 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101
           LM+ R+     +S I+E ++ + +  +  + E+A EE D C   Q   +  ++IKL +  
Sbjct: 50  LMKARKEYMQVLSGIEEAKEIIANETDAEMREMAREELDACQTRQPELE--EQIKLLL-- 105

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
                + +   DS +A LE+  GAGG E+  +A  L RMYT++ E + +K +    ++G 
Sbjct: 106 -----VPADPQDSRNAILEIRGGAGGDEAAIFAGDLFRMYTKYCETKGWKLDISSANEGA 160

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     + G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  ++
Sbjct: 161 AGGFKEIICSVTGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDV 219

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNK 273
            I+E + + DT+R+ GAGGQ+VN  +S VR+ +      TGVV    ++C + R Q KNK
Sbjct: 220 VINEGEIKWDTFRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNK 279

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A + LR  +Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N 
Sbjct: 280 ERALSRLRTFIYDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINY 336

Query: 331 EKTSPSDVLDGDLDDFM 347
              + S  +DGD+ D +
Sbjct: 337 TIYNLSAFMDGDIQDCI 353


>gi|320096082|ref|ZP_08027682.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976962|gb|EFW08705.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 366

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/243 (38%), Positives = 133/243 (54%), Gaps = 9/243 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +A LE+ AG GG ES  +A+ L RMY R+AE   +    +     E  G K  TL I
Sbjct: 106 DALNAILEIKAGEGGEESALFASDLARMYARYAEAHGWSVTEMSATRTELGGFKDVTLAI 165

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +      P+   W  LK E GVHR+ R+   +S  R HTS   ++  P ++D  ++ I  
Sbjct: 166 RAKGSPAPDEGVWAHLKYEGGVHRVQRVPVTESAGRIHTSAVGVFAMPEIEDDEDVVIDP 225

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YR+SG GGQ VNTTDSAVR+TH+P+G+VV  Q E+SQ +NK  A  +L ++L 
Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPSGIVVSMQNEKSQLQNKEAALRVLASRLA 285

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
                KRE  A+    S+   +    +IR+Y   P   + D RT  +  +   VL G LD
Sbjct: 286 AEARAKREAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDQVLGGALD 344

Query: 345 DFM 347
             +
Sbjct: 345 PVI 347


>gi|255693621|ref|ZP_05417296.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
 gi|260620597|gb|EEX43468.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
          Length = 370

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 179/346 (51%), Gaps = 23/346 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILLE- 74
           D  V R   ++T   DP +  +      L +E + LD+ +   KE IQ  L  N+   + 
Sbjct: 12  DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQ--LLGNIEEAKN 69

Query: 75  -LALEED-DCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
            LA E D D   + +   +L + +L V  ++ + +L  +   DS +A LE+  GAGG E+
Sbjct: 70  ILATESDTDIREMAKEEMDLSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+
Sbjct: 130 AIFAGDLFRMYAKYCEVKGWKLEVSNANEGTAGGYKEIVCSVTGDNVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248

Query: 251 RITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +I     TGV    +++C + R Q KNK +A   LR  +Y+ E QK   I +I    
Sbjct: 249 RLRYIWKNPNTGVSEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKR 306

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           KT +  G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 307 KTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351


>gi|328853865|gb|EGG03001.1| hypothetical protein MELLADRAFT_109720 [Melampsora larici-populina
           98AG31]
          Length = 413

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 152/268 (56%), Gaps = 21/268 (7%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE+S+NL  IK  +    F + +S       A +E+  G GG E+  +A  L+ +Y R A
Sbjct: 126 QESSNNLSNIKSRLLESLFPTPIS---HRQSALVEIKPGVGGVEAAHFATSLMNLYNRHA 182

Query: 146 EKRKFKTEALEIH---DGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            ++K+K + + +     G    G++ ATL I+G + Y  ++ E GVHR+ R+    + S 
Sbjct: 183 LRQKWKVKPVNVEFMVSGHSMDGLREATLEIEGEDVYKRMRWEAGVHRVQRVPVMQNTSS 242

Query: 202 RHTSFSSIWVY-PVVDDSIEIEI-SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            HTS +++    P   DS E  +  E D R++T R+ GAGGQHVN T+SAVR+TH+PTG+
Sbjct: 243 VHTSTAAVLPLDPGNQDSQEEALFEEKDVRMETMRSQGAGGQHVNKTESAVRLTHVPTGI 302

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE------EIANIGESSKTEIGWGRQIR 313
           VV  Q  RSQH+N+A+A+ +LRA+L +L  Q+++       ++ +  S + +     +IR
Sbjct: 303 VVSMQDSRSQHQNRARAFMILRARLSDLRNQQKQVEERGLRLSQVKTSDRNQ-----KIR 357

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +Y  Q  + V D R  +      DV++G
Sbjct: 358 TYNFQQGR-VTDHRIGLTLPRLHDVMEG 384


>gi|227431146|ref|ZP_03913202.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227353098|gb|EEJ43268.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 356

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 175/334 (52%), Gaps = 20/334 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQD-RLCDNLIL-LELA-LE 78
           LN +  DP +  N      L +E    RQ ++    + + IQD ++ + L+   E+A L 
Sbjct: 18  LNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQVAEELLGDAEMAPLA 77

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S L+   + L+      E  +   L     D  +  +E+   AGG ES  +A  LL
Sbjct: 78  KEDLSALKPEKEQLE------EQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFAADLL 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY R+AE++ +    ++    E  G K   ++I G N Y  LK E G HR+ R+   ++
Sbjct: 132 DMYRRYAERQNWSMSIIDQSTTEVGGYKEVAIMITGGNVYSKLKFESGAHRVQRVPATET 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H PTG
Sbjct: 192 QGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIHKPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           ++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E  +      K+ +G G    +IR+Y
Sbjct: 251 IMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--SEYAAQRKSAVGTGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              P   V D R  +       +++G+L + + A
Sbjct: 309 NY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDA 341


>gi|306825267|ref|ZP_07458609.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432703|gb|EFM35677.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 359

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGHSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|153807530|ref|ZP_01960198.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
 gi|149129892|gb|EDM21104.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
          Length = 370

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 19/344 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      + 
Sbjct: 12  DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLGNIEEARNIL 71

Query: 77  LEEDDCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D  + +    E   + +R+ +  E  +   + +   DS +A LE+  G GG E+  
Sbjct: 72  ANESDADMREMAKEEMDSSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGTGGDEAAI 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ R
Sbjct: 132 FAGDLFRMYAKYCETKGWKMEVSSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR+
Sbjct: 192 VPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRL 250

Query: 253 THI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            +I     TGV    +++C + R Q KNK +A   LR  +Y+ E QK   I +I    KT
Sbjct: 251 RYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRKT 308

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            +  G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLTAFMDGDIQD 351


>gi|302759769|ref|XP_002963307.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
 gi|300168575|gb|EFJ35178.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
          Length = 622

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 168/312 (53%), Gaps = 29/312 (9%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFE 105
           +E ++LD ++  IK ++ +  + + L EL  E  +D  + +  S  LQ    EV   Q +
Sbjct: 80  KELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHD 139

Query: 106 SLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            LL      EADS    LE        E +      LR+ +    +  F      + D  
Sbjct: 140 VLLELIPKDEADSRGYILE--------ELEVTKRQFLRLISSRC-RHVFLVHVECLLDFY 190

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           E   + A+ +I G   YG LK E GVHR+ R+   +   R HTS +S+ + P  ++ +++
Sbjct: 191 ECS-QEASAVISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-VDV 248

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQHKNKA+A ++L 
Sbjct: 249 EIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILY 308

Query: 282 AKLYELE----LQKREEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A+LYELE    +  R E+    IG S ++E     +IR+Y   P   V D R  + + + 
Sbjct: 309 ARLYELERSRAVASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHRVGVTQHAI 362

Query: 336 SDVLDG-DLDDF 346
             +++G D+D++
Sbjct: 363 EQIMEGIDVDNW 374


>gi|325281736|ref|YP_004254278.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
 gi|324313545|gb|ADY34098.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
          Length = 368

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 37/341 (10%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP + Q++     L +E + L+           R  D      L++EE    +L E    
Sbjct: 25  DPEVIQDMERYVRLTKEYKELETIT--------RTADKFKAALLSVEESKDILLHEEDKE 76

Query: 92  LQRIKLEVEYKQFESLLSG-------------EADSNDAYLEVHAGAGGTESQDWANMLL 138
           L+ +  E+E ++ E  L G               DS +  LE+  G GG E+  +A  L 
Sbjct: 77  LREMA-EMEIEELEDKLPGMEQELKLLLVPADPDDSKNVILEIRGGTGGDEACLFAGDLF 135

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY ++ E++ +K E    ++G   G K     + G   YG +K E GVHR+ R+   ++
Sbjct: 136 RMYAKFCERKGWKVEVTNANEGTAGGYKEIVASVTGKGVYGIMKYESGVHRVQRVPATET 195

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI--- 255
             R HTS +++ V P   ++ E+EI+E   + DT+R+ GAGGQ+VN  +S VR+ ++   
Sbjct: 196 QGRVHTSAATVAVLPEA-EAFEVEINEGAIKWDTFRSGGAGGQNVNKVESGVRLRYVWQN 254

Query: 256 P-TGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           P TGV    +++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT +  G 
Sbjct: 255 PNTGVAEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDISAKRKTMVSTGD 312

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              +IR+Y   P   V D R N    +   V+DG++D+ ++
Sbjct: 313 RSAKIRTYNY-PQGRVTDHRINFTLYNLQAVMDGEIDEIIE 352


>gi|255079106|ref|XP_002503133.1| predicted protein [Micromonas sp. RCC299]
 gi|226518399|gb|ACO64391.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 133/222 (59%), Gaps = 7/222 (3%)

Query: 98  EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           E+E K   +LL  +  D  +  LE+ AG GG E+  WA  L RMY R+A+ + +    L 
Sbjct: 97  ELEEKMTIALLPKDPLDDKNIMLEIRAGTGGDEAGIWAGDLWRMYQRYAQSKGWSATILS 156

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
            +  +  G K   + I G + Y  LK E GVHR+ R+   +S  R  TS +++ V P VD
Sbjct: 157 SNAADFGGYKEIVVEINGDSVYSELKWEAGVHRVQRVPATESQGRVQTSTATVAVMPEVD 216

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E++I + D  I + R+ GAGGQ+VN  ++A+ + H PTG+ V C +ER+Q KN+ +A
Sbjct: 217 E-VEVKIDDKDIEISSARSGGAGGQNVNKVETAIDLLHKPTGIRVFCTEERTQLKNRIRA 275

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + +LRAKL+E++L+++++   I    K ++G G    +IR+Y
Sbjct: 276 FQILRAKLFEIQLEEQQK--EIAGRRKAQVGSGARSEKIRTY 315


>gi|322385289|ref|ZP_08058934.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
 gi|321270548|gb|EFX53463.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
          Length = 359

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P +++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|322387784|ref|ZP_08061393.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
 gi|321141651|gb|EFX37147.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
          Length = 359

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|307069624|ref|YP_003878101.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
 gi|306482884|gb|ADM89755.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
          Length = 345

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 133/234 (56%), Gaps = 8/234 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+ A +GG E+  +   L +MY  +++K  +K + L        G K   + I G N+Y
Sbjct: 116 LEIRAASGGEEAALFVKDLYKMYFNFSQKNNWKIKILSFIKSNNNGYKEIIIQIYGLNSY 175

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E G HR+ RI   +S+ + HTS  +I V   + ++ +I I+  D +I T++ASGA
Sbjct: 176 SLLKNESGNHRVQRIPITESHDKVHTSTCTIAVINKIKNNKKILINNKDLKIHTFKASGA 235

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN TDSAVRI HIPT + V+CQ  RSQH NK  A  +L+ K+ ++    +  I N 
Sbjct: 236 GGQHVNKTDSAVRIFHIPTKITVECQSNRSQHINKKNALKILKYKILKIN---KNSIKNK 292

Query: 299 GES-SKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +   K+ IG G+   +IR+Y   P   V + + N+   + + +L+G+L+   K
Sbjct: 293 EDKFRKSLIGTGKRSEKIRTYNF-PQNRVTNHKINLTVYNLNSILNGNLEKIFK 345


>gi|323337560|gb|EGA78805.1| Mrf1p [Saccharomyces cerevisiae Vin13]
 gi|323348703|gb|EGA82945.1| Mrf1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 303

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 8/174 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177
           LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E  +GI  A L I+   +
Sbjct: 47  LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 106

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230
           Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D       + E      + R+
Sbjct: 107 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 166

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           D  RASG GGQHVNTTDSAVR+THIP+G+VV  Q ERSQHKNKA+A+ +LRA+L
Sbjct: 167 DIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARL 220


>gi|293365352|ref|ZP_06612069.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307703894|ref|ZP_07640835.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
 gi|291316802|gb|EFE57238.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307622729|gb|EFO01725.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
          Length = 359

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ + P V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|297570956|ref|YP_003696730.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931303|gb|ADH92111.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 370

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 14/246 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS DA +EV AG GG ES  +A  L+RMY R+AE + +  + L     E  G K   L +
Sbjct: 106 DSRDAIVEVKAGEGGEESALFAADLVRMYQRYAESKGWSVQTLSATHTELGGYKDIQLAV 165

Query: 173 KG------PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           K       P    W  LK E GVHR+ R+   +S  R HTS + + V+  VD+  E++++
Sbjct: 166 KSSSIPEDPADGVWAHLKFEAGVHRVQRVPATESQGRIHTSAAGVLVFAEVDEPEEVQVA 225

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +++ RID +R+SG GGQ VNTTDSAVRITH+PTG+ V  Q E+SQ KN+  A  +L A+L
Sbjct: 226 DNELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGITVSMQDEKSQIKNREAAMRVLLARL 285

Query: 285 YELELQKREEIANIGESSKTE---IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +L+L+  E+ A   +  +++   +    ++R+Y   P   + D RT  +  +   VL+G
Sbjct: 286 RQLQLE--EQAAKEADQRRSQVRTVDRSERVRTYNF-PENRIADHRTGYKAHNLDAVLNG 342

Query: 342 DLDDFM 347
           +L+  +
Sbjct: 343 ELEPVI 348


>gi|303283714|ref|XP_003061148.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457499|gb|EEH54798.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 404

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 27/306 (8%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQDR------LCDNLIL 72
           L  +  DP +  N  E + L +    L + +         I+E+Q+          +L +
Sbjct: 59  LTFRLADPDVASNAKEFQKLSKALGELTSVVDQYARYKECIEELQEAKAMVKDAAGDLEM 118

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E+A EE   + L E  D L+      E      L     D  +  LE+ AG GG E+  
Sbjct: 119 GEMAREE--ATALNEEMDALE------ESMTMALLPRDPLDEKNIVLEIRAGTGGDEAGI 170

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  L RMY+R+A+ + +K   L  +  +  G K   + + G + Y  LK E GVHR+ R
Sbjct: 171 WAGDLWRMYSRYADSKGWKASVLTTNPADSGGYKEIVVELVGDSVYSELKWEAGVHRVQR 230

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R  TS +++ V P VD+ +E++I + D  + T R+ GAGGQ+VN  ++AV +
Sbjct: 231 VPATESQGRIQTSTATVAVMPEVDE-VEVKIDDKDIELTTARSGGAGGQNVNKVETAVDL 289

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+ + C +ER+Q KN+ +A  +LR++L+EL+++  E+   +    K ++G G   
Sbjct: 290 VHKPTGIRIFCTEERTQLKNRIRAMQILRSRLFELQME--EQAKEVAGRRKAQVGSGARS 347

Query: 310 RQIRSY 315
            +IR+Y
Sbjct: 348 EKIRTY 353


>gi|23335364|ref|ZP_00120601.1| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 240

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 115/202 (56%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L T+   P LW +   A+ +       ++ +  +     R+ D   L+EL  EE D   L
Sbjct: 36  LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    +  I+ +++  + ++LL GE D   A + + +GAGG ++ D+A MLLRMY R+ 
Sbjct: 96  DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK + ++    EEAGIKSAT  +  P AYG L  E G HRLVRISP+D+  RR TS
Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215

Query: 206 FSSIWVYPVVDDSIEIEISESD 227
           F+++ V P+V+ +  I+I  +D
Sbjct: 216 FAAVEVVPLVEATDHIDIPYTD 237


>gi|261338133|ref|ZP_05966017.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
 gi|270276761|gb|EFA22615.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
          Length = 362

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 137/240 (57%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMYTR+AEKR +       +  E  G+K   L I
Sbjct: 104 DARDMIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVTIQSENSTELGGVKDVQLAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  LK E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 164 RAKGTVAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|221133260|ref|XP_002171178.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 205

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +QE     Q    ++E +  +S++  + D SN+A +E+ AG GG E+  +A  +L MY +
Sbjct: 19  VQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAAIFAAEMLSMYDK 78

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           ++   ++K E L+  +  + G+K  ++ I G   +G LK E GVHR+ R+   +S  R H
Sbjct: 79  YSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQRVPITESLGRVH 138

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  ++ V P   +SI++ ++  D ++DT+R+SGAGGQHVNTTDSAVR+THIP+G+VV  
Sbjct: 139 TSTVTVAVLPQ-PESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRLTHIPSGLVVAV 197

Query: 264 QQERSQ 269
           Q +RSQ
Sbjct: 198 QSQRSQ 203


>gi|306827355|ref|ZP_07460642.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
 gi|304430502|gb|EFM33524.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
          Length = 359

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%)

Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           EY++   +L    D ND     LE+   AGG E+  +A  LL MY ++AE + ++ E +E
Sbjct: 93  EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  GIK    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+
Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +E +I   D R+D Y ASGAGGQ+VN   +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A
Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271

Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
             ++RA++ +   ++ + E+ A      K+ +G G    +IR+Y     + V D R  + 
Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNFSQNR-VTDHRIGLT 326

Query: 332 KTSPSDVLDGDLDDFMKA 349
                 +L G +D+ + A
Sbjct: 327 LQKLDTILSGKMDEVIDA 344


>gi|156844661|ref|XP_001645392.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116054|gb|EDO17534.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 404

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 139/252 (55%), Gaps = 27/252 (10%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177
           +E+  G GG E+  +A  LL MY  +A  +K+K E +  ++ E  +GI  A L I  P A
Sbjct: 146 IELRPGVGGIEAMIFAQDLLNMYIGYATSKKWKHEIISRNENESGSGIVDAILSINEPGA 205

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-------ISESDCRI 230
           Y  ++ E GVHR+ R+   ++  R HTS +++ V P + +  E E           + RI
Sbjct: 206 YDRMRLEVGVHRVQRVPATETKGRTHTSTAAVVVLPQLGNGSEREAEAYERTFKPDEIRI 265

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           D  RA G GGQHVNTTDSAVR+TH P+G+V+  Q ERSQHKNKA+A+ +L++KL E+E  
Sbjct: 266 DVMRARGKGGQHVNTTDSAVRLTHFPSGIVISMQDERSQHKNKAKAFAILKSKLAEIERL 325

Query: 291 ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                    ++E+++    S K        IR+Y   P   + D R  +   + ++V+ G
Sbjct: 326 EKEEKERSARKEQVSTTDRSDK--------IRTYNY-PQNRITDHRCGLTLYALNEVITG 376

Query: 342 D-LDDFMKATLA 352
           + LD+ M    A
Sbjct: 377 ERLDEVMDVVKA 388


>gi|332027664|gb|EGI67732.1| Peptide chain release factor 1-like, mitochondrial [Acromyrmex
           echinatior]
          Length = 406

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 3/198 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +   L  MY  +A+      E ++I   +  GI+  +++I G    
Sbjct: 153 IEITAGVGGQEAMLFVKDLYDMYIDYAKCLDLDHEVIDIEMTDNKGIRHVSIMISGDQVD 212

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            + + E GVHR+ R+   + + R HTS +S+ + PV  + I+I I+E+D +I+T R+SGA
Sbjct: 213 KF-QHEGGVHRVQRVPATEKSGRVHTSTASVAILPVPSE-IQIMINENDLKIETKRSSGA 270

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITH+P+G+ V CQ +RSQ++NK  A + LR+ LYE +L K+    + 
Sbjct: 271 GGQHVNTTDSAVRITHLPSGLSVTCQVDRSQNRNKKIAMDKLRSILYEQQLNKQTSFTSK 330

Query: 299 GESSKTEIGW-GRQIRSY 315
               +  +G+   +IR+Y
Sbjct: 331 LRQKQMGMGFRNEKIRTY 348


>gi|116618873|ref|YP_819244.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270927|sp|Q03VA1|RF1_LEUMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116097720|gb|ABJ62871.1| bacterial peptide chain release factor 1 (bRF-1) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 356

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILL---ELA-L 77
           LN +  DP +  N      L +E    RQ ++    + + IQD + D   LL   E+A L
Sbjct: 18  LNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQD-IQDAEELLGDAEMAPL 76

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            ++D S L+   + L+      E  +   L     D  +  +E+   AGG ES  +A  L
Sbjct: 77  AKEDLSALKPEKEQLE------EQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFAADL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           L MY R+AE++ +    ++    E  G K   ++I G N Y  LK E G HR+ R+   +
Sbjct: 131 LDMYRRYAERQNWSMSIIDESTTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVPATE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H PT
Sbjct: 191 TQGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIHKPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E  +      K+ +G G    +IR+
Sbjct: 250 GIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--SEYAAQRKSAVGTGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           Y   P   V D R  +       +++G+L + + A
Sbjct: 308 YNY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDA 341


>gi|29349618|ref|NP_813121.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570013|ref|ZP_04847422.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298383879|ref|ZP_06993440.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
 gi|32171531|sp|Q8A011|RF1_BACTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29341528|gb|AAO79315.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840394|gb|EES68476.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298263483|gb|EFI06346.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
          Length = 370

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 23/346 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNL----I 71
           D  V R   ++T   DP +  +      L +E + LD+ +   KE IQ  L  N+     
Sbjct: 12  DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYIQ--LLGNIEEAKN 69

Query: 72  LLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L    + D   + +E  DN Q R+    E  +   + +   DS +A LE+  GAGG E+
Sbjct: 70  ILSNESDADMREMAKEEMDNSQERLPALEEEIKLMLVPADPQDSKNAILEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+
Sbjct: 130 AIFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGYKEIVCSVTGDNVYGILKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248

Query: 251 RITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +I     TGV    +++C + R Q KNK +A   LR  +Y+ E QK   I +I    
Sbjct: 249 RLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKR 306

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           KT +  G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 307 KTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351


>gi|297679454|ref|XP_002817545.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 344

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 114/199 (57%), Gaps = 17/199 (8%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 131 LEVTAGVGGGLRQASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK 
Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 249

Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            A   LRAKLY + L+    KR+    I   SK   G   +IR+Y   P   V D R N 
Sbjct: 250 LAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRIN- 304

Query: 331 EKTSPSDVLDGDLDDFMKA 349
            KT        DL+ FM+ 
Sbjct: 305 -KTL------HDLETFMRG 316


>gi|20799561|gb|AAM28548.1|AF494518_1 peptide releasing factor 1 [Tomato big bud phytoplasma]
          Length = 269

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 117/201 (58%), Gaps = 6/201 (2%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA----DSNDAYLEVHAGAGGTESQD 132
           LEE+   + +   +NL  IK++ +  Q E LL  +     D  D  +E+  G GG E+  
Sbjct: 70  LEEEIIQLAEXEKNNL-IIKIKXKTNQLEKLLYPDQYNAEDKQDVIVEIKKGIGGQEANL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           + + L R Y ++ E +K+K E + +    + GI S   +I G N + +LK E G+HR+ R
Sbjct: 129 FVSDLFRAYKKYIEYKKWKLEIINLLSTSKEGISSVEFVINGKNVFYYLKYESGIHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS   I V P  ++  +IEI+ +D R+DT+ ASG GGQ VNTT SAVR+
Sbjct: 189 IPKTENKGRIHTSTVKILVIPN-NNHQKIEINWNDIRVDTFNASGPGGQSVNTTKSAVRL 247

Query: 253 THIPTGVVVQCQQERSQHKNK 273
           TH+PTG+   CQ  +SQH NK
Sbjct: 248 THLPTGISSSCQIAKSQHDNK 268


>gi|53712203|ref|YP_098195.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60680383|ref|YP_210527.1| peptide chain release factor 1 [Bacteroides fragilis NCTC 9343]
 gi|253563758|ref|ZP_04841215.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|265765536|ref|ZP_06093811.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|61214601|sp|Q64XW5|RF1_BACFR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81316547|sp|Q5LH11|RF1_BACFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52215068|dbj|BAD47661.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60491817|emb|CAH06575.1| putative peptide chain release factor 1 [Bacteroides fragilis NCTC
           9343]
 gi|251947534|gb|EES87816.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|263254920|gb|EEZ26354.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|301161917|emb|CBW21461.1| putative peptide chain release factor 1 [Bacteroides fragilis 638R]
          Length = 370

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 178/353 (50%), Gaps = 22/353 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +     ++ 
Sbjct: 12  DGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLANIEEAKDIL 71

Query: 77  LEEDDC---SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E D     + +E  DN Q  +L V  ++ + LL  +   D  +A LE+  G GG E+ 
Sbjct: 72  SNESDADMREMAKEEMDNSQE-RLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I     TGV    +++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM-KATLA 352
           T +  G    +IR+Y   P   + D R N    + +  +DGD+ + + K T+A
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVA 359


>gi|326470521|gb|EGD94530.1| peptide chain release factor 1 [Trichophyton tonsurans CBS 112818]
          Length = 438

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 158/319 (49%), Gaps = 43/319 (13%)

Query: 53  DNAISFIKEIQDRLCDNLILLEL-ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESL 107
           D A   I E+Q  + +     EL +L EDD +     L   SD L+R    +    F  +
Sbjct: 91  DTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSSLSDTLKRAL--IPRHPFADM 148

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG- 164
                      +E+  GAGG E+  +A  +LRMYT +   R  +T    +E  DG  AG 
Sbjct: 149 --------PCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGA 200

Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------ 215
              +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P        
Sbjct: 201 EERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQE 260

Query: 216 -------DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
                  D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG V+  Q  RS
Sbjct: 261 DSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRS 320

Query: 269 QHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQM 322
           QH+N+ +AW +LRAKL +   + RE+         +G  +KT  G G +IR+Y     + 
Sbjct: 321 QHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRC 378

Query: 323 VKDLRTNIEKTSPSDVLDG 341
             D R+ +   +   V+DG
Sbjct: 379 T-DHRSGMTVHNIGKVMDG 396


>gi|298252617|ref|ZP_06976411.1| protein chain release factor A [Gardnerella vaginalis 5-1]
 gi|297532981|gb|EFH71865.1| protein chain release factor A [Gardnerella vaginalis 5-1]
          Length = 366

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 15/290 (5%)

Query: 65  RLCDNLILLELA--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +LCD+    E A  +  DD    +E     ++I    E  +   +     D+ D  +E+ 
Sbjct: 61  QLCDDF---EAANEMASDDPDFAEEAKRLEEQIPAAKEKLRTALIPRDPDDARDMIMEIK 117

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNA 177
           AG GG E+  +A  LLRMY R+AEKR + T     +  E  G+K   L I+      P  
Sbjct: 118 AGTGGEEAALFAGDLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPED 177

Query: 178 YGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYR 234
             W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI   D +ID + 
Sbjct: 178 GVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFM 237

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKRE 293
           +SG GGQ VNTT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  ++  Q+  
Sbjct: 238 SSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAA 297

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 298 EAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDL 346


>gi|300775397|ref|ZP_07085259.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
 gi|300506137|gb|EFK37273.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
          Length = 361

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 140/245 (57%), Gaps = 12/245 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSAT 169
           AD  +  +E+ AG GG E+  +   + RMYT + + + ++ E   + D  EA  G K   
Sbjct: 109 ADDKNVIVELRAGTGGDEAAIFVEDIYRMYTMYFKAKGWRHE---VTDSNEAAKGYKELI 165

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + ++G   YG +K E GVHR+ R+   +S  R HTS  ++ V P  ++ +++EI+ +D  
Sbjct: 166 MKVEGEGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVEINPADIE 224

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           + T R+ GAGGQ+VN  ++ V++TH P+G+VV CQQ RSQ  N+  A  MLRAKLY+++L
Sbjct: 225 MQTSRSGGAGGQNVNKVETKVQLTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKL 284

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           Q+ +   +I    KT +  G    +I++Y   P   V D R N    +    ++GD+ + 
Sbjct: 285 QEVQ--GDIAAQRKTMVSTGDRSAKIKTYNY-PQGRVTDHRINKSMYNLDAYMNGDISEM 341

Query: 347 MKATL 351
           + A +
Sbjct: 342 IDAVI 346


>gi|283783535|ref|YP_003374289.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
 gi|283441331|gb|ADB13797.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
          Length = 365

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 15/290 (5%)

Query: 65  RLCDNLILLELA--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +LCD+    E A  +  DD    +E     ++I    E  +   +     D+ D  +E+ 
Sbjct: 60  QLCDDF---EAANEMASDDPDFAEEAKRLEEQIPAAKEKLRTALIPRDPDDARDMIMEIK 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNA 177
           AG GG E+  +A  LLRMY R+AEKR + T     +  E  G+K   L I+      P  
Sbjct: 117 AGTGGEEAALFAGDLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPED 176

Query: 178 YGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYR 234
             W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI   D +ID + 
Sbjct: 177 GVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFM 236

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKRE 293
           +SG GGQ VNTT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  ++  Q+  
Sbjct: 237 SSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAA 296

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 297 EAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDL 345


>gi|213581389|ref|ZP_03363215.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 197

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 6/176 (3%)

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D RID
Sbjct: 3   ISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRID 62

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  K
Sbjct: 63  TFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAK 122

Query: 292 REEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           R++      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 123 RQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 175


>gi|307706536|ref|ZP_07643343.1| peptide chain release factor 1 [Streptococcus mitis SK321]
 gi|307617991|gb|EFN97151.1| peptide chain release factor 1 [Streptococcus mitis SK321]
          Length = 359

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 134/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V++ +E ++   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDLDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|229818480|ref|ZP_04448761.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
 gi|229784350|gb|EEP20464.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
          Length = 362

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMYTR+AEKR +       +  E  G+K   + I
Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWTVSVQSENTTELGGVKDVQVAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  LK E GVHR+ R+   +S  R  TS + + V+P   DD+ EI+I 
Sbjct: 164 RAKGTPAPEDGVWASLKYEGGVHRVQRVPVTESQGRIQTSAAGVIVFPEADDDNDEIDID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|50309221|ref|XP_454617.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1172907|sp|P41767|RF1M_KLULA RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|641909|gb|AAB18362.1| peptide termination factor [Kluyveromyces lactis]
 gi|49643752|emb|CAG99704.1| KLLA0E14807p [Kluyveromyces lactis]
          Length = 396

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 6/172 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLLIKGPNA 177
           LE+  G GG+E+  +   LL MY  +A   K+K   + +  +   +G+  A L I  P +
Sbjct: 140 LELRPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGS 199

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDT 232
           Y  LK E GVHR+ R+   +S  R HTS +++ V P +      D+ E      + RID 
Sbjct: 200 YDKLKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDV 259

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            RASG GGQHVNTTDSAVR+TH P+G+V+  Q+ERSQH+NKA+A+ +LRA+L
Sbjct: 260 MRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKAFAILRARL 311


>gi|170781877|ref|YP_001710209.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189039963|sp|B0RAQ5|RF1_CLAMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169156445|emb|CAQ01593.1| peptide chain release factor 1 (RF-1) [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 359

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/248 (39%), Positives = 140/248 (56%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+  G GG ES  +A  LLRMY  +AE R++KTE L     +  G K   + I
Sbjct: 100 DARDVIMEIKMGEGGAESALFAADLLRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAI 159

Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG    P    W  LK E GVHR+ R+   +S  R HTS + + V P V++  E+ +  +
Sbjct: 160 KGTSDDPALGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVIPEVEEVEEVPLDPN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++  
Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARV-- 277

Query: 287 LELQKRE---EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  Q+ E   E + +  S    +    +IR+Y   P   + D RT  +  +   V+DG L
Sbjct: 278 LAKQQEEIDAEASAVRRSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMDGAL 336

Query: 344 DDFMKATL 351
           D  +++ +
Sbjct: 337 DPVVESCI 344


>gi|114609865|ref|XP_001140693.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 4 [Pan troglodytes]
          Length = 344

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/201 (44%), Positives = 115/201 (57%), Gaps = 11/201 (5%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK 
Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 249

Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            A   LRAKLY + L+    KR+    I   SK   G   +IR+Y   P   V D R N 
Sbjct: 250 LAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINK 305

Query: 331 EKTSPSDVLDGD--LDDFMKA 349
                   + GD  LD+ +++
Sbjct: 306 TLHDLETFMQGDYLLDELVQS 326


>gi|302496498|ref|XP_003010250.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
 gi|291173792|gb|EFE29610.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
          Length = 438

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 30/258 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172
           +E+  GAGG E+  +A  +LRMYT +   R  +T    +E  DG  AG    +    + +
Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEV 211

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219
           + P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P               D + 
Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPESNQEDSPLNFDDPNS 271

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG V+  Q  RSQH+N+ +AW +
Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331

Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           LRAKL +   + RE+         +G  +KT  G G +IR+Y     +   D R+ +   
Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388

Query: 334 SPSDVLDG--DLDDFMKA 349
           +   V+DG  +L+  M++
Sbjct: 389 NIGKVMDGGENLEKIMES 406


>gi|50954441|ref|YP_061729.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|61214606|sp|Q6AG71|RF1_LEIXX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50950923|gb|AAT88624.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 358

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/248 (39%), Positives = 143/248 (57%), Gaps = 12/248 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS DA +E+  G GG ES  +A  LL MY  +A+ R++K E +E    +  GIK   +  
Sbjct: 100 DSRDAIMEIKMGEGGAESALFAGDLLSMYLHYADSRRWKAEIIEQTSSDLGGIKDVQVAF 159

Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           KG ++      +  LK E GVHR+ R+   +S  R HTS + + V+P VD+  E+EI+ +
Sbjct: 160 KGSSSDPAEGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEINPN 219

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +ID +R+SG GGQ VNTTDSAVRITH PTG+VV  Q E+SQ +N+  A  +LRA+L  
Sbjct: 220 DLKIDVFRSSGPGGQSVNTTDSAVRITHAPTGIVVSMQNEKSQLQNREAAMRVLRARL-- 277

Query: 287 LELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  Q+ E  A   E  K +I       +IR+Y   P   + D RT  +  +   V++G L
Sbjct: 278 LAKQQEEADAEAAEFRKGQIRTMERSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGAL 336

Query: 344 DDFMKATL 351
              +++ +
Sbjct: 337 GPVIESCI 344


>gi|296804966|ref|XP_002843310.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
 gi|238845912|gb|EEQ35574.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
          Length = 438

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 140/258 (54%), Gaps = 30/258 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG----IKSATLLI 172
           +E+  GAGG E+  +A  +LRMY  +   R  +T  +  E  DG  AG    +  A + I
Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYMAFCSSRGLRTAIIKKETEDGVGAGAEERLSEAVMEI 211

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---------- 222
           + P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P   D+ + +          
Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPDNNQGDSPLNFDDPNS 271

Query: 223 ---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
              ++  D + + +RASGAGGQHVN T+SAVR+THIPTG V+  Q  RSQH+N+ +AW +
Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331

Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           LRAKL +   + RE+         +G  +KT  G G +IR+Y     +   D R+ +   
Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388

Query: 334 SPSDVLDG--DLDDFMKA 349
           +   V+DG  +L+  M++
Sbjct: 389 NIGKVMDGGENLEKIMES 406


>gi|327306561|ref|XP_003237972.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
 gi|326460970|gb|EGD86423.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
          Length = 438

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 30/258 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172
           +E+  GAGG E+  +A  +LRMYT +   R  +T    +E  DG  AG    +    + +
Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEV 211

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219
           + P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P               D + 
Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNS 271

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG V+  Q  RSQH+N+ +AW +
Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331

Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           LRAKL +   + RE+         +G  +KT  G G +IR+Y     +   D R+ +   
Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388

Query: 334 SPSDVLDG--DLDDFMKA 349
           +   V+DG  +L+  M++
Sbjct: 389 NIGKVMDGGENLEKIMES 406


>gi|171741092|ref|ZP_02916899.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
 gi|171276706|gb|EDT44367.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
          Length = 362

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/282 (37%), Positives = 155/282 (54%), Gaps = 18/282 (6%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132
           E+A E+ D +   E +  L+    E+E K   +L+  + D + D  +E+ AG GG E+  
Sbjct: 67  EMASEDPDFA---EEAKRLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQ 185
           +A  LLRMY R+AEKR +       +  E  G+K   L I+      P    W  LK E 
Sbjct: 124 FAGDLLRMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEG 183

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           GVHR+ RI   +S  R  TS + + V+P   +D  EI+I   D +ID + +SG GGQ VN
Sbjct: 184 GVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVN 243

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +
Sbjct: 244 TTYSAVRMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHS 301

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           ++       +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 302 QVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|183602493|ref|ZP_02963858.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683536|ref|YP_002469919.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190567|ref|YP_002967961.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195973|ref|YP_002969528.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|254790862|sp|B8DTL4|RF1_BIFA0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183218134|gb|EDT88780.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621186|gb|ACL29343.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248959|gb|ACS45899.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250527|gb|ACS47466.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793554|gb|ADG33089.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 365

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/319 (35%), Positives = 169/319 (52%), Gaps = 14/319 (4%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +W N  + + L R +  L   ++  +   +   D     E+A E+ D +   + +  L+ 
Sbjct: 28  VWSNPDKMRKLGRRQAQLGTIVNAYRTWLNIRNDLDAAQEMAGEDPDFA---QEAKRLES 84

Query: 95  IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
              E E K   +L+  + D + D  +E+ AGAGG E+  +A  LLRMY R+AEKR +   
Sbjct: 85  ELPEAEEKLRTALIPRDPDDARDVIMEIKAGAGGEEAALFAGDLLRMYMRYAEKRGWGVT 144

Query: 154 ALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSF 206
               +  E  G+K   + I+      P    W  LK E GVHR+ RI   +S  R  TS 
Sbjct: 145 IQSENSTELGGVKDVQMAIRAKGNPSPEEGVWASLKYEGGVHRVQRIPVTESQGRIQTSA 204

Query: 207 SSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+THIPTG+VV  Q 
Sbjct: 205 AGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQD 264

Query: 266 ERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           E+SQ +N+A A  +L+++L  ++  Q+  E A++  S    +    +IR+Y   P   + 
Sbjct: 265 EKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIV 323

Query: 325 DLRTNIEKTSPSDVLDGDL 343
           D RTN +  +   VLDGDL
Sbjct: 324 DHRTNYKAYNLDAVLDGDL 342


>gi|224001842|ref|XP_002290593.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
 gi|220974015|gb|EED92345.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
          Length = 282

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 137/231 (59%), Gaps = 19/231 (8%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK----------RKFKTEALEIHDGEEA 163
           S+DA +++ AG GG E+  +A+ +L  Y   A+           + +  E L +   +  
Sbjct: 46  SSDAVIDIRAGTGGDEACLFASEILACYEATAKAGGADESGNGGKSWDLEFLSLSRTDLG 105

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE- 222
           GIK A+L++K    YG+ + E GVHR+ R+ P + N +  TS  S+ V P V DS+  E 
Sbjct: 106 GIKEASLILKQLGPYGFFQYESGVHRVQRV-PVNDN-KLQTSAVSVAVLPSVPDSLIAEA 163

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +  ++ +I+T RASGAGGQHVNTT+SAVR+THIPTG++   Q+ERSQHKNKA+A  ++ +
Sbjct: 164 LPPTELKIETMRASGAGGQHVNTTESAVRVTHIPTGIMAYMQEERSQHKNKAKALKLVAS 223

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           ++Y   L+K +E  N   +  + +G G    +IR+Y   P   + D R  +
Sbjct: 224 RVY--ALRKEQERKNRSAARSSLMGGGDRSERIRTYNF-PQDRITDHRCKV 271


>gi|329116672|ref|ZP_08245389.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
 gi|326907077|gb|EGE53991.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
          Length = 359

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 135/242 (55%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKFAESQNWRFEVMEATYNGVGGIKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ + P V++ ++ +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VDYQIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVR+ HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRMVHIPTNIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G +D+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|224538310|ref|ZP_03678849.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520095|gb|EEF89200.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 137/246 (55%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LE+  G GG E+  +A  L RMYT++ E + ++ E   +++G   G K     +
Sbjct: 112 DSKNAILEIRGGTGGDEAAIFAGDLFRMYTKYCETKGWRMEISSVNEGAAGGFKEVICSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT
Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ ++     TG    ++++C + R Q KNK +A + LR  +
Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYVWRNPNTGASEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   + +I    KT +  G    +IR+Y   P   + D R N    + S  +DG
Sbjct: 291 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 347

Query: 342 DLDDFM 347
           D+ D +
Sbjct: 348 DIQDCI 353


>gi|315047700|ref|XP_003173225.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
 gi|311343611|gb|EFR02814.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
          Length = 438

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 133/248 (53%), Gaps = 28/248 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172
           +E+  GAGG E+  +A  +LRMYT +   R  +T    +E  DG  AG    +    + +
Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGAGAGAEDRLSEVVMEV 211

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219
           + P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P               D + 
Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPESNQEDSPLNFDDPNS 271

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +  ++  D + + +RASGAGGQHVN T+SAVR+TH+PTG V+  Q  RSQH+N+ +AW +
Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHVPTGTVISMQDSRSQHENRRKAWLL 331

Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           LRAKL +   + RE+         +G  +KT  G G +IR+Y     +   D R+ +   
Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388

Query: 334 SPSDVLDG 341
           +   V+DG
Sbjct: 389 NIGKVMDG 396


>gi|322801718|gb|EFZ22324.1| hypothetical protein SINV_03599 [Solenopsis invicta]
          Length = 300

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 122/200 (61%), Gaps = 7/200 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +   L  MY  +A+      E +++   +  GI+  +++I G N  
Sbjct: 46  IEITAGVGGQEAMLFVKDLYDMYLGYAKYLDLDHEIIDMEVTDNKGIRHVSVIISG-NQV 104

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
              + E GVHR+ R+   +  SR HTS +S+ + PV  + I+I I+E D +I+T R+SGA
Sbjct: 105 DKFQHEGGVHRVQRVPATERLSRVHTSTASVAILPVPSE-IQIMINEKDLKIETKRSSGA 163

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITH+P+GV V C+  RSQ KN+  A + L++ LYE +L K+    + 
Sbjct: 164 GGQHVNTTDSAVRITHLPSGVSVTCEVHRSQDKNRKMAMDKLKSVLYERQLNKQTSFTS- 222

Query: 299 GESSKTEIGWG---RQIRSY 315
            E  + ++G G    +IR+Y
Sbjct: 223 -ELRQKQMGMGFRNEKIRTY 241


>gi|189467991|ref|ZP_03016776.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
 gi|189436255|gb|EDV05240.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
          Length = 370

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 137/244 (56%), Gaps = 15/244 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LE+  G GG E+  +A  L RMYT++ E + +K E   +++G   G K     +
Sbjct: 112 DSKNAILEIRGGTGGDEAAIFAGDLFRMYTKFCETKGWKMEISSVNEGAAGGFKEIICSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT
Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHI---P-TGV----VVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ ++   P TGV    +++C + R Q KNK +A + LR  +
Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   + +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 291 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347

Query: 342 DLDD 345
           D+ D
Sbjct: 348 DIQD 351


>gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos
           saltator]
          Length = 362

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 7/200 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +   L  MY  +AE      E L++   +  G ++ T+++ G    
Sbjct: 109 IEITAGVGGQEAMLFVKNLYEMYIGYAEYLGLCHEVLDMDTTDCNGYRNVTIIVSGKQTS 168

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            + + E GVHR+ R+   +   R HTS +S+ + P+  + +EI I+E D +I+T RASG+
Sbjct: 169 KF-RYEGGVHRVQRVPTTEKLGRVHTSTASVAILPIPSE-VEIVINERDLKIETKRASGS 226

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITHIPTG++V+CQ  RSQ +NK  A   LR  +YE +L K+    + 
Sbjct: 227 GGQHVNKTNSAVRITHIPTGLIVECQVHRSQIRNKKLAMMRLRNMMYEQQLNKQTSFRS- 285

Query: 299 GESSKTEIGWG---RQIRSY 315
            E  K +IG G    ++R+Y
Sbjct: 286 -ELRKKQIGMGFRNEKVRTY 304


>gi|283455530|ref|YP_003360094.1| peptide chain release factor 1 [Bifidobacterium dentium Bd1]
 gi|283102164|gb|ADB09270.1| prfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium dentium Bd1]
          Length = 340

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/282 (37%), Positives = 155/282 (54%), Gaps = 18/282 (6%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132
           E+A E+ D +   E +  L+    E+E K   +L+  + D + D  +E+ AG GG E+  
Sbjct: 45  EMASEDPDFA---EEAKRLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAAL 101

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQ 185
           +A  LLRMY R+AEKR +       +  E  G+K   L I+      P    W  LK E 
Sbjct: 102 FAGDLLRMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEG 161

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           GVHR+ RI   +S  R  TS + + V+P   +D  EI+I   D +ID + +SG GGQ VN
Sbjct: 162 GVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVN 221

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +
Sbjct: 222 TTYSAVRMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHS 279

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           ++       +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 280 QVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 320


>gi|255007722|ref|ZP_05279848.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313145421|ref|ZP_07807614.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313134188|gb|EFR51548.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
          Length = 370

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 178/353 (50%), Gaps = 22/353 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +     ++ 
Sbjct: 12  DGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYMQLLANIEEAKDIL 71

Query: 77  LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E D  +    +E  DN Q  +L V  ++ + LL  +   D  +A LE+  G GG E+ 
Sbjct: 72  SNESDTDMREMAKEEMDNSQE-RLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I     TGV    +++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM-KATLA 352
           T +  G    +IR+Y   P   + D R N    + +  +DGD+ + + K T+A
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVA 359


>gi|332213669|ref|XP_003255947.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 3 [Nomascus leucogenys]
          Length = 344

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/201 (44%), Positives = 115/201 (57%), Gaps = 11/201 (5%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 190

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK 
Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 249

Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            A   LRAKLY + L+    KR+    I   SK   G   +IR+Y   P   V D R N 
Sbjct: 250 LAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINR 305

Query: 331 EKTSPSDVLDGD--LDDFMKA 349
                   + GD  LD+ +++
Sbjct: 306 TLHDLETFMQGDYLLDELVQS 326


>gi|145627801|ref|ZP_01783602.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979576|gb|EDJ89235.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 174

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 105/164 (64%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ IK ++  L
Sbjct: 7   LQCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQALGKERVSLEQVVNTIKNLEQGL 66

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  +  GE D+ D Y+++ AG+G
Sbjct: 67  EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFGGEHDACDCYVDLQAGSG 126

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+
Sbjct: 127 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATI 170


>gi|302653122|ref|XP_003018392.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
 gi|291182035|gb|EFE37747.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
          Length = 438

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 133/248 (53%), Gaps = 28/248 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172
           +E+  GAGG E+  +A  +LRMYT +   R  +T    +E  DG  AG    +    + +
Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEV 211

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219
           + P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P               D + 
Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNS 271

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG V+  Q  RSQH+N+ +AW +
Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331

Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           LRAKL +   + RE+         +G  +KT  G G +IR+Y     +   D R+ +   
Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388

Query: 334 SPSDVLDG 341
           +   V+DG
Sbjct: 389 NIGKVMDG 396


>gi|320334062|ref|YP_004170773.1| peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
 gi|319755351|gb|ADV67108.1| Peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
          Length = 362

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 139/254 (54%), Gaps = 18/254 (7%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D +D  +E+ AGAGG E+  +A  LL MY R+AE    K   L+ ++ +  G+   T  +
Sbjct: 104 DPHDCIVEIRAGAGGDEAALFAADLLSMYERYAEGAGLKLAVLDANESDLGGLSKVTFEV 163

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+   + E+GVHR+ R+   ++  R HTS  ++ V P V+D+ E+++  S+ RID 
Sbjct: 164 TGDGAFRAFRFERGVHRVQRVPATETQGRIHTSTVTVAVLPQVEDA-EVDLDLSEVRIDV 222

Query: 233 YRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +R+ GAGGQ VNTTDSAVR  +    P  +VV CQ  RSQ KN+ +A  +LRA+L E E 
Sbjct: 223 FRSQGAGGQGVNTTDSAVRAVYRPGTPDEIVVVCQDGRSQIKNREKALVVLRARLAERER 282

Query: 290 QKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKD--LRTNIEKTSPSDVLDG 341
             RE        A +G   ++E     +IR+Y   P   V D  L  +++      V+ G
Sbjct: 283 AVREAQERADRAAQVGSGDRSE-----KIRTYNY-PQNRVTDHRLSGDVKNFPLETVVAG 336

Query: 342 DLDDFMKATLAIKK 355
            L   + A + +++
Sbjct: 337 GLAPLIAALVNVER 350


>gi|212716435|ref|ZP_03324563.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660688|gb|EEB21263.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
          Length = 383

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 137/242 (56%), Gaps = 14/242 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMY R+AEKR +       +  E  G+K   L I
Sbjct: 125 DARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGWSVAVQSENTTELGGVKDVQLAI 184

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  LK E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 185 RAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 244

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D +ID + +SG GGQ VNTT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L
Sbjct: 245 QKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 304

Query: 285 YELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             L ++  EE A   +   +++       +IR+Y   P   + D RTN +  +   VLDG
Sbjct: 305 --LAMKHEEEAAQAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDG 361

Query: 342 DL 343
           DL
Sbjct: 362 DL 363


>gi|26346685|dbj|BAC36991.1| unnamed protein product [Mus musculus]
          Length = 446

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 7/194 (3%)

Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
            E L+  E  D +D  LEV +G   GG   Q +   +  MY  ++  + +K E L     
Sbjct: 172 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 231

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217
           +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  D+
Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A 
Sbjct: 292 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 350

Query: 278 NMLRAKLYELELQK 291
            +LRA+LY+  ++K
Sbjct: 351 RVLRARLYQQIIEK 364


>gi|270132345|ref|NP_666072.3| peptide chain release factor 1, mitochondrial precursor [Mus
           musculus]
 gi|27151667|sp|Q8K126|RF1M_MOUSE RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|20810364|gb|AAH28898.1| Mitochondrial translational release factor 1 [Mus musculus]
 gi|26336078|dbj|BAC31724.1| unnamed protein product [Mus musculus]
 gi|148703819|gb|EDL35766.1| mitochondrial translational release factor 1, isoform CRA_a [Mus
           musculus]
          Length = 446

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 7/194 (3%)

Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
            E L+  E  D +D  LEV +G   GG   Q +   +  MY  ++  + +K E L     
Sbjct: 172 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 231

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217
           +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  D+
Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A 
Sbjct: 292 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 350

Query: 278 NMLRAKLYELELQK 291
            +LRA+LY+  ++K
Sbjct: 351 RVLRARLYQQIIEK 364


>gi|116198067|ref|XP_001224845.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
 gi|88178468|gb|EAQ85936.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
          Length = 400

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 165/334 (49%), Gaps = 32/334 (9%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ--R 94
           +N  +AK   R  + L    S +KE++ +    L+ L+  LE +D  + +   D+L+   
Sbjct: 30  ENDFDAKKAKRAGE-LSRVASAVKELE-KAKAALVELQGLLESNDAEMRELARDDLEATN 87

Query: 95  IKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            +L          L+ +    D    LE+  G GG E + +A+ L +MY  +   + ++T
Sbjct: 88  AQLAESSHNLSVALTPKHPFADMPCLLEIRPGPGGLEGRFFADSLFQMYKAYCSNKGYRT 147

Query: 153 EALEIH----DGE-----EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
             ++      DG      E  ++ A L ++   AYG  +GE G+HR+ R+   + + R H
Sbjct: 148 RIVQYEASDSDGSTGSEGEIPLQEAVLEVQEEGAYGLFRGEAGMHRVQRVPATEKSGRTH 207

Query: 204 TSFSSIWVYP------VVDDSIEIEISESDCRID-------TYRASGAGGQHVNTTDSAV 250
           TS  ++WV P        D   + +  ESD  ID       T RA GAGGQHVN T+SA+
Sbjct: 208 TSAVAVWVLPSFPENGTSDSEADWDKPESDFYIDPNEVRSETMRAGGAGGQHVNKTESAI 267

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIG 307
           R+THIPTG  V  Q  RSQ +N+  AW +LR++L +   + REE A    SS    ++I 
Sbjct: 268 RLTHIPTGTTVSMQDSRSQQRNREDAWRLLRSRLAQQRREAREEQARQLRSSVLANSQIT 327

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            G +IR+Y  Q      D R+ +   +  DVL G
Sbjct: 328 RGDKIRTYQYQ-QDRCTDHRSGLNTHNLPDVLRG 360


>gi|148703820|gb|EDL35767.1| mitochondrial translational release factor 1, isoform CRA_b [Mus
           musculus]
          Length = 440

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 7/194 (3%)

Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
            E L+  E  D +D  LEV +G   GG   Q +   +  MY  ++  + +K E L     
Sbjct: 190 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 249

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217
           +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  D+
Sbjct: 250 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 309

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A 
Sbjct: 310 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 368

Query: 278 NMLRAKLYELELQK 291
            +LRA+LY+  ++K
Sbjct: 369 RVLRARLYQQIIEK 382


>gi|297243816|ref|ZP_06927746.1| protein chain release factor A [Gardnerella vaginalis AMD]
 gi|296888237|gb|EFH26979.1| protein chain release factor A [Gardnerella vaginalis AMD]
          Length = 365

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 137/240 (57%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMY R+AEKR + T     +  E  G+K   L I
Sbjct: 107 DACDMIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAI 166

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 167 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 226

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L
Sbjct: 227 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 286

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 287 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDL 345


>gi|306823422|ref|ZP_07456797.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|309802666|ref|ZP_07696770.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
 gi|304553129|gb|EFM41041.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|308220730|gb|EFO77038.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
          Length = 362

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/265 (38%), Positives = 144/265 (54%), Gaps = 20/265 (7%)

Query: 96  KLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +LE E  +FE  L          D+ D  +E+ AG GG E+  +A  LLRMY R+AEKR 
Sbjct: 81  RLENELPEFEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRG 140

Query: 150 FKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRR 202
           +       +  E  G+K   L I+      P    W  LK E GVHR+ RI   +S  R 
Sbjct: 141 WAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRI 200

Query: 203 HTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            TS + + V+P   +D  EI+I   D +ID + +SG GGQ VNTT SAVR+THIPTG+VV
Sbjct: 201 QTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVV 260

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQ 318
             Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++       +IR+Y   
Sbjct: 261 SMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRSERIRTYNF- 317

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDL 343
           P   + D RTN +  +   VLDGDL
Sbjct: 318 PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|241998776|ref|XP_002434031.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215495790|gb|EEC05431.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 356

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 127/217 (58%), Gaps = 5/217 (2%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  LEV AG GG E+  +   +L MY R+A  + +    ++    +  G++ A+L +
Sbjct: 101 DTTEVLLEVTAGVGGQEAMLFTKDVLDMYVRYASWKGWSCRIVDYETSDMGGVRHASLNV 160

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G +A   LK E GVHR+ R+   +   R HTS  ++ V P+  + +++ ++  D  + T
Sbjct: 161 GGRDAGKCLKFESGVHRVQRVPQTERAGRIHTSTMAVAVLPLPAE-VDVVLNSKDLVMKT 219

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQHVNTT+SAV+I HIP+G++V+  QERSQ +NK  A   LRAKLYE+EL K+
Sbjct: 220 KRASGPGGQHVNTTESAVQIQHIPSGIMVESSQERSQLQNKELALKKLRAKLYEIELNKK 279

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
                    ++ ++  G + RS  ++ Y   +D  T+
Sbjct: 280 TS----SHVTQRKLQVGTRGRSEKIRTYNFAQDRVTD 312


>gi|258566533|ref|XP_002584011.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237907712|gb|EEP82113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 412

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 23/245 (9%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG-----IKSATLL 171
           +E+  GAGG E+  +A+ LLRMY     +R F+T  L  +  DG  +G     +  A + 
Sbjct: 125 VEIRPGAGGAEASLFASELLRMYLAVCSRRGFRTTILKKDTEDGYGSGGSEDLLSEAVVE 184

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----DDSIEIEISESD 227
           I+ P +Y   + E GVHR+ RI   ++  R HTS  S+ + P      D ++  +   SD
Sbjct: 185 IETPRSYDIFRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFPEQNDGALNFDDPNSD 244

Query: 228 CRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             I+         RASGAGGQHVN T+SAVR+THIPTG VV  Q  RSQH+N+ +AW +L
Sbjct: 245 YYINPQEVQSEKMRASGAGGQHVNKTESAVRLTHIPTGTVVAVQDTRSQHENRRKAWRLL 304

Query: 281 RAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           R+K+ ++  + RE    E+         ++G G ++R+Y     +   D R+ +   + S
Sbjct: 305 RSKIAQMRREAREQQLVELRRGIMGGVAKMGRGDKVRTYNFGQNRCT-DHRSGMTIHNLS 363

Query: 337 DVLDG 341
           DVL+G
Sbjct: 364 DVLEG 368


>gi|329957131|ref|ZP_08297698.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
 gi|328523399|gb|EGF50498.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
          Length = 370

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 136/246 (55%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LE+  GAGG E+  +A  L RMYT++ E + +K +    ++G   G K     +
Sbjct: 112 DSRNAILEIRGGAGGDEAAIFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT
Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ +      TGVV    ++C + R Q KNK +A + LR  +
Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347

Query: 342 DLDDFM 347
           D+ D +
Sbjct: 348 DIQDCI 353


>gi|297291498|ref|XP_001095577.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 2 [Macaca mulatta]
          Length = 326

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 116/198 (58%), Gaps = 15/198 (7%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 113 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 172

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ 
Sbjct: 173 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNRE 231

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIE 331
            A   LRAKLY + L+K  E      + K +IG  GR  +IR+Y   P   V D R  I 
Sbjct: 232 LAMKKLRAKLYSMHLEK--EANKTQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHR--IS 286

Query: 332 KTSPSDVLDGDLDDFMKA 349
           KT        DL+ FM+ 
Sbjct: 287 KTL------HDLETFMQG 298


>gi|224283865|ref|ZP_03647187.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287872|ref|YP_003939130.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|311064752|ref|YP_003971477.1| peptide chain release factor 1 (RF-1) PrfA [Bifidobacterium bifidum
           PRL2010]
 gi|313141020|ref|ZP_07803213.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309251808|gb|ADO53556.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|310867071|gb|ADP36440.1| PrfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium bifidum PRL2010]
 gi|313133530|gb|EFR51147.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 362

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 151/270 (55%), Gaps = 14/270 (5%)

Query: 87  ETSDNLQRIKLEV---EYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           E +D  +R++ E+   E K   +L+  + D + D  +E+ AG GG E+  +A  LLRMY 
Sbjct: 74  EFADEAKRLEAELPAAEEKLRNALIPRDPDDARDVIMEIKAGTGGEEAALFAGDLLRMYL 133

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISP 195
           R+AEKR +       +  E  G+K   + I+      P    W  LK E GVHR+ RI  
Sbjct: 134 RYAEKRGWAVTVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPV 193

Query: 196 YDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
            +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+TH
Sbjct: 194 TESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTH 253

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIR 313
           IPTG+VV  Q E+SQ +N+A A  +L+++L  ++  Q+  E A++  S    +    +IR
Sbjct: 254 IPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSERIR 313

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +Y   P   + D RTN +  +   VLDGDL
Sbjct: 314 TYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|109502759|ref|XP_001073018.1| PREDICTED: CG5705-like [Rattus norvegicus]
 gi|149050030|gb|EDM02354.1| rCG37077, isoform CRA_b [Rattus norvegicus]
          Length = 446

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 7/194 (3%)

Query: 104 FESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
            E L+  E  D ++  LEV +G   GG   Q +   +  MY  ++  + ++ E L     
Sbjct: 172 LEHLVPKEKCDRSNVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWRFELLNYTPA 231

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217
           +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  D+
Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A 
Sbjct: 292 -VDVKVDPRDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 350

Query: 278 NMLRAKLYELELQK 291
            +LRA+LY+  ++K
Sbjct: 351 RVLRARLYQQIIEK 364


>gi|297622890|ref|YP_003704324.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
 gi|297164070|gb|ADI13781.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
          Length = 373

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 137/243 (56%), Gaps = 10/243 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ A AGG E+  +A  +  MY R+AE + FKTE L+ H     G    +  I
Sbjct: 103 DDKNVIVEIRAAAGGDEASLFAAEVFEMYRRYAEAQGFKTEVLDSHPSSVGGFSKVSFEI 162

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AY   K E GVHR+ R+   ++  R HTS  ++ V P  +D +++++S +D R+D 
Sbjct: 163 LGRGAYSKFKFESGVHRVQRVPATETQGRIHTSTVTVAVLPEAED-VDVQLSPADYRVDV 221

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +R+SG GGQ VNTTDSAVRIT+ P     +VV CQ  +SQ KNK +A  +LRA+L E E 
Sbjct: 222 FRSSGPGGQSVNTTDSAVRITYKPGTSDEIVVTCQDGKSQIKNKEKALAVLRARLLERER 281

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++    A   E+   +IG G    +IR+Y   P   + D R      + SDVL G LD+ 
Sbjct: 282 ERAAAEAR--EARLVQIGSGERSEKIRTYNF-PQSRITDHRIGYTTHNLSDVLLGKLDEL 338

Query: 347 MKA 349
            +A
Sbjct: 339 TEA 341


>gi|225350887|ref|ZP_03741910.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158343|gb|EEG71585.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 362

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/282 (37%), Positives = 155/282 (54%), Gaps = 18/282 (6%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132
           E+A E+ D +   E +  L+     VE K   +L+  + D + D  +E+ AG GG E+  
Sbjct: 67  EMASEDPDFA---EEAKRLESELPAVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQ 185
           +A  LLRMY R+AEKR +       +  E  G+K   L I+      P    W  LK E 
Sbjct: 124 FAGDLLRMYMRYAEKRGWTVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEG 183

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           GVHR+ RI   +S  R  TS + + V+P   +D  EIEI + D +ID + +SG GGQ VN
Sbjct: 184 GVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVN 243

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +
Sbjct: 244 TTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHS 301

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           ++       +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 302 QVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|82540115|ref|XP_724399.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479026|gb|EAA15964.1| Peptidyl-tRNA hydrolase domain, putative [Plasmodium yoelii yoelii]
          Length = 330

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 145/269 (53%), Gaps = 38/269 (14%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIKSATL 170
           N   L + +G GGTE+ D+ NML  MY ++      K+  K E ++I   E  GIK   +
Sbjct: 61  NSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKNIKYEVIDISKNE-IGIKKVEI 119

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--------------- 215
            + G  ++  L  E+G+HRLVR SP++S +++ TSF  + V P +               
Sbjct: 120 KVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNFLNINE 179

Query: 216 DDSIEIE------------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           +D+I ++            +++SD  I T R+ G GGQ+VN  ++AVRI H PT + V+ 
Sbjct: 180 NDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTNISVKV 239

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIRSYVLQPYQ 321
             ERSQ  NK  A  M+  KL  L++   E + N+    S+K+   +G QIR+Y+L   +
Sbjct: 240 SSERSQILNKRIALKMIYEKLLYLQI---EALKNVKYELSNKSLTHFGEQIRNYILYGNK 296

Query: 322 MVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349
           M+KD RTN+  T    +L  G++D F++A
Sbjct: 297 MIKDTRTNVFSTEIDKILSQGEIDIFVEA 325


>gi|326914097|ref|XP_003203364.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Meleagris gallopavo]
          Length = 455

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 15/261 (5%)

Query: 102 KQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           K F+ L+  E  D +   LEV AG   GG   Q +   +  MY  +A+ + +  + L   
Sbjct: 176 KLFQLLVPKEKYDKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYV 235

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215
             E  G+  A   I G + Y  LK E G HR+ RI     +SR    HT   S+ V P  
Sbjct: 236 PAEIGGLHHAAAHISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQP 295

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           ++ +++++   D RIDT+RA GAGGQHVN TDSAVRI H+PTGVVV+CQQERSQ  NK  
Sbjct: 296 EE-VDVKVDPKDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEI 354

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEK 332
           A   LRAKLY+  ++K  +++    + K ++G   Q   IR+Y       V D R + + 
Sbjct: 355 ALRTLRAKLYQQIIEK--QLSQEQSARKLQLGTRAQSERIRTYNFTQ-DRVTDHRISYDA 411

Query: 333 TSPSDVLDG--DLDDFMKATL 351
            +  ++L G  +LD  +   L
Sbjct: 412 RNIKEILSGKEELDKLINRLL 432


>gi|326478702|gb|EGE02712.1| peptide chain release factor 1 [Trichophyton equinum CBS 127.97]
          Length = 360

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 34/266 (12%)

Query: 53  DNAISFIKEIQDRLCDNLILLEL-ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESL 107
           D A   I E+Q  + +     EL +L EDD +     L   SD L+R    +    F  +
Sbjct: 64  DTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSSLSDTLKRAL--IPRHPFADM 121

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG- 164
                      +E+  GAGG E+  +A  +LRMYT +   R  +T    +E  DG  AG 
Sbjct: 122 --------PCLIEIRPGAGGDEAGLFAAKMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGA 173

Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------ 215
              +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P        
Sbjct: 174 EERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQE 233

Query: 216 -------DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
                  D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG V+  Q  RS
Sbjct: 234 DSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRS 293

Query: 269 QHKNKAQAWNMLRAKLYELELQKREE 294
           QH+N+ +AW +LRAKL +   + RE+
Sbjct: 294 QHENRRKAWLLLRAKLAQARREAREQ 319


>gi|308235424|ref|ZP_07666161.1| peptide chain release factor 1 [Gardnerella vaginalis ATCC 14018]
 gi|311114831|ref|YP_003986052.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
 gi|310946325|gb|ADP39029.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
          Length = 365

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 171/322 (53%), Gaps = 14/322 (4%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90
           +P +  N    + L R    L + +S     + +LC++  +  E+A E++D +  +E   
Sbjct: 28  EPEVASNPDAIRKLGRRHAELGSIVSAYLNYK-QLCEDYEVANEMASEDEDLA--KEAKQ 84

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
             ++I    E  +   +     D+ D  +E+ AG GG E+  +A  LLRMY R+AEKR +
Sbjct: 85  LEEQIPAAKEKLRTALIPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRH 203
            T     +  E  G+K   L I+      P    W  +K E GVHR+ RI   +S  R  
Sbjct: 145 TTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQ 204

Query: 204 TSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+THIPTG+VV 
Sbjct: 205 TSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVS 264

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            Q E+SQ +N+A A  +L+++L  ++  Q+  E A++  S    +    +IR+Y   P  
Sbjct: 265 MQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PEN 323

Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343
            + D RTN +  +   VL+GDL
Sbjct: 324 RIVDHRTNYKAYNLDQVLNGDL 345


>gi|50730809|ref|XP_417026.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 455

 Score =  142 bits (357), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 15/261 (5%)

Query: 102 KQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           K F+ L+  E  D +   LEV AG   GG   Q +   +  MY  +A+ + +  + L   
Sbjct: 176 KLFQLLVPKEKYDKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYV 235

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215
             E  G+  A   I G + Y  LK E G HR+ RI     +SR    HT   S+ V P  
Sbjct: 236 PAEIGGLHHAAAHISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQP 295

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           ++ +++++   D RIDT+RA GAGGQHVN TDSAVRI H+PTGVVV+CQQERSQ  NK  
Sbjct: 296 EE-VDVKVDPKDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEI 354

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEK 332
           A   LRAKLY+  ++K  +++    + K ++G   Q   IR+Y       V D R + + 
Sbjct: 355 ALRTLRAKLYQQIIEK--QLSQEQSARKLQLGTRAQSERIRTYNFTQ-DRVTDHRISYDA 411

Query: 333 TSPSDVLDG--DLDDFMKATL 351
            +  ++L G  +LD  +   L
Sbjct: 412 RNIKEILSGKEELDKLINRLL 432


>gi|39961534|ref|XP_364694.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
 gi|145011042|gb|EDJ95698.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
          Length = 425

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 127/222 (57%), Gaps = 25/222 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE-----EAGIKSATLL 171
           +E   G GG E + + + L +MY  +   + ++T+ +  E  DG      E  ++ A L 
Sbjct: 133 IEFRPGPGGMEGRLFTDALFKMYQSYCTFKGYRTKTVTYERVDGPPGADGETPLQEAILE 192

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP---------------VVD 216
           +  P +Y   +GE G+HR+ R+   + + R HTS +++WV P               V D
Sbjct: 193 VINPGSYDIFRGEAGMHRVQRVPATEKSGRIHTSAAAVWVLPSFPEEAGASDEGTTDVND 252

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            + +  I  ++ R++T RA GAGGQHVN T+SA+R+TH+PTG +V  Q ERSQ +N+  A
Sbjct: 253 PNSDFYIDPTEVRVETMRARGAGGQHVNKTESAIRLTHMPTGTMVSMQDERSQQRNREAA 312

Query: 277 WNMLRAKLYELELQKREEIA-NIGES--SKTEIGWGRQIRSY 315
           W +LR+++ +   ++REE+A N+  S  SK +I  G +IR+Y
Sbjct: 313 WKVLRSRIAQKRREQREEMAQNLRSSVLSKDKITRGEKIRTY 354


>gi|167948499|ref|ZP_02535573.1| hypothetical protein Epers_18991 [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589280|gb|ABG77149.1| hypothetical protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 153

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 81/106 (76%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +F  + SGE D ++A+L++ AG+GGTE+QDWA MLLRMY RW E   FKTE +E   GE 
Sbjct: 10  EFRRMFSGEMDPSNAFLDIQAGSGGTEAQDWAEMLLRMYLRWGEAHGFKTELMEASPGEV 69

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+
Sbjct: 70  AGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSA 115


>gi|295657325|ref|XP_002789232.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
 gi|226284000|gb|EEH39566.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
          Length = 438

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 121/227 (53%), Gaps = 35/227 (15%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171
           LE+  GAGG E+  +AN LLRMYT +   R  +   L+          G E  +  A + 
Sbjct: 150 LELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVME 209

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------DDSIEIEIS 224
           I+ P +Y  L+ E GVHR+ R+   +S  R HTS  S+ + P         D  +  +  
Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDP 269

Query: 225 ESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            SD  ID         RASGAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW
Sbjct: 270 NSDFYIDPREVNVEKMRASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329

Query: 278 NMLRAKLYELELQKREE---------IANIGESSKTEIGWGRQIRSY 315
            +LRA++ +   + REE         +  +G     ++G G +IR+Y
Sbjct: 330 QLLRARIAQQRREAREEEMVKLRRGAMGGVG-----KMGRGDKIRTY 371


>gi|119025459|ref|YP_909304.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486885|ref|ZP_02028292.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
 gi|229470348|sp|A1A0I9|RF1_BIFAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118765043|dbj|BAF39222.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084748|gb|EDN83793.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
          Length = 362

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 135/240 (56%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMY R+AEKR +       +  E  G+K   L I
Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGWSVTVQSENTTELGGVKDVQLAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  LK E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 164 RAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+THIPTG+ V  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGITVNMQDEKSQIQNRAAALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|225861003|ref|YP_002742512.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230460|ref|ZP_06964141.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255330|ref|ZP_06978916.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502960|ref|YP_003724900.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254790904|sp|C1CRE0|RF1_STRZT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225726985|gb|ACO22836.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238555|gb|ADI69686.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389396|gb|EGE87741.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04375]
 gi|332201491|gb|EGJ15561.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47368]
          Length = 359

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 133/242 (54%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V   V++ +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMLEVEE-VEYDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|167765221|ref|ZP_02437334.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
 gi|167696849|gb|EDS13428.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
          Length = 370

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 136/246 (55%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LE+  GAGG E+  +A  L RMYT++ E + ++ +    ++G   G K     +
Sbjct: 112 DSRNAILEIRGGAGGDEAAIFAGDLFRMYTKYCEAKGWRLDISSANEGAAGGFKEIICSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT
Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ +      TGVV    ++C + R Q KNK +A + LR  +
Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347

Query: 342 DLDDFM 347
           D+ D +
Sbjct: 348 DIQDCI 353


>gi|23335569|ref|ZP_00120804.1| COG0216: Protein chain release factor A [Bifidobacterium longum
           DJO10A]
 gi|189440751|ref|YP_001955832.1| peptide chain release factor 1 [Bifidobacterium longum DJO10A]
 gi|238692046|sp|B3DR51|RF1_BIFLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189429186|gb|ACD99334.1| Protein chain release factor A [Bifidobacterium longum DJO10A]
          Length = 362

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMYTR+AEKR +       +  E  G+K   + I
Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|296454711|ref|YP_003661854.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184142|gb|ADH01024.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 362

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMYTR+AEKR +       +  E  G+K   + I
Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|329965246|ref|ZP_08302176.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
 gi|328523266|gb|EGF50366.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
          Length = 370

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 172/342 (50%), Gaps = 21/342 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   ++T   DP +  +      L +E + L + ++  KE    L       E+   E
Sbjct: 15  VARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQILSGIEEAKEIMANE 74

Query: 80  DDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            D  +    +E  D  Q  + E+E +Q + LL  +   DS +A LE+  G GG E+  +A
Sbjct: 75  TDPEMREMAREELDTCQSRQPELE-EQIKLLLVPADPQDSRNAILEIRGGTGGDEAAIFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + ++ E    ++G   G K     I G   YG +K E GVHR+ R+ 
Sbjct: 134 GDLFRMYTKYCETKGWRMEISSANEGSAGGFKEIVCSITGDGVYGTMKYESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR+ +
Sbjct: 194 ATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRLRY 252

Query: 255 ----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
                 TGVV    ++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT +
Sbjct: 253 NWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMV 310

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
             G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 311 STGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351


>gi|146161938|ref|XP_001008252.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila]
 gi|146146594|gb|EAR88007.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 452

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 153/276 (55%), Gaps = 17/276 (6%)

Query: 83  SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           ++++E  +N +++  E++ +  E LL      D ++  LEV  GAGG+ES  +A  + +M
Sbjct: 155 ALIEEEMENSKQLIDELQDECLEQLLPKGKHDDCSEITLEVRGGAGGSESSLFAEEVFKM 214

Query: 141 YTRWAEKR--KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           Y  +  ++  +F  ++ ++      G K   L + G N Y  +  E GVH+++R+   +S
Sbjct: 215 YQAFFAQQGYQFSIDSFQVDMAINKGCKLGVLKVSGTNIYKKMMNESGVHKVIRVPETES 274

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R H+S  +I V  +    ++ ++ E D + +  R+ GAGGQHVN  +SA R+TH+PTG
Sbjct: 275 KGRLHSS--TISVVVMPVVPMDFKVDEKDLKFEFMRSQGAGGQHVNKVESACRVTHLPTG 332

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + V CQ +R Q +NK +A  +L  KL+++E++K  +     +  K++IG G    +IR+Y
Sbjct: 333 ISVLCQDDRQQERNKQRALKLLTEKLFQVEVEKSNQ--QQSDQRKSQIGGGDRSDKIRTY 390

Query: 316 VLQPYQMVKDLRTN-----IEKTSPSDVLDGDLDDF 346
              P   + D RTN     IEK    + L+  +D++
Sbjct: 391 NF-PQGRITDHRTNLTLFGIEKMMKGEFLEEFIDEY 425


>gi|213691478|ref|YP_002322064.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254790863|sp|B7GP74|RF1_BIFLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|213522939|gb|ACJ51686.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457551|dbj|BAJ68172.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 362

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMYTR+AEKR +       +  E  G+K   + I
Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|23466257|ref|NP_696860.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227546609|ref|ZP_03976658.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239621640|ref|ZP_04664671.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312134004|ref|YP_004001343.1| prfa [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482079|ref|ZP_07941103.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689793|ref|YP_004209527.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691739|ref|YP_004221309.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|81753501|sp|Q8G3P5|RF1_BIFLO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23327005|gb|AAN25496.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227212926|gb|EEI80805.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239515515|gb|EEQ55382.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291516325|emb|CBK69941.1| bacterial peptide chain release factor 1 (bRF-1) [Bifidobacterium
           longum subsp. longum F8]
 gi|311773307|gb|ADQ02795.1| PrfA [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916438|gb|EFV37836.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456595|dbj|BAJ67217.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320461129|dbj|BAJ71749.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 362

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMYTR+AEKR +       +  E  G+K   + I
Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|255534225|ref|YP_003094596.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
 gi|255340421|gb|ACU06534.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
          Length = 361

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 136/247 (55%), Gaps = 16/247 (6%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LEIHDGEEA--GIKS 167
           AD  +  +E+ AG GG E+  +   + R Y  +     FKT+    EI D  EA  G K 
Sbjct: 109 ADDKNVIVELRAGTGGDEAAIFVEDVYRAYAMF-----FKTKGWKHEITDANEASKGYKE 163

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             L ++G   YG +K E GVHR+ R+   +S  R HTS  ++ V P  ++ ++ E++ +D
Sbjct: 164 LILKVEGEGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDFELNPAD 222

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
             + T R+ GAGGQ+VN  ++ V++TH P+G+VV CQQ RSQ  N+  A  MLR KLY++
Sbjct: 223 IEMQTSRSGGAGGQNVNKVETKVQLTHKPSGMVVVCQQARSQLANRELAMEMLRTKLYDI 282

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ELQ+ +   +I    KT +  G    +I++Y   P   V D R N    +    ++GD+ 
Sbjct: 283 ELQRVQ--GDIAAQRKTMVSTGDRSAKIKTYNY-PQGRVTDHRVNKSVYNLDAYMNGDIQ 339

Query: 345 DFMKATL 351
           + + A +
Sbjct: 340 EMIDAVI 346


>gi|198276935|ref|ZP_03209466.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
 gi|198270460|gb|EDY94730.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
          Length = 369

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 171/343 (49%), Gaps = 20/343 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   ++T   DP++  +      L +E + L + ++  KE   +  + L   ++ + E
Sbjct: 15  VSRFEEVSTLITDPNVIADQKRYVKLTKEYKELGDLMAARKEYL-QCINGLEEAKMMMSE 73

Query: 80  DDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +D  +     +E +    RI    E  +   + +   D  +A LE+  G GG E+  +A 
Sbjct: 74  NDPEMKEMAREEAASCEARIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAIFAG 133

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ R+  
Sbjct: 134 DLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGEKVYGTLKYESGVHRVQRVPA 193

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--- 252
            ++  R HTS +S+ V P   +  ++EI+E + + DT+R+ GAGGQ+VN  +S VR+   
Sbjct: 194 TETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVRLRYN 252

Query: 253 -----THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
                T I   ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT + 
Sbjct: 253 WKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMVS 310

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            G    +IR+Y   P   + D R N    + +  +DGD+ D +
Sbjct: 311 TGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCI 352


>gi|332299913|ref|YP_004441834.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176976|gb|AEE12666.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 368

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 132/251 (52%), Gaps = 17/251 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+ AG GG E+  +A  L RMY+R+ E + +        +G   G K   L +
Sbjct: 110 DDKNAILELRAGTGGDEAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNV 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ I+E + + DT
Sbjct: 170 TGTGVYGTLKYESGVHRVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TGVV----VQCQQERSQHKNKAQAWNMLRAK 283
           +R+SGAGGQ+VN  +S VR+ H P     TGVV    ++C + R Q KNK +A + LR  
Sbjct: 229 FRSSGAGGQNVNKVESGVRL-HYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTF 287

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +Y+ E QK   I  I    KT +  G    +IR+Y   P   V D R  +   +   VL 
Sbjct: 288 IYDKEHQKY--IDEIASRRKTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLG 344

Query: 341 GDLDDFMKATL 351
           GDL   + A +
Sbjct: 345 GDLQPIIDALI 355


>gi|313886402|ref|ZP_07820124.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924148|gb|EFR34935.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 368

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 132/251 (52%), Gaps = 17/251 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+ AG GG E+  +A  L RMY+R+ E + +        +G   G K   L +
Sbjct: 110 DDKNAILELRAGTGGDEAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNV 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ I+E + + DT
Sbjct: 170 TGTGVYGTLKYESGVHRVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TGVV----VQCQQERSQHKNKAQAWNMLRAK 283
           +R+SGAGGQ+VN  +S VR+ H P     TGVV    ++C + R Q KNK +A + LR  
Sbjct: 229 FRSSGAGGQNVNKVESGVRL-HYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTF 287

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +Y+ E QK   I  I    KT +  G    +IR+Y   P   V D R  +   +   VL 
Sbjct: 288 IYDKEHQKY--IDEIASRRKTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLG 344

Query: 341 GDLDDFMKATL 351
           GDL   + A +
Sbjct: 345 GDLQPIIDALI 355


>gi|317033212|ref|XP_001395081.2| peptide chain release factor 1 [Aspergillus niger CBS 513.88]
          Length = 429

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 147/293 (50%), Gaps = 34/293 (11%)

Query: 72  LLELALEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  LA+E+ + S   L   +DNL+  K  +    F  L           LE+  GAGG E
Sbjct: 109 LRSLAVEDLESSKIALPAIADNLK--KALIPRHPFADL--------PCLLEIRPGAGGDE 158

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186
           +  +A  +LRMY  +  +R F+   +  ++ DG  +  +  A L +    AY  L+ E G
Sbjct: 159 AGLFAFEVLRMYIAFCSRRGFRYSIIKQDVADGPAQDRLSEAVLEVDADGAYDILRTESG 218

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD-------CRIDT 232
           VHR+ R+   ++  R HTS  S+ + P        +D S+  E   SD        R + 
Sbjct: 219 VHRVQRVPATEAKGRTHTSAVSVMILPSFPDSGSGLDSSLNFEDPNSDYYVDPQEVRTEK 278

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA GAGGQHVN T+SA+R+THIPTG VV  Q  RSQH N+ +AW +LRA+L E   + R
Sbjct: 279 MRAGGAGGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRARLAEARREAR 338

Query: 293 E-EIANIGESSK---TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           E E+ N+   +      +G G +IR+Y         D R+ +   +   VLDG
Sbjct: 339 EQELVNLRRGAMGGVARMGRGDKIRTYNYG-QNRCTDHRSGLTIHNLDSVLDG 390


>gi|228470795|ref|ZP_04055643.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
 gi|228307468|gb|EEK16473.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
          Length = 368

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 132/251 (52%), Gaps = 17/251 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+ AG GG E+  +A  L RMY+R+ E + +        +G   G K   L +
Sbjct: 110 DDKNAILELRAGTGGDEAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNV 169

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ I+E + + DT
Sbjct: 170 TGTGVYGTLKYESGVHRVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDT 228

Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TGVV----VQCQQERSQHKNKAQAWNMLRAK 283
           +R+SGAGGQ+VN  +S VR+ H P     TGVV    ++C + R Q KNK +A + LR  
Sbjct: 229 FRSSGAGGQNVNKVESGVRL-HYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTF 287

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +Y+ E QK   I  I    KT +  G    +IR+Y   P   V D R  +   +   VL 
Sbjct: 288 IYDKEHQKY--IDEIASRRKTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLG 344

Query: 341 GDLDDFMKATL 351
           GDL   + A +
Sbjct: 345 GDLQPIIDALI 355


>gi|225559538|gb|EEH07820.1| peptide chain release factor 1 [Ajellomyces capsulatus G186AR]
          Length = 438

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 29/224 (12%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171
           LE+  GAGG E+  +AN LLRMYT +   R  +T  L+        + G E  +  A + 
Sbjct: 150 LELRPGAGGEEAGIFANELLRMYTMFCSNRSLRTTLLKKECENAGANGGSEDRLIEAVME 209

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDC 228
           I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P    +I   + E++  D 
Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPTTENKGRTHTSAVSVVILPSFSSNIGEGDSELNFDDP 269

Query: 229 RIDTY-----------RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
             D Y           RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW
Sbjct: 270 NSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329

Query: 278 NMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSY 315
           ++LRA++ +   + REE         +G  +K  +G G +IR+Y
Sbjct: 330 HLLRARIAQQRREAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 371


>gi|160891026|ref|ZP_02072029.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270294364|ref|ZP_06200566.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|317480970|ref|ZP_07940050.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
 gi|156859247|gb|EDO52678.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270275831|gb|EFA21691.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|316902863|gb|EFV24737.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
          Length = 370

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 171/342 (50%), Gaps = 21/342 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   ++T   DP +  +      L +E + L + ++  KE    L       E+   E
Sbjct: 15  VARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLGGIEEAKEIIANE 74

Query: 80  DDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            D  +    +E  D  Q  + E+E +Q + LL  +   D  +A LE+  G GG E+  +A
Sbjct: 75  TDQEMREMAREELDACQTRQPELE-EQIKLLLVPADPQDGRNAILEIRGGTGGDEAAIFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + ++ E    ++G   G K     + G N YG LK E GVHR+ R+ 
Sbjct: 134 GDLFRMYTKYCESKGWRMEISSANEGAAGGFKEIVCSVTGDNVYGTLKYESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-- 252
             ++  R HTS +S+ V P  ++  ++ I+E + + DT+R+ GAGGQ+VN  +S VR+  
Sbjct: 194 ATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRLRY 252

Query: 253 ------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
                 T I   ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT +
Sbjct: 253 NWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMV 310

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
             G    +IR+Y   P   + D R N    + +  +DGD+ D
Sbjct: 311 STGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351


>gi|291457338|ref|ZP_06596728.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
 gi|291381173|gb|EFE88691.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
          Length = 362

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ D  +E+ AG GG E+  +A  LLRMYTR+AEKR +       +  E  G+K   + I
Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNIQSENTTELGGVKDVQIAI 163

Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           +      P    W  +K E GVHR+ RI   +S  R  TS + + V+P   +D  EIEI 
Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V  Q E+SQ +N+A A  +L+++L
Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRASALRVLKSRL 283

Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             ++  Q+  E A++  S    +    +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342


>gi|325300471|ref|YP_004260388.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
 gi|324320024|gb|ADY37915.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
          Length = 370

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 133/246 (54%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+  G GG E+  +A  L RMY+++ E++ +K E     +G   G K     +
Sbjct: 112 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCERKGWKLEVSSASEGASGGFKEIICSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +S+ V P   +  ++EI+E + + DT
Sbjct: 172 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284
           +R+SGAGGQ+VN  +S VR+ +      TGVV    ++C + R Q KNK +A   LR  +
Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALARLRTFI 290

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347

Query: 342 DLDDFM 347
           D+ D +
Sbjct: 348 DIQDCI 353


>gi|307176123|gb|EFN65821.1| Peptide chain release factor 1-like, mitochondrial [Camponotus
           floridanus]
          Length = 412

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 136/243 (55%), Gaps = 21/243 (8%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AG GG E+  +   L  MY  +A+      E +++   +  GI+  ++L+ G   Y
Sbjct: 158 IEITAGVGGQEAMLFVKDLYEMYMGYAKYLDLTHEVIDMETNDNNGIRHVSILLSGDETY 217

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L+ E GVHR+ RI   + + R HTS +S+ + P     ++I I++ D +I+T RASGA
Sbjct: 218 K-LQYEGGVHRVQRIPATERSGRVHTSTASVAILPT-PSKVQIVINDKDLKIETKRASGA 275

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRI ++P+G+ V CQ  RSQ KNK  A   LR+ LYE +L K+     I
Sbjct: 276 GGQHVNTTDSAVRIIYLPSGLSVSCQMHRSQIKNKEVAMIKLRSILYEQQLNKQTTF--I 333

Query: 299 GESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG---DLDDFMKATLA 352
            E  + ++G      ++R+Y             N ++ +   + +G   +L +FM+  +A
Sbjct: 334 SELRQKQMGMKSRNEKVRTY-----------NYNQDRVTDHRLQNGTMYNLPEFMQGGVA 382

Query: 353 IKK 355
           ++K
Sbjct: 383 LEK 385


>gi|134079787|emb|CAK40922.1| unnamed protein product [Aspergillus niger]
          Length = 462

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 21/218 (9%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE-EAGIKSATLLIKGP 175
           LE+  GAGG E+  +A  +LRMY  +  +R F+   +  ++ DG  +  +  A L +   
Sbjct: 181 LEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQDVADGPAQDRLSEAVLEVDAD 240

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD- 227
            AY  L+ E GVHR+ R+   ++  R HTS  S+ + P        +D S+  E   SD 
Sbjct: 241 GAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSFPDSGSGLDSSLNFEDPNSDY 300

Query: 228 ------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
                  R +  RA GAGGQHVN T+SA+R+THIPTG VV  Q  RSQH N+ +AW +LR
Sbjct: 301 YVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLR 360

Query: 282 AKLYELELQKRE-EIANIGESSK---TEIGWGRQIRSY 315
           A+L E   + RE E+ N+   +      +G G +IR+Y
Sbjct: 361 ARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTY 398


>gi|325856854|ref|ZP_08172352.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|327314543|ref|YP_004329980.1| peptide chain release factor 1 [Prevotella denticola F0289]
 gi|325483227|gb|EGC86204.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|326945459|gb|AEA21344.1| peptide chain release factor 1 [Prevotella denticola F0289]
          Length = 370

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 161/318 (50%), Gaps = 25/318 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+   N ++ IKE +D + +  +  + E+A EE     L E  +   +I+ E+   
Sbjct: 50  IMDARRRYVNCLTTIKEAKDIIANESDAEMKEMAREE-----LSENEELQPKIEEEI--- 101

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   +     D  +  +E+  GAGG E+  +A  L  MY R+ +K+ +K     + +G  
Sbjct: 102 KLLLVPKDPEDGKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAV 161

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     ++G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 162 GGFKEIDFAVEGENVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK 
Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A + L   +Y+ E QK   I +I    KT +  G    +IR+Y   P   V D R    
Sbjct: 281 RALSRLYTYIYDHEHQKY--IDDIASRRKTLVSTGDRSAKIRTYNF-PQGRVTDHRIGFT 337

Query: 332 KTSPSDVLDGDLDDFMKA 349
                  ++GD+ + + A
Sbjct: 338 THDLQGFMNGDIQEMIDA 355


>gi|327357433|gb|EGE86290.1| peptide chain release factor 1 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 438

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 160/321 (49%), Gaps = 48/321 (14%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---LLELALEEDDCSIL 85
           +T DP   +   E     R  +  ++A   I E+ + L D      L  LALE+     L
Sbjct: 65  ETFDPKTAKRAGELATTARALKKWEDANETIAELNNLLKDPSTDSELHSLALED-----L 119

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           Q T+ +L  +   ++    ++L+     ++    LE+  GAGG E+  +AN LLRMYT +
Sbjct: 120 QSTTTSLAILSTNLK----QALIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMF 175

Query: 145 AEKR-------KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
              R       K ++E      G E  +  A + I+ P +Y  L+ E GVHR+ R+   +
Sbjct: 176 CSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVHRVQRVPATE 235

Query: 198 SNSRRHTSFSSIWVYPVV-------DDSIEIEISESDCRIDT-------YRASGAGGQHV 243
           S  R HTS  S+ + P         D  +  +   SD  ID         RA GAGGQHV
Sbjct: 236 SKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHV 295

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--------- 294
           N T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   + REE         
Sbjct: 296 NKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGA 355

Query: 295 IANIGESSKTEIGWGRQIRSY 315
           +  +G     ++G G +IR+Y
Sbjct: 356 MGGVG-----KMGRGDKIRTY 371


>gi|156094764|ref|XP_001613418.1| peptide chain release factor [Plasmodium vivax SaI-1]
 gi|148802292|gb|EDL43691.1| peptide chain release factor, putative [Plasmodium vivax]
          Length = 334

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 141/273 (51%), Gaps = 44/273 (16%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK----FKTEALEIHDGEEAGIKSATL 170
           N   L + +G GGTE+ D+ +ML  MY ++  K K     K E +++   E  GIK   +
Sbjct: 63  NSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVIDLSKNE-VGIKKVEI 121

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDSI-------- 219
            I G  ++     E+G+HR+VR SP+++ +++ TSF  + V P +   D ++        
Sbjct: 122 KIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINFLNIAE 181

Query: 220 ------------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                             EI +++SD  I T R+ G GGQ+VN  ++AVRI H PT + V
Sbjct: 182 SSSPSVKKNMNSRNINVNEIALNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISV 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVL 317
           +   ERSQ  NK  A   +  KL  L+L+    K+ E +N     K+   +G QIR+Y+L
Sbjct: 242 KVSSERSQILNKRIALKTIYEKLLYLQLEALKNKKYEFSN-----KSLTHFGEQIRNYIL 296

Query: 318 QPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349
              +M+KD RTN+  T    VL  G+++ F+ A
Sbjct: 297 YGNKMIKDTRTNVSSTDVDRVLSQGEIELFVDA 329


>gi|189461883|ref|ZP_03010668.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
 gi|189431477|gb|EDV00462.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
          Length = 369

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 15/244 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+  G GG E+  +A  L RMY+++ E + +K E    ++G   G K     +
Sbjct: 111 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +S+ V P   +  ++EI+E + + DT
Sbjct: 171 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ +      TGVV    ++C + R Q KNK +A + LR  +
Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 289

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 290 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 346

Query: 342 DLDD 345
           D+ D
Sbjct: 347 DIQD 350


>gi|68072219|ref|XP_678023.1| peptide chain release factor [Plasmodium berghei strain ANKA]
 gi|56498354|emb|CAH99275.1| peptide chain release factor, putative [Plasmodium berghei]
          Length = 329

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 145/269 (53%), Gaps = 39/269 (14%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIKSATL 170
           N   L + +G GGTE+ D+ NML  MY ++      K+  K E ++I   E  GIK   +
Sbjct: 61  NSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKYIKYEVIDISKNE-IGIKKVEI 119

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--------------- 215
            + G  ++  L  E+G+HRLVR SP++S +++ TSF  + V P +               
Sbjct: 120 KVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNFLNINE 179

Query: 216 DDSIEIE------------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           +D+I ++            +++SD  I T R+ G GGQ+VN  ++AVRI H PT + V+ 
Sbjct: 180 NDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTNISVKV 239

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIRSYVLQPYQ 321
             ERSQ  NK  A  M+   LY L++   E + N+    S+K+   +G QIR+Y+L   +
Sbjct: 240 SSERSQILNKRIALKMIEKLLY-LQI---EALKNVKYELSNKSLTHFGEQIRNYILYGNK 295

Query: 322 MVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349
           M+KD RTN+  T    +L  G++D F++A
Sbjct: 296 MIKDTRTNVFSTEIDKILSQGEIDIFVEA 324


>gi|261188569|ref|XP_002620699.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239593183|gb|EEQ75764.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239613247|gb|EEQ90234.1| peptide chain release factor 1 [Ajellomyces dermatitidis ER-3]
          Length = 438

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 160/321 (49%), Gaps = 48/321 (14%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---LLELALEEDDCSIL 85
           +T DP   +   E     R  +  ++A   I E+ + L D      L  LALE+     L
Sbjct: 65  ETFDPKTAKRAGELATTARALKKWEDANETIAELNNLLKDPSTDSELHSLALED-----L 119

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           Q T+ +L  +   ++    ++L+     ++    LE+  GAGG E+  +AN LLRMYT +
Sbjct: 120 QSTTTSLAILSTNLK----QALIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMF 175

Query: 145 AEKR-------KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
              R       K ++E      G E  +  A + I+ P +Y  L+ E GVHR+ R+   +
Sbjct: 176 CSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVHRVQRVPATE 235

Query: 198 SNSRRHTSFSSIWVYPVV-------DDSIEIEISESDCRIDT-------YRASGAGGQHV 243
           S  R HTS  S+ + P         D  +  +   SD  ID         RA GAGGQHV
Sbjct: 236 SKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHV 295

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--------- 294
           N T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   + REE         
Sbjct: 296 NKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGA 355

Query: 295 IANIGESSKTEIGWGRQIRSY 315
           +  +G     ++G G +IR+Y
Sbjct: 356 MGGVG-----KMGRGDKIRTY 371


>gi|224026398|ref|ZP_03644764.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
 gi|224019634|gb|EEF77632.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
          Length = 369

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 15/244 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+  G GG E+  +A  L RMY+++ E + +K E    ++G   G K     +
Sbjct: 111 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCESKGWKLEVSNANEGAAGGFKEIICSV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +S+ V P   +  ++EI+E + + DT
Sbjct: 171 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ +      TGVV    ++C + R Q KNK +A + LR  +
Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 289

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 290 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 346

Query: 342 DLDD 345
           D+ D
Sbjct: 347 DIQD 350


>gi|19113899|ref|NP_592987.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1172908|sp|Q09691|RF1M_SCHPO RecName: Full=Putative peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|1052800|emb|CAA90504.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe]
          Length = 396

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 166/319 (52%), Gaps = 20/319 (6%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEV 99
           AK + R R+ + NA S  K + +++ D   L ++  +E D  +       +  I  K+  
Sbjct: 69  AKRIARLRR-VHNAYSKFKSLSEQISD---LKQMEAQESDAEVKMMAVTEINEISNKIPK 124

Query: 100 EYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR----KFKTE 153
             +  E+ L  +ADS    A +E+  G GGTE+  +AN L+ MY ++A  +    KF ++
Sbjct: 125 SIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFISK 184

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
           +     G EA I  A   I+G  AYG L  E GVHR+ R    ++  R HTS +S+ V P
Sbjct: 185 SAV--QGLEA-ITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLP 241

Query: 214 -VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
            V +D        S+ +I+  R+ GAGGQHVN T+SAVR+THIPTG+ V  Q  RSQH+N
Sbjct: 242 QVSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQN 301

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           K +A+ +L ++L  L   K  E   +   ++ T      ++R+Y     + V D R  + 
Sbjct: 302 KEKAFLVLNSRLAALNAAKENEAERLKRKNQVTSSDRSEKLRTYNFNQNR-VTDHRIGLS 360

Query: 332 KTSPSDVLDGD--LDDFMK 348
               S  + G+   D+F++
Sbjct: 361 MHDLSTFMQGEEKFDEFLE 379


>gi|325269739|ref|ZP_08136350.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
 gi|324987940|gb|EGC19912.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
          Length = 370

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 163/318 (51%), Gaps = 25/318 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+   N ++ IKE +D + +  +  + E+A EE     L E ++ LQ  K+E E K
Sbjct: 50  IMDARRRYVNCLTTIKEAKDIIANESDAEMKEMAREE-----LSE-NEGLQP-KIEEEIK 102

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                   E D  +  +E+  GAGG E+  +A  L  MY R+ +K+ +K     + +G  
Sbjct: 103 LLLVPKDPE-DGKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAV 161

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     ++G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 162 GGFKEIDFAVEGENVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK 
Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A + L   +Y+ E QK   I +I    KT +  G    +IR+Y   P   V D R    
Sbjct: 281 RALSRLYTYIYDHEHQKY--IDDIASRRKTLVSTGDRSAKIRTYNF-PQGRVTDHRIGFT 337

Query: 332 KTSPSDVLDGDLDDFMKA 349
                  ++GD+ + + A
Sbjct: 338 THDLQGFMNGDIQEMIDA 355


>gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor
           [Cryptococcus gattii WM276]
 gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 476

 Score =  139 bits (350), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 96/250 (38%), Positives = 135/250 (54%), Gaps = 19/250 (7%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE----IHDGEEAGIKSAT 169
           S  A + ++AG GG ES      L RMY R+A  R +K E +            GI+  T
Sbjct: 206 SLPAVMSLNAGVGGLESALCTEDLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELT 265

Query: 170 LLIKGPN-------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           +  + P         YG L+ E+GVHR+ R+   ++  R HTS  ++ V P+  D+ E  
Sbjct: 266 VKFEPPQYAEEGTEVYGALQWEKGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAP 325

Query: 223 -ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            +   D RID  RA GAGGQHVN T+SAVR+THIPTG+ V  Q  RSQH+N+A AW +LR
Sbjct: 326 LVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNRAWAWEILR 385

Query: 282 AKLYELELQKREEIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A+L   E +  EE+     S + ++ G  R  +IR+Y     ++  D R  I  T    V
Sbjct: 386 ARLS--EKKHNEEVEARRASRRDQVKGADRSDKIRTYNFNQDRLT-DHRFGITVTGLQRV 442

Query: 339 LDGD-LDDFM 347
           LDG+ L+D +
Sbjct: 443 LDGEGLEDVI 452


>gi|194398144|ref|YP_002037655.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
 gi|238690818|sp|B5E4D9|RF1_STRP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194357811|gb|ACF56259.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
          Length = 359

 Score =  139 bits (350), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 11/242 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       G K    ++
Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS +++ V P V+  +E +I   D R+D 
Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE-EVEXDIDPKDLRVDI 227

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ IG G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342

Query: 348 KA 349
            A
Sbjct: 343 DA 344


>gi|296422823|ref|XP_002840958.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637185|emb|CAZ85149.1| unnamed protein product [Tuber melanosporum]
          Length = 309

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 19/215 (8%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHDGEEAG--IKSATLLIK 173
           A +E+  G GG+E+  +A  LL++YT + A  R +    + +  G E G  ++ A   ++
Sbjct: 48  ALVEIRPGTGGSEASLFAGDLLKLYTMYCANIRNWPLSMVSLTAGAEGGDGVQEAIFEVE 107

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES------- 226
              AY   +GE GVHR+ R+   +   R HTS  ++ V P      E+++ E        
Sbjct: 108 ASGAYEIFRGEAGVHRVQRVPATEKQGRTHTSTVNVVVLPSFP---EVQLGEGEEDPDSI 164

Query: 227 ----DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
               D R+D  RA GAGGQHVNTTDSAVR+THIPTG+V   Q  RSQHKN+A+A  +L++
Sbjct: 165 IDMKDVRVDVMRARGAGGQHVNTTDSAVRMTHIPTGIVAAIQDSRSQHKNRAKAMVVLKS 224

Query: 283 KLYELELQKR--EEIANIGESSKTEIGWGRQIRSY 315
           ++ E    +R  EE+A     +K   G   ++R+Y
Sbjct: 225 RIAEKRRAEREAEELALRRSVAKVNAGRSDKMRTY 259


>gi|298711208|emb|CBJ32429.1| peptide chain release factor 1 [Ectocarpus siliculosus]
          Length = 448

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 138/244 (56%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+ AG GG E+  WA  LL +Y ++A ++ +  + +E    E  G ++    +
Sbjct: 185 DDRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEV 244

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   Y  LK E GVHR+ R+   ++  R HTS +++ + P VD+ + + I   D  I T
Sbjct: 245 NGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDE-VAVNIRPEDIEIKT 303

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ G+GGQ+VN  +SAV + H PTG+ + C QERSQ KN+  A  +LR+++Y++EL+K+
Sbjct: 304 ARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQ 363

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN---IEKTSP-SDVLDGD-LDDFM 347
           +  A    + K ++G G   RS  ++ Y   KD R +   I K  P ++ L G  LDD +
Sbjct: 364 Q--AETSGNRKAQVGSGS--RSEKIRTYNW-KDSRCSDHRIGKNFPLNNFLSGSGLDDMI 418

Query: 348 KATL 351
            A +
Sbjct: 419 GACI 422


>gi|212690981|ref|ZP_03299109.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|237712531|ref|ZP_04543012.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|237726705|ref|ZP_04557186.1| peptide chain release factor 1 [Bacteroides sp. D4]
 gi|265752224|ref|ZP_06088017.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
 gi|212666213|gb|EEB26785.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|229435231|gb|EEO45308.1| peptide chain release factor 1 [Bacteroides dorei 5_1_36/D4]
 gi|229453852|gb|EEO59573.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|263237016|gb|EEZ22486.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 132/246 (53%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+  G GG E+  +A  L RMY+++ E + +K E    ++G   G K     +
Sbjct: 113 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCETKGWKLEVSSANEGAAGGFKEIICSV 172

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +S+ V P   +  ++EI+E + + DT
Sbjct: 173 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 231

Query: 233 YRASGAGGQHVNTTDSAVRI--------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+        T I   ++++C + R Q KNK +A + LR  +
Sbjct: 232 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFI 291

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 292 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 348

Query: 342 DLDDFM 347
           D+ D +
Sbjct: 349 DIQDCI 354


>gi|325089543|gb|EGC42853.1| peptide chain release factor 1 [Ajellomyces capsulatus H88]
          Length = 438

 Score =  139 bits (349), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 29/224 (12%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171
           LE+  GAGG E+  +AN LLRMYT +   R  +   L+        + G E  +  A + 
Sbjct: 150 LELRPGAGGEEAGIFANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVME 209

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------DDSIEIEIS 224
           I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P         D  +  +  
Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDP 269

Query: 225 ESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            SD  ID         RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW
Sbjct: 270 NSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329

Query: 278 NMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSY 315
           ++LRA++ +   + REE         +G  +K  +G G +IR+Y
Sbjct: 330 HLLRARIAQQRREAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 371


>gi|221051906|ref|XP_002257529.1| peptidyl-trna hydrolase [Plasmodium knowlesi strain H]
 gi|193807359|emb|CAQ37864.1| peptidyl-trna hydrolase, putative [Plasmodium knowlesi strain H]
          Length = 334

 Score =  139 bits (349), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 141/273 (51%), Gaps = 44/273 (16%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK----FKTEALEIHDGEEAGIKSATL 170
           N   L + +G GGTE+ D+ +ML  MY ++  K K     K E +++   E  GIK   +
Sbjct: 63  NSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVMDLSKNE-VGIKKVEI 121

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDSI-------- 219
            I G  ++     E+G+HR+VR SP+++ +++ TSF  + V P +   D ++        
Sbjct: 122 KIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINFLNIAE 181

Query: 220 ------------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                             EI +++SD  I T R+ G GGQ+VN  ++AVRI H PT + V
Sbjct: 182 SSSTPVKKTLNSRNINVNEIPLNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISV 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVL 317
           +   ERSQ  NK  A   +  KL  L+L+    K+ E +N     K+   +G QIR+Y+L
Sbjct: 242 KVSSERSQILNKRIALKTIYEKLLYLQLEALKNKKYEFSN-----KSLTHFGEQIRNYIL 296

Query: 318 QPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349
              +M+KD RTN+  T    VL  G+++ F+ A
Sbjct: 297 YGNKMIKDTRTNVFSTDVDRVLSQGEIELFVDA 329


>gi|240279273|gb|EER42778.1| peptide chain release factor 1 [Ajellomyces capsulatus H143]
          Length = 438

 Score =  139 bits (349), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 29/224 (12%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171
           LE+  GAGG E+  +AN LLRMYT +   R  +   L+        + G E  +  A + 
Sbjct: 150 LELRPGAGGEEAGIFANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVME 209

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------DDSIEIEIS 224
           I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P         D  +  +  
Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDP 269

Query: 225 ESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            SD  ID         RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW
Sbjct: 270 NSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329

Query: 278 NMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSY 315
           ++LRA++ +   + REE         +G  +K  +G G +IR+Y
Sbjct: 330 HLLRARIAQQRREAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 371


>gi|307565625|ref|ZP_07628103.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
 gi|307345657|gb|EFN91016.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
          Length = 370

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 163/323 (50%), Gaps = 35/323 (10%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101
           +M  R+     ++ IKE +D L +  +  + E+A EE  D  ILQ         KLE E 
Sbjct: 50  IMEARKRYIACLTTIKEAKDILANENDPDMKEMAREELSDNEILQP--------KLEEEI 101

Query: 102 KQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           K    LL    DS DA    +EV AG GG E+  +A  +  MY R+ +K+ +     +I+
Sbjct: 102 K----LLLVPKDSEDAKNVQMEVRAGTGGDEAALFAGDIFNMYKRFCDKKGWTLSVTDIN 157

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           +G   G K     I G   YG LK E GVHR+ R+   D+  R  TS +++ V P   D 
Sbjct: 158 EGAVGGFKEIDFAISGEGVYGILKYESGVHRVQRVPSTDTQGRMQTSAATVAVLPEA-DK 216

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQ 269
            E+ I+E D + DT+R+SGAGGQ+VN  +S VR+ + P     TG    ++++C + R Q
Sbjct: 217 FEVNINEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEIEEILIECTETRDQ 275

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KNK +A + LR  +Y+ E QK   I +I    K+ +  G    +IR+Y   P   V D 
Sbjct: 276 PKNKERALSRLRTFIYDREHQKY--INDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDH 332

Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349
           R           ++G++ + + A
Sbjct: 333 RIGFTSHDLPGFMNGNIQEMIDA 355


>gi|223997436|ref|XP_002288391.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975499|gb|EED93827.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 366

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 26/282 (9%)

Query: 22  RLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           R SF  L  +  DP +  +    + +M++R   +  +       D  C     LE A E 
Sbjct: 15  RRSFQALTERLADPDVIADSNLLRQVMKDRSQSEETVQAF----DEYCQLETELEGAQE- 69

Query: 80  DDCSILQETSDNLQRIKL--------EVEYKQFESLLS------GEADSNDAYLEVHAGA 125
               + QE  D+++  ++        EV   + E+L+          D  +  LE+ AG 
Sbjct: 70  ----LFQEAGDDVEMREMARSEMKEIEVRLDELETLIKILLLPKDPNDDRNCMLEIRAGT 125

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG+E+  +A  LL +Y ++     ++   ++   G++ G K+  L +KG + Y  LK E 
Sbjct: 126 GGSEANIFAGDLLDVYRKFMSAEGWQVSMMDSSPGDDGGYKNVVLEVKGDSVYSKLKWEA 185

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +++ + P  D+ ++++I   D  + T R+ GAGGQ+VN 
Sbjct: 186 GVHRVQRVPATETQGRVHTSTATVAIMPECDE-VDVKIDPKDIEMSTMRSGGAGGQNVNK 244

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            ++AV + H PTG+ ++C QERSQ KNK  A  ML A+LY++
Sbjct: 245 VETAVDLLHKPTGIRIKCTQERSQLKNKELAMKMLMARLYDI 286


>gi|164660096|ref|XP_001731171.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
 gi|159105071|gb|EDP43957.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
          Length = 395

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 132/254 (51%), Gaps = 26/254 (10%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE-------------------- 153
           S  A +E+  G GG ES  +   +LRMY ++ E R  K +                    
Sbjct: 109 SKGAIMELRQGVGGQESCLFLGEMLRMYIKFCETRAQKAQDEDDPSMLGAGWSTDLLSAT 168

Query: 154 ALEIHDGEEAG--IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            +++     AG   + A L I GPNA+  L+ E GVHR+ RI    +  +  TS  +I V
Sbjct: 169 PVDVSATSGAGDAYREAILQIHGPNAFEALRFEAGVHRVQRIPATQNLGKLQTSTMAIIV 228

Query: 212 YPV-VDDSIEIEISES-DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            P+  ++ +  +I +S D R++T RA GAGGQHVN T+SAVR+TH P+G+ V  Q  RSQ
Sbjct: 229 LPMQAENDVSKDIVDSKDVRVETMRARGAGGQHVNRTESAVRLTHDPSGITVSMQDSRSQ 288

Query: 270 HKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           H+N+ +AW++LRA+L ++ LQK   E   +  S         ++R+Y   P   V D R 
Sbjct: 289 HQNRVKAWDVLRARLLDIHLQKEASENRALRRSQVASAERSERVRTYNF-PQDRVTDHRI 347

Query: 329 NIEKTSPSDVLDGD 342
            I  +     +DGD
Sbjct: 348 GISLSDIHRFMDGD 361


>gi|302346475|ref|YP_003814773.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
 gi|302150829|gb|ADK97090.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
          Length = 370

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 27/319 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101
           +M  R+   N ++ IKE +D + +  +  + E+A EE  +   LQ   +  + IKL +  
Sbjct: 50  IMDARRRYINCLTTIKEAKDIIANESDAEMKEMAREELSENEALQPALE--EEIKLLLVP 107

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           K  E       D+ +  +E+  GAGG E+  +A  L  MY R+ +K+ +K     + +G 
Sbjct: 108 KDPE-------DAKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSITSVSEGT 160

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+
Sbjct: 161 AGGFKEIDFAVEGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 219

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNK 273
            I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK
Sbjct: 220 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNK 279

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A + L   +Y+ E QK   + +I    KT +  G    +IR+Y   P   V D R   
Sbjct: 280 ERALSRLYTYIYDHEHQKY--VDDIASRRKTLVSTGDRSAKIRTYNY-PQGRVTDHRIGF 336

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                   ++G++ D + A
Sbjct: 337 TTHDLQGFMNGEIQDMIDA 355


>gi|219129897|ref|XP_002185114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403293|gb|EEC43246.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 283

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 148/281 (52%), Gaps = 38/281 (13%)

Query: 81  DCSILQETSDNLQRIKLE---VEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWAN 135
           D  + +E  + LQR+  E   +E    +++L  + D   +DA +E+ AG GG E+  +A+
Sbjct: 9   DKDMQRECENELQRVDRERAVLEGLIVDAVLPEDEDDYESDAIIEIRAGTGGDEASLFAS 68

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------------------ 177
            LL  Y + A   ++K E L     +  GI+ A++ I G NA                  
Sbjct: 69  ELLEAYQKAAMAIRWKVEVLAESRTDIGGIREASISISG-NASFRLPATDSEREDSGPLL 127

Query: 178 --YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---ISESDCRIDT 232
             YG  K E GVHR+ R+   DS  R HTS  SI V P V  SI  E   +  S+ RI+T
Sbjct: 128 GPYGAFKFESGVHRVQRVPINDS--RIHTSACSIAVLPFVS-SISNEKELLPMSELRIET 184

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SGAGGQHVNTTDSAVRITH+PTG+    Q ERSQHKNKA+A  ++ A++   + Q+ 
Sbjct: 185 MRSSGAGGQHVNTTDSAVRITHLPTGITAAIQDERSQHKNKAKALKLITARVR--DRQRT 242

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
           +     GE     +G G    +IR+Y   P   + D R  +
Sbjct: 243 DAQLARGELRSNLMGGGDRSERIRTYNY-PQDRITDHRCKV 282


>gi|119195451|ref|XP_001248329.1| peptide chain release factor 1, mitochondrial precursor (MRF-1)
           [Coccidioides immitis RS]
          Length = 438

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 25/256 (9%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDG-----EEAGIKSATLL 171
           +E+  GAGG E+  +A+ LLRMY  +  +   +T  L  ++ DG      E  +  A + 
Sbjct: 149 VEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKKDVEDGAGGSGSEDRLSEAVME 208

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----------DDSIE 220
           I+ P +Y  L+ E GVHR+ RI   ++  R HTS  S+ + P             D + +
Sbjct: 209 IEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFSEQNDSALNFDDPNSD 268

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             I+  D + +  RASGAGGQHVN T+SA+R+TH+PT  VV  Q  RSQH+N+ +AW +L
Sbjct: 269 YYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTSTVVAVQDSRSQHENRRKAWRLL 328

Query: 281 RAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           R+K+ ++  + RE    E+          +G G ++R+Y     +   D R+ +   +  
Sbjct: 329 RSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTYNFGQNRCT-DHRSGVTIHNLG 387

Query: 337 DVLDG--DLDDFMKAT 350
            VLDG   LD+ M++ 
Sbjct: 388 SVLDGGEGLDNIMESV 403


>gi|310796023|gb|EFQ31484.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
          Length = 397

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 23/189 (12%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168
           LE+  G GG E + +A+ L RMY ++  ++ ++ E ++    + AG          ++ A
Sbjct: 114 LEIRPGPGGLEGRFFADTLFRMYKQYCSRKGYRAEVIKYETADAAGDQSTAAGESPLQEA 173

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS---------- 218
            + I  P AY   +GE G+HR+ RI   + N R HTS  ++WV P   +S          
Sbjct: 174 IVEIHDPGAYDLFRGEAGMHRVQRIPATEKNGRVHTSAVAVWVLPSFQESGGEGGAQDMD 233

Query: 219 ---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
               +  I  ++ +I+T RA GAGGQHVN T+SA+R+TH+PTG VV  Q  RSQ +N+  
Sbjct: 234 NPESDFYIDPAEVKIETMRARGAGGQHVNKTESAIRMTHVPTGTVVSMQDSRSQSRNRED 293

Query: 276 AWNMLRAKL 284
           AW ++R+++
Sbjct: 294 AWKLMRSRV 302


>gi|303310501|ref|XP_003065262.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240104924|gb|EER23117.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034924|gb|EFW16867.1| peptide chain release factor 1 [Coccidioides posadasii str.
           Silveira]
          Length = 438

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 25/256 (9%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDG-----EEAGIKSATLL 171
           +E+  GAGG E+  +A+ LLRMY  +  +   +T  L  ++ DG      E  +  A + 
Sbjct: 149 VEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKKDVEDGAGGSGSEDRLSEAVME 208

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----------DDSIE 220
           I+ P +Y  L+ E GVHR+ RI   ++  R HTS  S+ + P             D + +
Sbjct: 209 IEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFSEQNDSALNFDDPNSD 268

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             I+  D + +  RASGAGGQHVN T+SA+R+TH+PT  VV  Q  RSQH+N+ +AW +L
Sbjct: 269 YYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTSTVVAVQDSRSQHENRRKAWRLL 328

Query: 281 RAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           R+K+ ++  + RE    E+          +G G ++R+Y     +   D R+ +   +  
Sbjct: 329 RSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTYNFGQNRCT-DHRSGVTIHNLG 387

Query: 337 DVLDG--DLDDFMKAT 350
            VLDG   LD+ M++ 
Sbjct: 388 SVLDGGEGLDNIMESV 403


>gi|288802476|ref|ZP_06407915.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
 gi|288335004|gb|EFC73440.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
          Length = 370

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 27/319 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101
           +M  R+   N ++ IKE +D + +  +  + E+A EE  +   LQ   +  + IKL +  
Sbjct: 50  IMDARRRYINCLTTIKEAKDIITNENDAEMKEMAREELSENEALQPALE--EEIKLLLVP 107

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           K  E       D+ +  +E+  GAGG E+  +A  L  MY R+ +K+ +K     + +G 
Sbjct: 108 KDPE-------DAKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKDWKLSITSVSEGT 160

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     ++G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+
Sbjct: 161 AGGFKEIDFAVEGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 219

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNK 273
            I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK
Sbjct: 220 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNK 279

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A + L   +Y+ E QK   + +I    KT +  G    +IR+Y   P   V D R   
Sbjct: 280 ERALSRLYTYIYDHEHQKY--VDDIASRRKTLVSTGDRSAKIRTYNY-PQGRVTDHRIGF 336

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                   ++G++ D + A
Sbjct: 337 TTHDLQGFMNGEIQDMIDA 355


>gi|150002702|ref|YP_001297446.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254882204|ref|ZP_05254914.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294776956|ref|ZP_06742417.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|319643236|ref|ZP_07997864.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
 gi|149931126|gb|ABR37824.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254834997|gb|EET15306.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294449204|gb|EFG17743.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|317385140|gb|EFV66091.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 132/246 (53%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LE+  G GG E+  +A  L RMY+++ E + ++ E    ++G   G K     +
Sbjct: 113 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCETKGWRLEVSSANEGAAGGFKEIICSV 172

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +S+ V P   +  ++EI+E + + DT
Sbjct: 173 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 231

Query: 233 YRASGAGGQHVNTTDSAVRI--------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+        T I   ++++C + R Q KNK +A + LR  +
Sbjct: 232 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFI 291

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 292 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 348

Query: 342 DLDDFM 347
           D+ D +
Sbjct: 349 DIQDCI 354


>gi|46117472|ref|XP_384754.1| hypothetical protein FG04578.1 [Gibberella zeae PH-1]
          Length = 445

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 37/303 (12%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAY------LEVHAGAGGTES 130
           DD S+ Q+ +  + R +L  E  Q E+L   LS        +      LE   G GG E 
Sbjct: 114 DDASLDQDLA-AIARDELSSETGQLEALARKLSASLTPRHPFADFPCMLEFRPGPGGLEG 172

Query: 131 QDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE--------EAGIKSATLLIKGPNAYGW 180
           + + + L +MY     +R ++   +  E  DG         E  ++ A L +    A+  
Sbjct: 173 RFFMDTLFKMYKGLCMRRGYRHTVVKYEFADGAGDSSSSAGENPLQEAILEVHDQGAFDI 232

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD----SIEIEISESD-------CR 229
            +GE G+HR+ RI   ++  R HTS  ++WV P   +    SI+ E  ESD        +
Sbjct: 233 FRGEAGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENSATSIDFEDPESDFYVNPQELK 292

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           I+T RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+ +AW ++R+++ +   
Sbjct: 293 IETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLMRSRIADQRR 352

Query: 290 QKRE-EIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLD 344
           ++RE E + +  S  SKT+I  G +IR+Y         D R  I+     +VL+G   LD
Sbjct: 353 EQREQEASQLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHGLPNVLEGGEKLD 411

Query: 345 DFM 347
             M
Sbjct: 412 KIM 414


>gi|225685111|gb|EEH23395.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb03]
          Length = 316

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 35/227 (15%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171
           LE+  GAGG E+  +AN LLRMYT +   R  +   L+          G E  +  A + 
Sbjct: 28  LELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVME 87

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--------------DD 217
           I+ P +Y  L+ E GVHR+ R+   +S  R HTS  S+ + P                D 
Sbjct: 88  IETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDP 147

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           + +  I   +  ++  RASGAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW
Sbjct: 148 NSDFYIDPQEVNVEKMRASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 207

Query: 278 NMLRAKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSY 315
            +LRA++ +   +         +R  +  +G     ++G G +IR+Y
Sbjct: 208 QLLRARIAQRRREAREEEMVKLRRGAMGGVG-----KMGRGDKIRTY 249


>gi|226493092|ref|NP_001141218.1| hypothetical protein LOC100273305 [Zea mays]
 gi|194703328|gb|ACF85748.1| unknown [Zea mays]
          Length = 407

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 122/221 (55%), Gaps = 24/221 (10%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168
           LE   G GG E + + + L +MY     +R ++   ++    + AG          ++ A
Sbjct: 125 LEFRPGPGGLEGRYFMDTLFKMYKALCMRRGYRHTVVKYEFADTAGDSSSSAGENPLQEA 184

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS----IEIEIS 224
            L +  P A+   + E G+HR+ RI   ++  R HTS  ++WV P   ++    I+ +  
Sbjct: 185 ILEVHDPGAFDIFRSEAGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENGAANIDFDDP 244

Query: 225 ESD-------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           ESD        +I+T RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+ +AW
Sbjct: 245 ESDFYVNPQEVKIETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAW 304

Query: 278 NMLRAKLYELELQKREEIA-NIGES--SKTEIGWGRQIRSY 315
            +LR+++ +   + REE A N+  S  SKT+I  G +IR+Y
Sbjct: 305 KLLRSRIADQRREAREEEASNLRNSVLSKTQITRGDKIRTY 345


>gi|87300884|ref|ZP_01083726.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
 gi|87284755|gb|EAQ76707.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
          Length = 367

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 1/177 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   D     LE+ AG GG E+  WA  L RMY R+A+   +  + L   + +  G K
Sbjct: 106 LPSDPRDERSVMLEIRAGTGGDEAALWAGDLARMYERFAQTVGWSVQPLSASESDLGGFK 165

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              L I+G   Y  LK E GVHR+ R+   +S  R HTS +++ V P   D +E+++  +
Sbjct: 166 ELILAIRGDGVYSQLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVEVQLDPA 224

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           D  I T R+ GAGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAK
Sbjct: 225 DLDISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAK 281


>gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 480

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 133/247 (53%), Gaps = 19/247 (7%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE----IHDGEEAGIKSATLLI 172
           A + ++AG GG ES      L RMY R+A  R +K E +            GI+  T+  
Sbjct: 213 AVMSLNAGVGGLESALCTEDLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKF 272

Query: 173 KGPN-------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-IS 224
           + P         YG L+ E+GVHR+ R+   ++  R HTS  ++ V P+  D+ E   + 
Sbjct: 273 EPPQYAEEGIEVYGALQWEKGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVD 332

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D RID  RA GAGGQHVN T+SAVR+THIPTG+ V  Q  RSQH+N+  AW +LRA+L
Sbjct: 333 PKDVRIDVMRARGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNRTWAWEILRARL 392

Query: 285 YELELQKREEIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              E +  EE+     S + ++ G  R  +IR+Y     ++  D R  I  T    VLDG
Sbjct: 393 S--EKKHNEEVEARRASRRDQVKGADRSDKIRTYNFNQDRLT-DHRFGITVTGLQHVLDG 449

Query: 342 D-LDDFM 347
           + L+D +
Sbjct: 450 EGLEDVI 456


>gi|255945217|ref|XP_002563376.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588111|emb|CAP86182.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 423

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 130/247 (52%), Gaps = 28/247 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL----EIHDGEEAGIKSATLLIKG 174
           LE+  GAGG E+  +A  +LRMY  +  +R  +   L    E+   E+  +  A + I+ 
Sbjct: 147 LEIRPGAGGDEAGLFAFEMLRMYVAFCSRRGLRPTILKQDTEVGPSEDR-LSEAVIEIQA 205

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD 227
             AY  L+ E GVHR+ R+   ++  R HTS  S+ V P        +D+++  E   SD
Sbjct: 206 NGAYDILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPEDTSEMDNALNFEDPSSD 265

Query: 228 -------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
                   R++  RA GAGGQHVN T+SA+R+THIPT  VV  Q ERSQ  N+ +AW +L
Sbjct: 266 YYIDPQEVRVEKMRAGGAGGQHVNKTESAIRLTHIPTNTVVSMQDERSQQANRRKAWQVL 325

Query: 281 RAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           RAKL E   + RE+         +G  +K  +G G +IR+Y     +   D RT I   +
Sbjct: 326 RAKLAEARQEAREQELMQLRRGILGGVAK--MGRGDKIRTYNFGQSRCT-DHRTGITIHN 382

Query: 335 PSDVLDG 341
              +LDG
Sbjct: 383 LDGILDG 389


>gi|294994856|ref|ZP_06800547.1| peptide chain release factor 1 [Mycobacterium tuberculosis 210]
          Length = 206

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 163 AGIKSATLLIKG----PNA-YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            G K ATL I      P+  +  +K E GVHR+ R+   +S  R HTS + + VYP  ++
Sbjct: 2   GGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEE 61

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
             +++I ESD RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A 
Sbjct: 62  VGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRAL 121

Query: 278 NMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
            +L A+L  +  ++    A+   +S+   +    +IR+Y   P   + D R   +  +  
Sbjct: 122 QVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNLD 180

Query: 337 DVLDGDLDDFMKATLAIKK 355
            VLDGDLD    A  A  K
Sbjct: 181 QVLDGDLDALFDALSAADK 199


>gi|224043444|ref|XP_002196330.1| PREDICTED: mitochondrial translational release factor 1
           [Taeniopygia guttata]
          Length = 418

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 134/249 (53%), Gaps = 13/249 (5%)

Query: 102 KQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           K F+ L+  E  D +   LEV AG   GG   Q +   +  MY  +A+ +++  + +   
Sbjct: 140 KLFQLLVPKEKYDRSSVILEVTAGRTTGGDICQQFTKEMFDMYQSYADYKRWTFDIVNYT 199

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215
             E  G+  A   I G N Y  LK E G HR+ RI     +SR    HT   S+ V P  
Sbjct: 200 PAEIGGLHHAAAHISGENVYRHLKYEGGTHRVQRIPETGMSSRMQRIHTGTMSVIVLPQP 259

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           ++ +++++   D RIDT+RA GAG QHVN TDSAVRI H+PTG+ V+CQQERSQ  NK  
Sbjct: 260 EE-VDVKVDPKDLRIDTFRAKGAGEQHVNKTDSAVRIVHLPTGLAVECQQERSQQLNKEI 318

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEK 332
           A   LRAKLY+  ++K  +++    + K ++G   Q   IR+Y       V D R + + 
Sbjct: 319 ALRTLRAKLYQQLVEK--QLSQEQSARKLQLGTRAQSERIRTYNFT-QDRVTDHRISYDA 375

Query: 333 TSPSDVLDG 341
            +  ++L G
Sbjct: 376 RNIKEILSG 384


>gi|210076204|ref|XP_504279.2| YALI0E22759p [Yarrowia lipolytica]
 gi|199426952|emb|CAG79876.2| YALI0E22759p [Yarrowia lipolytica]
          Length = 389

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 11/233 (4%)

Query: 80  DDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQDWAN 135
           DD  + ++  D +  ++ E E   K+ E+LL       D    +E+  G GG E+  + +
Sbjct: 95  DDPELKKDAEDEIPTVEAEAEKAIKKLETLLLPTHPYGDIGCIIEMRPGIGGEEACLFTD 154

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LL MYT +A++  +  +   +   ++ GI    L + G  +Y  L+ E GVHR+ R+  
Sbjct: 155 NLLNMYTGYADEMGWPYQITNVTRNDKGGITEVILSVDGEGSYNMLQHEGGVHRVQRVPV 214

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSI----EIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
            +S+ R HTS +++ V P + +S     +I+ +  + RID  RA GAGGQHVN T+SAVR
Sbjct: 215 TESSGRVHTSAAAVIVLPQISESSVAADDIQFAPGEVRIDVMRAQGAGGQHVNKTESAVR 274

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           + HIPT  +V  Q  RSQ +NK  A+ +LR +L E   QKR E A   ++++T
Sbjct: 275 LVHIPTKTMVVMQNSRSQRQNKEMAFMILRGRLAE---QKRREQAAKSKNART 324


>gi|258648524|ref|ZP_05735993.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
 gi|260851292|gb|EEX71161.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 171/351 (48%), Gaps = 33/351 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-----NLI 71
           D    R   ++T   DP +  +      L +E + L++ +   K   + L +     NL+
Sbjct: 13  DGLRSRFEEVSTLITDPSVIADQTRYVRLTKEYKELEDLMQARKRYAELLSNLQESKNLL 72

Query: 72  LLELALE------EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L E   E      E+  +   E     ++IKL +  K  E       D  +A LE+ AG 
Sbjct: 73  LTETDAELKELAREEVAACEAEIPTCEEQIKLMLVPKDPE-------DGKNAILEIRAGT 125

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY ++ E + +K E    ++G   G K     + G + YG LK E 
Sbjct: 126 GGDEAALFAGDLFRMYAKFCESKGWKFEVSSANEGAVGGFKEVVASVTGADVYGTLKYES 185

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +++ V P   ++ ++EI E + R +T+R+SGAGGQ+VN 
Sbjct: 186 GVHRVQRVPATETQGRVHTSAATVAVLPEA-EAFDVEIHEGEIRWETFRSSGAGGQNVNK 244

Query: 246 TDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            +S VR+ +      TG    ++++C + R Q KNK +A   LR  +Y+ E QK   + +
Sbjct: 245 VESGVRLRYDWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--VDD 302

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           I    KT +  G    +IR+Y   P   + D R N    +    +DGD+ D
Sbjct: 303 IANRRKTLVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLPAFVDGDIQD 352


>gi|67526009|ref|XP_661066.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
 gi|40743816|gb|EAA63002.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
          Length = 367

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 25/225 (11%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L   SDNL+R    V    F  L           LE+  GAGG E+  +A  LL+MY  +
Sbjct: 94  LTAISDNLKRAL--VPRHPFADL--------SCLLEIRPGAGGDEASIFAFELLQMYVAF 143

Query: 145 AEKRKFKTEALEIHDGEEAG--IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
              +  ++  +++  G+     +  A L ++   AY  L+ E GVHR+ R+   ++  R 
Sbjct: 144 CAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRT 203

Query: 203 HTSFSSIWVYPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           HTS  S+ V P   D+              +  I   + R +  RASGAGGQHVN T+SA
Sbjct: 204 HTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESA 263

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +R+TH+PTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE+
Sbjct: 264 IRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 308


>gi|213403996|ref|XP_002172770.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000817|gb|EEB06477.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 312

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/234 (38%), Positives = 135/234 (57%), Gaps = 20/234 (8%)

Query: 72  LLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           LL+LA E ++  I+++T D L+ +   L ++   +++          A LEV AG GG+E
Sbjct: 9   LLQLA-ESENNEIMKKTHDVLEGMHKLLSLKPNNYQA---------PALLEVRAGVGGSE 58

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVH 188
           +  +A+ LL MY R+   R +K + L +   E   GI  A + + G + YG L  E GVH
Sbjct: 59  AALFASELLSMYERYCAFRNWKWKPLSLSKTENGNGITEAIVSVSG-HVYGELFHEAGVH 117

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNT 245
           R+ R    ++  R HTS  S+ V P V+      E ++  +D R+D  RA GAGGQHVN 
Sbjct: 118 RVQRTPATETKGRLHTSTVSVIVLPTVNSQTLETESKLDANDIRVDVMRAKGAGGQHVNR 177

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---LQKREEIA 296
           T+SAVR+THIP+G+ V  Q  RSQH+NK +A  +LR+++  L    LQK++  A
Sbjct: 178 TESAVRLTHIPSGITVCMQDSRSQHENKERALLILRSRVAALRHENLQKQQHDA 231


>gi|259485545|tpe|CBF82657.1| TPA: mitochondrial translation release factor (RF-1), putative
           (AFU_orthologue; AFUA_3G05410) [Aspergillus nidulans
           FGSC A4]
          Length = 418

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 25/225 (11%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L   SDNL+R    V    F  L           LE+  GAGG E+  +A  LL+MY  +
Sbjct: 122 LTAISDNLKRAL--VPRHPFADL--------SCLLEIRPGAGGDEASIFAFELLQMYVAF 171

Query: 145 AEKRKFKTEALEIHDGEEAG--IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
              +  ++  +++  G+     +  A L ++   AY  L+ E GVHR+ R+   ++  R 
Sbjct: 172 CAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRT 231

Query: 203 HTSFSSIWVYPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           HTS  S+ V P   D+              +  I   + R +  RASGAGGQHVN T+SA
Sbjct: 232 HTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESA 291

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +R+TH+PTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE+
Sbjct: 292 IRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 336


>gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462]
          Length = 198

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 7/190 (3%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K   ++I G N Y  LK E G HR+ R+   +S  R HTS +++ V P  D+ ++++I  
Sbjct: 1   KEVVVMITGDNVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMPEYDE-VDLKIDP 59

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R D YR+SGAGGQHVN T SAVR+THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y
Sbjct: 60  KDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVY 119

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +    + +E     ++ K  IG G    +IR+Y   P   V D R  +       +++G+
Sbjct: 120 DYYETENQE--KYDQNRKNAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGE 176

Query: 343 LDDFMKATLA 352
           LD+ + A + 
Sbjct: 177 LDEIIDALIV 186


>gi|255637443|gb|ACU19049.1| unknown [Glycine max]
          Length = 155

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/138 (51%), Positives = 96/138 (69%), Gaps = 4/138 (2%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D+S+ +EI E D  I   RA G GGQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +
Sbjct: 6   DESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIR 65

Query: 276 AWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           A + L+AKL  + E Q+  EI  I G++ K E  WG+QIR+YV  PY++VKD+RT  E T
Sbjct: 66  ALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNYVFHPYKLVKDVRTGHETT 123

Query: 334 SPSDVLDGDLDDFMKATL 351
             + V+DG+LD F+K+ L
Sbjct: 124 DITSVMDGELDPFIKSYL 141


>gi|149237364|ref|XP_001524559.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452094|gb|EDK46350.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 392

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+  G GG E+  + + L++MY  +A  + +    +         +    L I  P AY
Sbjct: 134 IELRPGVGGNEASLFTDDLMQMYLNFASIQSWPALVISRSTNSSGFVNEIILSINQPGAY 193

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRID 231
             L+ E GVHR+ RI   ++  R HTS S++ + P + D       + E++    + RID
Sbjct: 194 DVLRHESGVHRVQRIPETENKGRVHTSTSAVIILPKMSDGNENSLRADEMQFKPGEVRID 253

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           T RA G GGQHVNTTDSAVR+ HIPTG++V  Q ERSQ +NKA+A+ +LRA+L E E
Sbjct: 254 TMRAGGKGGQHVNTTDSAVRLVHIPTGIMVMQQDERSQPQNKAKAFAILRARLAEKE 310


>gi|218263804|ref|ZP_03477780.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222477|gb|EEC95127.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
          Length = 369

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 15/242 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  G GG E+  +A  L RMY ++ E + +K       +G   G K     +
Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P  D+  ++EI+E + + DT
Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHI---P-TGV----VVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ ++   P TGV    +++C + R Q KNK +A   LR+ +
Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFI 289

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   + +I    KT +  G    +IR+Y   P   + D R N    + S  +DG
Sbjct: 290 YDKEHQKY--LDDIANKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346

Query: 342 DL 343
           D+
Sbjct: 347 DI 348


>gi|319901262|ref|YP_004160990.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
 gi|319416293|gb|ADV43404.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
          Length = 370

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 133/244 (54%), Gaps = 15/244 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS +A LE+  G GG E+  +A  L RMY+++ + + +K E    ++G   G K     +
Sbjct: 112 DSRNAILEIRGGTGGDEAAIFAGDLFRMYSKFCDIKGWKLEVSSANEGAAGGFKEIICSV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG +K E GVHR+ R+   ++  R HTS +S+ V P  ++  ++ I+E + + DT
Sbjct: 172 TGDGVYGTMKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ +      TGVV    ++C + R Q KNK +A + LR  +
Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   I +I    KT +  G    +IR+Y   P   + D R N    + +  +DG
Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347

Query: 342 DLDD 345
           D+ D
Sbjct: 348 DIQD 351


>gi|154490829|ref|ZP_02030770.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
 gi|154088577|gb|EDN87621.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
          Length = 369

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 15/242 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  G GG E+  +A  L RMY ++ E + +K       +G   G K     +
Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P  D+  ++EI+E + + DT
Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229

Query: 233 YRASGAGGQHVNTTDSAVRITHI---P-TGV----VVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR+ ++   P TGV    +++C + R Q KNK +A   LR+ +
Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFI 289

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   + +I    KT +  G    +IR+Y   P   + D R N    + S  +DG
Sbjct: 290 YDKEHQKY--LDDIANKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346

Query: 342 DL 343
           D+
Sbjct: 347 DI 348


>gi|260592403|ref|ZP_05857861.1| peptide chain release factor 1 [Prevotella veroralis F0319]
 gi|260535639|gb|EEX18256.1| peptide chain release factor 1 [Prevotella veroralis F0319]
          Length = 370

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 27/319 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+     ++ IKE +D + +  +  + E+A EE     L E  +   R++ E+   
Sbjct: 50  IMDARKRYITCLTTIKEAKDIIANESDAEMKEMAREE-----LAENEELQPRLEEEI--- 101

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   +     D+ +  +E+  GAGG E+  +A  L  MY R+ +K+ +K     + +G  
Sbjct: 102 KILLVPKDPEDAKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSITSVSEGAV 161

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     ++G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 162 GGFKEIDFAVEGENVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNK 273
           I+E D + DT+R+SGAGGQ+VN  +S VR+ + P     TG    ++++C + R Q KNK
Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEVEEILIECTETRDQPKNK 279

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A + L   +Y+ E QK   I +I    KT +  G    +IR+Y   P   V D R   
Sbjct: 280 ERALSRLYTYIYDHEHQKY--IDDIASRRKTLVSTGDRSAKIRTYNF-PQGRVTDHRIGF 336

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                   ++G++ + + A
Sbjct: 337 TTHDLQGFMNGEIQEMIDA 355


>gi|297304301|ref|XP_001086824.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like,
           partial [Macaca mulatta]
          Length = 346

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 111/199 (55%), Gaps = 17/199 (8%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE    E  G++ A+  I G  AY  +K E GVHR+ R+       R HTS  ++ + P 
Sbjct: 133 LEYFPSEIGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTQKQGRIHTSTMTVAILPQ 192

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + I + I+  D RIDT +ASGAGGQHVNTTDSAVRI H+PT VV +CQQERSQ KN+ 
Sbjct: 193 PTE-INLVINPKDLRIDTKQASGAGGQHVNTTDSAVRIVHLPTSVVSKCQQERSQLKNRE 251

Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            A   LRAKLY + L+    KR+    I   SK   G   +IR+Y   P   V D R  I
Sbjct: 252 LAMTKLRAKLYSMHLEKETNKRQNARKIRIGSK---GRSEKIRTYNF-PQNRVTDHR--I 305

Query: 331 EKTSPSDVLDGDLDDFMKA 349
            KT        DL+ FM+ 
Sbjct: 306 SKTL------HDLETFMQG 318


>gi|332876543|ref|ZP_08444305.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685510|gb|EGJ58345.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 370

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 19/341 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   + T   DP++  +      L +E + L + +   KE  D L       E+   E
Sbjct: 15  VSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQDAKEMLATE 74

Query: 80  DDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  + +   + +   +  + E ++   LL   AD  D     +E+  G GG E+  +A 
Sbjct: 75  DDPEMKEMAREEMAATEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTGGDEAALFAG 134

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMYT++ E + +K       +G   G K     + G   YG LK E GVHR+ R+  
Sbjct: 135 DLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESGVHRVQRVPA 194

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            ++  R HTS +++ V P   +  ++EI+E + + DT+R+SGAGGQ+VN  +S VR  ++
Sbjct: 195 TETQGRVHTSAATVAVLPEAQE-FDVEINEGEIKWDTFRSSGAGGQNVNKVESGVRARYL 253

Query: 256 ---P-TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
              P TG    ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    KT + 
Sbjct: 254 WKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIANRRKTMVS 311

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            G    +IR+Y   P   + D R      +    +DG++ D
Sbjct: 312 TGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQD 351


>gi|320592214|gb|EFX04653.1| mitochondrial translation release factor [Grosmannia clavigera
           kw1407]
          Length = 437

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 23/189 (12%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHD--GE-----EAGIKSAT 169
           LE   G GG E + + + L  MY  +  ++ ++   +  E+ D  GE     E+ ++ A 
Sbjct: 145 LEFRPGPGGLEGRFFTDSLFHMYQSYCTRQGYRARVIKYEVSDSLGETGADGESALQEAV 204

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---------- 219
           L ++   AY   +GE G+HR+ RI   + N R HTS +++WV P   DS           
Sbjct: 205 LEVQEAGAYDVFRGEAGIHRVQRIPATEKNGRTHTSAAAVWVLPSFPDSSGEGDSANDYD 264

Query: 220 ----EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
               +  +  +D R++T RA GAGGQHVN T+SA+R+TH+P+G VV  Q  RSQH+N+  
Sbjct: 265 DPESDFYVQPADVRVETMRARGAGGQHVNKTESAIRLTHVPSGTVVSMQDSRSQHQNRDS 324

Query: 276 AWNMLRAKL 284
           AW +LRA++
Sbjct: 325 AWKILRARI 333


>gi|242814526|ref|XP_002486386.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218714725|gb|EED14148.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 427

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 130/249 (52%), Gaps = 33/249 (13%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----IKSATLLIKG 174
           LE+  GAGG E+  +A  LLRMY  +  ++  +T  ++  D EE+     +  A + I+ 
Sbjct: 149 LEIRPGAGGDEAGLFAYELLRMYQSFCSRKGLRTSIVK-QDMEESTSNDRVTEAVVEIET 207

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------DDSIEIEISESD- 227
           P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P        +D++  E   SD 
Sbjct: 208 PGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPSFPESGANEDNLNFEDPNSDY 267

Query: 228 ------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
                  R +  RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQH N+ +AW +LR
Sbjct: 268 YVNPQEVRSEKMRASGAGGQHVNKTESAIRLTHIPTGLTVSMQDSRSQHANRKKAWQLLR 327

Query: 282 AKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           AKL E   +         +R  +  +      ++G G ++R+Y     +   D R+ I  
Sbjct: 328 AKLAERRREAREEEMVKLRRGAMGGVA-----KMGRGDKVRTYNFSQSRCT-DHRSGITV 381

Query: 333 TSPSDVLDG 341
                VLDG
Sbjct: 382 HDLDSVLDG 390


>gi|168705097|ref|ZP_02737374.1| peptide chain release factor 1 [Gemmata obscuriglobus UQM 2246]
          Length = 358

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 16/337 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R + L  +  DP +  + ++A  + +ER  L   +    E + RLC  +   E+   + D
Sbjct: 11  RYAELEQQLYDPAIAGDPVKAGAIGKERGALAKIVEPYIEYK-RLCRAIADAEVMAADPD 69

Query: 82  CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +      R K +  + + E   LL    D +   +E+ AG GG E+  +A  L  
Sbjct: 70  LKDMADEELADLRPKRDALHARIEEKLLLDPSEDFSKLIIEIRAGTGGDEAALFAGNLYE 129

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTR+A ++ +K E +    GE  G K     + G + Y  L+ E G HR+ R+   ++ 
Sbjct: 130 MYTRYAREKGWKIEEIASSPGEAGGFKEVAFGVTGDDVYQLLRYESGGHRVQRVPATETQ 189

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISES-DCRIDTYRASGAGGQHVNTTDSAVRITH---I 255
            R HTS +++ V P  +++ ++EI+E+ D   +  RA GAGGQHVN T+SAVRI +    
Sbjct: 190 GRIHTSAATVAVLPEPEEA-QVEINEANDIEWERMRAGGAGGQHVNKTESAVRIWYKKGT 248

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG---RQ 311
           P  + V+CQ  RSQ KN  QA  +LR++L+E + ++   E A++    K +IG G    +
Sbjct: 249 PDEMEVKCQDGRSQGKNYEQAMRILRSRLFERQQERIHRERASM---RKEQIGSGDRNAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P     D R          ++ G LD  ++
Sbjct: 306 IRTYNF-PQNRCTDHRIEFTVYKLDAIMAGALDQMIQ 341


>gi|330995510|ref|ZP_08319414.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
 gi|329575422|gb|EGG56964.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
          Length = 370

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 19/341 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   + T   DP++  +      L +E + L + +   KE  D L       E+   E
Sbjct: 15  VSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQDAKEMLAIE 74

Query: 80  DDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135
           DD  + +   + +   +  + E ++   LL   AD  D     +E+  G GG E+  +A 
Sbjct: 75  DDPEMKEMAREEMAAAEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTGGDEAALFAG 134

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMYT++ E + +K       +G   G K     + G   YG LK E GVHR+ R+  
Sbjct: 135 DLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESGVHRVQRVPA 194

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            ++  R HTS +++ V P   +  ++EI+E + + DT+R+SGAGGQ+VN  +S VR  ++
Sbjct: 195 TETQGRVHTSAATVAVLPEAQE-FDVEINEGEIKWDTFRSSGAGGQNVNKVESGVRARYL 253

Query: 256 ---P-TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
              P TG    ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    KT + 
Sbjct: 254 WKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIANRRKTMVS 311

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            G    +IR+Y   P   + D R      +    +DG++ D
Sbjct: 312 TGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQD 351


>gi|300727227|ref|ZP_07060643.1| peptide chain release factor 1 [Prevotella bryantii B14]
 gi|299775465|gb|EFI72059.1| peptide chain release factor 1 [Prevotella bryantii B14]
          Length = 370

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 25/318 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+     ++ IKE +D L +  +  + E+A EE     L E ++ LQ  KLE E K
Sbjct: 50  IMDARKRYIACLNSIKEAKDILANESDPDMKEMAREE-----LSE-NEALQP-KLEEEIK 102

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
               +     D+ +  +E+ AGAGG E+  +A  L  MY ++ +KR +        +G  
Sbjct: 103 -IALVPKDPEDAKNVQMEIRAGAGGDEAALFAGDLFNMYKKYCDKRGWTLSITSTSEGAV 161

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     I G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 162 GGFKEIDCAISGDNVYGVLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHKNKA 274
           I+E D + DT+R+SGAGGQ+VN  +S VR+ +    P TG    ++++C + R Q KNK 
Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEIEEILIECTETRDQPKNKE 280

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A + L   +Y+ E QK   + +I    K+ +  G    +IR+Y   P   V D R    
Sbjct: 281 RALSRLYTYIYDHEHQKY--LDDISSRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYT 337

Query: 332 KTSPSDVLDGDLDDFMKA 349
                  L+GD+ D + A
Sbjct: 338 THDLQGFLNGDIQDMIDA 355


>gi|255641350|gb|ACU20952.1| unknown [Glycine max]
          Length = 230

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 132/220 (60%), Gaps = 10/220 (4%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R++E+  +K   +     E+ G K+  + IKG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P  D+ +E+ I   D  + T R+ GAGGQ+VN  ++A+ + H PTG+
Sbjct: 61  GRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ER+Q KN+ +A+ +LRAKLYE+++  RE+  ++    K ++G G    +IR+Y 
Sbjct: 120 RIFCTEERTQLKNRNRAFQLLRAKLYEIKV--REQQESLRNQRKLQVGTGARSEKIRTYN 177

Query: 317 LQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +  ++    L+ N E TS    LDGD++D +++ + +++
Sbjct: 178 YKDNRVTDHRLKINYELTS---FLDGDIEDAVQSCVTMEQ 214


>gi|56203457|emb|CAI18896.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 164

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 1/128 (0%)

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           + G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I +
Sbjct: 38  QGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INL 96

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LR
Sbjct: 97  VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLR 156

Query: 282 AKLYELEL 289
           AKLY + L
Sbjct: 157 AKLYSMHL 164


>gi|303237122|ref|ZP_07323692.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
 gi|302482509|gb|EFL45534.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
          Length = 370

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 129/249 (51%), Gaps = 17/249 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AGAGG E+  +A  +  MY R+ +K+ +      + +G   G K     +
Sbjct: 112 DDKNVQMEIRAGAGGDEAALFAGDIFNMYKRYCDKKGWNLSITSVSEGTVGGFKEIDFAV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   D+  R  TS +++ V P   D  E+ I+E D + DT
Sbjct: 172 AGTGVYGILKYESGVHRVQRVPSTDTQGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNKAQAWNMLRAK 283
           +R+SGAGGQ+VN  +S VR+ + P     TG    ++++C + R Q KNK +A + LR  
Sbjct: 231 FRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTF 289

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +Y+ E QK   + +I    K+ +  G    +IR+Y   P   V D R           ++
Sbjct: 290 IYDREHQKY--VNDIASRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLPGFMN 346

Query: 341 GDLDDFMKA 349
           GD+ D + A
Sbjct: 347 GDIQDMIDA 355


>gi|282859526|ref|ZP_06268631.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
 gi|282587754|gb|EFB92954.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
          Length = 370

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 164/316 (51%), Gaps = 21/316 (6%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+     +S IKE +D L +  +  + E+A EE     L E ++ LQ  KLE E K
Sbjct: 50  IMDARKRYIACLSTIKEAKDILANESDPDMKEMAREE-----LSE-NETLQP-KLEEEIK 102

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                   E D+ +  +EV AG GG E+  +A  +  MY R+ +K+ +     ++++G  
Sbjct: 103 ILLVPKDPE-DAKNVQMEVRAGTGGDEAALFAGDIFNMYKRFCDKKGWTLSVTDVNEGAV 161

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     + G   YG LK E GVHR+ R+   D+  R  TS +++ V P   D  E+ 
Sbjct: 162 GGFKEIDFAVSGDGVYGILKYESGVHRVQRVPSTDTQGRMQTSAATVAVLPEA-DRFEVN 220

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHKNKA 274
           I+E D + DT+R+SGAGGQ+VN  +S VR+ +    P TG    ++++C + R Q KNK 
Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280

Query: 275 QAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           +A + LR  +Y+ E QK  ++IAN  +S  +      +IR+Y   P   V D R      
Sbjct: 281 RALSRLRTFIYDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTH 339

Query: 334 SPSDVLDGDLDDFMKA 349
                ++G++ + + A
Sbjct: 340 DLPGFMNGNIQEMIDA 355


>gi|255721217|ref|XP_002545543.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240136032|gb|EER35585.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 390

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 15/228 (6%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY------LEVHAGAGG 127
           EL    DD  + +E  + L+ I  EVE  +  S LS +      Y      +E+  G GG
Sbjct: 99  ELVNITDDPDLRKEAQEELETIAPEVE--KLVSQLSVKLRPPVKYAEKGCMIELRPGVGG 156

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   LL MY  +A +  +K++ +         +  A L I    +Y  ++ E GV
Sbjct: 157 NEASLFTGDLLNMYMGFASEMNWKSKIISEGRNASGFLNEAILCIDTLGSYDIMRHESGV 216

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-------SDCRIDTYRASGAGG 240
           HR+ RI   ++  R HTS +++ V P + +  E  + E        + RIDT RASG GG
Sbjct: 217 HRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKEDERVFAPGEVRIDTMRASGKGG 276

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           QHVNTTDSAVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E
Sbjct: 277 QHVNTTDSAVRLVHIPTGMIVYQQDERSQPMNKAKAFAVLRSRLAQKE 324


>gi|212545056|ref|XP_002152682.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
 gi|210065651|gb|EEA19745.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
          Length = 421

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 129/249 (51%), Gaps = 33/249 (13%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA----GIKSATLLIKG 174
           LE+  GAGG E+  +A  LLRMY  +  ++  +T  ++  D EEA     +  A + I+ 
Sbjct: 148 LEIRPGAGGDEAGLFAYELLRMYQNFCSRKGLRTSIVK-QDMEEAISNDRLSEAVVEIET 206

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS------IEIEISESDC 228
           P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P   +S      +  E   SD 
Sbjct: 207 PGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPNFPESGANEENLNFEDPNSDY 266

Query: 229 RIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            ++         RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQH N+ +AW +LR
Sbjct: 267 YVNPQEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGLTVSMQDSRSQHANRKKAWQLLR 326

Query: 282 AKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           AKL E   +         +R  +  +      ++G G ++R+Y     +   D R+ I  
Sbjct: 327 AKLAERRREAREEEMVKLRRGAMGGVA-----KMGRGDKVRTYNFSQSRCT-DHRSGITV 380

Query: 333 TSPSDVLDG 341
                VLDG
Sbjct: 381 HDLDSVLDG 389


>gi|260911915|ref|ZP_05918480.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633938|gb|EEX52063.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 370

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 23/317 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +M  R+     ++ I E +D L +     E   E  D +  + +++  +R KLE E K  
Sbjct: 50  IMNARKRYVACLNSIAEAKDILAN-----ETDAEMKDMAREELSTNEAERPKLEEEIK-- 102

Query: 105 ESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
             LL    D  DA    +E+ AG GG E+  +A  L  MY R+ + + +        +G 
Sbjct: 103 --LLLVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFGMYKRYCDSKGWNLSVTASSEGA 160

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     + G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+
Sbjct: 161 VGGFKEIDFAVSGDNVYGILKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 219

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHKNK 273
            I+E D + DT+R+SGAGGQ+VN  +S VR+ +    P TG    ++++C + R Q KNK
Sbjct: 220 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGETEEILIECTETRDQPKNK 279

Query: 274 AQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
            +A + LR  +Y+ E QK  ++IAN  +S  +      +IR+Y   P   V D R     
Sbjct: 280 ERALSRLRTFIYDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTT 338

Query: 333 TSPSDVLDGDLDDFMKA 349
                 + GD+   + A
Sbjct: 339 HDLQGFIGGDIQAMIDA 355


>gi|148243244|ref|YP_001228401.1| peptide chain release factor 1 [Synechococcus sp. RCC307]
 gi|166223614|sp|A5GVY9|RF1_SYNR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147851554|emb|CAK29048.1| Peptide chain release factor 1 [Synechococcus sp. RCC307]
          Length = 364

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 134/250 (53%), Gaps = 16/250 (6%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L S   D     LE+ AGAGG E+  WA  L RMY R A+   ++   +   + E  G K
Sbjct: 106 LPSDPRDERSVMLEIRAGAGGDEACLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFK 165

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              L I+G   +  LK E GVHR+ R+   +S  R HTS +++ V P   D ++++I   
Sbjct: 166 ELILAIRGDAVFSQLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVDVQIDPK 224

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  I T R+ GAGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKL  
Sbjct: 225 DLDISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLA 284

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN---IEKTSPSD-VL 339
            E ++     +   + + ++G G    +IR+Y        KD RT    + K  P + VL
Sbjct: 285 KEEEEAAAAESS--ARRAQVGSGDRSEKIRTY------NYKDNRTTDHRLGKNFPLETVL 336

Query: 340 DGDLDDFMKA 349
           +G L D ++A
Sbjct: 337 NGQLSDLIEA 346


>gi|281420644|ref|ZP_06251643.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
 gi|281405417|gb|EFB36097.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
          Length = 369

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 161/318 (50%), Gaps = 25/318 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+   N ++ IKE +D L +  +  + E+A EE     L E ++ LQ  KLE E K
Sbjct: 49  IMDARKRYINCLNSIKEAKDILANESDPEMKEMAREE-----LNE-NEALQP-KLEEEIK 101

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
               +     D+ +  +E+  GAGG E+  +A  L  MY ++ E + +      + +G  
Sbjct: 102 -IALVPKDPEDAKNVQMEIRGGAGGDEAALFAGDLFNMYKKYCESKGWTVSVTSVSEGAV 160

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     + G + YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 161 GGYKEIDFAVSGTDVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 219

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK 
Sbjct: 220 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 279

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A + L   +++ E QK   + +I    K+ +  G    +IR+Y   P   V D R    
Sbjct: 280 RALSRLYTFIHDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYT 336

Query: 332 KTSPSDVLDGDLDDFMKA 349
               +  L GD+ D + A
Sbjct: 337 THDLNGFLAGDIQDMIDA 354


>gi|171693921|ref|XP_001911885.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946909|emb|CAP73713.1| unnamed protein product [Podospora anserina S mat+]
          Length = 431

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 23/190 (12%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI----------HDGEEAGIKSA 168
           +EV  G GGTE + +A+ + +MY  +   + F+T+ ++            DGE A ++ A
Sbjct: 142 IEVVPGPGGTEGRFFADSVFKMYQAYCANKGFRTKVVQYLAADSTGEKGGDGETA-LQEA 200

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-----EI 223
            L +    AY   +GE G+HR+ R+   + + R HTS  ++WV P   ++        + 
Sbjct: 201 VLEVMEEGAYAHFRGEAGMHRVQRVPATEKSGRTHTSAVAVWVLPSFAENATASDGDWDN 260

Query: 224 SESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            ESD  ID         RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQH N+A A
Sbjct: 261 PESDFYIDPAEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGITVSMQDSRSQHTNRADA 320

Query: 277 WNMLRAKLYE 286
           W +LR+++ +
Sbjct: 321 WRLLRSRIAQ 330


>gi|322704975|gb|EFY96565.1| putative translation releasing factor RF-1 [Metarhizium anisopliae
           ARSEF 23]
          Length = 415

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 31/262 (11%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168
           +E   G GG E + + + L +MY     +R ++   L+    + AG          ++ A
Sbjct: 130 IEFRPGPGGLEGRYFTDSLFKMYKALCARRGYRANVLKYEMADAAGDQSSSAGENPVQEA 189

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------------- 215
            L I+   AY   + E G+HR+ RI   +S  R HTS  ++WV P               
Sbjct: 190 ILEIQDQGAYDLFRSEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPEGGSSGGGGEAD 249

Query: 216 --DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D   +  ++  + R++T RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+
Sbjct: 250 ADDPESDFYVNPQEVRVETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNR 309

Query: 274 AQAWNMLRAKLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
             AW +LR+++     + R  E A +  S  ++ +I  G +IR+Y         D R  +
Sbjct: 310 EDAWKLLRSRIAGQRAELRMHEAARLRNSVLAQAQITRGDKIRTYNYN-QDRCTDHRAGL 368

Query: 331 EKTSPSDVLDGD--LDDFMKAT 350
           +  +  DVLDG   LD  M A 
Sbjct: 369 DVHNLPDVLDGGETLDRVMDAA 390


>gi|73667063|ref|YP_303079.1| class I peptide chain release factor domain-containing protein
           [Ehrlichia canis str. Jake]
 gi|72394204|gb|AAZ68481.1| Class I peptide chain release factor domain [Ehrlichia canis str.
           Jake]
          Length = 173

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 105/153 (68%), Gaps = 9/153 (5%)

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHR+ R+   +++ R +TS +++ V P +++ ++++I E D RID YR+SG GG
Sbjct: 1   MKFESGVHRVQRVPETEASGRLYTSAATVAVLPEIEE-VDLKIDEKDLRIDVYRSSGPGG 59

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVRITHIP+G+VV  + E+SQHKNK  A  +LRA+LY LE QKR+  + I +
Sbjct: 60  QSVNTTDSAVRITHIPSGIVVIQRDEKSQHKNK--ALKVLRARLYNLEKQKRD--SEISQ 115

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
             K++IG G    +IR+Y   P   + D R N+
Sbjct: 116 MRKSQIGSGDRSERIRTYNF-PQSRITDHRINL 147


>gi|325278153|ref|ZP_08143661.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096712|gb|EGB95050.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 141

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 94/140 (67%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D   + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELEGLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLV 191
           IKG  A+GWL+ E GVHRLV
Sbjct: 122 IKGEYAFGWLRTEIGVHRLV 141


>gi|322699423|gb|EFY91185.1| putative translation releasing factor RF-1 [Metarhizium acridum
           CQMa 102]
          Length = 800

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 28/259 (10%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168
           +E   G GG E + + + L +MY     +R ++   L+    + AG          ++ A
Sbjct: 520 IEFRPGPGGLEGRYFTDSLFKMYKALCTRRGYRANVLKYEMADAAGDQSSSAGENPVQEA 579

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------- 219
            L I+   AY   + E G+HR+ RI   +S  R HTS  ++WV P   +S          
Sbjct: 580 ILEIQDQGAYDMFRSEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESSSGGEADADD 639

Query: 220 ---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
              +  ++  + +++T RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+  A
Sbjct: 640 PESDFYVNPQEVKVETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDA 699

Query: 277 WNMLRAKLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           W +LR+++     + R  E A +  S  ++T+I  G +IR+Y         D R  ++  
Sbjct: 700 WKLLRSRIASQRAELRMHEAARLRNSVLAQTQITRGDKIRTYNYN-QDRCTDHRAGLDVH 758

Query: 334 SPSDVLDGD--LDDFMKAT 350
           +  DVLDG   LD  M A 
Sbjct: 759 NLPDVLDGGETLDRVMDAA 777


>gi|116335021|ref|YP_802516.1| peptide chain release factor B [Candidatus Carsonella ruddii PV]
 gi|116235302|dbj|BAF35150.1| peptide chain release factor B [Candidatus Carsonella ruddii PV]
          Length = 270

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 103/177 (58%), Gaps = 2/177 (1%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           L+ + ++ + ++E+ +  GG ++ D     L  Y +W  K KF  E + + +    G K 
Sbjct: 40  LNIKFNNLNCFVEIISNQGGIDTHDLNKFFLNFYYKWLLKNKFNVEIINL-EQSPYGYKK 98

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           + LLI    ++   K E G+HR++R +P  S+ +  TS+ ++ + P + +++   I+++D
Sbjct: 99  SLLLINNFFSFFLFKNESGLHRIIRKNPLISSKKIQTSYLNLNIVPKIINNVNF-INKND 157

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             I+ YR+ G+GGQHVNTT+SA+RI H PT +VV  Q ERSQ  NK  A   L  KL
Sbjct: 158 LIIENYRSKGSGGQHVNTTNSAIRIVHKPTNIVVTSQSERSQMLNKKFAMQTLEYKL 214


>gi|288928094|ref|ZP_06421941.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330928|gb|EFC69512.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 370

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 159/319 (49%), Gaps = 27/319 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+     ++ I E +D L +  +  + E+A EE        +++  +R KLE E K
Sbjct: 50  IMNARKRYVACLNSIAEAKDILANESDAEMKEMAREE-------LSANETERPKLEEEIK 102

Query: 103 QFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
               LL    D  DA    +E+ AG GG E+  +A  L  MY R+ + + +        +
Sbjct: 103 ----LLLVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFGMYKRFCDSKGWNLSVTASSE 158

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G   G K     + G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  
Sbjct: 159 GAVGGFKEIDFAVSGDNVYGVLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKF 217

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHK 271
           E+ I+E D + DT+R+SGAGGQ+VN  +S VR+ +    P TG    ++++C + R Q K
Sbjct: 218 EVNINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGETEEILIECTETRDQPK 277

Query: 272 NKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK +A + LR  +Y+ E QK  ++IAN  +S  +      +IR+Y   P   V D R   
Sbjct: 278 NKERALSRLRTFIYDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGY 336

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                   + GD+   + A
Sbjct: 337 TTHDLQGFIAGDIQAMIDA 355


>gi|224086914|ref|XP_002308002.1| predicted protein [Populus trichocarpa]
 gi|222853978|gb|EEE91525.1| predicted protein [Populus trichocarpa]
          Length = 374

 Score =  129 bits (325), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 27/264 (10%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   LL G  D   A + + AG+ G   + W   LL MY +WAEK  +K   +E H    
Sbjct: 123 EMSRLLKGPYDKQGACVVIRAGSKGLNHEIWKEELLNMYVKWAEKLGYKGRLVEKHTSMH 182

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------- 215
            GI+SAT+  +   AYG+L GE+G+H   +I+  + +     + + + V P+        
Sbjct: 183 GGIESATIEFEFECAYGYLSGERGIHH--KINSQNGSVHHEVTTACVDVVPLFLGTGFDF 240

Query: 216 ---DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
              D+ + +  S S  R    R           T+  V + HIPTG+ VQ   ERS   N
Sbjct: 241 QIDDEELIVSCSPSLLRDRKSR-----------TELTVCLQHIPTGISVQSSGERSHFAN 289

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEI--GWGRQIRSYVLQPYQMVKDLRTNI 330
           K +A N L+AKL  L + + +++ ++    + +I   W ++ R YV QPY++V+D+RT I
Sbjct: 290 KVKAHNRLKAKL--LVIAEEQKVCDVSSIRRADIVDEWQKETRRYVSQPYKLVQDVRTGI 347

Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354
           E    + +LDG+++  + A + I+
Sbjct: 348 ELPDLNSILDGNINTLIGAHINIR 371


>gi|238506130|ref|XP_002384267.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
 gi|220690381|gb|EED46731.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
          Length = 267

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 121/223 (54%), Gaps = 22/223 (9%)

Query: 140 MYTRWAEKRKFKTEA--LEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R F++    LE+ DG  E  +  A + ++   AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCSRRGFRSNVIKLEVGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYP-------VVDDSIEIEISESDCRIDT-------YRASGAGGQH 242
           ++  R HTS  S+ V P        +D+++  +   SD  +D         RA GAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298
           VN T+SA+R+TH+PTG+VV  Q  RSQH N+ +AW +LRA+L E   + RE    E+   
Sbjct: 121 VNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                  +G G +IR+Y     +   D R++I   + +DVLDG
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSR-CTDHRSSITIHNLNDVLDG 222


>gi|170595371|ref|XP_001902354.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
 gi|158590015|gb|EDP28797.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
          Length = 382

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 22/278 (7%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           HL+   +   +  D+L + L  L+L L+E +   +QE    + ++  E   ++ +S+++ 
Sbjct: 53  HLETVTTLAHKFYDKL-EMLTQLDLLLKEGNDPEIQE----IAKLDSEQLTEELDSVVNK 107

Query: 111 EADS----------NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             D           N+  LE+  G GG E+  +A+ L +MY  +A+  K+K    ++   
Sbjct: 108 LTDVVIPVTEYDLLNNCQLEITPGVGGVEASLFASELAQMYHNYAQFMKWKWTPYQMDVS 167

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
              GI+SA + ++G  A+  L+ E GVHR+ R  P    +R HTS S + V P   D IE
Sbjct: 168 PSGGIRSAVVFVRGNGAFRTLRYEAGVHRVQRF-PVTDKTRMHTSTSVVAVLPE-PDKIE 225

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             ++ +D +++T RASG GGQ+VN   +AVR+TH  TGV V C  ER+Q+ N   A+  L
Sbjct: 226 ACVTPADVKVETMRASGPGGQNVNQRSTAVRLTHRETGVTVHCTDERTQYSNMEIAYKRL 285

Query: 281 RAKLYELELQKREEIANIGESSKTEIGW---GRQIRSY 315
            A L + +L + ++      S K +IG      ++R+Y
Sbjct: 286 AAILLQRKLDETQK--QYSSSRKLQIGTKARAEKVRTY 321


>gi|282877960|ref|ZP_06286769.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
 gi|281299961|gb|EFA92321.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
          Length = 370

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 11/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E+  +A  L  MY  + + + +      +++G   G K     +
Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ I+E D + DT
Sbjct: 172 SGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DQFEVNINEGDIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK +A + LR  +
Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           Y+ E QK  ++IAN  +S  +      +IR+Y   P   V D R           ++GD+
Sbjct: 291 YDREHQKYIDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVNGDI 349

Query: 344 DDFMKA 349
              + A
Sbjct: 350 QAMIDA 355


>gi|194705206|gb|ACF86687.1| unknown [Zea mays]
 gi|195648693|gb|ACG43814.1| hypothetical protein [Zea mays]
          Length = 230

 Score =  129 bits (323), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 129/220 (58%), Gaps = 10/220 (4%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E+  +K + +   + E  G K+  + +KG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P  D+ +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 61  GRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ERSQ +N+ +A+ +LRAKLYE++L  RE+  ++    K ++G G    +IR+Y 
Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKL--REQQESLRNQRKLQVGTGARSEKIRTYN 177

Query: 317 LQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +  ++    L+ N E TS    L GD++  +++   +++
Sbjct: 178 YKDNRVTDHRLKMNFELTS---FLLGDIESAIQSCATMEQ 214


>gi|288925782|ref|ZP_06419713.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315608268|ref|ZP_07883258.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
 gi|288337437|gb|EFC75792.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315250049|gb|EFU30048.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
          Length = 370

 Score =  129 bits (323), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 25/318 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+     ++ IKE +D L +  +  + E+A EE        T+++LQ  KLE E K
Sbjct: 50  IMDVRKRYIACLNAIKESKDILANESDADMKEMAREE------LATNEDLQP-KLEEEIK 102

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
               +     D+ +  +E+ AGAGG E+  +A  L  MY ++ + + +      + +G  
Sbjct: 103 -IALVPKDPEDAKNVQMEIRAGAGGDEAALFAGDLFNMYKKYCDSKGWNLSVTSVSEGAV 161

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     + G + YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 162 GGYKEIDFAVSGVDVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274
           I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK 
Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A + L   +++ E QK   I +I    K+ +  G    +IR+Y   P   V D R    
Sbjct: 281 RALSRLYTFIHDREHQKY--IDDIASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYT 337

Query: 332 KTSPSDVLDGDLDDFMKA 349
                  + GD+ D + A
Sbjct: 338 THDLQGFMGGDIQDMIDA 355


>gi|330951103|gb|EGH51363.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 243

 Score =  129 bits (323), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 16/204 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+R +  L+ A + +K+       +  + E+A+EE     ++ET   L  ++LE + ++ 
Sbjct: 55  LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101

Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             LL  +  D  + +LE+ AG GG E+  ++  L RMY+R+AE+R ++ E L  ++GE  
Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K     ++G + YG LK E G HR+ R+   +S  R HTS  ++ V P  D+   IEI
Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219

Query: 224 SESDCRIDTYRASGAGGQHVNTTD 247
           + +D R+DTYR+SGAGGQHVN TD
Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTD 243


>gi|323345650|ref|ZP_08085873.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
 gi|323093764|gb|EFZ36342.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
          Length = 370

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 11/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +A  L  MY ++ + + +        +G   G K     +
Sbjct: 112 DEKNVQMEIRAGTGGDEAALFAGDLFNMYKKYCDSKGWTLSVTSESEGAVGGFKEIDFAV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ I+E D + DT
Sbjct: 172 SGANVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK +A + LR  +
Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWRNPNTGETEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           Y+ E QK  ++IAN  +S  +      +IR+Y   P   V D R           L G++
Sbjct: 291 YDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFLGGNI 349

Query: 344 DDFMKA 349
            + + A
Sbjct: 350 QEMIDA 355


>gi|261880577|ref|ZP_06007004.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
 gi|270332696|gb|EFA43482.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
          Length = 369

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 27/317 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQR-IKLEVEY 101
           +M  R+   + ++ IKE +D + +  +  + E+A EE   SI +     L+  IK+ +  
Sbjct: 49  IMDARKRYIDCLNAIKESKDIMTNESDADMKEMAREE--LSINESLQPQLEEEIKMALVP 106

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           K  E       D+ +  +E+ AGAGG E+  +A  L  MY ++ + + +      + +G 
Sbjct: 107 KDPE-------DAKNVQMEIRAGAGGDEAALFAGDLFNMYKKFCDTKGWSVSVTSVSEGS 159

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K     + G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+
Sbjct: 160 VGGYKEIDFAVSGDNVYGVLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 218

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNK 273
            I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK
Sbjct: 219 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNK 278

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A + L   +Y+ E  K   + +I    K+ +  G    +IR+Y   P   + D R   
Sbjct: 279 ERALSRLYTYIYDHERSKY--LNDISSRRKSLVSTGDRSAKIRTYNF-PQGRITDHRIGY 335

Query: 331 EKTSPSDVLDGDLDDFM 347
                   L GD+ D +
Sbjct: 336 TTHDLQGFLGGDIQDMI 352


>gi|304382675|ref|ZP_07365169.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
 gi|304336300|gb|EFM02542.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
          Length = 370

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 27/319 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+   N I+ I+E +D L +  +  L E+A EE     LQ +++ LQ  +LE E K
Sbjct: 50  IMDARRRYINCINAIQEAKDILNNETDADLKEMAREE-----LQ-SNETLQP-QLEEEIK 102

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
               +     D+ +  +E+ AG GG E+  +A  L  MY ++ + + +      + +G  
Sbjct: 103 -IALVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFNMYKKFCDSKGWTLSITSVSEGAV 161

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     + G + YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 162 GGFKEIDFAVSGTDVYGILKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNK 273
           I+E D + DT+R+SGAGGQ+VN  +S VR+ + P     TG    ++++C + R Q KNK
Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGETEEILIECTETRDQPKNK 279

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A + LR  +Y+ E QK   + +I    K+ +  G    +IR+Y  Q  + V D R   
Sbjct: 280 ERALSRLRTFIYDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNYQQGR-VTDHRIGF 336

Query: 331 EKTSPSDVLDGDLDDFMKA 349
                   L G++ + + A
Sbjct: 337 TTHDLQGFLAGNIQEMIDA 355


>gi|282879521|ref|ZP_06288252.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
 gi|281306469|gb|EFA98498.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
          Length = 370

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 128/246 (52%), Gaps = 11/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E+  +A  L  MY  + + + +      +++G   G K     +
Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAV 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ I+E D + DT
Sbjct: 172 SGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DQFEVNINEGDIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK +A + LR  +
Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFI 290

Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           Y+ E QK  ++IAN  +S  +      +IR+Y   P   V D R           + GD+
Sbjct: 291 YDREHQKYIDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDI 349

Query: 344 DDFMKA 349
              + A
Sbjct: 350 QGVIDA 355


>gi|262383596|ref|ZP_06076732.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
 gi|262294494|gb|EEY82426.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
          Length = 369

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  G GG E+  +A  L RMY ++ E + +K       +G   G K     +
Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P  D+  ++EI+E + + DT
Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229

Query: 233 YRASGAGGQHVNTTDSAVR--------ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR        IT +   ++++C + R Q KNK +A   LR+ +
Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFI 289

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   + +I    KT +  G    +IR+Y   P   + D R N    + S  +DG
Sbjct: 290 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346

Query: 342 DLDDFM 347
           ++ D +
Sbjct: 347 EIQDCL 352


>gi|317502848|ref|ZP_07960949.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
 gi|315666037|gb|EFV05603.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
          Length = 370

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 165/321 (51%), Gaps = 31/321 (9%)

Query: 45  LMRERQHLDNAISFIKEIQDRLC--DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+   + +  IKE ++ L   D+  + E+A EE     LQE +++LQ  KLE E K
Sbjct: 50  IMNARKRYISCLDSIKEAKNILANEDDADMKEMAREE-----LQE-NESLQP-KLEEEIK 102

Query: 103 QFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
               LL    D  DA    +E+ AG GG E+  +A  L  MY ++ + + +     ++ +
Sbjct: 103 ----LLLVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFNMYKKYCDMKGWILSITDVSE 158

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G   G K     I G + YG +K E GVHR+ R+   +SN R  TS +++ V P   D  
Sbjct: 159 GAVGGYKEIDFAISGTDVYGIMKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKF 217

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHK 271
           E+ I+E D + DT+R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q K
Sbjct: 218 EVNINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPK 277

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328
           NK +A + L   +++ E QK   + +I +  K+ +  G    +IR+Y   P   V D R 
Sbjct: 278 NKERALSRLYTFIHDREHQKY--VDDIADRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRI 334

Query: 329 NIEKTSPSDVLDGDLDDFMKA 349
                     L+G++ D + A
Sbjct: 335 GYTTHDLQGFLNGNIQDMIDA 355


>gi|150008712|ref|YP_001303455.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|255014510|ref|ZP_05286636.1| peptide chain release factor 1 [Bacteroides sp. 2_1_7]
 gi|256841252|ref|ZP_05546759.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298375991|ref|ZP_06985947.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|301311522|ref|ZP_07217449.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
 gi|166223582|sp|A6LDR9|RF1_PARD8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149937136|gb|ABR43833.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|256737095|gb|EEU50422.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298267028|gb|EFI08685.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|300830608|gb|EFK61251.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
          Length = 369

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 15/246 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A +E+  G GG E+  +A  L RMY ++ E + +K       +G   G K     +
Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTV 170

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   ++  R HTS +++ V P  D+  ++EI+E + + DT
Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229

Query: 233 YRASGAGGQHVNTTDSAVR--------ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+ GAGGQ+VN  +S VR        IT +   ++++C + R Q KNK +A   LR+ +
Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFI 289

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y+ E QK   + +I    KT +  G    +IR+Y   P   + D R N    + S  +DG
Sbjct: 290 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346

Query: 342 DLDDFM 347
           ++ D +
Sbjct: 347 EIQDCL 352


>gi|207109382|ref|ZP_03243544.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 196

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 114/200 (57%), Gaps = 12/200 (6%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117
           IKE ++ L D   L ELA EE    IL+     +Q+  LE   KQ   L+  +  D  + 
Sbjct: 7   IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 56

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG   
Sbjct: 57  YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 116

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E G HR+ R+   +S  R HTS  ++ + P VDD +E+ I+ SD +I+ +RA G
Sbjct: 117 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 175

Query: 238 AGGQHVNTTDSAVRITHIPT 257
            GGQ VNTTDSAVRITH+PT
Sbjct: 176 HGGQCVNTTDSAVRITHLPT 195


>gi|241954572|ref|XP_002420007.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223643348|emb|CAX42223.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 392

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 24/240 (10%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----------GEADSNDAYLEVH 122
           +EL    DD  + +E  + L+ I +     Q E L+S            AD     +E+ 
Sbjct: 99  IELTEITDDPGLYKEAQEELKSIVI----PQIEKLVSELTVKLRPPVKYADKG-CIIELR 153

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+  +   LL MY  +A +  +K + +         I  A L I    +Y  ++
Sbjct: 154 PGVGGNEASLFTGDLLNMYINFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMR 213

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-------SESDCRIDTYRA 235
            E GVHR+ RI   ++  R HTS S++ V P + +  E  +       +  + RIDT RA
Sbjct: 214 HESGVHRVQRIPETETKGRVHTSTSAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRA 273

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQHVNTTDSAVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E  + EEI
Sbjct: 274 GGKGGQHVNTTDSAVRLVHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKE--QEEEI 331


>gi|302901381|ref|XP_003048424.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
 gi|256729357|gb|EEU42711.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
          Length = 412

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 34/284 (11%)

Query: 91  NLQRIKLEVEYKQFESL---LSGEADSNDAY------LEVHAGAGGTESQDWANMLLRMY 141
           ++ R +LE E  + ESL   LS        +      +E   G GG E + + + L +MY
Sbjct: 92  SIARDELESETGKLESLARNLSASLTPRHPFADFPCMIEFRPGPGGLEGRYFTDTLFKMY 151

Query: 142 TRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLV 191
                ++ ++   ++    + AG          ++ A L I+   A+   + E G+HR+ 
Sbjct: 152 KALCMRKGYRHSVMKYEFADTAGDSSSSAGENPLQEAVLEIQDQGAFDLFRSEAGMHRVQ 211

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDS----IEIEISESD-------CRIDTYRASGAGG 240
           RI   +S  R HTS  ++WV P   +S    ++ E  ESD        +I+  RA GAGG
Sbjct: 212 RIPSTESKGRVHTSAVAVWVLPSFPESGAGSVDFEDPESDFYVNPQDVKIEAMRARGAGG 271

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SA+R+TH+PTG  V  Q  RSQ +N+ +AW M+RA++ +   + REE A    
Sbjct: 272 QHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNRDEAWKMMRARIADQRREAREEEAARLR 331

Query: 301 S---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +   SKT+I  G +IR+Y         D R  I+     +VL+G
Sbjct: 332 NSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHDLPNVLEG 374


>gi|60279679|ref|NP_001012512.1| peptide chain release factor 1, mitochondrial [Danio rerio]
 gi|58701973|gb|AAH90173.1| Zgc:113104 [Danio rerio]
          Length = 235

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 111/188 (59%), Gaps = 15/188 (7%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           +  MY  +A  + +  E       E  G+  A++ + G   + WLK E G HR+ RI   
Sbjct: 1   MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60

Query: 197 DSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
             +SR    HT   ++ V P +++ ++I+I+  D RIDT+R+ GAGGQHVNTTDSAVR+ 
Sbjct: 61  GLSSRMQRIHTGTMTVIVLPQMEE-VDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLV 119

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIAN-----IGESSKTEIG 307
           H+PTG V +CQQ RSQ KN+  A  +LRA+L++  + Q+RE+        +G  +++E  
Sbjct: 120 HLPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQTHTARRLQVGTRAQSE-- 177

Query: 308 WGRQIRSY 315
              +IR+Y
Sbjct: 178 ---RIRTY 182


>gi|296775660|gb|ADH42937.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 181

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/155 (45%), Positives = 100/155 (64%), Gaps = 7/155 (4%)

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS +++ + P  +D ++I+I++SD RID +R+SG GGQ VNTTDSAVRITH P+G+VV 
Sbjct: 21  HTSAATVAILPEAED-VDIKINDSDLRIDVFRSSGPGGQSVNTTDSAVRITHGPSGIVVT 79

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
            Q E+SQHKNKA+A  +LRA+LYE E  K+E         K++IG G    +IR+Y   P
Sbjct: 80  QQDEKSQHKNKAKALKILRARLYESEKLKKER--QRSSERKSQIGTGDRSERIRTYNF-P 136

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              V D R N      +D L+G++ + M   L +K
Sbjct: 137 QGRVTDHRINFTLHKLTDFLNGEIHEEMNENLRLK 171


>gi|121704606|ref|XP_001270566.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
 gi|119398712|gb|EAW09140.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
          Length = 251

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 24/231 (10%)

Query: 140 MYTRWAEKRKFKTEA--LEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R F +    L++ DG  E  +  A + I    AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCSRRGFPSHVIKLDVQDGPSEDRLSEAVIEIDAGGAYDLLRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRIDTYRASGAGGQH 242
           ++  R HTS  S+ V P   D+               +  I   + R +  RASGAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPDTATGAEGALNFDDPNSDYYIDPQEVRTEKMRASGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298
           VN T+SA+R+THIPTG VV  Q  RSQH N+ +AW +LRAKL E   + RE    E+   
Sbjct: 121 VNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRAKLAEARQESREQELVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFM 347
                  +G G +IR+Y     +   D R+ I   +  D+L G   LD  M
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCT-DHRSGITVHNLDDILGGGQGLDTVM 230


>gi|301347896|ref|ZP_07228637.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513180|ref|ZP_07238417.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597157|ref|ZP_07242165.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 239

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 83/132 (62%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L  ++GE  G K     +
Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E G HR+ R+   +S  R HTS  ++ + P +D    +EI+ +D RIDT
Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226

Query: 233 YRASGAGGQHVN 244
           YRASGAGGQH+N
Sbjct: 227 YRASGAGGQHIN 238


>gi|288800098|ref|ZP_06405557.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333346|gb|EFC71825.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 369

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 27/321 (8%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +M  R+     ++ IKE +D L +  +  + E+A EE     LQ     L +++ E+   
Sbjct: 49  IMEARKKYVTCLNVIKEAKDILANETDQDMREIAREE-----LQANEPLLPKLEEEI--- 100

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   +     D+ +  +E+ AG GG E+  +A  L +MY ++ +   +        +G  
Sbjct: 101 KIALVPKDPEDAKNVEVEIRAGTGGDEAALFAGDLFQMYKKYCDSMGWSISITNESEGTM 160

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     + G N YG LK E GVHR+ R+   ++  R HTS +++ V P   D  E+ 
Sbjct: 161 GGFKEIAFSVTGTNVYGILKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 219

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNK 273
           I+E D + DT+R+SGAGGQ+VN  +S VR+ + P     TG    ++++C + R Q KNK
Sbjct: 220 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEVEEILIECTETRDQPKNK 278

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330
            +A + LR  +Y+ E QK   + +I    K+ +  G    +IR+Y   P   V D R   
Sbjct: 279 ERALSRLRTFIYDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGY 335

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
                   + GD+   + A +
Sbjct: 336 TTHDLQGFVGGDIQAMIDALI 356


>gi|312082910|ref|XP_003143641.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
 gi|307761198|gb|EFO20432.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
          Length = 384

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 150/283 (53%), Gaps = 16/283 (5%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS- 109
           HL+   +  +   D+L   L  L++ L+E + + +Q+ +  L   +L VE     + L+ 
Sbjct: 53  HLETVTTLARRFYDKL-GMLTELDMLLKEGNDAEIQKIA-KLDSEQLTVELDSIVNELTD 110

Query: 110 -----GEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
                 E DS N+  LE+  G GG E+  +A+ L  MY  +A+  K+K    ++      
Sbjct: 111 VVIPVTEYDSLNNCQLEIIPGVGGVEASLFASELAEMYHNYAQFMKWKWTPYQVDASPSG 170

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GI+SA + ++G  A+  L+ E GVHR+ R  P    +R HTS S + V P   + IE  +
Sbjct: 171 GIRSAVVFVRGNGAFRALRYEAGVHRVQRF-PVTDKTRMHTSTSVVAVLPE-PEKIEACV 228

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           + +D +++T RASG GGQ+VN   +AVR+TH  TG+ V C  ER+Q+ N   A+  L A 
Sbjct: 229 TPADVKVETMRASGPGGQNVNQRSTAVRLTHRETGIAVHCVDERTQYSNMEIAYKRLAAI 288

Query: 284 LYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMV 323
           L + +L + ++      S K ++G      ++R+Y  +  Q++
Sbjct: 289 LLQRKLDETQK--QYSSSRKLQVGTKARAEKVRTYNFKDDQVI 329


>gi|332825293|ref|XP_003311599.1| PREDICTED: mitochondrial translational release factor 1-like [Pan
           troglodytes]
          Length = 281

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 91/150 (60%), Gaps = 1/150 (0%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           RIDT RASGAGGQHVNTTDSAVRI H+PTG
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTG 269


>gi|294673455|ref|YP_003574071.1| peptide chain release factor 1 [Prevotella ruminicola 23]
 gi|294472502|gb|ADE81891.1| peptide chain release factor 1 [Prevotella ruminicola 23]
          Length = 371

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 129/246 (52%), Gaps = 11/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E+  +A  L +MY  + E + ++     + +G   G K     +
Sbjct: 113 DAKNVEMEIRAGTGGDEAALFAGDLFKMYKNYCESKGWQVSITYVSEGAVGGFKEVDFSV 172

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG LK E GVHR+ R+   +SN R  TS +++ V P   D  E+ ++E + + DT
Sbjct: 173 TGADVYGTLKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKFEVHVNEGEIKWDT 231

Query: 233 YRASGAGGQHVNTTDSAVRITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+SGAGGQ+VN  +S VR+ ++     TG    ++++C + R Q KNK +A + L   +
Sbjct: 232 FRSSGAGGQNVNKVESGVRLRYMWKNPNTGETEEILIECTETRDQPKNKERALSRLYTFI 291

Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           Y+ E QK  ++IAN  +S  +      +IR+Y   P   V D R           L GD+
Sbjct: 292 YDKEHQKYVDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGDI 350

Query: 344 DDFMKA 349
              + A
Sbjct: 351 QAMIDA 356


>gi|119493428|ref|XP_001263904.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
 gi|119412064|gb|EAW22007.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
          Length = 256

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 22/223 (9%)

Query: 140 MYTRWAEKRKFKTEA--LEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R  ++    L++ DG  +  +  A + I    AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCTRRGLRSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD-------CRIDTYRASGAGGQH 242
           ++  R HTS  S+ V P        +D ++  +  +SD        R +  RASGAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPEAGASMDSALNFDDPDSDYYVDPQEVRTEKMRASGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298
           VN T+SA+R+THIPTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE    E+   
Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                  +G G +IR+Y     +   D R+ I   +  +VLDG
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCT-DHRSGITVHNLDNVLDG 222


>gi|302672683|ref|XP_003026029.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
 gi|300099709|gb|EFI91126.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
          Length = 251

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 5/171 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A LE+  G GG E   +   L RMYTR+A +  ++   +   + E  G++   + ++   
Sbjct: 5   ALLELKPGVGGAEGALFCVDLERMYTRYAAEHGWQLTPVNRSETESGGLREVLMEVRKGK 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---ISESDCRIDTY 233
             G    E G HR+ RI   +S+ R HTS +S+ V P+V++            D RI+  
Sbjct: 65  GRGDF--ESGAHRVQRIPATESSGRVHTSTASVLVLPLVEEGTPTTTPLFKMEDVRIEVM 122

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           RA GAGGQHVN T+SAVR+THIPTG+VV  Q ERSQH N+ +A+ +L ++L
Sbjct: 123 RARGAGGQHVNKTESAVRLTHIPTGIVVAMQDERSQHVNRRRAFTVLTSRL 173


>gi|299140684|ref|ZP_07033822.1| peptide chain release factor 1 [Prevotella oris C735]
 gi|298577650|gb|EFI49518.1| peptide chain release factor 1 [Prevotella oris C735]
          Length = 370

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 11/246 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E+  +A  L  MY R+ + + +     ++ +G   G K     I
Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG +K E GVHR+ R+   +SN R  TS +++ V P   D  E+ I+E D + DT
Sbjct: 172 SGTDVYGTMKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK +A + L   +
Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFI 290

Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           ++ E QK  ++IAN  +S  +      +IR+Y   P   V D R           L G++
Sbjct: 291 HDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNI 349

Query: 344 DDFMKA 349
            D + A
Sbjct: 350 QDMIDA 355


>gi|68486252|ref|XP_712983.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
 gi|46434408|gb|EAK93818.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
          Length = 394

 Score =  126 bits (316), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 20/232 (8%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG---------EADSNDAYLEVHA 123
           +EL    DD  + +E  + L+ I +     Q E L+S          +  +    +E+  
Sbjct: 101 IELTEITDDPDLYKEAQEELKSIVI----PQIEKLVSELRVKLRPPVKYANKGCIIELRP 156

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +   LL MY  +A +  +K + +         I  A L I    +Y  ++ 
Sbjct: 157 GVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRH 216

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-------SESDCRIDTYRAS 236
           E GVHR+ RI   ++  R HTS +++ V P + +  E  +       +  + RIDT RA 
Sbjct: 217 ESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAG 276

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G GGQHVNTTDSAVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E
Sbjct: 277 GKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKE 328


>gi|68486191|ref|XP_709944.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|46434441|gb|EAK93850.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|238881487|gb|EEQ45125.1| peptide chain release factor 1, mitochondrial precursor [Candida
           albicans WO-1]
          Length = 394

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 22/233 (9%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----------GEADSNDAYLEVH 122
           +EL    DD  + +E  + L+ I +     Q E L+S            AD     +E+ 
Sbjct: 101 IELTEITDDPDLYKEAQEELKSIVI----PQIEKLVSELRVKLRPPVKYADKG-CIIELR 155

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+  +   LL MY  +A +  +K + +         I  A L I    +Y  ++
Sbjct: 156 PGVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMR 215

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-------SESDCRIDTYRA 235
            E GVHR+ RI   ++  R HTS +++ V P + +  E  +       +  + RIDT RA
Sbjct: 216 HESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRA 275

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            G GGQHVNTTDSAVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E
Sbjct: 276 GGKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKE 328


>gi|326520682|dbj|BAJ92704.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 112/184 (60%), Gaps = 12/184 (6%)

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY R+ E   +K + +   + E+ G K+  + +KG   Y  LK E GVHR+ R+   +
Sbjct: 6   VRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTE 65

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS +++ + P  D+ +++ I   D  +   R+ GAGGQ+VN  ++A+ + H PT
Sbjct: 66  TMGRVHTSTATVAIMPEADE-VDVVIDPKDIELKAARSGGAGGQNVNKVETAIDLIHKPT 124

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKTEIGWGRQ 311
           G+ + C +E+SQ +NK +A+ +LRAKLYE++L++++E      +  +G  +++E     +
Sbjct: 125 GIRIFCTEEKSQLQNKERAFQLLRAKLYEIKLREQQESIRTQRLLQVGTGARSE-----K 179

Query: 312 IRSY 315
           IR+Y
Sbjct: 180 IRTY 183


>gi|121591760|ref|ZP_01678968.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
 gi|121546377|gb|EAX56631.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
          Length = 242

 Score =  125 bits (314), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 5/219 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  + + L +E   L+      +  Q +  ++L+  E   +EDD  + +   D 
Sbjct: 25  DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83

Query: 92  LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           ++  K  +E    E  +L    D ND    +LE+ AGAGG E+  +A  L RMY+R+AEK
Sbjct: 84  IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + ++ E +   + E  G K     + G  AYG LK E G HR+ R+   ++  R HTS  
Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTT
Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTT 242


>gi|71000757|ref|XP_755060.1| mitochondrial translation release factor (RF-1) [Aspergillus
           fumigatus Af293]
 gi|66852697|gb|EAL93022.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus Af293]
 gi|159128074|gb|EDP53189.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus A1163]
          Length = 256

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 117/223 (52%), Gaps = 22/223 (9%)

Query: 140 MYTRWAEKRKFKTEA--LEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R  ++    L++ DG  +  +  A + I    AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCSRRGLQSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD-------CRIDTYRASGAGGQH 242
           ++  R HTS  S+ V P        +D ++  +   SD        R +  RASGAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPEAGPSMDSALNFDDPNSDYYVDPQEVRTEKMRASGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298
           VN T+SA+R+THIPTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE    E+   
Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                  +G G +IR+Y     +   D R+ I   +  +VLDG
Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCT-DHRSGITVHNLDNVLDG 222


>gi|66361428|pdb|1ZBT|A Chain A, Crystal Structure Of Peptide Chain Release Factor 1 (Rf-1)
           (Smu.1085) From Streptococcus Mutans At 2.34 A
           Resolution
          Length = 371

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 11/244 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  LE+   AGG E+  +A  LL  Y ++AE + +K E  E       G+K     +
Sbjct: 121 DDKNIILEIRGAAGGDEAALFAGDLLNXYQKYAENQGWKFEVXEASANGVGGLKEVVAXV 180

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  LK E G HR+ R+   +S  R HTS ++  +     + +E EI   D R+D 
Sbjct: 181 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTS-TATVLVXPEVEEVEYEIDPKDLRVDI 239

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290
           Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   ++ 
Sbjct: 240 YHASGAGGQNVNKVATAVRIIHLPTNIKVEXQEERTQQKNRDKAXKIIRARVADHFAQIA 299

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           + E+ A      K+ +G G    +IR+Y   P   V D R  +       +L G LD+ +
Sbjct: 300 QDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVI 354

Query: 348 KATL 351
            A +
Sbjct: 355 DALI 358


>gi|47218558|emb|CAG10257.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 438

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 39/294 (13%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMY 141
           L+E   ++ +  L +     ++LL  +  DS++  LEV +G   GG   Q +   +  MY
Sbjct: 142 LEEEEGHISQKLLSLRRDLVKALLPADPLDSSNVLLEVVSGRTTGGDICQQFTREVFDMY 201

Query: 142 TRWAEKRKFKTEALEIHDGE------------EAGIKSATLLIKGPNAYGWLKGEQGVHR 189
             +A  + +  E +   + E              G+  A   I G N Y  LK E G HR
Sbjct: 202 QGFASHKNWDFEPVNYTNAEYGCDVRGCCLLLSGGLHHAAARITGENVYRHLKHEGGTHR 261

Query: 190 LVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           + RI     +SR    HT   ++ + P   + +++ +   D RIDT+R+ GAGGQ VNTT
Sbjct: 262 VQRIPEVGLSSRMQRIHTGTMTVIILPQPAE-LDLHVDPKDLRIDTFRSRGAGGQSVNTT 320

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGE 300
           DSAVR+ H+PTG+ V+CQQ RSQ +N+  A   LRA+LY+  L K  +         +G 
Sbjct: 321 DSAVRVVHLPTGIAVECQQSRSQLQNRDTAMRALRARLYQARLGKESQRRLSARRQQVGT 380

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            S++E     +IR+Y       V D RT             D+ +FM+   A++
Sbjct: 381 RSQSE-----RIRTYNFS-QDRVTDHRTGYTAR--------DIKEFMRGGQALQ 420


>gi|281425822|ref|ZP_06256735.1| peptide chain release factor 1 [Prevotella oris F0302]
 gi|281400083|gb|EFB30914.1| peptide chain release factor 1 [Prevotella oris F0302]
          Length = 370

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 128/248 (51%), Gaps = 15/248 (6%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E+  +A  L  MY R+ + + +     ++ +G   G K     I
Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAI 171

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + YG +K E GVHR+ R+   +SN R  TS +++ V P   D  E+ I+E D + DT
Sbjct: 172 SGTDVYGTMKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDT 230

Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284
           +R+SGAGGQ+VN  +S VR+ +      TG    ++++C + R Q KNK +A + L   +
Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFI 290

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           ++ E QK   + +I    K+ +  G    +IR+Y   P   V D R           L G
Sbjct: 291 HDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGG 347

Query: 342 DLDDFMKA 349
           ++ D + A
Sbjct: 348 NIQDMIDA 355


>gi|302759761|ref|XP_002963303.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
 gi|300168571|gb|EFJ35174.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
          Length = 391

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 155/315 (49%), Gaps = 37/315 (11%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFE 105
           +E ++LD ++  IK ++ +  + + L EL  E  +D  + +  S  LQ    EV   Q +
Sbjct: 84  KELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHD 143

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQ--DWANMLLR--MYTRWAEKRKFKTEALEIHDGE 161
            LL  E    D      AG         D  +++ R   Y ++A    ++ E L I   +
Sbjct: 144 VLL--ELIPKDEAARSRAGKCSLMCLMFDMFHLIFRSWRYDKYAANNSWRFEVLSITTTD 201

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K A+  I G   YG LK E GVHR+ R+   +   R HTS +S+ + P  ++ +++
Sbjct: 202 TRGYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-VDV 260

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q  R              
Sbjct: 261 EIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDTR-------------- 306

Query: 282 AKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
             LYELE  +    R E+    IG S ++E     +IR+Y   P   V D R  + + + 
Sbjct: 307 --LYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHRVGVTQHAI 358

Query: 336 SDVLDG-DLDDFMKA 349
             +++G  L+ F+ A
Sbjct: 359 EQIMEGIGLEIFVNA 373


>gi|119568099|gb|EAW47714.1| mitochondrial translational release factor 1-like, isoform CRA_c
           [Homo sapiens]
          Length = 271

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|166795305|ref|NP_001107656.1| peptide chain release factor 1-like, mitochondrial isoform b [Homo
           sapiens]
 gi|15680165|gb|AAH14428.1| MTRF1L protein [Homo sapiens]
 gi|56203459|emb|CAI18898.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|193787809|dbj|BAG53012.1| unnamed protein product [Homo sapiens]
          Length = 271

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|332213667|ref|XP_003255946.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 271

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|114609871|ref|XP_001140771.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 5 [Pan troglodytes]
          Length = 271

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|149003371|ref|ZP_01828260.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758554|gb|EDK65552.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 165

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 2/166 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLV
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLV 164


>gi|237830659|ref|XP_002364627.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211962291|gb|EEA97486.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221507504|gb|EEE33108.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 545

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 130/232 (56%), Gaps = 3/232 (1%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +A   DA LE+ AG GG ++  ++  LL MY  ++  R +    L+I + E+ G + A+ 
Sbjct: 273 QALQGDAVLEIQAGVGGEDAALFSRDLLGMYEAFSLARGWVFRVLDIQETEKGGYRRASA 332

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCR 229
            ++GP+A+  L  E G+HR+ R+ P ++  R  TS +++ V P   +   +I++S    +
Sbjct: 333 QVEGPDAFRLLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPRSGNLEDKIDLSPPTLK 392

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           ID  RASG GGQ VN +++AVRITH PTGV V C + +SQ +NK+ A  +LRA+L +  +
Sbjct: 393 IDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQMENKSLALELLRAQLLQQLM 452

Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
            Q  EE     ++ K       +IR+Y  Q   +V D R  +      + LD
Sbjct: 453 RQASEERGRALDAQKGSKDRSEKIRTYNFQ-RDVVTDHRCRMHVNGVEEFLD 503


>gi|226510582|ref|NP_001146175.1| hypothetical protein LOC100279745 [Zea mays]
 gi|219886065|gb|ACL53407.1| unknown [Zea mays]
          Length = 184

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E+  +K + +   + E  G K+  + +KG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P  D+ +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 61  GRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
            + C +ERSQ +N+ +A+ +LRAKLYE++L++++E
Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE 154


>gi|256079594|ref|XP_002576071.1| peptide chain release factor [Schistosoma mansoni]
 gi|238661330|emb|CAZ32306.1| peptide chain release factor, putative [Schistosoma mansoni]
          Length = 1202

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 129/240 (53%), Gaps = 23/240 (9%)

Query: 111 EADSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE--IHDGEEA---- 163
           E D N A  +E+ AGAGG E+  +A+ L+ MY  +A ++ +    L   +   EE     
Sbjct: 149 ERDLNSAVIMELFAGAGGKEAGLFAHDLMNMYHAFAVQQNWSFTVLHKTVMSNEECAPSH 208

Query: 164 -------------GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
                        G  +    +    AYG LK E GVHR+ R+    S ++ HTS  ++ 
Sbjct: 209 NETSLSYVRVEIEGEPTTEAGVMSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVS 268

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P  +D ++++I ++D + + +R +G GGQ+VN + SAVR+TH+PTG+V+ CQ+ER QH
Sbjct: 269 IQPKYED-VDVDIPDNDLKWEFHRPTGPGGQNVNKSTSAVRLTHLPTGIVISCQRERYQH 327

Query: 271 KNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            NK  A +ML+ +L E+ L+ +   I +I  S    +    +IR+Y   P   V D R N
Sbjct: 328 VNKILALDMLKERLREIHLKSQSHLIDSIRRSHLGNLDRSEKIRTYNF-PQDRVTDHRLN 386


>gi|156084766|ref|XP_001609866.1| peptide chain release factor 2 [Babesia bovis T2Bo]
 gi|154797118|gb|EDO06298.1| peptide chain release factor 2, putative [Babesia bovis]
          Length = 281

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 24/226 (10%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE----------------KRKFKTEA 154
           E D N   + + AG GGTE+ D+  ML RMY R+ +                 R      
Sbjct: 39  EYDKNHCKVTITAGVGGTEAFDFCKMLGRMYKRFIQHYCQPESWNRELYGDLPRSLHYVD 98

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
             +  G++AG +     + G  AY   KGE+G HRLVR SPY++  +R T+FSS+ V P+
Sbjct: 99  GTVVPGDKAGYRILEFEVHGDYAYKLFKGEKGTHRLVRNSPYNAMRKRQTTFSSVQVVPL 158

Query: 215 VD-DSIEIE-------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +  D  +++       ++E D  ++T R+ G GGQ+VN  ++AVRITH  TG+ V+ Q E
Sbjct: 159 LSADDRDVQHYESSKHVTEKDVIVETMRSGGKGGQNVNKVETAVRITHKKTGLSVRVQTE 218

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           RSQ +N+  A   +   +     ++  E  N     + E  WGR +
Sbjct: 219 RSQSQNREIAMRRISEMVDAHYKEQLREKCNELRGEEVEADWGRHM 264


>gi|226356572|ref|YP_002786312.1| peptide chain release factor 1 [Deinococcus deserti VCD115]
 gi|259585218|sp|C1CWJ1|RF1_DEIDV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226318562|gb|ACO46558.1| putative Peptide chain release factor 1 (RF-1) [Deinococcus deserti
           VCD115]
          Length = 366

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 163/317 (51%), Gaps = 32/317 (10%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+RER+ L++ +   +E    L  +  + ELA  E     + E +  L+++  E+E    
Sbjct: 47  LLREREALESDLRGAQE----LLSDPDMRELAQNE-----ITEATARLEQLGAELEVL-- 95

Query: 105 ESLLSGEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             LL  + D   +  LE+ AGAGG E+  +   LLRMYTR+AE R  +   LE  + +  
Sbjct: 96  --LLPTDPDDLKNVILELRAGAGGAEAGLFVMDLLRMYTRYAEDRGLRLNVLEASESDLG 153

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G       I G  A+   K E+GVHR+ R+   +S  R HTS  ++ V P  +   E+++
Sbjct: 154 GASKVVAEISGEFAFRAFKWERGVHRVQRVPATESQGRIHTSTVTVAVLPEAEQG-EVQL 212

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNML 280
             S+ RID +R+ GAGGQ VNTTDSAVR  +    P  ++V CQ  RSQ KN+ +A  +L
Sbjct: 213 DLSEVRIDVFRSQGAGGQGVNTTDSAVRAVYRAGTPDEIMVVCQDGRSQIKNREKALVVL 272

Query: 281 RAKLYELEL------QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE-KT 333
            ++L E E       + R+  A +G   ++E     +IR+Y   P   V D R   + K 
Sbjct: 273 ASRLAERERAARDAQEARDRAAQVGSGERSE-----KIRTYNY-PQNRVTDHRLEGDSKN 326

Query: 334 SPSD-VLDGDLDDFMKA 349
            P D V+ G L   + A
Sbjct: 327 HPLDSVMAGGLGPVVSA 343


>gi|323964710|gb|EGB60181.1| peptide chain release [Escherichia coli M863]
          Length = 160

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 97/147 (65%), Gaps = 6/147 (4%)

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 2   TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 61

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQMVK 324
           SQHKNKA+A ++L A+++  E+ KR++      + +  +G G +    R+Y   P   V 
Sbjct: 62  SQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVT 118

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351
           D R N+      +V++G LD  ++  +
Sbjct: 119 DHRINLTLYRLDEVMEGKLDMLIEPII 145


>gi|255023944|ref|ZP_05295930.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 184

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 105/171 (61%), Gaps = 11/171 (6%)

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   +S  R HTS +++ + P  ++ +EIE+ + D R DT+ ++GAGGQ VNT
Sbjct: 5   GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 63

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSK 303
           T SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE  AN     K
Sbjct: 64  TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RK 119

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +G G    +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 120 SAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 169


>gi|167948500|ref|ZP_02535574.1| peptide chain release factor 2 (programmed frameshift) [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 105

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 76/102 (74%), Gaps = 1/102 (0%)

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH PTG+VVQCQ +RSQHKNK QA   L+AKLYELE+QK+ E     E +K++IGW 
Sbjct: 1   MRITHNPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELEIQKQRETQQAVEDTKSDIGWD 60

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVL   + +KDLRTN+E  +   VLDG LD F++A+L
Sbjct: 61  SQIRSYVLDASR-IKDLRTNVETGNTQAVLDGGLDIFIEASL 101


>gi|163803524|ref|ZP_02197393.1| protein chain release factor B [Vibrio sp. AND4]
 gi|159172659|gb|EDP57512.1| protein chain release factor B [Vibrio sp. AND4]
          Length = 103

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 1/100 (1%)

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG Q
Sbjct: 1   MTHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 60

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL   + +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 61  IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 99


>gi|302420205|ref|XP_003007933.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
 gi|261353584|gb|EEY16012.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
          Length = 253

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 28/185 (15%)

Query: 140 MYTRWAEKRKFKTEAL--EIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           MY ++     ++  AL  E+ DG         E  ++ A L IK   AYG  +GE G+HR
Sbjct: 1   MYKQYCAYMGYRAVALKYEMADGAGSASTSAGEEPLQEAVLEIKDAGAYGLFRGEAGMHR 60

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE------------------ISESDCRID 231
           + R+   + + R HTS  ++WV P   DS E                    +  ++ RI+
Sbjct: 61  VQRVPDTEKSGRTHTSAVAVWVLPSFPDSHEAAGGGGGGDMNVDDPASDFYLDPAELRIE 120

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+R+TH+PTG VV  Q  R Q +N+  AW ++R+++  L  + 
Sbjct: 121 TMRARGAGGQHVNKTESAIRMTHLPTGTVVSMQDSRQQSRNREDAWKLMRSRVALLRREA 180

Query: 292 REEIA 296
           REE A
Sbjct: 181 REEQA 185


>gi|302857242|ref|XP_002959826.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
 gi|300254224|gb|EFJ39110.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
          Length = 194

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/100 (55%), Positives = 72/100 (72%), Gaps = 1/100 (1%)

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG L  E GVHR+ R+   ++  R HTS  ++ V P  D+ +++++ + D RI+T RASG
Sbjct: 95  YGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVLPQADE-VDVKLRDEDLRIETMRASG 153

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           AGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+A A 
Sbjct: 154 AGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLNRAAAL 193


>gi|146332693|gb|ABQ22852.1| mitochondrial peptide chain release factor 1 precursor-like protein
           [Callithrix jacchus]
          Length = 192

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/131 (47%), Positives = 88/131 (67%), Gaps = 6/131 (4%)

Query: 184 EQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           E G+HR+ RI     +SR    HT   S+ + P  D+ +++++   D RIDT+RA GAGG
Sbjct: 1   EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIILPQPDE-VDVKLDPKDLRIDTFRARGAGG 59

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVR+ HIPTG+VV+CQQERSQ +NK  A ++LRA+LY+  ++K +       
Sbjct: 60  QHVNTTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLYQQIIEKNK--CQQHS 117

Query: 301 SSKTEIGWGRQ 311
           + K ++G G Q
Sbjct: 118 TRKLQVGTGAQ 128


>gi|1149684|emb|CAA60204.1| prfA [Clostridium perfringens]
          Length = 136

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/127 (50%), Positives = 88/127 (69%), Gaps = 7/127 (5%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P VDD +EIEI++ D +ID +RASG GGQ VNTTDSAVRITH+P+G+VV CQ E
Sbjct: 2   ATVAVLPEVDD-VEIEINDKDIKIDVFRASGNGGQCVNTTDSAVRITHLPSGLVVSCQDE 60

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           +SQ KNK +A  +LRA+L+  E  + E +A I E  K+++G G    +IR+Y   P   V
Sbjct: 61  KSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVGTGDRSERIRTYNY-PQGRV 117

Query: 324 KDLRTNI 330
            D R N+
Sbjct: 118 TDHRINM 124


>gi|315254829|gb|EFU34797.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
          Length = 155

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 94/142 (66%), Gaps = 6/142 (4%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKN
Sbjct: 2   PELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKN 61

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTN 329
           KA+A ++L A+++  E+ KR++      + +  +G G +    R+Y   P   V D R N
Sbjct: 62  KAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRIN 118

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +      +V++G LD  ++  +
Sbjct: 119 LTLYRLDEVMEGKLDMLIEPII 140


>gi|169607138|ref|XP_001796989.1| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
 gi|160707160|gb|EAT86455.2| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
          Length = 294

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 36/231 (15%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGI--KSATLLIK 173
           LE+  GAGG+E+  +A  L RMY  +  +  F+T  L+   ++   EAG+    A   I+
Sbjct: 61  LEIRPGAGGSEAAIFAGDLFRMYQTFCNRSGFRTSLLKYENVNGTTEAGVPLSEAIFEIE 120

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
             +AYG  + ++                              +   +  I + + +++  
Sbjct: 121 NADAYGVFRSQEDFE---------------------------NPESDYYIDQKEIKLEVM 153

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR- 292
           RASGAGGQHVN T+SAVR+THIPT  VV  Q  RSQHKNK  AW+++R+++ +L  +KR 
Sbjct: 154 RASGAGGQHVNKTESAVRLTHIPTNTVVSMQDSRSQHKNKESAWSLMRSRIAQLRREKRE 213

Query: 293 EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           EE+ N+  S     ++G G ++R+Y     Q V D R+ I      DV+ G
Sbjct: 214 EEMVNLRRSVVGVAKMGRGDKVRTYNWG-QQRVTDHRSGITVHDLDDVMGG 263


>gi|71900150|ref|ZP_00682291.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
 gi|71730099|gb|EAO32189.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
          Length = 175

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 7/155 (4%)

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH+P
Sbjct: 5   ESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITHLP 64

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TGVVV+ Q ERSQH N+ +A   L+A+L E E  + ++      + K ++G G   ++IR
Sbjct: 65  TGVVVESQTERSQHANRDKAMKRLKAQLIESE--RSQQATAEAMTRKLQVGSGDRSQRIR 122

Query: 314 SYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347
           +Y   P   + D R  N+      ++++GDLD  +
Sbjct: 123 TYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 156


>gi|256045467|ref|ZP_05448354.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 141

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/129 (48%), Positives = 90/129 (69%), Gaps = 7/129 (5%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY+
Sbjct: 3   DIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYD 61

Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +E QK E  +   ++ ++++G G    +IR+Y   P   V D R N+       V++G+L
Sbjct: 62  MERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGEL 118

Query: 344 DDFMKATLA 352
           D+ + A ++
Sbjct: 119 DELVDALIS 127


>gi|307688011|ref|ZP_07630457.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 80

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 63/80 (78%)

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +D YR SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+
Sbjct: 1   MDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEM 60

Query: 290 QKREEIANIGESSKTEIGWG 309
           QK+       E +K++IGWG
Sbjct: 61  QKKNAEKQAMEDNKSDIGWG 80


>gi|308478247|ref|XP_003101335.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
 gi|308263236|gb|EFP07189.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
          Length = 390

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 123/234 (52%), Gaps = 17/234 (7%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ +GAGG E+  +   LL MY + A    +K + L++ +    G++SA + + G N Y
Sbjct: 141 IELSSGAGGQEAMLFTGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVY 200

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             ++ E GVHR+ R+   D  SR HTS SSI V P  ++   +  S+S  +I+  RASG 
Sbjct: 201 AKMRFEAGVHRVQRVPVND--SRMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGP 257

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  L A L + ++    E   I
Sbjct: 258 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KI 315

Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
               K ++G      +IR+Y  Q +  V D R  +  T         +D+F+ A
Sbjct: 316 VSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIQMAITG--------VDEFLSA 360


>gi|308454222|ref|XP_003089760.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
 gi|308269005|gb|EFP12958.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
          Length = 390

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 9/226 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ +GAGG E+  +   LL MY + A    +K + L++ +    G++SA + + G N Y
Sbjct: 141 IELSSGAGGQEAMLFTGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVY 200

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             ++ E GVHR+ R+   D  SR HTS SSI V P  ++   +  S+S  +I+  RASG 
Sbjct: 201 AKMRFEAGVHRVQRVPVND--SRMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGP 257

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  L A L + ++    E   I
Sbjct: 258 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KI 315

Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               K ++G      +IR+Y  Q +  V D R  +  T  ++ L  
Sbjct: 316 VSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIQMAITGVNEFLSA 360


>gi|148703821|gb|EDL35768.1| mitochondrial translational release factor 1, isoform CRA_c [Mus
           musculus]
          Length = 436

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 105/194 (54%), Gaps = 17/194 (8%)

Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
            E L+  E  D +D  LEV +G   GG   Q +   +  MY  ++  + +K E L     
Sbjct: 172 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 231

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217
           +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  D+
Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D R+DT+RA GAGGQHVNTTD           +VV+CQQERSQ KNK  A 
Sbjct: 292 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDR----------LVVECQQERSQLKNKEIAL 340

Query: 278 NMLRAKLYELELQK 291
            +LRA+LY+  ++K
Sbjct: 341 RVLRARLYQQIIEK 354


>gi|94984716|ref|YP_604080.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
 gi|119361533|sp|Q1J0S3|RF1_DEIGD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94554997|gb|ABF44911.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
          Length = 370

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 132/258 (51%), Gaps = 7/258 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +  E   L R  + L   ++  +E      D     EL  + D   + Q   ++
Sbjct: 22  DPAMLADPREYARLTRRHRELTPIVTLYREHAVLSSDLEGARELLADPDMRELAQGEIES 81

Query: 92  LQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           L     ++E  + E LL  +   D+ +  LE+ AGAGG E+  +A  LLRMYTR+AE   
Sbjct: 82  LSARLAQIE-AELEVLLLPTDPDDAKNVILELRAGAGGAEAALFAVDLLRMYTRYAEGAG 140

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K   L+  + +  G       + G  A+   K E+GVHR+ R+   +S  R HTS  ++
Sbjct: 141 LKLNVLDASESDLGGASKVVAEVTGEFAFRAFKWERGVHRVQRVPATESQGRIHTSTVTV 200

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQE 266
            V P  +   E+ +  S+ RID +R+ GAGGQ VNTTDSAVR  +    P  +VV CQ  
Sbjct: 201 AVLPEAEQG-EVSVDPSEVRIDVFRSQGAGGQGVNTTDSAVRAVYRPGTPDEIVVVCQDS 259

Query: 267 RSQHKNKAQAWNMLRAKL 284
           RSQ KN+ +A  +L ++L
Sbjct: 260 RSQIKNREKALVVLASRL 277


>gi|290984795|ref|XP_002675112.1| predicted protein [Naegleria gruberi]
 gi|284088706|gb|EFC42368.1| predicted protein [Naegleria gruberi]
          Length = 156

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 4/151 (2%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L++ ++FI      + +N  LL+L+  E+D  +++    +L  +   +E K+ ES LSG 
Sbjct: 2   LEDQLNFIDNTIADINNNEELLKLSEMENDKEMIEYIQKSLSDLINVLEKKEIESFLSGP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYT---RWAEKRKFKTEALEIHDGEEAGIKSA 168
            DS D YLE+H GAGG ++ DW+ MLL MY    R +E   F+   LE    +E GI+SA
Sbjct: 62  HDSKDCYLEIHTGAGGEDASDWSQMLLNMYINCLRGSELSSFEV-TLEDTSFKETGIRSA 120

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            L I G  AYG+LK EQGVHRLVR+SP++++
Sbjct: 121 LLFISGRYAYGYLKHEQGVHRLVRLSPFNAD 151


>gi|149050029|gb|EDM02353.1| rCG37077, isoform CRA_a [Rattus norvegicus]
          Length = 436

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 17/194 (8%)

Query: 104 FESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
            E L+  E  D ++  LEV +G   GG   Q +   +  MY  ++  + ++ E L     
Sbjct: 172 LEHLVPKEKCDRSNVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWRFELLNYTPA 231

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217
           +  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P  D+
Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++++   D R+DT+RA GAGGQHVNTTD           +VV+CQQERSQ KNK  A 
Sbjct: 292 -VDVKVDPRDLRVDTFRARGAGGQHVNTTDR----------LVVECQQERSQLKNKEIAL 340

Query: 278 NMLRAKLYELELQK 291
            +LRA+LY+  ++K
Sbjct: 341 RVLRARLYQQIIEK 354


>gi|71008811|ref|XP_758238.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
 gi|46097913|gb|EAK83146.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
          Length = 526

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 31/259 (11%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA---------------- 154
           EA +  A LEV  G GG ES  +   + RMY R+ E++  + +                 
Sbjct: 229 EAKAVGAVLEVRPGVGGQESTLFTAEVARMYQRFCEQKPVEEDGSGEWQVEMLSSTSVDV 288

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
                G  +G+K A + +KG   +  LK E GVHR+ RI    S  +  TS  ++ V P+
Sbjct: 289 STSSSGSGSGLKEAIIEVKGKGVFKKLKYEAGVHRVQRIPSTQSLGKLQTSTIAVMVLPI 348

Query: 215 VDDS---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            + S    +  +   D +++  R+ GAGGQHVN T+SA+R+TH PTG+ V  Q  RSQH+
Sbjct: 349 SEGSEHKADDLVDPKDVKVEVMRSRGAGGQHVNKTESAIRLTHEPTGISVSMQDSRSQHQ 408

Query: 272 NKAQAWNMLRAKLY------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           N+ +AW +LRA+L       E+E  +   +A +    +++     ++R+Y   P   V D
Sbjct: 409 NRTKAWAVLRARLLDRRLKQEVEGNRERRLAQVASMDRSD-----RVRTYNF-PQDRVTD 462

Query: 326 LRTNIEKTSPSDVLDGDLD 344
            R N+       +++G+ D
Sbjct: 463 HRINLSLNGIDAIMEGEHD 481


>gi|324506204|gb|ADY42656.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 376

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 123/226 (54%), Gaps = 8/226 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LEV AG GG E+  + + L+ MY  +A  + +    ++  + +  G++SA + + G  AY
Sbjct: 122 LEVTAGVGGIEAMLFTSELVDMYRNFAAFKGWTWTVMQQDNIQLGGVRSALIAVSGDEAY 181

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L+ E GVHR+ R+ P    +R HTS +S+ V P   + ++  +  +  +I+T RASG 
Sbjct: 182 GRLRFEAGVHRVQRM-PITDKTRMHTSTASVSVLPE-PEKVDAYVPSNSVKIETMRASGP 239

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN   +AVR+TH  +G+ V C  ER QH N   A+  L A L + ++ +  E +  
Sbjct: 240 GGQNVNKRSTAVRVTHKSSGISVHCMDERFQHLNIQIAFRRLAAILMQEKMDRIYEKS-- 297

Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             + K ++G      ++R+Y  +  + V D R     +  +DV+ G
Sbjct: 298 AAARKLQVGSKARAEKVRTYNFKDDR-VTDHRLKKSWSRVTDVMRG 342


>gi|116334943|ref|YP_802438.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
 gi|116235224|dbj|BAF35072.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
          Length = 229

 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 11/200 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+  G GG ES ++A  + +MY ++ EK+    E +       +  K   L ++     
Sbjct: 7   IEIRQGIGGEESINFAKDIYKMYVKFFEKQNINFEIIS-----NSNFKEIILKVENNVFD 61

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L  E G+HR+ RI   ++  R HTS  +++V  +  D+  +++   D +I+  ++SG+
Sbjct: 62  KKLLNESGIHRVQRIPKSETQGRVHTSTCTVFVANINLDN-NLKLKNEDLKIEICKSSGS 120

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE---EI 295
           GGQHVN T+SA++I H+PT + V+C  ERSQ+ NK +A  +L  K+  L+ QK     ++
Sbjct: 121 GGQHVNKTNSAIKIIHLPTKIAVECSDERSQNLNKTKALIILNMKI--LKFQKNNYNTQL 178

Query: 296 ANIGESSKTEIGWGRQIRSY 315
            N+ +   +     ++IR+Y
Sbjct: 179 NNVRKKLISNSERAKKIRTY 198


>gi|268552039|ref|XP_002634002.1| Hypothetical protein CBG20109 [Caenorhabditis briggsae]
 gi|187023852|emb|CAP37210.1| hypothetical protein CBG_20109 [Caenorhabditis briggsae AF16]
          Length = 389

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 118/226 (52%), Gaps = 9/226 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ +GAGG E+  +   LL MY + A    +K + L++      G++SA + + G N Y
Sbjct: 140 IELSSGAGGQEAMLFTGELLDMYQKLAATNSWKWDPLQVDSVPLGGVRSALIAVSGENVY 199

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             ++ E GVHR+ R+   DS  R HTS +SI V P  ++   +  S+S  +I+  RASG 
Sbjct: 200 SKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSV-KIEAMRASGP 256

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  L A L + ++    E   I
Sbjct: 257 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KI 314

Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               K ++G      +IR+Y  Q +  V D R  +  T   + L  
Sbjct: 315 VSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIGMAITGVEEFLSA 359


>gi|30694592|ref|NP_191278.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332646104|gb|AEE79625.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 406

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 168/325 (51%), Gaps = 15/325 (4%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93
           LW +  ++  ++ +      A+  +K+++ +  +  ++++L  ++  D S+ ++  D+  
Sbjct: 88  LWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 147

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +   + + +   LL  + D+  A + + +G+ G +SQ W   ++ MY +WAE+      
Sbjct: 148 DVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNAR 207

Query: 154 ALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
             E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S +   +
Sbjct: 208 VAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDII 263

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
              +  S + E+ E D  I +Y A     +     ++ V I HIP+GV +Q   ER++  
Sbjct: 264 PLFLRASPDFEVKEGDL-IVSYPAK----EDHKIAENMVCIHHIPSGVTLQSSGERNRFA 318

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+ +A N L+AKL  L + K ++++++ +  SK  +    + RSYV + ++MV D +T +
Sbjct: 319 NRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKTGL 376

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
           E      VLDG++   + A +++++
Sbjct: 377 EILDLKSVLDGNIGPLLGAHISMRR 401


>gi|281414235|ref|ZP_06245977.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
          Length = 129

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SG   Q V    SAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L L+K EE
Sbjct: 1   SSGPASQSVGAPHSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLLRKAEE 58

Query: 295 IANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            A   E +   +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +
Sbjct: 59  DAKKKEMAGDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGI 116


>gi|22135990|gb|AAM91577.1| putative protein [Arabidopsis thaliana]
 gi|30725574|gb|AAP37809.1| At3g57190 [Arabidopsis thaliana]
          Length = 372

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 168/325 (51%), Gaps = 15/325 (4%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93
           LW +  ++  ++ +      A+  +K+++ +  +  ++++L  ++  D S+ ++  D+  
Sbjct: 54  LWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 113

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +   + + +   LL  + D+  A + + +G+ G +SQ W   ++ MY +WAE+      
Sbjct: 114 DVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNAR 173

Query: 154 ALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
             E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S +   +
Sbjct: 174 VAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDII 229

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
              +  S + E+ E D  I +Y A     +     ++ V I HIP+GV +Q   ER++  
Sbjct: 230 PLFLRASPDFEVKEGDL-IVSYPAK----EDHKIAENMVCIHHIPSGVTLQSSGERNRFA 284

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+ +A N L+AKL  L + K ++++++ +  SK  +    + RSYV + ++MV D +T +
Sbjct: 285 NRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKTGL 342

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
           E      VLDG++   + A +++++
Sbjct: 343 EILDLKSVLDGNIGPLLGAHISMRR 367


>gi|17542784|ref|NP_500737.1| hypothetical protein W03F8.3 [Caenorhabditis elegans]
 gi|6093954|sp|O44568|RF1M_CAEEL RecName: Full=Probable peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|2736385|gb|AAB94190.1| Hypothetical protein W03F8.3 [Caenorhabditis elegans]
          Length = 389

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 9/226 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+  GAGG E+  +   LL MY + A    +K + L++ +    G++SA + + G   Y
Sbjct: 140 IELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVPLGGVRSALIAVSGEKVY 199

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             ++ E GVHR+ R+   DS  R HTS +SI V P  ++   +  S+S  +I+  RASG 
Sbjct: 200 AKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSV-KIEAMRASGP 256

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  L A L + ++    E   I
Sbjct: 257 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQKQVDAMLE--KI 314

Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               K ++G      +IR+Y  Q +  V D R  +  T  ++ L  
Sbjct: 315 VSKRKLQVGSKARAEKIRTYNFQ-HDRVTDHRIQMSITGVAEFLSA 359


>gi|124808906|ref|XP_001348439.1| peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
 gi|23497333|gb|AAN36878.1|AE014820_28 peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
          Length = 304

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 17/215 (7%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLL 171
           + N   +E   G GG E+  W+  LL  Y  +AE+ K K E ++ I D      K    +
Sbjct: 62  NKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLRI 121

Query: 172 IKGP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           IK       N Y   K E G+H++ RI   DS +R H+S +++ ++    +  + EI+  
Sbjct: 122 IKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINLK 181

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER+Q  NK  A   L  K+  
Sbjct: 182 DLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQH 241

Query: 287 LELQKREEIAN------IGESSKTEIGWGRQIRSY 315
           +E +++E +        I ES+++      +IR+Y
Sbjct: 242 MESKEKENMVQHERAKLIKESNRSN-----RIRTY 271


>gi|6735298|emb|CAB68125.1| putative protein [Arabidopsis thaliana]
          Length = 409

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 169/328 (51%), Gaps = 18/328 (5%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93
           LW +  ++  ++ +      A+  +K+++ +  +  ++++L  ++  D S+ ++  D+  
Sbjct: 88  LWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 147

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRKF 150
            +   + + +   LL  + D+  A + + +G+ G +SQD   W   ++ MY +WAE+   
Sbjct: 148 DVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQDLQIWTEQVVSMYIKWAERLGQ 207

Query: 151 KTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
                E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S + 
Sbjct: 208 NARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATV 263

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             +   +  S + E+ E D  I +Y A     +     ++ V I HIP+GV +Q   ER+
Sbjct: 264 DIIPLFLRASPDFEVKEGDL-IVSYPAK----EDHKIAENMVCIHHIPSGVTLQSSGERN 318

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           +  N+ +A N L+AKL  L + K ++++++ +  SK  +    + RSYV + ++MV D +
Sbjct: 319 RFANRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRK 376

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           T +E      VLDG++   + A +++++
Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404


>gi|15806000|ref|NP_294700.1| peptide chain release factor 1 [Deinococcus radiodurans R1]
 gi|7388053|sp|P56905|RF1_DEIRA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|6458704|gb|AAF10553.1|AE001950_5 peptide chain release factor 1 [Deinococcus radiodurans R1]
          Length = 375

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 129/246 (52%), Gaps = 17/246 (6%)

Query: 45  LMRERQHLDNAISFIKEI-QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           L+RER+  +  +S  +E+ QD    +  + ELA         Q     LQ    E+E  +
Sbjct: 49  LVREREQAEADLSGARELLQDPDMRDPDMKELA---------QLEVGGLQARLAEIE-AE 98

Query: 104 FESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            E LL  +   D  D  LE+ AGAGG E+  +   LLRMY R+A     K   L+  + +
Sbjct: 99  LEVLLLPTDPDDGKDVILELRAGAGGAEAGLFVMDLLRMYERYAAGLNLKLNVLDAAESD 158

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G       + G  A+  LK E+GVHR+ R+   +S  R HTS +++ V P  +   E+
Sbjct: 159 LGGASKVVAEVTGDFAFRALKWERGVHRVQRVPATESQGRIHTSTATVAVLPEAEPG-EV 217

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWN 278
            +  S+ RID +R+ GAGGQ VNTTDSAVR  +    P  ++V CQ  RSQ KN+ +A  
Sbjct: 218 NLDLSEVRIDVFRSQGAGGQGVNTTDSAVRAVYRAGTPDEIMVICQDGRSQIKNREKALQ 277

Query: 279 MLRAKL 284
           +L A+L
Sbjct: 278 VLTARL 283


>gi|213420646|ref|ZP_03353712.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 112

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+Q
Sbjct: 11  LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I
Sbjct: 71  DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKI 111


>gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
          Length = 427

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 6/188 (3%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LEI  G   G + A L  + P+A+ +L  E G+HR+ R+ P ++  R  TS +++ V P 
Sbjct: 200 LEIQAG--VGGEDAALFSR-PDAFRFLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPR 256

Query: 215 VDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +   +I++S    +ID  RASG GGQ VN +++AVRITH PTGV V C + +SQ +NK
Sbjct: 257 SSNLEDKIDLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQTENK 316

Query: 274 AQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
             A  +LRA+L +  ++K  EE     ++ K       +IR+Y  Q   +V D R  +  
Sbjct: 317 NLALELLRAQLLQQMMRKASEERGRAIDAQKGSKDRSEKIRTYNFQ-RDVVTDHRCRMHV 375

Query: 333 TSPSDVLD 340
               D LD
Sbjct: 376 NGVEDFLD 383


>gi|265991893|ref|ZP_06104450.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263002901|gb|EEZ15252.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 133

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 85/122 (69%), Gaps = 7/122 (5%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E
Sbjct: 2   RASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAE 60

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +   ++ ++++G G    +IR+Y   P   V D R N+       V++G+LD+ + A 
Sbjct: 61  --SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDAL 117

Query: 351 LA 352
           ++
Sbjct: 118 IS 119


>gi|56755637|gb|AAW25997.1| SJCHGC05491 protein [Schistosoma japonicum]
          Length = 431

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 119/229 (51%), Gaps = 22/229 (9%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRK--FKTEALEIHDGEEA------------- 163
           +E+ AGAGG E+  +A+ LL MY   A +R   F  +   +   EE              
Sbjct: 158 MELFAGAGGKEAGLFAHDLLIMYQALAIQRNWSFNIKQETVMSSEECTPSHNEKSLSYVR 217

Query: 164 ----GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
               G  +A   I    AYG LK E GVHR+ R+    S ++ HTS  ++ + P   D  
Sbjct: 218 VEIQGEPTAESGILSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVSIQPNYGDVD 277

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
               S+ D + + +R +G GGQ++N + SAVR+TH+PTG++V CQ+ER QH NK  A  M
Sbjct: 278 VDI-SDDDLKWEFHRPTGPGGQNLNKSTSAVRLTHLPTGIIVSCQRERHQHTNKKHALGM 336

Query: 280 LRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           L+ KL +++L+ +   I +I +S    +    +IR+Y   P   + D R
Sbjct: 337 LKEKLRDIQLKSQLHLIDSIRQSHLGNLDRSEKIRTYNF-PQDRITDHR 384


>gi|302781616|ref|XP_002972582.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
 gi|300160049|gb|EFJ26668.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
          Length = 163

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 19/146 (13%)

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +S+ + P V++ ++++I   + +IDTYRA GA GQHVNTT SAVR+TH+PTG+V
Sbjct: 1   RIHTSTASVAILPEVNE-VDVDIRNDEIKIDTYRAGGADGQHVNTTCSAVRVTHVPTGIV 59

Query: 261 VQCQQERSQHK------NKAQAWNMLRAKLYELELQK----REEIA--NIGESSKTEIGW 308
           V  Q ERS+HK      NKA+A ++L A+LYELE  +    R E+    IG S ++E   
Sbjct: 60  VAIQDERSRHKEGPSARNKAKALSILYARLYELERSRAAASRSELQQDQIGSSDRSE--- 116

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTS 334
              IR+Y   P   V D R  + + S
Sbjct: 117 --SIRTYNF-PQDRVTDHRVGVTQHS 139


>gi|242087755|ref|XP_002439710.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
 gi|241944995|gb|EES18140.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
          Length = 409

 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 2/247 (0%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   LL G  D   A + V A + G  S+ WA  +  MYT WA K+ +K   +E      
Sbjct: 158 QMYKLLKGPYDKEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTS 217

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
             I+SA + I+    +G L GE+G+H+++  S  +S+  +  S     +   +D  +++ 
Sbjct: 218 GHIQSAAMEIESEYMFGTLSGEKGMHQMIYSSLENSDIDQALSARVDIIPLFLDRPVDLH 277

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + + D  I+T  +     +      +AVR+ H+P+GV  +   ERS   NK +A + L+A
Sbjct: 278 LDDGD--IETSPSPSVHKKRGRRNGAAVRVQHVPSGVTAESSGERSYFANKLKATSRLKA 335

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KL  +  + R     +      E     + R Y   P+++V DL T I+ +  + VL+GD
Sbjct: 336 KLLLVARELRVSDVKLINRQAIEDKCNSETRRYTFGPHKLVHDLNTGIQLSDLNSVLEGD 395

Query: 343 LDDFMKA 349
           ++ F++ 
Sbjct: 396 IEPFIRG 402


>gi|124507187|ref|XP_001352190.1| peptide release factor, putative [Plasmodium falciparum 3D7]
 gi|23505221|emb|CAD52001.1| peptide release factor, putative [Plasmodium falciparum 3D7]
          Length = 404

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 10/237 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+ +  +E+ AG GG E++ ++  L  MY  +   R +  E  E+ + E    K+  L I
Sbjct: 125 DATEIKMEITAGVGGFEAKMFSKELFHMYENFCRVRNYDYEMKEVINDEAKENKNIVLYI 184

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY--PVVDDSI--EIEISESDC 228
           +G N Y     E G+HR+ R+ P +SN +  TS S +++       D+I  +I  S+ D 
Sbjct: 185 RGNNIYEDFYQENGIHRVQRV-PINSN-KVQTSTSIVFICDEKKQKDNIMKKINFSKQDL 242

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL- 287
            I T R+ GAGGQ VN  ++ V+I H PT + V+ Q+  SQ  NK  A  +L+ KLY   
Sbjct: 243 LIQTKRSGGAGGQSVNKNETCVKILHKPTNIFVEVQKTSSQIHNKNLAMQLLKDKLYNFY 302

Query: 288 -ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            EL+K   +    ++ K       +IR+Y    + ++ D  TN + +   +   G +
Sbjct: 303 YELEKNNFLKE-KKNQKQSADRSHKIRTYNF-LHDVIIDHITNTQYSGIQNFFKGHM 357


>gi|70951470|ref|XP_744973.1| peptide chain release factor 1 [Plasmodium chabaudi chabaudi]
 gi|56525140|emb|CAH78733.1| peptide chain release factor 1, putative [Plasmodium chabaudi
           chabaudi]
          Length = 260

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 27/198 (13%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR----------------KFKTEALE 156
           + N   +E   G GG E++ W+N L + Y  +AEK+                K  T+   
Sbjct: 20  NKNHIRIEFRPGIGGDEAELWSNELKKTYQNYAEKKKCSVKSVKDITNSIIIKSPTDVQI 79

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             DGEE  I          + Y   K E G H++ RI   +S  + H+S ++I ++ + D
Sbjct: 80  NKDGEEIQI----------SLYDLFKNESGTHQVKRIPKNESKDKIHSSTATIAIF-IQD 128

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D+ + EI+  D +I T+R+S  GGQ+VN  +S VRI HIPTG+  + Q+ER+Q  NK  A
Sbjct: 129 DADKYEINSKDLKIMTFRSSKPGGQNVNKIESGVRIVHIPTGIQTESQEERTQELNKRIA 188

Query: 277 WNMLRAKLYELELQKREE 294
              L  K+++L  +++EE
Sbjct: 189 MKKLTQKIHDLRSREKEE 206


>gi|323333643|gb|EGA75036.1| Mrf1p [Saccharomyces cerevisiae AWRI796]
          Length = 311

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 8/146 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177
           LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E  +GI  A L I+   +
Sbjct: 157 LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 216

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230
           Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D       + E      + R+
Sbjct: 217 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 276

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIP 256
           D  RASG GGQHVNTTDSAVR+THIP
Sbjct: 277 DIMRASGKGGQHVNTTDSAVRLTHIP 302


>gi|221060184|ref|XP_002260737.1| Peptide chain release factor [Plasmodium knowlesi strain H]
 gi|193810811|emb|CAQ42709.1| Peptide chain release factor, putative [Plasmodium knowlesi strain
           H]
          Length = 263

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 22/196 (11%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           + N   +E   G GG E+  W+  LL  Y  +AE+   + E   +HD  E+      LL+
Sbjct: 20  NKNCVRIEFRPGVGGEEAFLWSTELLNTYKAFAERINCRVE--RVHDASES------LLV 71

Query: 173 KGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
             P+               Y  LK E G+H++ R+   +S  + H+S ++I V+   D+ 
Sbjct: 72  VSPSDVCITQEGYEIKTTLYDLLKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHEDEQ 131

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            + EI+  D RI T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER+Q  NK  A  
Sbjct: 132 KKDEINLKDLRITTFRSSKPGGQNVNKIESGVSILHKPTGIKTECQEERTQEMNKKIAMK 191

Query: 279 MLRAKLYELELQKREE 294
            L  K+ +   ++ EE
Sbjct: 192 RLIQKVLQFRHKQSEE 207


>gi|297817036|ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322239|gb|EFH52660.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 409

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 168/328 (51%), Gaps = 18/328 (5%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93
           LW +  ++  ++ +       +  +K+++ +  +  ++++L  ++  D S+ ++  D+  
Sbjct: 88  LWDDPAKSDEILLKLADRAKTVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 147

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRKF 150
            +   + + +   LL+ + D+  A + + +G+   +SQD   W   ++ MY +WAEK   
Sbjct: 148 DVSRSLHHYEMSKLLTDQYDAEGACMIIKSGSQDAKSQDLQIWTEQVVSMYIKWAEKLGQ 207

Query: 151 KTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
                E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S + 
Sbjct: 208 NARVAEKCSFLSNKSGVNSATIEFEFDFAYGYLLGERGVHRLI----ISSTSSEECSATV 263

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             +   +  S + E+ E D  I +Y A     ++    ++ V I HIP+G+ V+   ER+
Sbjct: 264 DIIPLFLRASPDFEVKEDDL-IVSYPAK----ENHKIAENMVSIQHIPSGITVESSGERN 318

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           +  N+ +A N L+AKL  L + K ++I+++ + +SK  +    + R YV +  +MV D +
Sbjct: 319 RFANRIKALNRLKAKL--LVIAKEQKISDVNKINSKNILKPWEETRRYVSKGQKMVVDTK 376

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           T +E      VLDG++   + A +++++
Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404


>gi|323355075|gb|EGA86905.1| Mrf1p [Saccharomyces cerevisiae VL3]
          Length = 201

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 8/146 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177
           LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E  +GI  A L I+   +
Sbjct: 47  LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 106

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230
           Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D       + E      + R+
Sbjct: 107 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 166

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIP 256
           D  RASG GGQHVNTTDSAVR+THIP
Sbjct: 167 DIMRASGKGGQHVNTTDSAVRLTHIP 192


>gi|156101992|ref|XP_001616689.1| peptide chain release factor 1 [Plasmodium vivax SaI-1]
 gi|148805563|gb|EDL46962.1| peptide chain release factor 1, putative [Plasmodium vivax]
          Length = 263

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 33/223 (14%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           + N   +E   G GG E+  W+  LL  Y  +AE+   + E   +HD  E+      L++
Sbjct: 20  NKNCIRIEFRPGVGGEEALLWSRELLNTYKTFAERMNCRVE--RVHDAGES------LVV 71

Query: 173 KGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
             P+               Y   K E G+H++ R+   +S  + H+S ++I V+   D+ 
Sbjct: 72  TSPSDVCIAKQGQEIKASLYDLFKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHTDEH 131

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            + E++  D RI T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER+Q  NK  A  
Sbjct: 132 RKDEVNLKDLRIKTFRSSKPGGQNVNKIESGVSILHKPTGMQTECQEERTQEMNKKIALK 191

Query: 279 MLRAKLYEL------ELQKREEIANIGESSKTEIGWGRQIRSY 315
            L  K+  L      E  +RE    + +SS++     R+IR+Y
Sbjct: 192 RLTEKISHLRHKQSEEQLRRERSKLVKDSSRS-----RRIRTY 229


>gi|154270254|ref|XP_001535983.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410054|gb|EDN05442.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 223

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 22/152 (14%)

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWV---YPVV----DDSIEIEISESDCRIDT---- 232
           E GVHR+ R+   ++  R HTS  S+ +   YP +    D  +  +   SD  ID     
Sbjct: 7   EAGVHRVQRVPTTENKGRTHTSAVSVVILPSYPSIIGEGDSELNFDDPNSDYYIDPQEVN 66

Query: 233 ---YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
               RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   
Sbjct: 67  VEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRR 126

Query: 290 QKREE------IANIGESSKTEIGWGRQIRSY 315
           + REE         +G  +K  +G G +IR+Y
Sbjct: 127 EAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 156


>gi|82540995|ref|XP_724771.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479536|gb|EAA16336.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 2075

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 116/220 (52%), Gaps = 28/220 (12%)

Query: 113  DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT--L 170
            + N   +E  +G GG E++ W+N L ++Y  +AEK+K   ++          +K AT  L
Sbjct: 1835 NKNHVRIEFRSGIGGDEAELWSNELKKIYQNYAEKKKCTVKS----------VKDATNSL 1884

Query: 171  LIKGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
            +IK PN               Y   K E G+H++ RI   ++  +  +S ++I V+ + D
Sbjct: 1885 IIKSPNDVKINKEGEEIQISLYDLFKNESGIHQVKRIPKNENKEKIQSSTATIAVF-IQD 1943

Query: 217  DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
             + + EI+  D +I T+R+S  GGQ+VN  +SAVRI H  TG+  + Q+ER+Q  NK  A
Sbjct: 1944 YANKYEINSKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESQKERTQELNKKIA 2003

Query: 277  WNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSY 315
               L  K+++L  +++E+ + N       +     +IR+Y
Sbjct: 2004 MKKLTQKIHDLRNREKEQSLQNERSKFTKDCSRSNRIRTY 2043


>gi|307943084|ref|ZP_07658429.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
 gi|307773880|gb|EFO33096.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
          Length = 217

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 1/174 (0%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           ++ A L V +G G  E +   +++L   T  A K +   E     +G      SA L + 
Sbjct: 9   TDTARLLVTSGDGPRECRRAVSLVLARITTEAAKLRVNVEETLSTEGPNQDPASAILRLS 68

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G +A    K   G  R    SP+  + +R   F  ++      D  E  +S SD + +T+
Sbjct: 69  GKDASEIAKRWTGTIRWTCQSPFRPHHKRKNWFVGVFALATERDQTET-LSPSDLKFETF 127

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           RA G GGQH NTTDSAVR+TH+PTG+ V  + ERSQH+N+A A N L  +LY L
Sbjct: 128 RAGGPGGQHQNTTDSAVRLTHLPTGLSVVARDERSQHRNRAAALNRLHDRLYLL 181


>gi|213419806|ref|ZP_03352872.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 133

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 75/114 (65%), Gaps = 6/114 (5%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR+
Sbjct: 1   RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQ 60

Query: 294 EIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +      + +  +G G +    R+Y   P   V D R N+      + ++G LD
Sbjct: 61  QAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 111


>gi|213583820|ref|ZP_03365646.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 95

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 1/92 (1%)

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           + QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL  
Sbjct: 1   MTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD 60

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 61  SR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 91


>gi|225714246|gb|ACO12969.1| Peptide chain release factor 1 [Lepeophtheirus salmonis]
          Length = 352

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 152/342 (44%), Gaps = 67/342 (19%)

Query: 43  KMLMRERQHLDNAISFIKEIQ-----------DRLCDNLILLELALEEDDC--SILQETS 89
           ++  R   H    I++IK+I+           + L  ++  L+  L+E +   S+ QE  
Sbjct: 14  RLFHRNHPHFPEFINYIKDIESSPLRHENKLFNVLRSDIYALQTGLQEIEALKSMAQEEK 73

Query: 90  DNLQRI-----KLEVEYKQFESLLSGEA-------DSNDAYLEVHAGAGGTESQDWANML 137
           D  + +     KLE +  +  + L+          D ++A LEV  GAGG E+  +A  +
Sbjct: 74  DFEKEVLEDLSKLEPQVDELVTRLANNILISNQRYDQDNAVLEVLPGAGGLEASVFAAEV 133

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEA-------GIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +Y  +   R +    +E+ +  E         I  A++LIKG  +             
Sbjct: 134 FNLYCSYC--RDYLGYNVEVQEHVETTGASDYFAISKASILIKGSKS------------- 178

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
                     R  TS  S+ V P++ D   I+++ SD  +   R+SG GGQ VNTT+SAV
Sbjct: 179 ---------DRLQTSTRSLSVLPLLTDFSRIDVNPSDLSVTYCRSSGPGGQGVNTTNSAV 229

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-- 308
           R+ H PT +   CQ+ R+ H+N   A   L+ +LY +  +K  E + +  + K++IG   
Sbjct: 230 RMIHNPTKISAHCQELRTAHENYGLALEKLKRELYRVMFEK--ENSKVSSTRKSQIGQMN 287

Query: 309 -GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +IR+Y      ++      + K  P      +L DFMK 
Sbjct: 288 RNEKIRTYHYGRNTVLDHRIQGVVKQVP------NLFDFMKG 323


>gi|198421557|ref|XP_002128173.1| PREDICTED: similar to mitochondrial translational release factor
           1-like [Ciona intestinalis]
          Length = 432

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 98  EVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           E++    ESL++ +   D++ A LEV  G GG E+  +A  +  MY ++  +  +  + +
Sbjct: 153 EIKTSIVESLVTDKDSEDNDGAVLEVTPGIGGVEAAMFATEIFDMYQKFCHRSGYDLDVV 212

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
           E   GE   +  A  ++   + Y +   K E G+HR+ R+   + + R HTS  S+ V P
Sbjct: 213 EYDMGENGALVKANAVVSSGDGYAYSLFKHEAGIHRVQRVPKTEKSGRLHTSTVSVAVLP 272

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             ++ I   +   D +I   ++SG GGQH N+T S   + HIPTG +V+ ++ R Q  N 
Sbjct: 273 KSNE-ILPPLQRKDLKITFSKSSGHGGQHANSTLSCAVVCHIPTGNIVRVEETRCQKTNL 331

Query: 274 AQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
            +A   L   ++   ++ K+ ++ ++            +IR+Y    +  + D R  +  
Sbjct: 332 DRAQQKLTHIVHSEAMKAKQAQVNSVRRKQTRSRERSDKIRTYNFH-HSRITDHRIGVTL 390

Query: 333 TSPSDVLDG 341
           +   + L+G
Sbjct: 391 SGIEEFLNG 399


>gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 439

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 3/167 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           + V   AGG E+  +A  L  MY  +A E R +K   +   DG EA   S    + G   
Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRTYATEFRNWKVRPVVKDDGSEAA-SSNEFQVSGEGV 241

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  +  E GVH++ R+   D+  +  TS +   + PV+D  + +++ ESDC+ID  R SG
Sbjct: 242 YRNMHHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHESDCKIDFVRGSG 300

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A  M+  ++
Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQMVAQQI 347


>gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei TREU927]
 gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei]
 gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 459

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 10/180 (5%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA----- 168
           +N   LEV   AGG E+  +A+ LL MY  +A + +  +  ++  +G+   + S      
Sbjct: 189 TNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGPAVG 248

Query: 169 ----TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
                + +KG   Y  L+ E GVH++ R+   D + +  TS + + + PV+D  + +++ 
Sbjct: 249 GNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMPVLD-PVSVDVH 307

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E DC I+  R SG GGQ + ++ +AV +TH P+G+ V+C Q RS   NK  A  M+  +L
Sbjct: 308 EKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQQL 367


>gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 459

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 10/180 (5%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA----- 168
           +N   LEV   AGG E+  +A+ LL MY  +A + +  +  ++  +G+   + S      
Sbjct: 189 TNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGPAVG 248

Query: 169 ----TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
                + +KG   Y  L+ E GVH++ R+   D + +  TS + + + PV+D  + +++ 
Sbjct: 249 GNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMPVLD-PVSVDVH 307

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E DC I+  R SG GGQ + ++ +AV +TH P+G+ V+C Q RS   NK  A  M+  +L
Sbjct: 308 ERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQQL 367


>gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 302

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 3/167 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           + V   AGG E+  +A  L  MY  +A E  K++   + + DG EA   S    ++G   
Sbjct: 46  INVEGKAGGEEASLFAAELAEMYRTYAMEFCKWEVCPVAMDDGSEA-CSSNEFQVRGEGV 104

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  +  E GVH++ R+   D+  +  TS +   + PV+D  + +++ ESDC+ID  R SG
Sbjct: 105 YRNMHHEIGVHKVQRVPVTDATGKMQTSTAVFTLMPVLD-PVSVDVHESDCKIDFVRGSG 163

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A  M+  ++
Sbjct: 164 PGGQGMQSSSNCVVLTHKPSGISVKCHQCRSALGNKELALQMVAQQI 210


>gi|218297204|ref|ZP_03497866.1| PCRF domain protein [Thermus aquaticus Y51MC23]
 gi|218242481|gb|EED09020.1| PCRF domain protein [Thermus aquaticus Y51MC23]
          Length = 148

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           KLEV Y   E+LL+      +A L +  GAGGTE+ DWA MLLRMYTR+AE++ F+ E +
Sbjct: 50  KLEVLYH--ETLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFEVEVV 107

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           ++  G EAG+  A +L+KG NAYG L  E GVHR
Sbjct: 108 DLRPGAEAGVDYAQILVKGENAYGLLSAEAGVHR 141


>gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major]
 gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain
           Friedlin]
          Length = 439

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 3/163 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           + V   AGG E+  +A  L  MY  +A E R +K   +   DG EA   S    + G   
Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDDGSEAA-NSNEFQVCGEGV 241

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  ++ E GVH++ R+   D+  +  TS +   + PV+D  + +++ E+DC+ID  R SG
Sbjct: 242 YRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHENDCKIDFVRGSG 300

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A  M+
Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQMV 343


>gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
 gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
          Length = 439

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           + V   AGG E+  +A  L  MY  +A E R +K   +   DG EA   S    + G   
Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDDGSEAA-NSNEFQVCGEGV 241

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  ++ E GVH++ R+   D+  +  TS +   + PV+D  + +++ ESDC+ID  R SG
Sbjct: 242 YRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHESDCKIDFVRGSG 300

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A
Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELA 339


>gi|322499707|emb|CBZ34781.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 439

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           + V   AGG E+  +A  L  MY  +A E R +K   +   DG EA   S    + G   
Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDDGSEAA-NSNEFQVCGEGV 241

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  ++ E GVH++ R+   D+  +  TS +   + PV+D  + +++ ESDC+ID  R SG
Sbjct: 242 YRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHESDCKIDFVRGSG 300

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A
Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELA 339


>gi|221054928|ref|XP_002258603.1| peptide release factor [Plasmodium knowlesi strain H]
 gi|193808672|emb|CAQ39375.1| peptide release factor, putative [Plasmodium knowlesi strain H]
          Length = 407

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 16/248 (6%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANM 136
           +DD   L  T +++  + L+     ++S+++ E   D+ +  +E+  G GG E++ + N 
Sbjct: 108 DDDIKELLRTIEDVGSLLLQEVVDFYKSVVNTEHHLDTEEVKVEITPGVGGLEAKLFCND 167

Query: 137 LLRMYTRWAEKRKFKTEAL--EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           L  MY ++ +++ F+   +  E  D ++ G +S   +IKG   Y     E G+HR+ RI 
Sbjct: 168 LFSMYEQFCKEKNFQCNLIKGESEDTKD-GYRSIVAIIKGERVYEHFVQENGIHRVQRI- 225

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEI------SESDCRIDTYRASGAGGQHVNTTDS 248
           P +S  +  TS S ++V    ++S++ +I       ++D  I+T R+ GAGGQ VN  ++
Sbjct: 226 PVNSK-KIQTSTSVVFVSD--EESLKKKIQKKMNFGKNDLLIETKRSGGAGGQSVNKNET 282

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIG 307
            V+I H PT + V+ Q+  SQ +N++ A   L+ KL+    Q+ +++     +S K    
Sbjct: 283 CVKILHKPTNLSVEVQKTSSQIQNRSMAIQALKNKLFSFYYQQEKDLYFKYKKSHKMSGD 342

Query: 308 WGRQIRSY 315
              +IR+Y
Sbjct: 343 RSEKIRTY 350


>gi|77415494|gb|AAI05974.1| MTRF1L protein [Homo sapiens]
          Length = 235

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|56203460|emb|CAI18899.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 235

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|114609873|ref|XP_001140447.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 1 [Pan troglodytes]
          Length = 235

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|237840539|ref|XP_002369567.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211967231|gb|EEB02427.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221503426|gb|EEE29124.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 497

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 59/282 (20%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW---------------------------- 144
           + N A +E+   AGG E+Q WA  L  MYTR+                            
Sbjct: 180 NENVAIVEIRPAAGGEEAQLWATDLAEMYTRFFTLQKGWRFSQLQLGGPNAGSRPPTQQR 239

Query: 145 -----AEKRKF---KTEALEIHDGEEA------GIKSATLLIKGPNAYGWLKGEQGVHRL 190
                + KR+     +++    DG  A      G+      ++GP  Y  L  E GVHR+
Sbjct: 240 REDAVSGKRRAHANSSDSAAKDDGRSALSGALGGVTCIAFRVEGPGVYRQLLKESGVHRV 299

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   ++  R HTS +++ +  V + +   +EI+++D  I T R+SG GGQ+VN  ++A
Sbjct: 300 QRVPRTEAQGRIHTSTATVAI--VAEHNFRGVEINDADLVIRTARSSGCGGQNVNKVETA 357

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           V + H+PTG+ V CQQER+Q  NK  A  +L   L +L  +  EE+   + E  + ++  
Sbjct: 358 VDLLHVPTGIRVFCQQERTQAANKKAAKAVL---LKKLAARHEEEVVQQMREERRDQVSS 414

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSD-------VLDGDL 343
           G  +RS  ++ Y   +D R N  + +  +       VL+G L
Sbjct: 415 G--LRSERVRTYNF-RDGRVNEHRLTGGEGLFSLKSVLEGQL 453


>gi|332213671|ref|XP_003255948.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 4 [Nomascus leucogenys]
          Length = 235

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%)

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P 
Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 190

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
             + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|167933019|ref|ZP_02520106.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7b]
          Length = 106

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 7/95 (7%)

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-- 297
           GQ VNTTDSAVRITH+PTG+ V  Q ERSQ +NK  A  +LR+KL +++ ++  E  N  
Sbjct: 1   GQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKILRSKLAQIQTEQHAETINDL 60

Query: 298 -IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
             GES+     WG QIR+Y+L PY ++KD RT  E
Sbjct: 61  RAGESA----NWGSQIRNYILHPYTLIKDTRTKYE 91


>gi|218682457|ref|ZP_03530058.1| peptide chain release factor-like protein [Rhizobium etli CIAT 894]
          Length = 186

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 82/154 (53%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G KSA + + G  A G      G  R    SP     +R   + ++       +  ++ I
Sbjct: 33  GAKSAVVSLDGLEAEGIASSYCGTIRFTFKSPARPGHKRQNWYVAVQRIDAGTEGGKVTI 92

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
             +D R +T RA G GGQH NTTDSAVRI H PTG++V+ + ERSQH+NKA A   L A 
Sbjct: 93  DPADLRFETLRAGGPGGQHQNTTDSAVRILHRPTGLMVRARDERSQHRNKALALRRLEAM 152

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           L  +E++K+E   +    +   I  G +++S+ L
Sbjct: 153 LRHIEVEKQEAAKSGRFVANRTIERGNEVKSFKL 186


>gi|297604413|ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group]
 gi|255676317|dbj|BAF17292.2| Os05g0375600 [Oryza sativa Japonica Group]
          Length = 407

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   LL G  D   A + V AG+           +  MY+ WA K+  K   +E      
Sbjct: 165 QMYKLLKGPYDKEGACIIVTAGSD--------ERIFCMYSSWARKQGCKDGLVEKITSTS 216

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
             + +A + I+    +G L GE+G HR++  S  ++ +   TS     +   +D  + + 
Sbjct: 217 GRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAGTYEATSARVDIIPLFLDRPVNLH 276

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E+D  I    +      H N   SA+R+ HI TGV  +   ERS   NK +A + L+A
Sbjct: 277 LDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAISRLKA 333

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KL  +  + R       +    E  + R+ R Y   P ++V DL T ++ +  + VLDGD
Sbjct: 334 KLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLVHDLNTGLQLSELNSVLDGD 393

Query: 343 LDDFMKATL 351
           +D F++  +
Sbjct: 394 IDPFIRGRI 402


>gi|95007275|emb|CAJ20495.1| peptide chain release factor 1, putative [Toxoplasma gondii RH]
 gi|221482780|gb|EEE21111.1| peptide chain release factor, putative [Toxoplasma gondii GT1]
          Length = 497

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 52/261 (19%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW---------------------------- 144
           + N A +E+   AGG E+Q WA  L  MYTR+                            
Sbjct: 180 NENVAIVEIRPAAGGEEAQLWATDLAEMYTRFFTLQKGWRFSQLQLGGPNAGSRPPTQQR 239

Query: 145 -----AEKRKF---KTEALEIHDGEEA------GIKSATLLIKGPNAYGWLKGEQGVHRL 190
                + KR+     +++    DG  A      G+      ++GP  Y  L  E GVHR+
Sbjct: 240 REDAVSGKRRAHANSSDSAAKDDGRSALSGALGGVTCIAFRVEGPGVYRQLLKESGVHRV 299

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   ++  R HTS +++ +  V + + + + I+++D  I T R+SG GGQ+VN  ++A
Sbjct: 300 QRVPRTEAQGRIHTSTATVAI--VAEHNFQGVAINDADLVIRTARSSGCGGQNVNKVETA 357

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           V + H+PTG+ V CQQER+Q  NK  A  +L   L +L  +  EE+   + E  + ++  
Sbjct: 358 VDLLHVPTGIRVFCQQERTQAANKKAAKAVL---LKKLAARHEEEVVQQMREERRDQVSS 414

Query: 309 GRQIRSYVLQPYQMVKDLRTN 329
           G  +RS  ++ Y   +D R N
Sbjct: 415 G--LRSERVRTYNF-RDGRVN 432


>gi|15896625|ref|NP_349974.1| protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|15026468|gb|AAK81314.1|AE007835_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510788|gb|ADZ22424.1| Protein chain release factor B [Clostridium acetobutylicum EA 2018]
          Length = 204

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 8/179 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPN 176
           +L++ AG G  ES  +  + L +  +  + R  K E L+   GE+ G +KS  L + G  
Sbjct: 2   WLQISAGTGPVESCRFVYLFLNLVKKECKYRNIKIEVLDFVPGEKIGTLKSVFLKLSGEG 61

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRIDTYR 234
           A  +     G H L+  S Y  N RR   F ++  + Y   +D     +++ D  I+  R
Sbjct: 62  AKTYASSITGTHLLIWESEYRKNHRRKNWFIAVNSFSYETNED-----LNDKDIIIEKMR 116

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +SG GGQHVN T++AVRITH  TG+VV   +ERSQ  N   A   L  +L +L  ++R+
Sbjct: 117 SSGKGGQHVNKTETAVRITHKKTGIVVNSSEERSQFANIKLAKARLIIELKKLSDERRK 175


>gi|195351215|ref|XP_002042131.1| GM10257 [Drosophila sechellia]
 gi|194123955|gb|EDW45998.1| GM10257 [Drosophila sechellia]
          Length = 166

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 56/72 (77%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           I++ I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A  
Sbjct: 6   IQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMK 65

Query: 279 MLRAKLYELELQ 290
            LR++L + +L+
Sbjct: 66  RLRSRLVQQQLE 77


>gi|241205972|ref|YP_002977068.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859862|gb|ACS57529.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 204

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 97/201 (48%), Gaps = 4/201 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKR--KFKTEALEIHDGEEAGIKSATLLIKGPN 176
           L + AG G  E +     LL +  R A +    F+T    + D  + G KSA + + G  
Sbjct: 6   LLITAGNGPVECRMALAALLGILEREAVRLGCSFETNLGPMPD--QHGAKSAIVSLNGFE 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A        G  R    S      +R   + S+       +  E+ I  +D R +T RA 
Sbjct: 64  AEQIANDYCGTIRFTFKSQVRPGHKRQNWYVSVQRIDTKPEGGEVTIDPADLRFETLRAG 123

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQH NTTDSAVR+ H PTG+V   + ERSQH+NKA A   L A L  LE++K+E   
Sbjct: 124 GPGGQHQNTTDSAVRVLHRPTGLVATARDERSQHRNKALALRRLEAMLRHLEVEKQEAAK 183

Query: 297 NIGESSKTEIGWGRQIRSYVL 317
           +    +   I  G +++S+ L
Sbjct: 184 SGRFIANRTIERGNEVKSFKL 204


>gi|218196675|gb|EEC79102.1| hypothetical protein OsI_19734 [Oryza sativa Indica Group]
 gi|222631381|gb|EEE63513.1| hypothetical protein OsJ_18329 [Oryza sativa Japonica Group]
          Length = 214

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 3/213 (1%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+ WA K+  K   +E        + +A + I+    +G L GE+G HR++  S  ++ 
Sbjct: 1   MYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAG 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           +   TS     +   +D  + + + E+D  I    +      H N   SA+R+ HI TGV
Sbjct: 61  TYEATSARVDIIPLFLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGV 117

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
             +   ERS   NK +A + L+AKL  +  + R       +    E  + R+ R Y   P
Sbjct: 118 TAESSGERSYFANKMKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGP 177

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            ++V DL T ++ +  + VLDGD+D F++  + 
Sbjct: 178 QKLVHDLNTGLQLSELNSVLDGDIDPFIRGRIV 210


>gi|169840002|ref|ZP_02873190.1| peptide chain release factor 2 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 86

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 56/78 (71%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E+ I++ D RID YR+ G GGQ VNTTDSAVRITH+PTG+ V  Q ERSQ +NK  A  +
Sbjct: 4   EVNINDKDLRIDVYRSGGRGGQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKI 63

Query: 280 LRAKLYELELQKREEIAN 297
           LR+KL +++ ++  E  N
Sbjct: 64  LRSKLAQIQTEQHAETIN 81


>gi|222872913|gb|EEF10044.1| predicted protein [Populus trichocarpa]
          Length = 245

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +KT++GWG QIRS
Sbjct: 1   MPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIRS 60

Query: 315 YVLQPYQMVKDLRTNIE 331
           YVL     +KDLRTN+E
Sbjct: 61  YVLD-NSRIKDLRTNVE 76


>gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 456

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 26/229 (11%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           LEED  S+L +   N+      V  ++ ES  +  + S    LEV   AGG E+  +A  
Sbjct: 141 LEEDMESLLNQVR-NMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFAAE 199

Query: 137 LLRMYTRWAEK-RKFKTEALE--------------------IHDGEEAGIKSATLLIKGP 175
           L  MY  ++   R ++ E  E                           G+K   +   G 
Sbjct: 200 LAEMYREYSTGVRNWRIEEAENGAGGAAGGGGGGGDASALSAPALASTGVKFKAI---GD 256

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           N Y  L+ E GVH++ R+   D + +  TS + + + PV+ D + + + E+DC+I+  R 
Sbjct: 257 NVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVL-DPVSVNVHENDCKIEFVRG 315

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           SG GGQ + ++ +AV +THIP+G+ V+C Q RS   NK  A  ++  +L
Sbjct: 316 SGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKEIALQLVAQQL 364


>gi|156081736|ref|XP_001608361.1| peptide release factor [Plasmodium vivax SaI-1]
 gi|148800932|gb|EDL42337.1| peptide release factor, putative [Plasmodium vivax]
          Length = 446

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 127/247 (51%), Gaps = 14/247 (5%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANM 136
           +DD   L    +++  + L+     ++S+++ E   D+++  LE+  G GG E++ + + 
Sbjct: 147 DDDVRQLLRAVEDVGSLLLQDVVDFYKSVVNAEHHLDTDEVKLEITPGVGGLEAKLFCSD 206

Query: 137 LLRMYTRWAEKRKFKTEALEIH-DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL MY  + + + F+   +    D  + G ++   ++KG   Y     E G+HR+ R+ P
Sbjct: 207 LLSMYEHFCKLKDFQCTLIRGESDDAKDGHRNIVAVVKGERVYEHFVQENGIHRVQRV-P 265

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISE------SDCRIDTYRASGAGGQHVNTTDSA 249
            +S  +  TS S ++VY   ++S+  +I +      SD  I+T R+ G GGQ VN  ++ 
Sbjct: 266 VNSK-KIQTSTSVVFVYD--EESLRKKIKKKMNLKKSDLIIETKRSGGPGGQSVNKNETC 322

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGW 308
           V++ H PT + V+ Q+  SQ +N+  A   L+ KL+    Q+ +++      S K     
Sbjct: 323 VKVLHKPTNISVEVQKTSSQMQNRNMAIEALKTKLFSFYYQQEKDLFFKCRRSHKMSGDR 382

Query: 309 GRQIRSY 315
             +IRSY
Sbjct: 383 SEKIRSY 389


>gi|218670324|ref|ZP_03519995.1| peptide chain release factor-like protein [Rhizobium etli GR56]
          Length = 175

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 82/154 (53%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G KSA + + G +A     G  G  R    SP     +R   + ++       +  ++ I
Sbjct: 22  GAKSAIVNLDGLHADRIAGGYCGKIRFTFESPVRPGHKRQNWYVAVQRIQAGPEGGQVTI 81

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           + +D R  T RA G GGQH NTTDSAVR+ H PTG+VV  + ERSQH+NKA A   L A 
Sbjct: 82  NPADQRFQTLRAGGPGGQHQNTTDSAVRVLHRPTGLVVTARDERSQHRNKALALRRLEAM 141

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           L ++E +K+E   +    +   I  G +++++ L
Sbjct: 142 LRQVEAEKQEAAKSGRFIANRTIERGNEVKAFKL 175


>gi|242021553|ref|XP_002431209.1| peptide chain release factor, putative [Pediculus humanus corporis]
 gi|212516458|gb|EEB18471.1| peptide chain release factor, putative [Pediculus humanus corporis]
          Length = 413

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 49/345 (14%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  L+D ++  + +SF+  +++  +   N +E K +   R  +D      KEI+   C+ 
Sbjct: 51  LSDLYDNESMKKYISFI--ESDHVNFSDNFLEKKYIEEIRHSIDKK----KEIE---CEI 101

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L  +  EE    IL    D  +  ++E+                     +    GG E
Sbjct: 102 LALNTVNSEE---KILPHNFDGGEESQIEIH--------------------IFPAVGGEE 138

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           ++ +A  L  MY  +   + +     EI    + G     L ++G   Y  L  E GVHR
Sbjct: 139 AKYFAEELFNMYVNYIIYKNWNCIRAEIKQDTKVG----HLTLQGNTIYNSLICEAGVHR 194

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +   R HTS  S+ ++    ++ EI I+  D  I+T R+ G GGQ+VN  ++ 
Sbjct: 195 VQRVPETEKFGRTHTSTCSLNIFQKSLNN-EIIINPKDIIIETLRSGGPGGQNVNKVETR 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIG 307
           VRI HIPTG++++ Q+ R Q++NK +A+  L++ L    L   E+  N  + +  K + G
Sbjct: 254 VRIKHIPTGLIIESQESRYQYENKIKAFKKLQSTL----LNMYEDKINSSKKATLKDQTG 309

Query: 308 ---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFM 347
              +  +IR+Y       + D R N    +    L G  +LDD +
Sbjct: 310 NNDYSDKIRTYNFNQ-NRITDHRINYSLYNMDAFLSGGKELDDMI 353


>gi|124511698|ref|XP_001348982.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
 gi|23498750|emb|CAD50820.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
          Length = 352

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 10/132 (7%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I++SD  I T R+ G GGQ+VN  ++AVRI H PT + V+   ER+Q  NK  A   +  
Sbjct: 221 INKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKRIYE 280

Query: 283 KLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           KL  L+ +    K+ E+AN     K+   +G QIR+YVL   +M+KD RTN+  T    V
Sbjct: 281 KLLYLQTEALKNKKYELAN-----KSLTHFGEQIRNYVLYGNKMIKDTRTNVFSTDIDKV 335

Query: 339 L-DGDLDDFMKA 349
           L  G++D F+ A
Sbjct: 336 LYQGEIDIFIDA 347



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 5/106 (4%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIKSATL 170
           N   L + +G GGTE+ D+ NML  MY ++      ++  K E ++I   E  GIK   +
Sbjct: 50  NSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNE-VGIKKVEI 108

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
            I G  ++     E+G+HRLVR SP+++ +++ TSF  + V P ++
Sbjct: 109 KIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTSFVKVDVIPTLN 154


>gi|322829249|gb|EFZ32717.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 476

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 29/232 (12%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           LEED  S+L +   N+      V  ++ ES  +  + S    LEV   AGG E+  +A+ 
Sbjct: 158 LEEDMESLLNQVR-NMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFASE 216

Query: 137 LLRMYTRWAEK-RKFKTEALE-----------------------IHDGEEAGIKSATLLI 172
           L  MY  ++   R ++ E  E                              G+K   +  
Sbjct: 217 LAEMYREYSTGVRNWRIEEAENGAGGGGGGAAGGGGGGDASALSAPALASTGVKFKAI-- 274

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  L+ E GVH++ R+   D + +  TS + + + PV+ D + + + E+DC+I+ 
Sbjct: 275 -GDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVL-DPVSVNVHENDCKIEF 332

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            R SG GGQ + ++ +AV +THIP+G+ V+C Q RS   NK  A  ++  +L
Sbjct: 333 VRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL 384


>gi|46190861|ref|ZP_00121023.2| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 115

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 1/102 (0%)

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG
Sbjct: 1   MRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWG 59

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +
Sbjct: 60  DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGI 101


>gi|261884219|ref|ZP_06008258.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 115

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 68/114 (59%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           + N +   K ++  + D   L ELA  EDD   +    ++ Q ++ ++   +   +LSGE
Sbjct: 2   ISNMLCKFKNVKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            DS +A + +H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+
Sbjct: 62  DDSKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGL 115


>gi|325114215|emb|CBZ49772.1| putative peptide chain release factor 1 [Neospora caninum
           Liverpool]
          Length = 489

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 66/260 (25%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF---------------KTEALEI 157
           ++N A +E+   AGG E+Q WA  L  MYTR+ E +K                K+ AL+ 
Sbjct: 197 NANVAIVEIRPAAGGEEAQLWATDLAEMYTRFFELQKTWRFAQLQLAGPNAGSKSPALQR 256

Query: 158 HD---------------------------GEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            D                           G   G+      ++GP  Y  L  E GVHR+
Sbjct: 257 RDDAAPARRKSRAGSSRPTSKEEERNAVSGALGGVTCIAFRVEGPGVYRQLLKESGVHRV 316

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++ +     F  +             + E+D  I T R+SG GGQ+VN  ++AV
Sbjct: 317 QRVPRTETQN-----FQGVA------------LDEADLVIRTARSSGCGGQNVNKVETAV 359

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWG 309
            + H PTG+ + CQQER+Q  NK  A  +L   L +L  +  EE+   + E  + ++  G
Sbjct: 360 DLLHAPTGIRIFCQQERTQAANKKAAKEIL---LKKLAARHEEEVVQQMREERREQVCSG 416

Query: 310 RQIRSYVLQPYQMVKDLRTN 329
             +RS  ++ Y   +D R N
Sbjct: 417 --LRSERVRTYNF-RDGRVN 433


>gi|332878808|ref|ZP_08446523.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683159|gb|EGJ56041.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 235

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           +++ AG G  E Q     +L+++ + A ++      +   +G+    IKS T+ +KG   
Sbjct: 6   IQITAGRGPLECQWVVAKVLKVFLQEATQKGIDYTIVSREEGDANLTIKSVTVQLKGKEL 65

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIE-ISESDCRIDTYRA 235
             +LK   G    V  S +    +R     S W   V + D ++ +  SE D +  T R+
Sbjct: 66  SAFLKSWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQSFSERDVQFQTTRS 120

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  +SAVR TH+PTGV V  Q  RSQ  NK  A N LR KL E+ELQ+  E 
Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGVSVFAQDSRSQLDNKKLALNRLREKLAEIELQQLAEQ 180

Query: 296 ANIGESSKTEIGWGRQIRSY 315
           A    ++ T++  G  +R++
Sbjct: 181 AQNHWNNHTQVQRGNPVRTF 200


>gi|60682199|ref|YP_212343.1| peptide chain release factor-like protein [Bacteroides fragilis
           NCTC 9343]
 gi|60493633|emb|CAH08422.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
          Length = 206

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 4/168 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    R A+KRK + E LE   G     + S  + ++G  
Sbjct: 5   YLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVALEGAG 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                   +G    +  SPY  + RR   F  +  + + +     E +E D R +T RAS
Sbjct: 65  CDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESC---EATEDDIRYETLRAS 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL
Sbjct: 122 GPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKL 169


>gi|325267596|ref|ZP_08134248.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324980946|gb|EGC16606.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 202

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-- 175
           YL++  G    E Q +A   LR   R AE      E L      + G++SA + + G   
Sbjct: 3   YLQLSTGQAPAECQYFARFALRQMLREAEAAGLDVEILS-ETPSKHGLRSAVVAVSGSLQ 61

Query: 176 --NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
              A  WL    G  + V  SP+  N  R   F ++   P      E    E + R +T 
Sbjct: 62  DNFAQRWL----GTLQWVCASPFRPNHARKNWFVAVSRLPDFPALPE----EGEVRFETC 113

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           RA G GGQHVN T+SAVR  H  TG+ V+ + ERSQH NK +A  +L  KL
Sbjct: 114 RAGGKGGQHVNKTESAVRAVHTATGISVRVESERSQHANKKRALELLAVKL 164


>gi|82538743|ref|XP_723804.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23478225|gb|EAA15369.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 358

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 28/242 (11%)

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKF----KTEALEIHDGEEAGI-KSATLLIKGPNAY 178
           G GG E++ +AN L  MY  + + + +    K   L I +G+  GI K+    IKG   Y
Sbjct: 106 GVGGQEAKMFANELFSMYEHFCKLKNYECLIKNNKL-IEEGK--GIYKNIVADIKGEGVY 162

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY--PVVDDSIE--IEISESDCRIDTYR 234
                E G+HR+ RI P +S  +  TS S + ++      + +E  ++I +++  I+T R
Sbjct: 163 IDFIQEIGIHRVQRI-PINS-KKMQTSTSIVLLFDEKQTKEKLEKKMKIPKNEFLIETKR 220

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           + GAGGQ VN  ++ V+I H PT + V+ Q+  SQ +NK+ A  M++ KLY    +  +E
Sbjct: 221 SGGAGGQSVNKNETCVKIIHKPTNIFVEVQKTSSQIQNKSIAMEMIKNKLYNFYYE--QE 278

Query: 295 IANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             N  +  K +   G    +IR+Y    +  V D   N++ T         +D F K T 
Sbjct: 279 KINFLKDKKNQKQNGDRSEKIRTYNF-SHNTVIDHIANVQYTG--------IDQFFKGTQ 329

Query: 352 AI 353
            I
Sbjct: 330 LI 331


>gi|254472541|ref|ZP_05085940.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
 gi|211958005|gb|EEA93206.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
          Length = 212

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 1/125 (0%)

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           A + SA + + G  A  + K   G  +    SP+  N +R   F  ++  PV   +   E
Sbjct: 53  ANVASAEVTLAGEGAKTFAKAWCGTIKWTCQSPFRPNHKRQNWFIGVYELPV-SAAEAGE 111

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
            +  D R +T RA G GGQH N T+SAVR+TH+PTG+ V  + ERSQH+NK  A   L+ 
Sbjct: 112 FNAEDLRFETLRAGGPGGQHQNKTESAVRVTHVPTGLSVVARDERSQHRNKQIALQRLQE 171

Query: 283 KLYEL 287
           KL  L
Sbjct: 172 KLSGL 176


>gi|53714002|ref|YP_099994.1| peptide chain release factor-like protein [Bacteroides fragilis
           YCH46]
 gi|253567006|ref|ZP_04844457.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764352|ref|ZP_06092920.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52216867|dbj|BAD49460.1| putative peptide chain release factor [Bacteroides fragilis YCH46]
 gi|251944130|gb|EES84639.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263256960|gb|EEZ28306.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301163677|emb|CBW23231.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 206

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 4/168 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    R A+KRK + E LE   G     + S  + ++G  
Sbjct: 5   YLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVALEGAG 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                   +G    +  SPY  + RR   F  +  + + +     E +E D R +T RAS
Sbjct: 65  CDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESR---EATEDDIRYETLRAS 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL
Sbjct: 122 GPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKL 169


>gi|118581948|ref|YP_903198.1| class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
 gi|118504658|gb|ABL01141.1| Class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
          Length = 109

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 52/77 (67%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E D RI+ YRASG GGQH NTTDSAVRI H+PTG+V Q  + RSQ +N+ +A   L
Sbjct: 5   VEIREEDIRIEYYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQSRNRERAMERL 64

Query: 281 RAKLYELELQKREEIAN 297
            A L + E   ++ IA 
Sbjct: 65  TAALEKRERVVKKRIAT 81


>gi|148264585|ref|YP_001231291.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
 gi|146398085|gb|ABQ26718.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
          Length = 108

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 57/79 (72%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + +EI ESD +I+ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+  A +
Sbjct: 1   MAMEIKESDIKIEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREVAMH 60

Query: 279 MLRAKLYELELQKREEIAN 297
            L+  L + E + ++ +A+
Sbjct: 61  RLQEALLKRERKVKKRVAS 79


>gi|39996074|ref|NP_952025.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982839|gb|AAR34298.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens
           PCA]
 gi|298505090|gb|ADI83813.1| hydrolase, putative [Geobacter sulfurreducens KN400]
          Length = 107

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 8/104 (7%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I ++D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+ +A   L
Sbjct: 3   VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62

Query: 281 RAKLYELELQKREEIANIGESSKTE--------IGWGRQIRSYV 316
           R  L + E + ++ IA        E        +G  +++RS V
Sbjct: 63  RIALEKRERKAKKRIATTVPRGAREKRLTEKKLVGMKKKLRSTV 106


>gi|68076525|ref|XP_680182.1| peptide chain release factor 1 [Plasmodium berghei strain ANKA]
 gi|56501082|emb|CAH94168.1| peptide chain release factor 1, putative [Plasmodium berghei]
          Length = 252

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 106/199 (53%), Gaps = 27/199 (13%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLL 171
           + N   +E   G GG E++ W+  L ++Y  +A K+K K +++ +I         + +L+
Sbjct: 12  NKNHIRIEFRPGIGGDEAELWSKELKKIYQSYANKKKLKVKSVKDI---------TNSLI 62

Query: 172 IKGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
           IK PN               Y   K E G H++ RI   ++  +  +S ++I ++  + +
Sbjct: 63  IKSPNDVKINKDGKEIQISLYDLFKNESGTHQVKRIPKNENKEKIQSSTATIAIF--IQN 120

Query: 218 SI-EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            I + EI+  D +I T+R+S  GGQ+VN  +SAVRI H  TG+  +  +ER+Q  NK  A
Sbjct: 121 YINKYEINLKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESHEERTQELNKKIA 180

Query: 277 WNMLRAKLYELELQKREEI 295
              L  K+++L+ +++EE 
Sbjct: 181 MKRLTQKIHDLQNREKEEF 199


>gi|294668973|ref|ZP_06734059.1| putative peptide chain release factor H [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308965|gb|EFE50208.1| putative peptide chain release factor H [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 205

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 5/169 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL++    G  E + +A  +L+     AE R  K E +     ++ GI SA L+++G  A
Sbjct: 3   YLQISTAQGPAECRIFARFVLKKLLAEAEARNVKAE-IAGETADKHGILSAVLILEGAAA 61

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +  QG  + V  SP      R   +  I+  P   +  E+  SES+    T R+ G
Sbjct: 62  DTLAQSWQGTLQWVCASPVRPKHPRKNWYIGIFRLP---EKPEMP-SESEIEFQTCRSGG 117

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK +A  +L  K+ E
Sbjct: 118 KGGQHVNKTESAVRATHKASGISVRVESERSQHANKKRALELLAYKMAE 166


>gi|255009670|ref|ZP_05281796.1| peptide chain release factor-like protein [Bacteroides fragilis
           3_1_12]
 gi|313147455|ref|ZP_07809648.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
 gi|313136222|gb|EFR53582.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 207

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 12/172 (6%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL-----I 172
           YL++ +G G  E      ++L    + A+ RK K E +E    +EAG  + TLL     +
Sbjct: 6   YLQITSGRGPVECCRVVALVLERILKQAQTRKLKVEIVE----KEAGPANRTLLSAVIAL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G      ++  +G    +  SPY  + RR   F  +  + + +     E +E++ R +T
Sbjct: 62  EGAGCDTLVEEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESR---EATENEIRYET 118

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            RASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL
Sbjct: 119 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKL 170


>gi|146301198|ref|YP_001195789.1| peptide chain release factor-like protein [Flavobacterium
           johnsoniae UW101]
 gi|146155616|gb|ABQ06470.1| Class I peptide chain release factor [Flavobacterium johnsoniae
           UW101]
          Length = 229

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 6/173 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177
           +++ AG G  E       +L+     A+ +      L+   GEE G I++A++ +KG NA
Sbjct: 5   IQITAGRGPAECTWVVAQVLKKVLEEAQDQNLDVVLLQREKGEENGTIETASISVKGKNA 64

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSIEIEISESDCRIDTYRAS 236
             ++K   G  + +  S +    +R   F  I+ + P  + S+    SE+D +    R+S
Sbjct: 65  DQFVKSWIGTIQWIGQSQFRKMHKRKNWFIGIFEIEPQKNASV----SENDIQYQAMRSS 120

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           GAGGQHVN   SA+R THIPTG+ V     RSQH+NK  A   L  KL + +L
Sbjct: 121 GAGGQHVNKVSSAIRATHIPTGIAVVAMDSRSQHQNKKLATERLLKKLEDEKL 173


>gi|156086270|ref|XP_001610544.1| peptide chain release factor 1 [Babesia bovis T2Bo]
 gi|154797797|gb|EDO06976.1| peptide chain release factor 1, putative [Babesia bovis]
          Length = 276

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 26/191 (13%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           A +    +E+  G GGTE+  WA  L + + ++ + +K   +        E  I S  +L
Sbjct: 16  ATNAQVVVEIRPGVGGTEANTWAQELAKAFKKFCQNKKCNVK--------EENIGSIIIL 67

Query: 172 -IKGPNAYGWLKG----------EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----- 215
            I+G +      G          E G+H++ R+   +   R H+S +++ V P       
Sbjct: 68  HIQGDDDKFRENGCTGLEERFLREAGIHQVKRVPTSEKAGRMHSSTATVAVLPTELTKAK 127

Query: 216 --DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D   +I I   D    T R+SGAGGQ+VN  ++A  +TH PTG+ ++ Q+ER+Q KNK
Sbjct: 128 YEDILAKIVIDPRDIEWKTCRSSGAGGQNVNKVETAAALTHKPTGIRIESQEERTQSKNK 187

Query: 274 AQAWNMLRAKL 284
             A   L+ +L
Sbjct: 188 EIALEKLKIQL 198


>gi|315497766|ref|YP_004086570.1| peptide chain release factor h [Asticcacaulis excentricus CB 48]
 gi|315415778|gb|ADU12419.1| peptide chain release factor H [Asticcacaulis excentricus CB 48]
          Length = 208

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 9/200 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL--IKGPN 176
           L + +G G  E       L R +TR A K     E   I+ GEE     A+LL  + G  
Sbjct: 6   LHLTSGKGPDECCWVVAQLSRAFTREALKDGVACEV--INSGEEL---PASLLMSVTGDQ 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A  ++    G  + +  SP+    +R   F  + + P  D   ++   + D    T RAS
Sbjct: 61  AQAFVSARVGTIQWIGDSPFRPRHKRRNWFVGVNIAPSPDAMPDLR--DEDIVFQTMRAS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR TH  TG+VV  Q++RSQH N+  A   L   L E   +  +   
Sbjct: 119 GPGGQHVNKTDSAVRATHRSTGLVVTAQEQRSQHANRKLARQKLAVLLDEQRQKASDSAR 178

Query: 297 NIGESSKTEIGWGRQIRSYV 316
            +  S+   +  G+ +R+Y 
Sbjct: 179 QVQWSAHQNLERGKSVRTYT 198


>gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 270

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 1/111 (0%)

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G + Y  L+ E GVH++ R+   D + +  TS + + + PV+D  + + + E+DC+I+  
Sbjct: 69  GDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVLD-PVSVNVHENDCKIEFV 127

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R SG GGQ + ++ +AV +THIP+G+ V+C Q RS   NK  A  ++  +L
Sbjct: 128 RGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL 178


>gi|260596640|ref|YP_003209211.1| putative peptide chain release factor [Cronobacter turicensis
           z3032]
 gi|260215817|emb|CBA28276.1| Putative peptide chain release factor homolog [Cronobacter
           turicensis z3032]
          Length = 240

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 6/133 (4%)

Query: 155 LEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
           +E   G  AG ++SA + ++G NA    +   G  + +  SPY     R   F    V+ 
Sbjct: 75  IEEEPGPRAGTLRSALVSLEGENAQPLAQRWCGTLQWICESPYRPRHARKNWFIGAAVFT 134

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            V D     + +SD R D  RASG GGQHVN TDSA+R TH+ +G+ V+ Q ERSQH NK
Sbjct: 135 PVGD-----MPQSDIRFDALRASGPGGQHVNKTDSAIRATHVASGISVKVQSERSQHANK 189

Query: 274 AQAWNMLRAKLYE 286
             A  ++  KL E
Sbjct: 190 RLATLLIAHKLEE 202


>gi|270659693|ref|ZP_06222357.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
 gi|270316971|gb|EFA28651.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
          Length = 170

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 59/101 (58%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + YLE+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + +
Sbjct: 49  DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKV 108

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            G   YG LK E G HR+ R+   +S  R HTS  ++ V P
Sbjct: 109 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMP 149


>gi|149197233|ref|ZP_01874285.1| putative peptide chain release factor 2 [Lentisphaera araneosa
           HTCC2155]
 gi|149139779|gb|EDM28180.1| putative peptide chain release factor 2 [Lentisphaera araneosa
           HTCC2155]
          Length = 125

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 5/87 (5%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V P  D+++  E     C+   +RASGAGGQHVNTTDSAVR+ H PTG+VVQ  + RSQ
Sbjct: 12  YVIPTEDEALFRE-----CQFSAFRASGAGGQHVNTTDSAVRLVHFPTGLVVQSSESRSQ 66

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIA 296
           H+N+      LR  L     ++++ +A
Sbjct: 67  HRNREICLKKLRQSLVMAGRKRKKRVA 93


>gi|222056398|ref|YP_002538760.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
 gi|221565687|gb|ACM21659.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
          Length = 108

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 55/77 (71%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E+D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+  A + L
Sbjct: 3   MEIKETDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQAAENRSQWQNRELAMSRL 62

Query: 281 RAKLYELELQKREEIAN 297
           +  L + E + ++ IA 
Sbjct: 63  QQALIKRERKTKKRIAT 79


>gi|228472445|ref|ZP_04057207.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276130|gb|EEK14877.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 231

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           +++ AG G  E Q     +L+ + + A +       L   +G+    +KS TL +KG   
Sbjct: 6   IQITAGRGPLECQWVVAKVLKTFLQEATQAGISYTILSREEGDANLTVKSVTLQLKGKEL 65

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEI-SESDCRIDTYRA 235
             +LK   G    V  S +    +R     S W   V + D ++ ++ SE D +  T R+
Sbjct: 66  ASFLKTWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQLFSERDVQFQTTRS 120

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+  E 
Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQLAEQ 180

Query: 296 ANIGESSKTEIGWGRQIRSY 315
           A    ++ T++  G  +R++
Sbjct: 181 AQNHWNNHTQVQRGNPVRTF 200


>gi|89093039|ref|ZP_01165990.1| peptide chain release factor 2 [Oceanospirillum sp. MED92]
 gi|89082689|gb|EAR61910.1| peptide chain release factor 2 [Oceanospirillum sp. MED92]
          Length = 207

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 8/110 (7%)

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           QGV   +  SP+    +R   F S  VY + +++ + EI+   CR     ASGAGGQHVN
Sbjct: 74  QGVLLWICQSPFRPKHKRKNWFFSGQVYEIAEETNDGEITYQTCR-----ASGAGGQHVN 128

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           TTDSAVR TH+ +G+ V+ + ERSQH NK  A  ++  KL E   Q REE
Sbjct: 129 TTDSAVRATHVSSGISVRVESERSQHANKRLAKLLILQKLAE---QVREE 175


>gi|50122538|ref|YP_051705.1| peptide chain release factor-like protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613064|emb|CAG76515.1| putative peptide chain release factor [Pectobacterium atrosepticum
           SCRI1043]
          Length = 207

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 14/182 (7%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174
           L++ A  G  E        L   TR A ++  + E +E   G+ AG ++SA +L+ G   
Sbjct: 4   LQLSAAQGPDECMLATAKALHALTRDAARQGIECEIIETEVGKRAGTLRSALVLLNGEQA 63

Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P A  W     G  +    SP+     R       W   V     E   ++ + R +T 
Sbjct: 64  EPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGVARFHQEQAFADDEIRFETT 114

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  
Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174

Query: 294 EI 295
           E+
Sbjct: 175 EL 176


>gi|326334366|ref|ZP_08200579.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325693450|gb|EGD35376.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 233

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           +++ AG G  E Q     +L+++ + A +       L   +G+    +KS T+ +KG   
Sbjct: 6   IQITAGRGPLECQWVVAKVLKVFLQEATQAGISYTILSREEGDANLTVKSVTVQLKGKEL 65

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIE-ISESDCRIDTYRA 235
             +LK   G    V  S +    +R     S W   V + D ++ +  SE D +  T R+
Sbjct: 66  AAFLKTWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQPFSECDVQFQTTRS 120

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+  E 
Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKFALARLKEKLIEIELQQLSEQ 180

Query: 296 ANIGESSKTEIGWGRQIRSY 315
           A    ++ T++  G  +R++
Sbjct: 181 AQSHWNNHTQVQRGNPVRTF 200


>gi|239835036|ref|ZP_04683364.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239823099|gb|EEQ94668.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 136

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 5/128 (3%)

Query: 190 LVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           LV  SP     +R   F S+     P ++D   I I  +D R +T RA G GGQH NT+D
Sbjct: 10  LVFKSPVRPQHKRQHWFISVSRIARPAIND---IVIQPNDVRFETLRAGGPGGQHQNTSD 66

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+ +  + ERSQH+NKA A   L   L  L+  + E    +       I 
Sbjct: 67  SAVRVVHIPTGIQLIARNERSQHRNKATALERLEMVLKHLQEDEIENAEAVRHHENRNIE 126

Query: 308 WGRQIRSY 315
            G +++++
Sbjct: 127 RGNEVKTF 134


>gi|261822834|ref|YP_003260940.1| peptide chain release factor-like protein [Pectobacterium wasabiae
           WPP163]
 gi|261606847|gb|ACX89333.1| peptide chain release factor H [Pectobacterium wasabiae WPP163]
          Length = 207

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 14/182 (7%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174
           L++ A  G  E        L+   R A ++  ++E +E   G+ AG ++SA +L+ G   
Sbjct: 4   LQLSAAQGPDECMLATAKALQALIRDAARQGIESEIIETEAGKRAGTLRSALVLLNGEQA 63

Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P A  W     G  +    SP+     R       W   +     E   ++++ R +T 
Sbjct: 64  EPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGIARFHQERAFADNEIRFETT 114

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  
Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174

Query: 294 EI 295
           E+
Sbjct: 175 EL 176


>gi|322419681|ref|YP_004198904.1| Class I peptide chain release factor [Geobacter sp. M18]
 gi|320126068|gb|ADW13628.1| Class I peptide chain release factor [Geobacter sp. M18]
          Length = 106

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI ESD +++ YRASG GGQH NTTDSAVRI H+PTG+V Q  + RSQ +N+ +A   L
Sbjct: 2   VEIKESDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQAQNREKALERL 61


>gi|213963016|ref|ZP_03391275.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
 gi|213954357|gb|EEB65680.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
          Length = 230

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           +++ AG G  E Q     +L+ + + A +       L   +G+    +KS TL +KG   
Sbjct: 6   IQITAGRGPLECQWVVAKVLKTFLQEAAQAGIDYTILSREEGDANLTVKSVTLQLKGKEL 65

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIE-ISESDCRIDTYRA 235
             +LK   G    V  S +    +R     S W   V + D ++ +  SE D +  T R+
Sbjct: 66  APFLKTWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQTFSERDVQFQTTRS 120

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+  E 
Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQLAEQ 180

Query: 296 ANIGESSKTEIGWGRQIRSY 315
           A    ++ T++  G  +R++
Sbjct: 181 AQSHWNNHTQVQRGNPVRTF 200


>gi|313226924|emb|CBY22069.1| unnamed protein product [Oikopleura dioica]
          Length = 394

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           ++  A   V AGAGG E+  +A  LL  Y  + E   +  E +   D E   +    +++
Sbjct: 118 EAEKANFVVEAGAGGDEAGIFARELLDHYLLFFEFMNWDYEQVN-RDEENGMLTEGHIVV 176

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NA+     E GVHR+ RI P ++ ++ HTS  ++ V P+++  + I+I E +  I +
Sbjct: 177 SGLNAFNRNLAEAGVHRVARI-PQNA-TKLHTSTCAVKVTPILERRL-IDIPEKELDISS 233

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE--LQ 290
            R SG GGQ +NT  +   + HIP+G+     +     +N   A N+ +AK  EL   LQ
Sbjct: 234 CRGSGKGGQKINTVHARAVVKHIPSGITTTYFE---PGRNNTLAANIEKAK-EELRSILQ 289

Query: 291 KRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
            R+      E      S  T    G +IR+Y      +V D RT
Sbjct: 290 ARQDAEFEREFLGFKNSMNTNFERGERIRNYSWSN-NIVTDYRT 332


>gi|12322377|gb|AAG51209.1|AC051630_6 peptide chain release factor, putative; 8726-9996 [Arabidopsis
           thaliana]
          Length = 255

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR  L
Sbjct: 98  CRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154


>gi|30692851|ref|NP_174601.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|12322576|gb|AAG51290.1|AC027035_13 unknown protein [Arabidopsis thaliana]
 gi|26450075|dbj|BAC42157.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|29824307|gb|AAP04114.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|332193463|gb|AEE31584.1| Class I peptide chain release factor [Arabidopsis thaliana]
          Length = 257

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR  L
Sbjct: 98  CRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154


>gi|297851766|ref|XP_002893764.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339606|gb|EFH70023.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 256

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR  L
Sbjct: 97  CRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 153


>gi|224538378|ref|ZP_03678917.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520007|gb|EEF89112.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 205

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 4/168 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           Y+++ +G G  E      ++L    + A  +  KTE +E   G     + SA + ++G +
Sbjct: 5   YMQITSGRGPAECCRVVALVLEKILKQAVAKGVKTEIVERETGPLNRTLLSAVISLQGGD 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  ++  +G  + +  SPY    +R   F  +  + + +     E +E++ R +T RAS
Sbjct: 65  YHALIEDWEGSVQWIAQSPYRIYHKRKNWFVGVQTFTLSESQ---EATEAEIRYETLRAS 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQHVN T+SAVR  HIPTG+ V    +RSQ +NK  A   L  KL
Sbjct: 122 GPGGQHVNKTESAVRAVHIPTGMSVVASDQRSQWQNKKLATERLLLKL 169


>gi|298386489|ref|ZP_06996045.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
 gi|298260866|gb|EFI03734.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
          Length = 206

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    R A+    K E +E   G     + SAT+ ++G  
Sbjct: 6   YLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG-T 64

Query: 177 AYGWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           A G L  E +G  + +  SPY    +R   F  +  + + +     E +E D R +T RA
Sbjct: 65  ASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQ---EATERDFRYETLRA 121

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           SG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL
Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKL 170


>gi|126737179|ref|ZP_01752914.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
 gi|126721764|gb|EBA18467.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
          Length = 213

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G KSA +L+ G  A  + K  +G  +    S      +R   F  ++  P    + E  I
Sbjct: 52  GYKSAVVLVSGAEAEAFAKNWRGTIQWRAQSNLRPKHKRANWFIGVFDLPASVRTPE-RI 110

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             SD  +DT+RA G GGQH NTTDSAVR TH PTG+    ++ERSQH+NKA A   L
Sbjct: 111 QASDVILDTFRAGGPGGQHQNTTDSAVRATHRPTGLSAVAREERSQHRNKALALERL 167


>gi|238022850|ref|ZP_04603276.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
 gi|237865658|gb|EEP66796.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
          Length = 206

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 82/174 (47%), Gaps = 15/174 (8%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL++  G    E Q +A  +LR   R AE      E L      + GI SA   + G  A
Sbjct: 3   YLQLSTGQSPAECQIFAQFVLRKILREAEAAGVAAELLS-QTASKHGILSAVFALSGAGA 61

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDT 232
               +   G  + +  SP      R   +  ++  P +     DDSI         R +T
Sbjct: 62  EDLAQRWLGTLQWIGNSPVRPKHPRKNWYIGVFRLPQIPALPDDDSI---------RFET 112

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            RA G GGQHVN TDSAVR TH+ TGV V+ + ERSQH NK +A  +L  KL E
Sbjct: 113 CRAGGKGGQHVNKTDSAVRATHLATGVSVRVESERSQHANKKRARELLALKLAE 166


>gi|302761444|ref|XP_002964144.1| hypothetical protein SELMODRAFT_405853 [Selaginella moellendorffii]
 gi|300167873|gb|EFJ34477.1| hypothetical protein SELMODRAFT_405853 [Selaginella moellendorffii]
          Length = 330

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 49/161 (30%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L SG  D   A + + AGAGGT+ Q                              E
Sbjct: 141 QLIKLFSGTYDKERARITITAGAGGTDVQ------------------------------E 170

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           A IKSATL I         +GE+G HRLV   P+++ + R TSF+ + V  +++++ EIE
Sbjct: 171 AEIKSATLEID--------RGEKGTHRLVLCVPFNAKALRQTSFAGVEVTALLEEN-EIE 221

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           +           + G GGQ++N  ++AVR+THIPTG+ ++C
Sbjct: 222 VE----------SGGKGGQNLNKVETAVRVTHIPTGIALRC 252


>gi|329848554|ref|ZP_08263582.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
 gi|328843617|gb|EGF93186.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
          Length = 208

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 5/204 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L + +G G  E       L + +TR   ++    + L   D  EA   S  L + G  A 
Sbjct: 6   LHISSGKGPDECCWVVTKLAQAFTREGAEQGVTCDVL---DAGEALPASLLLSVSGEAAP 62

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            +++   G  + V  SP+    +R   F  + + P      ++   ESD    T RASG 
Sbjct: 63  AFVRERIGTIQWVGDSPFRPLHKRRNWFVGVALAPSPQSVPDLR--ESDITFSTMRASGP 120

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN TDSAVR  H PTG+V   Q++RSQH N+  A   L   L E  ++   +    
Sbjct: 121 GGQHVNKTDSAVRAVHRPTGLVATAQEQRSQHANRKLATLKLALMLEERRVEAGGQARRD 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQM 322
             S+   +  G  +R+Y+   +++
Sbjct: 181 QWSAHQALERGNPVRTYIGPHFKL 204


>gi|253572326|ref|ZP_04849729.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838101|gb|EES66189.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 206

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    R A+    K E +E   G     + SAT+ ++G  
Sbjct: 6   YLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQGA- 64

Query: 177 AYGWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           A G L  E +G  + +  SPY    +R   F  +  + + +     E +E D R +T RA
Sbjct: 65  ASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQ---EATERDFRYETLRA 121

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           SG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL
Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKL 170


>gi|227112372|ref|ZP_03826028.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 207

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 14/182 (7%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174
           L++ A  G  E        L   TR A ++    E +E   G+ AG ++SA +L+ G   
Sbjct: 4   LQLSAAQGPDECMLATTKALHALTRDAARQGVNCEIIETEAGKRAGTLRSALVLLNGEQA 63

Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P A  W     G  +    SP+     R       W   V     E   ++ + R +  
Sbjct: 64  EPLAANWC----GTLQWTCNSPWRKGGGRKN-----WFIGVARFHQEQAFADHEIRFEAT 114

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  
Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174

Query: 294 EI 295
           E+
Sbjct: 175 EL 176


>gi|29346864|ref|NP_810367.1| peptide chain release factor-like protein [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29338761|gb|AAO76561.1| putative peptide chain release factor [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 206

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    R A+    K E +E   G     + SAT+ ++G  
Sbjct: 6   YLQITSGRGPAECCRVVALVLERIVRQAQASGLKMEMIEREVGPVNRTLLSATIALQGA- 64

Query: 177 AYGWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           A G L  E +G  + +  SPY    +R   F  +  + + +     E +E D R +T RA
Sbjct: 65  ASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQ---EATERDFRYETLRA 121

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           SG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL
Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKL 170


>gi|71032615|ref|XP_765949.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68352906|gb|EAN33666.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 216

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 16/132 (12%)

Query: 175 PNAYG----WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----------VDDSIE 220
           PN  G    +L+ E GVH++ R+   + + R H+S +++ V P            +D +E
Sbjct: 37  PNTEGLEDRFLR-EGGVHQVKRVPMTEKSGRMHSSTATVAVLPSEMAKGRGTNNFEDVLE 95

Query: 221 -IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +EI+ SD    T RASG GGQ+VN  ++AV + H PTG+ V+C +ERSQ KNK  A   
Sbjct: 96  AVEINPSDIEWKTCRASGPGGQNVNKVETAVSLYHKPTGIKVECSEERSQGKNKELALKK 155

Query: 280 LRAKLYELELQK 291
           LR ++  + +++
Sbjct: 156 LREEIARIRIEE 167


>gi|227325964|ref|ZP_03829988.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 207

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 14/182 (7%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174
           L++ A  G  E        L+  TR A ++  + E +E   G+ +G ++SA +L+ G   
Sbjct: 4   LQLSAAQGPDECMLATAKALQALTRDAARQGIECEVIETEAGKRSGTLRSALVLLNGEQA 63

Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P A  W     G  +    SP+     R       W   +     E   ++++ R +  
Sbjct: 64  EPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGIARFHQEQAFADNEIRFEAT 114

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  
Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174

Query: 294 EI 295
           E+
Sbjct: 175 EL 176


>gi|315254830|gb|EFU34798.1| PCRF domain protein [Escherichia coli MS 85-1]
          Length = 210

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 54/93 (58%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
            G   YG LK E G HR+ R+   +S  R HTS
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 199


>gi|323964709|gb|EGB60180.1| peptide chain release [Escherichia coli M863]
          Length = 200

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 54/93 (58%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K     I
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
            G   YG LK E G HR+ R+   +S  R HTS
Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 199


>gi|319637886|ref|ZP_07992652.1| peptide chain release factor H [Neisseria mucosa C102]
 gi|317401041|gb|EFV81696.1| peptide chain release factor H [Neisseria mucosa C102]
          Length = 206

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 2/169 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL++    G  E + +A  +L      A+ +    E L     ++ GI SATL ++G  A
Sbjct: 3   YLQISTAQGPAECRIFARFVLGKLLAEAQAKGIDAE-LVTETADKHGILSATLKLEGQKA 61

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +  QG  + +  SP      R   +  ++  P +  + E+  SE+     T R+ G
Sbjct: 62  ESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQTYEMP-SENGIEFQTCRSGG 120

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E
Sbjct: 121 KGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAE 169


>gi|149919721|ref|ZP_01908199.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
 gi|149819492|gb|EDM78922.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
          Length = 311

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 20/237 (8%)

Query: 55  AISFIK--EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGE 111
           A++F K  E++ +L +   LL      DD  + +    +++ +  +VE  + E + L   
Sbjct: 49  AMAFAKLVELERQLGETRELL------DDPDMRELAQADVRELGGQVEDAETELTRLLTP 102

Query: 112 ADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
            D NDA    LE+ AG GG E+  +   L RMY R++E+ ++  + +E  +    G K  
Sbjct: 103 KDPNDAKNVILEIRAGTGGDEAGLFVADLWRMYNRFSERHRWAIDQVEFSENSAGGFKEI 162

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           T  ++G  A+  LK E+GVHR+ R+   +S  R HTS +++ + P    S    I  +  
Sbjct: 163 TGRVQGKGAWAQLKFERGVHRVQRVPATESQGRIHTSTATVAIMPEPRTSTSTSIPRTSS 222

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT--GVVVQCQQERSQHKNKAQAWNMLRAK 283
                RA+ AG    +T+   +R    P   G  V+C Q RS  +N A +   LR++
Sbjct: 223 SRPCARAARAG----STSTPRLRGPPAPQAHGHRVRCDQ-RSPAQN-ASSHEALRSR 273


>gi|159900504|ref|YP_001546751.1| ATPase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893543|gb|ABX06623.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1027

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 151/351 (43%), Gaps = 28/351 (7%)

Query: 3    LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
            L +QLN +        A +R + L  +   P  W +  +A+ L+ E  ++   +    ++
Sbjct: 693  LIKQLNVV-------EARERQTELMDEMSSPSFWDDHEQAQFLLTELSNVARRVGRCDDL 745

Query: 63   QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +    D   LL+   E ++  +  E     +R++ ++ + + E L S   D +DAY+ + 
Sbjct: 746  RRLYDDADQLLQRIRERNERRLFPELMRMAKRLERDLRFAELEMLFSNPEDWHDAYIILE 805

Query: 123  AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            +   G     W   L   Y  W+  ++F+ + ++    E+  I+  TL I G  A+G L+
Sbjct: 806  SDQAGLR---WVRNLANAYLEWSLGKRFEAKVIDETPAEDNLIR-VTLQISGSGAFGLLR 861

Query: 183  GEQGVHRLVRISPYDSNSRRHT-SFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
             E G HR   IS      R  T +   I V PV  +D+     S+ +  +   RA G   
Sbjct: 862  SEAGTHR---ISETGGEPRLKTVTQVQITVLPVPTEDTPAPASSDIEMAVMNTRADGYFL 918

Query: 241  QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
            + +  T  A+   H  +G              +A    +L   L  L +++ ++     +
Sbjct: 919  RKLRVTGRAI---HRYSGAAAFA----CAGSERAVREMLLSILLGRLAMKQLDDFIQPSD 971

Query: 301  SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +     WG  +RSY L     +KD RT I  T+P   L G+LD F++A L
Sbjct: 972  DA-----WGSVVRSYHLGKRSTIKDPRTEIVHTNPKAALAGELDLFIEAAL 1017


>gi|261379932|ref|ZP_05984505.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
 gi|284797642|gb|EFC52989.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
          Length = 212

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 2/169 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL++    G  E + +A  +L      A+ +    E L     ++ GI SATL ++G  A
Sbjct: 9   YLQISTAQGPAECRIFARFVLGKLLAQAQAKGIDAE-LVTETADKHGILSATLKLEGQKA 67

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +  QG  + +  SP      R   +  ++  P +    E+  SE+     T R+ G
Sbjct: 68  ESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQMYEMP-SENGIEFQTCRSGG 126

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E
Sbjct: 127 KGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAE 175


>gi|253700800|ref|YP_003021989.1| class I peptide chain release factor [Geobacter sp. M21]
 gi|251775650|gb|ACT18231.1| Class I peptide chain release factor [Geobacter sp. M21]
          Length = 105

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 5/77 (6%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q  + RSQ +N+ +A    
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAME-- 58

Query: 281 RAKLYELELQKREEIAN 297
             +L EL L++RE+ A 
Sbjct: 59  --RLAEL-LRRREQKAK 72


>gi|197118419|ref|YP_002138846.1| hydrolase [Geobacter bemidjiensis Bem]
 gi|197087779|gb|ACH39050.1| hydrolase, putative [Geobacter bemidjiensis Bem]
          Length = 105

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 5/76 (6%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q  + RSQ +N+ +A    
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAME-- 58

Query: 281 RAKLYELELQKREEIA 296
             +L EL L++RE+ A
Sbjct: 59  --RLAEL-LRRREQKA 71


>gi|326201214|ref|ZP_08191086.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782]
 gi|325988782|gb|EGD49606.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782]
          Length = 205

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 4/171 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ +G G  E +   ++ L+ +     K + K   ++   GE +G   + LL    + 
Sbjct: 2   WIQISSGKGPVECELAVSLFLKAFENECNKNQIKINIIDAVPGEISGNYKSVLLSLDCSE 61

Query: 178 YGWLKG-EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           +  +   + G    +  SPY  N +R   F ++ V+ + D   ++   E D R ++ R+S
Sbjct: 62  HQVIDNIKSGTVLWICKSPYRPNHKRKNWFINVDVFQIPD---KLSFCEKDVRFESMRSS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           G GGQ+VN  ++AVR  H+PTG+    ++ERSQ+ NK  A   L   + E+
Sbjct: 119 GPGGQNVNKVETAVRAIHLPTGLTATAREERSQYMNKKLALCRLSNLIREM 169


>gi|189426554|ref|YP_001953731.1| class I peptide chain release factor [Geobacter lovleyi SZ]
 gi|189422813|gb|ACD97211.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
          Length = 107

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 5/89 (5%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + IEI+E+D R++ YRASG GGQH NTTDSAVRI H+PTG+VV   + RSQ +N+  A  
Sbjct: 1   MSIEINETDIRVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVHAAENRSQLRNREVAME 60

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG 307
            LR     L L+KR  +     ++K   G
Sbjct: 61  RLR-----LALEKRNRVEKKRMATKVPKG 84


>gi|300775389|ref|ZP_07085251.1| probable peptide chain release factor H [Chryseobacterium gleum
           ATCC 35910]
 gi|300506129|gb|EFK37265.1| probable peptide chain release factor H [Chryseobacterium gleum
           ATCC 35910]
          Length = 232

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 4/198 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177
           +++ +G G  E Q  A  +L+ +   A++     E +   +G+E   +KS T+L+KG   
Sbjct: 5   IQITSGRGPLECQWVAAKVLKTFLEEAKQNTIDYEIIHRENGDENLTLKSVTILLKGKEI 64

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             +LK   G       S +    +R   F  I+    +++   I+ +E D R  T R+ G
Sbjct: 65  NLFLKNWLGTVCWTGKSTFRKLHKRSNWFIGIFE---LENVKMIDFNEKDIRFQTARSQG 121

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           +GGQ+VN  ++AVR THIPT   V  Q  RSQ +NK ++   L+ K+  + +Q+ E    
Sbjct: 122 SGGQNVNKVNTAVRATHIPTNETVFVQDSRSQLENKKRSVIRLKEKVMAVYIQQLERKMK 181

Query: 298 IGESSKTEIGWGRQIRSY 315
              S + ++  G  +R++
Sbjct: 182 DTWSLQMQVERGNPVRTF 199


>gi|17548920|ref|NP_522260.1| peptide chain release factor-like protein [Ralstonia solanacearum
           GMI1000]
 gi|17431170|emb|CAD17850.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum GMI1000]
          Length = 207

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 6/135 (4%)

Query: 151 KTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + E LE  DGE  G ++SA + ++G       +  +G  +    SPY     R       
Sbjct: 36  RVEVLEQEDGEHPGTLRSALVSLEGDAEAAVAQRWEGTIQWTCPSPYRPRHARKN----- 90

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           W + V   +       S+ R +T RASG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQ
Sbjct: 91  WFFGVARCAAPAATLPSEIRFETARASGPGGQHVNKTESAVRAIHLATGISVKVQTERSQ 150

Query: 270 HKNKAQAWNMLRAKL 284
           H NK  A  +L  KL
Sbjct: 151 HANKRLAVLLLAHKL 165


>gi|70936414|ref|XP_739155.1| peptide release factor [Plasmodium chabaudi chabaudi]
 gi|56515938|emb|CAH84701.1| peptide release factor, putative [Plasmodium chabaudi chabaudi]
          Length = 210

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 20/189 (10%)

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY--PVVDDSIE--IEISESD 227
           IKG   Y     E G+HR+ RI P +S  +  TS S + ++      + +E  ++I ++D
Sbjct: 8   IKGEGVYVDFIQEIGIHRVQRI-PINS-KKMQTSTSIVLLFDEKQTKEKLEKKMKIPKND 65

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
             I+T R+ GAGGQ VN  ++ V+ITH PT + V+ Q+  SQ +NK+ A +M++ KLY  
Sbjct: 66  FIIETKRSGGAGGQSVNKNETCVKITHKPTNIFVEVQKTSSQIQNKSIAMDMIKNKLYNF 125

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             +  +E  N  +  K +   G    +IR+Y    +  V D   N++ T         +D
Sbjct: 126 YYE--QEKMNFLKDKKNQKQNGDRSEKIRTYNF-SHNTVIDHIANVQYTG--------ID 174

Query: 345 DFMKATLAI 353
            F K T  I
Sbjct: 175 QFFKGTQLI 183


>gi|300770278|ref|ZP_07080157.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762754|gb|EFK59571.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 232

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 20/210 (9%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG 174
           D  + V AG G  E       +++   + A     + + L+  +G   G + SA+L I G
Sbjct: 2   DKIIGVTAGRGPEECSWVVAQVIKKIIQEAPTFDVEVQVLDRQEGSINGTVISASLKISG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF--------SSIWVYPVVDDSIEIEISES 226
            N   +     G  + +  S +  + +R   F        S+ W++ V            
Sbjct: 62  ENCMAFSALWTGTIQWIGKSDFRKSHKRKNWFIEVFEIKPSASWIFDV-----------K 110

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R    R+SGAGGQHVN   SAVR TH+PTGV V     RSQH+NK  A   L+ K+ E
Sbjct: 111 DIRYQAMRSSGAGGQHVNKVSSAVRATHMPTGVSVVAMDSRSQHQNKKIATERLQTKVNE 170

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYV 316
           L L   +E       ++ ++  G  IR++V
Sbjct: 171 LNLLHWKENEKYKWFNQIQVERGNAIRTFV 200


>gi|71027353|ref|XP_763320.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68350273|gb|EAN31037.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 299

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 30/163 (18%)

Query: 106 SLLSGEADSNDAY---LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK-----TEALEI 157
           SL SG   + + +   L+V  G GG ES  +A  L  MY         K        LEI
Sbjct: 115 SLFSGSLHTLNYHKILLQVLQGVGGEESGKFAAELYDMYANICNLNNLKHIKHPNNTLEI 174

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR-HTSFSSIWVYPVVD 216
             G +                   + E GVHR+ R+ P+  NSRR  TS + + V P  +
Sbjct: 175 FQGLDR-----------------FRYEFGVHRVQRV-PF--NSRRIQTSSAVVTVVPHFN 214

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
              +I I  SD  ++T R+SG+GGQ VN +++AVRITHIPTG+
Sbjct: 215 VE-DINIKSSDLMVETMRSSGSGGQSVNKSETAVRITHIPTGI 256


>gi|156305180|ref|XP_001617535.1| hypothetical protein NEMVEDRAFT_v1g157388 [Nematostella vectensis]
 gi|156194391|gb|EDO25435.1| predicted protein [Nematostella vectensis]
          Length = 80

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           LRAKLYE+E+ KR   A   E SK +IGWG QIRSYVL   Q +KDLRT ++ ++   VL
Sbjct: 6   LRAKLYEMEMMKRNAAAQELEDSKADIGWGSQIRSYVLDD-QRIKDLRTGVQTSNCDRVL 64

Query: 340 DGDLDDFMKATL 351
           DG+LD F++A+L
Sbjct: 65  DGELDMFIEASL 76


>gi|301344980|ref|ZP_07225721.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513510|ref|ZP_07238747.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597421|ref|ZP_07242429.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 127

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 6/109 (5%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +  E 
Sbjct: 1   HINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATS--EM 58

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +  +G G    +IR+Y   P   + D R N+       +++GDL + +
Sbjct: 59  RRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 106


>gi|225076746|ref|ZP_03719945.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
 gi|224951914|gb|EEG33123.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
          Length = 212

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL++    G  E + +A  +L      A+ +    E L     ++ GI SATL ++G   
Sbjct: 9   YLQISTAQGPAECRIFARFVLGKLLAEAQVKGIDAE-LVTETADKHGILSATLKLEGQKT 67

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +  QG  + +  SP      R   +  ++  P +    E+  SE+     T R+ G
Sbjct: 68  ESLAQTWQGTLQWICPSPIRPKHPRKNWYIGVFRLPDMPQRYEMP-SENGIEFQTCRSGG 126

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E
Sbjct: 127 KGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAE 175


>gi|10092253|gb|AAG12666.1|AC027033_1 peptide chain release factor, putative; 62597-62246 [Arabidopsis
           thaliana]
          Length = 88

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 52/80 (65%)

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NKA A  +L++ L +LE+ ++  +      S TEI WG QIR+YVL  Y+MVKDLRTN E
Sbjct: 2   NKASAMAVLQSWLDQLEMARQTSVNAQHTRSLTEISWGNQIRTYVLHQYRMVKDLRTNYE 61

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            + P  VL+GDLD F+   L
Sbjct: 62  VSDPDSVLEGDLDGFISKLL 81


>gi|282890772|ref|ZP_06299292.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499365|gb|EFB41664.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 118

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 6/89 (6%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           + I++ P+ DD ++      +C +  +RA G+GGQHVN TDSAVR+TH PTG+V+ CQ  
Sbjct: 2   AKIFLPPLDDDLLK------ECTMTAFRARGSGGQHVNVTDSAVRLTHNPTGIVITCQVH 55

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEI 295
           RSQH NK +    LR ++     +K + +
Sbjct: 56  RSQHLNKKECLVKLREEVERRNYRKPKRV 84


>gi|207724424|ref|YP_002254821.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
 gi|206589645|emb|CAQ36606.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
          Length = 207

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 6/171 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177
           L+  +  G  E +      L    R + +   + E +E  DGE AG ++SA + ++G   
Sbjct: 4   LQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGEHAGTLRSALVSLEGDAE 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +  +G  +    SPY     R       W + V   +       S+ R +T RASG
Sbjct: 64  ADIAQRWEGTIQWTCPSPYRPRHARKN-----WFFGVARCAAPAVTLPSEIRFETTRASG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  +L   E
Sbjct: 119 PGGQHVNKTESAVRAVHVATGISVKVQTERSQHANKRLAVLLLAHRLASHE 169


>gi|255067533|ref|ZP_05319388.1| putative peptide chain release factor H [Neisseria sicca ATCC
           29256]
 gi|255048154|gb|EET43618.1| putative peptide chain release factor H [Neisseria sicca ATCC
           29256]
          Length = 219

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 5/211 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL++    G  E + +A  +L      A+    + E +     ++ G+ SA L + G +A
Sbjct: 14  YLQISTAQGPAECRIFARFVLGRLLAEAKAESVEAEIIS-ETADKHGMMSAVLKLDGKHA 72

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +  QG  + +  SP      R   +  ++  P + D      SES+    + R+ G
Sbjct: 73  ETLAQRWQGSLQWICASPVRPKHPRKNWYIGVFRMPDMPDMP----SESEIEFQSCRSGG 128

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    + +  A 
Sbjct: 129 KGGQHVNKTESAVRATHKASGISVRVESERSQHANKKLALTLLTQKLAEHHAGQTDNYAR 188

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
              S   ++  G   R++    ++   D ++
Sbjct: 189 AQHSRLYQVERGNPKRTFAGTEFKEKPDAKS 219


>gi|300693607|ref|YP_003749580.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
 gi|299075644|emb|CBJ34941.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
          Length = 207

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 69/135 (51%), Gaps = 6/135 (4%)

Query: 151 KTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + E +E  DGE  G ++SA + ++G       +  +G  +    SPY     R       
Sbjct: 36  RVEVIEQEDGERPGTLRSALVSLEGDAEAAAAQRWEGTIQWTSPSPYRPRHARKN----- 90

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           W + V   +       S+ R +T R+SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQ
Sbjct: 91  WFFGVARCATPAVTLPSEIRFETTRSSGPGGQHVNKTESAVRAIHMATGISVKVQTERSQ 150

Query: 270 HKNKAQAWNMLRAKL 284
           H NK  A  +L  KL
Sbjct: 151 HANKRLAVLLLAHKL 165


>gi|69249982|ref|ZP_00605073.1| PCRF [Enterococcus faecium DO]
 gi|68194043|gb|EAN08594.1| PCRF [Enterococcus faecium DO]
          Length = 139

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 52/79 (65%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE D ++ +E    +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +ML
Sbjct: 49  EEPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSML 108

Query: 138 LRMYTRWAEKRKFKTEALE 156
           LRMYTRWAE+  ++ E L+
Sbjct: 109 LRMYTRWAEQHGYQVETLD 127


>gi|332885245|gb|EGK05496.1| peptide chain release factor H [Dysgonomonas mossii DSM 22836]
          Length = 206

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 10/175 (5%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
           +N  YL++ +G G  E      ++L    + A + K + E LE   GE    + SA + +
Sbjct: 2   NNKIYLQITSGRGPAECCRAVALVLEKILKQARELKLEAEVLEREQGEINRTLFSAIISL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G      +   +GV +    SPY    +R   F        V      E+S+ D +  T
Sbjct: 62  EGNKIDEIVNEWEGVIQWTAQSPYRIYHKRKNWFVG------VKSFTPSELSDVDMKYIT 115

Query: 233 Y---RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           Y   R+SGAGGQHVN T++AVR  H P+G+ V    +RSQH+NK  A   L  KL
Sbjct: 116 YQTLRSSGAGGQHVNKTETAVRAIHNPSGLSVIASDQRSQHQNKKLATERLLVKL 170


>gi|302791615|ref|XP_002977574.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
 gi|300154944|gb|EFJ21578.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
          Length = 207

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 4/65 (6%)

Query: 221 IEISESD----CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +SE D    C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q  ++RSQH+N+  A
Sbjct: 38  LRMSERDLVAQCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRDSA 97

Query: 277 WNMLR 281
              LR
Sbjct: 98  VQRLR 102


>gi|167553099|ref|ZP_02346849.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205322360|gb|EDZ10199.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 204

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKTLDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A 
Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|290475750|ref|YP_003468639.1| putative peptide chain release factor [Xenorhabdus bovienii
           SS-2004]
 gi|289175072|emb|CBJ81875.1| putative peptide chain release factor (modular protein)
           [Xenorhabdus bovienii SS-2004]
          Length = 205

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++S  + I+G N   + +   G  + +  SP+     R   F  +  +  +      +I 
Sbjct: 51  LRSVMVAIQGENEQQFFERWDGTIKWICASPWRKGDGRKNWFIGVAQFKPLQ-----QIM 105

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ES+ R +T RASG GGQHVN T+SA+R  HI +G+ V+ Q ERSQH N+  A  +L  +L
Sbjct: 106 ESEIRFETLRASGPGGQHVNKTESAIRAVHIASGISVKVQSERSQHANRRLACLLLEHRL 165


>gi|294949753|ref|XP_002786323.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239900543|gb|EER18119.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 423

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 39/274 (14%)

Query: 77  LEEDDCSILQ----ETSDNLQRIKLEVEYKQFESL---LSGEA-----------DSNDAY 118
           LE +D S+      E    L++I +E+E + F+ L   +S E            D++D  
Sbjct: 98  LERNDISMKSMFNAEVDSQLEKI-IEIENRLFDHLHTRMSNEGIDCATWHAYVKDASDCT 156

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKS--ATLLIKG- 174
           +E+  G GG E+  W   +  M  R+A    +    +++ + G ++G +   A   +K  
Sbjct: 157 VEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKVMEQGWQSGYRQIIADFFLKPG 216

Query: 175 ------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI--EISES 226
                    +G+LK E G+HR+ R+  + ++S   TS  S+ V P  D +  +   +   
Sbjct: 217 VKRTPEKGIFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLKPH 276

Query: 227 DCRI-DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           + ++  T ++SG GGQ VN    AVRI HI +GV       R+   NKA A   +  K+ 
Sbjct: 277 EYKVWITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQKIM 336

Query: 286 ELELQKREEIAN-IGESSKTEIGWG---RQIRSY 315
           E   +K ++IA   G   K  +G G    +IRSY
Sbjct: 337 E---EKGKKIAKERGIIRKQHMGSGDRSEKIRSY 367


>gi|16759310|ref|NP_454927.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16763697|ref|NP_459312.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142917|ref|NP_806259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|62178886|ref|YP_215303.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161615515|ref|YP_001589480.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167993332|ref|ZP_02574427.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168232270|ref|ZP_02657328.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168465389|ref|ZP_02699271.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168819094|ref|ZP_02831094.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194443695|ref|YP_002039557.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194472201|ref|ZP_03078185.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|198241865|ref|YP_002214270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389746|ref|ZP_03216357.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207855800|ref|YP_002242451.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213025683|ref|ZP_03340130.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213161389|ref|ZP_03347099.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213416713|ref|ZP_03349857.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213425142|ref|ZP_03357892.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213649630|ref|ZP_03379683.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213852433|ref|ZP_03381965.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|224582156|ref|YP_002635954.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|289826861|ref|ZP_06545771.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25513287|pir||AI0542 probable peptide chain release factor prfH [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16418816|gb|AAL19271.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501601|emb|CAD08785.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138549|gb|AAO70119.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62126519|gb|AAX64222.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364879|gb|ABX68647.1| hypothetical protein SPAB_03287 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402358|gb|ACF62580.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194458565|gb|EDX47404.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|195631774|gb|EDX50294.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197936381|gb|ACH73714.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602191|gb|EDZ00737.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205328589|gb|EDZ15353.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333479|gb|EDZ20243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205344152|gb|EDZ30916.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|206707603|emb|CAR31885.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224466683|gb|ACN44513.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245540|emb|CBG23335.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992008|gb|ACY86893.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301156930|emb|CBW16412.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911285|dbj|BAJ35259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320084570|emb|CBY94362.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224975|gb|EFX50036.1| Peptide chain release protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713338|gb|EFZ04909.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323128632|gb|ADX16062.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622014|gb|EGE28359.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332987265|gb|AEF06248.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 204

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A 
Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|238913295|ref|ZP_04657132.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
          Length = 204

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYIGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A 
Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|300697304|ref|YP_003747965.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074028|emb|CBJ53565.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
          Length = 210

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 6/171 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177
           L+  +  G  E +      L    R + +   + E +E  DGE AG ++SA + ++G   
Sbjct: 7   LQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGECAGTLRSALVSLEGDAE 66

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +  +G  +    SPY     R       W + V   +       S+ R +T RASG
Sbjct: 67  ADVAQRWEGTIQWTCPSPYRPRHARKN-----WFFGVARCAAPAVTLPSEIRFETTRASG 121

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  +L   E
Sbjct: 122 PGGQHVNKTESAVRAIHVATGISVKVQTERSQHANKRLAVLLLAHRLANHE 172


>gi|197248567|ref|YP_002145297.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|204927397|ref|ZP_03218599.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|197212270|gb|ACH49667.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|204324062|gb|EDZ09257.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 204

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S + ++   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEQMQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A 
Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|15799941|ref|NP_285953.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           EDL933]
 gi|15829517|ref|NP_308290.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. Sakai]
 gi|82775830|ref|YP_402177.1| peptide chain release factor-like protein [Shigella dysenteriae
           Sd197]
 gi|168750219|ref|ZP_02775241.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|168757264|ref|ZP_02782271.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|168763477|ref|ZP_02788484.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|168770034|ref|ZP_02795041.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|168776124|ref|ZP_02801131.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|168782997|ref|ZP_02808004.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|168789709|ref|ZP_02814716.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|168800326|ref|ZP_02825333.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|195938639|ref|ZP_03084021.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208806453|ref|ZP_03248790.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208812358|ref|ZP_03253687.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208821267|ref|ZP_03261587.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209398288|ref|YP_002268863.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|217325768|ref|ZP_03441852.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254791396|ref|YP_003076233.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261223709|ref|ZP_05937990.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261255882|ref|ZP_05948415.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281080|ref|YP_003497898.1| putative peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|309786024|ref|ZP_07680653.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|12513007|gb|AAG54561.1|AE005201_14 probable peptide chain release factor [Escherichia coli O157:H7
           str. EDL933]
 gi|13359720|dbj|BAB33686.1| probable peptide chain release factor [Escherichia coli O157:H7
           str. Sakai]
 gi|81239978|gb|ABB60688.1| probable peptide chain release factor [Shigella dysenteriae Sd197]
 gi|187768441|gb|EDU32285.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|188015585|gb|EDU53707.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|188999642|gb|EDU68628.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|189355734|gb|EDU74153.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|189361064|gb|EDU79483.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|189366361|gb|EDU84777.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|189370775|gb|EDU89191.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|189377360|gb|EDU95776.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|208726254|gb|EDZ75855.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208733635|gb|EDZ82322.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208741390|gb|EDZ89072.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209159688|gb|ACI37121.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|209745314|gb|ACI70964.1| probable peptide chain release factor [Escherichia coli]
 gi|209745316|gb|ACI70965.1| probable peptide chain release factor [Escherichia coli]
 gi|209745318|gb|ACI70966.1| probable peptide chain release factor [Escherichia coli]
 gi|209745320|gb|ACI70967.1| probable peptide chain release factor [Escherichia coli]
 gi|209745322|gb|ACI70968.1| probable peptide chain release factor [Escherichia coli]
 gi|217321989|gb|EEC30413.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254590796|gb|ACT70157.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|290760953|gb|ADD54914.1| Probable peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|308926135|gb|EFP71613.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|320190210|gb|EFW64860.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320638171|gb|EFX07920.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. G5101]
 gi|320643253|gb|EFX12452.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. 493-89]
 gi|320648900|gb|EFX17518.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. H 2687]
 gi|320660248|gb|EFX27758.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320665014|gb|EFX32124.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. LSU-61]
 gi|326338757|gb|EGD62576.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1044]
 gi|326342456|gb|EGD66236.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1125]
          Length = 166

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + + +SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRPSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 125 -WKLEQQQQENSA 136


>gi|302786792|ref|XP_002975167.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
 gi|300157326|gb|EFJ23952.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
          Length = 411

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 4/65 (6%)

Query: 221 IEISESD----CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +SE D    C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q  ++RSQH+N+  A
Sbjct: 38  LRMSERDLVAQCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRESA 97

Query: 277 WNMLR 281
              LR
Sbjct: 98  VQRLR 102


>gi|168240054|ref|ZP_02664986.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194449085|ref|YP_002044299.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197263075|ref|ZP_03163149.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|194407389|gb|ACF67608.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197241330|gb|EDY23950.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205339954|gb|EDZ26718.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 204

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A 
Sbjct: 119 PGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|294894730|ref|XP_002774927.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239880702|gb|EER06743.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 272

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 17/210 (8%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D  +E+  G GG E+  W   +  M  R+A    +    +++    E G+K      
Sbjct: 17  DASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKVM---EQGVKRTPE-- 71

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI--EISESDCRI 230
           KG   +G+LK E G+HR+ R+  + ++S   TS  S+ V P  D +  +   +   + ++
Sbjct: 72  KG--IFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLKPHEYKV 129

Query: 231 -DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
             T ++SG GGQ VN    AVRI HI +GV       R+   NKA A   +  K+ E   
Sbjct: 130 WITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQKIME--- 186

Query: 290 QKREEIAN-IGESSKTEIGWG---RQIRSY 315
           +K ++IA   G   K  +G G    +IRSY
Sbjct: 187 EKGKKIAKERGIIRKQHMGSGDRSEKIRSY 216


>gi|213610056|ref|ZP_03369882.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 204

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 9/162 (5%)

Query: 138 LRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L   T+ A + K     LE   G     ++SA + + G  A  + +   G    +  SPY
Sbjct: 23  LDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSPY 82

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
             +  R       W   +   S +  I   + R +T R+SG GGQHVN TDSAVR TH+ 
Sbjct: 83  RPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLA 137

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A +
Sbjct: 138 SGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAAL 176


>gi|78222830|ref|YP_384577.1| class I peptide chain release factor [Geobacter metallireducens
           GS-15]
 gi|78194085|gb|ABB31852.1| Class I peptide chain release factor [Geobacter metallireducens
           GS-15]
          Length = 107

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 43/61 (70%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           IEI+E+D + + YR SG GGQH N T+S VRI H+PTGVVVQ  + RSQ +N+  A   L
Sbjct: 2   IEINEADLKFEFYRGSGPGGQHRNVTESGVRIRHVPTGVVVQACESRSQARNREIALERL 61

Query: 281 R 281
           R
Sbjct: 62  R 62


>gi|224127830|ref|XP_002329188.1| predicted protein [Populus trichocarpa]
 gi|222870969|gb|EEF08100.1| predicted protein [Populus trichocarpa]
          Length = 257

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 42/57 (73%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           C +DT++ASG GGQH N  +SAVR+ H+PTG++ Q  ++RSQH N+A A   LRA L
Sbjct: 102 CEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHMNRASALKRLRALL 158


>gi|119513510|ref|ZP_01632531.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119461826|gb|EAW42842.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 66

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 38/48 (79%)

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E  WG QIR+YV  PYQMVKDLRTN+E T+ SDV+DGDLD F++A L
Sbjct: 7   VEASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYL 54


>gi|168261270|ref|ZP_02683243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205349709|gb|EDZ36340.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 204

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 9/179 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A
Sbjct: 119 PGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECA 174


>gi|213855686|ref|ZP_03383926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 78

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%)

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++AKLYELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VL
Sbjct: 4   MKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVL 62

Query: 340 DGDLDDFMKATL 351
           DG LD F++A+L
Sbjct: 63  DGSLDQFIEASL 74


>gi|170728229|ref|YP_001762255.1| peptide chain release factor H [Shewanella woodyi ATCC 51908]
 gi|169813576|gb|ACA88160.1| peptide chain release factor H [Shewanella woodyi ATCC 51908]
          Length = 218

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 20/149 (13%)

Query: 185 QGVHRLVRISPYD-----SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           QG    +  SP+        ++R   F S  +Y   +  ++ E+S   CR     ASGAG
Sbjct: 79  QGAMLWICQSPFQLEKNRVKNKRKNWFFSGQMYEFNETELDKEVSFQTCR-----ASGAG 133

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI 298
           GQHVNTTDSAVR  H+ TG+ V+ + ERSQH NK     + RA L++ LE  K E+++ +
Sbjct: 134 GQHVNTTDSAVRAIHVATGISVRVESERSQHANK----RLARALLFQKLESTKVEQMS-L 188

Query: 299 GESSKTEIGW----GRQIRSYVLQPYQMV 323
            E ++ +  W    G  ++++  + + +V
Sbjct: 189 QEKARWQQHWEVERGNPVKTFKGEKFTLV 217


>gi|296392334|ref|ZP_06881809.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAb1]
          Length = 204

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY +   R   F     +     S+E EI     R +T R+SG GGQHVNTTDSAVR T
Sbjct: 80  SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134

Query: 254 HIPTGVVVQCQQERSQHKNK 273
           H+ +G+ V+ Q +RSQH NK
Sbjct: 135 HLASGISVRVQSQRSQHANK 154


>gi|56414557|ref|YP_151632.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363487|ref|YP_002143124.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128814|gb|AAV78320.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094964|emb|CAR60501.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 204

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN +DSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A 
Sbjct: 119 PGGQHVNKSDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|107104573|ref|ZP_01368491.1| hypothetical protein PaerPA_01005652 [Pseudomonas aeruginosa PACS2]
          Length = 207

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY +   R   F     +     S+E EI     R +T R+SG GGQHVNTTDSAVR T
Sbjct: 83  SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 137

Query: 254 HIPTGVVVQCQQERSQHKNK 273
           H+ +G+ V+ Q +RSQH NK
Sbjct: 138 HLASGISVRVQSQRSQHANK 157


>gi|15600663|ref|NP_254157.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAO1]
 gi|254237846|ref|ZP_04931169.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|254243022|ref|ZP_04936344.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
 gi|9951802|gb|AAG08855.1|AE004959_11 probable peptide chain release factor [Pseudomonas aeruginosa PAO1]
 gi|126169777|gb|EAZ55288.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|126196400|gb|EAZ60463.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
          Length = 204

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY +   R   F     +     S+E EI     R +T R+SG GGQHVNTTDSAVR T
Sbjct: 80  SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134

Query: 254 HIPTGVVVQCQQERSQHKNK 273
           H+ +G+ V+ Q +RSQH NK
Sbjct: 135 HLASGISVRVQSQRSQHANK 154


>gi|116053620|ref|YP_793947.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115588841|gb|ABJ14856.1| putative peptide chain release factor [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 204

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY +   R   F     +     S+E EI     R +T R+SG GGQHVNTTDSAVR T
Sbjct: 80  SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134

Query: 254 HIPTGVVVQCQQERSQHKNK 273
           H+ +G+ V+ Q +RSQH NK
Sbjct: 135 HLASGISVRVQSQRSQHANK 154


>gi|242059479|ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
 gi|241930860|gb|EES04005.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 41/54 (75%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           C + T++ASG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+A A + LR
Sbjct: 99  CDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRASALSRLR 152


>gi|46446182|ref|YP_007547.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399823|emb|CAF23272.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 118

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 50/70 (71%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C++ T+R+SG+GGQH+N T+SAVR+TH PTG+VV  Q  RSQ++NK      LR  + 
Sbjct: 17  AECQVQTFRSSGSGGQHINVTNSAVRLTHFPTGIVVSSQTFRSQYRNKQNCLAKLRQTVE 76

Query: 286 ELELQKREEI 295
           +L  ++ + I
Sbjct: 77  KLNYRQPKRI 86


>gi|218894572|ref|YP_002443442.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           LESB58]
 gi|218774801|emb|CAW30619.1| probable peptide chain release factor [Pseudomonas aeruginosa
           LESB58]
          Length = 204

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY +   R   F     +     S+E EI     R +T R+SG GGQHVNTTDSAVR T
Sbjct: 80  SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134

Query: 254 HIPTGVVVQCQQERSQHKNK 273
           H+ +G+ V+ Q +RSQH NK
Sbjct: 135 HLASGISVRVQSQRSQHANK 154


>gi|225023353|ref|ZP_03712545.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC
           23834]
 gi|224943831|gb|EEG25040.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC
           23834]
          Length = 204

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 74/156 (47%), Gaps = 5/156 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YL++    G  E Q +A   L+   R AE    + E LE     + GI SA L + G  A
Sbjct: 3   YLQISTAQGPAECQMFARFALQKILREAEAAGVEAEILE-QTPSKHGILSAVLKLSGSRA 61

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
                G QG  + V  SP      R   +  ++  P +    E E  E      T RA G
Sbjct: 62  ESLATGWQGTLQWVCPSPLRPQHPRKNWYIGVFRLPEIPALPESEGIE----FQTCRAGG 117

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            GGQHVN T+SAVR  H+ +G+ V+ + ERSQH NK
Sbjct: 118 KGGQHVNKTESAVRAVHLASGIAVRAEGERSQHANK 153


>gi|322614608|gb|EFY11537.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620127|gb|EFY16999.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623421|gb|EFY20260.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629281|gb|EFY26060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632001|gb|EFY28755.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637261|gb|EFY33963.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642458|gb|EFY39060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646289|gb|EFY42803.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652443|gb|EFY48797.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653395|gb|EFY49728.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660457|gb|EFY56693.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664609|gb|EFY60802.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669338|gb|EFY65488.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670884|gb|EFY67017.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678877|gb|EFY74932.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681906|gb|EFY77931.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322688032|gb|EFY83998.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194387|gb|EFZ79582.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197802|gb|EFZ82934.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203402|gb|EFZ88427.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323206853|gb|EFZ91806.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210378|gb|EFZ95270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214620|gb|EFZ99371.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323223176|gb|EGA07519.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224853|gb|EGA09116.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230057|gb|EGA14177.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233795|gb|EGA17884.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238511|gb|EGA22569.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244199|gb|EGA28208.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246359|gb|EGA30342.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251985|gb|EGA35848.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257982|gb|EGA41661.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323259921|gb|EGA43552.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265065|gb|EGA48564.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272628|gb|EGA56035.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 204

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G  A  + +   G    +  SPY  +  R       W   +   S + ++ 
Sbjct: 51  LRSALVSLDGEKAMAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEQMQ 105

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             + R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    
Sbjct: 106 SDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---A 162

Query: 285 YELELQKREEIANI 298
           + LE Q++ E A +
Sbjct: 163 WRLEQQRQNECAAL 176


>gi|323938779|gb|EGB35025.1| RF-1 domain-containing protein [Escherichia coli E1520]
          Length = 185

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL ++TR    +      LE   G  +  ++SA + + G NA+   +   G  + +  SP
Sbjct: 7   LLVVFTR----QDVAVTVLETETGRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSP 62

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC-RIDTYRASGAGGQHVNTTDSAVRITH 254
           Y  +  R   F  I  +         E  +SD  R +T R+SG GGQHVN TDSAVR TH
Sbjct: 63  YRPHHGRKNWFLGIGRFTA------DEQEQSDAVRYETLRSSGPGGQHVNKTDSAVRATH 116

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           + TG+ V+ Q ERSQH NK  A  ++    + LE Q++E  A +
Sbjct: 117 LATGISVKVQSERSQHANKRLARLLI---AWRLEQQQQENSAAL 157


>gi|300934927|ref|ZP_07149981.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
 gi|300459833|gb|EFK23326.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
          Length = 204

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|332829815|gb|EGK02457.1| peptide chain release factor H [Dysgonomonas gadei ATCC BAA-286]
          Length = 207

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 8/182 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      + +      A+K     E +E   GE    + SA + I+G  
Sbjct: 7   YLQITSGRGPAECGRVVALTVEKILTQAKKIGLDVEVVEREPGEINRTLFSAVISIEGLK 66

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A   ++  +G  + +  SPY    +R   F  +  + + D      + E +    T RAS
Sbjct: 67  ADEIVREWEGTIQWIAQSPYRIYHKRKNWFVGVRSFTIPDKH---NVDEREISYQTLRAS 123

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELELQKR 292
           G GGQHVN T+SAVR THI +G+ V    +RSQ +NK  A   L  KL     E  +QK 
Sbjct: 124 GPGGQHVNKTESAVRATHISSGLSVTASDQRSQLQNKKLAVERLLIKLAAWNMEQNMQKA 183

Query: 293 EE 294
           +E
Sbjct: 184 QE 185


>gi|268592903|ref|ZP_06127124.1| putative peptide chain release factor H [Providencia rettgeri DSM
           1131]
 gi|291311693|gb|EFE52146.1| putative peptide chain release factor H [Providencia rettgeri DSM
           1131]
          Length = 203

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY----PVVDDSI 219
           G+KSA + ++G NA    +   G  +    S      +R   F S+  +    P+ D  I
Sbjct: 48  GLKSALISLEGENAEILSQKWTGTIQWQCQSQIRPRHKRKNWFLSVTRFSPIKPIEDSEI 107

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E E +         +A GAGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  +
Sbjct: 108 EFEFT---------KAQGAGGQHVNKTSSAVRAKHVATGITVKVQSERSQHANKKLAKQL 158

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ++ KL E + Q+  E+      S  +I  G  + ++    ++ +K
Sbjct: 159 IQWKLNEHQSQQLNELDKQRHHSHYQIERGNAVMTFSGNEFKRLK 203


>gi|163754646|ref|ZP_02161768.1| putative peptide chain release factor [Kordia algicida OT-1]
 gi|161325587|gb|EDP96914.1| putative peptide chain release factor [Kordia algicida OT-1]
          Length = 198

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           QG  + +  SPY ++ +R   F  + VY +     +I  S  + ++ T R+SGAGGQHVN
Sbjct: 69  QGSIQFIFRSPYRAHHQRKNWFVDVKVYVM---PTQISWSPKEIQVKTARSSGAGGQHVN 125

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             ++AV + HIPTG+ VQ  +ERSQ  NK  A+  L
Sbjct: 126 KVETAVSMIHIPTGITVQASEERSQFLNKKLAFARL 161


>gi|117622538|ref|YP_851451.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
 gi|115511662|gb|ABI99736.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
          Length = 232

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 79  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 132

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 133 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 189

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 190 AWKLEQQQQENSAAL 204


>gi|149626821|ref|XP_001515177.1| PREDICTED: similar to peptide chain release factor 1, putative,
           partial [Ornithorhynchus anatinus]
          Length = 612

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 81/171 (47%), Gaps = 31/171 (18%)

Query: 129 ESQDWANMLLRMYTRWA-----EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           E+  +AN L  MY  +      +  +     LEI D           L    NA  +L  
Sbjct: 108 EAAYFANELFEMYKNFCHSTNIQNTQINQNTLEIFD-----------LGFSQNA-KYLLY 155

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----------VDDSIEI--EISESDCRID 231
           E GVHR+ RI P +SN R  TS + + V P             DS  I      SD  ++
Sbjct: 156 EFGVHRVQRI-PKNSN-RIQTSTAVVTVVPTGWSSCHGGRGSKDSPHIGDSFKPSDVIME 213

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           T R+ GAGGQ VN +++AVR+TH+PTG+ V CQ   SQ  NK+ A   ++ 
Sbjct: 214 TMRSRGAGGQSVNKSETAVRVTHVPTGMSVSCQDTSSQIDNKSLALGKVKG 264


>gi|218698820|ref|YP_002406449.1| peptide chain release factor-like protein [Escherichia coli IAI39]
 gi|218368806|emb|CAR16554.1| putative peptide chain release factor [Escherichia coli IAI39]
          Length = 166

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 125 -WKLEQQQQENSAAL 138


>gi|237707745|ref|ZP_04538226.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|306813274|ref|ZP_07447467.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|91070898|gb|ABE05779.1| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|226898955|gb|EEH85214.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|281177449|dbj|BAI53779.1| peptide chain release factor [Escherichia coli SE15]
 gi|294492701|gb|ADE91457.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli IHE3034]
 gi|305854037|gb|EFM54476.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|307628262|gb|ADN72566.1| peptide chain release factor-like protein [Escherichia coli UM146]
 gi|315287746|gb|EFU47149.1| putative peptide chain release factor H [Escherichia coli MS 110-3]
 gi|320197281|gb|EFW71897.1| peptide chain release factor-like protein [Escherichia coli
           WV_060327]
 gi|323953122|gb|EGB48990.1| RF-1 domain-containing protein [Escherichia coli H252]
 gi|323958696|gb|EGB54397.1| RF-1 domain-containing protein [Escherichia coli H263]
 gi|324010206|gb|EGB79425.1| putative peptide chain release factor H [Escherichia coli MS 57-2]
          Length = 204

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|78066331|ref|YP_369100.1| peptide chain release factor-like protein [Burkholderia sp. 383]
 gi|77967076|gb|ABB08456.1| Class I peptide chain release factor [Burkholderia sp. 383]
          Length = 204

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 6/156 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177
           +++ +  G  E Q  A   LR     A+ ++     L+   GE  G ++SA L + G  A
Sbjct: 3   MQISSAHGPLECQLAAANALRRLQAEADAQRVVVTVLDAEPGERPGTLRSALLDLDGAGA 62

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
                   G  + +  SPY     R       W   V   +    + + D R +  RA G
Sbjct: 63  QALADRWTGTLQWICASPYRLRHPRKN-----WFIGVTRCADAQPLPDGDVRFEAMRARG 117

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            GGQHVN T SA+R TH+ TG+ V+ + ERSQH NK
Sbjct: 118 PGGQHVNKTSSAIRATHVATGLSVRVESERSQHANK 153


>gi|220679233|emb|CAX12804.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 273

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 18/156 (11%)

Query: 59  IKEIQDRLCDN-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           ++++QD L DN   LLELA E +  ++L +  D  Q+                E+D ++ 
Sbjct: 127 MEDMQDLLKDNDPELLELA-ETEKEAVLADIQDLRQK----------------ESDMSEL 169

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LEV AG GG E+  +   +  MY  +A    +  + LE +  E  G++ A+  + GP +
Sbjct: 170 VLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGPLS 229

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
           Y  LK E GVHR+ R+   +S  R HTS  ++ + P
Sbjct: 230 YKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILP 265


>gi|227884748|ref|ZP_04002553.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300977367|ref|ZP_07173858.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|301045877|ref|ZP_07193064.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|331656314|ref|ZP_08357276.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331681653|ref|ZP_08382286.1| putative peptide chain release factor H [Escherichia coli H299]
 gi|26106678|gb|AAN78863.1|AE016756_46 Peptide chain release factor homolog [Escherichia coli CFT073]
 gi|222032084|emb|CAP74823.1| Peptide chain release factor homolog [Escherichia coli LF82]
 gi|227838349|gb|EEJ48815.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300302127|gb|EFJ58512.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|300409892|gb|EFJ93430.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|307552166|gb|ADN44941.1| peptide chain release factor-like protein [Escherichia coli ABU
           83972]
 gi|312944860|gb|ADR25687.1| peptide chain release factor-like protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315295160|gb|EFU54495.1| putative peptide chain release factor H [Escherichia coli MS 153-1]
 gi|315300862|gb|EFU60084.1| putative peptide chain release factor H [Escherichia coli MS 16-3]
 gi|323191394|gb|EFZ76656.1| putative peptide chain release factor H [Escherichia coli RN587/1]
 gi|331054562|gb|EGI26571.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331080855|gb|EGI52020.1| putative peptide chain release factor H [Escherichia coli H299]
          Length = 204

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|239623937|ref|ZP_04666968.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47_FAA]
 gi|239521968|gb|EEQ61834.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47FAA]
          Length = 196

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 4/122 (3%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+    RR   F  + +   + D+ E    +   R +T+ + G GGQHVN  ++ VRI 
Sbjct: 70  SPFRPEHRRKNWFIDVSILEQLPDARE----DMKLRFETFCSGGKGGQHVNKVETGVRII 125

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+ V   + RSQH NK  A N L   L ++EL+ R+    +     T +  G  +R
Sbjct: 126 HVPTGISVVSTEARSQHMNKKLAMNRLCDILADMELENRQREKELAWLEHTRLERGNPVR 185

Query: 314 SY 315
            Y
Sbjct: 186 IY 187


>gi|293403381|ref|ZP_06647472.1| prfH [Escherichia coli FVEC1412]
 gi|293408390|ref|ZP_06652229.1| peptide chain release factor H [Escherichia coli B354]
 gi|298378993|ref|ZP_06988874.1| prfH [Escherichia coli FVEC1302]
 gi|300898963|ref|ZP_07117256.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
 gi|59889806|emb|CAH19162.1| Probable peptide chain release factor [Escherichia coli]
 gi|284920069|emb|CBG33127.1| putative peptide chain release factor [Escherichia coli 042]
 gi|291429234|gb|EFF02254.1| prfH [Escherichia coli FVEC1412]
 gi|291471568|gb|EFF14051.1| peptide chain release factor H [Escherichia coli B354]
 gi|298280106|gb|EFI21610.1| prfH [Escherichia coli FVEC1302]
 gi|300357405|gb|EFJ73275.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
          Length = 204

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|303240867|ref|ZP_07327379.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2]
 gi|302591595|gb|EFL61331.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2]
          Length = 204

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ +G G  E +   ++ L+ Y    + +   T  ++   G  +G   + LL     A
Sbjct: 2   WIQISSGKGPDECELAVSLFLKSYQNECKNKGIITNVIDAIPGNISGNLKSVLLSLECQA 61

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
              L    G    +  SPY  N +R   F ++  +   +   ++  SE D   ++ R+SG
Sbjct: 62  QEEL---NGTVLWICKSPYRPNHKRKNWFINVEAFQSTE---KLNFSEKDVSFESMRSSG 115

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            GGQ+VN  +SAVR  H+PTG+ V   +ERSQ+ NK  A
Sbjct: 116 PGGQNVNKVESAVRAIHLPTGLTVTASEERSQYMNKKLA 154


>gi|170684096|ref|YP_001742396.1| peptide chain release factor-like protein [Escherichia coli
           SMS-3-5]
 gi|170521814|gb|ACB19992.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
          Length = 204

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  MRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|194432592|ref|ZP_03064878.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|194419153|gb|EDX35236.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|320178936|gb|EFW53898.1| peptide chain release factor-like protein [Shigella boydii ATCC
           9905]
 gi|332085764|gb|EGI90928.1| putative peptide chain release factor H [Shigella dysenteriae
           155-74]
 gi|332094999|gb|EGJ00038.1| putative peptide chain release factor H [Shigella boydii 5216-82]
          Length = 204

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQG 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 162 AWKLEQQQQENSA 174


>gi|253689801|ref|YP_003018991.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756379|gb|ACT14455.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 207

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 14/141 (9%)

Query: 160 GEEAG-IKSATLLIKG----PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           G+ +G ++SA +L+ G    P A  W     G  +    SP+     R       W   V
Sbjct: 45  GKRSGTLRSALVLLNGDRTEPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGV 95

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
                E   ++++ R +  ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK 
Sbjct: 96  ARFHQEQAFADNEIRFEATKSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKR 155

Query: 275 QAWNMLRAKLYELELQKREEI 295
            A  ++  +L  L+ Q+  E+
Sbjct: 156 LACYLIAYRLKALQQQQHAEL 176


>gi|191171385|ref|ZP_03032934.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300991271|ref|ZP_07179531.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|110342064|gb|ABG68301.1| putative peptide chain release factor [Escherichia coli 536]
 gi|190908319|gb|EDV67909.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300305588|gb|EFJ60108.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|324015571|gb|EGB84790.1| putative peptide chain release factor H [Escherichia coli MS 60-1]
          Length = 204

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|312964708|ref|ZP_07778959.1| putative peptide chain release factor H [Escherichia coli 2362-75]
 gi|312290729|gb|EFR18607.1| putative peptide chain release factor H [Escherichia coli 2362-75]
          Length = 204

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|161486311|ref|NP_752319.2| peptide chain release factor-like protein [Escherichia coli CFT073]
 gi|162138491|ref|YP_539310.2| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|218557192|ref|YP_002390105.1| peptide chain release factor-like protein [Escherichia coli S88]
 gi|218688128|ref|YP_002396340.1| peptide chain release factor-like protein [Escherichia coli ED1a]
 gi|218363961|emb|CAR01626.1| putative peptide chain release factor [Escherichia coli S88]
 gi|218425692|emb|CAR06484.1| putative peptide chain release factor [Escherichia coli ED1a]
          Length = 166

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 125 -WKLEQQQQENSAAL 138


>gi|193063214|ref|ZP_03044305.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194427638|ref|ZP_03060186.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|260842481|ref|YP_003220259.1| putative peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
 gi|192931122|gb|EDV83725.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194414408|gb|EDX30682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|257757628|dbj|BAI29125.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
          Length = 204

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 162 AWKLEQQQQENSA 174


>gi|293418352|ref|ZP_06660787.1| peptide chain release factor H [Escherichia coli B088]
 gi|291324880|gb|EFE64295.1| peptide chain release factor H [Escherichia coli B088]
 gi|323945388|gb|EGB41442.1| RF-1 domain-containing protein [Escherichia coli H120]
 gi|324115579|gb|EGC09518.1| RF-1 domain-containing protein [Escherichia coli E1167]
          Length = 204

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 162 AWKLEQQQQENSA 174


>gi|194438235|ref|ZP_03070327.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|253774739|ref|YP_003037570.1| peptide chain release factor-like protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160350|ref|YP_003043458.1| peptide chain release factor-like protein [Escherichia coli B str.
           REL606]
 gi|297520538|ref|ZP_06938924.1| peptide chain release factor-like protein [Escherichia coli OP50]
 gi|312970362|ref|ZP_07784543.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|194422899|gb|EDX38894.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|242376066|emb|CAQ30751.1| prfH [Escherichia coli BL21(DE3)]
 gi|253325783|gb|ACT30385.1| peptide chain release factor H [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972251|gb|ACT37922.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253976460|gb|ACT42130.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|310337011|gb|EFQ02149.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|332341589|gb|AEE54923.1| peptide chain release factor-like protein PrfH [Escherichia coli
           UMNK88]
          Length = 166

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EKE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 125 -WKLEQQQQENSAAL 138


>gi|162138281|ref|YP_668200.2| peptide chain release factor-like protein [Escherichia coli 536]
          Length = 166

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 125 -WKLEQQQQENSAAL 138


>gi|215485384|ref|YP_002327815.1| peptide chain release factor-like protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|215263456|emb|CAS07777.1| predicted peptide chain release factor [Escherichia coli O127:H6
           str. E2348/69]
          Length = 193

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|218703550|ref|YP_002411069.1| peptide chain release factor-like protein [Escherichia coli UMN026]
 gi|218430647|emb|CAR11515.1| putative peptide chain release factor [Escherichia coli UMN026]
          Length = 166

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 125 -WKLEQQQQENSAAL 138


>gi|323160301|gb|EFZ46254.1| putative peptide chain release factor H [Escherichia coli E128010]
          Length = 166

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 125 -WKLEQQQQENSA 136


>gi|260853488|ref|YP_003227379.1| putative peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|260866434|ref|YP_003232836.1| putative peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|257752137|dbj|BAI23639.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|257762790|dbj|BAI34285.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|323178470|gb|EFZ64048.1| putative peptide chain release factor H [Escherichia coli 1180]
          Length = 204

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 162 AWKLEQQQQENSA 174


>gi|407639|gb|AAD12326.1| unknown [Mycoplasma genitalium]
          Length = 113

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 6/110 (5%)

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PTG+VV CQ+ +SQ  N+ +A  MLRAKL+E    K  +++   +  K++
Sbjct: 1   TESAVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNK--QLSTQADLRKSQ 58

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G G    +IR+Y   P   + D R  +     + V+ GDLD+ ++A  A
Sbjct: 59  VGSGERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQA 107


>gi|89107109|ref|AP_000889.1| predicted peptide chain release factor [Escherichia coli str. K-12
           substr. W3110]
 gi|256024120|ref|ZP_05437985.1| peptide chain release factor-like protein [Escherichia sp. 4_1_40B]
 gi|307136901|ref|ZP_07496257.1| peptide chain release factor-like protein [Escherichia coli H736]
 gi|331640765|ref|ZP_08341900.1| putative peptide chain release factor H [Escherichia coli H736]
 gi|115311624|sp|P28369|RFH_ECOLI RecName: Full=Putative peptide chain release factor homolog;
           Short=RF-H
 gi|1552804|gb|AAB08656.1| PrfH [Escherichia coli]
 gi|85674391|dbj|BAA77905.2| predicted peptide chain release factor [Escherichia coli str. K12
           substr. W3110]
 gi|315134921|dbj|BAJ42080.1| peptide chain release factor 2 [Escherichia coli DH1]
 gi|315616801|gb|EFU97418.1| putative peptide chain release factor H [Escherichia coli 3431]
 gi|331037563|gb|EGI09783.1| putative peptide chain release factor H [Escherichia coli H736]
          Length = 166

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 125 -WKLEQQQQENSAAL 138


>gi|331651168|ref|ZP_08352193.1| putative peptide chain release factor H [Escherichia coli M718]
 gi|331050909|gb|EGI22961.1| putative peptide chain release factor H [Escherichia coli M718]
          Length = 166

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 67  QSDAIRYETQRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 123

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 124 AWKLEQQQQENSAAL 138


>gi|168238579|ref|ZP_02663637.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194735122|ref|YP_002113341.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194710624|gb|ACF89845.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288612|gb|EDY27989.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 204

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S + ++   +   +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEQMQSDEIHFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++ E A 
Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|320654680|gb|EFX22681.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
          Length = 166

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + + +SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R SG GGQHVN TD AVR TH+ TG+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRPSGPGGQHVNKTDLAVRATHLATGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 125 -WKLEQQQQENSA 136


>gi|323963546|gb|EGB59104.1| RF-1 domain-containing protein [Escherichia coli H489]
          Length = 185

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +         E  
Sbjct: 32  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEKE 85

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 86  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 142

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 143 AWKLEQQQQENSAAL 157


>gi|256020250|ref|ZP_05434115.1| peptide chain release factor-like protein [Shigella sp. D9]
 gi|332281412|ref|ZP_08393825.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
 gi|323181570|gb|EFZ66990.1| putative peptide chain release factor H [Escherichia coli 1357]
 gi|332103764|gb|EGJ07110.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
          Length = 204

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +         E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTAN------EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 162 AWKLEQQQQENSA 174


>gi|323158080|gb|EFZ44179.1| putative peptide chain release factor H [Escherichia coli EPECa14]
          Length = 166

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 125 -WKLEQQQQENSA 136


>gi|218550059|ref|YP_002383850.1| peptide chain release factor-like protein [Escherichia fergusonii
           ATCC 35469]
 gi|218357600|emb|CAQ90239.1| putative peptide chain release factor [Escherichia fergusonii ATCC
           35469]
          Length = 166

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 125 -WKLEQQQQENSAAL 138


>gi|218693719|ref|YP_002401386.1| peptide chain release factor-like protein [Escherichia coli 55989]
 gi|218350451|emb|CAU96139.1| putative peptide chain release factor [Escherichia coli 55989]
          Length = 166

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 125 -WKLEQQQQENSA 136


>gi|157156041|ref|YP_001461424.1| peptide chain release factor-like protein [Escherichia coli
           E24377A]
 gi|187732116|ref|YP_001879031.1| peptide chain release factor-like protein [Shigella boydii CDC
           3083-94]
 gi|300817246|ref|ZP_07097464.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|300823448|ref|ZP_07103578.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|307313497|ref|ZP_07593118.1| peptide chain release factor H [Escherichia coli W]
 gi|309797856|ref|ZP_07692238.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|331666568|ref|ZP_08367442.1| putative peptide chain release factor H [Escherichia coli TA271]
 gi|157078071|gb|ABV17779.1| putative peptide chain release factor H [Escherichia coli E24377A]
 gi|187429108|gb|ACD08382.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC
           3083-94]
 gi|300524066|gb|EFK45135.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|300530222|gb|EFK51284.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|306906665|gb|EFN37176.1| peptide chain release factor H [Escherichia coli W]
 gi|308118540|gb|EFO55802.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|320176701|gb|EFW51738.1| peptide chain release factor-like protein [Shigella dysenteriae CDC
           74-1112]
 gi|320185048|gb|EFW59829.1| peptide chain release factor-like protein [Shigella flexneri CDC
           796-83]
 gi|323379877|gb|ADX52145.1| peptide chain release factor H [Escherichia coli KO11]
 gi|331065792|gb|EGI37676.1| putative peptide chain release factor H [Escherichia coli TA271]
          Length = 204

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 162 AWKLEQQQQENSA 174


>gi|222100136|ref|YP_002534704.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572526|gb|ACM23338.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 160

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 2/136 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +  + + +   + L  L  K  DP +W +  +A+   ++ + L N    +K +
Sbjct: 15  LEKKFKDVLSIVNEEEVNRELKELEKKLSDPSVWDDQKKAREYTQKLKRLKNISEDLKRV 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  + +EL+  E+D  ++ +  + +Q ++  V+  + E +L+G+ D N+AYL VH
Sbjct: 75  RSLFEDLEVAIELS--EEDMDMVNQVEEIVQDLEKAVKKLELEIILNGKYDPNNAYLSVH 132

Query: 123 AGAGGTESQDWANMLL 138
            GAGGTESQDWA MLL
Sbjct: 133 PGAGGTESQDWAQMLL 148


>gi|218552840|ref|YP_002385753.1| peptide chain release factor-like protein [Escherichia coli IAI1]
 gi|218359608|emb|CAQ97149.1| putative peptide chain release factor [Escherichia coli IAI1]
          Length = 166

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 125 -WKLEQQQQENSA 136


>gi|209917447|ref|YP_002291531.1| peptide chain release factor-like protein [Escherichia coli SE11]
 gi|209910706|dbj|BAG75780.1| peptide chain release factor [Escherichia coli SE11]
          Length = 202

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 49  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 102

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 103 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 159

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 160 AWKLEQQQQENSA 172


>gi|323943355|gb|EGB39508.1| RF-1 domain-containing protein [Escherichia coli E482]
          Length = 185

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 15/164 (9%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL ++TR    +      LE   G  +  ++SA + + G NA+   +   G  + +  SP
Sbjct: 7   LLVVFTR----QDVAVTVLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSP 62

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC-RIDTYRASGAGGQHVNTTDSAVRITH 254
           Y  +  R   F  I  +         E  +SD  R +T R+SG GGQHVN TDSAVR TH
Sbjct: 63  YRPHHGRKNWFLGIGRFTA------DEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATH 116

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           + +G+ V+ Q ERSQH NK  A  ++    ++LE Q++E  A +
Sbjct: 117 LASGISVKVQSERSQHANKRLARLLI---AWKLEQQQQENSAAL 157


>gi|300929514|ref|ZP_07144981.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|300462556|gb|EFK26049.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|323972417|gb|EGB67624.1| RF-1 domain-containing protein [Escherichia coli TA007]
          Length = 178

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +         E  
Sbjct: 25  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEKE 78

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 79  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 135

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 136 AWKLEQQQQENSAAL 150


>gi|331675918|ref|ZP_08376635.1| putative peptide chain release factor H [Escherichia coli H591]
 gi|331076478|gb|EGI47755.1| putative peptide chain release factor H [Escherichia coli H591]
          Length = 232

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +         E  
Sbjct: 79  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEQE 132

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 133 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 189

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 190 AWKLEQQQQENSA 202


>gi|255556733|ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis]
 gi|223541467|gb|EEF43017.1| peptide chain release factor, putative [Ricinus communis]
          Length = 185

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 38/47 (80%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           C +DTY+ASG GGQH N  +SAVRI H+PTG++ Q  ++RSQHKN+A
Sbjct: 4   CEMDTYKASGPGGQHRNKRESAVRIKHLPTGIISQAVEDRSQHKNRA 50


>gi|74310877|ref|YP_309296.1| peptide chain release factor-like protein [Shigella sonnei Ss046]
 gi|82542839|ref|YP_406786.1| peptide chain release factor-like protein [Shigella boydii Sb227]
 gi|188494291|ref|ZP_03001561.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|73854354|gb|AAZ87061.1| probable peptide chain release factor [Shigella sonnei Ss046]
 gi|81244250|gb|ABB64958.1| probable peptide chain release factor [Shigella boydii Sb227]
 gi|188489490|gb|EDU64593.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|323171088|gb|EFZ56737.1| putative peptide chain release factor H [Escherichia coli LT-68]
 gi|332098554|gb|EGJ03520.1| putative peptide chain release factor H [Shigella boydii 3594-74]
          Length = 166

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 13  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 125 -WKLEQQQQENSA 136


>gi|157159718|ref|YP_001457036.1| peptide chain release factor-like protein [Escherichia coli HS]
 gi|191165713|ref|ZP_03027552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300921975|ref|ZP_07138121.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|301325442|ref|ZP_07218928.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|157065398|gb|ABV04653.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|190904220|gb|EDV63930.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300421645|gb|EFK04956.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|300847740|gb|EFK75500.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|320201148|gb|EFW75731.1| peptide chain release factor-like protein [Escherichia coli
           EC4100B]
 gi|323169568|gb|EFZ55240.1| putative peptide chain release factor H [Shigella sonnei 53G]
 gi|324019875|gb|EGB89094.1| putative peptide chain release factor H [Escherichia coli MS 117-3]
          Length = 204

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIA 296
            ++LE Q++E  A
Sbjct: 162 AWKLEQQQQENSA 174


>gi|300947294|ref|ZP_07161497.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|300955685|ref|ZP_07168035.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|301643547|ref|ZP_07243589.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
 gi|260450569|gb|ACX40991.1| peptide chain release factor H [Escherichia coli DH1]
 gi|300317436|gb|EFJ67220.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|300453095|gb|EFK16715.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|301078047|gb|EFK92853.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
          Length = 178

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +         E  
Sbjct: 25  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEQE 78

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 79  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 135

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 136 AWKLEQQQQENSAAL 150


>gi|37523609|ref|NP_926986.1| hypothetical protein glr4040 [Gloeobacter violaceus PCC 7421]
 gi|35214614|dbj|BAC91981.1| glr4040 [Gloeobacter violaceus PCC 7421]
          Length = 125

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 5/80 (6%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +  YP     ++ E  E DC ++   ASG GGQH N T+S VR+TH P+GVVV   + RS
Sbjct: 11  LPAYP-----LDREALERDCTLEFVIASGPGGQHRNKTESGVRLTHRPSGVVVSATERRS 65

Query: 269 QHKNKAQAWNMLRAKLYELE 288
           QH+N+  A+  + AKL +L+
Sbjct: 66  QHQNREVAFERMAAKLADLQ 85


>gi|313111591|ref|ZP_07797390.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
 gi|310883892|gb|EFQ42486.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
          Length = 204

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY +   R   F           S+E EI     R +T R+SG GGQHVNTTDSAVR T
Sbjct: 80  SPYRARHARKNWFIGAERLAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134

Query: 254 HIPTGVVVQCQQERSQHKNK 273
           H+ +G+ V+ Q +RSQH NK
Sbjct: 135 HLASGISVRVQSQRSQHANK 154


>gi|205351639|ref|YP_002225440.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271420|emb|CAR36228.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326626670|gb|EGE33013.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 204

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    + LE Q++   A 
Sbjct: 119 PGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNGCAA 175

Query: 298 I 298
           +
Sbjct: 176 L 176


>gi|168701291|ref|ZP_02733568.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 185

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C +DTYRASG GGQ  N T SAVR+ H PTG++V  ++ RSQH+NKA+A   L   L+ L
Sbjct: 28  CEVDTYRASGPGGQKRNKTSSAVRLRHAPTGLIVIAEESRSQHENKAKALKRLWHALF-L 86

Query: 288 ELQ 290
           EL+
Sbjct: 87  ELR 89


>gi|229815133|ref|ZP_04445470.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
 gi|229809363|gb|EEP45128.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
          Length = 126

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           S+ I+    DC I  +RASG GGQ VNTTDSAVR+ H+P+G+VV  ++ RSQ +N+A   
Sbjct: 16  SMPIDELVRDCDIQAFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCL 75

Query: 278 NMLRAKLYELELQKREEIAN-IGESSKT 304
             L+ +L       ++ +A   G+++K 
Sbjct: 76  RKLKEELTRRARPFKKRVATKPGKAAKA 103


>gi|24111726|ref|NP_706236.1| peptide chain release factor 2 [Shigella flexneri 2a str. 301]
 gi|30061853|ref|NP_836024.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|24050507|gb|AAN41943.1| probable peptide chain release factor [Shigella flexneri 2a str.
           301]
 gi|30040097|gb|AAP15830.1| probable peptide chain release factor [Shigella flexneri 2a str.
           2457T]
          Length = 151

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 8/131 (6%)

Query: 145 AEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           A ++      LE   G  +  ++SA + + G NA+   +   G  + +  SPY  +  R 
Sbjct: 12  AARQDVAVTVLETETGRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRK 71

Query: 204 TSFSSIWVYPVVDDSIEIEISESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
             F  I  +         E  +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+
Sbjct: 72  NWFLGIGRFTA------DEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVK 125

Query: 263 CQQERSQHKNK 273
            Q ERSQH NK
Sbjct: 126 VQSERSQHANK 136


>gi|323976247|gb|EGB71340.1| RF-1 domain-containing protein [Escherichia coli TW10509]
          Length = 204

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 8/134 (5%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +     S E E S
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF----TSDEQEQS 106

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ++    +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++    
Sbjct: 107 DA-IHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---A 162

Query: 285 YELELQKREEIANI 298
           ++LE Q++E  A +
Sbjct: 163 WKLEQQRQENSAAL 176


>gi|210634150|ref|ZP_03298012.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
 gi|210158897|gb|EEA89868.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
          Length = 126

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 46/67 (68%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           S+  E    +C +  +RASG GGQ VNTTDSAVR+ H+P+G+VV  ++ RSQ +N+A   
Sbjct: 16  SLTAEELARECEVQVFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCL 75

Query: 278 NMLRAKL 284
             L+A+L
Sbjct: 76  RKLKAEL 82


>gi|281599646|gb|ADA72630.1| putative peptide chain release factor H [Shigella flexneri 2002017]
 gi|313646632|gb|EFS11091.1| putative peptide chain release factor H [Shigella flexneri 2a str.
           2457T]
 gi|332761634|gb|EGJ91914.1| putative peptide chain release factor H [Shigella flexneri 4343-70]
 gi|332761778|gb|EGJ92057.1| putative peptide chain release factor H [Shigella flexneri 2747-71]
 gi|332764451|gb|EGJ94684.1| putative peptide chain release factor H [Shigella flexneri K-671]
 gi|332768583|gb|EGJ98765.1| putative peptide chain release factor H [Shigella flexneri 2930-71]
 gi|333008731|gb|EGK28195.1| putative peptide chain release factor H [Shigella flexneri K-218]
 gi|333009717|gb|EGK29167.1| putative peptide chain release factor H [Shigella flexneri VA-6]
 gi|333010787|gb|EGK30213.1| putative peptide chain release factor H [Shigella flexneri K-272]
 gi|333021285|gb|EGK40538.1| putative peptide chain release factor H [Shigella flexneri K-227]
 gi|333022100|gb|EGK41343.1| putative peptide chain release factor H [Shigella flexneri K-304]
          Length = 131

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 7/110 (6%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +         E  
Sbjct: 13  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEQE 66

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK
Sbjct: 67  QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANK 116


>gi|302823050|ref|XP_002993180.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
 gi|300139071|gb|EFJ05820.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
          Length = 221

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 4/89 (4%)

Query: 265 QERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQM 322
           +ERSQ +NK +A  +L++KL   LE QK  EI  I G+  K E  WG++IR+YV  PY++
Sbjct: 18  KERSQLENKIKAIALLKSKLLVILEEQKAAEIKEIRGDVVKAE--WGQEIRNYVFHPYRL 75

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V DLRTN+E +  S ++DG+++  + A L
Sbjct: 76  VHDLRTNVETSDISGIMDGNVEPLLTAYL 104


>gi|326525162|dbj|BAK07851.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 149

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 11/137 (8%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D+ +EI    S C  +  R +GA           VR+ HIP+GV  +   ERS   NK +
Sbjct: 20  DNDLEISPLPSKCE-NGDRRNGA----------TVRVQHIPSGVTAESSGERSYFANKLK 68

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A + L+AKL  +  + R     + E    E G  R+ R Y L P ++V DL T I+ +  
Sbjct: 69  AVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHDLNTGIQLSDL 128

Query: 336 SDVLDGDLDDFMKATLA 352
           + VL+GD++ F++  + 
Sbjct: 129 NSVLEGDIEPFIRGRIV 145


>gi|301019126|ref|ZP_07183330.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
 gi|300399385|gb|EFJ82923.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
          Length = 204

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK
Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANK 154


>gi|289807125|ref|ZP_06537754.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 145

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 138 LRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L   T+ A + K     LE   G     ++SA + + G  A  + +   G    +  SPY
Sbjct: 10  LDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSPY 69

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
             +  R       W   +   S +  I   + R +T R+SG GGQHVN TDSAVR TH+ 
Sbjct: 70  RPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLA 124

Query: 257 TGVVVQCQQERSQHKNK 273
           +G+ V+ Q ERSQH NK
Sbjct: 125 SGISVKVQSERSQHANK 141


>gi|315652605|ref|ZP_07905584.1| chain release factor B [Eubacterium saburreum DSM 3986]
 gi|315485145|gb|EFU75548.1| chain release factor B [Eubacterium saburreum DSM 3986]
          Length = 199

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 15/209 (7%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L++ AG G  E Q     + +       K     E L   DGEE     + +L    +  
Sbjct: 3   LQISAGMGPVECQRAVFGICKALM----KEIPSLEILSYVDGEEKETFYSVMLSSDED-- 56

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV---VDDSIEIEISESDCRIDTYRA 235
             L   +G    +  S Y    +R   F  + + P    VDD+     SE+D  ++ + A
Sbjct: 57  --LSYIEGTMLWICKSRYRPEHKRKNWFVDVSIIPETVNVDDNF----SEADIIVEKFHA 110

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ+VN  ++ VR+ HIPTG+ +   +ERSQ  NK  A   L   L      + E+ 
Sbjct: 111 SGPGGQNVNKVETGVRVIHIPTGIRISSTRERSQLMNKKDALRKLAIVLKNKNTSQIEQS 170

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            N   S  TEI  G  IR Y  + +++ K
Sbjct: 171 KNNAWSKHTEIVRGNPIRVYEGEKFRLKK 199


>gi|70729456|ref|YP_259194.1| peptide chain release factor-like protein [Pseudomonas fluorescens
           Pf-5]
 gi|68343755|gb|AAY91361.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf-5]
          Length = 206

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 55/94 (58%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E    + R +  RASG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK  A  +++
Sbjct: 104 EAEGGEIRFEAMRASGPGGQHVNKTDSAVRATHVATGISVKVQSERSQHDNKRLARLLIQ 163

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
            +L + + Q  +E+      +   +  G  +R++
Sbjct: 164 QRLADRQEQSVQELRLQRRDAHHRVERGNAVRTF 197


>gi|317491073|ref|ZP_07949509.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920620|gb|EFV41943.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 205

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+   + R   F  +  Y   D  IE EI     + ++ ++SG GGQHVN T+SA+R T
Sbjct: 80  SPWRGGNGRKNWFIGVARYCFEDVVIEGEI-----KFESLKSSGPGGQHVNKTESAIRAT 134

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+ +G+VV+ Q ERSQH NK  A  ++  KL + +   + EI         +I  G  +R
Sbjct: 135 HLASGIVVKVQTERSQHANKRLAKLLIAHKLEQQQQNMQSEIKAQRRMFHHQITRGNPVR 194

Query: 314 SYVLQPYQMVK 324
            +    +  VK
Sbjct: 195 MFKGPDFTPVK 205


>gi|331671827|ref|ZP_08372623.1| putative peptide chain release factor H [Escherichia coli TA280]
 gi|331070816|gb|EGI42175.1| putative peptide chain release factor H [Escherichia coli TA280]
          Length = 232

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G +A+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 79  LRSALISLDGDSAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 132

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 133 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 189

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 190 AWKLEQQQQENSAAL 204


>gi|227538749|ref|ZP_03968798.1| peptide chain release factor family protein [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241258|gb|EEI91273.1| peptide chain release factor family protein [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 170

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 4/170 (2%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG 174
           D  + V AG G  E       +++   + A     +   L+  +G   G + SA+L I G
Sbjct: 2   DKIIGVTAGRGPEECSWVVAQVIKKIIQEAATFDVEVRVLDRQEGSINGTVISASLQISG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            N   +     G  + +  S +  + +R   F  I V+ +   +  I   E D      R
Sbjct: 62  ENCMAFAALWTGTIQWIGKSDFRKSHKRKNWF--IEVFEIKQSASWI-FDEKDVGYQAMR 118

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +SGAGGQHVN   SAVR THIPTGV V     RSQH+NK  A   L+ KL
Sbjct: 119 SSGAGGQHVNKVSSAVRATHIPTGVSVVSMDSRSQHQNKKIATKRLQKKL 168


>gi|261885046|ref|ZP_06009085.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 83

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+++LYE EL K++E  N  E  K+EIGWG QIRSYVL PYQ VKD R+    +    +L
Sbjct: 4   LKSRLYEFELMKQQEANNAIE--KSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTDAIL 61

Query: 340 DGDLDDFMKATLAIKK 355
           DGD+   +++ L  +K
Sbjct: 62  DGDIKKIIESVLISQK 77


>gi|212710167|ref|ZP_03318295.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM
           30120]
 gi|212687166|gb|EEB46694.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM
           30120]
          Length = 203

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 14/155 (9%)

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           + + A   K  TE LE    ++ G+KS  + + G +A    +   G  +    SP     
Sbjct: 26  FVKEAALLKVNTELLESCPSKQ-GLKSVLIALDGIHAEKMAERWSGTIQWQCQSPLRPRH 84

Query: 201 RRHTSFSSIWVY----PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +R   F S+ ++    P+ +  IE E ++S          GAGGQHVN T SAVR  H+ 
Sbjct: 85  KRKNWFISVMMFTPIQPLENSEIEYEFTQSQ---------GAGGQHVNKTCSAVRAKHVA 135

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TG+ V+ Q ERSQH NK  A  ++  KL E + Q+
Sbjct: 136 TGISVKVQSERSQHANKKLAKELIHWKLCEYQSQQ 170


>gi|331645440|ref|ZP_08346544.1| putative peptide chain release factor H [Escherichia coli M605]
 gi|331045602|gb|EGI17728.1| putative peptide chain release factor H [Escherichia coli M605]
          Length = 232

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 79  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 132

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD    +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  +L A 
Sbjct: 133 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 190

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 191 -WKLEQQQQENSAAL 204


>gi|330910076|gb|EGH38586.1| hypothetical protein ECAA86_00359 [Escherichia coli AA86]
          Length = 204

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD    +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|139437086|ref|ZP_01771246.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
 gi|133776733|gb|EBA40553.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
          Length = 132

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 45/66 (68%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + +E    DC +  +RA+G GGQ VNTTDSAVR+ H PTG+VV  ++ RSQ +N++    
Sbjct: 23  MSVEELARDCEVQVFRATGPGGQGVNTTDSAVRMKHGPTGIVVTARESRSQFQNRSCCLR 82

Query: 279 MLRAKL 284
            LRA+L
Sbjct: 83  KLRAEL 88


>gi|324114895|gb|EGC08861.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
          Length = 204

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD    +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQRQENSAAL 176


>gi|312891971|ref|ZP_07751474.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
 gi|311295602|gb|EFQ72768.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
          Length = 205

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 4/167 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177
           +++ +G G  E       + R+  + A++     + LE  + + +G   SAT++ +G   
Sbjct: 6   IQITSGKGPAECCRVVACVQRLMLKQAKQFGVDIQVLENREADLSGTFLSATMMAQGMQL 65

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +  +G  R +  SPY    +R   F  +  +   D    ++ +  D +++T R+SG
Sbjct: 66  EVFRREWEGTIRWIAQSPYRRYHQRKNWFVGVAFF---DIKQLMQWNPKDVKLETTRSSG 122

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            GGQHVN  ++AVR TH+P+G+ V     RSQ +NK      L AK+
Sbjct: 123 PGGQHVNKVETAVRGTHLPSGIQVMAMDSRSQLENKKLCLARLEAKI 169


>gi|293331715|ref|NP_001169537.1| hypothetical protein LOC100383413 [Zea mays]
 gi|224029957|gb|ACN34054.1| unknown [Zea mays]
          Length = 229

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 40/54 (74%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           C + T++ASG GGQH N  +SAVR+ H+P G++ Q  ++RSQHKN+A A + LR
Sbjct: 10  CDMGTFKASGPGGQHCNKRESAVRLKHLPIGIIAQAVEDRSQHKNRASALSRLR 63


>gi|261345238|ref|ZP_05972882.1| putative peptide chain release factor H [Providencia rustigianii
           DSM 4541]
 gi|282566935|gb|EFB72470.1| putative peptide chain release factor H [Providencia rustigianii
           DSM 4541]
          Length = 203

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 5/160 (3%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G+KS  + ++G  +   +    G  +    SP     +R   F S+  +  +       +
Sbjct: 48  GLKSVLVSLEGKQSEQLVNVWSGTVQWQCQSPLRPRHKRKNWFISVIAFSPIQP-----L 102

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            ES+   +  ++ GAGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  ++  K
Sbjct: 103 EESEIEYEFTKSQGAGGQHVNKTCSAVRAKHVSTGISVKVQSERSQHANKRLAKELIHWK 162

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           L E + Q+R ++      S  +I  G    ++V   ++ V
Sbjct: 163 LSEFQSQQRTDLDKQRHHSHYQIERGNASITFVGNEFKRV 202


>gi|323965216|gb|EGB60674.1| RF-1 domain-containing protein [Escherichia coli M863]
 gi|327254578|gb|EGE66194.1| putative peptide chain release factor H [Escherichia coli STEC_7v]
          Length = 204

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD    +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGIRVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQRQENSAAL 176


>gi|301631891|ref|XP_002945028.1| PREDICTED: hypothetical protein LOC100485311 [Xenopus (Silurana)
           tropicalis]
          Length = 782

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 7/154 (4%)

Query: 163 AGIKSATLLIKGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           AG KS  +L++G     A  WL   QG  + V  SP+    RR   F  + V        
Sbjct: 626 AGFKS--VLLQGAASAAALQWLATWQGSVQCVFTSPWRPGHRRKNWF--VGVQRCAAPET 681

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
              + +        RASG GGQHVNTTDSAV   H+ +G+ V+   ERSQH NK  A  +
Sbjct: 682 VAGLDDGAIVYQACRASGKGGQHVNTTDSAVHALHLASGIAVKVMGERSQHANKRLARAL 741

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           +  +L E +  + E+         T +  GR +R
Sbjct: 742 IALRLAERQTAQAEDAGRQRRLQHTAVQRGRPVR 775


>gi|146340|gb|AAA23958.1| peptide-chain-release factor 2 [Escherichia coli]
          Length = 72

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KLYELE+QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG 
Sbjct: 1   KLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGS 59

Query: 343 LDDFMKATL 351
           LD F++A+L
Sbjct: 60  LDQFIEASL 68


>gi|325498389|gb|EGC96248.1| prfH [Escherichia fergusonii ECD227]
          Length = 204

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G NA+   +   G  + +  SPY  +  R   F  I  +   D     E  
Sbjct: 51  LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104

Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +SD    +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++   
Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161

Query: 284 LYELELQKREEIANI 298
            ++LE Q++E  A +
Sbjct: 162 AWKLEQQQQENSAAL 176


>gi|104779685|ref|YP_606183.1| peptide chain release factor-like protein [Pseudomonas entomophila
           L48]
 gi|95108672|emb|CAK13366.1| putative peptide chain release factor [Pseudomonas entomophila L48]
          Length = 206

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 7/94 (7%)

Query: 194 SPY-DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SPY   ++R++  F      P   +        S+   +T R+SG GGQHVNTTDSAVR 
Sbjct: 80  SPYRPGHARKNWFFGGARFAPPAPELA------SEIHFETLRSSGPGGQHVNTTDSAVRA 133

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           TH+ +GV V+ Q ERSQH NK  A  ++  +L +
Sbjct: 134 THLASGVSVKVQSERSQHANKRLALLLIGQRLAQ 167


>gi|125528646|gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group]
          Length = 246

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C + T++ASG GGQH N  +SAVR+ H PTG++ Q  ++RSQH N+A A + LR  L  L
Sbjct: 86  CEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALSRLRT-LIAL 144

Query: 288 ELQK 291
           +++K
Sbjct: 145 KVRK 148


>gi|256426219|ref|YP_003126872.1| peptide chain release factor-like protein [Chitinophaga pinensis
           DSM 2588]
 gi|256041127|gb|ACU64671.1| peptide chain release factor H [Chitinophaga pinensis DSM 2588]
          Length = 210

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 10/184 (5%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIK 173
           N + ++V AG G  E       ++ M  + A  +      LE   G   G + SA LLI+
Sbjct: 2   NKSIIQVTAGRGPEECSRVVARVVEMMMKDARGKALDITLLESTKGHLKGTLLSAVLLIQ 61

Query: 174 ------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
                       +++  +G  + V  SP+    +R   F  + V+   D + + E +  D
Sbjct: 62  TGGISSNKTLEAFIQEWRGTIQWVAQSPFRKYHKRKNWFVGVEVF---DVNKQQEWNLKD 118

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            ++++ RASG GGQHVN  ++AVR TH+P+G+ V     RSQ +NK      L AK    
Sbjct: 119 VKLESCRASGPGGQHVNKVETAVRGTHLPSGMQVLAMDSRSQLENKQLCLKRLEAKFMAW 178

Query: 288 ELQK 291
           ++++
Sbjct: 179 QMEQ 182


>gi|319935093|ref|ZP_08009534.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1]
 gi|319809988|gb|EFW06365.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1]
          Length = 195

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 13/206 (6%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++++G G  E +    ML +       K     E +  +  ++  +KS T  I    +Y
Sbjct: 3   IQINSGQGPKECEYACYMLYQELL----KEYSSLEVVSRYVSDQKCLKSITFSIHEDLSY 58

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
                 +G  + +  SP+  + +R   F  I    ++ + ++IE  E D + +T+R+SG 
Sbjct: 59  -----LEGTVQWICQSPFRPHHKRRNWFVDI---SIIKEELKIENVE-DIKFETFRSSGK 109

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN   +A+R  HIPTG+ V    +RSQ +NK  A+  L  K+ ++     + I  +
Sbjct: 110 GGQNVNKVSTAIRAIHIPTGISVVAMDQRSQLQNKKIAYLRLMEKINQVNSSHHKRIDYL 169

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVK 324
             +   +I  G  IR Y    ++ +K
Sbjct: 170 NWNKHNQIVRGNPIRVYSGMKFKRIK 195


>gi|293413513|ref|ZP_06656162.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
 gi|291433571|gb|EFF06544.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
          Length = 122

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           S + V+   D ++ +  +E+    DT R+SG GGQHVN TDSAVR TH+ +G+ V+ Q E
Sbjct: 6   SLLVVFTRQDVAVTVLETEAGRYPDTLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSE 65

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           RSQH NK  A  ++    ++LE Q++E  A +
Sbjct: 66  RSQHANKRLARLLI---AWKLEQQQQENSAAL 94


>gi|255945923|ref|XP_002563729.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588464|emb|CAP86573.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 186

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 50/83 (60%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS   + P       ++IS++D  I   + +G GGQ +N T+SAV+I H P+GVVV+CQ 
Sbjct: 21  FSQTPIVPAKPLPPRLKISDADISISYLKGTGPGGQKINKTNSAVQIIHKPSGVVVKCQA 80

Query: 266 ERSQHKNKAQAWNMLRAKLYELE 288
            RSQ +N   A ++L  K+  LE
Sbjct: 81  TRSQSQNAKIARSLLADKIEALE 103


>gi|90019981|ref|YP_525808.1| putative peptide chain release factor [Saccharophagus degradans
           2-40]
 gi|89949581|gb|ABD79596.1| Class I peptide chain release factor [Saccharophagus degradans
           2-40]
          Length = 248

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 13/169 (7%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI----------HDGEEAGIKS 167
           +L++ AG G  E       LL++    A+ R    E +E           H        S
Sbjct: 29  WLQLTAGQGPKECGWVVAQLLKVMLVQAQARGIDVEVVESLAFDKMLRNQHIVMPDAYLS 88

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI-WVYPV--VDDSIEIEIS 224
             L I+G  A  +     G H+    S Y    +R   F  +  + PV  V+ SI  +  
Sbjct: 89  VLLRIEGEQAQLFANEWCGTHKWQGESIYRPKHKRINWFVGVERITPVKPVETSINYQQL 148

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +     ++ ++SGAGGQHVNTT+SAVR TH P+G+ V+   +RSQH+NK
Sbjct: 149 QRQLVFESMKSSGAGGQHVNTTNSAVRATHTPSGITVRVDTDRSQHRNK 197


>gi|315283645|ref|ZP_07871778.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
 gi|313612712|gb|EFR86721.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
          Length = 70

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +K  E+A I    + EIGWG QIRSYV  PY MVKD RT+ E  +   V+DGDLDDF+ A
Sbjct: 5   EKERELAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTSYETGNIQAVMDGDLDDFINA 63

Query: 350 TL 351
            L
Sbjct: 64  YL 65


>gi|110224569|emb|CAJ98782.1| peptide release factor protein 2 [Francisella novicida]
 gi|259236249|gb|ACW20342.1| PrfB [Francisella sp. FnSp1]
          Length = 101

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     L++LA  E+D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLQTLTELIDLA--EEDESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|162455289|ref|YP_001617656.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
 gi|161165871|emb|CAN97176.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
          Length = 222

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           + +++++ AG G  E + +   L        ++R      + +H G+E    S  +L++G
Sbjct: 2   SRSWVQISAGRGPIEVRRFVARLAERMEALCQERGLAVVDVTLH-GDEDAPASVEILVEG 60

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD------------DSIEIE 222
            +A   L+GE G H LV  S     + R   F+ + ++                D  E+E
Sbjct: 61  -DARRCLEGELGTHALVERSAARGKAARKRWFAGVAIHAAGADAGAGAGEGVGVDLRELE 119

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           IS         RASG GGQHVN T SAVRI H P+G+ V+   ERSQ  N  +    +  
Sbjct: 120 IS-------ACRASGPGGQHVNKTLSAVRIHHRPSGITVRVADERSQRANVRRGVERIAE 172

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           +L E   ++  E      S    I  G  +R+Y
Sbjct: 173 RLAERAARRVAEGEAARWSEHDRIVRGEPVRTY 205


>gi|326517198|dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 170

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 41/56 (73%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           + C + T+++SG GGQH N  +SAVR+ H PTG+V Q  ++RSQHKN++ A + LR
Sbjct: 8   AQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVEDRSQHKNRSSALSRLR 63


>gi|313622391|gb|EFR92858.1| peptide chain release factor 2 [Listeria innocua FSL J1-023]
          Length = 55

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 35/49 (71%)

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L
Sbjct: 2   QKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 50


>gi|183600289|ref|ZP_02961782.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
 gi|188020079|gb|EDU58119.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
          Length = 202

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 6/147 (4%)

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+KR+     LE     + G+KSA + ++G  A    +   G  +    SP     +R  
Sbjct: 29  AKKREVMVNTLET-VASKHGLKSALVALEGHGAEELAQLWSGTIQWQCQSPLRPKHKRKN 87

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
                W   V+  S    I ESD   +  +A G GGQHVN T SAVR  H+ TG+ V+ Q
Sbjct: 88  -----WFINVIRFSPIQTIEESDIEFEFIKAQGPGGQHVNKTCSAVRAKHLATGISVKVQ 142

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQK 291
            ERSQH NK  A  ++  +L E + Q+
Sbjct: 143 SERSQHANKKLAKQLIYWRLNEYQDQQ 169


>gi|160897900|ref|YP_001563482.1| peptide chain release factor H [Delftia acidovorans SPH-1]
 gi|160363484|gb|ABX35097.1| peptide chain release factor H [Delftia acidovorans SPH-1]
          Length = 199

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 77/175 (44%), Gaps = 9/175 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA- 177
           +++ A  G  E +    + LR   R         + LE      AG KS  L  +G    
Sbjct: 4   IQLTASHGPAECEHAVRLTLRELLRDCAASGIAVDVLE-ETPTPAGYKSVLLRCEGDTGL 62

Query: 178 -YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSIEIEISESDCRIDTYRA 235
            +G L    G  + V  SP   +  R   F ++    P      + EI    C+     A
Sbjct: 63  LHGTLGAWLGTIQWVFDSPLRPHHPRRNWFVAVQKCEPPRQLPADGEIVFQACK-----A 117

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           SG GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL  L  Q
Sbjct: 118 SGKGGQHVNTTDSAVHALHVPSGISVKVMSERSQHANKRLARELLALKLARLNAQ 172


>gi|269119386|ref|YP_003307563.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
 gi|268613264|gb|ACZ07632.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
          Length = 206

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           IS+    I T R+SG GGQ+VN  ++AVRI HIPTG+ +  ++ER+Q+ NK  A   L  
Sbjct: 105 ISKKTTEITTMRSSGNGGQNVNKLETAVRIKHIPTGISIVSREERTQYANKKAAVKKLEE 164

Query: 283 KLYELEL--QKREEI 295
           KL  +E+  QK EE+
Sbjct: 165 KLTNMEIYHQKEEEM 179


>gi|266622646|ref|ZP_06115581.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
 gi|288865627|gb|EFC97925.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
          Length = 206

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY    +R   +  + +   V    E    E   R +T+++ G GGQ+VN  ++ VR  
Sbjct: 70  SPYRPEHKRKNWYVDVSILETVPRVTE----EKLVRFETFKSGGKGGQNVNKVETGVRAI 125

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG  V   + RSQH NK  A N L   L E+ L+      N+     T +  G  +R
Sbjct: 126 HIPTGTAVVSTEARSQHMNKQAALNRLCEILAEMNLESGRREKNLAWMEHTRLERGNPVR 185

Query: 314 SYVLQPYQM 322
            Y  + + +
Sbjct: 186 VYEGRAFHL 194


>gi|226294428|gb|EEH49848.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18]
          Length = 315

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 7/102 (6%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171
           LE+  GAGG E+  +AN LLRMYT +   R  +   L+          G E  +  A + 
Sbjct: 211 LELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVME 270

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
           I+ P +Y  L+ E GVHR+ R+   +S  R HTS  S+ + P
Sbjct: 271 IETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAGSVAILP 312


>gi|264679478|ref|YP_003279385.1| class I peptide chain release factor [Comamonas testosteroni CNB-2]
 gi|262209991|gb|ACY34089.1| Class I peptide chain release factor [Comamonas testosteroni CNB-2]
          Length = 195

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 163 AGIKSATLLIK--GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSI 219
           AG +S  L  +   P    WL    G  + +  SP+     R   F ++    P    ++
Sbjct: 47  AGYRSVLLRCERETPALREWL----GTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM 102

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           + EI    C+     ASG GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +
Sbjct: 103 DGEIQFQSCK-----ASGKGGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLAREL 157

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           L  KL +   +   +   +      E+  G+ I+ + L
Sbjct: 158 LAIKLAQHNARSEGQAQRLRSQQHWEVERGQAIKVFRL 195


>gi|262196479|ref|YP_003267688.1| class I peptide chain release factor [Haliangium ochraceum DSM
           14365]
 gi|262079826|gb|ACY15795.1| Class I peptide chain release factor [Haliangium ochraceum DSM
           14365]
          Length = 196

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 2/132 (1%)

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            +  A+  H  +E+  +S    + G  +   L G  G H LV  S       R   F+ +
Sbjct: 21  LRIGAVSTHGNDES-PRSVAFTVSGAVSAA-LAGFVGTHVLVARSSRRGRRARKRWFAGV 78

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            ++     +   EI   +  +   RA G GGQHVNTTDSAVR+ H  +G+ V+   ERSQ
Sbjct: 79  SIHAQQAATAVAEIRPDEVEVTASRAGGPGGQHVNTTDSAVRVRHKASGISVRVAGERSQ 138

Query: 270 HKNKAQAWNMLR 281
           H+N++ A   LR
Sbjct: 139 HRNRSVALTRLR 150


>gi|207111525|ref|ZP_03245687.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 45

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/35 (80%), Positives = 31/35 (88%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           G GGQHVN T+SAVRITH PTG+VVQCQ +RSQHK
Sbjct: 11  GRGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHK 45


>gi|297734721|emb|CBI16955.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 37/47 (78%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           C + T+++SG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+A
Sbjct: 64  CEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 110


>gi|221065979|ref|ZP_03542084.1| peptide chain release factor H [Comamonas testosteroni KF-1]
 gi|220711002|gb|EED66370.1| peptide chain release factor H [Comamonas testosteroni KF-1]
          Length = 195

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 163 AGIKSATLLIK--GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSI 219
           AG +S  L  +   P    WL    G  + +  SP+     R   F ++    P    ++
Sbjct: 47  AGYRSVLLRCERETPALREWL----GTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLTM 102

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           + EI    C+     ASG GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +
Sbjct: 103 DGEIQFQSCK-----ASGKGGQHVNTTDSAVHALHVPSGMAVKVMSERSQHANKQLAREL 157

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           L  KL     + + +   +      E+  G+ ++ + L
Sbjct: 158 LAIKLARHNARSQGQAQRLRSQQHREVERGQAVKVFRL 195


>gi|299530560|ref|ZP_07043980.1| Class I peptide chain release factor [Comamonas testosteroni S44]
 gi|298721536|gb|EFI62473.1| Class I peptide chain release factor [Comamonas testosteroni S44]
          Length = 195

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 163 AGIKSATLLIK--GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSI 219
           AG +S  L  +   P    WL    G  + +  SP+     R   F ++    P    ++
Sbjct: 47  AGCRSVLLRCERETPALREWL----GTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM 102

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           + EI    C+     ASG GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +
Sbjct: 103 DGEIQFQSCK-----ASGKGGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLAREL 157

Query: 280 LRAKLYE 286
           L  KL +
Sbjct: 158 LAIKLAQ 164


>gi|226294427|gb|EEH49847.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18]
          Length = 153

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 14/83 (16%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ---------KR 292
           HVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW +LRA++ +   +         +R
Sbjct: 9   HVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRR 68

Query: 293 EEIANIGESSKTEIGWGRQIRSY 315
             +  +G     ++G G +IR+Y
Sbjct: 69  GAMGGVG-----KMGRGDKIRTY 86


>gi|326789649|ref|YP_004307470.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
 gi|326540413|gb|ADZ82272.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
          Length = 195

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 12/91 (13%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEI----SESDCRIDTYRASGAGGQHVNTTDSA 249
           SPY +N +R   +        +D SI  E+    +E   R +T+R+ G GGQHVN  ++ 
Sbjct: 70  SPYRANCKRKNWY--------IDVSILEEVKKVSTEEIIRFETFRSGGKGGQHVNKVETG 121

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           VR  H+PTG+ V   + RSQH NK  A N L
Sbjct: 122 VRAIHMPTGIAVVSTEARSQHMNKQIAMNRL 152


>gi|226320894|ref|ZP_03796445.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233666|gb|EEH32396.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 86

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/82 (41%), Positives = 50/82 (60%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E DS +  +E+ AG GG E+  +AN L  MY +++EK+K+KTE +  ++ E  G K    
Sbjct: 5   ENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIF 64

Query: 171 LIKGPNAYGWLKGEQGVHRLVR 192
            IKG + +  LK E GVHR+ R
Sbjct: 65  EIKGKDVFKKLKYESGVHRVQR 86


>gi|259235601|gb|ACW20312.1| peptide release factor protein 2 [Francisella cf. novicida 3523]
          Length = 111

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 72/111 (64%), Gaps = 2/111 (1%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           ED  +W N   A+ L +++  L+N +   + I + L     LLELA E++  +++QE + 
Sbjct: 2   EDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEEDE--TLMQEIAK 59

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
           + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY
Sbjct: 60  DTQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMY 110


>gi|160935130|ref|ZP_02082513.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441861|gb|EDP19558.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
          Length = 198

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY    RR   +  + +     D +     E   R +T+R+ G GGQHVN  ++ VR  
Sbjct: 70  SPYRPGHRRKNWYVDVSIL----DQVPRISEERMVRFETFRSGGKGGQHVNKVETGVRAI 125

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG  V   Q RSQH NK  A + L + L E+  + +++  ++       +  G  +R
Sbjct: 126 HIPTGTAVVSTQARSQHMNKQIAMDRLCSILAEMNARNQQKEKSLAWMEHARLERGNPVR 185

Query: 314 SY 315
            Y
Sbjct: 186 IY 187


>gi|281356039|ref|ZP_06242532.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
 gi|281317408|gb|EFB01429.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
          Length = 204

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 5/168 (2%)

Query: 118 YLEVHAGAGGTESQDW-ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           +LE+ +G G  E +   A +++R+ +    + +F+  AL   + E++ +KS    ++G  
Sbjct: 5   FLEISSGQGPEECELLVAKLMVRLTSELRREVRFREVALN-GNREKSLVKSVLFELEGEG 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A   +    G  + +  SP+  + +R   ++ I ++   +   E+    +D      R+S
Sbjct: 64  AAVSVAPWLGTIQWIAASPFRPHHKRRNWYAGIRLF---EAEPELAFDPNDVEFSASRSS 120

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQHVNT+++ ++  H PTG      +ERSQ +N+  A   L AK+
Sbjct: 121 GPGGQHVNTSNTRIQAFHRPTGQCAVAGEERSQLRNRELALARLAAKV 168


>gi|317490594|ref|ZP_07949067.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325831509|ref|ZP_08164763.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1]
 gi|316910296|gb|EFV31932.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325486763|gb|EGC89211.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1]
          Length = 124

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 42/66 (63%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + +E    DC +  +RASG GGQ VNTTDSAVR+TH+P+G+    ++ RSQ +N+     
Sbjct: 17  MSLEDIARDCDVQAFRASGPGGQCVNTTDSAVRMTHVPSGMTATSRESRSQFRNRQLCLQ 76

Query: 279 MLRAKL 284
            LR + 
Sbjct: 77  KLRDRF 82


>gi|225459890|ref|XP_002263666.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 507

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 37/47 (78%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           C + T+++SG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+A
Sbjct: 64  CEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 110


>gi|328852101|gb|EGG01250.1| hypothetical protein MELLADRAFT_92621 [Melampsora larici-populina
           98AG31]
          Length = 174

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 4/97 (4%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----VDDSI 219
           G++ A L IKG + Y  ++ E GVH +  +    + S  HTS +++ V        D   
Sbjct: 9   GLREAPLEIKGEDVYKRMRWEAGVHCVQCVPVMQNTSLVHTSTAAVIVLAFDPGNQDRQE 68

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           E    + D R +T R+ G GGQHVN T+S VR+TH+P
Sbjct: 69  EALFEDKDVRTETMRSQGVGGQHVNKTESVVRLTHVP 105


>gi|167590758|ref|ZP_02383146.1| peptide chain release factor-like protein [Burkholderia ubonensis
           Bu]
          Length = 177

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177
           L++ +  G  E Q  A   L+     A+  +     L++  GE  G ++S  L + G +A
Sbjct: 3   LQISSAHGPAECQLAAAKALQRLQAEADACRVALTVLDLQPGERPGTVRSVLLDLDGADA 62

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
                   G  + +  SPY     R       W   V   +    + +   + +  RA G
Sbjct: 63  AALADRWAGTLQWICASPYRLRHPRKN-----WFVGVTRCADAPPLPDGAVKFEAMRARG 117

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            GGQHVN T SA+R TH+ TG  V+ + ERSQH NK  A  +L A+L E
Sbjct: 118 PGGQHVNKTSSAIRATHLATGTSVRVESERSQHANKRLALQLLHARLRE 166


>gi|319937084|ref|ZP_08011493.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1]
 gi|319807862|gb|EFW04447.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1]
          Length = 197

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY  + +R   F  +    ++ + I+I+ + +D R + +R+SG GGQ+VN   +A+R  
Sbjct: 71  SPYRPHHKRKNWFIDV---SIIKEDIKID-NTNDIRYEVFRSSGKGGQNVNKVSTAIRAI 126

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+V     +RSQ +NK  A+  L  K+ E      + I  +      +I  G  IR
Sbjct: 127 HIPTGIVTVSMDQRSQLQNKKIAYLRLLEKIDETSSSINKSIHYLNWVKHNQIERGNPIR 186

Query: 314 SY 315
            Y
Sbjct: 187 VY 188


>gi|227357000|ref|ZP_03841372.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
 gi|227162878|gb|EEI47837.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
          Length = 203

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           EI +++   +T RA+G GGQHVN T SAVR THI TG+ V+ Q +RSQH NK  A  ++
Sbjct: 100 EIQDTEILFETMRANGPGGQHVNKTSSAVRATHIATGISVKIQSQRSQHANKKLAKQLI 158


>gi|330951102|gb|EGH51362.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 111

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 8/103 (7%)

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG--- 309
           H+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q+    AN I    K  +G G   
Sbjct: 1   HLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSGDRS 57

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 58  ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 99


>gi|207111206|ref|ZP_03245368.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 55

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%)

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 3   KDEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 54


>gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex
           echinatior]
          Length = 163

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKS    +K PN+  +L        L  +   +S   R+ SF     Y  V    EI++ 
Sbjct: 3   IKSVLTCLKVPNSIFFLVSRNEFLLLGIVFNSESIQVRNKSFKRYLDYSNVPKLDEIDLE 62

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E        R SG GGQ  N T++AV + H PTG+VV+C + RSQ  NK +A  +L  KL
Sbjct: 63  E-----QFIRGSGPGGQATNKTNNAVLLKHKPTGLVVKCHETRSQWDNKKRAREILVTKL 117


>gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM
           4136]
          Length = 141

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 4/81 (4%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +++ I E D      R +GAGGQ +N T S V +TH+PTG+ V+CQ+ERSQ  N+  A  
Sbjct: 20  LKLGIREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRVVARE 79

Query: 279 MLRAKLYE----LELQKREEI 295
            L +KL E    ++L++R E+
Sbjct: 80  ELCSKLEERLAAVKLERRNEV 100


>gi|203459047|ref|YP_002224203.1| gp204 [Mycobacterium phage ScottMcG]
 gi|197312494|gb|ACH62849.1| gp204 [Mycobacterium phage ScottMcG]
          Length = 118

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + ++ +DC ++T R SG GGQ+ N  D+AVRI H P+G V + Q+ERSQ +NK  A+  +
Sbjct: 7   LSVTLADCVVETKRGSGKGGQNRNKRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 66

Query: 281 RAKLYELELQKREEIAN 297
            A+  + +L  + ++AN
Sbjct: 67  -AESSKFQLWLKRQVAN 82


>gi|281416112|ref|YP_003347848.1| gp198 [Mycobacterium phage ET08]
 gi|255927791|gb|ACU41412.1| gp198 [Mycobacterium phage ET08]
 gi|255928079|gb|ACU41698.1| gp203 [Mycobacterium phage LRRHood]
          Length = 136

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + ++ +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  +
Sbjct: 25  LSVTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 84

Query: 281 RAKLYELELQKREEIAN 297
            A+  + +L  + ++AN
Sbjct: 85  -AESSKFQLWLKRQVAN 100


>gi|146343293|ref|YP_001208341.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. ORS278]
 gi|146196099|emb|CAL80126.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. ORS278]
          Length = 207

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%)

Query: 210 WVYPVVDDSIEIEI---SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           W   +VD  +  ++   S SD R +++RA G GGQH N T+SAVR  H+P+G+    +  
Sbjct: 90  WFVGIVDLPLPAQLPMLSTSDVRFESFRAGGPGGQHQNKTESAVRAVHLPSGLTAIARDG 149

Query: 267 RSQHKNK 273
           RSQH NK
Sbjct: 150 RSQHGNK 156


>gi|29566685|ref|NP_818251.1| gp200 [Mycobacterium phage Bxz1]
 gi|109393384|ref|YP_656182.1| gp202 [Mycobacterium phage Catera]
 gi|29425410|gb|AAN16834.1| gp200 [Mycobacterium phage Bxz1]
 gi|91981206|gb|ABE67921.1| gp202 [Mycobacterium phage Catera]
          Length = 113

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + ++ +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  +
Sbjct: 2   LSVTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 61

Query: 281 RAKLYELELQKREEIAN 297
            A+  + +L  + ++AN
Sbjct: 62  -AESSKFQLWLKRQVAN 77


>gi|203460691|ref|YP_002224425.1| gp204 [Mycobacterium phage Spud]
 gi|197312272|gb|ACH62628.1| gp204 [Mycobacterium phage Spud]
          Length = 113

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + ++ +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  +
Sbjct: 2   LSVTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 61

Query: 281 RAKLYELELQKREEIAN 297
            A+  + +L  + ++AN
Sbjct: 62  -AESSKFQLWLKRQVAN 77


>gi|331001770|ref|ZP_08325292.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412744|gb|EGG92127.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 200

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           S Y    +R   F  + + P   + +E   SE+D RI+ + A+G GGQ+VN  ++ VR+ 
Sbjct: 70  SKYRPWHKRKNWFIDVSIIPETTE-MEENFSENDLRIEKFHANGPGGQNVNKVETGVRVI 128

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIP+G+ V   +ERSQ  NK  A   L   L      ++ +  N   S  +EI  G  +R
Sbjct: 129 HIPSGIRVSSTRERSQLLNKKDAIRKLAIVLKSRNDFEKVKSRNNAWSKHSEIVRGNPVR 188

Query: 314 SY 315
            Y
Sbjct: 189 IY 190


>gi|296775661|gb|ADH42938.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 214

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +  +E+ AG GG E+  +   L RMY +   K+ +K E + I   E  G K     +
Sbjct: 107 DEKNTIVEIRAGTGGLEATLFVADLFRMYEKVCSKKGWKIEIISISKSEAKGFKEVIFSV 166

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            G N Y +LK E GVHR+ R+   ++  R
Sbjct: 167 IGENIYSYLKYESGVHRVQRVPTTEAQGR 195


>gi|224071118|ref|XP_002189696.1| PREDICTED: similar to CL065 protein [Taeniopygia guttata]
          Length = 228

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 41/65 (63%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EISE+D      R  G GGQ  N T++ V + HIP+G+VV+C Q RS  KN+  A  +L
Sbjct: 117 LEISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSLEKNRKIAREIL 176

Query: 281 RAKLY 285
           + K+Y
Sbjct: 177 QEKVY 181


>gi|169838607|ref|ZP_02871795.1| peptide chain release factor 2 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 61

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 42/61 (68%)

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GGT++QD+A ML RMY R+AEK   + + +E   G+EAG+K++ + I GP AYG L  
Sbjct: 1   GVGGTDAQDFAEMLERMYLRFAEKSSLEAKIVERSSGDEAGLKTSVIEINGPYAYGRLHS 60

Query: 184 E 184
           E
Sbjct: 61  E 61


>gi|225390312|ref|ZP_03760036.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
 gi|225043636|gb|EEG53882.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
          Length = 196

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 215 VDDSIEIEIS----ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +D SI  EI     E   R +T+R+ G GGQ+VN  ++ VR+ HIPTG+ V   + RSQH
Sbjct: 83  IDVSILEEIPRTSKEMQVRFETFRSGGKGGQNVNKVETGVRVVHIPTGIAVVSTEARSQH 142

Query: 271 KNKAQAWNMLRAKLYELELQ 290
            NK  A N L   L + +LQ
Sbjct: 143 MNKQIALNRLCDILADRDLQ 162


>gi|197287314|ref|YP_002153186.1| peptide chain release factor [Proteus mirabilis HI4320]
 gi|194684801|emb|CAR46873.1| probable peptide chain release factor [Proteus mirabilis HI4320]
          Length = 203

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 45/76 (59%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI +++   +T RA+G GGQHVN T SAVR THI TG+ V+ Q +R QH NK  A  ++ 
Sbjct: 100 EIQDTEILFETMRANGPGGQHVNKTSSAVRATHIATGISVKIQSQRIQHANKKLAKQLIA 159

Query: 282 AKLYELELQKREEIAN 297
             L     Q++    N
Sbjct: 160 WHLTHYLSQQQASFNN 175


>gi|149197057|ref|ZP_01874109.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
 gi|149139603|gb|EDM28004.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
          Length = 203

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 8/164 (4%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKG 174
           +A+++  +G G  E +     + +++ R AE    + E ++   G E+   +S  + ++G
Sbjct: 2   NAWIQFSSGQGPRECERVLWHIFKIFCREAEDENIQCELIKAEKGSEKNSFRSLLISLEG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF--SSIWVYPVVDDSIEIEISESDCRIDT 232
                  K  +G       SP+  + +R   F  +S +  P      + E+  S  + + 
Sbjct: 62  NQLETLRKNWEGSLLWRAPSPFRPHHKRRNWFVQASFFAIPA-----KAELDLSQIKFEA 116

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            R SG GGQHVN   +A+R  + P  + + C +ERSQ++NK  A
Sbjct: 117 QRGSGPGGQHVNKCATAIRAYYAPLQLSILCNEERSQYRNKMLA 160


>gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
 gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
          Length = 205

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 17/106 (16%)

Query: 203 HTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           HTS      +P++  S+   + + +SD   +  + SG GGQ +N T SAV++ HIPTG+V
Sbjct: 9   HTS------HPLLSKSLPPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIV 62

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           V+ Q  RS+  N+  A  +L+ ++ EL+L         GE ++T +
Sbjct: 63  VKYQDTRSREINRKMARRILQDRIEELQL---------GEDARTRV 99


>gi|204305830|ref|YP_002224647.1| gp203 [Mycobacterium phage Cali]
 gi|197312803|gb|ACH63156.1| gp203 [Mycobacterium phage Cali]
          Length = 110

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  + A+  
Sbjct: 4   ADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM-AESS 62

Query: 286 ELELQKREEIAN 297
           + +L  + ++AN
Sbjct: 63  KFQLWLKRQVAN 74


>gi|225631245|ref|ZP_03787932.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591056|gb|EEH12251.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 178

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 45/78 (57%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L   E DS +A LE+ AG GG E+  +A ML RMY ++AE+R +K E + I +    G K
Sbjct: 101 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 160

Query: 167 SATLLIKGPNAYGWLKGE 184
            A+ LI G   +  LK E
Sbjct: 161 EASALINGTEVFARLKFE 178


>gi|84999208|ref|XP_954325.1| peptide chain release factor 1, mitochondrial precursor [Theileria
           annulata]
 gi|65305323|emb|CAI73648.1| peptide chain release factor 1, mitochondrial precursor, putative
           [Theileria annulata]
          Length = 194

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 15/97 (15%)

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-------------EIEISESDCRI 230
           E GVH++ R+   + + R H+S +++ V P   D +             E+E++ SD   
Sbjct: 76  EGGVHQVKRVPITEKSGRMHSSTATVAVLP--SDMVKGNDMNNFDKLVEEVELNPSDIEW 133

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
            T RASG GGQ+VN  +++V + H PTG+ ++C +ER
Sbjct: 134 KTCRASGPGGQNVNKVETSVSLYHKPTGIKIECSEER 170


>gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 172

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 39/54 (72%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            SG GGQ +N T+S V++TH PTG+VV CQ+ RSQ +N+ +A  +L  KL +++
Sbjct: 45  GSGPGGQKINKTNSKVQLTHKPTGIVVSCQESRSQDQNRKKAREILALKLEDIQ 98


>gi|39943940|ref|XP_361507.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea]
 gi|145014700|gb|EDJ99268.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 195

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 14/94 (14%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E EI ES       + SG GGQ +N T+SAV++ HIPTG+VV+CQ+ RS+ +N+  A  +
Sbjct: 67  ETEIEES-----FLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQL 121

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           L  +L +L         N G+ S++ I    +++
Sbjct: 122 LATRLDDL---------NNGDQSRSAIVGAHKVK 146


>gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 175

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 8/89 (8%)

Query: 203 HTSFSSIWVYPVVDDSIE--IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           HTS      +P++  S+   + + +SD   +  + SG GGQ +N T SAV++ HIPTG+V
Sbjct: 14  HTS------HPLLSKSLPPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIV 67

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           V+ Q  RS+  N+  A  +L+ ++ EL+L
Sbjct: 68  VKYQDTRSREINRKMARRILQDRIEELQL 96


>gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 171

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G GGQ +N ++S V++THIPTG VV CQ  RSQ +N+ +A  +L  KL EL+
Sbjct: 52  GPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103


>gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 171

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G GGQ +N ++S V++THIPTG VV CQ  RSQ +N+ +A  +L  KL EL+
Sbjct: 52  GPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103


>gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens
           PCA]
 gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
           KN400]
          Length = 126

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 9/88 (10%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D   E+ +SE+D      R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ  N+  
Sbjct: 18  DKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRF- 76

Query: 276 AWNMLRAKLYELELQKREEIANIGESSK 303
                   L   E+ +R E  N GES +
Sbjct: 77  --------LARREILERIERLNKGESPR 96


>gi|323486906|ref|ZP_08092222.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323691951|ref|ZP_08106201.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323399769|gb|EGA92151.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323504009|gb|EGB19821.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 197

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SPY    +R   +  + +     +++     E   R +T+R+ G GGQ+VN  ++ VR+ 
Sbjct: 70  SPYRPKHKRKNWYIDVSIL----ENMPKLTQELKLRFETFRSGGKGGQNVNKVETGVRVI 125

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNML 280
           HIPTG+ V   + RSQH NK  A N L
Sbjct: 126 HIPTGISVVSTEARSQHMNKKLAVNRL 152


>gi|149369402|ref|ZP_01889254.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
 gi|149356829|gb|EDM45384.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
          Length = 238

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 4/171 (2%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIK 173
           N   +++ AG G  E        L+   +         E +   +G E   I+S TL +K
Sbjct: 9   NTQIIQITAGRGPAECCWVVAQTLKFLIKELTATNITYEIISKENGFENRTIQSVTLQLK 68

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G     +L    G  + V  S +  + +R   F + +    V+++ ++E+  ++      
Sbjct: 69  GKQLDTFLANWLGTIQWVGTSTFRKHHKRKNWFIACFK---VEETNKLELVLNEVSFQAM 125

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R+SG GGQHVN   SA+R TH  +G+ V     RSQH+N+  A   L+ K+
Sbjct: 126 RSSGPGGQHVNKVSSAIRATHKKSGLQVVAMDSRSQHQNRKIAIKRLQEKV 176


>gi|148252694|ref|YP_001237279.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. BTAi1]
 gi|146404867|gb|ABQ33373.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. BTAi1]
          Length = 207

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 210 WVYPVVDDSIEIEISE---SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           W   +VD  +  ++ +   +D R +++RA G GGQH N T+SAVR  H+PTG+    +  
Sbjct: 90  WFVGIVDLPLPHQVPDLAAADVRCESFRAGGPGGQHQNKTESAVRAIHLPTGLTAIARDG 149

Query: 267 RSQHKN 272
           RSQH+N
Sbjct: 150 RSQHRN 155


>gi|224109198|ref|XP_002315120.1| predicted protein [Populus trichocarpa]
 gi|222864160|gb|EEF01291.1| predicted protein [Populus trichocarpa]
          Length = 59

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/48 (56%), Positives = 35/48 (72%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           ++SI+ E+ E D  I T RASG GGQ+VN  ++A RITH PTGV V+C
Sbjct: 6   EESIDAELPEEDLEITTSRASGRGGQNVNKVETAARITHTPTGVPVRC 53


>gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 142

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 49/91 (53%)

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S+S R + F+       +D S    + + D      R SG GGQ V  T++ V +TH PT
Sbjct: 8   SSSVRQSIFAITRFKTTIDVSKVPVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHKPT 67

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G+V+QC   RS  KN+ +A  +L  KL ELE
Sbjct: 68  GIVIQCHSSRSLFKNREEARRLLILKLDELE 98


>gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti]
 gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti]
 gi|108869799|gb|EAT34024.1| conserved hypothetical protein [Aedes aegypti]
 gi|108871632|gb|EAT35857.1| conserved hypothetical protein [Aedes aegypti]
          Length = 142

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 43/75 (57%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D S    + + D      R SG GGQ V  T++ V +TH PTG+V+QC   RS  KN+
Sbjct: 24  TIDTSKVPALRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNR 83

Query: 274 AQAWNMLRAKLYELE 288
            +A  +L AKL ELE
Sbjct: 84  EEARRLLVAKLDELE 98


>gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS
           513.88]
 gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger]
          Length = 198

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 8/107 (7%)

Query: 189 RLVRISPY------DSNSRRHTSFSSIWVYPVVDDSIE--IEISESDCRIDTYRASGAGG 240
           R + ++PY       SN      F ++    + D ++   ++I ++D  +   + +G GG
Sbjct: 3   RPLHLTPYITRPFLKSNYLPTPRFFTLSALSLADKALPPRLKIQDADVTVSYLKGTGPGG 62

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           Q +N T+SAV+I H PTGVVV+ Q  RS+ +N+  A  +L  K+ EL
Sbjct: 63  QKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLADKVEEL 109


>gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
 gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
          Length = 192

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 12/88 (13%)

Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P +DDS   EI+       TY + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +
Sbjct: 47  PTIDDS---EIT------GTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQ 97

Query: 272 NKAQAWNMLRAKLYELEL--QKREEIAN 297
           N+  A  +L  K+  LE   Q R  I N
Sbjct: 98  NRKIAKRILAEKIELLEKGEQSRAAIVN 125


>gi|283780964|ref|YP_003371719.1| peptide chain release factor I [Pirellula staleyi DSM 6068]
 gi|283439417|gb|ADB17859.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068]
          Length = 191

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 46/81 (56%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           ++ +E    +C+I+  R  G GGQH N  ++AV ITH PTG+  Q  + RSQ  N+ +A+
Sbjct: 30  ALPLEKLARECQIEFTRRGGPGGQHRNKVETAVVITHQPTGLAGQASETRSQDHNREEAY 89

Query: 278 NMLRAKLYELELQKREEIANI 298
             LR +L      +RE  A I
Sbjct: 90  QRLRIELATGLRTRREPTAPI 110


>gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC
           18224]
 gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC
           18224]
          Length = 177

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K    ++   R       S    SFS+     V       ++ + D      + +G G
Sbjct: 5   WSKAPNAIYTACR-------STNRPSFSTCPALAVKQLPPRPKLDDKDITGSYLKGTGPG 57

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIAN 297
           GQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L AK+  LE   Q RE I N
Sbjct: 58  GQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKIAKEILAAKVEVLEKGEQSREAIKN 117

Query: 298 IGESSKTEIGWGRQIRSY 315
             +  +      ++ R Y
Sbjct: 118 ALKKKRKASSMKKKRRKY 135


>gi|110224565|emb|CAJ98780.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
          Length = 101

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I   L     LLEL  E  D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKE--DESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
 gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
          Length = 180

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G GGQ +N ++S V++TH PTG+VV CQ  RSQ +N+ +A  +L  KL EL+
Sbjct: 64  GPGGQKINKSNSKVQLTHKPTGIVVTCQYSRSQEQNRKKAREILALKLEELQ 115


>gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
           10500]
 gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
           10500]
          Length = 174

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS+     V       ++ + D      + +G GGQ +N T+SAV++ H PTG+VV+ Q 
Sbjct: 26  FSTYPARAVKQLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQA 85

Query: 266 ERSQHKNKAQAWNMLRAKLYELEL--QKREEIANIGESSKTEIGWGRQIRSY 315
            RS+ +N+  A  +L AK+ ELE   Q RE I N  +  +      ++ R Y
Sbjct: 86  TRSRSQNQKIAREILAAKVEELEKGEQSREAIKNALKRKRKASSMKKKRRKY 137


>gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii]
          Length = 160

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 39/64 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI+E +      R SG GGQ  N T + V + HIP+G+ V+C Q RSQ KN+  +  +L
Sbjct: 49  VEINEDELDEQFVRGSGPGGQATNKTSNCVVLKHIPSGITVKCHQTRSQSKNRELSRRIL 108

Query: 281 RAKL 284
           R KL
Sbjct: 109 REKL 112


>gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
 gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
          Length = 190

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 12/88 (13%)

Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P +DDS   EI+       TY + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +
Sbjct: 47  PTIDDS---EIT------GTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQ 97

Query: 272 NKAQAWNMLRAKLYELEL--QKREEIAN 297
           N+  A  +L  K+  LE   Q R  I N
Sbjct: 98  NRKIAKRILAEKIELLEKGEQSRAAILN 125


>gi|298249625|ref|ZP_06973429.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
 gi|297547629|gb|EFH81496.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
          Length = 118

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 5/77 (6%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP+  DS+E      DC I+ + A G GGQH N  +S VR+ H P+G VV   + RSQ+ 
Sbjct: 6   YPIDRDSLE-----RDCTIEFFIAGGPGGQHRNKVESGVRLIHRPSGQVVTATERRSQYA 60

Query: 272 NKAQAWNMLRAKLYELE 288
           N+  A+  + A+L  L+
Sbjct: 61  NREMAFERMAARLERLQ 77


>gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980]
 gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 201

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 43/67 (64%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
            SG GGQ +N T SAV++ HIPTG+V++ Q  RS+ +N+  A  ML  ++  LE  K   
Sbjct: 71  GSGPGGQKINKTSSAVQLKHIPTGMVLKVQATRSRTQNRKIARQMLAERVELLEKGKESR 130

Query: 295 IANIGES 301
           +A +GE+
Sbjct: 131 VAIVGET 137


>gi|108758265|ref|YP_629628.1| peptidyl-tRNA hydrolase domain-containing protein [Myxococcus
           xanthus DK 1622]
 gi|108462145|gb|ABF87330.1| peptidyl-tRNA hydrolase domain protein [Myxococcus xanthus DK 1622]
          Length = 129

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C +D + ASG GGQH NTT S VR+TH PT + V   + RSQ +NK  A   LR  L  L
Sbjct: 30  CEVDYFIASGPGGQHRNTTASGVRLTHAPTELSVSATERRSQVQNKGVALERLREGLKVL 89

Query: 288 ELQKREEIANIGESSKTEIGWGRQ 311
                  +  +  ++K   G  R+
Sbjct: 90  TF-----VPKVRRATKPTAGSKRR 108


>gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 171

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQ +N T+S V++THIPTG+VV CQ  RSQ +N+A A   L  KL
Sbjct: 50  GPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKL 97


>gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818]
 gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97]
          Length = 191

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ES+      + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +N+  A  +L  
Sbjct: 49  IDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAE 108

Query: 283 KLYELEL--QKREEIAN 297
           K+  LE   Q R  I N
Sbjct: 109 KIELLEKGEQSRAAIVN 125


>gi|169840413|ref|ZP_02873601.1| peptide chain release factor 1 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 56

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 37/44 (84%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +VNTTDSAVRITH+PTG+VV  Q E+SQ KNK +A ++LR++L 
Sbjct: 13  NVNTTDSAVRITHLPTGLVVTNQDEKSQIKNKEKALSVLRSRLL 56


>gi|289178305|gb|ADC85551.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 115

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q E+SQ +N+A A  +L+++L  ++  Q+  E A++  S    +    
Sbjct: 1   MTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSE 60

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +IR+Y   P   + D RTN +  +   VLDGDL
Sbjct: 61  RIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 92


>gi|115372342|ref|ZP_01459651.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|310819555|ref|YP_003951913.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370555|gb|EAU69481.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|309392627|gb|ADO70086.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 939

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 46/332 (13%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R + L ++T+ P+LW +   A   +R  + ++  I+ ++ ++  +     L+  A  E 
Sbjct: 638 ERRNQLLSETQAPNLWDDPARAAATLRAFRTVEAQINELERMEQAVTFARRLVREAKNE- 696

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD-WANML 137
               +Q TS   Q  ++  E +  E+L +  A +ND  A +++   +   E+QD W   L
Sbjct: 697 ----VQLTSAAKQVEEVAREVQMSEALHASGATANDVEALVDICV-SDSVEAQDAWIQEL 751

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
             MY  WA+KR +  EA+ + + E        + I GP AYG+L GE G+HR +      
Sbjct: 752 ATMYLGWAQKRGY--EAMLVAEAESPA--RVVVRIAGPGAYGFLAGEAGLHRRI------ 801

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              +R  ++  +     +D   ++E+S     +  +   GA  + V T    V +    T
Sbjct: 802 EEEKRQRAYVRVHRGGALDAPEDLELSVEGRPVKQH--EGAFLERVRTE---VTVKDSAT 856

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G V+         + K  A  ++                  G+++ T+     + R Y L
Sbjct: 857 GRVLTLMGSGELDELKGIATRVVS-----------------GQATSTD-----EARRYYL 894

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                V+D RT        DVL GD+D F+ A
Sbjct: 895 GRGARVEDPRTGAGTPRVKDVLRGDMDLFIAA 926


>gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
           1]
 gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
           1]
          Length = 203

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS     P       ++I+++D  I   + +G GGQ +N T+SAV++ H PTG+VV+ Q 
Sbjct: 29  FSLTPYLPEKQLPPRLKINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQA 88

Query: 266 ERSQHKNKAQAWNMLRAKLYELE 288
            RS+ +N+  A  +L  K+ EL+
Sbjct: 89  TRSRSQNEKIARQILADKVEELQ 111


>gi|78224169|ref|YP_385916.1| class I peptide chain release factor [Geobacter metallireducens
           GS-15]
 gi|78195424|gb|ABB33191.1| Class I peptide chain release factor [Geobacter metallireducens
           GS-15]
          Length = 121

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 38/54 (70%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           E+ ++E+D      R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ  N+
Sbjct: 22  ELGVAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPTGIEVKCMKDRSQSVNR 75


>gi|213583737|ref|ZP_03365563.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 147

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 6/149 (4%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L++ +  G  E        L   T+ A + K     LE   G     ++SA + + G  A
Sbjct: 4   LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             + +   G    +  SPY  +  R       W   +   S +  I   + R +T R+SG
Sbjct: 64  MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            GGQHVN TDSAVR TH+ +G+ V+ Q E
Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSE 147


>gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+]
          Length = 187

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ES+      + SG GGQ +N T+SAV+I H+PT +V++CQ  RS+ +N+  A ++L  +L
Sbjct: 10  ESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTNIVIKCQATRSRSQNRKIARDILAERL 69

Query: 285 YELELQKREEIANIGESSK 303
            EL    +  +A +G   K
Sbjct: 70  DELYNGSQSRVAIVGSVKK 88


>gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa
           102]
          Length = 187

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 227 DCRIDT--YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           DC I+    + SG GGQ +N T+SAV++ H+PTG+VV+ Q  RS+ +N+  A  +L  K+
Sbjct: 42  DCEIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKV 101

Query: 285 YEL 287
            +L
Sbjct: 102 DDL 104


>gi|296121082|ref|YP_003628860.1| class I peptide chain release factor [Planctomyces limnophilus DSM
           3776]
 gi|296013422|gb|ADG66661.1| Class I peptide chain release factor [Planctomyces limnophilus DSM
           3776]
          Length = 203

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           D  ++ H S    W +PV+   +  E   S+C+    + SG GGQH N  ++ V + H P
Sbjct: 24  DPQTQPHASQIQGWKHPVL---LSHEQLLSECKARRQKTSGPGGQHRNKVETGVFLKHTP 80

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           TGV  Q  + RSQ +N+++A   LR +L
Sbjct: 81  TGVEAQATERRSQAENQSKALKRLRLQL 108


>gi|321255196|ref|XP_003193341.1| hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
 gi|317459811|gb|ADV21554.1| Hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
          Length = 316

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E +      R  G GGQ +N T+S+V +THIPTG+ VQ Q  RS+ +N+  A  +L
Sbjct: 126 VEIPEDELEERFVRGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRIL 185

Query: 281 RAKL 284
             +L
Sbjct: 186 AERL 189


>gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36]
 gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36]
          Length = 171

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 34/48 (70%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQ +N ++S V++THIPTG+VV CQ  RSQ +N+A A   L  KL
Sbjct: 50  GPGGQKINKSNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKL 97


>gi|189425837|ref|YP_001953014.1| class I peptide chain release factor [Geobacter lovleyi SZ]
 gi|189422096|gb|ACD96494.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
          Length = 124

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 42/71 (59%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +V    E+ + E +      RASG GGQH+N T SAV++ H+PTG+  +C +ERSQ  N+
Sbjct: 16  LVSRMAELGVKEEELEEQFVRASGRGGQHLNKTSSAVQVRHLPTGIEARCGRERSQSLNR 75

Query: 274 AQAWNMLRAKL 284
             A   L  K+
Sbjct: 76  FLARRELLEKI 86


>gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS
           6054]
 gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 156

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           G GGQ +N ++S V++TH+PTG+VV CQ  RSQ  N+ +A  +L  KL +L
Sbjct: 32  GPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILALKLDDL 82


>gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 156

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 14/118 (11%)

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP---VVDDSIEIEISESDCRIDTYRASG 237
           L G   + +L+R+ P          F  ++      ++D  +   ++E D      R SG
Sbjct: 20  LTGSSNIFQLLRVRP--------PGFLCVFAAGKKGLIDPPV---LNEDDLEEQFVRGSG 68

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            GGQ  N T + V + HIP+G+VV+C Q RS   N+ +A +++R KL  L+  +  EI
Sbjct: 69  PGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDINRKRARDIMREKLDVLQKGELSEI 126


>gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta]
          Length = 220

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           Y++   R+ SF     Y  V      +++E+D      R SG GGQ  N T++AV + H 
Sbjct: 91  YENIQVRNKSFKHYLDYSNVP-----KLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHK 145

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE---EIANIGESSKTEIGWGRQI 312
           PTG +V+C + RSQ  NK +A  +L  KL  L  ++R    +I  + E  +T   + R+ 
Sbjct: 146 PTGFIVKCHETRSQWDNKKRAREILITKLDNLLNKERSIEAQIRALEEKQQTRKEYKRKK 205

Query: 313 R 313
           R
Sbjct: 206 R 206


>gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB]
 gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB]
          Length = 136

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           ISE D R    R+SG GGQ+VN T + V + H+PTG+ V+CQQ+RSQ  N
Sbjct: 20  ISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVN 69


>gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1]
          Length = 189

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 11/101 (10%)

Query: 193 ISPYDSNSRRHTSFSSIWVY------PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           I+P    +    +FSS  +Y      P      E EI ES       + SG GGQ +N T
Sbjct: 11  IAPRSPFASPTCTFSSTSIYLAKALPPRPKPPPESEIEES-----YVKGSGPGGQKINKT 65

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           +SAV++ H+PTG+VV+ Q  RS+ +N+  A  +L  ++ EL
Sbjct: 66  NSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRVDEL 106


>gi|134115677|ref|XP_773552.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256178|gb|EAL18905.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 315

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E +      +  G GGQ +N T+S+V +THIPTG+ VQ Q  RS+ +N+  A  +L
Sbjct: 125 VEIPEDELEERFVKGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRIL 184

Query: 281 RAKL 284
             +L
Sbjct: 185 AERL 188


>gi|294658124|ref|XP_460455.2| DEHA2F02090p [Debaryomyces hansenii CBS767]
 gi|202952893|emb|CAG88762.2| DEHA2F02090p [Debaryomyces hansenii]
          Length = 180

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 37/52 (71%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G GGQ +N ++S V++TH PTG+VV CQ  RSQ +N+ +A  +L  KL EL+
Sbjct: 53  GPGGQKINKSNSKVQLTHKPTGLVVTCQYSRSQEQNRKRAREILALKLDELQ 104


>gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
           77-13-4]
 gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
           77-13-4]
          Length = 186

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           +SP+ S  R  T  S+     +        E EI ES  +      SG GGQ +N T+SA
Sbjct: 15  LSPFGSPVRTFTIISTQLAKALPPRPKPPPEFEIEESYVK-----GSGPGGQKINKTNSA 69

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           V++ HIPTG+VV+ Q  RS+ +N+  A  +L  ++ E     +   A +G+
Sbjct: 70  VQLKHIPTGIVVKSQATRSRDQNRKHARELLAQRVDEFHNGDQSRSAIVGQ 120


>gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST]
 gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST]
          Length = 151

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 190 LVRISPYDSNSRRHTSFSSIW---VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           L+R    +S ++     +S W   +  VVD S    + + D      R SG GGQ V  T
Sbjct: 4   LLRCVALESTAQWKALSASPWRRCLSKVVDHSRLPVLRDEDLEESFVRGSGPGGQAVAKT 63

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           ++ V +TH PTG+VVQC   RS  +N+ +A  ML  KL +L
Sbjct: 64  NNKVVLTHKPTGIVVQCHTTRSLFENRREARKMLIGKLDQL 104


>gi|148912865|ref|YP_001293444.1| hypothetical protein ORF037 [Pseudomonas phage 73]
          Length = 164

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + +  +D RIDT+R  GA    V + ++ VRITHIPTGV V+    RS H NK+ A   L
Sbjct: 1   MNLDPADIRIDTFRKPGASA-WVASVETCVRITHIPTGVFVERCDLRSAHANKSAAMADL 59

Query: 281 RAKLYELELQK 291
           R KL E+   K
Sbjct: 60  RKKLDEMPKAK 70


>gi|325110517|ref|YP_004271585.1| class I peptide chain release factor [Planctomyces brasiliensis DSM
           5305]
 gi|324970785|gb|ADY61563.1| Class I peptide chain release factor [Planctomyces brasiliensis DSM
           5305]
          Length = 168

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           S+C +   R SG GGQH N  ++A+RI H PTGV  Q  + RSQ +N+  A   LR +L
Sbjct: 13  SECDVTRQRRSGPGGQHRNKVETAIRIEHRPTGVTGQASERRSQEENRKVALFRLRVEL 71


>gi|253730877|ref|ZP_04865042.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725386|gb|EES94115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 59

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 5   EGNKSDIGWGNQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 55


>gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A]
 gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa]
 gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A]
          Length = 172

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 38/51 (74%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+  A  +L AK+
Sbjct: 18  KGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREILAAKV 68


>gi|213616409|ref|ZP_03372235.1| hypothetical protein SentesTyp_18844 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 65

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           QK+       E +K++IGWG QIRSYVL   + +KDLRT +E  +   VLDG LD F++A
Sbjct: 1   QKKNAEKQAMEDTKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEA 59

Query: 350 TL 351
           +L
Sbjct: 60  SL 61


>gi|330467788|ref|YP_004405531.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
 gi|328810759|gb|AEB44931.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
          Length = 202

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 5/168 (2%)

Query: 119 LEVHAGAGGTESQDWA-NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL-IKGPN 176
           L + AG G  E   WA   LLR     A +++ +   ++   G+  G   + L+ + G  
Sbjct: 5   LLLSAGRGPQECA-WALAHLLRRLEAEAARQRLRVHRVDTVAGDRPGTYRSVLVEVGGAG 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              +     G       SPY +   R   + +    P   D+   E  ESD  +   R  
Sbjct: 64  VEAFAASWTGTLCWQAPSPYRAGVGRKNWYVTAQPCPADPDATCFE--ESDVEVVACRTG 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQH N   +AVR TH PTG+VV    ER    N+  A  +LR +L
Sbjct: 122 GPGGQHRNKVSTAVRATHRPTGLVVVVDTERQFSLNRRIALRLLRQRL 169


>gi|289613196|emb|CBI59790.1| unnamed protein product [Sordaria macrospora]
          Length = 250

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 38/51 (74%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+  A  +L AK+
Sbjct: 94  KGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREILAAKV 144


>gi|116878616|ref|YP_357940.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
 gi|114843252|gb|ABA89770.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
          Length = 138

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I++ D  I  ++A G GGQH N T++AVRI H P+G+ V   + RS+  N   A   L
Sbjct: 32  MTINKQDLDITFFKAGGPGGQHRNKTETAVRIHHRPSGITVTASERRSRQANIEHALERL 91

Query: 281 RAKLYELELQKREEIA 296
             +L  +  + R  IA
Sbjct: 92  AQRLEAMRRKPRRRIA 107


>gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar]
 gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar]
          Length = 166

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 33/51 (64%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R SG GGQ  N T + V + HIPTG+VV+C Q RS   N+ +A  ++R KL
Sbjct: 62  RGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKRARQIMREKL 112


>gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar]
          Length = 166

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 33/51 (64%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R SG GGQ  N T + V + HIPTG+VV+C Q RS   N+ +A  ++R KL
Sbjct: 62  RGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKRARRIMREKL 112


>gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
          Length = 193

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           + SG GGQ +N T SAV++ HIPTGVVV+ Q  RS+ +N+  A  +L  KL +L+   + 
Sbjct: 59  KGSGPGGQKINKTSSAVQLKHIPTGVVVKSQATRSRTQNRKIAREILAQKLDDLQNGDQS 118

Query: 294 EIANIGE 300
             A +GE
Sbjct: 119 RSAIVGE 125


>gi|298369317|ref|ZP_06980635.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298283320|gb|EFI24807.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 106

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSY 315
           +VV+CQ  RSQH NKAQA  +L A+L   + QKRE  A      K+ IG G +   IR+Y
Sbjct: 1   MVVECQDGRSQHANKAQAMKVLAARLN--DAQKREAQAKEAAERKSLIGSGDRSECIRTY 58

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R N+       V+DGDL++   A +A
Sbjct: 59  NY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 94


>gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
           181]
 gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
           181]
          Length = 208

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I P  S  R  T  SS+    +      ++I ++D  +   + +G GGQ +N T+SAV++
Sbjct: 26  IHPPPSLRRSFTLASSLSAKQL---PPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQL 82

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL
Sbjct: 83  IHKPTGIVVKSQATRSRSQNEKIARQILADKVEEL 117


>gi|12329992|emb|CAC24560.1| mitochondrial peptide chain release factor [Platichthys flesus]
          Length = 183

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 6/128 (4%)

Query: 113 DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           DS++  LEV +G   GG   Q +   +  MY  +A  + +  E       +  G+  A +
Sbjct: 56  DSSNDLLEVVSGRTTGGDICQQFTKEMFDMYQGFAFYKNWDFEVYNYTSADFGGLHHAAV 115

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESD 227
            I G N Y  LK E G HR+ RI     +SR    HT   ++ + P   +  ++ I   D
Sbjct: 116 RIAGDNVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPVE-FDVHIDPKD 174

Query: 228 CRIDTYRA 235
            RIDT+RA
Sbjct: 175 LRIDTFRA 182


>gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
 gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
          Length = 236

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 46/84 (54%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S   +        + + +SD        SG GGQ +N T SAV++ HIPTG+VV+ Q 
Sbjct: 24  FTSTRTHLAKSLPPRVPLPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPTGIVVKYQD 83

Query: 266 ERSQHKNKAQAWNMLRAKLYELEL 289
            RS+  N+  A  +L+ ++ E EL
Sbjct: 84  TRSRTVNRKMARKILQERIEEAEL 107


>gi|195611870|gb|ACG27765.1| peptide chain release factor 2 [Zea mays]
          Length = 262

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   LL G  D   A + V A + G  S+ WA  +  MYT WA K+ +K   +E      
Sbjct: 157 QMYKLLKGPYDKEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTS 216

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
             I+SAT+ I+    +G L GE+G+H+++  S  +S+
Sbjct: 217 GHIQSATMEIESEYMFGTLSGEKGMHQMIYSSIENSD 253


>gi|187607772|ref|NP_001119948.1| hypothetical protein LOC100004874 [Danio rerio]
 gi|162416112|sp|A5WUX7|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65
           homolog, mitochondrial; Flags: Precursor
 gi|148726035|emb|CAN87842.1| novel protein [Danio rerio]
          Length = 156

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 211 VYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           V P      +IE   + E +      R SG GGQ  N T + V + HIP+G+VV+C + R
Sbjct: 27  VLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETR 86

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           S   N+ +A  +LR KL         E+A  GE S
Sbjct: 87  SVDLNRKRAREILREKL---------EVAYKGEES 112


>gi|271961827|ref|YP_003336023.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270505002|gb|ACZ83280.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 219

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 5/169 (2%)

Query: 118 YLEVHAGAGGTESQDWA-NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL-IKGP 175
           +L + AG G  E   WA   LLR     A ++  +T   +   G+      + L+ I G 
Sbjct: 4   HLLLSAGRGPQECA-WALARLLRRLEADATRQNLETHRAQTVPGDRPDTYRSVLIQISGA 62

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  +     G       SPY + + R   +  +   P   D+     +E+D  I   R 
Sbjct: 63  GAEAFAASWTGTLCWQAPSPYRAGTGRKNWY--VIAQPCQVDTPRTTFAEADVDIVACRT 120

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            G GGQH N   +AVR TH P+G+VV    ER    N+  A  +LR ++
Sbjct: 121 GGPGGQHRNKASTAVRATHRPSGIVVVVDTERQFSLNRRIAMRLLRQRI 169


>gi|219362723|ref|NP_001136772.1| hypothetical protein LOC100216914 [Zea mays]
 gi|194697000|gb|ACF82584.1| unknown [Zea mays]
          Length = 262

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   LL G  D   A + V A + G  S+ WA  +  MYT WA K+ +K   +E      
Sbjct: 157 QMYKLLKGPYDKEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTS 216

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
             I+SAT+ I+    +G L GE+G+H+++  S  +S+
Sbjct: 217 GHIQSATMEIESEYMFGTLSGEKGMHQMIYSSLENSD 253


>gi|148726036|emb|CAN87843.1| novel protein [Danio rerio]
          Length = 137

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 211 VYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           V P      +IE   + E +      R SG GGQ  N T + V + HIP+G+VV+C + R
Sbjct: 8   VLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETR 67

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           S   N+ +A  +LR KL         E+A  GE S
Sbjct: 68  SVDLNRKRAREILREKL---------EVAYKGEES 93


>gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial [Danio rerio]
          Length = 156

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 211 VYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           V P      +IE   + E +      R SG GGQ  N T + V + HIP+G+VV+C + R
Sbjct: 27  VLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETR 86

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           S   N+ +A  +LR KL         E+A  GE S
Sbjct: 87  SVDLNRKRAREILREKL---------EVAYKGEES 112


>gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae
           ARSEF 23]
          Length = 182

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 38/54 (70%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           + SG GGQ +N T+SAV++ H+PTG+VV+ Q  RS+ +N+  A  +L  K+ +L
Sbjct: 51  KGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDDL 104


>gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum]
          Length = 141

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V+P        EI   DC       SG GGQ VNT  +AV + HIPTG+VV+  + R  
Sbjct: 32  YVFP--------EIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPTGIVVKVHESRLL 83

Query: 270 HKNKAQAWNMLRAK 283
            KN   A+  LR K
Sbjct: 84  PKNIEIAYERLRLK 97


>gi|156552109|ref|XP_001605206.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
           vitripennis]
          Length = 159

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           +D S   +I+E D  I   R SG GGQ  N T + V + H+PTG+V++C + RSQ +N
Sbjct: 37  IDTSKVPKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRSQTQN 94


>gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Anolis carolinensis]
          Length = 197

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 40/64 (62%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + ++E+D      R SG GGQ  N T + V + H+P+G+VV+C Q RS  +N+ +A  +L
Sbjct: 86  LPLNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPSGIVVKCHQTRSVEQNRKKARTIL 145

Query: 281 RAKL 284
           + K+
Sbjct: 146 QEKV 149


>gi|238494178|ref|XP_002378325.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
           NRRL3357]
 gi|317148917|ref|XP_003190253.1| peptidyl-tRNA hydrolase domain protein [Aspergillus oryzae RIB40]
 gi|220694975|gb|EED51318.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
           NRRL3357]
          Length = 176

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 45/68 (66%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +++ ++D  I   + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L
Sbjct: 39  LKLHDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQNEKIARQLL 98

Query: 281 RAKLYELE 288
             K+ +LE
Sbjct: 99  ADKVEQLE 106


>gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           Af293]
 gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           Af293]
 gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           A1163]
          Length = 208

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I P  S  R  T  SS+    +      ++I ++D  +   + +G GGQ +N T+SAV++
Sbjct: 26  IHPPPSLRRSFTLASSLSAKQLPP---RLKIDDADLTVSYLKGTGPGGQKINKTNSAVQL 82

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL
Sbjct: 83  IHKPTGIVVKSQATRSRSQNEKIARQILADKVEEL 117


>gi|46203521|ref|ZP_00208999.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 51

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/37 (67%), Positives = 31/37 (83%)

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +LQPYQ+VKDLRT  + T P +VLDGDLD FM+A+LA
Sbjct: 1   MLQPYQLVKDLRTGTQSTDPDEVLDGDLDPFMEASLA 37


>gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys
           calcitrans]
          Length = 183

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 206 FSSIWVYPV----VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           FSS+  Y +    +D S    ++E D      R SG GGQ +N T + V + H+PT +VV
Sbjct: 41  FSSLLFYRLKHQQLDYSRYPTLNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTNIVV 100

Query: 262 QCQQERSQHKNKAQAWNMLRAKL 284
           +C   RS  KN+ +A  +L  KL
Sbjct: 101 KCHIHRSAQKNRVEARKILLEKL 123


>gi|71900159|ref|ZP_00682300.1| PCRF [Xylella fastidiosa Ann-1]
 gi|71730108|gb|EAO32198.1| PCRF [Xylella fastidiosa Ann-1]
          Length = 270

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 39/70 (55%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  + +LEV AG GG E+  +A  L RMYTR+AE++++K E      GE  G K     I
Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166

Query: 173 KGPNAYGWLK 182
            G  AY  LK
Sbjct: 167 VGRGAYSRLK 176


>gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem]
 gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis
           Bem]
          Length = 132

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E+ +SE         ASG GGQHVN + S V + H+PTGV V+C + RSQ  N+  A  +
Sbjct: 20  ELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRL 79

Query: 280 LRAKL 284
           L  K+
Sbjct: 80  LLEKI 84


>gi|197123884|ref|YP_002135835.1| class I peptide chain release factor [Anaeromyxobacter sp. K]
 gi|196173733|gb|ACG74706.1| Class I peptide chain release factor [Anaeromyxobacter sp. K]
          Length = 128

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L 
Sbjct: 29  AECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQ 88

Query: 286 EL 287
            L
Sbjct: 89  PL 90


>gi|156837376|ref|XP_001642715.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113276|gb|EDO14857.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 162

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 4/64 (6%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  ++ +E E +ES      +   G GGQ +N ++S V++ HIPTG+VV+CQ+ RS+ +N
Sbjct: 26  PKFNEQLETECTESF----MHGGRGPGGQKINKSNSKVQLKHIPTGIVVECQETRSRDQN 81

Query: 273 KAQA 276
           +  A
Sbjct: 82  RKIA 85


>gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum]
          Length = 179

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%)

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           SI  +  +D S   ++ ES+      R SG GGQ  N T + V + H+PTG+VV+C + R
Sbjct: 57  SIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCHETR 116

Query: 268 SQHKNKAQAWNMLRAKLYEL 287
           S  +N+ +A   L  KL  L
Sbjct: 117 SLDQNRKKARQYLVTKLDNL 136


>gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21]
 gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21]
          Length = 132

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E+ +SE         ASG GGQHVN + S V + H+PTGV V+C + RSQ  N+  A  +
Sbjct: 20  ELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRL 79

Query: 280 LRAKL 284
           L  K+
Sbjct: 80  LLEKI 84


>gi|189911793|ref|YP_001963348.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776469|gb|ABZ94770.1| Peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
          Length = 131

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ESD +    +ASG GGQ+VN   +AV + H+PTG  V+C   RSQ  N+ +A ++L  
Sbjct: 27  IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLL-- 84

Query: 283 KLYELELQKREE 294
              ELE ++R E
Sbjct: 85  -CLELEKEQRPE 95


>gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum]
          Length = 132

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%)

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           SI  +  +D S   ++ ES+      R SG GGQ  N T + V + H+PTG+VV+C + R
Sbjct: 10  SIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCHETR 69

Query: 268 SQHKNKAQAWNMLRAKLYEL 287
           S  +N+ +A   L  KL  L
Sbjct: 70  SLDQNRKKARQYLVTKLDNL 89


>gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Meleagris gallopavo]
          Length = 165

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 40/64 (62%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++++E++ +    R  G GGQ  N T + V + H+P+G+VV+C Q RS  KN+  A  +L
Sbjct: 54  VQLTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREIL 113

Query: 281 RAKL 284
           + K+
Sbjct: 114 QEKV 117


>gi|220918650|ref|YP_002493954.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956504|gb|ACL66888.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 123

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L 
Sbjct: 24  AECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQ 83

Query: 286 EL 287
            L
Sbjct: 84  PL 85


>gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus
           floridanus]
          Length = 138

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 19/106 (17%)

Query: 195 PYDSNS-RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           P  S S +RH  +S +   P +D        E+D      R SG GGQ  N T++AV + 
Sbjct: 13  PVRSKSYKRHLDYSKV---PKLD--------EADLEEKFIRGSGPGGQATNKTNNAVSLK 61

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-------YELELQKR 292
           H PTG+VV+C + RS   NK +A  ++  KL       Y +E Q R
Sbjct: 62  HKPTGLVVKCHETRSLWDNKKRAREIMITKLDNLLNKEYSIEAQIR 107


>gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1]
 gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1]
          Length = 131

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + + + + E D R    R SG GGQ +N T S V + H PTGV V+CQ ERSQ  N+  A
Sbjct: 12  NRLGVRVEEVDERF--VRGSGPGGQKINKTSSTVWLRHGPTGVEVRCQAERSQAANREVA 69

Query: 277 WNMLRAKL 284
           W  L  KL
Sbjct: 70  WWELCEKL 77


>gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia]
          Length = 723

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI ++D      +  G GGQ +N T + V++TH PTG+ ++CQ+ R    NK  A   L
Sbjct: 611 VEIHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPTGIQIKCQKSRDLETNKNYAIKAL 670

Query: 281 RAKLYELELQKREEIANI 298
           + KL E ++     +ANI
Sbjct: 671 KEKLDE-QINGTNSLANI 687


>gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
 gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
          Length = 257

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T + V++ H PTG+ V CQ+ RS  +N+ +A  ++ 
Sbjct: 152 ELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPTGIRVVCQETRSLEQNRKRARKIMI 211

Query: 282 AKLYEL 287
           AKL +L
Sbjct: 212 AKLDQL 217


>gi|322421630|ref|YP_004200853.1| Class I peptide chain release factor [Geobacter sp. M18]
 gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18]
          Length = 143

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++ ++E D       ASG GGQHVN + S V + HIP+G+ V+C + RSQ  N+  A  +
Sbjct: 20  QLGVAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPSGLEVKCMESRSQSLNRFLARRL 79

Query: 280 LRAKL 284
           L  KL
Sbjct: 80  LLEKL 84


>gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia
           clavigera kw1407]
          Length = 149

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L A+L EL    + 
Sbjct: 61  KGTGPGGQKINKTNSAVQLIHRPTGIVVKSQATRSRSQNRTIARQVLAARLDELHNGSQS 120

Query: 294 EIANIGESSK 303
             A + +S +
Sbjct: 121 RTAIVADSKR 130


>gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
           HRM2]
 gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
           HRM2]
          Length = 118

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 37/61 (60%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++ I+++D      + SG GGQ VN T  AV + H+PTG+ V+C  ERSQH N+  A   
Sbjct: 18  DLGINKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPTGITVKCGSERSQHLNRFLALRR 77

Query: 280 L 280
           L
Sbjct: 78  L 78


>gi|183221718|ref|YP_001839714.1| putative translation release factor [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|167780140|gb|ABZ98438.1| Putative translation release factor [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 110

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ESD +    +ASG GGQ+VN   +AV + H+PTG  V+C   RSQ  N+ +A ++L  
Sbjct: 6   IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLL-- 63

Query: 283 KLYELELQKREE 294
              ELE ++R E
Sbjct: 64  -CLELEKEQRPE 74


>gi|118581341|ref|YP_902591.1| class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
 gi|118504051|gb|ABL00534.1| Class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
          Length = 117

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 34/53 (64%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           + + E D      R+SG+GGQHVN T S+V + HIP+G+ V   +ERSQ  N+
Sbjct: 21  LNVREEDLEEQFVRSSGSGGQHVNKTSSSVFLRHIPSGICVSASRERSQSVNR 73


>gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni]
 gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni]
          Length = 167

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IE    ESD      R SG GGQ VN T + V + H+PT + ++C   R   KN+ +A  
Sbjct: 51  IEFSFKESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNLTIKCHTHRLASKNRIEARK 110

Query: 279 MLRAKLYE 286
           +L  KL E
Sbjct: 111 LLLEKLDE 118


>gi|110224725|emb|CAJ98860.1| peptide release factor protein 2 [Francisella philomiragia]
 gi|110224727|emb|CAJ98861.1| peptide release factor protein 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 101

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L R++  L+N +   + I + L     LLELA E++  S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEEDE--SLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWA 101


>gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria]
          Length = 169

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 3/60 (5%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL---YELEL 289
            R SG GGQ  N T + V + HIP+G VV+C Q RS   N+ +A +++R KL   Y+ EL
Sbjct: 64  VRGSGPGGQATNKTGNCVVLKHIPSGTVVKCHQTRSVDINRKRARDIMREKLDVVYKGEL 123


>gi|153006316|ref|YP_001380641.1| class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5]
 gi|152029889|gb|ABS27657.1| Class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5]
          Length = 122

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 34/60 (56%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C    +   G GGQH N T+SAVR+ H PTGV V   + RSQ +N+  A   LR +L  L
Sbjct: 25  CEETFFVGGGPGGQHRNKTESAVRLVHRPTGVTVTATERRSQLQNREAALARLRERLGPL 84


>gi|255725070|ref|XP_002547464.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240135355|gb|EER34909.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 172

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           G GGQ +N  +S V++ HIPTG+V+ CQ  RS+ +N+A A   L  KL
Sbjct: 51  GPGGQKINKCNSKVQLKHIPTGIVIDCQATRSKEQNRAIAREKLALKL 98


>gi|189183342|ref|YP_001937127.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180113|dbj|BAG39893.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 86

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/53 (43%), Positives = 35/53 (66%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           +N  D AV+ITHIPT ++ +C+  +S +KNK +A   L+  LYE EL+K   +
Sbjct: 18  INPVDYAVKITHIPTSIITECRSYKSHYKNKIEAILSLKKTLYERELKKNSSM 70


>gi|213583753|ref|ZP_03365579.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 166

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 36/54 (66%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K
Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYK 160


>gi|110224561|emb|CAJ98778.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis]
 gi|110224571|emb|CAJ98783.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis ATCC 6223]
 gi|110224573|emb|CAJ98784.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis]
 gi|110224575|emb|CAJ98785.1| peptide release factor protein 2 [Francisella novicida]
          Length = 101

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 37/50 (74%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +QE + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 52  MQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|110224557|emb|CAJ98776.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
 gi|110224559|emb|CAJ98777.1| peptide release factor protein 2 [Francisella novicida]
 gi|110224563|emb|CAJ98779.1| peptide release factor protein 2 [Francisella novicida]
 gi|110224587|emb|CAJ98791.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
          Length = 101

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 37/50 (74%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +QE + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 52  MQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|86159828|ref|YP_466613.1| class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776339|gb|ABC83176.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 123

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L 
Sbjct: 24  AECDESFFVGGGPGGQHRNKTESGVRLVHRPTEITVTATERRSQLQNRGAALERLRARLQ 83

Query: 286 EL 287
            L
Sbjct: 84  PL 85


>gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi]
          Length = 225

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 41/73 (56%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D+S    + E D      R SG GGQ V  T++ V +TH PTG+VVQC   RS  +N+ 
Sbjct: 106 IDNSRVPVLQEDDLEESFVRGSGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRSLFENRR 165

Query: 275 QAWNMLRAKLYEL 287
            A  +L  KL +L
Sbjct: 166 IARQLLVTKLDQL 178


>gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 136

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 39/65 (60%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ ESD      R+SG GGQ+VN   + V + H PTG+ V+C++ER Q  N+  A  +L 
Sbjct: 22  KVQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPTGIEVKCRRERIQGLNRFFARRLLA 81

Query: 282 AKLYE 286
            K+ E
Sbjct: 82  EKIEE 86


>gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
 gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
          Length = 127

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D      R+SG GGQHVN T + V + H PTG+ V+C +ERSQ  N+  A    R 
Sbjct: 23  VREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPTGIEVKCMRERSQSLNRFLA----RR 78

Query: 283 KLYELELQKREEIANIGE 300
           +L E +++ R  IA  G+
Sbjct: 79  ELLE-KIEARAGIATAGD 95


>gi|115756417|ref|XP_001202254.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115938185|ref|XP_798467.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 156

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R SG GGQ  N T + V + HIPTG+VV+C Q RSQ +N+  A  +++ +L
Sbjct: 43  RGSGPGGQATNKTSNCVVLKHIPTGLVVKCHQTRSQSENQKIARLLMKERL 93


>gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis]
 gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis]
          Length = 141

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T++ V + H+PTG+ V+C   R   KN+ +A  +L  
Sbjct: 32  LQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRLASKNRIEARKILLE 91

Query: 283 KL 284
           KL
Sbjct: 92  KL 93


>gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos
           saltator]
          Length = 165

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ E+D +    R SG GGQ  N T++AV + H PTG+VV+C + RS   N+ +A  +L 
Sbjct: 57  KLEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPTGIVVKCHETRSLWDNQKRARELLV 116

Query: 282 AKL 284
            KL
Sbjct: 117 TKL 119


>gi|196230546|ref|ZP_03129408.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
 gi|196225476|gb|EDY19984.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
          Length = 132

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 29/47 (61%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           R+SG GGQHVN   +AV + H+P+G  V  Q  RSQ  N+  AW  L
Sbjct: 31  RSSGPGGQHVNKVSTAVMLRHVPSGAAVTVQDTRSQSMNRQLAWTRL 77


>gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae]
          Length = 138

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 11/85 (12%)

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           S++H  +S +   P ++        E D      + SG GGQ V+ T S + + HIPTG+
Sbjct: 19  SKKHIDYSQV---PALN--------EQDLEEKQVKGSGPGGQKVSKTSSCIVLKHIPTGI 67

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKL 284
           VV+CQ+ RS  +NK  A   L  KL
Sbjct: 68  VVKCQETRSVLQNKKIARLHLITKL 92


>gi|324558223|gb|ADY49829.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 51

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/42 (54%), Positives = 30/42 (71%)

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +I+T RASG GGQ+VN   +AVR+TH  +G+ V C  ER QH
Sbjct: 7   KIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQH 48


>gi|115378407|ref|ZP_01465569.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310819398|ref|YP_003951756.1| peptidyl-tRNA hydrolase domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364597|gb|EAU63670.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392470|gb|ADO69929.1| Peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 125

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 35/60 (58%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C ++ + ASG GGQH NTT S VR+TH  T + V   + RSQ +NK  A   LR  L  L
Sbjct: 26  CEVEYFIASGPGGQHRNTTASGVRLTHPSTELSVTATERRSQIQNKGVALERLREGLKVL 85


>gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius]
          Length = 167

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R SG GGQ  N T + V + H PTG+VV+C Q RS   N+ +A  ++R KL
Sbjct: 63  RGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRARQIMREKL 113


>gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius]
          Length = 167

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R SG GGQ  N T + V + H PTG+VV+C Q RS   N+ +A  ++R KL
Sbjct: 63  RGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRARQIMREKL 113


>gi|195161900|ref|XP_002021796.1| GL26306 [Drosophila persimilis]
 gi|194103596|gb|EDW25639.1| GL26306 [Drosophila persimilis]
          Length = 313

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V+AGAGG E+  +A  L  MYT + E   ++ E       +  G++ A +++ G +A+ W
Sbjct: 135 VNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIGGLRHANVMVNGADAFHW 194

Query: 181 LKGEQGVHRL 190
           L+ E GVHR+
Sbjct: 195 LRFEAGVHRV 204


>gi|110224567|emb|CAJ98781.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224577|emb|CAJ98786.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224579|emb|CAJ98787.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224581|emb|CAJ98788.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224583|emb|CAJ98789.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224585|emb|CAJ98790.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
          Length = 101

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 36/50 (72%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +QE + + Q +  E+E  +F  + SG+ D+N A+L++ +G+GGTE+QDWA
Sbjct: 52  MQEIAKDTQNVASEIEKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWA 101


>gi|302343659|ref|YP_003808188.1| class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
 gi|301640272|gb|ADK85594.1| Class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
          Length = 113

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 38/60 (63%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E +   + +RASG GGQH N  ++ VR+TH+P+G+VV   + RS+ +N+  A   L  +L
Sbjct: 9   EHELSWEYFRASGPGGQHRNKVETGVRLTHLPSGLVVSATERRSREQNRQAALERLARRL 68


>gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R]
          Length = 268

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+  A  +L 
Sbjct: 161 ELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRILL 220

Query: 282 AK---LYELELQKRE 293
            K   LY   L K+E
Sbjct: 221 GKLDALYNPGLSKQE 235


>gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis]
 gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis]
 gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis]
 gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis]
          Length = 142

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 39/70 (55%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D S    + ESD      R SG GGQ VN T++ V + H+PTG+ V+C   R   KN+ 
Sbjct: 24  LDYSRYPSLQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRLASKNRI 83

Query: 275 QAWNMLRAKL 284
           +A  +L  KL
Sbjct: 84  EARKILLDKL 93


>gi|222053782|ref|YP_002536144.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
 gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
          Length = 139

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D      R+SG GGQHVN T + V + H PTG+ V+C  ERSQ  N+  A   L  
Sbjct: 23  VREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPTGIEVKCMAERSQSLNRFLARRQLLE 82

Query: 283 KL 284
           K+
Sbjct: 83  KI 84


>gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
 gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
          Length = 125

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I   D      + SG GGQ VN + + V + H PTG+V++C Q RSQ+ N+  A  +L+
Sbjct: 20  QIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPTGIVIKCHQSRSQYHNRIIARQLLK 79

Query: 282 AKL 284
            K+
Sbjct: 80  DKI 82


>gi|145594573|ref|YP_001158870.1| class I peptide chain release factor [Salinispora tropica CNB-440]
 gi|145303910|gb|ABP54492.1| Class I peptide chain release factor [Salinispora tropica CNB-440]
          Length = 202

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 45/98 (45%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D      +E+D  +   R  G GGQH N   +AVR TH PTG VV    ER    N++ A
Sbjct: 102 DVPVTPFTEADVEVLAVRTGGPGGQHRNKASTAVRATHRPTGTVVVVDTERQLSLNRSIA 161

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             +LR ++   +   R  +  I   +  E+  G   R+
Sbjct: 162 LRLLRQRITAGDEAARRALVAIRRRAHDEVVRGGPTRT 199


>gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R]
 gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R]
          Length = 275

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+  A  +L 
Sbjct: 166 ELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRILL 225

Query: 282 AK---LYELELQKRE 293
            K   LY   L K+E
Sbjct: 226 GKLDALYNPGLSKQE 240


>gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi]
 gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi]
          Length = 148

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 39/70 (55%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D S    + ESD      R SG GGQ VN T++ V + H+PTG+ V+C   R   KN+ 
Sbjct: 26  LDYSRYPSLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGLTVKCHLHRLASKNRI 85

Query: 275 QAWNMLRAKL 284
           +A  +L  KL
Sbjct: 86  EARKILLDKL 95


>gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
 gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
          Length = 264

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 8/78 (10%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+  A   L 
Sbjct: 157 ELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRKIARKRL- 215

Query: 282 AKLYELELQKREEIANIG 299
                  L+K +++AN G
Sbjct: 216 -------LEKLDKLANPG 226


>gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica]
 gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica]
          Length = 154

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ E++ R    R SG GGQ +N   +  +ITHIPTG+VV  Q+ RS  +N+  A  +L 
Sbjct: 27  KVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPTGLVVSSQKTRSLEENRKIARQILA 86

Query: 282 AKLYELELQKREEIANIGESSKTEIG 307
            KL ++        A  G S K  +G
Sbjct: 87  DKLEQM-------FAPPGTSRKDVVG 105


>gi|169837781|ref|ZP_02870969.1| peptide chain release factor 1 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 63

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           R+   +S  R HTS  ++ V P  +++ +IEI+ +D +ID +R+ G GGQ VNTTDSA
Sbjct: 3   RVPSTESQGRVHTSTVTVAVLPEAEET-DIEINPNDLKIDVFRSGGHGGQSVNTTDSA 59


>gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 162

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS+     V        I ES+      + SG GGQ +N T SAV++ H+PT  VV+ Q 
Sbjct: 25  FSTFAALNVKQMPARPTIDESEITGSYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQA 84

Query: 266 ERSQHKNKAQAWNMLRAKL 284
            RS+ +N+  A  +L  K+
Sbjct: 85  TRSRSQNRKIALQILAEKV 103


>gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster]
 gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster]
 gi|157816290|gb|ABV82139.1| AT22563p [Drosophila melanogaster]
          Length = 146

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +G+ R + + P     + +  +S    +PV        + ESD      R SG GGQ VN
Sbjct: 3   RGLVRFLALPPTAVRCKSNLDYSR---FPV--------LQESDIEETFMRGSGPGGQAVN 51

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            T + V + H+PT + V+C   R   KN+ +A  +L  KL
Sbjct: 52  KTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLEKL 91


>gi|213401645|ref|XP_002171595.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
 gi|211999642|gb|EEB05302.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
          Length = 144

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP         + E+D      R  G GGQ +N T    ++ H P+G++V+CQ+ RS+
Sbjct: 22  FVYPAFIQQRFYHLVEADLDETFIRGHGPGGQKINKTSIVCQLRHKPSGLIVRCQETRSR 81

Query: 270 HKNKAQAWNMLRAKL 284
            +N+  A   L  KL
Sbjct: 82  EQNRKIARKRLAEKL 96


>gi|206889859|ref|YP_002249325.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741797|gb|ACI20854.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 114

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 39/68 (57%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++ I ESD      + SG GGQ +N T + V + HIP+ + V+C +ERSQ  N+  A  M
Sbjct: 20  KLGIKESDIEEKFIKCSGHGGQKLNKTSTGVYLKHIPSAIEVKCTKERSQGLNRFFARRM 79

Query: 280 LRAKLYEL 287
           L  K+ E 
Sbjct: 80  LVEKIKEF 87


>gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 491

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E++E D      R SG GGQ  N T + V + H PT + V+CQ  RS  +N+  A   LR
Sbjct: 387 ELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRKIARKRLR 446

Query: 282 AKLYEL 287
           AKL E 
Sbjct: 447 AKLDEF 452


>gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str.
           Silveira]
          Length = 172

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 12/83 (14%)

Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P +D+S   EI+       TY + SG GGQ +N T SAV++ H+PT  VV+ Q  RS+ +
Sbjct: 41  PTIDES---EIT------GTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQ 91

Query: 272 NKAQAWNMLRAKLYELELQKREE 294
           N+  A  +L  K+ EL LQK +E
Sbjct: 92  NRKIALQILAEKV-EL-LQKGDE 112


>gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 136

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 12/83 (14%)

Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P +D+S   EI+       TY + SG GGQ +N T SAV++ H+PT  VV+ Q  RS+ +
Sbjct: 5   PTIDES---EIT------GTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQ 55

Query: 272 NKAQAWNMLRAKLYELELQKREE 294
           N+  A  +L  K+ EL LQK +E
Sbjct: 56  NRKIALQILAEKV-EL-LQKGDE 76


>gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta]
 gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta]
          Length = 148

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L  
Sbjct: 30  LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89

Query: 283 KL 284
           KL
Sbjct: 90  KL 91


>gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis
           Pb01]
 gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis
           Pb01]
          Length = 175

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 232 TY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           TY + SG GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL L+
Sbjct: 52  TYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELHLK 110


>gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans]
 gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans]
          Length = 146

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L  
Sbjct: 30  LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89

Query: 283 KL 284
           KL
Sbjct: 90  KL 91


>gi|302866524|ref|YP_003835161.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315502934|ref|YP_004081821.1| peptide chain release factor h [Micromonospora sp. L5]
 gi|302569383|gb|ADL45585.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315409553|gb|ADU07670.1| peptide chain release factor H [Micromonospora sp. L5]
          Length = 201

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRW---AEKRKFKTEALEIHDGEEAGI-KSATLLIKG 174
           L + AG G  E   WA  L R+ +R    A +R  +TE +E   G+ AG  +S  + I G
Sbjct: 4   LLLSAGRGPAECA-WA--LARLLSRLEGEAARRGLRTERVETVPGDRAGTYRSVLVRITG 60

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A  +  G  G       SPY +   R   + +        D +     E+D      R
Sbjct: 61  AGAEAFAAGWTGTLCWQAPSPYRTGHGRKNWYVT--ARTCRTDVVVTPFHEADVEFVPCR 118

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             G GGQH N   +AVR TH P+G  V    ER  H N+  A  +LR ++
Sbjct: 119 TGGPGGQHRNKASTAVRATHRPSGRTVVVDTERHLHLNRRIAVELLRQRI 168


>gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia]
 gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia]
          Length = 146

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L  
Sbjct: 30  LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89

Query: 283 KL 284
           KL
Sbjct: 90  KL 91


>gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera]
          Length = 178

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R+ S++    Y  V      ++ ESD +    +  G GGQ  N T +A+ + H PTG+VV
Sbjct: 55  RYKSYTRFLDYSRVP-----KLEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPTGLVV 109

Query: 262 QCQQERSQHKNKAQAWNMLRAKL 284
           +C + RS  +N+  A  +L  +L
Sbjct: 110 KCHETRSLDQNRKIARKILLTRL 132


>gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 196

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L A+  EL+L+  +
Sbjct: 48  KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL-AEKVELQLKGEK 106

Query: 294 EIANIGESSK 303
             A I   +K
Sbjct: 107 SRAAIKAETK 116


>gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 184

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L A+  EL+L+  +
Sbjct: 48  KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL-AEKVELQLKGEK 106

Query: 294 EIANIGESSK 303
             A I   +K
Sbjct: 107 SRAAIKAETK 116


>gi|149179343|ref|ZP_01857902.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797]
 gi|148841815|gb|EDL56219.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797]
          Length = 179

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +C+I+  R SG GGQH N  ++ V I HIPT    +  + R Q +N++ A   LR  L
Sbjct: 28  NCQIEQVRRSGPGGQHRNKVETGVVIKHIPTNFTGEASERRQQGRNRSMALFRLRVNL 85


>gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba]
 gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba]
          Length = 146

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 34/62 (54%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L  
Sbjct: 30  LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89

Query: 283 KL 284
           KL
Sbjct: 90  KL 91


>gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
          Length = 196

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL+L+  +
Sbjct: 48  KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLKGEK 106

Query: 294 EIANIGESSK 303
             A I   +K
Sbjct: 107 SRAAIKAETK 116


>gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03]
          Length = 247

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 232 TY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           TY + SG GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL L+
Sbjct: 124 TYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELHLK 182


>gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis
           Pb18]
          Length = 177

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 232 TY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           TY + SG GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL L+
Sbjct: 52  TYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELHLK 110


>gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata]
          Length = 187

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 10/104 (9%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P  D S+E +I E       +  +G GGQ +N  +S V+I H+P+ +VV CQ  RS+ +N
Sbjct: 41  PKFDASMEADIEEKFL----HGGTGPGGQKINKCNSKVQIKHVPSNIVVTCQATRSRDQN 96

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTE-----IGWGRQ 311
           +  A   L  +L   +L + E+  N G    TE     + W RQ
Sbjct: 97  RKIAREKLALELERWQLGQ-EKDGNSGVQVMTEREQALLEWKRQ 139


>gi|154277694|ref|XP_001539684.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150413269|gb|EDN08652.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 187

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL+L+
Sbjct: 48  KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLK 103


>gi|197927088|ref|NP_001102535.2| hypothetical protein LOC498179 [Rattus norvegicus]
 gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus]
          Length = 181

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +     + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +
Sbjct: 49  YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 103

Query: 272 NKAQAWNMLRAKL 284
           N+  A  +L+ K+
Sbjct: 104 NRKMARKILQEKV 116


>gi|168011647|ref|XP_001758514.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690124|gb|EDQ76492.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 282

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 13/54 (24%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           CR++T R+SG GGQH NTT+SA               ++RSQHKN+A+A+  LR
Sbjct: 132 CRVETLRSSGPGGQHRNTTESAA-------------AEDRSQHKNRAKAFKRLR 172


>gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis]
          Length = 168

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           S +   P   D +E +I E       +   G GGQ +N  +S V++ H+PTG+VV CQ  
Sbjct: 32  SKMPPRPKFTDDMERDIEEKFL----HGGRGPGGQKINKCNSKVQLRHVPTGIVVDCQAT 87

Query: 267 RSQHKNKAQAWNMLRAKLYELE 288
           RS+ +N+  A   L  +L + E
Sbjct: 88  RSRDQNRKIAREKLALRLAQWE 109


>gi|332375198|gb|AEE62740.1| unknown [Dendroctonus ponderosae]
          Length = 139

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +P +D        E D      R SG GG  ++TT S V + HIPTG+VV+CQ+ R   
Sbjct: 28  CFPTLD--------ECDLEEQHIRGSGPGGSKISTTCSCVLLKHIPTGLVVKCQETRFLE 79

Query: 271 KNKAQAWNMLRAKL 284
           +N+ +A   L  KL
Sbjct: 80  QNRKRARLNLLTKL 93


>gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus]
          Length = 220

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +     + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +
Sbjct: 88  YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 142

Query: 272 NKAQAWNMLRAKL 284
           N+  A  +L+ K+
Sbjct: 143 NRKMARKILQEKV 155


>gi|149633371|ref|XP_001507092.1| PREDICTED: similar to My030 protein [Ornithorhynchus anatinus]
          Length = 217

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++ES+      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+ +A  +L+ 
Sbjct: 99  LNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKKAREILQE 158

Query: 283 KL 284
           K+
Sbjct: 159 KV 160


>gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
 gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
          Length = 177

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R  G GGQ  N T++ V + H+PTG+VV+C Q RS  +N+  A   +R KL
Sbjct: 77  RGWGPGGQATNKTNNCVLLKHVPTGIVVKCHQTRSLDENRKIARQHMREKL 127


>gi|240280457|gb|EER43961.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 186

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL+L+
Sbjct: 48  KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLK 103


>gi|126324306|ref|XP_001375022.1| PREDICTED: similar to RIKEN cDNA 2810006K23 gene [Monodelphis
           domestica]
          Length = 212

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 37/64 (57%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + ++E D      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L
Sbjct: 92  LPLNERDLEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLAREIL 151

Query: 281 RAKL 284
           + K+
Sbjct: 152 QGKV 155


>gi|221101663|ref|XP_002163246.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 159

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD +    + SG GGQ +N T + V + H  TG++V+CQ+ RS  +N+  A   L  
Sbjct: 56  LKESDFQEKFIKGSGPGGQKINKTSNCVELKHDATGIIVKCQETRSLERNRVIARERLLE 115

Query: 283 KL 284
           KL
Sbjct: 116 KL 117


>gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni]
 gi|238664498|emb|CAZ35331.1| conserved hypothetical protein [Schistosoma mansoni]
          Length = 155

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +SP+  + R H+   + W++       E ++SE          SG GGQ +N T + V +
Sbjct: 13  LSPHHFSLRFHSK--NQWLFN------ECDLSEM-----AVLGSGPGGQSINKTANCVVL 59

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            HIPTG+VV+CQ  R   +N+  A   L  KL
Sbjct: 60  KHIPTGIVVKCQDSRELERNRILARQRLNDKL 91


>gi|254582148|ref|XP_002497059.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
 gi|238939951|emb|CAR28126.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
          Length = 155

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 225 ESDCRID-TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ES C     +   G GGQ +N  +S V++ H+PTG+VV+CQQ RS+ +N+  A   L
Sbjct: 31  ESQCEEKFLHGGRGPGGQKINKCNSKVQLKHLPTGIVVECQQTRSRDQNRKIAREKL 87


>gi|45201377|ref|NP_986947.1| AGR281Cp [Ashbya gossypii ATCC 10895]
 gi|44986311|gb|AAS54771.1| AGR281Cp [Ashbya gossypii ATCC 10895]
          Length = 176

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 13/78 (16%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ +N  +S V++ H+P+G+V++CQ  RS+ +N+  A   L A L +          
Sbjct: 63  GPGGQKINKCNSKVQLRHVPSGIVIECQATRSREQNRKLAREKLAAALAQ---------- 112

Query: 297 NIGESSKTEIG---WGRQ 311
             G +S+ E+    W RQ
Sbjct: 113 PPGSASERELALRTWARQ 130


>gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
 gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
          Length = 181

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D S   ++ ES+      R SG GGQ VN T + V + H+PT + ++C   R   KN+ 
Sbjct: 61  LDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRV 120

Query: 275 QAWNMLRAKL 284
           +A  +L  KL
Sbjct: 121 EARKLLLDKL 130


>gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis]
 gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis]
          Length = 181

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D S   ++ ES+      R SG GGQ VN T + V + H+PT + ++C   R   KN+ 
Sbjct: 61  LDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRV 120

Query: 275 QAWNMLRAKL 284
           +A  +L  KL
Sbjct: 121 EARKLLLDKL 130


>gi|298713472|emb|CBJ27027.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 191

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + SG GGQ +N   + V++TH+P+GV V CQ  R  H N+  A   L+ K+
Sbjct: 48  KGSGPGGQKINKVRNCVQLTHVPSGVSVSCQDSRELHANRHIARKRLKEKV 98


>gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae]
 gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae]
          Length = 141

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 37/70 (52%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D S    + ESD      R SG GGQ VN T + V + H+PT + ++C   R   KN+ 
Sbjct: 24  LDYSRYPTLQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRV 83

Query: 275 QAWNMLRAKL 284
           +A  +L  KL
Sbjct: 84  EARKLLLEKL 93


>gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
 gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
          Length = 713

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + + E D      R SG GGQ +N   + V++TH+PTG  V CQ+ RS+ +N+  A
Sbjct: 598 LTLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRDRNRELA 653


>gi|116328132|ref|YP_797852.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331415|ref|YP_801133.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120876|gb|ABJ78919.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125104|gb|ABJ76375.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 154

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +E+ E++      R+ G GGQ+VN   +AV + H PTG+ V+C   R+Q  N+ +A  +L
Sbjct: 22  LEVKENELEESFTRSGGKGGQNVNKVSTAVHLKHKPTGIEVKCSLYRTQGLNRYKARAIL 81

Query: 281 RAKLYE 286
             K+ E
Sbjct: 82  CEKIQE 87


>gi|255718823|ref|XP_002555692.1| KLTH0G15158p [Lachancea thermotolerans]
 gi|238937076|emb|CAR25255.1| KLTH0G15158p [Lachancea thermotolerans]
          Length = 155

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P +   +E E+ E       +   G GGQ +N  +S V++ H+P+G+VV+CQ+ RS+ +N
Sbjct: 26  PKLSTQMETELEEKF----LHGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRDQN 81

Query: 273 KAQAWNML 280
           +  A   L
Sbjct: 82  RKLAREKL 89


>gi|56784339|dbj|BAD82360.1| unknown protein [Oryza sativa Japonica Group]
 gi|56785244|dbj|BAD82132.1| unknown protein [Oryza sativa Japonica Group]
          Length = 137

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 26/35 (74%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           C + T++ASG GGQH N  +SAVR+ H PTG++ Q
Sbjct: 86  CEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQ 120


>gi|297621679|ref|YP_003709816.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
           86-1044]
 gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
           86-1044]
          Length = 139

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            SG GGQ VN T S V + H P+G+ ++CQ ERS+  N+  A  +L  K+ E
Sbjct: 32  GSGKGGQKVNKTASCVYLKHEPSGIEIKCQLERSRELNRFYARRLLCEKIEE 83


>gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus]
          Length = 142

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q 
Sbjct: 42  STVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQT 101

Query: 267 RSQHKNKAQAWNMLRAKL 284
           RS  +N+  A  +L+ K+
Sbjct: 102 RSVDQNRKIARKVLQEKV 119


>gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog,
           mitochondrial isoform a [Mus musculus]
 gi|81895172|sp|Q80VP5|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65
           homolog, mitochondrial; Flags: Precursor
 gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus]
 gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus]
          Length = 184

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +     + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +
Sbjct: 52  YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 106

Query: 272 NKAQAWNMLRAKL 284
           N+  A  +L+ K+
Sbjct: 107 NRKIARKVLQEKV 119


>gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like isoform 1 [Acyrthosiphon pisum]
 gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like [Acyrthosiphon pisum]
 gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 150

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVY---PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           L +  P+++NS ++    S+ ++     +D S    I+E++      + SG GG  VN  
Sbjct: 5   LCKALPFNTNSVKNARSISLTLFNKKQTIDRSKVPIINENELEEMFVKGSGPGGSAVNKN 64

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            + V + H PTG+V++C + R    N+  A   L  KL  +E
Sbjct: 65  ANCVVLKHKPTGIVIKCHESRCVEDNRKMAREKLAIKLDVIE 106


>gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus]
          Length = 152

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +     + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +
Sbjct: 52  YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 106

Query: 272 NKAQAWNMLRAKL 284
           N+  A  +L+ K+
Sbjct: 107 NRKIARKVLQEKV 119


>gi|121730460|ref|ZP_01682775.1| conserved domain protein [Vibrio cholerae V52]
 gi|121627803|gb|EAX60412.1| conserved domain protein [Vibrio cholerae V52]
          Length = 156

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123
           ++L+  E   +EDD  + +   D ++  K  +E    E  +L    D ND    +LE+ A
Sbjct: 60  EDLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           GAGG E+  +A  L RMY+R+AEK+ ++ E +
Sbjct: 120 GAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVM 151


>gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 165

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 37/63 (58%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            + E++ R    +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+
Sbjct: 54  PLDENELREQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKLARRILQ 113

Query: 282 AKL 284
            K+
Sbjct: 114 EKV 116


>gi|6323311|ref|NP_013383.1| hypothetical protein YLR281C [Saccharomyces cerevisiae S288c]
 gi|74676369|sp|Q05863|YL281_YEAST RecName: Full=Uncharacterized peptide chain release factor-like
           protein YLR281C, mitochondrial; Flags: Precursor
 gi|596041|gb|AAB67327.1| Ylr281cp [Saccharomyces cerevisiae]
 gi|45269753|gb|AAS56257.1| YLR281C [Saccharomyces cerevisiae]
 gi|151940986|gb|EDN59367.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190405338|gb|EDV08605.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
 gi|256269833|gb|EEU05093.1| YLR281C-like protein [Saccharomyces cerevisiae JAY291]
 gi|259148263|emb|CAY81510.1| EC1118_1L7_1343p [Saccharomyces cerevisiae EC1118]
 gi|285813696|tpg|DAA09592.1| TPA: hypothetical protein YLR281C [Saccharomyces cerevisiae S288c]
          Length = 155

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           G GGQ +N  +S V++ H PTG+VV+CQ+ RS+ +N+  A
Sbjct: 47  GPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLA 86


>gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 294

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 36/66 (54%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ  RS   N+  A   L 
Sbjct: 185 ELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDTRSLSLNRKLARRWLL 244

Query: 282 AKLYEL 287
            KL +L
Sbjct: 245 EKLDKL 250


>gi|24214865|ref|NP_712346.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24195884|gb|AAN49364.1| peptidyl-tRNA hydrolase involved in peptide chain release
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 155

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I E++      R+ G GGQ+VN   +AV + H PTG+ V+C   R+Q  N+ +A  +L
Sbjct: 22  LQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKARAIL 81

Query: 281 RAKLYEL 287
             K+ + 
Sbjct: 82  CEKIRDF 88


>gi|313004791|emb|CAE17950.2| C. elegans protein T23B5.4a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 133

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 10/103 (9%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ + DC        G GGQ VNT  +AV++TH+PTG V++  + R   KN   A+  ++
Sbjct: 26  DVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMK 85

Query: 282 AKL---------YELELQKREEIANIGESSKTEIGWGRQIRSY 315
             L         YE +L KR +IA   +S+K  +   ++  SY
Sbjct: 86  FVLDRQINGENCYEEQL-KRLQIAKEEKSNKRRVQARKEKESY 127


>gi|302800437|ref|XP_002981976.1| hypothetical protein SELMODRAFT_421349 [Selaginella moellendorffii]
 gi|300150418|gb|EFJ17069.1| hypothetical protein SELMODRAFT_421349 [Selaginella moellendorffii]
          Length = 208

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)

Query: 196 YDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           ++S   R  SF+ + V P++++S IE+E+ + D  I T R+ G GGQ+V   ++AVR++
Sbjct: 145 FNSKGLRQMSFAGVEVMPLLEESEIEVELPDGDLEITTRRSGGKGGQNVKKVETAVRVS 203


>gi|296213216|ref|XP_002753183.1| PREDICTED: uncharacterized protein C12orf65-like [Callithrix
           jacchus]
          Length = 170

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 66  KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKV 116


>gi|213423387|ref|ZP_03356375.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 62

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+   +S  
Sbjct: 1   YSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQG 60

Query: 201 R 201
           R
Sbjct: 61  R 61


>gi|296814610|ref|XP_002847642.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
           CBS 113480]
 gi|238840667|gb|EEQ30329.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
           CBS 113480]
          Length = 247

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 56/142 (39%), Gaps = 45/142 (31%)

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A G  K   G  R  R SP         +   +   P +DDS   EIS S       + S
Sbjct: 46  AQGRFKQHVGDVRFFRTSP-------PAAVKQMPPRPTIDDS---EISGS-----YLKGS 90

Query: 237 GAGGQHVN------------------------------TTDSAVRITHIPTGVVVQCQQE 266
           G GGQ +N                               T+SAV++ HIPT  VV+CQ  
Sbjct: 91  GPGGQKINEYFNKKKYPILYSKLIIHEHPYSAEDKCQNKTNSAVQLIHIPTNTVVKCQAT 150

Query: 267 RSQHKNKAQAWNMLRAKLYELE 288
           RSQ +N+  A  +L  K+  LE
Sbjct: 151 RSQSQNRKIAKQILAEKVELLE 172


>gi|45657623|ref|YP_001709.1| peptide chain release factor 2-like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45600863|gb|AAS70346.1| peptide chain release factor 2-like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 155

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I E++      R+ G GGQ+VN   +AV + H PTG+ V+C   R+Q  N+ +A  +L
Sbjct: 22  LQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKARAIL 81

Query: 281 RAKLYEL 287
             K+ + 
Sbjct: 82  CEKIQDF 88


>gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
 gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
          Length = 120

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           I E D      R SG GGQ VN T++ V + H PTG+ V+C  +RS+  N+
Sbjct: 19  IREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNR 69


>gi|68061541|ref|XP_672770.1| peptide release factor [Plasmodium berghei strain ANKA]
 gi|56490109|emb|CAI01539.1| peptide release factor, putative [Plasmodium berghei]
          Length = 210

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GI-KSATL 170
           DSN+  LE+  G GG E++ +AN L  MY  + + + ++         EE  GI K+   
Sbjct: 86  DSNEVRLEIVPGVGGQEAKMFANELFSMYEHFCKLKNYECLIKNNKLCEEGKGIYKNIVA 145

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
            IKG   Y     E G+HR+ RI P +S  +  TS S + ++
Sbjct: 146 YIKGEGVYVDFIQEIGIHRVQRI-PINS-KKMQTSTSIVLLF 185


>gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 5 [Pan troglodytes]
 gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 1 [Pan troglodytes]
 gi|114647629|ref|XP_001169362.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 3 [Pan troglodytes]
 gi|114647633|ref|XP_001169404.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
 gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Pan troglodytes]
 gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Pan troglodytes]
          Length = 166

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +     + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +
Sbjct: 49  YPAL-----LSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQ 103

Query: 272 NKAQAWNMLRAKL 284
           N+  A  +L+ K+
Sbjct: 104 NRKLARKILQEKV 116


>gi|297693336|ref|XP_002823974.1| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Pongo
           abelii]
 gi|297693338|ref|XP_002823975.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Pongo
           abelii]
 gi|297693340|ref|XP_002823976.1| PREDICTED: uncharacterized protein C12orf65-like isoform 3 [Pongo
           abelii]
 gi|297693342|ref|XP_002823977.1| PREDICTED: uncharacterized protein C12orf65-like isoform 4 [Pongo
           abelii]
 gi|297693344|ref|XP_002823978.1| PREDICTED: uncharacterized protein C12orf65-like isoform 5 [Pongo
           abelii]
          Length = 166

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 66  KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKV 116


>gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|74733574|sp|Q9H3J6|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65,
           mitochondrial; Flags: Precursor
 gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens]
 gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens]
 gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens]
 gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens]
 gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens]
 gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct]
          Length = 166

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 66  KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKV 116


>gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 1 [Nomascus leucogenys]
 gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 2 [Nomascus leucogenys]
 gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 3 [Nomascus leucogenys]
 gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 4 [Nomascus leucogenys]
          Length = 166

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +     + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +
Sbjct: 49  YPAL-----LSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQ 103

Query: 272 NKAQAWNMLRAKL 284
           N+  A  +L+ K+
Sbjct: 104 NRKLARKILQEKV 116


>gi|54293184|ref|YP_125599.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
 gi|53753016|emb|CAH14459.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
          Length = 136

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D       +SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILSSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKL 284
             KL
Sbjct: 77  CEKL 80


>gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
 gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
          Length = 248

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + I++ E D R    R SG GGQ +N   + V + HIPT   + CQ  RS+ +N+  A  
Sbjct: 126 MPIDLDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTSTRITCQLTRSRAQNRELARR 185

Query: 279 MLRAKL 284
            L  +L
Sbjct: 186 QLSQRL 191


>gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum]
          Length = 163

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 30/51 (58%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R  G GGQ +NTT + V + H PTG++V+CQ  R   KN+  A   L  KL
Sbjct: 51  RGWGPGGQSINTTANCVVLKHEPTGIMVKCQDSRELEKNRELARRRLNDKL 101


>gi|61886963|ref|XP_584238.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos
           taurus]
 gi|297484729|ref|XP_002694521.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos
           taurus]
 gi|296478551|gb|DAA20666.1| chromosome 12 open reading frame 65 ortholog [Bos taurus]
          Length = 172

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 66  KGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQEKV 116


>gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 136

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKL 284
             KL
Sbjct: 77  CEKL 80


>gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Sus scrofa]
          Length = 202

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 66  KGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRKLARRILQEKV 116


>gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
 gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
          Length = 136

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKL 284
             KL
Sbjct: 77  CEKL 80


>gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby]
 gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby]
 gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 136

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKL 284
             KL
Sbjct: 77  CEKL 80


>gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus]
          Length = 143

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 66  KGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQEKV 116


>gi|268537314|ref|XP_002633793.1| Hypothetical protein CBG03485 [Caenorhabditis briggsae]
 gi|187036700|emb|CAP24377.1| hypothetical protein CBG_03485 [Caenorhabditis briggsae AF16]
          Length = 137

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ + DC        G GGQ VNT  +AV++TH PTG VV+  + R   KN   A+  ++
Sbjct: 26  EVKKDDCEQKYISGWGPGGQKVNTAQNAVQLTHRPTGTVVKVHESRLLPKNIEIAFERMK 85

Query: 282 AKL 284
             L
Sbjct: 86  VVL 88


>gi|73995153|ref|XP_543374.2| PREDICTED: similar to CG30100-PA [Canis familiaris]
          Length = 440

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ES+      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 329 LDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARQILQE 388

Query: 283 KL 284
           K+
Sbjct: 389 KV 390


>gi|108763642|ref|YP_629741.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
 gi|108467522|gb|ABF92707.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
          Length = 966

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 11/171 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR + L  +T+ P+LW +   A  ++R  + ++  ++ ++ ++      L    L  E  
Sbjct: 664 QRRAELLAETQAPNLWDDPTRAAEVIRAFRTVEAQLNELERLE---AAGLFARRLVREAK 720

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWANMLL 138
           +   L   +  ++ +  EV+    E+L +  A + D  A +++ A         W   L 
Sbjct: 721 NEVQLGSAARQVEDVAREVQMA--EALHASGATTQDTEALVDICASDSVEAQATWVQELA 778

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
            MY  WA++R ++  A+   +          + I GP AYG+L GE G+HR
Sbjct: 779 TMYLGWAQRRGYEAVAVAEAEEP----SRVVVRIAGPGAYGFLAGEAGMHR 825


>gi|281358821|ref|ZP_06245294.1| Class I peptide chain release factor [Victivallis vadensis ATCC
           BAA-548]
 gi|281314710|gb|EFA98750.1| Class I peptide chain release factor [Victivallis vadensis ATCC
           BAA-548]
          Length = 160

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 216 DDSIEIEIS--ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           DD ++++ S   + C ++ ++ SG GGQ  N T SAVR+      +      ERSQH+N+
Sbjct: 5   DDFLKLDDSALSACCELEFFKGSGNGGQKRNKTSSAVRVHLKAFDLSASDCTERSQHRNR 64

Query: 274 AQAWNMLRAKLYELELQKREEIANIGE 300
           A A   LR   + L L  RE  A   E
Sbjct: 65  ANALAKLR---HSLALTVRETPAEPPE 88


>gi|194214381|ref|XP_001492966.2| PREDICTED: similar to My030 protein [Equus caballus]
          Length = 166

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 66  KGHGPGGQATNKTSNCVVLKHMPSGIVVKCHQTRSVDQNRKLARKILQEKV 116


>gi|71994442|ref|NP_001023399.1| hypothetical protein T23B5.4 [Caenorhabditis elegans]
          Length = 125

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL---------YEL 287
           G GGQ VNT  +AV++TH+PTG V++  + R   KN   A+  ++  L         YE 
Sbjct: 33  GPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDRQINGENCYEE 92

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSY 315
           +L KR +IA   +S+K  +   ++  SY
Sbjct: 93  QL-KRLQIAKEEKSNKRRVQARKEKESY 119


>gi|162312297|ref|NP_596474.2| peptide release factor [Schizosaccharomyces pombe 972h-]
 gi|212288570|sp|Q9Y811|YONI_SCHPO RecName: Full=Uncharacterized peptide chain release factor-like
           protein C1105.18c, mitochondrial; Flags: Precursor
 gi|157310457|emb|CAB50981.2| peptide release factor [Schizosaccharomyces pombe]
          Length = 162

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
             G GGQ +N T    ++ HIPTG++V+ Q  RS+ +N+  A   L  K+ E +
Sbjct: 59  GKGPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQNRCIARKRLTEKVDEFK 112


>gi|313004792|emb|CBY25203.1| C. elegans protein T23B5.4b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 149

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL---------YEL 287
           G GGQ VNT  +AV++TH+PTG V++  + R   KN   A+  ++  L         YE 
Sbjct: 57  GPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDRQINGENCYEE 116

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSY 315
           +L KR +IA   +S+K  +   ++  SY
Sbjct: 117 QL-KRLQIAKEEKSNKRRVQARKEKESY 143


>gi|311992638|ref|YP_004009506.1| hypothetical protein Ac42p144 [Acinetobacter phage Ac42]
 gi|298684421|gb|ADI96382.1| hypothetical protein Ac42p144 [Acinetobacter phage Ac42]
          Length = 64

 Score = 45.8 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   D  I+++R   + G ++N     VRITH P+G V +  ++RS H N+A A+ +LR 
Sbjct: 2   IKAEDLLIESFRTE-SQGHYLNAYPKGVRITHKPSGKVFESSEQRSPHLNRAVAFKLLRD 60

Query: 283 KLYE 286
           +  E
Sbjct: 61  EFPE 64


>gi|221133060|ref|XP_002169670.1| PREDICTED: similar to peptide chain release factor, putative,
           partial [Hydra magnipapillata]
          Length = 171

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  +A LEV AG GG E+  +A +L RMY R+A  + ++ E + + D     IK A+  I
Sbjct: 108 DERNAILEVRAGTGGEEAGLFAAVLFRMYQRYAANKGWRFEIIAMSDTGLGAIKEASASI 167

Query: 173 KG 174
            G
Sbjct: 168 SG 169


>gi|295798158|emb|CAX69014.1| peptide chain release factor class A (=1), fragment [uncultured
           bacterium]
          Length = 170

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 15/130 (11%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++ I E D      R+ G GGQ++N   + V + H  +G+ ++CQ +R+Q  N+  A  +
Sbjct: 50  QLGIREPDLEERFVRSRGPGGQNINKVSTCVYLKHRTSGIEIKCQSQRTQSANRIAARAL 109

Query: 280 LRAKLYELELQKREEIANIGESSKTE---IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L +K+        +E A + +  K +   I   R+ R+   +     K +R N E+ S  
Sbjct: 110 LVSKIE-------QEAAALSQRQKKQRFLIERARRTRTISAK-----KKVRENKERKSQK 157

Query: 337 DVLDGDLDDF 346
             L   L  +
Sbjct: 158 KSLRRRLSGY 167


>gi|301631267|ref|XP_002944721.1| PREDICTED: uncharacterized 15.2 kDa protein in pcaJ 3'region-like
           [Xenopus (Silurana) tropicalis]
          Length = 140

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 32/142 (22%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTGV--------- 259
           +  +  +++ E + +I   RA GAGGQ+VN   SAV +      + +P  V         
Sbjct: 1   MGSAFPLQVPEHEVQITAMRAQGAGGQNVNKVSSAVHLRFDITASSLPLPVQQRLLALRD 60

Query: 260 ---------VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWG 309
                    +++ QQ RSQ  N+A AW  L A +  + +  R   A     +S+     G
Sbjct: 61  GRITQDGVLIIKAQQHRSQELNRADAWARLLALVNSVAVPPRARRATRPTLASQQRRREG 120

Query: 310 RQIRSYVLQPYQMVKDLRTNIE 331
           +++RS        VK LR  +E
Sbjct: 121 KRLRSA-------VKALRGRVE 135


>gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila]
 gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 636

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 33/72 (45%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P   + I+ +I E D      + SG GGQ VN T +   + H PTG+ V+    R   KN
Sbjct: 512 PQKKERIKPQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPTGIQVRSHASRELDKN 571

Query: 273 KAQAWNMLRAKL 284
           K      L  KL
Sbjct: 572 KQYCMKQLSEKL 583


>gi|308481019|ref|XP_003102715.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
 gi|308260801|gb|EFP04754.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
          Length = 162

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           E+ + DC        G GGQ VNT  +AV++TH+PTG V++
Sbjct: 26  EVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLK 66


>gi|296423832|ref|XP_002841456.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637696|emb|CAZ85647.1| unnamed protein product [Tuber melanosporum]
          Length = 237

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           VN T SAV++ H+PTG+VV+ Q  RS+ +N+  A  +L  KL  +E      +  + E
Sbjct: 91  VNKTSSAVQLKHLPTGIVVKSQATRSRSQNRKIARKILAEKLEFMERGTESRVGALAE 148


>gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14]
          Length = 152

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           + SG GGQ +N   + V + H PTG+ V+CQ+ R    N+  A  +L  KL +L
Sbjct: 47  KGSGKGGQKINKVRNCVLLKHSPTGIQVRCQKTRCLDDNRRIARKLLTEKLDDL 100


>gi|237837039|ref|XP_002367817.1| peptidyl-tRNA hydrolase domain-containing protein [Toxoplasma
           gondii ME49]
 gi|211965481|gb|EEB00677.1| peptidyl-tRNA hydrolase domain-containing protein [Toxoplasma
           gondii ME49]
          Length = 330

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 29/46 (63%)

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           Q VN T+S V I H+  G+V++CQ  RSQ KN+  A  +L  KL E
Sbjct: 217 QKVNKTNSCVVIVHLTRGLVIRCQHSRSQRKNRIMARELLLKKLQE 262


>gi|170575451|ref|XP_001893249.1| hypothetical protein Bm1_08890 [Brugia malayi]
 gi|158600871|gb|EDP37928.1| hypothetical protein Bm1_08890 [Brugia malayi]
          Length = 116

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 22/31 (70%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           G GGQ VN T +AV I H+PTGVVV+  Q R
Sbjct: 13  GPGGQKVNMTKNAVTIKHVPTGVVVRVHQSR 43


>gi|33322102|gb|AAQ06771.1|AF496112_1 peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 64

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ R
Sbjct: 4   FAGDLLRMYEKYAENQGWKVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHRVQR 63

Query: 193 I 193
           I
Sbjct: 64  I 64


>gi|254498257|ref|ZP_05110999.1| peptide chain release factor [Legionella drancourtii LLAP12]
 gi|254352506|gb|EET11299.1| peptide chain release factor [Legionella drancourtii LLAP12]
          Length = 135

 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 27/39 (69%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            SG GGQ ++ T S V + H+P+G+ ++CQ+ RS+  N+
Sbjct: 31  GSGKGGQKLHKTASTVYLKHVPSGIEIKCQESRSREGNR 69


>gi|254568480|ref|XP_002491350.1| hypothetical protein [Pichia pastoris GS115]
 gi|238031147|emb|CAY69070.1| Hypothetical protein PAS_chr2-1_0443 [Pichia pastoris GS115]
          Length = 168

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +N T+S V++THI TG+VV  Q  RS+ +N+  A  +L  KL +LE
Sbjct: 49  INKTNSKVQLTHIATGIVVTSQATRSREQNRKIAREILALKLQDLE 94


>gi|328352136|emb|CCA38535.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435]
          Length = 147

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +N T+S V++THI TG+VV  Q  RS+ +N+  A  +L  KL +LE
Sbjct: 28  INKTNSKVQLTHIATGIVVTSQATRSREQNRKIAREILALKLQDLE 73


>gi|312084786|ref|XP_003144416.1| hypothetical protein LOAG_08838 [Loa loa]
 gi|307760418|gb|EFO19652.1| hypothetical protein LOAG_08838 [Loa loa]
          Length = 140

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           G GGQ VN T +AV I H+PTG+VV+  Q R   +N
Sbjct: 36  GPGGQKVNMTRNAVTIKHVPTGIVVRVHQSRLLQEN 71


>gi|156343066|ref|XP_001621028.1| hypothetical protein NEMVEDRAFT_v1g7994 [Nematostella vectensis]
 gi|156206594|gb|EDO28928.1| predicted protein [Nematostella vectensis]
          Length = 87

 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +++ E D      +  G GGQ VN T++ V + H+PTG+   C Q RS  +N++ A  +L
Sbjct: 5   VKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIARELL 61

Query: 281 RAKLYEL 287
             +L +L
Sbjct: 62  LNQLDQL 68


>gi|149198864|ref|ZP_01875906.1| peptidyl-tRNA hydrolase domain protein [Lentisphaera araneosa
           HTCC2155]
 gi|149138062|gb|EDM26473.1| peptidyl-tRNA hydrolase domain protein [Lentisphaera araneosa
           HTCC2155]
          Length = 157

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 26/46 (56%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           C  D ++ASG GGQ  N T SAVR+ H  T +     ++R Q  NK
Sbjct: 18  CTQDFFKASGPGGQKKNKTSSAVRLIHKETDIQASASEDRQQSVNK 63


>gi|297183730|gb|ADI19854.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_46D07]
          Length = 90

 Score = 43.5 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           DS +A LEV AG GG E+  +A+ L  MY R+A K  +K E +E+    E GI
Sbjct: 38  DSRNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWKFEVMEV---SETGI 87


>gi|308185762|ref|YP_003929893.1| hypothetical protein Pvag_0224 [Pantoea vagans C9-1]
 gi|308056272|gb|ADO08444.1| Uncharacterized protein yaeJ [Pantoea vagans C9-1]
          Length = 136

 Score = 43.5 bits (101), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 24/84 (28%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           +EI ES+  +   RA GAGGQHVN   +A+ +                      H+ TG 
Sbjct: 8   VEIPESEIELTAIRAQGAGGQHVNKASTAIHLRFDIAASSLPAFYKERLLTASHHLITGE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNML 280
             VV++ Q+ RSQ  N+  A   L
Sbjct: 68  GVVVIKAQEYRSQEMNREAALQRL 91


>gi|270159507|ref|ZP_06188163.1| putative peptide chain release factor [Legionella longbeachae
           D-4968]
 gi|289165692|ref|YP_003455830.1| unknown proteins [Legionella longbeachae NSW150]
 gi|269987846|gb|EEZ94101.1| putative peptide chain release factor [Legionella longbeachae
           D-4968]
 gi|288858865|emb|CBJ12787.1| putative unknown proteins [Legionella longbeachae NSW150]
          Length = 134

 Score = 43.5 bits (101), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +++ I+E+D        SG GGQ ++ T S V + H P+G+ ++CQ+ RS+  N+  A  
Sbjct: 15  MKLSINEADLIEKFILGSGKGGQKLHKTASTVYLKHEPSGLEIKCQESRSREDNRYFARV 74

Query: 279 MLRAKL 284
            L  KL
Sbjct: 75  RLCEKL 80


>gi|156374287|ref|XP_001629739.1| predicted protein [Nematostella vectensis]
 gi|156216746|gb|EDO37676.1| predicted protein [Nematostella vectensis]
          Length = 95

 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +++ E D      +  G GGQ VN T++ V + H+PTG+   C Q RS  +N++ A  +L
Sbjct: 5   VKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIARELL 61

Query: 281 RAKLYEL 287
             +L +L
Sbjct: 62  LNQLDQL 68


>gi|304396667|ref|ZP_07378548.1| Class I peptide chain release factor [Pantoea sp. aB]
 gi|304356176|gb|EFM20542.1| Class I peptide chain release factor [Pantoea sp. aB]
          Length = 136

 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 24/84 (28%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           +EI ES+  +   RA GAGGQHVN   +A+ +                      H+ TG 
Sbjct: 8   VEIPESEIELTAIRAQGAGGQHVNKASTAIHLRFDIAASSLPAFYKERLLTASHHLITGD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNML 280
             VV++ Q+ RSQ  N+  A   L
Sbjct: 68  GVVVIKAQEYRSQEMNREAALQRL 91


>gi|221505032|gb|EEE30686.1| peptidyl-tRNA hydrolase domain-containing protein, putative
           [Toxoplasma gondii VEG]
          Length = 330

 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 29/46 (63%)

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           Q VN T++ V I H+  G+V++CQ  RSQ KN+  A  +L  KL E
Sbjct: 217 QKVNKTNNCVVIVHLTRGLVIRCQHSRSQRKNRIMARELLLKKLQE 262


>gi|213026528|ref|ZP_03340975.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 54

 Score = 43.1 bits (100), Expect = 0.065,   Method: Composition-based stats.
 Identities = 19/39 (48%), Positives = 28/39 (71%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++
Sbjct: 15  DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWR 53


>gi|255024491|ref|ZP_05296477.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 165

 Score = 43.1 bits (100), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 12/160 (7%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           ++D   AV+ R   LN    DP +  +    + L +E+  +   +   +E   + +++ +
Sbjct: 1   MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125
              LL   L+++   + +E    LQ+ K ++E +    LL    D ND     LE+   A
Sbjct: 61  TKELLGEKLDDEMREMAKEELAELQKEKADLEERL--KLLLVPKDPNDDKNVILEIRGAA 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           GG E+  +A  L RMY+++AE R +K   +EI D    GI
Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWK---VEIMDANPTGI 155


>gi|328852030|gb|EGG01179.1| hypothetical protein MELLADRAFT_92698 [Melampsora larici-populina
           98AG31]
          Length = 177

 Score = 42.7 bits (99), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 18/81 (22%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTT---------DS---------AVRITHIPTGVVVQC 263
           +++ESD   +  R SG GGQ +N+          DS         +V + H PTG+ VQC
Sbjct: 37  KLNESDLIEEFVRGSGPGGQCINSLSFSQNMLMDDSCILKKTNFISVSLIHKPTGIRVQC 96

Query: 264 QQERSQHKNKAQAWNMLRAKL 284
             +RS+  N+ +A  +L  K+
Sbjct: 97  HAQRSRESNRKEARKILSEKV 117


>gi|70934187|ref|XP_738357.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56514509|emb|CAH83815.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 194

 Score = 42.7 bits (99), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           + +G GGQ VN T++ V I +  T    +V++C + R   +N+  A  +L  K+  +  +
Sbjct: 84  KGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYEKITSINNK 143

Query: 291 KREEIANIGESSKTEI 306
            +E+I N  E  K +I
Sbjct: 144 AKEDIINQIEKEKRQI 159


>gi|88607060|ref|YP_505064.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598123|gb|ABD43593.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 72

 Score = 42.7 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 25/37 (67%)

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y + PY+MVKDLRT  E  +   V++GDLD F+ A L
Sbjct: 23  YKMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAAL 59


>gi|68171148|ref|ZP_00544556.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999418|gb|EAM86059.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 39

 Score = 42.7 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + PYQMVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 1   MHPYQMVKDIRTGHEVGNINSVLDGNLDSFIISALTTK 38


>gi|154290812|ref|XP_001545996.1| hypothetical protein BC1G_15445 [Botryotinia fuckeliana B05.10]
 gi|150847396|gb|EDN22589.1| hypothetical protein BC1G_15445 [Botryotinia fuckeliana B05.10]
          Length = 168

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           +++ HIPTG+V++ Q  RS+ +N+  A  ML  +L  LE  K   +A +GE+ K
Sbjct: 44  IQLKHIPTGMVLKVQATRSRTQNRKIARQMLAERLELLEKGKESRVAIVGETKK 97


>gi|223936544|ref|ZP_03628455.1| Class I peptide chain release factor [bacterium Ellin514]
 gi|223894708|gb|EEF61158.1| Class I peptide chain release factor [bacterium Ellin514]
          Length = 120

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 25/40 (62%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           R+SG GGQ+VN   + V + H+PT V V  Q  RSQ  N+
Sbjct: 18  RSSGPGGQNVNKVATRVTLRHLPTNVTVSVQDSRSQFMNR 57


>gi|194697006|gb|ACF82587.1| unknown [Zea mays]
          Length = 95

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328
           NKA+A  +LRA+LYELE  +R    +  +    +IG G    +IR+Y   P   V D R 
Sbjct: 2   NKAKALKVLRARLYELE--RRRLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRV 58

Query: 329 NIEKTSPSDVLDGD-LDDFMKATL 351
            +   S +DV++G+ LD F+ A L
Sbjct: 59  GVTHHSIADVMEGESLDMFVDALL 82


>gi|169837782|ref|ZP_02870970.1| peptide chain release factor 1 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 62

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +E+ AGAGG E+  +A+ L RMY R+ E   FKTE L  H      IK
Sbjct: 1   MEIRAGAGGDEASLFASELYRMYLRYCEIHNFKTELLVNHQMMLVAIK 48


>gi|289678407|ref|ZP_06499297.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 145

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 10/76 (13%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132
           E+A+EE     ++ET   L  ++LE + ++   LL  +  D  + +LE+ AG GG E+  
Sbjct: 78  EMAVEE-----VRETRQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKR 148
           ++  L RMY+R+AE+R
Sbjct: 129 FSGDLFRMYSRYAERR 144


>gi|302654387|ref|XP_003019001.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI
           0517]
 gi|291182691|gb|EFE38356.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI
           0517]
          Length = 212

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIAN 297
           +    SAV++ HIPT  VV+CQ  RSQ +N+  A  +L  K+  LE   Q R  I N
Sbjct: 90  IGMISSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAEKIELLEKGEQSRAAIVN 146


>gi|225560984|gb|EEH09265.1| hypothetical protein HCBG_02802 [Ajellomyces capsulatus G186AR]
          Length = 385

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           G   Q +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL+L+
Sbjct: 64  GKSRQSINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLK 116


>gi|68067771|ref|XP_675820.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|68077037|ref|XP_680438.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56495222|emb|CAI02598.1| conserved hypothetical protein [Plasmodium berghei]
 gi|56501376|emb|CAI04754.1| hypothetical protein PB001267.02.0 [Plasmodium berghei]
          Length = 147

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           + +G GGQ VN T++ V I +  T    +V++C + R   +N+  A  +L  K+  +  +
Sbjct: 36  KGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYDKITSINNK 95

Query: 291 KREEIANIGESSKTEI 306
            +E+I N  E  K +I
Sbjct: 96  AKEDIINQIEKEKRQI 111


>gi|293605771|ref|ZP_06688145.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815820|gb|EFF74927.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 138

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 26/92 (28%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTGV--------- 259
           V DS+ I+  E D      RA GAGGQ+VN   SA      VR +H+P  V         
Sbjct: 4   VQDSLYID--ERDLTFSMIRAQGAGGQNVNKVSSAVHLRFDVRASHLPLEVQDALCAVSD 61

Query: 260 ---------VVQCQQERSQHKNKAQAWNMLRA 282
                    V++ Q  RSQ KN+A+A   L A
Sbjct: 62  HRISKEGVIVIKSQSFRSQEKNRAEAIERLVA 93


>gi|241764161|ref|ZP_04762196.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN]
 gi|241366498|gb|EER60998.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN]
          Length = 135

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG---------------- 258
           +E++E++      RA GAGGQ+VN   SAV +      + +P                  
Sbjct: 6   LEVAEAEVEFTAMRAQGAGGQNVNKVSSAVHLRFDVGASSLPADVKERLLALRDTRITQD 65

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             VV++ QQ RSQ +N+A A   L A
Sbjct: 66  GVVVIKAQQYRSQEQNRADALARLNA 91


>gi|323700419|ref|ZP_08112331.1| Class I peptide chain release factor [Desulfovibrio sp. ND132]
 gi|323460351|gb|EGB16216.1| Class I peptide chain release factor [Desulfovibrio desulfuricans
           ND132]
          Length = 141

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           + I ES+ R    R+SG GGQHVNTTD+ V
Sbjct: 8   VSIPESELRFTACRSSGPGGQHVNTTDTRV 37


>gi|82539988|ref|XP_724342.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478956|gb|EAA15907.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 172

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           + +G GGQ VN T++ V I +  T    +V++C + R   +N+  A  +L  K+  +  +
Sbjct: 83  KGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYDKITSINNK 142

Query: 291 KREEIAN 297
            +E+I N
Sbjct: 143 VKEDIIN 149


>gi|84999574|ref|XP_954508.1| Dead/deah box RNA helicase [Theileria annulata]
 gi|65305506|emb|CAI73831.1| Dead/deah box RNA helicase, putative [Theileria annulata]
          Length = 988

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 221 IEISESDCRID--TYRASGAGGQHVNTTDSAVRITHI-PTGVV---VQCQQERSQHKNKA 274
            EISE + +++    +ASG GGQ +N +   V++ +  P+G +   ++C++ R+   N+ 
Sbjct: 82  FEISEPNSKLEEKYIKASGPGGQKINKSAICVQLNYSNPSGSIKINIKCKKHRTLILNRI 141

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           +A  +L AK+ E+   K +EI  I   +  E    R++
Sbjct: 142 EATEILIAKINEI---KEKEIMEIKRENFKEAMRNRKL 176


>gi|325273397|ref|ZP_08139654.1| hypothetical protein G1E_10188 [Pseudomonas sp. TJI-51]
 gi|324101470|gb|EGB99059.1| hypothetical protein G1E_10188 [Pseudomonas sp. TJI-51]
          Length = 137

 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 37/127 (29%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIP---------------TG- 258
           +++ ++D  +   RA GAGGQ+VN   SAV      R + +P               TG 
Sbjct: 8   VQLPDTDIELSYIRAQGAGGQNVNKVSSAVHLRFDIRASSLPAFYKERLLALRDSRITGD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-------ELQKREEIANIGESSKTEIGWG 309
             ++++ QQ R+Q +N+A A     A+L EL       E ++R     +G  SKT    G
Sbjct: 68  GVLIIKAQQFRTQEQNRADAL----ARLAELIIAAGKTEKKRRPTKPTLG--SKTRRLEG 121

Query: 310 RQIRSYV 316
           +  RS V
Sbjct: 122 KARRSTV 128


>gi|320102860|ref|YP_004178451.1| Class I peptide chain release factor [Isosphaera pallida ATCC
           43644]
 gi|319750142|gb|ADV61902.1| Class I peptide chain release factor [Isosphaera pallida ATCC
           43644]
          Length = 209

 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 203 HTSFS-SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           H + S S  ++P   D+  ++     C     R SG GGQ+ N  ++A+ + H PTG+ V
Sbjct: 20  HLAMSDSSTIHPAQWDAASLQ---RQCDTTRTRRSGPGGQNRNKVETAIVLVHRPTGIKV 76

Query: 262 QCQQERSQHKNKAQAWNMLRAKL 284
           +  + R Q +N   A   LR  L
Sbjct: 77  EANERRRQGENLQVALFRLRIAL 99


>gi|291616369|ref|YP_003519111.1| YaeJ [Pantoea ananatis LMG 20103]
 gi|291151399|gb|ADD75983.1| YaeJ [Pantoea ananatis LMG 20103]
 gi|327392820|dbj|BAK10242.1| class I peptide chain release factor YaeJ [Pantoea ananatis
           AJ13355]
          Length = 136

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           +E+ +S+  +   RA G+GGQHVN T +A+ +                      H+ TG 
Sbjct: 8   VELPDSEIELTAIRAQGSGGQHVNKTSTAIHLRFDIAASSLPPFYKERLLNASHHLITGD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
             V+++ Q+ RSQ  N+  A   L   + EL
Sbjct: 68  GTVIIKAQEYRSQEMNREAALQRLVNLIREL 98


>gi|16128184|ref|NP_414733.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
 gi|89107072|ref|AP_000852.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|170079828|ref|YP_001729148.1| hypothetical protein ECDH10B_0172 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238899590|ref|YP_002925386.1| hypothetical protein BWG_0184 [Escherichia coli BW2952]
 gi|256025504|ref|ZP_05439369.1| peptidyl-tRNA hydrolase domain protein [Escherichia sp. 4_1_40B]
 gi|300949774|ref|ZP_07163749.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1]
 gi|300956077|ref|ZP_07168401.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1]
 gi|301028687|ref|ZP_07191907.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1]
 gi|301646517|ref|ZP_07246391.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1]
 gi|307136792|ref|ZP_07496148.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli H736]
 gi|331640646|ref|ZP_08341794.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
 gi|1175507|sp|P40711|YAEJ_ECOLI RecName: Full=Uncharacterized protein yaeJ
 gi|845336|gb|AAA82971.1| orf 140; significant similarity to ORF next to beta-keto adipate
           succinyl CoA transferase from P. putida [Escherichia
           coli]
 gi|1552767|gb|AAB08619.1| hypothetical [Escherichia coli]
 gi|1785845|dbj|BAA08432.1| YaeJ [Escherichia coli W3110]
 gi|1786389|gb|AAC73302.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
 gi|85674377|dbj|BAA77867.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|169887663|gb|ACB01370.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|238860430|gb|ACR62428.1| conserved protein [Escherichia coli BW2952]
 gi|260450605|gb|ACX41027.1| Class I peptide chain release factor [Escherichia coli DH1]
 gi|299878286|gb|EFI86497.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1]
 gi|300317071|gb|EFJ66855.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1]
 gi|300450839|gb|EFK14459.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1]
 gi|301075270|gb|EFK90076.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1]
 gi|315134882|dbj|BAJ42041.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli DH1]
 gi|315616323|gb|EFU96941.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3431]
 gi|323939932|gb|EGB36130.1| RF-1 domain-containing protein [Escherichia coli E482]
 gi|331040392|gb|EGI12599.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
 gi|332341525|gb|AEE54859.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 140

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + EL  +K+
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEKK 103


>gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 177

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 203 HTSFSSIWVYPV-------VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            TS +++ + P        V   + +++ E+D      + SG GGQ +N    +V++ H 
Sbjct: 39  QTSAATLSIQPTQSQVPKEVKKRLPVQLVETDLVEKFTKGSGPGGQKINKCKHSVQLWHT 98

Query: 256 PTGVVVQCQQERSQHKNKAQA 276
           PTG+ V+ Q+ R    N+ +A
Sbjct: 99  PTGLFVETQRFRELASNRREA 119


>gi|266622715|ref|ZP_06115650.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865552|gb|EFC97850.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 51

 Score = 40.4 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/35 (57%), Positives = 24/35 (68%)

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +QPY MVKD RTN E  + + VLDG LD F+ A L
Sbjct: 1   MQPYTMVKDHRTNAETGNVNSVLDGALDLFIYAYL 35


>gi|99034620|ref|ZP_01314576.1| hypothetical protein Wendoof_01000612 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 89

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 7/81 (8%)

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A  +LRA+LYE+E QK+E         K++IG G    +IR+Y   P   + D R N+  
Sbjct: 1   ALKVLRARLYEIERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTS 57

Query: 333 TSPSDVL-DGDLDDFMKATLA 352
                ++ +G+LD+F++A ++
Sbjct: 58  HRLEQIIKEGELDEFIEALIS 78


>gi|332529476|ref|ZP_08405435.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624]
 gi|332041122|gb|EGI77489.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624]
          Length = 130

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 28/94 (29%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIPTG---------------- 258
           + I E +      RA G GGQ+VN   SAV      R + +P                  
Sbjct: 1   MPIPEHEVEFTAVRAQGPGGQNVNKVSSAVHLRFDIRASSLPEHVKDRLLAWPDQRVSKD 60

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
             VV++ Q  R+Q +NKA+AW    A+L EL  Q
Sbjct: 61  GVVVIKAQTARTQEQNKAEAW----ARLAELVAQ 90


>gi|302877867|ref|YP_003846431.1| Class I peptide chain release factor [Gallionella capsiferriformans
           ES-2]
 gi|302580656|gb|ADL54667.1| Class I peptide chain release factor [Gallionella capsiferriformans
           ES-2]
          Length = 136

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 24/89 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG------------- 258
           S  IEI +++  ++  RA GAGGQ+VN   SA+ +      + +P               
Sbjct: 4   SARIEIPDTEIELNAIRAQGAGGQNVNKVSSAIHLRFDINASSLPEEYKEKLRQLADRRI 63

Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRA 282
                ++++ Q+ RSQ KN+A A   L+A
Sbjct: 64  SNDDVIILKAQRFRSQDKNRADAMERLQA 92


>gi|298528758|ref|ZP_07016162.1| Class I peptide chain release factor [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512410|gb|EFI36312.1| Class I peptide chain release factor [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 137

 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 24/84 (28%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT----------------- 257
           + I ES+  +   RASG GGQ VN T SAV++      + +P                  
Sbjct: 7   LSIKESEIDLQAVRASGPGGQKVNKTASAVQLFFDIKASSLPQIYKERLLNLNDQRITRD 66

Query: 258 GV-VVQCQQERSQHKNKAQAWNML 280
           GV V++ ++ RSQ KNK +A   L
Sbjct: 67  GVIVIRAERSRSQAKNKKEALKKL 90


>gi|237729498|ref|ZP_04559979.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226909227|gb|EEH95145.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           + I +++  I   RA GAGGQHVN T +A+ +                      H+ +G 
Sbjct: 8   VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISGD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303
             ++++ Q+ RSQ  N+  A + L A + EL  +QK  +      +SK
Sbjct: 68  GIIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASK 115


>gi|283835254|ref|ZP_06354995.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC
           29220]
 gi|291068965|gb|EFE07074.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC
           29220]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           + I +++  I   RA GAGGQHVN T +A+ +                      H+ +G 
Sbjct: 8   VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAARHHLISGD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303
             ++++ Q+ RSQ  N+  A + L A + EL  +QK  +      +SK
Sbjct: 68  GVIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASK 115


>gi|254785908|ref|YP_003073337.1| peptidyl-tRNA hydrolase domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237686949|gb|ACR14213.1| peptidyl-tRNA hydrolase domain protein [Teredinibacter turnerae
           T7901]
          Length = 135

 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 24/84 (28%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTGV--------------- 259
            E+++ D R    RA GAGGQ+VN   SAV +      + +P  V               
Sbjct: 6   FELNDGDIRFSAMRAQGAGGQNVNKVSSAVLLRFDVHASVLPPAVKQRLFQKESGRINSE 65

Query: 260 ---VVQCQQERSQHKNKAQAWNML 280
              +++ QQ R+Q +NKA A   L
Sbjct: 66  GVLLIKAQQYRTQERNKADALERL 89


>gi|146310394|ref|YP_001175468.1| peptidyl-tRNA hydrolase domain protein [Enterobacter sp. 638]
 gi|145317270|gb|ABP59417.1| Class I peptide chain release factor [Enterobacter sp. 638]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 30/145 (20%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTG--------- 258
           +++ S  + I +S+  I   RA GAGGQHVN   +A      +R + +P           
Sbjct: 1   MIELSRTVSIPDSEFEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPESYKDALLAAS 60

Query: 259 ---------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
                    ++++ Q+ RSQ  N+  A   L A + EL + ++   A    +  T     
Sbjct: 61  HHLITSDGVIIIKAQEYRSQELNREAALARLVALIKELTVVQKSRRA----TRPTRASKE 116

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTS 334
           R++ S   +    VK LR  I ++S
Sbjct: 117 RRLSSKAQK--STVKSLRGKIRRSS 139


>gi|188533060|ref|YP_001906857.1| peptidyl-tRNA hydrolase domain protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028102|emb|CAO95959.1| Conserved hypothetical protein YaeJ [Erwinia tasmaniensis Et1/99]
          Length = 138

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVR--------------------ITH---IPT 257
           I I ++D  +   RA GAGGQHVN + +A+                     ++H    P 
Sbjct: 8   IVIPDADIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPEFYQQRMLAVSHHLITPE 67

Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           G V+++ Q+ RSQ  N+  A   L   + EL
Sbjct: 68  GMVIIKAQEYRSQEMNREAALKRLENLILEL 98


>gi|254966718|gb|ACT97351.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
           bacterium AM_gF3SD01_01]
 gi|254966740|gb|ACT97367.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
           bacterium AM_gF3SD01_07]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           + I +++  I   RA GAGGQHVN T +A+ +                      H+ +G 
Sbjct: 8   VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAASHHLISGD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303
             ++++ Q+ RSQ  N+  A + L A + EL  +QK  +      +SK
Sbjct: 68  GVIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASK 115


>gi|154244289|ref|YP_001415247.1| class I peptide chain release factor [Xanthobacter autotrophicus
           Py2]
 gi|154158374|gb|ABS65590.1| Class I peptide chain release factor [Xanthobacter autotrophicus
           Py2]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 30/119 (25%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-------THIPTGV------- 259
           +++ +  I ISE +  +   RASG GGQ+VN   SAV++        ++P GV       
Sbjct: 1   MIEITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRL 60

Query: 260 -----------VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
                      ++Q Q+ R+Q +N+  A     A+L EL ++    +A I   ++  +G
Sbjct: 61  AGKRMTQGGVIIIQAQRFRTQERNREDAV----ARLVEL-IRSATIVAPIRRPTRPTLG 114


>gi|261338810|ref|ZP_05966668.1| hypothetical protein ENTCAN_05005 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318633|gb|EFC57571.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 24/103 (23%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------------------- 253
           ++D S  + I +++  I   RA GAGGQHVN   +A+ +                     
Sbjct: 1   MIDLSRNVSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKERLLAAS 60

Query: 254 -HIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            H+ T    ++++ Q+ RSQ  N+  A + L A + EL  +++
Sbjct: 61  HHLITSDGVIIIKAQEYRSQELNREAALSRLVAVIKELTAEQK 103


>gi|51038077|gb|AAT93880.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 481

 Score = 40.0 bits (92), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D  + + + E+D  I    +      H N   SA+R+ HI TGV  +   ERS   NK +
Sbjct: 189 DRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMK 245

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           A + L+AKL  +  + R       +    E  + R+ RS
Sbjct: 246 AISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRS 284


>gi|161504640|ref|YP_001571752.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865987|gb|ABX22610.1| hypothetical protein SARI_02761 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 24/101 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV--RITHIPTG-------------------- 258
           I I++++  I   RA GAGGQHVN T SA+  R   + +G                    
Sbjct: 8   ISIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDILASGLPEYYKQRLLTASHHLISHD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A 
Sbjct: 68  GVIIIKAQEYRSQELNREAAIARLVAVIKELTAEQKSRRAT 108


>gi|209526204|ref|ZP_03274734.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209493301|gb|EDZ93626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 98

 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 51/81 (62%), Gaps = 7/81 (8%)

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +LRAKLY+++LQ+R+E   +    ++++G G    +IR+Y  +  + + D R   +
Sbjct: 7   RAIQILRAKLYDIKLQERQE--KVTSLRRSQVGTGARSEKIRTYNYKDNR-ITDHRLG-Q 62

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
             + +++LDGD+D  M+A ++
Sbjct: 63  NFTLANILDGDIDQVMEACIS 83


>gi|91203284|emb|CAJ72923.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 137

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 26/91 (28%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIP------------ 256
           + + + I I E    +   RA GAGGQHVN   +AV++      + +P            
Sbjct: 4   ISNKVTIPIDE--ISMHPIRAQGAGGQHVNKVATAVQLRFDINASSLPDFYKERLLSLSD 61

Query: 257 ---TG---VVVQCQQERSQHKNKAQAWNMLR 281
              +G   +V++ Q+ RSQ KNK  A N LR
Sbjct: 62  RRISGEGVIVIKAQKYRSQDKNKEDALNRLR 92


>gi|74317541|ref|YP_315281.1| hypothetical protein Tbd_1523 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057036|gb|AAZ97476.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 141

 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 25/92 (27%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVR----ITHIPT------------------ 257
           EIE+ E + + D  RASG GGQ+VN   SAV+    + H P+                  
Sbjct: 7   EIELDEREIQEDFVRASGPGGQNVNKVSSAVQLRFDVAHSPSLPQPVRDRLLVLAGRRVT 66

Query: 258 --GV-VVQCQQERSQHKNKAQAWNMLRAKLYE 286
             GV +++ ++ RSQ +N+  A   L A + E
Sbjct: 67  QDGVLIIEAERYRSQRRNRDDALERLLALIRE 98


>gi|194336150|ref|YP_002017944.1| Class I peptide chain release factor [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308627|gb|ACF43327.1| Class I peptide chain release factor [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 137

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 28/120 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG---------------- 258
           I I + +  + T RA GAGGQ+VN  ++AV +      + +P                  
Sbjct: 8   IAIPDEEIELQTMRAQGAGGQNVNKVETAVHLRFDVKASSLPEDFREKLLLLKDHRMTKD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             ++++ Q+ RSQ KN+  A   L+A L  + L     +     +S T+    R+I S V
Sbjct: 68  GVIIIKAQRYRSQEKNRTDALMRLQALLQHVAL----PVKKRKPTSPTKSSKERRIESKV 123


>gi|326333804|ref|ZP_08200037.1| class I peptide chain release factor [Nocardioidaceae bacterium
           Broad-1]
 gi|325948386|gb|EGD40493.1| class I peptide chain release factor [Nocardioidaceae bacterium
           Broad-1]
          Length = 141

 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 19/73 (26%)

Query: 234 RASGAGGQHVNTTDSAVRIT-------------------HIPTGVVVQCQQERSQHKNKA 274
           R+ G GGQ VNTTDS V ++                     P  + V   ++RSQH+N+ 
Sbjct: 29  RSPGPGGQSVNTTDSRVELSWDPSASEALDESQRARILARSPGPITVVSHEQRSQHRNRV 88

Query: 275 QAWNMLRAKLYEL 287
            A   L  ++ EL
Sbjct: 89  AARERLALRIREL 101


>gi|164414764|pdb|2JY9|A Chain A, Nmr Structure Of Putative Trna Hydrolase Domain From
           Salmonella Typhimurium. Northeast Structural Genomics
           Consortium Target Str220
          Length = 148

 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 24/101 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T SA      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           GV +++ Q+ RSQ  N+  A   L A + EL  +++   A 
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108


>gi|283783979|ref|YP_003363844.1| peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
 gi|282947433|emb|CBG86979.1| putative peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
          Length = 139

 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 24/101 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HI--PT 257
           + I+E +  I   RA GAGGQHVN   +A+ +                      H+  P 
Sbjct: 8   VSIAEDELEITAIRAQGAGGQHVNKASTAIHLRFDIRASGLPEYYKERLLAASHHLISPD 67

Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           G ++++ Q+ RSQ  N+  A   L A + EL ++++   A 
Sbjct: 68  GIIIIKAQEYRSQTLNREAALARLVAVIKELTVEQKSRRAT 108


>gi|16759231|ref|NP_454848.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140780|ref|NP_804122.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213028871|ref|ZP_03343318.1| hypothetical protein Salmonelentericaenterica_44358 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
 gi|213161619|ref|ZP_03347329.1| hypothetical protein Salmoneentericaenterica_17067 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213423698|ref|ZP_03356678.1| hypothetical protein Salmonentericaenterica_40183 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213428150|ref|ZP_03360900.1| hypothetical protein SentesTyphi_22790 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213584325|ref|ZP_03366151.1| hypothetical protein SentesTyph_25140 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213646231|ref|ZP_03376284.1| hypothetical protein SentesTy_02100 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213850219|ref|ZP_03381117.1| hypothetical protein SentesT_00953 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289830086|ref|ZP_06547526.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25369510|pir||AC0532 probable release factor STY0265 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16501522|emb|CAD08699.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136404|gb|AAO67971.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 140

 Score = 39.7 bits (91), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 24/101 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T SA      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           GV +++ Q+ RSQ  N+  A   L A + EL  +++   A 
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108


>gi|16763630|ref|NP_459245.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62178810|ref|YP_215227.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161612615|ref|YP_001586580.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553345|ref|ZP_02347094.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167990129|ref|ZP_02571229.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230551|ref|ZP_02655609.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168235022|ref|ZP_02660080.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168245010|ref|ZP_02669942.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264649|ref|ZP_02686622.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168464194|ref|ZP_02698097.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446732|ref|YP_002039480.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450266|ref|YP_002044230.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194471764|ref|ZP_03077748.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736606|ref|YP_002113263.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197251225|ref|YP_002145245.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197263410|ref|ZP_03163484.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198243513|ref|YP_002214201.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388576|ref|ZP_03215188.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207855758|ref|YP_002242409.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224582087|ref|YP_002635885.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911306|ref|ZP_04655143.1| hypothetical protein SentesTe_09240 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16418746|gb|AAL19204.1| putative-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62126443|gb|AAX64146.1| putative-tRNA hydrolase domain [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161361979|gb|ABX65747.1| hypothetical protein SPAB_00306 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405395|gb|ACF65617.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408570|gb|ACF68789.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194458128|gb|EDX46967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194712108|gb|ACF91329.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632557|gb|EDX51011.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197214928|gb|ACH52325.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197241665|gb|EDY24285.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197292024|gb|EDY31374.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197938029|gb|ACH75362.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199605674|gb|EDZ04219.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205322185|gb|EDZ10024.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205331555|gb|EDZ18319.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334913|gb|EDZ21677.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336203|gb|EDZ22967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205346929|gb|EDZ33560.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707561|emb|CAR31835.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224466614|gb|ACN44444.1| hypothetical protein SPC_0256 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245472|emb|CBG23262.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267991931|gb|ACY86816.1| hypothetical protein STM14_0282 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301156867|emb|CBW16343.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911210|dbj|BAJ35184.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225173|gb|EFX50233.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713264|gb|EFZ04835.1| Class I peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323128560|gb|ADX15990.1| Uncharacterized protein yaeJ [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326621944|gb|EGE28289.1| Class I peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|332987192|gb|AEF06175.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 140

 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 24/101 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T SA      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           GV +++ Q+ RSQ  N+  A   L A + EL  +++   A 
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108


>gi|322616064|gb|EFY12981.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620847|gb|EFY17707.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623802|gb|EFY20639.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627250|gb|EFY24041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322630557|gb|EFY27321.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638225|gb|EFY34926.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640710|gb|EFY37361.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645506|gb|EFY42033.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648201|gb|EFY44668.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322657151|gb|EFY53434.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657521|gb|EFY53793.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663841|gb|EFY60041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666674|gb|EFY62852.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672168|gb|EFY68280.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676521|gb|EFY72592.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679387|gb|EFY75432.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686286|gb|EFY82270.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323193466|gb|EFZ78674.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197512|gb|EFZ82647.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201219|gb|EFZ86288.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209614|gb|EFZ94547.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212134|gb|EFZ96958.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216439|gb|EGA01165.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323223371|gb|EGA07706.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225932|gb|EGA10152.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228527|gb|EGA12656.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236860|gb|EGA20936.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239640|gb|EGA23687.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242313|gb|EGA26342.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249975|gb|EGA33871.1| hypothetical protein SEEM9199_18642 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252405|gb|EGA36256.1| hypothetical protein SEEM8282_19849 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255688|gb|EGA39441.1| hypothetical protein SEEM8283_01112 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262875|gb|EGA46425.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265361|gb|EGA48857.1| hypothetical protein SEEM8285_04625 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271852|gb|EGA55270.1| hypothetical protein SEEM8287_04917 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 140

 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T SA      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           GV +++ Q+ RSQ  N+  A   L A + EL
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKEL 98


>gi|17232188|ref|NP_488736.1| peptidyl-tRNA hydrolase domain protein [Nostoc sp. PCC 7120]
 gi|17133833|dbj|BAB76395.1| alr4696 [Nostoc sp. PCC 7120]
          Length = 137

 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 24/88 (27%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT-------------- 257
           S +I I +S+  I   R+ GAGGQ+VN   +A+ +      + +PT              
Sbjct: 5   SQKIIIPDSEIEISAIRSQGAGGQNVNKVSTAIHLRFNIEASSLPTFYKEQLLKLNDRRI 64

Query: 258 ---GVVV-QCQQERSQHKNKAQAWNMLR 281
              GVVV + Q+ RSQ +NK +A   L+
Sbjct: 65  NQEGVVVIKAQEHRSQEQNKEEALQRLK 92


>gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
          Length = 544

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D         G GGQ+VN   + V + H+PTG+ V+  ++R   +N+  A   L+ 
Sbjct: 414 LEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPTGLSVKVHEDRLLQRNRIIARVRLQE 473

Query: 283 KLYEL 287
           KL +L
Sbjct: 474 KLDQL 478


>gi|254448925|ref|ZP_05062380.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
 gi|198261462|gb|EDY85752.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
          Length = 140

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 26/91 (28%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT----------- 257
           + +++ I ++E DC     RA GAGGQ+VN   SA+ +      + +P            
Sbjct: 6   ISNNVSIALAEIDC--QAVRAQGAGGQNVNKVASAIHLRFDVARSSLPQFYRDRLLALND 63

Query: 258 ------GV-VVQCQQERSQHKNKAQAWNMLR 281
                 GV V++ Q+ R+Q KN+  A N L+
Sbjct: 64  QRLSKEGVIVIKAQRFRTQEKNREDALNRLK 94


>gi|289805029|ref|ZP_06535658.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 121

 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 24/96 (25%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T SA      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           GV +++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQK 103


>gi|148271389|ref|YP_001220950.1| hypothetical protein CMM_0210 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829319|emb|CAN00232.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 140

 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           + I  ++ R    R+SG GGQHVNT+DS V++T  P   +V   Q+R++
Sbjct: 9   LTIPAAELRWRFSRSSGPGGQHVNTSDSRVQLTWSPVESLVLNDQQRAR 57


>gi|33595815|ref|NP_883458.1| hypothetical protein BPP1141 [Bordetella parapertussis 12822]
 gi|81429531|sp|Q7WB66|MIAB_BORPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33565894|emb|CAE36442.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 475

 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIH 158
           E ++F++L     D   A++ +  G        + +  +  YTR  E  R F    LEI 
Sbjct: 156 EIEKFDALPPPRVDGATAFVSIMEGC-----SKYCSFCVVPYTRGEEVSRPFDDVLLEIA 210

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           D  + G+K  TLL +  NAY    G+ G
Sbjct: 211 DLADQGVKEVTLLGQNVNAYRGAMGDSG 238


>gi|46575986|gb|AAT01347.1| unknown protein [Oryza sativa Japonica Group]
          Length = 499

 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D  + + + E+D  I    +      H N   SA+R+ HI TGV  +   ERS   NK +
Sbjct: 189 DRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMK 245

Query: 276 AWNMLRAKL 284
           A + L+AKL
Sbjct: 246 AISRLKAKL 254


>gi|332978825|gb|EGK15509.1| peptidyl-tRNA hydrolase domain protein [Psychrobacter sp.
           1501(2011)]
          Length = 137

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 28/88 (31%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAV-------------------------RITH 254
           +I ++ESD  I   RA GAGGQ+VN   SA+                         RIT 
Sbjct: 7   KISLNESDIEITAIRAQGAGGQNVNKVSSAIHLRFDINASSLSDEQKQQLLNSKDNRITK 66

Query: 255 IPTGV-VVQCQQERSQHKNKAQAWNMLR 281
              GV +++ QQ R+Q +NK  A   L+
Sbjct: 67  --DGVLIIKAQQYRTQERNKIDAMERLK 92


>gi|168823089|ref|ZP_02835089.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205340613|gb|EDZ27377.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320084494|emb|CBY94287.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 140

 Score = 39.3 bits (90), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T SA      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           GV +++ Q+ RSQ  N+  A   L A + EL
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKEL 98


>gi|332286820|ref|YP_004418731.1| hypothetical protein PT7_3567 [Pusillimonas sp. T7-7]
 gi|330430773|gb|AEC22107.1| hypothetical protein PT7_3567 [Pusillimonas sp. T7-7]
          Length = 136

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 28/91 (30%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-HIPTG--------------------- 258
           I +SE +      R+ GAGGQ+VN   SA+ +   IP                       
Sbjct: 6   ISVSEEEIVFTAIRSQGAGGQNVNKVSSAIHLRFSIPDSSLPEPIKARLLALRDQRITAE 65

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
             VV++ Q  RSQ +NKA+A     A+L EL
Sbjct: 66  GVVVIKAQSSRSQEQNKAEAI----ARLQEL 92


>gi|33592184|ref|NP_879828.1| hypothetical protein BP1041 [Bordetella pertussis Tohama I]
 gi|81578782|sp|Q7VZ86|MIAB_BORPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33571829|emb|CAE41341.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332381601|gb|AEE66448.1| hypothetical protein BPTD_1035 [Bordetella pertussis CS]
          Length = 447

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIH 158
           E ++F++L     D   A++ +  G        + +  +  YTR  E  R F    LE+ 
Sbjct: 128 EIEKFDALPPPRVDGATAFVSIMEGC-----SKYCSFCVVPYTRGEEVSRPFDDVLLEVA 182

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           D  + G+K  TLL +  NAY    G+ G
Sbjct: 183 DLADQGVKEVTLLGQNVNAYRGAMGDSG 210


>gi|293394733|ref|ZP_06639025.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
 gi|291422859|gb|EFE96096.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
          Length = 137

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 24/93 (25%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------------------- 253
           +++ S  + I++ +  +   RA GAGGQHVN T +A+ +                     
Sbjct: 1   MLELSRNVAIADHEIELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN 60

Query: 254 -HIPTG---VVVQCQQERSQHKNKAQAWNMLRA 282
            H+ TG   V+++ Q+ RSQ  N+  A   L A
Sbjct: 61  HHLITGDGVVIIKAQEYRSQELNREAALARLVA 93


>gi|317406423|gb|EFV86637.1| hypothetical protein HMPREF0005_05619 [Achromobacter xylosoxidans
           C54]
          Length = 138

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 30/96 (31%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTG---------- 258
           V DS+ I+  E +      RA GAGGQ+VN   SA      VR + +P            
Sbjct: 4   VQDSLYID--EREIEFSMIRAQGAGGQNVNKVSSAVHLRFDVRASSLPAEIQEALCAMND 61

Query: 259 --------VVVQCQQERSQHKNKAQA----WNMLRA 282
                   +V++ Q  RSQ KN+A+A     NM+RA
Sbjct: 62  HRISKEGVIVIKSQSFRSQDKNRAEAIERLMNMVRA 97


>gi|114777943|ref|ZP_01452857.1| Protein chain release factor B [Mariprofundus ferrooxydans PV-1]
 gi|114551730|gb|EAU54282.1| Protein chain release factor B [Mariprofundus ferrooxydans PV-1]
          Length = 146

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 24/91 (26%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG--------- 258
           V++ S  + I++ +  I+  RA GAGGQ+VN   SA+ +      + +P           
Sbjct: 10  VLEISNTVSIADDEIEINAIRAQGAGGQNVNKVASAIHLRFDIHASSLPDAYKQRLLARQ 69

Query: 259 ---------VVVQCQQERSQHKNKAQAWNML 280
                    ++++ QQ RSQ +N+A A   L
Sbjct: 70  DQRISKEGIIIIKAQQFRSQEQNRADALTRL 100


>gi|323975640|gb|EGB70736.1| RF-1 domain-containing protein [Escherichia coli TW10509]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|33600343|ref|NP_887903.1| hypothetical protein BB1357 [Bordetella bronchiseptica RB50]
 gi|81431747|sp|Q7WMN3|MIAB_BORBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33567942|emb|CAE31855.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 475

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIH 158
           E ++F++L     D   A++ +  G        + +  +  YTR  E  R F    LE+ 
Sbjct: 156 EIEKFDALPPPRVDGATAFVSIMEGC-----SKYCSFCVVPYTRGEEVSRPFDDVLLEVA 210

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           D  + G+K  TLL +  NAY    G+ G
Sbjct: 211 DLADQGVKEVTLLGQNVNAYRGAMGDSG 238


>gi|319792789|ref|YP_004154429.1| class i peptide chain release factor [Variovorax paradoxus EPS]
 gi|315595252|gb|ADU36318.1| Class I peptide chain release factor [Variovorax paradoxus EPS]
          Length = 135

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 31/94 (32%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH------IPTGV------- 259
           P++ D  E+EIS         RA GAGGQ+VN   SAV + +      +P  V       
Sbjct: 5   PILIDPDEVEIS-------AIRAQGAGGQNVNKVSSAVHLRYDIHASSLPADVKERLLAL 57

Query: 260 -----------VVQCQQERSQHKNKAQAWNMLRA 282
                      V++ QQ R+Q  N+A A   L+A
Sbjct: 58  RDSRITQEGVFVLKAQQHRTQEMNRADALARLQA 91


>gi|253995820|ref|YP_003047884.1| Class I peptide chain release factor [Methylotenera mobilis JLW8]
 gi|253982499|gb|ACT47357.1| Class I peptide chain release factor [Methylotenera mobilis JLW8]
          Length = 134

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 24/84 (28%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV-----------------RITHIPTG----- 258
           I+I ESD  +   RA GAGGQ+VN   SA+                 R+ H+        
Sbjct: 4   IQIPESDYELTAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDWLKERLLHLKDNRINDD 63

Query: 259 --VVVQCQQERSQHKNKAQAWNML 280
             +V++ QQ R+Q  NK  A   L
Sbjct: 64  GVLVIKAQQYRTQEANKKDAVQRL 87


>gi|170780828|ref|YP_001709160.1| hypothetical protein CMS_0381 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155396|emb|CAQ00502.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 31/49 (63%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           + I  ++ R    R+SG GGQHVNT+DS V++T    G +V   ++R++
Sbjct: 9   LTIPAAELRWRFSRSSGPGGQHVNTSDSRVQLTWYAAGSMVLSDEQRAR 57


>gi|332187078|ref|ZP_08388818.1| RF-1 domain protein [Sphingomonas sp. S17]
 gi|332012778|gb|EGI54843.1| RF-1 domain protein [Sphingomonas sp. S17]
          Length = 141

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 20/30 (66%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           I I E +      RASG GGQHVNTTDSAV
Sbjct: 10  IAIDEREIGESFTRASGPGGQHVNTTDSAV 39


>gi|170680631|ref|YP_001742320.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
 gi|293418077|ref|ZP_06660699.1| yaeJ protein [Escherichia coli B185]
 gi|331651097|ref|ZP_08352125.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
 gi|170518349|gb|ACB16527.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
 gi|291430795|gb|EFF03793.1| yaeJ protein [Escherichia coli B185]
 gi|309700400|emb|CBI99688.1| putative peptidyl-tRNA hydrolase [Escherichia coli ETEC H10407]
 gi|331051551|gb|EGI23600.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 24/96 (25%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I + +  I   RA GAGGQHVN T +A      +R + +P                  
Sbjct: 8   VAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 68  GVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|323935032|gb|EGB31405.1| RF-1 domain-containing protein [Escherichia coli E1520]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKEHLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|308048193|ref|YP_003911759.1| class I peptide chain release factor [Ferrimonas balearica DSM
           9799]
 gi|307630383|gb|ADN74685.1| Class I peptide chain release factor [Ferrimonas balearica DSM
           9799]
          Length = 141

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 25/105 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR----ITH------------------- 254
           S  + I  ++      RASG GGQHVN T +A+     + H                   
Sbjct: 5   SSRVSIPANELEFQMIRASGPGGQHVNKTSTAIMLIFDVKHSTALPDHYKSRILARAHPN 64

Query: 255 -IPTG-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
             P G ++++ QQ RSQ  N+  A   L+A +    + +++ IA 
Sbjct: 65  LTPGGKIIIKAQQYRSQEMNRQDALERLKAMIDAAMVVQKKRIAT 109


>gi|302421296|ref|XP_003008478.1| peptidyl-tRNA hydrolase domain-containing protein [Verticillium
           albo-atrum VaMs.102]
 gi|261351624|gb|EEY14052.1| peptidyl-tRNA hydrolase domain-containing protein [Verticillium
           albo-atrum VaMs.102]
          Length = 202

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 23/117 (19%)

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIA----- 296
           N T+SAV++ HIPTG+V++ Q  RS+ +N+  A  +L  +L +LE   Q R  I      
Sbjct: 77  NKTNSAVQLKHIPTGIVIKSQATRSRSQNRKIARQLLAERLDDLENGDQSRNAIVAEAKR 136

Query: 297 ---------------NIGESSKTEIGWGRQIRSYVLQPYQMVK-DLRTNIEKTSPSD 337
                           + ++ + +   G  I + V       +  + TN+EKT+P+D
Sbjct: 137 KKAASAAKKSKRKYRKLEDAGRHDGQPGDDITATVAPETDTGRVQVPTNLEKTNPTD 193


>gi|218547647|ref|YP_002381438.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia
           fergusonii ATCC 35469]
 gi|218355188|emb|CAQ87795.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|302036838|ref|YP_003797160.1| putative peptide chain release factor, class I [Candidatus
           Nitrospira defluvii]
 gi|190343252|gb|ACE75640.1| peptidyl-tRNA hydrolase domain protein [Candidatus Nitrospira
           defluvii]
 gi|300604902|emb|CBK41235.1| putative Peptide chain release factor, class I [Candidatus
           Nitrospira defluvii]
          Length = 138

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 24/87 (27%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT-------------- 257
           S  + I + +  +   RA GAGGQHVN   SA+ +      + +P               
Sbjct: 5   STHVSIPDEEIELTAVRAQGAGGQHVNKVSSAIHLRFNILGSSLPPFYKERLLALRDHRI 64

Query: 258 ----GVVVQCQQERSQHKNKAQAWNML 280
                ++++ Q  RSQ +N+A A   L
Sbjct: 65  SREGTIIIKAQDSRSQERNRALALERL 91


>gi|204926867|ref|ZP_03218069.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204323532|gb|EDZ08727.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 24/101 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T SA      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           GV +++ Q+ RSQ  N+  A   L A + E   ++++  A 
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKEFTAEQKKRRAT 108


>gi|146342892|ref|YP_001207940.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium
           sp. ORS278]
 gi|146195698|emb|CAL79725.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. ORS278]
          Length = 139

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 31/127 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAV-------RITHIP-------------- 256
           S ++ I E+D  I   RASG GGQ+VN   ++        RIT +P              
Sbjct: 5   SRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAARLARLAGQR 63

Query: 257 ---TGV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQ---KREEIANIGESSKTEIGWG 309
              TGV V+Q ++ R+Q +NKA A   L   L E  ++   +R      G  SK     G
Sbjct: 64  MTKTGVIVIQAERFRTQERNKADAIERLVTLLREAMVRPKVRRPTKPTFG--SKQRRLEG 121

Query: 310 RQIRSYV 316
           ++IRS V
Sbjct: 122 KKIRSDV 128


>gi|213161326|ref|ZP_03347036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 42

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 1   RSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 38


>gi|261414426|ref|YP_003248109.1| hypothetical protein Fisuc_0012 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261370882|gb|ACX73627.1| hypothetical protein Fisuc_0012 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327448|gb|ADL26649.1| putative peptide chain release factor [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 163

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C +  Y+ SG GGQH N T++ V ++     + ++  + RS  +NK  A + ++     L
Sbjct: 18  CTLKGYQGSGPGGQHRNKTNTGVHLSLQQYNLEIKSSESRSAKENKIHALHHMQ---MAL 74

Query: 288 ELQKREE 294
            L  REE
Sbjct: 75  ALNVREE 81


>gi|307824425|ref|ZP_07654650.1| Class I peptide chain release factor [Methylobacter tundripaludum
           SV96]
 gi|307734409|gb|EFO05261.1| Class I peptide chain release factor [Methylobacter tundripaludum
           SV96]
          Length = 138

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 24/89 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIP--------------- 256
           S ++ I +++  +   RA GAGGQ+VN   SAV +      + +P               
Sbjct: 5   SNQVSIPDNEIEVHAIRAQGAGGQNVNKVSSAVHLRFDINASSLPEFYKEKLLALNDQRI 64

Query: 257 --TGV-VVQCQQERSQHKNKAQAWNMLRA 282
              GV +++ QQ R+Q KNK  A + L+A
Sbjct: 65  SKEGVIIIKAQQYRTQEKNKEDALSRLQA 93


>gi|93005695|ref|YP_580132.1| class I peptide chain release factor [Psychrobacter cryohalolentis
           K5]
 gi|92393373|gb|ABE74648.1| Class I peptide chain release factor [Psychrobacter cryohalolentis
           K5]
          Length = 137

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---THIPT-------------------- 257
           I +++SD  I   RA GAGGQ+VN   SA+ +    H  +                    
Sbjct: 8   ISLNDSDVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDVNKQRLLDSKDSRISKE 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRA 282
           GV +++ QQ R+Q +NK  A+  L++
Sbjct: 68  GVLIIKAQQFRTQERNKIDAFERLQS 93


>gi|323190408|gb|EFZ75683.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli RN587/1]
 gi|324112397|gb|EGC06374.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|126700551|ref|YP_001089448.1| hypothetical protein CD2933 [Clostridium difficile 630]
 gi|115251988|emb|CAJ69824.1| Hypothetical protein CD630_29330 [Clostridium difficile]
          Length = 108

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           V + D +V +THIPTG+ V+C+   S  KNK +   +L  +L ++
Sbjct: 54  VKSKDYSVEVTHIPTGITVKCRSTNSILKNKNKCLEVLEEELIKI 98


>gi|325496123|gb|EGC93982.1| peptidyl-tRNA hydrolase domain protein [Escherichia fergusonii
           ECD227]
          Length = 140

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|238759925|ref|ZP_04621079.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236]
 gi|238701832|gb|EEP94395.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236]
          Length = 138

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             V+++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVVIIKAQEYRSQDMNREAALARLVA 93


>gi|291614774|ref|YP_003524931.1| class I peptide chain release factor [Sideroxydans lithotrophicus
           ES-1]
 gi|291584886|gb|ADE12544.1| Class I peptide chain release factor [Sideroxydans lithotrophicus
           ES-1]
          Length = 137

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG---------------- 258
           + I E +  +   RA GAGGQ+VN   SAV +      + +P                  
Sbjct: 8   VVIPEREIELTAVRAQGAGGQNVNKVSSAVHLRFDIAASSLPPEFKERLLQLSDQRITRD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             VV++ Q+ R+Q +N+ +A   L++ L  + ++ +  +A
Sbjct: 68  GVVVIKAQEFRNQEQNRNEALRRLKSLLMSIAVKPKPRVA 107


>gi|238784903|ref|ZP_04628903.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC
           43970]
 gi|238714220|gb|EEQ06232.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC
           43970]
          Length = 138

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             V+++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVVIIKAQEYRSQDMNREAALARLVA 93


>gi|82703524|ref|YP_413090.1| class I peptide chain release factor [Nitrosospira multiformis ATCC
           25196]
 gi|82411589|gb|ABB75698.1| Class I peptide chain release factor [Nitrosospira multiformis ATCC
           25196]
          Length = 140

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 28/87 (32%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAV-------------------------RITH 254
           +I+I + +  I   RA GAGGQ+VN   SAV                         RIT 
Sbjct: 6   KIDIPDHEVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASSLSDIHKERLLKLHDQRITR 65

Query: 255 IPTGV-VVQCQQERSQHKNKAQAWNML 280
              GV +++ QQ RSQ KN+ +A   L
Sbjct: 66  --EGVIIIKAQQYRSQEKNREEALRRL 90


>gi|619672|gb|AAA86092.1| ORF140 [Escherichia coli]
          Length = 124

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 24/87 (27%)

Query: 230 IDTYRASGAGGQHVNTTDSA------VRITHIPT-----------------GV-VVQCQQ 265
           I   RA GAGGQHVN T +A      +R + +P                  GV V++ Q+
Sbjct: 1   ITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQE 60

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKR 292
            RSQ  N+  A   L A + EL  +K+
Sbjct: 61  YRSQELNREAALARLVAMIKELTTEKK 87


>gi|238796634|ref|ZP_04640141.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC
           43969]
 gi|238719612|gb|EEQ11421.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC
           43969]
          Length = 138

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             V+++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVVIIKAQEYRSQDMNREAALARLVA 93


>gi|78355249|ref|YP_386698.1| hypothetical protein Dde_0202 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217654|gb|ABB37003.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 143

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 25/95 (26%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS--AVRITHIPTGVV------------ 260
           +DD   + I E +      R SG GGQHVN T S   VR   + + V+            
Sbjct: 6   LDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKERIASRL 65

Query: 261 -----------VQCQQERSQHKNKAQAWNMLRAKL 284
                      V C   RSQH N+  A   L A L
Sbjct: 66  ASRISSAGELAVSCADGRSQHANRRTALQRLAALL 100


>gi|238792731|ref|ZP_04636362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC
           29909]
 gi|238727839|gb|EEQ19362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC
           29909]
          Length = 138

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPDYYKERLLLLNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             V+++ Q+ RSQ  N+  A   L A
Sbjct: 68  GIVIIKAQEYRSQDMNREAALARLVA 93


>gi|307293298|ref|ZP_07573144.1| Class I peptide chain release factor [Sphingobium chlorophenolicum
           L-1]
 gi|306881364|gb|EFN12580.1| Class I peptide chain release factor [Sphingobium chlorophenolicum
           L-1]
          Length = 141

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 4/39 (10%)

Query: 215 VDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRI 252
           V  SI I+  E     +T+ R++GAGGQHVNTTDSAV++
Sbjct: 6   VTRSIAIDTDELS---ETFVRSTGAGGQHVNTTDSAVQL 41


>gi|56412513|ref|YP_149588.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361448|ref|YP_002141084.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56126770|gb|AAV76276.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092924|emb|CAR58353.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 140

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 24/101 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I++++  I   RA GAGGQHVN T  A      +R + +P                  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSGAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           GV +++ Q+ RSQ  N+  A   L A + EL  +++   A 
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108


>gi|323964915|gb|EGB60381.1| RF-1 domain-containing protein [Escherichia coli M863]
 gi|327255171|gb|EGE66774.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_7v]
          Length = 140

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I   +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPNGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|294011513|ref|YP_003544973.1| protein chain release factor B [Sphingobium japonicum UT26S]
 gi|292674843|dbj|BAI96361.1| protein chain release factor B [Sphingobium japonicum UT26S]
          Length = 141

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 15/20 (75%), Positives = 19/20 (95%)

Query: 233 YRASGAGGQHVNTTDSAVRI 252
            R++GAGGQHVNTTDSAV++
Sbjct: 22  VRSTGAGGQHVNTTDSAVQL 41


>gi|296101362|ref|YP_003611508.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055821|gb|ADF60559.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 140

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           + I +++  I   RA GAGGQHVN   +A+ +                      H+ T  
Sbjct: 8   VSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKESLLAASHHLITSD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
             +V++ Q+ RSQ  N+  A   L A + EL
Sbjct: 68  GVIVIKAQEYRSQELNREAAMARLVAVIKEL 98


>gi|238787211|ref|ZP_04631010.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC
           33641]
 gi|238724473|gb|EEQ16114.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC
           33641]
          Length = 164

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           I +++S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   ISLADSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLALNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             ++++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVIIIKAQEYRSQDMNREAAQQRLVA 93


>gi|238763955|ref|ZP_04624911.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC
           33638]
 gi|238697772|gb|EEP90533.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC
           33638]
          Length = 138

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEVELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             ++++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVIIIKAQEYRSQDMNREAAQQRLVA 93


>gi|157147376|ref|YP_001454695.1| peptidyl-tRNA hydrolase domain protein [Citrobacter koseri ATCC
           BAA-895]
 gi|157084581|gb|ABV14259.1| hypothetical protein CKO_03174 [Citrobacter koseri ATCC BAA-895]
          Length = 140

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I +++  I   RA GAGGQHVN T +A      +R + +P                  
Sbjct: 8   VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAASHHLISSD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           GV +++ Q+ RSQ  N+  A   L A + EL
Sbjct: 68  GVIIIKAQEYRSQELNREAAIARLVAVIKEL 98


>gi|326536273|ref|YP_004300714.1| hypothetical protein Acj133p133 [Acinetobacter phage 133]
 gi|299483354|gb|ADJ19448.1| hypothetical protein Acj133p133 [Acinetobacter phage 133]
          Length = 76

 Score = 37.4 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           D R++ YR +G     +N   +  R+THIP+G+   C  E    +NK +A + L  ++
Sbjct: 9   DIRVEWYR-TGRAWTELNRAPTGCRLTHIPSGLTACCGTEHGSVRNKNEAMSRLEKRV 65


>gi|297794897|ref|XP_002865333.1| hypothetical protein ARALYDRAFT_917116 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311168|gb|EFH41592.1| hypothetical protein ARALYDRAFT_917116 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 130

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRIT 253
           CR++T+R SG GG+H N  DSAV  T
Sbjct: 99  CRLETFRVSGPGGKHRNKRDSAVHST 124


>gi|123443461|ref|YP_001007434.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122090422|emb|CAL13290.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 138

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLSLNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             ++++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVIIIKAQEYRSQDMNREAALARLVA 93


>gi|318606906|emb|CBY28404.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 138

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             ++++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVIIIKAQEYRSQDMNREAALVRLVA 93


>gi|269968349|ref|ZP_06182368.1| hypothetical protein VMC_37980 [Vibrio alginolyticus 40B]
 gi|269827035|gb|EEZ81350.1| hypothetical protein VMC_37980 [Vibrio alginolyticus 40B]
          Length = 137

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 24/99 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIPTG---------------- 258
           + I E + ++   RA G GGQ+VN   SA+      R + +P                  
Sbjct: 8   VTIQEWEIQLSPIRAQGNGGQNVNKVASAIHLRFDIRNSSLPDFYKERLLALSDSRISKD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
             ++++ QQ R+Q +NK  A N L+A +    LQ+++ I
Sbjct: 68  GVIIIKAQQFRTQEQNKEDALNRLQALIKAAALQEKKRI 106


>gi|262274222|ref|ZP_06052034.1| class I peptide chain release factor [Grimontia hollisae CIP
           101886]
 gi|262222032|gb|EEY73345.1| class I peptide chain release factor [Grimontia hollisae CIP
           101886]
          Length = 137

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 32/129 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT----------------- 257
           + I   +  +   RA GAGGQHVN   SAV +      + +P                  
Sbjct: 8   VSIPNDEIDLSYIRAQGAGGQHVNKVSSAVHLRFDINASSLPEFYKERLLALKDSRLSKD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGES-------SKTEIGW 308
           GV V++ QQ R+Q KN+  A   L+A +  +  +QK         S       SKT+ G 
Sbjct: 68  GVIVIKAQQFRTQEKNREDALQRLQALVKSVTAVQKARRATKPTRSSQRKRMDSKTQRGK 127

Query: 309 GRQIRSYVL 317
            + +R  V+
Sbjct: 128 TKSLRGKVM 136


>gi|332160616|ref|YP_004297193.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325664846|gb|ADZ41490.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860910|emb|CBX71190.1| uncharacterized protein yaeJ [Yersinia enterocolitica W22703]
          Length = 138

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                     +H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLSLNSHLMTAE 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
             ++++ Q+ RSQ  N+  A   L A
Sbjct: 68  GVIIIKAQEYRSQDMNREAALVRLVA 93


>gi|157377219|ref|YP_001475819.1| hypothetical protein Ssed_4087 [Shewanella sediminis HAW-EB3]
 gi|157319593|gb|ABV38691.1| class I peptide chain release factor [Shewanella sediminis HAW-EB3]
          Length = 142

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 24/110 (21%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIP--------- 256
           + ++  S  + + E++      R+SGAGGQH+N   +A +I      + +P         
Sbjct: 3   FAMIKISNSVSLQENEIEWQFIRSSGAGGQHINKVSTAAQIIFDIKASSLPDFYKQALLK 62

Query: 257 --------TG-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
                   +G V+++CQQ RSQ  N+  A       +  + + ++  IA 
Sbjct: 63  KADHRITKSGKVIIKCQQSRSQDFNRQTALAQFIELIASVAITQKRRIAT 112


>gi|332095133|gb|EGJ00165.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 5216-82]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|209917382|ref|YP_002291466.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SE11]
 gi|209910641|dbj|BAG75715.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|324017841|gb|EGB87060.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 117-3]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 24/96 (25%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I + +  I   RA GAGGQHVN T +A      +R + +P                  
Sbjct: 8   VAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 68  GVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|89900179|ref|YP_522650.1| class I peptide chain release factor [Rhodoferax ferrireducens
           T118]
 gi|89344916|gb|ABD69119.1| Class I peptide chain release factor [Rhodoferax ferrireducens
           T118]
          Length = 141

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 28/91 (30%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTGV--------------- 259
           ++I+E++  +   RA GAGGQ+VN   SA+ +      + +P  V               
Sbjct: 10  LQINEAEVELSAIRAQGAGGQNVNKVSSAIHLRFDIAASSLPQDVKERLLALHDSRITKD 69

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYEL 287
              V++ QQ+R+Q  N+  A      +L+EL
Sbjct: 70  GVLVIKAQQQRTQEMNRLDAL----MRLHEL 96


>gi|283477406|emb|CAY73322.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Erwinia
           pyrifoliae DSM 12163]
          Length = 138

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVR--------------------ITH---IPT 257
           I + +++  +   RA GAGGQHVN + +A+                     ++H    P 
Sbjct: 8   IVVPDAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPDFYQQRMLAVSHHLITPE 67

Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           G V+++ Q+ RSQ  N+  A   L   + EL
Sbjct: 68  GMVIIKAQEYRSQEMNRDAALKRLENLIIEL 98


>gi|15799873|ref|NP_285885.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           EDL933]
 gi|15829447|ref|NP_308220.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. Sakai]
 gi|168752175|ref|ZP_02777197.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168758716|ref|ZP_02783723.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168764945|ref|ZP_02789952.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168769960|ref|ZP_02794967.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168777700|ref|ZP_02802707.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168782085|ref|ZP_02807092.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168789302|ref|ZP_02814309.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC869]
 gi|168802463|ref|ZP_02827470.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC508]
 gi|195939888|ref|ZP_03085270.1| hypothetical protein EscherichcoliO157_26391 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807788|ref|ZP_03250125.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208814264|ref|ZP_03255593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208820681|ref|ZP_03261001.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209397979|ref|YP_002268800.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217326506|ref|ZP_03442590.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254791324|ref|YP_003076161.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|261226946|ref|ZP_05941227.1| hypothetical protein EscherichiacoliO157_20487 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255350|ref|ZP_05947883.1| hypothetical protein EscherichiacoliO157EcO_05914 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|12512922|gb|AAG54493.1|AE005195_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13359649|dbj|BAB33616.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767117|gb|EDU30961.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188013923|gb|EDU52045.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4113]
 gi|189000423|gb|EDU69409.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189354517|gb|EDU72936.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189361069|gb|EDU79488.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189365142|gb|EDU83558.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189371137|gb|EDU89553.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC869]
 gi|189375543|gb|EDU93959.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC508]
 gi|208727589|gb|EDZ77190.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208735541|gb|EDZ84228.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208740804|gb|EDZ88486.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209159379|gb|ACI36812.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209748692|gb|ACI72653.1| hypothetical protein ECs0193 [Escherichia coli]
 gi|209748694|gb|ACI72654.1| hypothetical protein ECs0193 [Escherichia coli]
 gi|209748696|gb|ACI72655.1| hypothetical protein ECs0193 [Escherichia coli]
 gi|217322727|gb|EEC31151.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254590724|gb|ACT70085.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|320190282|gb|EFW64932.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320639998|gb|EFX09583.1| hypothetical protein ECO5101_12093 [Escherichia coli O157:H7 str.
           G5101]
 gi|326339753|gb|EGD63561.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. 1044]
 gi|326345087|gb|EGD68830.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. 1125]
          Length = 136

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 24/96 (25%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I + +  I   RA GAGGQHVN T +A      +R + +P                  
Sbjct: 8   VAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 68  GVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|270264796|ref|ZP_06193060.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
 gi|270041094|gb|EFA14194.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
          Length = 137

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 24/93 (25%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--------------------- 252
           +++ S  + I +++  +   RA GAGGQHVN T +A+ +                     
Sbjct: 1   MLELSRNVAIPDNELELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN 60

Query: 253 THIPTG---VVVQCQQERSQHKNKAQAWNMLRA 282
            H+ T    V+++ Q+ RSQ  N+  A   L A
Sbjct: 61  NHLITADGVVIIKAQEYRSQELNREAALARLVA 93


>gi|82775583|ref|YP_401930.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae Sd197]
 gi|309787129|ref|ZP_07681741.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617]
 gi|81239731|gb|ABB60441.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308924707|gb|EFP70202.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 24/96 (25%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           + I + +  I   RA G GGQHVN T +A      +R + +P                  
Sbjct: 8   VAIPDGELEITAIRAQGVGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASYHLISSD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           GV V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 68  GVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|254227756|ref|ZP_04921187.1| Protein chain release factor B [Vibrio sp. Ex25]
 gi|262395799|ref|YP_003287652.1| class I peptide chain release factor [Vibrio sp. Ex25]
 gi|151939798|gb|EDN58625.1| Protein chain release factor B [Vibrio sp. Ex25]
 gi|262339393|gb|ACY53187.1| class I peptide chain release factor [Vibrio sp. Ex25]
          Length = 137

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 24/99 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIPTG---------------- 258
           + I E + ++   RA G GGQ+VN   SA+      R + +P                  
Sbjct: 8   VTIQEWEIQLSPIRAQGNGGQNVNKVASAIHLRFDIRHSSLPDFYKERLLALSDSRITKD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
             ++++ QQ R+Q +NK  A N L+A +    LQ+++ I
Sbjct: 68  GVIIIKAQQFRTQEQNKEDALNRLQALIKAAALQEKKRI 106


>gi|194439906|ref|ZP_03071968.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1]
 gi|253774781|ref|YP_003037612.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160311|ref|YP_003043419.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B str.
           REL606]
 gi|300932150|ref|ZP_07147433.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1]
 gi|312970293|ref|ZP_07784475.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70]
 gi|194421152|gb|EDX37177.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1]
 gi|242376023|emb|CAQ30706.1| conserved protein [Escherichia coli BL21(DE3)]
 gi|253325825|gb|ACT30427.1| Class I peptide chain release factor [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972212|gb|ACT37883.1| hypothetical protein ECB_00190 [Escherichia coli B str. REL606]
 gi|253976421|gb|ACT42091.1| hypothetical protein ECD_00190 [Escherichia coli BL21(DE3)]
 gi|300460087|gb|EFK23580.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1]
 gi|310337791|gb|EFQ02902.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70]
 gi|323959953|gb|EGB55600.1| RF-1 domain-containing protein [Escherichia coli H489]
 gi|323970671|gb|EGB65927.1| RF-1 domain-containing protein [Escherichia coli TA007]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|82542790|ref|YP_406737.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii Sb227]
 gi|81244201|gb|ABB64909.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|320186614|gb|EFW61339.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri CDC
           796-83]
 gi|332098782|gb|EGJ03742.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 3594-74]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|157157087|ref|YP_001461361.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E24377A]
 gi|157159657|ref|YP_001456975.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|187732441|ref|YP_001878994.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella boydii
           CDC 3083-94]
 gi|188494154|ref|ZP_03001424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638]
 gi|191167036|ref|ZP_03028858.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|193063171|ref|ZP_03044262.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|193067745|ref|ZP_03048712.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019]
 gi|194428309|ref|ZP_03060851.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|194435008|ref|ZP_03067249.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|218552773|ref|YP_002385686.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           IAI1]
 gi|218693657|ref|YP_002401324.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 55989]
 gi|254037611|ref|ZP_04871688.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia sp.
           1_1_43]
 gi|256021624|ref|ZP_05435489.1| peptidyl-tRNA hydrolase domain protein [Shigella sp. D9]
 gi|260853402|ref|YP_003227293.1| hypothetical protein ECO26_0194 [Escherichia coli O26:H11 str.
           11368]
 gi|291281014|ref|YP_003497832.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293476849|ref|ZP_06665257.1| yaeJ protein [Escherichia coli B088]
 gi|300816232|ref|ZP_07096455.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1]
 gi|300824085|ref|ZP_07104205.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7]
 gi|300902011|ref|ZP_07120038.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1]
 gi|300920122|ref|ZP_07136575.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1]
 gi|300923016|ref|ZP_07139083.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1]
 gi|300938601|ref|ZP_07153333.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1]
 gi|301305328|ref|ZP_07211424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1]
 gi|301330006|ref|ZP_07222693.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1]
 gi|307311360|ref|ZP_07591002.1| Class I peptide chain release factor [Escherichia coli W]
 gi|309796369|ref|ZP_07690778.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7]
 gi|331666433|ref|ZP_08367314.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
 gi|331680771|ref|ZP_08381430.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
 gi|332282866|ref|ZP_08395279.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
 gi|157065337|gb|ABV04592.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|157079117|gb|ABV18825.1| putative peptidyl-tRNA hydrolase [Escherichia coli E24377A]
 gi|187429433|gb|ACD08707.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC
           3083-94]
 gi|188489353|gb|EDU64456.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638]
 gi|190902929|gb|EDV62656.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|192931079|gb|EDV83682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|192959157|gb|EDV89593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019]
 gi|194413684|gb|EDX29964.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|194416744|gb|EDX32872.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|218350389|emb|CAU96072.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218359541|emb|CAQ97079.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|226840717|gb|EEH72719.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia sp.
           1_1_43]
 gi|257752051|dbj|BAI23553.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|290760887|gb|ADD54848.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291321302|gb|EFE60744.1| yaeJ protein [Escherichia coli B088]
 gi|300405897|gb|EFJ89435.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1]
 gi|300412856|gb|EFJ96166.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1]
 gi|300420643|gb|EFK03954.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1]
 gi|300456447|gb|EFK19940.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1]
 gi|300523362|gb|EFK44431.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7]
 gi|300531439|gb|EFK52501.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1]
 gi|300839433|gb|EFK67193.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1]
 gi|300843960|gb|EFK71720.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1]
 gi|306908339|gb|EFN38837.1| Class I peptide chain release factor [Escherichia coli W]
 gi|308120073|gb|EFO57335.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7]
 gi|315059410|gb|ADT73737.1| conserved hypothetical protein [Escherichia coli W]
 gi|315254994|gb|EFU34962.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
 gi|320180900|gb|EFW55822.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii ATCC 9905]
 gi|320196931|gb|EFW71552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli WV_060327]
 gi|320200282|gb|EFW74868.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EC4100B]
 gi|320644768|gb|EFX13812.1| hypothetical protein ECO9389_12489 [Escherichia coli O157:H- str.
           493-89]
 gi|320652924|gb|EFX21162.1| hypothetical protein ECO2687_24853 [Escherichia coli O157:H- str. H
           2687]
 gi|320658312|gb|EFX26041.1| hypothetical protein ECO7815_24381 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320663622|gb|EFX30906.1| hypothetical protein ECO5905_24126 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668935|gb|EFX35730.1| hypothetical protein ECOSU61_24498 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323157971|gb|EFZ44073.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EPECa14]
 gi|323160241|gb|EFZ46199.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E128010]
 gi|323170984|gb|EFZ56633.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli LT-68]
 gi|323181700|gb|EFZ67114.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1357]
 gi|323380031|gb|ADX52299.1| Class I peptide chain release factor [Escherichia coli KO11]
 gi|323945669|gb|EGB41718.1| RF-1 domain-containing protein [Escherichia coli H120]
 gi|324118312|gb|EGC12207.1| RF-1 domain-containing protein [Escherichia coli E1167]
 gi|331066644|gb|EGI38521.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
 gi|331072234|gb|EGI43570.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
 gi|332097593|gb|EGJ02570.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae
           155-74]
 gi|332105218|gb|EGJ08564.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|259907565|ref|YP_002647921.1| peptidyl-tRNA hydrolase domain protein [Erwinia pyrifoliae Ep1/96]
 gi|224963187|emb|CAX54671.1| conserved uncharacterized protein YaeJ [Erwinia pyrifoliae Ep1/96]
 gi|310764927|gb|ADP09877.1| peptidyl-tRNA hydrolase domain protein [Erwinia sp. Ejp617]
          Length = 136

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVR--------------------ITH---IPT 257
           I + +++  +   RA GAGGQHVN + +A+                     ++H    P 
Sbjct: 6   IVVPDAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPDFYQQRMLAVSHHLITPE 65

Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           G V+++ Q+ RSQ  N+  A   L   + EL
Sbjct: 66  GMVIIKAQEYRSQEMNRDAALKRLENLIIEL 96


>gi|33593628|ref|NP_881272.1| hypothetical protein BP2658 [Bordetella pertussis Tohama I]
 gi|33595904|ref|NP_883547.1| hypothetical protein BPP1232 [Bordetella parapertussis 12822]
 gi|33597646|ref|NP_885289.1| hypothetical protein BPP3112 [Bordetella parapertussis 12822]
 gi|33602050|ref|NP_889610.1| hypothetical protein BB3074 [Bordetella bronchiseptica RB50]
 gi|33563701|emb|CAE42934.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33565983|emb|CAE36534.1| conserved hypothetical protein [Bordetella parapertussis]
 gi|33574074|emb|CAE38398.1| conserved hypothetical protein [Bordetella parapertussis]
 gi|33576488|emb|CAE33566.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332383033|gb|AEE67880.1| peptidyl-tRNA hydrolase domain protein [Bordetella pertussis CS]
          Length = 138

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 24/78 (30%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTGV----------------- 259
           + E +   D  RA GAGGQ+VN   SA      VR + +P  V                 
Sbjct: 10  LDERELDFDMIRAQGAGGQNVNKVSSAIHLRFDVRASSLPDSVKETVLALADRRISSDGV 69

Query: 260 -VVQCQQERSQHKNKAQA 276
            V++ Q  RSQ KN+A A
Sbjct: 70  IVIKAQTHRSQEKNRADA 87


>gi|260842424|ref|YP_003220202.1| hypothetical protein ECO103_0190 [Escherichia coli O103:H2 str.
           12009]
 gi|257757571|dbj|BAI29068.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|311106692|ref|YP_003979545.1| peptidyl-tRNA hydrolase domain-containing protein [Achromobacter
           xylosoxidans A8]
 gi|310761381|gb|ADP16830.1| peptidyl-tRNA hydrolase domain protein [Achromobacter xylosoxidans
           A8]
          Length = 138

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 26/90 (28%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTG---------- 258
           V DSI ++  E D      RA GAGGQ+VN   SA      VR + +P            
Sbjct: 4   VQDSIYLD--ERDLAFTMIRAQGAGGQNVNKVSSAVHLRFDVRASSLPEEIKEALCALSD 61

Query: 259 --------VVVQCQQERSQHKNKAQAWNML 280
                   +V++ Q  RSQ KN+A+A   L
Sbjct: 62  HRVSKDGVIVIKSQAFRSQEKNRAEAIERL 91


>gi|110640411|ref|YP_668139.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 536]
 gi|191172758|ref|ZP_03034295.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300990439|ref|ZP_07179207.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1]
 gi|110342003|gb|ABG68240.1| peptidyl-tRNA hydrolase [Escherichia coli 536]
 gi|190906908|gb|EDV66510.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|254966722|gb|ACT97354.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
           AM_gF3SD01_02]
 gi|254966729|gb|ACT97359.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
           AM_gF3SD01_04]
 gi|254966742|gb|ACT97368.1| hypothetical protein [mixed culture bacterium AM_gF3SD01_08]
 gi|300305739|gb|EFJ60259.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1]
 gi|324014123|gb|EGB83342.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 60-1]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|322831612|ref|YP_004211639.1| Class I peptide chain release factor [Rahnella sp. Y9602]
 gi|321166813|gb|ADW72512.1| Class I peptide chain release factor [Rahnella sp. Y9602]
          Length = 136

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-IPTGVVVQCQQER----SQHKN 272
           S ++EI +S+  +   RA G GGQ+VN T +A+ +   I    + +  +ER    + H  
Sbjct: 5   SGKLEIPDSEIELTAIRAQGNGGQNVNKTSTAIHLRFDIKASSLPEYYKERLLAFNHHSV 64

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIG 299
            A  W +++A+ Y  +   RE  +A +G
Sbjct: 65  TADGWVIIKAQEYRSQEMNREAALARLG 92


>gi|209901303|ref|YP_002290942.1| hypothetical protein phiCD27_gp66 [Clostridium phage phiCD27]
 gi|199612184|gb|ACH91357.1| hypothetical protein [Clostridium phage phiCD27]
          Length = 113

 Score = 37.0 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           + D +V +THIPTG+ V+C+   S  KNK +   +L  +L ++
Sbjct: 61  SKDYSVEVTHIPTGITVKCRSTNSILKNKNKCLEILEEELIKI 103


>gi|24111627|ref|NP_706137.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
           301]
 gi|30061748|ref|NP_835919.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
           2457T]
 gi|110804243|ref|YP_687763.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella
           flexneri 5 str. 8401]
 gi|24050398|gb|AAN41844.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30039990|gb|AAP15724.1| hypothetical protein S0184 [Shigella flexneri 2a str. 2457T]
 gi|110613791|gb|ABF02458.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|281599547|gb|ADA72531.1| Peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2002017]
 gi|313646747|gb|EFS11206.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
           2457T]
 gi|332762021|gb|EGJ92292.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2747-71]
 gi|332762196|gb|EGJ92465.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 4343-70]
 gi|332765041|gb|EGJ95269.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-671]
 gi|332768695|gb|EGJ98875.1| putative-tRNA hydrolase domain protein [Shigella flexneri 2930-71]
 gi|333009346|gb|EGK28802.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-218]
 gi|333022233|gb|EGK41472.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-304]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 24/94 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287
              GV V++ Q+ RSQ  N+  A   L A + +L
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDL 98


>gi|170021455|ref|YP_001726409.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli ATCC 8739]
 gi|169756383|gb|ACA79082.1| Class I peptide chain release factor [Escherichia coli ATCC 8739]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|157371995|ref|YP_001479984.1| peptidyl-tRNA hydrolase domain-containing protein [Serratia
           proteamaculans 568]
 gi|157323759|gb|ABV42856.1| Class I peptide chain release factor [Serratia proteamaculans 568]
          Length = 137

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 24/91 (26%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--------------------- 252
           +++ S  + I +++  +   RA GAGGQHVN T +A+ +                     
Sbjct: 1   MLELSRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN 60

Query: 253 THIPTG---VVVQCQQERSQHKNKAQAWNML 280
            H+ T    V+++ Q+ RSQ  N+  A   L
Sbjct: 61  NHLITADGVVIIKAQEYRSQELNREAALARL 91


>gi|317047005|ref|YP_004114653.1| Class I peptide chain release factor [Pantoea sp. At-9b]
 gi|316948622|gb|ADU68097.1| Class I peptide chain release factor [Pantoea sp. At-9b]
          Length = 136

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 24/87 (27%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + + E++  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRSVSLPENEVELSAIRAQGAGGQHVNKTSTAIHLRFDINASSLPPFYKERLLGARHHLI 64

Query: 257 T--GVV-VQCQQERSQHKNKAQAWNML 280
           T  GVV ++ Q+ RSQ  N+  A   L
Sbjct: 65  TEDGVVIIKAQEYRSQEMNREAALQRL 91


>gi|205351577|ref|YP_002225378.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205271358|emb|CAR36151.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326626604|gb|EGE32947.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           + I++++  I   RA GAGGQHVN T SA+ +
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHL 39


>gi|259418312|ref|ZP_05742230.1| putative peptide chain release factor H [Silicibacter sp.
           TrichCH4B]
 gi|259345707|gb|EEW57551.1| putative peptide chain release factor H [Silicibacter sp.
           TrichCH4B]
          Length = 211

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 5/112 (4%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G  SA +++ G  A       +GV      S      +R   F  I+  P     + ++ 
Sbjct: 50  GPSSAVVILSGTQASALALSVEGVILWRCQSELRPKHKRKNWFVQIFRLPTTTKVVSVD- 108

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHI-PTGVV--VQCQQERSQHKN 272
             +   +   RA G GGQH N T SA+R   + P   V  V  +  RSQH+N
Sbjct: 109 -PASVEMQAIRAGGPGGQHQNKTSSAIRARWVSPHKQVYSVVVRDSRSQHQN 159


>gi|218698859|ref|YP_002406488.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           IAI39]
 gi|218368845|emb|CAR16594.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 140

 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|288958700|ref|YP_003449041.1| hypothetical protein AZL_018590 [Azospirillum sp. B510]
 gi|288911008|dbj|BAI72497.1| hypothetical protein AZL_018590 [Azospirillum sp. B510]
          Length = 140

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I + ES+ + +  RASG GGQHVN T++AV++
Sbjct: 8   ISLDESELQEEFVRASGPGGQHVNKTETAVQL 39


>gi|170578563|ref|XP_001894460.1| peptide chain release factor 2, programmed [Brugia malayi]
 gi|170584020|ref|XP_001896825.1| peptide chain release factor 2, programmed [Brugia malayi]
 gi|158595842|gb|EDP34329.1| peptide chain release factor 2, programmed, putative [Brugia
           malayi]
 gi|158598945|gb|EDP36701.1| peptide chain release factor 2, programmed, putative [Brugia
           malayi]
          Length = 93

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++E   + N I    +++    D + L++  ++E+D     E  + L + +  V+ K+ 
Sbjct: 10  ILKEYSKIKNDIESFSKLESDYNDAISLMKSTIDENDEEFFSEIENELLKSEKLVKRKET 69

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQD 132
             L +  AD+     E+H+G GGTES D
Sbjct: 70  NFLFTDGADNT----EIHSGVGGTESDD 93


>gi|26246139|ref|NP_752178.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli CFT073]
 gi|218688067|ref|YP_002396279.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           ED1a]
 gi|227884895|ref|ZP_04002700.1| Trna hydrolase domain protein [Escherichia coli 83972]
 gi|300993587|ref|ZP_07180443.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1]
 gi|301049894|ref|ZP_07196820.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1]
 gi|306815209|ref|ZP_07449358.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101]
 gi|331645335|ref|ZP_08346446.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
 gi|331681577|ref|ZP_08382214.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
 gi|26106536|gb|AAN78722.1|AE016755_222 Hypothetical protein yaeJ [Escherichia coli CFT073]
 gi|218425631|emb|CAR06417.1| conserved hypothetical protein [Escherichia coli ED1a]
 gi|222032022|emb|CAP74761.1| Uncharacterized protein yaeJ [Escherichia coli LF82]
 gi|227838033|gb|EEJ48499.1| Trna hydrolase domain protein [Escherichia coli 83972]
 gi|254966714|gb|ACT97348.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
           AM_gF1DD01_14]
 gi|281177417|dbj|BAI53747.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300298347|gb|EFJ54732.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1]
 gi|300406510|gb|EFJ90048.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1]
 gi|305850871|gb|EFM51326.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101]
 gi|307552042|gb|ADN44817.1| peptidyl-tRNA hydrolase [Escherichia coli ABU 83972]
 gi|312944800|gb|ADR25627.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315294596|gb|EFU53943.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 153-1]
 gi|315300664|gb|EFU59891.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 16-3]
 gi|330910042|gb|EGH38552.1| YaeJ-like protein [Escherichia coli AA86]
 gi|331046092|gb|EGI18211.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
 gi|331081798|gb|EGI52959.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
          Length = 140

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|295098680|emb|CBK87770.1| Protein chain release factor B [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 138

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 24/91 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIP-----------------T 257
           + I +++  I   RA GAGGQHVN   +A      +R + +P                  
Sbjct: 8   VSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKESLLAASHHLITSE 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           GV V++ Q+ RSQ  N+  A   L A + EL
Sbjct: 68  GVMVIKAQEYRSQELNREAAIARLVAVIKEL 98


>gi|254966702|gb|ACT97339.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
           bacterium AM_gF1DD01_09]
          Length = 140

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I +++  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDNEYEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV V++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|311743919|ref|ZP_07717725.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
 gi|311313049|gb|EFQ82960.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
          Length = 135

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 28/78 (35%)

Query: 234 RASGAGGQHVNTTDSAV------------------------RITHIPTGVVVQCQQERSQ 269
           R+SGAGGQHVNTTD+ V                        R   +   + V   Q RSQ
Sbjct: 17  RSSGAGGQHVNTTDTRVELLWDLRATTALSAAQRDRAADVLRSRLVDGTITVVSSQYRSQ 76

Query: 270 HKNKAQAWNMLRAKLYEL 287
           H+N+  A    RA+L +L
Sbjct: 77  HRNREAA----RARLEDL 90


>gi|320173327|gb|EFW48530.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae CDC
           74-1112]
          Length = 120

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I + +  I   RA GAGGQHVN T +A      +R + +P               
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 258 ---GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
              GV+ ++ Q+ RSQ  N+  A   L A + +L  +++
Sbjct: 65  SSDGVIAIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103


>gi|311280839|ref|YP_003943070.1| Class I peptide chain release factor [Enterobacter cloacae SCF1]
 gi|308750034|gb|ADO49786.1| Class I peptide chain release factor [Enterobacter cloacae SCF1]
          Length = 140

 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIP-----------------T 257
           + +++ +  I   RA GAGGQHVN T +A      +R + +P                  
Sbjct: 8   VVLADDEVEITAVRAQGAGGQHVNKTSTAIHLRFDIRASSLPEEYKTRLLAASHHLISAE 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSK 303
           GV +++ Q+ RSQ  N+  A   L + +  L  +QKR +     ++SK
Sbjct: 68  GVIIIKAQEYRSQEMNREAALARLVSVIQTLTVVQKRRKATRPTKASK 115


>gi|293408284|ref|ZP_06652124.1| yaeJ protein [Escherichia coli B354]
 gi|291472535|gb|EFF15017.1| yaeJ protein [Escherichia coli B354]
          Length = 140

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 24/96 (25%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257
           I I + +  I   RA GAGGQHVN T +A      +R + +P                  
Sbjct: 8   IAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67

Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           GV V++ Q+ R+Q  N+  A   L A + +L  +++
Sbjct: 68  GVIVIKAQEYRNQELNREAALARLVAVIKDLTTEQK 103


>gi|289806047|ref|ZP_06536676.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 41

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SYVL   + +KDLRT +E  +   VLDG LD F++A+L
Sbjct: 1   SYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 37


>gi|119509957|ref|ZP_01629099.1| hypothetical protein N9414_05739 [Nodularia spumigena CCY9414]
 gi|119465423|gb|EAW46318.1| hypothetical protein N9414_05739 [Nodularia spumigena CCY9414]
          Length = 137

 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 24/88 (27%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT-------------- 257
           S +I I +S+  +   R+ GAGGQ+VN   +A+ +      + +P               
Sbjct: 5   SRKIMIPDSEIEMSAIRSQGAGGQNVNKVSTAIHLRFDIEASSLPAFYKEQLMKLNDRRI 64

Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLR 281
              GV V++ Q+ RSQ KN+ +A   L+
Sbjct: 65  TQEGVIVIKAQEYRSQEKNREEALQRLK 92


>gi|237811675|ref|YP_002896126.1| class I peptide chain release factor [Burkholderia pseudomallei
           MSHR346]
 gi|237504180|gb|ACQ96498.1| class I peptide chain release factor [Burkholderia pseudomallei
           MSHR346]
          Length = 134

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 37/132 (28%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTGV------------ 259
           ++    S+ +  +   RA GAGGQ+VN   SA      +R + +P  V            
Sbjct: 2   TLRYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRI 61

Query: 260 ------VVQCQQERSQHKNKAQAWNML-------------RAKLYELELQKREEIANIGE 300
                 V++ Q+ R+Q KN+A A   L             R         K   +A  G 
Sbjct: 62  TREGVIVIKAQEYRTQEKNRAVALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGR 121

Query: 301 SSKTEIGWGRQI 312
            S+ + G GR +
Sbjct: 122 RSEVKSGRGRVV 133


>gi|157960364|ref|YP_001500398.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157845364|gb|ABV85863.1| Class I peptide chain release factor [Shewanella pealeana ATCC
           700345]
          Length = 140

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 26/107 (24%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIP------------ 256
           + +S+ I+ SE + +    R+SGAGGQH+N   +A      ++ + +P            
Sbjct: 6   ISNSVSIQDSELEWQF--IRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLAKAD 63

Query: 257 -----TG-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
                +G ++++CQQ RSQ  N+  A     A +  +   +++ IA 
Sbjct: 64  HRITKSGKIIIKCQQSRSQDFNRQTALEQFIALVASVNAVQKKRIAT 110


>gi|148253239|ref|YP_001237824.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium
           sp. BTAi1]
 gi|146405412|gb|ABQ33918.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. BTAi1]
          Length = 139

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 26/94 (27%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAV-------RITHIP-------------- 256
           S ++ I E+D  I   RASG GGQ+VN   ++        RIT +P              
Sbjct: 5   SRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAARLARLAGQR 63

Query: 257 ---TGV-VVQCQQERSQHKNKAQAWNMLRAKLYE 286
               GV V+Q ++ R+Q +NKA A   L   L E
Sbjct: 64  MTKNGVIVIQAERFRTQERNKADAIERLVTLLRE 97


Searching..................................................done


Results from round 2




>gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 355

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 355/355 (100%), Positives = 355/355 (100%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK
Sbjct: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE
Sbjct: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW
Sbjct: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG
Sbjct: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE
Sbjct: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK
Sbjct: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355


>gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 354

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 296/349 (84%), Positives = 329/349 (94%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NCLGGLFDWDNA++RL FLN K E+P+LW+ V EAK+LMRERQHLDNA+S +K +QDRL
Sbjct: 1   MNCLGGLFDWDNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            DN+ LL+LA+EE++ S+LQE+ DNL+++KL+ EYKQFESL SGEADSND YLEVHAGAG
Sbjct: 61  DDNIALLDLAVEENNSSVLQESLDNLKQLKLDTEYKQFESLFSGEADSNDVYLEVHAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWANML+RMY RW+E+RKFK + LE+HDGEEAGIKSATLLIKGPNAYGWLK EQG
Sbjct: 121 GTESQDWANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISPYDSNSRRHTSFSS+WVYPVVD+SIEIEI+ESDCRIDTYRASGAGGQHVNTT
Sbjct: 181 VHRLVRISPYDSNSRRHTSFSSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY+LELQKREEIANIGESSKTEI
Sbjct: 241 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           GWGRQIRSYVLQPYQMVKDLRTNIEK+SP DVL+GDLDDFMKA LA+KK
Sbjct: 301 GWGRQIRSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALALKK 349


>gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
 gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
          Length = 366

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++LN   G  D +    R++ L     DP  W N   A+ ++ E   L   +   +E+
Sbjct: 13  MAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMVDTYREL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +  EL  EE D  +  +    ++ +  +    + + LLS   D N+A LE+H
Sbjct: 73  EAEQEDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY RWA+ + FK E L+   G+EAG+KS TL+I G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EIEIS    +IDTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIEISPDQLKIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PT  VV CQ ERSQ KN+ QA  ML+AKL++LE++++++  +     
Sbjct: 253 INTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQELDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +++IGWG QIRSYV  PY MVKD RTN E  +   V+DG+LD F+ A L  K
Sbjct: 313 QSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRSK 364


>gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 364

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 183/347 (52%), Positives = 248/347 (71%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W +  +A+ L +ER  L+  +  IK ++  L
Sbjct: 17  LLCFGGIFDFDAKVERLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQGL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+G
Sbjct: 77  EDVEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 137 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSF++++VYP +DD+I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 197 IHRLVRKSPFDSNNRRHTSFAAVFVYPEIDDNIDIEINPADLRIDVYRASGAGGQHVNKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 257 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 317 GWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 362


>gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
 gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis E264]
          Length = 459

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 252/350 (72%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L+  ++ + E+
Sbjct: 108 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEGVVTTLTEL 167

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA EE+D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 168 DNDLRDAQDLFDLAREENDEDTLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 227

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 228 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGDYAYGYLR 287

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 288 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 347

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 348 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 407

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 408 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 456


>gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD]
 gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           ambifaria AMMD]
          Length = 406

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 179/345 (51%), Positives = 250/345 (72%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 60  ASFGGIFDYDAKSARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 119

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + D+ ++++  V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 120 DALDLFELAREEGDEDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 179

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 180 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 239

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TD
Sbjct: 240 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTD 299

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  ESSKT++G
Sbjct: 300 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVG 359

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 360 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 403


>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
 gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
          Length = 373

 Score =  404 bits (1039), Expect = e-111,   Method: Composition-based stats.
 Identities = 183/353 (51%), Positives = 244/353 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  +   + G FD D   +RLS +  +   P  W +  +A+ L  ER HL+  +   K 
Sbjct: 14  KLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQELEAFKS 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D+ +L+E+A EE D S+L E    L  +   ++  + + +LSGE D N+A + +
Sbjct: 74  VEQKIEDSEVLIEMAEEEQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFDKNNAIVTI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA ML+RMY RWAE++ F+ E L++ + EEAGIKSATLLIKGP AYG+L
Sbjct: 134 HAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGPYAYGFL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G HRLVRISP+D+N+RRHTSF  + V P +D+ IE+EI E D RIDTYRASGAGGQ
Sbjct: 194 RAEHGTHRLVRISPFDANARRHTSFCGVIVVPEIDEDIEVEIKEEDLRIDTYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +N+ +A  +L+A+LYELE QKREE       
Sbjct: 254 HVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAQARG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSY+ QPY++VKD RT +E ++   V+DGD+D F++A L  K
Sbjct: 314 EHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQK 366


>gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72]
          Length = 349

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 185/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD ++  +RL  +N + E+P +W N   A  + +E+  LD  +  I  +  +L 
Sbjct: 3   KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +LELA+E+DD S+L +    L      VE  +F  + SGE D+N+ YL++ +G+GG
Sbjct: 63  DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT+++KG  A+GWL+ E GV
Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+ RHTSF++++V P +DD+I I+I+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIGIDINPADLRIDTYRSSGAGGQHVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QKR E     E SK++IG
Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E ++ + VL+GDLD F++A+L  
Sbjct: 303 WGSQIRSYVLDDS-RIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347


>gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5]
 gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           cryohalolentis K5]
          Length = 349

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 186/343 (54%), Positives = 241/343 (70%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E+P LW +   A  + +E+  LD  I  +  ++  L D  
Sbjct: 6   GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LELA+E +D S+L +    L   +  V   +F  + SGE D N+ YL++ +G+GGTE+
Sbjct: 66  AMLELAVEAEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE   FK E +E+  G  AGIKSAT+ IKG  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVV CQ ERSQH NKA A  MLRAKLYELE+QKR E     E  K+++GWG 
Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 306 QIRSYVLDDS-RIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347


>gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383]
 gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp.
           383]
          Length = 391

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 179/345 (51%), Positives = 249/345 (72%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 45  ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + ++  ++   V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 105 DALDLFELAREEGDEDTLVASEEDAAKLASRVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGI 224

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++G
Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 345 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 388


>gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4]
 gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           arcticus 273-4]
          Length = 349

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 185/343 (53%), Positives = 242/343 (70%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E+P LW +   A  + +E+  LD  I  +  ++  L D  
Sbjct: 6   GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LELA+EE+D S+L +    L   +  V   +F  + SGE D N+ YL++ +G+GGTE+
Sbjct: 66  AMLELAVEEEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE   FK + +E+  G  AGIKSAT+ IKG  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+ RHTSF++++V P +DD+IEI+++ +D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVV CQ ERSQH NKA A  MLRAKLYELE+QKR E     E  K+++GWG 
Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 306 QIRSYVLDDS-RIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347


>gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
 gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
          Length = 391

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 180/345 (52%), Positives = 250/345 (72%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 45  ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + D+  +++  V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++G
Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 345 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 388


>gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054]
 gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424]
 gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia AU 1054]
 gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia HI2424]
          Length = 391

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 180/345 (52%), Positives = 250/345 (72%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 45  ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + D+  +++  V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++G
Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 345 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 388


>gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103]
 gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103]
          Length = 430

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 178/344 (51%), Positives = 236/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +    ++   L D 
Sbjct: 86  FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDV 145

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL+LA+E DD     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 146 QGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 205

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 206 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 265

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 266 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 325

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K++IGWG
Sbjct: 326 VRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWG 385

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 386 SQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 428


>gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1]
 gi|226739127|sp|B7LYF5|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1]
          Length = 365

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
 gi|238693208|sp|B4F0M7|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
          Length = 365

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 185/352 (52%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ +   L G  D+D   +RL  +N + E P +W    +A+ L +ER  L+  +  I +
Sbjct: 13  EVAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQ 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LL+LA+E DD     E    L+ +  ++E  +F  + SGE DS D YL++
Sbjct: 73  LEQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  AYGWL
Sbjct: 133 QAGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E 
Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 313 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli]
          Length = 365

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 183/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRVVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
 gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
          Length = 351

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 247/344 (71%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+DN V+RL  ++ + E P +W +  +A+ L +ER  L+  ++ IK +Q  L D 
Sbjct: 7   LGGIFDFDNKVERLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD +   E    L +++  +   +F  + SG  D+ D Y+++ AG+GGTE
Sbjct: 67  DGLLELAIEADDQATFDEAVAELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FK E +E+ DG+ AGIKSAT+ + G  A+GWL+ E G+HR
Sbjct: 127 AQDWTEMLLRMYLRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSFS+++VYP ++D I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSNNRRHTSFSAVFVYPEINDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQHKNK QA   L+AKLYELEL+K+       E SK++IGWG
Sbjct: 247 VRITHMPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 357

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 237/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + +++  L D 
Sbjct: 13  LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDV 72

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE
Sbjct: 73  SGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 132

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHR
Sbjct: 133 AQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 192

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 193 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 252

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 253 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 313 SQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 355


>gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069]
 gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella
           koreensis DSM 16069]
          Length = 365

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 258/351 (73%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++  L G  D+D+  +RL  +  + E P +W +   A+ L +ER  L+  ++ IK++
Sbjct: 14  MSERVTTLRGYLDFDSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + DN  LLEL++EEDD   + E  + ++++   +E  +F  + SGE D N+AYL++ 
Sbjct: 74  EAGIDDNQELLELSVEEDDAESVAEIENEVKQLNTSLEKLEFRRMFSGEMDENNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA++LLRMY RW E R FK E  E  DG+ AGIKSAT+ ++G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI+IE++ +D R+DTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+R+THIPTG+VVQCQ +RSQHKN+AQA +M++AKLYELE+QK+ E     E +
Sbjct: 254 VNKTDSAIRLTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT  E ++ + VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVL-DQSRIKDLRTGHESSNTTAVLDGDLDSFIEASLKA 363


>gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. W3110]
 gi|170082452|ref|YP_001731772.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238902016|ref|YP_002927812.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|2507293|sp|P07012|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576667|sp|B1XEH8|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|259585244|sp|C5A0G3|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12
           substr. W3110]
 gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1]
 gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1]
 gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2
          Length = 365

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum
           SCRI1043]
 gi|81646129|sp|Q6D946|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium
           atrosepticum SCRI1043]
          Length = 365

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LAERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     ETS  L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVTGLLELAVEEDDEDTFNETSAELDVLENKLGQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQVMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|319768218|ref|YP_004133719.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
 gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
          Length = 367

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 238/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +   P+ W +   A+ ++ E   L + +     
Sbjct: 13  KMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLVEEFSS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  +  E  +  +++  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFDNLEVTYELLKEEPDDELQAELVEEAKKLMKDFSEFELQLLLNEPYDQNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAGIKS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD+IEIEI   + +IDTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++        
Sbjct: 253 HVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 365


>gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073]
 gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739]
 gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469]
 gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88]
 gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a]
 gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989]
 gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39]
 gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026]
 gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|260857014|ref|YP_003230905.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|54039052|sp|P66024|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54039053|sp|P66025|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041596|sp|P66023|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040000|sp|B1ITB1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739125|sp|B7MM78|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739126|sp|B7NW32|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739128|sp|B7N7D5|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739129|sp|B1LR73|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739130|sp|B7LPA4|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790914|sp|B7UHU0|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790915|sp|B7LF76|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790916|sp|B7MZI9|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073]
 gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T]
 gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739]
 gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989]
 gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC
           35469]
 gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88]
 gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39]
 gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a]
 gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026]
 gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC
           H10407]
 gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)]
 gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11]
          Length = 365

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
 gi|238690157|sp|B4RCR3|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
          Length = 369

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 212/351 (60%), Positives = 258/351 (73%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S + NC GG+FDW+ A+++L  LN + EDP LW +  EA+ + RER  L   +  +  ++
Sbjct: 10  SSRSNCSGGVFDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLE 69

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D L   ELA EE D + L E    L+ IK      + E+LLSGEAD NDAY+E+++
Sbjct: 70  RDLADALGYAELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINS 129

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA MLLRMYTRWA+      + +E   GE+AGIKS TL +KG NAYGWLK 
Sbjct: 130 GAGGTESNDWAGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKT 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD+IEIEI+ +D R DTYRASGAGGQHV
Sbjct: 190 EAGVHRLVRISPYDSSARRHTSFASVWVYPVIDDNIEIEINPADVRTDTYRASGAGGQHV 249

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVR+THIPTG+ V CQ +RSQH+N+ QAW MLRA+LYELEL+KRE      E  K
Sbjct: 250 NKTDSAVRLTHIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK 309

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 310 TDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAQR 360


>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 368

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 177/353 (50%), Positives = 241/353 (68%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  +L  L    D DN + R+  L  ++  P+ W N   A  + +E+  L + I   ++
Sbjct: 15  NLQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTIDNWQQ 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D   D  +LLELA+ E+D    QE S  L  ++  +   + E + +GE D+++A L +
Sbjct: 75  VIDSFEDAEVLLELAIAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHDASNAMLTI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW ++LLRMY RWAEK+ F TE L+   G+EAG KS T+L+KG  AYG+L
Sbjct: 135 HAGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVKGRWAYGYL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G+HRLVRISP+D+  RRHTSF+S++++P +DD+IE+EI++ D RIDTYRASGAGGQ
Sbjct: 195 RSEMGIHRLVRISPFDTGGRRHTSFASVFIFPELDDNIEVEINDKDLRIDTYRASGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SA+RITH+P+G+VVQCQ ERSQH+NK  A  ML+A+LYE E   R+E       
Sbjct: 255 HVNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K EI WG QIRSYVLQPY++VKD RTN E  +  +VLDGDLD F+ + L  +
Sbjct: 315 DKKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYLLWQ 367


>gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
 gi|225202976|gb|EEG85330.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
          Length = 347

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 186/343 (54%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   L D  
Sbjct: 4   GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     E    L  +  ++E  +F  + SGE DS D YL++ AG+GGTE+
Sbjct: 64  GLLELAVEADDEETFNEAIAELDVLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 124 QDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS ++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 184 VRKSPFDSGGRRHTSFSSAFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K++IGWG 
Sbjct: 244 RITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 QIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345


>gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585229|sp|C6D8Z5|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 365

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T+  L  ++ ++   +F  + SG+ DS D YL++ 
Sbjct: 74  TQGLEDVAGLLELAVEEDDEDTFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
 gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
          Length = 349

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 178/346 (51%), Positives = 241/346 (69%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD +   +RL  +N + E+P LW +   A  + +E+  LDN I  I  + D+L 
Sbjct: 3   TSFGGIFDIEAKQERLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLE 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +++LA+E DD ++L +    L   + +V   +F+ + SGE D N+ Y+++ +G+GG
Sbjct: 63  DAKAMIDLAVEADDATLLADVQAELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY RW E   FK E +E+  G  AGIKSA++ +KG  A+GWL+ E GV
Sbjct: 123 TEAQDWAEMLLRMYLRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTG+VV CQ ERSQH NK  A  MLRAKLYE E+ +R E     E +K++IG
Sbjct: 243 SAVRITHQPTGIVVACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 303 WGSQIRSYVLDDS-RIKDLRTGVETSNTQAVLDGDLDKFIEASLKA 347


>gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome
          Length = 365

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYE+E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 364

 Score =  398 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 186/350 (53%), Positives = 248/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L G  D+D   +RL  ++ + EDP++W N  +A+ L RER  L+  +  I  +
Sbjct: 13  LQGRVDALRGYLDYDAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A EEDD   +     +L   + +V   +F  + SGE D N+AY+++ 
Sbjct: 73  DKALGDTRDLLDMAAEEDDAETVSAVEADLANYENDVAQLEFRRMFSGEMDENNAYMDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RW E+R FKTE +E+ +GE AGIKSAT+  +GP AYGWL+
Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF++++V P VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFAAVFVSPEVDDSIEIEINPADLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH+P+GVVV CQ +RSQHKN+  A   L+AKLYELELQK+       E +
Sbjct: 253 VNRTESAIRITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 KSDIGWGSQIRSYVL-DQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361


>gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
 gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
          Length = 368

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 240/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L+ +G   +     ++++ L  K  +P  W +  +A+ + +E   +  ++   K 
Sbjct: 11  ELKTKLDQMGESLEVPAKEEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L E+ +EE D S+ ++    L  +   +E  Q E LLSG  D+N+A L +
Sbjct: 71  LVAKFEDAQTLWEMGMEEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+L
Sbjct: 131 HAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G+HRLVRISP+D+ +RRHTSF++  + P +DD++E+ I+ SD R+DTYRASGAGGQ
Sbjct: 191 RSEKGIHRLVRISPFDAQARRHTSFAACDIMPEIDDNVEVNINMSDVRVDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q   MLRAKL+ELE++K+E      E 
Sbjct: 251 HINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKLEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +I WG QIRSYV QPY MVKD RTN+E  +   V+DGD+D F++A LA K
Sbjct: 311 DQQKIEWGSQIRSYVFQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363


>gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060]
 gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 375

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 229/351 (65%), Positives = 279/351 (79%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + +  L    DWD A +RL+ LN ++EDP LW +   A+ +MRER  L+ A+S I+ ++
Sbjct: 13  KQSIGLLRRHLDWDTADKRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRRLE 72

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   L+EL   E D + ++E  + ++ ++ E   +Q E+LL+GEAD ND YLEVHA
Sbjct: 73  QGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIETLLAGEADGNDTYLEVHA 132

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWANML RMY RWAE+RK+K E +E  +GEEAGIK ATLLIKG NAYGWLK 
Sbjct: 133 GAGGTESQDWANMLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWLKT 192

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD I IE+ ESDCRIDTYR+SGAGGQHV
Sbjct: 193 ESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRITIEVKESDCRIDTYRSSGAGGQHV 252

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITHIPTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE AN   +SK
Sbjct: 253 NTTDSAVRITHIPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAEAASK 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T+IGWG QIRSYVLQPYQ+VKDLRT  + TSP DVLDG++D F++A+LA +
Sbjct: 313 TDIGWGHQIRSYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLAQR 363


>gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160]
 gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160]
          Length = 384

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 177/345 (51%), Positives = 247/345 (71%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D+   RL  +N + EDP +W +   A+ L +E++ LD+ +  +  I + + 
Sbjct: 38  TTYGGIFDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVN 97

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGG
Sbjct: 98  DAQDLFEMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGG 157

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIK+AT+ I+G  AYG+L+ E GV
Sbjct: 158 TEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGV 217

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 218 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 277

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++G
Sbjct: 278 SAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVG 337

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 338 WGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 381


>gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
 gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
          Length = 417

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 180/345 (52%), Positives = 249/345 (72%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D+   RL  +N + EDP +W +   A+ L RE++ LD+ +  +  + + L 
Sbjct: 71  TRYGGIFDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLR 130

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L ++A EEDD   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGG
Sbjct: 131 DAQDLFDMAREEDDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGG 190

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GV
Sbjct: 191 TEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGV 250

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 251 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTD 310

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ KT++G
Sbjct: 311 SAVRITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVG 370

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 371 WGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 414


>gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
 gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
          Length = 430

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/345 (53%), Positives = 242/345 (70%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL+ +N + EDP +W     A+ L RER  L   +  + E+   L 
Sbjct: 84  KLFGGIFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLA 143

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   LL++A+EEDD   + +    L R++  +   +F  + S E D N+AYL++ AG+GG
Sbjct: 144 DCRDLLDMAVEEDDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGG 203

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GV
Sbjct: 204 TEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGV 263

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 264 HRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 323

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IG
Sbjct: 324 SAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIG 383

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTNIE++    VLDGD+D++++A+L 
Sbjct: 384 WGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 427


>gi|311278189|ref|YP_003940420.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
 gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
          Length = 365

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIP+G+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 357

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/347 (48%), Positives = 220/347 (63%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG FD D   + +     +  +P  W +   A+ ++ E   L       K++ D + 
Sbjct: 4   TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D  +  EL  EE D  +  E   + Q  + +++  +   LL G  D N+A LE+H GAGG
Sbjct: 64  DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW  MLLRMYTRWA    FK E ++   G+EAGIKS TLLI G NAYG+L+ E+GV
Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+  RRHTSF+S+ V P +DD+++++I   D +ID YRASGAGGQHVN T 
Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q +RSQ +N+  A NMLRAKLYE E +K+ +     +  + +IG
Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RTN E      V+DGDLD FM A L  K
Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350


>gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 368

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 180/352 (51%), Positives = 239/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  +G   D     ++++ L  K  +P  W N  EA+ + +E   +  ++   KEI
Sbjct: 12  MQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   LLE+ALEE+D S+  E     + IK  V   + E LLSG  D+N+A L +H
Sbjct: 72  VSKTDDAQALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F     ++  G+EAG+KSATL I G NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DSN+RRHTSFS+  + P +DD++E+ I+ +D R+DTYRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSNARRHTSFSACDIMPEIDDAVEVAINMADVRVDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q   MLRAKL+ELE +K+E      E  
Sbjct: 252 INKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RT +E  +   V+DGDLD F++A LA K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 363


>gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
 gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
          Length = 354

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 172/346 (49%), Positives = 225/346 (65%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD+D   + +S    K  +P  W +   A+ ++ E   L         +   L D
Sbjct: 2   ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             + LEL  E+ D  +  E      ++K +++  Q   LL+G+ D N+A LE+H GAGGT
Sbjct: 62  LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +MLLRMYTRWAE   FK + L+   GE AGI S ++LI G NAYG+L+ E+GVH
Sbjct: 122 EAQDWGSMLLRMYTRWAESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF+S+ V P +DD + I+IS  + ++D YRASGAGGQHVN T S
Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+VV  Q +RSQ +N+  A NML++KLYELE QK+ E     E  + +IGW
Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L  +
Sbjct: 302 GSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347


>gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli]
          Length = 365

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 235/351 (66%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRXVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK Q    ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163]
 gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163]
          Length = 365

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     ETS  L  ++ ++   +F  + SG+ DS D YL++ 
Sbjct: 74  AQGLEDVAGLLELAVEEDDEDTFNETSLELDVLENKLGQLEFRRMFSGQYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|6174964|sp|P28367|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis]
 gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis]
 gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 366

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 173/353 (49%), Positives = 232/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            ++ +L    G  D ++   R++ L+ +  DP  W +  +A+ ++ E   L + ++  K+
Sbjct: 12  NMASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  +  +L  EE D  +  E    L+ +  E    + + LLS   D N+A LE+
Sbjct: 72  LNESHEELQMTHDLLKEEPDTDLQLELEKELKSLTKEFNEFELQLLLSEPYDKNNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRW E+R FK E L+   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D I+I+I   D ++DTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT VVV CQ ERSQ KN+ +A  ML+AKLY+  +++++   +    
Sbjct: 252 HVNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSK 364


>gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
 gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
          Length = 358

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 167/348 (47%), Positives = 234/348 (67%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +   LGGLFD D   + ++   +K  DP  W N  EA+ ++ E   L N      ++++ 
Sbjct: 3   RSRTLGGLFDLDGLQEAIADNESKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEA 62

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D  +LLE+  E+DD  ++ E S+  +  + +++  Q   LL+G+ D ++A LE+H GA
Sbjct: 63  IEDLEVLLEMVQEDDDDELVSELSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGA 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDW +MLLRMYTRWAE+  F  E  +   G+EAGIKS TL I G NAYG+L+ E+
Sbjct: 123 GGTESQDWGSMLLRMYTRWAEQHGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEK 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DS  RRHTSF S+ V P +DD +E+++   D +++ +R+SGAGGQH+N 
Sbjct: 183 GVHRLVRISPFDSAGRRHTSFCSVNVMPELDDDVEVDLRPEDIKMEVFRSSGAGGQHINK 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+ HIPTG+VV  Q +RSQ +N+A A  MLR+KLY++EL+++E+     +  + +
Sbjct: 243 TSSAVRLIHIPTGIVVSSQAQRSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLD 302

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYV  PY MVKD RTN E  + S V+DGDLD F+ A L  
Sbjct: 303 IGWGSQIRSYVFHPYSMVKDHRTNYETGNISSVMDGDLDGFINAYLQW 350


>gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 354

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 173/346 (50%), Positives = 226/346 (65%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD+D   + +S    K  +P  W +   A+ L+ E   L         + + L D
Sbjct: 2   ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             + LEL  E+ D  +  E      ++K +++  Q   LL+G+ D N+A LE+H GAGGT
Sbjct: 62  LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +MLLRMYTRWAE   FK + L+   GE AGI S ++LI G NAYG+L+ E+GVH
Sbjct: 122 EAQDWGSMLLRMYTRWAETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS  RRHTSF+S+ V P +DD + I+IS  + ++D YRASGAGGQHVN T S
Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+VV  Q +RSQ +N+  A NML++KLYELE QK+ E     E  + +IGW
Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L  +
Sbjct: 302 GSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347


>gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 EDL933]
 gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 365

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTS SS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSXSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
 gi|259585245|sp|C4L5K9|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
          Length = 366

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 234/350 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L       +      R++ L  +   P  W N  +A+ ++ E   L   +   +++
Sbjct: 13  MAKRLENYRASLNLTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKAMVDKYQDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            ++  D  + LEL  EE D  + +E  +++Q +K E +  + E LL+G  D+N+A LE+H
Sbjct: 73  ANQHEDGEVTLELIKEEPDAEMQEELGESIQALKKEFDDFELEILLNGPYDANNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY R+A+K+ +K E ++   GEEAG+KS TL I G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRIVGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRLVRISP+DS+ RRHTSF S  V P  DD IEIE+   D RIDTYRASGAGGQH
Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFDDDIEIEVRTEDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PTGVVV CQ ERSQ KN+  A  ML+AKLY+ EL +++   +     
Sbjct: 253 INTTDSAVRITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDEQQRKLDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT+IGWG QIRSYV  PY MVKD RTN E  + S V+DGD+  F+ A L 
Sbjct: 313 KTDIGWGSQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYLR 362


>gi|28377601|ref|NP_784493.1| peptide chain release factor 2 [Lactobacillus plantarum WCFS1]
 gi|38258340|sp|Q88YL5|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28270434|emb|CAD63336.1| peptide chain release factor 2, C-terminal fragment [Lactobacillus
           plantarum WCFS1]
          Length = 357

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/347 (48%), Positives = 220/347 (63%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG FD D   + +     +  +P  W +   A+ ++ E   L       K++ D + 
Sbjct: 4   TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D  +  EL  EE D  +  E   + Q  + +++  +   LL G  D N+A LE+H GAGG
Sbjct: 64  DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW  MLLRMYTRWA    FK E ++   G+EAGIKS TLLI G NAYG+L+ E+GV
Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+  RRHTSF+S+ V P +DD+++++I   D +ID YRASGAGGQHVN T 
Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q +RSQ +N+  A NMLRAKLYE E +K+ +     +  + +IG
Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RTN E      V+DGDLD FM A L  K
Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 350


>gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS]
 gi|166977373|sp|A8A432|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS]
          Length = 365

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G   +D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLCYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
 gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
          Length = 370

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 243/350 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++N L G  D D+  + +  L ++   P  W +   A+ +++ER  ++  ++    +
Sbjct: 12  MAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D  +L+EL  E +D + L E  D   +++  +   +F+ +LSG  D++  +  ++
Sbjct: 72  NRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY R+ E++ +KTE  +   G+EAG+K  T  + G  AYG+LK
Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D I+++I E+D R+DT+R+SGAGGQH
Sbjct: 192 AEVGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSA+RITHIPTG+VV CQ ERSQH N+A A  +LRAKLYE ELQ+RE  A      
Sbjct: 252 VNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIAGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG+L+ F+ A L 
Sbjct: 312 KKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFLM 361


>gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
 gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
          Length = 349

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL  +   TEDP +W +   A+ L RER+ L++ +  I  I   + D+
Sbjct: 5   FGGIFDYDGKCDRLEEVVRLTEDPDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDS 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L ++A EE+D   +    D+L   + ++   +F  +     D N+ +L++ AGAGGTE
Sbjct: 65  RDLFDMAREENDADTILAVQDDLAEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTR+AE++ F+ E LE  +GE AGI SATL I G  AYG L+ E GVHR
Sbjct: 125 AQDWAGMLLRMYTRYAERKGFRVEILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR+SP+DSN+RRHTSFSS++VYP VDDS  IEI+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRVSPFDSNARRHTSFSSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTG+VVQCQ +RSQH+N+ +A  MLRAKLYELEL+KR E     E +KT++GWG
Sbjct: 245 VRITHNPTGIVVQCQNDRSQHRNRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYV      +KDLRT+ E  +   V+DGDLD F++ +L 
Sbjct: 305 HQIRSYVF-DQSRIKDLRTSYEVGNIKSVMDGDLDGFIEESLK 346


>gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
 gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
          Length = 365

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 183/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSTVLRGYLDYDAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D     E    L  +  ++   +F  + SGE DS D Y+++ 
Sbjct: 74  TQGLEDVSGLLELAVEAEDEDTFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E +
Sbjct: 254 VNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 363


>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
 gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
          Length = 373

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 237/353 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +    D  +    ++ L  K  +P  W ++  ++ ++++ + L   I     I
Sbjct: 14  LKSNLEEMRASLDIASISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L EL LEE D S++ E  + LQ +K  +E  + E+LL+G  D N+A L +H
Sbjct: 74  TSQWEDLFTLSELGLEEQDESVIPEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRM+TRW E + ++ + L+  DG+EAGIKS T+ + G NAYG+LK
Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S  V P +DD+IEI I+  D R+DTYRASGAGGQH
Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASADVMPELDDTIEININPDDLRVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITHIPTGVVV CQ ERSQ +NK  A  ML+AKL+EL+ ++++E     +  
Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + EI WG QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ A L+++K
Sbjct: 314 QMEIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSMEK 366


>gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
 gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
          Length = 373

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 236/353 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +    D       ++ L  K  +P  W ++  ++ ++++ + L   I     I
Sbjct: 14  LKSNLEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L EL LEE D S++ E  + L ++K  +E  + E+LL+G  D N+A L +H
Sbjct: 74  TSQWEDLFTLAELGLEEQDESVIPEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRM+TRW E + ++ + L+  DG+EAGIKS T+ + G NAYG+LK
Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S+ V P +DD+IEI I+  D RIDTYRASGAGGQH
Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASLDVMPELDDTIEININPDDLRIDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITHIPTGVVV CQ ERSQ +NK  A  ML+AKL+EL+ ++++E     +  
Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + +I WG QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ A L++ K
Sbjct: 314 QMDIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSVGK 366


>gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
 gi|238054482|sp|B5XUF3|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
          Length = 365

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  SQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
          Length = 386

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 173/344 (50%), Positives = 246/344 (71%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  +  +   L D
Sbjct: 41  LYGGIFDYDAKAERLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGLGTGLAD 100

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  L ELA  ++D + L+    +    + ++E  +F  + S  AD  + +L++ AGAGGT
Sbjct: 101 SNELFELAAADNDDATLESIELDANGFQEKLESLEFRRMFSNPADPLNCFLDIQAGAGGT 160

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA+MLLR Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ E GVH
Sbjct: 161 EAQDWASMLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLRTETGVH 220

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS+  RHTSF+S++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDS
Sbjct: 221 RLVRKSPFDSSGGRHTSFASVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDS 280

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT++GW
Sbjct: 281 AVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGW 340

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 341 GHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 383


>gi|116494437|ref|YP_806171.1| protein chain release factor B [Lactobacillus casei ATCC 334]
 gi|227535599|ref|ZP_03965648.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631186|ref|ZP_04674217.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301065947|ref|YP_003787970.1| protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|116104587|gb|ABJ69729.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           casei ATCC 334]
 gi|227186729|gb|EEI66796.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239525651|gb|EEQ64652.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438354|gb|ADK18120.1| Protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|327381888|gb|AEA53364.1| Peptide chain release factor 2 [Lactobacillus casei LC2W]
 gi|327385049|gb|AEA56523.1| Peptide chain release factor 2 [Lactobacillus casei BD-II]
          Length = 368

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 223/349 (63%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L  LGG FD D   +R++    +  +P  W +   A+ ++     L         +++ 
Sbjct: 13  KLINLGGHFDLDALNERITENEGRMAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENE 72

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D     EL  +E D  + QE    ++ ++ +++  + + LL+G  D N+A LE+H GA
Sbjct: 73  LEDLEAGFELLQDEPDKDLQQEEEAKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGA 132

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDW +ML+RMY RWA++  FK E  +   G+EAGIKS TLLI G NAYG LK E+
Sbjct: 133 GGTESQDWGSMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEK 192

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DS  RRHTSF+S+ V P +D+SIE+++   D +++ +R+SGAGGQH+N 
Sbjct: 193 GVHRLVRISPFDSAGRRHTSFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINK 252

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+ H+PTG+V   Q +RSQ +NKA A  ML+AKLY+ E + +   A   +  + +
Sbjct: 253 TSSAVRLIHLPTGIVTSSQAQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKD 312

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +G QIRSYV  PY MVKD RTN E  + + V+DGDL+ F+ A L  +
Sbjct: 313 VAFGSQIRSYVFHPYTMVKDHRTNYETGNGNAVMDGDLNPFINAYLQWE 361


>gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225120|sp|A1JPL5|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 365

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIVTTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ 
Sbjct: 74  DQGMDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
 gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
          Length = 365

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIVGTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     ET   L  ++ ++   +F  + SGE DS D Y+++ 
Sbjct: 74  YQGLEDVQGLLELAVEADDEETFNETIAELDGLETKLGELEFRRMFSGEYDSADCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  +GE AG+KSAT+ + G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAAEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 363


>gi|295697362|ref|YP_003590600.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
 gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
          Length = 382

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 235/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +G   D     ++++ +  +      W +   A+ ++ E   L + +  ++ +
Sbjct: 15  LVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVNRLKDVVERVEGL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L EL  EE D ++L E    + ++  ++   + E +LSG  D N+A +E+H
Sbjct: 75  RSRVEDLEVLWELGHEEGDETVLGEIEAGITQVHSQLGQFELELMLSGPYDRNNAIVELH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW  MLLRMYTRWAE R +K E L+   GEEAG+KS TLLIKG NAYG+LK
Sbjct: 135 PGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++ RRHTSF+S+ V P +D+S++++I   D +IDTYR+SGAGGQH
Sbjct: 195 AERGVHRLVRISPFDASGRRHTSFASVDVLPELDESVDVDIRPEDLKIDTYRSSGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ KN+A A  +L A+LYE   +++EE        
Sbjct: 255 VNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYERRRREQEEQIAALRGE 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EI WG QIRSYV  PY MVKD RT +E  +   V+DGD+D F+ A L  +
Sbjct: 315 QKEIAWGSQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFIDAWLRQR 366


>gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
 gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
          Length = 365

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVSGLLELAVEADDEETFNEAVAELDMLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 372

 Score =  394 bits (1013), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/350 (46%), Positives = 237/350 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  L  +    D +N  +R+  L  + E P  W N   ++ +M+E   L   +    ++Q
Sbjct: 15  TEPLKEVRDSLDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQ 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           ++  +  +++E+  EE+D SI+ +  + L     + E+ + ++LLSGE D ++A + +HA
Sbjct: 75  NQKEEIELMIEMGYEENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNAIVTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA+ML RMY RWA+++ F TE L+  DG+EAGIKS T  + G NAYG+LK 
Sbjct: 135 GAGGTESCDWASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF S  V P +++ +++EI+  D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDVDVEINPDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH+PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+ E+  +  +   
Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGEL 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           TEIGWG QIRSYV+QPY MVKD RTN E  +   V++G++D+F+ A L  
Sbjct: 315 TEIGWGNQIRSYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYLKW 364


>gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
 gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
          Length = 365

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I E+
Sbjct: 14  LSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDEL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   LLELA+E DD     ET   L  +  ++E  +F  + SGE DS   YL++ 
Sbjct: 74  LQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSASCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD IEIEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIEIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ +RSQHKNK QA   +RAKLYE E+QK+       E +
Sbjct: 254 VNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNADKQQLEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
 gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
          Length = 367

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 251/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364


>gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92]
 gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM 10]
 gi|166977375|sp|A7FF38|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 365

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++ 
Sbjct: 74  EQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 376

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 225/353 (63%), Positives = 278/353 (78%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L+ L    DWD A  RL+ LN   EDP LW N   A+ L+RERQHLD A++   +
Sbjct: 11  EIKQSLSLLRRYLDWDKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D + L+EL  EE D  +++E   +L  ++ EV+ ++ E+LLSGEAD ND +LEV
Sbjct: 71  LAARLDDAVGLIELGEEESDEEVVKEAEASLAVLQTEVQKREVEALLSGEADGNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDW  MLLRMY RWAE++ +K E +E   GEEAG+KSAT+ +KG NA+GWL
Sbjct: 131 HAGAGGTESQDWTEMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I+I ++ESDCRIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDTIDIAVNESDCRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VVQCQ ERSQHKN+A AWNML+A+LYE EL+KRE+ A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKT+IGWG QIRSYVLQPYQMVKDLRT I  T+P  VLDGDL  F++A LA +
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALAQR 363


>gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344]
 gi|226830773|ref|YP_001066897.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 1106a]
 gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|81604734|sp|Q62J00|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81607820|sp|Q63SP0|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576668|sp|A3NX26|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei ATCC 23344]
 gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106a]
          Length = 367

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 251/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364


>gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
 gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
          Length = 362

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 232/355 (65%), Gaps = 1/355 (0%)

Query: 1   MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           MK+  ++    GGLFD D   + +S    K  +P  W +  +A+ ++ E   L       
Sbjct: 1   MKICKKRSLTSGGLFDLDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNF 60

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           K + D + +  + LEL   E D  +  E  D L +    +   +   LL+G+ D+N+A L
Sbjct: 61  KNLTDHVENLEVTLELLEMEADPDVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAIL 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+H GAGGTESQDW +MLLRMYTRWAE+ +FK +  +   GE AGI S T+ + G NAYG
Sbjct: 121 EIHPGAGGTESQDWGSMLLRMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYG 180

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +L+ E+GVHRLVR+SP+DS  RRHTSF+S+ V P +DDS+E+ I+  D R+D YR+SGAG
Sbjct: 181 YLRSEKGVHRLVRLSPFDSAGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAG 240

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T SAVRITH+PTG+VV  Q ERSQ +N+  A NML+AKL+ELE QK+ E     
Sbjct: 241 GQHINKTSSAVRITHLPTGIVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKL 300

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           E ++ EIGWG QIRSYV  PY MVKD RTN+E  +   V+DGDLDDF+ A L  K
Sbjct: 301 EGTQLEIGWGSQIRSYVFHPYSMVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 355


>gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 347

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 181/344 (52%), Positives = 240/344 (69%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D
Sbjct: 2   SLGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+E +D     E    L  ++ ++   +F  + SG+ D +D YL++ AG+GGT
Sbjct: 62  VEGLLELAVEAEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S +VYP VDD+I+I+I+ SD RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEVDDNIDIDINPSDLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPT  VVQCQ +RSQHKNK QA   L+AKL+ELE+QK+       E SK++IGW
Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344


>gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
 gi|39984267|gb|AAR35654.1| peptide chain release factor 2, programmed frameshift [Geobacter
           sulfurreducens PCA]
 gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
          Length = 372

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 182/348 (52%), Positives = 241/348 (69%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            ++  L G  D D+  + +  L  +   P  W N  EA+ ++RER  ++  I     +  
Sbjct: 14  ERIAKLRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNR 73

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  D  +L+EL  E  D + L E       ++ EVE  +F+ +LSG  D N  ++ ++AG
Sbjct: 74  QADDIRVLIELGEEAQDEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAG 133

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA MLLRMY R+ E++ +KTE  +   G+EAG+KSAT  + G  AYG+LK E
Sbjct: 134 AGGTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAE 193

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IEI+I+ESD R+DTYR+SGAGGQHVN
Sbjct: 194 AGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVN 253

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH+PTG+VV CQ ERSQH NKA A  MLRAKLYE ELQ+RE  A+     K 
Sbjct: 254 TTDSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKK 313

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG L+DF+ A L 
Sbjct: 314 DIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFLM 361


>gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1]
 gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1]
 gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1]
 gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8]
 gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7]
 gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1]
 gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E]
          Length = 349

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 185/346 (53%), Positives = 245/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD ++  +RL  +N + E+P +W N   A  + +E+  LD  +  I  +  +L 
Sbjct: 3   KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +LELA+E+DD S+L +    L      VE  +F  + SGE D+N+ YL++ +G+GG
Sbjct: 63  DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT+++KG  A+GWL+ E GV
Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRIDTYRSSGAGGQHVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QKR E     E SK++IG
Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E ++ + VL+GDLD F++A+L  
Sbjct: 303 WGSQIRSYVLDDS-RIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347


>gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2]
 gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 376

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 216/352 (61%), Positives = 268/352 (76%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    D   A +RL+ LN K EDP+LW +   A+ +MRER  L++ +  +   
Sbjct: 12  IKQSMGLLRRHLDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLARF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D + L+ELA  E+D +  +E    L+ +KLE E +Q E+LLSGE D ND Y+EVH
Sbjct: 72  DSELDDAVTLVELAEAEEDTATEKEAIGQLKSLKLEAERRQIEALLSGEVDGNDTYIEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA ML RMY RWAE+ KFK E +E   G+EAG+KS TLL+KG NA+GW K
Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD I+I++ ESDCRIDTYR+SGAGGQH
Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIDIDVKESDCRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE E++KRE  AN  E+S
Sbjct: 252 VNTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATEAS 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KTEIGWG QIRSYVLQPYQ+VKDLR+ +   +P DVLDGDLD FM+A LA +
Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALAQR 363


>gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 372

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 213/352 (60%), Positives = 268/352 (76%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    +WD+A+ RL  LN + EDP+LW +  +A+ LMRER  LD  +S  +++
Sbjct: 12  IRKSVALLKRHLNWDDALMRLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGCRKL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D L L+ELA  E D  +  +    L+ +K      + E+LLSGEAD+ND YLE++
Sbjct: 72  EADLDDMLGLIELADAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+QDWA MLLRMY+RWAE+  +K E +E   GE AGIKSAT+ + G NAYGWLK
Sbjct: 132 SGAGGTEAQDWAEMLLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RR TSF+S WVYPVVDD+I+I+I+ESDCRIDTYRASGAGGQH
Sbjct: 192 TEAGVHRLVRISPFDSNARRQTSFASAWVYPVVDDTIDIQINESDCRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E +
Sbjct: 252 INKTDSAVRITHIPTGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQM+KDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLASR 363


>gi|307129433|ref|YP_003881449.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
 gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
          Length = 365

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T   L +++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVSGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661]
 gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661]
          Length = 348

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 183/347 (52%), Positives = 237/347 (68%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + +++  L
Sbjct: 1   MAFSGGIFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E DD     ET   L  ++ ++   +F  + SGE DS D Y+++ AG+G
Sbjct: 61  EDVRGLLELAVEADDEETFNETIAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML+RMY RWAE + FKTE +E  +GE AG KSATL I G  A+GWL+ E G
Sbjct: 121 GTEAQDWAGMLVRMYLRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT  V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++I
Sbjct: 241 ESAVRITHLPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQSLEDNKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 301 GWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 346


>gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
 gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
          Length = 365

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T   L +++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVAGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|78223569|ref|YP_385316.1| peptide chain release factor 2 [Geobacter metallireducens GS-15]
 gi|78194824|gb|ABB32591.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           metallireducens GS-15]
          Length = 364

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 180/342 (52%), Positives = 235/342 (68%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD D+  + +  +      P  W +  +A+ L+RER  ++  +     +  +  D  
Sbjct: 12  GGLFDIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEKILELWDRLTRQADDIR 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+EL  E  D   L E      +++ +VE  +F+ +LSG  D N  Y  ++AGAGGTE+
Sbjct: 72  VLIELGEEAGDEGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKNACYFSINAGAGGTEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY R+ E++ +KTE  +   G+EAG+KSAT  + G  AYG+LK E G+HRL
Sbjct: 132 QDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYAYGYLKAEAGIHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN+RRHTSF+S++ +P ++D IE+ I+E+D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 192 VRISPFDSNARRHTSFASVFAFPEIEDDIEVTINEADLRIDTYRSSGAGGQHVNTTDSAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+V   Q ERSQH NKA A  MLRAKLYE ELQ+RE  A      K EIGWG 
Sbjct: 252 RITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKAAEIGGEKKEIGWGS 311

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL PY+MVKDLRT +E  +P  VLDGDL++F+ A L 
Sbjct: 312 QIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFLM 353


>gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
 gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
          Length = 347

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 183/343 (53%), Positives = 237/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++   + D  
Sbjct: 4   GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+GGTE+
Sbjct: 64  GLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRL
Sbjct: 124 QDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 184 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG 
Sbjct: 244 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 QIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345


>gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 383

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 235/353 (66%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +L   G   D      R++ L      P  W +   A+ ++ E   + + +  ++ +
Sbjct: 15  MATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGVKSVVDTMRRL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D  + L+LA EEDD  +  E +   +++K E++  + + +LSGE D N+A LE+H
Sbjct: 75  ESLLQDAEVALQLAQEEDDHDLFAEANRLAEQLKSEMDEFELQLMLSGEYDKNNAILELH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRWAE   +K E L+   GEEAGIKS TLL+KG NAYG+LK
Sbjct: 135 PGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQ 241
            E+GVHRLVRISP+D++ RRHTSF+S+ V P + +  + IEI   + RIDTYR++GAGGQ
Sbjct: 195 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV CQ ERSQ +N+A+A  +L+++L     ++RE+       
Sbjct: 255 HVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EI WG QIRSYV  PY +VKD RTN E ++   V+DG++D F+ A L  +
Sbjct: 315 EQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 367


>gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
 gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
          Length = 365

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I+++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIVDTIEQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA+EEDD     ET   L +++ ++   +F  + SGE DS D Y+++ 
Sbjct: 74  NQGLEDVTGLLDLAVEEDDEETFNETIIELDQLENKLGQLEFRRMFSGEYDSADCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ + G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE ELQK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|61230204|sp|P0A289|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|61230205|sp|P0A290|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76363351|sp|Q5PJG1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238690721|sp|B5BFK6|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 365

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/351 (53%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 358

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 238/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++   L D 
Sbjct: 14  LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDV 73

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE
Sbjct: 74  SGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 133

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHR
Sbjct: 134 AQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 194 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 254 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 SQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 356


>gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2846]
          Length = 365

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + LS + + L G  D+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK
Sbjct: 12  IDLSDRTSVLRGYLDFDAKVERLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y++
Sbjct: 72  NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GW
Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG
Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E
Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 312 DNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
 gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
          Length = 374

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S+ L  L    D + A  RL   N + EDP+LW +   A+ LMR+RQ L ++I+  + 
Sbjct: 11  KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++ E    L+++      K+ E+LL+GEAD ND +LE+
Sbjct: 71  IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I GPNAYGWL
Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAALAL 361


>gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000]
 gi|24638156|sp|Q9A752|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790910|sp|B8GWM3|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter
           crescentus NA1000]
          Length = 371

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 212/347 (61%), Positives = 256/347 (73%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +C GG+FDWD A+++L  LN + EDP LW    EA+ + RER +L   +  ++ I+  L 
Sbjct: 14  DCSGGVFDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLK 73

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L   ELA  E D   L +    L+ +K      + E+LLSGEAD ND Y+E+++GAGG
Sbjct: 74  DALEYAELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGG 133

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TES DWA +LLRMYTRWA      TE +E  DG++AGIKSATLL+KG NAYGWLK E GV
Sbjct: 134 TESCDWAGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGV 193

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ SD R DTYRASGAGGQH+N TD
Sbjct: 194 HRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEINPSDVRTDTYRASGAGGQHINKTD 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQKRE      E  KT+IG
Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIG 313

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLAQR 360


>gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
 gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
          Length = 365

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/351 (53%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVAGLLELAVEADDEETFNEAIAELDLLEDKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
 gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
          Length = 374

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S+ L  L    D + A  RL   N + EDP+LW +   A+ LMR+RQ L ++I+  + 
Sbjct: 11  KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++ E    L+++      K+ E+LL+GEAD ND +LE+
Sbjct: 71  IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I GPNAYGWL
Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361


>gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
 gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
          Length = 351

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 185/347 (53%), Positives = 248/347 (71%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK ++  L
Sbjct: 4   LQCFGGIFDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+G
Sbjct: 64  EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 124 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
 gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
           parvula DSM 2008]
          Length = 368

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 244/353 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  ++  +G  F+      R+  L+ +  DP  W N  +A+ + +E   L NA+   K+
Sbjct: 11  NLEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D  ++LE+A++EDD S+  E  + +++I+  +E ++   LLSGE D+N+A L  
Sbjct: 71  LVSDIEDANVMLEMAIDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEYDANNAILTF 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW +ML+RMY RWAEK  F  E ++   G+EAGIKSAT L+KG NA+G+L
Sbjct: 131 HAGAGGTEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+ +RRHTSF+++ V P +DD++EI I   D ++DTYRASGAGGQ
Sbjct: 191 KSEKGVHRLVRISPFDAAARRHTSFAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVR+TH PTG+VVQCQ +RSQ +N+ QA  +LRAKL+ELEL+K+ E+      
Sbjct: 251 HINKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +   I WG QIRSYV  PY +VKD RT++E  +   V+DG+LD F++  L  +
Sbjct: 311 TYQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFLKKE 363


>gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
 gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 206/348 (59%), Positives = 256/348 (73%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++C GG+FDWD A++RL  LN + EDP LW    EA+ + RER  L  +I  ++ ++  L
Sbjct: 1   MDCSGGVFDWDVALRRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKEL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D +   EL   E D S+++E+   L+ +K      + E+LLSGEAD NDAY+E+++GAG
Sbjct: 61  KDAVEFAELGDMEGDESLIEESRAMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA +L+RMYTRWA       E  E   GE+AGIKS TL+IKG NAYGWLK E G
Sbjct: 121 GTESCDWAGILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS++RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSSARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG+ V CQ  RSQH N+ +AW MLRA+LYE ELQKRE      E  KT+I
Sbjct: 241 DSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQKTDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 301 GWGHQIRSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLAQR 348


>gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1]
 gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium
           petroleiphilum PM1]
          Length = 355

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 170/342 (49%), Positives = 238/342 (69%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RLS +N   EDP +W +   A+ L RE++ L+  +  I  ++  L DN 
Sbjct: 12  GGIFDYDEKSRRLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNA 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ EE D   L+        +  +VE  +F  + S  AD ++ ++++ AGAGGTE+
Sbjct: 72  ELYEMSKEEGDEDGLRAIEAETLGLAAQVEQLEFRRMFSNPADPSNCFIDIQAGAGGTEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++ E++ FK    +  +G+ AGIKSAT+ ++G  A+G L+ E GVHRL
Sbjct: 132 CDWASMLLRQYLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIEIEI+ +D R DT+RASGAGGQH+N TDSAV
Sbjct: 192 VRKSPFDSSGGRHTSFASLFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E +KT++GWG 
Sbjct: 252 RLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWGH 311

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 312 QIRSYVL-DNSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 352


>gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
 gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
          Length = 357

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 232/342 (67%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++  +  D +
Sbjct: 4   GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HAGAGGTE+
Sbjct: 64  TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK E+GVHRL
Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+N T+SAV
Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL+ ++ +E     +  + EI WG 
Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 376

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 220/352 (62%), Positives = 269/352 (76%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D D + +RL  LN K E+P LW +   A+ +MRER  L+  +  IK+ 
Sbjct: 12  IKQSLGLLRRHLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L+ELA  E D +  +E  D L+ +K+E E +Q E+LLSGE DSND Y+EVH
Sbjct: 72  EGDLDDAATLIELAEAEGDEASEKEGIDLLKGLKIEAERRQIEALLSGEVDSNDTYIEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA ML RMY RWAE+ +FK E +E   G+EAGIKSATLL+KG NA+GW K
Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD IEI++ ESDCRIDTYR+SGAGGQH
Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIEIDVKESDCRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE EL++RE  AN  E++
Sbjct: 252 INTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEAT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KTEIGWG QIRSYVLQPYQ+VKDLRT     +P +VLDGDLD FM+A LA K
Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQK 363


>gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
 gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
          Length = 368

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++++L  L G  D D  ++ ++    K   P  W +  +A+ ++ E   + + +   + 
Sbjct: 12  EVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKSVVEHYER 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D   L+ELA EE D S+  E    +  +  +V   + + LL+   D  +A LE+
Sbjct: 72  LNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKLNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA ML RMYTRWAEKR FK E L+  DG+EAGIKS T+ +KG NAYG+L
Sbjct: 132 HPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGYNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P + + IE+EI   D ++DTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITEDIEVEIRTEDLKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VV CQQERSQ +N+ +A NMLR+KLYE +++++++       
Sbjct: 252 HVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQKHLAEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +++I WG QIRSYV  PY MVKD RT++E  +   V+DGDLD F+   L  +
Sbjct: 312 EQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLRSQ 364


>gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
 gi|238693117|sp|B4EDB1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
          Length = 367

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 179/352 (50%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L  +   L G  D+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ + 
Sbjct: 14  LDLRNRAGELRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +   L D L L ELA EE D   L  + ++  +++  V   +F  + S  AD N+ +++
Sbjct: 74  ALDSDLRDALDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFID 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+
Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGF 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG
Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  E
Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLE 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 314 SSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 364


>gi|1172913|sp|P43918|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2866]
          Length = 365

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + LS + + L G  D+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK
Sbjct: 12  IDLSDRTSVLRGYLDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y++
Sbjct: 72  NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GW
Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG
Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E
Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 312 DNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 365

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 237/354 (66%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L   +  +G   D +   + ++ ++ K  +P  W ++ +++ L ++ + L   IS  +
Sbjct: 10  LNLIDTIKEMGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYE 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+    D   L+EL +EE D S+ QE  +  + +  ++   + ++LLSG  D N+A L 
Sbjct: 70  SIEKLCEDLNALIELGIEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILS 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGGTE+QDW  MLLRMY RWA  + ++ E ++   G++AG+KS T+++KG  AYG+
Sbjct: 130 IHAGAGGTEAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGY 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE GVHRLVRISP+D+  RRHTSF+ + V P +DD I+++I   D +IDTYR+SGAGG
Sbjct: 190 LKGEAGVHRLVRISPFDAAGRRHTSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SA+RITHIPTG++VQCQ ERSQ +N+  A  ML+AKL +L +++++E     +
Sbjct: 250 QHVNKTESAIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLK 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               E GWG QIRSYV QPY +VKD RTN E  + + V+DGD+D+F+ A L  K
Sbjct: 310 GEHKEAGWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQK 363


>gi|297583381|ref|YP_003699161.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
 gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
          Length = 366

 Score =  391 bits (1005), Expect = e-107,   Method: Composition-based stats.
 Identities = 165/353 (46%), Positives = 233/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            ++ +L    G  D D    +++ L  +  DP  W N  EA+ ++ E   L +     +E
Sbjct: 12  NMATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSYAHTYRE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  +   L  EE+D  ++ +    ++ ++  +   + + LLSG  D+N+A LE+
Sbjct: 72  LEAAHEDLEVQFGLLEEENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQD+A+MLLRMYTR+AE+  +K E L+   G+EAG+KS TL I G NAYG L
Sbjct: 132 HPGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQITGHNAYGHL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P +++ IEI++   + RIDT+R+SGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTFRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVR+TH+PT  +V CQ ERSQ KN+ +A  ML+AKL++LE++++ + A+    
Sbjct: 252 HVNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQRQEADEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDL  F+ A L  +
Sbjct: 312 EQSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYLRSQ 364


>gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
 gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
          Length = 347

 Score =  391 bits (1004), Expect = e-107,   Method: Composition-based stats.
 Identities = 179/344 (52%), Positives = 242/344 (70%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD+D   +RL  +N + E P +W +   A+ L RER  L+  +  I ++      
Sbjct: 2   SLGGIFDYDAKKERLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEY 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+EE+D     E    L  ++ ++   +F  + SG+ D++D Y+++ AG+GGT
Sbjct: 62  ITELLELAVEENDQETFDEIEPELNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S ++YP VD++I+I+I+ +D RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIDINPADLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E++K++IGW
Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLK 344


>gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
 gi|81638630|sp|Q666T2|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
          Length = 366

 Score =  391 bits (1004), Expect = e-107,   Method: Composition-based stats.
 Identities = 187/352 (53%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           LS +   L G  FD+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I +
Sbjct: 14  LSDRTAVLRGYLFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++
Sbjct: 74  LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL
Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E 
Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364


>gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
 gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
          Length = 366

 Score =  391 bits (1004), Expect = e-107,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 232/354 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L G        +R+  L  +   P  W +  +A+ + +E  +L   +     
Sbjct: 12  QLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTEVETYHG 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D   L E+A+EE D S+  E  + ++  +  +   +   LLS + D+N+A L +
Sbjct: 72  LAAKLDDVETLWEMAMEEKDDSLQGEIEEEVENARKTLADLELGMLLSDQYDANNAILTL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW NMLLRMYTR+AE++ F  E L++  GEEAGIKSATL ++G NAYG+L
Sbjct: 132 HAGAGGTEAQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTVQGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N+RRHTSF+++ V P +D+++E+ ++  D R+D YRASGAGGQ
Sbjct: 192 KSEKGVHRLVRISPFDANARRHTSFAAVDVMPELDETVEVNLNMDDVRVDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVR+THIPTG+VVQCQ ERSQ +NK +   +LRAKLYE E   +++  +    
Sbjct: 252 HVNKTSSAVRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               I WG QIRSYV QPY MVKD RT  E  +   V+DGDLD F++A L   K
Sbjct: 312 DYQAIEWGSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYLRSLK 365


>gi|262373739|ref|ZP_06067017.1| peptide chain release factor 2 [Acinetobacter junii SH205]
 gi|262311492|gb|EEY92578.1| peptide chain release factor 2 [Acinetobacter junii SH205]
          Length = 351

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 177/343 (51%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +  + EDP +W +   A+ + +E+  L+N +     + ++L D 
Sbjct: 7   YGGIFDYDLKAERLEEVLRELEDPAIWNDQSRAQAIAKEKGSLENTLGVFDRLAEQLDDA 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +L+LA+E DD S+L++    L   +  +   +F  + S   D N  +LE+ +G+GGTE
Sbjct: 67  KAMLDLAVEADDESLLEDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFLEIQSGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ + G  AYGWL+ E GVHR
Sbjct: 127 AQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYGWLRTESGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+ RHTSFS+++V P +DD+IEI+I+ SD R DTYRASGAGGQH+N TDSA
Sbjct: 187 LVRKSPFDSNNNRHTSFSAVFVSPEIDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IGWG
Sbjct: 247 VRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L 
Sbjct: 307 SQIRSYVLDDS-RIKDLRTGVENSNTKAVLDGDLDKFIEASLK 348


>gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
 gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
          Length = 376

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 204/353 (57%), Positives = 268/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++  ++ L    + D + +RL+ LN   EDP LW +   A+ +M+ER  L++A++ I  
Sbjct: 11  EINASVDLLRQHLNVDRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDR 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   L DN+ L+EL   E D S++ E +  L  +K E+  ++ ++LLSGEADSND YLEV
Sbjct: 71  ITRDLTDNIELIELGEAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT+SQDWA MLLRMY RW E+  FK E ++   GE+AG+KSAT+++KG NAYGWL
Sbjct: 131 HAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I +EI+ESD R+DT R+ GAGGQ
Sbjct: 191 KTEAGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVEINESDVRVDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTG+ V  Q +RSQHKN+A AWNMLRAKL+E+EL+KREE A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++T+IGWG QIRSYVLQPYQ+VKDLRT +   +P +VLDGDLD FM+A LA +
Sbjct: 311 ARTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363


>gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG
           19424]
          Length = 357

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 177/345 (51%), Positives = 247/345 (71%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +  + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLV 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    +++  +  V   +F  + SGE D  +A++++ AGAGG
Sbjct: 71  GAEELFELAKEEGDDDTLESIEADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+EI+ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354


>gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 382

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 233/354 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L      +   +R+  L+ +   P  W +  +A+ + +E  +L + +     
Sbjct: 28  ELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSEVDTFTS 87

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D   L E+A+EE D +++ E    L+  K  +   +   LLS E D+N+A + +
Sbjct: 88  LETKVDDLDTLWEMAMEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYDANNAIMNL 147

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  MLLRM+TR+AE + F+ E L++  GEEAG KSATL IKG NAYG+L
Sbjct: 148 HAGAGGTEAQDWTGMLLRMFTRYAEGKGFEVELLDVLPGEEAGTKSATLAIKGHNAYGFL 207

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DSN+RRHTSF+++ V P +D+++E+ I+  D R+D YRASGAGGQ
Sbjct: 208 KSEKGVHRLVRISPFDSNARRHTSFAAVDVMPEIDNTVEVNINMDDVRVDYYRASGAGGQ 267

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVR+TH+PTG+VVQCQ ERSQ +NK +   +LRAKL+E E   +++  +    
Sbjct: 268 HVNKTSSAVRMTHLPTGIVVQCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAG 327

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               I WG QIRSYV QPY +VKD RT  E  +   V+DGDLD F+++ L   K
Sbjct: 328 DYQAIEWGSQIRSYVFQPYTLVKDHRTGAETGNIQAVMDGDLDLFVESYLRSLK 381


>gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
 gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
          Length = 367

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 179/350 (51%), Positives = 250/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G   +D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364


>gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
 gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
          Length = 350

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 177/349 (50%), Positives = 234/349 (67%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  LGGLFD +     +        DP  W +  +A+ ++ +   L + +     +++ L
Sbjct: 1   MTVLGGLFDLEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            ++ +L E+  EE D    QE  + L  ++      + + LLSGE D+N+A LE+H GAG
Sbjct: 61  ENSEVLFEMYKEESDEDTHQELIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDW  MLLRMY R+A+K+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+G
Sbjct: 121 GTESQDWGEMLLRMYQRFADKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           VHRLVRISP+DS+ RRHTSF S  V P   +D+IEIEI+  D +IDTYRASGAGGQHVNT
Sbjct: 181 VHRLVRISPFDSSGRRHTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNT 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH PTG+VV CQ ERSQ KN+ QA  ML+AKLY+ +++++E         + E
Sbjct: 241 TDSAVRITHQPTGIVVTCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAIRGEQKE 300

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IGWG QIRSYV  PY MVKD RTN+E  + + V+DGD+D F+ A L  +
Sbjct: 301 IGWGSQIRSYVFHPYSMVKDHRTNVETGNTNAVMDGDIDLFIDAYLKSQ 349


>gi|24638154|sp|Q8ZHK4|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92]
          Length = 366

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           LS +   L G   D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I +
Sbjct: 14  LSDRTAVLRGYLCDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++
Sbjct: 74  LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL
Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E 
Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364


>gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
 gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
          Length = 353

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +   + D 
Sbjct: 9   LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDV 68

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     E    L  ++ ++   +F  + +G+ D++D YL++ AG+GGTE
Sbjct: 69  EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G  AYGWL+ E GVHR
Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA
Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E +K++IGWG
Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 309 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
           27405]
 gi|125713111|gb|ABN51603.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium
           thermocellum ATCC 27405]
          Length = 357

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 232/342 (67%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++  +  D +
Sbjct: 4   GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HAGAGGTE+
Sbjct: 64  TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK E+GVHRL
Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+N T+SAV
Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL+ ++ +E     +  + EI WG 
Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
 gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
          Length = 351

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 180/344 (52%), Positives = 242/344 (70%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD+D   +RL  +  + EDP +W +   A+ + +E+  L+N I+ ++ +  +L D
Sbjct: 6   LYGGIFDYDLKKERLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQLED 65

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              +L+LA+E DD S+L +    L   +  +   +F  + S   D N  Y+E+ AG+GGT
Sbjct: 66  AQAMLDLAVEADDESLLADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSGGT 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA+MLLRMY RW E+  FK E +E  DG+ AGIKSAT+ ++G  AYGWL+ E GVH
Sbjct: 126 EAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDS
Sbjct: 186 RLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IGW
Sbjct: 246 AVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGW 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L 
Sbjct: 306 GSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLDKFIEASLK 348


>gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
 gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
          Length = 367

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 238/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +   P+ W +   A+ ++ E   L + +   + 
Sbjct: 13  KMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLVGEFQS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  + QE     +++  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFENLEVTYELIKEEPDEDLQQELVAEAKKLTKDFSEFELQLLLNEPYDKNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAG+KS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD IEIEI   + ++DTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEEIKVDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++        
Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365


>gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813009|ref|YP_002897460.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|284159918|ref|YP_001059616.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 668]
 gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10229]
 gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10247]
 gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 668]
          Length = 367

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 179/350 (51%), Positives = 250/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G   +D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364


>gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 369

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 210/352 (59%), Positives = 267/352 (75%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S  L  L    +++ AV RL+ L  +T  P  W +   A+ +MRE+  L+  I+ IK++
Sbjct: 12  ISSTLELLRKHVNFEVAVARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D + L+EL + E D  ++ E    L ++  E + +Q ESLLSGEAD+ND +LE+H
Sbjct: 72  QAEMDDCVALIELGIAEGDDDVVAEAEAVLTKLVTEADKRQLESLLSGEADANDCFLEIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML+RMY RW E+R +K   +E   GEEAGIKS T+ I G NAYGWLK
Sbjct: 132 AGAGGTEAQDWAQMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIE+ + D RIDTYRASGAGGQH
Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEVEDKDLRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH+PT +VVQCQ +RSQH+N+A A+NML+A+LYELELQKREE A+   +S
Sbjct: 252 VNKTDSAIRITHLPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAAS 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVL PYQMVKDLRTN+EK +   VLDGDLD F++A+LA +
Sbjct: 312 KTDIGWGNQIRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAAR 363


>gi|119776010|ref|YP_928750.1| peptide chain release factor 2 [Shewanella amazonensis SB2B]
 gi|119768510|gb|ABM01081.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           amazonensis SB2B]
          Length = 364

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 181/346 (52%), Positives = 235/346 (67%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG+FD+D   +RL  +  + E   +W N   A+ L +ER  L+N +  I  +   L
Sbjct: 17  LCSLGGIFDYDAKKERLEEVTRELESSDVWNNPERAQALGKERASLENVVKTIDTLDSGL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EE+D    ++    L  ++  +E  +F  + SG  D +D YL++ +G+G
Sbjct: 77  EDVEGLLELAVEEEDEGTFEDAKAELDELEKSLEDLEFRRMFSGPQDPSDCYLDIQSGSG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA M+LRMY RW E   FK E +E+ DG+ AGIKSAT+   G  AYGWL+ E G
Sbjct: 137 GTEAQDWAEMVLRMYLRWGEAHDFKPELIEVSDGDVAGIKSATIKFTGEYAYGWLRTETG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ +D RID YRASGAGGQHVN T
Sbjct: 197 VHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPADLRIDVYRASGAGGQHVNRT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKLYELELQK+       E +K++I
Sbjct: 257 ESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLYELELQKQNAEKQAAEDAKSDI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 317 GWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLK 361


>gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032]
 gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032]
          Length = 342

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 183/341 (53%), Positives = 236/341 (69%), Gaps = 1/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++   L D   L
Sbjct: 1   MFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LELA+E DD     E    L +++ ++   +F  + SGE DS D YL++ AG+GGTE+QD
Sbjct: 61  LELAVEADDEETFNEAVVELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  A+GWL+ E GVHRLVR
Sbjct: 121 WASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRI
Sbjct: 181 KSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QI
Sbjct: 241 THIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 301 RSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 340


>gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Vibrio angustum S14]
 gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum
           S14]
          Length = 353

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +   + D 
Sbjct: 9   LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDV 68

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     E    L  ++ ++   +F  + +G+ D++D YL++ AG+GGTE
Sbjct: 69  EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G  AYGWL+ E GVHR
Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA
Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E +K++IGWG
Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 309 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31]
 gi|189039999|sp|B0SXB7|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31]
          Length = 367

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 205/347 (59%), Positives = 256/347 (73%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +C GG+FDWD A+++L  LN + EDP LW    EA+ + R+R  L   +  ++E++  L 
Sbjct: 14  DCSGGVFDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLK 73

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L   ELA  E D ++L++    L+ +K      + E+LLSGEAD ND Y+E+++GAGG
Sbjct: 74  DALEYAELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGG 133

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TES DWA MLLRMY+RWA   K   E +E   G++ GIKSATLL+KG NAYGWLK E GV
Sbjct: 134 TESCDWAGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGV 193

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISPYD+ ++RHTSF+S WVYPVVDD+IEI+I+ SD R DTYRASGAGGQH+N TD
Sbjct: 194 HRLVRISPYDAAAKRHTSFASAWVYPVVDDTIEIDINPSDVRTDTYRASGAGGQHINKTD 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQ+RE      E  KT+IG
Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIG 313

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLAQR 360


>gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
 gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
          Length = 376

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 217/353 (61%), Positives = 273/353 (77%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L    D D +  RL+ LN   EDP+LW +  +A+ LM+ER  L++A++ I +
Sbjct: 11  EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTGIGK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L DN+ ++EL   E D  I++E  + L+ +K EV  ++ E+LLSGEAD  D YLEV
Sbjct: 71  VERELTDNIDMIELGEAEGDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMY RWAEK  FK E LE  DGEEAGIKSAT+ I G NAYGWL
Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I ESD R DT R+ GAGGQ
Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKESDVRTDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LYE+EL+KREE A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+FM ATLA +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363


>gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
 gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
          Length = 367

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 180/352 (51%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L  +   L G   +D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ + 
Sbjct: 14  LDLRTRAGELRGYLCYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+ + L D L L ELA EE D   L  + ++  +++  V   +F  + S  AD N+ +++
Sbjct: 74  ELDNDLRDALDLFELAREEGDEDTLIASEEDAAKLEARVADIEFRRMFSNPADPNNCFID 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+
Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGY 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG
Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+   +  E
Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLE 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 314 SSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364


>gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
 gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
          Length = 375

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    D++ A+ RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  EIEKSLELLAQRMDYETALHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++Q+  D +Q+++ +   K+ E+LL GEADSND +LE+
Sbjct: 71  IKTDLSDNIELIELGEMEEDGEVVQDAEDAIQKLRAKSAKKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMAATLAL 361


>gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT]
 gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus
           flagellatus KT]
          Length = 354

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 181/352 (51%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M L       GG+FD+D   QRL  ++   EDP++W +   ++ L +ER+ L+  ++ + 
Sbjct: 1   MILRSATRPYGGIFDFDTKQQRLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLT 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++ + D+  L E+A EE+D   L+    + Q ++  V   +F  + S   D N+ +L+
Sbjct: 61  EVENGVRDSRELFEMAREENDDDTLRSIDADTQALEKIVAEMEFRRMFSHPMDQNNCFLD 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG+GGTE+QDWA+MLLRMY R+ E + FK E LE  +G+ AGIKSA+L I G  AYG+
Sbjct: 121 IQAGSGGTEAQDWASMLLRMYLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGF 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI +EI+ +D RIDTYRASGAGG
Sbjct: 181 LRTESGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIVVEINPADLRIDTYRASGAGG 240

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N TDSAVRITH+PT  VVQCQ +RSQH+NK +A NML+A+LY LEL+KR E     E
Sbjct: 241 QHINKTDSAVRITHLPTNTVVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAME 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +KT+IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F+  +L 
Sbjct: 301 DAKTDIGWGHQIRSYVL-DQSRIKDLRTNVEVGNTQGVLDGDLDPFISESLK 351


>gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
 gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
          Length = 365

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 245/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  ++ + E P +W +   A+ L +ER  L+  +  +  +
Sbjct: 14  LSARAAALRGYLDFDVKKERLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  LLE+A EEDD + +     ++   + ++   +F  + SGE D ++AYL++ 
Sbjct: 74  AQGLNDNADLLEMAAEEDDEATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA++L+RMY RW ++R FKTE +E+ DGE AGIKSAT+  +G  A+GWL+
Sbjct: 134 SGAGGTESQDWASILMRMYLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEIE++ +D R+D +RASGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFASVFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR TH+PTGVVV CQ ERSQ +N+ +A  ML+AKLYELE+QKR  ++   E +
Sbjct: 254 VNRTESAVRFTHLPTGVVVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++ WG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 314 KSDVSWGNQIRSYVL-DQSRIKDLRTGHETGNTQAVLDGDLDPFIEASLK 362


>gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
 gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
          Length = 370

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 163/352 (46%), Positives = 235/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L  + G  D     +R+  L  +   P  W +   A+  + E   + + +  + ++
Sbjct: 16  MAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNAIKSLVETMAKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D  ++LEL +EE D S++ +  D+ Q ++   E  + E LLS E D N+A LE+H
Sbjct: 76  DSQYEDLQVMLELVIEEGDSSLIPDLYDSTQELRKSFESFELELLLSDEYDKNNAILELH 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW + + FK E L+   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 136 PGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVTLLIKGYNAYGYLK 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++ RRHTSF S  V P ++D   ++I   D ++DTYR+SGAGGQH
Sbjct: 196 SEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNVVDIRTEDLKVDTYRSSGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+P+G+VV CQ ERSQ KN+ +A  ML A+L+E + +++E+     +  
Sbjct: 256 INTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKKREEQEKTLAAIQGE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  +
Sbjct: 316 QKDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFIDAYLRAQ 367


>gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
 gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
          Length = 377

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 239/350 (68%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + L  +    D DN ++R+  L+   E+P  W++  ++  +++  ++L + +   +E++
Sbjct: 15  EKPLVEVRDSLDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +++E+  EE+D S++ E  + L+  K  +E  +  +LLSGE DS++A L ++A
Sbjct: 75  RQYEDIGVMIEMGNEENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DW  ML RM+ RWAEK+ F  E L+  DGEEAGIKS T+ I GPNAYG+LK 
Sbjct: 135 GAGGTESCDWCGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF S  V P +++ +++EI+E D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDLDVEINEEDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH+PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+  E  +      
Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           TEIGWG QIRSYVLQPY MVKD RTN E  +   VLDG LD FM A L  
Sbjct: 315 TEIGWGNQIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYLRW 364


>gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 375

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 198/352 (56%), Positives = 253/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    D++ A  RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  EIQKSLELLAQRMDYETAAHRLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++++  + L++++ +   K+ E+LL GEAD+ND +LE+
Sbjct: 71  IKTDLKDNVELIELGEMEGDEEVVKDAEEALKKLRDKAAEKELEALLDGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ +D R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRVDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDL  FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAM 361


>gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1]
 gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 367

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 177/350 (50%), Positives = 249/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + N L    D+D+  +RL+ +N   EDP +W +   A+ L RER+ L++ +  +  I
Sbjct: 16  LRNRSNELRRFLDFDSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLEDVVLGLIRI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   L E+A  E+D   L   + ++Q I+  V   +F  + S  AD N+ ++++ 
Sbjct: 76  SQNLDDAAELFEMAQAENDDDSLNSIAADVQDIETRVAALEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE  DG+ AGI+SA+L ++G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVEGEYAYGHLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++V P VDDSIE++I+ +D RIDT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVSPEVDDSIEVDINPADLRIDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITH PTG+VVQCQ +RSQH+NKA+A +ML+++LYELEL+KR+  A+  E+S
Sbjct: 256 INKTDSAIRITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELELRKRQSEADKLEAS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIEASLK 364


>gi|33151768|ref|NP_873121.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
 gi|33147989|gb|AAP95510.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
          Length = 351

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +  GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +   + 
Sbjct: 5   SSFGGIFDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIE 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L+ELA+E +D   L E       +  ++   +F+ + SG  D+ D YL++ AG+GG
Sbjct: 65  DVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQAGSGG 124

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+
Sbjct: 125 TEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGI 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQHVN T+
Sbjct: 185 HRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTE 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VVQCQ  RSQH+NK Q    LRAKLYE+E+ K+       E +K++IG
Sbjct: 245 SAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIG 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 305 WGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus sp. MC-1]
 gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus sp.
           MC-1]
          Length = 379

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 182/352 (51%), Positives = 249/352 (70%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  L G  +++   +RLS L +  +DP+LW +   A+ +M E+  L+  I     +
Sbjct: 20  IGEKLTLLRGHLNYEQGKERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDAL 79

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   LLE+A EE D  ++ E +  +  I   +E  +   +LSGEAD+N+ ++E+H
Sbjct: 80  NSESTDARDLLEMAQEEGDSGMIAEVTAQVAAILKRLEGLELARMLSGEADANNCFIEIH 139

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++LLRMY R+ EK  FKTE ++   G+EAGIKS T+ ++G  AYG+LK
Sbjct: 140 PGAGGTESQDWASILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYLK 199

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS++RRHTSF+S+ VYP +DDSIEIEI + D R+DT+RASGAGGQH
Sbjct: 200 VESGVHRLVRISPFDSSARRHTSFTSVNVYPEIDDSIEIEILDKDLRVDTFRASGAGGQH 259

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH PTG+VVQCQ  RSQH+N+ +A  MLRA+L++LE+ KR E A     +
Sbjct: 260 VNKTDSAIRITHQPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVADA 319

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++I WG QIRSYVL PY++VKDLRT+ E  +   VLDG+LD F+KA L+ +
Sbjct: 320 KSDIAWGHQIRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALSQR 371


>gi|319783261|ref|YP_004142737.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 376

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 233/353 (66%), Positives = 290/353 (82%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L   FDWD A++RL +LN + ED  LW   +EA+ LMRERQ L+  I+ +K 
Sbjct: 11  EIRQAITLLRRHFDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L DN+ L+EL  EE D  ++ E    ++ ++ E + +Q E+LLSGEADSND YLE+
Sbjct: 71  LTQALEDNIGLIELGEEERDEGVIAEAEAAIRSMQGEAKARQVETLLSGEADSNDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGIKSATL+IKG NAYGW+
Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SESD RIDTYR+SG+GGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+ TG+ V CQ ERSQHKNKA+AW MLR++LYE EL+KRE +AN  E+
Sbjct: 251 HVNTTDSAVRITHLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDDFM+A+L+ +
Sbjct: 311 SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQR 363


>gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
 gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
          Length = 359

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 171/342 (50%), Positives = 248/342 (72%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL  +N + EDP++W +   A+ L +E++ L+  +  +  + + L D  
Sbjct: 16  GGIFDYDAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGVVDVLSSLDNDLRDTK 75

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ++A EE+D   L    +++ ++   VE  +F  + S  AD N+A++++ AGAGGTE+
Sbjct: 76  DLFDMAREENDEDTLVACEEDVAKLTTRVEDMEFRRMFSNPADPNNAFIDIQAGAGGTEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIKSAT+ ++G  AYG+L+ E G+HRL
Sbjct: 136 CDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGEYAYGFLRTETGIHRL 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP +D+S EIE++ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 196 VRKSPFDSSGGRHTSFSSVFVYPEIDESFEIEVNPADLRIDTYRASGAGGQHINKTDSAV 255

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ K+++GWG 
Sbjct: 256 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQSEQDKLEAGKSDVGWGH 315

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 316 QIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDAFISASLK 356


>gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
 gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
          Length = 382

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 183/343 (53%), Positives = 246/343 (71%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL  +N + EDP++W N   A+ L RER  L   +  + ++   L D+
Sbjct: 38  FGGIFDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADS 97

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL++A+EE D   + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE
Sbjct: 98  RDLLDMAVEEGDEGAVGDVAGEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTE 157

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ +KG  A+GWL+ E GVHR
Sbjct: 158 AQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHVKGEYAFGWLRTEIGVHR 217

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 218 LVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSA 277

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IGWG
Sbjct: 278 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEMQKRTAASQALEDTKSDIGWG 337

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L 
Sbjct: 338 HQIRSYVL-DQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLK 379


>gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
          Length = 375

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 166/349 (47%), Positives = 234/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + L+ +G   D  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++ 
Sbjct: 15  KQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLV 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D + L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HA
Sbjct: 75  SQWEDLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK 
Sbjct: 135 GAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL+ ++ +E     +  +
Sbjct: 255 NKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            EI WG QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 315 LEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 363


>gi|71153099|sp|Q7VNG1|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   + G  D+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +
Sbjct: 14  LTERTQLIRGYLDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L+ELA+E +D   L E       +  ++   +F+ + SG  D+ D YL++ 
Sbjct: 74  IQGIEDVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+P+G+VVQCQ  RSQH+NK Q    LRAKLYE+E+ K+       E +
Sbjct: 254 VNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEEN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 347

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 177/344 (51%), Positives = 239/344 (69%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D
Sbjct: 2   SLGGTFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+EE+D     E    L  ++ ++   +F  + +G+ D +D Y+++ AG+GGT
Sbjct: 62  VEGLLELAVEEEDQETFDEIEPELAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ + G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEIDDNIAIDINPSDLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E ELQK+       E SK++IGW
Sbjct: 242 AVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344


>gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
 gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
          Length = 374

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S+ L  L    D D A  RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  QISKSLELLAQRLDVDTAPYRLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  +++E    L+ +      K+ E+LL+GEADSND +LE+
Sbjct: 71  IKQELADNVELIELGEMEGDEEVIKEAEVALKSLAATAAQKELEALLNGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K +      GEEAGIKSAT  I+G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M ATLA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLAL 361


>gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134]
 gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia
           eutropha JMP134]
          Length = 357

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 176/345 (51%), Positives = 248/345 (71%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +S + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVGRLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLN 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    +++  +  V   +F  + +GE D  +A++++ AGAGG
Sbjct: 71  GADELFELAKEEGDDETLESIETDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354


>gi|15642771|ref|NP_230312.1| peptide chain release factor 2 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 365

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 183/349 (52%), Positives = 242/349 (69%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++ 
Sbjct: 15  SERTNILRGYLDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLD 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D   LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+D YL++ A
Sbjct: 75  RGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ 
Sbjct: 135 GSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRT 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHV
Sbjct: 195 ETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K
Sbjct: 255 NTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAK 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           ++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 315 SDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362


>gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 368

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 234/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ + +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE+D S+ ++    L  I   +E  Q E LLSGE D+N+A L +H
Sbjct: 72  AAKYEDAETLYEMGIEENDPSMERDIRAELDLIAEGLETLQLEVLLSGEYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSA+L IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E++I   D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
 gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
          Length = 375

 Score =  388 bits (996), Expect = e-106,   Method: Composition-based stats.
 Identities = 202/352 (57%), Positives = 250/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD A  RL   N + EDP+LW +  +A+ LMRERQ L +AI     
Sbjct: 11  EIEKSLELLRQRMDWDTAKHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + DN+ L+EL   E D  ++ E    L+ +K +   K+ E+LL+GEAD+ND +LE+
Sbjct: 71  INQEMSDNIELIELGEMEGDNEVIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD IEIE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDDIEIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAM 361


>gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
 gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
          Length = 364

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 178/350 (50%), Positives = 244/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  ++ + EDP +W +   A+ L +ER  L+  +  +  +
Sbjct: 13  LSERSQILRGYLDYDAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D+  LL++A+EEDD   ++     L  +  ++   +F  + SGE D+N A+L++ 
Sbjct: 73  ESGVEDSKDLLDMAVEEDDADSVEAVELELNDLDEQLAKLEFRRMFSGEMDANSAFLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANMLLRMY RW E + FK E +E+ +GE AGIKSAT+  +G  A+GWL+
Sbjct: 133 SGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFEGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S+++ P +DD++EI+I+ +D RIDTYR+SGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFLSPEIDDNVEIDINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VVQCQ +RSQH NK  A   LRAKLYELE+ KR E A   E +
Sbjct: 253 VNTTDSAVRITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKRTEAAQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E T+   VLDG LD F+ A+L 
Sbjct: 313 KSDIGWGSQIRSYVL-DSSRIKDLRTGVESTNTGSVLDGSLDQFIVASLK 361


>gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72]
 gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 373

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 174/346 (50%), Positives = 237/346 (68%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D    +L  +N   EDP +W +   A+ L +E++ L+  +  +++I+ + 
Sbjct: 26  VANSGGIFDYDEKSSKLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQS 85

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L +LA  E D    +    +L  ++  V   +F  + S   D N  ++E+ AGAG
Sbjct: 86  ADLKDLFDLADMEGDDDTFEAVEGDLVGLEALVGQLEFRRMFSNPMDPNACFIEIQAGAG 145

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY R+ EK+ F  E +E  +GE AGIK+ T+   G  AYG+L+ E G
Sbjct: 146 GTEAQDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETG 205

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N T
Sbjct: 206 IHRLVRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKT 265

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PTG+VVQCQ +RSQH+NK +A +ML+A+LYELEL+KR+      E +K++I
Sbjct: 266 DSAVRITHQPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDI 325

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT  E  +   VLDGDL+DF+ A+L 
Sbjct: 326 GWGHQIRSYVL-DQSRIKDLRTGYEVGNTQAVLDGDLEDFIAASLK 370


>gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
 gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
          Length = 368

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 233/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ + +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE+D ++  +    L  I   +E  Q E LLSGE D+N+A L +H
Sbjct: 72  AAKYEDAETLYEMGIEENDPTMEGDIRAELDAIAEGLETLQLEVLLSGEYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSA+L IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E++I   D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 373

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 201/352 (57%), Positives = 254/352 (72%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    DWD A ++L  LN + EDP LW +   A+ + RER  L   I  + E+
Sbjct: 12  IEQSVALLRRRLDWDVANRKLDELNARVEDPTLWNDPDAAQAVSRERSRLKTQIDTVLEM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L + ++L ++A EE D + L+E    L+ IK      + E+LLSGEAD NDAYLEV+
Sbjct: 72  ESGLEEGVMLADMADEEGDEATLEEARAALKAIKDRASRAELEALLSGEADGNDAYLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA MLLRMY+RWA+   ++ +     DG++AGIKSAT+L+ GPNAYGWLK
Sbjct: 132 SGAGGTESCDWAGMLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYD+ ++RHTSF+S+ V PVVDD+IEI+I+ +D R DTYRASG+GGQH
Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFASVGVSPVVDDTIEIDINPADVRTDTYRASGSGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPT  VV CQ  RSQH+N+ QAW MLR +LYELELQKRE  A     +
Sbjct: 252 INKTDSAVRLTHIPTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKREAAAQALADA 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAAR 363


>gi|94309981|ref|YP_583191.1| peptide chain release factor 2 [Cupriavidus metallidurans CH34]
 gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
          Length = 357

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 174/345 (50%), Positives = 246/345 (71%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +  + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVNRLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLN 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    ++   +  V   +F  + SGE D  +A++++ AGAGG
Sbjct: 71  GTDELFELAREEGDDETLESIEADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ ++G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354


>gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
 gi|123361814|sp|Q165J6|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
          Length = 374

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 201/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L    D + A  RL   N + EDP LW +   A+ LMRERQ L +A++    
Sbjct: 11  KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN+ L+EL   EDD  ++ +  + L+ ++     K+ E+LL GEADSND +LEV
Sbjct: 71  IKQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E   + DG+EAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+IE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+ 
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362


>gi|54307774|ref|YP_128794.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
 gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
          Length = 353

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG FD+D   ++L  +N + E P +W     A+ L + R  L+  +  I ++   +
Sbjct: 6   LTSLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EEDD     E    L  ++ ++   +F  + SGE DS+D Y+++ AG+G
Sbjct: 66  EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +M+LRMY RWA+ + FKTE +E+  G+ AG+KSAT+ + G  AYGWL+ E G
Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT
Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E SK++I
Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDI 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 306 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91]
 gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas
           eutropha C91]
          Length = 348

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 178/346 (51%), Positives = 242/346 (69%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D    RL+ L  ++EDP +W +   A+ L RE++ L+N +  ++ I  +L
Sbjct: 1   MKFYGGIFDFDAKQVRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LL++A EE D   L   S+++  +   VE  +F  + S   D N+ ++++ +G+G
Sbjct: 61  QDAQELLQIAQEESDDETLHSISEDVAGLAKTVEEMEFHRMFSDPMDPNNCFIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+ML RMY  + E+R    E LE   G+ AGIKSAT+ + G  AYG+L+ E G
Sbjct: 121 GTEAQDWASMLERMYLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N T
Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+VVQCQ  RSQH+N+A A  +L+++LYE EL+KR E     E SKT+I
Sbjct: 241 DSAVRITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYVL     +KDLRTNIE  +   VLDGDLD F++A+L 
Sbjct: 301 AWGHQIRSYVL-DQSRIKDLRTNIEVGNTQAVLDGDLDVFIEASLK 345


>gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola sp. JR]
 gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
          Length = 371

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 242/355 (68%), Gaps = 1/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L+ +L  L    D    V+ ++ L  KT +   W N +EA+ +MRE   L + I    
Sbjct: 10  IELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKDTIGLYN 69

Query: 61  EIQDRLCDNLILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++ +  D   L EL +E+DD   I +E + +++ ++  VE  +   LL  + D  +A +
Sbjct: 70  TLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGDKYDKGNAII 129

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +HAGAGGTE+QDW  MLLRMYTRWAE++ +K + L++  G+EAGIKSA++ I+GP AYG
Sbjct: 130 SLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISIEGPYAYG 189

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E+GVHRLVRISP+D++ RRHTSF+S+ V P VDD  EI I  +D RIDT+R+ GAG
Sbjct: 190 YLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDETEIVIDPADLRIDTFRSGGAG 249

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSAVRITHIPTG+VVQCQ ERSQH N+ +A  +L+A+L +LE++K+EE  N  
Sbjct: 250 GQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKKKEEELNKL 309

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              + EI WG QIRSYV  PY +VKD RT +E  +   V+DG++D+F+ A L  +
Sbjct: 310 RGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYLKSR 364


>gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12]
 gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12]
          Length = 367

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 246/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  L G  D+D    RL  +    EDP +W +   A+ L RER+ L+  +  ++ +
Sbjct: 16  LQQRVQALRGYLDFDAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  L E++ EE D +  +    ++++   EVE  +F  + S   D ++ ++++ 
Sbjct: 76  TTALADHSELFEMSREEGDDATCEAIEADVEKSAAEVEALEFRRMFSNPLDPSNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE +E  +G+ AGI+SAT+ ++G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+TH+PTG+VVQCQ +RSQHKN+A+AW MLR++LYE E++KR       ES+
Sbjct: 256 INKTDSAVRLTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLEST 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD+F+ A+L 
Sbjct: 316 KSDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDEFITASLK 364


>gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
 gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
          Length = 353

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG FD+D   ++L  +N + E P +W     A+ L + R  L+  +  I ++   +
Sbjct: 6   LTFLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EEDD     E    L  ++ ++   +F  + SGE DS+D Y+++ AG+G
Sbjct: 66  EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +M+LRMY RWA+ + FKTE +E+  G+ AG+KSAT+ + G  AYGWL+ E G
Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT
Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E SK++I
Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDI 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 306 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia
           Coli
          Length = 365

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 232/351 (66%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + + 
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQX 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F    SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRXFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ L R Y RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA    +AKLYE+E QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix]
 gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
          Length = 364

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      LGG+FD+    +RL  +  + E+P +W +   A+ L +ER  L+N +  I+EI
Sbjct: 13  LKAAWKALGGIFDYPVKEERLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +L D+  LLE+A  +DD         +++ +   VE  +F  + SG+ D  +AYL++ 
Sbjct: 73  GTQLDDSRDLLEMAEADDDAETASAVEADVEALTARVEALEFRRMFSGDMDEANAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWAE   FKTE +E+ +GE AGIKSAT+ I+G  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++  P VDDS EIEI+ +D R+DTYRASGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFASPEVDDSFEIEINPADLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH P+G+VV CQ +RSQHKN+  A   L+AKLYE+E+QKR       E +
Sbjct: 253 VNRTESAIRITHEPSGIVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDA 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 KSDIGWGSQIRSYVL-DQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361


>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
 gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           UCC118]
 gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 355

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 167/347 (48%), Positives = 232/347 (66%), Gaps = 1/347 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D
Sbjct: 2   NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61

Query: 69  NLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             + LEL  E  DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGG
Sbjct: 62  LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GV
Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T 
Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IG
Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L  K
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348


>gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 375

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 204/353 (57%), Positives = 262/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DWD AV+RL  LN + EDP LW +  +A+ +MRER+ L+ +I  + +
Sbjct: 11  RIEAALALVRKFLDWDRAVRRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASIGTVNQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D   + E    L  +    +  + ++LL+GEAD+N+A+LEV
Sbjct: 71  IGQEMADAIEFVELGEMEGDEDTINEGLATLAALAERADNDKVQALLAGEADANNAFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMYTRWAE+  +K E ++ H GE AGIKSATLLIKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+IE+EI+ +D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIEVEINPADLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V  Q +RSQHKN+A A  ML+A++YE EL KRE  A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ VKDLRT +  T+P++VLDG LD FM A L+ +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363


>gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           CECT 5713]
          Length = 355

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 167/347 (48%), Positives = 232/347 (66%), Gaps = 1/347 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D
Sbjct: 2   NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61

Query: 69  NLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             + LEL  E  DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGG
Sbjct: 62  LEVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GV
Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T 
Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IG
Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L  K
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348


>gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222]
 gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus
           denitrificans PD1222]
          Length = 402

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 199/352 (56%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  LG   DW+ A  RL  LN   E   +W +   A+ LMR+RQ L +A+   + I
Sbjct: 39  IRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRRI 98

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN  L+EL   E D  I+ +    L+ +      K+ E+LL+GEAD ND +LE++
Sbjct: 99  ESELKDNAELIELGEAEGDDEIVADAEAALKSLAELAAQKELEALLNGEADGNDTFLEIN 158

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +  E L    GEEAGI+SA   I GPNAYGWLK
Sbjct: 159 AGAGGTESADWASMLARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWLK 218

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI I +++ RIDTYR+SGAGGQH
Sbjct: 219 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEITIPDNEIRIDTYRSSGAGGQH 278

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV    E+SQH+N+A A   L+A+LY+LEL KR    N    +
Sbjct: 279 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRANAMAALKARLYQLELDKRNAAINAQHEA 337

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVL PYQMVKDLRT  E +    VLDG LD FM ATLA+ 
Sbjct: 338 KGDAGWGNQIRSYVLHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLALD 389


>gi|308198348|ref|YP_003933612.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
 gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
          Length = 364

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 187/350 (53%), Positives = 250/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D    RL  +N + EDP++W N   A+ L RER  L   +  + ++
Sbjct: 13  LSERTQTIRGYLDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D N+AYL++ 
Sbjct: 73  TSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E S
Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L 
Sbjct: 313 KSDIGWGHQIRSYVL-DQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLK 361


>gi|172087665|ref|YP_203835.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
 gi|229576704|sp|Q5E7P9|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
          Length = 365

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 178/349 (51%), Positives = 240/349 (68%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  + 
Sbjct: 15  SERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLLD 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D   LLELA+EE+D     E    L  ++ ++   +F  + SG+ D++D Y+++ +
Sbjct: 75  QGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASDCYIDLQS 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K AT+ I G  AYGWL+ 
Sbjct: 135 GSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLRT 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ SD RID YRASGAGGQHV
Sbjct: 195 ETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPSDLRIDVYRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E ELQK+       E +K
Sbjct: 255 NTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAEKQANEDAK 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           ++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 315 SDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362


>gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
 gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
          Length = 347

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 177/342 (51%), Positives = 243/342 (71%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL+ L  ++EDP +W +   A+ + RE++ L+N +  ++ +  +L D  
Sbjct: 4   GGIFDFDAKQIRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTH 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL++A EE+D   LQ  +D++  +   +   +F  + S   D N+ ++++ +G+GGTE+
Sbjct: 64  ELLQIAQEENDKETLQSIADDVTELDQTLAGMEFRRMFSDPMDPNNCFVDIQSGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML RMY R+ E+R    E LE   G+ AGIKSATL I G  AYG+L+ E GVHRL
Sbjct: 124 QDWASMLERMYLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DT+RASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VVQCQ  RSQH+N+A A  +L+++LYE EL+KR E     E SKT+I WG 
Sbjct: 244 RITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTNIE  +   VLDGDLD F++A+L 
Sbjct: 304 QIRSYVL-DQSRIKDLRTNIEIGNTQAVLDGDLDTFIEASLK 344


>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
           BON]
 gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
           australiensis 50-1 BON]
          Length = 353

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 168/341 (49%), Positives = 231/341 (67%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD     + +  L  +  DP  W ++  ++ + +  + L + +  ++ ++ +  D   L
Sbjct: 6   LFDPAGMEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +L  EEDD SI+ E +  L  ++ EVE  + E+LLSG  D N+A + +HAGAGGTE+QD
Sbjct: 66  ADLGREEDDASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEAQD 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML RMYTRWAE + +K E L++ +G+EAGIKS T L++G NAYG+LK E+GVHRLVR
Sbjct: 126 WVQMLYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRLVR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+S+ V P +DD   +EI+  D +IDTYR+SGAGGQHVN T+SA+RI
Sbjct: 186 ISPFDAAGRRHTSFASVDVMPELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAIRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ ERSQH NK  A  ML+AKL EL+ Q+ +   +  +     I WG QI
Sbjct: 246 THIPTGIVVQCQNERSQHSNKETAMKMLKAKLLELKEQEEQAKISDIKGELKRIEWGSQI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSY+ QPY MVKD RTN E  + + V+DGD+D F+   L +
Sbjct: 306 RSYIFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLKM 346


>gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506]
 gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506]
          Length = 376

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 213/353 (60%), Positives = 267/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++      L    D+D +  RL+ LN   EDP+LW +   A+ LM+ER  L++ +  I+ 
Sbjct: 11  EIREAAGLLRQHIDFDRSKARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIER 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   L DN+ L+EL   E D SI+ E +  L R+K EV  +Q E+LLSGEADSND+YLEV
Sbjct: 71  INRELADNVELIELGEAEGDDSIVDEAAAALDRLKAEVARRQLEALLSGEADSNDSYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT+SQDWA MLLRMYTRWAE+R FK E +E   GE AG+KSAT+L+KG NAYGWL
Sbjct: 131 HAGAGGTDSQDWALMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I ++I E+D R+DT R+ GAGGQ
Sbjct: 191 KTEGGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVDIKEADVRVDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTG+ V  Q +RSQHKN+A AW+MLRAKLYE+EL+KRE  A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KT+IGWG QIRSYVLQPYQ+VKDLRT +   +P +VLDGDLD FM+A LA +
Sbjct: 311 AKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363


>gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
 gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
          Length = 368

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ L +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYKGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE D S+  +    L  I   +E  Q E LLSG+ D+N+A L +H
Sbjct: 72  MAKYEDAETLYEMGIEEGDASMEDDIRAELDLITEGLETLQLEVLLSGDYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFAVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E+ I+  D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
 gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
          Length = 373

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 207/352 (58%), Positives = 253/352 (71%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    DWD A++RL  LN + EDP LW    EA+ +MRER  L   +  +  +
Sbjct: 12  IEQSIGLLRRRLDWDVALRRLDELNARVEDPTLWDKPEEAQSVMRERTKLSGGVDAVNSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D L   ELA  E D  +L+E    L+ IK +    + E+LLSGEAD NDAY+E++
Sbjct: 72  TKELQDALDYAELADMEGDEELLEEARAMLKAIKEKAARAELEALLSGEADGNDAYVEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA +LLRMYTRWA +        E   GE+AGIKSAT+++KG NAYGWLK
Sbjct: 132 SGAGGTESCDWAGILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKGTNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH
Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVR+THIPTG+ V CQ  RSQH N+ +AW MLRA+LYELELQKRE      E  
Sbjct: 252 VNKTDSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKREAAQAALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRT++E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLAQR 363


>gi|298500779|ref|ZP_07010582.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
 gi|297540560|gb|EFH76618.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
          Length = 344

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D  
Sbjct: 1   GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+D YL++ AG+GGTE+
Sbjct: 61  GLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV
Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG 
Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 QIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341


>gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
 gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
          Length = 368

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 234/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ L +E   L   +   +++
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE+D S+  +    L  I   +E  Q E LLSGE D+NDA L +H
Sbjct: 72  VAKYEDAETLYEMGIEENDASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  +  ++  G+EAG+KSATL IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E+ I+  D R+D +RASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYFRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DGD+D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363


>gi|297580789|ref|ZP_06942715.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
 gi|297535205|gb|EFH74040.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
          Length = 344

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 242/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D  
Sbjct: 1   GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E +D     E    L  +++++E  +F  + SG+ DS+D YL++ AG+GGTE+
Sbjct: 61  GLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV
Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG 
Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 QIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341


>gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
 gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
          Length = 355

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 167/347 (48%), Positives = 232/347 (66%), Gaps = 1/347 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D
Sbjct: 2   NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61

Query: 69  NLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             + LEL  E  DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGG
Sbjct: 62  LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GV
Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T 
Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IG
Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L  K
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348


>gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
 gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
          Length = 386

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 232/355 (65%), Gaps = 1/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M +   L  LGGLFD +N    +        DP  W +  +A+ ++ +   L + ++   
Sbjct: 26  MNIRITLTKLGGLFDLENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYH 85

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ + + D     EL  EE D  +  E  + + + K +++  + + LL G  D+N+A LE
Sbjct: 86  DLANEVEDMSATRELLQEEYDEDMKAELEEEVIQFKEKMDQYELQLLLDGPHDANNAILE 145

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA+MLLRMY R+ E++ FK E ++   G+EAG+KS TLLIKG NAYG+
Sbjct: 146 LHPGAGGTESQDWASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGY 205

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAG 239
           LK E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAG
Sbjct: 206 LKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAG 265

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML++KLY+L+L+++E      
Sbjct: 266 GQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEI 325

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              + EIGWG QIRSYV  PY MVKD RTN E      V+DG+++ F++A L  +
Sbjct: 326 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYLRKE 380


>gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
 gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
          Length = 332

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 169/327 (51%), Positives = 230/327 (70%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K   P  W +  EA+ + +E   L ++IS  ++++ R  D   L +L ++E D S+ 
Sbjct: 1   MEHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVY 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E +  L+ +  ++E  +   LL+GE D+N+A L +HAGAGGTE+QDWA MLLRMY RWA
Sbjct: 61  DEVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EKR +K E L+   GEEAGIKSAT+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTS
Sbjct: 121 EKRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+++ V P +DD+ EI I+ +D +IDT+R+ GAGGQHVN T+SAVRITH+PTG+VVQCQ 
Sbjct: 181 FAAVDVMPEIDDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQCQS 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+ QA  +LRAKL+ELE QKRE+  +        I WG QIRSYV  PY +VKD
Sbjct: 241 ERSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
            RTN E  +   V+DG++D F++A L 
Sbjct: 301 HRTNAETGNVQAVMDGEIDLFIEAYLR 327


>gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16]
 gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16]
          Length = 357

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 176/345 (51%), Positives = 248/345 (71%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ ++  +S + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTDDLS 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    +++  +  V   +F  + SGE D  +A++++ AGAGG
Sbjct: 71  GAEELFELAREEGDDDTLEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354


>gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
 gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
          Length = 375

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 206/353 (58%), Positives = 266/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++RL  LN + +DP LW +  EA+ + RE++ L+ A+  ++E
Sbjct: 11  RIEAALALVRQSLDWERALRRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVRE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D  +++E   +LQ++    +  + ++LLSGEAD ND Y+E+
Sbjct: 71  IGSEMADAIEFVELGEAEGDEDVVKEGLASLQKLADRADADKVQALLSGEADGNDTYIEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA MLLRMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI++SD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINDSDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKN+A A NML+A+L+E E+ +RE  A+    
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KTEIGWG QIRSYVLQPYQMVKDLRT +  +SP DVLDG LD ++ A LA +
Sbjct: 311 EKTEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALAQR 363


>gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193]
 gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193]
          Length = 374

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 197/352 (55%), Positives = 253/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ+L +AI   K 
Sbjct: 11  EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ +  + L+ +K+    K+ E+LL GEADSND +LE+
Sbjct: 71  IKQDLADNIELIELGEMEEDQEVITDAEEALKALKVSAAEKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEI+++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIDVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 310 NKGDAGWGSQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
          Length = 349

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 173/342 (50%), Positives = 242/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD+     RL  +   +E P  W +   A+ L RER+ L++ +  +  +   L D  
Sbjct: 6   GGFFDYPVKKDRLEEVVRLSEAPDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAG 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A EE+D   L     ++  ++ +V   +F  + S  AD ++ +L++ AGAGGTE+
Sbjct: 66  ELFEMAREENDDDTLAAVQADIDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++AE++ FK E LE  +G+ AGIKSA++ I+G  AYG+L+ E GVHRL
Sbjct: 126 CDWASMLLRQYLKYAERKGFKAELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIE+EI+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 186 VRKSPFDSSGGRHTSFASVFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIP+G+VVQCQ +RSQHKN+A+A +ML++KLYE EL+KR+   +  E+ K ++GWG 
Sbjct: 246 RITHIPSGIVVQCQNDRSQHKNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWGH 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 306 QIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 346


>gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223621|sp|A0KNK6|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 365

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+N +  I  
Sbjct: 13  ELSERTELLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDT 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ELA+E +D     E       ++ ++   +F  + SG+ D +D Y+++
Sbjct: 73  LTQGADDVAMLVELAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDPSDCYIDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW +   +K E +E  +G+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+       E 
Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 347

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 176/343 (51%), Positives = 245/343 (71%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD++   QRL  ++   EDP +W +   ++ L +ER+ L+  +  + E+ + L D+
Sbjct: 3   FGGIFDFETKQQRLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDS 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE+D + L     + + ++ +VE  +F  + +   D N+ ++++ +G+GGTE
Sbjct: 63  AELFEMAREENDDATLLGIDADSKALEKQVEEMEFRRMFANPMDGNNCFIDIQSGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+MLLRMY R+ E+R FK E LE  +G+ AG+KSA+L I G  AYG+L+ E GVHR
Sbjct: 123 AQDWASMLLRMYLRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S+ V+P VDDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 183 LVRKSPFDSGNRRHTSFASVSVFPEVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQH+NKA+A NML+A+LY+LEL KR +     E +KT+IGWG
Sbjct: 243 VRITHLPTNTVVQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRTN+E  +   VLDGDLD F+  +L 
Sbjct: 303 HQIRSYVL-DQSRIKDLRTNVEIGNTQGVLDGDLDPFISESLK 344


>gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
 gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
          Length = 367

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 245/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L    D+D   +RL  +N   EDP++W +  +A+ L RE++ LD+ +  +  +
Sbjct: 16  LSVRTVDLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L DN  L E++ EE D   LQ  SD+   ++ +++  +F  + +  AD  +A++++ 
Sbjct: 76  TNGLSDNSELFEMSKEEGDMDGLQSISDDAATLEADIKQLEFRRMFNNPADPLNAFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++AE++ FKT+  +   G+ AGIK AT+ ++G  A+G L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+SI+VYP +DDSIEI+I+ SD R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E S
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364


>gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 368

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 177/352 (50%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ L +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELAALKGGVDTYKGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE D S+  +    L  I   +E  Q E LLSG+ D+NDA L +H
Sbjct: 72  MAKYEDAETLYEMGIEEGDASMEDDIRAELDLIAEGLETLQLEVLLSGDYDANDAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E+ I+  D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG+LD F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGELDPFIRAYLNAK 363


>gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
 gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
          Length = 367

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 179/353 (50%), Positives = 238/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +  +P  W +   A+ ++ E   L + +   + 
Sbjct: 13  KMAKRLAEIRGSLDLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEANALKDLVGEFQS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  + QE     +R+  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFENLEVTYELIKEEPDEDLQQELVTEAKRLTKDFSEFELQLLLNEPYDKNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAGIKS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD IEIEI   + RIDTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++        
Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQKKLEEQQAELAEIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365


>gi|307332073|ref|ZP_07611163.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
 gi|306882296|gb|EFN13392.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
          Length = 830

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 221/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  +L   +   +E+
Sbjct: 473 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 532

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L+ ++  V+  +  +LLSGE DS +A + V 
Sbjct: 533 RGRIDDLEVLFELAADEGDADARAEAESELEAVRKAVDEMEVRTLLSGEYDSREALVNVR 592

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KT+  E    EEAGIKS T  ++ P AYG L 
Sbjct: 593 AEAGGVDAADFAEQLQRMYLRWAERHGYKTQIYETSYAEEAGIKSTTFAVQIPYAYGTLS 652

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 653 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 712

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GES 301
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +    
Sbjct: 713 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 770

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 771 GDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 824


>gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|167710441|gb|EDS21020.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SSC/2]
          Length = 373

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 177/351 (50%), Positives = 235/351 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  L G    +   +R+  L    E+P  W NV E++ +M+E + L   +    +++
Sbjct: 15  QEPLEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLK 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D   L+++A E++D  +++E +  +   +   E  +  +LL+GE D +DA L +HA
Sbjct: 75  TKYEDIETLIDMAEEDEDADLIEEATALMDEFEKTYEELRISTLLTGEYDKDDAILTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA ML RM+TRWA K+ + TE L+  DG+EAGIKS T+ I G NAYG+L+ 
Sbjct: 135 GAGGTESCDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF+S  V P + D IE+EI++ D RIDTYRASGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITH+PTG+VVQCQ ERSQHKNK QA  ML+ KLY L+ Q+  E  +      
Sbjct: 255 NKTDSAIRITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + GWG QIRSYVLQPY MVKD RTN E  +PS VLDGDLD FM A LA  
Sbjct: 315 GDNGWGNQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLAWD 365


>gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
 gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
          Length = 375

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 199/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ L ++I+  K 
Sbjct: 11  EIEKSLELLAQRMNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++++  ++L+ +K     K+ E+LL GEAD+ND +LE+
Sbjct: 71  IKQDLSDNIELIELGEMEEDAEVVKDAEESLKALKERAAEKELEALLDGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ SD R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRVDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRHAEINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAM 361


>gi|217974576|ref|YP_002359327.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
 gi|254790920|sp|B8E5Q1|RF2_SHEB2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217499711|gb|ACK47904.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
          Length = 365

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1]
          Length = 347

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 182/345 (52%), Positives = 244/345 (70%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  +  IK ++  L D
Sbjct: 2   CFGGIFDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+E +D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+GGT
Sbjct: 62  VEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+H
Sbjct: 122 EAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+S
Sbjct: 182 RLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++IGW
Sbjct: 242 AVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 302 GSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 345


>gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987]
 gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus ATCC 10987]
          Length = 380

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 229/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G  D     ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001]
 gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001]
          Length = 367

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 177/350 (50%), Positives = 248/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   L G  D+D+  +RL  +N + EDP +W +   A+ L RE++ LD+ +  +  +
Sbjct: 16  LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L E+A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ 
Sbjct: 76  HNDLRDAQDLFEMAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ 
Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 364


>gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b]
 gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b]
          Length = 375

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 193/353 (54%), Positives = 248/353 (70%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  L     W+ A  RL   N + EDP LW +  +A+ LMR+RQ L +AI+    
Sbjct: 11  EIKTSLELLRQRMGWETARHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHDT 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + DN+ L+EL   E D  ++ E    ++ +  +   K+ E+LL+GEAD+NDA+LE+
Sbjct: 71  IQQEMQDNVELIELGEMEGDPDVVAEAEAAIKALARKAAQKELEALLNGEADANDAFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA+ML RMY RWAE+  +  E      GEEAGIKS T  + G NAYGWL
Sbjct: 131 HAGAGGTESCDWASMLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ +D RIDT+R+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R E       
Sbjct: 251 HVNKTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT++E +    VLDGDLD FM ATLA+ 
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLAMD 362


>gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
 gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
          Length = 376

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 199/353 (56%), Positives = 259/353 (73%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   +  L    DWD A++RL  +N + EDP LW+   EA+ +MRER  L + +  +K+
Sbjct: 11  QIEDSIALLRRHLDWDVALRRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D L L+ELA  E D +       +L     E + ++ ESLLSGEAD  D ++EV
Sbjct: 71  LEQDVKDALELIELAEAEGDGATADAAIADLHSFAAEAKRREIESLLSGEADMRDCFVEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+QDWA MLLRMY RWAEKR +K +  E  +GE+AGIKSAT+ + GPNAYGWL
Sbjct: 131 NAGAGGTEAQDWAQMLLRMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+ +RR TSF+S++V+PV+DD IEIEI+ +D + DT+RASGAGGQ
Sbjct: 191 KTESGVHRLVRISPFDAAARRQTSFASVYVFPVIDDKIEIEINPADLKTDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+S VR THIPTG+V    Q+RSQH+N+  A  ML+A+LYELEL+KREEI    E+
Sbjct: 251 HVNKTESGVRFTHIPTGIVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KT+IGWG QIRSYVL PYQ+VKDLRTN+EK +P  VLDG+LDDFM A LA +
Sbjct: 311 GKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALASR 363


>gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110]
 gi|259585247|sp|C5CUX0|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 367

 Score =  384 bits (987), Expect = e-105,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 244/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L    D+D   +RL  +N   EDP++W +  +A+ L RE++ LD+ +  +  +
Sbjct: 16  LSARTADLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ E+ D   LQ  +D+   ++ +++  +F  + +  AD  +A++++ 
Sbjct: 76  TSGLSDNTELYEMSKEDGDMDGLQSIADDAAALETDIKQLEFRRMFNNPADPLNAFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++AE++ FKT+  +   G+ AGIK AT+ ++G  A+G L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+SI+VYP +DDSIEIEI+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E S
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364


>gi|218900306|ref|YP_002448717.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
 gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
          Length = 380

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  +  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEVTHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
 gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
          Length = 366

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 229/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++++         D   + ++    +  +P  W N   A+ L+ E   L        +
Sbjct: 12  EMTQKITSFRRSLCLDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEKYQQFHQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + + L +  ++ EL  EE D  I +E  + +  ++  +   +   LL+   D N+A +E+
Sbjct: 72  LSEELDELTVMFELQQEEYDAEIQEELEERIHLLQERLTTYELSLLLNEPYDHNNALIEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAE   F+ E L+   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS  RRHTSF S+ V P +DD+IEI I+  D +IDTYRASGAGGQ
Sbjct: 192 KSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SAVRITHIPTG VV  Q +RSQ KN+ QA +ML+AKLY+LE++K+ + A     
Sbjct: 252 HINKTESAVRITHIPTGTVVASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  +
Sbjct: 312 EQMEIGWGSQIRSYVFHPYSMVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQR 364


>gi|163731562|ref|ZP_02139009.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
 gi|161395016|gb|EDQ19338.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
          Length = 374

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 200/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L    D + A  RL   N + EDP LW +   A+ LMR+RQ L +A++    
Sbjct: 11  KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN+ L+EL   EDD  ++ +  + L+ ++     K+ E+LL GEADSND +LEV
Sbjct: 71  IKQEMADNIELIELGEMEDDADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWANML RMY RWAEK+ +K E   + DG+EAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWANMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+I+++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIDVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+ 
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362


>gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
 gi|224955151|gb|EEG36360.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
          Length = 371

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 165/350 (47%), Positives = 234/350 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              +  LG      +  +++  L ++  +   W +  +A+ + R+ ++L + +S    ++
Sbjct: 15  KEPMKELGVSLALSHKHEQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHALE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   ++EL  EE+D S++ +  + L   ++E +  + ++LLSGE D N+A + +HA
Sbjct: 75  LTLDDVSTMIELGNEENDASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA ML RMY++WA+   FKTE L+  DG+EAGIKS T  + G NAYG+LK 
Sbjct: 135 GAGGTESCDWAGMLYRMYSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF+S  V P +++ + +EI++ D RIDTYRASGAGGQH+
Sbjct: 195 ERGVHRLVRISPFNAAGKRQTSFASCDVMPDIEEDLSVEIADEDIRIDTYRASGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITHIPTGVVVQCQ ERSQHKNK +A  ML+AKLY ++ Q+  E  +      
Sbjct: 255 NKTDSAIRITHIPTGVVVQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRGEV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++ GWG QIRSYV+QPY MVKD RT  E  +   V+DG+LD FM A L  
Sbjct: 315 SDNGWGNQIRSYVMQPYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYLRW 364


>gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
          Length = 347

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 175/342 (51%), Positives = 235/342 (68%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   + +  +  +  DP  W ++ +++ L ++++ L   +   + +  R  D   L
Sbjct: 3   LFDVEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL LEE D SI +E     + +K EVE  +  +LLSG  D N+A L +HAG+GGTE+QD
Sbjct: 63  IELGLEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQD 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWA  + F+ E L+  +GEEAGIKSATLLIKGP AYG+LKGE GVHRLVR
Sbjct: 123 WAEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRLVR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+ + V P ++D IEIEI   D +IDT+RASGAGGQHVN T+SAVRI
Sbjct: 183 ISPFDAAGRRHTSFALVEVIPELEDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++R+E     +    E  WG QI
Sbjct: 243 THLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDLKGEHREAAWGNQI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RSYV QPY +VKD RTN E+ + + V+DG++D F+ A L  K
Sbjct: 303 RSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQK 344


>gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 371

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 217/352 (61%), Positives = 264/352 (75%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R    L    +WD A+ RL  LN   E+P LW +   A+ +MRER  LD+AI   + +
Sbjct: 12  IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGCRAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D + L+EL   E D +++ +  + ++ +K      + E+LLSGEAD ND Y+E++
Sbjct: 72  ERELADLIELIELGEMEGDQTVIDDAEEQIRAVKERAAKMELETLLSGEADHNDCYMEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA MLLRMYTRWAEK  +K E LE   GE+AGIKSAT+ I G NAYGWLK
Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I+I+ES+CRIDTYRASGAGGQH
Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDSIDIQINESECRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E  
Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363


>gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
 gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
          Length = 351

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 184/347 (53%), Positives = 246/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ IK ++  L
Sbjct: 4   LRCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+G
Sbjct: 64  EDVDGLLELAIEAEDEDTFHEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RW E + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 124 GTEAQDWTEMLLRMYLRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|308187994|ref|YP_003932125.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
 gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
          Length = 351

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  ++++   L D 
Sbjct: 7   FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 67  QGLLELAVEAEDEETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349


>gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1]
 gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp.
           PRwf-1]
          Length = 325

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 172/324 (53%), Positives = 226/324 (69%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P LW +   A  + +E+  LD  I+ I  +   L D   +LELA+E DD  +L+E  
Sbjct: 1   MASPELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +  VE  +F+ +  GE D+N+ ++++ +G+GGTE+QDWA MLLRMYTRW E   
Sbjct: 61  NELNAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E +E+  G  AG+KSA+  + G  A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++
Sbjct: 121 FKVEIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V P +DD  EI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PTG VVQCQ ERSQ
Sbjct: 181 FVSPEIDDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NKA A  MLRAKLYELE+QKR E     E +K+++GWG QIRSYVL     +KDLRT 
Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWGSQIRSYVLDDS-RIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323


>gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18]
 gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18]
          Length = 371

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 246/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L GLFD D+  +R+  L+  T  P  W +   A+ +++ R  ++  ++  + +
Sbjct: 12  LVERIDKLRGLFDVDDKKERMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L+EL  EE+D + L E +     ++  V   +F  +LSG  D++ A++ ++
Sbjct: 72  DRQARDIRELIELGSEEEDEATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY R+ EK+ ++TE  +  +G+ AGIK  T    G  AYG+LK
Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241
            + G+HRLVRISP+DS++RRHTSF+S++V+PV+ ++ IE++I+ESD RIDTYR+SGAGGQ
Sbjct: 192 ADAGIHRLVRISPFDSSARRHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RITH+PTG+VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+    
Sbjct: 252 HVNTTDSAIRITHLPTGIVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+   L 
Sbjct: 312 EKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALDDFVVPFLM 362


>gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11]
 gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11]
          Length = 374

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 201/351 (57%), Positives = 252/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    DW+ A  RL   N + EDP+LW +   A+ LMRERQ L +AI   K I
Sbjct: 12  IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   EDD  ++++  + L  +K +   K+ E+LL GEADSND +LE++
Sbjct: 72  KQELADNIELIELGEMEDDNEVVKDAEEALVALKEKAAEKELEALLDGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ +D R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPADIRVDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1]
 gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 376

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 215/353 (60%), Positives = 274/353 (77%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L    D D +  RL+ LN   EDP LW +  +A+ LM+ER  L+++++ I +
Sbjct: 11  EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTGIGK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L DN+ ++EL   E D  I++E  D L+ +K EV  ++ E+LLSGEAD  D YLEV
Sbjct: 71  VERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMY RWAEK  FK E LE  +GEEAGIKSAT+ I G NAYGWL
Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+ESD R+DT R+ GAGGQ
Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAESDVRVDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LYE+EL+KREE A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+FM ATLA +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363


>gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
 gi|123631202|sp|Q47WT4|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
          Length = 365

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + N L G  D+D   +RL  ++ + E P +W     A+ L +ER  L+  ++ I E
Sbjct: 13  EIRERANLLRGYLDYDVKAERLVEVSRELELPDVWNEPERAQALGKERSSLEEVVNTIVE 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   L+ELA+EE D     +       +   +E  +F  + SGE D+N++YL++
Sbjct: 73  LETGCEDIEGLVELAVEESDQETFDDAEVEADALDKVLEKLEFRRMFSGEQDANNSYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWA ML+RMY RW E   +KTE +E+ DG+ AGIK  T+   G  AYGWL
Sbjct: 133 QSGSGGTEAQDWAEMLMRMYLRWGEAHGYKTEVIEVTDGDVAGIKGCTIKYTGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+IEI+I+ +D RIDT+RASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIEIDINPADLRIDTFRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITH PTG VV CQ +RSQHKN+A A  +L+AKLYE+E+QK+     + E 
Sbjct: 253 HVNKTDSAIRITHEPTGAVVACQADRSQHKNRATAMKLLKAKLYEMEMQKQNSDKQVLED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 GKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFLEASLK 362


>gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera sp. 301]
 gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera sp. 301]
          Length = 351

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 174/345 (50%), Positives = 241/345 (69%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG+FD++   QRL  +N   EDP +W +  +++ L +E++ L+  +  ++ ++  L 
Sbjct: 5   TTLGGIFDFETKSQRLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLN 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  L E+A EE+D   L     + Q ++ +V   +F  + SGE DSN+ ++E  +G+GG
Sbjct: 65  DSRELFEMAREENDDDTLLSVDVDSQAVEKQVAEMEFRRMFSGELDSNNCFIEFQSGSGG 124

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY R+ E++ FK E LE  DG+ AGIK A++ + G  AYG L+ E GV
Sbjct: 125 TEAQDWAAMLLRMYLRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGV 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN++RHTSF+S+ ++P VDDSI+I+I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 185 HRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTD 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VVQCQ +RSQH+N+ +A NML+  LY LEL KR       E +KT+IG
Sbjct: 245 SAVRITHLPTNTVVQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIG 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E  +   VLDGDLD F++ +L 
Sbjct: 305 WGHQIRSYVL-DQGRIKDLRTNVEIGNTQGVLDGDLDPFIQVSLK 348


>gi|315268921|gb|ADT95774.1| Peptide chain release factor 2 [Shewanella baltica OS678]
          Length = 365

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 234/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G  D+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGYLDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
 gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
          Length = 375

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 210/353 (59%), Positives = 265/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L+ L    DWD A++RL  LN + EDP LW N  +A+ +MRER  LD AI   + 
Sbjct: 11  RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I     D   L+E+A  E D  ++ E   +L+ +    +  + ++LL+GEAD++D YLE+
Sbjct: 71  IDSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363


>gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
 gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
          Length = 367

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166]
          Length = 370

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 185/345 (53%), Positives = 244/345 (70%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +  GG+FD+D    RL  +N + EDP++W     A+ L RER  L   +  I ++   L 
Sbjct: 24  SQFGGIFDYDQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLA 83

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  LLE+A EE+D   + +    ++R++  +E  +F  + S E D N+ YL++ AG+GG
Sbjct: 84  DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGG 143

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWAN+LLRMY RWA+KR F  E +E+ +GE AGIK AT+ IKG  A+GWL+ E GV
Sbjct: 144 TEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 203

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 204 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 263

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IG
Sbjct: 264 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 323

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L 
Sbjct: 324 WGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDGYLEASLK 367


>gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 417

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 168/350 (48%), Positives = 237/350 (67%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 66  LEQRSAAIRSYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKLLEGVVLTLDNI 125

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 126 GGGIEDNRMLIEMAVEENDEDGFAAIESDVAELESQMAGLEFKRMFNQPADHNNCFVDIT 185

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E +E  DGE AGI  ATL ++G  AYG L+
Sbjct: 186 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLEIIEEDDGEIAGINRATLRVEGEYAYGLLR 245

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH
Sbjct: 246 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 305

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQ Q  RSQH+N+     MLR+KL+ELE++KR E     E  
Sbjct: 306 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 365

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K ++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 366 KADVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 414


>gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102]
 gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102]
          Length = 367

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEDG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|307729220|ref|YP_003906444.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
 gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
          Length = 367

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 178/350 (50%), Positives = 249/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   L G  D+D+  +RL  +N + EDP +W +   A+ L RE++ LD+ +  +  +
Sbjct: 16  LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L E+A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ 
Sbjct: 76  DNDLRDTQDLFEMAREEGDDETLLACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ 
Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 364


>gi|307294100|ref|ZP_07573944.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
 gi|306880251|gb|EFN11468.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
          Length = 375

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 209/353 (59%), Positives = 264/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L+ L    DWD A++RL  LN + EDP LW N   A+ +MRER  L+ AI   + 
Sbjct: 11  RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I     D   L+E+A  E D  ++ E   +L+ +    +  + ++LL+GEAD++D YLE+
Sbjct: 71  IDSEKTDTAELIEMADAEGDEDMVTEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363


>gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
 gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
          Length = 375

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 198/351 (56%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ L  L    D++    RL   N  TEDP+LW +  +A+ LMR+RQ L +A +   ++
Sbjct: 12  INKSLALLRQRMDFETVPHRLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAYNNYNKL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L+ +      K+ E+LL+GEADSND +LE++
Sbjct: 72  AQDLADNVELIELGEMEDDEDVVAEAEAGLRSVVEIAAKKELEALLNGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWANML RMY RWAE R +K E      GEEAGIKSA   I G NAYGWLK
Sbjct: 132 SGAGGTESCDWANMLARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSFSSIWVYPVVDD+I+IE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSIWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAL 361


>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
           propionicus DSM 2032]
          Length = 369

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 177/352 (50%), Positives = 238/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D D   +++  L  +T  P+ W N  EAK + R+   L + I   ++ 
Sbjct: 17  LKGKMLVLKEHLDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDLIGVWEKN 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +LL++A EE+D    QE    L  ++  VE  + E + SGE D+N+A L +H
Sbjct: 77  FGDLEDAEMLLDMAREENDQDTYQEVVSGLDDLRRRVELVELECMFSGEHDANNAILTIH 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  +LLRMY RWAE + FK + L++  G+EAG KS T+++KG  AYG+L+
Sbjct: 137 AGAGGTEAQDWVGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLR 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D++ RRHTSF+S+ V P +DD +EIEI++ D RIDTYRASG+GGQH
Sbjct: 197 SEVGIHRLVRISPFDASGRRHTSFASVMVMPELDDDVEIEINDKDIRIDTYRASGSGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH PTG+VVQCQ ERSQH NKA A  ML A+LYE E ++++      +  
Sbjct: 257 VNKTDSAIRITHFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGD 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EI WG QIRSYVLQPY+++KD RTN E+ +   VLDG LD F+KA L  +
Sbjct: 317 KKEIAWGSQIRSYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYLLWQ 368


>gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
 gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
          Length = 351

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 157/338 (46%), Positives = 229/338 (67%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+  +++  L+   E+P  W +  E+  ++RE + L + +    +++    D  +L+E+ 
Sbjct: 2   DSKEKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMG 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE+D S++ E    L+    E++  +  +LL+GE DS++A ++++AGAGGTES DW +M
Sbjct: 62  YEENDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMYTRWA K  +  + L+I +G+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+
Sbjct: 122 LYRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  +R TSF S  + P +++ ++++I+  D RIDTYR+SGAGGQH+N T SA+RITHIP
Sbjct: 182 NAAGKRQTSFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIP 241

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TGVVVQCQ ERSQ +NK +A  ML+AKL+ L+ Q   E  +       +IGWG QIRSYV
Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYV 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +QPY MVKD RT  E  + + V+DGD+D F+ A L  +
Sbjct: 302 MQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ 339


>gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 375

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 205/353 (58%), Positives = 261/353 (73%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DWD AV+RL  L+ + EDP LW +  +A+ +MRER+ LD AI  +K+
Sbjct: 11  RIEGALALIRKFLDWDRAVRRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAIGTVKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D   + E    L  +    +  + ++LL+GEAD+N+A+LEV
Sbjct: 71  IGQEMADAIEFVELGEMEGDEDTVAEGLATLAALAERADADKVQALLAGEADANNAFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMYTRWAE+  +K E ++ H GE AGIK  TLLIKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+I+IEI+ +D ++DTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIDIEINPADLKVDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V  Q +RSQHKN+A A  MLRA+LYE EL KRE  A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ VKDLRT +  T+P++VLDG LD FM A L+ +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363


>gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915]
 gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915]
          Length = 375

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 221/353 (62%), Positives = 286/353 (81%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + ++ L    DWD AV+RL +LN + EDP LW +  EA+ LMRERQ L+++I+ I  
Sbjct: 11  EIQQAISLLRRHLDWDQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINH 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q + LLSGEAD+ND YLEV
Sbjct: 71  LKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGIKSAT+L+KG N+YG L
Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGML 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE  +   +
Sbjct: 251 HVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  FM+A LA +
Sbjct: 311 TKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 363


>gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114]
 gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114]
          Length = 367

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRIYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
 gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
          Length = 342

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 231/329 (70%), Positives = 282/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL   E D  I+
Sbjct: 1   MNNKAEDPTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           ++  D L+ ++ E   +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KDAEDALKALRSEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ FK E LEIHDG+EAGIKSAT+L+KG NA+GW+K E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGFKVEVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ
Sbjct: 181 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE+ELQKREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +E T+P +VLDGDL++FM+A LA +
Sbjct: 301 LRTGVESTAPGNVLDGDLNEFMEAALAHR 329


>gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2654]
          Length = 375

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 198/352 (56%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L     W+ A  RL  LN  TEDP LW +   A+ LMRERQ L   +   K +
Sbjct: 12  IEKSLALLRQRIGWETAEHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKAM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D++ L+EL   EDD  ++++    L+ +K      + E+LL+GEAD ND +LEVH
Sbjct: 72  EQEKNDSVELIELGEMEDDDEVVKDAEAALKALKERAAAAEIEALLNGEADPNDTFLEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA+ML RMY RWAE   +K E      GEEAGIKSAT  I G NAYGWLK
Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IE+E++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEVEVAPNDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY++EL +R +  N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD  M ATLA+ 
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLAMD 362


>gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 354

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 176/344 (51%), Positives = 244/344 (70%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E P +W +   A+ L RER  L+  +   + +   L D 
Sbjct: 10  LGGIFDYDLKRERLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDA 69

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLE+A +E D   +     +L   + E++  +F  + SGE D  +A++++ AGAGGTE
Sbjct: 70  DELLEMAADEGDEETVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTE 129

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RW E+  FKTE +E+ +G+EAGIKSAT+  +G  A+GWL+ E G+HR
Sbjct: 130 AQDWANMLLRMYLRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHR 189

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++V P VDD ++I+I+ +D R+D YRASGAGGQHVN T+SA
Sbjct: 190 LVRKSPFDSGNRRHTSFASVFVSPEVDDDVDIDINPADLRVDVYRASGAGGQHVNRTESA 249

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+P+G+VVQCQQ+RSQHKN+A A   L++KL+ELE+QKR + A   E +K++IGWG
Sbjct: 250 VRITHMPSGIVVQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWG 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 310 NQIRSYVL-DQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLKA 352


>gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [marine bacterium HP15]
          Length = 351

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 183/347 (52%), Positives = 244/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD+D   +RL  +  + E P +W +   A+ L +ER  L+  +  I  +   L
Sbjct: 4   LKRSGGIFDYDQRSERLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTSGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LL++A EE+D   + E   +L+ +  E+E  +F  + SGE D+N+AYL++ AG+G
Sbjct: 64  EDAEGLLDIAAEEEDEGTVAEIESDLEGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWANMLLRMY RWAE+R FK E +E+ +GE AGIKSAT+ I+G  AYGWL+ E G
Sbjct: 124 GTEAQDWANMLLRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T
Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q+R       E +K +I
Sbjct: 244 ESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 366

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS ++  L    D       +  L+     P  W +  +A+ + R++  L +++S   E
Sbjct: 11  ELSGRVADLRVSLDIAGKESEIEKLDKLMMAPGFWDDQAQAQKISRQQAVLKDSVSLYGE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D  +L ELA EEDD   L+ET+ +L++++L V   + + LLSGE D  +A + +
Sbjct: 71  LRQSLEDLEVLAELAQEEDDDIALRETAKDLKQLELRVSELELDVLLSGEYDRGNAIISL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  MLLRM+TRWAE  +++   L++  G+EAGIKS T+ I GPNA+G+L
Sbjct: 131 HAGAGGTEAQDWVEMLLRMFTRWAEDHRYRVIVLDMLSGDEAGIKSVTVEIVGPNAFGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+  RRHTSF+S+ V P VD+ ++IEI   D +IDT+RA GAGGQ
Sbjct: 191 KSEKGVHRLVRISPFDTAGRRHTSFASVEVLPEVDEDVDIEIKTEDLKIDTFRAGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV CQ ERSQ  N+  A  +L+AKL ELELQK+E        
Sbjct: 251 HVNKTDSAVRITHLPTGIVVSCQNERSQLSNRNSAMKLLKAKLAELELQKKEAEMASLRG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              EI WG QIRSYV  PY +VKD RT  E  +   V++G+LD FM A L  +
Sbjct: 311 DHQEIAWGSQIRSYVFHPYSLVKDHRTGAETGNIEAVMNGELDKFMAAFLLWQ 363


>gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187]
          Length = 380

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|331701705|ref|YP_004398664.1| peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129048|gb|AEB73601.1| Peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 373

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + ++  G   D D   + ++   +K  +P  W +   A+ L+ +   L         
Sbjct: 14  EMQKAIDGFGRSLDLDALSESIAINESKMAEPGFWDDQEAAQKLIDQTNQLKTKRDNFVG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++L D  + LEL  E+    +  E   + +++K +++  Q   LL+G+ D N+A LE+
Sbjct: 74  LKNKLDDLKVTLELIEEDSHSGMEGEFETDEKQLKTKLDRYQLNLLLNGKYDHNNAILEI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE+QDW +MLLRMYTRWAE   F  + L+   G+ AG+ S +LLI G NAYG+L
Sbjct: 134 HPGAGGTEAQDWGSMLLRMYTRWAEAHGFTVQTLDYQVGDVAGLNSVSLLISGENAYGYL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G+HRLVR+SP+DS  RRHTSF+S+ V P ++D + I+I+  D RID YR+SGAGGQ
Sbjct: 194 RSEKGIHRLVRLSPFDSAGRRHTSFASVDVMPELNDDVSIDINPDDLRIDVYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVRITH+PTG+V   Q +RSQ +N+  A NML++KLYELE +K+ E     E 
Sbjct: 254 HINKTSSAVRITHLPTGIVAASQAQRSQLQNRQTAMNMLKSKLYELEEEKKAEEKAKIEG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +IGWG QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L  +
Sbjct: 314 EQKDIGWGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 366


>gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
 gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
          Length = 375

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP+LW N   A+ LMRERQ L +A+   K I
Sbjct: 12  IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   EDD  ++++    L+ ++     K+ E+LL GEAD ND +LE++
Sbjct: 72  ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYD+ ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDG LD FM ATLA+K
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAMK 362


>gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
 gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
          Length = 326

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 169/323 (52%), Positives = 219/323 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E   L +A++    + +   +  +  EL  EE D  + +E  
Sbjct: 1   MSDPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  +D I I+I   D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML++KLY+LE++K++E        + +IGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   V+DGDLD F+ A L 
Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323


>gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275]
 gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
 gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
          Length = 367

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2]
 gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas
           naphthalenivorans CJ2]
          Length = 347

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 166/342 (48%), Positives = 240/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    ++L+ +N   EDP +W N   A+ L RE++ L++ +  +  ++  L DN 
Sbjct: 4   GGIFDYPAKARKLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNT 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ +++D + ++       ++  EVE  +F  + +  AD  + +L++ AGAGGTE+
Sbjct: 64  ELFEMSKDDNDEAGMRAIEGEAAKVAAEVEKMEFRRMFNNPADPLNCFLDIQAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++AE++ FKT   +   G+ AGIK AT+ I+G  A+G L+ E GVHRL
Sbjct: 124 CDWASMLLRQYLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP +DDSIEI+I+ +D R DTYRASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQCQ+ RSQH N+  AW  LR++LY+ EL+K++E     E +KT++GWG 
Sbjct: 244 RLTHIPTGIVVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTN E ++   VLDGDLD F++A+L 
Sbjct: 304 QIRSYVL-DNSRIKDLRTNYETSATQKVLDGDLDPFIEASLK 344


>gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
 gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
          Length = 351

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 183/347 (52%), Positives = 245/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD+D   +RL+ +  + E P +W++   A+ L +ER  L+  +S I  +   L
Sbjct: 4   LKRSGGIFDYDQRSERLTEVERELEMPSVWEDPERAQSLGKERSDLELIVSTIDRLTSGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLE+A+EEDD + + +  ++L  +   +E  +F  + SGE D N+AYL++ AG+G
Sbjct: 64  TDAEGLLEMAVEEDDEATVADIGNDLAEMDANLEKLEFRRMFSGEMDPNNAYLDIQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AGIKSATL I+G  A+GWL+ E G
Sbjct: 124 GTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGIKSATLHIQGDYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSFSS++V P VDDS  IEI+ +D R+D YRASGAGGQHVN T
Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVNRT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q R       E SK++I
Sbjct: 244 ESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEHEMQARNAEKQKLEDSKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187]
 gi|259585231|sp|C4LCN9|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187]
          Length = 365

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 169/351 (48%), Positives = 232/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  ++ + E P +W     A+ L +ER  L++ ++ I  
Sbjct: 13  ELSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ LA+E +D     E       ++ ++   +F  + SG+ D++D Y+++
Sbjct: 73  LTQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRRMFSGQHDASDCYMDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWA+M+LRMY RW E   +K E +E  DG+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S +VYP +D+ +EIEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT  V QCQ +RSQHKNK QA   L+AKLYELE+ K+       E 
Sbjct: 253 HVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 TKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLK 362


>gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH187]
          Length = 380

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
 gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
          Length = 367

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. 'Ames Ancestor']
          Length = 365

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G  D     ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 12  KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 72  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364


>gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
 gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
          Length = 326

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 169/323 (52%), Positives = 219/323 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E   L +A++    + +   +  +  EL  EE D  + +E  
Sbjct: 1   MADPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  +D I I+I   D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML++KLY+LE++K++E        + +IGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   V+DGDLD F+ A L 
Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323


>gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090]
 gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945]
 gi|239999963|ref|ZP_04719887.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18]
 gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140]
 gi|240081863|ref|ZP_04726406.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|240114140|ref|ZP_04728630.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|240116780|ref|ZP_04730842.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|240119007|ref|ZP_04733069.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1]
 gi|240122455|ref|ZP_04735411.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|240126695|ref|ZP_04739581.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|240127168|ref|ZP_04739829.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|260441572|ref|ZP_05795388.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|75432344|sp|Q5F5H5|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238693228|sp|B4RQU4|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA
           1090]
 gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945]
 gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 367

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +E + L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKESKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMAVEENDEEGFAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1]
 gi|123541518|sp|Q2W3F8|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1]
          Length = 371

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 216/352 (61%), Positives = 263/352 (74%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R    L    +WD A+ RL  LN   E+P LW +   A+ +MRER  LD+AI   + +
Sbjct: 12  IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGCRAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L+EL   E D +++ +  + ++ +K      + E+LLSGEAD ND Y+E++
Sbjct: 72  ERELADLAELIELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYMEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA MLLRMYTRWAEK  +K E LE   GE+AGIKSAT+ I G NAYGWLK
Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS WVYPV+DD+I+I+I+ES+CRIDTYRASGAGGQH
Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDTIDIQINESECRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E  
Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363


>gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
 gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
          Length = 361

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 161/349 (46%), Positives = 227/349 (65%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +L+ +GGLFD D   + ++    +  +P  W +  +A  ++++   L +      +++ 
Sbjct: 2   SKLSAIGGLFDLDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMEL 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +L E+  EE D  +  E  + +Q ++ +++  +   LL+G  D N A LE+H G
Sbjct: 62  AHEETSLLFEMYKEEPDEEVHAEIVEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPG 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTESQDW +MLLRMY RWAEK  ++ E ++  DG+EAGIKS TL I+G NAYG+L+ E
Sbjct: 122 AGGTESQDWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHRLVRISP+D+  +RHTSF S+ V P +D  I+IEI+  D ++D YRASGAGGQH+N
Sbjct: 182 KGVHRLVRISPFDAAGKRHTSFCSVDVVPQMDGDIDIEINPDDLKVDVYRASGAGGQHIN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVRITHIPTG+V Q Q +RSQ KN+ QA  ML+AKL++LE +K+          + 
Sbjct: 242 KTSSAVRITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQK 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +I WG QIR+YV  PY MVKDLR+  E  +   V+DGDLD FM A L  
Sbjct: 302 DIAWGSQIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYLKW 350


>gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
 gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
          Length = 380

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
 gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
          Length = 352

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 166/344 (48%), Positives = 224/344 (65%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q  + D 
Sbjct: 3   LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGTE
Sbjct: 63  DATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           LVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+S
Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          + EIGW
Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L 
Sbjct: 303 GSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346


>gi|160876721|ref|YP_001556037.1| peptide chain release factor 2 [Shewanella baltica OS195]
 gi|160862243|gb|ABX50777.1| peptide chain release factor 2 [Shewanella baltica OS195]
          Length = 352

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 174/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 349


>gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4]
 gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4]
          Length = 344

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 230/329 (69%), Positives = 280/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           LN K EDP+LW +  EA+ LMRERQ L+++I+ ++ ++ ++ DN+ L+E+  EE D SI+
Sbjct: 4   LNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDESIV 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E    Q E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 64  KEAEDGLKALKAESGKLQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK E LE+HDGEEAGIKSAT+L+KG NAYGW+K E GVHRLVRISPYDSN+RRHTS
Sbjct: 124 ERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIP+G+ V CQQ
Sbjct: 184 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIAVSCQQ 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKNKA+AW+MLRA+LYE+EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 244 ERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +E T+P DVL+GD+  FM+A LA +
Sbjct: 304 LRTGVESTAPDDVLNGDISPFMEAALAHR 332


>gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|166225113|sp|A1KWK6|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153]
 gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
           8013]
 gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
 gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
          Length = 367

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|24638158|sp|Q9JWV4|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
           2594]
          Length = 367

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756]
 gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 373

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 209/352 (59%), Positives = 255/352 (72%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    DWD A+++L  LN + EDP LW    EA+ + RER  L   +  ++ I
Sbjct: 12  IEQSVGLLRRRLDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERAALAAKVEAVQSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D +   ELA  E D   L +    L+ +K      + E+LLSGEAD NDAY+E++
Sbjct: 72  ERDLKDAVEYAELADMEGDEESLNDARVQLKALKDRAGRAELEALLSGEADGNDAYIEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA +LLRMYTRWA     +TE +E  DG++AGIKSATLL+KGPNAYGWLK
Sbjct: 132 SGAGGTESCDWAGILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ +D R DTYRASGAGGQH
Sbjct: 192 TEAGVHRLVRISPYDSSARRHTSFASAWVYPVVDDTIEIEINPADVRTDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQKRE      E  
Sbjct: 252 INKTDSAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALAQR 363


>gi|163739752|ref|ZP_02147160.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
 gi|163741027|ref|ZP_02148420.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386018|gb|EDQ10394.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386982|gb|EDQ11343.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
          Length = 374

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 202/351 (57%), Positives = 251/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +AI   K I
Sbjct: 12  IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   E+D  ++ +    L+ +K +   K+ E+LL GEADSND +LE++
Sbjct: 72  KQDLSDNMELIELGEMEEDAEVISDAEAALKTLKEKAAEKELEALLDGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 252 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNADINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
          Length = 352

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 166/344 (48%), Positives = 224/344 (65%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q  + D 
Sbjct: 3   LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGTE
Sbjct: 63  DATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           LVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+S
Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          + EIGW
Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L 
Sbjct: 303 GSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346


>gi|145297980|ref|YP_001140821.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223622|sp|A4SJK1|RF2_AERS4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|142850752|gb|ABO89073.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 365

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 176/351 (50%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G FD+D   +RL  +N + E P +W     A+ L +ER  L+N +  I  
Sbjct: 13  ELSERTELLRGYFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVSLENVVGTIDV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ LA+E +D     E       ++ ++   +F  + SG+ D +D Y+++
Sbjct: 73  LTQGAEDVEMLVSLAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDGSDCYIDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW +   +K E +E+ DG+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIELSDGDVAGIKSATVKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+       E 
Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217]
 gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217]
          Length = 375

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 199/352 (56%), Positives = 247/352 (70%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L     W+ A  RL   N + EDP LW +   A+ LMRERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L DNL L+EL   E+D  ++ E    ++ +      K+ E+LL GEADSND +LE+
Sbjct: 71  LKQELEDNLGLIELGEMENDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV   Q +SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQQELDRRNAAINEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD+FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361


>gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
 gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
          Length = 375

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 192/353 (54%), Positives = 251/353 (71%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L+ L    +WD A  RL   N + EDP LW +   A+ LMR+RQ L +AI+  + 
Sbjct: 11  EIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASYEA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D++ L+E+   EDD  ++ E  D L+ +  +   K+ E+LL+GEAD+ND +LE+
Sbjct: 71  IRQELSDHVELIEMGEMEDDAGVVTEAEDGLKVLAAKAAEKELEALLNGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTE+ DWA ML RMY RWAE++ +K E      GEE GIKSA+  I G NAYGWL
Sbjct: 131 NSGAGGTEACDWAAMLARMYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++E+ KR  + N    
Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIEMDKRSALVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+ 
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362


>gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
 gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
          Length = 352

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 1   MEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 61  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 121 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 181 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 241 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 301 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 349


>gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
 gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
          Length = 367

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002]
 gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
          Length = 367

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 176/350 (50%), Positives = 249/350 (71%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++ + L G  D+D+   RL  +N + EDP +W +   A+ L +E++ LD+ +  +  I
Sbjct: 16  LRKRADDLRGYLDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + D   L ++A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ 
Sbjct: 76  TNDVNDAQDLFDMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIK+AT+ I+G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ 
Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 364


>gi|302342486|ref|YP_003807015.1| LigA [Desulfarculus baarsii DSM 2075]
 gi|301639099|gb|ADK84421.1| LigA [Desulfarculus baarsii DSM 2075]
          Length = 371

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 174/353 (49%), Positives = 235/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L  +    D ++  +RL+ L+        W++   AK +MRER  L  ++  +  
Sbjct: 7   ELRQRLGVIQEYLDPESKTKRLAELDKIVGANDFWEDQNAAKAVMRERTDLAQSLEELDA 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D  +LLELA+EEDD S+  E       ++ ++   +   LL G  D   A L +
Sbjct: 67  LNRSMEDAEVLLELAVEEDDASLTAEIDQAHDALERQIGRLEAARLLGGPDDHRGAILAI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGG ++QDWA ML R+Y R+AE++ F+   L+   G+EAG+KS T+ I GP AYG L
Sbjct: 127 NAGAGGADAQDWAQMLTRLYGRYAERQGFQVVELDFQAGDEAGVKSVTMEINGPRAYGLL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D++ RRHT+F+S++V P VDD IEIE+ ++D RIDTYRASGAGGQ
Sbjct: 187 KGESGVHRLVRISPFDASHRRHTAFASVYVSPQVDDDIEIEVKDADIRIDTYRASGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVRITH PTGVVVQCQ E+SQH+NK  A  +LRA+LYELE+ KRE       +
Sbjct: 247 HVNKTSSAVRITHFPTGVVVQCQNEKSQHRNKDMAMKVLRARLYELEIHKREAEKREVHA 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           S  EI WG QIRSYVL PY++VKD RT +E  +   VLDG LDDF++  L  +
Sbjct: 307 SHQEIAWGSQIRSYVLAPYRLVKDHRTGVEVGNVDSVLDGQLDDFIQGYLLWR 359


>gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
 gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
          Length = 367

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
 gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
          Length = 367

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
 gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
          Length = 372

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 230/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + +  +    D DN  +R+  L    E P  W N  +++  M+E + L +A     E++
Sbjct: 15  DKPMAQIKKSLDLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   L+E+A E +D S++ E  + +  ++ ++E  + E+LLSGE D+ DA L +HA
Sbjct: 75  TGLDDVKTLIEMAEESNDQSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DW  ML RMYTRWAE   + TE L+  +GEEAGIKS T+ I+G NAYG LK 
Sbjct: 135 GAGGTESCDWCQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+++  +R TSF S  V P ++  I+IEI++ D RIDTYR+SGAGGQH+
Sbjct: 195 EHGVHRLVRISPFNAAGKRQTSFVSCDVMPDINQDIDIEINDDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH+PTG+VVQCQ ERSQH+NK +A  ML+AKLY L+  +  E  +      
Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +I +G QIRSYVLQPY MVKD RTN E  +   VLDG++D F+ A L  
Sbjct: 315 KDINFGSQIRSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLTW 364


>gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
 gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
          Length = 364

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L G  D++   +RL  ++ + EDP +W +   A+ L +ER  L+  +  I ++
Sbjct: 13  IKERTEALRGFLDYETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LL++A+EEDD   + E   ++  +   ++  +F  + +GEAD N+A+L++ 
Sbjct: 73  TAGVADTRDLLDMAVEEDDEDTVAEVESDVTAMLDRLQQLEFRRMFAGEADPNNAFLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA M+LRMY RW E + FKTE LE   G+ AGIKSAT+  +G  A+GWL+
Sbjct: 133 AGSGGTEAQDWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS++V P +DD+I+IEI+ +D R+D YRASGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDDNIDIEINPADLRVDVYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH P+G+VVQ Q +RSQH+NK      LRAKLYE+E+ KR E A   E +
Sbjct: 253 VNRTESAVRITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQEDN 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +IGWG QIRSYVL   Q +KDLRT ++ ++   VLDGDLD F++A+L  
Sbjct: 313 KADIGWGSQIRSYVLDD-QRIKDLRTGVQSSNCDKVLDGDLDMFIEASLKA 362


>gi|308048394|ref|YP_003911960.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
 gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
          Length = 365

 Score =  381 bits (978), Expect = e-104,   Method: Composition-based stats.
 Identities = 187/351 (53%), Positives = 245/351 (69%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  +N + E P +W     A+ L RER +L+  +  I +
Sbjct: 13  ELSERTELLRGYLDYDAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTIND 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL+LA+EE D    +E    L+ ++ ++E  +F  + SG  D+NDAYL++
Sbjct: 73  LDQGLEDVRELLDLAVEEQDEESFEEAKAELEGLEAQLEKLEFRRMFSGAQDANDAYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDW N+LLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G  A+GWL
Sbjct: 133 QAGSGGTEAQDWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRITH+PT  VVQCQ ERSQHKNK QA   L+AKL+ELE+QK+       E 
Sbjct: 253 HVNTTESAVRITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAEKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLK 362


>gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 368

 Score =  381 bits (978), Expect = e-104,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  ++  +G   D +   + +  ++ +  DP  W ++ +++ L + ++ L   +     
Sbjct: 11  KMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI +E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F  E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P ++D IE+EI   D RIDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     + 
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              E  WG QIRSYV QPY +VKD RTN E  +   V+DG++DDF+ A L  K
Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363


>gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2]
 gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter
           eiseniae EF01-2]
          Length = 381

 Score =  381 bits (978), Expect = e-104,   Method: Composition-based stats.
 Identities = 163/345 (47%), Positives = 238/345 (68%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL  ++   +DP +W +  +A+ L +E++ LD+ +S + ++   L 
Sbjct: 35  KNYGGIFDYDAKFERLRTVDAALQDPAVWNDPKKAQALGKEKKSLDDVVSMLDKLGRELA 94

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           DN  L E++ +E D + L        R++  +E  +F  + S EAD+ + ++++ AGAGG
Sbjct: 95  DNTELFEMSKQEGDDAGLLALQAEAARLRPGIEQLEFRRMFSKEADALNCFVDIQAGAGG 154

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA MLLR Y R+AE++ FK    E   G+ AG+KSAT+ ++G  AYG L+ E GV
Sbjct: 155 TEACDWAGMLLRQYLRYAERKGFKATVEEETPGDVAGLKSATIKVEGEYAYGLLRTETGV 214

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSF+S++VYP +DDSI+I+I+ +D R DT+R+SGAGGQH+N TD
Sbjct: 215 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTD 274

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VVQCQ  RSQH N+  AW  LR++LY+ E + R++     E SKT++G
Sbjct: 275 SAVRLTHLPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHERRLRQQEQQKLEDSKTDVG 334

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRT++E ++   VLDGDLD F++A L 
Sbjct: 335 WGHQIRSYVL-DNSRIKDLRTHVEISATQKVLDGDLDAFIEAALK 378


>gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58]
 gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58]
          Length = 377

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 210/353 (59%), Positives = 263/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  L    DWD A++RL  LN + EDP LW N  +A+ +MRER  LD+AI   + 
Sbjct: 13  RIDAALALLRQSLDWDRALRRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRA 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D   L+E+A  E D  ++ E    L+ +    +  + ++LL+GEADS D YLE+
Sbjct: 73  IEAEKSDTAELIEMAEAEGDEGMVDEAVAALKALADRADEDKIKALLAGEADSYDTYLEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L+KG NAYG+ 
Sbjct: 133 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYA 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IE+ ESD +IDTYRASGAGGQ
Sbjct: 193 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEVKESDLKIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 253 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQ 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 313 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 365


>gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 367

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|91794477|ref|YP_564128.1| peptide chain release factor 2 [Shewanella denitrificans OS217]
 gi|91716479|gb|ABE56405.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           denitrificans OS217]
          Length = 352

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 177/343 (51%), Positives = 232/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+ N  +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYANKKERLEEVSLELESSAVWNEPERAQALGKERSALEAVVKTIDDLDSGLEDI 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+EEDD     E S  L  ++  +E  +F  + SG  DS D YL++ +G+GGTE
Sbjct: 68  EGLVELAIEEDDEDTFNEASAELDELERRLEDLEFRRMFSGPNDSADCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ S+ RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPSELRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ  RSQHKNK  A   L+AKLYELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQSGRSQHKNKDSAMKQLKAKLYELEMMKQNVDKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRNTQTVLDGDLDKFIEASLK 349


>gi|218906362|ref|YP_002454196.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
 gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
          Length = 380

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17]
 gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17]
          Length = 375

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 215/352 (61%), Positives = 274/352 (77%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  L  L    DWD A++RL  LN + ED  LW +  +A+ +MRER+ LD AI+  + I
Sbjct: 12  INDALALLRRFLDWDRALRRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAITATRAI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L   + L+ELA  E D  + +E   +L  +    E  + ++LL+GEAD+ND+Y+E++
Sbjct: 72  ENELSGTVELIELAEMEGDEELEKEAVTSLGDLAKRAEADKVKALLAGEADANDSYIEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA ML RMYTRWAE+R  K E ++ H GE+AGIKSATLL+KG NAYG+ K
Sbjct: 132 AGAGGTESQDWAGMLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGENAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPV+DD+IE+EI+ES+ RIDTYRASGAGGQH
Sbjct: 192 VESGVHRLVRISPYDSAARRHTSFSSVWVYPVIDDNIEVEINESELRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PTG+VVQCQ +RSQHKNKA+A+N LRA+LYE EL +RE +AN   ++
Sbjct: 252 INTTDSAVRITHLPTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAVANAENAT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDLD FM A L+ +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALSQR 363


>gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
 gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
          Length = 368

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  ++  +G   D +   + +  ++ K  DP  W ++ +++ L + ++ L   +     
Sbjct: 11  KMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI +E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F  E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P ++D IE+EI   D RIDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     + 
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              E  WG QIRSYV QPY +VKD RTN E  +   V+DG++DDF+ A L  K
Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363


>gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB]
 gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB]
          Length = 351

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P++W     A+ L +ER  L+  +  + ++   L D 
Sbjct: 7   FGGIFDYDAKKERLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 67  QGLLELAVEAEDEETFDEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349


>gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010]
 gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010]
          Length = 348

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 184/346 (53%), Positives = 249/346 (71%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D+  ++L  +  + E P +W +   A+ L +ER  L+  ++ +   +D L
Sbjct: 1   MTISGGIFDYDDKAEQLVEVTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EE+D       + +L  ++  +E  +F+ + SG+ D N AY+++ +G+G
Sbjct: 61  EDAKDLLELAVEENDQETFDAITADLDELEKGLEKLEFQRMFSGKLDKNSAYIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWAN+LLRMY RW E + +K E +E+  GE AGIKSAT+ ++G  A+G L+ E G
Sbjct: 121 GTEAQDWANILLRMYLRWGESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+SI+VYP VDD+IEI+I+ +D R+DTYRASGAGGQHVNTT
Sbjct: 181 VHRLVRKSPFDSGARRHTSFASIFVYPEVDDTIEIDINPADLRVDTYRASGAGGQHVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSA+RITH PT +VVQCQ ERSQHKNK QA N LRAKLYELELQK+ E+    E SK++I
Sbjct: 241 DSAIRITHEPTNIVVQCQNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 301 GWGSQIRSYVL-DQSRIKDLRTGVETGNTQAVLDGDLDQFIEASLK 345


>gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp]
 gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           mendocina ymp]
          Length = 378

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 184/345 (53%), Positives = 243/345 (70%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +  GG+FD+D+   RL  +N + ED  +W     A+ L RER  L   +  I ++   L 
Sbjct: 32  SQFGGIFDYDHKHDRLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLA 91

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  LLE+A EE+D   + +    ++R++  +E  +F  + SGE D N+ YL++ AG+GG
Sbjct: 92  DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGG 151

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ IKG  A+GWL+ E GV
Sbjct: 152 TEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 211

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 212 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 271

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IG
Sbjct: 272 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 331

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L 
Sbjct: 332 WGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDGYLEASLK 375


>gi|294142345|ref|YP_003558323.1| peptide chain release factor 2 [Shewanella violacea DSS12]
 gi|293328814|dbj|BAJ03545.1| peptide chain release factor 2 [Shewanella violacea DSS12]
          Length = 352

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 168/350 (48%), Positives = 234/350 (66%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   L   GG FD+D   +RL  ++ + E+  +W +   A+ L +ER  L+  +  I ++
Sbjct: 1   MQNVLLAFGGFFDYDAKKERLEEVSRELENSDVWNDPDNAQALGKERAALELIVKTIDDM 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA+EE D     + S  L  ++  +E  +F  + SG  D  ++YL++ 
Sbjct: 61  DTGLEDVEGLLDLAIEEGDEDTFNDASAELDDLEKRLEDLEFRRMFSGPHDIANSYLDIQ 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANM+LRMY RW E   +K E +E+  G+ AGIK AT+   G  A+G L+
Sbjct: 121 SGSGGTEAQDWANMVLRMYLRWGEAHDYKPELIEVTAGDVAGIKGATIKFNGEYAFGSLR 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH
Sbjct: 181 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKL+ELE+ K+ +     E +
Sbjct: 241 INKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLFELEMLKQNQEKQAAEDA 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L 
Sbjct: 301 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQTVLDGGLDMFIQASLK 349


>gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica ST-640]
 gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
          Length = 367

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
 gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/342 (52%), Positives = 239/342 (69%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL+ +N+  E P +W +   A  L +E++ LDN +  I+++   L D  
Sbjct: 16  GGIFDFDEKKNRLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTR 75

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A+ E+D + L+E       I+  VE  +F  + S  AD    +LE+ AGAGGTE+
Sbjct: 76  DLYEMAVAENDDATLEELERESLGIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA MLLR Y R+ E+R F T  LE  +G+ AGIK ATL ++G  AYG+L+ E G+HRL
Sbjct: 136 CDWAAMLLRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRL 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIE++I+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 196 VRKSPFDSSGGRHTSFASVYVYPEVDDSIEVDINPADLRIDVYRASGAGGQHVNKTESAV 255

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQH+N+ +A  MLRA+L+ELEL+KR+   +  E+SKT+IGWG 
Sbjct: 256 RITHLPTNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWGH 315

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTN E ++   VLDGDLDDF+  +L 
Sbjct: 316 QIRSYVL-DQSRIKDLRTNFETSNTKAVLDGDLDDFIAESLK 356


>gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 367

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK + LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIDILEEDDGEIAGINRATIRLEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|24638159|sp|Q9JXB3|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
 gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
          Length = 367

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ F+ E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893]
 gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893]
          Length = 351

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 181/347 (52%), Positives = 243/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD+D   +RL+ +  + E P +W++   A+ L +ER  L+  +  I  +   L
Sbjct: 4   LKRSGGIFDYDQRSERLTEVERELEVPSVWEDPERAQALGKERSDLELIVRTIDNLTSGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLE+A EE+D     E   +L  +  E+E  +F  + SGE D+N+AYL++ AG+G
Sbjct: 64  EDAEGLLEIADEEEDEGTAAEIEADLAGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW NMLLRMY RWAE+R FK E +E+ +G+ AGIKSAT+ I+G  A+GWL+ E G
Sbjct: 124 GTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGDVAGIKSATIHIQGDYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T
Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q+R       E +K +I
Sbjct: 244 ESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
 gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
          Length = 374

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 200/351 (56%), Positives = 262/351 (74%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++ ++ L    DW+ A  RL  LN  +EDP LW +  +A++LM+ERQ L+  I+ I  
Sbjct: 11  EITQAISLLRRHLDWEKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSING 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L+ELA  EDD  +L E    L+ +  ++  +Q  +LLSGEAD+ND Y EV
Sbjct: 71  LEGDLGDTKDLIELAEMEDDADVLAEAESALRELHADLGKRQAATLLSGEADANDTYFEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTES DWANMLLRMY RWAE   +K E      G+EAGIK+AT+L+KG NAYG++
Sbjct: 131 HSGAGGTESNDWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYGYM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD+IEI + +++ R+DT+R+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSQAKRHTSFSSVWVYPVIDDNIEIIVPDNEIRLDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+A A   L+++LYE E+QKR E       
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRANAMKALKSRLYEAEMQKRNEATQAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVLQPYQ+VKDLRT +E T+PS VLDGDL+ FM+A LA
Sbjct: 310 AKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALA 360


>gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
 gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
          Length = 344

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G+FD+D   +RL  ++ + E P +W     A+ L +ER  L+  +  I++++ +L D   
Sbjct: 2   GIFDYDVKQERLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNG 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LL+LA+EE+D +   E    L+ ++  +   +F  + SGE DS + YL++ AG+GGTE+Q
Sbjct: 62  LLDLAVEENDEATFNEVLAELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANMLLRMY RWA+ + F+TE ++  DG+ AG+KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 122 DWANMLLRMYLRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP +DD + IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 182 RKSPFDSGGRRHTSFSSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG Q
Sbjct: 242 ITHIPTNIVTQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRTN+E  +   VLDGDLD F++A+L  
Sbjct: 302 IRSYVLDD-ARIKDLRTNVETRNTQAVLDGDLDKFIEASLKA 342


>gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
 gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
          Length = 375

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 199/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L     W+ A  RL   N + EDP LW +   A+ LMRERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHDG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I++ L DNL L+EL   E D  ++ E    ++ +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKNELEDNLGLIELGEAESDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      G+EAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV   Q +SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 251 HVNTTDSAVRITHMPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD+FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361


>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
 gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
           degradans 2-40]
          Length = 347

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 179/345 (51%), Positives = 242/345 (70%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           CLGG+F++    +RL+ +  +  +P +W +   A+ L  ER  L+  +  I+ +++ + D
Sbjct: 2   CLGGIFEYAEKKERLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVAD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLE+A+EE D     E      R++  +   +F  + SGE D N+AYL++ AG+GGT
Sbjct: 62  CRELLEMAIEESDEDSFLEICSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA MLLRMY RW E + FKT   E   G+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWAEMLLRMYLRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS +RRHTSFSS++V P +DD+I+IEI+++D R DTYRASGAGGQHVN TDS
Sbjct: 182 RLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+VVQCQ ERSQH N+ +AW MLRA++YE E+QKR       E SK++IGW
Sbjct: 242 AVRLTHAPTGIVVQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYVL   Q +KDLRTN++ ++ + VLDG LDDF+ A+L  
Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCNAVLDGKLDDFIVASLKA 345


>gi|170725301|ref|YP_001759327.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
 gi|238688657|sp|B1KFR6|RF2_SHEWM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169810648|gb|ACA85232.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
          Length = 365

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 237/350 (67%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G+FD+D   +RL  ++ + E   +W N   A+ L +ER  L+  +  I ++
Sbjct: 14  LADRTLLLRGIFDYDAKKERLEEVSAELESSEVWNNPENAQALGKERSALELVVKTIDDM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   L+ELA+EE+D     + S  L  ++  +E  +F  + SG  D +D YL++ 
Sbjct: 74  DSGLEDVEGLVELAVEEEDEETFADASSELDALEKRLEELEFRRMFSGPHDISDCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANM+LRM+ RW E   +K E +E+ DG+ AGIK AT+   G  A+G L+
Sbjct: 134 SGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E +
Sbjct: 254 VNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQQAEDA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 314 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 362


>gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 376

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 245/353 (69%), Positives = 298/353 (84%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  + +  L    DWD A++RL +LN K EDP+LW +  EA+ LMRERQ LD+ I+ +K+
Sbjct: 11  ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +L DN+ L+EL  EE D S+++E  D L+ +K E   +Q E++LSGEAD ND YLEV
Sbjct: 71  LEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL
Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +
Sbjct: 251 HVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKTEIGWG QIRSYVLQPYQMVKDLRT +  ++P DVLDGDL++FM+A LA +
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALAHR 363


>gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
 gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
          Length = 333

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 219/325 (67%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
             ++P  W +   A+  M+E   L + +   ++++ +  D  +L EL  EE+D  IL E 
Sbjct: 1   MIQEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEI 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +Q I  E++    E LL+G  D N+A L +HAGAGGTE+ DW  MLLRMY RW EKR
Sbjct: 61  EAGIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E L+   G+EAGIKSATL + G NAYG+LKGE GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GYKVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P V D  EI+I   D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VV CQ ERS
Sbjct: 181 LEVLPEVSDGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+A A  ML+AKL+E + Q++E   N  +  + +I +G QIRSYV  PY +VKD RT
Sbjct: 241 QIQNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
           N E  +   V+DG+LD+F+ A L  
Sbjct: 301 NTEVGNVHAVMDGELDEFISAYLVW 325


>gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039699|gb|EEG49945.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
          Length = 348

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 164/336 (48%), Positives = 232/336 (69%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  +R+  L  + E P  W +  E++  M+E +++ + +   + ++ ++ D   L+E+  
Sbjct: 3   NKEKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGY 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE+D  ++ E  + L   +   +  + ++LLSGE DSNDA + +HAGAGGTES DWA+ML
Sbjct: 63  EENDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTRWA+K+ F  E L+  DG+EAGIKS T  ++G NAYG+LK E+GVHRLVRISP++
Sbjct: 123 YRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFN 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  +R TSF S  V P +++ +++EI + D R+DTYR+SGAGGQH+N T SA+RITH+PT
Sbjct: 183 AAGKRQTSFVSCDVMPDIEEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHLPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQH NK +A  ML+AKLY L+ Q+ EE  +      TEIGWG QIRSYV+
Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSYVM 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QPY MVKD RT+ E  +   V+DG++D F+ A L  
Sbjct: 303 QPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYLKW 338


>gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
 gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
          Length = 342

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 229/329 (69%), Positives = 280/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL   E D  I+
Sbjct: 1   MNNKAEDPTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           ++  D L+ ++ E   +Q E++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KDAEDALKALRSEANRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++  FK E LE+HDGEEAGIKSAT+L+KG NA+GWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 DREGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS+WVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ
Sbjct: 181 FSSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE+ELQKRE+ AN   +SKT+IGWG QIRSYVLQPYQ++KD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +E T+P +VLDGDL+ FM+A LA +
Sbjct: 301 LRTGVESTAPGNVLDGDLNQFMEAALAHR 329


>gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
 gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
          Length = 396

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 223/352 (63%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++   G   D D     ++    K  +P  WQ+ + A+ ++ E   L        ++
Sbjct: 38  MSAEIEKFGDSLDLDALNDEIAANEAKMVEPDFWQDNVAAQKIIDENNVLKGRRDDYLKL 97

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + +    ++L  E  D  +  E +D+L ++  ++   +   LL+   D N+A LE+H
Sbjct: 98  ANGVENVEAAIDLLSELYDEDMATEMADDLDKLSEDLSAYRLAQLLNEPYDKNNAILEIH 157

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G+GGTES DW   L RMYTRWAE+  FK + ++ H G+ AG+ S TL+I G NAYG+L+
Sbjct: 158 PGSGGTESADWGANLQRMYTRWAEQHGFKVDIMDYHPGDVAGVDSVTLMITGHNAYGYLR 217

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHR VRISP+DS  RRHTSF SI V P +DDS+E++I+ +D ++D YRASGAGGQH
Sbjct: 218 SERGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDSVEVDINPADVKMDVYRASGAGGQH 277

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+THIPTG+VV  QQ+RSQ +NK  A+ MLRAKLY+LE+ K+E+        
Sbjct: 278 INKTSSAVRLTHIPTGIVVASQQQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERAAIAGD 337

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             E GWG QIRSYV QPY+MVKD R   E  +P  V+DGDLD F+ A L  +
Sbjct: 338 HLENGWGSQIRSYVFQPYRMVKDHRDGFESGNPQAVMDGDLDPFINAYLRWR 389


>gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1]
 gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1]
          Length = 329

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 222/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L + +   + +++R  +  +  EL  EE D  + +E  
Sbjct: 1   MAAPDFWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKEEPDEELQKELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  AEAKKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 YKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  DD+IEI++   + ++DTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 EVVPEFDDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ +L++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 TEVGNVQAVMDGEIDVFIDAYLRSK 325


>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
 gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
          Length = 341

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 162/335 (48%), Positives = 229/335 (68%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R++ L     DP  W++  +A+  M+E   L + +    ++  +  D  +L EL  E
Sbjct: 4   KEERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAE 63

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D  ILQE  + +Q I+ E++    + LL+G  D N+A + +HAGAGGTE+ DW  ML+
Sbjct: 64  EEDPDILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEAMDWNEMLM 123

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+ +K + L+   G+EAG+KSATL   G NAYG+LKGE GVHRLVRISP+D+
Sbjct: 124 RMYIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPFDA 183

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF+S+ V P V D I+I+I+  D ++DT+RASGAGGQHVN T+SAVRITHIPTG
Sbjct: 184 SGRRHTSFASVEVLPEVSDDIDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTG 243

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ +N+A A  ML+AKL+E + Q++ +  N  +  + +I +G QIRSYV  
Sbjct: 244 IVVACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYVFH 303

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           PY +VKD RTN E  +  +V+DG++DDF+ A +  
Sbjct: 304 PYNLVKDHRTNCEVGAVYNVMDGEIDDFVSAYMIW 338


>gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
          Length = 375

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 177/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  +N + E P++W +   A+ L RER  L+  +  I  +
Sbjct: 14  LTGRVVSLRGYLDYDAKKERLEEVNRELELPNVWDDPERAQALGRERALLEKTVGGIASV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L  +  LLELA  E D    +    ++ R +  +E  +F+ + SG+ D  +A++++ 
Sbjct: 74  LEGLEGSTELLELAESEQDEETAEAVVADVDRFEKHIEALEFQRMFSGQMDGANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMY RW E R +KTE LE+  G+ AGIKSAT  ++G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEMLLRMYLRWCESRGWKTELLEVSGGDVAGIKSATFRVEGDFAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD I+IEI+ +D + D YR+SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+P+G+VV CQ ERSQH N+ +A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYELEIQKRNAEKDAVEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
 gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
          Length = 349

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 173/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+     +L  +N + EDP +W +  +A+ L RE++ L+N +  +  I+  L D 
Sbjct: 5   YGGIFDFAAKSDKLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE D   L+    ++  ++  +E  +F  + S   D  + ++++ AGAGGTE
Sbjct: 65  GELFEMAKEEQDDETLKAVEADVSELQDRIEKLEFRRMFSNPMDPCNCFVDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+M+LR Y R+ E++ F    LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHR
Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS + RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRKSPFDSANGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VVQCQ +RSQH+N+A AW ML+++LYELEL+KR       E SKT++GWG
Sbjct: 245 VRLTHIPTGIVVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT+ E  +   VLDGDLDDF+  +L 
Sbjct: 305 HQIRSYVL-DSSRIKDLRTSHETGNTKAVLDGDLDDFIIESLK 346


>gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
 gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
          Length = 365

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  +L  L G  D+    +RL  +  +   P +W     A+ L +ER  L   +  +  
Sbjct: 13  NLKGRLEALRGYLDFAAKQERLVEVERELAIPSVWNEPERAQRLGQERAQLQAVVGPLAA 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + + +     L ELA+EE D    +E S  L+ ++  +E  +F+ + +GE D N+AYL++
Sbjct: 73  LGEEIGQIKELFELAVEEGDEDTAREVSAELETMEQRLEKLEFQRMFAGEMDPNNAYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWANMLLRMY RW EK  FKTE  E+  GE AGIKSAT+  +G  A+GWL
Sbjct: 133 QAGSGGTEAQDWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRFEGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS +RRHTSF+S++VYP VD+ I+IEI+ +D RIDTYRA+GAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRAAGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+P+ +VVQCQ ERSQH+NKA     LRAKLYELE++KR+      E 
Sbjct: 253 HVNRTDSAVRITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRKRQAEKQAAEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K +IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 AKADIGWGSQIRSYVL-DQSRIKDLRTGVEMGNTQAVLDGDLDLFIEASLK 362


>gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 369

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 227/353 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  L  LG     +  + R+S L  +T++P  W +  +A+ +  +   L   +   + +
Sbjct: 14  MTEPLKDLGKALYIEPTLDRISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q    D   L++L  EE+D +++ E        K      + ++LL GE D N+  L +H
Sbjct: 74  QKEFDDIDTLIDLGQEENDGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  ML RMYTRWAE   ++ + L+I DG+EAG+KS +  I G NAYG+++
Sbjct: 134 AGAGGTEAQDWTEMLYRMYTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D++ RRHTSF+S+ V P +D+SI+I I+  D RID YR+SGAGGQH
Sbjct: 194 SEMGVHRLVRISPFDASGRRHTSFASVEVLPELDNSIQININPDDLRIDRYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTGVVV CQ ERSQ +N+  A NML++KL+ L    + +  +  + +
Sbjct: 254 VNKTESAIRITHIPTGVVVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + +I WG QIRSYV  PY MVKD RTN E T    V+DGDLD F+ A L+  K
Sbjct: 314 QMDIAWGSQIRSYVFCPYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLSQGK 366


>gi|126173117|ref|YP_001049266.1| peptide chain release factor 2 [Shewanella baltica OS155]
 gi|153002001|ref|YP_001367682.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304410531|ref|ZP_07392149.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|307304624|ref|ZP_07584374.1| peptide chain release factor 2 [Shewanella baltica BA175]
 gi|125996322|gb|ABN60397.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           baltica OS155]
 gi|151366619|gb|ABS09619.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304351015|gb|EFM15415.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|306912026|gb|EFN42450.1| peptide chain release factor 2 [Shewanella baltica BA175]
          Length = 352

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/343 (51%), Positives = 233/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  S   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRSTQAVLDGDLDKFIEASLK 349


>gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N]
 gi|123515203|sp|Q2L224|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N]
          Length = 367

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/349 (48%), Positives = 247/349 (70%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +   L    D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+ 
Sbjct: 17  AEREQALRRYLDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLTELG 76

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D L L ELA  ++D + L+   ++    +  +E  +F  + S  AD  + +L++ A
Sbjct: 77  QGVADALELFELAAADEDDATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFLDIQA 136

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ 
Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFGYLRT 196

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+
Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHI 256

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++KR       E SK
Sbjct: 257 NKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 317 TDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364


>gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1]
 gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1]
          Length = 343

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 157/333 (47%), Positives = 225/333 (67%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R+  L+   E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+
Sbjct: 2   KRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEEN 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S++ E    +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RM
Sbjct: 62  DPSLIPEIQGMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRM 121

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWA+K+ F T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  
Sbjct: 122 YQRWADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +R TSF S  V P + + +++EI+  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+V
Sbjct: 182 KRQTSFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK  A  ML+ KLY L+ ++  E  +       +I +G QIRSYV+QPY
Sbjct: 242 VQCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +VKD RT  E  + + VLDGD+D F+ A L  
Sbjct: 302 TLVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 334


>gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693429|sp|B4SHV0|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 374

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  +  + E P +W N   A+ L RER  L+  +  I  +
Sbjct: 14  LTDRVLSLRGYLDYDAKKERLEEVTRELESPDVWNNAEYAQNLGRERSSLEKTVGGIASV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D L D   LLELA  E D         +L + +  VE  +F+ + SGE D+  A++++ 
Sbjct: 74  LDGLADATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RW E R +KTE +E+  G+ AGIKSATL ++G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 367

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 168/350 (48%), Positives = 236/350 (67%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++   L    D+D   +RL  +N   EDP +W +  +A+ L +E++ L   +  + ++
Sbjct: 16  LSQRTQELRRYLDFDAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ EE D + L        +++  +E  +F  + S EAD  + ++++ 
Sbjct: 76  TRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA MLLR Y ++AE++ FK    +   G+ AGIKSAT+ I+G  AYG L+
Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E     E +
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364


>gi|172058432|ref|YP_001814892.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
 gi|229576666|sp|B1YLH0|RF2_EXIS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171990953|gb|ACB61875.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
          Length = 366

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 167/351 (47%), Positives = 231/351 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++L+      D +  + R+  L  +   P  W N   A+ ++ E   L   +   + +
Sbjct: 13  MEKKLDEYKASLDLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D   + ++  EL  EE D  + +E    L  IK + +  + + LL+GE D+N+A LE+H
Sbjct: 73  ADGHENIVLTYELIKEEPDVELQEELESELGDIKKKFDEFELQILLNGEYDANNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY R+ +K+ +K E ++   G+EAG+KS TL I+G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRLVRISP+DS+ RRHTSF S  V P  +D I+IEI   D R+DTYRASGAGGQH
Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PTGVVV CQQERSQ KN+  A  ML+AKLY+ E++++++  +     
Sbjct: 253 INTTDSAVRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++I WG QIRSYV  PY MVKD RTN E  +    +DGD+  F+ A L +
Sbjct: 313 KSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLRL 363


>gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21]
 gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 371

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 177/352 (50%), Positives = 243/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +++ L G  + D+  +R+  L   T  P  W +   A+ ++R R  ++  ++  + 
Sbjct: 11  ELAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL  EE D + L E +    +++  V   +F  +LSG  D++ A++ +
Sbjct: 71  LDKQARDIQELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA MLLRMY R+ EK+ +KTE  +  +G+ AG+K  T  + G  AYG+L
Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240
           K E G+HRLVRISP+DS++RRHTSF+S +V+PV+ +D IEI+I+ESD RIDTYR+SGAGG
Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+   
Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             K EIGWG QIRSYVL PY+MVKDLRT +E   P  VLDG LDDF+   L 
Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFVVPYLM 362


>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
 gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
           defluvii]
          Length = 377

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 177/346 (51%), Positives = 234/346 (67%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD       L+ +  KT  P  W++   A  + R +  LD  +S  ++ + R  D
Sbjct: 15  NYGGIFDLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQND 74

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELALE  D  + QE    L+  +  V   + E LLSGE DS++A   +H GAGGT
Sbjct: 75  IEALLELALESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGT 134

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWA MLLRMY RWAE++ FK E L++  G+EAGIKSATL + GP AYG+LK E GVH
Sbjct: 135 ESQDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVH 194

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+N RRHTSF+S++VYP ++D +++ I + D R+DT+RA GAGGQ+VN  ++
Sbjct: 195 RLVRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVET 254

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITHIPTG+VVQCQ ERSQ +N+  A  +L+A+L+E+E +K+E   N     K +I W
Sbjct: 255 AIRITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAW 314

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV QPYQMVKD RT  E    S V+DG+LD F++A L  K
Sbjct: 315 GSQIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYLQRK 360


>gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 349

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 167/343 (48%), Positives = 244/343 (71%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL+ +N+  EDP +W +  +A+ L +E++ LD  ++ + ++   +   
Sbjct: 5   FGGIFDFDVKSRRLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNITGA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           + L ++A EE D   +     ++Q     +   +F  +   E DS + ++++ AGAGGTE
Sbjct: 65  IELFDMAKEESDFETIAAIEQDVQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+ML R Y ++ E++ +KTE LE  DG+ AGIKSAT+ + G  AYG L+ E GVHR
Sbjct: 125 ACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS++ RHTSF+SI+VYP +DDSIEI+++ +D R DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E+QKR    +  E+SKT++GWG
Sbjct: 245 VRLTHLPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 305 HQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 346


>gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354]
          Length = 375

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 207/353 (58%), Positives = 263/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++ L  LN + EDP LW +  +A+ +MRE++ L++AI  +  
Sbjct: 11  RIEAALALVRQSLDWERALRELDELNARVEDPTLWDDPKQAQAIMREQKRLESAIGTVNT 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +E+   E D  I+ E   +L+++    +  + ++LLSGEAD+NDAYLEV
Sbjct: 71  ISSEMADAIEFVEMGEAEGDDDIVNEGLTSLEKLAARADADKVQALLSGEADANDAYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML+RMY RWAEKR FK E +E   GE+AGIKS TL IKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD IEIEI+ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIEIEINESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKN+A A +ML+A+L+E E+ +RE  A+   +
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KTEIGWG QIRSYVLQPYQ+VKDLRT    T+P DVLDG +D F+ A LA +
Sbjct: 311 EKTEIGWGHQIRSYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALAQR 363


>gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
 gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
          Length = 349

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 172/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+     +L  +N + EDP +W +  +A+ L +E++ L+N +  +  I+  L D 
Sbjct: 5   YGGIFDFAAKSDKLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE D   L+   D+   +  ++E  +F  + S   D  + ++++ AGAGGTE
Sbjct: 65  AELFEMAKEEQDDDTLKAVDDDTLELLDQIEKLEFRRMFSNPMDPCNCFIDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+M+LR Y R+ E++ F    LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHR
Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS++ RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRKSPFDSSNGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQH+N+A AW ML+++L+ELEL+KR       E SKT++GWG
Sbjct: 245 VRLTHAPTGIVVQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRTN E  +   VLDGDLDDF+  +L 
Sbjct: 305 HQIRSYVL-DNSRIKDLRTNHETGNTKAVLDGDLDDFILESLK 346


>gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124]
          Length = 362

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/350 (45%), Positives = 230/350 (65%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G   D  +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 12  ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL  EE+D    +E    ++ +  E++  + E++LSGE D NDA L +
Sbjct: 72  LNERIDDVEVLKELM-EENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+DGD+D+F+ A L
Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 370

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/353 (49%), Positives = 241/353 (68%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + N L  +   +   + +  L+++  DP+ W +  +A+ +  +R +L   +  I +
Sbjct: 12  EIIEKWNNLKDILKPEKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I  ++ D    ++L   E D S+  E    +  ++ E+E  +  SLLS E DS +A L +
Sbjct: 72  IDKKVKDLQDYIQLLEMEKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  ML+RMY RWAE + F+ E ++    + AGIKSAT++IKGP AYG+L
Sbjct: 132 QAGSGGVEACDWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSF+++ V P +D+ I++EI+E D RIDT+RASGAGGQ
Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFAAVSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LELQK++E     E 
Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DGD+D F+++ L  K
Sbjct: 312 EKKDITWGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYLKWK 364


>gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum 70/3]
          Length = 370

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 166/347 (47%), Positives = 230/347 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L G  D DN    ++ L  ++  P  W +V  ++ + ++     N +   +++++  
Sbjct: 18  LKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D + +LELA EEDD S+L E  +  +  + E+E ++  +LLSGE D N+A L  HAGAG
Sbjct: 78  DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  ML RMY  WAE+   K   L+  DGEEAGIKSA++L++G NAYG+LK E G
Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T
Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHIPTG+V  CQ ERSQH+N+  A  ML++KL E++ ++  +  +  +  + +I
Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L  
Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364


>gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 342

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 167/340 (49%), Positives = 233/340 (68%), Gaps = 1/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  + ++   L DN  L
Sbjct: 1   MFDYDAKAERLRTVNASLEDPSVWNDPKKAQELGKEKKMLDGVVVTLNDLTSNLSDNTEL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E++ EE D   L        ++   VE  +F  + +  AD    +L++ AGAGGTE+ D
Sbjct: 61  YEMSKEEGDEESLLTIETETAKLTEIVEGLEFRRMFNNPADPLPCFLDIQAGAGGTEACD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLR Y ++AE++ F     ++ DG+ AGIKSAT+ I G  A+G L+ E GVHRLVR
Sbjct: 121 WASMLLRQYLKYAERKGFTANVEDLTDGDTAGIKSATIKIDGEYAFGHLRTETGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS+  RHTSF+S++VYP +DDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+
Sbjct: 181 KSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRL 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ EL+KR+E     E +KT++GWG QI
Sbjct: 241 THIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKRQEEQQKLEDTKTDVGWGHQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 301 RSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIQASLK 339


>gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862]
          Length = 332

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 212/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W + + A+ ++     L         +   + +    LEL  E  D  +  E  
Sbjct: 1   MAQPDFWNDNVAAQKVIDANNILKGRRDDYLNLTAGVENVETALELLAEMPDEDMQAEME 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+++  ++E  +   LL+   D N+A LE+H G+GGTES DW   L RMYTRWAE+  
Sbjct: 61  ADLEKLAADLESYRLAQLLNEPYDKNNAILEIHPGSGGTESADWGANLQRMYTRWAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++ H G+ AGI SATL+I G NAYG+L+ E+GVHR VRISP+DS  RRHTSF SI
Sbjct: 121 FKVEIMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHTSFVSI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS++++I+ +D ++D YRASGAGGQH+N T SAVR+THIPTG+VV  QQ+RSQ
Sbjct: 181 DVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQQQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A+ MLRAKLY+LE+ K+E+        + E GWG QIRSYV QPY+MVKD RTN
Sbjct: 241 FQNKDTAYAMLRAKLYQLEMDKKEKERASIAGEQLENGWGSQIRSYVFQPYRMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +P  V+DGDLD F+ A L  K
Sbjct: 301 YESGNPQGVMDGDLDPFINAYLRWK 325


>gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 330

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/325 (53%), Positives = 227/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  EA+ + +E   +  ++   KEI  +  D   LLE+ALEE+D S+  E  
Sbjct: 1   MGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK  V   + E LLSG  D+N+A L +HAGAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  TEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F     ++  G+EAG+KSATL I G NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ 
Sbjct: 121 FSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P +DD++E+ I+ +D R+DTYRASGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ
Sbjct: 181 DIMPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ Q   MLRAKL+ELE +K+E      E  + +I WG QIRSYV QPY MVKD+RT 
Sbjct: 241 LQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F++A LA K
Sbjct: 301 METGNVQAVMDGDLDAFIEAFLAAK 325


>gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
 gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
          Length = 374

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 193/352 (54%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + LN L    D++ A  RL   + + EDP LW +   A+ LMR+RQ L + ++    I
Sbjct: 12  IQKSLNLLAQRMDYETARYRLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTLTMHDTI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  I+ E  + L+ ++ +   K+ E+LL GEAD+ND +LEV+
Sbjct: 72  KQELADNIELIEMGEMEGDADIITEAEEALKSLREKAAQKELEALLDGEADANDTFLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWANML RMY RWAEK+ +K E   +  G+EAGIKS T  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWANMLSRMYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHFPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD  M ATLA+ 
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTGFETSDTKGVLDGDLDGLMGATLALD 362


>gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28]
          Length = 366

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 230/351 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    GLFD D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGLFDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. Ames]
          Length = 365

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 227/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 12  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 72  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364


>gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
 gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
          Length = 328

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 172/323 (53%), Positives = 220/323 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L   +   K++ +   D  +  EL  EEDD  +  E  
Sbjct: 1   MADPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +K ++   + + LLS   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEKR 
Sbjct: 61  SGLAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FAVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+++IE++  D +IDTYRASGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQ
Sbjct: 181 EVMPELDDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  M++AKLY+L ++++E         + EIGWG QIRSYV  PY MVKD RT 
Sbjct: 241 IKNREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  + + V+DG++D F+ A L 
Sbjct: 301 FEIGNTNSVMDGEIDGFIDAYLR 323


>gi|85712973|ref|ZP_01044012.1| Protein chain release factor B [Idiomarina baltica OS145]
 gi|85693211|gb|EAQ31170.1| Protein chain release factor B [Idiomarina baltica OS145]
          Length = 348

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 186/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  LGG+FD+ +  +RL  +  + E P +W +  +A+ L +ER  L+  I  +  ++  L
Sbjct: 1   MRHLGGIFDYAHKKERLEEVTRELEQPEVWDDPPKAQSLGKERAALEQVIETLDNLEQGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L++LA+E +D +   E    L+ +  ++E  +F  + S + DS+D Y+++ +G+G
Sbjct: 61  EDIEGLVDLAVEAEDETTFDEAEQELKELLTQLEALEFRRMFSRDNDSSDCYVDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWANMLLRMY RWAE  +FKTE  E+ +GE AGIKSAT+ I G  AYGWL+ E G
Sbjct: 121 GTEAQDWANMLLRMYLRWAEAHEFKTEITELSEGEVAGIKSATVRIAGEYAYGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S+++YP VDD IEIEI+ SD RIDTYRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFIYPEVDDDIEIEINPSDLRIDTYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PTG+VVQCQ +RSQHKNK  A   L+AKLYELE+QK+ E     E SK +I
Sbjct: 241 DSAVRITHEPTGIVVQCQSDRSQHKNKDSAMKQLKAKLYELEIQKQNEDKQALEDSKADI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT IE  +   VLDG LD F++A+L 
Sbjct: 301 GWGSQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 345


>gi|303241850|ref|ZP_07328345.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
 gi|302590625|gb|EFL60378.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
          Length = 340

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 160/331 (48%), Positives = 221/331 (66%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +  L  K  +P  W ++  ++ ++++ + +   +     +     D   L EL LEEDD 
Sbjct: 5   IEELEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLEEDDE 64

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+  E  D+ ++ K + E  + E+LL G  D N+A L +HAGAGGTE+QDW  MLLRM+T
Sbjct: 65  SVFTEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFT 124

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RW E + F    L+  DGEEAGIKS T+ + G NAYG+LK E+GVHRLVRISP+D++ RR
Sbjct: 125 RWGESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPFDASGRR 184

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S  V P + D +E+ I+  D RIDTYRASGAGGQH+N T+SA+RITHIPTGVVV 
Sbjct: 185 HTSFASCDVMPELSDDVEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTGVVVA 244

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ +NK  A  ML++KL E++ ++++E     +  + +I WG QIRSYV  PY +
Sbjct: 245 CQTERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDLKGIQMDIAWGSQIRSYVFCPYTL 304

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           VKD RTN E+ +  +V+DGDLD F+ + L  
Sbjct: 305 VKDHRTNYEQINVDNVMDGDLDGFINSYLVF 335


>gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256]
 gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis
           alaskensis RB2256]
          Length = 375

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 222/353 (62%), Positives = 265/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++  L  L    DWD AV+RL  LN K EDP LW N   A+ +MRER+ LD AI+  + 
Sbjct: 11  KITAALALLRRFLDWDRAVRRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D   L+ELA  E D +++ E   +L  +    E  + ++LL+GEAD NDAY+EV
Sbjct: 71  IERECADTAELIELAEMEGDEAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAYIEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAEKR  K E +E   GE+AGIKSAT+L+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI+E D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINEGDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV  Q +RSQHKN+A A  ML+A+LYE ELQKRE  A+    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALSQK 363


>gi|56459931|ref|YP_155212.1| protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
 gi|56178941|gb|AAV81663.1| Protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
          Length = 351

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 182/343 (53%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D  ++RL  +  + E P++W +  +A+ L +ER  L+  +  + ++Q  L D 
Sbjct: 7   LGGIFDYDAKLERLEEVTREMEQPNVWDDPPKAQALGKERAALEQVVQTLDKLQQGLDDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L++LA+E +D     E  + L  +  ++E  +F  + S + DS D YL++ +G+GGTE
Sbjct: 67  EGLVDLAVEAEDEDTFNEAHEELSGLVKQLEALEFRRMFSKDNDSADCYLDIQSGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RWAE   FK E  E+ +G+ AGIKSAT+ + G  AYGWL+ E GVHR
Sbjct: 127 AQDWANMLLRMYLRWAEAHDFKAEITELSEGDVAGIKSATVRVVGEYAYGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++VYP VDD I+IEI  SD R+DTYRASGAGGQHVN TDSA
Sbjct: 187 LVRKSPFDSGNRRHTSFASVFVYPEVDDDIDIEIDPSDLRVDTYRASGAGGQHVNRTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQHKN+  A   L+AKLYE ELQK+ E     E SK +IGWG
Sbjct: 247 VRLTHEPTGIVVQCQSDRSQHKNRDSAMKQLKAKLYEFELQKQNEEKQALEDSKADIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT IE  +   VLDG LD F++A+L 
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 348


>gi|227817946|ref|YP_002817955.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229604792|ref|YP_002869406.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
 gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
          Length = 380

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 227/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 349

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 169/345 (48%), Positives = 244/345 (70%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL+ +N+  EDP +W +  +A+ L +E++ LD  ++ + ++   + 
Sbjct: 3   KLFGGIFDFDVKSRRLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNIT 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             L L ++A EE D   +     +++     +   +F  +   E DS + ++++ AGAGG
Sbjct: 63  SALELFDMAKEESDFETIAAIEQDVEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+ML R Y ++ E++ +KTE LE  DG+ AGIKSAT+ + G  AYG L+ E GV
Sbjct: 123 TEACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS++ RHTSF+SI+VYP +DDSIEIE++ +D R DTYRASGAGGQH+N TD
Sbjct: 183 HRLVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE E+QKR    +  E+SKT++G
Sbjct: 243 SAVRLTHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 303 WGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 346


>gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1]
 gi|81598559|sp|Q5NZU2|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed
           frameshift site [Aromatoleum aromaticum EbN1]
          Length = 367

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 179/350 (51%), Positives = 240/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   L    D+D    +L  +    EDP +W N  +A+ L +E++ L++ +  +++I
Sbjct: 16  LRARGRELRRYLDYDEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLEDVVHNLRDI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   L +LA  EDD   L     ++  ++ +V   +F  + S   D N  ++E+ 
Sbjct: 76  ESLSSDLKDLFDLAEAEDDEDTLAAVEADIGELQAKVHALEFRRMFSNPMDPNPCFIEIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML RMY R+ E++ F  E +E  +GE AGIK AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVSGDYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSFSS++VYP VDDSI+I+I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFSSVFVYPEVDDSIQIDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTGVVVQCQ +RSQHKNKA+A +ML+A+LYELEL+KR+      E S
Sbjct: 256 INKTDSAVRITHEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQSEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L 
Sbjct: 316 KSDIGWGHQIRSYVL-DQSRIKDLRTNFEVGNTQAVLDGDLDDFIAASLK 364


>gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|123585257|sp|Q3BUB7|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 374

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G+FD+D   +RL  ++ + E P +W +   A+ L RER  L+  +  I ++
Sbjct: 14  LNDRVLSLRGIFDYDAKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA  E D         +L   +  VE  +F+ + SG+ DS +A++++ 
Sbjct: 74  LSGLADAGDLLELAESEQDEDTALAVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ I+G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 369

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 184/352 (52%), Positives = 238/352 (67%), Gaps = 3/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  LG   D      RLS L T++EDP  W +   A+ +++E+  L    S   E+
Sbjct: 14  MDAELTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L D  ++ ELA E      + E    L   + + E  + E LLSGE DSN+A + +H
Sbjct: 74  KEELDDVSVMYELAEE---GEGMDELEQMLGAFQEKFEDFKLEMLLSGEYDSNNAIISLH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+MLLRMYTRWAE R +K + L+   G+ AGIKSATLLI+G NAYG+LK
Sbjct: 131 PGAGGTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+  D R+DTYR+SGAGGQH
Sbjct: 191 TERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SA+RITH+PTGVVVQCQ ERSQH+N+  A NML++KL E+  Q+++E        
Sbjct: 251 VNKTSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGD 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++I WG QIRSYV  PY MVKD RT +E  +   V+DGDLD FM A L  +
Sbjct: 311 YSQIAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFMNAELRKE 362


>gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9]
 gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9]
          Length = 368

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +    D+D    RL  ++   EDP +W++   A+ L RE++ L++ +  I  I
Sbjct: 17  LGSRTADIRQYLDYDGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSI 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  L ++   E+D   +    D+L  ++  +E  +F  + S   D N  ++++ 
Sbjct: 77  LSTLADSRELFDMGRAEEDDDTVLAVRDDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQ 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+QDWA+ML RMY R+ E++ FK E +E  +GE AGIKSATL ++G  AYG+L+
Sbjct: 137 SGAGGTEAQDWASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLR 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN+RR TSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH
Sbjct: 197 TETGVHRLVRNSPFDSNNRRQTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PT +VVQCQ +RSQHKN+A+A +ML+A+L+ELEL+KR E     E +
Sbjct: 257 INKTDSAVRITHLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDT 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYV      VKDLRT +E  +   V+DGDLD F++A+L 
Sbjct: 317 KTDVGWGHQIRSYVF-DQSRVKDLRTLVEVGNVKGVMDGDLDGFIEASLK 365


>gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           COL]
 gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|56749392|sp|Q6GB76|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749443|sp|Q7A6R4|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749454|sp|Q99VM1|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153100|sp|Q5HHR5|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115311853|sp|Q2YSH5|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040005|sp|A6TZN3|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus COL]
 gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 369

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 163/350 (46%), Positives = 224/350 (64%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ L  + G  D +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q
Sbjct: 14  NQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQ 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D     +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H 
Sbjct: 74  AEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQH 242
           E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          
Sbjct: 254 INKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGE 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L 
Sbjct: 314 QKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363


>gi|67461212|sp|Q927Y4|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 228/351 (64%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  +  E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQAELEKDIKAYVATISEFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|319427481|gb|ADV55555.1| peptide chain release factor 2, PrfB [Shewanella putrefaciens 200]
          Length = 365

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 233/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G  D+D   +RL  +  + E   +W     A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGYLDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 362


>gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101]
 gi|123145940|sp|Q0SR12|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 157/350 (44%), Positives = 229/350 (65%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G   D  +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 14  ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL  EE+D    +E    ++ +  E++  + E++LSGE D N+A L +
Sbjct: 74  LNERIDDVEVLKELM-EENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+ GD+D+F+ A L
Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|115311855|sp|Q49VV3|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 373

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 160/352 (45%), Positives = 228/352 (64%), Gaps = 1/352 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +L  L G  D +     +        DP  W N  +A+ ++ +   L + ++  + ++
Sbjct: 14  NEKLEQLRGSLDLEAKETNIQEYEEMMTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D      L LEEDD ++ Q+   ++Q  K E++  + + LL G  D+N+A +E+H 
Sbjct: 74  SELEDMDTTRALLLEEDDETMKQDLEQSVQDFKNELDQFELQLLLDGPYDANNAIMELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW NMLLRMY R+ E++ F  E  +   G+EAG+KS TL++KG NAYG+LK 
Sbjct: 134 GAGGTESQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQH 242
           E+GVHRLVRISP+DS+ RRHTSF+S  V P  +++ IEI+I+  D  +DT+RASGAGGQH
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH PTG+VV  Q ERSQ KN+  A   L++KLY+L+++++E+        
Sbjct: 254 INKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGE 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F++A L  +
Sbjct: 314 QKEIGWGSQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLRSQ 365


>gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
 gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
 gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
          Length = 341

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 170/339 (50%), Positives = 237/339 (69%), Gaps = 1/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 301 SYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 338


>gi|190149600|ref|YP_001968125.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245141|ref|ZP_07527233.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249543|ref|ZP_07531530.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255961|ref|ZP_07537758.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258552|ref|ZP_07540288.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260795|ref|ZP_07542482.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307262921|ref|ZP_07544544.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189914731|gb|ACE60983.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853921|gb|EFM86134.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306858398|gb|EFM90467.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861075|gb|EFM93072.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867346|gb|EFM99198.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869521|gb|EFN01311.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871739|gb|EFN03460.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 347

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/344 (50%), Positives = 240/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I+ +   + D 
Sbjct: 3   FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE
Sbjct: 63  EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HR
Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG
Sbjct: 243 VRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 303 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345


>gi|163748442|ref|ZP_02155696.1| peptide chain release factor 2 [Shewanella benthica KT99]
 gi|161332020|gb|EDQ02697.1| peptide chain release factor 2 [Shewanella benthica KT99]
          Length = 352

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 167/344 (48%), Positives = 230/344 (66%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD+D   +RL  ++ + E   +W +   A+ L +ER  L+  +  I ++   L D
Sbjct: 7   AFGGIFDYDAKKERLEEVSRELESSDIWNDPDNAQALGKERAALELIVKTIDDMDTGLED 66

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              L+ELA+EE D     + S  L  +   +   +F  + SG  D  ++YL++ +G+GGT
Sbjct: 67  VEGLVELAIEEADEETFNDASAELDGLDKRLADLEFRRMFSGPHDIANSYLDIQSGSGGT 126

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWANM+LRMY RW +   FK E +E+  G+ AGIK AT+   G  A+G L+ E GVH
Sbjct: 127 EAQDWANMVLRMYLRWGDAHDFKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVH 186

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS+ +RHTSF S++VYP +DD+IEI+I+ SD RIDTYRASGAGGQH+N T+S
Sbjct: 187 RLVRKSPFDSSGKRHTSFCSVFVYPEIDDTIEIDINPSDLRIDTYRASGAGGQHINKTES 246

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+ E     E +K++IGW
Sbjct: 247 AIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNEEKQAAEDAKSDIGW 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L 
Sbjct: 307 GSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGGLDMFIEASLK 349


>gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|167656758|gb|EDS00888.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum V10Sc8a]
          Length = 370

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 166/347 (47%), Positives = 229/347 (65%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L G  D DN    +  L  ++  P  W +V  ++ + ++     N +   +++++  
Sbjct: 18  LKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D + +LELA EEDD S+L E  +  +  + E+E ++  +LLSGE D N+A L  HAGAG
Sbjct: 78  DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  ML RMY  WAE+   K   L+  DGEEAGIKSA++L++G NAYG+LK E G
Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T
Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHIPTG+V  CQ ERSQH+N+  A  ML++KL E++ ++  +  +  +  + +I
Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L  
Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364


>gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
 gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
          Length = 338

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +  ++  ++RE ++L + +   +E++    D  +++++  EE+D S++ +  
Sbjct: 1   MEEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEENDASVIPDIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      +E  + + LLSGE D N+A L ++AGAGGTES DW +ML RMY RWAE++ 
Sbjct: 61  EMLDHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+  DG+EAGIKS T+ + G NAYG+L+ E GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FKYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++  +++E++  D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ
Sbjct: 181 DVMPDIEADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+    A        +IGWG QIRSYVLQPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG +D F+ A L  
Sbjct: 301 EESGNVDAVLDGSIDSFISAYLRW 324


>gi|138896684|ref|YP_001127137.1| peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
          Length = 327

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 222/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L   +   + + +R  +  +  EL  EE D  +  E  
Sbjct: 1   MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ ++++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
 gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
          Length = 375

 Score =  378 bits (970), Expect = e-103,   Method: Composition-based stats.
 Identities = 192/352 (54%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    D++ A  RL   +   EDP+LW +   A+ LMR+RQ L +A+   + I
Sbjct: 12  IRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   E D  ++ +  + L+ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  KQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA+ML RMY RWAE + +  E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG +V    E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 252 VNTTDSAVRITHVPTG-IVTTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT  E +  + VLDGDLD  M ATLA +
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLMSATLAQQ 362


>gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D]
 gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D]
          Length = 367

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 248/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L    D+D   +RL  ++ + E+P +W +   A+ L RE++ L+  +  + ++
Sbjct: 16  LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ 
Sbjct: 76  DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G  A+G+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E++
Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364


>gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
 gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
          Length = 375

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 226/353 (64%), Positives = 283/353 (80%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L G  DWD +++RL +LN K EDP LW +  +A+ +MRERQ LD++I+ +  
Sbjct: 11  EIQKAIQLLRGHLDWDQSLKRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L + + L+ +  EE D  I+ +  ++++ +K E++ +Q + LLSGEAD ND YLEV
Sbjct: 71  FTKTLEECIELIAMGEEESDVEIIADAENSIRNLKNEIDKRQIDVLLSGEADPNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGIKSAT+L+KG NAYG L
Sbjct: 131 HAGAGGTESQDWASMLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGML 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE+D RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSEADVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE  N  ES
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAES 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+G+LD F++A LA +
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALARR 363


>gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
 gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
          Length = 368

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 228/350 (65%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D      ++S L  + + P  W N   A+ +M+E  +    +     +
Sbjct: 12  LEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSYQQEKVKTYYTL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q +L D L L ++A+EE D S+  E  + +  ++  ++  + E LLSG  D N+A + +H
Sbjct: 72  QQQLDDMLTLYQMAVEEKDESLEPELEEGILALQQRLDGLELEILLSGPYDRNNAIVTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW +ML RMY R+ E+  +K E ++   G+EAGIKSATL   G NA+G+LK
Sbjct: 132 AGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGIKSATLSFAGENAFGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+GVHRLVRISP+D++ RRHTSF+S+ V P  ++D+ EI+I   D ++DTYRASGAGGQ
Sbjct: 192 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVRITH+PTG+VVQ Q ERSQ +N+A    +L+AKL EL+ +++E+  +    
Sbjct: 252 HVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EI WG QIRSYV  PY MVKD RTN E  +   V+DG++D F+ A L
Sbjct: 312 EQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEIDQFIAAYL 361


>gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
 gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
 gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
 gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
 gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
          Length = 341

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 170/339 (50%), Positives = 237/339 (69%), Gaps = 1/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 301 SYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 338


>gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
 gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
          Length = 367

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 242/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++ + +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LSQRNSDIRVYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + DN  L+++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ENGIADNRELIDMVVEENDADGFAAIVADVAALEQQMADLEFKRMFNQPADPNNCFVDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMYTR+AE++ FK E +E  DGE AGI +ATL I+G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQ Q  RSQH+N+     MLRAKL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRITHLPTGIVVQSQSSRSQHENRRIVMEMLRAKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|77359475|ref|YP_339050.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|123589557|sp|Q3ILD8|RF2_PSEHT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76874386|emb|CAI85607.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 365

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 234/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  +   L G  D+    +RL  +N + ED  +W     A+ L RE+  L+  +  I  
Sbjct: 13  EIRERTELLRGYLDYALKQERLEEVNAELEDSAVWNEPERAQALGREKSALEAVVETIDT 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D   LLELA+E +D     E    L  +  ++E  +F  + SG  DSNDAYL++
Sbjct: 73  LVTGTDDVEGLLELAVEAEDQETFDEAQSELADLNEQLEALEFRRMFSGPHDSNDAYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDW N+LLRMY RW E + FK E +E   G+ AGIK AT+   G  AYGWL
Sbjct: 133 QSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATGGDVAGIKGATVRFVGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+++ SD RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDMNPSDLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++       E 
Sbjct: 253 HVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG+LD F++A+L 
Sbjct: 313 SKSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGNLDKFIEASLK 362


>gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52787452|ref|YP_093281.1| hypothetical protein BLi03772 [Bacillus licheniformis ATCC 14580]
 gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
 gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52349954|gb|AAU42588.1| PrfB [Bacillus licheniformis ATCC 14580]
 gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
          Length = 327

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K + +   +  +  +L  E+ D  +  E  
Sbjct: 1   MADPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKEDPDQDLQNELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  NELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+IEI   D ++DTYRASGAGGQHVNTTDSAVRITH+PTGV+V CQ ERSQ
Sbjct: 181 DVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDSFIDAYLRSK 325


>gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis M50/1]
 gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis XB6B4]
          Length = 338

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P+ W + + ++  M+E + + + ++    ++    D   L+E+  EE+D S++ E  
Sbjct: 1   MEAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L       E  + ++LLSGE DS+ A + +HAGAGGTES DWA ML RMYTRWA  + 
Sbjct: 61  EMLDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DGEEAGIKS T  I G NAYG++K E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FSVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+  E A       TEIGWG QIRSYV+QPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DG +D F+   L  
Sbjct: 301 VETGNVDSVMDGKIDIFINGYLKW 324


>gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 377

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 191/352 (54%), Positives = 257/352 (73%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +  L    DW+ A  RL+ LN K EDP+LW +   A+ +MR+RQ L+ ++   K +
Sbjct: 12  IKEAIALLRRSLDWETAEDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q    D L L+EL   E D + + E    L+R+ LE   +  E++LSGEAD    Y+EVH
Sbjct: 72  QRDYDDALTLIELGEAESDEASVSEGEAALKRVDLEAHRRSVEAMLSGEADGMSTYVEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML RMY RW E+R +K + ++   GEEAGIKSAT  I G NA+GWLK
Sbjct: 132 AGAGGTESQDWASMLARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+ VYPV+DD+IE++I+ +D  I   R+SGAGGQH
Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVTVYPVIDDTIEVDINPADVDISFARSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR+ H P+G+V+  Q++RSQH+NK  A+  L+A+LYE+EL+KRE  AN  +++
Sbjct: 252 VNRTESAVRLVHKPSGIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQAA 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQ+VKDLRT  + T+PS+VLDGD+D F++A L+ +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALSQR 363


>gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 368

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/353 (46%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +  ++  +G   D ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     
Sbjct: 11  NMIEEVKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     + 
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              E  WG QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 311 EHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|323143525|ref|ZP_08078205.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
 gi|322416719|gb|EFY07373.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
          Length = 347

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/344 (49%), Positives = 235/344 (68%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD++   +RL  +N   EDP +W +  +A+ L +ERQ L + +S   ++     D
Sbjct: 2   LLGGIFDFETKKERLEEVNGLLEDPQVWNDPEKAQQLGKERQVLSSVVSRFDKLYSGFDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L+L EL  EE D   ++E      +++  +   +FE + S   D++D Y+++ +G+GGT
Sbjct: 62  VLMLFELGSEEGDEDSIKEAYSEADKLEEVLNALEFERMFSKPNDNSDCYMDIQSGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA M++RMY ++ EK  F    +E  +GE AGIKSATL   GP A+GWL+ E G+H
Sbjct: 122 EAQDWAEMVMRMYLKFGEKHGFDCTVIECSEGEVAGIKSATLKFAGPYAFGWLRTETGIH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DSN+RRHTSF S +VYP +D+ I++EI+ +D +ID +R+SGAGGQHVN T+S
Sbjct: 182 RLVRKSPFDSNNRRHTSFCSAFVYPEIDNDIKVEINPADLKIDVFRSSGAGGQHVNKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTGVVV CQ ERSQ +N+ QA   LRAKLYELEL+K++      E SK +IGW
Sbjct: 242 AVRITHIPTGVVVSCQNERSQFQNRDQAMKQLRAKLYELELRKQQSEQQAIEDSKADIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     VKDLRT +E      VL+GDLD F++A+L 
Sbjct: 302 GSQIRSYVLDD-ARVKDLRTQVECRDTQRVLNGDLDQFIEASLK 344


>gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|67461157|sp|Q71WR9|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 366

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 229/351 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLD+F+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 364


>gi|294788774|ref|ZP_06754015.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
 gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
          Length = 367

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++   +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  +
Sbjct: 16  LAQRNRDIRDYMDYQGKKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + DN  L+++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ENGIADNRELIDMVVEENDTDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK + LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D+N++RHTSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDANNKRHTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  MLR+KL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749421|sp|Q6GIN7|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
          Length = 369

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 224/350 (64%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ L  + G  D +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q
Sbjct: 14  NQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQ 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D     +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H 
Sbjct: 74  AEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWANML RMY R+ EK+ FK + ++   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQH 242
           E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          
Sbjct: 254 INKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGE 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L 
Sbjct: 314 QKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363


>gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42]
 gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY]
 gi|229576664|sp|A1W9H4|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790913|sp|B9MBK7|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp.
           JS42]
 gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
          Length = 367

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 239/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  ++++
Sbjct: 16  LTERTQELRRYLDYDAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ EE D + L       ++++  +E  +F  + S EAD  + ++++ 
Sbjct: 76  TTELADNAELYEMSKEEGDEAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ SD R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPSDVRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E     E +
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364


>gi|323706500|ref|ZP_08118060.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534162|gb|EGB23953.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 327

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 155/325 (47%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W ++ + + L ++++ L   IS  + ++ +  D   L+EL LEE D S+ QE  
Sbjct: 1   MSEPDFWNDLEKFQELSKKQKDLKEIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVH 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  + +  ++   + ++LLSG  D N+A L +HAGAGGTE+QDW  MLLRMY RWA  + 
Sbjct: 61  EEYKALSKKINDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G++AG+KS T+++KGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 YDVETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD I+++I   D +IDTYR+SGAGGQHVN T+SA+RITHIPTG++VQCQ ERSQ
Sbjct: 181 EVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL ++ +++++E     +    E GWG QIRSYV QPY +VKD RTN
Sbjct: 241 MQNRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + + V+DG++DDF+ A L  K
Sbjct: 301 FEVGNVNAVMDGEIDDFINAYLKQK 325


>gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 338

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 157/324 (48%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W N  ++  ++RE ++L + +   +E++    D  +++++  EE+D S++ E  
Sbjct: 1   MEEPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYEENDASLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      +E  + + LLSGE DSN+A L ++AGAGGTES DW +ML RMY RWAEK+ 
Sbjct: 61  EMLGHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE L+  DG+EAGIKS T+ I G NAYG+L+ E GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FKTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + + I+IEI+  D RIDTYR+SGAGGQH+N T SA+RITH P+G VV CQ ERSQ
Sbjct: 181 DIMPDIQEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML++KL+ L+ +++   A        + GWG QIRSYVLQPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKSKLFLLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG++D F+ A L  
Sbjct: 301 EESGNVDAVLDGNIDSFISAYLRW 324


>gi|120597725|ref|YP_962299.1| peptide chain release factor 2 [Shewanella sp. W3-18-1]
 gi|146294138|ref|YP_001184562.1| peptide chain release factor 2 [Shewanella putrefaciens CN-32]
 gi|120557818|gb|ABM23745.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           W3-18-1]
 gi|145565828|gb|ABP76763.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           putrefaciens CN-32]
          Length = 352

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 172/343 (50%), Positives = 232/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
 gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
          Length = 371

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +++ L G  + D+  +R+  L   T  P  W +   A+ ++R R  ++  ++  + 
Sbjct: 11  ELTERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL  EE D + L E +    +++  V   +F  +LSG  D++ A++ +
Sbjct: 71  LDKQARDIKELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA MLLRMY R+ EK+ +KTE  +  +G+ AG+K  T  + G  AYG+L
Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
           K E G+HRLVRISP+DS++RRHTSF+S +V+PV  ++ IEI+I+ESD RIDTYR+SGAGG
Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+   
Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+   L 
Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFVVPYLM 362


>gi|67461211|sp|Q8Y4D8|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 228/351 (64%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T]
 gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 367

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 240/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D    +L  +N   EDP +W N   A+ L +E++ L++ +  +++I
Sbjct: 16  LAARGRELRRYLDYDVKASKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L ELA  EDD    +    +L  ++  +E  +F  + S   D N+ ++E+ 
Sbjct: 76  DAQSRDLKDLFELAEAEDDDDTFEAVEADLVELQGAIEKLEFRRMFSNPMDPNNCFIEIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML RMY R+ EK+ F  E +E  +GE AGIK+ T+   G  AYG+L+
Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQHKNKA+A +ML+A+LYE EL+KR+      E S
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L 
Sbjct: 316 KSDIGWGHQIRSYVL-DQSRIKDLRTNYEVGNTQAVLDGDLDDFIGASLK 364


>gi|296127692|ref|YP_003634944.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
 gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
          Length = 367

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/353 (46%), Positives = 232/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +  Q   L G  D D+  +R+  ++  +     W + I+A+ LM+ER  L + I  ++ 
Sbjct: 12  NIKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKIEPVEN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +   L+E+A+E +D  + +E       ++   +  + ++L SGE DS +AYL +
Sbjct: 72  LIKNSNNIYELVEMAIESNDIEMEKELEGECIELQRVFDELETKNLFSGEFDSKNAYLTL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+EAGIK  +  ++G  AYG+L
Sbjct: 132 NAGAGGTESCDWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI+ SD R+DTYRASGAGGQ
Sbjct: 192 RSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINPSDLRVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+AKLY+LE  K ++       
Sbjct: 252 HVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKIAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG++D+F+ A L  +
Sbjct: 312 EKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLKQQ 364


>gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
 gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
          Length = 343

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/336 (49%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + +S    K  +P  W +  +A+ ++ E   L       K + D + +  + LEL   
Sbjct: 1   MNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLEM 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +  E  D L +    +   +   LL+G+ D+N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADPDVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+ +FK +  +   GE AGI S T+ + G NAYG+L+ E+GVHRLVR+SP+DS
Sbjct: 121 RMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVRLSPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DDS+E+ I+  D R+D YR+SGAGGQH+N T SAVRITH+PTG
Sbjct: 181 AGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV  Q ERSQ +N+  A NML+AKL+ELE QK+ E     E ++ EIGWG QIRSYV  
Sbjct: 241 IVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN+E  +   V+DGDLDDF+ A L  K
Sbjct: 301 PYSMVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 336


>gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
 gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
          Length = 327

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P+ W +   A+ ++ E   L + +     +++R  +  +  EL  EE D  +  E  
Sbjct: 1   MAAPNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  EEAKKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ +L++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
 gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
          Length = 356

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/348 (47%), Positives = 222/348 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GGLFD D   + ++    K  +P  W + + A+ ++     L +      +++D +
Sbjct: 2   LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVKLRDNI 61

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +    +EL   E D  +  E   +    + E+E  +   LL GE D+ +A LE+H GAG
Sbjct: 62  GNLQTSIELLELEPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RW E+  F  E      GEEAGIKS TLLIKG NA+G+L+ E+G
Sbjct: 122 GTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGYLRSEKG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+  RRHTSF+S+ V P +D+S+ I+I  SD R+DT+R+SGAGGQH+N T
Sbjct: 182 VHRLVRISPFDAAGRRHTSFASVDVMPELDESVNIDIDPSDLRVDTFRSSGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIPTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 242 ESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLEI 301

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           GWG QIRSYV  PY +VKD R+  E  +   V+DGDLD F+ A L  K
Sbjct: 302 GWGSQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYLQWK 349


>gi|296111417|ref|YP_003621799.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
 gi|295832949|gb|ADG40830.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
          Length = 372

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 223/354 (62%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   +       D +   + ++    +  +P  W + ++A+ ++ E   L N       
Sbjct: 12  EIKENITRFRSTLDLEALTEEIADFENRMTEPGFWDDNVKAQKVIEENNVLKNRRDSFLN 71

Query: 62  IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + ++  +  +L+E+  E+ DD  +L E  +N+ +I+ +VE    E LL+   D+N+A LE
Sbjct: 72  LTNQAEEIDVLIEMLSEDPDDVEMLAELEENVAKIQKDVEAYNLEQLLTEPYDANNAILE 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VH G+GGTES DW   L RMYTRWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+
Sbjct: 132 VHPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGF 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E+GVHR VRISP+DS  RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGG
Sbjct: 192 LRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L+ KLY+LEL+K+E       
Sbjct: 252 QNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALT 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 312 GEKLENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
 gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
          Length = 375

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 195/350 (55%), Positives = 244/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D++ A  RL   N + EDP LW +   A+ LMR+RQ L +AI   + I
Sbjct: 12  IEKSLVLLAQRLDYETAPYRLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L  +K     K+ E+LL GEAD+ND +LE++
Sbjct: 72  SQELADNVELIELGEMEDDADVVTEAETALATLKDAAAQKELEALLDGEADANDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK  +K E      G+EAGIKSA+  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD  M ATLA
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLA 360


>gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J]
 gi|238691788|sp|B2U8V1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J]
          Length = 367

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 248/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L    D+D   +RL  ++ + E+P +W +   A+ L RE++ L+  +  + ++
Sbjct: 16  LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ 
Sbjct: 76  DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G  A+G+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E++
Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364


>gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
 gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
          Length = 386

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 172/345 (49%), Positives = 236/345 (68%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  ++++   L 
Sbjct: 40  QIYGGIFDYDAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELA 99

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           DN  L E++ EE D + L        +++  +E  +F  +   EAD  + ++++ AGAGG
Sbjct: 100 DNAELFEMSKEEGDETGLLTIEGETAKLQPLIEELEFRRMFGKEADPLNCFVDIQAGAGG 159

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+ E GV
Sbjct: 160 TEACDWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGV 219

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSF+S++VYP +DDSI+IEI+ SD R DTYRASGAGGQH+N TD
Sbjct: 220 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTD 279

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +KT++G
Sbjct: 280 SAVRLTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVG 339

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 340 WGHQIRSYVL-DNSRIKDLRTNVEISATQKVLDGDLDAFIEASLK 383


>gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
 gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
          Length = 365

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L G  D+D   +RL+ +  + EDP +W N   A+ L +ER  L+  ++ + EI
Sbjct: 14  LKSRQDALRGYLDFDTKQERLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LL+LA+EEDD   ++  + +L   +  V   +F  + SGE D N+A+L++ 
Sbjct: 74  AAGIDDAAELLQLAVEEDDEDSVESVAADLAHYESVVAEMEFRRMFSGEMDPNNAFLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA ML RMY RW E++ FKTE +E   GE AGIKSAT+  +G  AYGWL+
Sbjct: 134 AGSGGTEAQDWAQMLERMYLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I+I+I+ +D R D YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIDINPADLRTDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PTG+VVQCQ +RSQH N+      LRAKLYELE+QKR       E S
Sbjct: 254 VNRTESAVRITHLPTGIVVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDS 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRTN+E  +P  VLDGDLD F++A+L 
Sbjct: 314 KSDIGWGSQIRSYVL-DQSRIKDLRTNVETGNPQAVLDGDLDMFIEASLK 362


>gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille]
 gi|166223628|sp|A6SXF4|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 367

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/350 (51%), Positives = 244/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D   ++L  +N + EDP +W +   A+ L +E++ L+  +  + +I
Sbjct: 16  LTTRATELRRYLDFDVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   L E+A EE D   +    ++ Q +   VE  +F  + S   D+N+ ++++ 
Sbjct: 76  DSELNDARDLFEMAREEKDEDTIVAIENDAQELLKLVEGMEFRRMFSNPMDANNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA+MLLR Y R+ E++ FK E LE  DGE AGIK+ATL ++G  AYG+L+
Sbjct: 136 AGAGGTEAQDWASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS + RHTSFSS++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSANGRHTSFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+TH P+G+VVQCQ +RSQH+NKA+AW+ML+AKL+ELE++ R       E S
Sbjct: 256 INKTDSAVRLTHGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNFETGNTKAVLDGDLDDFIAASLK 364


>gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5]
 gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5]
          Length = 367

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 198/352 (56%), Positives = 247/352 (70%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++       D     +RL+ L    EDP LW +  +A+ ++RE + L +A++   EI
Sbjct: 12  MEEKVEFFRRCLDVPAKEERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADFNEI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +L E   E  D S + E + NL +++  V   +   LLS E D ++AYL ++
Sbjct: 72  HRLLEDVKVLHEFCQE--DESNVDELTQNLAKLEKLVADYELTVLLSDEHDPSNAYLTIN 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDW +ML+RMYTRWAEKRKFK   +E  +GEEAGIKS TL I+G  AYG LK
Sbjct: 130 AGAGGTESQDWGSMLMRMYTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYAYGNLK 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++V P +DDSIE++I ESD RIDTYR+SGAGGQH
Sbjct: 190 SETGVHRLVRISPFDSNARRHTSFTSVFVSPEIDDSIEVDIRESDLRIDTYRSSGAGGQH 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTGVV QCQ ERSQH+NK QA  MLRAKLYELEL+K+ +     E S
Sbjct: 250 VNTTDSAVRITHTPTGVVTQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGLREVEDS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIRSYVL PY+MVKDLRT  E  +   VLDG LD+F+KA L  +
Sbjct: 310 KMDIAWGSQIRSYVLHPYKMVKDLRTRHETGNAEAVLDGALDEFIKAYLQWQ 361


>gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
 gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
          Length = 329

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 222/326 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+   ++   L   +    ++   + D   L E+A EE+D S+L E  
Sbjct: 1   MGDPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAEENDESLLPEMD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L + + E+E+ +   LLSGE D+N+A L +HAGAGGTE+QDW +MLLRM+TR+AE+  
Sbjct: 61  ELLAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRFAEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   G+EAG+KSAT+ + G NAYG+L+ E+GVHRLVRISP+D+N+RRHTSF+++
Sbjct: 121 FALEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++++ I+  + R+D YR+SGAGGQHVN T SAVR+TH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPELDDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ +   MLRAKLYE E  K++ + +        I WG QIRSYV QPY MVKD RT 
Sbjct: 241 IQNRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V+DGDL  F++A L  ++
Sbjct: 301 CETGNIQAVMDGDLMPFVEAYLRSQQ 326


>gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 367

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/350 (47%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++   +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  ++ I
Sbjct: 16  LAQRNTDIRAYMDYQGKKERLEEVVGLSEDPELWNDPKRAQDIGKERKLLEGIVLTLENI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + DN  L+++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ENGIADNRELIDMVVEENDEDGFAAIVADVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMY R+AE++ FK E +E  DGE AGI +AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYLRYAERKGFKVEVVEQDDGEIAGINNATIRLEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQ Q  RSQH+N+     MLRAKL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHENRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364


>gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
          Length = 341

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 169/339 (49%), Positives = 237/339 (69%), Gaps = 1/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ F+ E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 121 AGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 301 SYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 338


>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 330

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 230/325 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A+EEDD S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ I+  VE ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  EYVKAIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAG KS+T LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ EI      +   I WG QIRSYV  PY +VKD RTN
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAEIKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD F++  L  +
Sbjct: 301 VETGNVQAVMDGNLDQFIEGFLKKE 325


>gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
 gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
          Length = 349

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 249/344 (72%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD      RL  +  ++EDP LW++   A+ L RER  L+  +  ++E+  +L D+
Sbjct: 5   LGGIFDLPGKAARLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRDS 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             ++ELA+ E D ++L+  + +L+  +  VE  +F+ + SG  D  DA++++ AGAGGTE
Sbjct: 65  AEMVELAVAEQDEALLEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY  W E R F TE +E+ +GE AGIKSA+L ++G +A+GWL+ E GVHR
Sbjct: 125 AQDWANMLLRMYLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++VYP +DDS EIEI+ +D ++DTYRASGAGGQHVN TDSA
Sbjct: 185 LVRKSPFDSGNRRHTSFASVFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VV CQ +RSQHKN+A+A  MLR+KLYELE+QKR       E +K++IGWG
Sbjct: 245 VRLTHIPTGIVVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E      VLDGDLD F++A L  
Sbjct: 305 HQIRSYVL-DQSRIKDLRTGVEVGDTQRVLDGDLDGFVEAALKA 347


>gi|229541533|ref|ZP_04430593.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
 gi|229325953|gb|EEN91628.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
          Length = 327

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/324 (51%), Positives = 224/324 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W +  EA+ ++ E   L   ++  +E++ +  D  +  ELA EE+D  + +E  
Sbjct: 1   MLEPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKEENDSELKEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+    ++   + + LL+G  D+N+A LE+H GAGGTESQDW +MLLRMYTRW EK+ 
Sbjct: 61  AELEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRWGEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TLL KG NAYG+LK E+G+HRLVRISP+D+  RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+   D R+DTYRASGAGGQH+N T SAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 EVMPEIDDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  ML+AKLY+ E++++E+        + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DG++D F+ A L  
Sbjct: 301 VETGNVQAVMDGEIDPFIDAYLRA 324


>gi|119476451|ref|ZP_01616802.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
 gi|119450315|gb|EAW31550.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
          Length = 364

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 178/359 (49%), Positives = 251/359 (69%), Gaps = 8/359 (2%)

Query: 2   KLSRQLNC-------LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +L+++L          GG+FD+D   ++L+ +  +  +P +W +   A+ L ++R  LD 
Sbjct: 5   RLNKRLKICLKGRKIFGGIFDYDIRKEQLTEVELELGEPAVWDDPGRAQELGKQRAALDI 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +S I ++   + D   LLE+A+EEDD   + E  + LQ +   +   +F  + SGE D+
Sbjct: 65  VVSTIDKLTVGVSDVAELLEMAVEEDDADTVMEIENELQLLNQHLATLEFRRMFSGEMDA 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+A+LE+ +G+GGTE+QDWA M+ RMY RW E + F TE +E  DG+ AGIKSAT+   G
Sbjct: 125 NNAFLEIQSGSGGTEAQDWAEMICRMYLRWGESKGFSTELMEASDGDVAGIKSATIRFSG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E GVHRLVR SP+DS SRRHTSF+S++V P +D+ I+IEI+ SD R DTYR
Sbjct: 185 EYAFGWLRTETGVHRLVRKSPFDSGSRRHTSFASVFVSPEIDEDIDIEINPSDLRTDTYR 244

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH+N+  A   L+AKLYE+E+ KR E
Sbjct: 245 ASGAGGQHVNKTDSAVRITHEPSGIVVQCQSQRSQHQNRDFAMKQLKAKLYEMEMLKRNE 304

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            A   E +K +IGWG QIRSYVL   Q +KDLRT+++ ++ ++VLDGDLD F++A+L +
Sbjct: 305 AAQAQEDNKADIGWGSQIRSYVLDD-QRIKDLRTHVQTSNCNNVLDGDLDLFIEASLKM 362


>gi|262198721|ref|YP_003269930.1| hypothetical protein Hoch_5555 [Haliangium ochraceum DSM 14365]
 gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
          Length = 378

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 231/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  LGG+FD D    R+  L + + DP  W N  +A+  +RE + + + +    +
Sbjct: 22  ELENTLEELGGIFDVDEKRLRIEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDK 81

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D ++LLELA + +D     E     + I+  ++  +F  +LSGE D   A L++
Sbjct: 82  LSSKLADAVVLLELAEDAEDAESAIEARTAAEEIERSLDELEFRRMLSGEYDQGGAVLQI 141

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGG ++ DWA MLLRM  R+A+ + +K E L+    EEAGIKSATL+I G  AYG L
Sbjct: 142 NSGAGGVDAADWAQMLLRMILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLL 201

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+ +RR TSF+++ V P +DDS+ ++I E + RID YRA GAGGQ
Sbjct: 202 KAEMGVHRLVRISPFDAQARRQTSFAAVTVSPDIDDSVHVDIDEGELRIDVYRAGGAGGQ 261

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+P+G+VVQCQ ERSQHKNKA A  +LR++LY+    +R+  A     
Sbjct: 262 HVNKTESAVRITHLPSGIVVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAP 321

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYVL PY+ V D RT+++  +   VLDGDLD F++  L  +
Sbjct: 322 EKKKIEWGSQIRSYVLAPYRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYLLSE 374


>gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
 gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
          Length = 375

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 207/352 (58%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL  +N   ED  LW +   A+ LMRERQ L +AIS  K I
Sbjct: 12  IGRSLALLGQRMDVETAPHRLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  I+ E    L+ +      K+ E+LL GEAD ND +LEV+
Sbjct: 72  ETGLRDNVELIEMGEAEGDAEIVSEAEQALRDLVELARGKELEALLDGEADGNDTFLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E   + DGEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I   D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPAGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+      LRA+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREACMVALRARLYQLELDKRNAAVNAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM ATLA+ 
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMAATLAMD 362


>gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
 gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
          Length = 327

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 222/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L   +   + + +R  +  +  EL  EE D  +  E  
Sbjct: 1   MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ ++++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAINMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
 gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
          Length = 327

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLSESHEELQMTHDLLKEEPDEELQLELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG++K E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDVFIDAYLRSK 325


>gi|281185482|sp|Q0TNE1|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium
           perfringens ATCC 13124]
          Length = 362

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 158/350 (45%), Positives = 229/350 (65%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G      +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 12  ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL  EE+D    +E    ++ +  E++  + E++LSGE D NDA L +
Sbjct: 72  LNERIDDVEVLKELM-EENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+DGD+D+F+ A L
Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
 gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
          Length = 375

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 236/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D D  VQ ++ L      P  W ++  ++ ++++   L N I+  ++I
Sbjct: 19  LKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRLKNTIAEFEKI 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   L+E A EEDD S   E   NL+ I+ +V+ ++  +LLSGE D+N+A L  H
Sbjct: 79  ESLYEDTQTLVEFAFEEDDESCSDEVKANLKSIQDQVDAQRLATLLSGEYDANNAILTFH 138

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DW  ML RMY+ WAE+  F+T+ L+  +GEEAGIKS ++LI G NAYG+LK
Sbjct: 139 AGAGGTEAMDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISILIVGTNAYGFLK 198

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+DS+ RRHTSF+S+ V P VDDSIE+EI   D R+DTYR+SGAGGQH
Sbjct: 199 SETGVHRLVRVSPFDSSGRRHTSFASLEVIPEVDDSIEVEIRPEDLRVDTYRSSGAGGQH 258

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH+PTG+V  CQ ERSQ +N+A A  ML++KL E++ ++  +  +  +  
Sbjct: 259 VNKTESAIRITHLPTGIVTACQNERSQMQNRAVAMKMLKSKLIEIKEREHLDKISDIKGE 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EI WG QIRSYV  PY +VKD RT  E  + S V+DGDLD F+ A L  K
Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINAYLVAK 370


>gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 327

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   + + ++  K++ D   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGIKDYVNSYKKLNDSHEELQMTHDLLKEEPDSDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325


>gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025]
 gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 375

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 201/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IKRSLELLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E    ++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDTEIVTEAEAAIRTLVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  ++ RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANEIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY++EL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQMELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
 gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
          Length = 367

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 174/350 (49%), Positives = 236/350 (67%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D   +RL  +N   EDP++W +  +A+ L +E++ LD  +  ++++
Sbjct: 16  LANRTQELRRYLDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ EE D + L        ++   +E  +F  + S EAD  + Y+++ 
Sbjct: 76  TAELADNAELYEMSREEGDEAGLLAIEGEAAKLLPLIEELEFRRMFSKEADPLNCYIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+
Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI I+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDT 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364


>gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
 gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
          Length = 327

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325


>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
 gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
          Length = 330

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 232/325 (71%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A++EDD S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +++I+  +E ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT+
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD F++  L  +
Sbjct: 301 VETGNVQAVMDGNLDPFIEGFLKKE 325


>gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
 gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
          Length = 348

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/346 (50%), Positives = 243/346 (70%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +N   EDP +W +   A+ L +E++ L++ +  IK +   L
Sbjct: 1   MKSCGGIFDYDQKERRLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D L L E+A EEDD + L+    ++  +K EVE+ +F+ + + E D  + +LE+ AGAG
Sbjct: 61  SDALELFEMAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+ML RMY ++AE++ FK E +E  +G+ AGIK  T+ I G  AYGWL+ E G
Sbjct: 121 GTEAQDWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+  T
Sbjct: 181 IHRLVRKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+V   Q  RSQH+NK +A  +L+++LYE EL+KR+      E +K++I
Sbjct: 241 DSAVRITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYVL     VKDLRTN+E  + + VLDG L+ F++A+L 
Sbjct: 301 SWGHQIRSYVL-DQSRVKDLRTNVETGNTTAVLDGALESFIEASLK 345


>gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii]
          Length = 371

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 166/348 (47%), Positives = 214/348 (61%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GGLFD+DN  + +     K  +P  W N  +A+ L+ E   L         ++  L
Sbjct: 17  LTTSGGLFDFDNISESIEINEAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D    LEL   E D  + ++T D L +++ E    +   LLSGE D ++A +E+H GAG
Sbjct: 77  TDEETALELLRLEADADLQKDTEDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW NMLLRMY R+ + R  K E      G+EAG+KS ++ I G NAYG LK E G
Sbjct: 137 GTEAMDWGNMLLRMYQRYCDSRGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS  RRHTSF+S+ V P VDDSIEI+I   D RID YR+SGAGGQH+N T
Sbjct: 197 VHRLVRISPFDSAKRRHTSFASVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHIPTG+V   Q +RSQ +N+  A N +RAKL+ LE +K+ +     +  + +I
Sbjct: 257 SSAVRITHIPTGIVTTSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSYV  PY MVKD RT  E      V+DG LD F+ A L  +
Sbjct: 317 AWGSQIRSYVFHPYSMVKDHRTGYETADVGGVMDGKLDPFIYAYLQWR 364


>gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
 gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
          Length = 353

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 178/345 (51%), Positives = 240/345 (69%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD +N  + ++  N +  +P  W++  +A+ ++ E   L    +   ++     D 
Sbjct: 3   LGGLFDLENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKEDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            +LLE+  EE+D  + +E +  +     +++  + + LLS   D N+A +E+H GAGGTE
Sbjct: 63  ELLLEMVKEENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDW ++LLRMYTRWAEKR FK E L    G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 123 SQDWGSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF SI V P +DDS++I+I+  D +IDTYRA+GAGGQH+NTTDSA
Sbjct: 183 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKIDTYRATGAGGQHINTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+GVVV  Q +RSQ KN+ QA +ML+AKLY+LE++++E+        + EIGWG
Sbjct: 243 VRITHIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAIRGEQLEIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV  PY MVKD RTN E  + + V+DG +D F++A L  K
Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSK 347


>gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
 gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
          Length = 347

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/345 (50%), Positives = 243/345 (70%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           CLGG+FD+D   ++L+ +  +  +P +W +   A+ L +ER  L+  +  I+ +   + D
Sbjct: 2   CLGGIFDYDAKQEQLAEVELELAEPEVWNDPARAQALGQERASLEAIVGTIQTLDTGVVD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LL++A+EE D SIL +  D +  +  ++   +F  + SGE D+N+AYL++ +G+GGT
Sbjct: 62  ARELLDMAVEEGDESILIDVQDEIDVLSAQLGKLEFRRMFSGETDANNAYLDIQSGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA M+LRMY RW E R FKT   E   G+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWAEMVLRMYLRWGEARGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS+SRRHTSF S++V P +DD+ E+++ +S+ R DTYRASGAGGQHVN TDS
Sbjct: 182 RLVRKSPFDSSSRRHTSFCSVFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH  +G+VVQCQ +RSQH+N+  AW MLRA+LYE ELQ+R       E +K++IGW
Sbjct: 242 AVRLTHEASGIVVQCQSQRSQHQNRDTAWKMLRARLYEQELQRRNADKQAQEDNKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYVL   Q +KDLRTN++ ++   VLDG LD F++A+L  
Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCQAVLDGSLDQFIEASLKA 345


>gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1]
 gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1]
          Length = 375

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 200/353 (56%), Positives = 264/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++RL  LN + +DP LW +  EA+ + RE++ L++A++ + E
Sbjct: 11  RIEAALALVRQSLDWERALRRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAVNTVNE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +E+   E + SI+ +   +L+++    +  + ++LLSGEAD ND YLE+
Sbjct: 71  ISAEMGDAVEFIEMGEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGNDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDNAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD I+IEI+ +D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSAAKRHTSFSSVWVYPVIDDDIDIEINPADLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKN+A A NML+A+L+E E+ +RE  A+    
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K+EIGWG QIRSYVLQPYQMVKDLRT +  +SP  VLDGD+DD++ A LA +
Sbjct: 311 EKSEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALAQR 363


>gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804]
 gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii]
          Length = 337

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 168/334 (50%), Positives = 241/334 (72%), Gaps = 1/334 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  +N + EDP +W +   A+ L RE++ L++ ++ +  ++  + D L L ELA  
Sbjct: 2   KAERLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELASA 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +DD + L+    +    + ++E  +F  + S  AD  + +L++ AGAGGTE+QDWA+MLL
Sbjct: 62  DDDDATLESIESDADGFQQQLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           R Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ E GVHRLVR SP+DS
Sbjct: 122 RQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           +  RHTSF+S++VYP VDDS EI+++ +D R+DTYRASGAGGQH+N TDSAVR+TH+PTG
Sbjct: 182 SGGRHTSFASVFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT++GWG QIRSYVL 
Sbjct: 242 IVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVL- 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 301 DQSRIKDLRTNVEISNTQKVLDGDLDTFIQASLK 334


>gi|73914009|sp|Q9CP66|RF2_PASMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +
Sbjct: 14  LTERTQVLRGYLDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D +   E    L+ ++ ++   +F  + SG+ D+ D Y+++ 
Sbjct: 74  DQGLEDVEGLLELAIEAEDEATFHEAVAELEELEQQLAKLEFRRMFSGQHDAADCYVDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AGIKSAT+ + G  A+GWL+
Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+I+I+ +D RID YRASGAGGQH
Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q    L+AKLYE+ELQK+       E +
Sbjct: 254 VNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|319942340|ref|ZP_08016655.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
 gi|319804213|gb|EFW01113.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
          Length = 354

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/344 (49%), Positives = 236/344 (68%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD D   +RL  +N + E+P LW +   A+ + +E++ LD+ +     +   + D
Sbjct: 2   NFGGIFDVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIAD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              L EL+L E+D   L+   +++ RI+ EV   +F+ + +   DS + YLE+ +GAGGT
Sbjct: 62  AGELFELSLAEEDFDSLEVIGEDVDRIEHEVAQLEFKRMFNQPMDSANCYLEIQSGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA+ML RMY R+AE++ FK    E   GE AGIKS TL I+G  AYG L+ E G+H
Sbjct: 122 EAQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGIH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+D+N+RRHTSF+S++VYP VDDSI+IEI+ +D  ID +RASGAGGQH+  T+S
Sbjct: 182 RLVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRI H PTG++  CQ +RSQH+N+ +A   L+AKLYELE++KR E     E SK++IGW
Sbjct: 242 AVRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     VKDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GHQIRSYVL-DQSRVKDLRTGVETGNTGGVLDGDLDQFIEASLK 344


>gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA]
          Length = 343

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 157/336 (46%), Positives = 225/336 (66%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  Q++  L  + E P  W +   ++  M+E + + + +   + +  ++ D   ++E+  
Sbjct: 3   NKEQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGY 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE+D +++ E  + L   + + +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML
Sbjct: 63  EENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+RWA+K+ F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP++
Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  +R TSF S  V P +   +++EI++ + RIDTYR+SGAGGQH+N T SA+RITH PT
Sbjct: 183 AAGKRQTSFVSCDVMPDIKKDLDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQH NK +A  ML+AKLY L+ Q+ EE  +      T+IGWG QIRSYV+
Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVM 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QPY MVKD RTN E  +   VLDG +D F+ A L  
Sbjct: 303 QPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 338


>gi|70728519|ref|YP_258268.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           fluorescens Pf-5]
 gi|68342818|gb|AAY90424.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens
           Pf-5]
          Length = 364

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D   +RL+ +N + EDP +W     A+ L RER  L   +  + E+
Sbjct: 13  LSERSETIRGYLDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A+EE+D   + +    L R++  +   +F  + S E D N+AYL++ 
Sbjct: 73  NGGLADCRDLLDMAVEEEDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +
Sbjct: 253 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D++++A+L 
Sbjct: 313 KSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 361


>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
 gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
          Length = 377

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 161/352 (45%), Positives = 238/352 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +  +++ LG     D A   +  L  K      W ++  ++ ++++ + L + I+  + 
Sbjct: 16  NMRPEIDDLGRALGLDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQLKDKIASYEA 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +  D L L+ELA EE+D S+L E ++ +  ++ +++  +  +LL+GE D+ +A L  
Sbjct: 76  LRRKTDDTLALIELADEEEDLSVLAEAAEAVDSVRAQIDTMRLATLLTGEYDAKNAILTF 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDWA ML RMYTRWAE+  F  + L+  DGEEAG+KSA++LI+G NAYG+L
Sbjct: 136 HAGAGGTEAQDWAEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASVLIEGLNAYGYL 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+DS+ RRHTSF+S+ V P +DDSIE++I   D ++D +R+SGAGGQ
Sbjct: 196 KSEIGVHRLVRVSPFDSSGRRHTSFASVEVMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVR+TH+PTG+VV CQ ERSQH+N+  A  ML++KL E++ ++  +     + 
Sbjct: 256 HINKTSSAVRLTHLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKEREHYDKIEDIKG 315

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            + EI WG QIRSYV  PY +VKD RT+ E  +   V+DGDLD F+ A L  
Sbjct: 316 VQKEIAWGSQIRSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINAYLKA 367


>gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
 gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
          Length = 354

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 160/345 (46%), Positives = 211/345 (61%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   + +     K   P  W N  +A+ L+ E   L        ++Q    D
Sbjct: 2   TLGGLFDLDAIDESIEINENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
               +EL  EE D  + +E   +L  ++ +    + + LLSG+ DS++A +E+H GAGGT
Sbjct: 62  ETTAVELLREEPDPDLQKEVEADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+ DW  MLLRMY R+ +   FK E  +   GEEAG+KS +  I G NAYG LK E GVH
Sbjct: 122 EAMDWGQMLLRMYQRYCDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+  RRHTSF+S+ V P VDDSI+I+I   D R+D YR+SGAGGQH+N T S
Sbjct: 182 RLVRISPFDAAKRRHTSFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+V   Q +RSQ +N+  A N LRAKL+ LE +K+ +     +  + EIGW
Sbjct: 242 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYV  PY +VKDLRT  E      V+DG L  F+ + L  
Sbjct: 302 GSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 346


>gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
 gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
          Length = 327

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ ++ E   L + ++   ++ +   +  +  EL  EE D  + QE  
Sbjct: 1   MAEPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKEEPDQELQQELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 CKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+IEI   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325


>gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577]
          Length = 359

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 171/345 (49%), Positives = 245/345 (71%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +R   ++   EDP +W++   A+ L RE++ LD  +  ++ I+ +L 
Sbjct: 13  QSFGGIFDFDAKKERSDEISFLEEDPEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQ 72

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D++ L ++A EE+D  +L+    +  +++  V   +F ++ S   D N+ +LE+ +G+GG
Sbjct: 73  DSIDLFQMAKEENDIVVLESIRADAAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGG 132

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY R+ E+R +K E LE   GE AGIKSA+L I G  AYG+L+ E G+
Sbjct: 133 TEAQDWAAMLERMYLRYCERRDYKVEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGI 192

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS SRRHTSF+S+++YP VDD+IEIEI+ +D R+DTYRASGAGGQH+N TD
Sbjct: 193 HRLVRKSPFDSGSRRHTSFASVFIYPEVDDTIEIEINPADLRVDTYRASGAGGQHINKTD 252

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH P+G+VV CQ +RSQH+N+A+A  ML+++LYE+EL+K+ +     E SKT+IG
Sbjct: 253 SAIRITHNPSGIVVSCQNDRSQHRNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIG 312

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRT +E  +   VLDG LD+F+K +L 
Sbjct: 313 WGHQIRSYVL-DQSRIKDLRTGLEIGNTQGVLDGGLDEFIKTSLK 356


>gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131]
 gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides
           KD131]
          Length = 375

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 204/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  K I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYKLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E    ++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEAAIRALVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
 gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
          Length = 349

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/342 (50%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D  V+RL  +  + E P +W +   A+ L +ER  L+  +  IK ++    + L
Sbjct: 6   GGIFDYDVKVERLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCDEIL 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+ELA++E D     E ++    ++ ++E  +F  + SG+ DS   YL++ +G+GGTE+
Sbjct: 66  MLVELAVDEQDQDTFDEAANETLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANMLLRMY RW E   +KTE +E+  G+ AGIK AT+   G  AYGWL+ E GVHRL
Sbjct: 126 QDWANMLLRMYLRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+ +RHTSF+S +VYP V+D+I+I I+ ++ RID YRASGAGGQHVNTT+SAV
Sbjct: 186 VRKSPFDSSGKRHTSFASAFVYPEVEDNIDIVINPAELRIDVYRASGAGGQHVNTTESAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT +VVQCQ +RSQHKNK QA   L+AKLYE E+Q +     I E +K++IGWG 
Sbjct: 246 RITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +P  VLDG+L++F++A+L 
Sbjct: 306 QIRSYVLDD-ARIKDLRTGVESRNPQRVLDGELNEFIEASLK 346


>gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 327

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325


>gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
 gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
          Length = 367

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 240/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS + + L G  D+++  QRL  +N   EDP +W +  +++ L +E++ L+  ++ +  +
Sbjct: 16  LSERNHALRGYLDFESKSQRLEEVNGLLEDPKIWDDNAKSQALGKEKRTLELVVNTLIHV 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  L D   L E+A EE+D   L     +   ++ E+   +F  + SGE DS + ++E  
Sbjct: 76  QGGLKDAQELFEMAREENDDDTLLSVEHDSLALEKEIAEMEFRRMFSGELDSANCFIEFQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANMLLRMY R+ E++ FK E LE  +G+ AGIK A++ + G  AYG L+
Sbjct: 136 SGSGGTEAQDWANMLLRMYLRYCERKGFKVEVLEESEGDVAGIKGASIKVSGDYAYGTLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S+ ++P VDDSIEI+I+ +D R+DTYRASGAGGQH
Sbjct: 196 TENGVHRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIEIDINPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPT  VVQCQ +RSQH+N+ +A NML+  LY LEL KR +     E +
Sbjct: 256 INKTDSAVRITHIPTNTVVQCQNDRSQHRNREEAMNMLKGALYNLELNKRNQEKQALEDA 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT+IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F+  +L 
Sbjct: 316 KTDIGWGHQIRSYVL-DQSRIKDLRTGVEIGNTQGVLDGDLDPFITESLK 364


>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
 gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
          Length = 330

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 230/325 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ + +E   L NA+   K++   + D  ++LE+A+EEDD S+  E  
Sbjct: 1   MSDPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D +Q+I+  VE ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  DYVQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAG KSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT 
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD FM+  L  +
Sbjct: 301 VETGNVQSVMDGNLDQFMEGFLKKE 325


>gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
          Length = 367

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++ + +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  + +I
Sbjct: 16  LAKRNDDIRVYMDYQGKKDRLEEVVGLSEDPDLWNDPKRAQDIGKERKLLEGVVLTLDKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + DN  L+++ +EE D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  TNGIDDNRELIDMVVEEGDADGFAAIIADVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMYTR+AE++ FK E +E  DGE AGI +ATL I+G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP VDDS E+EI+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQ Q  RSQH+N+     MLR+KL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT+ E  +   VLDGDLD F++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTSYEVGNTKAVLDGDLDGFIEASLK 364


>gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21]
 gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21]
          Length = 375

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 199/353 (56%), Positives = 262/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++RL  L+ + +DP LW +  +A+ + +E++ L+ AI+ ++E
Sbjct: 11  RIEAALALVRQSLDWERALRRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAINTVRE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + D +  +E+   E D  ++ E   +L  +    +  + ++LLSGEAD ND+Y+E+
Sbjct: 71  IESEMGDAMEFVEMGEAEGDDDVVNEGLTSLSTLADRADRDKVQALLSGEADGNDSYIEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IEI+ SD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEINPSDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKNKA A NML+A+L+E E+ +RE  A+    
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K++IGWG QIRSYVLQPYQMVKDLRT +   +P DVLDG LD F+ A LA +
Sbjct: 311 EKSDIGWGHQIRSYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALAQR 363


>gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272482|sp|Q03ZQ7|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 372

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 222/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +    G  D +   + ++    +  +P  W +  +A+ ++ E   L N       +
Sbjct: 13  MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSFLNL 72

Query: 63  QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +++ +  +L+E+A+E+ +D   L E    + + + +++    E LL+   D+N+A LE+
Sbjct: 73  TNQVEELELLIEMAVEDPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDANNAILEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTES DW   L RMYTRWA++  F+ E L+ H G+EAGI SAT+ + G NAYG+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+GVHR VRISP+DS  RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E        
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365


>gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 337

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 175/334 (52%), Positives = 238/334 (71%), Gaps = 1/334 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  +  + EDP +W +   A+ + +E+  L+N I+ +  +  +L D   +L+LA+E
Sbjct: 2   KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            DD S+L++    L   + E+   +F  + S   D N  Y+E+ +G+GGTE+QDWA+MLL
Sbjct: 62  ADDESLLEDVQSELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW E+  FK E +E+ DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS
Sbjct: 122 RMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR+THIPTG
Sbjct: 182 GNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ +RSQH N+  AW  LRA+LYELE+QKR E A   E SK++IGWG QIRSYVL 
Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLD 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +KDLRT +E ++   VLDGDLD F++A+L 
Sbjct: 302 DS-RIKDLRTGVENSNTGAVLDGDLDRFIEASLK 334


>gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
 gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
          Length = 376

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 227/353 (64%), Positives = 283/353 (80%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD +++RL +LN K EDP LW N  +A+ +MRERQ L+++I+ I+ 
Sbjct: 11  EIQQALQLLRRHLDWDQSLKRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIEL 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +L +++ L+ +  EE D  ++ +  + ++ +K E++ +Q + LLSGEADSND YLE+
Sbjct: 71  FTQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDILLSGEADSNDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA MLLRMY RW E+ K K E LEI+DGEEAGIKSAT+LIKG NAYG +
Sbjct: 131 HAGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMI 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I++++SESD RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDNIKVDVSESDVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE  N  E+
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+GDLD F++A LA +
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALAQR 363


>gi|71733798|ref|YP_276012.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 368

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 184/350 (52%), Positives = 248/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D+   RL+ +N + EDP++W N   A+ L RER  L   +  + E+
Sbjct: 17  LSERSETIRGYLDYDHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEM 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ 
Sbjct: 77  SSGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQ 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+
Sbjct: 137 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQH
Sbjct: 197 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +
Sbjct: 257 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDT 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L 
Sbjct: 317 KSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASLK 365


>gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 376

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 241/353 (68%), Positives = 296/353 (83%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  + +  L    DWD A++RL +LN K EDP+LW +  EA+ LMRERQ LD+ IS +K+
Sbjct: 11  ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +L DN+ L+EL  EE D  +++E  D L+ +K E   +Q E++LSGEAD ND YLEV
Sbjct: 71  LEQQLNDNIELIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL
Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E DCRIDTYR+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +
Sbjct: 251 HVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDG+L++FM+A LA +
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALAHR 363


>gi|303252568|ref|ZP_07338731.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247319|ref|ZP_07529367.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648536|gb|EFL78729.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856163|gb|EFM88318.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 347

 Score =  374 bits (961), Expect = e-102,   Method: Composition-based stats.
 Identities = 173/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I+ +   + D 
Sbjct: 3   FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE
Sbjct: 63  EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HR
Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+ +VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG
Sbjct: 243 VRITHIPSDIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 303 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345


>gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101]
          Length = 364

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/350 (44%), Positives = 229/350 (65%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G      +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 14  ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL +EE+D    +E    ++ +  E++  + E++LSGE D N+A L +
Sbjct: 74  LNERIDDVEVLKEL-MEENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+ GD+D+F+ A L
Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
 gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
          Length = 368

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 235/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +  ++   G LFD ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     
Sbjct: 11  NMIEEIKKWGFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     + 
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              E  WG QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 311 EHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1]
 gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas
           wittichii RW1]
          Length = 375

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 208/353 (58%), Positives = 267/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++ +  +    DWD A++RL  LN + EDP LW +   A+ +MRER+ LD A+S +K 
Sbjct: 11  QINQAMALVRRFLDWDRALRRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D + L+ELA  EDD +++ +    L  +    E  +  +LL+GEAD+N+ Y+EV
Sbjct: 71  IEQERDDTIELIELAEAEDDTALVDDGVQALAALAERAEKDKIGALLAGEADANNTYIEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA ML RMY RWAE+  +K E ++ H GE+AGIKSATLL++G NAYG+ 
Sbjct: 131 NSGAGGTESQDWAGMLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS +RRHTSF+S+WVYP VDD I+IE+ E D +IDTYR+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSAARRHTSFASVWVYPEVDDDIDIEVLEKDLKIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V CQ +RSQHKN+A+A   L+A+LYE ELQKRE  A  G +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQMVKDLRT    T+PSDVLDGDLD FM A L+ +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALSQR 363


>gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 371

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 230/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ ++L  +GG  D +    R+  L  KT  P  W +  EA+ +++E   L   +   + 
Sbjct: 12  EIKKRLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYES 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D   LLELA  E+D  + +E +  L R+       +   +  GE D ++A + +
Sbjct: 72  LVREIEDISALLELAEAEEDEELYREAAAELARLNRRFREYELSIMFKGEHDDSNAIVSL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++QDW  MLLRMYTRWAE   ++ + ++   GEEAGIKS TLLIKG  AYG +
Sbjct: 132 HAGAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYGKM 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRL+R+SP+D++ RRHTSF+ + V P + D +E+ IS  D RIDT+RA GAGGQ
Sbjct: 192 RAEAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+P+G+VVQCQ ERSQ+ NK  A  +LRAKLYEL+ +++EE     + 
Sbjct: 252 HVNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQKLKG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              EI WG QIR+YVL P+ +VKD RT +E  + + VLDGD++DF+ A L  K
Sbjct: 312 EYKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQK 364


>gi|317121051|ref|YP_004101054.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
 gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
          Length = 416

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 215/352 (61%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D     + +  +     DP  W     A+  +R+ + L   +   + +
Sbjct: 12  LRPRLEELRDDLDLAGKRREIERIEQAMTDPSFWDEPDRAQQQVRQLKVLKGPVEHYEAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +L D  +L ELA EE D S++ E  + + + +  +   + + LL+G  D  DA + +H
Sbjct: 72  ERQLDDLQVLAELAAEEADVSVIPELEEGIAKAEEGLRQLELDLLLNGPYDGYDAIVSLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA ML RMYTRWAE   ++ E L++ +GEEAGIKS T  ++GPNAYG+L+
Sbjct: 132 PGAGGTESQDWAQMLWRMYTRWAEDHGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+  RRHTSF+S+ V P + DS EIEI   D RID +RA G GGQH
Sbjct: 192 SEHGVHRLVRISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRI H+PTG+V  CQ ERSQH N+  A  +L+A+L     ++R +        
Sbjct: 252 VNKTESAVRIVHLPTGIVATCQNERSQHANRETAMKILKARLARYYEEQRLKEIAALRGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             EI WG QIRSYV QPY +VKD RT +E  +   V+DG LD F+ A L  +
Sbjct: 312 VGEIAWGNQIRSYVFQPYTLVKDHRTGVEVGNVQAVMDGHLDPFINAYLRWE 363


>gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1]
 gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
 gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides 2.4.1]
 gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
          Length = 375

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E   +++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822]
 gi|81579293|sp|Q7W8T4|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis]
          Length = 367

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 248/349 (71%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +   L    D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+ 
Sbjct: 17  AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D+  L+ELAL + D + L+    ++ R + ++E  +F  + +  AD  + ++++ A
Sbjct: 77  SGLADSCELVELALADSDDATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQA 136

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ 
Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+
Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SK
Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 317 TDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364


>gi|113969170|ref|YP_732963.1| peptide chain release factor 2 [Shewanella sp. MR-4]
 gi|114048688|ref|YP_739238.1| peptide chain release factor 2 [Shewanella sp. MR-7]
 gi|113883854|gb|ABI37906.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-4]
 gi|113890130|gb|ABI44181.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-7]
          Length = 352

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 172/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae]
          Length = 332

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  I  +   L D   LL+LA+E DD  
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDED 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L +++ ++   +F  + SG+ DS + YL++ AG+GGTE+QDWA+ML+RMY R
Sbjct: 62  TFHEAVAELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLMRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRH
Sbjct: 122 WAESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC
Sbjct: 182 TSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTGIVTQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA+  L+AKLYELE+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWGSQIRSYVLDDS-RI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 301 KDLRTGVENRNTQAVLDGDLDKFIEASLKA 330


>gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf.
           saccharolyticum K10]
          Length = 333

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+D S++ E  
Sbjct: 1   MEEPGFWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RW++K+ 
Sbjct: 61  GMMDDFVAKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWSDKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  +R TSF S 
Sbjct: 121 FTTSVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + + +++EI+  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A  ML+ KLY ++ ++  E  +       +I +G QIRSYV+QPY +VKD RT 
Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + VLDGD+D F+ A L  
Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324


>gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
 gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
          Length = 351

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 178/345 (51%), Positives = 239/345 (69%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +GGLFD +   + ++  N +  +P  W +  +A+ ++ E   L    +  K++     + 
Sbjct: 1   MGGLFDLETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEEL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            +LLE+  EE+D  +++E    +     +++  + E LLS   D N+A +E+H GAGGTE
Sbjct: 61  DLLLEMVKEENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDW N+LLRMYTRWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 121 SQDWGNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF SI V P +DDS++I+I+  D ++DTYRASGAGGQH+NTTDSA
Sbjct: 181 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKVDTYRASGAGGQHINTTDSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTGVVV  Q +RSQ KN+ QA +ML+AKL++LE+++ E+        + EIGWG
Sbjct: 241 VRITHMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAIRGEQLEIGWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV  PY MVKD RTN E  + S V+DG +D F++A L  K
Sbjct: 301 SQIRSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLRSK 345


>gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
          Length = 326

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/326 (49%), Positives = 215/326 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W N   ++ + ++   L + +     ++    D  ++LEL  EE+D  +  E  
Sbjct: 1   MTQEGFWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEEDPLLDDELK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  +   V   + E +LSG  D NDA L +HAGAGGTESQDW  MLLRM+TR+ E   
Sbjct: 61  SDLASLTKRVADMELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L++  G+EAG+KSAT+ + GPNAYG+LK E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 YKVEVLDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V PVVDD +E+ I   D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVLPVVDDEVEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+A A  +L+AKL +LEL+K+EE        + +I WG QIRSYV  PY +VKD RT 
Sbjct: 241 TYNRAAAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E  +   V+DG +D+F+ A L  K+
Sbjct: 301 VEVGNVYAVMDGAIDEFIAAYLKQKR 326


>gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9]
 gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9]
          Length = 332

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 178/330 (53%), Positives = 226/330 (68%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  + +++  L D   LLELA+E DD  
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEE 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML RMY R
Sbjct: 62  TFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRH
Sbjct: 122 WAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC
Sbjct: 182 TSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETRNTQAVLDGSLDQFIEASLKA 330


>gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
 gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
          Length = 339

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 168/332 (50%), Positives = 226/332 (68%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +     K   P  W +  +A+ L+ E   + +++   +++Q    D ++++ELA EE D 
Sbjct: 2   IENFEEKMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADEEGDD 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+  E  + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYT
Sbjct: 62  SLAGEIGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR
Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S  V P ++D +E++I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV 
Sbjct: 182 HTSFVSCDVVPEINDEVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ KN+ +A  MLR+KLYE +++++++        +++I WG QIRSYV  PY M
Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKD RT +E  +   V+DGDLD F+   L  +
Sbjct: 302 VKDHRTQVETGNIGAVMDGDLDGFIDGYLRSQ 333


>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
 gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
          Length = 330

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 232/325 (71%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A++EDD S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +++I+  +E ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT+
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD F++  L  +
Sbjct: 301 VETGNVQAVMDGNLDPFVEGFLKKE 325


>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
 gi|167665826|gb|EDS09956.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
          Length = 374

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/359 (43%), Positives = 226/359 (62%), Gaps = 7/359 (1%)

Query: 2   KLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +L  +L       D       +D   ++L+ L  +T  P  W +V  ++    E   +  
Sbjct: 6   ELRLRLEAHRAELDEFAQAIGYDALRRKLAELEEQTTAPGFWNDVERSQKNQLETARVRG 65

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +    ++     D L L+ LA EE+D S+  E   +++R + ++E ++  +LL+GE D+
Sbjct: 66  KLEACDKLNALYDDTLTLIGLADEENDESVYSEALADVERFESDLETQKLSTLLTGEYDA 125

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+A +  HAGAGGTE+QDWA ML RMYTRWAE+  F  + L+  DG+EAG+KSA++LI G
Sbjct: 126 NNAIMTFHAGAGGTEAQDWAQMLYRMYTRWAERHGFTYKILDYLDGDEAGLKSASILITG 185

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            NAYG+L+ E GVHRLVR+SP+D++ RRHTSF+S+ V P + D   +EI+  D ++D +R
Sbjct: 186 DNAYGFLRSEAGVHRLVRVSPFDASGRRHTSFASVEVLPELPDDHSVEINPEDIKMDVFR 245

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQH+N T SAVR+THIPTG+VV CQ ERSQ +N+     ML AKL E++ ++   
Sbjct: 246 SSGAGGQHINKTSSAVRLTHIPTGIVVSCQNERSQFQNREMCMKMLTAKLVEIKEREHLA 305

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             N  +  + +I WG QIRSYV  PY + KD RT  E  + + V+DGDLD F+ A L  
Sbjct: 306 NINEIKGEQMQIAWGSQIRSYVFMPYTLAKDHRTGFESGNINAVMDGDLDGFINAYLKA 364


>gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
 gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
          Length = 374

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 196/352 (55%), Positives = 250/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S+ L  L    + + A  RL   N + EDP+LW +   A+ LMRERQ L ++I+  + 
Sbjct: 11  QISKSLELLAQRLNVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D++ L+E+   E+D  ++ E    L+ +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKQELADHVELIEMGEMENDAEVVAEAEAALKALAETAAQKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWANILARMYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361


>gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
 gi|81578745|sp|Q7VZ35|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81580061|sp|Q7WK44|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
          Length = 367

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 247/349 (70%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +   L    D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+ 
Sbjct: 17  AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D+  L+ELAL + D + L+    +  R + ++E  +F  + +  AD  + ++++ A
Sbjct: 77  SGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQA 136

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ 
Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+
Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SK
Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 317 TDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364


>gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13]
          Length = 326

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 172/325 (52%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A++++ E   L   +    E+ +   +  +  EL  EE D  +  E  
Sbjct: 1   MSNPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKEEPDAELQAELG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  +    + + LLSGE D N+A LE+H GAGGTESQDW ++LLRMYTRWAE++ 
Sbjct: 61  SEVKTVAEDFNKFELQLLLSGEHDKNNAILELHPGAGGTESQDWGSLLLRMYTRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  DD+IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFDDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+ +L +++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 TEVGNTQAVMDGDLDPFIDAYLRSK 325


>gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029]
 gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 375

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E   +++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETAGAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
 gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
          Length = 378

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 165/354 (46%), Positives = 229/354 (64%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  L  +  + D D   ++++ L  +   P LW +  +A+ +     HL   ++ I+E
Sbjct: 12  ELTGTLRGIQDVLDIDGLRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D  +L ELA EE D   L E    L ++K ++   +  +LLSGE D  +A + +
Sbjct: 72  LARRLEDLPVLFELAAEEGDQEALAEAERELAKLKSDIGALEVRTLLSGEYDEREALITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DWA MLLRMY RWAE++ + TE  +    EEAGIKS T  +K P AYG L
Sbjct: 132 NAQAGGVDAADWAQMLLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVRISP+D+ +RR TSF+ + V PVV+ + +IEI+E + RID YR+SG GGQ
Sbjct: 192 KGEHGTHRLVRISPFDNQARRQTSFAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A  +L+AKL E +  + E  A     
Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMAVLKAKLLERKR-QEEAQAMAELR 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +T   WG QIR+YVL PYQ+VKDLRT +E  +P+ VLDGDLD F++A +   +
Sbjct: 311 GETTTSWGTQIRNYVLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEIRWLR 364


>gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
 gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
          Length = 368

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 165/353 (46%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +  ++  +G   D ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     
Sbjct: 11  NMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     + 
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              E  WG QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 311 EHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 349

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/345 (50%), Positives = 230/345 (66%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +  ++++ L T +  P  WQN   A+ +++E +     IS  K++ +   D L
Sbjct: 4   GDLFDVTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYEDVL 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+++ +EE D  +  E   +        +  +  +LL GE D NDA + +HAGAGGTE+
Sbjct: 64  VLIDMGIEEHDADMCAEAISDANSFIEFYDNLRTSTLLDGEYDKNDAIISLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW NMLLRMYTRWAEK  FK++ L+I DGEEAG+KSATL I G NAYG+LK E+G+HRL
Sbjct: 124 CDWNNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLKSEKGIHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF+S+ V P +DD+ EI I+  D +IDTYR+SGAGGQHVNTTDSAV
Sbjct: 184 VRISPFDSGGRRHTSFASLDVMPKIDDTAEITINPEDLQIDTYRSSGAGGQHVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+G+VVQCQ ERSQ +N+     ML +KL   + Q++    +     K +I WG 
Sbjct: 244 RITHKPSGIVVQCQNERSQIQNRETCMKMLASKLLYKQHQEQLLKIDEIRGEKKDIAWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYV  PY MVKD RTN E  +   V+DGD+D F+ A LA  K
Sbjct: 304 QIRSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLAWLK 348


>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 330

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 227/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L N++   K++   + D  ++L++A+EE+D S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  I+  VE ++   LL GE D N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  QFVNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAGIKSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSVELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY MVKD RT+
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F++  L  +
Sbjct: 301 VETGNVQAVMDGNIDQFIEGYLKKE 325


>gi|229827336|ref|ZP_04453405.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
 gi|229788274|gb|EEP24388.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
          Length = 340

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 169/333 (50%), Positives = 219/333 (65%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  LN    +P  W N  +A   M E   L N I    E+Q    D   L+E+A EE+D
Sbjct: 2   RLEELNRLISEPGFWDNADKANATMAEISSLKNGIESFDELQTMYDDIGALIEMAEEEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            S++ E  D L+R K E +  +  +LLSG  D ++A + +HAGAGGTE+ DW  +L+R Y
Sbjct: 62  SSMVSEIGDELERFKTEFDTLRISTLLSGPYDKDNAIITLHAGAGGTEACDWTGILMRAY 121

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TRWA+ + FKTE ++   GEEAG+KS T+ I G NAYG+LK E GVHRLVRISP+++  +
Sbjct: 122 TRWADSKGFKTEVIDYLAGEEAGVKSCTIEITGTNAYGYLKSEHGVHRLVRISPFNAAGK 181

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF S  V P +++ I+IEI + D RIDT+RASGAGGQH+N T SA+RITH P+G+VV
Sbjct: 182 RQTSFVSCDVMPDIEEDIDIEIKDEDMRIDTFRASGAGGQHINKTSSAIRITHFPSGIVV 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ +NKA+A  ML+AKLY L  Q+ E         + +I WG QIRSYVLQPY 
Sbjct: 242 SCQNERSQFQNKAKAMQMLKAKLYMLRQQENEAKEAGIRGEQKDIAWGSQIRSYVLQPYT 301

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           MVKD RTN+E  +   VLDG+ D F+ A L  K
Sbjct: 302 MVKDHRTNVEIGNAQTVLDGNFDPFINAYLKWK 334


>gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 374

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 242/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  ++ + E P +W +   A+ L RER  L+  +  I ++
Sbjct: 14  LNDRVLSLRGYLDYDVKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA  E D         +L + +  VE  +F+ + SG+ D  +A++++ 
Sbjct: 74  LAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQMDGANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ I+G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNVERDALEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
 gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
          Length = 331

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ E   + +++   +++Q    D ++++ELA EE D S+  E  
Sbjct: 1   MAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEKR 
Sbjct: 61  ETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D +EI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERSQ
Sbjct: 181 DVVPEITDDVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  MLR+KLYE +++++++        +++I WG QIRSYV  PY MVKD RT 
Sbjct: 241 IKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTQ 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F+   L  +
Sbjct: 301 VETGNVGAVMDGDLDGFIDGYLRSQ 325


>gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225944|sp|Q9ZDQ2|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii]
          Length = 369

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 178/352 (50%), Positives = 246/352 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ +    D +    RL+ L   T DP+LW N   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L + L L  +A  E+D   L +   + +++ +     + E L SGE D N+ +LE+
Sbjct: 71  LKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S W+YP +DD I I I + D RIDT+R+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR E  +   +
Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQ+VKDLRTN E +    VLDG+L+DF+ A+L++
Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSM 362


>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
          Length = 344

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 167/343 (48%), Positives = 239/343 (69%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD DN  +RL+ +       + W+N  +A  L++ER  +   +   K +   L +  IL
Sbjct: 1   MFDLDNKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEIL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             LA+EE D   ++E S  +Q++K ++       +L GE D N+A + ++AGAGGTE+QD
Sbjct: 61  YSLAIEESDSKTIEEVSVQIQKLKEKINKLSLLLMLDGEDDINNAIVSINAGAGGTEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W+ +L RMY+RW EK+ FK+  ++   G+EAGIKS T+ ++G  AYG+LK E GVHRLVR
Sbjct: 121 WSEILFRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +RHTSF+S++VYP +D+SIEI+I E D RID +R+SGAGGQHVN T SA+RI
Sbjct: 181 ISPFNANGKRHTSFASVFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VVQCQQERSQHKNK  A ++L+++LY+LE QK+++        K EI WG QI
Sbjct: 241 THLPTGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWGNQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RSYVL PYQ++KD R N+E  + + VLDG +D F++  L  +K
Sbjct: 301 RSYVLHPYQLIKDHRINLETGNAAAVLDGAIDPFIEGVLLSRK 343


>gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 337

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +  E+  ++RE + L + +    +++    D  +L+E+  EE+D S++ E  
Sbjct: 1   MEEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEENDESLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+    E++  +  +LL+GE D   A ++++AGAGGTES DW +ML RMYTRWA K  
Sbjct: 61  AMLEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  + L+I DG+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTVDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P +++ ++++I+  D RIDTYR+SGAGGQH+N T SA+RITHIPTGVVVQCQ ERSQ
Sbjct: 181 DIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKL+ L+ Q   E  +       +IGWG QIRSYV+QPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + S V+DGD+D F+ A L  +
Sbjct: 301 AESGNVSAVMDGDIDKFIIAYLTWQ 325


>gi|157373979|ref|YP_001472579.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
 gi|157316353|gb|ABV35451.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
          Length = 352

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 173/342 (50%), Positives = 232/342 (67%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +  + E   +W N   A+ L +ER  L+  +  I ++   L D  
Sbjct: 9   GGIFDYDAKKERLEEVCAELESAEVWSNPENAQALGKERSSLEVIVKTIDDMDSGLEDVQ 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+ELA+EEDD     + S  L  ++  +E  +F  + SG  D  D YL++ +G+GGTE+
Sbjct: 69  DLVELAVEEDDEETFDDASTELDGLEKRLEELEFRRMFSGPHDVADCYLDIQSGSGGTEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANM+LRM+ RW +   +K E +E+ DG+ AGIK AT+   G  A+G L+ E GVHRL
Sbjct: 129 QDWANMVLRMFLRWGDAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+
Sbjct: 189 VRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E SK++IGWG 
Sbjct: 249 RITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDSKSDIGWGS 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 309 QIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 349


>gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
 gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
          Length = 359

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/343 (50%), Positives = 244/343 (71%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W +   A+ L RE++ L+  +  + +I + L D 
Sbjct: 15  FGGIFDYDAKAERLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDA 74

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L +LA E+DD + L     +   I   +E  +F  + S  AD  + ++++ AGAGGTE
Sbjct: 75  QELFDLAAEDDDDATLAAVEADTNAIGARLEELEFRRMFSNPADPLNCFMDIQAGAGGTE 134

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA++LLR Y R+ E + FKTE LE  DG+ AGIKSAT+ I+G  A+G L+ E GVHR
Sbjct: 135 AQDWASILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHR 194

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS + RHTSF+S++VYP VD+S+EI+I+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 195 LVRKSPFDSANGRHTSFASVFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSA 254

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYELE++ R       E SKT++GWG
Sbjct: 255 VRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWG 314

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 315 HQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 356


>gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601]
 gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Roseovarius sp. HTCC2601]
          Length = 373

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 192/353 (54%), Positives = 244/353 (69%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ LG   DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+     
Sbjct: 11  KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ E    L+ +  +   K+ E+LL GEAD ND +LE+
Sbjct: 71  IKQELSDNVELIELGEMEEDDEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA ML RMY RWAEKR ++ E      G EAGIKS    I G NAYGWL
Sbjct: 131 NAGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+     R TSF+S+WVYPVVDD+IEI+++ SD R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIEIDVNPSDIRVDTYRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 250 HVNTTDSAVRITHMPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQHE 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA K
Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQK 361


>gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42]
 gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42]
          Length = 327

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ ++ E   L   ++   ++ +   +  +  +L  EE D  + QE  
Sbjct: 1   MAEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKEEPDQDLQQELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325


>gi|299821880|ref|ZP_07053768.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
 gi|299817545|gb|EFI84781.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
          Length = 338

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 167/336 (49%), Positives = 228/336 (67%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP  W +   A+ ++ E   L +      +++++  +  + LEL  E
Sbjct: 1   MEARIAELEDQMLDPSFWNDQQGAQTVINEANGLKDTYQAFHQLEEQQENLEVSLELLRE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + ++  + LQ    E++  + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  ELDADLKEQVEEELQTFVRELKDFELKMILSEPYDKNNAILEIHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+A+K+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+G+HRLVRISP+DS
Sbjct: 121 RMYQRFADKKGFKVEMLDYQAGDEAGIKSVTLLIKGLNAYGYLKAEKGIHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P ++D IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+TH+PTG
Sbjct: 181 SGRRHTSFVSVDVMPELNDDIEIEVRPEDLKIDTYRATGAGGQHINTTDSAVRMTHLPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E+        + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKEQELAAIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT +E  +   V+DG++DDF+ A L  K
Sbjct: 301 PYSMVKDHRTEVETGNTQAVMDGEIDDFINAYLRSK 336


>gi|325291337|ref|YP_004267518.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 371

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 162/351 (46%), Positives = 228/351 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  +L  L    D      ++  L  +   P  W +   A+ +M+E     + ++   E
Sbjct: 11  NLVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQELTGNKDKVALFGE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  +L ++A+EEDD S+  E   ++ RI+ + +  + E LLSGE D N+A + +
Sbjct: 71  LKTETEDLEVLWQMAMEEDDSSLEDEIVKDIHRIRAQYDELELEILLSGEYDRNNAIITL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTE+QDW  ML RMY RW E+R++K E L++  GEEAGIKS T  + G NA+G+ 
Sbjct: 131 HSGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKSVTFSLAGENAFGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF+S+ V P V++ +EI I   D ++DTYR+ GAGGQ
Sbjct: 191 KCEKGVHRLVRISPFDSSGRRHTSFASVDVIPEVNEDMEINIDSEDLKVDTYRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIP+G++VQCQ ERSQ +N+A    +L+AKL EL+ +++EE       
Sbjct: 251 HVNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLELKRKQQEEELLEIRG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +I WG QIRSYV  PY MVKD RTN E  + + V+DG++D F+ A L 
Sbjct: 311 ELNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLFISAYLK 361


>gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
 gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
          Length = 337

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/334 (52%), Positives = 235/334 (70%), Gaps = 1/334 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  +  + EDP +W +   A+ + +E+  L+N ++ +  + ++L D   +L+LA+E
Sbjct: 2   KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            DD S+L +    L   + E+   +F  + S   D N  Y+E+ AG+GGTE+QDWA+MLL
Sbjct: 62  ADDESLLVDVESELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW E+  FK E +E  DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS
Sbjct: 122 RMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            +RRHTSFS+++V P +DD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+TH PTG
Sbjct: 182 GNRRHTSFSAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IGWG QIRSYVL 
Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLD 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +KDLRT +E ++   VLDGDLD F++A+L 
Sbjct: 302 DS-RIKDLRTGVENSNTGAVLDGDLDKFIEASLK 334


>gi|170017955|ref|YP_001728874.1| peptide chain release factor 2 [Leuconostoc citreum KM20]
 gi|238688939|sp|B1MW26|RF2_LEUCK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169804812|gb|ACA83430.1| Peptide chain release factor 2 [Leuconostoc citreum KM20]
          Length = 372

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 220/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +    G  D +   + ++    +  +P  W +  +A+ ++ E   L N       +
Sbjct: 13  IQENIARFQGTLDLEALTEEIADFENRMTEPGFWDDNTKAQKVIEENNVLKNRRDSFLNL 72

Query: 63  QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++  +  +L+++  E+  D     E +D++ + + +VE    E LL+   D+N+A LEV
Sbjct: 73  TNQAEEIEVLIDMLAEDPGDVDTATELADSIAQAQKDVEAYNLEQLLTEPYDANNAILEV 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTES DW   L RMYTRWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+GVHR VRISP+DS  RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E        
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMKLLKSKLYQLELEKQEAERAALTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 372

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +    G  D +   + ++    +  +P  W +  +AK ++ E   L N       +
Sbjct: 13  MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSFLNL 72

Query: 63  QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +++ +  +L+E+A+E+ +D   L E    +   + +++    E LL+   D+N+A LE+
Sbjct: 73  TNQVEELELLIEMAVEDPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDANNAILEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTES DW   L RMYTRWA++  F+ E L+ H G+EAGI SAT+ + G NAYG+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+GVHR VRISP+DS  RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E        
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365


>gi|115311854|sp|Q4L4H9|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 371

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 163/352 (46%), Positives = 227/352 (64%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +    L  + G  D++N    +        +P  W +  +A+ ++ +   L + ++   E
Sbjct: 12  EYRNNLAQIRGSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++ + D     EL  EE D  +  +   N+   K +V+  + + LL G  D+N+A LE+
Sbjct: 72  LEEEVEDMTATWELLQEELDGDVKSDLEQNVLDFKEKVDQFELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY R+ E++ FK E ++   G+EAG+KS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML+AKLY+L+L+++E       
Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             + EIGWG QIRSYV  PY MVKD RTN E      V+DG++  F+++ L 
Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYLR 363


>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
 gi|7388057|sp|Q9X1R5|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
          Length = 369

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/350 (46%), Positives = 233/350 (66%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + D   + L  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 14  ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL+  ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 74  VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 132 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 192 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++K+       + 
Sbjct: 252 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSY+  PY MVKD RT +E  +   V+DGD+D F++A L
Sbjct: 312 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 361


>gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
 gi|71153101|sp|Q8CPZ1|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153102|sp|Q5HQX5|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
          Length = 371

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 228/354 (64%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +    LN + G  D +N    +        DP  W +  +A+ ++ +   L + ++   +
Sbjct: 12  EYQNHLNQIRGSLDLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + + + D     EL  EE D  +  E  + +Q+ + +++  + + LL G  D+N+A LE+
Sbjct: 72  LTNAVDDMSATRELLQEEYDEDMKIELEEEVQQFEEQIDQYELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMY R+ E+  FK E ++   G+EAG+KS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML++KLY+L+L+++E+      
Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + +IGWG QIRSYV  PY M+KD RTN E      V+DG++  F++A L  +
Sbjct: 312 GEQKDIGWGSQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYLRKE 365


>gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
 gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
          Length = 372

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +++ L    D D+  + L  L+ +   P  W +   ++ ++++R  ++  +     +
Sbjct: 12  LTSRISSLRRSLDLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D  +++EL  E  D   L E     +R+K  VE  +F+ +LSG  D N  ++ V+
Sbjct: 72  NRQADDVRVMIELGEESSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDRNGCFVSVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWANMLLRM  R+ EK+ +K    +  DGEEAG+KSAT  + G  AYG LK
Sbjct: 132 SGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVR+SP+DSN+RRHTSF+S++V+P + ++ I+I I++SD R+DTYR+SG+GGQ
Sbjct: 192 AEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT +VV CQ ERSQ  N+A A  +LRAKLYE E+++R   A+    
Sbjct: 252 HVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+   L 
Sbjct: 312 EKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFVIPFLM 362


>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
 gi|238688848|sp|B1LB88|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
          Length = 367

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/350 (46%), Positives = 233/350 (66%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + D   + L  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 12  ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL+  ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 72  VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++K+       + 
Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSY+  PY MVKD RT +E  +   V+DGD+D F++A L
Sbjct: 310 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359


>gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
 gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
          Length = 374

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 190/352 (53%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    +W+ A  RL   N + EDP+LW +  +A+ LM++RQ L ++I+    I
Sbjct: 12  IEKSLELLRQRMNWETAQHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN  L+EL   EDD  ++ E    L+ +K     K+ E+LL+GEADSND +LE++
Sbjct: 72  RQELSDNAELIELGEMEDDQEVVAEAETALRALKERAAEKELEALLNGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAEKR +K E      G EAGIKS    I G NAYGWLK
Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+     R TSF+S+WVYPVVDD+I+I+++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIDIDVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHEN 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K   GWG QIRSYVLQPYQMVKDLRT  E +    VLDG+LD FM ATLA+ 
Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLAMD 361


>gi|117921735|ref|YP_870927.1| peptide chain release factor 2 [Shewanella sp. ANA-3]
 gi|117614067|gb|ABK49521.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           ANA-3]
          Length = 352

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 173/343 (50%), Positives = 234/343 (68%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG+ D++D YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 342

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/326 (50%), Positives = 225/326 (69%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   + + +  ++ ++  L D  + L+LA EEDD  +  E +
Sbjct: 1   MAAPDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEAN 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +++K E++  + + +LSGE D N+A LE+H GAGGTESQDWA+MLLRMYTRWAE   
Sbjct: 61  RLAEQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S+
Sbjct: 121 YKVEVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASV 180

Query: 210 WVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P + +  + IEI   + RIDTYR++GAGGQHVNTTDSAVRITHIPTG+VV CQ ERS
Sbjct: 181 DVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+A+A  +L+++L     ++RE+        + EI WG QIRSYV  PY +VKD RT
Sbjct: 241 QIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E ++   V+DG++D F+ A L  +
Sbjct: 301 NYETSNTQAVMDGEIDPFIHAYLRWQ 326


>gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
 gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
          Length = 378

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 228/352 (64%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  + G  D  +    +S     + +   W+N  +A+ +M + + L N I   +++
Sbjct: 12  LKEDILNVWGRLDVPSIEAAISEKEALSGESGFWENPAKAEKVMTDIKQLKNRIEPWRDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L EL +E  D S+  E      + + E +     +LLSGE D N A+L +H
Sbjct: 72  IAAVDDAEALYELGMESGDESLEAELKAAYDQAQAEYDRLSILNLLSGEVDRNGAFLTIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAE+R FK E +++ + E  GIKS TL I G  AYG+LK
Sbjct: 132 AGAGGTEACDWAQMLCRMYVRWAERRGFKVETVDMLEAE-GGIKSVTLQISGEYAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN+RRHTSFSS++V+PV+DD+IE++I   D R+DTYRA GAGGQH
Sbjct: 191 SEAGIHRLVRISPFDSNARRHTSFSSVYVFPVLDDTIEVDIRPEDLRVDTYRAGGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVR TH+PTG+VV CQ ERSQ  N+A A +MLRA+LYE   +++E+      S 
Sbjct: 251 VNKTDSAVRFTHLPTGIVVACQTERSQTMNRATAMSMLRARLYEYYREQKEKENAKFASE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIRSYV QPY MVKD RT  E  +   V+DG +D F++A LA +
Sbjct: 311 KKDISWGNQIRSYVFQPYTMVKDHRTKHEIGNIQSVMDGAIDPFIEAFLAAQ 362


>gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
 gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
          Length = 370

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 195/352 (55%), Positives = 255/352 (72%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + +  L    DWD + +RL  LN  +EDP  W +   A+ LMRER  +  A+  I  
Sbjct: 11  KIQQSIELLRRRLDWDVSSKRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAMDDITA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   + E+A  E D S+L++  ++++   +  E  +  +LLSGE D ND ++E+
Sbjct: 71  LETEISDAEEMAEMAEMEGDDSLLEDIVESMKAALIRAERAELSALLSGEVDGNDCFVEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTESQDWANML RMY RWA     K E L+ HDGEEAGIKSATL + G NAYGWL
Sbjct: 131 NAGAGGTESQDWANMLRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGENAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN++RHTSFSS+ V PV+DD+IE+EI + D R DTYRASG+GGQ
Sbjct: 191 KSESGVHRLVRISPFDSNAKRHTSFSSVAVSPVLDDTIEVEIEDKDVRTDTYRASGSGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSA+R+TH PTG+VV CQ +RSQHKN+A AWNMLRA++YEL++++R E A     
Sbjct: 251 HINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEAAQANAD 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+IGWG QIRSYVLQPYQM+KDLRT +E +    VLDGDLD F+ A+L+ 
Sbjct: 311 AKTDIGWGHQIRSYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLSA 362


>gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
 gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
          Length = 374

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 196/352 (55%), Positives = 252/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ L +A+   K 
Sbjct: 11  EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ +  + L+ ++ +   K+ E+LL GEADSND +LE+
Sbjct: 71  IKQDLADNIELIELGEMEEDEEVVADAEEALKALQQKAAEKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHNPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S  + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 310 SAGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
 gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
          Length = 365

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 220/351 (62%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S ++N      + +     +   + + +    W +  +A+ ++     + + ++    
Sbjct: 12  KMSERINQFKDSLNVEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANAIKDKVNTFYS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + +  +  EL LEE D  +  E    ++ +   +   + E LLSG  D+N+A LE+
Sbjct: 72  LEGEVEELAVAFELILEEPDADLQAELESQIEEVSEHLNKFELEILLSGPYDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA ML RMYTR+AE++ FK E L+   GEEAGIKS T+ IKG NA+G+ 
Sbjct: 132 HPGAGGTESQDWAEMLYRMYTRYAERKGFKIEVLDYLVGEEAGIKSVTIKIKGTNAFGYF 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS  RRHTSF S  V P     I+IEI   D +IDTYRASGAGGQ
Sbjct: 192 KAERGVHRLVRISPFDSGGRRHTSFCSCDVMPEFSGDIDIEIRAEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+NTTDSAVRITHIPT  +V CQ +RSQ KN+  A  ML++KLY+ +L+++E        
Sbjct: 252 HINTTDSAVRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRKLEEQEAELAKIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              EIGWG QIRSYV  PY +VKD RT+ E  +   V+DGDLD F+ A L 
Sbjct: 312 EVKEIGWGSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFIDAYLR 362


>gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)]
          Length = 325

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/324 (52%), Positives = 225/324 (69%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P LW +   A  + +E+  LD  I+ I  ++  L D   +LELA+E DD  +L +  
Sbjct: 1   MESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEADDEGLLSDVQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   + +VE  +F+ + +GE D N+ ++++ +G+GGTE+QDWA MLLRMYTRW E   
Sbjct: 61  QELNAAQAQVEDLEFKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK +  E+  G  AG+KSA+  + G  A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++
Sbjct: 121 FKVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V P +DD I+I+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH PT  VVQCQ ERSQ
Sbjct: 181 FVSPEIDDDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NKA A  MLRAKLYELE+QKR E     E +K+++GWG QIRSYVL     +KDLRT 
Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWGSQIRSYVLDDS-RIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323


>gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 333

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 172/325 (52%), Positives = 227/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W NV E++ +M+E + L   +    +++ +  D   L+++A E++D  +++E +
Sbjct: 1   MEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEEDEDADLIEEAT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   +   E  +  +LL+GE D +DA L +HAGAGGTES DWA ML RM+TRWA K+ 
Sbjct: 61  ALMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + TE L+  DG+EAGIKS T+ I G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S 
Sbjct: 121 YGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D IE+EI++ D RIDTYRASGAGGQH+N TDSA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK QA  ML+ KLY L+ Q+  E  +       + GWG QIRSYVLQPY MVKD RTN
Sbjct: 241 HKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDVGDNGWGNQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +PS VLDGDLD FM A LA  
Sbjct: 301 FESGNPSAVLDGDLDGFMNAYLAWD 325


>gi|77918851|ref|YP_356666.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
 gi|77544934|gb|ABA88496.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           carbinolicus DSM 2380]
          Length = 326

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 175/326 (53%), Positives = 233/326 (71%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W++  +A+ +++ER  L+  ++  +E Q  L D  +L +L  E  D + L+E S
Sbjct: 1   MSRPGFWESGDQAQDILKERTGLEKLVTSFRESQQELEDLQLLADLGAESGDEATLEEIS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++  V+  +F  +LSGE DS DA   ++AGAGGTE+QDWA+MLLRMY R+ EK+ 
Sbjct: 61  ALLPDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRMYMRYFEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIK ATL + G  AYGWL+ E G+HRLVRISP+DSN+RRHTSF S+
Sbjct: 121 FKAELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNARRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V+P + D +E++I+E D ++DTYR+SGAGGQHVN TDSA+RITH+P+G+VV CQ ERSQ
Sbjct: 181 FVFPELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGIVVACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN+A A   L+A+LYELEL+K+EE A+     K EIGWG QIRSYVL PY+MVKD RTN
Sbjct: 241 HKNRATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWGSQIRSYVLHPYRMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   VLDGDLD F++A L   K
Sbjct: 301 FESGNADAVLDGDLDGFIEAYLLSAK 326


>gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
 gi|167652486|gb|EDR96615.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 367

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 179/350 (51%), Positives = 236/350 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  L G    +   +R+  L    E P  W+++ E++ ++RE + L + +   + ++
Sbjct: 15  REPLEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQVEGYEGLK 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D   L+E+A EE+D  +  ET +     +   E  +  +LLSGE D N+A L +HA
Sbjct: 75  GQFEDIETLIEMASEEEDEELAAETQEAFAEFETAYENLRISTLLSGEYDKNNAILSLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA ML RMYTRWA K+ F+T+ ++  DG+EAGIKS T+ IKG NAYG+L+ 
Sbjct: 135 GAGGTESCDWAGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKSVTVEIKGENAYGYLRS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF+S  V P +D+ + +EI++ D RIDTYRASGAGGQH+
Sbjct: 195 ERGVHRLVRISPFNAAGKRQTSFASCDVMPEIDEDLNVEIADEDIRIDTYRASGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITHIPTG+VVQCQ ERSQHKNK QA  ML+ KLY L+ Q+  E  +      
Sbjct: 255 NKTDSAIRITHIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            + GWG QIRSYVLQPY MVKD RTN E  +PS VLDGDLD FM A LA 
Sbjct: 315 GDNGWGSQIRSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGFMNAYLAW 364


>gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
 gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
          Length = 375

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 199/351 (56%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + L  L    D + A  RL   N   E   LW +   A+ LMRERQ L + +   + I 
Sbjct: 13  RKTLRLLAQRMDLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRRID 72

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L DN+ L+EL   EDD  I+ E   +L+ +K     K+ E+LL GEAD ND +LE++A
Sbjct: 73  RDLTDNIELIELGEMEDDPEIVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEINA 132

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA+ML RMYTRWAEK+ +  E      G+EAGI+S    I G NAYGWLK 
Sbjct: 133 GAGGTESCDWASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWLKS 192

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR VRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I  SD RIDTYR+SGAGGQHV
Sbjct: 193 ESGVHRQVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPASDIRIDTYRSSGAGGQHV 252

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PT +VV     +SQH+N+  A N LRA+LY++EL KR    N    +K
Sbjct: 253 NTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALRARLYQMELDKRNAAINAQHEAK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            E GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+ 
Sbjct: 312 GEAGWGNQIRSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLAMD 362


>gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
 gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
          Length = 347

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 175/344 (50%), Positives = 229/344 (66%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           C GG+FD+     RL+ +  +  +P +W     A+ L +ER  L+  +  I ++     D
Sbjct: 2   CSGGIFDYAEKKDRLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  LLE+A+ EDD       + +   +  ++E  +F  + SGE D N+AYL+V +G+GGT
Sbjct: 62  SHDLLEMAVAEDDIDTADMVASDTSDLIAQLEKLEFRRMFSGEMDPNNAYLDVQSGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW  MLLRMY RW E + FK   +E   GE AG+KSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWTEMLLRMYLRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+SI+V P +DD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDS
Sbjct: 182 RLVRKSPFDSGGRRHTSFASIFVSPEIDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH PT  VV CQ ERSQH+NK  A   LRAKLYELE+ KR       E SK +IGW
Sbjct: 242 AVRITHEPTNTVVSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GSQIRSYVLDD-ARIKDLRTQVETRNTQAVLDGDLDKFIEASLK 344


>gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|122940216|sp|Q02ZM8|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 365

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 221/350 (63%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++N      D D   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  NMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  +   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+TH+PTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG++D F+ A L  
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363


>gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4]
 gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4]
          Length = 377

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 165/352 (46%), Positives = 236/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  L    D     +RL+ L  + E P  W+++  A+ + +E   L   +     +
Sbjct: 12  LAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   +  +LLELA EE D  +L E + +++++  E+E  + E LLSG  D+++A + +H
Sbjct: 72  REGHEELSVLLELAAEEGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYDASNAIVSLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDW  MLLRMY RWAE   ++   L++  GEEAGIKS T  + GP AYG+LK
Sbjct: 132 AGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRL+RISP+D++ RRHTSF+S+ V P V D  EI+I+  + RIDT+RASGAGGQH
Sbjct: 192 AERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDDTEIKIAPEELRIDTFRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T++AVRITH+PTG+ V CQ ERSQ  NKA A  +LRA+L +L++++RE+        
Sbjct: 252 VNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALRGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             EI WG QIR+YVL PY +VKD RT +E+     VLDGD+DDF++A L ++
Sbjct: 312 VKEIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVE 363


>gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4]
 gi|123517990|sp|Q2MGI2|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus pneumoniae TIGR4]
          Length = 364

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 217/351 (61%), Gaps = 2/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L    G  D +   + ++ L  K  +P  W + I A+   +E   L N  +   +++
Sbjct: 14  REKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKME 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +   +  ILL+   E  D S+  E    L  +   +   +   LLS   D N+A LE+H 
Sbjct: 74  ELQDEVEILLDFLAE--DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHP 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK 
Sbjct: 132 GSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKS 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V
Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY++E  K+    +  +  K
Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EI WG QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L  +
Sbjct: 312 KEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040]
 gi|122984362|sp|Q1GIB5|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp.
           TM1040]
          Length = 374

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 191/352 (54%), Positives = 244/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    +W+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+   K I
Sbjct: 12  IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D++ L+EL   E+D  ++++  D L+ +K +   K+ E+LL GE D NDA+LE+ 
Sbjct: 72  RQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLEIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+ML RMY RWAE R F  E  E   G EAGIKSAT  IKG NAYGWLK
Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+     R TSF+++  YPV+DD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGTHRLVRISPFG-KGTRETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYV+QPYQMVKDLRTN E      VLDGDLD FM ATLA+K
Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361


>gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
 gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
          Length = 327

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ +++E   +   ++  + I++ L +  +  EL  EE+D  +  +  
Sbjct: 1   MADPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKEENDQELFADLD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             LQ+   +V   + + LLS   D+N+A LE+H GAGGTESQDWA+MLLRMY RWAE+R 
Sbjct: 61  AELQQFITDVNQFELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWAEERN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D ++I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT ++V CQ ERSQ
Sbjct: 181 DVTPEMSDDVDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML++KLY+LE++K+ +  +     + EIGWG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNREAAMKMLKSKLYQLEVEKQRQELDDIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD++ F+ A L  +
Sbjct: 301 KETGNTQAVMDGDINPFIDAYLRSQ 325


>gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223629|sp|A2RLF5|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 365

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 220/350 (62%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++N      D D   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  TMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  +   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+TH+PTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG++D F+ A L  
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363


>gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367]
 gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           brevis ATCC 367]
          Length = 343

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/336 (47%), Positives = 215/336 (63%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + +S    +   P  W +   A++L+ E   +   +   + +  ++ D ++ LEL  E
Sbjct: 1   MNESISVNEGQMAQPDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  +  E   +    +  +   +   LL+ + D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EPDAEMQAEFETDFATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+  FK   L+   G+ AG+ S TL I G NAYG+L+ E+GVHRLVRISP+DS
Sbjct: 121 RMYTRWAEQHDFKVTVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DDS++I+I+ ++ ++D YRASGAGGQHVN T SAVRITHIPTG
Sbjct: 181 AGRRHTSFASVDVLPELDDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V Q Q +RSQ +N+  A  MLRAKLYE   +K+ +     E  + EIGWG QIRSYV  
Sbjct: 241 IVTQSQAQRSQLQNRQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLD F+ A L  +
Sbjct: 301 PYTMVKDHRTNYETGNGQAVMDGDLDPFIDAFLQWQ 336


>gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
 gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
          Length = 349

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 184/342 (53%), Positives = 240/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+     RL+ +  + EDP +W +   A+ L RER  L+  +  I E+   L D  
Sbjct: 6   GGIFDYAERKDRLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADAD 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL LA EE D + L+    +L+  +  V   +F  + SGE D+ +A++++ AG+GGTE+
Sbjct: 66  DLLALAAEESDEATLESLVADLKSHEARVSELEFRRMFSGEMDACNAFVDIQAGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RW E+R FKTE +E+  GE AGIKSAT+  +G  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSFSS++V P VDDS+EIEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 186 VRKSPFDSGNRRHTSFSSVFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQHKNK QA   L++KLYELE+QKR       E +K++IGWG 
Sbjct: 246 RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKSDIGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +   VLDG+LD F++A+L 
Sbjct: 306 QIRSYVL-DQSRIKDLRTGVEIANTQGVLDGNLDPFIQASLK 346


>gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 332

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  + ++   L D   LLELA+E +D  
Sbjct: 2   QEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDED 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L  +  ++   +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY R
Sbjct: 62  TFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRH
Sbjct: 122 WAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQC
Sbjct: 182 TSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA+  LRAKLYE E+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDS-RI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 301 KDLRTSVETRNTQAVLDGDLDRFIEASLKA 330


>gi|313903604|ref|ZP_07836994.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466157|gb|EFR61681.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 372

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 215/342 (62%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD     + +  +     +P  W +   A+  +R+ + L   +   + +  +L D  +L
Sbjct: 2   IFDLAGKRREIERIEQAMTEPGFWDDPERAQHQVRQLKVLKGPVERYEALDRQLEDLQVL 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            ELA EE D S++ E  + + +++  +   + E LL+G  D  DA + +H GAGGTESQD
Sbjct: 62  AELAAEEADVSVIPELEEGIAQVEEGLRQLELELLLTGPYDGYDAIVSLHPGAGGTESQD 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML RMYTRWAE R ++ E L++ +GEEAGIKS T  ++GPNAYG+L+ E GVHRLVR
Sbjct: 122 WAQMLWRMYTRWAEDRGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+S+ V P + DS EIEI   D RID +RA G GGQHVN T+SAVRI
Sbjct: 182 ISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H+PTG+V  CQ ERSQH N+  A  +L+A+L     ++R +          EI WG QI
Sbjct: 242 VHLPTGIVATCQNERSQHSNRETAMKILKARLARYYEEQRLKEIAALRGDVGEIAWGNQI 301

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RSYV QPY +VKD RT +E  +   V+DG LD F+ A L  +
Sbjct: 302 RSYVFQPYTLVKDHRTGVEVGNVQAVMDGQLDVFINAYLKWE 343


>gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas
           albilineans]
          Length = 373

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 179/343 (52%), Positives = 246/343 (71%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG FD+D   +RL  +  + E P +W +   A+ L RER +L+  +  I  + + L ++
Sbjct: 20  YGGFFDYDAKKERLEEVARELESPDVWNDPERAQGLGRERANLEKTVGGIASVLEGLNES 79

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L LLELA  E+D    Q    ++ R + +VE  +F+ + SG+ DS +A++++ AGAGGTE
Sbjct: 80  LELLELAESENDEDTAQGVIADVDRFQTQVEKLEFQRMFSGQMDSCNAFVDIQAGAGGTE 139

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA +LLRMY RW E R +KTE +E+  GE AGIKSATL ++G  AYGWLK E GVHR
Sbjct: 140 AQDWAEILLRMYLRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHR 199

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS++RRHTSF+S++V P VDD+I+I+I+ +D + D YR+SGAGGQHVN T+SA
Sbjct: 200 LVRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESA 259

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG
Sbjct: 260 VRITHVPTGIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKSDIGWG 319

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L 
Sbjct: 320 SQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLK 361


>gi|238897260|ref|YP_002922937.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465015|gb|ACQ66789.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 348

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +N + E P +W+    A+ L +ER  L   +  + +++  L
Sbjct: 1   MKLSGGIFDYDEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLSQLEKEL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LL+LA+E  D     E    L+ I  ++   +F  + SG+ D  D YL++ +G+G
Sbjct: 61  KDVSTLLDLAIEAQDRETFNEAVFELEAIDKKLNRLEFRRMFSGKNDFADCYLDLQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWANMLLRMY RWA+ + FKTE +EI DGE AGIKSATL I G +A+GWL+ E G
Sbjct: 121 GTEAQDWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S +VYP ++D+I+I+I+ +D RID YRASGAGGQH+N T
Sbjct: 181 VHRLVRKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +V QCQ +RSQHKNK QA+  L+AKLYE E+QK+     I E +K++I
Sbjct: 241 ESAVRITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIMEDNKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSY+L     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 301 GWGSQIRSYILDDS-RIKDLRTGLETRNTQAVLDGYLDKFIEASLKA 346


>gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
 gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
          Length = 367

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 239/351 (68%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + + D+  +RL  +N        W +  +A  + +E++  +  +S   E+
Sbjct: 13  LQNKAQNIAKILNPDSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L E+A  E D S L+   +N++ ++  ++  + E +LSGE DS +A + + 
Sbjct: 73  KAELDDARELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSTNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RW+E+R FK E L+  DGEEAGIK A  +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELE  K+ E   +  + 
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+EIGWG QIRSYVL PYQ VKDLR+N   +    VLDGD+DD +++ L +
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVLVL 361


>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
 gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
          Length = 372

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 226/354 (63%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  LN +  + D D   ++L  L  +   P LW +   A+ +  +  +L   ++ ++ 
Sbjct: 12  ELTGTLNSIQDVLDLDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVES 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D  +L ELA  EDD    +E    L  +K ++   +  +LLSGE D+ +A + +
Sbjct: 72  LGQRLEDLTVLYELAAAEDDEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++ AGG ++ DWA MLLRMY RWAE++ + TE  E    EEAGIKSAT  +K P AYG L
Sbjct: 132 NSQAGGVDAADWAQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I+E D R+D YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L++KL E + Q+     N    
Sbjct: 252 GVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKATAMAVLQSKLLERKRQEEAAALNEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             T   WG QIR+YVL PYQ+VKDLRT  E  +PS VLDGDLD+F+++ +   +
Sbjct: 312 EATT-SWGTQIRNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEIRWTR 364


>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 378

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/355 (45%), Positives = 225/355 (63%), Gaps = 3/355 (0%)

Query: 2   KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           +LS +   L  LG   D +N  +R+  L+   E+P  W +   A  L  E  HL N +  
Sbjct: 10  ELSTKAEPLEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNELES 69

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
            + ++    D   L+E+ +EE D S++ E  + L     +++    + LLSGE D+ +A 
Sbjct: 70  YQSLKQSYDDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAMNAI 129

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L ++AGAGGTE+ DWA ML RMYTRWAE+R F  + L+  +GEEAGIKS T+ I G  AY
Sbjct: 130 LRLNAGAGGTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGDYAY 189

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+L+ E G+HRLVRISP+++  +R TSF S  V P ++  I+++I E D +++ +R+SGA
Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDVDIREEDIKMEVFRSSGA 249

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N T SAVR+ HIPTG VV CQ+ERSQ +N+ +A  ML+AKLY  E +++E     
Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEAKLAG 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                 + GWG QIRSYVLQPY+MVKDLRT  E  +   VLDGD+D F+ A L  
Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYLKW 364


>gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
 gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
          Length = 369

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 166/350 (47%), Positives = 228/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L  +G   D +    + S L   + D   W ++  A+ ++++ ++  + I    ++ 
Sbjct: 15  KAKLVEMGNRLDIEGCKVKASELEEMSMDNAFWNDIERAQSVLQQLKNYKDRIEKYDKLC 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D L+L+E+A E++D  + +E     +  + +       +LL  E D N+A LE+H 
Sbjct: 75  GSFEDILVLIEMANEDEDIGLAEEAKACAKTFEEDYSEMLTATLLDQEYDRNNAILELHP 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMYTRWA+++ FK E L+  DG+EAGIKS T+ I G NAYG+LK 
Sbjct: 135 GAGGTEACDWVAMLFRMYTRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+G+HRLVRISP+DS+ RRHTSF+S  V P + D IEI+I   D RIDTYR++GAGGQHV
Sbjct: 195 EKGIHRLVRISPFDSSGRRHTSFASCDVIPEITDEIEIDIRPEDLRIDTYRSTGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PT +VVQCQ ERSQ +N+ +A  ML+AKLYE E ++R +  +     K
Sbjct: 255 NTTDSAVRITHLPTNIVVQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEK 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +I WG QIRSYV  PY MVKD RT+ E  + S V+DGD+D FM A L  
Sbjct: 315 KDIAWGSQIRSYVFHPYNMVKDHRTSEETGNTSAVMDGDIDRFMNAYLGW 364


>gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
 gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
          Length = 327

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
 gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
          Length = 329

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 177/328 (53%), Positives = 228/328 (69%), Gaps = 1/328 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + E P +W     A+ L +ER  L+  +  I ++   + D   LLELA+E DD    
Sbjct: 1   MNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEADDEETF 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  ++ ++E  +F  + SGE DS D Y+++ AG+GGTE+QDWA+ML+RMY RWA
Sbjct: 61  NEAGAELDALQGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTS
Sbjct: 121 ESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ 
Sbjct: 181 FSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG QIRSYVL     +KD
Sbjct: 241 DRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           LRT +E  +   VLDGDLD F++A+L  
Sbjct: 300 LRTGVETRNTQAVLDGDLDKFIEASLKA 327


>gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SM4/1]
          Length = 333

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+D S++ E  
Sbjct: 1   MEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RWA+K+ 
Sbjct: 61  GMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  +R TSF S 
Sbjct: 121 FTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + + +++E++  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKEDLDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A  ML+ KLY ++ ++  E  +       +I +G QIRSYV+QPY +VKD RT 
Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + VLDGD+D F+ A L  
Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324


>gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor
           salsuginis DSM 16511]
 gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor
           salsuginis DSM 16511]
          Length = 372

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 171/352 (48%), Positives = 234/352 (66%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS ++  +  +   +   +RL  +    ++P  W +   A  + +E+  L+  ++   E 
Sbjct: 13  LSTKMENITNIVKPEEIRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D     ELA  E D   L+   D  + +K  ++  +   +LSGE DS +A + +H
Sbjct: 73  KAALEDAQEYFELAKSEGDEETLEMLYDEAENLKEHIQQLEVAIMLSGEHDSANAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RWAE+  FK E L+   GEEAGIK  + +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D+N++RHTSF+S+ V P ++D I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 VENGIHRLVRISPFDANAKRHTSFTSVMVSPEINDDIDIEIEDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A  ML+++LYE E+ K++  A I    
Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKAAAMKMLKSRLYEYEMAKKQ--AEIDGIE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++IGWG QIRSYVLQPYQ VKD R+    T+   +LDGD+D  ++  L  +
Sbjct: 311 KSDIGWGHQIRSYVLQPYQQVKDTRSGQAFTNVEAILDGDIDKLLEGVLIAQ 362


>gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
 gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
          Length = 327

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N+  A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083]
 gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 375

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 197/352 (55%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD A  RL   N + EDP LW +   A+ LM+ERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLDWDTAEFRLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D + ++EL   E+D  ++ E  + L  +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKQELSDQVEMIELGEMEEDEDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEKR +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAM 361


>gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
 gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
 gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
 gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
 gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
 gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
 gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
 gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
 gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
 gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
 gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
 gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62]
 gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
          Length = 327

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
 gi|156869337|gb|EDO62709.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
          Length = 374

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 158/348 (45%), Positives = 231/348 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L      +   + +  L      P  W ++ +++ +++    L N +S  + +    
Sbjct: 18  IKDLKEALGLEAMKKEIGELEEAQTSPDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D L L+E+  EE+D SIL +    +++++ E+E ++  +LL+GE D+N+A L  HAGAG
Sbjct: 78  EDALTLIEMGDEEEDLSILPDAQQEVEKVRKELEEQRLATLLTGEYDANNAILTFHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY RW E+  FK + L+  DGEEAG+KSA +LI+G NAYG+LK E G
Sbjct: 138 GTEAQDWAEMLYRMYCRWGERHNFKVKTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSEAG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+D++ RRHTSF+S+ V P +++ +E+EI+  D ++D YRASGAGGQ VN T
Sbjct: 198 VHRLVRVSPFDASGRRHTSFASLEVMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTG+VV CQ ERSQH+N+  A  ML +KL E++ ++  +  +  +  + EI
Sbjct: 258 SSAVRLTHIPTGIVVSCQVERSQHQNREVAMKMLASKLMEIKEREHLDKISDIKGVQKEI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           GWG QIRSYV  PY + KD RTN E  + + V+DGD+D F+ A L  +
Sbjct: 318 GWGSQIRSYVFMPYTLAKDHRTNYEMGNINAVMDGDIDGFINAYLKQE 365


>gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
 gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
          Length = 374

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 190/352 (53%), Positives = 244/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    +W+ A  RL   N + EDP+LW +   A+ LMR+RQ L +AI   K I
Sbjct: 12  IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYKGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D++ L+EL   E+D  ++++  + L+ +K +   K+ E+LL GE D NDA+LE+ 
Sbjct: 72  RQDLDDSVELIELGEMEEDDEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLEIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+ML RMY RWAE R F  +  E   G EAGIKSAT  IKG NAYGWLK
Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+     R TSF+++  YPV+DD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGTHRLVRISPFG-KGTRETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYV+QPYQMVKDLRTN E      VLDGDLD FM ATLA+K
Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361


>gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
 gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
          Length = 380

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
 gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
          Length = 367

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 238/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+D    RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSGEIRVYLDYDGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKVLEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+++ALEE D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  AGGIDDNRLLIDMALEEGDEDSFAAIEEDVAELEKQMAELEFKRMFNQPADVNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMY R+ E++ FK E +E  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYVRYGERKGFKVEIMEQDDGEIAGINRATIRLEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRHSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQ Q  RSQH N+     MLRAKL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHDNRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRT+ E  +   VLDGDLDDF++A+L 
Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTSHETGNTKAVLDGDLDDFIEASLK 364


>gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 347

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 172/342 (50%), Positives = 239/342 (69%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    +L  +  + EDP +W N   A+ L RER+ L+N +  +  + D L D  
Sbjct: 4   GGIFDYDQKADQLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSLRDTG 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L  +A EEDD   L   + ++  I+ EV   +F  + +  AD  + ++++ AGAGGTE+
Sbjct: 64  ELFAMAREEDDDETLNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY R+AE++ +  E LE  +GE AGIK+A++ I G  AYG L+ E G+HRL
Sbjct: 124 QDWAAMLLRMYLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETGIHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+RRHTSF S+  YP +DDS E+EI+ ++ RIDTYRASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSNARRHTSFCSVSAYPEIDDSFEVEINPAELRIDTYRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT +VVQCQ +RSQH+N+A+A  ML++++YE E++KR+      E +K++IGWG 
Sbjct: 244 RITHLPTNIVVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDIGWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTN+E  +   VLDGDLD F++A+L 
Sbjct: 304 QIRSYVL-DQSRIKDLRTNVEVGNTQGVLDGDLDQFIEASLK 344


>gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           KF147]
 gi|24638157|sp|Q9CGX1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp.
           lactis KF147]
 gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 365

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 221/350 (63%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + ++N      D +   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  AEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  NMLEEAQTMLEMLQEEADEEMQAELEEMTIALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  L   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+++ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVDVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG+LD F+ A L  
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYLRW 363


>gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
 gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
          Length = 327

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + + +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
 gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
          Length = 368

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L    D+D+   RL+ L    ED  +W +    + + RE++ L++ +  +  +
Sbjct: 16  LDSRASELRRFLDFDSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSM 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +L D   L ++A +E D + L   S + + I+  +   +F  + SG  DSN+ ++++ 
Sbjct: 76  EKQLGDAKELFQIAKDEADEAALVSISLDAENIEKAIANLEFRRMFSGPMDSNNCFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA ML RMY R+ E++ F  E LE   G+ AGIKSATL I G  AYG+L+
Sbjct: 136 SGSGGTEAQDWAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D RIDT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITH PTG+VVQCQ  RSQH+NKA A  ML+++L+E EL+KR E     E +
Sbjct: 256 INKTDSAIRITHNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAIEEN 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT+IGWG QIRSYVL     +KDLRTN+E  +  +VLDGDL+ F++A+L 
Sbjct: 316 KTDIGWGHQIRSYVL-DQSRIKDLRTNVEVGNTQNVLDGDLNSFIEASLK 364


>gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
 gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
          Length = 327

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
 gi|166225119|sp|A5IM04|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
           petrophila RKU-1]
          Length = 367

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 163/350 (46%), Positives = 234/350 (66%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + +   + +  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 12  ELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL+  ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 72  VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++K++      + 
Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV  PY MVKD RT +E  +   V+DGD+D F++A L
Sbjct: 310 ELKDISWGNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359


>gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
          Length = 369

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 243/349 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++ + L G  D +    RL+ +      P  WQN  ++  +++ER  L + ++  +E 
Sbjct: 15  LSQRYSQLRGRLDLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALTHLLTVWQEQ 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D  +LLELA EE D     +   +L+  +  ++  + E LL GE D  DA + +H
Sbjct: 75  GKKIEDLEVLLELAQEETDEQAFVDVLTDLKVQERALQQLELEMLLGGEDDDKDAIITIH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMY R+AE++ F+TE  ++  G+EAG+KS+T  + GP+AYG+LK
Sbjct: 135 AGAGGTEAQDWAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVSGPHAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D++ RRHTSF++++VYP  D+ I+I++ E D RIDT+RASGAGGQH
Sbjct: 195 SESGIHRLVRISPFDASGRRHTSFAAVFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+THIPTG+VV  Q ERSQH+N+  A  +L+++LYELE  KR+E A +   +
Sbjct: 255 VNKTSSAVRLTHIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKRQEKAQVVLDA 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +I WG QIRSYVLQPY+++KD RT  E+ +   VLDGDLD F++A L
Sbjct: 315 QKDIAWGSQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363


>gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           SR1/5]
          Length = 332

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W N   ++M M++ + L + I     ++ ++ D   ++E+  EE+D  I+ E  
Sbjct: 1   MEAPDFWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYEENDPEIVPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +   +  + ++LLSGE D  +A ++++AGAGGTE+ DW  ML RMY+RWAEK+ 
Sbjct: 61  EMLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAG+KS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ Q+ EE  +      T+IGWG QIRSYVLQPY MVKD RTN
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG +D F+ A L  
Sbjct: 301 EETGNVDAVLDGGIDIFINAYLKW 324


>gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
 gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
          Length = 333

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 194/319 (60%), Positives = 245/319 (76%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ +MRER  L N I  ++ ++  + D   L+ELA  E D  ++ E    L+ +
Sbjct: 2   WNDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             E + ++ ESLLSGEADSND YLEV+AGAGGTE+QDW  MLLRMYTRWAE   +K   +
Sbjct: 62  AEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  +GE+AG+KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+
Sbjct: 122 ESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DDSIEIEI+++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A 
Sbjct: 182 DDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRAT 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  MLRA+LYE ELQKRE  A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E  +P
Sbjct: 242 AMQMLRARLYEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNP 301

Query: 336 SDVLDGDLDDFMKATLAIK 354
             VLDGDLD FM A LA++
Sbjct: 302 DAVLDGDLDAFMAAALAMR 320


>gi|330719765|gb|EGG98281.1| Peptide chain release factor [gamma proteobacterium IMCC2047]
          Length = 365

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 179/352 (50%), Positives = 240/352 (68%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + + L G  D+     RL  +  + ED  +W     A+ L +ER  L+N ++ I  
Sbjct: 13  ELQERTDVLRGYLDYAEKKDRLEEVERELEDSAVWDEPERAQALGKERSQLENIVATIDR 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D   LL +A+EEDD   + E S  ++ +  ++   +F  + SGE D N A+L++
Sbjct: 73  LDSGISDGHELLAMAIEEDDEDTVNEVSAEIETLDAQLAKLEFRRMFSGEMDENSAFLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA MLLRMY RW E++ FK E +E+  G+ AGIK AT+  +G  A+GWL
Sbjct: 133 QAGSGGTEAQDWAEMLLRMYLRWGEQKGFKVELMEVSAGDVAGIKGATIKFEGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS SRRHTSFS+++V P +DD++EI+I+ +D RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGSRRHTSFSAVFVSPEIDDNVEIDINPADLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH PT VVVQCQ +RSQH+NK  A   LRAKLYELE+QKR + A   E 
Sbjct: 253 HVNKTDSAVRITHEPTNVVVQCQSQRSQHQNKDFAMKQLRAKLYELEMQKRNDAAQAQED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K +IGWG QIRSYVL     +KDLRTN+E ++   VLDG LD F++A+L  
Sbjct: 313 NKADIGWGSQIRSYVL-DSSRIKDLRTNVETSNTQAVLDGGLDMFIEASLKA 363


>gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 341

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/336 (50%), Positives = 223/336 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    +   P  W +  +A+ ++ +      +   I+++  ++ D  + LEL  E
Sbjct: 1   MEEDIADYEHQMLAPDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D  +L E  D +      +   + + LLSG  DS +A LE+H GAGGTESQDW +MLL
Sbjct: 61  SQDLDMLSEAEDIMTVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWA+K+ F+ E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWADKQGFQVEVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N+RRHTSF+SI V P +DDSIEIEI+  D R+DTYRASGAGGQH+N T SAVRITHIPTG
Sbjct: 181 NARRHTSFASIEVTPEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V Q Q +RSQ +N+ QA  ML+AKLY+ E ++R +     +  + EIGWG QIRSYV  
Sbjct: 241 IVTQSQAQRSQFQNRDQAMAMLKAKLYQREEEERAKEMAAIKGQQLEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E  +   V+DGDLD FM A L  +
Sbjct: 301 PYSMVKDHRTGYEVGNSQAVIDGDLDGFMDAYLKWQ 336


>gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
 gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
          Length = 327

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1]
 gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1]
          Length = 370

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 230/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + N +  + D ++    L  L+ +   P  W +  +A+ +  +R  + N I  I+ 
Sbjct: 11  QLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANKIQEIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D    +EL   E D     E    ++ +  E+   +  SLLS E D  +A + +
Sbjct: 71  VEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLETASLLSEEYDMKNAIVTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  MLLRMY RWAEK  F  E ++    + AGIKSAT ++KGP AYG+L
Sbjct: 131 QAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVKGPYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSFS++ V P + D +++EI E D RIDT+RASGAGGQ
Sbjct: 191 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDEVKVEIKEEDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRI HIPTG+ V CQ ERSQ +N+A+A  ML+AKLY+ EL+K++E     E 
Sbjct: 251 HVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQKEKQKELEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DGD+D F+++ L  +
Sbjct: 311 EKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYLKWR 363


>gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5]
 gi|259585246|sp|C3PMX2|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5]
          Length = 368

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 188/352 (53%), Positives = 249/352 (70%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + + +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 311 TKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 362


>gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
 gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 369

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/350 (46%), Positives = 228/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS+ +  +G L D       L  L    ++   W N+  A+ +    + + + I     
Sbjct: 13  ELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDLYNN 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            Q  + D  +L+E+A+EE+D S++ E  + +  +   VE  + E +LSGE D+N+A + +
Sbjct: 73  FQSSVEDIKVLIEMAIEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNNAIVTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+G GGT++ DW  MLLRMYTRW EK+ F  E L++  G+EAGIKSATL + G  AYG+L
Sbjct: 133 HSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +     +EI+ SD ++DTYRASGAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VVQCQ ERSQ +N+  A NML++KL EL+ +  +E       
Sbjct: 253 HVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEKIEDLTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTNI+      V+DG+LD F+K  L
Sbjct: 313 DLKDMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362


>gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
 gi|254790921|sp|B9DRN6|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
          Length = 366

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 222/354 (62%), Gaps = 2/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++   +L       D D   + ++ L  K  +P  W + I A+   +E   L +      
Sbjct: 11  VENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFH 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ +   +  + LE+  E  D SI +E  + L +++  +   +   LLS   D N+A LE
Sbjct: 71  DMLELSDETELYLEMLAE--DESIKEELEEALVKLEQILSQYEMTLLLSEPYDHNNAILE 128

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H G+GGTE+QDWA+ML RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG+
Sbjct: 129 IHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGF 188

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGG
Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGG 248

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+THIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +
Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALK 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K EI WG QIRSYV  PY MVKD RTN E      V+DG++D F+ A L  +
Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLKWR 362


>gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
 gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
          Length = 355

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 219/347 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GGLFD D   + ++    +   P  W +   A+  +     L         +QD++
Sbjct: 1   MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  E+   E D  +  E  DN   ++  +   + E LL G  D +DA LE+H GAG
Sbjct: 61  EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L  E+G
Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L  
Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYLQW 347


>gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7]
 gi|24638155|sp|Q92IQ2|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish
           7]
          Length = 368

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 188/352 (53%), Positives = 249/352 (70%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + + +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAHLAM 362


>gi|309803856|ref|ZP_07697941.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325913296|ref|ZP_08175664.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|329920534|ref|ZP_08277266.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
 gi|308164090|gb|EFO66352.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325477399|gb|EGC80543.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|328936210|gb|EGG32663.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
          Length = 359

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNYHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
 gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
          Length = 328

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P+ W +   A++++ E   L + +    ++ +   +  +  EL  EE D  +  E +
Sbjct: 1   MLHPNFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKEESDEDLQNELA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  EELTELTKRLAQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+ +++++E+        + EIGWG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 TESGNVQGVMDGDLDPFINAYLRSR 325


>gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2]
 gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira
           crunogena XCL-2]
          Length = 332

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/329 (51%), Positives = 231/329 (70%), Gaps = 1/329 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            +  + EDP +W +   A+ L +E+  LDN ++ I++++  L     +LE+A  + D  +
Sbjct: 3   EVERELEDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMAEMDADQEM 62

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           + E    L R++ ++E  +F+ + SGE D+N+ YLE+ AG+GGTE+QDWANM+LRMY RW
Sbjct: 63  VDEVVSELARLEEKLEQLEFQRMFSGELDANNCYLEIQAGSGGTEAQDWANMILRMYLRW 122

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE   FK E LEI  G+ AGIK AT+ ++G  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 123 AESHGFKAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSGNRRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+++ P +DDS E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT  V QCQ
Sbjct: 183 SFASVFISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNTVTQCQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
             RSQH+NKA+A   LRAKLYELE+  R       E +K++IGWG QIRSYVL     +K
Sbjct: 243 NGRSQHQNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWGSQIRSYVL-DSGRIK 301

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           DLRTN+E  + + VLDGDLD F+  +L  
Sbjct: 302 DLRTNVETGNTNGVLDGDLDQFIIPSLKA 330


>gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
 gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
          Length = 365

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 227/346 (65%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L    + D     ++ L  KT     W +   A+  ++    L         ++ + 
Sbjct: 16  LTELRDSLEIDKIKFEINQLEQKTFAADFWNDQELAQKTLQRLNDLKEKFDNFTLLEKKY 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D L L+EL  E DD  +  E  + ++  K ++E  + ++LLSG+ D  +A L +HAGAG
Sbjct: 76  DDLLTLIELCTETDDEELRTELLNEMKDFKKQLEKMKLQTLLSGKYDGRNAILTLHAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +MLLRMYTRWAE + +K   L++  G+EAGIKSA +L++GPNAYG+LK E+G
Sbjct: 136 GTEAQDWVSMLLRMYTRWAEDKGYKVSILDMLPGDEAGIKSAAVLVEGPNAYGYLKSEKG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+  RRHTSF+S+ V P +DD IEI+I   D +IDT+R+ GAGGQHVN T
Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVMPEIDDDIEIDIKPEDLKIDTFRSGGAGGQHVNKT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIPTG VV CQ ERSQ  N+  A  +LRAKL+++  +++++  +    S+ EI
Sbjct: 256 ESAVRITHIPTGTVVSCQNERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEI 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSY+  PY +VKD RT++E  +   V+DG+LD+F+ A L 
Sbjct: 316 AWGSQIRSYIFHPYSLVKDHRTDVEVGNVQAVMDGELDEFINAYLK 361


>gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2]
 gi|75536187|sp|Q4UKS1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2]
          Length = 368

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 188/352 (53%), Positives = 250/352 (71%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D +++ +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDTLELEEMAEAENDLETLSQIEQDLKNLSVIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DW ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQMVKDLRT+ E +    VLDGDL+DF+ A+LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFVSASLAM 362


>gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium]
          Length = 364

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 176/351 (50%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++ + L    D +    RL  +  + E+P +W N  EA+ L +E+  L+         
Sbjct: 13  LTQRSSALSAHLDLEEKQGRLEEVLLEMENPDIWSNPDEAQALGQEKSKLELICQTFARA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLE+A  E+D   +     +L  ++L +E  +FE + SGE D+N AYL++ 
Sbjct: 73  NSILEDAKELLEMAQSENDKDTVNSVIGDLNTVELSIEKLEFERMFSGELDANSAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA M+LRMY RW EK KFK + +E+  GE AGIKSAT+   G  A+GWL+
Sbjct: 133 SGSGGTEAQDWAEMILRMYLRWGEKHKFKVKLMEVSAGEVAGIKSATIHFNGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+++N +RHTSFSS++V P +DD+IEI I+ SD RIDTYRASGAGGQH
Sbjct: 193 SEIGIHRLVRKSPFNANGKRHTSFSSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT  VVQCQ  RSQH NK QA   L++KLYELE+Q+R +     E +
Sbjct: 253 VNKTESAVRITHLPTNTVVQCQDGRSQHANKDQAMKQLKSKLYELEMQERNKEKQDLEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E T+  DVLDG+LD F++A+L  
Sbjct: 313 KSDIGWGHQIRSYVL-DQSRIKDLRTGVESTNTQDVLDGNLDKFIEASLKA 362


>gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
          Length = 327

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EI WG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
 gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
          Length = 355

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 219/347 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GGLFD D   + ++    +   P  W +   A+  +     L         +QD++
Sbjct: 1   MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  E+   E D  +  E  DN   ++  +   + E LL G  D +DA LE+H GAG
Sbjct: 61  EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L  E+G
Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L  
Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYLQW 347


>gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7]
 gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7]
          Length = 364

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L    G  D +   + ++ L  K  +P  W + + A+   +E   L N      +
Sbjct: 12  ELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNTYGNFHQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D   ++ ILL+   E  D S+  E  + L  +   +   +   LLS   D N+A LE+
Sbjct: 72  MLDLYDESEILLDFLAE--DESVRDELVEKLVELDKTMTAYEMTLLLSEPYDHNNAILEI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTE+QDW  MLLRMY R+   + F  E L+   G+EAGIKS TL   GPNAYG L
Sbjct: 130 HPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IEIEI + + ++DT+R+ GAGGQ
Sbjct: 190 KSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+THIPTG+V Q   +R+Q+ N+ +A  +L+AKLY+LE +K+    +  + 
Sbjct: 250 NVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K EI WG QIRSYV  PY MVKD RT  E      V+DGDLD F+ A L  +
Sbjct: 310 DKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
 gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
          Length = 350

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 248/344 (72%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           + GLFD   A +RL  L   T +P LW + + A+ L+RE+  L+  ++ + +++  L D 
Sbjct: 1   MRGLFDIKTATKRLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDT 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L  LA  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTE
Sbjct: 61  LELEALAETENDLETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHR
Sbjct: 121 SHDWASIMMRMYLRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSA
Sbjct: 181 LVRISPFNAAGKRMTSFASSWVYPEIDDNISITIDDKDLRIDTFRASGAGGQHVNTTDSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG
Sbjct: 241 VRITHIPTGTVTQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSY+LQPYQMVKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 301 HQIRSYILQPYQMVKDLRTDYETSDTRGVLDGNLEEFVSASLAM 344


>gi|224499863|ref|ZP_03668212.1| peptide chain release factor 2 [Listeria monocytogenes Finland
           1988]
 gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
 gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
          Length = 338

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 170/336 (50%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 369

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 159/349 (45%), Positives = 224/349 (64%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L+ +G   D     + +  L  ++ DP  W +   A+ +MR    L N +    E+
Sbjct: 13  MLERLDRIGVRLDLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRNQVETWTEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L++LA  +DD  +  E +   +R+   VE  +   LLSG+ D +DA + +H
Sbjct: 73  HQQAADLRELIDLAEADDD--LRDEIAAETERVLRGVEQLELNLLLSGQYDEHDAIMAIH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GG ++QDWA ML+RMY RWA  R F+ + L++ +GEEAGIKSAT+ I+GP AYG+ K
Sbjct: 131 AGTGGVDAQDWAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEIRGPYAYGYTK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE G HRLVR+SP+D   RRHT+F+ + V P V++  EI I + + RIDTYR+SGAGGQH
Sbjct: 191 GEAGTHRLVRLSPFDQAHRRHTAFALVEVLPQVEEDTEIVIRDDEIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L EL ++KREE     +  
Sbjct: 251 VNKTDSAVRITHLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRKREEEQAKLKGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +GWG +IRSYVLQPY MV D RT    ++   V +G++D F++A L
Sbjct: 311 HVAVGWGNRIRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYL 359


>gi|167462917|ref|ZP_02328006.1| peptide chain release factor 2 in translation [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383023|ref|ZP_08056853.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153046|gb|EFX45506.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 332

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+  + E   +  ++   + +     D  ++ +LA EEDD S+  E +
Sbjct: 1   MAAPDFWDDQEKAQKTIAELNAIKGSVEQFQALSSEFGDIEVMAQLAEEEDDESLAAEVA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++++ I  ++E  + + LLS   D  +A LE+H GAGGTESQDWA MLLRMY RWAEK  
Sbjct: 61  ESIKGIVGKLEGFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD +++EI   D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 DVVPEIDDDVDVEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  +LR+KLYE +++++E+        +++I WG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNRERAMKLLRSKLYEKKIEEQEKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 AETGNAGAVMDGDLDMFIDAYLRQQ 325


>gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
 gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
          Length = 359

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNDYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|259501054|ref|ZP_05743956.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|309807259|ref|ZP_07701230.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|309808840|ref|ZP_07702723.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|312874339|ref|ZP_07734370.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|312875084|ref|ZP_07735101.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|325911468|ref|ZP_08173880.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
 gi|259167748|gb|EEW52243.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|308166350|gb|EFO68558.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|308167916|gb|EFO70051.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|311089374|gb|EFQ47801.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|311090105|gb|EFQ48518.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|325476818|gb|EGC79972.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
          Length = 359

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1]
 gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1]
          Length = 327

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L   ++  K++Q+   +  + LEL  EE+D  + +E  
Sbjct: 1   MLQPDFWNDQQQAQGVINEANGLKELVNEYKDMQEMQENLEVTLELVKEENDAELQEELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  + +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMY RWAEK+ 
Sbjct: 61  EETKDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH PTGVVV CQ ERSQ
Sbjct: 181 EVMPEFNEEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+  ++++E+        + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNREQAMKMLKAKLYQKRIEEQEQELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD++ F+ A L  +
Sbjct: 301 TEMGNVQAVMDGDINGFINAYLRSR 325


>gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
 gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
          Length = 361

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/343 (41%), Positives = 215/343 (62%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD     +++S L  +  +P LW +   A+ +M++   L + ++    ++ +L    
Sbjct: 15  GGIFDLATKQEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLESQLISLD 74

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L++L   E D ++  E +  ++  + E+  ++   LLSG  D  DA++ + AG GGT++
Sbjct: 75  ELIDLTEAEGDATLYTEIAAEVRAAQKELAQRELALLLSGPYDDRDAFVSIQAGMGGTDA 134

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+M+LRMY RWAE R +    +++  G+EAGIKSATL ++GP AYG ++ E GVHRL
Sbjct: 135 QDWADMMLRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAEAGVHRL 194

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +R+SP+++   R TSF+ + V P VDD+ E+ I   D RID +R+ G GGQ VNTTDSAV
Sbjct: 195 IRLSPFNAAHTRQTSFARVEVVPEVDDAPEVTIKPEDLRIDVFRSGGHGGQGVNTTDSAV 254

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTG+VV CQ ERSQ +N+  A  +LR +L E ELQ++ E          +  +G 
Sbjct: 255 RLTHLPTGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARLRGEHRDAAFGS 314

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           Q+R+Y L P  +VKD RT  E ++   VLDG LD F++A L  
Sbjct: 315 QMRTYYLHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYLRW 357


>gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453]
 gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453]
          Length = 339

 Score =  368 bits (944), Expect = e-99,   Method: Composition-based stats.
 Identities = 169/332 (50%), Positives = 224/332 (67%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +     K   P  W +  +A+ L+ E   + +++   +++Q    D +++ ELA EE D 
Sbjct: 2   IENFEEKMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADEEGDD 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+  E  + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYT
Sbjct: 62  SLAGEIGETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR
Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S  V P ++D IE++I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV 
Sbjct: 182 HTSFVSCDVVPEINDEIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ KN+ +A  MLR+KLYE +++++++        ++EI WG QIRSYV  PY M
Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQSEIAWGSQIRSYVFHPYSM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KD RT +E  +   V+DGDLD F+   L  +
Sbjct: 302 AKDHRTQVETGNIGAVMDGDLDAFIDGYLRSQ 333


>gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99]
          Length = 338

 Score =  368 bits (944), Expect = e-99,   Method: Composition-based stats.
 Identities = 170/336 (50%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
 gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
          Length = 331

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A++++ E   L   +    ++ +   +  +  EL  EE D  +  +  
Sbjct: 1   MLQPGFWDDQQAAQVVISESNSLKEQVVEFHDLYETFENLELTYELVKEESDAELQADLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+ +   +   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  EELKDLVKRLNDFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+ +++++E         + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEAELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 TEVGNVQGVMDGDLDMFINAYLRSK 325


>gi|309804632|ref|ZP_07698697.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
 gi|308166024|gb|EFO68242.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
          Length = 359

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SAALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|224438340|ref|ZP_03659267.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
          Length = 365

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 240/351 (68%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + + D+  +R+  +N        W +  +A  + +E++  +  +S   E+
Sbjct: 13  LQNKAQNIAKILNPDSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L E+A  E D S L+   +N++ ++  ++  + E +LSGE DS++A + + 
Sbjct: 73  KAELDDAKELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSSNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RW+E+R FK E L+  DGEEAGIK A  +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELE  K+ E   +  + 
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+EIGWG QIRSYVL PYQ VKDLR+N   +    VLDGD+DD +++ L +
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVLVL 361


>gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
 gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
          Length = 364

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 182/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   + G  D+D+   RL  +N + ED  +W     A+ L RER  L   +  + ++
Sbjct: 13  LTERSQSIRGYLDYDHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A+EE+D   + +    L+ ++ ++   +F  + SGE D N+AYL++ 
Sbjct: 73  SGGLADCQDLLDMAVEENDEGAVGDVVTELEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E S
Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L 
Sbjct: 313 KSDIGWGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDQYLEASLK 361


>gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
          Length = 342

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 237/329 (72%), Positives = 285/329 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S++
Sbjct: 1   MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +  T+P DVLDGDL++FM+A LA +
Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C]
 gi|122425715|sp|Q1RIY5|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C]
          Length = 368

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 192/352 (54%), Positives = 250/352 (71%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + +  RL+ L      P LW +   A+ L+RE+ +L+  +    +
Sbjct: 11  KIEQSLELLRRSLDVETSAARLAELEELAASPDLWNDQANAQKLLREKSNLEEQLGAYNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D L L E+A  E+D  I+Q+   +LQ +       + E L SGEADSN+ +LE+
Sbjct: 71  IRSNLKDALELEEMAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGWL
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQMVKDLRT+ E +    VLDGDL++F+ A+LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 362


>gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2]
          Length = 367

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 163/344 (47%), Positives = 219/344 (63%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD          L  ++     W +   A+  +++   L   +     +     D+L
Sbjct: 18  RSIFDVAGKRVDAERLEAESAAGDFWNDNQRAQEHLKKLTALKRVVEPWDALDRDTSDSL 77

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + E+   E D S+  E       +   +   +F+S+LS   D +D++L +H GAGGTES
Sbjct: 78  EMAEMLKAEGDESMAPELEKQAAELAQRLNDLEFKSMLSEAEDVSDSFLHIHPGAGGTES 137

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWANMLLRMYTRWAE++ FK E +++  GE AGI   TL ++G  A+G+LK E GVHRL
Sbjct: 138 CDWANMLLRMYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESGVHRL 197

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N RRHTSF+S+  Y  V D IE+EI + D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 198 VRISPFDANKRRHTSFASVHAYAEVTDDIEVEILDKDLRIDTYRSSGAGGQHVNVTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +VV CQ ERSQHKNKA A  +LR++LY+L  ++RE         K +I WG 
Sbjct: 258 RITHIPTKIVVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGEKKDISWGS 317

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYV QPYQMVKDLRT++E ++   V+DG +D F++A L  +
Sbjct: 318 QIRSYVFQPYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFLRSQ 361


>gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
 gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
          Length = 345

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 233/329 (70%), Positives = 283/329 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           LN K+EDP+LW +  EA+ LMRERQ LD+ IS ++ ++ ++ DN+ L+EL  EE D  ++
Sbjct: 4   LNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDADVV 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  + L+ +K E   +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 64  REAEEALKALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 124 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIW+YPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 184 FSSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 244 ERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +  T+P DVLDGDL++FM+A LA +
Sbjct: 304 LRTGVTSTAPDDVLDGDLNEFMEAALAHR 332


>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 348

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 169/339 (49%), Positives = 231/339 (68%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  Q+L  L+     P  W +  +A+ +  ER +L + +  +  I++++      +EL
Sbjct: 3   LEDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIEL 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              E D    Q+  + ++ ++  +   + ESLLSGE DS +A + V AG+GG E+ DWA 
Sbjct: 63  LELEPDEEAKQDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACDWAE 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMY RWAEK  +  E ++    + AGIKSAT ++KGP AYG+L+GEQGVHRLVRISP
Sbjct: 123 MLLRMYLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVRISP 182

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +DSN RRHTSF+++ V P + + I++EI+E D RIDT+RASGAGGQHVN TDSAVRITHI
Sbjct: 183 FDSNKRRHTSFAAVSVIPEIGEEIKVEINEDDLRIDTFRASGAGGQHVNKTDSAVRITHI 242

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+VV CQ ERSQ +N+A+A  ML+AKLY+LE++K++E     E  K EI WG QIRSY
Sbjct: 243 PTGIVVSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWGSQIRSY 302

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           V  PYQMVKDLRT  E  +   V+DG++D FM+  L  K
Sbjct: 303 VFHPYQMVKDLRTGYETGNIQAVMDGEIDSFMETYLKYK 341


>gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
 gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
          Length = 326

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L   +   +++ +   +  +  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK +
Sbjct: 64  SLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVD 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D IEIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDDIEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   N     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379]
 gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           propionicus DSM 2379]
          Length = 361

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 173/343 (50%), Positives = 237/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD D   + +  + +K   P  W N   ++ +++ER  L+  +     +  +  D  
Sbjct: 9   GGLFDVDGKRESIQEIESKIAAPGFWDNADSSQGILKERTSLEKIVQLWDSLVRQQEDVR 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +++EL  EE D   L+E  +   R++  VE  +F+ +LSGE D N  ++ ++ GAGGTES
Sbjct: 69  VMIELGEEEADEETLKEVGEMNNRLQQGVEAAEFQRMLSGEHDRNSCFISINPGAGGTES 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY R+ EK+ +KT   +   G+EAGIKSAT  + G  AYG+LK E G+HRL
Sbjct: 129 QDWAEMLLRMYLRYCEKKGWKTSITDYQSGDEAGIKSATFSVSGEYAYGYLKAEAGIHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+DSN+RRHTSF+S++ +P + ++ I+I+I++SD R+DT+R+ GAGGQHVNTTDSA
Sbjct: 189 VRISPFDSNARRHTSFASVYAFPEIEEEDIDIKIADSDLRVDTFRSGGAGGQHVNTTDSA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VV CQ ERSQ  N+A A  +LRAKLYE E+Q+R   A+   S K EIGWG
Sbjct: 249 VRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEVQERTARASEIASEKKEIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL PY+MVKDLRT +E  +P  VLDG L++F+ A L 
Sbjct: 309 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEEFVVAYLM 351


>gi|302390246|ref|YP_003826067.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
 gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
          Length = 365

 Score =  367 bits (942), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 163/346 (47%), Positives = 229/346 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +    + D     ++ L  KT  P+ W +   A+ +++    L   +   + I+ + 
Sbjct: 16  IQEMRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKETVEKFEAIKKKW 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D + L+EL +E+ D  +  E S   +  K E E  + ++LL G  D N+A L +HAGAG
Sbjct: 76  EDLMTLIELGIEDHDEGLYGEISAEAEEFKKEFEEMRLKTLLRGRYDKNNAILSLHAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMYTRWAE + +K + L++  GEEAGIKSAT+L++GP AYG+LK EQG
Sbjct: 136 GTEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVEGPYAYGYLKSEQG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+  RRHTSF+S+ V P ++D IE+EI   D +I+T+R+ GAGGQ+VN T
Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVIPEIEDDIEVEIKPEDLKIETFRSGGAGGQYVNKT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIPTG+VV CQ ERSQ  N+  A  +LRAKL+ L L+++++  N     + EI
Sbjct: 256 ESAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQQKKINELRGEQKEI 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L 
Sbjct: 316 AWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLK 361


>gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
 gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
          Length = 334

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 162/324 (50%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   ++  M+  + L + +     ++++  +   L+E+A EE+D S++ E  
Sbjct: 1   MEEPDFWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYEENDASLILEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L       E  +  +LLSGE D NDA + +HAGAGGTES DWA ML RMYTRWA+K+ 
Sbjct: 61  ETLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+  DGEEAGIKS T  ++G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IEI E D RIDTYR+SGAGGQH+N T SAVRITH+PT +VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+  E  +       EIGWG QIRSYV+QPY MVKD RTN
Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   V+DG++D F+ A L  
Sbjct: 301 AETGNVDSVMDGNIDLFINAYLKW 324


>gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes Clip81459]
 gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
           A]
          Length = 338

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLD+F+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 336


>gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
 gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
          Length = 373

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 153/351 (43%), Positives = 228/351 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   ++ L      + + +RL+ L  +   P  + +  +++ ++ E   + N +    ++
Sbjct: 14  MKTSVDDLRDALSIEASEKRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  +   LLE+  EE+D S+  E    ++ ++  ++  Q  ++L+GE D N+A L  H
Sbjct: 74  STQYEEAETLLEMIEEENDPSLASEGEQAVEGVEKAIDELQLMTMLNGEYDHNNAILTFH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GGTE+QDWA ML RMYTRWAE   +  E L++ DG+EAGIKSA+++IKG NAYG LK
Sbjct: 134 AGTGGTEAQDWAEMLYRMYTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RR TSF+S+ V P ++D+I+IEI+ +D  +  YR+SGAGGQH
Sbjct: 194 SEHGVHRLVRISPFDANARRQTSFASLEVMPELNDNIQIEINPADIEMQVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+ H PTG+V  CQ +RSQ +N+  A  M++AKLY++ LQ+ ++  +  +  
Sbjct: 254 INKTSSAVRLIHKPTGIVTSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI WG QIRSYV  PY +VKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 314 QNEIAWGHQIRSYVFMPYTLVKDHRTNYESGNVQAVMDGDLDGFIYAYLKA 364


>gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771]
          Length = 350

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 237/329 (72%), Positives = 285/329 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S++
Sbjct: 1   MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +  T+P DVLDGDL++FM+A LA +
Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 332

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 160/325 (49%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ +   L         ++D+L D    +EL  E  D  + +E  
Sbjct: 1   MTAPDFWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDDLQKELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L +++ ++E  +   LLSG  D+N+A LE+H GAGGTE+QDW  MLLRMY RWA++  
Sbjct: 61  QKLPQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRWADQHS 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      GEEAGIKS TLLIKG NA+G+L  E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FDVETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+S+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 301 YETHDGQSVMDGDLDPFINAYLQWQ 325


>gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 332

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 213/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +   A+ L+ +   L        ++Q +  +  + LEL  EE D  +     
Sbjct: 1   MGDPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L++I+ ++   +   LLSGE DSN+A +E+H GAGGTESQDW  MLLRMY RWA+   
Sbjct: 61  ADLEQIQSQMRQYELGQLLSGEYDSNNAIVELHPGAGGTESQDWGAMLLRMYLRWADAHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   GEEAGIKS TL+IKG NAYG L+ E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FTVETEDYQAGEEAGIKSVTLMIKGHNAYGLLRSEKGVHRLVRISPFDSAGRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SI+IE+   D R+D +R+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ
Sbjct: 181 DVMPELDGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML+AKLY+ E +++ + A   +  + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD FM A L  +
Sbjct: 301 YETGNGQAVMDGDLDPFMYAYLQWQ 325


>gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 333

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 156/327 (47%), Positives = 221/327 (67%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP+ W +  +A+ ++ +   L + ++  ++++  L D     EL  EE D  +  + 
Sbjct: 1   MMTDPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +     K +++  + + LL+G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+AE++
Sbjct: 61  EEEANAFKDKLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQRYAEQQ 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E  +   G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IEIE++  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E  + + V+DG++  F++A L  +
Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLRTQ 327


>gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
          Length = 327

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI P+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis AR01/DG]
 gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
          Length = 327

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 335

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 154/324 (47%), Positives = 224/324 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   +   +RE ++L + +   + ++ +  D  I++E+  EE+D S++ E  
Sbjct: 1   MEEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      +E  + ++LLSGE D+ +A L+++AGAGGTE+ DW +ML RMY RWA+K+ 
Sbjct: 61  EMLDEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + TE L+  DG+EAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+++ D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+  E  +       +I +G QIRSYV+QPY +VKD RTN
Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + V+DGD+D F+ A L  
Sbjct: 301 AENGNVNAVMDGDIDLFISAYLKW 324


>gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
 gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
          Length = 372

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 214/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 13  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 73  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P +DD  IEIEI   D ++D YR+ GAGGQ
Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L  K
Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365


>gi|152991913|ref|YP_001357634.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
 gi|166225117|sp|A6Q718|RF2_SULNB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423774|dbj|BAF71277.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
          Length = 364

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 169/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS+++  +  +   D   +RL  +    +DP+ W +   A  + +E+   +  +      
Sbjct: 13  LSKKMENISNIVKPDELKKRLDEIEEMQQDPNFWNDTANAGKISQEKTRTERILETYHNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D + D +   E+A  E D   L+   ++ + +K      + + +LSGE DSN+A + +H
Sbjct: 73  NDAVYDAIEYFEMAKAEKDEETLEMLYEDAETLKERTNALEVQMMLSGEHDSNNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RWAE+  FK E L+   GEEAGIK  + +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFTSVMVSPEIDDDIDIEIEDKDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNK+ A  ML+++LYE E+ K++  A I    
Sbjct: 253 VNKTESAIRITHEPTGIVVQCQNDRSQHKNKSAAMKMLKSRLYEYEMAKKQ--AEIDGVE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K++IGWG QIRSYV+QPYQ VKD R+    T+   +LDGD+D  ++  L
Sbjct: 311 KSDIGWGHQIRSYVMQPYQQVKDTRSGQAFTNVDAILDGDIDKLLEGVL 359


>gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1]
 gi|122277196|sp|Q04GC3|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni
           PSU-1]
          Length = 372

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 214/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 13  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 73  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P +DD  IEIEI   D ++D YR+ GAGGQ
Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L  K
Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365


>gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 369

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 221/354 (62%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L++ L+ +  + D     +++  L T+   P LW +   A+ +      L +++  ++ 
Sbjct: 12  QLNKSLSSIEAVVDVPAKNKQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   LLELA EE D    QE    +  +  E++  + ++LLSGE D  DA + +
Sbjct: 72  LRSRLDDASTLLELASEESDADTAQEAEKEIATLADEIDTLEVQTLLSGEYDERDALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            + AGG ++ D+A MLLRMY RWAE+  +  E  +I   EEAGIKSAT  +K P AYG L
Sbjct: 132 RSEAGGVDAADFAAMLLRMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  I+I E D R+D + ASG GGQ
Sbjct: 192 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA    +L+AKL  LE  ++E  A +   
Sbjct: 252 GVNTTDSAVRITHLPTGIVVTCQNERSQIQNKAAGLRVLQAKL--LERARQEREAEMDAL 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+RSYVL PYQMVKDLRT  E  SP +V DGD+D F++  +  ++
Sbjct: 310 KSDGNSWGSQMRSYVLHPYQMVKDLRTGFESGSPDNVFDGDIDGFIERGIRWRR 363


>gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
 gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
          Length = 378

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 214/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 19  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 79  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 138

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 139 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 198

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P +DD  IEIEI   D ++D YR+ GAGGQ
Sbjct: 199 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 258

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 259 NVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 318

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L  K
Sbjct: 319 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 371


>gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226739123|sp|B7J4M2|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 365

 Score =  366 bits (940), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D +    RL  +  + EDP +W N  +A+ L RER  L+  I+ + ++
Sbjct: 14  LQVRVAGLRGYLDLEEKRGRLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   +LELAL E D  +L     +L      VE  +F+ + SG  D+ + ++++ 
Sbjct: 74  TASLADGGEMLELALSEQDAELLAAVDADLDTALSLVEKLEFQRMFSGAQDAANCFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA M+LRMY  WAE   F  E +E+ +GE AGIKSA++ ++G +A+GWL+
Sbjct: 134 AGAGGTEAQDWAEMILRMYLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP +DDS E++I+ +D ++DTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEVDINPADLKVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH+P+G+VV CQ +RSQHKN+A+A  MLR+KLYE+E+QKR       E S
Sbjct: 254 VNKTDSAIRITHVPSGIVVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDS 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E      VLDG LD F++A L  
Sbjct: 314 KSDIGWGHQIRSYVL-DQSRIKDLRTGVEVGDTQKVLDGALDMFIEAALKA 363


>gi|224503251|ref|ZP_03671558.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561]
          Length = 338

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 220/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
          Length = 327

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 164/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L   +   +++ +   +  +  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK +
Sbjct: 65  SLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVD 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D IEIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDDIEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   N     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
 gi|166225114|sp|A6Q582|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
          Length = 368

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 233/353 (66%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL +++  +  +   D   +RL  +      P  W +  +A  + +E+  L   +   +E
Sbjct: 12  KLEQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D   L E+A EE+D   L    +    ++ +V   + E++LSGE D  +A + +
Sbjct: 72  ARSSVEDAKDLFEMATEEEDTETLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAIVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+  FK E L+  +GEEAGIK  + +IKG NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN+RRHTSF+S+ V P VDD I I I + D R+DTYRASGAGGQ
Sbjct: 192 KAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDINIVIEDKDIRVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITHIPTG+VVQCQ +RSQHKN+A A  ML+++LYELEL+K+         
Sbjct: 252 HVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQE--GI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K++IGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  +
Sbjct: 310 EKSDIGWGHQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVLIAE 362


>gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
          Length = 331

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 165/323 (51%), Positives = 234/323 (72%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            EDP +W +   A+ L RER+ L+  +  ++ +   L D+  L E++ EE D +  +   
Sbjct: 7   LEDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGDDATCEAIE 66

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++++   EVE  +F  + S   D ++ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ 
Sbjct: 67  ADVEKSADEVEALEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKG 126

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E  +G+ AGI+SAT+ ++G  AYG L+ E GVHRLVR SP+DS+  RHTSF+S+
Sbjct: 127 FKTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSSGGRHTSFASV 186

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP VDDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQ
Sbjct: 187 FVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQ 246

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN+A+AW MLR++LYE E++KR       ES+K+++GWG QIRSYVL     +KDLRTN
Sbjct: 247 HKNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWGHQIRSYVL-DQSRIKDLRTN 305

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           +E ++   VLDGDLD+F+ A+L 
Sbjct: 306 VEISNTQKVLDGDLDEFITASLK 328


>gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
          Length = 339

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 155/324 (47%), Positives = 219/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W    ++  ++RE ++L + +   + ++ +  D  +++++  EE+D S++ E  
Sbjct: 1   MEEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L++ K  +E  + + LLSGE DSN+A L ++AGAGGTES DW ++L RMY RWAE + 
Sbjct: 61  EMLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   L+  DGEEAGIKS T+ I G NAYG+L+ E GVHRLVRISP++S  +R TSF S 
Sbjct: 121 FKAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ I+IE++  D R+DTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ
Sbjct: 181 DVMPNIEEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKL  ++ +++   A        +IGWG QIRSYVLQPY MVKD RT 
Sbjct: 241 FQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG +D+F+ A L  
Sbjct: 301 EESGNVDAVLDGAIDNFISAYLRW 324


>gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
 gi|149834234|gb|EDM89314.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
          Length = 335

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 216/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W N   ++  M+E + + + +     ++ ++ D   ++E+  EE+D  I+ E  
Sbjct: 1   MEAPDFWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYEENDPEIIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +   +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML RMY+RW +++ 
Sbjct: 61  EMLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAG+KS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ Q+ E   +      T+IGWG QIRSYV+QPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDGD+D F+ A L  
Sbjct: 301 EETGNVDAVLDGDIDPFINAYLKW 324


>gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
 gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
          Length = 378

 Score =  366 bits (939), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 219/357 (61%), Gaps = 3/357 (0%)

Query: 2   KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           +LS +   L  L    D D   +R+  L+   E+P  W +  +A  L  E +HL + +  
Sbjct: 10  ELSSKEEPLQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEARHLKDELEG 69

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
              ++    D   L+++  EE+D S++ E  + L      ++      LLSGE DS +  
Sbjct: 70  FTALKGNYEDIEALIQMGKEENDDSVIPEIRELLDSFSERLDQMNTTLLLSGEYDSMNVI 129

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L ++AGAGGTE+ DWA +L RMYTRWAE+  F  + L+  DG+EAGIKS T+ + G  AY
Sbjct: 130 LRLNAGAGGTEANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKSVTMEVVGEYAY 189

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+L+ E G+HRLVRISP+++  +R TSF S  V P ++  I+IEI E D +++ +RASGA
Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEIREEDIKMEVFRASGA 249

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N T SAVR+ HIPTG V  CQ+ERSQ +NK +A  ML+ KLY  E +++E     
Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAG 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 + GWG QIRSYVLQPY+MVKDLRT  E  +   VLDGD+D F+ A L   +
Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRFISAYLKWMQ 366


>gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761334|ref|ZP_04759422.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374241|gb|EER63738.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 375

 Score =  366 bits (939), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 206/352 (58%), Positives = 266/352 (75%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   L  L    DWD A++RL  LN + EDP LW +   A+ +MRER  LD +I+  + I
Sbjct: 12  IQESLALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESIAATRAI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L +N+ L+E+A  E +  ++Q+    L+ +    +  + ++LLSGEAD ND Y+EV+
Sbjct: 72  ATELQENIELIEMAEAEGEEEMVQDAISALESLAERADRDKVKALLSGEADGNDTYIEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA ML RMY RWAE++ FK E ++ H GE+AGIKSATLL+KG +AYG+ K
Sbjct: 132 AGAGGTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGESAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+ VYPVVDD I+IE+ + D +IDTYR+SGAGGQH
Sbjct: 192 TENGVHRLVRISPFDSNARRHTSFASVAVYPVVDDDIDIEVLDKDLKIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ +RSQHKN+A+A   L+A+LYE ELQ RE  A+ G ++
Sbjct: 252 VNTTDSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAEASAGYAA 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVLQPYQ+VKDLRT I  T+P+DVLDG+LD F+ A LA +
Sbjct: 312 KSEIGWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALAQR 363


>gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus
           GD/7]
          Length = 336

 Score =  366 bits (939), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 220/325 (67%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
             E+P  W N  +A   M+E ++L + +     ++    D   LLE+  EE+D S++ E 
Sbjct: 1   MMEEPGFWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYEENDASLIPEV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + +   +   E+ + ++LLS E D ++A + +HAGAGGTE+ DW +ML RMYTRWAEK 
Sbjct: 61  QEAMADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRWAEKH 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F T  L+  DGEEAGIKS T+ I G NAYG++K E+G+HRLVRISP+++  +R TSF+S
Sbjct: 121 GFTTTVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PT +VVQCQ ERS
Sbjct: 181 CDVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH NK +A  ML+AKLY L+ Q+ +E  +       +  WG QIRSYV+QPY++VKD RT
Sbjct: 241 QHMNKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAWGSQIRSYVMQPYKLVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
             E ++   V+DGD+D F+ A L  
Sbjct: 301 GAESSNVDAVMDGDIDLFINAYLKW 325


>gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 352

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 152/338 (44%), Positives = 221/338 (65%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R+  L+ +  DP  W +   A+ + +E   L   +   + + +++ D    LELA+
Sbjct: 3   RKEERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAM 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE D S+  +     + +  EVE ++   LLSGE D  +A +  HAGAGGTE+QDW  ML
Sbjct: 63  EEKDTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMYTRWAE+  +    +++  G+EAG+KSAT  + G  AYG+LK E+GVHRLVRISP+D
Sbjct: 123 IRMYTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFD 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           + +RRHTSF+++ V P + D ++++I+  + R+D +RASGAGGQHVN T SAVR+TH+PT
Sbjct: 183 AAARRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQ +NK      LRAKL+ELE +K+ ++      +   I WG QIRSYV 
Sbjct: 243 GIVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVF 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            PY +VKD RT++E  +   V+DG+LD F++  L  +K
Sbjct: 303 HPYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREK 340


>gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818]
 gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818]
          Length = 338

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 220/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
 gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
          Length = 326

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMSAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
 gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
          Length = 338

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 157/324 (48%), Positives = 219/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ED   W + + ++  M+  + + + ++  +++  +  D   L+E+  EE+D S++ E  
Sbjct: 1   MEDGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYEENDASLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L       +  + ++LLSGE D ++A L +HAGAGGTES DWA ML RMY++WA+ R 
Sbjct: 61  EMLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKWADSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++   L+  DG+EAGIKS T  I G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+NK +A  ML+AKLY L+ Q+  E A       TEIGWG QIRSYV+QPY MVKD RT 
Sbjct: 241 HQNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DG +D F+   L  
Sbjct: 301 VETGNVDSVMDGKIDLFINGYLKW 324


>gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
 gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
          Length = 335

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 174/333 (52%), Positives = 234/333 (70%), Gaps = 1/333 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL  +N + E P +W    +A+ L +ER  L+  +  IK++   L D   LLELA+E +
Sbjct: 2   ERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEGE 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRM
Sbjct: 62  DQETFDEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRM 121

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+
Sbjct: 122 YLRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNN 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF++ +VYP +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+V
Sbjct: 182 RRHTSFAAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ +RSQHKNK Q    L+AKLYE+ELQK+       E SK++IGWG QIRSYVL   
Sbjct: 242 VQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDS 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 302 -RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 333


>gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
 gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
          Length = 372

 Score =  365 bits (938), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 233/342 (68%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD D   + L  LN + EDP LW    EA+ LM+E+  ++  +       + L D L
Sbjct: 23  GGHFDVDAREEELRELNARIEDPTLWDRPEEAQKLMQEKTRIERTLQTFHNSTEALDDAL 82

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+  EE D     E  + L  ++ E+E  +   +L GE D+  A+L+++AG+GGTE+
Sbjct: 83  TLFEMGAEESDPDTQMEAVETLDSVQAELEALELARMLGGETDAESAFLDINAGSGGTEA 142

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE++ FKTE +E   GEEAGIKSAT+ IKG  AYG+LK E GVHRL
Sbjct: 143 QDWAEMLLRMYLRWAERKGFKTELMECTAGEEAGIKSATVSIKGEYAYGFLKAEVGVHRL 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SPYDS +RRHTSF+S++ YP ++  IEI+I  SD R DTYRASGAGGQH+N TDSAV
Sbjct: 203 VRKSPYDSGNRRHTSFASVFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PT +VVQCQ +RSQHKN+A AW+ML+A+LYE EL  R       E  KT+IGWG 
Sbjct: 263 RLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKARLYEHELNLRNAEKQEIEDGKTDIGWGH 322

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +    LDGD+D F++A L 
Sbjct: 323 QIRSYVL-DQSRIKDLRTGMETGNTQAFLDGDIDAFIQAELM 363


>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
 gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
           prevotii DSM 20548]
          Length = 367

 Score =  365 bits (938), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 234/354 (66%), Gaps = 2/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++L  +G   D  +  + +  L  ++  P  W +  +A+ +M +     + +S  K++
Sbjct: 14  LSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADLASKKDELSDYKKL 73

Query: 63  QDRLCDNLILLELAL--EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ L DN  +L+L    EE +   ++E  D+L+ +       +  + L GE D N+AY+ 
Sbjct: 74  ENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQLDGEYDKNNAYIS 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGG E+ DWA+ML RMY R+ +   FK E  ++++ E  GIKSAT+ + GP AYG+
Sbjct: 134 INAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKSATMHVTGPYAYGY 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+DS SRRHTSF+S+ V+P +D++IE++I  SD RIDTYRASGAGG
Sbjct: 194 LKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPELDENIELDIDPSDLRIDTYRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSAVRITHIPTGVV   Q ERSQ +N+  A N+L++KL +++ +++ E     +
Sbjct: 254 QHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQIKEEEQREKIEDIQ 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            S ++I WG QIRSYV QPY +VKD RT  E  +   V+DGD+  F+ A LA K
Sbjct: 314 GSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGFIDAFLADK 367


>gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
 gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
          Length = 327

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W +  +A+ ++ E   L + ++   E+ +   +  +  +L  E+ D  +  E  
Sbjct: 1   MSEADFWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKEDYDEELHVELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITHIPT VVV CQ ERSQ
Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDLDSFIDAYLRSK 325


>gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
 gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
          Length = 380

 Score =  365 bits (937), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 222/354 (62%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L   L+ +    D     + +  L+ + E+P  W N  +A    ++ +++ + ++ I+ 
Sbjct: 13  NLKGTLDEVTASLDLGTKKKIIEELSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIER 72

Query: 62  IQDRLCDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           +  +  D + L+++   E  DD  +  E    L   + ++E  +  +LL+   D  D  L
Sbjct: 73  LNSQYTDIIDLIDMQNAEGVDDDDMAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVIL 132

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGTE+ DWA+ML RMYTRWAE++ F TE L++ DG+EAGIKS T  I G NAYG
Sbjct: 133 RLNAGAGGTEACDWASMLYRMYTRWAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYG 192

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHRLVRISP+++ ++R TSF S  V P +++ ++IEI+  D RIDTYR+SGAG
Sbjct: 193 LLKSEHGVHRLVRISPFNAQAKRQTSFVSCDVMPDIEEDLDIEINPDDLRIDTYRSSGAG 252

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T SAVRITHIPTGVVV CQ ERSQ +NK +A  ML+AKL+ ++ +++       
Sbjct: 253 GQHINKTSSAVRITHIPTGVVVACQNERSQFQNKDKAMQMLKAKLFIMKQEEQAAKLAGI 312

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                +  WG QIRSYVLQPY MV D RT  + ++   VLDG+LD F+ A L  
Sbjct: 313 RGEVMDNAWGSQIRSYVLQPYTMVNDTRTGFKASNADGVLDGELDPFINAYLKW 366


>gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
 gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
          Length = 367

 Score =  365 bits (937), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 247/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS + N L    D+D   +RL+ +    EDP +WQ+   A+ L RER+ L++ +  + +I
Sbjct: 16  LSLRSNELRRYLDYDTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  L D   L E++ EE+D + L  T+ ++  I+  V   +F  + +   D N  ++++ 
Sbjct: 76  QQDLTDAAELFEMSQEENDEASLMSTAADIDDIERRVAEMEFRRMFNHPMDPNSCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY R+AE++ ++ E LEI DG+ AGIK A++ + G  A+G L+
Sbjct: 136 AGSGGTEAQDWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPT +VVQCQ +RSQH+N+A+A  ML++++YE EL+KR E     E  
Sbjct: 256 INKTDSAVRITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT+IGWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L 
Sbjct: 316 KTDIGWGHQIRSYVL-DQSRIKDLRTNHEVGNTQGVLDGDLDDFISASLK 364


>gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 372

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 172/349 (49%), Positives = 236/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +G LFD D     L  L T+T  P  WQ++  ++ ++++ + + + I   +++ 
Sbjct: 15  EEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL++EE +  + +E    L  ++ +++  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDTYR+SGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
 gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
          Length = 375

 Score =  365 bits (936), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 192/354 (54%), Positives = 252/354 (71%), Gaps = 1/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ + L+ L    +WD A  RL   N + EDP LW +   A+ LMR+RQ L +AI+  +
Sbjct: 10  VEIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYE 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+  L D++ L+E+   EDD  I+ E  + L+ +  +   K+ E+LL+GEAD+ND +LE
Sbjct: 70  VIKQELSDHIELIEMGEMEDDSDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLE 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +++GAGGTE+ DWA ML RMY RWAE++ +K +      GEE GIKSA+  I G NAYGW
Sbjct: 130 INSGAGGTEACDWAAMLARMYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGW 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N   
Sbjct: 250 QHVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVH 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+ 
Sbjct: 309 ENAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362


>gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
 gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
          Length = 381

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   ++ + G  D D+  ++++     T  P  W +  +A  +M + + L   I   ++
Sbjct: 15  QLKADVSAVWGRLDVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKGRIEPWQD 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D   L EL LEE+D SI  E  +  ++ K + E++   +LLS E D ND +L V
Sbjct: 75  LVQRVDDLEALYELGLEENDKSIESELKEQYEKAKADYEHQSILNLLSDEVDKNDCFLSV 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+ DW  ML RMY RWAE+  +K E L   + E  G+KS  + I GP  YG+ 
Sbjct: 135 HAGAGGTEACDWTFMLSRMYQRWAERHGYKVEVLSQEEAE-GGLKSINMKISGPYVYGYT 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N+RRHTSF+S++V+PV+DDSIE+ I   D R+DTYR+ G GGQ
Sbjct: 194 KGEAGVHRLVRISPFDANARRHTSFASVYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR THIPTG+VV C  ERSQ  N+A A ++L+++LYE   ++RE+  +    
Sbjct: 254 HVNKTESAVRFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYKEEREKENSKFAG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I +G QIRSYV QPY MVKD RT     +   V+DGD+D F+   L+ K
Sbjct: 314 EKKDISFGSQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDEFLSAK 366


>gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13]
 gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13]
          Length = 351

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 168/342 (49%), Positives = 239/342 (69%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G +FD DN  ++L  L  + EDP +W++   ++ + +E++ L++ I   +++   + +N 
Sbjct: 8   GAIFDLDNKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNK 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L +LA EE D S L +   +   +  ++   +F+ + S   D N+ +++  +G+GGTE+
Sbjct: 68  ELFDLAFEESDDSTLNDLFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANMLLRMY R+ E++ FK E +EI +GE AGIK AT+ I G  AYG+ + E G+HRL
Sbjct: 128 QDWANMLLRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS SRRHTSF+ + VYP +D+S+EI+I+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 188 VRKSPFDSGSRRHTSFAGVNVYPEIDESVEIDINPADLRIDTYRASGAGGQHINKTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVVQCQ +RSQH+NKAQA +ML+A+LY +EL KR E     E +K++IGWG 
Sbjct: 248 RITHEPSGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWGH 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +   VLDG+LD F+  +L 
Sbjct: 308 QIRSYVL-DQSRIKDLRTGVEVGNTQGVLDGNLDPFITESLK 348


>gi|295401151|ref|ZP_06811124.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976744|gb|EFG52349.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 327

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 173/325 (53%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L + +   + +++R  +  +  EL  EE D  + QE  
Sbjct: 1   MAAPDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYELIKEEPDEDLQQELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +R+  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  TEAKRLTKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIEI   + RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 EVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ +L++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKALNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDIFIDAYLRSK 325


>gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1]
 gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1]
 gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 326

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 166/321 (51%), Positives = 215/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIEI   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|191637822|ref|YP_001986988.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
 gi|190712124|emb|CAQ66130.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
          Length = 332

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++     L         +++ L D     EL  +E D  + QE  
Sbjct: 1   MAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAGFELLQDEPDKDLQQEEE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA++  
Sbjct: 61  AKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+SIE+++   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q +RSQ
Sbjct: 181 DVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  ML+AKLY+ E + +   A   +  + ++ +G QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + + V+DGDL+ F+ A L  +
Sbjct: 301 YETGNGNAVMDGDLNPFINAYLQWE 325


>gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
          Length = 367

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 219/353 (62%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE D S+     D L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I ++D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E+       
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEEQAELDALG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +  +
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359


>gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
 gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
          Length = 379

 Score =  364 bits (935), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 161/350 (46%), Positives = 234/350 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D ++  Q++  LN + E P  W +   +   M+E + L + +    +++
Sbjct: 16  KEPLAEVTRALDLESKHQKIEELNREMEAPDFWNDADLSARKMKELKSLKDDVEIADKLK 75

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + + +  +L+++A EEDD  ++ E    + ++K + E  + ++LLSGE D+N+A + +HA
Sbjct: 76  NSIEEIGMLMDMANEEDDADMVGEIRLMMDQMKEDFERVRIKTLLSGEFDANNAIVTLHA 135

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMYTRWA  + F+ E L+  DG+EAGIK+ T  + G NAYG+LK 
Sbjct: 136 GAGGTEACDWTAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQVNGENAYGYLKS 195

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++N +R TSFSS  V P ++  +++E+ + D RIDTYR+SGAGGQH+
Sbjct: 196 EKGVHRLVRISPFNANGKRQTSFSSCDVMPELEQDLDVEVKDEDIRIDTYRSSGAGGQHI 255

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH PTG+VVQCQ ERSQH NK +A  ML+AKLY L++++++  A       
Sbjct: 256 NKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIRGEV 315

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T+I WG QIRSYV QPY MVKDLRT  E  + S V+DGD++ F+ A L  
Sbjct: 316 TDIAWGNQIRSYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYLRW 365


>gi|116051698|ref|YP_789463.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 332

 Score =  364 bits (935), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 180/328 (54%), Positives = 240/328 (73%), Gaps = 1/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            +N + EDP++W N   A+ L RER  L   +  + ++   L D+  LL++A+EEDD   
Sbjct: 3   EVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGA 62

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           + + ++ ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RW
Sbjct: 63  VDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 122

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+K  F    +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 123 ADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ
Sbjct: 183 SFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL     +K
Sbjct: 243 NERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVL-DQSRIK 301

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           DLRT IE++    VLDGDLD++++A+L 
Sbjct: 302 DLRTGIERSDCDKVLDGDLDEYLEASLK 329


>gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
 gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
          Length = 327

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 164/321 (51%), Positives = 215/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  SLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
          Length = 330

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 221/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016]
 gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
 gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           reuteri DSM 20016]
 gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
          Length = 332

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L         ++D++ D    LEL   E D  + +E  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAVEPDDDLQKEFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +    +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  
Sbjct: 61  ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325


>gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11]
 gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 331

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F+++ L 
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325


>gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG]
          Length = 332

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++     L         +++ L D    LEL  +E D  + +E  
Sbjct: 1   MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQREEE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA++  
Sbjct: 61  TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q +RSQ
Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  ML+AKLY+ E + ++  A   +  + ++ +G QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDL+ F+ A L  +
Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325


>gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
 gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
          Length = 355

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++ ++ L   GG FD +   + +  L+ + EDP  W +   ++ + +E++ L++ +    
Sbjct: 2   LESTKNLIPCGGFFDLEEKKRTIKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQAD 61

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +   L DN  L ++A+EE+D + L     + ++++  V+  +F+ + S   D N+ +++
Sbjct: 62  SLISDLADNQELFDMAVEENDLNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVD 121

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
             +G+GGTE+QDWANML RMYTR+AE++ FK E LE  +GE AGIK ATL I G  A+G+
Sbjct: 122 FQSGSGGTEAQDWANMLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGF 181

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DS SRRHTSF+ + VYP +D+SI+I+I+ SD RIDTYRASGAGG
Sbjct: 182 LRTESGIHRLVRKSPFDSGSRRHTSFAGVNVYPEIDESIDIDINPSDLRIDTYRASGAGG 241

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N TDSAVRITH+PT  VVQCQ +RSQH+NKAQA NML+A+LY +EL KR E     E
Sbjct: 242 QHINKTDSAVRITHVPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAME 301

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +KT+IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F+  +L 
Sbjct: 302 DAKTDIGWGHQIRSYVL-DQSRIKDLRTNLEVGNTQGVLDGDLDMFISESLK 352


>gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
 gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 330

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 215/324 (66%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++  
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ 
Sbjct: 61  QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N E      V+DGD+  F+++ L 
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLR 324


>gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
 gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
          Length = 326

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 163/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMSAGFWDDQQGAQTVINEANALKDMVGSFRQLDETFENLEMTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus
           rhamnosus Lc 705]
 gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705]
          Length = 332

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++     L         +++ L D    LEL  +E D  +  E  
Sbjct: 1   MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQHEEE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA++  
Sbjct: 61  TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q +RSQ
Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  ML+AKLY+ E + ++  A   +  + ++ +G QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDL+ F+ A L  +
Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325


>gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 331

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F+++ L 
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325


>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
 gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 343

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 164/336 (48%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + +S    K  +P+ W N  +A++++ E   L       K + D + +  +  EL   
Sbjct: 1   MNESISVNEAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEM 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           EDD  +  E    L      ++  +   LL+G+ D+N+A +E+H GAGGTESQDW +MLL
Sbjct: 61  EDDPDVQSEFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+ +FK +  +   GE AGI S T+ I G NAYG+L+ E+GVHRLVR+SP+DS
Sbjct: 121 RMYTRWAEQHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DDS+E+ I++ D R+D YR+SGAGGQH+N T SAVRITH+PTG
Sbjct: 181 AGRRHTSFASVDVMPELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV  Q ERSQ +N+A A +ML+AKL+ELE QK+ E     E  + EIGWG QIRSYV  
Sbjct: 241 IVVASQAERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD R+N E  +   V+DGD DDF+ A L  K
Sbjct: 301 PYSMVKDHRSNFETANVQGVMDGDFDDFINAYLQWK 336


>gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 330

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 215/324 (66%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++  
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ 
Sbjct: 61  QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N E      V+DGD+  F+++ L 
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLR 324


>gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 326

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 164/321 (51%), Positives = 216/321 (67%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A++++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQVVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
          Length = 358

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 175/347 (50%), Positives = 228/347 (65%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG F+ +    RLS ++        W +   A  + +E+  L + +     +++  
Sbjct: 1   MKTYGGHFEVERKSARLSEISDMEAMEGFWDDSDNAAKVQKEKSVLSDVVETYTTLKELF 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +L+E A  E+D     E  D   +   +    + + LLSGE D N+A + ++AGAG
Sbjct: 61  DEFEVLVEFANGEEDEDSALEAIDCYDKFLKQFNAAELKVLLSGEVDPNNAIVSINAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+ML RM  RWAE + FK + L++ DG+ AGIKSAT+ I G  AYG+LK E G
Sbjct: 121 GTESCDWASMLFRMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN+RRHTSFSSI+V P +DD+IEIEI + D +ID YR+ GAGGQ VNTT
Sbjct: 181 VHRLVRISPFDSNARRHTSFSSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT  VV CQ ERSQ +NK QA  +LR++LYELE++KR       E+SK EI
Sbjct: 241 DSAVRITHIPTNTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL PY++VKD RT+ E  +   VLDGDLD FM A L  
Sbjct: 301 GWGAQIRSYVLHPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFLRW 347


>gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
 gi|254790911|sp|B8G607|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
          Length = 367

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 219/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L G  D       +  L  +  DP LW     A+ LM+    L   ++   ++
Sbjct: 12  IRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+     L+ELA +E D S+  + +  L+ ++ EV  ++ E LLSG  D  DA+L + 
Sbjct: 72  DHRMTSLAELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQ 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GGT++QDWA MLLRMYTRWAE+R +    +++ +GEEAGIKSAT+ I+GP AYG+ +
Sbjct: 132 AGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYAR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRL+R+SP+++   R TSF+ + V P VDD+ E+EI   D RID +R+ G GGQ 
Sbjct: 192 AEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L E ELQ++ E        
Sbjct: 252 VNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             E  +G Q+R+Y L P  +VKD RT+ E ++   VLDG++D F++A L  
Sbjct: 312 YREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLRA 362


>gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 334

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 156/326 (47%), Positives = 220/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ ++ +   L + ++  + ++  L D      L LEEDD ++ Q+  
Sbjct: 1   MTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++Q  K E++  + + LL G  D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ 
Sbjct: 61  QSVQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P  +++ IEI+I+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A   L++KLY+L+++++E+        + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHPYAMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DGD+  F++A L  +
Sbjct: 301 NEETGKVDAVMDGDIGPFIEAFLRSQ 326


>gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
 gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
          Length = 320

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 176/318 (55%), Positives = 227/318 (71%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W    +A+ L +ER  L+  +  I +++  L D   LL+LA+E DD     E    L+ +
Sbjct: 2   WNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADDEETFNEAVAELEGL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             ++E  +F  + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +
Sbjct: 62  NKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP V
Sbjct: 122 EESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK Q
Sbjct: 182 DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   ++AKLYELE+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDKFIEASLKA 318


>gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 330

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 161/325 (49%), Positives = 221/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL L+E D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLDEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
 gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
          Length = 370

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 212/353 (60%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D    R+  L  +  DP LW +   A+ +          +  I  
Sbjct: 11  ELDATLTTIEKVVDVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE D   ++        ++  +E  +  ++LSG  D  +A + +
Sbjct: 71  LRGRLDDLSVMYELAEEESDSDAVEMADAERAELRAAIESLEVTTMLSGPYDEREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWA+K   K E  +    EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  I+I ESD RID YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEETDHIDIPESDLRIDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQH+NKA A  +L+AKL E +  + E        
Sbjct: 251 SVNTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKR-QEERAELDALG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRT  E  +P  VLDGDLD F++A +  +
Sbjct: 310 AGGNASWGNQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGIRWR 362


>gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
 gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
          Length = 327

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E             + + L +  +++++  EE D  + +E  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVDMLQEEPDAVMQEEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +  ++   +   LL G  D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  TRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV  Q +RSQ
Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DGDLD F+   L +
Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324


>gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41]
 gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus
           C3-41]
          Length = 328

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 172/326 (52%), Positives = 224/326 (68%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W +   A++++ E   L   ++  KE+++   +  + LEL  EE D  + +E 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEETHENLDMTLELLREEPDEELQEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR
Sbjct: 61  GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P  D++IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS
Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ +A  ML+ KLY+LEL+K++   +     + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E  +   V+DGDLD F+ A L  K
Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326


>gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
 gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
          Length = 326

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 163/321 (50%), Positives = 215/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 367

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 239/353 (67%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  + D D   + L  ++        W +  +AK ++++R+ L+  ++ I+ 
Sbjct: 10  ELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEETVNSIET 69

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L +   EE D        + ++ ++ +++  + ++ LSGE DS +AYL +
Sbjct: 70  LEKSLRDVEELSQTTPEE-DTDTWAILEEEMESLEDKLKELELKTYLSGEMDSKNAYLTI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWA+ML RMY RWAE++ +  E ++I   + AGIKS TLL+KGP AYG+L
Sbjct: 129 QAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVKGPYAYGYL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GEQGVHRLVRISP+DSN+RRHTSF+++ V P +D+ I IE+ + D +I+T+RASGAGGQ
Sbjct: 189 RGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQIDEDINIEVRDEDLKIETFRASGAGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TD+AVR+THIPTG+VV CQQERSQ +N+ +A  +L+AKLY+LE QK  E     E 
Sbjct: 249 YVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKLMEKRKQYEG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KT+IGWG QIRSYV  PY++VKDLRT  E  +   V+DGD+D F++  L  +
Sbjct: 309 EKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFLKWQ 361


>gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
 gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
          Length = 338

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 163/335 (48%), Positives = 224/335 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    K  +P  W +   A+ ++ E             + + L +  +++E+  E
Sbjct: 1   MEEDIAEAEAKMAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D ++ +E    +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +MLL
Sbjct: 61  EPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+  ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF S+ V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PTG
Sbjct: 181 AKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
            VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  
Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           PY MVKD RTN+E  +   V+DGDLD F+   L +
Sbjct: 301 PYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 335


>gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           obeum A2-162]
          Length = 334

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 151/324 (46%), Positives = 216/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +   ++  M+E + + + +     ++ ++ D   ++E+  EE+D  I+ E  
Sbjct: 1   MEAPDFWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYEENDPEIIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +   +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML RMY+RW +++ 
Sbjct: 61  EMLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKL+ L+ Q+ E   +      T+IGWG QIRSYV+QPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG++D F+ A L  
Sbjct: 301 EETGNVDAVLDGEIDPFINAYLKW 324


>gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 372

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 168/349 (48%), Positives = 232/349 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L  L  +T  P  WQ++  ++ ++++ + + + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL++EE +  + +E    L  ++ +++  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDTYR+SGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
 gi|189039998|sp|A9NF23|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
          Length = 365

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 165/351 (47%), Positives = 221/351 (62%), Gaps = 2/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++  L    D D    RL  +     +P+ W +  +AK + +E   L      I  IQ
Sbjct: 14  ETKIKDLENALDLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTITSIQ 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           ++  D L+ LE A E             +  ++ ++   + E LL+GE D N+A LE+H 
Sbjct: 74  NQYEDALMWLEEAKEG--TESWDILEAEIDSLQKKISEFEIEVLLNGEYDHNNAILELHP 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DW  +L+RMY R+A  + +K E L    GEEAG+KS TL I GP AYG LK 
Sbjct: 132 GAGGTESMDWCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYGNLKS 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DSN RRHTSF S  V P +D++ E+E+ + D R+DT+++SGAGGQ V
Sbjct: 192 ERGVHRLVRISPFDSNKRRHTSFVSCDVAPEIDETSEVELKDDDIRMDTFQSSGAGGQSV 251

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVR+THIPTG+VV  Q ERSQ KNK  A  +L++KL + EL++++   N  +  K
Sbjct: 252 NTTYSAVRLTHIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNALKGEK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++IGWG QIRSYV QPYQMVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 312 SDIGWGSQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKSK 362


>gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579]
 gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
           ATCC 14579]
          Length = 325

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 215/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 64  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 347

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 151/340 (44%), Positives = 219/340 (64%), Gaps = 1/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD     + L  L  K ++P  W +  +A+ + ++ + + + I    +++ +L D  +L
Sbjct: 6   HFDRAGLEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQLDDIDVL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            ++ +EEDD     E    ++ I+ E+E    + LLSGE D N+A + +H G GGT++ D
Sbjct: 66  KDI-MEEDDIESANEIIQTIKSIEHEIEDYNMKILLSGEYDKNNAIVTLHVGVGGTDAND 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  MLLRMYTRW E + +  E +++  G+EAGIKS TL + G   YG+LK E+G+HRLVR
Sbjct: 125 WTEMLLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEKGIHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISPY++N +R TSF+S+ V P +    +I I   D ++DTYR+SG+GGQH+N TDSAVRI
Sbjct: 185 ISPYNANGKRQTSFASMEVLPELTKEQDITIRPDDLKVDTYRSSGSGGQHINKTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E          ++GWG QI
Sbjct: 245 THIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYV  PY MVKD RTN+E ++ + V+DGD+D F+ A L 
Sbjct: 305 RSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFLK 344


>gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234]
 gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii
           NGR234]
          Length = 342

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 230/329 (69%), Positives = 281/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD++I+ ++  + +L DN+ L+EL  EE D +I+
Sbjct: 1   MNNKAEDPTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L++++ E   KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMY+RWA
Sbjct: 61  TEAEEALRQLRNEASKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +E TSP DVLDG+L++FM+A LA +
Sbjct: 301 LRTGVESTSPGDVLDGELNEFMEAALAHR 329


>gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
 gi|166977374|sp|A8F531|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
          Length = 367

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 174/350 (49%), Positives = 235/350 (67%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +      L D D     L  + ++  DP +W++  +A  + ++ + +   +S I E
Sbjct: 12  ELREKYLNFVKLIDPDKLNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D  + +EL+  E+D  I Q+    +Q ++  +   Q E +L+   D N+AYL +
Sbjct: 72  IERNFEDIDVGIELS--EEDPGIAQDIEKIVQEVEKNIRRFQLELILNDPLDQNNAYLSI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA MLLRMY RWAE++ F  E L+   GEEAG+KSAT+L+KG  AYG+L
Sbjct: 130 HPGAGGTESHDWAQMLLRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+  RRHTSF+S+ V P + D I++EI   D RIDT+RASG GGQ
Sbjct: 190 KHERGVHRLVRISPFDAAKRRHTSFASVNVVPEISDDIDVEIKPEDIRIDTFRASGHGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TDSAVRITH+PTG+VV CQ ERSQH+NKA A  +L+AKLY+LEL KR E  +  + 
Sbjct: 250 YVNRTDSAVRITHLPTGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              EI WG QIRSY+LQPY +VKD RT+IE  +   VLDG+LD F++A L
Sbjct: 310 ELKEISWGNQIRSYILQPYTLVKDHRTDIETGNFDAVLDGELDQFIEAEL 359


>gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale M104/1]
          Length = 330

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E  
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA+ML RMY++WA+K+ 
Sbjct: 61  QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ ++             EIGWG QIRSYVLQPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDG++D F+   L  
Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324


>gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L]
 gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al
           Hakam]
 gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus anthracis CI]
 gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L]
 gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus
           thuringiensis str. Al Hakam]
 gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
           str. CI]
          Length = 326

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 215/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
 gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
          Length = 375

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 200/354 (56%), Positives = 262/354 (74%), Gaps = 1/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ + L  L    DWD A  R+   +  +E+P LW N  +A+ LMRERQ L ++IS  K
Sbjct: 10  VEIHKSLELLKQRMDWDTAEHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFK 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+   L DN+ L+EL   E+D  I++E  +N+  I+ E   ++ E+LL+GE DSND +L+
Sbjct: 70  ELSSNLQDNIELIELGEIEEDEVIIKEAENNILIIQQESAKQELEALLNGEVDSNDTFLQ 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGTES DWANML RMY RWAE++ ++ + +E   G+EAGIKS T  IKG NAYGW
Sbjct: 130 INAGAGGTESCDWANMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGW 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHRLVRISP+DSN++RHTSFSS+WVYPVVDD+I+IEI+ S+ R+DTYR+SGAGG
Sbjct: 190 MKSESGVHRLVRISPFDSNAKRHTSFSSVWVYPVVDDNIDIEINPSEIRVDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPT +VVQ   E+SQH+N+A     L+++LYELE++KR E      
Sbjct: 250 QHVNTTDSAVRITHIPTNIVVQSS-EKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAH 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +K + GWG QIRSYVL PYQMVKDLRTN+E +    VL+GDLD FM ATLA+ 
Sbjct: 309 DNKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLALD 362


>gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30]
 gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30]
          Length = 330

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 214/324 (66%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + +   
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ 
Sbjct: 61  QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N E      V+DGD+  F+++ L 
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLR 324


>gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
 gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
          Length = 328

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 173/326 (53%), Positives = 222/326 (68%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W +   A++++ E   L   ++  K++ +   +  + LEL  EE D  + +E 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLREEPDEELQEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR
Sbjct: 61  GKELAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TL IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLSIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P  DD+IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG +VQCQ ERS
Sbjct: 181 CDVMPEFDDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIVQCQAERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ +A  ML+ KLY+LEL K++   +     + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E  +   V+DGDLD F+ A L  K
Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326


>gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 342

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 237/329 (72%), Positives = 285/329 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S++
Sbjct: 1   MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +SKTEIGWG QIRSYVLQPYQMVKD
Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIRSYVLQPYQMVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +  ++P DVLDGDL++FM+A LA +
Sbjct: 301 LRTGVASSAPDDVLDGDLNEFMEAALAHR 329


>gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909]
 gi|123602195|sp|Q3K2F4|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus agalactiae A909]
          Length = 365

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 221/354 (62%), Gaps = 2/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++   +L       D D   + ++ L  +  +P  W + I A+   +E   L        
Sbjct: 11  VENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +Q+   +  +LLE+   ++D S+ +E  +NL ++   +   +   LLS   D N+A LE
Sbjct: 71  NMQELSDETELLLEML--DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H G+GGTE+QDW ++LLRMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG 
Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGG
Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGG 248

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+THIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +
Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K EI WG QIRSYV  PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362


>gi|229823414|ref|ZP_04449483.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
 gi|229787189|gb|EEP23303.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
          Length = 331

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ +        S I  +++ + D  + LEL  E +D  IL E  
Sbjct: 1   MSAPDFWDDNEKAQKIISQLNLAKETYSTIHALEEGVADIEVALELYDESEDADILAEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + +++ +++  + + LLSG  D+N+A LE+H GAGGTESQDW +MLLRMY RWA+K+ 
Sbjct: 61  GQVAQVQADLDAYEMKLLLSGPHDANNAILEIHPGAGGTESQDWGSMLLRMYQRWADKQG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   L+  DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+DSNSRRHTSF+S+
Sbjct: 121 FKVTVLDYQDGEEAGIKSVTLEIEGHNAYGYLKSEKGVHRLVRISPFDSNSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P++DD+IEI+I+  D RIDTYRASGAGGQH+N T SA+RITHIPTG+V Q Q +RSQ
Sbjct: 181 EVTPMLDDTIEIDINPDDLRIDTYRASGAGGQHINKTSSAIRITHIPTGIVTQSQSQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKLY+LE + + +     +  + +I WG QIRSYV  PY MVKD RT+
Sbjct: 241 FQNRDLAMAMLKAKLYQLEEENKAKELAALKGEQKDIAWGSQIRSYVFHPYAMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDL+ F+ A L  +
Sbjct: 301 YEVGNTGAVMDGDLNGFIDAYLKWQ 325


>gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8]
 gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8]
          Length = 378

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 151/350 (43%), Positives = 231/350 (66%), Gaps = 3/350 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L  ++D +NA +++  L+ K  +P  W +  ++++++++ ++L+  +    +     
Sbjct: 20  IKELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79

Query: 67  CDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +++E+A EED+     +++E    L ++K +++    E+LL+GE D ++A L  HA
Sbjct: 80  DDIEVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDW  ML+RMYT+WA+   F  + ++I +G +AGIKS ++ I+G NAYG+LK 
Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRLVRISP+DS+  RHTSFS++ V P +DD+IE+EI   D  ++ YRASGAGGQH+
Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDNIEVEIRPEDIEMEVYRASGAGGQHI 259

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+V  CQ +RSQ +N+  A  ML+AKL E++ ++  E     +  +
Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EI WG QIRSYV  PY +VKDLRT  E  +   V+DGDLD F+ A L  
Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYLKA 369


>gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 330

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W ++ +++ L + ++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MADPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + + IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELKNDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
 gi|123751448|sp|Q2JEW7|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
          Length = 366

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 219/354 (61%), Gaps = 4/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R   L  +  DP LW +   A+ + R        I+ ++ 
Sbjct: 11  QLDATLTGIETVLDVEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D     +L     D  +L E + +L R+  ++   +  +LLSGE D  DA +++
Sbjct: 71  LRRRLDDIAAAADLG----DEDLLAEAAADLPRLSSDIAGLEVRTLLSGEYDERDAIVQL 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L
Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  ++I + D RID +R+SG GGQ
Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++ +G QIR+YVL PYQMVKDLRT+ E ++ S VLDG+LDDF+ A +  ++
Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEIRWRR 360


>gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 372

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 218/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +   +       D +   + ++    +  +   W + ++A+ ++ E   L N       
Sbjct: 12  NIQENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLN 71

Query: 62  IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +  +  +  +L+E+  E+  D  ++ E  +++ + + ++E    E LL+   D+N+A LE
Sbjct: 72  LTSQAEEIDLLIEMLSEDVTDSEMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILE 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VH G+GGTES DW   L RMYTRWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+
Sbjct: 132 VHPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGF 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E+GVHR VRISP+DS  RRHTSF S+ V P +DD+I+IEI + D ++D +R+ GAGG
Sbjct: 192 LRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIDIEIRDDDVKMDVFRSGGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L+ KLY+LEL+K+E       
Sbjct: 252 QNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALT 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K E GWG QIRSYVL PYQMVKD RT+ E   P  VLDGDLD F+ A L  +
Sbjct: 312 GDKLENGWGSQIRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
 gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
          Length = 365

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 166/352 (47%), Positives = 237/352 (67%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ +  +   D   +RL  +    +DP+ W +   A  + +E+  ++  ++  +  
Sbjct: 13  LKTKVDSIHKIIKPDTLKERLCEIEKLQQDPNFWNDAKRAGEIGKEKSKIERMLATYQNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D   L E++   +D   L+      Q ++ E++  + E +LSGE D  +A + + 
Sbjct: 73  KNSIDDARELFEISA--NDTDTLELLFAESQNLEQEIKKVEIEVMLSGEHDGANAIVTIQ 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW ++L RMY RW E+R FK E L+  DGEEAGIK    L+KG NAYG++K
Sbjct: 131 PGAGGTESQDWGSILYRMYLRWCERRGFKAEILDYQDGEEAGIKGVAFLVKGENAYGYMK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D+N++RHTSF+S+ V P +DD+IEI+I E D RIDTYRASGAGGQH
Sbjct: 191 TESGVHRLVRNSPFDANTKRHTSFASVQVSPELDDNIEIDIEEKDLRIDTYRASGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH+PTG+VVQCQ +RSQHKNKA A  ML++KLYELE +K+   +++    
Sbjct: 251 INKTESAIRITHLPTGIVVQCQNDRSQHKNKASALKMLQSKLYELEREKQN--SSVATQE 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 309 KSEIGWGHQIRSYVLSPYQQVKDNRSNIAYSNVEAILDGDIDSIIEGVLISK 360


>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
 gi|6225943|sp|O67695|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
          Length = 373

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 248/353 (70%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L  +  +   +     L  L+ K  +P+ W++  +AK +++ R+ ++  ++ +K 
Sbjct: 12  ELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETLNKLKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   L+E+  EE D        + ++ ++  +   + ++ LSGE D+ +AYL +
Sbjct: 72  LEKSVKDLEELVEITSEE-DTETWAMMDEEIKEVERTLRELELKTYLSGEMDAKNAYLTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWA+ML RMY RWAEK+ ++ E ++I   + AGIKS T+L+KGP AYG+L
Sbjct: 131 QAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N+RRHTSF+++ V P +D+ I+IEI   D +I+T+RASGAGGQ
Sbjct: 191 KGEQGVHRLVRISPFDANARRHTSFAAVSVMPQIDEDIKIEIKPEDLKIETFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TD+AVRITHIPTG+ V CQQERSQ++NK +A  +L+AKLY+LE++K EE     E 
Sbjct: 251 YVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KT+IGWG QIRSYV  PY+++KDLRT  E  +   V+DG++D+F+++ L  K
Sbjct: 311 EKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWK 363


>gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1]
 gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 337

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 174/334 (52%), Positives = 240/334 (71%), Gaps = 1/334 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++L  +N + EDP++W +   A+ L +E++ L+  +  + +I   L D   L E+A E
Sbjct: 2   KSEKLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMARE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D   +     + + +K  VE  +F  + SG  D+N+ ++++ AGAGGTE+QDWA+MLL
Sbjct: 62  EKDEDTIIAIEGDAENLKKMVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           R Y R+ E++ FK E LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHRLVR SP+DS
Sbjct: 122 RQYLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           ++ RHTSFSS++VYP VD+S EIEI+ +D R+DTYRASGAGGQH+N TDSAVR+TH P+G
Sbjct: 182 SNGRHTSFSSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ +RSQH+N+A+AW+MLRAKL+ELEL+KR       E SKT++GWG QIRSYVL 
Sbjct: 242 IVVQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVL- 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +KDLRTN E  +   VLDGD+DDF+ A+L 
Sbjct: 301 DQSRIKDLRTNFETGNTKAVLDGDIDDFIAASLK 334


>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 369

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 176/353 (49%), Positives = 240/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + + L  +   +   + +  L+    DP+ W +  +A+ +   R +L   +  I  
Sbjct: 12  EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +++ + L  + L   E+D  +  E    L+ I+ E+   +  SLLS E DS +A L V
Sbjct: 72  VDEKINNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  MLLRMYTRWAEKR ++ E ++    + AG+KSAT++IKGP AYG+L
Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATVIIKGPYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRA GAGGQ
Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRAGGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E     E 
Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKAMNMLKAKLYQLELEKRKEKQKELEG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DG++DDF+++ L  K
Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364


>gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
 gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
          Length = 349

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 168/344 (48%), Positives = 240/344 (69%), Gaps = 1/344 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   +++       E    W++   A  +++E + L   +   +++Q  L D  +L
Sbjct: 3   LFDIERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVL 62

Query: 73  LELALEEDD-CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +EL LEEDD   I +E SD++ ++K  ++    ++LLSGE D N+A + ++AG GG ++Q
Sbjct: 63  IELGLEEDDSEDIEKEVSDSINQLKDVIDEMTIQTLLSGEYDKNNAIVSINAGTGGLDAQ 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RWAE R +K + L++    EAGIK+A +LI+G NAYG+LKGE+GVHR+V
Sbjct: 123 DWAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIV 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D + +RHTSF+S+ V P +D++IE+EI++SD +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 183 RISPFDPSGKRHTSFASVDVIPELDENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PTG+ VQCQ ERSQH N+  A  ML AKL +++  +++E     +   T+I WG Q
Sbjct: 243 ITHLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDLQGKYTQITWGSQ 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IRSYV QPY+MVKD RTN E  +   V++G++D F+ + L  KK
Sbjct: 303 IRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLTRKK 346


>gi|332307386|ref|YP_004435237.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174715|gb|AEE23969.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 365

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 183/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            ++   L G  D+D   +RL  +N + E P +W     A+ L +E+  L+  +  I  ++
Sbjct: 15  KQRSTSLRGYLDYDQKSERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D   LLELA+EE D     E   +L  +  ++E  +F  + SG  D+ND Y+++ +
Sbjct: 75  QGCVDVEELLELAVEESDQDTFDEAEKDLAELVAKLETLEFRRMFSGPNDANDGYIDIQS 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RW E   FKTE +E+ DG+ AGIKSAT+  +G  A+GWL+ 
Sbjct: 135 GSGGTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRT 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I  SD RIDTYRASGAGGQHV
Sbjct: 195 ETGVHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH PT +VVQCQ +RSQHKNKAQA   L+AKLYE E+QK+ E     E SK
Sbjct: 255 NRTDSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQNMEDSK 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 315 SDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIQASLK 362


>gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
 gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
          Length = 329

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 168/328 (51%), Positives = 228/328 (69%), Gaps = 1/328 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +  +  +W N   A+ L RER  L+  +  I+ +   + D   LL++A+EE+D S++
Sbjct: 1   MELELAESSVWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEENDESMV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +    + R++ E+   +F  + SGE D N+AYL++ +G+GGTE+QDWA M+LRMY RW 
Sbjct: 61  ADVQAEIDRLEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRMYLRWG 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + FK    E   GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTS
Sbjct: 121 EAKGFKVTLEECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F S++V P +DD+IEIEI+ +D RIDTYRASGAGGQHVN TDSA+RITHIP+G+VVQCQ 
Sbjct: 181 FCSVFVSPEIDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGIVVQCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH N+ +A+ MLRA++YE E+ KR       E SK++IGWG QIRSYVL     VKD
Sbjct: 241 ERSQHANRDKAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWGSQIRSYVLDDS-RVKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           LRT ++ ++   VLDGDLD F+  +L  
Sbjct: 300 LRTGVQTSNTQAVLDGDLDQFIVESLKA 327


>gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
 gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
          Length = 330

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E  
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA+ML RMY++WA+K+ 
Sbjct: 61  QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ ++             EIGWG QIRSYVLQPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDG++D F+   L  
Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324


>gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
 gi|259585228|sp|C5CGS4|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
          Length = 370

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 174/347 (50%), Positives = 233/347 (67%), Gaps = 2/347 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +    D D   ++LS +  +  DP +W +   A  L ++ Q L + +  + +
Sbjct: 12  ELRDKFENIKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q+   +  I +EL+  E+D S L+  ++ L+  +  V+  +   LLS   D+ +AYL V
Sbjct: 72  VQELFENIDIAVELS--EEDESYLENLNELLKEAEDMVKEFELNILLSSPYDAYNAYLSV 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE+  +K   +E   GEEAGIKSAT+ I GP AYG L
Sbjct: 130 HPGAGGTESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+S+ V+P +DD +EI+I   D +IDTYRA GAGGQ
Sbjct: 190 KYEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDDDVEIDIRPEDLKIDTYRAGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VV CQ ERSQH+NKA A  +L+AKL+ELEL+K+ +       
Sbjct: 250 HVNRTESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            + +I WG QIRSYV QPY MVKD RTN E      V+DG +DDF++
Sbjct: 310 EQKDIAWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIE 356


>gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale DSM 17629]
          Length = 330

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E  
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA ML RMY++WA+K+ 
Sbjct: 61  QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ ++             EIGWG QIRSYVLQPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDG++D F+   L  
Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324


>gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3]
 gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3]
          Length = 325

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 164/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L   +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 64  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIEI   D ++DTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDEVEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
          Length = 331

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F+++ L 
Sbjct: 301 TNEETGKVDAVMDGDVGPFIESYLR 325


>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229576671|sp|B2V5M0|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 369

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 178/353 (50%), Positives = 240/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + + L  +   +   + +  L+    DP+ W +  +A+ +   R +L   +  I  
Sbjct: 12  EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  ++ + L  + L   E+D  +  E    L+ I+ E+   +  SLLS E DS +A L V
Sbjct: 72  VDKKVNNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  MLLRMYTRWAEKR ++ E ++    + AG+KSATL+IKGP AYG+L
Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRASGAGGQ
Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E     E 
Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DG++DDF+++ L  K
Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364


>gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
 gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
          Length = 330

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 161/325 (49%), Positives = 220/325 (67%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W +   A+ ++ +   L + ++   E+++ + D    +EL  EE D  + QE 
Sbjct: 1   MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQEEFDEDMKQEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +N+   K E+++ + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ 
Sbjct: 61  ENNVVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F++A L 
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLR 325


>gi|307265609|ref|ZP_07547163.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919407|gb|EFN49627.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 330

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 161/325 (49%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E ++   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETIDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E+ + + V+DG++D F+ A L  K
Sbjct: 301 YEEGNVNAVMDGEIDGFINAYLKQK 325


>gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           132]
          Length = 331

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F+++ L 
Sbjct: 301 TNEETGKVDAVMDGDIRPFIESYLR 325


>gi|147732321|sp|Q68X96|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            + + L  +    D ++   RL+ L   T DP LW N   A++L+RE+ +++  ++    
Sbjct: 11  NIEQSLELIWRSLDIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D L L  +A  E+D   L +   + +++ +     + E L S E+D N+ +LE+
Sbjct: 71  LKSNFEDILELEAMAEVENDFETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR +  +   +
Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQ+VKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAM 362


>gi|282891215|ref|ZP_06299718.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498908|gb|EFB41224.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 341

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 157/335 (46%), Positives = 220/335 (65%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   ++  L T+ E P  W +   A+ ++ E   L        ++++R  +   LL+ A 
Sbjct: 3   SKEAKVKALETEMEAPTFWDDNDAAQKVIAECNALKAWTIPYHDLKERYSNVSELLQEAF 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +  + S++QE  + L  I+  ++  +   +L+GE DS +A+L ++AGAGGTE+ DW  ML
Sbjct: 63  DLGEESLIQELVEELDSIEASLKELEIRKMLAGELDSKNAFLSINAGAGGTEACDWVLML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWA K+ +K E ++  DG+ AGIKS T    GP AYG+ K E+GVHRLVRISP+D
Sbjct: 123 SRMYQRWAAKKNWKVEVIDTVDGDVAGIKSITYKFTGPFAYGYAKAEKGVHRLVRISPFD 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           SN++RHTSF+S+ + P + D I+IEI   D R+DT+RASGAGGQHVN TDSAVR+TH+PT
Sbjct: 183 SNAKRHTSFASVDITPEITDDIQIEIRPEDLRVDTFRASGAGGQHVNRTDSAVRLTHLPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VV CQ +RSQ +NK   + MLR+KLYE+E+  RE         K EI WG QIR+YV 
Sbjct: 243 GIVVSCQAQRSQLQNKETCYKMLRSKLYEMEVTARENALKAMGGEKKEIAWGSQIRNYVF 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QPY +VKD RT +E  +   V+DG+LDDF+ A L 
Sbjct: 303 QPYTLVKDTRTKVECGNIQAVMDGELDDFVNAYLM 337


>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
 gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
          Length = 353

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 164/346 (47%), Positives = 219/346 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GGLFD +     L+        P  W +  +A+ ++     L         + D  
Sbjct: 1   MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +L E+  EE D  + +E  + +Q  + ++   +   LLSGE D NDA LE+H GAG
Sbjct: 61  EELTLLNEMVKEEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDALLEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA+MLLRMY RWA++  ++   L+  +G+EAGIKS TL IKG NAYG+LK E G
Sbjct: 121 GTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+DSN RRHTSF+S+ + PV+D + EIEI ESD  +D +RASGAGGQH+N T
Sbjct: 181 IHRLVRISPFDSNKRRHTSFASVEIMPVLDQNTEIEIDESDIEMDVFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+  A  ML+AKL  L  +K  +  +     K+EI
Sbjct: 241 SSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L 
Sbjct: 301 AWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYLK 346


>gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 367

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 219/353 (62%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE D S+     D L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRVRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I ++D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E+       
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEEQAELDALG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +  +
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359


>gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
          Length = 327

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 163/325 (50%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMEAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDKDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D ++DTYRASGAGGQHVNTTDSAVRITHIPT  +V CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
 gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
          Length = 323

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 154/322 (47%), Positives = 218/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    QE  
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAQEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++ + V+DGD+D+F+ A L
Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321


>gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803]
 gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803]
          Length = 326

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 215/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A++++ E   L   +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQVVINEANALKEMVGKFRKLDETFENLEITHELLKEEYDEDLHEELEAEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|205375066|ref|ZP_03227857.1| hypothetical protein Bcoam_18782 [Bacillus coahuilensis m4-4]
          Length = 327

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ L+ E   L + +     + +   +  +  EL  EE D  +L E  
Sbjct: 1   MVDPDFWNDQQKAQGLINEANGLKDMVGQYHSMVEAHENLEVTFELVKEEGDEELLAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +  ++   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  PELNDLTKQLNNYELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT  VV CQ ERSQ
Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML++KLY+L+++++E         + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNREAAMKMLKSKLYQLKIEEQEAQLAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + + V+DGDLD F+ A L  +
Sbjct: 301 TEVGNTNSVMDGDLDVFIDAYLRSR 325


>gi|288554120|ref|YP_003426055.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
 gi|288545280|gb|ADC49163.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
          Length = 328

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 166/323 (51%), Positives = 222/323 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L   ++   E++++  +  +  EL  EE D  + +E  
Sbjct: 1   MTAPDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYELVKEEADEELEKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +   +   + + LLS   D N+A LE+H GAGGTESQDWA+MLLRMYTRW+E+R 
Sbjct: 61  AGVKELISRLNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWSEQRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI+I   D ++DTYRASGAGGQH+NTTDSA+RITH+PT  VV CQ ERSQ
Sbjct: 181 EVMPELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRITHLPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+++        + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRDQAMKMLKAKLYQLEIEKQQQELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  + + V+DGDLD F+ A L 
Sbjct: 301 FEIGNTNAVMDGDLDGFINAYLR 323


>gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
 gi|156864534|gb|EDO57965.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
          Length = 329

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 163/324 (50%), Positives = 222/324 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +V ++  + R+ + L +++   ++++    D   L+++A EE D S+++E  
Sbjct: 1   MEQPGFWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEEEGDSSMIEEIG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   + E E  +   LLSGE D  DA + +HAGAGGTES DW +ML RMYTRWAEK  
Sbjct: 61  EMLTAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEKHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+  +G+EAGIKS T+ I G NAYG+LK E+GVHRLVRISP+++  +R TSF+S 
Sbjct: 121 FKVEVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +E++I+E D RIDTYR+SGAGGQH+N T SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 181 DVIPEIEEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML++KLY ++ Q+  +  +       E G+G QIRSYV+QPY MVKD RT 
Sbjct: 241 HMNKDKAMQMLKSKLYLIKKQENLDKISDIRGEILENGFGSQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + VLDG+LD FM A L  
Sbjct: 301 EESGNVAAVLDGELDGFMNAYLKW 324


>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
 gi|166225108|sp|A0QU58|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
          Length = 368

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 157/352 (44%), Positives = 216/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP+LW +   A+ +  +  H  N +  ++ +
Sbjct: 12  LDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA E      + E    L +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  IEI E+D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIPENDIRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  +  
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAELDALKGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 GGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGIRWR 362


>gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7]
 gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7]
          Length = 378

 Score =  361 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 152/350 (43%), Positives = 231/350 (66%), Gaps = 3/350 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L  ++D +NA +++  L+ K  +P  W +  ++++++++ ++L+  +    +     
Sbjct: 20  IRELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79

Query: 67  CDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +++E+A EED+     +++E    L ++K +++    E+LL+GE D ++A L  HA
Sbjct: 80  DDIEVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDW  ML+RMYT+WA+   F  + ++I +G +AGIKS ++ I+G NAYG+LK 
Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRLVRISP+DS+  RHTSFS++ V P +DD+IE+EI   D  ++ YRASGAGGQH+
Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDTIEVEIRPEDIEMEVYRASGAGGQHI 259

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+V  CQ +RSQ +NK  A  ML+AKL E++ ++  E     +  +
Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EI WG QIRSYV  PY +VKDLRT  E  +   V+DGDLD F+ A L  
Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYLKA 369


>gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
 gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
          Length = 323

 Score =  361 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 153/322 (47%), Positives = 220/322 (68%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E  
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  NEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
 gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
           fusca YX]
          Length = 375

 Score =  361 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 221/354 (62%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  L  +  + D D     +  L  ++ DP LW +   A+ + R    L++ +S ++ 
Sbjct: 12  ELTSTLENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVEN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ R+ D  +L ELA  E+D   L E    L  ++ ++   +  +LLSG  D  +A + +
Sbjct: 72  IRSRIDDLGVLFELAAAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DW  ML RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L
Sbjct: 132 NAQAGGVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGML 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+ SRR TSF+ + V PVV+ S  IEI ES+ RID YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQSRRQTSFAGVDVVPVVEQSDHIEIDESELRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A ++L+AKL E + Q+ E        
Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+R+YVL PYQ VKD+RT +E  + S VLDG++D+F+ A +   +
Sbjct: 312 ESAR-AWGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGIRWLR 364


>gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073]
 gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella
           thermoacetica ATCC 39073]
          Length = 330

 Score =  361 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 157/326 (48%), Positives = 222/326 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W++   A+ + +   +L   ++  +E++ +  D   L +LAL EDD S+ +E +
Sbjct: 1   MLAPGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEEIA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  ++ +VE +   +LL+G  D ++A L +H GAGGTESQDWA MLLRMY RW E R 
Sbjct: 61  RDLAAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+  +GEEAG+KSAT+L+KG NAYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 YQVELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P V+   E+EI+  D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVIPEVEADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+  A  +L+A+L  L+ Q++E         + EI WG QIRSYV  PY +VKD RT 
Sbjct: 241 HANRLSAMKILQARLAALKRQEQEAELAQIRGEQREIAWGSQIRSYVFHPYSLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E  +   V+DG +D F++A L  ++
Sbjct: 301 VETGNIQAVMDGQIDPFIQAYLHWQR 326


>gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 332

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 173/329 (52%), Positives = 232/329 (70%), Gaps = 1/329 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  I ++   + D   LLELA+EE+D  
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEEDQE 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L  ++ ++E  +F  + SG+ DS+D Y+++ +G+GGTE+QDW +MLLRMY R
Sbjct: 62  TFDEIEPELIELEFKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + FKTE +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRH
Sbjct: 122 WAEAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S ++YP +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQC
Sbjct: 182 TSFASAFIYPEIDDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 KDLRTGIENRNTQAVLDGDLDKFIEASLK 329


>gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46]
          Length = 331

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F+ E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFEVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F+++ L 
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325


>gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021]
 gi|307315054|ref|ZP_07594639.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
 gi|307317885|ref|ZP_07597323.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein
           [Sinorhizobium meliloti 1021]
 gi|306896647|gb|EFN27395.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|306898893|gb|EFN29543.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
          Length = 342

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 231/329 (70%), Positives = 281/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD+ I+ ++  + +L DN+ L+EL  EE D +I+
Sbjct: 1   MNNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L++++ E   KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  AEAEEALRQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVD+SI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ
Sbjct: 181 FSSIWVYPVVDESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +E +SP DVLDG+L++FM+A LA +
Sbjct: 301 LRTGVESSSPGDVLDGELNEFMEAALAHR 329


>gi|310644311|ref|YP_003949070.1| protein chain release factor b-like protein [Paenibacillus polymyxa
           SC2]
 gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa
           SC2]
          Length = 339

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 164/332 (49%), Positives = 230/332 (69%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++    K   P  W +  +A+ ++ E   + +++   ++++    D  +++ELA EE D 
Sbjct: 2   IANFEEKMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGDE 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           +++ E  ++++ +  ++E  + + LL+   D  +A LE+H GAGGTESQDW  MLLRMYT
Sbjct: 62  ALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYT 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RW EKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR
Sbjct: 122 RWGEKRGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S  V P + D ++IEI   D +IDTYRASGAGGQH+NTTDSAVRITH+PTG+VV 
Sbjct: 182 HTSFVSCDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ KN+ +A  MLR+KLYE +++++++  +     +++I WG QIRSYV  PY M
Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKD RT++E  +   V+DGDLD F+   L  +
Sbjct: 302 VKDHRTSVETGNVGAVMDGDLDPFIDGYLRSQ 333


>gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 331

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE +  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFEGEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F+++ L 
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325


>gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
 gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
          Length = 347

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 160/344 (46%), Positives = 221/344 (64%), Gaps = 2/344 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD +   + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ 
Sbjct: 4   GGLFDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESE 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ILL+   E  D S+ +E  + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+
Sbjct: 64  ILLDFLAE--DDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEA 121

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRL
Sbjct: 122 QDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRL 181

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + V
Sbjct: 182 VRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGV 241

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG 
Sbjct: 242 RLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGS 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L  +
Sbjct: 302 QIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 345


>gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
 gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
          Length = 332

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L         ++D++ D    +EL   E D  + ++  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDDLQRDFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  + +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  
Sbjct: 61  VSFTKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I  SD R+DT+R+SGAGGQH+N  +SAVRITHIPTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325


>gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
 gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
          Length = 323

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 153/322 (47%), Positives = 219/322 (68%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E  
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
           KM-6054]
          Length = 351

 Score =  361 bits (927), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 2/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++ +  + D D     ++ L  +   P LW +V  A+ +      L   +  ++ ++ R+
Sbjct: 1   MSSIEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  EDD     E    L  ++  VE  +  +LLSGE D+ +A + + A AG
Sbjct: 61  EDLGVLFELAEAEDDADTRTEAEAELVSVQKAVEELEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L+RMY RWAE+  + TE  +    EEAGIKSAT  +K P AYG L  EQG
Sbjct: 121 GVDAADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E D RID YRASG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVDIDEGDLRIDVYRASGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +        
Sbjct: 241 DSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEERAAMDALKDGGS 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  VLDGD+D F++A +  +K
Sbjct: 299 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFIEAGIRWRK 347


>gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
 gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
          Length = 325

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 174/324 (53%), Positives = 228/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W     A+ L +ER  L+  ++ I ++     D   LLELA+E +D     E  
Sbjct: 1   MEQPDVWNEPERAQALGKERAALEAIVATIDQLAQGGEDVNGLLELAVEAEDEETFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L ++ +++E  +F  + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + 
Sbjct: 61  IELDQLMVKLERLEFCRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E  DG+ A +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+
Sbjct: 121 FKTEVIEESDGDVARLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP VDD I++EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQ
Sbjct: 181 FIYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK QA+  LRAKLY+ E+QK+       E +K++IGWG QIRSYVL     +KDLRTN
Sbjct: 241 HKNKDQAFKQLRAKLYDFEMQKKNADKQTMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VETRNTQAVLDGDLDKFIEASLKA 323


>gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c]
 gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c]
          Length = 367

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 223/354 (62%), Gaps = 4/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L   L  +  + D +   +R + L  +  DP LW +   A+++ R+   +   IS ++ 
Sbjct: 11  NLDSTLTGIETVLDVEGLRRRAADLEQEASDPDLWSDQDRAQVVTRKLSSVRGDISRVEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++DRL + +   EL    +D  ++ E +  L  +  ++   +  +LLSGE D  DA +++
Sbjct: 71  LRDRLDNIMTAFEL----EDDDLISEATGQLPTLARDISTLEVRTLLSGEYDERDAIVQL 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT L+K P AYG L
Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYSTEVYDSSEAEEAGLKSATFLVKAPYAYGTL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + + PVV+ S  ++I + D R+D +R+SG GGQ
Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEITPVVELSDHVDIDDKDLRVDIFRSSGPGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQAKLLERRRAEEAAEKQRLTG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++ +G QIR+YVL PYQMVKDLRT +E ++   VLDG++DDF+ A +  ++
Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGGVLDGEIDDFIDAEVRWRR 360


>gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str.
           A2012]
          Length = 325

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 64  GLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
 gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
          Length = 373

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 156/349 (44%), Positives = 229/349 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D D    R++ +   +  P  W +  +A+ L++E+  L+ ++    ++
Sbjct: 12  LRERVLALRGHLDLDRKRSRIALIERDSTLPTFWDDNTKAQALLKEKSTLEASVGAYDKV 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +L ELA+E +D +  QE   +L  ++ +V   +   +LSGE D +  +++++
Sbjct: 72  MRGLDDAQVLFELAVEANDEATTQEAEGSLTGLEGDVAKLELARMLSGEQDRSSCFMDIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT+S DWA MLLRMYTR+ E + +K E  +   GEEAG K+ +L I+G  AYG+LK
Sbjct: 132 AGAGGTDSMDWAAMLLRMYTRYCENKGWKVEINDEVPGEEAGFKNVSLRIEGDFAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RR T+F+S+ VYP VDD+I+I+I E D  +   R  GAGGQ 
Sbjct: 192 AEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGGQK 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T S  ++ H+PTG+++ CQ ERSQ  NK  A+ +LR +LYELE++KRE   +  E+ 
Sbjct: 252 VNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRLYELEMKKREAARDAAEAQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I +G QIRSYVL PY+MVKDLRT IE  +   VLDGDL++F+ + L
Sbjct: 312 KKDISFGSQIRSYVLAPYRMVKDLRTGIETGNVDAVLDGDLEEFVTSQL 360


>gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87]
 gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87]
          Length = 333

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 216/327 (66%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP  W +  +A+ ++ +   L + ++  +++ + + D     EL  EE D  + +E 
Sbjct: 1   MMADPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQEEYDEDMKEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++ + K +++  + + LL G  D+N+A  E+H GAGGTESQDWA+MLLRMY R+ E+ 
Sbjct: 61  ESDVIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F  E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFNVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+ +L ++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQQKLDEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRKE 327


>gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
 gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
          Length = 327

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 162/324 (50%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E             + + L +  +++E+  EE D ++ +E  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV  Q +RSQ
Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DGDLD F+   L +
Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324


>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
 gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
          Length = 368

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +     +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKADAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD   L E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRIDDLAVLFEMAEEEDDSDTLAEAESELTSVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE++ +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E    + E+ A      
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRR-QEEQAAMDALKG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 312 DGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437]
          Length = 331

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 228/325 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E  HL   +  +KE+++   +  ++ EL  EEDD S+L E  
Sbjct: 1   MTDPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+ +K +++  +   LLS   D N A LE+H GAGGTESQDWA +LLRMYTRWAE R 
Sbjct: 61  EGLKDLKRKLDEFELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRWAEHRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+   GEEAG+KS TLLIKG NAYG+L+ E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 YKVETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHTSFVSA 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D  EIEI   D +IDTYR+SGAGGQHVNTTDSAVRITH+PT +VV CQ ERSQ
Sbjct: 181 NVMPEIEDDDEIEIRSEDIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  +L+A+L E +++++++     +  +TEIGWG QIRSYV  PY MVKD RT 
Sbjct: 241 IKNRDRAMKILKARLVERQMEEKQKEIAELKGEQTEIGWGNQIRSYVFHPYSMVKDHRTQ 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F++A L  +
Sbjct: 301 VEVGNVQSVVDGEIDTFIEAYLRQQ 325


>gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
 gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
          Length = 364

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 220/353 (62%), Gaps = 6/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  +  + D D    R   L  +  DP LW +   A+ +  E   +   +  ++ +
Sbjct: 12  LEQTLTTIEKVMDLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA EE D ++     D L  +   VE  +  ++LSGE D  +A + + 
Sbjct: 72  RQRIDDLPVMYELAAEEGDYTL---AEDELADLTTAVETLEVTTMLSGEYDQREAVVNIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I +S+ RID YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIPDSEIRIDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GES 301
           VNTTDSAVRITH PTG+VV CQ E+SQ +NKA A N+L++KL  LE +++EE A +    
Sbjct: 249 VNTTDSAVRITHEPTGIVVTCQNEKSQIQNKASAMNVLQSKL--LERKRQEEKAELDALG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D F+++ +  +
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359


>gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
 gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
          Length = 333

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 196/312 (62%), Positives = 247/312 (79%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ LMRER  L N I  ++ ++  + D L L+ELA  E D +++ E    L+ +
Sbjct: 2   WNDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRAL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             E + ++ ESLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +
Sbjct: 62  AEEAKRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVV
Sbjct: 122 ESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DDSIEIEI+E+D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A 
Sbjct: 182 DDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRAT 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML+A++YE ELQKRE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P
Sbjct: 242 AMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKTNP 301

Query: 336 SDVLDGDLDDFM 347
             +LDGD+DDFM
Sbjct: 302 DAILDGDIDDFM 313


>gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
 gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
          Length = 326

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  GLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325


>gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
 gi|254790922|sp|B9L0E3|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
          Length = 374

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 156/350 (44%), Positives = 224/350 (64%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L+ +G      +  Q++  L  +  DP LWQ+   A+ L+R    L + +   + 
Sbjct: 11  ELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQEWET 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D L L  LA   DD  +  +       +   V   +   LL+G+ D +DA L V
Sbjct: 71  LSQQARDLLELRALA--SDDLELAGQVEQEATELAERVRQLELRLLLTGQYDGHDAILAV 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG GG ++QDWA MLLRMY RWA++  F  E +++ +GEEAGIKSAT+ ++GP AYG+L
Sbjct: 129 HAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGYL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVR+SP+D+  RRHTSF+ + V P+V++  ++EI E D RIDT+RASG GGQ
Sbjct: 189 KGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLVEEDDDVEIREEDIRIDTFRASGHGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  +L+A+L EL++++R+E     + 
Sbjct: 249 HVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLKG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                GWG +IRSYVL PY MV D RT +   +   VL+G++D F++A L
Sbjct: 309 KPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358


>gi|242242124|ref|ZP_04796569.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
 gi|242234437|gb|EES36749.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
          Length = 332

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 220/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ +   L + +S   ++ + + D     EL  EE D  + +E  
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDWA MLLRMY R+ E+  
Sbjct: 61  EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWAGMLLRMYQRYCEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DG++  F++A L  +
Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326


>gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
 gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
          Length = 323

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 152/322 (47%), Positives = 219/322 (68%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   + + +R+ D  +L EL +EE+D    +E  
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKEL-MEENDEETAKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905]
 gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905]
          Length = 328

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 170/326 (52%), Positives = 224/326 (68%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W +   A++++ E   L   ++  KE+++   +  + LEL  EE D  + +E 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEEIHENLDMTLELLREEPDEELQEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR
Sbjct: 61  GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P  D++IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS
Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ +A  ML+ KLY+LEL+K++   +     + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E  +   V+DGD+D F+ A L  +
Sbjct: 301 NEETGNVGAVMDGDVDPFINAYLRSR 326


>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 336

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 169/332 (50%), Positives = 237/332 (71%), Gaps = 1/332 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  +  LWQ+  +A+ +++ER  + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +GE  GIKSA + I G  AYGW K E G+HRLVRISP+D+N 
Sbjct: 122 IRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QMVKDLRT  E  + + V DG++D F+ + L 
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333


>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
 gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
          Length = 336

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 169/332 (50%), Positives = 238/332 (71%), Gaps = 1/332 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  + +LWQ+  +A+ +++ER  + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +GE  GIKSA + I G  AYGW K E G+HRLVRISP+D+N 
Sbjct: 122 VRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QMVKDLRT  E  + + V DG++D F+ + L 
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333


>gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
 gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
          Length = 374

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 193/351 (54%), Positives = 236/351 (67%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP LW +   A+ LMRERQ L ++I     I
Sbjct: 12  IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L  +K     K+ E+LL GEAD ND +LE++
Sbjct: 72  ARELADNVELIELGEMEDDSEVVAEAEAALAALKERAAQKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAEKR +K E      G EAGIKS +  I GPNAYGWLK
Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+     R TSF+S+WVYPVVDD+IEIEI+ S+ R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIEIEINPSEIRLDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 251 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K   GWG QIRSYVLQPYQMVKDLRT  E +    VLDG LD FM ATLA+
Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAM 360


>gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 371

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 177/349 (50%), Positives = 237/349 (67%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
               LG   + D+  +++  LN K  +P  W +   A+ ++RE       I    ++ D 
Sbjct: 18  TTKSLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETNSYQRKIDQYDKLIDL 77

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   L+ L   E+D S   +  + +  I+ +    +  +LL+GE DS+DA L +HAGA
Sbjct: 78  ITDAEDLIALMEIEEDYSSYSDFQELVDEIEKDTAEFKLNTLLNGEYDSHDAILSIHAGA 137

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMYTR+AE + FK E L++   +EAGIKS TL I G NAYG+LKGE+
Sbjct: 138 GGTEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSVTLKISGDNAYGYLKGEK 197

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DSN RRHTSFSS+ V+P +DD  E+EI + + +IDTYR+SGAGGQHVNT
Sbjct: 198 GVHRLVRISPFDSNKRRHTSFSSVDVFPEIDDDTEVEIKDEELKIDTYRSSGAGGQHVNT 257

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL  L  ++++E     + + ++
Sbjct: 258 TDSAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLVALAEEEKKEKIEDLQGNYSQ 317

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I WG QIRSYV QPY MVKD RTN++      V+DGDLD F+ A L  K
Sbjct: 318 IAWGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFINAYLQDK 366


>gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
 gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
          Length = 323

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 152/322 (47%), Positives = 218/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E  
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMY RW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
 gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
 gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
 gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium sp. P08]
          Length = 371

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 219/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +   LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFATADDDKESLTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  +K E L+    EEAGIKSAT ++  P +YG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGIRWRR 366


>gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1]
 gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp.
           CCS1]
          Length = 375

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 191/353 (54%), Positives = 243/353 (68%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+   L  LG   D + A  RL   N + EDP+LW +  +A+ LMR+RQ L + +   + 
Sbjct: 11  KIRNSLTLLGQRMDIETAPHRLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYET 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN  L+EL   EDD  ++ E    L  +  E   K+ E+LL GEADSND +LE+
Sbjct: 71  IRQGVDDNAELIELGEMEDDAEVVAEAEAALTALVDEAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMYTRWAEK+ +  +      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDG++D  M + LA+ 
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTAFETSDTQGVLDGNIDGLMASVLAMD 362


>gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046]
          Length = 328

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 171/325 (52%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E   +   ++  KE+ D   +  + LEL  EE D  + +E  
Sbjct: 1   MLEPEFWNDQNGAQAIINESNGIKAVVNEYKELVDTQENLEMTLELLREEPDEELQEEIG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   + ++E  + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  KELAEFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   ++   G+EAGIKS TL I G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVTTIDYLPGDEAGIKSVTLQISGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D ++DTYRA+GAGGQH+NTTDSAVRITH+PTGVVVQCQ ERSQ
Sbjct: 181 DVMPEFNDEIEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVVQCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML++KLY+LE++K++   +     + EIGWG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 AETGNVGAVMDGDLDIFITAYLRSK 325


>gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
 gi|166225116|sp|A2RFN2|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
          Length = 365

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 220/354 (62%), Gaps = 2/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++   +L       D D   + ++ L     +P  W + I A+   +E   L        
Sbjct: 11  VENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +Q+   +  +LLE+   ++D S+ +E  +NL ++   +   +   LLS   D N+A LE
Sbjct: 71  NMQELSDETELLLEML--DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H G+GGTE+QDW ++LLRMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG 
Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGG
Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGG 248

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+THIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +
Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K EI WG QIRSYV  PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362


>gi|319401169|gb|EFV89384.1| peptide chain release factor 2 [Staphylococcus epidermidis FRI909]
          Length = 332

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 221/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ +   L + +S   ++ + + D     EL  EE D  + +E  
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+  
Sbjct: 61  EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DG++  F++A L  +
Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326


>gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189040006|sp|A8AY61|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 364

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 220/351 (62%), Gaps = 2/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L    G  D +   + ++ L  K  +P  W + I A+   +E   L        ++ 
Sbjct: 14  REKLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMT 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           D   ++ ILL+   E  D S+ +E  + L  ++  +   +   LLS   D+N+A LE+H 
Sbjct: 74  DLFDESEILLDFLAE--DDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHP 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GP+AYG LK 
Sbjct: 132 GSGGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKS 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V
Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K
Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EI WG QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L  +
Sbjct: 312 KEISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
 gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
          Length = 330

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 221/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
 gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
          Length = 329

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E            ++ +   +  +LLE+  EE D  +  E +
Sbjct: 1   MADPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQEEPDAEMEAELA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q +  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ERIQALNEKMGTYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 372

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 169/349 (48%), Positives = 235/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L +L ++T +P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLC 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL++EE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSIEEGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           T+IGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TDIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 329

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 163/326 (50%), Positives = 217/326 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ LM E   L + +     ++ RL D    +ELA E DD  + +E  
Sbjct: 1   MSAPDFWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLGREAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +   R +  +   +  +LL+G  D    Y+ +HAGAGGTE+ DWA+MLLRMY RW E+R 
Sbjct: 61  EEFARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWCERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F    LE  DG++AGI+S TL + G  AYG+LK E+G+HRLVRISP+DS  +RHTSF+S+
Sbjct: 121 FSVTYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
              P V DSI IEI + D ++DTYR+ G GGQ+VN  ++AVRITHIP+GV+V CQ ERSQ
Sbjct: 181 DATPEVSDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A NMLRAKLY++E  K++  A+   S K +IGWG QIRSYV QPYQMVKDLRT 
Sbjct: 241 LRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQMVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E  +  DV+DG+LD F++A L   K
Sbjct: 301 VESGNIQDVMDGNLDPFIEAMLRGHK 326


>gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
 gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
          Length = 368

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 214/354 (60%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L   +  +  + D      +++ L  +   P LW +  +A+ +  +   L   ++    
Sbjct: 11  NLRTTMASIEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFST 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D  +L EL   E D   L E    L  +   V   +  +LLSGE D+ +A + +
Sbjct: 71  LNRRLEDIEVLFELGQSEGDEDALAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            A AGG ++ D+A MLLRMYTRWAE+  ++ E  +    EEAGIKSATL +K P AYG L
Sbjct: 131 RAEAGGVDAADFAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E + R+D YR+SG GGQ
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+P+G+VV CQ ERSQ +N+A A  +L+AKL +    + E+       
Sbjct: 251 GVNTTDSAVRITHLPSGIVVSCQNERSQIQNRASAMAVLQAKLLQRRR-EEEQAKMDALK 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   WG Q+RSYVL PYQ+VKDLRTN E  + + VLDGD+D+F++A +  +K
Sbjct: 310 DDSSGSWGNQMRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWRK 363


>gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
 gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
          Length = 369

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E  + L  ++  ++  +  +LLSGE    +A + + 
Sbjct: 73  RGRIDDLAVLFELAQEMDDADTLAEAENELTSVRKALDEMEVRTLLSGEYAEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E + RID YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVESSDHVEIDEGELRIDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363


>gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
 gi|123128746|sp|Q0C0Y0|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
          Length = 368

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 206/352 (58%), Positives = 255/352 (72%), Gaps = 2/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+      L    DWD A +RL  L   +E P+ W +  EA+ +MRERQ L + I+ ++ 
Sbjct: 11  KIESSAALLRRRLDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQT 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   L+ELA  E D S+L +    L+R        +  +LLSGEAD ND YL++
Sbjct: 71  LEKDVADAPELMELA--EGDASMLADLEATLRRAAARAAEAELAALLSGEADGNDCYLQI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AG GGTESQDWA++L RMY RWAEKR +  E L+  DGEEAGIKSATL IKG NAYGWL
Sbjct: 129 NAGEGGTESQDWASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K EQGVHRLVRISP+DS++RRHTSFSS+ V PV+DD I++EI+ SD R DTYRASGAGGQ
Sbjct: 189 KSEQGVHRLVRISPFDSSARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTYRASGAGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVR+THIPT  VVQCQ  RSQH+N+ +AW MLR+KLYELELQKR  +A+   +
Sbjct: 249 HVNRTDSAVRLTHIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYA 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K+ IG+G QIRSYVLQPYQMVKDLRT +E +  S VLDGD+D F+ A LA 
Sbjct: 309 DKSAIGFGHQIRSYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAA 360


>gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300909208|ref|ZP_07126669.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
 gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300893073|gb|EFK86432.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
          Length = 332

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L         ++D++ D    LEL   E D  + ++  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAVEPDDDLQKDFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +    +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  
Sbjct: 61  ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRWGEQHA 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325


>gi|319891756|ref|YP_004148631.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
           ED99]
          Length = 329

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 219/325 (67%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP  W N   A+ ++ +   + + ++   E+ + L + +   EL  EE D  +  + 
Sbjct: 1   MMADPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQEEYDDEMKDDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   + +V+  + + LL GE D+N+A LE+H GAGGTESQDW NMLLRMY R+ E++
Sbjct: 61  EQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQQ 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS T+L+KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IE+EI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML+AKLY+LEL+++E+        + +IGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E  + + V+DG++  F++A L 
Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLR 325


>gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1]
          Length = 372

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 157/349 (44%), Positives = 235/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            +++  L  + + +NA +R++ L  +T     W ++  ++ +++E++ L+  I    ++ 
Sbjct: 15  RKEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERKIEKFNKLN 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           D L D + L+EL++E +D S ++E     +  K ++E ++  +LL+GE D  +A L  HA
Sbjct: 75  DSLEDLITLIELSIEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYDGANAILTFHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA ML RMY RWAE+ +FK E L+  DG+EAG+KSA++LI+G NAYG++K 
Sbjct: 135 GAGGTEAQDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIEGENAYGYMKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+D+  RRHTSF+++ V P +DDSIE++I   D  ++ YR+SGAGGQ V
Sbjct: 195 ESGVHRLVRVSPFDAQGRRHTSFAALEVMPELDDSIEVDIRPEDIEMEVYRSSGAGGQKV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+VV CQ +RSQ++NK  A  MLR+KL E++ ++  E     +  +
Sbjct: 255 NKTSSAVRLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGVQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +I WG QIRSYV  PY +VKD RT  E  +   V+DGD+D F+ A L 
Sbjct: 315 NQIAWGSQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYLK 363


>gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
 gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
          Length = 363

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 167/349 (47%), Positives = 224/349 (64%), Gaps = 4/349 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD +   +R++           W +  +A+ L+ E + L N I   + +   +
Sbjct: 2   LTKFGGVFDSEAVKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADI 61

Query: 67  CDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D   L EL  E  D      +QE   +L+ ++   E     +LLS E D +DA+L VHA
Sbjct: 62  EDLQTLYELTQEAGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDGSDAFLTVHA 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DWA ML RMY RWAE+R F  E L+  + +E G+KS TL I+G  AYG+LK 
Sbjct: 122 GAGGTEACDWAQMLTRMYLRWAERRGFSVETLDELEADE-GLKSITLQIRGDYAYGFLKA 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRL+RISP+D+N+RRHTSFSS++V+PV+DD+IE+ I   D R+DTYRA GAGGQHV
Sbjct: 181 ETGVHRLIRISPFDANARRHTSFSSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVR+TH+PTG+VV CQ ERSQ  N+A A +ML+A+LYE    ++E+      + K
Sbjct: 241 NKTDSAVRLTHLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAEK 300

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             I WG QIRSY+ QPY MVKD RT  E  +   V+DGD+D F++  L 
Sbjct: 301 KGISWGNQIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFLK 349


>gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
 gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
          Length = 372

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 171/349 (48%), Positives = 235/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L +L ++T +P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL+LEE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSLEEGNHDMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|224373403|ref|YP_002607775.1| peptide chain release factor 2 [Nautilia profundicola AmH]
 gi|254790918|sp|B9L5Y7|RF2_NAUPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|223589806|gb|ACM93542.1| peptide chain release factor 2 [Nautilia profundicola AmH]
          Length = 367

 Score =  360 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 229/354 (64%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++  +  +   +    RL  +      P  W +   +  + +E+  +   +   K+
Sbjct: 12  ELENKIENIESILKPEKLEARLKEIEELENSPDFWNDPKTSAKVQKEKNAILRKLEKYKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  L DN  + ELA  E+D   L E  +++Q +K  +   + E +LS E D+ +A + +
Sbjct: 72  AKTALQDNKDMFELASMEEDEETLNEVFNDVQDLKKIIRDLEIEVMLSDENDAKNAIISI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA++L RMY R+AE+R +K E L+   G+EAGIK  + L+KG NAYG+L
Sbjct: 132 HPGAGGTESHDWASILYRMYLRYAERRGWKVEVLDYQAGDEAGIKDVSFLVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR+SP+DS  RRHTSF+S+ V P +DD IEIEI   D RID +RASGAGGQ
Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDPKDIRIDVFRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VV CQ +RSQHKNK  A  ML++KLYELEL+KR+        
Sbjct: 252 HVNKTESAVRITHIPTGIVVGCQTDRSQHKNKDMAMKMLKSKLYELELEKRKAEEEGKP- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K E+GWG QIRSYVL PYQ VKD R+N   +   D+LDGDLD+ ++  L  +K
Sbjct: 311 -KDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSRVDDILDGDLDEVIEDVLIAEK 363


>gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
 gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
          Length = 326

 Score =  360 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 159/323 (49%), Positives = 212/323 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E    W +   A+ ++ E   L       KE++ RL D   L   A E  D  +L + +
Sbjct: 1   MEAAGFWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLN 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L RI+ E+   +   +LSGE D+ + YL ++AGAGGTE+ DW  ML RMY RW +KRK
Sbjct: 61  QELFRIENELGELEIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDKRK 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +++  GE AG KS TL + G  A+G+ K E+GVHRLVRISP+DS SRRHTSF+S+
Sbjct: 121 WKCEVVDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D I+IEI+  D RIDT+RASGAGGQHVN TDSAVR+THIPTGVVV CQ +RSQ
Sbjct: 181 DVTPEITDDIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           ++NK   + +L++KLYE+E+ +RE+        K +IGWG QIR+YV  PY +VKD RT 
Sbjct: 241 NQNKEACFKILKSKLYEMEVMEREKKIKELGGEKMDIGWGSQIRNYVFHPYSLVKDTRTK 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           +E  +   V+DG LD F+ A L 
Sbjct: 301 VESANVQAVMDGSLDLFVNAYLK 323


>gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
          Length = 367

 Score =  360 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D +     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E    L  ++  ++  +  +LLSGE D  +A + + 
Sbjct: 73  RGRIDDLAVLFELAEEMDDPDTLAEAEAELTSVRKALDEMEVRTLLSGEYDEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ S  +EI ES+ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE Q++EE A +    
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERQRQEERAKMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWRK 363


>gi|315634626|ref|ZP_07889910.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
 gi|315476574|gb|EFU67322.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
          Length = 325

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 173/324 (53%), Positives = 230/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W +  +A+ L +ER  L+  ++ IK ++  L D   LLELA+E  D     E  
Sbjct: 1   MEQPDVWNDADKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + 
Sbjct: 61  AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ 
Sbjct: 121 FKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAA 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQ
Sbjct: 181 FVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK QA   L+AKLYELELQK+       E +K++IGWG QIRSYVL     +KDLRT 
Sbjct: 241 HKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323


>gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 327

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++      +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDITAYMATINAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 374

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 177/353 (50%), Positives = 243/353 (68%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  +   + G FD +   ++L+ +  +    + W +  +A+ +  ER  +++ ++    
Sbjct: 14  KVKDKYFEIRGYFDIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESELNTFSS 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ +L D   LLE+A EE + S+L E    L+ I+ E+   + +++LSGE D N+A + +
Sbjct: 74  IEQQLEDIETLLEIAEEESEESLLDEAESFLKNIERELNSLEVKTVLSGEFDKNNAIVTI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA ML+RMY RWAE++ F+TE L++ + EEAGIKSAT+LIKG  AYG L
Sbjct: 134 HAGAGGTESCDWAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIKGAYAYGLL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G HRLVRISP+DSN+RRHTSF  + V P +D+ I+IEI + D RIDTYRASGAGGQ
Sbjct: 194 RAEHGTHRLVRISPFDSNARRHTSFCGVIVVPEIDEDIDIEIKDEDLRIDTYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV CQ ERSQ +N+ +A  +L+A+LYELE QKREE       
Sbjct: 254 HVNKTDSAVRITHLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAEARG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSYV  PYQMVKD RT IE ++ + V+DG++D F++  L  K
Sbjct: 314 EHKTIAWGNQIRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLKQK 366


>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
          Length = 375

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 171/352 (48%), Positives = 241/352 (68%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++   L    D +   + +   +    +P  W +  +AK + ++R+ L + ++    +
Sbjct: 11  IKKRFEELSSSIDEEKIKKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDKLNTYTSL 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++    EE D       S+ L+ ++ +++  + E+ LS E D N+AYL + 
Sbjct: 71  KSRIKDLDEMVSELKEE-DLDTTLLISEELEAVEKDLKKFELETYLSDEMDINNAYLTIQ 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLRMYTRWAEK  ++ +  +I+  + AGIKSATL IKGP AYG+LK
Sbjct: 130 AGAGGTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIKGPYAYGYLK 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RRHTSF+S+ V P V++ + IEI E D RIDTYRASGAGGQ+
Sbjct: 190 SENGVHRLVRISPFDANARRHTSFASVLVVPEVNEDVNIEIKEEDLRIDTYRASGAGGQY 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TD+AVRITHIPTG+VV CQQERSQ +N+ +A  ML+A+LY+LELQK EE     E  
Sbjct: 250 VNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKIEEKKKSLEGP 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG +IRSY+ QP Q+VKDLRT  E  +   V+DG++D+F++A L  K
Sbjct: 310 KTDIGWGYKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYLRKK 361


>gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
 gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
          Length = 340

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 172/336 (51%), Positives = 225/336 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    +  +P  W +   A+ ++ E      A     E+ D L +  +LLE+  E
Sbjct: 1   MEEDIAEAENRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + QE +     +  ++   +   LL G  D N+A +E+H GAGGTESQDW +MLL
Sbjct: 61  EPDDEMEQELATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWA+KR F+ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWADKRGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            +RRHTSF S+ V P +DD+I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG
Sbjct: 181 ANRRHTSFCSVDVMPELDDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
            VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  
Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 301 PYSMVKDHRTNFETGNVQAVMDGDIDGFIDAYLKQK 336


>gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
 gi|259585260|sp|C5BYB6|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
          Length = 374

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 223/353 (63%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R++ L+     P LW +   A+ +     H  + +  +  +
Sbjct: 12  LRGTLEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   L++LA EEDD   L E    L +I+  +   +  +LL+GE DS +A + + 
Sbjct: 72  RSRIDDLETLVQLAAEEDDADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE++ + T+ L+    EEAG+KSAT  +K P A+G L 
Sbjct: 132 SGAGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPETDIRIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L +Q+ E       + 
Sbjct: 252 VNTTDSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LAMQEEENAKKKELAG 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+RSYVLQPYQMVKDLRT  E  +PS V DGD+DDF++A +  ++
Sbjct: 311 DVKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 363


>gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium
           efficiens YS-314]
          Length = 389

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 219/353 (62%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + +    R+  L  +  DP LW N   A+ +  E  H+   +  + E
Sbjct: 33  ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 92

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  I+ ELA EE D + L    + L  ++  VE  + +++LSGE D+ +A + +
Sbjct: 93  LRQRLDDLPIMYELAEEEGDDTSL--VDEELADLRTGVEALEVKTMLSGEYDAREAVINI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 151 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I +S+ R+D YR+SG GGQ
Sbjct: 211 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 270

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 271 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKR-QEERAEMDALG 329

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D  ++A +  +
Sbjct: 330 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 382


>gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262]
 gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262]
          Length = 327

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  +  E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYVATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
 gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
          Length = 342

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 231/329 (70%), Positives = 280/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP LW +  EA+ LMRERQ LD+ IS ++  + +L DN+ L+EL  EE D +I+
Sbjct: 1   MNNKAEDPSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L++++ +   KQ E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  SEAEEALRQLRNDAAKKQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVD+SI+++I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ
Sbjct: 181 FSSIWVYPVVDESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA+LYE EL+KREE AN   +SKTEIGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +E TSP DVLDG+L +FM+A LA +
Sbjct: 301 LRTGVESTSPGDVLDGELSEFMEAALAHR 329


>gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans]
 gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas
           arsenicoxydans]
          Length = 325

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 173/323 (53%), Positives = 231/323 (71%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            EDP +W +   A+ L +E++ L+  +  + ++   L D   L E+A EE+D   +    
Sbjct: 1   MEDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            + Q +   VE  +F  + SG  D+N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ 
Sbjct: 61  ADTQELLKTVEGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRYCERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E LE  DGE AGIK+ATL ++G  AYG L+ E GVHRLVR SP+DS + RHTSFSS+
Sbjct: 121 FKVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHTSFSSL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+TH P+G+VVQCQ +RSQ
Sbjct: 181 FVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+NKA+AW+ML+AKL+ELE++ R       E SKT++GWG QIRSYVL     +KDLRTN
Sbjct: 241 HRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIRSYVL-DQSRIKDLRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   VLDGDLDDF+ A+L 
Sbjct: 300 FETGNTKAVLDGDLDDFIAASLK 322


>gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 327

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  +  E  
Sbjct: 1   MLDPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++      +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
 gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
          Length = 374

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 194/352 (55%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP LW +   A+ LMRERQ L +A+     I
Sbjct: 12  IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAMGNYDSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E+D  ++ E    L ++  +   K+ E+LL GEAD ND +LE++
Sbjct: 72  NQELSDNIELIELGEMEEDAEVVAEAEAALVKLADKAAKKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWANML RMY RWAEK+ +K E      G+EAGIKSA+  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRLDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAIKALKSRLYQMELDKRSTLVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M ATLA+ 
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMAATLAMD 362


>gi|330836506|ref|YP_004411147.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
 gi|329748409|gb|AEC01765.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
          Length = 369

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 226/353 (64%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  +   +    D     +++  L  KT  P  W +  +A+    +   L ++    ++
Sbjct: 11  EIKEEAYTVWRRLDSTGIEKQIQELEAKTTLPDFWNDKEKAEKTFSDLSSLKDSFFPWRD 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D   L++L   EDD S++QE    +  I+ E    + ++LLS   D ND +L +
Sbjct: 71  LKKRIDDVGDLIDLYANEDDESLVQELDSQILDIEKEFHPLKVKTLLSQRFDKNDCFLSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+ DWA ML+RMY RW E+  FK+E L++ + +E GIKS T+ + G  A+G+L
Sbjct: 131 HAGAGGTEASDWAAMLMRMYLRWCERNGFKSEILDMQE-DEGGIKSTTIRVSGQYAFGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DS  RRHTSF+S++  PV+DD IEI+I   D R+DTYRA GAGGQ
Sbjct: 190 KGEAGVHRLVRISPFDSQKRRHTSFTSVYASPVIDDEIEIDIKPEDIRLDTYRAGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH  +G+VVQCQ ERSQ  NK  A+ MLR++LYE   +K+E+       
Sbjct: 250 HVNKTDSAVRITHFESGIVVQCQNERSQFMNKEVAFKMLRSRLYEYYKEKQEQEHQKTAI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K  I WG QIRSYV QPY MVKD RTN +  +   V+DGD+DDF++  L   
Sbjct: 310 AKKGITWGSQIRSYVFQPYTMVKDHRTNCQVGNIQAVMDGDIDDFIEQFLQWD 362


>gi|149194096|ref|ZP_01871194.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
 gi|149136049|gb|EDM24527.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
          Length = 364

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 238/354 (67%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  +  +   D   +RL  +     DP+ W +   +  + +E+  +   +   K+
Sbjct: 12  ELENKLKNIESILKPDELQKRLDEITQMENDPNFWNDPKNSAKIQKEKNAILRKLEKYKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ L DN  + ELA  E+D   L E  ++++ ++  +   + E +LSGE D  +A + +
Sbjct: 72  AKNSLQDNKDMYELATMEEDEETLNEVFNDVKELEKIIRDLEIEVMLSGENDDKNAIITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+AE+R +K + L+   G+EAGIK AT+L+KG NAYG+L
Sbjct: 132 HPGAGGTESHDWASMLYRMYLRYAERRGWKVDILDYQAGDEAGIKDATILVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR+SP+DS  RRHTSF+S+ V P +DD IEIEI E D RID YRASGAGGQ
Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDEKDIRIDVYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VV CQQ+RSQHKNK  A+ ML++KLYELEL+KR+        
Sbjct: 252 HVNKTESAVRITHIPTGIVVSCQQDRSQHKNKEMAFKMLKSKLYELELEKRKAEEEGKP- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K E+GWG QIRSYVL PYQ VKD R+N   +   D+LDGDLD+ ++  L  ++
Sbjct: 311 -KDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSKVDDILDGDLDEIIEDVLISQQ 363


>gi|282875665|ref|ZP_06284536.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|281295692|gb|EFA88215.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|329723235|gb|EGG59765.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU144]
 gi|329736827|gb|EGG73092.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU028]
 gi|329737925|gb|EGG74149.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU045]
          Length = 333

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 219/327 (66%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP  W +  +A+ ++ +   L + ++   ++ + + D     EL  EE D  +  E 
Sbjct: 1   MMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ 
Sbjct: 61  EEEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY M+KD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DG++  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGEIGPFIEAYLRKE 327


>gi|27467454|ref|NP_764091.1| peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251810188|ref|ZP_04824661.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|293368216|ref|ZP_06614845.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27314997|gb|AAO04133.1|AE016745_232 peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251806240|gb|EES58897.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|291317639|gb|EFE58056.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 332

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 219/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ +   L + ++   ++ + + D     EL  EE D  +  E  
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+  
Sbjct: 61  EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY M+KD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DG++  F++A L  +
Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326


>gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS]
 gi|166225109|sp|A3PWV0|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           JLS]
          Length = 371

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 220/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D    R+  L  +  DP+LW +   A+ +  E  H  N +  ++E+
Sbjct: 12  LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L E+A EE+         E    L ++++++E  +  +LLSGE D  +A +
Sbjct: 72  RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I++ E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL   +  + E  A   
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKK-QEERAALDA 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 311 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365


>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
          Length = 368

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG ++RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
          Length = 387

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 219/353 (62%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + +    R+  L  +  DP LW N   A+ +  E  H+   +  + E
Sbjct: 31  ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 90

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  I+ ELA EE D + L    + L  ++  VE  + +++LSGE D+ +A + +
Sbjct: 91  LRQRLDDLPIMYELAEEEGDDTSL--VDEELADLRTGVEALEVKTMLSGEYDAREAVINI 148

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 149 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 208

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I +S+ R+D YR+SG GGQ
Sbjct: 209 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 268

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 269 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKR-QEERAEMDALG 327

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D  ++A +  +
Sbjct: 328 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 380


>gi|294055147|ref|YP_003548805.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
          Length = 386

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 162/356 (45%), Positives = 226/356 (63%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++R+   +    D    ++ +  L  +  +P  W +   A+ ++ E   L  A++  + 
Sbjct: 14  EITRRAGHIWRYLDGVKKLEEIEALEAQMAEPTFWDDQQAAQKVIAEANRLKAAVNPCRA 73

Query: 62  IQDRLCDNLILLELALE---EDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
               + D   +LEL  E   + D +   QE  D +  +  +++  +  S L+G  DS +A
Sbjct: 74  FNAEVDDLQAMLELVDEMGGDPDAAAYEQEVLDAVHALLPKLDALELASFLTGPHDSCNA 133

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L +HAGAGGTES DWA+MLLRMYTRW E+  F  +  +I  GEEAGI SAT+ I+GPNA
Sbjct: 134 LLTIHAGAGGTESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATIRIEGPNA 193

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+ K E+GVHRLVRISP+DSN+RRHTSFSS+ V   ++D I+++I ES+ R D YRASG
Sbjct: 194 YGYAKAERGVHRLVRISPFDSNARRHTSFSSVDVIAEIEDDIDLDIPESEIRTDVYRASG 253

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN T+SAVR+THIPT +VV CQ ERSQ KNKA A   L+++LYE  L ++     
Sbjct: 254 KGGQHVNRTESAVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKMLDEKRSEME 313

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                K +I WG QIRSYV QPYQ+V DLRT +++ +   V+DG+LD F+ A L  
Sbjct: 314 KFYGEKGDIAWGNQIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHAWLRA 369


>gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 332

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 218/324 (67%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ ++ +   L + ++   E+++ + D     EL  EE D  +  +  
Sbjct: 1   MTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            N+   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ 
Sbjct: 61  QNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML+AKLY+L+L+++E         + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N E      V+DG++  F+++ L 
Sbjct: 301 NEETGKVDAVMDGEIGPFIESYLR 324


>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
 gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
          Length = 368

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISPYD+  RR TSF+ + + PVV+ +  +EI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPYDNQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|256787399|ref|ZP_05525830.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|19864260|sp|Q53915|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
          Length = 368

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
 gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 366

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 182/352 (51%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++L+ L   FD     +R + L+ +   P  W +   AK +  E    ++ +  ++E+
Sbjct: 11  LSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRLKLMEEL 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D+  LLELA  E D  +L+E    L+ I+  +E ++   L +GE D  DA L ++
Sbjct: 71  RGRLEDSSELLELA--EGDRELLEEVERELEGIERRIEEQEVARLFTGEYDEGDAILTIN 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG +SQDWA ML RMY RWAE+R F  E +E  +GEEAGIKSAT  + GP A+G L 
Sbjct: 129 SGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSGPYAFGLLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++SRRHTSF+S+ V P +DD++E+EI E D ++DTYRASGAGGQH
Sbjct: 189 AERGVHRLVRISPFDASSRRHTSFASVAVAPAIDDAVEVEIDEKDLKVDTYRASGAGGQH 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VVQCQ ERSQH+N+  A  +L+A+L+ELE +KRE+        
Sbjct: 249 VNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQEIAAQSGE 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EIGWG QIRSYVL PY+MVKDLRT  E      VLDGDLD F+ A L  +
Sbjct: 309 KAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYLKRR 360


>gi|307822369|ref|ZP_07652601.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
 gi|307736935|gb|EFO07780.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
          Length = 347

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 175/343 (51%), Positives = 248/343 (72%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E+P +W N  EA+ L +ER  L+  ++ I +++  L D 
Sbjct: 3   LGGIFDFDVKSERLVEVLRELENPKIWDNPEEAQALGKERGQLEVIVNTINDLERGLSDA 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL +A+EEDD   ++   D+L+  +  V   +F  + SG+ D+N+A+L++ +G+GGTE
Sbjct: 63  EELLLMAVEEDDEETVETVVDDLEHFEKRVADLEFRRMFSGQMDANNAFLDIQSGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+++ RMY RW E++ FKTE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHR
Sbjct: 123 AQDWASIIERMYLRWGEQKGFKTELIEESQGDVAGIKSATIKFEGEYAFGWLRTETGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++V P +DD I+I+I+ +D R+D YRASGAGGQH+N T+SA
Sbjct: 183 LVRKSPFDSGNRRHTSFASVFVSPEIDDDIDIDINPADIRVDVYRASGAGGQHINKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQHKN+  A   L+AKLYELE++KR E A   E +K++IGWG
Sbjct: 243 VRMTHNPTGIVVQCQSDRSQHKNRDTAMKQLKAKLYELEMRKRSETAQALEDTKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRTN+E  +   VLDGDLD F++A+L 
Sbjct: 303 SQIRSYVL-DQSRIKDLRTNVETGNTQAVLDGDLDQFIEASLK 344


>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
 gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
          Length = 368

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|317493835|ref|ZP_07952252.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918162|gb|EFV39504.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 320

 Score =  358 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 175/318 (55%), Positives = 222/318 (69%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  ++ I ++   L D   LLELA+E DD     E    L ++
Sbjct: 2   WNEPERAQALGKERSSLEEIVNTINQMTQGLDDVSGLLELAIEADDEETFNEAVVELDQL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             ++   +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRM+ RWAE + FKTE +
Sbjct: 62  DAKLAQLEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWASMLLRMFLRWAEAKGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DGE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP V
Sbjct: 122 EESDGEVAGLKSATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q
Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   L+AKLYE E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMRQLKAKLYEYEMQKKNAEKQVMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDRFIEASLKA 318


>gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 348

 Score =  358 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 176/341 (51%), Positives = 235/341 (68%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD      ++  LN K  D   W N   A+ ++RE+ H  + I    ++   + +   L
Sbjct: 4   LFDLSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDL 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++L   EDD S   +   +L+ I+      + E+LL+GE DSN+  + +HAGAGGTE+QD
Sbjct: 64  IDLMEMEDDYSFYGDLKLDLENIEKLSNDFKLETLLNGEYDSNNCIISIHAGAGGTEAQD 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+ML RMY R+AEKR F+ E L++   EEAGIKS TLLI G NAYG+LKGE+GVHRLVR
Sbjct: 124 WASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLVR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+N RRHTSF+S+ VYP +DD  E+EI   D +IDTYR+SGAGGQHVNTTDSAVRI
Sbjct: 184 ISPFDANKRRHTSFASLDVYPQLDDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ ERSQ +N+ +A NML+AKL  L  ++++E     + + ++I WG QI
Sbjct: 244 THIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYV QPY +VKD RTN E    + V+DG LD+F+ + L +
Sbjct: 304 RSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYLQL 344


>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
 gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
          Length = 371

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
 gi|189040002|sp|A9BHH8|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
          Length = 366

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 236/350 (67%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L  +F+ D   + +  L+ +  +P+ W +   AK + +  Q+L + I   K+
Sbjct: 12  ELKENFEDLKDVFNIDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++   +  I +EL+  EDD S+  +    L+ I+ ++   +   LLS E D  +A+L +
Sbjct: 72  LENDFEELEIAVELS--EDDPSMTAQVEAILKVIEKKIGSFRLRMLLSEEYDDANAFLSL 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWA+K  +  E ++  +G+EAGIKSAT+ I GP AYG L
Sbjct: 130 HPGAGGTESQDWASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+SI V P  D+++EIEI+  D +IDTYR+ GAGGQ
Sbjct: 190 KYESGVHRLVRISPFDANGRRHTSFASISVMPEFDENVEIEINPDDLKIDTYRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV  Q ERSQH+NKA A  +L+AKLYELE QK+ E       
Sbjct: 250 HVNKTDSAVRITHLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYVL PY +VKDLRT  E ++   VLDG++D+F++  L
Sbjct: 310 EVKDISWGNQIRSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIEEEL 359


>gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064]
 gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes 1816]
          Length = 327

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD+F+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDEFINAYLRSR 325


>gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
 gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 157/341 (46%), Positives = 228/341 (66%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D    R+S ++  +  P+ W +  +A+ L++E+  L+ ++    +    L D  
Sbjct: 27  GGIFDLDRKRSRISLIDRDSTLPNFWDDNTKAQALLKEKSTLEASVGAFDKALRGLDDAQ 86

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+ELA E +D +  QE    L  ++ ++   +   +LSGE D ++ +++++AGAGGT+S
Sbjct: 87  TLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGAGGTDS 146

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML+RMYTR+ E+R ++ E  ++  GEEAG K+ +L I+G  AYG+LK E GVHRL
Sbjct: 147 MDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEVGVHRL 206

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D  +   R  GAGGQ VN T S  
Sbjct: 207 VRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTA 266

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           ++ H+PT +++ CQ ERSQ  NK  A+ +LRA+LYELEL+KRE   +  E+ K +I +G 
Sbjct: 267 QLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKDISFGS 326

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL PY+MVKDLRT +E  +   VLDGDL+ F+ A L
Sbjct: 327 QIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 367


>gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
 gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
          Length = 326

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 162/321 (50%), Positives = 217/321 (67%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  +  +L  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQAVINEANALKDMVGRFRQLDETFENLEMTHDLLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR+FK E
Sbjct: 65  TLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRRFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG+++ F+ A L  +
Sbjct: 305 NVQAVMDGEINPFIDAYLRSR 325


>gi|256851470|ref|ZP_05556859.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260660891|ref|ZP_05861806.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|282933470|ref|ZP_06338846.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297206285|ref|ZP_06923680.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
 gi|256616532|gb|EEU21720.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260548613|gb|EEX24588.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|281302401|gb|EFA94627.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297149411|gb|EFH29709.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
          Length = 332

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 155/325 (47%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N   A+ L+ E   L        ++     D    LEL  EE D  +  E  
Sbjct: 1   MADPDFWNNQESAQKLISETNKLKEKRDHFNDLAQAFSDEETALELLKEEPDDDLQVEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+++K      +   LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E   
Sbjct: 61  TDLEKLKDSFHQYELNLLLSGKYDANNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FTFEIDDYEPGDEAGVKSVSILIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A N LRAKL++LE +K+ +     +  + +I WG QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +  + V+DG LD+ + + L  +
Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325


>gi|254831068|ref|ZP_05235723.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
          Length = 327

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
 gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
          Length = 332

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 154/324 (47%), Positives = 204/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ +   L        ++Q    D    LEL  EE D  + +ET 
Sbjct: 1   MAQPDFWNDQEKAQKLINDNNLLKEKRDSFLKLQKGYEDVSTALELLREEPDADLQKETE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L  ++ E    + + LLSG+ D+++A LE+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  NDLANLQEEFHNYELDLLLSGKYDNHNALLEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
 gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
          Length = 361

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 149/344 (43%), Positives = 221/344 (64%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      ++S L      P+ W +   A++ ++E   L + +  +   Q  L D +
Sbjct: 12  RTIFDVPALQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAV 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D S+LQE SDNL+++  ++   + E LLSG  D N A L ++AGAGGT++
Sbjct: 72  AALELVELEPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE+  +K    E+ +G+EAGIKSATL I G  AYG+L+ E+G HRL
Sbjct: 132 QDWAEMLLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +D S+++EI + D  I T R+ G GGQ+VN  ++AV
Sbjct: 192 VRISPFNANGKRQTSFAGVEVMPQLDHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  +++ +          E  WG 
Sbjct: 252 RIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADIRGDAVEAAWGT 311

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIR+YV  PY++VKD+RT +E  +   V++G+LD+F++A L  +
Sbjct: 312 QIRNYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYLRQE 355


>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 368

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 336

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 164/334 (49%), Positives = 232/334 (69%), Gaps = 1/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L ++T D +LWQ+  +A+ +++E   + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++ K+ + L + EAD+ND +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +G+  GIKSA + I G  AYGW K E G+HRLVRISP+D+NS
Sbjct: 122 IRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDANS 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF SI V PV++DSI+I + E   +IDTYRASGAGGQHVN T+SAVR+THIPTGV+
Sbjct: 182 KRHTSFVSIGVTPVIEDSIDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTGVI 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY+++L+K+E+        K  IGWG QIRSYV+ PY
Sbjct: 242 VQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QMVKDLRT  E  + + + DG++D F+   L  K
Sbjct: 302 QMVKDLRTGYEVGNINSIFDGNIDCFIVNVLTNK 335


>gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 337

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 170/337 (50%), Positives = 237/337 (70%), Gaps = 1/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  L+++  + +LWQ+  +A+ +++ER  + + I    +++    D++ L+  A++
Sbjct: 1   MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAID 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D     E    L +++  ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW  ML+
Sbjct: 61  ENDEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLM 120

Query: 139 RMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           RMYTRWAE    FK E +E  DG+  GIKS T+ I G  AYGW K E GVHRLVRISP+D
Sbjct: 121 RMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFD 180

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPT
Sbjct: 181 ANGKRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 240

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           GVV QCQ  RSQHKNK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+
Sbjct: 241 GVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVM 300

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQMVKDLRT  E  + + V DG++D F+ + L +K
Sbjct: 301 HPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 337


>gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 364

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL+ +++ +  +   +   +RL  +    +DP  W +   A  + +E+  L++ ++   +
Sbjct: 12  KLTTKVDNIAQIIKPEEIAKRLGEIEAIEQDPEFWNDAKRAAEMQKEKTALNSLLNRYTK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ + D + L E+A  E+D + ++E  ++ QR++  +   +   +LSGE D+ +A + +
Sbjct: 72  AKNVVSDAVDLYEMANAENDETTIEELFNDAQRVEDHITNLEIAMMLSGENDTKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+  FK E L+  +GEEAGIK  + +I G NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERSGFKVEVLDYQEGEEAGIKDVSFIISGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+D+N++RHTSFSS+ V P VDD I+I + + D ++DTYRASGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFSSVMVSPEVDDDIDIVLEDRDLKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITH+PTG+VVQCQ +RSQHKN+A A  ML+++LYELEL+K++  A     
Sbjct: 252 HVNKTDSAIRITHMPTGIVVQCQNDRSQHKNRASAMKMLKSRLYELELEKQQ--AEKDGI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+NI  +  + +LDGD+   ++  L  +K
Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDNRSNIAYSQVNAILDGDISKVIEDVLIAQK 363


>gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS]
 gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS]
 gi|123070429|sp|Q1BBL5|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166225110|sp|A1UDD2|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           MCS]
 gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           KMS]
          Length = 371

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 221/355 (62%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D    R+  L  +  DP+LW +   A+ +  E  H  N +  ++E+
Sbjct: 12  LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L E+A EE+         E    L ++++++E  +  +LLSGE D  +A +
Sbjct: 72  RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I++ E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL   + Q+     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKKQEERAELDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +       WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365


>gi|307297404|ref|ZP_07577210.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916664|gb|EFN47046.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 370

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 162/347 (46%), Positives = 230/347 (66%), Gaps = 2/347 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + + +    D +   ++L  +  +  DP +W +  EA  L RE Q   + I  +++
Sbjct: 12  ELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYRSTIELLRD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++      I +EL+ E  D S ++   + ++  + +V   +   LLSGE D N+ ++ +
Sbjct: 72  VEEEFESIEIAVELSGE--DESYVKHVEELVRSAEKKVREFELTILLSGEYDINNCFISI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+ML+RMY RWAE  +FK   ++   GEEAGIKS T+ + GP+AYG +
Sbjct: 130 HPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPHAYGKM 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+S+ V+P +D+  EIEI   D +IDTYR+ GAGGQ
Sbjct: 190 KFEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDEVPEIEIRPEDLKIDTYRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV CQ ERSQH+NKA A  ML AKL+E+E++K+         
Sbjct: 250 HVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSEKLKLMG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            + EI WG QIRSYV QPY +VKD RT+ E      V++G++D+F++
Sbjct: 310 DQKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIE 356


>gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 335

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  + +LWQ+  +A+ +++ER  + + I    +++    D++ L+  A++E+D
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E    L +++  ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW  ML+RMY
Sbjct: 62  EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           TRWAE    FK E +E  DG+  GIKS T+ I G  AYGW K E GVHRLVRISP+D+N 
Sbjct: 122 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            QCQ  RSQHKNK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QMVKDLRT  E  + + V DG++D F+ + L +K
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 335


>gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae NTUH-K2044]
 gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
 gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
          Length = 320

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 173/318 (54%), Positives = 220/318 (69%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  + ++   L D   LL+LA+E DD     E    L  +
Sbjct: 2   WNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAVAELDTL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +
Sbjct: 62  EEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP V
Sbjct: 122 EESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +D I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK Q
Sbjct: 182 EDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDG LD F++A+L  
Sbjct: 301 QAVLDGSLDQFIEASLKA 318


>gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4]
 gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4]
          Length = 368

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 156/352 (44%), Positives = 217/352 (61%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D D   +R+  L     DP LW +   A+ +  E  ++   +   +E+
Sbjct: 12  LDATMTTVEKVLDIDELARRVDELEQMAADPDLWNDQDRAQKVTSELSYIQADLRRCREL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA EE     ++E       ++ +VE  + +++LSGE D  +A + + 
Sbjct: 72  RQRIEDLPLMYELAEEEG-GDAVEEADAERASLREDVEAMEVKTMLSGEYDQREAVVNIR 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAEK   K E  +    EEAGIKSAT ++K P  YG L 
Sbjct: 131 AGAGGVDAADFAEMLMRMYVRWAEKNGHKVEVYDTSYAEEAGIKSATFIVKDPYMYGTLS 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+    IE+ E++ R+D YR+SG GGQ 
Sbjct: 191 VEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGGQS 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  + E  A     S
Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKR-QEERAAMDALGS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 310 GGNASWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFIEAGIRWR 361


>gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5]
 gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5]
          Length = 373

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 224/353 (63%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   ++ + L  +   P LW +  +A+ +  +  +++  I+ + ++
Sbjct: 13  LDATLRNIEAVLDLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEITKLGDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LLELA  EDD   L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRLDDAGVLLELAQAEDDPGALTEVESEITGLTKAIQEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PV + +  I+I E++ R+D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L E + Q+ EE     ++ 
Sbjct: 253 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERKRQEEEEKLAGLKTG 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            T   WG Q+RSYVL PYQMVKDLRT  E  +PS V DGDLD F++A +  +K
Sbjct: 313 STS-SWGDQMRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIEAGIRWRK 364


>gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1]
 gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum
           reducens MI-1]
          Length = 332

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 156/319 (48%), Positives = 213/319 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W ++  ++ + ++   L + ++    ++  L D  ++LEL  EE D  + +E S  L 
Sbjct: 5   GFWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQEEQDPLLEEEFSSELS 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +   +E  + E +L+G  D  DA L +H GAGGTESQDWA MLLRMYTR+ E   +K E
Sbjct: 65  TLTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHNYKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L++  G+EAGIKSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+ V P
Sbjct: 125 ILDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHTSFASVDVLP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +VDD +E+ I   D RIDTYRA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ  N+
Sbjct: 185 LVDDEVEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTTNR 244

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  +L++KL +LELQK+E+        + +I WG QIRSYV  PY + KD RT  E  
Sbjct: 245 QAAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYSLAKDHRTGEETG 304

Query: 334 SPSDVLDGDLDDFMKATLA 352
           + + V+DG++  F+ A L 
Sbjct: 305 NVNAVMDGNIGQFVTAYLK 323


>gi|16804547|ref|NP_466032.1| peptide chain release factor 2 [Listeria monocytogenes EGD-e]
 gi|16411997|emb|CAD00587.1| prfB [Listeria monocytogenes EGD-e]
          Length = 327

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
 gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
          Length = 375

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 193/352 (54%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  +    D + A  RL   N + EDP LW N   A+ LMR+RQ L + IS +  +
Sbjct: 12  IEKSITLVAQRMDRETASYRLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVDAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  ++ E    L+ ++     K+ E+LL GEAD ND +LE++
Sbjct: 72  ERDLRDNIELIEMGEAEGDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA++L RMY RWAEK+ +  E      GEEAGIKS +  I G NAYGWLK
Sbjct: 132 SGAGGTESCDWASILARMYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE+ + D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVQDKDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV   Q +SQH+N+  A   L+++LY++EL +R    N    S
Sbjct: 252 VNTTDSAVRITHLPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQIELDRRNAAINEAHES 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K   GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+ 
Sbjct: 311 KGSAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDGFMAATLAMD 362


>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
 gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
 gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
 gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
          Length = 367

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H  + +  ++E
Sbjct: 11  ELDTTLTTVEKVLDVEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA EE     + +      +++ ++E  + +++LSGE D  DA + +
Sbjct: 71  LRSRLDDMAVLYELAEEEG-PEAVADAHAERAQLRTDIEAMEVKTMLSGEYDQRDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DWA ML+RMY RWAEKR +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RAGAGGVDAADWAEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+SG GGQ
Sbjct: 190 SIEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E + Q+     +  + 
Sbjct: 250 SVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRQEERAEMDALKG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRT  E  +PS VLDG++D F++A +  +
Sbjct: 310 DGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGIRWR 361


>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
 gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
          Length = 367

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 222/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D D    +++ L  +   P LW +  +A+ +  +  H    +  +  +
Sbjct: 12  LSATLASIEAVMDLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQGELRRVTAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D     E      +++ E+   +  +LLSGE D+ DA + V 
Sbjct: 72  RGRLDDLGVLYELAEDEGDEGSAAEADTERAKLREEISSLEVRTLLSGEYDARDALVTVR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A MLLRMY+RWAE+  +  +  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 AEAGGVDAADFAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRVTAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  +EI E + R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQTDHVEIDEKELRVDVYRSSGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL  LE Q++EE A +    
Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKL--LERQRQEEQAKMDALK 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +PS VLDG++DDF++A +  +K
Sbjct: 310 DSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWRK 362


>gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136]
          Length = 359

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 218/349 (62%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD       L  L  +   P  W N   A+  +    +L N I  ++E++ RL
Sbjct: 1   MAGSGGIFDVGKLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A  E+D +   E       ++  +   +   LL+GE D   A++ +H GAG
Sbjct: 61  EDFFVLGEIAQHENDLASWTEVEKEYHAMEKALSDFELAMLLTGELDKKGAFVTIHCGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+MLLRMY RW E+  +KTE ++   GEE G++SA   + G  A+G L  E+G
Sbjct: 121 GTESCDWADMLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS  RRHTSF+S+ V P VD+ I IE++E+D + +TYR+ G GGQ+VN  
Sbjct: 181 VHRLVRISPFDSAKRRHTSFASVDVTPEVDEDIGIELNEADIKFETYRSGGKGGQNVNKV 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVR+ H PTG++V CQ +RSQ KN+  A NML+AKLY+LE  K++         K ++
Sbjct: 241 ETAVRLIHEPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDV 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG QIRSYV QPYQMVKD RT  +  +  +V+DGDLD F++A L  +K
Sbjct: 301 AWGSQIRSYVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLRGRK 349


>gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1]
 gi|166225112|sp|A1T6D1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 368

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 215/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP LW +   A+ +  +  H    +  I+E+
Sbjct: 12  LDATLTTVERVIDVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA EE     + E    L +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RGRLEDLPVLYELAAEEGGSDEVAEADAELTKLREDIEAMEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V PV + +  IEI E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFADVEVLPVTETTDHIEIPEGDVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  +  
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDALKGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 312 GGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 362


>gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 368

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 235/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   +N L    D D    +L  LN K  +   W +   A+  ++E  H +  I  +K 
Sbjct: 14  EIESMVNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKS 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D +     LLE+   E D S  ++  D+L +++   E  +  +LL+ + D ND  L++
Sbjct: 74  LTDEISSLKDLLEIMEMEGDYSSYKDFKDDLIKLEKHAEDFKIATLLNDKYDDNDVILQI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDWA+MLLRMYTR+ E++ F  E L++   +EAGIKSATLLIKG + YG+L
Sbjct: 134 HAGAGGTEAQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGIKSATLLIKGDSCYGYL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+DSN RRHTSFSS+ VYP ++D  +++I   D +IDTYR+SGAGGQ
Sbjct: 194 KGEKGVHRLVRISPFDSNKRRHTSFSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTGVVVQCQ ERSQ +N+  A  +L+AKL  L  ++++E       
Sbjct: 254 HVNTTDSAVRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + ++I WG QIRSYV QPY MVKD RTN E      V+DG+LD F+ A L  K
Sbjct: 314 NYSQIAWGSQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLDPFINAYLQSK 366


>gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977]
 gi|238688912|sp|B1MEU8|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus]
          Length = 367

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 157/352 (44%), Positives = 219/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP+LW +    + +  +  H    +  ++E+
Sbjct: 12  LDTTLTTVERVLDVDGLRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA E +D S++ E      +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RSRLDDLPVLYELAEESEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE  K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDLRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+A+L E + Q+     +  +  
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARLLERKRQEERAEMDALKGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVLQPYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 GGS-SWGTQMRSYVLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWR 362


>gi|254458681|ref|ZP_05072105.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
 gi|207084447|gb|EDZ61735.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
          Length = 369

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 178/353 (50%), Positives = 235/353 (66%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L+ ++N + G+ + D    RL  +     D   W +   A  + +E+  L   +     
Sbjct: 12  NLNLKMNNITGVVEPDKLTSRLEEIEELENDQDFWNDADNAAKIQKEKTQLQRKLDKYSI 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +D + D L L E+A EE+D   ++    +   ++  +   + E LLSGE DSN+A L +
Sbjct: 72  AKDAITDALELYEMAKEENDEDSIELCFSDASDLEQLILNMEVEVLLSGETDSNNAILSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE+  F  E L+   G+EAGIK A++LIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWAEMLLRMYKRWAERHGFGVEVLDYQVGDEAGIKDASILIKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN++RHTSFSS+ V P +DD I I + + D RIDTYRASGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEIDDDINIVVEDKDIRIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHI T V+VQCQ +RSQHKNKA A  MLR++LYELEL    + A I   
Sbjct: 252 HVNKTESAIRITHIATNVIVQCQNDRSQHKNKATAMKMLRSRLYELEL--AAQKAEIAGI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K+EIGWG QIRSYV+QPYQ VKD R+N   ++ S +LDGD+D  ++  L  +
Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDKMIEGVLIAQ 362


>gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 368

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 153/350 (43%), Positives = 226/350 (64%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           ++ +   G  D ++  QRL  +  +   P  W +  +   +++E+  L+ ++S  +++  
Sbjct: 17  QRFSSFWGRLDLESQKQRLEEIEHELSRPGAWDSPEKLTPILKEKSGLEESVSKYEQLHS 76

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +    LE A  +    +LQ   D+L+ +  ++E  + E+LLSG+ D+N A + +H G
Sbjct: 77  LQEEVREWLEFADNDQSGEVLQALEDSLETLSRQLEKVELEALLSGKDDNNPAIVSIHPG 136

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDW  MLLRMYTRWAE + FK + L+   G+EAG+KS TL + G  AYG LK E
Sbjct: 137 AGGTEAQDWVEMLLRMYTRWAESKGFKLDYLDYLPGDEAGVKSVTLQVTGEYAYGLLKSE 196

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +G+HRL+RISP+D++ RRHTSF+S+ VYP V D I IE+ E D R+D ++ASG GGQHVN
Sbjct: 197 RGIHRLIRISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPGGQHVN 256

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SA+RITH+PTG+VVQCQ ERSQ +N+  A  +L+AKLY+ E++K E+      ++K 
Sbjct: 257 KTSSAIRITHMPTGIVVQCQSERSQRRNRDAALKILKAKLYDEEMKKLEDERQEKYAAKD 316

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            I WG QIR+Y L  Y++VKD R N E      VLDG++D  ++  L  +
Sbjct: 317 SIAWGSQIRTYTLHSYRLVKDHRNNTEIYDVDSVLDGNIDTLIRNYLLYR 366


>gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26]
 gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291]
 gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291]
          Length = 338

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 161/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ +
Sbjct: 8   EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 67

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 68  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336


>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
 gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
          Length = 378

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 161/355 (45%), Positives = 228/355 (64%), Gaps = 3/355 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D     ++ L  ++ DP LW +   A+ + R   +L+N ++ +  
Sbjct: 12  ELGSTLTGIEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   L ELA E DD     E    L+ ++ +++  +  +L+SGE D  +A + +
Sbjct: 72  LRQRLEDVATLYELAEEMDDADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DWA  L RMY RWAE+  + TE  E    EEAGIKS T  +K P AYG L
Sbjct: 132 NAQAGGVDAADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+  RR TSF+ + V PVV+ S  +E+ E+D RID YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A  +L+AKL  LE +++EE A + + 
Sbjct: 252 GVNTTDSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKL--LERKRQEEAAKMADL 309

Query: 302 S-KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +    WG QIR+YVL PYQ+VKDLRT +E  +P+ VLDG++D+F++A +   +
Sbjct: 310 RGEGTSSWGTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEIRWLR 364


>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           18P13]
          Length = 375

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 160/348 (45%), Positives = 233/348 (66%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           QL  LG +     A   L  L  +      W +  +++ +M++ + L+N +   + +  +
Sbjct: 17  QLKELGDVLQVARAQSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLNQK 76

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D + L++L +EEDD S  +E   +++  K E+E ++  +LL+GE D ++A L  HAGA
Sbjct: 77  LEDTIALIDLCMEEDDDSSNEEILQDVESFKEELEAEKLSTLLTGEYDGSNAILTFHAGA 136

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA ML RMY RWAE+  FK   L+  DG+EAG+KSA++L++G NAYG+LK E 
Sbjct: 137 GGTEAQDWAQMLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKSEA 196

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR+SP+D++ RRHTSF+++ V P +DDS+E++I   D ++D +R+SGAGGQH+N 
Sbjct: 197 GVHRLVRVSPFDASGRRHTSFAALEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHINK 256

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+THIPTG+VV CQ +RSQ +N+  A  MLR+KL E++ ++  E  +  +  + E
Sbjct: 257 TSSAVRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDIKGVQKE 316

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           I WG QIRSYV  PY + KD RT  E  + S V+DGDLD F+ A L  
Sbjct: 317 IAWGAQIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYLKA 364


>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
 gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
          Length = 369

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E    L  ++  ++  +  +LLSGE    +A + + 
Sbjct: 73  RGRIDDLAVLFELAQEMDDADTLAEAEAELVSVRKALDEMEVRTLLSGEYAEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI ES+ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVEIDESELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363


>gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
 gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
          Length = 359

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 149/345 (43%), Positives = 221/345 (64%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      ++  L  +   P  W++   A+ +++E   L   ++  ++ Q +  D  
Sbjct: 10  RTIFDLKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAA 69

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL  E +D ++L E  +NL  ++ E+   + + +LSGE D+  A L ++AGAGGT++
Sbjct: 70  AIAELLTEAEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW+EK+ +K    EI +G+EAG+KSATL + G  A+G+LK E+G HRL
Sbjct: 130 QDWAEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRL 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ + V P++ D+ ++++I E D  I T RA G GGQ+VN  ++A
Sbjct: 190 VRISPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETA 249

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+PTGV V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG
Sbjct: 250 VRIVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVEAAWG 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIR+YV  PYQMVKDLRTN E T    V+DGDLD F++A+L   
Sbjct: 310 NQIRNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASLRQD 354


>gi|256828464|ref|YP_003157192.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
          Length = 369

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 222/350 (63%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +        D     +RL+ +  +   P  W        +++E+  L++ +   + 
Sbjct: 13  QLDERFTDFWRRLDLRRNKERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRVDEWEA 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     + L  +E+A  E    +LQ   + L+ +  ++E  Q  +LLS   D ++A LE+
Sbjct: 73  LLQARDNALEWVEMASTEQTQEMLQALEEALEEMSAKLEAAQMRTLLSDPEDVSEAILEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY R+AE+  FK E L++  G+EAGIKS TL I GP AYG L
Sbjct: 133 HPGAGGTESQDWAEMLLRMYRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGPYAYGQL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+G HRL+RISP+DS+ RRHTSF+S+ VYP     IEIEI + D R+D +R+SG GGQ
Sbjct: 193 KGEKGTHRLIRISPFDSSGRRHTSFASVDVYPDAGQDIEIEIRDEDVRVDIFRSSGPGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+V QCQ E+SQHKNK  A  +L+A+LYELELQK          
Sbjct: 253 SVNTTDSAVRVTHIPTGLVAQCQNEKSQHKNKEAAMKVLKARLYELELQKIASERQAEYV 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K  I +G QIR+Y LQPY++VKD RT  + ++   VLDG++D F+   L
Sbjct: 313 AKGAIAFGSQIRTYTLQPYRLVKDHRTGTDTSNVDSVLDGNIDAFIHNYL 362


>gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 373

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 151/349 (43%), Positives = 218/349 (62%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           + +  L      D + +R+  L      P  + +   +K +  E   L   +S  +++Q 
Sbjct: 16  KAVKDLEEALAIDASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQG 75

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              D   +LE+  EE D +++ E  +++  +   V+  Q  ++L+GE D ++A L  HAG
Sbjct: 76  LYDDAETMLEMLDEEYDPAMIPEAEESVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAG 135

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GGTE+QDWA ML RMY +WA       E L+  DG+EAG+KSA++++KG NAYG LK E
Sbjct: 136 TGGTEAQDWAEMLYRMYNKWASNHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSE 195

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++IS  D  +  YR+SGAGGQH+N
Sbjct: 196 NGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDISPEDIEMQVYRSSGAGGQHIN 255

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+ H PTGVVV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + 
Sbjct: 256 KTSSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQN 315

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           EI WG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 316 EIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|254900353|ref|ZP_05260277.1| peptide chain release factor 2 [Listeria monocytogenes J0161]
          Length = 327

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 336

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+   
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+  E  ++L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML 
Sbjct: 59  DEDDSVQAELEESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSFSS+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 344

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 161/343 (46%), Positives = 230/343 (67%), Gaps = 1/343 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   ++LS L  + ++   W +   A+ + +E + + + I  ++ +Q +L D  +L
Sbjct: 3   LFDKEYLEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E+ +++DD     E  +N++ I+ E++    E LLSGE D N+A L +H G GGT++ D
Sbjct: 63  KEM-MDDDDEESAYEIINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAND 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  MLLRMYTRW EK+ +K E +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVR
Sbjct: 122 WTEMLLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+S+ V P +    +I+I   D ++DTYRASGAGGQH+N TDSAVRI
Sbjct: 182 ISPFNANGKRQTSFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTGVVVQCQ ERSQ  NK  A  ML+AKL EL+ +  +E          ++GWG QI
Sbjct: 242 THIPTGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQI 301

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RSYV  PY +VKD RTN+E ++ + V+DGDLD F+ + L   K
Sbjct: 302 RSYVFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLKSSK 344


>gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4]
 gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4]
          Length = 376

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 223/353 (63%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  +  + D +    +++ L  +   P LW NV EA+ +  +  H    +  + E+
Sbjct: 21  LTGKLTQIESVMDLEALRAQVAELEEQASSPTLWDNVEEAQKVTSQLSHRQAELRRVSEL 80

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D   + E   +L  +  +++  +  +LLSGE D  +A + + 
Sbjct: 81  RQRLDDLGVLYELAADEGDSGSMTEAEGDLADLAKDIDALEVRTLLSGEYDDRNAVVNIR 140

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  +I   EEAGIKSAT  +  P  YG L 
Sbjct: 141 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVFDISYAEEAGIKSATFKVTAPYVYGTLS 200

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V P V++   ++I E D R+D YR+SG GGQ 
Sbjct: 201 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDIPEKDIRVDVYRSSGPGGQS 260

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L  L+ +K EE A +    
Sbjct: 261 VNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAAAMKVLQARL--LQRKKEEERAEMDALK 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +K
Sbjct: 319 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPTAVLDGDIDGFLEAGIRWRK 371


>gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932]
 gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42]
 gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255]
 gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55]
 gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34]
 gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79]
 gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58]
          Length = 339

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 161/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ +
Sbjct: 9   EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 68

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 69  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337


>gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
 gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
          Length = 369

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 224/354 (63%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    +++ L+ +   P LW +  +A+ +        N +  I+ 
Sbjct: 11  QLRATLATISAVSDPEALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q R+ D  +L+E+A+E +D   L E  D    IK +++  +  +LLSGE D+ +A + +
Sbjct: 71  MQQRIDDLEVLVEMAVEGNDADTLHEAEDEYAAIKKDLDQLEVRTLLSGEYDAREAVVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 131 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI +++ R+D +R+SG GGQ
Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHVEIPDNEIRVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  LE Q  E+      +
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAEEKAKKKELA 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVLQPYQMVKDLRT  E  + + V DG +DDF++A +  ++
Sbjct: 310 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGIRWRR 363


>gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
 gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
          Length = 322

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 215/309 (69%), Positives = 260/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++I+ +++++  L DN  L+E+   EDD S++ E    L+ +  +V   Q +
Sbjct: 1   MRERQQLDDSINGVRKLEQDLVDNQELIEMGEMEDDQSVVDEAEGALKAMLEQVNKLQLQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND Y+E+++GAGGTESQDWA+MLLRMY RW E+  +K E +E +DGEEAGI
Sbjct: 61  SLLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGW+K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DDSI IEI+E
Sbjct: 121 KSATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYPVIDDSINIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 181 ADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+REE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E T+PSDVLDGDLD 
Sbjct: 241 EAELQRREEQANKDAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPSDVLDGDLDK 300

Query: 346 FMKATLAIK 354
           FM+ATLA +
Sbjct: 301 FMEATLAHR 309


>gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1]
 gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1]
          Length = 332

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 201/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W N  +A+ L+ E   L        ++Q    D    +EL  EE D  + +E  
Sbjct: 1   MAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYEDETTAVELLREEPDPDLQKEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  ++ +    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  ADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDTAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSI+I+I   D R+D YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E      V+DG L  F+ + L  
Sbjct: 301 HETADAQGVMDGKLQPFIYSYLQW 324


>gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
 gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
          Length = 331

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 157/324 (48%), Positives = 214/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+M++++   L        +++ ++ +  +L E+  E+ +  I  E  
Sbjct: 1   MSEPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKEDPEEEIHDELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++ E+E  +   LLSG  D   A LE+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  ERVHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E ++  DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+D+  +RHTSF SI
Sbjct: 121 YRIETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFCSI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P ++  I+IEI+  D +ID YRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ
Sbjct: 181 DIMPQLEGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNK QA  ML+ KLY+LE +K+          + +I WG QIR+YV  PY +VKDLR+ 
Sbjct: 241 FKNKDQAMAMLKTKLYQLEEEKKAAELAEIRGEQKDIAWGSQIRNYVFHPYSLVKDLRSG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   V+DGDLD FM A L  
Sbjct: 301 HETGNIGAVMDGDLDPFMDAYLKW 324


>gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
 gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
          Length = 329

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++              ++ + L +  ++LE+  EE D  +  E  
Sbjct: 1   MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|52425597|ref|YP_088734.1| peptide chain release factor 2 [Mannheimia succiniciproducens
           MBEL55E]
 gi|52307649|gb|AAU38149.1| PrfB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 325

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 171/324 (52%), Positives = 229/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W    +A+ L +ER  L+  ++ IK++   L D   LLELA+E +D     E  
Sbjct: 1   MEQPDVWNEPEKAQALGKERSALETVVNTIKKLDQGLEDVDGLLELAVEGEDEETFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + 
Sbjct: 61  TELDELEQQLAKLEFRRMFSGEHDACDCYIDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ 
Sbjct: 121 FKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAA 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQ
Sbjct: 181 FIYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK Q    L+AKLYE+ELQK+       E SK++IGWG QIRSYVL     +KDLRT 
Sbjct: 241 HKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323


>gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
 gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
          Length = 323

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 153/322 (47%), Positives = 219/322 (68%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL +EE+D    +E  
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK++
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKE 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++ + V+DGD+D+F+ A L
Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321


>gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB]
 gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas
           aromatica RCB]
          Length = 325

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 163/323 (50%), Positives = 227/323 (70%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            EDP +W +   A+ L RE++ L+N +  ++E+Q  L D   L ++  E+ D   L    
Sbjct: 1   MEDPKIWDDAKRAQELGREKKSLENIVLVLEEVQSGLNDGRELFDMGKEDGDEDTLLSVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +   ++ +V   +F  + +  +D    +LE+ AGAGGTE+QDWA+MLLRMY ++ EK+ 
Sbjct: 61  ADNAELEKKVAALEFRRMFNNPSDPMPCFLEIQAGAGGTEAQDWASMLLRMYLKYGEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E +E  +G+ AG+KSAT+   G  AYG L+ E G+HRLVR SP+DSN+RRHTSF+S+
Sbjct: 121 FTVEVMEESEGDVAGLKSATVKFTGDYAYGTLRTETGIHRLVRKSPFDSNARRHTSFTSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V+P VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VVQCQ +RSQ
Sbjct: 181 FVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+N+ +AW MLRA++YE EL+K++      E +K++IGWG QIRSYVL     +KDLRTN
Sbjct: 241 HRNRDEAWQMLRARIYEFELRKQQAEQQKLEDAKSDIGWGHQIRSYVL-DQSRIKDLRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   VLDGDLD F++A+L 
Sbjct: 300 HETGNTQAVLDGDLDPFIEASLK 322


>gi|238854884|ref|ZP_04645214.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|260664171|ref|ZP_05865024.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|282931596|ref|ZP_06337089.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|313472385|ref|ZP_07812877.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|238832674|gb|EEQ24981.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|239529755|gb|EEQ68756.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|260562057|gb|EEX28026.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|281304207|gb|EFA96316.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
          Length = 332

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 154/325 (47%), Positives = 208/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N   A+ L+     L        ++     D    LEL  EE D  +  E  
Sbjct: 1   MADPDFWNNQESAQKLISATNKLKEKRDHFNDLAQAFSDEEAALELLKEESDTDLQAEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ +K      +   LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E   
Sbjct: 61  SDLESLKDSFHQYELNLLLSGKYDTNNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FTFEIDDYEPGDEAGVKSVSVLIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A N LRAKL++LE +K+ +     +  + +I WG QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +  + V+DG LD+ + + L  +
Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325


>gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 372

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 232/349 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L  L  +T  P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL+L+E +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
 gi|81717933|sp|Q82D82|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
           MA-4680]
          Length = 368

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLSVLFEMAEEEDDPDTRAEAESELTAVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL +   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G+++ F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364


>gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa]
 gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa]
          Length = 488

 Score =  356 bits (914), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 155/352 (44%), Positives = 227/352 (64%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +   P LW + + A  + RE   L   +  ++ +
Sbjct: 124 IAQSIQVIKRRLQWKKLMVRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTL 183

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EEDD  +  E    L +++     K+ E+LLSGE DS   Y+EV 
Sbjct: 184 EQELLEHIDMIKLAREEDDNELESEMLKALLQMRRNSNEKEQEALLSGEQDSCPCYIEVQ 243

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++  +    ++   GE AGIK AT+ + G  A+G+ K
Sbjct: 244 AGAGGTESMDWAKMVMQMYKSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 303

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D    + I+ESD RI+ +RA GAGGQ
Sbjct: 304 AEAGVHRLVRISPFDSGKRRHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQ 363

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTG+   CQ ERSQH NK  A  +L+++L + E+ ++ ++      
Sbjct: 364 HVNTTESAVRIVHIPTGITATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQ 423

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+IGWG QIRSYVL PY+MVKDLRTN E T+P  VL+G++D F+ + L+ 
Sbjct: 424 SLTDIGWGNQIRSYVLHPYRMVKDLRTNYEVTNPDSVLEGEIDGFILSYLSA 475


>gi|319779400|ref|YP_004130313.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
 gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
          Length = 327

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 167/324 (51%), Positives = 239/324 (73%), Gaps = 1/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + EDP++W +  +A+ L +E++ L++ +  + E++  + D+  L  LALE++D S L   
Sbjct: 2   ELEDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDSTLIAI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            ++ ++   ++E  +F  + S  AD  + ++++  GAGGTE+QDWA+MLLR Y R+ E++
Sbjct: 62  EEDSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRYCERK 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FKTE LE   G+ AGIKSAT+ ++G  A+G L+ E GVHRLVR SP+DS + RHTSF+S
Sbjct: 122 GFKTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRHTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VVQCQ +RS
Sbjct: 182 LYVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+NKA+A +ML++KLYELEL+KR       E SK+++GWG QIRSYVL     +KDLRT
Sbjct: 242 QHRNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVL-DQSRIKDLRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N+E ++   VLDGDLD F++A+L 
Sbjct: 301 NVEVSNTQKVLDGDLDMFIEASLK 324


>gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
 gi|158448884|gb|EDP25879.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
          Length = 370

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 229/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D +N   R++ LN + E P  W +V  ++ + RE ++L + +   K+++
Sbjct: 15  KEPLEEVKSSLDIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQDLVDNYKKLE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +   D   L+ +A EE+D S++ E  + +   K E E  +   L + E D  +A L +H+
Sbjct: 75  NDYLDIDTLILMAEEENDSSLIPEIGEQIDIFKKEFEEYRINLLFTDEFDDCNAVLTLHS 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GGTES DWA+ML RMYTRWAEK     E L+  +G+EAGIKS T+ I GP+AYG+LK 
Sbjct: 135 GEGGTESCDWASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQINGPHAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP++S  +R TSF+S  V P ++  +EIEI + D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNSAGKRMTSFASCDVIPDIEQDLEIEIRDEDIRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH PTG+VVQCQ ERSQ  NK +A  ML++KLY L+ Q+  E  +      
Sbjct: 255 NKTSSAIRITHFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENLERISDIRGEV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T+ G+G QIRSYVLQPY MVKD RT+ E ++ S VLDGDLD FM A L  
Sbjct: 315 TDNGFGSQIRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYLKW 364


>gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 365

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 224/354 (63%), Gaps = 6/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L   L  +  + D D    R   L  +  DP LW +   A+ +  E  ++   +  +  
Sbjct: 11  NLDSTLTTIEKVIDLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVAS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R+ D  ++ ELA EE + +++    D L  ++  +   + +++LSGE D  +A + +
Sbjct: 71  LRERIDDLPVMYELAEEEGEPALVD---DELAALEESIGSLEVQTMLSGEYDEREAVVNI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K E  +I   EEAGIKSAT +++G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I +SD R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDSDIRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GE 300
            VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L++KL  LE +++EE A +   
Sbjct: 248 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNKASALGVLQSKL--LERKRQEEKAEMDAL 305

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +     WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D F+++ +  +
Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359


>gi|227832559|ref|YP_002834266.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790912|sp|C3PES4|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 368

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS  L  +  + D +   +R+  L  +  DP LW +   A+ +  E       +  +  
Sbjct: 11  ELSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D +  +     L+ +   +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRIEDLPVMSELAEEEGDEASQELVETELKELGAAIESLEVTTMLSGEYDEREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ +S+ R+D YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +  +
Sbjct: 310 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGIRWR 362


>gi|109897685|ref|YP_660940.1| peptide chain release factor 2 [Pseudoalteromonas atlantica T6c]
 gi|109699966|gb|ABG39886.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudoalteromonas
           atlantica T6c]
          Length = 348

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 184/346 (53%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GG FD+D   +RL  +N + E P +W     A+ L +E+  L+  +  I  ++   
Sbjct: 1   MHRFGGTFDYDQKNERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGC 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +   LLELA+EE D   L E   +L  +   +E  +F  + SG  D+ND Y+++ +G+G
Sbjct: 61  VEVEELLELAVEESDQETLDEAEKDLAELVSRLETLEFRRMFSGPNDANDGYIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+MLLRMY RW E   FKTE +E+ DG+ AGIKSAT+  +G  A+GWL+ E G
Sbjct: 121 GTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I  SD RIDTYRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PT +VVQCQ +RSQHKNKAQA   L+AKLYE E+QK+ E     E SK++I
Sbjct: 241 DSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQTMEDSKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 301 GWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIQASLK 345


>gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 370

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 171/349 (48%), Positives = 233/349 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L  L ++T  P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 13  EEDLKEMRVSLDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 72

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL+LEE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 73  SQWEDLKVLTELSLEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 132

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 133 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 192

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 193 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 252

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 253 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 313 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361


>gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
 gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
          Length = 336

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 154/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+   
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D SI  E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML 
Sbjct: 59  DEDDSIQSELEETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSFSS+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334


>gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
 gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
          Length = 375

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 179/352 (50%), Positives = 234/352 (66%), Gaps = 2/352 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++  L    D     + L+ +  ++ DP +W +   ++ LMRER+ L+  +S   +++
Sbjct: 13  RARVRDLREYLDSTRLKKDLARIEEQSSDPAIWADPARSQPLMRERKRLEGLLSDDADLE 72

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R  D     EL  E ++     E +  +  I+  +E  +  ++LS E D  +A + VH 
Sbjct: 73  RRSGDIDAYFELGREGENVE--PELAREIASIEQAIEKLESRTMLSEETDPLNAIVTVHP 130

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA ML+RMY RW E++ FKTE  EI DG+EAGIKSAT  I G  AYG L G
Sbjct: 131 GAGGTESQDWAEMLMRMYLRWGERQGFKTEINEIQDGDEAGIKSATFTITGDFAYGLLSG 190

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DS  RRHTSFSS++V P +DDSI I+I   D RIDTYR+ G GGQHV
Sbjct: 191 ETGVHRLVRISPFDSAKRRHTSFSSVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHV 250

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PTG+V  CQ ERSQHKNK +A  MLR++LYE EL K++ I+   E SK
Sbjct: 251 NTTDSAVRITHLPTGIVAGCQNERSQHKNKDKAMKMLRSRLYEFELDKKKAISRKLEDSK 310

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            EI +G QIRSYVLQPY+M KDLRT +E      VLDGDL+ F++  L +++
Sbjct: 311 LEINFGSQIRSYVLQPYRMAKDLRTRVEVGDVDRVLDGDLEPFIRGFLRMRR 362


>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
 gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
          Length = 368

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELTLVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE +E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 232/352 (65%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  ++ +     W   V RL  L+ +   P LW N + A  + RE   L   +  +K +
Sbjct: 110 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 169

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV 
Sbjct: 170 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 229

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K
Sbjct: 230 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 289

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ +RA GAGGQ
Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 349

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      
Sbjct: 350 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 409

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+I WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+ 
Sbjct: 410 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 461


>gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
 gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
          Length = 321

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 168/317 (52%), Positives = 224/317 (70%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L +ER  L+  +  I+ + +   D   LL+L + E+D   L++    +Q++
Sbjct: 2   WDDPERAQALGKERAALEAIVVSIETLTEGANDTADLLDLVVAENDVDSLEDIKSEIQKL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
              ++  +F  + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RW E + FKTE +
Sbjct: 62  LAILDELEFRRMFSGEVDENNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEAKGFKTELI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +
Sbjct: 122 ECSAGEVAGIKSATIKFDGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH+PTGVVVQCQ ERSQH+N+  
Sbjct: 182 DDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGVVVQCQTERSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +LR KLYELE+ KR E     E SK +IGWG QIRSYVL     +KDLRT +E ++ 
Sbjct: 242 AMKLLRGKLYELEMLKRSEKQQALEDSKADIGWGSQIRSYVL-DQSRIKDLRTGVETSNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDG +D F++A+L 
Sbjct: 301 QAVLDGAIDMFIQASLK 317


>gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
 gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
          Length = 398

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 218/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D D     ++ L+ +   P LW +   A+++     H  + +  + ++
Sbjct: 39  LRATYSSIENVTDVDALKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKL 98

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +E D   + E +  L  I+  +   +  +LLSGE D  +A + + 
Sbjct: 99  ASRIDDLEVLVELGQDEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIR 158

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T  ++    EEAG+KSAT  +K P A+G L 
Sbjct: 159 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 218

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI +++ R+D +R+SG GGQ 
Sbjct: 219 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 278

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  +++++      + 
Sbjct: 279 VNTTDSAVRLTHIPTGIVVSMQNEKSQLQNRAAAMRVLQSRLL-LVKKEQQDAEKKALAG 337

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S VLDGD+DDF+ A +  +
Sbjct: 338 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGIRWR 389


>gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
 gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
          Length = 373

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 160/355 (45%), Positives = 224/355 (63%), Gaps = 3/355 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   +  + L  +   P LW +  +A+ +  +  +++  I  +  
Sbjct: 12  ELDAILRNIEAVLDLDRLHEDKARLEEQASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +LLELA  EDD  +L E    +  +   ++  +  +LLSGE DS +A + +
Sbjct: 72  LRSRLDDARVLLELAEAEDDPGVLAEVETEIGALTKSIQDMEVRTLLSGEYDSREALVAI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L
Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PV + +  I+I E++ R+D YR+SG GGQ
Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L  LE +++EE A +   
Sbjct: 252 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLNGL 309

Query: 302 SKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                G WG Q+RSYVL PYQMVKDLRT  E  +PS V DG+LD F++A +  +K
Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRK 364


>gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204]
 gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204]
          Length = 350

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 152/343 (44%), Positives = 215/343 (62%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +  LFD +   +RL+  N    +   W +  +A+ ++RE   L   I     + D   + 
Sbjct: 1   MATLFDLEGKEKRLAENNALMAEADFWNDQKKAQKIIRESNQLKVLIETHHSLTDSFAEL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              +       D  + +  S+       + E  + + LLSG  D++++ LE+H GAGGTE
Sbjct: 61  SEGIGELSSSFDEDMNELISEEYTETMKKFEEFEIQVLLSGPYDNHNSILEIHPGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA ML RMY RWAE++ FK E ++  +GEEAG+KS ++LI+GP AYG+LK E GVHR
Sbjct: 121 AMDWAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAENGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DSN+RRHTSF+S+ + P  +D +EIEI + D  I T RASGAGGQH+N TDSA
Sbjct: 181 LVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIDDKDLDIITMRASGAGGQHINKTDSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIP+G+ V CQ +RSQ +N+    NML++KL +L++++ EE A           WG
Sbjct: 241 VRMTHIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKANEWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYV  PY MVKDLRT  E  +   V+DG++D F+ + L 
Sbjct: 301 SQIRSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYLR 343


>gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
 gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
          Length = 372

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 230/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  L    D DN  +++  L    ED   W +   ++  ++E + L +A +   E++
Sbjct: 15  DEPLKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDAFTNYNELE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D    +E+A EE+D SI+ +  + +   K   E  +  +LLS E D+ +A L+++A
Sbjct: 75  KLRDDARTFMEIADEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNCNAILKLNA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA+MLLRMYTRWAE + +  E L+  DG+EAG+KS T+ I G NAYG+LK 
Sbjct: 135 GAGGTESCDWASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQINGENAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++N +R TSF S  V P +++ ++++I+E D RIDTYR+SGAGGQH+
Sbjct: 195 ERGVHRLVRISPFNANGKRQTSFVSCDVMPDIEEDLDVDINEDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITHIPTG+VVQCQ ERSQH+NK +A  ML+AKLY L+ Q+  E         
Sbjct: 255 NKTSSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQENAEKEAGIRGEV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EIGWG QIRSY+LQPY +VKD RTN E  +   VLDG++D F+   L  
Sbjct: 315 KEIGWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYLKW 364


>gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
 gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
          Length = 369

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 206/352 (58%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  + G        Q++S L  ++  P+ W +   A+ +M +   L + ++ I   
Sbjct: 12  LAERLFEIEGYLHLAEKRQQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGIDRA 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++L D     EL  E  D +   E+      ++ ++   +  S  + E D  DA + + 
Sbjct: 72  KEKLGDAEAAFELGTELGDQASFDESRALAVSLEKDLSELELSSWFTDELDHGDAIVTIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG ESQDW  ML  MY ++ ++R +K +  +    E  G+  AT  + G NAYG L+
Sbjct: 132 PGQGGLESQDWCEMLFHMYLKYCDRRGWKVDINDAPAAEVIGLDRATFTVSGKNAYGMLR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP D   RR TSF+ + V PV+ + IE++I  +D RID Y ASG GGQ 
Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPEDIEVDIDPNDLRIDVYHASGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG VV CQ ERSQ +NKA A N+LR++LYE+E +KRE   +     
Sbjct: 252 VNTTDSAVRITHIPTGTVVTCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGP 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
           K EI +G QIRSYVL PYQ++KDLRT  E  +   V  DGDLD F+ A    
Sbjct: 312 KREISFGNQIRSYVLYPYQLIKDLRTGAETGNVESVFSDGDLDQFIIAYHRW 363


>gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 332

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 202/325 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T 
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRLEADADLQKDTE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R 
Sbjct: 61  DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E      G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG LD F+ A L  +
Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325


>gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
 gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
          Length = 373

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 209/354 (59%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   + ++ L  +   P LW +   A+ +      L   +  +  
Sbjct: 12  QLDATLTSIEKVLDLDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  +++EL+ EE+D   L E+   +  +   ++  +  +LLSGE D  +A + +
Sbjct: 72  LRSRIDDLGVMIELSREENDADSLAESEKEIAALAKSIQSLEVRTLLSGEYDEREALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML RMY RWAE+  + TE  +    EEAG+KS T  +K P AYG L
Sbjct: 132 RSGAGGVDAADFAEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EI++ E + RID YR+SG GGQ
Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIDVPEEELRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG VV CQ E+SQ +NKA A  ++         +  E        
Sbjct: 252 SVNTTDSAVRITHLPTGTVVSCQNEKSQLQNKASAM-VILKAKLLALKKAEERAQIDALR 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF++A +  ++
Sbjct: 311 GDVQGSWGDQMRSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGIRWRR 364


>gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
 gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
          Length = 373

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 229/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L+  L  LG   D ++A + L  L  ++     W N+ +A+ + +  + L   +    +
Sbjct: 13  NLAPTLEKLGQALDLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +    D + L E+  E +D S++ E  +    ++ E+E  + ++LL+GE DS++  L +
Sbjct: 73  RKQHWDDLMALCEMGNEFEDESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE+QDWA ML RMYTRW E+  F  + ++  DG+EAGIKSAT++I+G NAYG+L
Sbjct: 133 HPGAGGTEAQDWAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE GVHRLVR+SP+D+N+RR TSF+S+ V P + + +E+EI   D  +  YRASGAGGQ
Sbjct: 193 RGEHGVHRLVRVSPFDANARRQTSFASVEVMPDLPEDVEVEIRPEDIEMQVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVR+ H PTG+VV  QQERSQ +NK     MLRAKL EL++Q++ E  +  + 
Sbjct: 253 HVNKTSSAVRLIHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +I WG QIRSYV  PYQ+VKD RT  E ++   V+DG+LD F+ A L  +
Sbjct: 313 VQLKIEWGSQIRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYLTAE 365


>gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281413|gb|EDT46848.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 336

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+   
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D SI  E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML 
Sbjct: 59  DEDDSIQAELEETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSFSS+ V P +DD++E+EI + D ++DT+R+ GAGGQ+VN   + +R+THIPTG
Sbjct: 179 AKRRHTSFSSVEVMPELDDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334


>gi|118602328|ref|YP_903543.1| peptide chain release factor 2 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567267|gb|ABL02072.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 364

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 167/351 (47%), Positives = 231/351 (65%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   L      +    RL  +  + E+P++W N  +A++L +E+  L +     K++
Sbjct: 13  LKQRTIVLLTHISLEKKQARLEEVLLEMENPNIWTNPDQAQVLGQEKSKLTSICQTFKQV 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL +A  E+D     +  D+L  I+  +E  +FE + SG+ D N AYL++ 
Sbjct: 73  NSVLEDAQELLNMAQTENDEDTANDIIDDLDTIQSSIEKLEFERMFSGDLDVNSAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA M+LRMY RW EK  FK + +E   GE  GIKSAT+   G  A+GWL+
Sbjct: 133 SGSGGTEAQDWAEMVLRMYLRWGEKHNFKVKLMETSAGEVTGIKSATIHFDGKYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+++N +RHTSF S++V P VD+ I+I+I+  D R+DTYRASGAGGQH
Sbjct: 193 TEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEVDNDIDIDINPLDLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT ++VQCQ  RSQ  NK QA   L++KLYELE+QKR       E  
Sbjct: 253 VNKTESAVRITHLPTNIIVQCQDGRSQRANKDQAMKQLKSKLYELEIQKRNAEKQSLEDK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+ IGWG QIRSYVL     +KDLRT +E T+ +DVLDG+LD F++A+L  
Sbjct: 313 KSNIGWGHQIRSYVL-DQSRIKDLRTGVESTNTNDVLDGNLDQFIEASLKA 362


>gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 [Clostridium difficile 630]
 gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile]
          Length = 328

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 160/326 (49%), Positives = 231/326 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ ++  
Sbjct: 1   MNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + 
Sbjct: 61  KSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI
Sbjct: 121 YKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQ
Sbjct: 181 DVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD RTN
Sbjct: 241 HLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V++G++D F+   L + K
Sbjct: 301 AEFGNVDSVMNGNIDLFINEYLKMNK 326


>gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421]
 gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421]
          Length = 354

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 146/342 (42%), Positives = 218/342 (63%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R++ L  +   P  W +   A+  ++   +L   +      ++ L D  
Sbjct: 8   RTIFDVAQRQIRIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAE 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ++LEL  E  D S+L E   N++ +  E++  + E LLSG  D   A L ++AGAGGT++
Sbjct: 68  VVLELVQETGDESLLPEAEGNIEALVGELDRWELEQLLSGPYDERGAILSINAGAGGTDA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE++ ++   LE+ +GEEAG+KSATL I G  AYG+L  E+G HRL
Sbjct: 128 QDWAEMLLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V PV+DDS++++I   D  IDT+R+ G GGQ+VN  ++ V
Sbjct: 188 VRISPFNANDKRQTSFAGVEVMPVLDDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+ V+C QER+Q +N+ +A  ML+A+L  LE +KR++  +       +  WG 
Sbjct: 248 RVTHKPTGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGN 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV  PYQMVKDLRT  E +  + V++G ++ F++  L 
Sbjct: 308 QIRSYVFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYLR 349


>gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 369

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D       ++ L  +   P LW +   A+ +     H +  +  ++++
Sbjct: 12  LAGTLENIEAVVDLPALRVEIADLEEQAGQPDLWNDTETAQKVTSRLAHANGELRRVEDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D S + +   +   ++ E+E  +  +LLSGE D  +A + + 
Sbjct: 72  RRRLDDLPVLYELAEDEGDESAIADADRDRVALRAEIESLEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A ML+RMY RWAE+  +  +  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERHGYGVDVYDTSYAEEAGIKSATFQVHAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESTDHIDIDEKDLRVDVYRSSGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL  LE +++EE A +    
Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQAKL--LERKRQEERALMDSLK 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            T   WG Q+RSYVL PYQMVKDLRT+ E  +P  VLDGD+D F++A +  ++
Sbjct: 310 DTGSSWGNQMRSYVLHPYQMVKDLRTDFEVGNPGAVLDGDIDGFIEAGIRWRR 362


>gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
 gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
          Length = 357

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 151/352 (42%), Positives = 217/352 (61%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  +  + D D    +++ L  +   P+LW +   A+ +  +  H    +  + ++
Sbjct: 4   LTGKLTQIESVMDLDALRAQVADLEQQASSPNLWDDPEAAQKVTSQLSHRQGELRRVSDL 63

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA  E D   + E    L  +   ++  +  +LLSGE D  +A + + 
Sbjct: 64  RQRLDDLGVLYELAEAEGDSGSMAEAEAELTDLGKAIDGLEVRTLLSGEYDDRNAVVTIR 123

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  +I   EEAGIKSAT  +  P  YG L 
Sbjct: 124 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVYDISYAEEAGIKSATFKVSAPYVYGTLS 183

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V P V++   ++++E D R+D YR+SG GGQ 
Sbjct: 184 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDVAEKDIRVDVYRSSGPGGQS 243

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L+A+L   +  K EE A +    
Sbjct: 244 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQARLMLRK--KEEERAEMDALR 301

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRT+ E  +P+ VLDGD+D F+ A +  +
Sbjct: 302 DGGSSWGNQMRSYVLHPYQMVKDLRTDYEVGNPTAVLDGDIDGFLDAGIRWR 353


>gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
 gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
          Length = 371

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 223/351 (63%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +   L    D      RL  +  +   P  WQN  E   ++RE+  L   I   +
Sbjct: 12  LELQEKFESLWRRLDLQGHHDRLKTIEEELAKPEAWQNPEELTPILREKSRLTEEIESWE 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++D   D    LE+A E+    +LQ  S+    +  ++   + E LLS   D  +A LE
Sbjct: 72  ALRDLHEDLQEWLEMADEDQGQEVLQALSETNANLAAQLNKVEMELLLSKPEDKGNAILE 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTE+QDWA MLLRMY RW E+R FK + L+   GEEAGIKS TL I+G  AYG 
Sbjct: 132 IHPGAGGTEAQDWAEMLLRMYLRWCERRGFKVQELDSLPGEEAGIKSVTLQIQGTFAYGL 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E+G+HRL+RISP+D++ RRHTSF+S+ VYP   D IEI++++ D R+D +R+SG GG
Sbjct: 192 LQAEKGIHRLIRISPFDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN T SA+RITH P+G+VVQCQ E+SQ +NK  A  +L+++LY+ E +KRE       
Sbjct: 252 QNVNKTSSAIRITHFPSGIVVQCQNEKSQRRNKETAMKILKSRLYDQERKKREADKQAEY 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +SK  I WG QIR+Y LQPY++VKD RTN E      VLDGD+D F+++ L
Sbjct: 312 ASKEAIAWGSQIRTYTLQPYRLVKDHRTNTEAGDVDKVLDGDIDVFLRSYL 362


>gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 332

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 160/325 (49%), Positives = 218/325 (67%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W N  +A+ ++ +   L + ++   E+  +L D     EL  EE D  I ++ 
Sbjct: 1   MMTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++   + +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++
Sbjct: 61  EQDIVSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQ 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKIETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E      V+DGD+  F++A L 
Sbjct: 301 TNEETAKVDAVMDGDIAPFIEAYLR 325


>gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
 gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
          Length = 338

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 160/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEE+D S+ +
Sbjct: 8   EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 67

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 68  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336


>gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
 gi|226726318|sp|A6WEK6|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
          Length = 367

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 150/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D D   + L+ LN +   P LW +   A+ +      +   +  I+++
Sbjct: 12  LRTTYASIREVSDLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL+ +E D   L E    L  +K ++   +  +LLSGE DS +A + + 
Sbjct: 72  GGRIDDLEVLVELSEDEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A ML+RMY RWAE+R +K+E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV ++  +++ E++ R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL E   + R+   +  +  
Sbjct: 252 VNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLEKARKDRQAELDALKGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  + S + DG++D F++A +  +K
Sbjct: 312 D-SGSWGNQMRSYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWRK 363


>gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63]
          Length = 339

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 160/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEE+D S+ +
Sbjct: 9   EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 68

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 69  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337


>gi|149924687|ref|ZP_01913037.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
 gi|149814444|gb|EDM74035.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
          Length = 354

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 168/346 (48%), Positives = 227/346 (65%), Gaps = 2/346 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    +RL      T DP  W++   A+ ++RE+  L   +  I ++Q  + D  
Sbjct: 4   GGIFDYAGKRERLEEYEIATGDPSFWEDNERAQKILREQSTLKKLVEQIDDVQQTIDDGR 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL  EE D   + E  +NL +    +   +F  +LSG  D + A L ++AGAGG +S
Sbjct: 64  ELYELGREESDTESIVEAWENLGQADALLGKLEFRRMLSGTHDEDSALLSINAGAGGVDS 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RW E++ F  + L+I +G++AGI+ A L I+G  AYGWL+ E GVHRL
Sbjct: 124 QDWAEMLLRMYQRWGERQGFDVKVLDIQEGDQAGIRGADLAIEGDYAYGWLRSEIGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDD--SIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           VRISP+DS +RR TSF+SI V P + D    EIE++ +D R+D YRASGAGGQHVN T+S
Sbjct: 184 VRISPFDSQARRQTSFASIMVLPDLGDGKDFEIEVNPADLRVDKYRASGAGGQHVNKTES 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+VV CQ ERSQHKN A A  ML+AKL++LE Q+R +  +  E  K  I W
Sbjct: 244 AVRLTHEPTGIVVACQMERSQHKNMATAMRMLKAKLWDLEQQRRSDEISALEGDKKAIEW 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV+ PYQ V D RT +++ +   VLDGDL  +M+A L ++
Sbjct: 304 GSQIRSYVIHPYQQVNDHRTELKQGNVDAVLDGDLGSYMEAFLLMQ 349


>gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B]
 gi|166223620|sp|A0LVP4|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus
           cellulolyticus 11B]
          Length = 369

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 151/350 (43%), Positives = 222/350 (63%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  +  + D     +  + L  +  DP LW +   A+ +      L   I  ++ +
Sbjct: 13  LDTRLAGIEQVLDLPAMRREAADLERQAADPGLWNDPENAQRVTSRLSFLQAEIRRVEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D ++L ELA  E+D     E    +  ++  ++  +  +LLSGE D+ +A + ++
Sbjct: 73  RKRLDDVMVLFELAEAENDEPTRTEALAEMAALQKAIDDLEVRTLLSGEYDAREALVTIN 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ DWA MLLRMY RWAE+  + TE L+    EEAGIKSAT ++  P  YG L 
Sbjct: 133 SQAGGVDAADWAQMLLRMYLRWAERHGYPTEILDTSYAEEAGIKSATFIVHAPFTYGLLA 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I E + R+D +R+SG GGQ 
Sbjct: 193 AEHGTHRLVRISPFDNQARRQTSFAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A  +L+A+L  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHLPTGIVVTCQNERSQLQNRATAMMVLQARL--LERRRQEEAAKLAALR 310

Query: 303 -KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +T   WG QIR+YVL PYQ+VKDLRT +E ++ + VLDG++D+F+ A +
Sbjct: 311 GETTTSWGTQIRNYVLHPYQLVKDLRTEVETSNTAGVLDGEIDEFIDAGV 360


>gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 323

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 193/310 (62%), Positives = 242/310 (78%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRER  L N I  ++ ++  + D   L+ELA  E D  ++ E    L+ +  E + ++ 
Sbjct: 1   MMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDLAEEAKRRET 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ESLLSGEADSND YLEV+AGAGGTE+QDW  MLLRMYTRWAE   +K   +E  +GE+AG
Sbjct: 61  ESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSEGEQAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+L+ GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEIEI+
Sbjct: 121 LKSATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A A  MLRA+L
Sbjct: 181 DADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE ELQKRE  A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E  +P  VLDGDLD
Sbjct: 241 YEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGDLD 300

Query: 345 DFMKATLAIK 354
            FM A LA++
Sbjct: 301 AFMAAALAMR 310


>gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
 gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
          Length = 372

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 225/343 (65%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           + +N  GG+FD   + +RL  +      P  W        ++RE+  L+  ++    +  
Sbjct: 16  QNMNPSGGVFDHAQSKERLEEIEHDLSKPGAWDKPDALTPVLREKSMLEEKVTSYDNLTS 75

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              D    L +A E+ D  IL+  S+N++++   VE  +  +LLSG  D + A LE+H G
Sbjct: 76  SKDDVEEWLMMASEDQDQEILEALSENVEKLAKLVEQTELAALLSGPEDKSTAILEIHPG 135

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG ESQDWA MLLRMY RWA+KR +KT  L+    +EAGIKS TL I+G  AYG+LKGE
Sbjct: 136 AGGIESQDWAEMLLRMYLRWADKRNWKTSYLDYQPDDEAGIKSVTLRIEGLYAYGFLKGE 195

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRL+RISP+D++ RRHTSF+S+ VYP +   IEIE+ + D R+D +RASG GGQHVN
Sbjct: 196 AGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIRLDVFRASGPGGQHVN 255

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITH+PT +VVQCQ E+SQ KNK  A  +L+++LYE EL+++EE      ++K 
Sbjct: 256 KTNSAVRITHLPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQELKRQEESKRADYATKD 315

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            IG+G QIR+Y LQPY++VKD R   E  +   VLDG+LD  +
Sbjct: 316 SIGFGSQIRTYTLQPYRLVKDHRCGAEDGNVEAVLDGELDGLI 358


>gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681]
 gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681]
          Length = 331

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 225/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   + +++   ++++    D  ++ ELA EE D ++  E  
Sbjct: 1   MAAPDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELADEEGDETLAGEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++++ +  +++  + + LL+   D  +A LE+H GAGGTESQDW  MLLRMYTRWAEKR 
Sbjct: 61  NSIRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D +++EI   D +IDTYRASGAGGQH+NTTDSAVRITH+P+G+VV CQ ERSQ
Sbjct: 181 DVVPEIADDVDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  MLR+KLYE +++++ +  +     +++I WG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNREQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F+   L  +
Sbjct: 301 VETGNVGAVMDGDLDPFIDGYLRSQ 325


>gi|326692249|ref|ZP_08229254.1| peptide chain release factor 2 [Leuconostoc argentinum KCTC 3773]
          Length = 333

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 149/326 (45%), Positives = 211/326 (64%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQET 88
             +   W + ++A+ ++ E   L N       + ++  +  +L+E+  E+ +D     E 
Sbjct: 1   MTESGFWDDNVKAQKVIEENNILKNRRDSFLNLTNQAEEIAVLIEMLSEDPEDEDTAAEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + ++++++ +VE    E LL+   D+N+A LEVH G+GGTES DW   L RMYTRWA++ 
Sbjct: 61  AASVEKVQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTRWAQQH 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F+ E L+ H G+EAGI SAT+ I G NAYG+L+ E+GVHR VRISP+DS  RRHTSF S
Sbjct: 121 GFQVEVLDYHAGDEAGIDSATIKISGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN   + VR+TH PTG+VV    ER+
Sbjct: 181 VDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSSTVERT 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q+ N+  A  +L+ KLY+LEL+K+          K E GWG QIRSYVL PYQMVKD RT
Sbjct: 241 QYGNRDYAMRLLKGKLYQLELEKQAAERAALTGEKMENGWGSQIRSYVLHPYQMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E   P  VLDGDLD F+ A L  +
Sbjct: 301 NYETNQPQQVLDGDLDPFINAYLQWQ 326


>gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
 gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
          Length = 340

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 154/329 (46%), Positives = 218/329 (66%), Gaps = 1/329 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L  K  +   W +   A+ ++++ +   + I    ++     D  +++    E+ D S
Sbjct: 6   EELEYKMSEEDFWNDPENAQSVLKKAKGYRDTIEEYNQLHVDHEDLEMMISFI-EDGDES 64

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
             ++    L+ ++  V   +  +LL GE D N+A + +HAG GG ++QDWA MLLRMYTR
Sbjct: 65  FQKDLLKGLEALENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQDWAKMLLRMYTR 124

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + +  + L+I    EAGIKS TLLI+G NAYG+LK E+GVHRLVRISP+DS+ +RH
Sbjct: 125 WAEDKGYGVKTLDILTDTEAGIKSVTLLIEGMNAYGYLKAEKGVHRLVRISPFDSSGKRH 184

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S+ V P +DDS++I+I+ +D RIDTYRASG+GGQHVN TDSAVRITHIPTG+VVQC
Sbjct: 185 TSFASVDVMPEIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGIVVQC 244

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQH N+  A  ML +KL E++  +++E     +    +I WG QIRSYV  PY +V
Sbjct: 245 QNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDLQGEYNQIAWGSQIRSYVFNPYNLV 304

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KD RTN+E  +   V+DG++D+F+   L 
Sbjct: 305 KDHRTNVEMGNIQAVMDGEIDEFINGYLK 333


>gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37]
 gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37]
          Length = 374

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 186/353 (52%), Positives = 239/353 (67%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L     W+ A  RL   N + EDP+LW N   A+ LMR+RQ L +A+     
Sbjct: 11  KIEKSLDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDALESYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D + L+EL   E+D  ++ +    L+ +      K+ E+LL GE D NDA+LE+
Sbjct: 71  LKQELEDQVELIELGEMEEDAEVVADAEAALKALVETSAKKELEALLDGETDGNDAFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWANML RMY RWAEKR F+ +  E   G EAGIKSAT  IKG NAYGWL
Sbjct: 131 KAGAGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G HRLVRISP+     R TSF+++  YPV+DD+IE+ ++ +D RIDT+R+SGAGGQ
Sbjct: 191 KSESGTHRLVRISPFG-KGTRETSFAAVGAYPVIDDNIEVTVNPADIRIDTFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 250 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHE 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT  E      VLDGDLD FM+ATLA++
Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLALQ 361


>gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
 gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
          Length = 369

 Score =  355 bits (910), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 243/350 (69%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  ++   +  +F  +N  + L  L  +  D   W +  +A+ + ++ Q +   I  +K+
Sbjct: 12  EAKKKFEDIIKVFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ +  D    +EL+  ++D S ++   + ++ I+ +V+  + E +L+G+ D+++AYL +
Sbjct: 72  IEAKFEDLDAAIELS--DEDQSFVETIKEMVEEIEKKVKTFELELILNGKFDASNAYLTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE++ F  + ++   GEEAGIKSA + IKG  AYG+L
Sbjct: 130 HPGAGGTESQDWASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N RRHTSF+S+ V P +DD I+IEI+  D RIDTYRASGAGGQ
Sbjct: 190 KYERGVHRLVRISPFDANKRRHTSFASVNVIPEIDDDIDIEINPEDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITHIPTG+VV CQ ERSQ +NK  A  +L+A+LY+LEL+KR++     + 
Sbjct: 250 YVNKTESAVRITHIPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV QPY MVKD RTN+E  +   V+DG++D F+++ L
Sbjct: 310 ELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESEL 359


>gi|304407676|ref|ZP_07389327.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
 gi|304343159|gb|EFM09002.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
          Length = 329

 Score =  355 bits (910), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   + + +   +++     D   +LE+  EE D S   E +
Sbjct: 1   MTAPDFWDDNDKAQAVISEMNAVKSTVEKYEKLAGDHDDLSTMLEMVEEEGDDSFESELT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +   +   +   LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEK  
Sbjct: 61  EGVESLVKRISDFELTLLLNQPYDKLNAILELHPGAGGTESQDWGQMLYRMYTRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS T+ IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVELLDYLPGDEAGIKSVTISIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D IEIEI   D ++DTYRASGAGGQHVN T+SA+RITHIP+G++V CQ +RSQ
Sbjct: 181 DVMPEIEDDIEIEIRTEDLKVDTYRASGAGGQHVNKTESAIRITHIPSGIIVACQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  MLR+KLYE +++++++        +++I WG QIRSYV  PY MVKD RT+
Sbjct: 241 IQNREQAMKMLRSKLYERKIEEQQKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F+   L  +
Sbjct: 301 VETGNVGAVMDGDLDAFIDGYLRSQ 325


>gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 332

 Score =  355 bits (910), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 202/325 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T 
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R 
Sbjct: 61  DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E      G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG LD F+ A L  +
Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325


>gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
           33331]
          Length = 368

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D   L E    L+ ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAEDEGDADALAEAESELESVRKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAVEVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  +EI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
 gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
          Length = 370

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D     +++  L  +  DP LW +   A+ +          I  ++ 
Sbjct: 11  ELDSTLATIEKVMDPAALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D ++     D L+ +   +E  +  ++LSGE D  +A + +
Sbjct: 71  LRSRVDDMPVMFELAEEEGDTAL---ADDELEDLGAAIEALEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I++ + D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +  +
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGIRWR 359


>gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
 gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
          Length = 329

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 161/325 (49%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++              ++ + L +  ++LE+  EE D  +  E  
Sbjct: 1   MAHPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099]
 gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099]
          Length = 340

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 224/326 (68%), Positives = 273/326 (83%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  LW   +EA+ LMRERQ L+  I+ +K +   L DN+ L+EL  EE D  ++ E 
Sbjct: 2   RAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEA 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              ++ ++ E + +Q E+LLSGEAD+ND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+R
Sbjct: 62  EAAIRSMQGEAKARQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERR 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           +FK E LE+HDGEEAGIKSATL+IKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S
Sbjct: 122 RFKVEVLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERS
Sbjct: 182 VWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+A+AW MLR++LYE EL+KRE IAN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT
Sbjct: 242 QHKNRAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWGHQIRSYVLQPYQLVKDLRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
            +E TSPS VLDGDLDDFM+A+L+ +
Sbjct: 302 GVESTSPSSVLDGDLDDFMEASLSQR 327


>gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Mesorhizobium sp. BNC1]
 gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp.
           BNC1]
          Length = 322

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 220/309 (71%), Positives = 260/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+  I+ I  +   L DN+ L++L  EE D  I++E    ++ ++ E+  +Q E
Sbjct: 1   MRERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISARQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+ND YLEVHAGAGGTESQDWA MLLRMYTRWAE+R  K E LE+HDGEEAGI
Sbjct: 61  TLLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+ G NAYGWLK E GVHRLVRISP+DSN+RRHTSF+SIWVYPV+DDSIEIEI E
Sbjct: 121 KSATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVIDDSIEIEIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+ RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQERSQHKN+A+AW MLRA+LY
Sbjct: 181 SEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E  SP DVLDGDLD+
Sbjct: 241 ELELKKREEAANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESPSPQDVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FMKA+L+ +
Sbjct: 301 FMKASLSQR 309


>gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707]
 gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
 gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
          Length = 331

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 173/328 (52%), Positives = 228/328 (69%), Gaps = 1/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            ++ +   P +W     A+ L +ER  L + ++ + E+   +     L ELA+EE D   
Sbjct: 2   EVDRELAVPSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDT 61

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            QE    L  ++  +   +F+ + +GE D N+AYL++ AG+GGTE+QDWANMLLRMY RW
Sbjct: 62  AQEIIAELDVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 121

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            EK  FKTE  E+ +GE AGIKSA +  +G  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 122 GEKHSFKTELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+P+ +VVQCQ
Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSLVVQCQ 241

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH+NKA A   LRAKLYELE++ R+      E +K +IGWG QIR+YVL     +K
Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRNRQAEKQAAEEAKADIGWGSQIRNYVL-DQSRIK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           DLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 DLRTGIEVGNTQGVLDGDLDSFIEASLK 328


>gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
 gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
          Length = 365

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 159/349 (45%), Positives = 223/349 (63%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS ++  + G+   +N   RL  +     D +LWQ++ +A  + +E+  + N ++     
Sbjct: 13  LSIKVENIAGVVKPENIKARLKEIEELENDQNLWQDIAKAGAIGKEKTKISNILNKFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D   L ELA  E+D   +         ++ ++   +   +LSGE D  +A + +H
Sbjct: 73  KNAVDDAKALYELANSENDEETINSLFAEADELEDKIINLEISMMLSGENDDKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + +++G NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSFIVRGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR+SP+DS  RRHTSFSS+ V P ++D IEI I E D R+D +RASGAGGQH
Sbjct: 193 AENGIHRLVRVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRVDVFRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SAVRITHIPTG+VV CQ +RSQHKNK  A  +L+++LYELEL K+ E       S
Sbjct: 253 INKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELMKQREKDENAPKS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L
Sbjct: 313 --EIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVL 359


>gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
 gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
          Length = 373

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 147/347 (42%), Positives = 214/347 (61%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L      D + +R+  L      P  + +   +K +  E   L   ++  +++Q   
Sbjct: 18  VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   +L +  EE D  ++ E  + +  +   V+  Q  ++L+GE D ++A L  HAG G
Sbjct: 78  DDAETMLVMLDEEYDPDMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG LK E G
Sbjct: 138 GTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I   D  +  +R+SGAGGQH+N T
Sbjct: 198 VHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVFRSSGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+ H PTGVVV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + EI
Sbjct: 258 SSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 318 AWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 370

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 219/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H    +  + E+
Sbjct: 12  LDATLTTVEKVMDLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQAELRRVTEL 71

Query: 63  QDRLCDNLILLELAL-EEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  EE D   S  ++       ++ ++E  + +++L+GE D  +A +
Sbjct: 72  RSRLDDLPVLYELAEAEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAGEYDPREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+     E  +    EEAG+KSAT  +K P  YG
Sbjct: 132 NIRSGAGGVDAADWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATFAVKAPYMYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E +  + E      
Sbjct: 252 GQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKR-QEERAQMDA 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             S T   WG Q+RSYVL PYQMVKDLRTN+E  +PS VLDG+LD F++A +  +
Sbjct: 311 LKSDTGASWGNQMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQFIEAGIRWR 365


>gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 367

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 157/352 (44%), Positives = 218/352 (61%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D     +R+  L  +  DP LW +   A+ +  E       +  +  +
Sbjct: 12  LSATLTTIEKVMDPRAMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  ++ ELA EE D S+     D L  ++  VE  +  ++LSG+ D  +A + + 
Sbjct: 72  RGRLEDLPVMYELAEEEGDASL---ADDELDAVRDAVETLEVTTMLSGDYDQREAVINIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVR+SP+D+ +RR TSF+ + V PVV+ +  IEI +S+ R+D YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVVEQTDSIEIPDSEVRVDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG++V CQ E+SQ +NKA A  +L+AKL E +  + E        +
Sbjct: 249 VNTTDSAVRLTHVPTGIMVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAEMDALGA 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRTN E   PS VL GD+DDF++A +  +
Sbjct: 308 GGNASWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFLEAGIRWR 359


>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
 gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
          Length = 368

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELASVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE++ +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL +   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQARMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G+++ F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364


>gi|323697942|ref|ZP_08109854.1| peptide chain release factor 2 [Desulfovibrio sp. ND132]
 gi|323457874|gb|EGB13739.1| peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
          Length = 372

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 165/349 (47%), Positives = 220/349 (63%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q   L G  D+     RL  +  +   P  W N      L++E+  L   +     +
Sbjct: 14  LIDQYESLWGRLDYAETKTRLDAIEKEISKPGAWDNPEALTPLLKEKSQLSTKLEMYDGL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   D    LELA E+ D   L   +  +  ++  +   +  ++ + E D  DA LE+H
Sbjct: 74  SEAKDDLDAWLELAQEDPDEESLSALNAQVALLRERLAGTELATMFAFEHDKGDAILEIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGG ESQDWA MLLRMY R+AE++ FK   L+   GEEAG+KS TL I+G  AYG LK
Sbjct: 134 PGAGGVESQDWAEMLLRMYYRYAERKGFKVTQLDYQAGEEAGLKSVTLQIEGLFAYGLLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRL+RISP+DS+ RRHTSF+S+ VYP +D++IEIE+ + D RIDT+R+SG GGQ 
Sbjct: 194 GETGVHRLIRISPFDSSGRRHTSFASVDVYPDMDENIEIEVKDEDLRIDTFRSSGPGGQS 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVRITHIPTG+V QCQ E+SQH+NKA A  +++A+LYE EL+K EE       +
Sbjct: 254 VNKTSSAVRITHIPTGIVAQCQNEKSQHRNKATALRLVKARLYERELKKIEESRRQDYQA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  I WG QIR+Y LQPY++VKD R+N E  +    LDGDLD+ ++  L
Sbjct: 314 KDAIAWGSQIRTYTLQPYRLVKDHRSNCESGNVDAFLDGDLDEMIRNYL 362


>gi|239930935|ref|ZP_04687888.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 352

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + ++ R+
Sbjct: 1   MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E   Q+ +   +  +      
Sbjct: 241 DSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 348


>gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
 gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
          Length = 369

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 220/353 (62%), Gaps = 4/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   + +  L+     P LW +   A+ +     H    +  IK++
Sbjct: 12  LDTTLTSIEKVMDVDRLARSIDELSEAASAPDLWNDQENAQKVTSRLSHAQAELKRIKDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L EL   ++D     E    L  ++ E++ ++  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLEVLFELG--DEDPDTYLEAQQELLGLQKEIDAQEVRTLLSGEYDEREALVTIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A ML+RMY RW+E+  + TE  +    EEAGIKS T  +K P AYG L 
Sbjct: 130 SEAGGVDAADFAEMLMRMYLRWSERHGYNTEVYDTSYAEEAGIKSTTFQVKAPYAYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +++ E D R+D YR+SG GGQ 
Sbjct: 190 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVETSDHVDVDEKDLRVDVYRSSGPGGQG 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L++KL  LE +++EE A +    
Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVLQSKL--LERRRQEERAVMDALK 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            T   WG Q+RSYVL PYQMVKDLRTN E  +PS V DG++DDF++A +  ++
Sbjct: 308 DTGNSWGNQMRSYVLHPYQMVKDLRTNFEVGNPSAVFDGEIDDFIEAGIRWRR 360


>gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift [Anaplasma
           phagocytophilum HZ]
 gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ]
          Length = 376

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 168/352 (47%), Positives = 232/352 (65%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    D       L  L+ +   P LW +  +AK L+ ER  +   ++  + 
Sbjct: 13  EIGEDLASIARCLDIVGLESTLESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   L E+  + DD   L   +  LQ +KL +  K+ E + S EAD+N  +L +
Sbjct: 73  LEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
            +GAGGTES DW  MLLRMYT+WAE   +F  E ++  DGEE G+K+ T+ I G  AYGW
Sbjct: 133 RSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGW 192

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
            + E G+HRLVRISP+D  ++RHTSF+S+ V PVVD  I+I+I E D RIDTYRASGAGG
Sbjct: 193 ARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGG 252

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITHIP+G+VVQCQ  RSQH+N+A+A+++L+++LYE+ELQ++E+      
Sbjct: 253 QHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDH 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +K EIGWG QIRSYV+ PY+MVKDLRT  E  +   V++GDLD F+ A L 
Sbjct: 313 QNKCEIGWGHQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 364


>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 376

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 215/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +  + +  + D +     ++ L      P LW +   A+ +  +  H    +  +++ 
Sbjct: 12  LQQTFSSIREVSDVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSHKQGTLEKLQKF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+ +  +E D   L E +  ++++K E+   +  +LLSGE D   A + V 
Sbjct: 72  DQRIEDVELLVSMGEDEGDEDALNEAAAEVEKLKSELAALEISTLLSGEFDERSAVITVR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DWA ML RMY RWAE R +K E L+    E AG+KSAT+ +  P AYG L 
Sbjct: 132 AGAGGDDATDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQVNAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHIDIDENDLRIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTGVVV  Q E+SQ +N+A A  +L+++L +L+  + EE      + 
Sbjct: 252 VNTTDSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQLKR-EEEEAQKKDLAG 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYV  PYQMVKDLRT  E  +P  V DGD+DDF++A +  +
Sbjct: 311 DIKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFLEAGIRWR 362


>gi|299137096|ref|ZP_07030279.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
 gi|298601611|gb|EFI57766.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
          Length = 375

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R+    G +FD     + L+ +  K  DP +W +  +++ LMRER+ L++ ++   E+  
Sbjct: 12  RKYATCGSIFDSPRLKKELAVIEEKIADPAVWADAAKSQPLMRERKRLESQLADDAELAR 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           R  D     +L  E  + S+  +    +  +    E  +  ++LS E D+ +A + VH G
Sbjct: 72  RGEDIDAYFDLMRE-GEASVEPDLKREIDSLVAFSEALESRTMLSEENDTLNAIVTVHPG 130

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTESQDWA ML+RMY RWAE++ FKTE  E+ DG+EAGIKSAT  I G  A+G + GE
Sbjct: 131 AGGTESQDWAEMLMRMYLRWAERQGFKTEINELQDGDEAGIKSATFTITGDFAFGLIAGE 190

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVRISP+D   RRHTSF+S++V P +DDSI I+I   D RIDTYR+ G GGQHVN
Sbjct: 191 TGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVN 250

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+V  CQ ERSQHKNK +A  MLR++LYE EL K++ ++   E SK 
Sbjct: 251 TTDSAVRITHLPTGIVAGCQNERSQHKNKEKAMKMLRSRLYEYELDKKKAVSRKLEDSKL 310

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           EI +G QIRSYVLQPY++ KDLRT +E      VLDG+L+ F++  L +++
Sbjct: 311 EINFGSQIRSYVLQPYRIAKDLRTRVEVGDVDRVLDGELEPFIRGYLKMRR 361


>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
          Length = 368

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 215/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     HL   +   + +
Sbjct: 13  LSSTMGSIESVLDLDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  EDD   L E    L  ++  ++  +  +LLSGE D  +A + + 
Sbjct: 73  RARIDDLGVLFELAEAEDDADTLAEAETELAAVRKALDEMEVRTLLSGEYDEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E++ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVEIDETELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQARMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  ++
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAIRWRR 364


>gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis C231]
 gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis I19]
          Length = 366

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW N   A+ +  E   +   +  +  
Sbjct: 11  ELDATLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D +  +   + L  +  E+E  + +++LSGE D+ +A + +
Sbjct: 71  LRQRIDDMPVMYELAEEEGDDT--ELADEELAELTSEIESLEVKTMLSGEYDAREAVINI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 129 RSGAGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ I V PVV+ +  I+I +S+ R+D YR+SG GGQ
Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKR-QEERAELDALG 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   P  VLDGDLD F++A +  +
Sbjct: 308 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWR 360


>gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
 gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
          Length = 364

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 166/350 (47%), Positives = 242/350 (69%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++ + +  +F  ++  ++L  L ++T  P  W +  +A+ + RE Q +   +  +++
Sbjct: 7   ELKKKYDDIIEVFHPEDKKEKLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEK 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D  + +ELA  E+D S+ +     +  +  ++   +   +L+G+ D ++AYL +
Sbjct: 67  IKVLFEDIEVGIELA--EEDPSMQEHLEQIVDEVGEKIREFELALILNGKFDGSNAYLSI 124

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE++ F  E ++  +GEEAGIKSATL IKG  AYG+L
Sbjct: 125 HPGAGGTESQDWASMLLRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFAYGYL 184

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I+IEI   D R+DTYRASGAGGQ
Sbjct: 185 KYERGVHRLVRISPFDANKRRHTSFASVNVLPEIEDDIDIEIRPEDLRVDTYRASGAGGQ 244

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SA+RITH+PTG+VV CQ ERSQ +N+  A  ML+A+LY+LEL+KR +     + 
Sbjct: 245 YVNKTESAIRITHLPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIEQIQG 304

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV QPY MVKD RT++E  +   V+DG++D F++A L
Sbjct: 305 ELRDISWGNQIRSYVFQPYTMVKDHRTDVETGNIEAVMDGEIDMFIEAEL 354


>gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 329

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 167/326 (51%), Positives = 225/326 (69%), Gaps = 2/326 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL--EEDDCSILQETS 89
            P+ W N  +A+ +M +       +    +I+D + DN  L++L    +ED+   L+E  
Sbjct: 2   SPNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEVD 61

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            NL++IK  +   + ++ L+GE D N+AYL ++AGAGG E+ DWA+ML RMYTR+ EKR 
Sbjct: 62  SNLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKRG 121

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  ++++ E  GIKS TL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHTSFSS+
Sbjct: 122 FKVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSSV 181

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V+P +D+   IEI  SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV   Q ERSQ
Sbjct: 182 DVFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQ 241

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N+L +KL +++ ++++E     + S ++I WG QIRSYV QPY MVKD RTN
Sbjct: 242 MQNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWGSQIRSYVFQPYTMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V+DGD+  F+ A LA  +
Sbjct: 302 YEMGNVEAVMDGDIQGFIDAYLAQNQ 327


>gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
 gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
          Length = 373

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 221/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D      + L  +   P LW +   A+ +  +  +++  I  +  +
Sbjct: 13  LDATLRNIEAVLDLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSYVNGEIEKLGSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLELA  E D  +L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRIDDANVLLELAEAEADSGVLSEVESEITGLAKAIQEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E++ RID YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L+A+L  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKMAGLK 310

Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               G WG Q+RSYVL PYQMVKDLRT  E  +PS V DGDLD F++A +  +K
Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIEAGIRWRK 364


>gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
 gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
          Length = 373

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 141/351 (40%), Positives = 209/351 (59%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   +    D D    +++ L  +  +P LW +   A+ +        + +  +    
Sbjct: 14  RAKYGSIAEALDMDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSAS 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R+ D   L+EL  EE+D   L E  + +++I+ +++  + ++LL GE D   A + + +
Sbjct: 74  QRIDDVETLVELGQEEEDADTLAEAQEEVKKIQSDLDDMEIQTLLDGEYDERSAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I +SD R+DTY +SG GGQ V
Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDSDIRVDTYCSSGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +  
Sbjct: 254 NTTYSAVRITHLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELAGD 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGDLD F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGIRWR 363


>gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
 gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
          Length = 329

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 155/329 (47%), Positives = 211/329 (64%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  EELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RTN E      V+DGDLD F+ A L  +
Sbjct: 299 HRTNFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
 gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
          Length = 348

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 167/349 (47%), Positives = 231/349 (66%), Gaps = 2/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD D+   ++  +  KT +P  W     ++  ++E   L   I   ++I    
Sbjct: 1   MRKSGGIFDLDSLNLKIERIEKKTAEPDFWN-RENSQETLKELNILKKLIEEYEKISGMN 59

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +++E   E  D S  +E  D +  +  E++  + + LL  + DSN+A L ++AGAG
Sbjct: 60  EDVSVMIEFI-EAGDDSFEKELDDKIDTVTEEIQNFKTKLLLDEKYDSNNAILTINAGAG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW  ML RMY RW+ ++ FK E L+   GEEAGIKS TL IKG  AYG+LKGE+G
Sbjct: 119 GTEACDWTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLKGEKG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN +RHTSF+++ V P +DD +E+ I   D ++DTYRASGAGGQHVNTT
Sbjct: 179 VHRLVRISPFDSNGKRHTSFTAVNVVPEIDDDVEVNIRPEDLKVDTYRASGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT  VV CQ+ERSQ KNK  A  +L+++L+E+EL+KRE+     + ++++I
Sbjct: 239 DSAVRITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENIKGTESKI 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 299 EWGSQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKFYK 347


>gi|134097701|ref|YP_001103362.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|166225115|sp|A4F8R2|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 367

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 224/354 (63%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS  L  +  + D D    +++ L  +   P LW +V  A+ +  +  H  + +  IK+
Sbjct: 11  ELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRKIKD 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  +L EL+ +E D S L E      ++K ++E  +  +LLSG+ D  +A + +
Sbjct: 71  LRQRVEDLEVLYELSEDEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQREAVVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            A AGG ++ D+A ML+RMY RWAE+ ++  E  +    EEAG+KSAT  +  P AYG L
Sbjct: 131 RAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  +EI E D R+D +R+SG GGQ
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L++KL  L  +K +E A +   
Sbjct: 251 SVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKL--LAKKKEQERAELDAL 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG +D F++A +  ++
Sbjct: 309 KDSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGIRWRR 362


>gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
 gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
          Length = 370

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 217/353 (61%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 14  QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE   S+  E   +L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 74  LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWA K   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVR+SP+D+  RR TSF+ + V PVV+ +  I++ +++ R+D YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +  +
Sbjct: 310 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 362


>gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826]
 gi|166223623|sp|A7ZE19|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826]
          Length = 366

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 231/354 (65%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  ++  +G +   D+   RL  +    +DP  WQ++  A  L +E+  + N ++   +
Sbjct: 12  KLQTKVENIGSIVKPDDIKARLKEIEAIEQDPDFWQDIARAGALNKEKTKISNMLAKFSD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               + D   L ELA  E+D   +    ++ + +  ++   +   LLSGE D  +A + +
Sbjct: 72  ANQAVSDAKELFELANSENDEETINSLFEDAKNLDEKIVNLEISMLLSGEDDGKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAYG+ 
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGENAYGYF 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P VDD IEIEI E D +IDTYRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VVQCQ +RSQHKN+A A  ML+++LYELEL K++E +N    
Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASN--SV 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKMIEGVLIAQK 363


>gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
 gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
          Length = 356

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 150/343 (43%), Positives = 206/343 (60%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      R   L      P  W +   A+  MR    +   +S +   +  + D 
Sbjct: 2   LRTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   + D  +LQE  + L +++  ++  + E LLSGE D   A L ++AGAGGT+
Sbjct: 62  QATLELYELDPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HR
Sbjct: 122 AQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANDKRQTSFAGVEVMPKIEEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG
Sbjct: 242 VRILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIR+YV QPYQMVKDLRTN E      V+DG LD F+ A L 
Sbjct: 302 NQIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDACLR 344


>gi|315445399|ref|YP_004078278.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
 gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
          Length = 372

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 216/355 (60%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L +   DP LW +   A+ +  +  H  N +  ++E+
Sbjct: 12  LDTTLTTVERVVDVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+         E    L +++ ++   +  +LLSGE D  +A +
Sbjct: 72  RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +       WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365


>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 372

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 223/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D +    +++ L  ++ DP LW +   A+ + R+   L++ ++ I  I
Sbjct: 13  LAATLASVSAVLDLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             RL D  +L ELA  EDD     E    L +++ E+   +  +LL+G  D  +A + ++
Sbjct: 73  GQRLDDLGVLYELAEAEDDADTRVEADRELDQLRKEIGELEVRTLLNGPHDEREAIVTIN 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ DWA ML RMY RWAE+  + T+  E    EEAGIKS +  +K P AYG L+
Sbjct: 133 SQAGGVDAADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE G HRLVRISP+D+ +RR TSF+ + V PVV+ S  IEI + D R+D YR+SG GGQ 
Sbjct: 193 GEHGTHRLVRISPFDNQNRRQTSFAGVDVVPVVEQSDHIEIDDGDLRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +ML+AKL  L  ++ EE A + E  
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKL--LARKREEEQAALDEIR 310

Query: 303 KTEI-GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+R+YVL PYQ VKD+RT  E  + S VLDGD+D+F+ A +   +
Sbjct: 311 GDSVSSWGTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEIRWMR 364


>gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
 gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
          Length = 329

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 160/325 (49%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++              ++ + L +  ++LE+  EE D  +  E  
Sbjct: 1   MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHR VRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRFVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIP G VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPKGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 366

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 172/355 (48%), Positives = 239/355 (67%), Gaps = 2/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L + L  + G  D DN    L+ L+ +     LW +   A+ ++ ER  +   ++   
Sbjct: 12  VSLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFT 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++       LL +   + D  +L E    L ++K +V+ K+ E L S EAD ND ++E
Sbjct: 72  ELEEEYNYYTELLSVINNDTD-ELLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIE 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           + +GAGGTES DW++ML RMY RWAE    FKTE +   DGEE G+KSAT+ + G NAYG
Sbjct: 131 IQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K E G+HRLVRISP++SN++RHT+FSSI V PV+++   IEI + D RIDTYRASGAG
Sbjct: 191 WAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAG 250

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N A+A N+L+++LY+L+LQ++E+     
Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEE 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +  IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 311 HNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISALTTK 365


>gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
 gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
          Length = 371

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 222/354 (62%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D      +++ L+ +   P+LW +   A+ +        + +  + +
Sbjct: 12  QLRTTLESIETVSDPTALRAKIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D   L+E+A EEDD   L E    L  I+ ++   +  +LL+GE D  DA + +
Sbjct: 72  LRGRIDDLETLVEMAAEEDDADTLAEAEAELVGIRKDLGELEIRTLLAGEYDVRDAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ
Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSVEIPESEIKVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  Q+ E  A    +
Sbjct: 252 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LVRQEEERAAKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVLQPYQMVKDLRT  E  +P+ V DGD+DDF++A +  ++
Sbjct: 311 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPASVFDGDIDDFIEAGVRWRR 364


>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
 gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
          Length = 373

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D   + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 15  LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 75  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 135 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N  +  
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 315 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 366


>gi|260771153|ref|ZP_05880080.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|260613750|gb|EEX38942.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|315179241|gb|ADT86155.1| peptide chain release factor 2 [Vibrio furnissii NCTC 11218]
          Length = 320

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 169/317 (53%), Positives = 224/317 (70%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I ++   + D   LLELA+E +D     E    L+ +
Sbjct: 2   WNEPERAQALGKERSSLEAVVETIDQLDQGVDDVEGLLELAVEAEDQETFDEIGPELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SG+ DS+D YL++ AG+GGTE+QDW +M+LRMY RWA+ + FKTE +
Sbjct: 62  ESKLAKLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP +
Sbjct: 122 EVSEGDVAGLKSATVRIVGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DDNIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
 gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
 gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
 gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
          Length = 371

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D   + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
 gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
          Length = 342

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 235/329 (71%), Positives = 281/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N K EDP+LW +  EA+ LMRERQ LD+ I+ +++++ +L DN+ L+EL  EE D  ++
Sbjct: 1   MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKDNVELIELGEEEGDGGVV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 61  KEAEDALKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQ
Sbjct: 181 FSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQ 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW MLRA++YE EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 241 ERSQHKNRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +  T+P DVLDGDL++FM+A LA +
Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 329

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 154/329 (46%), Positives = 212/329 (64%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E +    V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVSQVDKVMDGDLDGFIDAYLKWR 327


>gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5]
 gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5]
          Length = 337

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 182/328 (55%), Positives = 238/328 (72%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L   T +P LW +   A+ L+RE+ +L+  ++   +++  L D L L E+A  E+D   L
Sbjct: 4   LEELTANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDLETL 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+A
Sbjct: 64  SQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRISP+++  +R TS
Sbjct: 124 ERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ 
Sbjct: 184 FASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQS 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRSYVLQPYQMVKD
Sbjct: 244 DRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRSYVLQPYQMVKD 303

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           LRT+ E +    VLDGDL++F+ A LA+
Sbjct: 304 LRTDYETSDTKGVLDGDLEEFVSANLAM 331


>gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
 gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
          Length = 346

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 221/343 (64%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
             FD  +  +++   + +T +P  WQ+  +A+ ++R +  L + +   +E+  +L     
Sbjct: 2   SHFDLSSKNKQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLND 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +    E D  ++    +    +  + E  + + LLS E D N+A LE+H GAGGTES 
Sbjct: 62  TADELKSEFDEELMMIAEEEYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMYTR+AEK  FK   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWASMLYRMYTRYAEKHGFKVTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS +RRHTSF+S+ V P  +D IEI+I   D  ++T RASGAGGQH+N TDSAVR
Sbjct: 182 RISPFDSGARRHTSFASLDVMPQFNDEIEIDIKPEDLIVETKRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG+V  CQ  RSQH+N+ +   +L+++LY+LE++++E+     +  ++   WG Q
Sbjct: 242 MVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANEWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IRSYV+ PY +VKD+RT  E +    VLDGDLD+F+ A L  +
Sbjct: 302 IRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYLKSQ 344


>gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258186|gb|EDS72152.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
          Length = 364

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 166/351 (47%), Positives = 232/351 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++L+ + G  +  +    L    T   D   W    +A  +++E + L + I+    +
Sbjct: 14  IDKELSDIAGSINIKSLKDELVKKETLMNDESFWNENDKANKILKEVKSLKSQINSYSSL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  D  +L+E+  E+   +      + L  ++ E++    ++LLSGE DSN+A L +H
Sbjct: 74  EYKKDDISVLVEMLQEDFSQNEADSAMEELLELEKELKVFTIDTLLSGEYDSNNAILSIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRM+ R+AEKRKFK + LE   G+ AGIKS TLLI G NAYG+LK
Sbjct: 134 PGAGGTESQDWAEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKSVTLLISGDNAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+GVHRLVRISP+DSNSRRHTSF+S+ V P + + I +EI+ SD +IDTYRA GAGGQH
Sbjct: 194 GEKGVHRLVRISPFDSNSRRHTSFASVDVEPEIKEDINLEINPSDLKIDTYRAGGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PT +VV CQ ERSQ +NK  A  +L+ KLY++ +++ +E  +  +  
Sbjct: 254 VNKTDSAVRITHLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEIKGD 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +I WG QIRSYV  PY MVKD RT  E ++   V+DGD++ F+ A L +
Sbjct: 314 YGQIAWGNQIRSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLKM 364


>gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC
           13129]
 gi|76363349|sp|Q6NIM2|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae]
          Length = 369

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + ++   R+  L  +  DP LW +   A+ +  E   +   +  +  
Sbjct: 11  QLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKLKKLST 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE     L    + L  +  +VE  + +++LSGE DS +A + +
Sbjct: 71  LRQRIDDLPVMYELADEEG-EDALALADEELAELTADVEALEVKTMLSGEYDSREAVINI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ I V PVV+ +  I+I +S+ R+D YR+SG GGQ
Sbjct: 190 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D  ++A +  +
Sbjct: 309 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLLEAGIRWR 361


>gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
          Length = 368

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  E D     E    L+ +K  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
 gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
          Length = 356

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 145/341 (42%), Positives = 204/341 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  + + +  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDAD 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +EL   E D  +L E    L +++ E++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATVELYALEPDDDMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRT  E      V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343


>gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200]
 gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200]
          Length = 329

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/329 (46%), Positives = 209/329 (63%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E  K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444804|gb|EDP21808.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 373

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 147/350 (42%), Positives = 218/350 (62%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  L      + + +R+  L      P  + +   +K +  E   L   ++  +++Q
Sbjct: 15  AKAVKDLEEALAIEASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQ 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D   +LE+  EE D +++ E  + +  +   VE  Q  ++L+GE D ++A L  HA
Sbjct: 75  GLYDDAETMLEMLDEEYDPAMIPEAEEAVNTVGKAVEELQLMTMLNGEYDHSNAILTFHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GGTE+QDWA ML RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG LK 
Sbjct: 135 GTGGTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGLKSASMMVKGANAYGLLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I++ I   D  +  YR+SGAGGQH+
Sbjct: 195 ENGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVNIRPEDIEMQVYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+VV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  +
Sbjct: 255 NKTSSAVRLIHKPTGIVVNCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EI WG QIRSYV  PY MVKD RTN E  +   V+DGD+D+F+ A L  
Sbjct: 315 NEIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDIDEFIFAYLKA 364


>gi|110834510|ref|YP_693369.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|110647621|emb|CAL17097.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 356

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 229/350 (65%), Gaps = 8/350 (2%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    +RL+ +  + E P +W +   A+ L +ER  L+  +  I +    L D  
Sbjct: 6   GGIFDYVQKSERLTEVERELESPDVWNDPPYAQALGKERSQLEGVVKTIDDASQGLEDTS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL+L +EE D   L E   +L+ ++  V   +F  + SG+ D   AYL++ +G+GGTE+
Sbjct: 66  ALLDLVVEEGDEDTLSEVESDLRDLEKMVADLEFRRMFSGQMDPCSAYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA M+LRMY RW E   FKTE +E   G+ AGIKSAT+  +G  AYGWL+ E GVHRL
Sbjct: 126 QDWAEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATVRFEGDYAYGWLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS++V P VDD I+IEI   + R+DTYRASGAGGQHVN TDSAV
Sbjct: 186 VRKSPFDSGGRRHTSFSSVFVSPEVDDDIDIEIDLGNMRVDTYRASGAGGQHVNRTDSAV 245

Query: 251 RITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           R+T++          VV QCQ ERSQH+NK +A  M++AK+YELE+Q+R       E+SK
Sbjct: 246 RLTYLFKDDGGTEHTVVTQCQSERSQHQNKDKAMKMMQAKVYELEMQRRNAEKQALENSK 305

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 306 ADIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGALDPFIEASLKA 354


>gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
 gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
          Length = 375

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 179/354 (50%), Positives = 247/354 (69%), Gaps = 3/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++ + +     +   D   +++  ++    EDP  W    E+K L++E+  L   +S  +
Sbjct: 14  EIDKSIESFKQVVKEDEINKKIEAIDKMSMEDPDFWNK-KESKQLLKEQASLKKFLSEWE 72

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+     D  +L+EL  E     + ++   NL  +K  V   + + +L+GE D N+A + 
Sbjct: 73  ELLTIREDIDVLIELFKE-GSEEVKEDIISNLNELKKRVSDFELKLILNGEHDINNAIVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGGTE+ DW +ML RMYTRW E++K+K E L++  G+EAGIKS T  + G  +YG+
Sbjct: 132 IHAGAGGTEACDWVSMLFRMYTRWVERKKYKYEILDMLPGDEAGIKSITFNVIGEYSYGY 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE GVHRLVRISP+DSN+RRHTSF+S++V P +DD I+IEI+ESD +I+T+RASGAGG
Sbjct: 192 LKGESGVHRLVRISPFDSNNRRHTSFASVFVLPEIDDEIDIEINESDLKIETFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A  +L+A+LYE E++KR +     E
Sbjct: 252 QHVNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHAMKILKARLYEYEMEKRNKEKEKLE 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SSKTEIGWG QIRSYV+ PY+MVKDLRT  E  +   V+DGD+DDF+K  L ++
Sbjct: 312 SSKTEIGWGNQIRSYVMHPYKMVKDLRTRYETGNVDAVMDGDIDDFIKTYLLME 365


>gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [polymorphum gilvum SL003B-26A1]
 gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
          Length = 323

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 224/309 (72%), Positives = 257/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD  I+ ++ ++  L DN+ L+EL   E D S++ E  + L+ +K EV   Q  
Sbjct: 1   MRERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLKLQMA 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE++AGAGGTESQDWA+MLLRMY RWAEKR +K E LE+HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSF+S WVYPVVDDSIEI+I+E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVVDDSIEIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+A AW ML+A++Y
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKREE A+   +SKT IGWG QIRSYVLQPYQMVKDLRT +E +SP DVL+GDLD 
Sbjct: 241 EAELQKREEAASAEAASKTSIGWGHQIRSYVLQPYQMVKDLRTGVESSSPDDVLNGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 332

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 201/325 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T 
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R 
Sbjct: 61  DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E      G+EAG+KS ++ I G N YG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNTYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG LD F+ A L  +
Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325


>gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
 gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
          Length = 356

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 148/342 (43%), Positives = 205/342 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  +++ +  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E  + L  ++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYDLEPDDDMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    K    E+ +GEEAGIKSAT+ I G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P ++D ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV  PYQMVKDLRT  E T    V+DG LD F++A L 
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETTDVQGVMDGHLDPFIQALLR 344


>gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 370

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 176/347 (50%), Positives = 234/347 (67%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
             L+ L    D +    ++  LN K  + + W +  +A+ +++E       ++   EI D
Sbjct: 17  SSLDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELNSYQRKVNPYDEISD 76

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            + D   +L L   EDD S   E    +  I+ +V   + E+LL+GE D NDA L +HAG
Sbjct: 77  LIEDANDILLLMEMEDDYSSYDEFKKLILNIEKKVSEYKLETLLNGEFDENDAILSIHAG 136

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA+MLLRMY R+A  + FK E L+I   +EAGIKS TL I G +AYG+LKGE
Sbjct: 137 AGGTEAQDWASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSVTLKISGEHAYGFLKGE 196

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHRLVRISP+D+N RRHTSFSS+ V+P +D  I+IEI + D +IDTYR+SGAGGQHVN
Sbjct: 197 KGVHRLVRISPFDANKRRHTSFSSVDVFPDIDGDIDIEIKDEDLKIDTYRSSGAGGQHVN 256

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A   L+AKL  L  ++R+E  +  + + +
Sbjct: 257 TTDSAVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQGNYS 316

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +I WG QIRSYV QPY +VKD RTN E    + V+DGDLD F+ A L
Sbjct: 317 QIAWGSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYL 363


>gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
 gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
          Length = 358

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 144/341 (42%), Positives = 206/341 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR+   +   +  ++  +  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L+E +  L  ++ +++  + E LLSG  D   A L ++AGAGGT++
Sbjct: 63  ATLELHELEPDGDLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE         E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I + D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQ+VKDLRT  E T    V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQLVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|225872704|ref|YP_002754161.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
 gi|225792505|gb|ACO32595.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
          Length = 384

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 5/357 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             Q+  L            L+ + TK  DP LW N   ++ LMR+R+ ++  +++  E+ 
Sbjct: 13  RDQVRDLREYLCPARLRSELAAIETKLADPALWSNPQLSQPLMRDRKRIEEQLAYDTELA 72

Query: 64  DRLCDNLILLELALE-----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
            R  D     ELA E     E D ++  + S  +  +   VE  +  ++LSGE D+ +A 
Sbjct: 73  RRSGDIDAYFELARESEAAGEADANLEADLSREISALGEYVEKLESRTMLSGETDALNAI 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + VH GAGGTESQDWA ML+RMY RWAE++ FKTE  +  DGEEAGIKSAT  I G  A+
Sbjct: 133 VTVHPGAGGTESQDWAEMLMRMYLRWAEQQGFKTEMNDYQDGEEAGIKSATFTIIGDYAF 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L GE GVHRLVRISP+D   RRHTSF+S++V P +DDSI+I+I   + R DTYR+ G 
Sbjct: 193 GQLSGETGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIQIDIKPDELRTDTYRSGGK 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+ +A  MLR++LYE EL K++     
Sbjct: 253 GGQHVNTTDSAVRITHIPTGIVVQCQNERSQHKNREKAMKMLRSRLYEYELAKKQAETKK 312

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            E SK +I +G QIRSYVLQPY++ KD RT +E      VLDG LD F++  L +++
Sbjct: 313 LEDSKLDINFGSQIRSYVLQPYRIAKDHRTKVEVGDVDRVLDGYLDPFIRGYLTMRR 369


>gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
 gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
          Length = 329

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 154/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVR 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|119947032|ref|YP_944712.1| peptide chain release factor 2 [Psychromonas ingrahamii 37]
 gi|119865636|gb|ABM05113.1| bacterial peptide chain release factor 2 (bRF-2) [Psychromonas
           ingrahamii 37]
          Length = 329

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 222/325 (68%), Gaps = 1/325 (0%)

Query: 28  TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87
            + E P +W     A+ L +ER  L+  +  I  +     D L+L+E+A EE+D     E
Sbjct: 3   RELESPEVWSEPERAQALGKERSALELVVDTIDALSAGTEDILMLVEMATEENDQDSFDE 62

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
               +  ++ ++E  +F  + SG  D+   YL++ +G+GGTE+QDWAN+LLRMY RW E 
Sbjct: 63  AQKEVNELEKKLEVLEFRRMFSGNHDACSCYLDIQSGSGGTEAQDWANILLRMYLRWGEA 122

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             +KTE +E+  G+ AGIK AT+   G  A+GWL+ E GVHRLVR SP+DS+ RRHTSF+
Sbjct: 123 HGYKTELMEVSAGDVAGIKGATIRFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFA 182

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S ++YP ++D I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +R
Sbjct: 183 SAFIYPEIEDDIDIQINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDR 242

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK QA   L+AKLYE ELQK+     I E SK++IGWG QIRSYVL     +KDLR
Sbjct: 243 SQHKNKDQAMKQLKAKLYEHELQKQNAEKQISEDSKSDIGWGSQIRSYVLDD-ARIKDLR 301

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           T IE  +   VLDG LD F++A+L 
Sbjct: 302 TGIESRNTQAVLDGGLDKFIEASLK 326


>gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
 gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
          Length = 362

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 150/351 (42%), Positives = 211/351 (60%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++       D       ++ L + +  P  WQ+   A+  M++           + 
Sbjct: 7   ELKSRILSDMVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRG 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D L L  L  E  D S+  E    +  +  E++  +     SG+ DS +A L V
Sbjct: 67  LEQRVNDLLELFALTHE--DPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTV 124

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGG ESQDWA MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG+L
Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFL 184

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRL+R+SP+D++  RHTSF+ + V P  +DS++I+I   D +ID +R+SG GGQ
Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +V    +AVR+THIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     + 
Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKG 304

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +    WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L 
Sbjct: 305 ERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLR 355


>gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
 gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
          Length = 367

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 217/353 (61%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE   S+  E   +L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWA K   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVR+SP+D+  RR TSF+ + V PVV+ +  I++ +++ R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +  +
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 359


>gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii L2-6]
          Length = 373

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 147/347 (42%), Positives = 214/347 (61%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L      D + +R+  L      P  + +   +K +  E   L   ++  +++Q   
Sbjct: 18  VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   +L +  EE D  ++ E  + +  +   V+  Q  ++L+GE D ++A L  HAG G
Sbjct: 78  DDAETMLVMLDEEYDPEMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG LK E G
Sbjct: 138 GTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I   D  +  YR+SGAGGQH+N T
Sbjct: 198 VHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVYRSSGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+ H PTG+VV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + EI
Sbjct: 258 SSAVRLIHKPTGIVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 318 AWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
 gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
          Length = 328

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 160/325 (49%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             D + W N  +A+ ++ E            ++ D L +  I+ EL   + D +I  E  
Sbjct: 1   MADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYELQQVDFDEAIQTELI 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +++++ +++  +   LL+G  D N+A +E H GAGGTESQDW +MLLRMY RWAE R 
Sbjct: 61  QRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESRN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P +D++IEI+I+  D ++DTYRASGAGGQH+N T+SAVRITHIPT  VV  Q +RSQ
Sbjct: 181 DIMPELDETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA   L++KLY+LE++K+ + +      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D+F+ A L  +
Sbjct: 301 METGNVQAVMDGEIDNFIDAYLKWQ 325


>gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
 gi|212674150|gb|EEB34633.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
          Length = 366

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 227/347 (65%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD   + QRL+ + T+   P+ W N      L+RE++ L++ ++ +  ++    
Sbjct: 15  TTFGGVFDVAASEQRLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTCHD 74

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D    LELA+E  +   L+  +     +   ++  +   LLSGE D+ DA LE+H GAGG
Sbjct: 75  DMHEWLELAVESGEDEALESLAKQQDSLDALLDETELVMLLSGEEDNQDAILEIHPGAGG 134

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDWA MLLRMYTRWA +R F  E L+   G+EAGIKS TL I GP+A+G+LK E+G+
Sbjct: 135 TESQDWAEMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGI 194

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D++ RRHTSF+S+ V P V D I+++I E+D R DT+R+SG GGQ VNTT 
Sbjct: 195 HRLIRISPFDASGRRHTSFASVDVMPDVGDDIQLDIKETDLRFDTFRSSGPGGQSVNTTS 254

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+  QCQ E+SQH NK  A  +L+A+LY LELQKRE       + K  I 
Sbjct: 255 SAVRVTHIPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIA 314

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +G QIR+Y LQPY++VKD RTN E      VLDG +D F    L  +
Sbjct: 315 FGSQIRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQFQHDYLLYR 361


>gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974]
 gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
 gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
          Length = 329

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 154/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|15594420|ref|NP_212208.1| peptide chain release factor 2 [Borrelia burgdorferi B31]
 gi|2687953|gb|AAC66459.1| peptide chain release factor 2 (prfB) [Borrelia burgdorferi B31]
          Length = 348

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+A  E D + L+        ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
 gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
          Length = 365

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 225/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D D  +  +     KT  P  W N   A+  M+  Q     +    + 
Sbjct: 10  LLDRLGALRRYLDIDAKLIEIENEEEKTLAPDFWNNAQVAQAQMKVLQSKKKWVKDFDDA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D  +LLE   E D     +E  ++  + K  +E  +F+++LS E D   A L++ 
Sbjct: 70  KILIADLEVLLEFLKEGD--VTAEEVENHYNKAKTHIEDLEFKNMLSDEGDELTAILQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  WAEK  +K + L   +G+ AGIK+ TL I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWAAMLMRMYLMWAEKNGYKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINPADIEITTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+ + C   RSQH N+A A  ML+++LYE+EL+K++E  +  E+ 
Sbjct: 248 VNKVETKVQLTHKPTGIQISCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DG +D F+KA L +
Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDAVMDGQIDPFLKAYLMM 358


>gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
 gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
          Length = 348

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 165/349 (47%), Positives = 219/349 (62%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +      FD +   ++   L  ++ DP  W    +AK +  +   L++++     ++   
Sbjct: 1   MRTCRTAFDPEGLRRQADELRLRSSDPAFWS-TGDAKEVSSQLSRLESSLEHWDHLERMF 59

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   + EL   +DD  +  E          EVE++Q + LLS   DS DA + +HAG+G
Sbjct: 60  SDLETMAELLEIDDDPELAAEFDAKSGEYSREVEHRQMDLLLSEAYDSRDAIVTIHAGSG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G +SQDWA ML RMY RW E+  +KT  L++   EEAG+KS T  + G  AYG+LK E G
Sbjct: 120 GLDSQDWAEMLYRMYLRWCEENGYKTRLLDLQQDEEAGLKSVTFTVSGSCAYGYLKSETG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+N RRHTSFS + V P + D +E+ I + D RIDTYR+SGAGGQHVN T
Sbjct: 180 VHRLVRISPFDTNKRRHTSFSGVVVSPQLPDDVEVAIRDEDLRIDTYRSSGAGGQHVNMT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQH NKA A  +LR+KLY+L++Q R +  +     K E 
Sbjct: 240 DSAVRITHLPTGIVVSCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKES 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG QIRSYVLQPY +VKD RT  E  + + VLDGDLD F+ A L  +K
Sbjct: 300 SWGHQIRSYVLQPYTLVKDHRTGEETGNVAAVLDGDLDRFILAYLRWRK 348


>gi|225450605|ref|XP_002277995.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 434

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 232/352 (65%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  ++ +     W   V RL  L+ +   P LW N + A  + RE   L   +  +K +
Sbjct: 72  IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 131

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV 
Sbjct: 132 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 191

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K
Sbjct: 192 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 251

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ +RA GAGGQ
Sbjct: 252 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 311

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      
Sbjct: 312 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 371

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+I WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+ 
Sbjct: 372 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 423


>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
 gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 371

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA  EDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RSRLDDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
 gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
          Length = 371

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 204/353 (57%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L+ +      D   + ++ L   +     W +   A+  M     L + ++ I   
Sbjct: 12  LTARLDEVESYLHIDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGIDAA 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +L D    LEL  E +D  +L E+      +  ++   +  S  + E D  DA + V 
Sbjct: 72  HAKLEDAKAALELGSETEDAGLLAESEHLADSLARDLSELELSSWFTDELDHGDAIVTVK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+QDWA+ML  MY R+A +R +  +  E    E  GI  AT  + G NAYG L+
Sbjct: 132 PGQGGLEAQDWADMLFHMYLRYAARRGWSVDIAEATPAEVIGIDRATFTVSGKNAYGMLR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP D   RR TSF+ + V PV+   IE++I  SD RID Y ASG GGQ 
Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPAEIEVDIDPSDLRIDVYHASGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTGVVV CQ ERSQ +NKA A N+LR++LYE+E +KRE   +     
Sbjct: 252 VNTTDSAVRITHIPTGVVVTCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDELRGP 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354
           K EI +G QIRSYVL PYQ+VKDLRT  E  +   VL DGDLD F+ A    +
Sbjct: 312 KHEISFGNQIRSYVLYPYQLVKDLRTGEETGNVDAVLDDGDLDPFIIAYHRWR 364


>gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334]
 gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334]
          Length = 329

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 154/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQ 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  EELVTQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|307718929|ref|YP_003874461.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
 gi|306532654|gb|ADN02188.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
          Length = 361

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 168/349 (48%), Positives = 230/349 (65%), Gaps = 1/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R+    GG+F+  +  +++S L  +T  P LW +   A+ ++   + L         +
Sbjct: 1   MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L +LA EE+D S  +E    L   + +    +   LL+ E D  DAYL +H
Sbjct: 61  VQEVEDIHTLYDLAAEENDPSQEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYLTIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG  A+G+LK
Sbjct: 121 AGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFGYLK 179

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I   D RIDTYR+ GAGGQH
Sbjct: 180 GEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAGGQH 239

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PTG+VVQCQ ERSQHKN+  A  MLR++LYE   Q REE        
Sbjct: 240 VNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKKAIE 299

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYV QPY MVKDLRT +E  +   V+DGDLD F++A L
Sbjct: 300 KKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 348


>gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
 gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
          Length = 331

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 172/328 (52%), Positives = 229/328 (69%), Gaps = 1/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            ++ +   P +W     A+ L +ER  L + +S + E+ + +     L ELA+EEDD   
Sbjct: 2   EVDRELAVPSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGT 61

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            QE    L  ++  +   +F+ + +GE D N+AYL++ AG+GGTE+QDWA+MLLRMY RW
Sbjct: 62  AQEMIAELDAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLRMYLRW 121

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            EK  FKT   E+ +GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 122 GEKHDFKTGLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+ + +VVQCQ
Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNLVVQCQ 241

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH+NKA A   LRAKLYELE++ R+      E +K +IGWG QIR+YVL     +K
Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRSRQAEKQAAEEAKADIGWGSQIRNYVL-DQSRIK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           DLRT +E  +   VLDGDLD F++A+L 
Sbjct: 301 DLRTGVEIGNTQGVLDGDLDPFIEASLK 328


>gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
 gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
          Length = 336

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 158/327 (48%), Positives = 215/327 (65%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  +P  W    +A+  ++    L + ++  + +   L D  +L EL  EE+D +  
Sbjct: 2   LERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAAA 61

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +  +V   +   LLSG  D  +A + +HAGAGGTE+QDW  MLLRMYTRWA
Sbjct: 62  AEVKQGLAVVAQKVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYTRWA 121

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+R FK E L++  G+EAG KSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+  RRHTS
Sbjct: 122 ERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRRHTS 181

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P VDD ++++I+  D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ 
Sbjct: 182 FASVDVLPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVVTCQN 241

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  ML+A+L +LEL+K+E         + EI WG QIRSYV  PY +VKD
Sbjct: 242 ERSQLANRLAAMKMLKARLIDLELRKKEAELAALRGEQQEIAWGSQIRSYVFHPYSLVKD 301

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
            RT  E  +   V+DG++D F+ A L 
Sbjct: 302 HRTGHETGNVGAVMDGEIDSFIAAYLR 328


>gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223624|sp|A0RQM7|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 369

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 229/354 (64%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL+ ++  +  +    +   RL  +      P  W ++ +A  + +E+  + N +   K 
Sbjct: 12  KLNTKVQNISRVIKPQDIEIRLKEIEDIENRPEFWNDIKKASEIGKEKTKISNMLCKFKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   L ELA  EDD   +    ++ Q ++ ++   +   +LSGE DS +A + +
Sbjct: 72  VKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGEDDSKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + ++KG NAYG+L
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P VDD I IEI E D R+D YRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ +RSQHKNKA A  ML+++LYE EL K++E  N    
Sbjct: 252 HVNKTESAVRITHIPTGIVVQCQNDRSQHKNKATAMKMLKSRLYEFELMKQQEANNAI-- 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   +++ L  +K
Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTDAILDGDIKKIIESVLISQK 363


>gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
 gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
          Length = 327

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N   A+ ++ E   L   ++      +   +  + LEL  EEDD  + ++  
Sbjct: 1   MLDPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDLHEDVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++++   ++   +   LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TL I+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P     IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH PTG VV CQQERSQ
Sbjct: 181 EVMPEFTGEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY L++++ E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ + L  K
Sbjct: 301 FETGNLGAVMDGDIDGFINSLLRSK 325


>gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C]
          Length = 333

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 216/320 (67%), Positives = 264/320 (82%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW +  +A+ +MRERQ+L+++++  +     L + + L+ +  EE+D  I+ E  + +++
Sbjct: 2   LWNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ KQ  +LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E 
Sbjct: 62  LKSEIDKKQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VD++IEI++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI T +VVQCQ ERSQHKNKA
Sbjct: 182 VDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQHKNKA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEATNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301

Query: 335 PSDVLDGDLDDFMKATLAIK 354
           P  VL+GDLD F++A LA +
Sbjct: 302 PQTVLNGDLDTFIEAALAQR 321


>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
 gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
          Length = 371

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D     + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHTPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQEKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
 gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
          Length = 321

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 226/309 (73%), Positives = 263/309 (85%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ +K  + +L DNL L+E+  EE D  I++E    L+ ++ +V  +Q E
Sbjct: 1   MRERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTKQQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+   K E LEIHDGEEAGI
Sbjct: 61  SLLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSFSSIW YPV+DDSI+++I+E
Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVIDDSIDVDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+CRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 SECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARIY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKTEIGWG QIRSYVLQPYQ+VKDLRT  E TSP DVLDG LD 
Sbjct: 241 EAELKKREEAANDEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGTESTSPQDVLDGKLDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
 gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
          Length = 351

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 156/346 (45%), Positives = 219/346 (63%), Gaps = 5/346 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD  +    L  L  + E+P +W +   A+ LM+    L   I    +   R  D L
Sbjct: 4   RSIFDLSSREMLLEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGL 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E     +D S+ ++    +  ++ E++ ++  +LLSG  D  +A L ++AGAGGT+S
Sbjct: 64  ELAE----SEDESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGTDS 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY RW E+R F +E L+  +GEEAGIKS T+ + GP AYG+L+GE+GVHRL
Sbjct: 120 QDWASMLMRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVHRL 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+D+  RRHTSF+ + V P + +   EI+I+  D RID YR+S AGGQ+V    +A
Sbjct: 180 VRLSPFDAAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATA 239

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+VV CQ ERSQ +N+  A  +LRA+L EL+ Q++E           +  WG
Sbjct: 240 VRITHIPTGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAEWG 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            QIRSYVL PYQ+VKD RT  E  +   VLDG+LD F++A L  +K
Sbjct: 300 SQIRSYVLHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQK 345


>gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 346

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 177/346 (51%), Positives = 241/346 (69%), Gaps = 3/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +N  G +FD+D   +RL+ +  + ED  +W N   A+ L R++  L+N +   + I + L
Sbjct: 1   MNLYGTIFDYDVKKERLTEVLMELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                LL   L E+D S++QE + + Q +  E+E  +F  + SG+ D N+A+L++ +G+G
Sbjct: 61  ETLTELL--ELAEEDESLMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G
Sbjct: 119 GTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN T
Sbjct: 179 IHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE+ELQKR    N  E SK +I
Sbjct: 239 DSAVRITHIPTNIVVQSQSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADI 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E T+   VLDGDLD F++A+L 
Sbjct: 299 GWGSQIRSYVL-DQSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 343


>gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
 gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
          Length = 325

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        E+Q+   +  + LE+   ++D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEML--DEDDSVQAELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSFSS+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 YEIAQVDKVMDGDIDGFIDAYLKWR 323


>gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
          Length = 391

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 164/342 (47%), Positives = 215/342 (62%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG FD+     RL  +  +   P  W        L+RE+  L + ++  + +     D 
Sbjct: 40  FGGGFDYAETKTRLEAIEHQLSKPGAWDKPGALTPLLREKTQLSDKLAMYESLAQAKDDL 99

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LELA E  D   +      +   K  +   +  ++ + E D  +A LE+H GAGG E
Sbjct: 100 DAWLELAHESRDEEAMAGLDGQISVFKERLGITELATMFAFEHDKGNAILEIHPGAGGVE 159

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWA MLLRMYTR+AE++ FK   L+   GEEAGIKS TL I+G  +YG LKGE GVHR
Sbjct: 160 SQDWAEMLLRMYTRFAERKGFKITQLDYQVGEEAGIKSVTLQIEGLYSYGLLKGESGVHR 219

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           L+RISP+DS+ RRHTSF+S+ VYP +DD IEIE+ + D RID +R+SG GGQ VN T SA
Sbjct: 220 LIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSA 279

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+V QCQ E+SQH+NKA A  +++A+LYE ELQK EE       +K  I WG
Sbjct: 280 VRITHLPTGIVAQCQNEKSQHRNKATALRLVKARLYERELQKIEESRRQDYQAKGAIAWG 339

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+Y LQPY++VKD R+N E  +    LDGDLD  ++  L
Sbjct: 340 SQIRTYTLQPYRLVKDHRSNSETGNVDAFLDGDLDAMIRNHL 381


>gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
 gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
          Length = 329

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 154/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45]
 gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45]
          Length = 397

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 191/353 (54%), Positives = 241/353 (68%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ LG   DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+     
Sbjct: 35  KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSS 94

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+E+   E+D  ++ E    L+ +  +   K+ E+LL GEAD ND +LE+
Sbjct: 95  IKQELSDNVELIEMGEMEEDDEVVSEAEAALRALAEKAGQKELEALLDGEADGNDTFLEI 154

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA ML RMY RWAEKR +  E      G EAG KS    I G NAYGWL
Sbjct: 155 NAGAGGTEACDWAAMLQRMYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWL 214

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+     R TSF+S+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ
Sbjct: 215 KSESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 273

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT +VV    E+SQH+N+  A   L+++LY++EL KR    N    
Sbjct: 274 HVNTTDSAVRITHIPTNIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQHE 332

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA +
Sbjct: 333 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQQ 385


>gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803]
 gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803]
          Length = 356

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 148/342 (43%), Positives = 206/342 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  +   Q  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L +++ +++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYDLEPDDDMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE R  K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV  PYQMVKDLRT  E      V+DGDLD F++A L 
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLDPFIQALLR 344


>gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
 gi|150274357|gb|EDN01434.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
          Length = 373

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 227/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  +L+ LG     + A + L  L +++     W N+ +A+ + +  + L + +   K+
Sbjct: 13  NLKPELDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
                 D L L E+  EE+D S++ E  +   ++   +E  +  +L +GE D N+  L +
Sbjct: 73  RLGEWEDLLTLCEMGNEEEDESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDWA MLLRMYTRWAE+  F+ + ++  DG+EAGIKSAT++I+G NAYG L
Sbjct: 133 HAGAGGTEAQDWAQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR+SP+D+N+RR TSF+++ V P + +  ++EI   +  +  +R+SGAGGQ
Sbjct: 193 RSEHGVHRLVRVSPFDANARRQTSFAAVEVMPDLPEDADVEIRPEEYEMQVFRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVR+ H  TG+VV CQ ERSQ +NK     MLRAKL EL++Q+  E  +  + 
Sbjct: 253 HINKTSSAVRLIHHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +I WG QIRSYV  PYQ+VKD R+  E ++ + V+DGD+D F+ A L  +
Sbjct: 313 VQLKIEWGSQIRSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYLKCE 365


>gi|116629958|ref|YP_815130.1| protein chain release factor B [Lactobacillus gasseri ATCC 33323]
 gi|238854078|ref|ZP_04644428.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282851440|ref|ZP_06260805.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311110410|ref|ZP_07711807.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
 gi|116095540|gb|ABJ60692.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833312|gb|EEQ25599.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282557408|gb|EFB63005.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311065564|gb|EFQ45904.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
          Length = 332

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 151/324 (46%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ L+ E   +       K ++++  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDDQEQAQSLINETNRMKEKSENFKRLEEKFEDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  KEMFSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSVRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+++     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LDDF+ A L  
Sbjct: 301 FETSDVNGVMDGKLDDFIYAYLQW 324


>gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 338

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 153/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + + A+   +E   L         +Q+   +  + LE+   
Sbjct: 1   MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E   +L R+   +   +   LLS   D ++A LE+H G+GGTE+QDWA+ML 
Sbjct: 59  DEDDSVKEELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|312130867|ref|YP_003998207.1| bacterial peptide chain release factor 2 (brf-2) [Leadbetterella
           byssophila DSM 17132]
 gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 157/352 (44%), Positives = 229/352 (65%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G+FD+DN  ++L  L  +   P  W +   A+ +++E Q L N     +E 
Sbjct: 9   LRARVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTEAYEEA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D   L E   E +      +T    ++    +E  + + +LS E D   A +E++
Sbjct: 69  EASISDLETLFEFYQEGEVEEEEVDT--EAKKTVQIIEELELKKMLSSEEDQFSAIIEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML RMY  WA+K  +K   ++  DG+ AGIKSA++ I GP AYG+LK
Sbjct: 127 SGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGPLAYGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++ YP+VDD+IE+E+ ++D    T R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLVDDTIEVEVKDADIEWQTSRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+V+ CQ ERSQ  NK  A NML+++LY++EL+KR       E+S
Sbjct: 247 VNKVETKVQLTHKPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIR+YV  PY++VKD RT  E +    V+DG++DDF+KA L + 
Sbjct: 307 KKKIEWGSQIRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYLMLD 358


>gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
 gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
          Length = 325

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 175/324 (54%), Positives = 228/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W +   A  L RER  L   +S ++ +   L D   LLELA  E+D + L E  
Sbjct: 1   MEQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTENDEATLAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++   + E+E  +F  + SGE D  +A+L++ AG+GGTE+QDWANMLLRMY RW E+++
Sbjct: 61  ADVTGYQSEIEALEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRWVEQKR 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E +E  +GE AGIKSATL I+G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+++
Sbjct: 121 FTAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V P +DD++E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQ
Sbjct: 181 FVSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNKA A   LRAKLYELE+ KR E A+  E SK +IGWG QIRSYVL     +KDLRT 
Sbjct: 241 HKNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWGSQIRSYVL-DQSRIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E      VL+G LD F++A+L  
Sbjct: 300 VEIGHTQAVLNGALDPFIEASLKA 323


>gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
 gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis]
          Length = 550

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 154/352 (43%), Positives = 226/352 (64%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +   P LW + + A  + RE   L      +   
Sbjct: 142 IAQSIQVIKKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHGSLMAKRKEVTAF 201

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EEDD  +  E+   L  ++   + K+ E+LL+GE DS   Y+EV 
Sbjct: 202 ERELLEHIDMIKLAREEDDAELESESLKALFHMRRNSKEKELEALLAGEQDSCSCYIEVQ 261

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  A+G+ K
Sbjct: 262 SGAGGTESMDWAKMVMQMYKLWAQRRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 321

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ YR+ G GGQ
Sbjct: 322 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQ 381

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SAVRI HIPTGV   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 382 HANTTESAVRIVHIPTGVTATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQ 441

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+G++D F+ + L+ 
Sbjct: 442 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLSA 493


>gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK]
 gi|189040001|sp|A4TDE5|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           gilvum PYR-GCK]
          Length = 372

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 216/355 (60%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + + D    R+  L +   DP LW +   A+ +  +  H  N +  ++E+
Sbjct: 12  LDTTLTTVERVVNVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+         E    L +++ ++   +  +LLSGE D  +A +
Sbjct: 72  RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +       WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365


>gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316]
 gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316]
 gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
           13813]
          Length = 337

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +  +LLE+   
Sbjct: 1   MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 59  DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H]
 gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter
           oxydans 621H]
          Length = 322

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 199/307 (64%), Positives = 245/307 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L N I  ++ I+  +   L L+ELA  E D S++Q+    L+ I  +V  ++ E
Sbjct: 1   MRERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRKREIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEADSND Y+EV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AGI
Sbjct: 61  SLLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEGEQAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEI+I++
Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIDIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT+RASGAGGQHVN TDSA+RITHIPTG+VV CQ +RSQH+N+A+A  MLRA++Y
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKRE  A   E+SKT+IGWG QIRSYVL PYQ+VKDLRT +EK +P  VLDG LDD
Sbjct: 241 EAELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPGAVLDGALDD 300

Query: 346 FMKATLA 352
           FM A+LA
Sbjct: 301 FMSASLA 307


>gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
 gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
          Length = 332

 Score =  351 bits (901), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 208/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W +  +A+ L+ E   L        E++    D    LEL  EE D  + +E  
Sbjct: 1   MAEPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKEEPDKELQEEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL  ++      + + L+SG+ DS++A +E+H GAGGTE+ DWA+MLLRMY R+ E   
Sbjct: 61  NNLTHLQSAFHNYELDLLMSGKYDSHNALVEIHPGAGGTEAMDWASMLLRMYQRYCESVG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ + G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGVKSVSIRVSGKNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRTN
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG L  F+ A L  +
Sbjct: 301 YETADVKGVMDGKLQPFIYAYLQWR 325


>gi|223038905|ref|ZP_03609197.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
 gi|222879878|gb|EEF14967.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
          Length = 366

 Score =  351 bits (901), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+   ++   RL  +     D + WQ++ +A  + +E+  + N ++     
Sbjct: 13  LNTKIENIAGVVKPESIKTRLKEIEELENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D   L ELA  E+D   +         ++ ++   +   LLSGE D  +A + +H
Sbjct: 73  KSAVDDAKDLYELANSENDEETINSLFAEAGELEDKIVNLEISMLLSGEDDGKNAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML+++LYELEL K++E A  G   
Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA--GSIE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363


>gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
 gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
          Length = 321

 Score =  351 bits (901), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 219/309 (70%), Positives = 254/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D + + E  + ++ ++ E   +Q E
Sbjct: 1   MRERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAIKAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMEASLAQR 309


>gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_36I24]
 gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium
           HF0500_02A10]
          Length = 334

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 163/323 (50%), Positives = 222/323 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W N  +A  ++ E   L N +    ++  ++ +   + +L   EDD  +  E  
Sbjct: 1   MATAGFWDNQDKASEVIAESNRLKNWVKPWHDLNTKVSELTEIRDLLEHEDDEDLTHELI 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + +I+  +E  +  ++L G  D   A L VH GAGG ESQDWA ML RMY+RWAE   
Sbjct: 61  SEVDKIEGPIEDLELRTMLQGPDDHRGAILTVHPGAGGLESQDWAEMLTRMYSRWAENHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +    L++  G+EAGIKSATL + G +AYG+LK E+G+HRLVRISP+D+ SRRHTSF+S+
Sbjct: 121 YDLNVLDMQPGDEAGIKSATLEVVGGHAYGYLKAEKGIHRLVRISPFDAQSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP+VDD IEIEI+ESD R+DT+RASGAGGQHVN TDSA+RITHIPTG+ V CQQERSQ
Sbjct: 181 FIYPLVDDEIEIEIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+A A  ML+A LYE  L+++E+     E++KT+IGWG QIRSYV QPY MV D RT+
Sbjct: 241 HMNRATAMKMLQASLYERALEEKEQEKEAIEATKTDIGWGNQIRSYVFQPYTMVNDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           ++ +  + V+DG+LD F++A L 
Sbjct: 301 LKISDVNKVMDGNLDPFIEAYLK 323


>gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
 gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
          Length = 315

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 208/309 (67%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER HL+N I+ +  +Q  L DNL L E+A  E D + + +    L  +K      + E
Sbjct: 1   MQERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRAGRAELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+N+A++E+HAGAGGTES DWANML RMY RWA++   K + +E   GEEAGI
Sbjct: 61  ALLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+WVYP +DD+IEIE++E
Sbjct: 121 KSATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEIDDNIEIEVAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCR+DT+RASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQ+REE AN   +SKT+IGWG QIRSYVLQPYQMVKDLRT +E  SP  VLDGDLD 
Sbjct: 241 EMELQRREEEANAQAASKTDIGWGHQIRSYVLQPYQMVKDLRTGVESPSPDAVLDGDLDA 300

Query: 346 FMKATLAIK 354
           FM A LA +
Sbjct: 301 FMGAALAQR 309


>gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
 gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
          Length = 329

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 153/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSYEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|255323494|ref|ZP_05364625.1| peptide chain release factor 2 [Campylobacter showae RM3277]
 gi|255299531|gb|EET78817.1| peptide chain release factor 2 [Campylobacter showae RM3277]
          Length = 366

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+   ++   RL  +     D + WQ++ +A  + +E+  + N ++     
Sbjct: 13  LNTKVENIAGVVKPESIKARLKEIEEMENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D   L ELA  E+D   +         ++ ++   +   LLSGE D  +A + +H
Sbjct: 73  KSAVDDAKELYELANSENDEETINSLFAEADELEDKIVNLEISMLLSGEDDGKNAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML+++LYELEL K++E A  G   
Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA--GSIE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363


>gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
 gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
          Length = 357

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 209/352 (59%), Gaps = 2/352 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M L      +   FD       ++ L   +  P  WQ+   A+ +M++           +
Sbjct: 1   MNLRAAFFLIWCDFDVSAKELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWR 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++ R+ D   L  L+ E  D S+  E    +  +  E+   +     SG+ D+ +A L 
Sbjct: 61  GLERRVNDLTELAVLSYE--DPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALLT 118

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VHAGAGG ESQDWA MLLRM+ RWAEK+ F  E L+   GEEAG+KSATL I G  AYG+
Sbjct: 119 VHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYGF 178

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRL+R+SP+D++  RHTSF+ + + P  +DS++I+I   D +I+ +R+SG GG
Sbjct: 179 LKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIEMFRSSGPGG 238

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+V    +AVRITHIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     +
Sbjct: 239 QNVQKVSTAVRITHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLK 298

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +    WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L 
Sbjct: 299 GERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYLR 350


>gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
 gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
          Length = 325

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 151/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT
           5716]
          Length = 332

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 162/324 (50%), Positives = 207/324 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+  +     L         +QD++ +  +  E+   E D  +  E  
Sbjct: 1   MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           DN   ++  +   + E LL G  D +DA LE+H GAGGTE+QDW  MLLRMY RWA +  
Sbjct: 61  DNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      GEEAGIKS TLLIKG NAYG+L  E+GVHRLVRISP+DS +RRHTSF+S+
Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E      V+DGDLD F+ A L  
Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324


>gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae
           TIGR4]
 gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
 gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
 gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
 gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
 gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
          Length = 325

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E  K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 366

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 155/352 (44%), Positives = 219/352 (62%), Gaps = 3/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D D   +R   L     DP LW +   A+ +  +  H  + +  ++ +
Sbjct: 12  LSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQSTLKKVRAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA EE + +  +   D    ++  +E  + +++LSGE D  DA + + 
Sbjct: 72  RQRVDDLPVMYELAEEEGEGT--ELADDERADLRQAIESMEVQTMLSGEYDERDAVVTIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK   K +  +    EEAGIKSAT  +  P  YG L 
Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVSDPYMYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I +SD R+D YR+SG GGQ 
Sbjct: 190 VEQGTHRLVRISPFDNQARRQTSFAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +N+A A  +L+++L E +  + E+       +
Sbjct: 250 VNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRLLERKR-QEEQAEMDALGA 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             E  WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +  +
Sbjct: 309 GGEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAGIRWR 360


>gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
 gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
          Length = 372

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 218/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   +  +G + D D   + ++ L  +   P LW +   A  +      L   ++   E
Sbjct: 12  QLQATMQTIGQVLDLDAMRKEIADLGEQVAAPDLWDDQDNATRVTGRLSLLQGELNKFTE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  +++E+A EE D   L E+   L R+K  VE  +  +LLSGE DS +A + +
Sbjct: 72  LSSRIEDLELMVEMAQEEGDADTLAESEAELGRVKKAVESLEIRTLLSGEYDSREALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML+RMY RWAE+ K+  E  +    EEAG+KSAT  I  P AYG L
Sbjct: 132 RSGAGGVDAADFAEMLMRMYVRWAERNKYPVEVFDTSYAEEAGLKSATFAIHAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EIEI E+D ++D YR+SG GGQ
Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIKVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A  +L+AKL  L+  + E      + 
Sbjct: 252 SVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAAMIVLKAKLLALKKAEEEAQLKELKG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+R+YVL PYQ+VKDLRT  E  +P  V DGD+D F++A +  ++
Sbjct: 312 DV-AASWGDQMRNYVLNPYQIVKDLRTTYEVGNPQAVFDGDIDGFLEAGIRWRR 364


>gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
 gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
          Length = 329

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 153/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|331090528|ref|ZP_08339381.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405871|gb|EGG85399.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 337

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 155/331 (46%), Positives = 226/331 (68%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L  K E+P  W++   ++ +MRE + L + +   + +     D  +L+E+  E++D S
Sbjct: 2   EELQKKIEEPGFWEDTETSQKIMRELKGLQSFLENAESLLTSYEDIAMLIEMVYEDNDES 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           ++ E    +++ +   E  +  +LLSG  D ++A + +HAGAGGTES DWA+ML RMY+R
Sbjct: 62  MVGEIRREIRQFEKNFEEIRINTLLSGPYDKDNAIVTLHAGAGGTESCDWASMLYRMYSR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE++ F    L+  DG+  GIK+ T  + G NAYG+L+ E+GVHRLVRISP++S  +R 
Sbjct: 122 WAERKGFSISVLDYLDGDITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSAGKRQ 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S  V P ++D I+IEI+E D ++DTYRASGAGGQHVN T SA+RITH+PTG+VVQC
Sbjct: 182 TSFASCDVIPDIEDEIDIEINEDDLKVDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQH N+ +A  ML+AKLY ++ Q++ +  +       EIG+G QIRSYV+QPY +V
Sbjct: 242 QNERSQHSNREKAMQMLKAKLYLIKQQEQADKVSDIRGEVKEIGFGNQIRSYVMQPYTLV 301

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KD RTN+E  + + VLDGD++ F+ A L  +
Sbjct: 302 KDHRTNVENGNVTAVLDGDIEPFINAYLKKR 332


>gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 329

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 154/322 (47%), Positives = 217/322 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W N+  A+ +    + + + I      Q  + D  +L+E+A+EE+D S++ E  
Sbjct: 1   MQESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMAIEENDSSLVTEVY 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +   VE  + E +LSGE D+N+A + +H+G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 61  NEISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKA 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++  G+EAGIKSATL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 FNVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +     +EI+ SD ++DTYRASGAGGQHVN T+SA+RITHIPTG+VVQCQ ERSQ
Sbjct: 181 EVTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 241 IQNRETALNMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           I+      V+DG+LD F+K  L
Sbjct: 301 IQVNDVYKVMDGELDVFIKGYL 322


>gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
 gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
          Length = 332

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 207/324 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+  +     L         +QD++ +  +  E+   E D  +  E  
Sbjct: 1   MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N   ++  +   + E LL G  D +DA LE+H GAGGTE+QDW  MLLRMY RWA +  
Sbjct: 61  NNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      GEEAGIKS TLLIKG NAYG+L  E+GVHRLVRISP+DS +RRHTSF+S+
Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E      V+DGDLD F+ A L  
Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324


>gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R]
 gi|24638152|sp|Q8NS78|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166223627|sp|A4QCD3|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC
           13032]
 gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 368

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 158/354 (44%), Positives = 221/354 (62%), Gaps = 5/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + +      R+  L  +  DP LW +   A+ +  E  H+   +  I +
Sbjct: 11  ELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITD 70

Query: 62  IQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ R+ D  I++ELA EED D SI +E    L  ++  ++  + +++LSGE D+ +A + 
Sbjct: 71  LRQRIEDLPIMVELAEEEDGDTSIAEE---ELADLRSLIDALEVKTMLSGEYDAREAVIN 127

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG 
Sbjct: 128 IRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQ 187

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I ++D R+D YR+SG GG
Sbjct: 188 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGG 247

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E       
Sbjct: 248 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAEMDAL 306

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +     WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D  ++A +  +
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWR 360


>gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1]
 gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides
           sp. BAV1]
          Length = 356

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 148/339 (43%), Positives = 209/339 (61%), Gaps = 2/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD       ++ L T + +P  WQ+   A+  M++           + ++ R+ D   L 
Sbjct: 14  FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            L+ E  D S+  E    +  +  E++  +     SG+ D+ +A L VHAGAGG ESQDW
Sbjct: 74  VLSRE--DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG+LK E GVHRL+R+
Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG GGQ+V    +AVR+T
Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     +  +    WG QIR
Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L 
Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 350


>gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           bromii L2-63]
          Length = 372

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 161/350 (46%), Positives = 224/350 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L         +  +  L  K  +P  W +V +++ +++    L   +   + +
Sbjct: 14  LKPEIDDLSDALGMKGMLSEIQQLELKATEPGFWDDVEKSQKVLQRTGSLKGKVEAYEGL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L+ELA EE+D S+L+E    ++ +K  +E ++ ++LL+GE D N+A L  H
Sbjct: 74  VAKYEDTHALIELANEEEDESLLEEAESEVEAVKENLEKQRLQTLLTGEYDKNNAILTFH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA ML RMYTRWAE   FK + ++  DG+EAG+KSA LL++G NAYG+LK
Sbjct: 134 AGSGGTEAQDWAEMLYRMYTRWAEAHGFKVKEVDYLDGDEAGLKSAVLLVEGENAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+DS  RRHTSFSS+ V P +    E+ I   D ++D YRASGAGGQ 
Sbjct: 194 SEAGVHRLVRVSPFDSAGRRHTSFSSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQK 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+THIPTG+VV  Q ERSQ++N+  A NML +KL E++ ++  E     +  
Sbjct: 254 VNKTSSAVRLTHIPTGIVVASQVERSQYQNRDVAMNMLISKLVEIKEREHLEKIEDIKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + EI WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L 
Sbjct: 314 QKEITWGSQIRSYVFMPYTMVKDHRTGFETGNIQAVMDGDLDGFINAYLK 363


>gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300]
 gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300]
          Length = 329

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   
Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+ KLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RT+ E      V+DGDLD F+ A L  +
Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
 gi|187774165|gb|EDU37967.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
          Length = 325

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 151/323 (46%), Positives = 219/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + +S    +++ + D + L ++  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIEDIIGLSQMLSEEDD-DMGKEIL 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E++  + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L+++L EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSRLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDAVMNGDINIFIIEYLK 322


>gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0500_22O06]
          Length = 356

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 181/345 (52%), Positives = 236/345 (68%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG FD ++  +RL  L+ +   P  W +  +AK  + E   L   +     +  R+ 
Sbjct: 4   KSLGGTFDLESRQERLRVLDQEMVQPGFWDSPDQAKATIDESNRLKGWVDPWSSLDARVS 63

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +   L+EL  EE+D  +  E +  L  ++ ++E  +  ++L G  D  DA + +H GAGG
Sbjct: 64  ELTALVELLEEEEDADLEAEFTRGLASVEKDLEVLEVRTMLQGGDDHRDALVTIHPGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ESQDWA ML+RMYTRW+E+R F  E L++   EE GIKSATL IKG  AYG+LK E GV
Sbjct: 124 LESQDWAGMLMRMYTRWSERRGFGVEVLDLQSAEEGGIKSATLEIKGECAYGYLKAEGGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D  SRRHTSF+S+++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TD
Sbjct: 184 HRLVRISPFDQQSRRHTSFASVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTG+V  CQQERSQHKN++ A  MLRA LY+  LQ++E    + E++KTEIG
Sbjct: 244 SAVRITHEPTGIVTTCQQERSQHKNRSTAMKMLRAALYQHALQEQERERAVLEATKTEIG 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G QIRSYV QPY MV D RT ++ T+   V+DGDLD F++A L 
Sbjct: 304 FGNQIRSYVFQPYTMVNDHRTELKITNVQGVMDGDLDPFIEAYLK 348


>gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1]
 gi|171276664|gb|EDT44325.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium dentium Bd1]
          Length = 380

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 16  EARAKYESISKALDVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQSQLKRLSS 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L+E  + ++ I+ +++  + ++LL GE D   A + +
Sbjct: 76  ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 315 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367


>gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 331

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 148/329 (44%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +  +P  W + I A+ + ++   L +       +Q+   +  + LE+   E+D S+ 
Sbjct: 1   MEHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEML--EEDDSVK 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +   +L+ +   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+ 
Sbjct: 59  DDLEASLETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTS
Sbjct: 119 NAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    
Sbjct: 179 FVSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTV 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +R+Q+ N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD
Sbjct: 239 DRTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RTN E      V+DGD++ F+ A L  +
Sbjct: 299 HRTNYEVAQVDKVMDGDIEGFIDAYLKWR 327


>gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 343

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 167/332 (50%), Positives = 228/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
           + +  +  DP+LW N   ++ +MRER+ L++A++  K++  R  D     +LA E +D  
Sbjct: 2   AEVEKEAADPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGED-- 59

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           I  +    + +++  VE  + E+LLSG++D   A + +H GAGGTESQDWA MLLRMY R
Sbjct: 60  ITADLRREMDQLRDIVEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLLRMYLR 119

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE++ F+T   +   GEEAG+KS T+ + G +AYG L  E GVHRLVRISP+D   RRH
Sbjct: 120 WAERQGFETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQAKRRH 179

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S++V P +D+SIE+ +   D R DTYR+ G GGQHVNTTDSAVRITH PTG+VV C
Sbjct: 180 TSFASVFVSPEIDESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTGIVVSC 239

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQHKN+ +A  +LR+K+YE EL+K+   +   E SK +I +G QIRSYVL PY+MV
Sbjct: 240 QNERSQHKNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDIDFGSQIRSYVLHPYRMV 299

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           KD RT  E   P  VLDGDL  F++A L +++
Sbjct: 300 KDHRTKFEVGDPDRVLDGDLKGFIRAYLLMRR 331


>gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 232/352 (65%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  ++ +     W   V RL  L+ +   P LW N + A  + RE   L   +  +K +
Sbjct: 64  IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 123

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV 
Sbjct: 124 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 183

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K
Sbjct: 184 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 243

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  ++I+ESD RI+ +RA GAGGQ
Sbjct: 244 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 303

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      
Sbjct: 304 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 363

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+I WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+ 
Sbjct: 364 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 415


>gi|78776561|ref|YP_392876.1| peptide chain release factor 2 [Sulfurimonas denitrificans DSM
           1251]
 gi|123550812|sp|Q30TP0|RF2_SULDN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78497101|gb|ABB43641.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 365

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 239/350 (68%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            LS++++ + G+ + D   +R++ ++        W +   A ++ +++   +  +     
Sbjct: 12  NLSKKMSNITGVVEPDKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNL 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ + D   L E+A EE+D  ++ E  +  Q I+  +   + E LLS E D N+A L +
Sbjct: 72  AKNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++LLRMY R+AE+R +  E L+   G+EAGIK  +LLI G NAYG+L
Sbjct: 132 HPGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN++RHTSFSS+ V P VDD I I I + D R+DTYR+SGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHI TGVVVQCQ +RSQHKN+A A  ML+++LYELEL    + A I   
Sbjct: 252 HVNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELEL--ENQKAEIAGI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K+EIGWG QIRSYV+QPYQ +KD R+NI  ++ S +LDGD+D  ++  L
Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVL 359


>gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
 gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
          Length = 356

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 148/342 (43%), Positives = 207/342 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  ++  Q  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L +++ +++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYDLEPDEDMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE R  K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV  PYQMVKDLRT  E      V+DGDL+ F++A L 
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLEPFIQALLR 344


>gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564]
 gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564]
          Length = 325

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQEELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  AQLAELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
 gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
          Length = 338

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 216/336 (64%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + + A+   +E   L        ++Q+   +  + LE+   
Sbjct: 1   MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E   +L ++   +   +   LLS   D ++A LE+H G+GGTE+QDWA+ML 
Sbjct: 59  DEDDSVKEELEASLIKLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|312796706|ref|YP_004029628.1| peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI
           454]
 gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia
           rhizoxinica HKI 454]
          Length = 320

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 166/317 (52%), Positives = 231/317 (72%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +  +A+ L RE++ LD  +  +  +   L D   L ELA EE D   L     ++Q +
Sbjct: 2   WSDSKQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERDVQAL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  V   +F  + +  AD N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ FK E L
Sbjct: 62  ERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEVL 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DGE AGIK+AT+ ++G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP V
Sbjct: 122 EQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D+SI+I+++ +D RIDT+RASGAGGQH+N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+
Sbjct: 182 DESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNRAE 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML+++LYE E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++ 
Sbjct: 242 AMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEISNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLDDF+ A+L 
Sbjct: 301 RAVLDGDLDDFISASLK 317


>gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
 gi|189040003|sp|A8M3R1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
          Length = 373

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 222/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D      + L      P LW +   A+ +  +  +++  I+ + ++
Sbjct: 13  LDTTLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEITKLTDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LLELA  E D  +L E +  +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRLDDTQVLLELAEAESDPGVLTEVAAEITGLAKSIDEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E++ R D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRTDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L+A+L  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLQGLK 310

Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               G WG Q+RSYVL PYQMVKDLRT  E  SPS V DG+LD F++A +  +K
Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGSPSSVFDGELDAFIEAGIRWRK 364


>gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
 gi|81666133|sp|Q7VIE6|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
          Length = 366

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 171/349 (48%), Positives = 234/349 (67%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + +  +  ++L  +    +D H W +   A  + ++++  +  +      
Sbjct: 13  LHNKCENIAKILNPTSLQKQLKDIENLEQDEHFWNDSKRAAEVAKQKRKCERMLQTYTNT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D L L E+A+ E+D   L+   +    +   ++  + E +LSGE D ++A + + 
Sbjct: 73  KQEIDDALELYEIAMSEEDSRTLELLFEQAPSLLSHIQKVEIEVMLSGENDGSNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RW+E+R FK E L+  DGEEAGIK    +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASILYRMYLRWSERRGFKVELLDYQDGEEAGIKGVAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P +DD I IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELDDDINIEIEDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELELQK +E A+     
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLKSKLYELELQKNQEGAS---QE 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKDLRT    +  S VLDGD+D+ +++ L
Sbjct: 310 KSEIGWGHQIRSYVLAPYQQVKDLRTQFATSDTSGVLDGDIDEIIESVL 358


>gi|225549713|ref|ZP_03770678.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
 gi|225369673|gb|EEG99121.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
          Length = 348

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+A  E D + L+        ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
 gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
          Length = 370

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 136/354 (38%), Positives = 213/354 (60%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L   +  +  + D +   +++  L  ++  P LW +   A+ +       +     ++ 
Sbjct: 11  NLRTTMASVREVLDLEKLKKQIVDLEEQSAAPDLWDDPDAAQKITSALSRANAENDRVEN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D  +L+E+  EE+D   L E    L++++  V   +  +LL+GE D  +A + +
Sbjct: 71  MDAAIDDLEVLVEMGTEENDADTLAEAERELKKLQKAVGELEVRTLLNGEFDEREAVVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KS T  +  P A+G L
Sbjct: 131 RAGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSVTFEVNVPYAFGNL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI E++ +ID +R+SG GGQ
Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIETTDTIEIPENELKIDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +++++L  L+ Q+ +        
Sbjct: 251 SVNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKKQEEDAQKKELAG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVL PYQMVKDLRT  E  + S V DGD+D F++A +  K+
Sbjct: 311 -DIKASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFIEAGIRWKR 363


>gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
 gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
          Length = 326

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 217/326 (66%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
                 WQ +  E   L +ER  L   I   +++  +  D  +L E+ALEE D + L E 
Sbjct: 1   MSKADFWQRDQEEISRLNQERSALSEQIDTWEDLFRKTEDAALLAEMALEEKDKTTLSEV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + +++R++ E++  +  SLL    D  +A + ++AGAGGTE+QDW  ML RMYTRWAE +
Sbjct: 61  TRDVERLEREIKRLELRSLLGKPDDRRNAIVAINAGAGGTEAQDWVEMLFRMYTRWAEAK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
             K E ++   G+EAGIK+    + GP AYG+LK E G+HR+VRISP+D+  RRHTSF+S
Sbjct: 121 GMKVEVIDFLAGDEAGIKNVDFTVTGPYAYGYLKSEHGIHRMVRISPFDATGRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD  I IE+ E+D RIDTYRASG GGQHVN T SA+RITH+PT +VVQCQ E+S
Sbjct: 181 VSVLPEVDLDINIEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTKIVVQCQNEKS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+NK  A  +L++KLYELE  K E+       ++ +I WG QIRSYV  PY+MVKD RT
Sbjct: 241 QHRNKDMAMKVLKSKLYELEKNKLEQKKQEIHDTQKDIAWGSQIRSYVFNPYRMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N++  +   V+DGD+D+F+ A L +K
Sbjct: 301 NLDDGNVDKVMDGDIDEFIDAYLRMK 326


>gi|189218067|ref|YP_001938709.1| protein chain release factor B [Methylacidiphilum infernorum V4]
 gi|189184925|gb|ACD82110.1| Protein chain release factor B [Methylacidiphilum infernorum V4]
          Length = 337

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 170/326 (52%), Positives = 216/326 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  WQ   +A+  +   + L    S  K + +R  D   L +L  E +D S+ +E  
Sbjct: 1   MASPSFWQTPEKAEKALSRSKELKAKFSDYKTLVNRFKDIEALYDLLQESEDPSLEKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +      ++  + + +LS   D  +A L VH+GAGGTE+ DWA MLLRMY R+AE+  
Sbjct: 61  QEINAYSDLLDSIEVKLVLSDPMDQKNAILSVHSGAGGTEACDWAAMLLRMYQRYAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   ++I  GEEAGIKSA+LLI G  AYG+LK E+GVHRLVRISP+++  +R TSF+S+
Sbjct: 121 FKVSLIDILPGEEAGIKSASLLISGSYAYGYLKAERGVHRLVRISPFNAQGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V   VD+SIEIEI ESD RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVVAEVDESIEIEIKESDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVVCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  +LR++LYELE  K+          K EIGWGRQIRSYVLQPY+MVKDLRT 
Sbjct: 241 IQNKATAMKILRSRLYELEKDKKRAEMERIYGQKGEIGWGRQIRSYVLQPYKMVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           + KT   +VLDGDLD F+ A L  KK
Sbjct: 301 VTKTQVEEVLDGDLDSFIWAYLLGKK 326


>gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102]
 gi|81573750|sp|Q7U3W6|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102]
          Length = 374

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 147/351 (41%), Positives = 207/351 (58%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L       D      R   L      P  W +   A+  MR    +   +  + +
Sbjct: 12  ELTDRLGHAQDCLDVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDEVKAQLQQLAD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               + D    LEL   E D  +L E  + L +++  ++  + E LLSG+ D   A L +
Sbjct: 72  WGGAVDDAKATLELYELEPDEEMLTEAQEGLNQLRQGLDRWELERLLSGDYDKEGAVLTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRWAE    K    E+ +GEEAGIKS T+ ++G  AYG+L
Sbjct: 132 NAGAGGTDAQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ I V P +D+ ++I+I E D  + T R+ GAGGQ
Sbjct: 192 RNEKGTHRLVRISPFNANDKRQTSFAGIEVMPKIDEEVDIDIPEKDLEVTTSRSGGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R         
Sbjct: 252 NVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E  WG QIR+YV  PYQMVKDLRT+ E      V+DG LD F+ A+L 
Sbjct: 312 DIVEAAWGNQIRNYVFHPYQMVKDLRTSEETNDVQAVMDGALDPFIDASLR 362


>gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
 gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
          Length = 322

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 223/309 (72%), Positives = 259/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K ++  L DN+ L+EL   E D S++++  D L+ +K +V   Q +
Sbjct: 1   MRERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNELQLQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR FK E LE HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGW+K E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEIE++E
Sbjct: 121 KSATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIEVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   + KT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDG LD 
Sbjct: 241 EQELKKREEAANAEAAGKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGALDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|301799772|emb|CBW32341.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
 gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
 gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
          Length = 325

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
 gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
          Length = 322

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 225/309 (72%), Positives = 262/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++IS IK ++  L DN+ L+EL   EDD S++ +  + L+ +K +V   Q  
Sbjct: 1   MRERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEALRGLKGKVNQLQLN 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLE+++GAGGTESQDWA+MLLRMY RWAEK  FK E LE HDGEEAGI
Sbjct: 61  SLLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSI+I+I+E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIDIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE A+   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDGDLD+
Sbjct: 241 EAELKKREEAASAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2]
 gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2]
          Length = 349

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 149/348 (42%), Positives = 211/348 (60%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L   FD      ++  L + T     W +   A+ L+R+   + + +   +++   L
Sbjct: 1   MRSLVSHFDLAEKKHKIQELTSMTLQDDFWNDPQHAQTLIRQLNGIKDIVESYEKLNSAL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                  +L  E+ D  I +        ++   +  + + LLS E D + A LE+H GAG
Sbjct: 61  IGLEETHDLLKEDYDDEIFELFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+ML RMY+RWAEK+ FK   L+   G+EAGIKS T L++G  AYG+LK E+G
Sbjct: 121 GTESCDWADMLYRMYSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS  RRHTSF+S+ V P  ++ IEIEI   D  ++T RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSGGRRHTSFASLDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+ H PTG+V  CQ  RSQH+N+ +A  +L+++LY+  ++++E      +  +   
Sbjct: 241 DSAVRMVHKPTGLVAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQKAN 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSYV  PY MVKD RT+ E +    V+DGDLD F+ A L  +
Sbjct: 301 EWGSQIRSYVFHPYSMVKDHRTSCETSDVQGVMDGDLDAFIFAYLKTQ 348


>gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
 gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
          Length = 322

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 222/309 (71%), Positives = 260/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K ++  L DN+ L+EL   EDD S++++  + L+ +K +V   Q +
Sbjct: 1   MRERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLD 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR +K E LE HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEI+++E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIDVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT ++ TSP DVLDG LD 
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDS 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|310778152|ref|YP_003966485.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
 gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
          Length = 365

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 228/351 (64%), Gaps = 1/351 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            ++  + G  D +    ++  L  +T     W +  E++ L++E   L   I   + I+ 
Sbjct: 15  EKIEEIRGSLDLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNALKEIIGEYRSIEK 74

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +LLE     +D   L+E     + +   +     + LL GE D+N+A + +H+G
Sbjct: 75  LSDEVSVLLEFVEMGED-EFLEELETKHRGLDKVIGAFDVKLLLDGEFDANNAIVTIHSG 133

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+ DWA+ML RMY+RW   R +K   L+   GE  GIKS T+L++G  AYG+LK E
Sbjct: 134 AGGTEACDWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKSITILVEGMRAYGYLKNE 193

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +G+HRLVRISP+D+N +RHTSF+S+ V P VD++ +IEI+  D +IDTYRASGAGGQHVN
Sbjct: 194 KGIHRLVRISPFDANKKRHTSFASVDVMPEVDETTDIEINTGDLKIDTYRASGAGGQHVN 253

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+P+GVVV CQ+ERSQ +N+  A  +LR+KL ELE++KREE     +  ++
Sbjct: 254 TTDSAVRITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLELEMKKREEELKKIQGEQS 313

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IGWG QIRSYV QPY +VKD RT +E  +   V+DGD+DDF+   L   K
Sbjct: 314 DIGWGSQIRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDFINGHLRWLK 364


>gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC
           53653]
          Length = 370

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  +L   +   +E+
Sbjct: 13  LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L  ++  V+  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAADEGDEDARAEAEAELNAVRKAVDEMEVRTLLSGEYDAREAVVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEIYETSYAEEAGIKSTTFAVQIPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ RID YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRIDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +N+A A N+L+AKL +   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLDRRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG+LD F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 364


>gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
 gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
          Length = 327

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 211/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++Q+   +  + LE+   ++D S+ +E  
Sbjct: 1   MSEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEML--DEDDSLQEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ASLEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG +D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGFIDGFIDAYLKWR 323


>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
 gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
          Length = 371

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 218/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   +R+  L  K  DP LW +   A+ +  +  H  + +  + ++
Sbjct: 12  LETTLQTVEKVIDLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRRVTDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL---QRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  E+   +     D      +++ E+E  + +++LSGE D+ DA +
Sbjct: 72  RQRLDDLPVLYELAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDARDALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAG+KSAT  IK   AYG
Sbjct: 132 NIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTDYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I++ E++ R+D YR+SG G
Sbjct: 192 TLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  + E      
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKR-QEERAQMDA 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +     WG Q+RSYVL PYQMVKDLRTN E  +PS VLDGDLD F++A +  +
Sbjct: 311 LKTTEGASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAGIRWR 365


>gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
 gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
          Length = 321

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 220/309 (71%), Positives = 253/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D + + E    ++ ++ E   +Q E
Sbjct: 1   MRERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMEASLAQR 309


>gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
 gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
          Length = 356

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 206/342 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +S +   +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +LQE  + L +++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYELEPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV QPYQMVKDLRTN E      V+DG LD F+ A+L 
Sbjct: 303 QIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDASLR 344


>gi|254429259|ref|ZP_05042966.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
 gi|196195428|gb|EDX90387.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
          Length = 356

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 233/353 (66%), Gaps = 8/353 (2%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG+FD+D   +RL+ +  + E+P +W +   A+ L +ER  L+  ++ I +    + 
Sbjct: 3   KRLGGIFDYDQKSERLTEVERELENPDVWNDPDYARALGKERAQLEMVVNTINDASQGVE 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   LL+L +EE D   L E   +L+ ++  V   +F  + SG+ D+  AYL++ AG+GG
Sbjct: 63  DTSALLDLVVEEGDEDTLTEVESDLRDLEKMVADLEFRRMFSGQMDACSAYLDIQAGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDW  M+LRMY RW E   FKTE +E   G+ AGIKSAT+  +G  AYGWL+ E GV
Sbjct: 123 TEAQDWGEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATIRFEGEYAYGWLRTETGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS  RRHTSFSS++V P VDD I+++I     R+DTYRASGAGGQHVN TD
Sbjct: 183 HRLVRKSPFDSGGRRHTSFSSVFVSPEVDDDIDVDIDVGSMRVDTYRASGAGGQHVNRTD 242

Query: 248 SAVRITHIPT-------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           SAVR+T+  T        +V QCQ  RSQH+NK QA  M++AK+YE+E+Q+R     + E
Sbjct: 243 SAVRLTYEYTDEGGEKHTLVTQCQSGRSQHQNKDQALKMMQAKVYEVEMQRRNAEKQVQE 302

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S+K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 303 SNKSDIGWGSQIRSYVLDD-GRIKDLRTGVESHNTQQVLDGALDQFIEASLKA 354


>gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 372

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 222/355 (62%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   ++ +  +   D   ++++ LN K   P LW +   A+ +     H  + +  I ++
Sbjct: 12  LRTTMDNIVAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQM 71

Query: 63  QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++E+A E+ D    IL E   +L++++ ++   +  +LL GE D  +A + 
Sbjct: 72  SERIDDLEAMVEMAAEDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L   + E+      
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|78356848|ref|YP_388297.1| peptide chain release factor 2 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219253|gb|ABB38602.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 358

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 228/354 (64%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M  S  L   GG FD   +  RL  +  +   P  W    +   ++RE+  L+N+++ + 
Sbjct: 1   MPFSSSLKRSGGAFDHAQSKYRLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSVARLD 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++    D    LELA EE+   +L++  +    ++  +E  +   LLS E D + A LE
Sbjct: 61  ALRQAKDDMQGWLELAEEENTQEVLEQLEEQAGILEALLEETEVGLLLSAEEDKHAAILE 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTE+QDWA MLLRMY RWAE  +FK E L+  DG+EAGIKS TL I G NAYG 
Sbjct: 121 IHPGAGGTEAQDWAEMLLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTLKIDGTNAYGL 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+G+HRL+RISPYD++ RRHTSF+S+ V P   + I I+I +SD RID +R+SG GG
Sbjct: 181 LKGEKGIHRLIRISPYDASGRRHTSFASVDVIPDAGEEITIDIKDSDLRIDIFRSSGPGG 240

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTT SAVR+THIPTG+  QCQ E+SQH NK  A  +LRA+LYE E+++R+       
Sbjct: 241 QSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRARLYEAEIRRRDAEKQADY 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +SK  IGWG QIR+Y LQPY++VKD R+N E      VLDG+LD  M+  L  +
Sbjct: 301 ASKEAIGWGSQIRTYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRNHLLYQ 354


>gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6]
 gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6]
          Length = 325

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  TQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232]
 gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394]
 gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180]
 gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429]
 gi|94990034|ref|YP_598134.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10270]
 gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096]
 gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750]
 gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
 gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS8232]
 gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes
           MGAS10394]
 gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS6180]
 gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus
           pyogenes MGAS9429]
 gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10270]
 gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS2096]
 gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10750]
 gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
          Length = 337

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+   
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 59  DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|226305794|ref|YP_002765754.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
 gi|259585230|sp|C0ZXD0|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
          Length = 368

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 153/352 (43%), Positives = 215/352 (61%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L     + D +   +R+  L  +  DP LW +   A+ +  +  H    +  I  +
Sbjct: 12  LDTTLRTCESVVDVEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++RL +  IL ELA +E     + +       ++ ++   + +++LSGE D  DA + + 
Sbjct: 72  RERLDEMPILYELAEDEG-PDAVADADAERASLRDDIAAMEVKTMLSGEYDERDALINIR 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAG+KSAT  IKGP  YG L 
Sbjct: 131 SGAGGIDAADWAEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLS 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI+E+D R+D YR+SG GGQ 
Sbjct: 191 VEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEINENDIRVDVYRSSGPGGQS 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  ++ Q+     +  +  
Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLAVKRQEERAEMDALKGD 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 311 SGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGIRWR 361


>gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542]
 gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter
           keddieii DSM 10542]
          Length = 372

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 145/356 (40%), Positives = 222/356 (62%), Gaps = 4/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R++ L+ +   P LW +   A+ +          +  I  +
Sbjct: 13  LRGTLATISAVTDPEALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNM 72

Query: 63  QDRLCDNLILLELALE---EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L+E+A E    DD   L+E   +L  I+ ++   +  +LLSGE D+ +A +
Sbjct: 73  ESRIDDLEVLVEMATEGDGADDVETLEEAQKDLDGIRRDLGDLEVRTLLSGEWDAREAVV 132

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGG ++ D+A ML+RMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G
Sbjct: 133 SIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFG 192

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  ++I +++ R+D +R+SG G
Sbjct: 193 NLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHVDIPDNEIRVDVFRSSGPG 252

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  LE Q +E+     
Sbjct: 253 GQSVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAQEKAMKKE 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   +  WG Q+RSYVLQPYQMVKDLRT  E  + S V DG++DDF++A +  ++
Sbjct: 312 MAGDVKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGIRWRR 367


>gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
 gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
          Length = 325

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++ +   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMDELQDEVEILLDFLAE--DESVKDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLSELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 327

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+ + ++   L +       +Q+   +  + LE+   E+D S+  +  
Sbjct: 1   MTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEML--EEDDSVKDDLE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ +   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ASLETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD++ F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323


>gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
 gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
          Length = 320

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 176/318 (55%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I ++   L D   LLELA+E DD     E    L+++
Sbjct: 2   WNEPERAQALGKERSSLEAIVETIDQMTQGLEDVEGLLELAVEADDEDTFNEAEAELEQL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +
Sbjct: 62  EGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP V
Sbjct: 122 EESDGDVAGLKSATVKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q
Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   L+AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDKFIEASLKA 318


>gi|239941657|ref|ZP_04693594.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           11379]
          Length = 352

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 153/349 (43%), Positives = 213/349 (61%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + ++ R+
Sbjct: 1   MGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  E D     E    L+ +K  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +      
Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGDGGN- 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 348


>gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM
           43017]
 gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora
           viridis DSM 43017]
          Length = 368

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 223/353 (63%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  +  + D D   + ++ L  +   P LW +   A+ +  +  H   ++  + E+
Sbjct: 12  LGGKLAQVEAVMDLDALRREVAELEEEAARPDLWNDPEVAQRVTSQLSHKQASLRKVSEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  E D + L E    L ++  +V   +  +LLSGE D  +A + + 
Sbjct: 72  RQRVDDLGVLHELAEAEGDKASLAEAEAELAQLTKDVNALEVRTLLSGEYDERNAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ DWA MLLRMY RWAE+  + TE  +I   EEAGI+SAT  I GP  YG L 
Sbjct: 132 SEAGGVDAADWAEMLLRMYLRWAERHNYPTEIYDISYAEEAGIRSATFKISGPYLYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V P V++   +EI E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFAHVEVLPEVEEIDHVEIPEKDIRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L+AKL  L+ +K EE A +    
Sbjct: 252 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQAKL--LQRKKEEERAELDALR 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQ+VKDLRT+ E  +PS VLDG+LD F++A +  +K
Sbjct: 310 DSGSSWGNQMRSYVLHPYQLVKDLRTDYEVGNPSAVLDGELDGFLEAGIRWRK 362


>gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321]
 gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321]
          Length = 325

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
 gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
          Length = 325

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 342

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 230/336 (68%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    K   P  W +  +A+ ++ E   + +++     +Q+   +  ++ ELA E
Sbjct: 2   KQEMIANYEEKMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYDELEMMAELAEE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S+  E +D+++++  ++E  + + LL+   D  +A LE+H GAGGTESQDW  MLL
Sbjct: 62  EGDESLAAEVADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D+
Sbjct: 122 RMYTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDA 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S  V P + D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITHIPTG
Sbjct: 182 SGRRHTSFVSCDVVPEISDDVEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ +A  MLR+KLYE ++++++   +     +++I WG QIRSYV  
Sbjct: 242 IVVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQSDIAWGSQIRSYVFH 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN+E  +   V+DGDLD F+   L  +
Sbjct: 302 PYSMVKDHRTNVETGNVGAVMDGDLDAFIDGYLRSQ 337


>gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4]
 gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           uraniireducens Rf4]
          Length = 317

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 161/308 (52%), Positives = 223/308 (72%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++ER  ++  +S       ++ D  +L+EL  E +D + L E       ++  V + +F
Sbjct: 1   MLKERTVMEKTLSAWDRFNRQVDDIRVLIELGSEAEDEATLAEVHGLNDELEKGVSHAEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + +LSG  D++  ++ +++GAGGTESQDWA MLLRMY R+ E++ +KTE  +   G+EAG
Sbjct: 61  QKMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGDEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +K  T  + G   YG+LK E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IE++++
Sbjct: 121 VKGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEVKVN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D R+DT+R+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQH NKA A  +LRAKL
Sbjct: 181 EADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE ELQ+RE  A      K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDGDL+
Sbjct: 241 YERELQERESQAAEIGGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGDLE 300

Query: 345 DFMKATLA 352
           +F+ A L 
Sbjct: 301 EFIVAFLM 308


>gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 327

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +++   +  + +E+   E+D S+  E  
Sbjct: 1   MTEPDFWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETELYMEML--EEDESVKGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E  K+ E  N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
          Length = 340

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 158/330 (47%), Positives = 222/330 (67%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +  L  K   P  W++  +AK + ++   L + +  +K++     +    L L  E+ + 
Sbjct: 2   IMELEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDEDFNA 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L E    L RI+  +E  + E  L+ + D NDA L +H+GAGGTESQDWA MLLRMY 
Sbjct: 62  ELLAEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRMYA 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            WAEK  +  + ++   GEEAG+KS ++ IKG  AYG LK E GVHRLVRISP+++  +R
Sbjct: 122 HWAEKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQGKR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TSF+S++VYP  D+ +EIEI+  D +IDT+RASGAGGQ+VNTTDSAVRITH+PT + V 
Sbjct: 182 QTSFASVFVYPEFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ +N+ +A ++L+++LY+   ++RE+     E+SKTEIGWG QIRSYV  PYQM
Sbjct: 242 CQNERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KD RTN E  +   V++GDL+DF+ A L 
Sbjct: 302 IKDHRTNYETGNVDKVMNGDLNDFIYAWLK 331


>gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
 gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
          Length = 322

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 247/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L+  +  I ++   L D L L+EL  E  D    +E  + L+ +  + + +Q E
Sbjct: 1   MRERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDAQRRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGEAD ND ++E+H+GAGGTESQDWA ML RMY RWAE++KFK E +E   GEEAGI
Sbjct: 61  ALFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TLL+KG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD IE+ I+E
Sbjct: 121 KSGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDRIEVNINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSA+RITHIPTG+VV CQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KRE  AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +   +PS+VLDG+LDD
Sbjct: 241 ELELEKREAEANKAAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPSEVLDGELDD 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMQASLAQR 309


>gi|54026461|ref|YP_120703.1| peptide chain release factor 2 [Nocardia farcinica IFM 10152]
 gi|76363350|sp|Q5YR52|RF2_NOCFA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54017969|dbj|BAD59339.1| putative peptide chain release factor 2 [Nocardia farcinica IFM
           10152]
          Length = 372

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 154/356 (43%), Positives = 222/356 (62%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H    +  +++
Sbjct: 11  ELDATLKTVESVLDIEELRRRIDELEHQAADPDLWNDQDHAQRVTSELSHAQGELRRVED 70

Query: 62  IQDRLCDNLILLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ RL D  +L ELA  E+     + L+E       +  +VE  +  +LLSGE D  +A 
Sbjct: 71  LRRRLEDLPVLYELAEGEEGEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREAL 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ DWA ML+RMY RWA++  +  E  +    EEAGIKSAT  +K P AY
Sbjct: 131 VNIRSGAGGVDAADWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ E++ R+D YR+SG 
Sbjct: 191 GTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETEIRVDVYRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +NK  A  +L+AKL E + Q+     + 
Sbjct: 251 GGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRQEERAEMDA 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++++    WG Q+RSYVL PYQMVKDLRTN E  +PS VL+GD+D F+++ +  +
Sbjct: 311 LKTNEGA-SWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLNGDIDGFIESGIRWR 365


>gi|51473471|ref|YP_067228.1| peptide chain release factor 2 [Rickettsia typhi str. Wilmington]
 gi|51459783|gb|AAU03746.1| peptide chain release factor 2 (RF-2) [Rickettsia typhi str.
           Wilmington]
          Length = 340

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 173/332 (52%), Positives = 236/332 (71%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ L   T DP LW N   A++L+RE+ +++  ++    ++    D L L  +A  E+D
Sbjct: 2   RLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEAMAEVEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L +   + +++ +     + E L S E+D N+ +LE++AGAGGTES DWA++++RMY
Sbjct: 62  FETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDWASIMMRMY 121

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW K E GVHRLVRISP+++  +
Sbjct: 122 LRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 181

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPT  V 
Sbjct: 182 RMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTNTVT 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR +  +   ++KT+  WG QIRSYVLQPYQ
Sbjct: 242 QCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIRSYVLQPYQ 301

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +VKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 302 IVKDLRTDYETSDTKGVLDGNLENFVSASLAM 333


>gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [NC10 bacterium 'Dutch
           sediment']
          Length = 334

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 162/319 (50%), Positives = 223/319 (69%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ +M+E++ L + +  +  I   L D  +LL L  EE+D   L+E   +L+
Sbjct: 6   EFWADTSRAREIMKEQRALKDVVDQLVAIGGELDDLAVLLGLLREEEDPQALKELESSLR 65

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            ++ ++   +  + ++ E DS +A L ++ GAGGTESQDWA MLLRMY RWAE   +KTE
Sbjct: 66  SLEGQIGALELTTFMAEEYDSGNAILSINPGAGGTESQDWAQMLLRMYLRWAETGSYKTE 125

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +++   EEAGIKSAT+ + G  AYG LK E GVHRLVRISP+D+N RRHTSF+S++VYP
Sbjct: 126 IIDLLPAEEAGIKSATVTVSGKYAYGRLKAEIGVHRLVRISPFDANHRRHTSFASVFVYP 185

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D++I++ I + D RIDTYR+SGAGGQHVN TDSAVRITH+PT +VV CQ ERSQHKNK
Sbjct: 186 EIDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNIVVSCQNERSQHKNK 245

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           A A  +LRA+LY+   +++E+     E  K +I WG QIRSYVL PYQ+VKD RT +E +
Sbjct: 246 AMAMKVLRARLYDHYRREQEKEMAKLEGEKKDIAWGSQIRSYVLAPYQLVKDHRTGLETS 305

Query: 334 SPSDVLDGDLDDFMKATLA 352
           +   VLDG+++ F+ A L 
Sbjct: 306 NVDKVLDGEIEPFIDAFLM 324


>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
          Length = 369

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 227/354 (64%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L+ +G   + +     +  +  +T + + W +  +A+ +M +     +       
Sbjct: 13  ELDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTS 72

Query: 62  IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++ L D   LL++  E  +D   L E  + L  +K E+   + ++ L GE D N+AYL 
Sbjct: 73  FKEELKDQSDLLDIIEESNEDLESLNEIEEILNSLKKEIGSFKIKTELDGEYDKNNAYLV 132

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGG E+ DWA ML+RMYTR+ EKR FK +  ++++ E  GIKSAT+ +KG  AYG+
Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFAYGY 192

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+GVHRLVRISP+DS+ RRHTSF+S+ ++P ++D + +EI   D RIDTYRASGAGG
Sbjct: 193 LKGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL +++ ++  E     +
Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+   LA K
Sbjct: 313 GNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLANK 366


>gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
 gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
          Length = 338

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 152/327 (46%), Positives = 212/327 (64%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +  DP  W +   AK + +E   L   +    ++ +   D   L +LA E++D S   E 
Sbjct: 2   RMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGEI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                R+  E+E ++   LLSGE DS +A +  HAGAGGTE+QDW  M++RMY+RWAE+ 
Sbjct: 62  ERQYYRLVKELEKREVLLLLSGEYDSCNAIMAFHAGAGGTEAQDWTQMIVRMYSRWAEQH 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +    ++   G+EAG KS    ++G NAYG+LK E+GVHRLVRISP+D+N RRHTSF++
Sbjct: 122 GYTIRMIDYQPGDEAGTKSCAFTVEGENAYGYLKSEKGVHRLVRISPFDTNGRRHTSFTA 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P + D  E+EI+  D R+D +RASGAGGQHVN T SAVR+THIPTG+VVQCQ ERS
Sbjct: 182 VDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+      LRAKL+ELE +K+E++      ++  I WG QIRSYV  PY +VKD RT
Sbjct: 242 QIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQQSIEWGSQIRSYVFHPYNLVKDHRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +E ++   V+DG++D F++  L   K
Sbjct: 302 GVETSNIQSVMDGNIDMFIEGYLQFLK 328


>gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597]
 gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597]
          Length = 325

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 211/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDFLAE--DESVHEELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
 gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
          Length = 338

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 172/332 (51%), Positives = 227/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL+LA +E D  
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLA-DESDSE 60

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            L      L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY R
Sbjct: 61  FLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120

Query: 144 WAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WA     F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRR
Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ
Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ  RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+M
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKDLRT  E      VLDGDLD F+ A L  K
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|313672869|ref|YP_004050980.1| bacterial peptide chain release factor 2 (brf-2) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 371

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 186/352 (52%), Positives = 251/352 (71%), Gaps = 3/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +      + + ++  ++LS +  +T DP  W    E+K L++E+  +   +     +
Sbjct: 13  LKEKFKRFKNIVNEEHLKEKLSNIEKQTHDPDFWS-SKESKHLLKEQSSIKKFLDDWYYL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R  D  +LLEL  +E+  ++  E  +N   +K  V   + + +L+GE D N+A L +H
Sbjct: 72  VRRFEDMDVLLEL--QEEGENVAAEIEENFTELKQIVNDFELKLILNGENDINNAILTIH 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANMLLRMY RWAE RKFK E L+   G+EAGIKSATL I GP AYG+LK
Sbjct: 130 SGAGGTEANDWANMLLRMYIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLK 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SP+D+N++RHTSF+S++V P ++D ++I I+ESD +IDT+RA GAGGQH
Sbjct: 190 GETGVHRLVRLSPFDANNKRHTSFASVFVLPEIEDDVDIVINESDLKIDTFRAGGAGGQH 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A  +L++KLYELE++K+ +  N  ESS
Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KTEI +G QIRSYVL PY+MVKDLRT  E  +P  VLDG+LDDF+++ L  K
Sbjct: 310 KTEINFGSQIRSYVLHPYKMVKDLRTRHETGNPDAVLDGELDDFIRSYLFYK 361


>gi|329946372|ref|ZP_08293939.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328527348|gb|EGF54346.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 373

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 147/357 (41%), Positives = 218/357 (61%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE   D   IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGDDAAEILAEAESDLTAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+ ++  + L     EEAG+KS T  +  P AY
Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+  + E+    
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSYVL PYQMVKDLRT+ E  +P  V DGD+D F+ A +  +K
Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTSFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101]
          Length = 356

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 143/341 (41%), Positives = 210/341 (61%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +  +A+  MR+   +   +  + + Q  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +E+   E D  +L E+++ LQ+++ +++  + E LLSG  D   A + ++AGAGGT++
Sbjct: 63  ATVEIYGLEPDEELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I + D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRT  E T    V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
 gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
          Length = 380

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 16  EARAKYESISKALDVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQSQLKRLAS 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L+E  + ++ I+ +++  + ++LL GE D   A + +
Sbjct: 76  ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 315 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367


>gi|270157123|ref|ZP_06185780.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|289164472|ref|YP_003454610.1| peptide chain release factor 2 [Legionella longbeachae NSW150]
 gi|269989148|gb|EEZ95402.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|288857645|emb|CBJ11485.1| putative peptide chain release factor 2 [Legionella longbeachae
           NSW150]
          Length = 336

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 170/330 (51%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E   +W N   A+ L RE+  L+  +S + ++   + D   L E+A EE D  
Sbjct: 2   EEVVRELESSTIWDNPEVAQALGREQTQLEALVSTLTQLGQSITDLNELFEMAREESDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + E S+ LQ ++ +V   +F  + SG+ D ++AYL++ +G+GGTE+QDWA MLLRMY R
Sbjct: 62  TINEISEELQTVEKKVADLEFRRMFSGKMDDSNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E+  F TE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQH+NK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QTDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330


>gi|313679114|ref|YP_004056853.1| bacterial peptide chain release factor 2 (brf-2) [Oceanithermus
           profundus DSM 14977]
 gi|313151829|gb|ADR35680.1| bacterial peptide chain release factor 2 (bRF-2) [Oceanithermus
           profundus DSM 14977]
          Length = 370

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 216/353 (61%), Gaps = 5/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L+ LGG+FD      RL  L  +     LW +   A+ L +E   L   +   ++
Sbjct: 5   ELKQKLDALGGIFDIAGKKARLEELEKELGQEGLWDDPAAAQKLTQEAARLKKVVEEYEQ 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L   + L + A  E+  S+  E  +  +++    E    ++LL  E    +A L +
Sbjct: 65  LSGDLESLIELWDEASPEERESLEPELEEAAKKL----EDLYHQTLLGFEHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTRWAE+  FK E +++  G EAGI SA L+++G NAYG L
Sbjct: 121 KPGAGGTEAMDWAEMLLRMYTRWAERHGFKVELVDVTPGPEAGIDSAELIVRGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E+GVHRLVR SP+DS  RRHTSF+S+ V P VDD++EIEI   D RID +RA G GGQ
Sbjct: 181 SAERGVHRLVRPSPFDSTGRRHTSFASVEVSPEVDDTVEIEIKPEDLRIDVFRAQGHGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRI H+PTG++V  Q  RSQHKNK  A  +L+++L+E E QKR+E       
Sbjct: 241 GVNTTDSAVRIVHLPTGIIVTSQATRSQHKNKELAMKVLKSRLFEREWQKRQEEMAKLRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  I WG QIRSYVL   Q VKD RT + +  P  VLDGDLDD + A L  +
Sbjct: 301 EQKAIEWGSQIRSYVL-DKQYVKDHRTGLMRHDPDKVLDGDLDDLIWAGLEWR 352


>gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992816|gb|EEC58817.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
          Length = 333

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + L ++     E++  + D   L+ +A EE+D S++ E  
Sbjct: 1   MEAPGFWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMADEENDESLVPEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +     + + +  +  +LLSGE D ++A L +HAGAGGTE+ DW  ML+RMYTRWAE + 
Sbjct: 61  EEFNVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +KTE ++  +G+EAG+K+ T+ I+G NAYG+L+ E G+HRLVRISP+++  +R TSF S 
Sbjct: 121 YKTEVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+NK +A  ML+AKLY L+ Q+  E  +       ++ +G QIRSYVLQPY MVKD RTN
Sbjct: 241 HQNKDKAMQMLKAKLYLLKKQENAEKTSDIRGDVKDVNFGSQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   VLDG++D F+ A L  +
Sbjct: 301 EEVGNAQSVLDGNIDPFITAYLKWQ 325


>gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
 gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
          Length = 326

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 158/323 (48%), Positives = 225/323 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W +  +A+ +  E + L + +   KE++ ++ D   L +LA+EE+D S  ++  
Sbjct: 1   MQEPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDII 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ I  E E  + E LLSGE D N+A +++H G GGT++QDW  MLLRMYTRWAEK+ 
Sbjct: 61  REVEEIDNETERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++I   E+AGIKSATL I G  AYG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 121 FKIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + ++ +I+I   D ++DTYR+SGAGGQHVN T+SA+RITHIPTG+VVQCQ +RSQ
Sbjct: 181 EVLPELTNNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQNQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+ +A  ML+AKL EL+ +  +E          ++GWG QIRSYV QPY MVKD RT+
Sbjct: 241 HHNREEAMRMLKAKLAELKERAHKEKIEDLTGELKDMGWGSQIRSYVFQPYTMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           +E  + + V+DGD+D F+   L 
Sbjct: 301 VECGNINAVMDGDIDQFINEYLK 323


>gi|325963891|ref|YP_004241797.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 371

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 142/352 (40%), Positives = 219/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D +   + ++ L+ +  +P LW +   A+ +     H  + +  +  +
Sbjct: 13  LRATYESIERVSDVEALKEDIAELSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +EDD + + E +  L+ IK  ++  +  +LLSGE D  +A + + 
Sbjct: 73  ASRIDDLEVLVELGQDEDDAASMGEAAAELESIKKALKELEVVTLLSGEYDEREAVVSIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T  ++    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI +++ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +L+++L  L+  ++E+      + 
Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKK-EQEDAEKKALAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF+ A +  +
Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363


>gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
          Length = 325

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 150/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63255265|gb|AAY36361.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 329

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 175/327 (53%), Positives = 236/327 (72%), Gaps = 1/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +N + EDP++W N   A+ L RER  L   +  + E+   L D   LL ++ EE+D + +
Sbjct: 1   MNRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEEDQAAV 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            + +  ++R++  +E  +F  + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA
Sbjct: 61  DDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTS
Sbjct: 121 DKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS+++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ 
Sbjct: 181 FSAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++IGWG QIRSYVL     +KD
Sbjct: 241 ERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRSYVL-DASRIKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRTNIE++    VLDGD+D+++ A+L 
Sbjct: 300 LRTNIERSDCDKVLDGDIDEYLIASLK 326


>gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
 gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
          Length = 325

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 376

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW N   A+ +  +   + + +  +  
Sbjct: 12  EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQSQLKRLAS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L E    ++ I+ ++   + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGQEEEDADTLAEAQSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363


>gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
          Length = 325

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200]
          Length = 325

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 325

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 150/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
 gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
          Length = 325

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L +  +   ++ +   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKHTYNTFHKMDELQDEVEILLDFLAE--DESVKDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLDELAQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440]
 gi|189040004|sp|A4X3K6|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora
           tropica CNB-440]
          Length = 373

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 220/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D      + L      P LW +   A+ +  +  +++  I+ + E+
Sbjct: 13  LDATLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEINKLAEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LLELA  E D   L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRLDDAKVLLELAEAESDPGALTEVEAEVAGLAKAIDEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E++ R D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRFDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L+A+L  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLQGLK 310

Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               G WG Q+RSYVL PYQMVKDLRT  E  +P+ V DG+LD F++A +  +K
Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGTPAAVFDGELDAFIEAGIRWRK 364


>gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 327

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +++   +  + +E+   E+D S+  E  
Sbjct: 1   MTEPDFWNDTISAQKTSQELNELKVKFDTFHNMENLSEETELYMEML--EEDESVKGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFQGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16]
          Length = 361

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 164/346 (47%), Positives = 227/346 (65%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD +   + L+ L+ +      W +   A+ + +E + L +     +E++ RL D 
Sbjct: 14  FGGIFDIETRQKTLASLDEEMASNEFWNDRQRAEQVTKEARTLRDLTQPWQELKGRLDDL 73

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLEL+ +EDD   L++    L  +   +   +F S+LS E D  DA L +H+GAGGTE
Sbjct: 74  AELLELSADEDDADTLKDLQIELSDVDETLGELEFFSMLSDEDDPKDALLVIHSGAGGTE 133

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA ML+RMY RW E+R F +E +++  G+EAGIK AT+ +KG  AYG+LK E GVHR
Sbjct: 134 AADWAEMLMRMYGRWIERRGFTSEIMDLQPGDEAGIKGATIEVKGSYAYGYLKAEAGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+D+N RRHTSF+S++VYP VD   ++E+ + D +IDTY+A GAGGQHVN T SA
Sbjct: 194 LVRISPFDANKRRHTSFASVFVYPDVDSIPDVELRDEDLQIDTYKAGGAGGQHVNKTSSA 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ ERSQ KNK  A  +L A+LY+   Q+  +     ES+K  I +G
Sbjct: 254 VRITHLPTGIVVNCQNERSQLKNKGTAMKVLTARLYDHYKQEEMKKMEAVESTKKAIDFG 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            QIRSYV QPY +VKD RT  E  +   ++DGDLD F+ A L+  +
Sbjct: 314 SQIRSYVFQPYTLVKDHRTGHESGNVQAIMDGDLDGFINAFLSAAQ 359


>gi|328955235|ref|YP_004372568.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
 gi|328455559|gb|AEB06753.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
          Length = 383

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 209/355 (58%), Gaps = 5/355 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +L  +      D   +R+  L  ++  P  W +   A+ +M E     + +S ++  +
Sbjct: 17  AARLCEVESYLHLDEKRERIVELEQRSARPDFWDDGERARAVMEELSCARDDVSGVERAR 76

Query: 64  DRLCDNLILLELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            RL D +  L+LA E    ++   +  E +     +  E++  +  S  +GE D   A +
Sbjct: 77  TRLADAVAALQLASELEHGDEADELAAEATAAASELTREIDQMELSSWFTGEFDHGSAII 136

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +  G GG E+QDW  ML +MY ++ E+R +K    +    +  GI  AT  ++G +A+G
Sbjct: 137 TIKPGQGGLEAQDWTFMLFKMYMKYCERRGWKVTVNDCPPADVIGIDRATFTVEGKDAFG 196

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVRISP D   RR T+F+ + V PV+ D I++EI  +D R+D Y ASG G
Sbjct: 197 MLRAEAGVHRLVRISPTDDKKRRQTTFAGVEVIPVLPDDIDVEIDPTDIRVDVYHASGPG 256

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA    +L+++L+ELEL+KREE  +  
Sbjct: 257 GQGVNTTDSAVRVTHLPTGIVVTCQNERSQIQNKAACMQILKSRLFELELEKREEALDEI 316

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
              K  IG+G QIRSYVL PYQMVKDLR+ +E  + + VL DGDLD F+      
Sbjct: 317 RGPKHTIGFGNQIRSYVLYPYQMVKDLRSGVETGNVASVLEDGDLDPFIIGYHRW 371


>gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
 gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
          Length = 325

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +  +++++   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  + + +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLTELDMMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|254497462|ref|ZP_05110255.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
 gi|254353277|gb|EET12019.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
          Length = 335

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 171/330 (51%), Positives = 226/330 (68%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E   +W N   A+ L RER  L+N +  +  +   + D   L ELA EE+D  
Sbjct: 2   EEVVRELESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + E    L+ I+ +V   +F  + SG  D  +AYL++ +G+GGTE+QDWA MLLRMY R
Sbjct: 62  AINEIGAELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E+  F TE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+++++ P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC
Sbjct: 182 TSFAAVFISPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQH+NK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330


>gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219]
 gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219]
          Length = 346

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 140/345 (40%), Positives = 209/345 (60%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +   FD D   Q +   N        W +  +A+ +++E   L + +    ++ +   D 
Sbjct: 1   MATRFDLDQKKQEIQKNNDLMAQEDFWNDQKKAQKIIKENNSLKDLVDQHTKLYETTLDL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  +       D  + +   +   +   +    +   LLSG  D ++A LE+H GAGGTE
Sbjct: 61  LASVTELQSSLDEDMKELVEEEYVQYDQDYALFEVRVLLSGPYDDHNAILEIHPGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA ML RMYTR+AE++ +  + L+   GEEAG+KS ++ + G  AYG+LK E GVHR
Sbjct: 121 AMDWAGMLYRMYTRFAERKGYHLDVLDYQPGEEAGVKSVSMRVSGNMAYGYLKAENGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DSN+RRHTSF+S+ + P  +D +EIEI + D  + T R+SGAGGQH+N TDSA
Sbjct: 181 LVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIEDKDLDVITMRSSGAGGQHINKTDSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+ V  Q +RSQ +N+    NML++KL +L+++++E+ A+  +       WG
Sbjct: 241 VRMTHKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIREQEQRASEIKGEVKANEWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV  PY MVKDLRT  E  +   V+DGD++ F+ + L  +
Sbjct: 301 SQIRSYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYLRSQ 345


>gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
 gi|158433669|gb|EDP11958.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
          Length = 346

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 146/341 (42%), Positives = 209/341 (61%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
             FD      ++  L  +T +   W +   A+ L+++   L + +   +++   L     
Sbjct: 2   SRFDLAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGMEE 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L L  ++ D  I +        ++   E  + + LLS E D ++A LE+H GAGGTES 
Sbjct: 62  TLTLLKDDFDTEIFELLEMEYHEMEERFEQFELKMLLSHEYDHSNAILELHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY+RWAEK+ +K   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS  RRHTSF+S+ V P  +D IEIEI   D  ++T RASGAGGQH+N TDSA+R
Sbjct: 182 RISPFDSGGRRHTSFASLDVMPQFNDEIEIEIRPEDLIVETKRASGAGGQHINKTDSAIR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG+V  CQ  RSQH+N+ +A  +L++++Y+  ++++E      +  +    WG Q
Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANEWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYV  PY MVKD RT  E +    V+DG+LD F+ A L 
Sbjct: 302 IRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYLK 342


>gi|239981919|ref|ZP_04704443.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 355

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 154/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + ++ RL
Sbjct: 1   MESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  EDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +      
Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 348


>gi|119952877|ref|YP_945086.1| peptide chain release factor 2 [Borrelia turicatae 91E135]
 gi|119861648|gb|AAX17416.1| bacterial peptide chain release factor 2 [Borrelia turicatae
           91E135]
          Length = 353

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 226/354 (63%), Gaps = 4/354 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M    +L   GG FD +    +L     +  D + W +  +A+ +++ +  L   I   +
Sbjct: 1   MNFWNKLKMSGGSFDSNKIKVKLKEYEKQINDENFWNDNKKAQEILKNQNILKAKIEPWE 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++  +L D   L E+A  E+D ++L +   ++ +++ + ++    S    + D N+A+L 
Sbjct: 61  DLICKLKDLRELCEIAESEEDTALLDQ---DINKLREQYKHLLTLSYFKEDIDINNAFLT 117

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H+GAGGTE+ DW +ML R+Y R++E+  +KTE +++ + E  GIKS T+ IKG  AYG+
Sbjct: 118 IHSGAGGTEACDWVSMLYRIYLRYSERHGYKTELIDLLEAE-GGIKSVTIEIKGEYAYGF 176

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E G+HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGG
Sbjct: 177 LKSEVGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEITIKPEDIRVDTYRASGAGG 236

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +
Sbjct: 237 QHVNKTSSAVRITHLQTGIVTQSQTDRSQHRNKDLAMRVLKSKLYEHYKILEQQKSKSKQ 296

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K +I WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 297 EEKKDISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350


>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
 gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
 gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
 gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
          Length = 377

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 164/358 (45%), Positives = 223/358 (62%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  K+ DP LW +   A+ +  E   + + +  +K +
Sbjct: 12  LDGTLTTIEKVLDLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGL 71

Query: 63  QDRLCDNLILLELALEE--DDCSILQETSD----NLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L ++A EE  DD    QE         + ++ E+E  +  ++LSGE D  +
Sbjct: 72  RQRLDDLPVLYDMAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A L + + AGG ++ DWA MLLRMYTRWAEK   K E  +I   EEAGIKSAT++I G  
Sbjct: 132 AVLNIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEY 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+S
Sbjct: 192 MYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIDENDVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+ +   
Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAEM 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  +       WG Q+R+YVL PYQMVKDLRTN+E   PS VLDGDLD F++A +  +
Sbjct: 312 DALKGDG-SNSWGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGIRWR 368


>gi|95929408|ref|ZP_01312151.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134524|gb|EAT16180.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
          Length = 312

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 159/307 (51%), Positives = 220/307 (71%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++ER  L   +         + D  +L+EL  E +D +   E  + L  ++ +V+  +F
Sbjct: 1   MLKERTALQKLVDGWTSAAQTVEDLEVLVELGAESEDEATRDEVRELLPELERQVDKMEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             +LSGE DS++A L ++AGAGGTE+QDWA+MLLRMY R+ + + FKT+  +   G++AG
Sbjct: 61  ARMLSGEHDSSNAILSINAGAGGTEAQDWADMLLRMYLRFCDIKGFKTKITDYQPGDDAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KS T  ++G  AYGWL+ E G+HRLVRISP+D+ S+RHTSF S++V+P +DDSIE+E+ 
Sbjct: 121 VKSVTFTVEGDYAYGWLRPEMGIHRLVRISPFDAASKRHTSFCSVFVFPELDDSIEVELL 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D +IDT+RASGAGGQH+N TDSA+RITHIP+G+VV CQ +RSQH NKA+A   L+A+L
Sbjct: 181 DKDMKIDTFRASGAGGQHINKTDSAIRITHIPSGIVVACQDQRSQHNNKAEAIRQLKARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE QK+EE AN     K EIGWG QIRSYVL PY+MVKD RT  E  +   VLDG ++
Sbjct: 241 YELERQKKEEEANALSGDKKEIGWGSQIRSYVLHPYRMVKDHRTGFEVGNADSVLDGHIE 300

Query: 345 DFMKATL 351
            F++A L
Sbjct: 301 GFIEAYL 307


>gi|154175392|ref|YP_001408592.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
 gi|112803979|gb|EAU01323.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
          Length = 372

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 233/354 (65%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  +G +    +  +RL  +     +P  WQ++ +A  L +E+  + N ++    
Sbjct: 16  RLNTKVENIGSIIKPQSIKERLQEIERLEHEPDFWQDIAKAGALNKEKTKISNMLAKFTN 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D   L ELA  E D   L    D+   ++ ++   +   LLSGE D+ +A + +
Sbjct: 76  AKAAVDDAKELYELANSESDEETLNSLFDDATELENKITALEISMLLSGEDDNKNAIISI 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + ++KG NAYG+L
Sbjct: 136 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D +IDTYRASGAGGQ
Sbjct: 196 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEIDDDIEIEIEEKDLKIDTYRASGAGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PTG+VVQCQ +RSQHKN+A A  ML+++LYELEL K++E +N    
Sbjct: 256 HVNKTESAIRITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASN--SV 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 314 EKSEIGWGHQIRSYVLFPYQQVKDNRSGQAFSQTDAILDGDIKKMIEGVLISQK 367


>gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
 gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
          Length = 325

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
 gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
          Length = 321

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 212/309 (68%), Positives = 255/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+R  L+ A++ I+ ++  L D   L+EL   E D + ++E  + ++ ++ E   +Q E
Sbjct: 1   MRDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GEAD ND YLEVHAGAGGTESQDWANML RMY RWAE+RK+K + +E  +GEEAGI
Sbjct: 61  TLLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD I IE+ E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRITIEVKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + TSP DVLDGD+D 
Sbjct: 241 ELELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTSPDDVLDGDIDP 300

Query: 346 FMKATLAIK 354
           F++A+LA +
Sbjct: 301 FIEASLAQR 309


>gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes M1 GAS]
 gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005]
 gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1
           GAS]
 gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS5005]
          Length = 337

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+   
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 59  DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
 gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
          Length = 321

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 218/309 (70%), Positives = 254/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D S ++E    +  ++ E   +Q E
Sbjct: 1   MRERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAAILAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RK+K E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVIDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN   ++KT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 ELELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMEASLAQR 309


>gi|315658891|ref|ZP_07911758.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
 gi|315496015|gb|EFU84343.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
          Length = 334

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W +  +A+ ++ +   L        ++ + + D     EL  EE D  +  E 
Sbjct: 1   MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             N+     +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ 
Sbjct: 61  EMNVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++ +        + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327


>gi|307720247|ref|YP_003891387.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306978340|gb|ADN08375.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 365

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 239/355 (67%), Gaps = 3/355 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +  ++  + G+ +      RL  +     D   W N   A  + +E+  L   +     
Sbjct: 12  NIDMKMKNITGVVEPKKIQTRLQEIQELENDQDFWNNADYAAKIQKEKTQLQRKLDKYNT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ + D   L ++A EEDD   L+   ++   ++ ++   + E LLSGE D+N+A L +
Sbjct: 72  AKNAVEDAKELYDMAKEEDDSESLEALYEDAPNLEKQIRDMEIEVLLSGETDANNAILSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE+R FK E L+   G+EAGIK  ++LIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWAEMLLRMYKRWAERRGFKVEVLDYQAGDEAGIKDVSVLIKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+I I + D RIDTYR+SGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDSNAKRHTSFASVMVSPEIDDDIDITIEDKDIRIDTYRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+R+THI TGVVVQCQ +RSQHKNKA A  ML+++LYELEL   E+ A     
Sbjct: 252 HVNKTESAIRLTHIETGVVVQCQNDRSQHKNKATAMKMLKSRLYELEL--EEQKAKEAGI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIKK 355
           +K+EIGWG QIRSYV+QPYQ VKD R+N   ++ S +LDGD+D+ ++   +A+ +
Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDNMIEGVLIAMNR 364


>gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58]
 gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58]
          Length = 373

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 218/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++ELA EED+ S+L++ +  L  I+  +E  +  +LLSGE D  DA + + 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLEDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A  L+RMY RWAE+R + T+ ++    EEAG+KS T  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L   + E+      + 
Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAE-EDAKKKEMAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +  +
Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363


>gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
 gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
          Length = 370

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 153/354 (43%), Positives = 225/354 (63%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   + ++ L  +   P LW +V  A+ L  +  +L   +  ++E
Sbjct: 11  ELDTTLRSIEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L E+A+EE D +   E    L  ++  ++  +  +LLSGE DS +A + +
Sbjct: 71  LRSRLDDVGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            + AGG ++ D+A ML+RMY RWAE+ ++  E  ++   EEAGIKSAT  +K P AYG L
Sbjct: 131 RSEAGGVDAADFAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  ++I E++ RID +R+SG GGQ
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+A+L  L  ++ E+ A +   
Sbjct: 251 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARL--LARRQEEQRAEMDAL 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+RSYVL PYQMVKDLRT  E  + S VLDGD+D F++A +  ++
Sbjct: 309 RGEGSSWGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGIRWRR 362


>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
 gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
          Length = 372

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 173/353 (49%), Positives = 239/353 (67%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   +      D+  + L  L+      H+W    +AK +++ R+ L+  I  ++ 
Sbjct: 11  ELTERFEEVKESLKLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  L D   LL +  EE+D        + L++ +  ++  +  + LSGE D+ +AYL +
Sbjct: 71  TEKVLSDIRELLHI-TEEEDLETQTLLKEELEKAEQMIKDMEIRAFLSGEMDAKNAYLTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+ DWA MLLRMY RWAEK  ++ E ++I   + AGIKSATLLIKGP AYG+L
Sbjct: 130 QAGAGGVEACDWAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N+RRHTSF+S+ V P +D+SI IEI E D  ++T+RASGAGGQ
Sbjct: 190 KGESGVHRLVRISPFDANARRHTSFASVTVVPQIDESINIEIREEDIEMETFRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TD+AVRI H PTG+VV CQQERSQ++N+ +A  +L+AKLY+L+LQ+ EE     E 
Sbjct: 250 YVNKTDTAVRIRHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRALEG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KTEIGWG QIRSYV QPYQ+VKDLRT +E      V+DG++D F++A L  K
Sbjct: 310 EKTEIGWGHQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYLRWK 362


>gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
 gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
          Length = 356

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 148/339 (43%), Positives = 209/339 (61%), Gaps = 2/339 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD       ++ L T + +P  WQ+   A+  M++           + ++ R+ D   L 
Sbjct: 14  FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            L+ E  D S+  E    +  +  E++  +     SG+ D+ +A L VHAGAGG ESQDW
Sbjct: 74  VLSRE--DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG+LK E GVHRL+R+
Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG GGQ+V    +AVR+T
Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     +  +    WG QIR
Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L 
Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 350


>gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3]
          Length = 332

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 216/320 (67%), Positives = 266/320 (83%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW +  +A+ +MRERQ+L+++++  +    RL + + L+ +  EE+D  I+ ET + +++
Sbjct: 2   LWNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ +Q E LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E 
Sbjct: 62  LKSEIDKRQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSNS+RHTSF+SIWVYPV
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIWVYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VD++IE+++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A
Sbjct: 182 VDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKD RT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDSRTGLENTD 301

Query: 335 PSDVLDGDLDDFMKATLAIK 354
           P  VL+GDLD F++A LA +
Sbjct: 302 PQTVLNGDLDAFIEAALAQR 321


>gi|160878415|ref|YP_001557383.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
 gi|160427081|gb|ABX40644.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
          Length = 333

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P+ W +  +++  M+E ++L + +S    ++ +  D L LLE+  EE+D  ++ E  
Sbjct: 1   MEEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L++    +E  +  +LLS E D ++A L +HAGAGGTES DWA+ML RMY RWA+K+ 
Sbjct: 61  QELEQFIDALEELRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + TE L+  DGEEAG KS TL I G NAYG LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ I+IEI++ D RIDTYR+SGAGGQHVN T SA+RITHIPTG VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY  + ++     +       +I +G QIRSYVLQPY MVKD RTN
Sbjct: 241 FQNKDKAMQMLKAKLYLKKKEENAAKESGIRGEIRDINFGNQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            + ++   VLDG++D F+ A L  
Sbjct: 301 TDVSNALGVLDGNIDPFINAYLKW 324


>gi|239917286|ref|YP_002956844.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
 gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
          Length = 373

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++ELA EED+ S+L + +  L  I+  +E  +  +LLSGE D  DA + + 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A  L+RMY RWAE+R + T+ ++    EEAG+KS T  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L   + E+      + 
Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAE-EDAKKKEMAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +  +
Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363


>gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
 gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
          Length = 325

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + +     +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E++  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + +  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EILPELTEDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3]
 gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3]
          Length = 325

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + + A+   +E   L N      ++ D   ++ ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + 
Sbjct: 59  EKLVELDKTMTAYEMTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   G+EAGIKS TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191]
 gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191]
          Length = 371

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 164/350 (46%), Positives = 224/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS ++   G L       ++L+ L  +      W +   A+ + +E   +   +     
Sbjct: 15  ELSARIKNAGALIRVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADAVKTELETFSA 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D +   E+ALEE+  + + E S  L +I+ E++  +F+  LS  AD  +A + +
Sbjct: 75  LQKEMDDAVTYYEMALEENSETEMGEISSFLIKIENELKEIEFKIKLSDPADRLNAIMHI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA MLLRMYTRWAE    K +  +I  GEEAG+KS +L+I+G  AYG+L
Sbjct: 135 HAGAGGTESCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSVSLMIEGLYAYGYL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+NSRRHTSF+S  V P ++D I+IEI E D  +DT+R+ GAGGQ
Sbjct: 195 KSENGVHRLVRISPFDANSRRHTSFASCDVLPDIEDEIKIEIEEKDLEVDTFRSGGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI HIPTG+VV CQ ERSQ +N+  A  MLRAKLY++E  K+         
Sbjct: 255 NVNKVETAVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEMEKHYG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K +I WG QIRSYV  PYQ+VKDLRT  E +    V+DGDLD FM++ L
Sbjct: 315 QKGDIAWGHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYL 364


>gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora]
 gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora]
          Length = 354

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 149/342 (43%), Positives = 208/342 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W    +A+  MR+   +   +  +++ Q  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D S+L E ++ +QR+K  ++  + E LL+G  D   A + ++AGAGGT++
Sbjct: 63  ATLELYNIEPDESMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW+E    K    EI +GEEAGIKS T  I G  AYG+L+ E+G HRL
Sbjct: 123 QDWARMLLRMYTRWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ I++ I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLNEDIDMFIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADIRGEIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV  PYQMVKDLRTN E T    V+DGDLD F++A L 
Sbjct: 303 QIRNYVFHPYQMVKDLRTNKETTDVQGVMDGDLDLFIQALLR 344


>gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1]
 gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           SSI-1]
          Length = 337

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 148/336 (44%), Positives = 212/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+   
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D  + +E  +NL ++       +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 59  DEDDFLKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
 gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
          Length = 396

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 209/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +      D+   +++ L  +   P LW +   A+ +             + E
Sbjct: 31  EARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTE 90

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              RL D   L  L +EE+D    QE    L+++  ++   + ++LL GE D+  A + +
Sbjct: 91  AGQRLDDIDTLYSLGMEEEDEDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAE+ ++K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 151 RSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKL 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+NSRR TSF+++ V P+V+ +  I++ +SD R+DTY + G GGQ
Sbjct: 211 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQ 270

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVR+TH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+  + E       +
Sbjct: 271 GVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQ-EEEAAKKKELA 329

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E + P  V DGD+D F+ A +  +
Sbjct: 330 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWR 382


>gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str.
           230613]
          Length = 325

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 148/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
 gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
          Length = 325

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVEILLDFLAE--DESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|289551384|ref|YP_003472288.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180915|gb|ADC88160.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 334

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 154/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W +  +A+ ++ +   L        ++ + + D     EL  EE D  +  E 
Sbjct: 1   MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++     +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ 
Sbjct: 61  EMDVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180

Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++ +        + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327


>gi|282865194|ref|ZP_06274247.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
 gi|282560117|gb|EFB65666.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
          Length = 368

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D   L E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFELAEDEGDADALAEAEAELVSVRKALDEMEVRTLLSGEYDAREAVVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFTVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEIGNPEAVFNGEIDGFIEAGIRWRK 364


>gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|6093958|sp|O83585|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 368

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 214/342 (62%), Gaps = 1/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD      R++ L      P  W     A+ L+ E + L   +   + ++    D 
Sbjct: 15  YGGVFDVAAYEARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALRRESADL 74

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L ELA E  D S+  E S     I    E      LL  E D  DA++ +H+GAGG E
Sbjct: 75  RALYELAREAQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHSGAGGVE 134

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA ML+RMYTRWAE+R F    +++ + E  G+KS TL I G +A+G+LKGE GVHR
Sbjct: 135 ACDWAQMLMRMYTRWAERRSFCVHIVDLLESE-GGVKSVTLKICGSHAFGFLKGETGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS +RRHTSF+S +V+PV+DD +E+ I   D R+DTYR+ GAGGQHVN TDSA
Sbjct: 194 LVRISPFDSAARRHTSFTSTYVFPVLDDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSA 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ ERSQ  N+A A ++LRA+LY  E QK+++      S K +I WG
Sbjct: 254 VRITHLPTGIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEKKDISWG 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYV  PY MVKD R+  E  +   V+DG L+ F+++ L
Sbjct: 314 NQIRSYVFHPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYL 355


>gi|317124427|ref|YP_004098539.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
 gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
          Length = 370

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 219/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   ++ + G+ D D   +++  L  +  +P+LW +  +A+ +       +     +  +
Sbjct: 12  LRATMDSVRGVTDLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSRANAERDRVLSM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+E+A EE D   + E   +L +IK ++   +  +LLSGE D  +A + + 
Sbjct: 72  DSRINDLETLVEMATEESDQDTMDEALRDLAKIKKDLGELEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KSAT  +  P A+G L 
Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAFGHLN 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI E++ +ID +R+SG GGQ 
Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDSIEIPENELKIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+ +  E       + 
Sbjct: 252 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LQRKAEEAAVKKEMAG 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT+ E  +P+ V DGD+D F++A +  +
Sbjct: 311 DVKASWGDQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIEAGIRWQ 362


>gi|296876160|ref|ZP_06900214.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
 gi|296432871|gb|EFH18664.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
          Length = 336

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 213/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ ILL+   E
Sbjct: 1   MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S+ +E  + L+ +   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLL
Sbjct: 61  --DDSVKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
 gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
          Length = 373

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 142/355 (40%), Positives = 221/355 (62%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  +   D   ++++ LN K   P LW +   A+ +     H  + +  I ++
Sbjct: 12  LRTTMENIIAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71

Query: 63  QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++++A E+ D    IL E   +L++++ ++   +  +LL GE D  +A + 
Sbjct: 72  SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L   + E+      
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
 gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
          Length = 371

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 221/355 (62%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H  +    + E+
Sbjct: 12  LDATLTTVEKVLDLEELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSEFRKVSEL 71

Query: 63  QDRLCDNLILLELAL-EEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  EE D   S L +   +   ++ ++E  + +++L+GE D  DA +
Sbjct: 72  RQRLDDLPVLYELAEAEEGDDRVSALADADADRAALRADIEAMEVKTMLAGEYDQRDALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAG+KSAT  +K P  YG
Sbjct: 132 NIRSGAGGVDAADWALMLMRMYIRWAEQHGYGVEVYDTSYAEEAGLKSATFAVKAPYMYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV  +  I+I E+D ++D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVQTTDHIDIDENDVKVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +  
Sbjct: 252 GQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQAKLLERKRQEERAELDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +       WG Q+RSYVL PYQMVKDLRT +E  +PS VLDG+LD F++A +  +
Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTGVEDNNPSAVLDGELDKFIEAGIRWR 365


>gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 346

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 152/341 (44%), Positives = 209/341 (61%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
             FD      ++  L  KT +   W +  +A++++R+   + + +     +Q  L     
Sbjct: 2   SHFDLTARRYKIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDE 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL  E+ D  I +      Q ++      + + LLS E D + A LE+H GAGGTES 
Sbjct: 62  TQELLKEDFDEEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY+RWAEK +FK   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWADMLYRMYSRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D+  RRHTSF+S+ V P  +D IEIEI   D  ++T RASGAGGQH+N TDSAVR
Sbjct: 182 RISPFDAGGRRHTSFASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG+V  CQ  RSQH+N+ +A  +L+++LY+  ++++E      +       WG Q
Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYV  PY MVKD RTN E +    V+DGDLD F+ A L 
Sbjct: 302 IRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYLK 342


>gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 370

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  + G+ D      +++ L+ +   P LW +   A+ +          ++ +K +
Sbjct: 13  LRSTLESIEGVSDPVALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNRVKSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+EL  E  D   L E    +  I+ +++  +  +LLSGE D+ DA + + 
Sbjct: 73  GRRIDDVETLVELGQEMGDEDSLTEAEAEVVGIRKDLDALEVRTLLSGEYDARDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  F T+ ++    EEAG+KSAT  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPYAFGNLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDSVEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  Q+ E       + 
Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LVRQQEEAAKKKELAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+RSYVLQPYQMVKDLRT  E  + + V DG +D+F++A +  ++
Sbjct: 312 DIKASWGDQMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGIRWRR 364


>gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD]
 gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD]
          Length = 378

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 142/351 (40%), Positives = 213/351 (60%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             + + +    D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ ++
Sbjct: 14  EAKYSLISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R+ D   L+EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + +
Sbjct: 74  QRIEDTKTLIELGEEEGDADSMNEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ V
Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+    E       +  
Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
 gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Puerto Rico]
 gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
          Length = 338

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 171/332 (51%), Positives = 227/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL++A +E D  
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSE 60

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            L      L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY R
Sbjct: 61  FLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIR 120

Query: 144 WAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WA     F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRR
Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ
Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ  RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+M
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKDLRT  E      VLDGDLD F+ A L  K
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1118]
          Length = 332

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 204/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ E   L        ++Q    D    +EL  EE D  + +ET 
Sbjct: 1   MAQPDFWNDQEKAQKLISENNVLKEKRDSFLKLQKGYEDESTAVELLREEPDPDLQKETE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L  ++ E    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  EDLATLQDEFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADANGVMDGKLQPFIYSYLQW 324


>gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 327

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 152/323 (47%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W N+ EA+ +  E ++L + +     +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FSIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
 gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
          Length = 338

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 171/332 (51%), Positives = 227/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL++A +E D  
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSE 60

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            L      L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY R
Sbjct: 61  FLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120

Query: 144 WAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WA     F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRR
Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ
Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ  RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+M
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKDLRT  E      VLDGDLD F+ A L  K
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|325478551|gb|EGC81663.1| peptide chain release factor 2 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 347

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 159/345 (46%), Positives = 227/345 (65%), Gaps = 2/345 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +  LFD       +  L  K++ P  W +   A+  M +     + +    +++D + DN
Sbjct: 1   MEILFDPARLKDEIEKLEKKSQSPDFWNDSDAAQKTMADLALKKDDLEDYNKLKDGIADN 60

Query: 70  LILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             +L+L    +D  +  ++E   +L+++    +  + ++ LSGE D N+AYL ++AGAGG
Sbjct: 61  TDMLDLVELSEDSELKTIEEVEISLKKLDKLAQAMKLKTQLSGEYDKNNAYLSINAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+ DWA+ML RMYTR+ + R FK +  ++++ E  GIKS T+ +KG  AYG+LKGE+GV
Sbjct: 121 LEATDWADMLFRMYTRYFDDRGFKYDIKDLNNEEAGGIKSVTIHVKGSYAYGYLKGEKGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS SRRHTSFSS+ ++P +DD I+I+I  SD RIDTYRASGAGGQHVN TD
Sbjct: 181 HRLVRISPFDSQSRRHTSFSSVDIFPELDDDIQIDIDPSDLRIDTYRASGAGGQHVNKTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGVV   Q ERSQ +N+  A N+L +KL +++ +++ E     +   ++I 
Sbjct: 241 SAVRITHIPTGVVATSQAERSQIQNRQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIA 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYV QPY MVKD RTN E  +   V+DG++  F+ A LA
Sbjct: 301 WGSQIRSYVFQPYTMVKDHRTNFEMGNVESVMDGNIQGFIDAYLA 345


>gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
 gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
          Length = 360

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 152/343 (44%), Positives = 222/343 (64%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      ++  L  +   P  W +   A+  ++E   L +++   ++ Q +L D  
Sbjct: 12  RTIFDLPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAK 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL   E+D S+LQE   NLQ++  E+E  + + LLSG  D+    L ++AGAGGT++
Sbjct: 72  AISELLELEEDTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW EKR +K   +E  +G+EAGIKSATL I+G  AYG+LKGE+G HRL
Sbjct: 132 QDWAAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ + + P + ++++ +EI E D  I T RA G GGQ+VN  ++A
Sbjct: 192 VRISPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETA 251

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+ H+PTG+ V+C +ERSQ +NK +A  +L+AKL  + +++R +          E  WG
Sbjct: 252 VRVVHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEIRGDMVEAAWG 311

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIR+YV  PYQMVKDLRTN+E +    V+DGDLD F++A L 
Sbjct: 312 NQIRNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYLR 354


>gi|78187873|ref|YP_375916.1| peptide chain release factor 2 [Chlorobium luteolum DSM 273]
 gi|78167775|gb|ABB24873.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           luteolum DSM 273]
          Length = 363

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 150/345 (43%), Positives = 224/345 (64%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD D   +++  L   + +P  W +   A  +++E     + +   +++  +  
Sbjct: 16  NSYGGIFDVDQRKEKIEDLEKVSGNPEFWNDQKAAHAVLKELNENRSWVEGYEKLAGKAE 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                L +A E +D S  +E + ++  I+ E+   +F+++LSG+ D  +A + +HAGAGG
Sbjct: 76  SCRDELAIADELEDESFERELTASIDAIEQEIAAIEFKNMLSGKDDPGNAIITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVYTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I 
Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREVEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGD+DDFM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDIDDFMEKYLS 359


>gi|57168993|ref|ZP_00368122.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|305432246|ref|ZP_07401409.1| peptide chain release factor RF2 [Campylobacter coli JV20]
 gi|57019659|gb|EAL56348.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|304444594|gb|EFM37244.1| peptide chain release factor RF2 [Campylobacter coli JV20]
          Length = 365

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 230/353 (65%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN G   
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAG--E 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 371

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 174/350 (49%), Positives = 243/350 (69%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           L + +N      + D   + +S ++     DP+ W    E+K+LM+E+      +    E
Sbjct: 13  LKKDINSFRTAMNEDELKKAISEVDNLSMSDPNFWN-SKESKVLMKEQAINKKKLEEWHE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D  +L+EL  E  +  +  +   +++ ++  + + + + +LSG+ D N+A + +
Sbjct: 72  LTGLLEDTEVLIELYKE-GEQGVEADIETSIRTLEKTIAHFELKLVLSGQNDGNNAIITI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTE+ DWA ML RMYT +AE+  +K + L+  +GEEAGIK+AT+ IKG   YG+L
Sbjct: 131 NSGAGGTEANDWAAMLYRMYTHYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISPYDS +RRHTSF++++V P ++D IEI+ISE+D  IDTYRASGAGGQ
Sbjct: 191 KGETGVHRLVRISPYDSANRRHTSFAAVFVMPEIEDDIEIDISEADLHIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG VV CQ ERSQHKNKA A  +L+++LYELE+ K+ E     ES
Sbjct: 251 HVNTTDSAVRITHVPTGTVVTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLES 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +KTEIGWG QIRSYV+ PY+MVKDLRT  E  +   V+DG+LD F++A L
Sbjct: 311 TKTEIGWGNQIRSYVMHPYKMVKDLRTRHETGNVDAVMDGNLDAFIRAYL 360


>gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
 gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
          Length = 370

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 232/353 (65%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  +  +   D    +LS + T+  DP+ W N   A +L +E+  + N +   +  
Sbjct: 13  LEQKVKNIASIIKPDELRVKLSEIETQENDPNFWNNAKNAAILGKEKTKITNLLKAYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ++A  E D   L+   ++  +++  +   +   LLSGE D+ +A + +H
Sbjct: 73  FNALNDANELFDMANSESDDETLKALFEDAPKLEDSITSLEISMLLSGENDNKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E  AN     
Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAAAN--SGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+E+GWG QIRSYVL PYQ VKD R+N   ++   +LDGD+   ++  L   K
Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363


>gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1]
          Length = 371

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 226/349 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q + L G  D      RLS +  +   P  W N  +   +++E+  L+  I+ ++ +
Sbjct: 14  LFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D    L LA E++    L+   + + R++  +E  +   LLSG+ D   A LE+H
Sbjct: 74  ETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+QDWA MLLRMY RWA+   +KTE L+  DG+EAGIKS TL I GPNAYG LK
Sbjct: 134 PGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+G+HRL+RISP+D++ RRHTSF+S+ V P V   I+IEI ++D RID +R+SG GGQ 
Sbjct: 194 GERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQS 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+THIPTG+V QCQ E+SQH NK  A  +LR +LYELEL+K EE       +
Sbjct: 254 VNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  IG+G QIR+Y LQPY++VKD RTN E      VLDG LD  ++  L
Sbjct: 314 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 362


>gi|332290838|ref|YP_004429447.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168924|gb|AEE18179.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 368

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 159/351 (45%), Positives = 227/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L    D D     +     KT DP+ W +  EA+  M+  +     ++  +E 
Sbjct: 10  LQERVDGLRRYLDVDRKRIEIQNEEEKTFDPNFWNDPKEAEAFMKTLRSKKKWVTDYEEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D  +L E A E +     +   D   +    +E  +F ++LS E D     L++ 
Sbjct: 70  QTFVEDLEVLYEFAKEGEAPE--ENVQDRYDKAAAFIEDIEFRNMLSEEGDELSCVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  +AEK+ +K + L   +G+ AGIK+ +L I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWAAMLMRMYLMYAEKQGWKVKELNFQEGDVAGIKTVSLEIEGDFAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINPADYDIVTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+ + C   RSQH N+A+A  MLR++LYELEL+K+ E  N  E+ 
Sbjct: 248 VNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLYELELRKQMEARNAIEAD 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K  I WG QIR+YVL PY++VKD+RT +E  +   VLDG++D F+K  L +
Sbjct: 308 KKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDLFLKGYLMM 358


>gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
 gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
          Length = 333

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 213/320 (66%), Positives = 263/320 (82%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW N  +A+ +MRERQ+L+N+++  +     L + + L+ +  EE+D  I+ E  + + +
Sbjct: 2   LWNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ ++ E LLSGEADSND YLE+HAGAGG ESQDWA+MLLRMY+RWAE+ K K E 
Sbjct: 62  LKKEIDKRRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSATLLIKG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIW+YPV
Sbjct: 122 LETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWIYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V+++IE+++S++D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A
Sbjct: 182 VNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301

Query: 335 PSDVLDGDLDDFMKATLAIK 354
           P  VL+GDLD F++A LA +
Sbjct: 302 PQTVLNGDLDIFIEAALAQR 321


>gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555]
 gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016]
 gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555]
 gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 328

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++  A+ +  E ++L+  ++    +   + D  ILLE+  EE+D    QE  
Sbjct: 1   MQEPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKEEEDSMSFQEVM 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++ I+ +VE  + E LL GE D N+A L +H G GGT++QDW  MLLRMY RWAEK  
Sbjct: 61  KDIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEKMG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   +++ + E+AGIKS +L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI   D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 181 EVLPELTGDQDIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK QA  +L+AKL EL+ +  ++          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 HYNKEQALKILKAKLVELKERAHKDRIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E ++ S V+DGD+D+F+K  L  +
Sbjct: 301 VESSNVSSVMDGDIDNFIKGYLKQQ 325


>gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
 gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
          Length = 374

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQGEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|302190497|ref|ZP_07266751.1| peptide chain release factor 2 [Lactobacillus iners AB-1]
          Length = 332

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 145/324 (44%), Positives = 205/324 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             D   W +   A+ ++    ++   +   + +   L D    +EL   E +  +L E +
Sbjct: 1   MADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELYNMEPENDMLMEIT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++++K E    +   LLSG+ D ++A LE+H+GAGGTE+ DWANML RMY RW +   
Sbjct: 61  AEVEKLKNEFNNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
              E  +   G+EAG+KS ++ ++G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SI IEI+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A +MLRAKL++LE  K+ +     + ++ EI +G QIRSYV  PY MVKD RT+
Sbjct: 241 FQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQKEINFGSQIRSYVFHPYNMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +    V++G+LD F+ A L  
Sbjct: 301 YETSDTIGVMNGNLDPFIYAYLQW 324


>gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 374

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGREEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 327

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W + I A+   ++   L +       +Q+   +  + LE+   E+D S+  +  
Sbjct: 1   MTESDFWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEML--EEDDSVKDDLE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ +   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ASLETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD++ F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323


>gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 373

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 217/354 (61%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 15  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA E+ + +       +   + ++ ++E  +  +LLSGE D  +A + 
Sbjct: 75  RARLDDLPVLYELAAEDGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 134

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 135 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 194

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 195 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 254

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  +
Sbjct: 255 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDALK 314

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 315 GEGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 367


>gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
 gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
          Length = 350

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 161/344 (46%), Positives = 224/344 (65%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           + GLFD D   + L  L  ++ + + WQ+ + A  +  +   L   I   +E++ ++   
Sbjct: 1   MRGLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAI 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LE A   +D +I ++        + ++   + + LLSGEAD N  +L ++AGAGGTE
Sbjct: 61  EFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S DW  ML RMY+RWA K ++  E ++  DGE  GIK  T+   G  AYG+ K E+GVHR
Sbjct: 121 SCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DSN +RHTSF+S+ V+P +DD I+IEI  +D RIDT+R+SGAGGQHVN T+SA
Sbjct: 181 LVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+P+GVVV CQ ERSQ +N+     ML+AKLY+  LQ+R E  ++    K EI WG
Sbjct: 241 VRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            QIR+YV QPY +VKD+RT  E  +   +LDG+ LD+F+KA LA
Sbjct: 301 SQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 344


>gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
 gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
          Length = 322

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 202/309 (65%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  +++ +  I  ++  L D L L+EL   E+D    +E    L+ +  +   +Q E
Sbjct: 1   MRERTQIEDQLGAIARLERDLDDALTLVELGESENDADTEKEGIAQLEALLKDARERQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGEAD ND Y+EVH+GAGGTES DWA ML RMY RWAE++KFK E +E   G+EAGI
Sbjct: 61  ALFSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSGDEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD I+I+++E
Sbjct: 121 KSATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDKIDIQVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KRE  AN  E+SKT+IGWG QIRSYVLQPYQ+VKDLRT     +PS+VLDG+LDD
Sbjct: 241 EMELKKREAEANAVEASKTDIGWGHQIRSYVLQPYQLVKDLRTGHTSGTPSEVLDGELDD 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMQASLAQR 309


>gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547]
 gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus
           sedentarius DSM 20547]
          Length = 370

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 215/354 (60%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   +  +  + D     ++L+ L  ++  P LW +    + +      +   +  I+ 
Sbjct: 11  ELRTTMESVREVIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  +L+E+  EE D   L E +  L  I+  VE  +  +LLSGE D  +A + +
Sbjct: 71  MDSRIDDLEVLVEMGTEEGDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+ ++ T+ L+    EEAG+KS T  +  P AYG L
Sbjct: 131 RAGAGGVDAADFAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISPYD+  RR TSF+++ V PV++ +  IEI E++ ++D +R+SG GGQ
Sbjct: 191 VVEGGTHRLVRISPYDNQGRRQTSFAAVEVVPVIEQTDSIEIPENEIKVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L+ +  E       +
Sbjct: 251 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LQRKAEEAAERKELA 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVL PYQMVKDLRT  E  +   V DGD+D F++A +  K+
Sbjct: 310 GDIKASWGDQMRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWKR 363


>gi|34556562|ref|NP_906377.1| peptide chain release factor 2 [Wolinella succinogenes DSM 1740]
 gi|81833248|sp|Q7MAP4|RF2_WOLSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|34482276|emb|CAE09277.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Wolinella succinogenes]
          Length = 368

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 240/350 (68%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS + + +  +   D+   RL  +         W +  +A  + +E++ L+  +   +E
Sbjct: 12  ELSTKRDNIAKIIKPDSIENRLGEIEALEHSEGFWNDATKAGEVQKEKRKLERILKKYEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               + D   L E+A +++D   L    +    ++ E++  + E +LSGE D ++A + +
Sbjct: 72  ANQAINDAKELFEIATQDNDEETLGLLFEESGHLEKEIKSVEIEVMLSGEHDGSNAIITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+R FK E L+  +GEEAGIK A+ +IKG NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERRGFKVEVLDYQEGEEAGIKDASFIIKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+D+N++RHTSF+S+ V P VDD I+IEI E D R+DTYRASGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFTSVMVSPEVDDDIDIEIEEKDLRLDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL KR   A     
Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELAKR--SAEYDSM 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGDLD+ ++  L
Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDTRSNIAYSNIEAILDGDLDELLEGVL 359


>gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
 gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
          Length = 378

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 142/351 (40%), Positives = 212/351 (60%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             + + +    D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ + 
Sbjct: 14  EAKYSSISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVD 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R+ D   L+EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + +
Sbjct: 74  QRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ V
Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+    E       +  
Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
 gi|229470354|sp|A9WPT6|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
          Length = 374

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 221/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D D+  + ++ L+ +   P LW N  EA+ +  +  H  + +  ++ +
Sbjct: 16  LRATYDSIERVIDADSLRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+ELA  E D   L E S  L  ++  ++  +  +LL+GE D  +A + + 
Sbjct: 76  TARIDDLEVLVELAESEHDEDSLAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L 
Sbjct: 136 SGAGGVDAADFAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ++D R+D +R+SG GGQ 
Sbjct: 196 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNDIRVDVFRSSGPGGQS 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG VV  Q E+SQ +N+A A  +L+++L  L+  ++E+      + 
Sbjct: 256 VNTTDSAVRLTHLPTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKK-QQEDAEKKALAG 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S VLDGD+DDF+ A +  +
Sbjct: 315 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGIRWR 366


>gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88]
 gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88]
          Length = 325

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 158/324 (48%), Positives = 223/324 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P  W+++  A+ + ++ + + + +     +++R+ D+L+L+EL  EE+D S   E  
Sbjct: 1   MQEPDFWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAGEVL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +K E+E  + E LLSGE D N+A + +HAG GGT++QDW  MLLRMYTRWAEK+ 
Sbjct: 61  KELVLLKKEIESFRIEVLLSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K + L+   G+EAGIKS TL I G  AYG+LK E+GVHR+VRISPY++N +R TSF+S+
Sbjct: 121 YKVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + +  +IEI + D ++DTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 181 ELIPELTEDQDIEIIDDDLKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+  A  ML+AKL EL+  + +E          ++GWG QIRSYV  PY +VKD RT+
Sbjct: 241 HSNRDTALKMLKAKLVELKEAEHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + V+DGD+D F+   L  
Sbjct: 301 AETGNLTAVMDGDIDLFINEYLKA 324


>gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
 gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
          Length = 382

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 218/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D      +++ L+ +   P+LW +   A+ +          +  + +
Sbjct: 24  ELRTTLESIQAVSDPTALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAK 83

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D   L+EL +E +D   L E    L  I+ ++   +  +LL+GE D  +A + +
Sbjct: 84  LGGRIDDLETLVELGVEMEDEDSLAEAEVELTGIRKDLGELEVRTLLNGEYDQREAVVTI 143

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 144 RSGAGGVDAADFAEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHL 203

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ
Sbjct: 204 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPESEIKVDVFRSSGPGGQ 263

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  +  E+      +
Sbjct: 264 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LVRKAEEDAKKKELA 322

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVLQPYQMVKDLRT  E  +PS V DGD+DDF++A +  ++
Sbjct: 323 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 376


>gi|315187113|gb|EFU20870.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           thermophila DSM 6578]
          Length = 364

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 168/352 (47%), Positives = 230/352 (65%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R+    GG+F+  +  +++S L  +T  P LW +   A+ ++   + L         +
Sbjct: 1   MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60

Query: 63  QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              + D   L +LA EE+D S     +E    L   + +    +   LL+ E D  DAYL
Sbjct: 61  VQEVEDIHTLYDLAAEENDPSQEEEEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYL 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG  A+G
Sbjct: 121 TIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFG 179

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I   D RIDTYR+ GAG
Sbjct: 180 YLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAG 239

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+  A  MLR++LYE   Q REE     
Sbjct: 240 GQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKK 299

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              K +I WG QIRSYV QPY MVKDLRT +E  +   V+DGDLD F++A L
Sbjct: 300 AIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 351


>gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
 gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
          Length = 336

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 151/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ ILL+   E
Sbjct: 1   MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S+ +E  + L+ +   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLL
Sbjct: 61  --DDSVKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|294102045|ref|YP_003553903.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
 gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
          Length = 368

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 219/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L    + L    D      ++  L  KT  P  W    EA+ + +E     + +   K+
Sbjct: 12  ELRSLKDELQESLDLPILEIKIQELEEKTLKPDFWG-SDEARKVTQELARYQDKLDSWKK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I +   D  I+ E+  EE+D  + ++       +K E+E +Q   LLS + D  +A + V
Sbjct: 71  IAEDYEDLEIIEEMLKEEEDRELQKDFEQKAFSLKKEIERQQLIELLSEDYDQGNAIVSV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GG +SQDWA ML RMY RW E+  F+ + L++    E GI + TLL++G  AYG+L
Sbjct: 131 HAGSGGLDSQDWAEMLYRMYARWMEQNDFRVKVLDLIKDSEGGISNVTLLVEGSYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS  RRHTSF+S+ + P + +  +IEI   D RIDTYR+SGAGGQ
Sbjct: 191 KSEKGVHRLVRISPFDSAGRRHTSFASVDIVPELPEDEDIEIRTEDLRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH P+G+VV CQ ERSQH NKA A  +L++KLYE  +++R    +    
Sbjct: 251 HVNMTDSAVRITHFPSGIVVSCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K EI WG QIRSYVL PY +VKD RT  E  +   VLDGD+DDF+ A L  KK
Sbjct: 311 EKKEISWGSQIRSYVLHPYTLVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWKK 364


>gi|289642137|ref|ZP_06474289.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
 gi|289508100|gb|EFD29047.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
          Length = 366

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 219/353 (62%), Gaps = 4/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   +R + L  +  DP LW +   A+ + R    +   IS ++ +
Sbjct: 12  LDATLAGIEAVLDLDTLRRRAADLEREAADPQLWSDQDRAQAVTRRLSSVRGDISRVEAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D +     AL+  D  +L E +++L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 72  RRRLDDVIA----ALDLGDDDLLAEAANDLPTLARDISALEVRTLLSGEYDERDAIVQLS 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  +  E  +  + EEAG+KSAT  IK P AYG L+
Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYAAEVFDTSEAEEAGLKSATFQIKAPYAYGTLR 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  +EI + + RID +R+SG GGQ 
Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVEQSDHVEIDDKELRIDIFRSSGPGGQG 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 248 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRLTGG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++ +G QIR+YVL PYQMVKDLRT +E +  + VLDGD+D+F+ A +  ++
Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSGTAAVLDGDIDEFIDAEIRWRR 360


>gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03]
          Length = 325

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 154/325 (47%), Positives = 212/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +   A+ + ++ +    +I   + +  +  D   L E+A  + D S L +  
Sbjct: 1   MSDPSFWSDRKNAEKISKQARLFKESIEAWETLTSQHKDLCELQEMAAADGDESALSDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +   VE  +F S+L G  DS +A L +H+GAGGTE+ DWA MLLRMY RW E+  
Sbjct: 61  NEVDELTKNVESFEFRSMLDGVDDSKNAILVIHSGAGGTEAADWAEMLLRMYNRWTERNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K++ ++I  GEEAGIK  T+ + G  AYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKSKVMDIQPGEEAGIKGVTIEVSGEYAYGYLKAEAGVHRLVRISPFDSGGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP VDD IE+++ + D +I+ YRA GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQ
Sbjct: 181 FVYPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNKA A  +L A++Y+    +  +     E+SK  I +G QIRSYV  PY +VKD RTN
Sbjct: 241 FKNKATALKVLTARVYQNIKDEENKKLKEVENSKKSIDFGSQIRSYVFHPYNLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F++A L ++
Sbjct: 301 YETGNVQAVMDGDIDKFIRAFLTLE 325


>gi|281357586|ref|ZP_06244073.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
 gi|281315843|gb|EFA99869.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
          Length = 364

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 184/354 (51%), Positives = 241/354 (68%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++  L      ++    ++ L  K   P  W N   A+  + +     N +   ++
Sbjct: 13  ELKGRIGHLEEFLHIEDRKAEMAELEQKMSAPDFWDNKESAQNTVAQLSACRNLLEPFRK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D    +ELA E  D   LQET  + +R+   ++  +  S LSG+ D ++ Y  V
Sbjct: 73  LQSEVEDYSASVELAAE--DEEFLQETEISYRRLLKSLDRMEIMSFLSGKFDRSNLYFSV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWANMLLRMY R+ E+R +K E +++  GEEAG+KSATL + G  AYG++
Sbjct: 131 HAGAGGTESCDWANMLLRMYRRYFERRGWKDEVIDLQPGEEAGVKSATLHVTGEFAYGYM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+DSN+RRHTSF S+ V+P +DD IEIEI ES  RIDTYR+SGAGGQ
Sbjct: 191 KGEKGVHRLVRISPFDSNARRHTSFVSVDVFPELDDDIEIEIDESQLRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RITH+PTG+VV CQ ERSQHKN+A A  ML+AKLYE E +KR   A+    
Sbjct: 251 HVNTTDSAIRITHLPTGIVVCCQNERSQHKNRATAMKMLKAKLYEFEEEKRRNEADAIRG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K E GWG QIRSYVLQPYQMVKDLRT +E +  + VLDGD+D+F++A L   +
Sbjct: 311 EKAENGWGSQIRSYVLQPYQMVKDLRTEVETSDTAGVLDGDIDEFIEAYLKSAR 364


>gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
 gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
          Length = 359

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 166/354 (46%), Positives = 238/354 (67%), Gaps = 4/354 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L+ ++N +    D     + L  +  + ED  +W +    + L R++  ++  +  ++
Sbjct: 6   IQLADKINKIKEYLDPPKRKKELDDIQKQLEDSSVWNDYQLLQNLKRKQSSIEQKLKTVE 65

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++ +   L L E    EDD S  QE  DN++ +  +VE  + E+ LSGE D ++A + 
Sbjct: 66  ELENDVDTLLELSEFV--EDDESYKQELEDNIKELTKKVEKAETETFLSGEHDFSNAIVT 123

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H+GAGGTES DW +ML RMY+ W +  ++K E +++  G+EAG KS T L+ G  AYG+
Sbjct: 124 IHSGAGGTESCDWVSMLFRMYSMWCDNNEYKIEVMDLQPGDEAGYKSITFLVSGEKAYGY 183

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+D+N RRHTSF+S+ V P ++D  EI+I   D +IDT+RASGAGG
Sbjct: 184 LKNENGVHRLVRISPFDANKRRHTSFASVSVLPEINDDTEIDIDPKDLKIDTFRASGAGG 243

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSA+RITHIPTG+VV CQ ERSQHKNKA A  +L+AKLY+LE +K+++     E
Sbjct: 244 QHVNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKAKLYQLEEEKKKKELEKLE 303

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS--DVLDGDLDDFMKATLA 352
             K +I WG QIRSYVL PY+MVKD RT +EK   +   VL+G++DDF++  L 
Sbjct: 304 GEKKKIEWGSQIRSYVLHPYKMVKDHRTGVEKKDVAALAVLNGEIDDFIREALK 357


>gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1]
 gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1]
          Length = 378

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 142/351 (40%), Positives = 212/351 (60%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             + + +    D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ + 
Sbjct: 14  EAKYSSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVD 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R+ D   L+EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + +
Sbjct: 74  QRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ V
Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+    E       +  
Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
 gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
          Length = 374

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   + + +    D D     +  L  +   P LW N   A+ +  +    ++ +  +  
Sbjct: 12  EARAKYDSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAESQLKRLTS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E  + +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGQEEQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  ++I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHVDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+++F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAGIRWR 363


>gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205]
          Length = 356

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 143/341 (41%), Positives = 207/341 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR+   +   +  + + +  + D  
Sbjct: 3   RTVFDVAALKARQQDLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +E+   E D  +L E+   L++++ +++  + E LLSG  D   A + ++AGAGGT++
Sbjct: 63  ATVEIYGLEPDDELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ DGEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRT  E T    V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|325066934|ref|ZP_08125607.1| peptide chain release factor 2 [Actinomyces oris K20]
          Length = 373

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 147/357 (41%), Positives = 217/357 (60%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE+      IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAETDLAAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+  +  + L     EEAG+KS T  +  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+  + E+    
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A]
 gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68]
 gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A]
 gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium
           longum subsp. longum F8]
 gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68]
 gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
          Length = 374

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33]
 gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33]
 gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33]
 gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33]
 gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1]
 gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14]
          Length = 325

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + + A+   +E   L N      ++ D   ++ ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + 
Sbjct: 59  EKLVELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   G+EAGIKS TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131]
 gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131]
          Length = 326

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +LLE+   ++D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML--DEDDSLKEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     
Sbjct: 59  ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG+++ F+ A L  +
Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323


>gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24]
 gi|229576665|sp|A0JYC5|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp.
           FB24]
          Length = 371

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 139/352 (39%), Positives = 219/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + + +   + ++ L+ +  +P+LW +   A+ +     H  + +  +  +
Sbjct: 13  LRATYSSIENVSNVEELKEDIAELSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +EDD   + E +  L+ I+  ++  +  +LLSGE D  +A + + 
Sbjct: 73  VSRIDDLEVLVELGQDEDDADSMGEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + T  ++    EEAG+KSAT  +  P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I +++ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +L+++L  L+  ++E+      + 
Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAALRVLQSRLLLLKK-EQEDAEKKAFAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF+ A +  +
Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363


>gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797264|gb|EDN79684.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
          Length = 373

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 142/355 (40%), Positives = 220/355 (61%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  +   D   +++  LN K   P LW +   A+ +     H  + +  I ++
Sbjct: 12  LRTTMENIIAVVQPDKLREQIVELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71

Query: 63  QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++++A E+ D    IL E   +L++++ ++   +  +LL GE D  +A + 
Sbjct: 72  SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L   + E+      
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
 gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
          Length = 368

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 220/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + +  +   R   L  K  DP LW +   A+ +  E   +   +  ++ +
Sbjct: 12  LDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  I+ ELA EE + + +    + L  ++ +++  +  ++LSGE DS +A + + 
Sbjct: 72  RSRLTDLPIMYELAEEEGEGTDI--ADEELTDLRADIDALEVTTMLSGEYDSREALINIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK+  K E  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I +S+ R+D YR+SG GGQ 
Sbjct: 190 VEQGVHRLVRISPFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        +
Sbjct: 250 VNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKR-QEERAELDALGA 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+R+YVL P+QMVKDLRT  E   P  VLDGDLD F++A +  +K
Sbjct: 309 GGNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361


>gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
 gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
          Length = 368

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 233/353 (66%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  +  +   +    +LS +  +  DP+ W N   A +L +E+  + N +   +  
Sbjct: 13  LEQKVKNIASIIKPNELRVKLSEIEMQENDPNFWNNAKNAAVLGKEKTKITNLLKAYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ++A  E+D   L+   ++  +++  +   +   LLSGE D+ +A + +H
Sbjct: 73  FNALNDANELFDMANSENDDETLKALFEDAPKLEDNITSLEISMLLSGENDNKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E +AN     
Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAVAN--SGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+E+GWG QIRSYVL PYQ VKD R+N   ++   +LDGD+   ++  L   K
Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363


>gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS278]
 gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS278]
          Length = 323

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 249/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E+D  ++ E  + L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE   FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  S VL+GDLD+
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
 gi|254790908|sp|B8HBH8|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
          Length = 371

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 139/352 (39%), Positives = 218/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D +   + ++ L+ +  +P LW +   A+ +     H  + +  +  +
Sbjct: 13  LRATYESIERVTDMEALREDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +E D   + E +  L+ I+  ++  +  +LLSGE D  +A + + 
Sbjct: 73  ASRIDDLEVLVELGQDEGDADSMGEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T  ++    EEAG+KSAT  +K P A+G L 
Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I +++ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTGVVV  Q E+SQ +N+A A  +L+++L  L+  ++E+      + 
Sbjct: 253 VNTTDSAVRLTHIPTGVVVSMQNEKSQLQNRAAAMRVLQSRLLLLKK-EQEDAEKKALAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF+ A +  +
Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363


>gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
 gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
          Length = 326

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +LLE+   ++D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML--DEDDSLKEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     
Sbjct: 59  ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG+++ F+ A L  +
Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323


>gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
 gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
          Length = 371

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 219/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D D     ++ L+ +   P+LW +   A+++  +  H  + +  +  +
Sbjct: 13  LRSTFSAIEDVSDVDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L+ELA  EDD   L E    L  I+  +   +  +LLSGE DS  A + + 
Sbjct: 73  RTRIDDLEVLVELAELEDDADTLDEAEKELVSIQKSLADLEIVTLLSGEFDSRGAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+R +K   ++    EEAG+KSAT  I  P A+G L 
Sbjct: 133 SGAGGVDAADFAEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDTIEIPESEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTGVVV  Q E+SQ +N+A A  +L+++L  L+  ++E+      + 
Sbjct: 253 VNTTDSAVRMTHIPTGVVVSMQNEKSQIQNRAAALRVLQSRLLLLKK-EQEDAQKKEFAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  +   VLDG++DDF+ A +  +
Sbjct: 312 DVKATWGDQMRSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGIRWR 363


>gi|227889611|ref|ZP_04007416.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|268319827|ref|YP_003293483.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
 gi|227849754|gb|EEJ59840.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|262398202|emb|CAX67216.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
          Length = 332

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 150/324 (46%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LD+F+ A L  
Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324


>gi|313891989|ref|ZP_07825590.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
 gi|313119632|gb|EFR42823.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
          Length = 342

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 153/338 (45%), Positives = 219/338 (64%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
               + +   + +  DP  W +  +A+ + ++     +A     ++ +R      LL++A
Sbjct: 2   PRLKETIRSYDIQMSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMA 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +EEDD  +  +    ++ +   +  K+ E LL+ E D+N+A +  HAGAGGTE+QDW  M
Sbjct: 62  IEEDDQGMEGDLKQEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+RMY +WAE   +  E L +  G+EAGIKSA  +IKG  AYG LK E+GVHRLVRISP+
Sbjct: 122 LIRMYIKWAESEGYGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           D+  RRHTSFS++ V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+P
Sbjct: 182 DAAKRRHTSFSAVDVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLP 241

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+V  CQ ERSQ +NK Q   +LRAKL+ELE++K E++    +  +  I WG QIRSYV
Sbjct: 242 TGIVAACQNERSQTQNKEQCLRILRAKLFELEMKKHEQLKKNIQGEQQAIEWGSQIRSYV 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QPY +VKD RT +E  +   V+DGDL+ F++  L  K
Sbjct: 302 FQPYTLVKDNRTGVETGNVQAVMDGDLNPFIEGFLKSK 339


>gi|42562784|ref|NP_176032.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana]
          Length = 482

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 223/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +     LW +   A  + RE   L   +  +   
Sbjct: 122 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 181

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L+LA EE+D  +  ET   L  ++   + K+ E+LLS + D    Y+EV 
Sbjct: 182 ERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQ 241

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++RKF    ++   GE AGIK AT+ + G  AYG+ K
Sbjct: 242 AGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAK 301

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  +EI++SD RI+ +R+ GAGGQ
Sbjct: 302 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQ 361

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      
Sbjct: 362 HANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 421

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 422 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 472


>gi|310659612|ref|YP_003937333.1| prfb [Clostridium sticklandii DSM 519]
 gi|308826390|emb|CBH22428.1| PrfB [Clostridium sticklandii]
          Length = 328

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 153/323 (47%), Positives = 220/323 (68%), Gaps = 2/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W  V +A+  M++ + +++ +     ++  L D  +L ELA  ++D S+ +E  
Sbjct: 1   MSEPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELA--DEDASLEKELH 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ +++  +  +LLSG+ D N+A + +HAG+GG ++QDW  MLLRMY R+A+   
Sbjct: 59  SALNSLEEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSMG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+   L++    EAGIKS TL I+G NAYG+LK E+GVHR+VRISP+D++ +RHTSF+S+
Sbjct: 119 FRVIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIEI+I+ +D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ +RSQ
Sbjct: 179 DVIPELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQRSQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  ML AKL EL+  + ++     +   ++I WG QIRSYV QPY MVKD RTN
Sbjct: 239 HSNKETAMKMLMAKLIELKELEHKDKIEDLQGEYSQISWGSQIRSYVFQPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E      V+DG++  F+ A L 
Sbjct: 299 TEIGHVQSVMDGNIMPFINAYLK 321


>gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group]
          Length = 468

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 155/345 (44%), Positives = 220/345 (63%), Gaps = 1/345 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L+   E P LW + + A  + RE   L   I  + + +
Sbjct: 112 AQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFE 171

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +++ +L LA EEDD  +  ET   L  ++   + K+  +LLSG+ DS   ++EV A
Sbjct: 172 QELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQA 231

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 232 GAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKA 291

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ D S   +I +SD RI+ +R+ G GGQH
Sbjct: 292 EVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQH 351

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            N T+SAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S
Sbjct: 352 ANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQS 411

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 412 LSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456


>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 369

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 229/354 (64%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G   D DN    +  +  +T   + W +  +A+ +M +     +       
Sbjct: 13  ELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72

Query: 62  IQDRLCDNLILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +++ L D   L+++  E ++    L +  ++L  +K E+   + ++ L GE D N+AY+ 
Sbjct: 73  LKEELKDQSDLIDIIEETNEELDSLVDVENSLNMLKKEISSFKIKTELDGEYDRNNAYMV 132

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGG E+ DWA ML+RMYTR+ E+R FK +  ++++ E  GIKSAT+ IKG  AYG+
Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAYGY 192

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI   D RIDTYRASGAGG
Sbjct: 193 LKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL +++ ++  E     +
Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+ A LA K
Sbjct: 313 GNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 366


>gi|148243347|ref|YP_001228504.1| peptide chain release factor 2 [Synechococcus sp. RCC307]
 gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307]
          Length = 349

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 144/338 (42%), Positives = 209/338 (61%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D      R   L      P  W +   A+  MR+   +   +  ++  +  + D    LE
Sbjct: 1   DVPALTARQQDLEQLAAQPDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLE 60

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L   E D ++L+E +  LQ ++L ++  + E LLSG  D   A + ++AGAGGT++QDWA
Sbjct: 61  LYDLEPDDALLEEANGGLQELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQDWA 120

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMYTRWAE R  K    E+ +GEEAGIKS T+ ++G  AYG+L+ E+G HRLVRIS
Sbjct: 121 LMLMRMYTRWAEDRGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRIS 180

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++N +R TSF+ + V P +++ +++EI + D  + T R+ GAGGQ+VN  ++AVRI H
Sbjct: 181 PFNANDKRQTSFAGVEVMPKLEEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+ V+C QERSQ +NK +A  +L++KL  +  ++R            E  WG QIR+
Sbjct: 241 IPTGLAVRCTQERSQLQNKEKAMALLKSKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRN 300

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YV  PYQMVKDLRTN E T    V+DGDLD F+++ L 
Sbjct: 301 YVFHPYQMVKDLRTNEETTDVQGVMDGDLDPFIQSLLR 338


>gi|289523219|ref|ZP_06440073.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503762|gb|EFD24926.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 355

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 167/345 (48%), Positives = 229/345 (66%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G +FD D     +  L  KT  P  W +   A+ + ++  HL + +   ++++    +  
Sbjct: 4   GKVFDVDTLESEIKALIDKTSSPDFWNSSD-AQKVTQKLSHLQDLLGQWQKMKAEWEELE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L EL  E +D  ++ E  D   R++ E+   + E LL  E D ++A L VHAGAGG ++
Sbjct: 63  VLTELLNETEDEELIGEFYDKASRLRKEINSMEMELLLDEEYDESNAILTVHAGAGGLDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE+  ++T+ ++I   EEAGIK AT+LIKG  +YG+LK E+G+HRL
Sbjct: 123 QDWAEMLLRMYLRWAERHNYETKVIDILPDEEAGIKYATILIKGICSYGYLKAEKGIHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS+ RRHTSF+SI V P + D  +IEI   + R++T+RASGAGGQ+VN TDSAV
Sbjct: 183 VRISPFDSSKRRHTSFASIEVIPELPDDADIEIRPEEIRMETFRASGAGGQYVNMTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+ HIPTG+VV CQ ERSQH N+  A  +L+AKLYE   Q+++++ +     K EIGWG 
Sbjct: 243 RLIHIPTGIVVTCQNERSQHMNRQVAMQLLKAKLYERRQQEKQKMLDDLHGEKKEIGWGS 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYVL PY MVKD RT     S   VLDGD+DDF+ A L ++K
Sbjct: 303 QIRSYVLHPYTMVKDHRTGYTSYSVDAVLDGDIDDFVIAYLRMRK 347


>gi|322435983|ref|YP_004218195.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
 gi|321163710|gb|ADW69415.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
          Length = 375

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 231/352 (65%), Gaps = 2/352 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++  L    D     + L+ +  K  DP +W +   ++ LMR+R+ L+  ++   E+ 
Sbjct: 13  RDKVRELREYLDSSRLRRELAIVEEKIADPTVWADAARSQPLMRDRKRLETLLADDAELA 72

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R  D     ELA E +D     +    +  +    +  + +++LSGE D  +A + VH 
Sbjct: 73  RRSDDIEAYFELAKEGEDTE--PDLVREIPALVEYADQLESKTMLSGETDLLNAIVTVHP 130

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA ML+RMY RW E+++FK E  EI DG+EAGIKSAT  I G  A+G L G
Sbjct: 131 GAGGTESQDWAEMLMRMYIRWGERQRFKVEINEIQDGDEAGIKSATFTISGEFAFGLLSG 190

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DS  RRHTSF+S++V P +DD+I I+I   D RIDTYR+ G GGQHV
Sbjct: 191 ETGVHRLVRISPFDSAKRRHTSFASVFVSPEIDDTIVIDIKVEDLRIDTYRSGGKGGQHV 250

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PTG+V  CQ ERSQHKNK +A  M+R+KLYE EL K++      E SK
Sbjct: 251 NTTDSAVRITHLPTGLVTGCQNERSQHKNKERAMKMMRSKLYEYELDKKKAATRKIEDSK 310

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            EIG+G QIRSYVLQPY+M KDLRT +E      VLDGDL+ F++  L +++
Sbjct: 311 LEIGFGSQIRSYVLQPYRMAKDLRTRVEVGDVDKVLDGDLEPFIRGFLRMRR 362


>gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 468

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 155/345 (44%), Positives = 220/345 (63%), Gaps = 1/345 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L+   E P LW + + A  + RE   L   I  + + +
Sbjct: 112 AQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFE 171

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +++ +L LA EEDD  +  ET   L  ++   + K+  +LLSG+ DS   ++EV A
Sbjct: 172 QELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQA 231

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 232 GAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKA 291

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ D S   +I +SD RI+ +R+ G GGQH
Sbjct: 292 EVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQH 351

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            N T+SAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S
Sbjct: 352 ANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQS 411

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 412 LSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456


>gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170]
 gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 322

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 204/309 (66%), Positives = 238/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER HL+ +++  + ++  + D   L+EL   EDD   + E    L     +   ++ E
Sbjct: 1   MRERTHLEQSVAGYRALEREVDDAATLIELGDAEDDAESIAEGERMLHSAAQKARKQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD NDAYLEVHAGAGGTE+QDWA +LLRMYTRWAE    K E LE   GEEAGI
Sbjct: 61  SLLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DS++RRHTSFSSIWVYPVVDD+IEI+I E
Sbjct: 121 KSATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVVDDTIEIDIEE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DCRIDTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH+NK   W+MLRA+LY
Sbjct: 181 KDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKREE     E +KT+IGWG QIRSYVLQPYQM+KD RTN+E +    VL+GDLD 
Sbjct: 241 EHELQKREEKTKALEDTKTDIGWGHQIRSYVLQPYQMIKDTRTNVETSDTQGVLNGDLDQ 300

Query: 346 FMKATLAIK 354
           FM A+LA +
Sbjct: 301 FMAASLAAR 309


>gi|317181479|dbj|BAJ59263.1| peptide chain release factor 2 [Helicobacter pylori F57]
          Length = 381

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+ HL+  +   ++ 
Sbjct: 31  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVHLNRLLETYQKT 90

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 91  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 150

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNTAK--NEE 328

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|289423341|ref|ZP_06425149.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
 gi|289156272|gb|EFD04929.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
          Length = 350

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 165/344 (47%), Positives = 229/344 (66%), Gaps = 4/344 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD D+   R + +N   ED   W++   A  +++E + L + I     +  +L D  +L
Sbjct: 3   LFDLDSLKTRQADINASMEDQGFWEDSDHANRILQENKQLTSKIEDYDSLVGQLEDISVL 62

Query: 73  LELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +E+A E    E+D +I  +    +  +  ++     E L SGE DSN+A L +++G GG 
Sbjct: 63  IEMAEETSDSEEDKTIEDQLVAYISDVNEKIVNTTMELLFSGEYDSNNAILSINSGTGGL 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDWA MLLRMY RW+E R  K + L+I    EAGIK+A+L++ G NAYG+LK E+GVH
Sbjct: 123 DAQDWAQMLLRMYIRWSEGRGLKVKLLDIISDPEAGIKTASLMVSGVNAYGYLKSEKGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS+ +RHTSF+S+ V P ++D  +I I+ +D +IDTYR+SGAGGQHVNTTDS
Sbjct: 183 RLVRISPFDSSGKRHTSFASVDVLPEIEDDSDININPNDLKIDTYRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQ  NK  A  ML +KL +++ ++ +E     +   T+I W
Sbjct: 243 AVRITHLPTGIVVQCQNERSQRINKDVAMKMLISKLIQIKEEENKEKIEDLQGKYTQISW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYV QPY++VKD RTN E T+   V+DG LDDFM   L 
Sbjct: 303 GSQIRSYVFQPYKLVKDHRTNKENTNVDAVMDGSLDDFMFEYLK 346


>gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
 gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
          Length = 364

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 146/353 (41%), Positives = 214/353 (60%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L    G    +   +RL  L+     P  W +   A+   +    + + +   + 
Sbjct: 11  ELAERLAAARGYLHIEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D    LEL   E+D +   E  +    +   ++  + ES  +  +D+ DA + V
Sbjct: 71  ACATLEDARAALELI--EEDDAFAVEFDELRAGLSSALDRMEVESWFTDPSDACDAIVSV 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + G+GG E+QDW +ML RMY R+AEK+ +K + L++  GE  G+  A + I+G NA+G L
Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKGWKVKLLDVVPGEVIGLDRAVVQIEGKNAFGML 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP D   RR T+F+ + V PVV+D IE+EI+ SD R+D YR+SG GGQ
Sbjct: 189 RSEHGVHRLVRISPTDDKKRRQTTFAGVEVLPVVEDDIEVEINPSDVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A+ +LRAKLYELE QKRE+  +    
Sbjct: 249 CVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKESAFKVLRAKLYELERQKREDEMDALRG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +  +G QIR+YVL PYQ+VKD+R+ +E  +   VLDG +D+F+      +
Sbjct: 309 EKRDNSFGSQIRNYVLYPYQLVKDVRSGVETGNVDAVLDGQIDEFVIGYHRWR 361


>gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
 gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
          Length = 374

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 145/357 (40%), Positives = 217/357 (60%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D      R++ L+ +   P LW +   A+++     H    +  +++
Sbjct: 11  RLRHTHASIEAVTDPQALRARIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVED 70

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  R+ D   ++E+A EE   D   +L E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGSRIDDLEAMVEMAGEEEGDDAAELLAEAESDLASISKDLSELEIRTLLSGEYDQRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY RWAE+  + T+ L+    EEAG+KS T  +  P AY
Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IE+ E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEVPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+  + E+    
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSYVL PYQMVKDLRT+ E  +P  V DGD+D F+ A +  +K
Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
 gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
          Length = 322

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 208/310 (67%), Positives = 246/310 (79%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRER  L+ AI   + ++  L DNL L+E+   E D +I+ E    L+  +      + 
Sbjct: 1   MMRERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAEAEI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E+LLSGEAD+ND Y+E+HAGAGGTESQDWA MLLRMYTRWAE++ +K E +E HDGEEAG
Sbjct: 61  ETLLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+L+KG NA+GWLK E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD I+IE+S
Sbjct: 121 IKSATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDKIDIEVS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 EADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE ELQKRE+ A    S KT+IGWG QIRSYVLQPYQMVKDLRT +E +    VL GDLD
Sbjct: 241 YEAELQKREDAAAAQASGKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTDGVLGGDLD 300

Query: 345 DFMKATLAIK 354
            FM A LA +
Sbjct: 301 PFMAAALAAR 310


>gi|268316864|ref|YP_003290583.1| LigA [Rhodothermus marinus DSM 4252]
 gi|262334398|gb|ACY48195.1| LigA [Rhodothermus marinus DSM 4252]
          Length = 371

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 153/356 (42%), Positives = 225/356 (63%), Gaps = 7/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ LG   D     ++++ LN +   P  W N   A+ + ++    ++ ++  +++
Sbjct: 8   LLERVDTLGRFLDIPGRKEKIAKLNEERLAPGFWDNPERAREVEKQIAEEESWVAAWEQL 67

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  D   LLEL  EE D ++ +E +  + R++ +++  +  SLL+   D  +A L +H
Sbjct: 68  RRQADDVQTLLELQQEEPDANLEEEIAREVARLEQQLDELELRSLLTDPDDHRNAILTIH 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMYTRW E+  +  E LE   G+ AGIKSATL I GP AYG+LK
Sbjct: 128 PGAGGTESQDWAEMLLRMYTRWGERHGYDVELLEYQAGDVAGIKSATLRIAGPYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+D++ RRHTSF+S++VYP +DDSIE++I   +  + T+R+ G GGQ+
Sbjct: 188 GESGVHRLVRISPFDASGRRHTSFASVFVYPEIDDSIEVDIRPDEIEMQTFRSGGKGGQN 247

Query: 243 VNTTDSAVRITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           VN  ++ VR+             VV +C +ERSQ +N+ +A  ML++++Y+LE + RE  
Sbjct: 248 VNKVETGVRLIWHGKLSNGEEARVVAECTEERSQLQNRQRALTMLKSRIYQLEREIREAE 307

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               ES K +I WG QIRSYV QPY MV D RT  + T    V+DGDLD F++A L
Sbjct: 308 KRKRESQKKKIEWGSQIRSYVFQPYTMVNDHRTETKVTDVQAVMDGDLDPFIRAYL 363


>gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
          Length = 376

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 12  EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQSQLKRLSS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EEDD   L E    ++ I+ ++   + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGQEEDDADTLAEARSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363


>gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271]
 gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga
           ochracea DSM 7271]
          Length = 367

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 233/351 (66%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L   FD D     +S    KT  P  W N  EA+ +MRE +     +   +E 
Sbjct: 10  LVNRLGALRRYFDVDAKRIEISNEEEKTFAPDFWDNAKEAEKVMRELRTKKKWVEDYEEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   D  +LL+   E +  +  ++      +    +E  +F ++LS E D+  A L++ 
Sbjct: 70  ENLTSDIEVLLDFFKEGE--ATAEDVDHQYTQALHAIEALEFRNMLSDEGDTMSAVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AG+K+ T+ I+G  A+G+LK
Sbjct: 128 AGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGVKTVTIEIEGEYAFGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D   +T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADITFETMRSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LYE+EL+KR+   +  E+ 
Sbjct: 248 VNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RTN E T    V++G+LD+F+KA L +
Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLKAYLML 358


>gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1]
 gi|123339715|sp|Q0S2Q6|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1]
          Length = 368

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 149/353 (42%), Positives = 219/353 (62%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H    +  ++E
Sbjct: 11  ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA +E     + +       ++ ++   + +++LSGE D  DA + +
Sbjct: 71  LRTRLDDMPVLYELAEDEG-ADAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+++E+D R+D YR+SG GGQ
Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E++ ++     +  + 
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEVKRKEERAEMDALKG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F+++ +  +
Sbjct: 310 DGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLESGIRWR 361


>gi|300722130|ref|YP_003711413.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
 gi|297628630|emb|CBJ89208.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
          Length = 310

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 171/309 (55%), Positives = 221/309 (71%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L++ +  I ++   L D   LLELA+E DD     E    L +++ ++   +F
Sbjct: 1   MGKERSSLESIVETIDQLDQGLEDVNGLLELAVEADDEETFNEAVAELDQLEEKLGLLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+
Sbjct: 121 LKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHMPTGIVTQCQTDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD
Sbjct: 241 YELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 KFIEASLKA 308


>gi|256826989|ref|YP_003150948.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
 gi|256583132|gb|ACU94266.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
          Length = 364

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 147/350 (42%), Positives = 203/350 (58%), Gaps = 2/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +L         D   QRL+ L+ +T  P  W ++  A+ + +E   +   +   +   
Sbjct: 11  AERLTEAHSFLHIDARKQRLAELDQQTAQPGFWDDIDRAQAVSKEASDIRTLLDTYEHAH 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D    L+LA   DD     E       +   ++  + ES      D  D  + ++ 
Sbjct: 71  TLLDDWRCALDLAQ--DDPDFATEAQKAADELSRLLDDFEIESWFGNRFDEGDCIVTINP 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GG E+QDW +ML  MYT++AE R +K   L+   GE  GI+ A+  I+G  AYG L+ 
Sbjct: 129 GSGGLEAQDWCDMLFHMYTKYAENRGWKVRVLDAPLGEVIGIEHASFQIEGRFAYGMLRS 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP D   RRHT+F+S+ V PV+ D IE+ ++ +D R+D YRASG GGQ V
Sbjct: 189 EIGVHRLVRISPTDDKKRRHTTFASVEVMPVLPDDIEVNLNPADVRVDVYRASGPGGQCV 248

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIPTG VV CQ ++SQ +NK  A+ +LRA+L+ELE +KR+E        K
Sbjct: 249 NTTDSAVRLTHIPTGTVVTCQNQKSQLQNKEAAFRILRARLFELEERKRQEEIEALRGEK 308

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            E  +G QIR+YVL PYQMVKDLR+ IE  +   VL GDLD F+      
Sbjct: 309 RENSFGSQIRNYVLYPYQMVKDLRSGIETGNVDAVLGGDLDQFVIGYHRW 358


>gi|124515298|gb|EAY56808.1| Peptide chain release factor 2 [Leptospirillum rubarum]
          Length = 370

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 174/356 (48%), Positives = 240/356 (67%), Gaps = 5/356 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M+ +R     GG+FD D     L  ++ +++ P  W++   A+ ++RE+  L+  +S I+
Sbjct: 1   MEKNRGFPRSGGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQ 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+    D   L ELA    D   L E S  +      V+  + E +LS     N A+LE
Sbjct: 61  GIEKEDADIRALFELAS---DPDFLAELSRRVPEFSESVKAFELEEILSDAKSDNPAFLE 117

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA MLLRMY RWAE+     E ++I  GEEAGIKSAT+L++G +A+G+
Sbjct: 118 IHPGAGGTESQDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGY 177

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G+HRLVRISP+D+N RRHTSF+S++VYP ++D I +EI + D RIDT+RAS AGG
Sbjct: 178 LMSESGIHRLVRISPFDANKRRHTSFTSVFVYPELEDDIPVEIRDEDIRIDTFRASSAGG 237

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-- 298
           QHVN T SA+R+TH+PTG+V+  Q ERSQ +N+  A+ +LRAKLYELE ++++E  +   
Sbjct: 238 QHVNKTSSAIRLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKIS 297

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G  +K EIGWG QIRSYVLQPYQ++KD RT +E    S+VLDGDLD F++  L  +
Sbjct: 298 GAQNKKEIGWGHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353


>gi|326771885|ref|ZP_08231170.1| peptide chain release factor 2 [Actinomyces viscosus C505]
 gi|326638018|gb|EGE38919.1| peptide chain release factor 2 [Actinomyces viscosus C505]
          Length = 373

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 147/357 (41%), Positives = 217/357 (60%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE+      IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAEMDLAAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+  +  + L     EEAG+KS T  +  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+  + E+    
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
 gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
          Length = 313

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 161/309 (52%), Positives = 219/309 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L + +  + ++     D  +L+E+A +E+D S+L E    L   +   E  + +
Sbjct: 1   MKELKSLKDFLEKVSQLTTSYEDIGVLIEMAYDENDESLLPEIESELTAFQQGYEEIRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D ++A + +HAGAGGTES DWANML RMYTRWAE++ F  E L+  DG+ AG+
Sbjct: 61  TLLSGEYDKDNAIVTLHAGAGGTESCDWANMLYRMYTRWAERKGFSVEVLDFLDGDVAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IE+++
Sbjct: 121 KAVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDDIDIELND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITHIPTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVVQCQNERSQHNNKEKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY +VKD RTN+E  + S VLDG++D 
Sbjct: 241 LLKEQEQAEKVSDIRGEIKEIGFGNQIRSYVMQPYTLVKDHRTNVESGNVSSVLDGNIDL 300

Query: 346 FMKATLAIK 354
           FM A L  +
Sbjct: 301 FMNAYLKAQ 309


>gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
 gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084775|gb|EDN83820.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
          Length = 376

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 209/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D        L  K  +P LW +   A+ +  +   + + +  +  
Sbjct: 12  EARAKYESISKALDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQSQLKRLAS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L E    ++ I+ +++  + ++LL GE D   A + +
Sbjct: 72  ADQRIEDVETLVELGQEEEDADTLAEAKAEVESIQKDLDDMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D+F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGIRWR 363


>gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu]
 gi|238687385|sp|B0B832|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           434/Bu]
          Length = 368

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L       D +     L  L  +      W +V  A  +      L   +S   E+
Sbjct: 12  LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++++      LE      D  + +E        + ++   +   LLSGE D N  +L ++
Sbjct: 72  KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  M+LRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQH
Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +
Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|220905200|ref|YP_002480512.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869499|gb|ACL49834.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 370

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 159/349 (45%), Positives = 222/349 (63%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++   L G  D   + +RL  + T+   P  W        L++E++ L++ ++ + ++
Sbjct: 14  LAQRFASLWGRLDVAASEKRLQAIETEISRPGAWDKPEALTPLLQEKRRLEDEVARLNKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D    L LA E +D   L+  +   + +   ++  +   LLS E DS DA LE+H
Sbjct: 74  KTCHDDMNEWLALAAESEDPEALESLAQQQKDLAALLDETELVMLLSAEEDSQDAILEIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMYTRWA    +K E L+   G+EAG+KS TL + GP+A+G+LK
Sbjct: 134 PGAGGTESQDWAEMLLRMYTRWAADHDYKVEELDFLPGDEAGVKSVTLRVGGPHAFGFLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRL+RISP+DS+ RRHTSF+S+ V P   D IE+++ E+D R+D +R+SG GGQ 
Sbjct: 194 SERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIELDLKEADLRVDIFRSSGPGGQS 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITHIP+G+  QCQ E+SQH NK  A  +LRA+LY +EL+KRE       + 
Sbjct: 254 VNTTSSAVRITHIPSGISAQCQNEKSQHHNKETALRVLRARLYNMELEKREAARQAQYAG 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  I +G QIR+Y LQPY++VKD RT  E      VLDG +D F    L
Sbjct: 314 KDAIAFGSQIRTYTLQPYRLVKDHRTGTEVGDVDAVLDGQIDAFQHDYL 362


>gi|329667680|gb|AEB93628.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii DPC
           6026]
          Length = 332

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 150/324 (46%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LD+F+ A L  
Sbjct: 301 FESSDVNGVMDGKLDNFIYAYLQW 324


>gi|317179974|dbj|BAJ57760.1| peptide chain release factor 2 [Helicobacter pylori F32]
          Length = 381

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 31  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 91  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 150

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 328

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900]
 gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
 gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
 gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
          Length = 310

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 170/308 (55%), Positives = 225/308 (73%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 RFIEASLK 307


>gi|302334951|ref|YP_003800158.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
 gi|301318791|gb|ADK67278.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
          Length = 370

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R+L+ +      D   + ++ L  ++  P  W +   A   M E       +  I++ 
Sbjct: 11  LARRLDEVESYLHIDERRRVVAELEERSARPGFWDDADAASRSMTELTRAKEDVQGIEDA 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D    LEL LE  D  +L E +     ++ E+   +  S  + + D  DA + V 
Sbjct: 71  RTRLGDASAALELGLETGDGDLLDEAARICGALEDELGELELSSWFADDLDHGDAIVTVT 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+QDW +ML +MY R+ ++R +K    +    E  GI  AT  + G NAYG L+
Sbjct: 131 PGQGGLEAQDWCDMLFKMYLRYCDRRGWKVTVNDAPAAEAIGIDRATFTVSGKNAYGMLR 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP D   RR T+F+ + V PV+ D +E++I   D RID Y ASG GGQ 
Sbjct: 191 AEQGVHRLVRISPTDDKKRRQTTFAGVEVLPVLPDDVEVDIDPGDLRIDVYHASGHGGQG 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG VV CQ ERSQ +NKA A  +LR++LYELEL KRE   +     
Sbjct: 251 VNTTDSAVRITHLPTGTVVTCQNERSQIQNKAIAMGILRSRLYELELAKREAEIDELRGP 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
           K EIG+G QIRSYVL PYQ+VKDLRT +E  +   VL DGDLD F+      
Sbjct: 311 KHEIGFGNQIRSYVLYPYQLVKDLRTGVETGNVESVLDDGDLDKFIVGYHRW 362


>gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|238687484|sp|B0BC97|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 368

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L       D +     L  L  +      W +V  A  +      L   +S   E+
Sbjct: 12  LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++++      LE      D  + +E        + ++   +   LLSGE D N  +L ++
Sbjct: 72  KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  M+LRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQH
Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +
Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
 gi|166977372|sp|A8EWG5|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
          Length = 365

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 162/342 (47%), Positives = 224/342 (65%), Gaps = 2/342 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           + G+   D   +RL  +  +      W +V  A  +  E+  +   ++   +  D L   
Sbjct: 20  IKGILKPDILNKRLEEIKNEEASQDFWNDVENATKIGIEKNRILGKLNKFNKAFDSLTGT 79

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A  E D   L+   +    ++  ++  +   +LS   DS++A + +H GAGGTE
Sbjct: 80  NELYEMATAEKDDETLEMLYEEASDLENLIKSTEISVMLSNPDDSSNAIVSIHPGAGGTE 139

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWA++L RMY RWAE+  FK E L+   G+EAGIK  + +IKG NAYG++K E G+HR
Sbjct: 140 SQDWASILYRMYLRWAERNDFKVELLDYQAGDEAGIKDVSFIIKGENAYGYMKAENGIHR 199

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DSN++RHTSFSS+ V P +DD+I I I + D RIDTYRASGAGGQHVN T+SA
Sbjct: 200 LVRISPFDSNAKRHTSFSSVMVSPEIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESA 259

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITHIPTG+VVQCQ +RSQHKNK  A+ ML+++LYE EL+K+   A+     K++ GWG
Sbjct: 260 IRITHIPTGIVVQCQNDRSQHKNKDSAFKMLKSRLYEYELEKQR--ASKDGIEKSDNGWG 317

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIRSYVLQPYQ VKD R+NI  ++   +LDGD+   ++  L
Sbjct: 318 HQIRSYVLQPYQQVKDSRSNIGYSNVDAILDGDITKMIEDVL 359


>gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4]
 gi|254790919|sp|C1B1L3|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4]
          Length = 368

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 150/353 (42%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H    +  ++E
Sbjct: 11  ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA +E   +I    ++    ++ ++   + +++LSGE D  DA + +
Sbjct: 71  LRTRLDDMPVLYELAEDEGAEAIADADAER-HSLREDIAAMEVKTMLSGEYDERDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+++E+D R+D YR+SG GGQ
Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E++ ++     +  + 
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEVKRKEERAEMDALKG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F+++ +  +
Sbjct: 310 DGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSSVLDGDIDGFLESGIRWR 361


>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 379

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 151/359 (42%), Positives = 218/359 (60%), Gaps = 8/359 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D+   ++  L  +  DP LW +   A+ +  +  H+   I  +  +
Sbjct: 12  LNSTLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTL 71

Query: 63  QDRLCDNLILLELALEEDDC-------SILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           + R+ D  ++ ELA +  +           +      + ++ E+E  + +++LSGE D  
Sbjct: 72  RQRVDDMPVMYELADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDER 131

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + + + AGG ++ DWA ML+RMYTRW E+   K +  +I   EEAGIKSAT ++ G 
Sbjct: 132 EAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGD 191

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+
Sbjct: 192 YMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRS 251

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L AKL + + ++ +  
Sbjct: 252 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLDRKREEEQAE 311

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            N  +       WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +  +
Sbjct: 312 MNALKGDG-SNSWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369


>gi|283955061|ref|ZP_06372564.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793428|gb|EFC32194.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 366

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 232/353 (65%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   +++ +++  +   +   LLSGE DS +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDVPKLEDTITSLEISMLLSGENDSKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN G   
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELLKQQDNANAG--E 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|223940442|ref|ZP_03632294.1| peptide chain release factor 2 [bacterium Ellin514]
 gi|223890887|gb|EEF57396.1| peptide chain release factor 2 [bacterium Ellin514]
          Length = 384

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 216/354 (61%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R     GG FD  N  +RL  L++       W N  +A+ L+ E   L   +  + + 
Sbjct: 16  LARNWPTYGGFFDVANVQKRLGELDSLMAGESFWSNRDQAQKLIDESNSLRKKVEPLLKA 75

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + +L D  +++ELA  E      +   +    L     E+E  + +  L+G  D N+  L
Sbjct: 76  EKQLEDYKVMIELAEAEPAAEQEKYQNDVDRELVVFNKELENLELKVFLNGPHDKNNCIL 135

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGTES DWANMLLRMY RWAE R ++ E  +   GE AGIKSATLLI G NAYG
Sbjct: 136 SINAGAGGTESCDWANMLLRMYQRWAELRGWQVEVTDALPGETAGIKSATLLISGENAYG 195

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           + K E+GVHRLVRISP+DSN RRHTSF+S+     +++  EI I  ++  +DT+R+ G G
Sbjct: 196 FCKAERGVHRLVRISPFDSNKRRHTSFASVDAIAEIEEEGEIAIPPNEFHVDTFRSGGKG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVRITHIPTG+VV  Q +RSQH+N+A A  +L ++++   L  +++     
Sbjct: 256 GQNVNKVETAVRITHIPTGLVVASQTQRSQHQNRATAMKLLLSRIFAQRLDAQKQEMERF 315

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              K  + WG QIRSYV QPY+MVKDLRT +E +    V+DGDLD ++   L  
Sbjct: 316 YGEKGSVSWGNQIRSYVFQPYRMVKDLRTGVETSDVQGVMDGDLDPYVNGWLRA 369


>gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 367

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 230/354 (64%), Gaps = 8/354 (2%)

Query: 2   KLSRQLN----CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS 57
           +L + LN     +  +    +   R+  +    +    W++  +A  L +E++  +  + 
Sbjct: 8   ELLKTLNIKCENIKKIMQPSSLKNRILEITELEQTKDFWEDAKKAGELQKEKKRCERQLE 67

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
                +  L D + L EL+   DD   L+      + ++  ++  + E +LS   DSN+A
Sbjct: 68  KYNNAKSALDDAIELFELS--SDDLESLEVLFAESEELESIIKNAEIEVMLSDPLDSNNA 125

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
              +  GAGGTESQDWA+ML RMY RWAE++ FK E L+  +G+EAGIK A+ +IKG NA
Sbjct: 126 IFTITPGAGGTESQDWASMLYRMYLRWAERKDFKVELLDYQEGDEAGIKDASFIIKGENA 185

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+ K E GVHRLVRISP+D+N++RHTSFSS+ V P +DD I IEI E D  IDTYRASG
Sbjct: 186 YGYAKAENGVHRLVRISPFDANAKRHTSFSSVQVSPEIDDEINIEIDEKDLEIDTYRASG 245

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN T+SAVRITH P+G+VVQCQ +RSQHKNKA A  ML++KLYELE  KRE  +N
Sbjct: 246 AGGQHVNKTESAVRITHKPSGIVVQCQNDRSQHKNKASALKMLKSKLYELERLKREAESN 305

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + K + GWG QIRSYVL PYQ VKDLR+N+  T+   +LDGD+D  ++  L
Sbjct: 306 --HTDKGDNGWGHQIRSYVLTPYQQVKDLRSNLAYTNVDAILDGDIDTILEGVL 357


>gi|217034219|ref|ZP_03439638.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
 gi|216943387|gb|EEC22846.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
          Length = 381

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 31  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + + +LSGE D+++A + + 
Sbjct: 91  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIKIMLSGENDASNAIITIQ 150

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 328

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|119358306|ref|YP_912950.1| peptide chain release factor 2 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355655|gb|ABL66526.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 363

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD D   +++  L   T DP  W +  EA   ++E     +      +++    
Sbjct: 16  TSYGGIFDVDERKEKIDDLEKITADPGFWNDQQEANRTLKELSEHKSWTGAFDKLEAAAK 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            +   L +A E  D S   E   ++  I+  +   +F ++LSG+ D  +A + +HAGAGG
Sbjct: 76  TSGEELTIADELQDESFADELIASIAAIESGIAAIEFRNMLSGKDDPGNAIITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I 
Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREIEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGDLD FM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDTFMEKYLS 359


>gi|283956828|ref|ZP_06374302.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791689|gb|EFC30484.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 365

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIKTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
 gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
          Length = 320

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 165/317 (52%), Positives = 221/317 (69%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L   +  I +++  + D   LLELA+E  D     E    L+ +
Sbjct: 2   WNEPERAQALGKERSSLQAVVETINQLEQGVDDVEGLLELAIEAQDQETFDEVLPELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SG+ D+   Y+++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +
Sbjct: 62  EAKLAQLEFRRMFSGDHDAAHCYIDLQAGSGGTEAQDWTSMLLRMYLRWADDKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP +
Sbjct: 122 EVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D++I ++I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 325

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 220/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +   A+ + +E + + + I  ++ +Q +L D  +L E+ +++DD     E  
Sbjct: 1   MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEM-MDDDDEESAYEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N++ I+ E++    E LLSGE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 60  NNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKN 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +I+I   D ++DTYRASGAGGQH+N TDSAVRITHIPTGVVVQCQ ERSQ
Sbjct: 180 EVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             NK  A  ML+AKL EL+ +  +E          ++GWG QIRSYV  PY +VKD RTN
Sbjct: 240 FSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E ++ + V+DGDLD F+ + L   K
Sbjct: 300 VEVSNVTAVMDGDLDLFINSYLKSSK 325


>gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 374

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D +     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDINRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|169832218|ref|YP_001718200.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639062|gb|ACA60568.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 330

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 208/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  WQ    A+ + R    L   +     ++    D  +LLEL  E +D    +E  
Sbjct: 1   METPDFWQQQERAQEVTRRLAGLRQQVEVFDTLRRDFEDAAVLLELGEEIEDPDTAREVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  +   V   + E LLSG  D  +A L +HAGAGG E+QDW  ML RMY RWAEKR 
Sbjct: 61  RSLAELGRRVAALELELLLSGPYDEANAILSLHAGAGGLEAQDWVEMLFRMYLRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+I   +EAG+K+ T L+ GP AYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 YAVEVLDILPDDEAGLKNVTFLVSGPMAYGYLRAEKGVHRLVRISPFDAGGRRHTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P V ++  I+I+  D RIDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVLPEVAENTAIDINPEDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  +L+A+L +LEL++REE        + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 IANRNAAMKLLKARLLDLELRRREEEIAALRGEQPDIAWGSQIRSYVFHPYSMVKDHRTK 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            EK +   V+DG++D+F++A L  K
Sbjct: 301 FEKGNVDAVMDGEIDEFIQAYLVWK 325


>gi|313906145|ref|ZP_07839494.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
 gi|313469032|gb|EFR64385.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
          Length = 332

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W N  EA+   +E   L N      ++     D  +++E+  EEDD SI+ E  
Sbjct: 1   MEEPDFWNNPDEAQKQTKELGDLKNDRDTYAKLVSTKEDIEMMIEMGEEEDDESIVPEVR 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      ++  + ++LLS E D N+A + ++AGAGGTE+ DW  ML RMYTRWAE++ 
Sbjct: 61  EMLDDFIETLDGVRIKTLLSEEYDVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++ +G+EAGIKS    + G NAYG LK E GVHRLVRISP+++ ++R TSF S 
Sbjct: 121 FAIEELDMQEGDEAGIKSVMFQVNGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D I+IE+ + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ
Sbjct: 181 DVMPELNDDIDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  +L+AKLY LE +K+ E A       T+I WG QIRSYVLQPY MVKDLRTN
Sbjct: 241 FQNKDKAMQVLKAKLYMLEQEKQAEKAAGIRGEVTDIAWGHQIRSYVLQPYTMVKDLRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            EK   S VLDGDLD F+ A L  +
Sbjct: 301 AEKAQASAVLDGDLDPFINAYLKWQ 325


>gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13]
 gi|7388051|sp|O84465|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|123606855|sp|Q3KLN9|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           A/HAR-13]
          Length = 369

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 212/342 (61%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             LFD +     L  L  +      W +V+ A  +      L   +S   E+++++    
Sbjct: 21  RSLFDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 80

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LE      D  + +E        + ++   +   LLSGE D N  +L ++AGAGGTES
Sbjct: 81  FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 140

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  MLLRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRL
Sbjct: 141 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 200

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 201 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 260

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG 
Sbjct: 261 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 320

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 321 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 362


>gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
 gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
          Length = 322

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 191/309 (61%), Positives = 242/309 (78%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  LD +++  + ++  L D+L L+E+   E+D +++ +    L  ++      Q E
Sbjct: 1   MRERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANKLQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND ++EV+AGAGGTE+QDWA ML+RMYTRWAE+  +KTE L+   GEEAGI
Sbjct: 61  SLLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ IKG NAYGWLK E GVHRLVRISP+DS +RR TSF+++ + PV+DD I+IEI+E
Sbjct: 121 KSATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVIDDKIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DCRIDTYRASGAGGQH+N TDSAVRITHIPT +VV CQQERSQHKN+A+AW+MLRA+LY
Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+ RE+ A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E +    VLDG LD 
Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGALDP 300

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 301 FLEAALASR 309


>gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
 gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
          Length = 310

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 176/306 (57%), Positives = 223/306 (72%), Gaps = 3/306 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L        +++D L D L++ EL  E ++     E  D ++    E+E  + E
Sbjct: 1   MKELKILRQKKGEYDKLKDNLDDILVMFELIDEGEEMD---ELPDTIEAFGKELEKFKLE 57

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DSN+A + +H GAGGTESQDWA MLLRMYTRWAE++ FK ++L++  G+ AGI
Sbjct: 58  TLLSGEYDSNNAIISLHPGAGGTESQDWAEMLLRMYTRWAERKGFKVKSLDLQPGDVAGI 117

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLI+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ 
Sbjct: 118 KSATLLIEGINAYGYLKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINP 177

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRASGAGGQHVN T SA+RITHIPTGVVVQCQ ERSQH+NK  A NML+ KL 
Sbjct: 178 DDIRVDTYRASGAGGQHVNKTSSAIRITHIPTGVVVQCQNERSQHQNKEVAMNMLKGKLV 237

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+  Q+++E  +      ++I WG QIRSYV  PY MVKD RTN+E  +   V+DGDLD 
Sbjct: 238 EIMEQEQKEKLDDVVGDYSQIAWGSQIRSYVFHPYNMVKDHRTNVEVGNIQSVMDGDLDQ 297

Query: 346 FMKATL 351
           FM A L
Sbjct: 298 FMNAYL 303


>gi|86152591|ref|ZP_01070796.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843476|gb|EAQ60686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 365

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASGLFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|224282580|ref|ZP_03645902.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum
           PRL2010]
 gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium bifidum PRL2010]
 gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 375

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 206/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D +    +++ L T+   P LW +   A+ +          +  + E
Sbjct: 12  EARSKYESIAKALDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQAQLKRLNE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+ELA EE D   L E    +  I  E++  + ++LL GE D   A + +
Sbjct: 72  ANRRIEDVETLVELAQEEADADSLSEAQSEIGSIAQELDDMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGIRWR 363


>gi|7404432|sp|O51101|RF2_BORBU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 359

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 156/360 (43%), Positives = 226/360 (62%), Gaps = 12/360 (3%)

Query: 3   LSRQLNCL--------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +  ++N L          LFD +    ++     +    + W +   A+ +++ +  L N
Sbjct: 1   MKEKINTLLKHAEDIWRKLFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKN 60

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            I   +E+ +++ D   L E+A  E D + L+        ++ + +     S    E D+
Sbjct: 61  KIDPWEELINKIKDLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDA 117

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+A+L +H+GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG
Sbjct: 118 NNAFLTIHSGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKG 176

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYG LK E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYR
Sbjct: 177 EYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYR 236

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E
Sbjct: 237 ASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDE 296

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                + +K EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 297 KNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 356


>gi|284040585|ref|YP_003390515.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
 gi|283819878|gb|ADB41716.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
          Length = 358

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 228/349 (65%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D+DN  ++L+ L  +T  P  W +   A+ +M++ + L    +  +++
Sbjct: 9   LRARVEALRGYLDYDNKKEQLAELEQQTFQPEFWTDAARAEGVMKQVRGLKGWTTGYEKL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E     D      +     +++   +E  + + +L  E D   A LE++
Sbjct: 69  NSQFGDLETLFEFYEAGDVTEEEVDEEG--RKVTTTLEELELKKMLGNEEDQLSAVLEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML RMY RWAEK  +  + ++  +G+ AGIKSAT+ + GP AYG+LK
Sbjct: 127 AGAGGTESQDWADMLYRMYMRWAEKHGYGLKQVDYQEGDTAGIKSATIEVDGPLAYGFLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++ YP++DD+I IE++ +D   DT+R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLIDDTINIEVNPADIDWDTFRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G++++CQQERSQ +NK  A  +L++KLYE+E+QKR       E+S
Sbjct: 247 VNKVETAVRLKHKPSGLIIECQQERSQLQNKEVAIRLLKSKLYEIEVQKRNAARAEVEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYVL   + VKD RT  + ++   VLDGDLD F+KA L
Sbjct: 307 KQKIEWGSQIRSYVLDD-RRVKDHRTGYQTSNTEAVLDGDLDPFIKAFL 354


>gi|224419024|ref|ZP_03657030.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
          Length = 363

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 232/350 (66%), Gaps = 4/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  +        R+  + +  +    W++  +A    +E++     +   KE
Sbjct: 12  ELEIKRQNIEKIMQPSQLQSRIEEIESLEQQKEFWEDSKKAGEYQKEKKRCLRQLEKYKE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D   L EL+   DD   L E  +    ++ +++  + E +LSGE DSN+A   +
Sbjct: 72  ASLALSDAKELFELS--SDDEETLNELFNEAPMLEEQIKKAEIEVMLSGELDSNNAIFTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTESQDWA+ML RMY RWAE+  FK E L+  +G+EAGIK A+ +IKG NAYG+ 
Sbjct: 130 TPGAGGTESQDWASMLYRMYLRWAERCGFKVELLDYQEGDEAGIKDASFIIKGENAYGYT 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD+I IEI E D RIDTYRASGAGGQ
Sbjct: 190 KVENGIHRLVRISPFDSNAKRHTSFASVQVTPEIDDNISIEIEEKDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SA+RITHIPTG+VVQCQ +RSQHKNKA A  ML++KLYELE QKR E   I   
Sbjct: 250 HINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKMLKSKLYELEQQKRNE--QIAND 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K+EIGWG QIRSYVL PYQ VKDLR+NI  ++   +LDGD+D  ++  L
Sbjct: 308 DKSEIGWGHQIRSYVLAPYQQVKDLRSNIAYSNVEAILDGDIDSILEGVL 357


>gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
 gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
          Length = 325

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 148/323 (45%), Positives = 215/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+  EEDD  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+  GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
          Length = 383

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     +L   +   +E+
Sbjct: 26  LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKITSRLSYLQGQLRKAEEL 85

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  EDD     E    L  ++  V+  +  +LLSGE DS +A + + 
Sbjct: 86  RSRIDDLEVLFELADAEDDADARAEAVAELDSVRKAVDEMEVRTLLSGEYDSREALVNIR 145

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  +    EEAGIKS T  ++ P AYG L 
Sbjct: 146 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEVYDTSYAEEAGIKSTTFAVQIPYAYGTLS 205

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ RID YR+SG GGQ 
Sbjct: 206 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQG 265

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 266 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 325

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG+LD F++A +  +K
Sbjct: 326 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 377


>gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107]
 gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107]
          Length = 356

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 203/342 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  + + +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLKQLADWRSAIDDAK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L  ++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYELEADEDMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    +    EI +GEEAGIKSAT+ ++G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ I V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV  PYQMVKDLRT  E      V+DG LD F+ A+L 
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLR 344


>gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
 gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
          Length = 310

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 170/308 (55%), Positives = 222/308 (72%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N ++ +  +  +L D   LL+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVLNVLDRLSTQLEDAQALLDLAVEADDESLLEDVQAELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + +   D N  YLE+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AG
Sbjct: 61  RRMFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRMYLRWIERHGFKAEVMEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEIEI+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+ KR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 KFIEASLK 307


>gi|332673011|gb|AEE69828.1| peptide chain release factor RF2 [Helicobacter pylori 83]
          Length = 385

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 35  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 95  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 332

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384


>gi|315586172|gb|ADU40553.1| peptide chain release factor RF2 [Helicobacter pylori 35A]
          Length = 385

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 35  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 95  KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 332

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384


>gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281974|sp|Q04V47|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122283090|sp|Q04YD0|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 367

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 165/351 (47%), Positives = 228/351 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L         L + +    RL  LN K+EDP LW N  EA+++ +++  L+  ++    
Sbjct: 15  ELQENFLNRWKLLNLEQDKDRLKALNEKSEDPDLWNNPEEARIVSQKKNELEKKLTPWFT 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + D   L+EL L+E   + + E S    R++ + E  +    L    D   A+L +
Sbjct: 75  IQQDILDFPDLVELTLDEKGENGIGELSMEYNRLQEKFEELELLGALKNSEDLKPAFLNI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY R+ EK+ ++   ++I  G+ AGIK+ TL + G  A+G+L
Sbjct: 135 HPGAGGTESQDWAEMLLRMYIRYFEKKGYQYSLIDIQAGDGAGIKNVTLHVVGDFAFGFL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G+HRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ
Sbjct: 195 KGENGIHRLVRISPFDANKRRHTSFVSVHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+  A+ ML+A+LYE+E +K +E       
Sbjct: 255 HVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLKARLYEMEQEKAKEELEKKSG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYV  PY +VKD RT+ E  + + V+DGD++ F+ A L 
Sbjct: 315 EKKDIAWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
 gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
          Length = 372

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 150/355 (42%), Positives = 222/355 (62%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  +   D    R++ L+ K   P LW N   A+ +  E  H    +  I+++
Sbjct: 12  LRGTLENIIAVTRPDELKARIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGRIEKM 71

Query: 63  QDRLCDNLILLELALEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++E+A E+ D    +L+E   +L  I+  +   + ++LLSGE D   A + 
Sbjct: 72  VERIDDLETIVEMAEEDLDEKDLLLEEAEADLAGIRQALADLEIKTLLSGEYDERSAVVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAG+KSAT  +  P AYG 
Sbjct: 132 IRAGAGGVDAADFAEMLLRMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ +ID +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKIDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L +L   + E+ A    
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLQL-RHEEEQAAKKAL 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +  WG Q+RSYVLQPYQMVKDLRT+ E  +   V DG++DDF+ A +  +K
Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWRK 365


>gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315]
 gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS315]
          Length = 326

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +LLE+   ++D  + +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML--DEDDFLKEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL ++       +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     
Sbjct: 59  ENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG+++ F+ A L  +
Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323


>gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902]
 gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp.
           CC9902]
          Length = 356

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 203/342 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  + + +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L  ++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYELEADEEMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    +    EI +GEEAGIKSAT+ ++G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ I V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV  PYQMVKDLRT  E      V+DG LD F+ A+L 
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLR 344


>gi|42518772|ref|NP_964702.1| peptide chain release factor 2 [Lactobacillus johnsonii NCC 533]
 gi|41583058|gb|AAS08668.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii NCC
           533]
          Length = 332

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 149/324 (45%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAVSHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG++   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIITSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LD+F+ A L  
Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324


>gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
 gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
          Length = 368

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 212/354 (59%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + +  GG+FD D     +  L  +      W +   A+ ++ +       ++ +   
Sbjct: 1   MKSEPDTYGGIFDVDKKKTEIGELEAQMSAEGFWNDQKAAQAVIAQANLAKGVVNGMTAF 60

Query: 63  QDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             +L D   + EL  EE    +    +E       +K E++  + +  L+   D  +A L
Sbjct: 61  MAKLDDARAMEELLNEEGVDELSDEAEELQAAAVALKEELDELEIQCYLNKPHDRCNALL 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            V+AGAGGTES DWA +L RMY+RWAE+R FK E +++  GEEAG+   TL I G NA+G
Sbjct: 121 SVNAGAGGTESCDWAELLYRMYSRWAERRGFKVEVVDMLPGEEAGLDKVTLRIVGENAFG 180

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +   E+GVHRLVRISP+DS  RRHTSF ++ V   ++D IEIEI   D R DTYR+SG G
Sbjct: 181 YANAERGVHRLVRISPFDSQKRRHTSFCAVDVVAEIEDDIEIEIEAKDLREDTYRSSGKG 240

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSAVR+THIPTG+V  CQ +RSQHKN++ A  ML+A+LYE    ++       
Sbjct: 241 GQHVNKTDSAVRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKARLYERMEDEKRSAMEKM 300

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              K EIGWG QIRSYV QPYQMVKDLRT +E  +   V+DGD+D F+   L  
Sbjct: 301 YGEKGEIGWGNQIRSYVFQPYQMVKDLRTGVETGNIQAVMDGDIDRFVSGWLRA 354


>gi|57238478|ref|YP_179609.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|73621535|sp|Q5HSX6|RF2_CAMJR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57167282|gb|AAW36061.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|315058910|gb|ADT73239.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 365

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 167/349 (47%), Positives = 228/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 322

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 193/309 (62%), Positives = 247/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L N I  +++++  + D + L+ELA  E D  ++ E    L+ +  E + ++ E
Sbjct: 1   MRERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEAKRRETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AG+
Sbjct: 61  SLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEI+I+E
Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A A  ML+A++Y
Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+RE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P  VLDGDLDD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNMEKTNPGAVLDGDLDD 300

Query: 346 FMKATLAIK 354
           FM A+LA +
Sbjct: 301 FMAASLAAQ 309


>gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF]
 gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii]
          Length = 310

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 169/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E  K++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDLKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 RFIEASLK 307


>gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
           animalis subsp. lactis BB-12]
 gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 377

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 144/351 (41%), Positives = 210/351 (59%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   +    D D    + + L  +   P LW +   A+ +M +     + +  +    
Sbjct: 14  RAKYESIALALDTDRLKSQEAELEQQASAPGLWDDSEHAQKVMSQLSACQSQLKHLSSAA 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            RL D   L+EL  EE+D   L E    ++ I+ +++  + E+L+ GE DS  A + + +
Sbjct: 74  SRLDDVATLIELGQEENDADTLHEAQTEIESIQKDLDQMEIETLMDGEYDSRSAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  I  P AYG +  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQIDAPYAYGRMSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HRLVRISP+D+  RR TSF+++ V P+V+ +  IE+ +S+ R+DTY ASG GGQ V
Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPDSEIRVDTYCASGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +  
Sbjct: 254 NTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELAGD 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D+F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDEFIQAGIRWR 363


>gi|86149455|ref|ZP_01067686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86151896|ref|ZP_01070109.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88596537|ref|ZP_01099774.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148925627|ref|ZP_01809315.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205356111|ref|ZP_03222878.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218563058|ref|YP_002344837.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|315124892|ref|YP_004066896.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|24638160|sp|Q9PMK5|RF2_CAMJE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85840237|gb|EAQ57495.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841004|gb|EAQ58253.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88191378|gb|EAQ95350.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360764|emb|CAL35563.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145845637|gb|EDK22728.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205345954|gb|EDZ32590.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|284926663|gb|ADC29015.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315018614|gb|ADT66707.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315927400|gb|EFV06738.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315930833|gb|EFV09825.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 365

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|157415680|ref|YP_001482936.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047182|sp|A8FNC2|RF2_CAMJ8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157386644|gb|ABV52959.1| peptide chain release factor RF-2 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748321|gb|ADN91591.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315930963|gb|EFV09938.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 365

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 230/353 (65%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN G   
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAG--E 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 310

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 168/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 RFIEASLK 307


>gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
          Length = 310

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 168/308 (54%), Positives = 225/308 (73%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRA+L
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 RFIEASLK 307


>gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1]
 gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium
           sp. BTAi1]
          Length = 323

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E+D  ++ E  + L+ +K +V  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMYTRWAEK  FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|313207347|ref|YP_004046524.1| bacterial peptide chain release factor 2 (brf-2) [Riemerella
           anatipestifer DSM 15868]
 gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella
           anatipestifer DSM 15868]
 gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
 gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
          Length = 376

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 234/353 (66%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +S++++ L      D     ++  + KT  P  W N  EA++ +++ +     +   +E
Sbjct: 15  NISQRVSDLHKYLQIDKKKLEITNDDEKTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEE 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   L D  +L+E A E+ D +  QE       +  +VE  +F+++LS E D   A L++
Sbjct: 75  IHTGLEDLQVLIEFAKEDPDSA--QELETAYPTLLEKVENLEFKNMLSNEGDELSAVLQI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA+ML+RMY  WA+K  +K + L   +G+ AG+K+ TL I+G  A+G+L
Sbjct: 133 TAGAGGTESCDWASMLMRMYLMWADKNGYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D   +T RASGAGGQ
Sbjct: 193 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEININPADISFETMRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H PTG++++  + RSQ +NK +A  +L+++LYE+EL++R    N  E+
Sbjct: 253 NVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMRARNEIEA 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K +I WG QIR+YV+ PY++VKD+R+  E +    V++G++  F+KA L   
Sbjct: 313 NKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYLMAD 365


>gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152]
 gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152]
          Length = 367

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 148/351 (42%), Positives = 229/351 (65%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +++ L    + D  +  ++    KT +P  W +   A+++M+E +     +     I
Sbjct: 10  ISTRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELRFKKKWVEDYNTI 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D ++  E   E  D +  ++     ++    +E  +F+++LS E DS  A +++ 
Sbjct: 70  IRLNEDLIVFYEFYKE--DEADEKDVVQQYEKTIALLEDIEFKNMLSDEGDSLSAVIQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML RMYT W+EK+ FK + L    G+ AGIK+ T+ ++G  A+GWLK
Sbjct: 128 AGAGGTESCDWAEMLFRMYTMWSEKQGFKLKTLNYQAGDAAGIKTVTVEVEGDYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYPV DDSIEI+I+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPVADDSIEIDINPADIEITTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH P+G+ + C   RSQH N+A A  ML+++LYE+ELQK++   +  E++
Sbjct: 248 VNKVETKVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQKQQAARDDIEAN 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +  WG QIR+YV+ PY++VKD+RT  E  +   V+DG+++ F+KA L +
Sbjct: 308 KMKNEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAYLML 358


>gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
 gi|238688991|sp|B1VV08|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
          Length = 368

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L+ ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAADEGDADAQAEAEAELESVRKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|269925864|ref|YP_003322487.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 372

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 224/351 (63%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  +++      D +N    +  L  +     LW +  EA+ +M+    L + +    +
Sbjct: 11  NLRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDLKDQLEVWSK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ RL D  +LL+LA EED  S   E +  ++ ++ ++ + + E LLSG  D  DA + +
Sbjct: 71  IERRLEDAEVLLDLAYEEDSASDFHEAASQIRALENQLNHLELELLLSGSYDQEDAIIAI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HA  GG ++QDWA+ML+RMY RWA++R ++ E +   +GEEAG KSAT+ IKG  AYG+ 
Sbjct: 131 HAREGGIDAQDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATIEIKGKYAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G HRLVR+SP+D   RRHTSF+ + V P V+++ E++I E D +IDTYRAS AGGQ
Sbjct: 191 KAEAGQHRLVRLSPFDQAHRRHTSFALVEVLPDVEETPEVQIREEDLKIDTYRASSAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVRITHIPTG+VV CQ ERSQ +NK  A  +LRA+L ELEL+++ E     + 
Sbjct: 251 HVNKTSSAVRITHIPTGIVVTCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                GWG QIRSYVL PY MVKD RT  E +    VLDG++D F++A L+
Sbjct: 311 EHIATGWGSQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEAYLS 361


>gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71899474|ref|ZP_00681632.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12]
 gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12]
          Length = 338

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 170/328 (51%), Positives = 234/328 (71%), Gaps = 1/328 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  + E P +W     A+ L RER  LD  ++ I  + + + +    L+LA  E D  +L
Sbjct: 1   MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           Q   +++   +L+VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA MLLRMY RWA
Sbjct: 61  QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R +K E LE+  GE AGIKSAT  ++G  AYGWLK E GVHRLVR SP+DS++RRHTS
Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ 
Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH N+ +A  ML AKLYE E+QKR    ++ E+SK++IGWG QIR+YVL     +KD
Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVL-DQSRIKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           LRT +E++    VLDGDLD+F++A+L  
Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASLKA 327


>gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC
           824]
 gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
          Length = 329

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 153/322 (47%), Positives = 216/322 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P  W +V  A+ +  E + L   I     I+ R+ D+ +L+E+  E+++     E  
Sbjct: 1   MQEPDFWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  EV+  + E +LSGE D N+A L +H G GGT++QDW  MLLRMYTRWAE + 
Sbjct: 61  KEVRDLHEEVDNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAEAKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK + +++  G+EAGIKS ++ I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 FKVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +  S +I I   D ++DTYRASGAGGQHVN T+SAVRITH+PTG+VVQCQ ERSQ
Sbjct: 181 EVLPQLTQSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A NML++KL EL+ +  +E          ++GWG QIRSYV QPY MVKD RT 
Sbjct: 241 HSNKETAMNMLKSKLVELKERMHKEKVEDLAGELKDMGWGNQIRSYVFQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++   V+DG++D F+   L
Sbjct: 301 VETSNVDAVMDGEIDKFIIEYL 322


>gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c]
 gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c]
          Length = 338

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 170/328 (51%), Positives = 234/328 (71%), Gaps = 1/328 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  + E P +W     A+ L RER  LD  ++ I  + + + +    L+LA  E D  +L
Sbjct: 1   MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           Q   +++   +L+VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA MLLRMY RWA
Sbjct: 61  QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R +K E LE+  GE AGIKSAT  ++G  AYGWLK E GVHRLVR SP+DS++RRHTS
Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ 
Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH N+ +A  ML AKLYE E+QKR    ++ E+SK++IGWG QIR+YVL     +KD
Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVL-DQSRIKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           LRT +E++    VLDGDLD+F++A+L  
Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASLRA 327


>gi|223558105|gb|ACM91108.1| peptide chain release factor 2 [uncultured bacterium Rlip2]
          Length = 330

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ L +E   L   +     +  +  D + L E+ +EE D  +  +  
Sbjct: 1   MGAPDFWDDAEAAQALNQELADLKGGVDTYNALVAKTDDLMTLWEMGMEEKDEGVEADVK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                +K E+   + E LLSGE D+N+AYLE+HAGAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  AEYDSLKNELRSLELELLLSGEYDANNAYLELHAGAGGTEAQDWTQMLLRMYGRWAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++  G+EAG+KS  L +KG NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ 
Sbjct: 121 FSVETLDLQPGDEAGVKSVMLFVKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D+ E+EI   D R+DTYR+SGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPEMEDAKEVEIDMDDVRVDTYRSSGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+     MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY MVKD RT 
Sbjct: 241 IQNREVCLRMLRAKLFELEEKKKEEERAKLEGVQQKIEWGSQIRSYVFQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+++ LA K
Sbjct: 301 EETGNVQAVMDGEIDPFIESFLAAK 325


>gi|254508224|ref|ZP_05120348.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
 gi|219548841|gb|EED25842.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
          Length = 320

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 168/317 (52%), Positives = 227/317 (71%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  +
Sbjct: 2   WNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +
Sbjct: 62  EAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +
Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|303327864|ref|ZP_07358304.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
 gi|302862225|gb|EFL85159.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
          Length = 366

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 160/348 (45%), Positives = 220/348 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD  ++ QRL  + T+   P  W        +++E++ L++ +  +  ++   
Sbjct: 14  LTTFGGVFDVASSEQRLRDIETELSRPGAWDKPEALTPVLQEKRRLEDEVGRLTRLKTCR 73

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D    L LA E +D   L+      + +   ++  +   LLS E D  DA LE+H GAG
Sbjct: 74  DDMEEWLVLASENEDQEALESLEQQQKELAALLDETELVMLLSAEEDGQDAILEIHPGAG 133

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA MLLR+YTRWA +RK+  E ++   G+EAGIKS TL I GP+A+G+LK E+G
Sbjct: 134 GTESQDWAEMLLRLYTRWAARRKYAVEEMDFLPGDEAGIKSVTLRISGPHAFGFLKSERG 193

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRL+RISP+D++ RRHTSF+S+ V P   + I+++I ESD R D +R+SG GGQ VNTT
Sbjct: 194 IHRLIRISPFDASGRRHTSFASVDVIPDAGNDIQLDIKESDLRFDIFRSSGPGGQSVNTT 253

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+  QCQ E+SQH NK  A  +LRA+LY LELQKRE       + K  I
Sbjct: 254 SSAVRVTHLPTGISAQCQNEKSQHHNKETALRVLRARLYNLELQKREAERQAEYAGKDAI 313

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +G QIR+Y LQPY++VKD RT  E      VLDG +D F    L  +
Sbjct: 314 AFGSQIRTYTLQPYRLVKDHRTGSESGDVDAVLDGQIDQFQHDYLLYR 361


>gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810]
 gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium
           faecium DSM 4810]
          Length = 371

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L+ +  + D D    +++ L  +     LW +V  A+ +     H  +    I E
Sbjct: 12  QLRSTLSSIEQVTDIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  ++++LA EEDD   L+E  + L  I   ++  +  +LLSGE D  DA + +
Sbjct: 72  LDSRIEDLEVMVQLAAEEDDADTLEEAENELVSIHKTLDELEVRTLLSGEYDERDAVITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KS T  +  P AYG L
Sbjct: 132 RAGAGGVDAADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI E+D ++D +R+SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG VV  Q E+SQ +N+A A  +++++L  L+  +          
Sbjct: 252 SVNTTDSAVRMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT+ ++ +PS V DG++D+F+ A +  +
Sbjct: 312 DV-KASWGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGIRWR 363


>gi|54294665|ref|YP_127080.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
 gi|53754497|emb|CAH15981.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
          Length = 335

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD  
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQSELFELAREEDDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + +  + L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R
Sbjct: 62  TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E   F TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8]
 gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter
           aquaeolei VT8]
          Length = 310

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 175/309 (56%), Positives = 229/309 (74%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  I  + + L D   LL++A+EEDD   +QE   +L+ +  E+E  +F
Sbjct: 1   MGKERSDLELIVKTIDNLTNGLADAESLLDMAVEEDDEGTVQEIEADLENLDKELEKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE D+N+AYL++ AG+GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AG
Sbjct: 61  RRMFSGEMDANNAYLDIQAGSGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ I+G  AYGWL+ E GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+
Sbjct: 121 IKSATIHIQGDYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D R+D YRASGAGGQHVN T+SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL
Sbjct: 181 PADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +ELE+QKR E     E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGD+D
Sbjct: 241 FELEMQKRNEEKQKAEDSKSDIGWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDID 299

Query: 345 DFMKATLAI 353
            F++A+L +
Sbjct: 300 KFIEASLKM 308


>gi|153952316|ref|YP_001398744.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223625|sp|A7H5G4|RF2_CAMJD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|152939762|gb|ABS44503.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 365

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +    N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPKNIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   LQ   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDIETLQALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANSS--E 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|299768411|ref|YP_003730437.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
 gi|298698499|gb|ADI89064.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
          Length = 310

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 167/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSAAEDELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRA+L
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 RFIEASLK 307


>gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 465

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 153/351 (43%), Positives = 226/351 (64%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + +
Sbjct: 106 AQSIRLIKKRLKWKWLLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQFE 165

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +L +++ +L LA +E D  +  E+   L  ++ E + K+  +LLSG+ D    ++EV A
Sbjct: 166 QQLMEHIDMLRLARDEGDNELETESMRALADMRREAKEKELNALLSGDNDPYPCFIEVQA 225

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ES DWA M++ MY  WA++R ++   +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 226 GAGGVESMDWAAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAKS 285

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ +S    +I+ESD RI+ +R+ G GGQH
Sbjct: 286 EIGVHRLVRISPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQH 345

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            NTT+SAVRI HIPTG    CQ ERSQH N+A A  +L+++L +LE+ ++ ++      S
Sbjct: 346 ANTTESAVRIVHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQS 405

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +EI WG QIRSYVLQPY+MVKDLRTN E + P  VL+GDLDDF+ + L++
Sbjct: 406 LSEISWGNQIRSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLSL 456


>gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
 gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
          Length = 316

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 241/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  LD +++ ++EI   L D L L E+A  E D  + Q+ ++ L+ ++      + +
Sbjct: 1   MRERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGKAELQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD ND+YLE+H GAGGTE+QDWA+ML RMYTRWAEK  FK E +E   GEEAG+
Sbjct: 61  ALLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+L+KG NAYGWLK E GVHRLVRISPYDS+ RRHTSF+S+W YP+VDD+IEIEI +
Sbjct: 121 KSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIED 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQHKN+A AW MLRA+LY
Sbjct: 181 KDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELELQKREE A     SKT+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLDD
Sbjct: 241 ELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDD 300

Query: 346 FMKATLAIK 354
           FM A LA +
Sbjct: 301 FMAAALAQR 309


>gi|221217380|ref|ZP_03588851.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
 gi|221192658|gb|EEE18874.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
          Length = 348

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+A  E D + L+        ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDLFEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|52842005|ref|YP_095804.1| peptide chain release factor 2 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148359322|ref|YP_001250529.1| peptide chain release factor 2 [Legionella pneumophila str. Corby]
 gi|296107369|ref|YP_003619069.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|52629116|gb|AAU27857.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281095|gb|ABQ55183.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila str.
           Corby]
 gi|295649270|gb|ADG25117.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610478|emb|CBX00050.1| hypothetical protein LPW_18051 [Legionella pneumophila 130b]
          Length = 335

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD  
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + +  + L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R
Sbjct: 62  TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E   F TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029]
 gi|7388054|sp|P56906|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 163/360 (45%), Positives = 227/360 (63%), Gaps = 9/360 (2%)

Query: 2   KLSRQLNCLG--------GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
            L ++L  L          LFD D   + L  L  ++ + + WQ+ + A  +  +   L 
Sbjct: 4   NLDKRLEALRTEISLAARSLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLR 63

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
             I   +E++ ++      LE A   +D +I ++        + ++   + + LLSGEAD
Sbjct: 64  RQIQEYQELKSKIDAIEFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEAD 123

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N  +L ++AGAGGTES DW  ML RMY+RWA K ++  E ++  DGE  GIK  T+   
Sbjct: 124 KNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFS 183

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI  +D RIDT+
Sbjct: 184 GMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTF 243

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+     ML+AKLY+  LQ+R 
Sbjct: 244 RSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERL 303

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           E  ++    K EI WG QIR+YV QPY +VKD+RT  E  +   +LDG+ LD+F+KA LA
Sbjct: 304 EKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 363


>gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1]
          Length = 323

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 211/310 (68%), Positives = 256/310 (82%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ L+++I+ I+     L + + L+ +  EE D  I+ +  + ++++K E++ +Q 
Sbjct: 1   MMRERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDKRQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG
Sbjct: 61  DLLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+L+KG NAYG LK E GVHRLVRISP+DSN+RRHTSF+S+WVY VVDD+IEI+IS
Sbjct: 121 IKSATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVYSVVDDNIEIDIS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 ESDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KRE   N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD
Sbjct: 241 YEEELKKREAETNAIEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLD 300

Query: 345 DFMKATLAIK 354
            F++A LA +
Sbjct: 301 AFIEAALAQR 310


>gi|332662344|ref|YP_004445132.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332331158|gb|AEE48259.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 155/350 (44%), Positives = 223/350 (63%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  LG   D +N + ++      + DP  W +   A+ +++E +   N ++  K  
Sbjct: 9   LRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWNDPKRAETILKELKSHKNWVAQYKAA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D  +LLE   E +  +  +E           +E  +F + L+   D  +  LE++
Sbjct: 69  EAEVDDAEVLLEFNKEGE--ATEEEVDQKYAEALAVIEGLEFHTTLNQPEDELNVVLEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY  WA++R FK   L   DG+ AG+KSA++ I+G   +G LK
Sbjct: 127 AGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELNRQDGDVAGLKSASIEIEGEYVFGLLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY+S  +R TSFSS++V+P+VDDSIEIEI+ +D   DT+RASGAGGQH
Sbjct: 187 GENGVHRLVRVSPYNSQGKRMTSFSSVFVHPMVDDSIEIEINPADLEWDTFRASGAGGQH 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR+ H+P+G+V +CQQERSQH N+ +A  ML+++LYE EL+K++      ES 
Sbjct: 247 VNKTESAVRVRHLPSGIVAECQQERSQHMNRDKAMQMLKSRLYERELEKQKAEKETIESG 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +  WG QIRSYVL   + VKD RT  + +    VL+GD+D+F+KA L 
Sbjct: 307 KMKNEWGSQIRSYVLDD-RRVKDHRTGYQTSQTDAVLNGDIDEFLKAFLM 355


>gi|206601601|gb|EDZ38084.1| Peptide chain release factor 2 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 370

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 170/346 (49%), Positives = 235/346 (67%), Gaps = 5/346 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D     L  ++ +++ P  W++   A+ ++RE+  L+  +S I+ I     D  
Sbjct: 11  GGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIDREDADIR 70

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ELA    D   L E S  +      V+  + E +LS     N A+LE+H GAGGTES
Sbjct: 71  ALFELAS---DPDFLAELSRRVPEFSESVKAFELEEILSEAKSDNPAFLEIHPGAGGTES 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE+     E ++I  GEEAGIKSAT+L++G +A+G+L  E G+HRL
Sbjct: 128 QDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N RRHTSF+S++VYP ++D + +EI + D RIDT+RAS AGGQHVN T SA+
Sbjct: 188 VRISPFDANKRRHTSFTSVFVYPELEDDVPVEIRDEDIRIDTFRASSAGGQHVNKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GESSKTEIGW 308
           R+TH+PTG+V+  Q ERSQ +N+  A+ +LRAKLYELE ++++E  +   G  +K +IGW
Sbjct: 248 RLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKDIGW 307

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYVLQPYQ++KD RT +E    S+VLDGDLD F++  L  +
Sbjct: 308 GHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353


>gi|121612135|ref|YP_001001104.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005998|ref|ZP_02271756.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166223626|sp|A1W163|RF2_CAMJJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|87249819|gb|EAQ72778.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 365

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDANELFDLANSENDTETLEALFNDASKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           Sweden2]
          Length = 368

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 208/342 (60%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
               D +     L  L  +      W +V  A  +      L   +S   E+++++    
Sbjct: 20  RRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQ 79

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LE      D  + +E        + ++   +   LLSGE D N  +L ++AGAGGTES
Sbjct: 80  FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  MLLRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRL
Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN++RHTSF S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 200 VRISPFDSNAKRHTSFVSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG 
Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
 gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
          Length = 310

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 172/309 (55%), Positives = 219/309 (70%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  ++ I E+   L D   LLELA+E DD     E    L+ +  ++   +F
Sbjct: 1   MGKERSSLEEIVTTIDELAQGLEDVSGLLELAIEADDEETFDEAVAELEILDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQMLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 KFIEASLKA 308


>gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
 gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
          Length = 337

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +  + LE+   
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D SI +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDDSIQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDACLKWR 334


>gi|208434124|ref|YP_002265790.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
 gi|238054481|sp|B5Z9U4|RF2_HELPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|208432053|gb|ACI26924.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
          Length = 363

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D + L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDETTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
 gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
          Length = 329

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 220/326 (67%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K ++P+ W ++  A+ +  E + L+  +    +++ R+ D  IL  +A EE+D S  ++ 
Sbjct: 2   KMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEEEEDVSDCKDI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              ++ I+  ++  + E LLSGE D N+A L +H G GGT++QDW  MLLRMYTRWAEK 
Sbjct: 62  LSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWAEKS 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E L+I   ++AGIKS +L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S
Sbjct: 122 GYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +    +I+I   D R+DTYR+SGAGGQHVN T+SAVRITHIPTG+VVQCQ ERS
Sbjct: 182 VEVLPELTKDQDIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT
Sbjct: 242 QHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELKDMGWGSQIRSYVFHPYTLVKDHRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
            +E  + S V+DG++D+F+ A L  +
Sbjct: 302 GVENGNVSSVMDGEIDNFILAYLRQQ 327


>gi|110597266|ref|ZP_01385554.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
 gi|110341102|gb|EAT59570.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
          Length = 363

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 155/345 (44%), Positives = 223/345 (64%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD D   +++  L   T DP  W +  EA  +++E           +++  +  
Sbjct: 16  NSYGGIFDVDQRKEKVEDLEKITADPAFWNDQKEAHKILKELNEHKTWTEGYEKLAAKEK 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             L  LE+A E +D S   E S  +  I+ E+   +F+++LSG+ D+ +A + +HAGAGG
Sbjct: 76  VCLDELEIASELEDESFSDELSTAIAEIEQEIAAIEFKNMLSGKDDAGNALITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+G  AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIQGAYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SPYDSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPYDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I 
Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGDLD+FM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEHYLS 359


>gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
 gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
          Length = 310

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 168/308 (54%), Positives = 221/308 (71%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N ++ +  +  +L D   +L+LA+E DD S+L +    L   + E+   +F
Sbjct: 1   MAKEKGELENVLNVLDGLATQLEDAQAMLDLAVEADDESLLADVQAELTSAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+ KR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 KFIEASLK 307


>gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
 gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
          Length = 310

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 168/308 (54%), Positives = 222/308 (72%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ ++ +  +L D   +L+LA+E DD S+L +    L   +  +   +F
Sbjct: 1   MAKEKGELENVINVLEGLSTQLEDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH+PTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+ KR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 KFIEASLK 307


>gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 470

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 159/351 (45%), Positives = 226/351 (64%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S+ +  +     W   + RL  L+ +   P LW + I A  + RE   L   +  +   
Sbjct: 110 ISQSIQVIKRRLQWKKLLVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTF 169

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L+LA EE+D  +  ET   +  ++   + K+ E+LLS E D    Y+EV 
Sbjct: 170 ERELLEHIDMLKLAKEENDTELESETLKAMMDMRRVSKEKELEALLSAENDPCSCYIEVQ 229

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+M++ MY  WA++RKF    ++   GE AGIK AT+ + G  +YG+ K
Sbjct: 230 AGAGGTESNDWASMVMEMYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAK 289

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  ++I++SD RI+ +R+ GAGGQ
Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQ 349

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      
Sbjct: 350 HANTTDSAVRIIHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 409

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 410 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 460


>gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5]
 gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
 gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
 gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
          Length = 323

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 191/310 (61%), Positives = 240/310 (77%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           ++RER  L      +  I+    D L L ELA  E D S+L E    L+RI  E + ++ 
Sbjct: 1   MLRERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEAKRREI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ESLL+GEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   LE  +GE+AG
Sbjct: 61  ESLLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGEQAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ + G NAYGWLK E GVHRLVRISP+D+N+RR TSF+S+WVYPVVDDSIE+EI+
Sbjct: 121 IKSATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVVDDSIEVEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A  ML+++L
Sbjct: 181 PADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLKSRL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE+ELQKREE A   ES+K +IGWG QIRSYVL PYQ+VKDLRTN E  +P  VL+GDLD
Sbjct: 241 YEMELQKREEAAAASESAKRDIGWGHQIRSYVLAPYQLVKDLRTNFESGNPDAVLNGDLD 300

Query: 345 DFMKATLAIK 354
            FM A+LA +
Sbjct: 301 AFMAASLASR 310


>gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 368

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 210/342 (61%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
               D +     L  L  +      W +V+ A  +      L   +S   E+++++    
Sbjct: 20  RRSLDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 79

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LE      D  + +E        + ++   +   LLSGE D N  +L ++AGAGGTES
Sbjct: 80  FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  MLLRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRL
Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 200 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG 
Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018]
 gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
 gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
          Length = 380

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 141/351 (40%), Positives = 214/351 (60%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             + + +    D ++    ++ L  +  +P LW +   A+ +  +     + +  ++ ++
Sbjct: 14  EAKYSLISKALDVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAVE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R+ D   L+EL  EE+D   + E  + L  I  E++  + ++LL GE D+  A + + +
Sbjct: 74  QRIEDTKTLIELGQEEEDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ V
Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+    E       +  
Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
 gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
          Length = 310

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 169/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L +    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLVDVQSELGTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIP+G+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPSGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 RFIEASLK 307


>gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
 gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
          Length = 361

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 147/351 (41%), Positives = 211/351 (60%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++       D       ++ L T + +P  WQ+   A+  M++           + 
Sbjct: 7   ELKGRIFSDMVRLDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRG 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D   L  L+ E  D S+  E    +  +  E++  +     SG+ D+ +A L V
Sbjct: 67  LERRINDLTELAVLSRE--DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTV 124

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGG ESQDWA MLLRM+ RWA K+ F  E L+   GEEAGIKSATL I+G  AYG+L
Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFL 184

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRL+R+SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG GGQ
Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +V    +AVR+THIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     + 
Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKG 304

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +    WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L 
Sbjct: 305 ERISAEWGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 355


>gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
 gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
          Length = 329

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 172/318 (54%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L   
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTALAVIADLDNY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +F+ + SG+ DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150]
 gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150]
          Length = 337

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 150/336 (44%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +  + LE+   
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S+ +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDSSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica]
          Length = 310

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 172/309 (55%), Positives = 221/309 (71%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  I +++  L D   LLELA+E DD     E    L++++ ++   +F
Sbjct: 1   MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFHEAVAELEQLEGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DGE AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+
Sbjct: 121 LKSATIRIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD
Sbjct: 241 YELEMQKKNANRQEMEENKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 KFIEASLKA 308


>gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
 gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
          Length = 333

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 158/331 (47%), Positives = 223/331 (67%), Gaps = 2/331 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED--DCS 83
           +  K++ P  W +  +A  +M +       ++  K++++ + DN+ LL+L    D  +  
Sbjct: 1   MEKKSQSPDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEED 60

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            +    ++L+ +    +  + ++ LSGE D N+ Y+ ++AGAGG E+ DWA+ML RMY R
Sbjct: 61  TVNAVEESLEALYKLADKMKLKTQLSGEYDKNNCYISINAGAGGLEATDWADMLFRMYKR 120

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           + +   +K E  ++++ E  GIKSATL +KGP AYG+LKGE+GVHRLVRISP+DS SRRH
Sbjct: 121 YFDNVGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRH 180

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S+ V+P +DD++EI+I  SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV   
Sbjct: 181 TSFASVDVFPELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATS 240

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQ +NK  A N+L +KL +++ +++ E     +   ++I WG QIRSYV QPY MV
Sbjct: 241 QAERSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWGSQIRSYVFQPYTMV 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KD RTN E  +   V+DGDL  F+ A LA K
Sbjct: 301 KDHRTNYEMGNVEAVMDGDLQGFIDAYLASK 331


>gi|114561768|ref|YP_749281.1| peptide chain release factor 2 [Shewanella frigidimarina NCIMB 400]
 gi|114333061|gb|ABI70443.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           frigidimarina NCIMB 400]
          Length = 320

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 161/317 (50%), Positives = 219/317 (69%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L   +  I ++   L D   LLELA+EEDD     + +  L+ +
Sbjct: 2   WNEPERAQALGKERAALVVVVKTIDDMDTGLEDIQGLLELAIEEDDEETFNDAAAELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
              +   +F  + SG++D+++ YL++ +G+GGTE+QDWANM+LRMY RW +   +  E +
Sbjct: 62  DTRLADLEFRRMFSGKSDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYSPELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ DG+ AGIK AT+   G  A+GW++ E GVHRLVR SP+DS+ +RHTSF S++VYP +
Sbjct: 122 EVTDGDVAGIKGATIKFTGEYAFGWMRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD IEI+I+ SD RIDTYRASGAGGQHVN TDSA+RITH+PT  VVQCQ +RSQHKN+  
Sbjct: 182 DDDIEIDINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNTVVQCQNDRSQHKNRDS 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A+  L+AKLYELE+ K+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AFKQLKAKLYELEMHKQNADKQAAEDAKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QTVLDGDLDKFIEASLK 317


>gi|222823300|ref|YP_002574873.1| peptide chain release factor 2 [Campylobacter lari RM2100]
 gi|254790909|sp|B9KEY7|RF2_CAMLR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222538521|gb|ACM63622.1| peptide chain release factor 2 [Campylobacter lari RM2100]
          Length = 366

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 169/354 (47%), Positives = 231/354 (65%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  ++  +  +   +    RL  +      P  W +V +A ++ +E+  + N +   + 
Sbjct: 12  KLKNKVGNIASIIKPEEIKARLKEIENLENSPSFWSDVKQAGIIGKEKTKISNLLKNYEN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + L D   L +LA  E+D   +Q   D+   ++  +   +   LLSGE D  +A + +
Sbjct: 72  AFNALNDASELFDLANSENDLDTIQALFDDAPNLEDLIVSLEISMLLSGENDGKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+L
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI + D RID YRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEDKDIRIDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+P+G+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN    
Sbjct: 252 HVNKTESAVRITHMPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEANSS-- 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+N   +   ++LDGD+   ++  L  +K
Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDTRSNEAFSQVDNILDGDIKKMIEGVLIAQK 363


>gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 310

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 170/309 (55%), Positives = 221/309 (71%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  + ++   L D   LLELA+E +D     E  + L  +  ++   +F
Sbjct: 1   MGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG
Sbjct: 61  RRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+
Sbjct: 121 TKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+       E +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD
Sbjct: 241 YEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 RFIEASLKA 308


>gi|238759279|ref|ZP_04620445.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
 gi|238702440|gb|EEP94991.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
          Length = 310

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 171/309 (55%), Positives = 218/309 (70%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +S I ++   + D   LLELA+E DD     E    L  +  ++   +F
Sbjct: 1   MGKERSALEEIVSTIDQLDQGMEDVSGLLELAIEADDEETFNEAVAELDTLDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 KFIEASLKA 308


>gi|194337758|ref|YP_002019552.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194310235|gb|ACF44935.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 363

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 149/345 (43%), Positives = 223/345 (64%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD D   +++  L   + DP  W +   A  +++E     +     ++I  +  
Sbjct: 16  NSYGGIFDVDERKEKIEDLEKISFDPAFWNDQKAANKVLKELNEHKSWTDAYEKIILKAR 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                 ++A+E DD S  +E +  +  I+ ++   +F+++LSG+ D+ +A + +HAGAGG
Sbjct: 76  SCQDEFDIAIELDDESFGEELTALIASIEHDISAIEFKNMLSGKDDAGNAMITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIEGPYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPFDSNARRHTSFASVFTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY+ +  + +      E  K +I 
Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQRDEEDARKREIEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGDLD+FM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEKYLS 359


>gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311]
 gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift
           [Synechococcus sp. CC9311]
          Length = 375

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 146/351 (41%), Positives = 208/351 (59%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L       D      +   L      P  W +   A+  MR    +   +  + +
Sbjct: 13  ELTDRLGHAQDCLDVPALNAKQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D    LEL   E D  +L E    L +++  ++  + E LLSGE D   A L +
Sbjct: 73  WRGAIDDGQATLELHELEPDEDLLGEAQQGLNQLRQALDRWELERLLSGEYDKEGAVLSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRWAE +       E+ +GEEAGIKS T+ I+G  AYG+L
Sbjct: 133 NAGAGGTDAQDWAQMLLRMYTRWAEDQGMSVSVNELSEGEEAGIKSTTIEIEGRYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ + V P +D+ +E++I E D  + T R+ GAGGQ
Sbjct: 193 RNEKGTHRLVRISPFNANDKRQTSFAGVEVMPKLDEEVELDIPEKDLEVTTSRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R         
Sbjct: 253 NVNKVETAVRILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E  WG QIR+YV  PYQMVKDLRT  E T    V+DGDL+ F++A L 
Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTQEETTDVQGVMDGDLNPFIQALLR 363


>gi|225549349|ref|ZP_03770322.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
 gi|225370207|gb|EEG99647.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
          Length = 348

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+A  E D + L+        ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|296272007|ref|YP_003654638.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
 gi|296096182|gb|ADG92132.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
          Length = 364

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 161/344 (46%), Positives = 224/344 (65%), Gaps = 2/344 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             +  +   D    RL  +         W +V  A  +  E+  + + +S  K+  + L 
Sbjct: 18  QNIKDILKPDVLKSRLKEIEELESSQDFWNDVETATKIGIEKNRILSKLSKFKKANESLS 77

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L E+ALEE D    +      + +   +   +   +LS   DS++A + +H GAGG
Sbjct: 78  GTNELYEMALEEKDEDTFELLHGEAEELDNLIRSTEISVMLSNPDDSSNAIISIHPGAGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDWA+ML RMY RWAE+  FK E L+  DGEEAG+K  + +IKG NAYG+LK E G+
Sbjct: 138 TESQDWASMLYRMYLRWAERMDFKIEVLDYQDGEEAGLKDVSFIIKGENAYGYLKAENGI 197

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DSN++RHTSF+S+ V P +DD+I+I + + D RIDTYR+SGAGGQHVN T+
Sbjct: 198 HRLVRISPFDSNAKRHTSFASVMVSPEIDDNIDIVVEDKDIRIDTYRSSGAGGQHVNKTE 257

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITHI T +VVQCQ +RSQHKNKA A  ML+++LYE EL+K++ + +     K+EIG
Sbjct: 258 SAIRITHIATNIVVQCQNDRSQHKNKASAMKMLKSRLYEYELEKQQAVKD--GVEKSEIG 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV+QPYQ +KD R+NI  ++   +LDGD+   ++  L
Sbjct: 316 WGHQIRSYVMQPYQQIKDTRSNIGYSNVEAILDGDITKMIEDVL 359


>gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
 gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
          Length = 332

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ L+ +   L         ++D+L D    LEL   E D  + +E +
Sbjct: 1   MAQPDFWNDNERAQKLINDNNDLKAKRDTYVALRDQLADLETNLELLELEPDPELEKEFA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  + +  ++  +   LLS + DS +A LE+H GAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  TSFAQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
              E      GE AGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LTVETANYEPGEVAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD R+ 
Sbjct: 241 LLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 HETHNGQAVMDGDLDPFINAYLQWK 325


>gi|108562592|ref|YP_626908.1| peptide chain release factor 2 [Helicobacter pylori HPAG1]
 gi|122386784|sp|Q1CUY8|RF2_HELPH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|107836365|gb|ABF84234.1| peptide chain release factor RF-2 [Helicobacter pylori HPAG1]
          Length = 363

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9]
 gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus
           thermophilus LMD-9]
          Length = 337

 Score =  341 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 150/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +++   +  + LE+   
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S+ +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA MLL
Sbjct: 59  EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 329

 Score =  341 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 171/318 (53%), Positives = 223/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L   
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
 gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
          Length = 337

 Score =  341 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 151/336 (44%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +  + LE+   
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S+ +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 372

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 219/355 (61%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   ++ +  +   +    +++ LN K   P LW +   A+ +     H  + +  +  +
Sbjct: 12  LRLTMDNVLAVVRPERLRAQIAELNEKAAAPDLWDDPARAQEVTSALSHRQSELDRVVRM 71

Query: 63  QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++E+A E+ D    IL E + +L  +K +V   +  +LL GE D  +A + 
Sbjct: 72  GERIDDLEAMVEMAGEDPDEAEEILDEAAADLDTLKKDVSDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYATKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L   + E+      
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGIRWRK 365


>gi|290580262|ref|YP_003484654.1| putative peptide chain release factor [Streptococcus mutans NN2025]
 gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025]
          Length = 325

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 146/325 (44%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +L E+   E+D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEML--EEDDSLQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK + L+   G+EAGIKS  L  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVDVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIP+G+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +    V+DG+LD F+ A L  +
Sbjct: 299 YEVSQVDRVMDGELDGFIDAFLKWR 323


>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 375

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 227/351 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++           ++     RL  L  K  DP LW +  +AK + ++R  L   +     
Sbjct: 14  EMIESFQTYWTAQNFQEDYDRLLSLIEKANDPKLWDSPDQAKNVTQKRNELQMKLDPWLG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L+EL  EE   S L+  +D+  R+    E  Q    LSG+ D   A++ +
Sbjct: 74  LKKELLDFPDLIELTSEEMGESGLKSLNDDFDRMFESFENLQMLDALSGKDDGKAAFINI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTR+AE++ ++ E ++   GE AGIK+ATL I+G + +G+L
Sbjct: 134 HPGAGGTESQDWADMLLRMYTRFAEQKGYRAELVDYQPGETAGIKNATLYIQGDHPFGYL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN RRHTSF+S++V P VDD I++ I E D R+D YR+SGAGGQ
Sbjct: 194 KCESGVHRLVRISPFDSNKRRHTSFASVYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTGVVV CQ ERSQ KN+  A  ML+A+LYE+E QK EE       
Sbjct: 254 HVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAMKMLKARLYEMEKQKAEEENAKKAG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYV  PY +VKD RT+ E  +   V+DGDL+DF+ A L 
Sbjct: 314 EKRDIAWGSQIRSYVFHPYNLVKDHRTDFETGNVHAVMDGDLEDFIIAYLK 364


>gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304]
 gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304]
          Length = 370

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 144/353 (40%), Positives = 210/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +       N  +++  L  +   P LW +   A+++        N    + +
Sbjct: 12  EARSKFETISSALGRQNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   L EL  EEDD     E    L  ++ ++   + ++LL GE D+  A + +
Sbjct: 72  LERRLDDIATLYELGSEEDDQDSKAEAEKELTAVRSDLSDLEIQTLLDGEYDNRAAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADWAQMLMRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+NSRR TSF+++ V P+V+ +  I+I +SD R+DTY + G GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDIPDSDIRVDTYMSHGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A ++L+++L  ++  + E       +
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVMKQ-EEEAAKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E + P  V DGD+D F+ A +  +
Sbjct: 311 GDVKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGIRWR 363


>gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 327

 Score =  341 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 148/322 (45%), Positives = 222/322 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +  +   +++ER  + + +   +++ + L +  +LLEL +EE+D   ++E  
Sbjct: 1   MAQDGFWDSPDKNTAILKERTSITSLVEGWEKLAEELSEAEVLLELGVEEEDGQTIEEAR 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L +I+  ++      +L GE D+ +A + ++AGAGGT++QDWA MLLRMY RW E++ 
Sbjct: 61  QHLVKIEKGIDKLSLSRMLDGEDDARNAIVAINAGAGGTDAQDWAEMLLRMYLRWVEQKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F    ++   G+EAG+K  T  + G  AYG+LK E+GVHRLVRISP++SN +R TSF+S+
Sbjct: 121 FSYSIIDYQPGDEAGVKGVTFTVTGDYAYGYLKTEEGVHRLVRISPFNSNGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            VYP +D  I ++++E D RID +RASGAGGQHVN T SAVRI HIPTG+VVQCQQE+SQ
Sbjct: 181 AVYPEIDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGIVVQCQQEKSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+N+  A  +L+A+LY++E +++++       +K EIG+G QIRSYVL PYQMVKD R N
Sbjct: 241 HRNRDLAMKVLKARLYQVEQEQQQKQMQDNYEAKEEIGFGNQIRSYVLHPYQMVKDHRIN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           ++  + + VLDGD+D F++A L
Sbjct: 301 MDVGNVNAVLDGDIDPFIEAVL 322


>gi|54297691|ref|YP_124060.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
 gi|53751476|emb|CAH12894.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
          Length = 335

 Score =  341 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD  
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + +  D L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R
Sbjct: 62  TIIDIGDELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E   F TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKLYELE+QK+       E++K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEATKSDIGWGSQIRSYVL-DQSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|269792424|ref|YP_003317328.1| peptide chain release factor 2 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100059|gb|ACZ19046.1| bacterial peptide chain release factor 2 (bRF- 2)
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 374

 Score =  341 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 218/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  ++  L    D +   +++  L  +      W+   ++  + RE   L         
Sbjct: 12  NLRSRMCELRDSLDLEGLDRKIGELMERVSSDGFWE-REDSTEVARELSQLQQRRESFSA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   L EL    +D  + +E  D    ++  +E  Q  +LL  E D +DA + +
Sbjct: 71  LEREMEDLETLAELLQAGEDEDLSREFYDRAAEMERRLERTQVLTLLDEEYDRSDAIVGI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGG +SQDWA ML RMY RWAE+  FK   L+    +EAGIKS T  + G  AYG+L
Sbjct: 131 HAGAGGLDSQDWAEMLYRMYVRWAERNGFKVRVLDELPDQEAGIKSVTFQVSGEYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+D+  RRHTSF+S+ V PV+ D +EIEI   D ++DT+RASGAGGQ
Sbjct: 191 KGERGVHRLVRISPFDAAKRRHTSFASVEVMPVLPDDVEIEIRPEDIKMDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TDSAVRITHIPTG+VV CQ ERSQH N+A A  ML++KL+E +L++R+E     + 
Sbjct: 251 YVNMTDSAVRITHIPTGIVVSCQVERSQHMNRATALQMLKSKLFERQLRERQEQLEAIQG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K  I WG QIRSY LQP+Q+VKD R+  E  +   VLDGDLDD M A L   K
Sbjct: 311 EKRAISWGSQIRSYTLQPFQLVKDHRSGCEIGNVQAVLDGDLDDLMMAYLKFYK 364


>gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 368

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 161/352 (45%), Positives = 218/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  +  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRSRIEKLEHEASDPQLWDDQSNAQRVTSQLSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA EED    L E    L+ ++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLPVLYELAAEEDAADALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYLRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVVD +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVDTTDHIDIPEGDVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  +  
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDALKGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 GGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 362


>gi|329120961|ref|ZP_08249592.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
 gi|327471123|gb|EGF16577.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
          Length = 328

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ + ++     +A     ++ +R      LL++A+EEDD  +  +  
Sbjct: 1   MSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +   +  K+ E LL+ E D+N+A +  HAGAGGTE+QDW  ML+RMY +WAE   
Sbjct: 61  QEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L +  G+EAGIKSA  +IKG  AYG LK E+GVHRLVRISP+D+  RRHTSFS++
Sbjct: 121 YGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V  CQ ERSQ
Sbjct: 181 DVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK Q   +LRAKL+ELE++K E++    +  +  I WG QIRSYV QPY +VKD RT 
Sbjct: 241 TQNKEQCLRILRAKLFELEMKKHEQLKRNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDL+ F++  L  K
Sbjct: 301 VETGNVQAVMDGDLNPFIEGFLKSK 325


>gi|57239093|ref|YP_180229.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161172|emb|CAH58086.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 367

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 177/355 (49%), Positives = 244/355 (68%), Gaps = 2/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L++ L  + G  D DN    L  LNTK  D  LW + + A  ++ ER  +   +    
Sbjct: 12  VNLNKALQLIRGYLDIDNLTSLLVDLNTKCADTSLWNDNLTAHHVLSERARISKIVGLFT 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++       LL +   +   S+L + S  L+ +K +V+ K+ E L S EAD ND ++E
Sbjct: 72  ELEEEYQYYNELLSVISNDS-DSLLDDLSKGLEALKEKVKKKEVECLFSDEADQNDCFIE 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           + +GAGGTES DW+NMLLRMY RWAE    FKT+ +   DGEE G+KSA + + G NAYG
Sbjct: 131 IQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGVKSAIIKVIGYNAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + D RIDTYRASGAG
Sbjct: 191 WSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHDKDLRIDTYRASGAG 250

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N  +A+N+LR++LY+L+LQ++E+     
Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLYQLKLQEKEKKMAQE 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            S + +IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDGDLD F+ ATL  K
Sbjct: 311 HSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDAFIIATLTKK 365


>gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9211]
 gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9211]
          Length = 356

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 146/342 (42%), Positives = 205/342 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD          L      P  W +  +AK  MR    +   +  + +    + D 
Sbjct: 2   LRTVFDVPALNALRKDLEQIASQPEFWNDQQKAKKEMRRLDEVKAQLKKLVDWDAAIEDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            + LEL   E D  +L E    L  +K +++  + E LLSG+ D     L ++AGAGGT+
Sbjct: 62  QVSLELYELEPDDEMLAEAIKGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTRWA+    K    E+ +GEEAGIKSATL I G  AYG+L+ E+G HR
Sbjct: 122 AQDWAQMLLRMYTRWADDHGMKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + + P +++ +E++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEIMPKLEEEVELDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG
Sbjct: 242 VRIVHLPSGLAVRCTQERSQLQNKEKAMALLKAKLMIIAQEQRASQIADIRGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+YV  PYQMVKDLRT  E T    V++GDLD F++A L
Sbjct: 302 NQIRNYVFHPYQMVKDLRTGKESTDVEGVMNGDLDPFIQALL 343


>gi|193215043|ref|YP_001996242.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088520|gb|ACF13795.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
          Length = 366

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 158/350 (45%), Positives = 224/350 (64%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +L+ L G  D D  +  ++ L  KT     W N   A+ +++E            ++
Sbjct: 12  ISERLSLLRGFLDIDARLNAIAELEKKTAAEGFWSNQESAQKVLKEISGHREWTEDFLDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L      LE+A E +D S L E   N+ ++   V   +F ++LSG  D  +A L +H
Sbjct: 72  EKTLQGEEESLEIAEELEDESYLAEAEKNIDKLDRAVHALEFRNMLSGADDKRNALLTIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA+ML RMY RWAE+R FK    +  +G+ AGIK+ATL I+G  AYG+LK
Sbjct: 132 AGAGGTEAQDWADMLYRMYMRWAERRGFKVFTDDYQEGDGAGIKTATLEIQGDYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+D+N+RRHTSF+S++ YP   D +EIEI + D  +DT+R+ G GGQ+
Sbjct: 192 AENGVHRLVRVSPFDANARRHTSFASVYAYPEAPDDVEIEIRKEDLEMDTFRSGGKGGQN 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVRI H+P+G+VV CQQERSQ +N+ +A  MLR++LY+L+ ++ E      E  
Sbjct: 252 VNKVETAVRIKHVPSGIVVACQQERSQFQNRERAMKMLRSRLYQLKREEEEAAKLALEGK 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYVL   + +KD RTN E  +   VLDGD+D F++  LA
Sbjct: 312 KKKIEWGSQIRSYVLDD-RRIKDHRTNHESFNVEAVLDGDIDQFIERYLA 360


>gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM
           7109]
 gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM
           7109]
          Length = 377

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 213/358 (59%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  +  DP LW +   A+ +  E   +   +  I+E+
Sbjct: 12  LEGTLTTIERVLDLDELDWRARELEDQAADPSLWDDPDHAQQVTSELSRVQAKLKKIREL 71

Query: 63  QDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L  +A EE           +    +    ++  +E  +  ++LSGE D  +
Sbjct: 72  RQRLEDLPVLYNMAEEEAAEDPAASEDAVAMAEEERSALRAAIESLEITTMLSGEYDQRE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A + + +GAGG ++ DWA MLLRMYTRWAE+   K +  +I   EEAGIKSAT +I G  
Sbjct: 132 ALVNIRSGAGGVDAADWAEMLLRMYTRWAEQHGHKVDIYDISYAEEAGIKSATFVIHGDY 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ ++D R+D YR+S
Sbjct: 192 MYGTLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+ +   
Sbjct: 252 GPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEEKAEM 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    +     WG Q+RSYVL PYQMVKDLRT  E   P  VLDGDLD  ++A +  +
Sbjct: 312 D-ALGAGGNASWGNQMRSYVLHPYQMVKDLRTEYEVGDPQKVLDGDLDGLIEAGIRWR 368


>gi|308182345|ref|YP_003926472.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
 gi|308064530|gb|ADO06422.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
          Length = 363

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESIELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|300932665|ref|ZP_07147921.1| peptide chain release factor 2 [Corynebacterium resistens DSM
           45100]
          Length = 378

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 151/360 (41%), Positives = 214/360 (59%), Gaps = 8/360 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +  + D +        L  +  DP LW +   A+ +  E   +   +  +K 
Sbjct: 11  EMDSTLTTIEKVLDLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKS 70

Query: 62  IQDRLCDNLILLELALEE--DDCSILQETSD----NLQRIKLEVEYKQFESLLSGEADSN 115
           ++ RL D  ++ ++A E   +D     E  +        ++ E+E  +  ++LSGE D  
Sbjct: 71  LRQRLEDLPVMYDMAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQR 130

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + + +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G 
Sbjct: 131 EAVVNIRSGAGGVDAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGE 190

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSR-RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             YG L  EQG HRLVR+SP+ S    R TSF+ + V PVV+ +  I+I +++ R+D YR
Sbjct: 191 YMYGTLSVEQGAHRLVRLSPFGSGGDKRQTSFAEVEVLPVVEQTDHIDIPDAEVRVDVYR 250

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E 
Sbjct: 251 SSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEER 309

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  +     WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +  +
Sbjct: 310 AELDALGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369


>gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199]
 gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199]
          Length = 322

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 195/309 (63%), Positives = 246/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+  +  + ++   L D L+L+EL   E D + + +    L+ I+++ E  Q E
Sbjct: 1   MQERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESMQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLEVHAGAGGTE+QDWA MLLRMYTRW+E+R FK E LE   GEEAG+
Sbjct: 61  SLLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I + +
Sbjct: 121 KSATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVIDDSIDIVVED 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D ++DTYRASGAGGQHVN TDSA+RITH+P+G+VVQCQ +RSQH+N+A A  ML+A+LY
Sbjct: 181 KDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL++REE A+  E++K++IGWG QIRSYVLQPYQMVKDLRTN E ++P+ VLDGD+D 
Sbjct: 241 EAELKRREEEASATEATKSDIGWGHQIRSYVLQPYQMVKDLRTNEESSNPAAVLDGDIDA 300

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 301 FLEAALAAR 309


>gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
 gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
          Length = 325

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ D   ++ ILLE   E  D S+ +E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEFLSE--DESVHEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     
Sbjct: 59  EKLIELDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 321

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 218/309 (70%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD AI  +  +   L DN+ L+ +  EE D  I++E    ++ IK E + +Q E
Sbjct: 1   MRERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADKRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND Y+EVH+GAGGTESQDWA ML RMY RWAE+ KFK E LE H GEEAGI
Sbjct: 61  TLLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGW+K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDDSI+I+++E
Sbjct: 121 KSATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDSIDIDVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITH+ TG+VVQCQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL++RE  AN   +SKT+IGWG QIRSYVLQPYQMVKDLRT IE TSP DVLDG LD 
Sbjct: 241 EAELERRENAANAEAASKTDIGWGHQIRSYVLQPYQMVKDLRTGIESTSPQDVLDGGLDP 300

Query: 346 FMKATLAIK 354
           FM+  LA +
Sbjct: 301 FMEGALAHR 309


>gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
 gi|238686699|sp|A7I0P7|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
          Length = 364

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 161/350 (46%), Positives = 226/350 (64%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +++ +  +      + RL+ +    +DP LW +  +A  + RE+  + N ++  K+
Sbjct: 12  ELKNKISNVEAIIKPKILMTRLAEIEKTEQDPALWVDAKKAAQIGREKTKISNILAKFKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            Q+ L D     ELA+ E+D   + E      ++   +   +   +LSGE D  +A + +
Sbjct: 72  AQNELNDAKEFYELAVSENDGETINELFRESAKLSENIANLELSMMLSGENDDKNAIINI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE +DWA ML RMY R+ E+  +K E L+  +G+EAGIK    ++KG NAYG+L
Sbjct: 132 HPGAGGTEGEDWAGMLYRMYVRFCERVGYKIEILDFQEGDEAGIKDVNFIVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DS  RRHTSF+S+ V P +DD I+I I E D RID YR+SGAGGQ
Sbjct: 192 KVESGIHRLVRISPFDSAGRRHTSFASVVVSPELDDDIQINIDEKDLRIDYYRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +VVQCQ +R QHKNKA A  +L+++LYELE  K++E +N    
Sbjct: 252 HVNKTESAVRITHIPTNIVVQCQNDRDQHKNKASAMKVLKSRLYELEKLKKQEESNKTPK 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           S  +I WG QIR+YVL PYQ VKDLR+NI  +    +LDGD+   ++  L
Sbjct: 312 S--DIAWGYQIRNYVLFPYQQVKDLRSNIAYSQAEAILDGDIKKILEDVL 359


>gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
 gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
          Length = 366

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 146/351 (41%), Positives = 226/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + +++  L    + +    +++    KT  P  W +  +A+M M+E + +   I   + +
Sbjct: 10  IQKRIQALYTYLEIEQKRIQVTNDEEKTASPDFWDDPKKAEMFMKELRSIKKWIEDYESV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +L+E   E +     +E  ++  +    +E  +F+++LS E D+  A L++ 
Sbjct: 70  EQAANDLEVLIEFNKEGEVSD--EEVQEHYSKTIKLLENIEFKNMLSDEGDNLGAILQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML+RMY  WAE   +K   L    G+ AG+K+ TL I G  A+GWLK
Sbjct: 128 AGAGGTESCDWASMLMRMYLMWAESHGYKVRELNFQAGDVAGVKTVTLEIDGEFAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF S +V P+VD++IEI+I+ +D  + T R+ GAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFVSAYVSPMVDETIEIDINPADIEMQTSRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+VV CQ ERSQ  N+ +A  ML+++LY++EL K+    N  ES+
Sbjct: 248 VNKVETKVQLTHKPTGIVVICQIERSQLANRERAMEMLKSELYKIELDKKMAARNEIESN 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V++GD+D F+K+ L +
Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTGTETGNVDAVMNGDIDQFLKSYLML 358


>gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
 gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
          Length = 310

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 172/309 (55%), Positives = 218/309 (70%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  ++ I ++   + D   LLELA+E DD     E    L  +  ++   +F
Sbjct: 1   MGKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 IKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 KFIEASLKA 308


>gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
 gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
          Length = 370

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 140/352 (39%), Positives = 207/352 (58%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D       ++ L  +   P LW +  +A+ +             +  +
Sbjct: 12  LRTTMTSVRDVTDLTALEATIADLEEQVAAPDLWDDQEKAQAVTSLLSRAKAEYDRVTGM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D   L+E+  EE+D   L E    L+ +K  V   +  +LLSGE D   A + + 
Sbjct: 72  DTKVDDLEALVEMGQEENDAETLLEAEKELKIVKKAVGELEVRTLLSGEWDERSAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAGIKSAT  +  P A+G L 
Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF ++ V P+++ +  IEI E+D +ID +R+SG GGQ 
Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFVAVEVIPLIEGTDSIEIPENDLKIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +++++L  L+  + E       + 
Sbjct: 252 VNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKRAE-EAAVKKEMAG 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  +P+ V DGD+D F++A +  +
Sbjct: 311 DVKASWGDQMRSYVLNPYQMVKDLRTEFETGNPTAVFDGDIDGFIEAGIRWQ 362


>gi|317008842|gb|ADU79422.1| peptide chain release factor 2 [Helicobacter pylori India7]
          Length = 363

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+ + +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDINKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNALDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|45443320|ref|NP_994859.1| peptide chain release factor 2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806377|ref|YP_650293.1| peptide chain release factor 2 [Yersinia pestis Antiqua]
 gi|108813248|ref|YP_649015.1| peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|145597933|ref|YP_001162009.1| peptide chain release factor 2 [Yersinia pestis Pestoides F]
 gi|170023172|ref|YP_001719677.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186896595|ref|YP_001873707.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|270487483|ref|ZP_06204557.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294502944|ref|YP_003567006.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
 gi|21960210|gb|AAM86823.1|AE013928_8 peptide chain release factor RF-2 [Yersinia pestis KIM 10]
 gi|45438189|gb|AAS63736.1| peptide chain release factor RF-2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108776896|gb|ABG19415.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Nepal516]
 gi|108778290|gb|ABG12348.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Antiqua]
 gi|145209629|gb|ABP39036.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Pestoides F]
 gi|169749706|gb|ACA67224.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186699621|gb|ACC90250.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|262360979|gb|ACY57700.1| peptide chain release factor RF-2 [Yersinia pestis D106004]
 gi|262364919|gb|ACY61476.1| peptide chain release factor RF-2 [Yersinia pestis D182038]
 gi|270335987|gb|EFA46764.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294353403|gb|ADE63744.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
          Length = 310

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 172/309 (55%), Positives = 220/309 (71%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  ++ I +++  L D   LLELA+E DD     ET   L+ +  ++   +F
Sbjct: 1   MGKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE D  + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG
Sbjct: 61  RRMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+
Sbjct: 121 LKSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD
Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 KFIEASLKA 308


>gi|260775420|ref|ZP_05884317.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608601|gb|EEX34766.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 320

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 168/317 (52%), Positives = 228/317 (71%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  +
Sbjct: 2   WNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +
Sbjct: 62  EAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +
Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT++E  + 
Sbjct: 242 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTSVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
 gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
          Length = 377

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 209/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +      D+   +++ L  +   P LW +   A+ +             + E
Sbjct: 12  EARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              RL D   L  L +EE+D    QE    L+++  ++   + ++LL GE D+  A + +
Sbjct: 72  AGQRLDDIDTLYSLGMEEEDEDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAE+ ++K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+NSRR TSF+++ V P+V+ +  I++ +SD R+DTY + G GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVR+TH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+  + E       +
Sbjct: 252 GVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQ-EEEAAKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E + P  V DGD+D F+ A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWR 363


>gi|167755601|ref|ZP_02427728.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|237734350|ref|ZP_04564831.1| peptide chain release factor 2 [Mollicutes bacterium D7]
 gi|167704540|gb|EDS19119.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|229382580|gb|EEO32671.1| peptide chain release factor 2 [Coprobacillus sp. D7]
          Length = 365

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 157/346 (45%), Positives = 209/346 (60%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +       D +   + +  L   T     W +  +AK+   +   +         ++  L
Sbjct: 17  MTEFYQSIDIEAYRREIEGLTVITLQEGFWDDANKAKVTYDKLNKMKKTTDQYDLLETTL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                  EL    +D    +    +    + E+   +   LLSGE D  +A +E+H GAG
Sbjct: 77  TSLDETYELVKNTEDQEFKEILESDYTVFEKELSKFETMMLLSGEHDDLNAIVEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML RMY R+A  + +K E L+  DG+ AGIKS T+LIKG N YG LK E+G
Sbjct: 137 GTESQDWAEMLFRMYQRYAANKGWKVEVLDYLDGDVAGIKSVTMLIKGDNVYGHLKAEKG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS  RRHTSF+S+ V P  ++ IEIEI  +D +IDTYRASGAGGQH+N T
Sbjct: 197 VHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIEIQSTDLKIDTYRASGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PT +VV CQ +RSQ +N+ QA  ML++KLY+L L+K+       +  + EI
Sbjct: 257 DSAVRITHLPTNIVVTCQSQRSQIQNREQAMVMLKSKLYQLMLEKQASELKELKGEQKEI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYVL PY +VKD R+  E  +P  VLDGDLD F+ A L 
Sbjct: 317 AWGSQIRSYVLHPYSLVKDNRSGYESNNPKAVLDGDLDGFIYAYLK 362


>gi|260889274|ref|ZP_05900537.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
 gi|260860685|gb|EEX75185.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
          Length = 352

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 225/353 (63%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   L   GG+FD +N    +  L  KT +   W     ++ +++        +     +
Sbjct: 1   MKLTLKKSGGIFDIENLKNEIDGLEKKTFEADFWN-SENSQEILKAISTNKKLLEEYSSL 59

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   ++E   E  D S   E     Q +K E++  + + LL  E D N+A L ++
Sbjct: 60  NGLFEDVSTIIEFI-EMGDNSFENELEQKAQDLKNEIDNFKTKLLLDEEYDMNNAILTIN 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IKG  AYG+LK
Sbjct: 119 SGAGGTEACDWAEMLYRMYDRWANRHDFKVEILDSLAGEEAGIKSVTLNIKGNYAYGYLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D +EI+I   D +IDTYRASGAGGQH
Sbjct: 179 GEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVEIDIRTEDLKIDTYRASGAGGQH 238

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE+     + +
Sbjct: 239 VNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGT 298

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++I WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 299 ESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYAK 351


>gi|14195074|sp|P58105|RF2_CHLMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 160/341 (46%), Positives = 210/341 (61%), Gaps = 1/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +     L  L   +     W +V  A  +  +   L   +    E+++++      
Sbjct: 23  LFDPEEKETELKNLEQLSIQDSFWDDVSRAGRISEKIARLKQQLLEYNELKNKINSIKFF 82

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LE      D  I +E        + ++   +   LL+GE D N  +L ++AGAGGTES D
Sbjct: 83  LEDEESSKDLEIQKELEKEFIFCEKKIAEWETLRLLAGELDRNSCFLSINAGAGGTESCD 142

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML RMY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVR
Sbjct: 143 WVEMLFRMYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVR 202

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRI
Sbjct: 203 ISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRI 262

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K EI WG QI
Sbjct: 263 THFPTGIVVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQI 322

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           R+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA LA
Sbjct: 323 RNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 363


>gi|307636860|gb|ADN79310.1| hypothetical protein hp908_0179 [Helicobacter pylori 908]
 gi|325995449|gb|ADZ50854.1| Peptide chain release factor 2 [Helicobacter pylori 2018]
 gi|325997047|gb|ADZ49255.1| Peptide chain release factor 2 [Helicobacter pylori 2017]
          Length = 363

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|37527422|ref|NP_930766.1| peptide chain release factor 2 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786857|emb|CAE15922.1| Peptide chain release factor 2 (RF-2) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 310

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 173/309 (55%), Positives = 221/309 (71%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  I +++  L D   LLELA+E DD     E    L++++ ++   +F
Sbjct: 1   MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFNEAVVELEQLEEKLGQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DGE AG
Sbjct: 61  RRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+
Sbjct: 121 LKSATIKIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD
Sbjct: 241 YELEMQKKNANKQEMEENKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 KFIEASLKA 308


>gi|319939454|ref|ZP_08013814.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
 gi|319811440|gb|EFW07735.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
          Length = 325

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + + A+   +E   L       +++ D   ++ ILL+   E  D S  +E  
Sbjct: 1   MTEPDFWDDNVAAQKTSQELNELKQTYDNFQQMTDLFDESEILLDFLAE--DDSFQEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     
Sbjct: 59  EKLAELETRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|46446965|ref|YP_008330.1| peptide chain release factor RF-2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400606|emb|CAF24055.1| probable peptide chain release factor RF-2 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 326

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 150/323 (46%), Positives = 216/323 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W N  +A++++ E + L       +E++ +  +   LL  A E ++ S ++E  
Sbjct: 1   MGESSFWNNSEQAQLIINECRDLRAWTVPYQELKTKFENCKELLPEAYELNEESFIEELL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  I+  +   + + +LSGE D+ D YL +++GAGGTE+ DWA ML RMY RWA K+ 
Sbjct: 61  RDLDSIEKVLGDLEVQRMLSGEMDNKDCYLTINSGAGGTEACDWAQMLSRMYQRWAAKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E ++  DG+  G+KS TL  +G  AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+
Sbjct: 121 WKIEIIDFVDGDVVGLKSITLRFQGSYAYGYSKAEKGVHRLVRISPFDSNAKRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   I++EI   D R+DT+R+SGAGGQHVN TDSAVR+TH+PTG+VV CQ +RSQ
Sbjct: 181 DVSPEITTDIQVEIKPEDVRVDTFRSSGAGGQHVNKTDSAVRLTHMPTGIVVSCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK   + MLR+KLYE+E+ +RE+  N  +  K E  WG QIR+YV QPY +VKD RT 
Sbjct: 241 VQNKEACYQMLRSKLYEMEVLEREKALNNLKGEKKENAWGSQIRNYVFQPYTLVKDTRTK 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   V+DG+LD+F+ A L 
Sbjct: 301 AESGNIQAVMDGELDEFVNAYLK 323


>gi|254778885|ref|YP_003056990.1| peptide chain release factor 2 [Helicobacter pylori B38]
 gi|254000796|emb|CAX28720.1| Peptide chain release factor 2 (RF-2) [Helicobacter pylori B38]
          Length = 363

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KDSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
 gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
          Length = 355

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 144/342 (42%), Positives = 207/342 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +  +A+  MR+   +   +  +++ +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLASQPDFWDDQQQAQKQMRQLDEVKAQLEQLQQWRTAVDDAR 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E +  LQ +K  ++  + E LLSG  D   A + ++AGAGGT++
Sbjct: 63  ATLELYDLEPDEELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVSVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHVPTGLAVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIR+YV  PYQMVKDLRT +E T    V+DGDLD F++A L 
Sbjct: 303 QIRNYVFHPYQMVKDLRTAVETTDVQGVMDGDLDPFIQALLR 344


>gi|297571771|ref|YP_003697545.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932118|gb|ADH92926.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 376

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 141/359 (39%), Positives = 220/359 (61%), Gaps = 7/359 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L R  + +  + D      +++ L  ++  P LW +  +A+ +  +  H  + +  + +
Sbjct: 11  ELRRSYSQIEAVTDVTALQTKIADLTEQSGAPDLWDDPEKAQGVTSQLSHAQSELDRVVK 70

Query: 62  IQDRLCDNLILLELALEEDD------CSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           + +R+ D   L ++A+EE +        +  E    L+R++ ++   + ++LLSGE D  
Sbjct: 71  MGERVADLETLYDMAVEESESDAAMGAELFAEVDGELERVRTDLSELEIKTLLSGEYDER 130

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           DA + + +GAGG ++ DWA ML RMY RWAE+R +KT+ ++    EEAGIKS T  +  P
Sbjct: 131 DAVVTIRSGAGGVDAADWAQMLQRMYLRWAERRGYKTKVMDTSYAEEAGIKSTTFEVSAP 190

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I ES+ +ID +R+
Sbjct: 191 YAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIDIPESELKIDVFRS 250

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L + +  + E  
Sbjct: 251 SGPGGQSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLQ-KRHEEEAA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +   +  WG Q+RSYVL PYQMVKDLRT  E  +   V DGD+D F+ A +  +
Sbjct: 310 IKKELAGDVKGAWGDQMRSYVLHPYQMVKDLRTGFEVGNTESVFDGDIDGFIDAGIRWR 368


>gi|323351855|ref|ZP_08087506.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|322121912|gb|EFX93644.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|324993198|gb|EGC25118.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405]
 gi|324995500|gb|EGC27412.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678]
 gi|325687821|gb|EGD29841.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72]
 gi|325689974|gb|EGD31978.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115]
 gi|325696780|gb|EGD38668.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160]
 gi|327461467|gb|EGF07798.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1]
 gi|327469623|gb|EGF15092.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330]
 gi|327473772|gb|EGF19190.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408]
 gi|327489322|gb|EGF21115.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058]
 gi|332359597|gb|EGJ37415.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49]
 gi|332361549|gb|EGJ39353.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056]
 gi|332362808|gb|EGJ40602.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355]
 gi|332366326|gb|EGJ44078.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059]
          Length = 325

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 151/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAE--DESVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|324990937|gb|EGC22872.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353]
          Length = 325

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 151/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAE--DESVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|15644800|ref|NP_206970.1| peptide chain release factor 2 [Helicobacter pylori 26695]
 gi|2500142|sp|P55999|RF2_HELPY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2313254|gb|AAD07236.1| peptide chain release factor RF-2 (prfB) [Helicobacter pylori
           26695]
          Length = 363

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPILENSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YR+SGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
 gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
          Length = 327

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 167/326 (51%), Positives = 231/326 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++ + W N+ +A+ + +E + L + I      ++RL D  +L+E+++EEDD S ++E  
Sbjct: 1   MQESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLIEISIEEDDESSVEEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +K+ ++  + + LLSGE D N+A + +HAGAGGT++QDW  MLLRMYTRWAE + 
Sbjct: 61  NEIKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEAKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + +S +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ
Sbjct: 181 EVLPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV QPY MVKD RTN
Sbjct: 241 FQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E T+   V+DGD+D F+   L + K
Sbjct: 301 TEMTNVDAVMDGDIDIFIVEYLKVNK 326


>gi|328945974|gb|EGG40121.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087]
          Length = 325

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 151/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFMAE--DESVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415]
 gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415]
          Length = 326

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++++   ++ + LE+   E+D S+  +  
Sbjct: 1   MTEPDFWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEML--EEDASVQGDLE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMY R+   + 
Sbjct: 59  ETLAKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+SI
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSI 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|210134369|ref|YP_002300808.1| peptide chain release factor 2 [Helicobacter pylori P12]
 gi|238054483|sp|B6JPR7|RF2_HELP2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|210132337|gb|ACJ07328.1| peptide chain release factor RF-2 [Helicobacter pylori P12]
          Length = 363

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KDSLDESVELFELAQNDNDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++         
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNSTK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 356

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 207/342 (60%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD          L      P  W +  +A+  MR+   + + ++ +      + D 
Sbjct: 2   LRTVFDVPVLNALQVDLEQIAAQPDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            + LEL   E D  +++E    L ++K E++  + E LLSG  D   A L ++AGAGGT+
Sbjct: 62  KVSLELYELEPDNEMIEEAQIGLCQLKTELDLWELERLLSGPYDKEGAVLAINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMY RWAE    K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HR
Sbjct: 122 AQDWAQMLLRMYMRWAESHGMKVILSELSEGEEAGIKSATIEIEGRYAYGYLQNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ I V P +++ + +EI E D  + T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGIEVMPQLEEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG
Sbjct: 242 VRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMIIAQEQRAAEIADIRGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+YV  PYQMVKDLR+  E      V++GDLD F+++ L
Sbjct: 302 NQIRNYVFHPYQMVKDLRSGTESNDVESVMNGDLDLFIQSLL 343


>gi|148244437|ref|YP_001219131.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326264|dbj|BAF61407.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 364

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 172/364 (47%), Positives = 236/364 (64%), Gaps = 11/364 (3%)

Query: 1   MKLSRQLNCLGGL----------FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ 50
           M+LS     +  L           +      RL  +  + EDP++W+N  +A+ L RE+ 
Sbjct: 1   MELSPTYQKIEDLKKCSGTLSIHLNLKKKQYRLEEILLEMEDPNIWENPNQAQSLGREKS 60

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L +     +++   L D   LL LA  E+D        ++L   +  +E  +F+ + SG
Sbjct: 61  KLISICQTFEQVNAILEDAQELLNLAQTENDTETANGIINDLDTAQSSIEKLEFKRMFSG 120

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           + D+N AYL++ +G+GGTE+QDWA M+LRMY RW EK  FK + +E+  GE AGIKSAT+
Sbjct: 121 DLDANSAYLDIQSGSGGTEAQDWAEMVLRMYLRWGEKHNFKIKLMEVSAGEVAGIKSATI 180

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
             KG  A+GWL+ E G+HRLVR SP+++N +RHTSF S++V P +D  I+I+IS SD RI
Sbjct: 181 HFKGEYAFGWLRTEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEIDSDIDIDISPSDLRI 240

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYRASGAGGQHVN T+SAVRITH+PT  VVQCQ  RSQH NK QA   L++KLY+LE+Q
Sbjct: 241 DTYRASGAGGQHVNKTESAVRITHLPTNTVVQCQNGRSQHANKNQAIKQLQSKLYKLEMQ 300

Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           KR       E SK++I WG QIRSY+L     VKDLRT IE ++  ++L+G+LD FMKA+
Sbjct: 301 KRNTEKQSLEQSKSDISWGHQIRSYIL-DQSRVKDLRTGIESSNTQNILEGNLDQFMKAS 359

Query: 351 LAIK 354
           L  +
Sbjct: 360 LKSR 363


>gi|323466941|gb|ADX70628.1| Peptide chain release factor 2 [Lactobacillus helveticus H10]
          Length = 332

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 202/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ L+ +   L        ++Q    D L  LEL   E D  + QE  
Sbjct: 1   MMQPGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ ++      + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   
Sbjct: 61  TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDATKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+++     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKQKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|164687096|ref|ZP_02211124.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
 gi|164603981|gb|EDQ97446.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
          Length = 349

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 231/342 (67%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD  +   ++     +      W +  +A+ ++++   L N I+  + +   L +  IL+
Sbjct: 4   FDIASKQAQIQKYEEEINKQDFWDDNEKAQKILQQNSDLKNIIAEFEGLNSDLEEIEILI 63

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL LEE+D SI  +   ++++++ +++  + ++LL+G+ D N+A L ++AG GG ++QD 
Sbjct: 64  ELGLEEEDESIEHDIEKSIKKLEDKIDEVKIKTLLNGKYDVNNAVLSINAGTGGLDAQDC 123

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M+LRMY RWA++  FK + L++    EAGIKS TLLI+G NAYG+LK E+GVHR+VRI
Sbjct: 124 AQMILRMYLRWADQNNFKVKTLDMISDPEAGIKSVTLLIQGTNAYGYLKSEKGVHRIVRI 183

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D++ +RHTSF S+ V P +DD I++EI+ +D +IDTYR+SGAGGQHVN TDSAVRIT
Sbjct: 184 SPFDASGKRHTSFVSVDVTPELDDKIDVEINPNDLKIDTYRSSGAGGQHVNKTDSAVRIT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQ ERSQ  NK  A  ML+ KL  L+  + +E     +   ++I WG QIR
Sbjct: 244 HIPTGIVVQCQNERSQFANKDTAMKMLKGKLIHLKELENKERIEDIQGKYSQITWGSQIR 303

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SYV QPY++VKD RTN E  +   V+DG+++ F+   L + K
Sbjct: 304 SYVFQPYKLVKDHRTNAEIGNVDSVMDGNINLFINEYLKMNK 345


>gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
 gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 154/359 (42%), Positives = 226/359 (62%), Gaps = 8/359 (2%)

Query: 2   KLSRQLNCLG-------GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +L R++  +G          D      ++  L      P  W +   A+  ++E   L +
Sbjct: 5   ELKREIELIGSRLGKTQDYLDLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKS 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
           A+   ++ Q +L D   ++EL   E+D S+L+E   NL+++  E+E  + + LLSG  D+
Sbjct: 65  ALELYQQWQTQLEDAKAIVELLELEEDTSLLEEAQTNLEQLNHELERWELQQLLSGLYDA 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
             A L ++AGAGGT++QDWA MLLRMYTRW EK+ +K    EI +G+EAG+KSATL I+G
Sbjct: 125 KGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAEISEGDEAGLKSATLEIEG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTY 233
             AYG+LKGE+G HRLVRISP+++N +R TSF+ + V P +  +++ +EI E D  I T 
Sbjct: 185 RYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITTS 244

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+ G GGQ+VN  ++AVR+ HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R 
Sbjct: 245 RSGGKGGQNVNKVETAVRVVHIPTGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQRA 304

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +          E  WG QIR+YV  PYQMVKDLRTN+E +    V+DGDL+ F++A L 
Sbjct: 305 KEIAQIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYLR 363


>gi|188526975|ref|YP_001909662.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|238691887|sp|B2US00|RF2_HELPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188143215|gb|ACD47632.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|308061460|gb|ADO03348.1| peptide chain release factor 2 [Helicobacter pylori Cuz20]
          Length = 363

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|296394151|ref|YP_003659035.1| peptide subunit release factor 2 [Segniliparus rotundus DSM 44985]
 gi|296181298|gb|ADG98204.1| peptide chain release factor 2 [Segniliparus rotundus DSM 44985]
          Length = 372

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 151/356 (42%), Positives = 216/356 (60%), Gaps = 4/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +    D D     ++ L T+  DP LW++    + +          +  +  +
Sbjct: 12  LATTLCTVESALDLDKLRAEIADLETQAADPSLWEDQERGQEVTSGLARKQATLRAVTGL 71

Query: 63  QDRLCDNLILLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA +E+       L+E     + ++ E+E  +  +LL+GE D  +A +
Sbjct: 72  RSRLDDLHVLYELAEDEEGAQGQEALEEADTERKTLRAEIESLEVRTLLNGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K   E  +I   EEAGIKSAT  +K   AYG
Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEVYDISYAEEAGIKSATFAVKSAYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV  +  I++ E++ R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIDVPEAEIRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK  A  +L+AKL E    + +E  N  
Sbjct: 252 GQSVNTTDSAVRITHLPTGIVVTCQNEKSQLQNKLSAMRVLQAKLLERRRHEEQEQLNAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +       WG Q+RSYVL PYQMVKDLRT  E+++P  VLDG +D F+++ +  ++
Sbjct: 312 KGDGGT-SWGTQMRSYVLAPYQMVKDLRTEYEESNPGAVLDGAIDGFLESGIRWRR 366


>gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255]
 gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           winogradskyi Nb-255]
          Length = 322

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +++ E+ + L+ +K EV+ ++ E
Sbjct: 1   MQERTSLEDSLAGIGKVERELEDQIGMIELGEAENDEAVIDESENALKALKKEVDRRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMYTRWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWAAMLLRMYTRWAEKRGFKVEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATVQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL++REE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDG+LDD
Sbjct: 241 EIELKRREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGNLDD 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|319404230|emb|CBI77823.1| peptide chain release factor RF-2 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 317

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 214/310 (69%), Positives = 258/310 (83%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ+L+++++  +     L + + L+ +  EE+D  I+ E  + ++++K E++ KQ 
Sbjct: 1   MMRERQNLEDSMNSTQLFTQMLEECIELIAMGEEENDVEIITEAENTIRQLKSEIDKKQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E+LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K K E LE HDGEEAG
Sbjct: 61  ETLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILETHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPVVD++IE+++S
Sbjct: 121 IKSATILVKGYNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVVDENIEVDLS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKNKA AW+MLRA+L
Sbjct: 181 ESDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNKATAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KREE  N  E+ KTEIGWG QIRSYVLQPYQ+VKDLRT +E   P  VL+GDLD
Sbjct: 241 YEEELKKREEATNAVEAFKTEIGWGHQIRSYVLQPYQLVKDLRTGVENADPQTVLNGDLD 300

Query: 345 DFMKATLAIK 354
            F++A LA +
Sbjct: 301 TFIEAALAQR 310


>gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f]
 gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f]
          Length = 366

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 145/337 (43%), Positives = 205/337 (60%), Gaps = 4/337 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R   L  +  DP LW +   A+ + R    +   I+ +  +
Sbjct: 12  LDATLAGIETVLDIEGLRRRAQELEQEAADPDLWSDQARAQAVTRRLSGVKGDIARVDGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D +  L+L     D  +L E + +L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 72  RRRLDDLIAALDLG----DEDLLAEMAVDLPSLTRDISALEVRTLLSGEYDERDAIVQLS 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  ++ P AYG L+
Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVRCPYAYGTLR 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + V P V+ S  ++I E + RID +R+SG GGQ 
Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQG 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 248 VNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             ++ +G QIR+YVL PYQMVKDLRT +E ++   VL
Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGAVL 344


>gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614]
 gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp.
           JS614]
          Length = 375

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 209/354 (59%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   ++ +  + D +     ++ L  +   P LW +   A  +      L   +     
Sbjct: 15  QLQATMHTIEQVLDLETMRAEIADLGEQVAAPDLWDDQDNATRVTGRLSALQGELDRFTA 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D  I++E+A EE D   L E    L R+K  VE  +  +LLSGE D+ +A + +
Sbjct: 75  LQGSVDDLAIMVEMAQEEGDADALAEAEAELGRLKRSVEALEVRTLLSGEYDAREAIVTI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML+RMYTRWAE+ K+  E  ++   EEAGIKSA   I  P AYG L
Sbjct: 135 RSGAGGVDAADFAEMLMRMYTRWAEQHKYPVEVFDVSYAEEAGIKSAEFAIHAPYAYGTL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EIEI E+D R D +R+ G GGQ
Sbjct: 195 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIRTDVFRSGGPGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  ++       + +  E        
Sbjct: 255 SVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKASAM-VVLKAKLLAKKKAEEAALKKDLK 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+R+YVL PYQMVKDLRT  E  +P  V DGD+DDF++A +  ++
Sbjct: 314 GDVAAAWGDQMRNYVLNPYQMVKDLRTGYEVGNPQSVFDGDVDDFIEAGIRWRR 367


>gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 426

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 223/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +     LW +   A  + RE   L   +  +   
Sbjct: 66  IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 125

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L+LA EE+D  +  ET   L  ++   + K+ E+LLS + D    Y+EV 
Sbjct: 126 ERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQ 185

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++RKF    ++   GE AGIK AT+ + G  AYG+ K
Sbjct: 186 AGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAK 245

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P++ D S  +EI++SD RI+ +R+ GAGGQ
Sbjct: 246 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQ 305

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      
Sbjct: 306 HANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 365

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 366 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 416


>gi|220932479|ref|YP_002509387.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
 gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
          Length = 331

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 224/324 (69%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQET 88
             DP LW +  +A+ + R+ + + + I  +K++ +   +  +++ELA E++ +  +  E 
Sbjct: 1   MSDPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELAEEDETNRELWSEV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            D +  ++ +++  + +  L+GE D  +A L +H GAGGTESQDWA+MLLRMY RWAE  
Sbjct: 61  EDYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAESH 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E L+   G+EAGIK  TLLI G  +YG+LKGE+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GYKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DD IE++I   D +I+TYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ ERS
Sbjct: 181 VNVIPEIDDDIEVDIDTGDLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKNK  A  +L+A+L EL+ + R E          EI WG QIRSYV  PY ++KD RT
Sbjct: 241 QHKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGNQIRSYVFHPYNLIKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E+ +   V+DG +D+F++A L 
Sbjct: 301 GLEEGNVQKVMDGYIDEFIEAYLK 324


>gi|311743767|ref|ZP_07717573.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
 gi|311312897|gb|EFQ82808.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
          Length = 371

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/353 (41%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  +  + D D   + ++ L  +   P LW +   A+ +      L   +  +  +
Sbjct: 13  LDQTLTSVEKVLDLDAMRKEIAELQEQVGAPDLWDDQANAQRVTGRLSVLQAEVDKVTGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L E+ALEE D + + + +  L R+   +E  +  +LLSGE D  DA + + 
Sbjct: 73  RQRLDDLELLHEMALEEGDDASVADAAAELVRVHKSIEALEVRTLLSGEYDMRDALVSIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A ML RMY RWAE+  +  E  ++   EEAG+KS T  +K P AYG L 
Sbjct: 133 SGAGGVDAADFALMLQRMYIRWAERHGYTVEIYDVSYAEEAGLKSTTFAVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF++I V PV++ + EI++ + + R+D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAAIEVVPVLEQTDEIDVPDEEIRVDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A  +L+AKL  L+  +     +     
Sbjct: 253 VNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAHLDELRGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+R+YVL PYQMVKDLRT  E  +   VLDG++DDF++A +  ++
Sbjct: 313 V-QASWGDQMRNYVLNPYQMVKDLRTEHESGNTQGVLDGEIDDFIEAGIRWRR 364


>gi|317010450|gb|ADU84197.1| peptide chain release factor 2 [Helicobacter pylori SouthAfrica7]
          Length = 363

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KDSLDESVELFELAQNDNDEVTLSLLYEEALVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|297379396|gb|ADI34283.1| peptide chain release factor 2 [Helicobacter pylori v225d]
          Length = 363

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  +++ L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILESVLIAK 362


>gi|118444993|ref|YP_878978.1| peptide chain release factor 2 [Clostridium novyi NT]
 gi|118135449|gb|ABK62493.1| peptide chain release factor 2 [Clostridium novyi NT]
          Length = 337

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 165/335 (49%), Positives = 230/335 (68%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  L  K ++   W ++ +A+ + +E + + + I      + R+ D  +L+E+++E
Sbjct: 1   MEKRLGELEHKMQESDFWDDINKAQEITQEAKGIKDRIDGYNSTKTRIEDLEVLIEMSIE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S ++E  + ++ I+  ++  + E LLSGE D N+A + +H+GAGGT++QDW  MLL
Sbjct: 61  EEDESSIEEILNEVEEIESIIDNFKVEILLSGEYDKNNAIVTLHSGAGGTDAQDWTEMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAEKR +K + L+I  G+EAGIKSA L I G  AYG+LK E+G+HRLVRISP+++
Sbjct: 121 RMYTRWAEKRGYKVDVLDILPGDEAGIKSANLKITGEFAYGYLKAEKGIHRLVRISPFNA 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+S+ V P + ++ +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG
Sbjct: 181 NGKRQTSFASLEVIPELKENQDIEIKADDLRIDTYRASGAGGQHINKTDSAVRITHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQ Q ERSQ +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV Q
Sbjct: 241 IVVQSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQ 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           PY MVKD RTN E  +   V+DGD+D F+   L  
Sbjct: 301 PYTMVKDHRTNTEMGNVDAVMDGDIDIFILEYLKA 335


>gi|308183967|ref|YP_003928100.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
 gi|308059887|gb|ADO01783.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
          Length = 363

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPERIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14]
 gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           hamburgensis X14]
          Length = 322

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 250/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +I+ ++ + L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  + YLEVHAGAGGTESQDWA+MLLRMY RWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ++EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 QIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA K
Sbjct: 301 FMAATLAQK 309


>gi|58336996|ref|YP_193581.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227903556|ref|ZP_04021361.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
 gi|58254313|gb|AAV42550.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227868443|gb|EEJ75864.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
          Length = 332

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 200/324 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W N  +A+ L+ E   L        ++ +   + L  L+L  EE D  +  E  
Sbjct: 1   MAQPDFWDNQEKAQKLISENNVLKEKRDSFLKLSEDYENELTALDLLREEPDSDLQTEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  ++      + + LLSG+ DS++A  E+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  TDLIALQEAFHNYELDLLLSGKYDSHNALFEIHPGAGGTEAMDWGQMLLRMYQRYCDTAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS T  + G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGVKSVTARVVGHNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 IQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADTTGVMDGKLQPFIYSYLQW 324


>gi|317179435|dbj|BAJ57223.1| peptide chain release factor 2 [Helicobacter pylori F30]
          Length = 363

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|261839033|gb|ACX98798.1| peptide chain release factor 2 [Helicobacter pylori 52]
          Length = 363

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|315221796|ref|ZP_07863708.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
 gi|315189029|gb|EFU22732.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
          Length = 325

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L       +++ D   ++ ILL+   E  D S+ +E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYDNFQQMADLFDESEILLDFLAE--DDSVQEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++ ++   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     
Sbjct: 59  EKLAELETKMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|166711947|ref|ZP_02243154.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzicola
           BLS256]
 gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 329

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 172/318 (54%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L + 
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLSGLVDAGDLLELAESEQDEDTALAVIADLDKY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +FE + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QTHVEKLEFERMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|224534879|ref|ZP_03675448.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
 gi|224513819|gb|EEF84144.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
          Length = 350

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 151/347 (43%), Positives = 218/347 (62%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +  +A+ +++ ++ L N +    E+ +++ 
Sbjct: 5   KTFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKKAQKVIKAQRILKNKVDPWVELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+   E D   +         ++ + +     S    E D+N A+L +H+GAGG
Sbjct: 65  DLDDLCEIIENEKD---INSLEIEFNVLEKQYKDLLTISYFKEELDANGAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|308063032|gb|ADO04919.1| peptide chain release factor 2 [Helicobacter pylori Sat464]
 gi|317176986|dbj|BAJ54775.1| peptide chain release factor 2 [Helicobacter pylori F16]
          Length = 363

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|261837620|gb|ACX97386.1| peptide chain release factor RF-2 [Helicobacter pylori 51]
          Length = 363

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|111220808|ref|YP_711602.1| peptide chain release factor 2 [Frankia alni ACN14a]
 gi|111148340|emb|CAJ60012.1| peptide chain release factor RF-2 [Frankia alni ACN14a]
          Length = 369

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 218/354 (61%), Gaps = 4/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L+ +  + D +   +R   L  +  DP LW +   A+++ R        IS ++ 
Sbjct: 14  QLDATLSGIESVLDVEGLRRRAEELERQAADPDLWSDQDRAQVVTRRLSSTRGDISRVEG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D       A +  D  +L E + +L  +  ++   +  +LLSGE D  DA +++
Sbjct: 74  LRRRLDDIAA----AADLGDDDLLAEAAADLPALNGDISALEVRTLLSGEFDERDAIVQL 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L
Sbjct: 130 SAGAGGVDAADWTAMLLRMYLRWAERHGYPTEVFDTSEAEEAGLKSATFQVKAPYAYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  ++I + D RID +R+SG GGQ
Sbjct: 190 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 250 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAAKQRITG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++ +G QIR+YVL PYQ+VKDLRT+ E ++   VLDG+LD+F+ A +  ++
Sbjct: 310 GPQDVSFGSQIRNYVLHPYQLVKDLRTDTETSNTGGVLDGELDNFIDAEIRWRR 363


>gi|15611227|ref|NP_222878.1| peptide chain release factor 2 [Helicobacter pylori J99]
 gi|7388058|sp|Q9ZMR1|RF2_HELPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4154673|gb|AAD05740.1| PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2) [Helicobacter pylori J99]
          Length = 363

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   +++
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  + D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDSDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE++ FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|325662438|ref|ZP_08151044.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086228|ref|ZP_08335310.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471272|gb|EGC74496.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406387|gb|EGG85901.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 316

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 158/309 (51%), Positives = 221/309 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L +++   +E+  +  D  IL+++A EE+D S+++E    L++I+   E  + E
Sbjct: 1   MKELKSLQDSVKRTEELYRQYEDIQILIDMAYEENDESMIKEIETELKQIESTYEELRIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLS E D ++A + +HAGAGGTE+ DW NML RMY RW E + F TE L+  DG+  GI
Sbjct: 61  TLLSEEYDKDNAIVTLHAGAGGTEACDWVNMLYRMYNRWIESKGFTTEVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+L+ E+GVHRLVRISP++S ++R TSF+S  V P ++D I+IEI+E
Sbjct: 121 KTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSANKRQTSFASCDVVPDLEDDIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + +IDTYRASGAGGQHVN T SA+R+TH+PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DELKIDTYRASGAGGQHVNKTSSAIRLTHLPTGIVVQCQNERSQHSNKEKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY +VKD RTN E  + + VLDG+LD 
Sbjct: 241 LLKEQEQAEKVSGIRGEVKEIGFGNQIRSYVMQPYTLVKDHRTNEESGNVTSVLDGNLDP 300

Query: 346 FMKATLAIK 354
           F+ A L ++
Sbjct: 301 FINAYLKMR 309


>gi|259502724|ref|ZP_05745626.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
 gi|259169369|gb|EEW53864.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
          Length = 332

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ +   L         ++D+L D    LEL   E D  + QE +
Sbjct: 1   MAQPGFWDDNEKAQQLINDNNDLKEKRDTYVALRDQLADLETNLELLELEPDPDLEQEFA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  +    ++  +   LLS + D  +A LE+H GAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  ASFAKTTEALQQYRLSQLLSEKYDGKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
              E      GE AG+KS TLLIKG NA+G+L+ E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LTVETANYEPGEVAGVKSVTLLIKGRNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD R+ 
Sbjct: 241 LLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG+LD F+ A L  K
Sbjct: 301 YETHNGQAVMDGELDPFINAYLQWK 325


>gi|153009595|ref|YP_001370810.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
 gi|151561483|gb|ABS14981.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
          Length = 321

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 202/309 (65%), Positives = 259/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EEDD SI+Q+  + ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSIELIAMGEEEDDKSIIQDAENTIRELKQEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E
Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE   +   ++KTEIGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREAATDAANATKTEIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|239831796|ref|ZP_04680125.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239824063|gb|EEQ95631.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 321

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  +   L D++ L+ +  EE+D SI+Q+  + ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLTQTLNDSIELIAMGEEENDKSIIQDAENTIRELKEEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E
Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE   +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREAATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|114565810|ref|YP_752964.1| peptide chain release factor 2 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336745|gb|ABI67593.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 334

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 152/329 (46%), Positives = 218/329 (66%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  KT   + W    EA+ ++++   L   ++  KE+         +LE+A EE+D ++ 
Sbjct: 1   MQKKTLQENFWSERKEAQEILKQISKLQENLNLYKELMGTAQYLNDILEMAEEENDETLW 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE+   L  ++      +   L SG  D ++A + +HAGAGGTE+QDW  +L RMY+RWA
Sbjct: 61  QESVRELLALQKRFREFELLVLFSGPHDYSNAIVSLHAGAGGTEAQDWVEILFRMYSRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E   +  E L+  DG+EAGIKS T L++GP A+G LK E+GVHRL+RISP+DS+ RRHTS
Sbjct: 121 ENSSYSIEVLDFLDGDEAGIKSVTFLVRGPYAFGKLKCEEGVHRLIRISPFDSSGRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +++ IE+ I+  D R+DTYR+SGAGGQH+N TDSAVRITH+P+G+VVQCQ 
Sbjct: 181 FASLSVLPEINEDIEVLINVEDLRVDTYRSSGAGGQHINKTDSAVRITHLPSGIVVQCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH N+  A  +L+AKLY L+ ++ ++     +    EI WG QIR+Y L P+ ++KD
Sbjct: 241 ERSQHANRLAAMKILQAKLYALKQKEAQDKLQSIKGDYKEIAWGSQIRTYTLNPFNLIKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RTN+E  +   VLDG+LDD + A L  K
Sbjct: 301 HRTNMEIGNVQAVLDGELDDLIFACLHWK 329


>gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 329

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 170/318 (53%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LL+LA  E D         +L + 
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLAGLTDAGELLDLADSEQDEDTAVAVIADLDKY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5]
          Length = 320

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 227/309 (73%), Positives = 271/309 (87%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S+++E  D L+ +K E   +Q E
Sbjct: 1   MRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI
Sbjct: 61  AMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E
Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL++
Sbjct: 241 EAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|197294594|ref|YP_001799135.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
 gi|171853921|emb|CAM11884.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
          Length = 370

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 153/352 (43%), Positives = 226/352 (64%), Gaps = 3/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +++ L  L    +   + Q L+ +N   +    W +  +A    ++   L   I+ +K 
Sbjct: 12  NIAQNLRDLKEAINLSQSYQTLNQINELMQKKDFWDDPKKAVATSQKFNDLQEKINTLKH 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D +  L+L   +++ +      + ++++   V   + +  L+   D+N+A L  
Sbjct: 72  LETNHQDLVTFLDLESNQNNETAF--LEEEIKKLIDAVLNFKIKVFLNQPYDNNNAILIF 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GEEAGIKSATLL+KG  AYG+L
Sbjct: 130 HPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQSGEEAGIKSATLLVKGAYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVR+SP+D+N++RHTSF S  V P + + I+I++ + D + D +R+SGAGGQ
Sbjct: 190 KAEKGVHRLVRVSPFDTNAKRHTSFVSCDVLPEIKEKIKIDLRQEDLKFDFFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGE 300
           HVNTTDSAVRITH+PTG+VV CQ ERSQ++N+ +A  ML+ KL++L   +++EE A   +
Sbjct: 250 HVNTTDSAVRITHLPTGLVVSCQNERSQNQNREKALQMLKIKLFQLADKKQKEEHAKNFQ 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             + EIGWG QIRSYV  PY+MVKD RTN E      V+DG++D F+   L 
Sbjct: 310 GEQKEIGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDVFINGYLT 361


>gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
 gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
          Length = 329

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 170/318 (53%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L + 
Sbjct: 2   WNDSERAQALGRERSMLEKTVIGIADVLAGLADAADLLELAESEQDEDTAVAVLADLDKY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           ++ VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QVHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G   YGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATIRIEGEFVYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|86143360|ref|ZP_01061762.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
 gi|85830265|gb|EAQ48725.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
          Length = 368

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 224/351 (63%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++L+ L      D     +     KT DP+ W +  EA+  MR  +   N +   ++ 
Sbjct: 10  LVQRLDALKMHLGIDQKRVEIQNEEEKTFDPNFWNDPKEAEQFMRMLREKKNWVKDYEQA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D  +LLE   E D     +E      ++   VE  +F+++LS E D   A L++ 
Sbjct: 70  VTLTEDLEVLLEFHKEGDASE--EEVDKQYDKVTRLVEAMEFKNMLSDEGDDLSAVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML+RMY  W+EK  FK + L   +G+ AGIK+ TL I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWASMLMRMYLMWSEKNGFKVKELNYQEGDVAGIKTVTLEIEGAYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEI+I+ +D   D  R+SGAGGQ+
Sbjct: 188 SENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDINPADISWDFARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++   +TH PTG+V+   + RSQ +N+ +A  ML+++LYE+EL+KR+   +  E+ 
Sbjct: 248 VNKVETKAILTHHPTGIVIHNSETRSQLENREKAMQMLKSQLYEIELKKRQAARDEIEAE 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K  I WG QIR+YVL PY+++KD+RT  E  +   VLDGDLD+F+KA L +
Sbjct: 308 KKSIEWGSQIRNYVLHPYKLIKDVRTGEETGNTDAVLDGDLDNFLKAYLMM 358


>gi|109946962|ref|YP_664190.1| peptide chain release factor 2 [Helicobacter acinonychis str.
           Sheeba]
 gi|123066315|sp|Q17YT5|RF2_HELAH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109714183|emb|CAJ99191.1| peptide chain release factor RF-2 [Helicobacter acinonychis str.
           Sheeba]
          Length = 363

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q+L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKVKQKLERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L E+A  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNALDESVELFEIAQNDNDEVTLSLLYEEAPILEHGVQKVEIEIMLSGEHDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|197123211|ref|YP_002135162.1| LigA [Anaeromyxobacter sp. K]
 gi|196173060|gb|ACG74033.1| LigA [Anaeromyxobacter sp. K]
          Length = 372

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 169/351 (48%), Positives = 238/351 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LSR+L  L G  D +    R++ ++  +EDP  W + ++A+ L++E+  L+        
Sbjct: 11  ELSRRLEALRGSLDVERKELRVAEISKLSEDPAFWTDNVKAQALLKEKAQLEQVTQACAA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +EV
Sbjct: 71  VRRALDDAQALSELAEEARDDATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGWL
Sbjct: 131 KSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGGQ
Sbjct: 191 KAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VN TDSAVR+TH+PTG+VV  Q ERSQ KN++ AW +LRAKLY+LE +KR    +  E+
Sbjct: 251 KVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I +G QIRSYVLQPYQMVKDLRT +E     DVLDGDLD F++  L 
Sbjct: 311 LKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 361


>gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159]
 gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans
           UA159]
          Length = 325

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 145/325 (44%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +L E+   E+D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEML--EEDDSLQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK + L+   G+EAGIKS  L  +G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVDVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIP+G+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +    V+DG+LD F+ A L  +
Sbjct: 299 YEVSQVDRVMDGELDGFIDAFLKWR 323


>gi|322385191|ref|ZP_08058838.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
 gi|321270815|gb|EFX53728.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
          Length = 325

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+   E  D S+ +E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAE--DDSVQEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLTELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|317013590|gb|ADU81026.1| peptide chain release factor 2 [Helicobacter pylori Gambia94/24]
          Length = 363

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  ++     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQ--SSTKNEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|154248590|ref|YP_001419548.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
 gi|154162675|gb|ABS69891.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
          Length = 322

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 189/309 (61%), Positives = 240/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++ +  I  +   L DN+ L+EL   E D  ++ E S +L  +K E+  ++ E
Sbjct: 1   MQERTTLEDGLGAIDRVLRDLDDNIELIELGEAEGDEGVITEASASLDGLKAELARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND+YLEVHAGAGGT+SQDWA MLLRMY RW E+  FK E ++   GE+AG+
Sbjct: 61  ALLSGEADSNDSYLEVHAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELMDESQGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ +KG NAYGWLK E GVHRLVRISP+DSN+RR TSF+S+ VYPVVDD I ++I E
Sbjct: 121 KSATIQVKGHNAYGWLKTEAGVHRLVRISPFDSNARRQTSFASVDVYPVVDDRIVVDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT R+ GAGGQHVN T+SAVR+THIPTG+ V  + +RSQHKN+A AWNMLRAKLY
Sbjct: 181 ADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVSEGDRSQHKNRATAWNMLRAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LEL+KRE  A   +++KT+IGWG QIRSYVLQPYQ+VKDLRT +   +P +VLDGDLD 
Sbjct: 241 DLELKKREAEAAAEQAAKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMQAALAQR 309


>gi|39938959|ref|NP_950725.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
 gi|39722068|dbj|BAD04558.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
          Length = 369

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 161/352 (45%), Positives = 218/352 (61%), Gaps = 3/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L + L  L    D     Q +  LN   +    W+   +A  + ++   L +  + ++ 
Sbjct: 12  NLHQNLQDLKQALDIKKTNQTIEKLNYAMQKEDFWKYPQKAVTISQQFNDLQDKKTTLET 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   L  L    +  S L    + L+ +   V   + +  L+   D N+A L  
Sbjct: 72  LKQNYLDLETLFNLNESPNKTSAL--LEEELKNLTKAVFDFKIKIFLNQSYDINNAILLF 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GE AGIKSATLLIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQPGEGAGIKSATLLIKGTYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+NS+RHTSF +  V P +++ I+I +   D +ID +R+SGAGGQ
Sbjct: 190 KAEKGVHRLVRISPFDANSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGE 300
           HVNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A  ML+ KL++L  +K+ EE A   +
Sbjct: 250 HVNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKKQKEENAKKFQ 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S + E GWG QIRSYV  PY+MVKD RTN E      V+DG++D+F+   L 
Sbjct: 310 SDQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361


>gi|217031931|ref|ZP_03437433.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298736886|ref|YP_003729416.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
 gi|216946400|gb|EEC25005.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298356080|emb|CBI66952.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
          Length = 363

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELGRIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|260102492|ref|ZP_05752729.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
 gi|260083697|gb|EEW67817.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
          Length = 332

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 150/324 (46%), Positives = 199/324 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ L+ +   L        ++Q    D L  LEL   E D  + QE  
Sbjct: 1   MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ ++      + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   
Sbjct: 61  TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ I G NAYG LK E GVHRLV ISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVIISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
 gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
          Length = 319

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 194/309 (62%), Positives = 245/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE+  L+NA++  +E++  L D+L L+ELA  E D  ++ +    +  +K      + E
Sbjct: 1   MREKTQLENALTGTRELERDLRDSLELIELAEAEGDAEMVADAEKTIAALKERAAKMELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND +LEV++GAGGTESQDWA MLLRMYTRWAE+  +K + L+   GEEAGI
Sbjct: 61  SLLSGEADANDCFLEVNSGAGGTESQDWALMLLRMYTRWAEQHGYKVDELDETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ IKG N YGWLK E GVHRLVRISP+DS +RRHTSF+S+ V PV+DD I +EI+E
Sbjct: 121 KSATIQIKGHNGYGWLKTESGVHRLVRISPFDSQARRHTSFASVSVTPVIDDRIVVEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D ++DTYR+SGAGGQHVN TDSAVR+TH+PTG+VV CQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 KDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDMLRARIY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   E++KTEIGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD 
Sbjct: 241 EMELRKREEAAAALEATKTEIGWGHQIRSYVLQPYQMVKDLRTGVETSDSGGVLDGDLDR 300

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 301 FLQAALAQR 309


>gi|169347339|ref|ZP_02866277.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
 gi|169293956|gb|EDS76089.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
          Length = 367

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 158/346 (45%), Positives = 219/346 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +       D ++  + +  L   TE  + W +  +AK+   +   +   +     +   L
Sbjct: 17  IEEFYRSIDIESYRREIEGLTIVTEQDNFWDDTNKAKITYDKLNKMKKIVDQYDVLATTL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +     EL    ++   L+    +  + + +++  +   LLSGE D+ +A +E+H GAG
Sbjct: 77  NNLDETYELVKSSEEVEFLEILESDYLKFQEDLDKFEKMMLLSGEHDNLNAIVEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML RMY R+A ++ +K E L+  DG+ AGIKS T+LIKG + YG LK E+G
Sbjct: 137 GTESQDWAEMLFRMYQRYASRKDWKVEVLDYLDGDVAGIKSVTMLIKGEDVYGHLKAEKG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS  RRHTSF+S+ V P  ++ IEI+I   D +IDTYRASGAGGQH+N T
Sbjct: 197 VHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIDIKNEDLKIDTYRASGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT +VV CQ +RSQ KN+ QA  ML++KLY+L L+K+       +  + EI
Sbjct: 257 DSAVRITHIPTNIVVTCQSQRSQIKNREQAMIMLKSKLYQLMLEKQASELKELKGEQKEI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYVL PY +VKD R+N E ++P  VLDGDLD F+ A L 
Sbjct: 317 AWGSQIRSYVLHPYSLVKDNRSNYESSNPKAVLDGDLDGFIYAYLK 362


>gi|328949576|ref|YP_004366911.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
 gi|328449900|gb|AEB10801.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
          Length = 367

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 213/352 (60%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ L G  D     +RL+ L  +  DP+LW +   A+ + +E   +   +   + +
Sbjct: 6   LEARLDALRGYLDIPAKERRLAELEAELNDPNLWNDAERARRISQEAARIRRTVETYRTL 65

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   L+EL   E D    +  +   +  + ++E    E+LL+      +A L + 
Sbjct: 66  E---ADLEGLVELW-NELDPEEREALAGEAEEAQKKLEALYHETLLTFPHAEKNAILTIQ 121

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMY R A++  F  E +++  G EAGI  A ++++G NAYG L 
Sbjct: 122 PGAGGTEACDWAEMLLRMYRRLADRLGFSVEVVDVTPGAEAGIDYAQIIVRGENAYGLLS 181

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+EI   D RID +R+ G GGQ 
Sbjct: 182 VENGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVEIKPEDLRIDVFRSQGHGGQG 241

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRI H+PTG++V CQ  RSQHKNK  A  +L+++L++LE +K++E        
Sbjct: 242 VNTTDSAVRIVHLPTGIIVTCQNTRSQHKNKEIALKVLKSRLFQLEWKKKQEELAKLRGE 301

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYVL   Q VKD RT + +  P +VLDGD++DF+ A L  K
Sbjct: 302 VKPIEWGSQIRSYVL-DKQYVKDHRTGLMRHDPQNVLDGDIEDFIWAGLEWK 352


>gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
 gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
          Length = 321

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 213/309 (68%), Positives = 253/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQHL+  I+ I+E++  + +N+ L+ +  EE D  I+ E    L+ ++ +   +Q E
Sbjct: 1   MRERQHLETNITAIRELESAVEENVELIAMGEEEGDGEIVSEAEATLKTLQTDAAKRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND Y+EVH+GAGGTESQDWA+ML RMY RWAE+  FK E LE   GEEAGI
Sbjct: 61  TLLSGEADSNDTYMEVHSGAGGTESQDWASMLQRMYIRWAERANFKVEVLEEQGGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TLLIKG NAYGW K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDD+I+IE++E
Sbjct: 121 KSTTLLIKGHNAYGWAKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDTIDIEVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VV CQQERSQHKN+A AWNML+A+LY
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVACQQERSQHKNRATAWNMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE  AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT IE TSP DVLDG+LD+
Sbjct: 241 EAELEKREAEANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGIESTSPQDVLDGELDE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51]
 gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 315

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 152/308 (49%), Positives = 212/308 (68%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +M+E  +    +     +Q +L D L L ++A+EE D S+  E  + +  ++  ++  + 
Sbjct: 1   MMQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEGILALQQRLDGLEL 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E LLSG  D N+A + +HAGAGGTE+QDW +ML RMY R+ E+  +K E ++   G+EAG
Sbjct: 61  EILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEI 223
           IKSATL   G NA+G+LK E+GVHRLVRISP+D++ RRHTSF+S+ V P  ++D+ EI+I
Sbjct: 121 IKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQI 180

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
              D ++DTYRASGAGGQHVN T SAVRITH+PTG+VVQ Q ERSQ +N+A    +L+AK
Sbjct: 181 PPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAK 240

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L EL+ +++E+  +     + EI WG QIRSYV  PY MVKD RTN E  +   V+DG++
Sbjct: 241 LLELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEI 300

Query: 344 DDFMKATL 351
           D F+ A L
Sbjct: 301 DQFIAAYL 308


>gi|317012016|gb|ADU82624.1| peptide chain release factor 2 [Helicobacter pylori Lithuania75]
          Length = 363

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  ++     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQ--SSTKNEE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|85057585|ref|YP_456501.1| peptide chain release factor 2 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789690|gb|ABC65422.1| bacterial peptide chain release factor 2 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 370

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 160/352 (45%), Positives = 219/352 (62%), Gaps = 3/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L + L  L    +     Q +  LN   +    WQN  +A  + ++   L +  + ++ 
Sbjct: 12  NLYQNLQDLKQALNLKKTNQTIEKLNCAMQKEDFWQNPKKAVTISQQFNDLQDKKNTLEI 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D      L    ++ S L    + L+ +   V   + +  L+   D N+A L  
Sbjct: 72  LEQNYLDLETFFNLNESPNEASAL--LEEELKNLTKSVFDFKIKIFLNQPYDINNAILLF 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GE AG+KSATLLIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQLGEGAGVKSATLLIKGTYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DSNS+RHTSF +  V P +++ I+I +   D +ID +R+SGAGGQ
Sbjct: 190 KAEKGVHRLVRISPFDSNSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGE 300
           HVNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A  ML+ KL++L   Q++E+ A   +
Sbjct: 250 HVNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKQQKEQNAKKFQ 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S + E GWG QIRSYV  PY+MVKD RTN E      V+DG++D+F+   L 
Sbjct: 310 SDQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361


>gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
 gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
          Length = 364

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 232/350 (66%), Gaps = 4/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  +        R+  + T  +    W++  +A    +E++  +  +   +E
Sbjct: 12  ELEIKRQNIEKIMQPSKLEARIKEIETLEQQKEFWEDSKKAGEYQKEKKRCERQLEKFQE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D   L E++   DD   L E       ++ +++  + E +LS E DSN+A   +
Sbjct: 72  ANLALNDAKELFEIS--SDDEQTLNELFSEANSLEEQIKKAEIEVMLSDELDSNNAIFTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTESQDWA+ML RMY RWAE+R FK E L+  +G+EAGIK A+ +IKG NAYG+ 
Sbjct: 130 TPGAGGTESQDWASMLYRMYLRWAERRGFKVELLDYQEGDEAGIKDASFIIKGENAYGYA 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD+IEIEI E D RIDTYRASGAGGQ
Sbjct: 190 KVENGIHRLVRISPFDSNAKRHTSFASVQVTPEIDDNIEIEIEEKDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SA+RITHIPTG+VVQCQ +RSQHKNKA A  ML++KLYELE QKR E       
Sbjct: 250 HINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKMLKSKLYELEAQKRNE--QTSND 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K+EIGWG QIRSYVL PYQ +KDLR+NI  ++   +LDGD+D  ++  L
Sbjct: 308 DKSEIGWGHQIRSYVLAPYQQIKDLRSNIAYSNVEAILDGDIDAILEGVL 357


>gi|94987335|ref|YP_595268.1| protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731584|emb|CAJ54947.1| Protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 362

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 212/353 (60%), Gaps = 8/353 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD  +   RLS +      P  W N      +++E+  L+      +++    
Sbjct: 1   MKFFGGVFDQPSYKNRLSEIEKILSAPDAWSNPEALTPILKEKSQLEADNLRFEKLHLCH 60

Query: 67  CDNLILLELALE-----EDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAY 118
            + +   EL  E     E     L+  +     +++ +  +E  +   LL  E D  DA 
Sbjct: 61  TEMIDWFELVQEFLTTNESSTEFLEALTALELQVKKFQDAMEEAEMYLLLGAEEDKMDAI 120

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+H GAGGTE+QDWA ML RMY RWA+   F  E ++   G+EAGIKS TL I G NAY
Sbjct: 121 LEIHPGAGGTEAQDWAEMLERMYLRWADLHGFSKEEMDYLPGDEAGIKSVTLRISGENAY 180

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P   + + I+I +SD RID +R+SG 
Sbjct: 181 GLLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGEEVVIDIKDSDLRIDVFRSSGP 240

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTT SAVRITHIPTG+V QCQ E+SQH NK  A  +LRA+LYE E++ R+     
Sbjct: 241 GGQSVNTTSSAVRITHIPTGIVAQCQNEKSQHHNKESAMRILRARLYEQEIKLRDAAKQA 300

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               K  I +G QIR+Y +QPY++VKD RTN E +    VL G +D F+ + L
Sbjct: 301 QYMGKEAISFGSQIRTYTMQPYRLVKDHRTNCESSDVEAVLGGQIDKFINSYL 353


>gi|161507200|ref|YP_001577154.1| peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|160348189|gb|ABX26863.1| Peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|328461868|gb|EGF34090.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463]
          Length = 332

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 151/324 (46%), Positives = 200/324 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ L+ +   L        ++Q    D L  LEL   E D  + QE  
Sbjct: 1   MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ ++      + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   
Sbjct: 61  TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|323342407|ref|ZP_08082639.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463519|gb|EFY08713.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 347

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 152/341 (44%), Positives = 208/341 (60%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD      ++  L ++  +   W +   +   +++   L   +    ++ +RL      
Sbjct: 3   HFDLAQKEAKIKELESEMVEDGFWDDHRHSSQHIQKLNQLKKVVETHHDLLERLMSCSDS 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           + L  EE D          ++ I+ E+E      LLS + D  +A +E+H GAGGTESQD
Sbjct: 63  ILLLKEEADEEFQNSLEVEVKEIQKEMESFSVLVLLSHDYDQKNAIVEIHPGAGGTESQD 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A ML RMYTRWA+   FK   L   DG+EAG+KS +  + G  AYG+LK E+GVHRLVR
Sbjct: 123 FAEMLYRMYTRWAQDHGFKISVLNYLDGDEAGLKSVSFSVSGMFAYGYLKAEKGVHRLVR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DS+ RRHTSF+S+ V P  D+SIEI I   D  +DT RA+GAGGQHVN TDSAVRI
Sbjct: 183 ISPFDSSGRRHTSFASVDVAPEFDNSIEITILPEDIDVDTMRATGAGGQHVNKTDSAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH  TG+VV CQ  RSQ +N+ +A  ML++KLY+ E+++++      +     I WG QI
Sbjct: 243 THKKTGIVVTCQAGRSQLQNREEALMMLKSKLYQREIEEKQAQLAAIKGEHKLIEWGSQI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYV  PY MVKD RT  E +   DVLDGD+DDF++A L +
Sbjct: 303 RSYVAHPYTMVKDHRTKFETSQYGDVLDGDIDDFIEAFLKM 343


>gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
 gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
          Length = 350

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 210/323 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+  + E   L N I  +  +  ++ D  +L+ELA E +D + ++E  
Sbjct: 1   MAEPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                I+  +   + + LL+G  D  +A+L +++GAGGTES DWA+MLLRMY RW E+  
Sbjct: 61  KEYGVIQNGLAEFELKMLLNGPNDRYNAFLTINSGAGGTESCDWADMLLRMYQRWIERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK+E ++I  GEEAGIKS TL + G  A+G+L  E+GVHRLVRISP+D+N RRHTSF+ +
Sbjct: 121 FKSEVMDIQLGEEAGIKSCTLKVAGEYAFGYLATERGVHRLVRISPFDANKRRHTSFAGV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + +S  IEI+E+D  +DTYR+ G GGQ+VN  ++AVRI HIPTG+V  CQ ERSQ
Sbjct: 181 DVVPELPESAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVAACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNK  A  ML+AKL ++E+ K           K ++ +G QIRSYV QPYQ V DLRT 
Sbjct: 241 QKNKVTAMRMLQAKLQQIEVDKMAAETAAAYGEKADVSFGSQIRSYVFQPYQKVLDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           ++ ++ S V+DGD+D F++  L 
Sbjct: 301 VDTSNISAVMDGDIDAFIQGKLR 323


>gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium
           praevalens DSM 2228]
          Length = 365

 Score =  338 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 165/353 (46%), Positives = 230/353 (65%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L  L D +   +  + +  +      W +   A+   ++   +   I  I+ 
Sbjct: 11  ELKASFQDLSDLLDREKLFETKNSIEAEMAAGGFWDDKENARQKSQQLDRIKKRIKVIQS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++  +  I LELA EE D ++ +E  + L  ++ E+E  + +  L+   D ++A L +
Sbjct: 71  LEEKFEEAEIYLELAAEE-DANLNKELQNTLAELEKEIEKLELKLRLNEPYDDHNAILSI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY+RWAE   ++ E L+ + GEEAGIKS TL+I G  AYG+L
Sbjct: 130 HPGAGGTESQDWAQMLLRMYSRWAEANDYQLETLDFNPGEEAGIKSVTLMISGDYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+D++ RRHTSF+S+ V P +D  +E+EI E++ +IDTYRASGAGGQ
Sbjct: 190 KGERGVHRLVRISPFDASGRRHTSFASVDVMPEIDSDLEVEIDENNLKIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH PTGVVVQCQ +RSQHKNK  A  +L +KL EL+ + + E  +    
Sbjct: 250 HVNKTDSAVRITHQPTGVVVQCQNQRSQHKNKETAMKILSSKLLELKREAQAEKIDELGG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              EI WG QIRSYV  PY M+KD RT+ E+ +   V+DG LD+F+++ L  K
Sbjct: 310 EHKEIAWGSQIRSYVFHPYSMIKDHRTDFEEGNVDKVMDGYLDEFIESYLKYK 362


>gi|261417352|ref|YP_003251035.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373808|gb|ACX76553.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 368

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 144/351 (41%), Positives = 224/351 (63%), Gaps = 1/351 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +++ L G  D +   + L  L   + DP+LW +  +A+ +M++  +L   I   K
Sbjct: 11  IELRSRIDKLWGYLDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWK 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+     D   L E++ +E+   +      ++  +K  VE  +F+ +L+G  D+    + 
Sbjct: 71  EVSQTCDDLAELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMS 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA ML RMYT + E+ K   + ++  + E+AG+KSAT+ +   NAYG 
Sbjct: 131 IHPGAGGTESQDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGL 190

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVRISP+D+N+RRHTSF+++++YP   + +E ++  S+ R+DTYR+SGAGG
Sbjct: 191 LRSEIGVHRLVRISPFDANARRHTSFTAVYLYPE-HEDVEFDLDMSEVRVDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q++N TDSAVR+TH+PTG++  CQ ERSQ +N+   + ML+  + E    + E   +   
Sbjct: 250 QYINKTDSAVRMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDARM 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K ++ WG QIRSYVLQPYQ+VKDLRT +E +  + VLDG +  F+ A L
Sbjct: 310 AEKKKVEWGSQIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 360


>gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
 gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
          Length = 337

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 150/336 (44%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   ++   L         +Q+   +  + LE+   
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETELYLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D SI +E  + L+++   +   +   LLS   D ++A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDDSIQEELEETLEKLDKIMTSYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
 gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
          Length = 376

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 146/353 (41%), Positives = 230/353 (65%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  ++  L      +     ++  + KT  P  W N   A+  +++ +     +    E
Sbjct: 15  EVQSRIEDLHRYLQIEKKKIEIANDDEKTAAPEFWDNPKTAEAFLKQLRSKKKWVESYDE 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I  +  D  +L + A E+ D    +E  +   ++  ++E  +F+++LS E D   A L++
Sbjct: 75  IHTQFEDLQVLADFAKEDPDSE--KELDETFPQLVEKIEDLEFKNMLSNEGDELSAVLQI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA+ML+RMYT WAEK+ +K   L   +G+ AG+K+ TL I+G  A+G+L
Sbjct: 133 TAGAGGTESCDWASMLMRMYTMWAEKQGYKIRELNFQEGDVAGVKTVTLEIEGEYAFGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF S++VYP+VDD+IEI I+ +D   +T RASGAGGQ
Sbjct: 193 KGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFETMRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H PTG++++  + RSQ +NK +A  +LR++LYE+EL++R +  N  E+
Sbjct: 253 NVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEA 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K +I WG QIR+YV+ PY++VKD+R+  E +    V++G++  F+KA L   
Sbjct: 313 NKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGNITPFLKAFLMAD 365


>gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
 gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
          Length = 339

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 144/330 (43%), Positives = 214/330 (64%), Gaps = 1/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +      P+ W +  +A+  ++    L + +   ++ +  L D   + EL   EDD S+ 
Sbjct: 1   MEQLAAQPNFWDDQTQAQKTLQTLSDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLR 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE   N+  +  +++  + + LLSG  D + A L ++AGAGGT++QDWA MLLRMYTRW 
Sbjct: 61  QEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWG 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E + +K    EI +G+EAGIKSATL ++GP AYG+LK E+G HRLVRISP+++N +R TS
Sbjct: 121 EAQGYKVHLAEISEGDEAGIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTS 180

Query: 206 FSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           F+ + + P++D+ +I ++I E D  I T RA G GGQ+VN  ++AVRI HIPTG+ V+C 
Sbjct: 181 FAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCT 240

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QERSQ +N+ +A  +L+AKL  +  ++R +          E  WG QIR+YV  PYQMVK
Sbjct: 241 QERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQMVK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           DLRT  E T+ +DV++G+LD F++A L  +
Sbjct: 301 DLRTGEETTAINDVMNGELDGFIQAYLRQE 330


>gi|47558936|gb|AAT35568.1| protein release factor 2 [Chlamydia trachomatis]
          Length = 368

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 158/350 (45%), Positives = 210/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L       D +     L  L  +      W +V  A  +      L   +S   E+
Sbjct: 12  LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++++      LE      D  + +E        + ++   +   LLSGE D +  +L ++
Sbjct: 72  KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCERKITEWETLRLLSGELDRSSCFLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  M+LRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQH
Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH PTG+VV  Q ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +
Sbjct: 252 VNVTDSAVRITHFPTGIVVSRQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409924|gb|ABP66928.1| bacterial peptide chain release factor 2 (bRF-2)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 323

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 160/313 (51%), Positives = 218/313 (69%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
             ++ ++++ + L + I   +++  +  D  +L +L +EE +  +  E   +L  ++ ++
Sbjct: 2   ENSQKVLQQIKRLKDKIERYQKLYSQWEDLKVLTQLCIEESNIEMSDELEKDLIDLERKI 61

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           E  + E LL+G  D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  
Sbjct: 62  EEFKLEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILP 121

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  
Sbjct: 122 GEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDT 181

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +IEI E D  IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +
Sbjct: 182 DIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKI 241

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL EL  ++R E     +  +TEIGWG QIRSYV  PY +VKD RT+ E  +   V+
Sbjct: 242 LKAKLLELREKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTDAEVGNVEAVM 301

Query: 340 DGDLDDFMKATLA 352
           DG++D F+ A L 
Sbjct: 302 DGEIDVFINAYLK 314


>gi|327459899|gb|EGF06239.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057]
          Length = 325

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   ++   L        ++ +   ++ ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAE--DESVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
 gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
          Length = 329

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 151/324 (46%), Positives = 219/324 (67%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
               + W +  +A+ +++E + + + I   + + D+  +  +++    EE D +  +E  
Sbjct: 1   MSQENFWDDQDKAQEILKEAKMVKDRIEDYQSVIDQTEEVQMMITF-TEEGDQTFEKELK 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + + ++ + V+  +  +LL G+ D     L +HAG GG ++QDWA ML+RMY+RWAE + 
Sbjct: 60  ETINQLDVRVKTMKTATLLQGQYDRFSVILSIHAGTGGLDAQDWAKMLMRMYSRWAEAKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L++    EAGIKS T LI+G NAYG+LKGE+GVHRLVRISP+DS+ +RHTSF+S+
Sbjct: 120 YGVEILDLIQDPEAGIKSVTFLIEGINAYGYLKGEKGVHRLVRISPFDSSGKRHTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE+EI+ +D +IDTYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ +RSQ
Sbjct: 180 DVMPELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGLVVQCQNQRSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+  +  ML+AKL EL+ ++++E     +   ++I WG QIRSYV  PY + KD RTN
Sbjct: 240 HSNRETSMKMLKAKLIELKEREQKEKIEDLQGEYSQIAWGSQIRSYVFNPYNLAKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   V+DGD+D F+   L  
Sbjct: 300 TEMGNIQSVMDGDIDLFINEYLTW 323


>gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
 gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
          Length = 325

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 220/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +   A+ + +E + + + I  ++ ++ +L D  +L E+ +++DD     E  
Sbjct: 1   MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVRSKLDDIEVLKEI-MDDDDEESAYEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N++ I+ E++    E LLSGE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 60  NNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKN 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YKVEMIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +I+I   D +IDTYRASGAGGQH+N TDSAVRITH+PTGVVVQCQ ERSQ
Sbjct: 180 EVLPELTKEQDIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             NK  A  ML+AKL EL+ +  +E          ++GWG QIRSYV  PY +VKD RTN
Sbjct: 240 FSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E ++ + V+DGDLD F+ + L   K
Sbjct: 300 VEVSNVTAVMDGDLDLFVNSYLKSLK 325


>gi|254776429|ref|ZP_05217945.1| peptide chain release factor 2 [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 370

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 217/354 (61%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       +   + ++ ++E  +  +LLSGE D  +A + 
Sbjct: 72  RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  +
Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDALK 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 GEGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364


>gi|125717712|ref|YP_001034845.1| peptide chain release factor 2 [Streptococcus sanguinis SK36]
 gi|125497629|gb|ABN44295.1| Peptide chain release factor 2, putative [Streptococcus sanguinis
           SK36]
          Length = 325

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+   E  D  +  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAE--DELVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|194333053|ref|YP_002014913.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
 gi|194310871|gb|ACF45266.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
          Length = 381

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 152/346 (43%), Positives = 222/346 (64%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           LN  GG+FD D  ++++  L   T +P  W +  EA  +++E           ++I   +
Sbjct: 34  LNSYGGIFDIDERLKKIEELEQITAEPDFWNDQKEAHRIVKEINEHKTWTDDFQKIAADV 93

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                 +E+A E +D S+  E +  +  I+ E+   + +++LSG+ D  +A L ++AGAG
Sbjct: 94  ASRQEEVEIAEELEDESLGSEIAGGIDSIEKEITALESKNMLSGKDDPGNALLTINAGAG 153

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY RWAE++ +K    +  +GE AGIK+ATL I GP AYG+LK E G
Sbjct: 154 GTEAQDWAQMLYRMYMRWAERKGYKVFMDDYQEGEGAGIKTATLEIVGPYAYGYLKAENG 213

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DSN+RRHTSF+S++ YP      EI+I + D  + T+R+ G GGQ+VN  
Sbjct: 214 VHRLVRVSPFDSNARRHTSFASVYTYPEAPPDAEIDIRKEDLELSTFRSGGKGGQNVNKV 273

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ E      E  K +I
Sbjct: 274 ETAVRIKHIPSGIVVSCQQERSQFQNRERAIKMLMAQLYKKQREEEEARKQAVEGQKMKI 333

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV+   + +KD RTN E+     VLDGD+DDF++  L+
Sbjct: 334 EWGSQIRSYVMDD-RRIKDHRTNHERHDIEAVLDGDIDDFIEKYLS 378


>gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
 gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
          Length = 327

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 164/326 (50%), Positives = 229/326 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++ + W ++ +A+ + +E + L + I      ++RL D  IL+E+++EEDD S ++E  
Sbjct: 1   MQESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ I++ ++  + + LLSGE D N+A + +HAGAGGT++QDW  MLLRMYTRW+E + 
Sbjct: 61  NEVKEIQIIIDEFRVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSETKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + +S +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ
Sbjct: 181 EILPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV QPY MVKD RTN
Sbjct: 241 FQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V+DGD+D F+   L   K
Sbjct: 301 TEMGNVEAVMDGDIDIFIIEYLKANK 326


>gi|325694230|gb|EGD36146.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150]
          Length = 325

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   ++   L        ++ +   ++ ILL+   E  D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAE--DESVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQVAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
 gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
          Length = 371

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 162/347 (46%), Positives = 218/347 (62%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           LN L    D +   + +  L  +T D H W N  +AK +  +   +        ++   L
Sbjct: 17  LNELFVSIDIEGLKREIEGLTVQTLDEHFWNNQEQAKKIYNQLNEMKKTTDTYDDLVSSL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D     +   E +D    +    + +  +  +   +   L SGE D ++A +E+H GAG
Sbjct: 77  NDLDETYDYVKETEDTDFKEALDQDYELFEKHLNDFEKTLLFSGEYDHHNAIVEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML+RMY R+ +K+ FK E L+  DGEEAG+KS TL   G NAYG LK E+G
Sbjct: 137 GTESQDWAAMLMRMYQRYGDKKDFKVEVLDYLDGEEAGLKSVTLRFIGYNAYGHLKAEKG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS+ RRHTSF+S+ V P  D+ IEIEI ++D RIDTYRASGAGGQH+N T
Sbjct: 197 VHRLVRISPFDSSKRRHTSFASVDVMPEFDNDIEIEIDQNDLRIDTYRASGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSA+RITHIPT +VV CQ +RSQ +N+ QA  ML++KLY++ L+++    +  +  +  I
Sbjct: 257 DSAIRITHIPTHIVVTCQSQRSQIQNREQALIMLKSKLYQVMLEEQASKLSDIKGEQKAI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYVL PY MVKD R+  E  +P  +LDGDLDD + A L  
Sbjct: 317 EWGSQIRSYVLHPYSMVKDNRSGYESNNPKAILDGDLDDCIYAYLKA 363


>gi|49474202|ref|YP_032244.1| peptide chain release factor 2 [Bartonella quintana str. Toulouse]
 gi|49239706|emb|CAF26082.1| Peptide chain release factor 2 (rf-2 [Bartonella quintana str.
           Toulouse]
          Length = 322

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 211/310 (68%), Positives = 254/310 (81%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ LD++IS I+     L + + L+ +  EE D  I+ +  + ++ +K E++ +Q 
Sbjct: 1   MMRERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIITDAENLIRNLKNEIDKRQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + LLS EAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG
Sbjct: 61  DMLLSREADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ +KG NAYG LK E GVHRLVRISPYDSN++RHTSF+SIWVYPV+DD+IE+++S
Sbjct: 121 IKSATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYPVIDDNIEVDVS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD RIDTYR+SGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 ESDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KREE  N  ESSKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD
Sbjct: 241 YEQELKKREEKTNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLD 300

Query: 345 DFMKATLAIK 354
            F++A LA +
Sbjct: 301 AFIEAALAQR 310


>gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
 gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
          Length = 378

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 131/362 (36%), Positives = 209/362 (57%), Gaps = 9/362 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL    + +  + D     ++++ L  +   P LW +   A+ + +      + +  ++ 
Sbjct: 12  KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71

Query: 62  IQDRLCDNLILLELALEEDDCS--------ILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           ++ RL D   L+EL  EE            I+++     + +  ++   +  +LL+GE D
Sbjct: 72  MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
              A + + +GAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAGIKSAT  I 
Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P AYG L  E G HRL R+SP+++  +R TSF+++ V P+++ +  I++ ESD +ID +
Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L   ++E
Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLL-RHQQE 310

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                  +   +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+   +  
Sbjct: 311 HEKKKELAGDVKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDTFIDEGIRW 370

Query: 354 KK 355
           +K
Sbjct: 371 RK 372


>gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
 gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
          Length = 322

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+N +  I   +  L D + ++EL   E+D +++ E  + L+ +K +V  ++ E
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGMIELGEAENDEAVVTEAENALKALKKDVARQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|82703392|ref|YP_412958.1| peptide chain release factor 2 [Nitrosospira multiformis ATCC
           25196]
 gi|82411457|gb|ABB75566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosospira
           multiformis ATCC 25196]
          Length = 310

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 160/308 (51%), Positives = 224/308 (72%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + RE++ L++ +  ++ I  +L D   L E+A EEDD + LQ  + ++  ++  V   +F
Sbjct: 1   MGREKKILESVVINLETISRQLQDARELFEMAEEEDDDATLQSVARDISHLEKAVSDMEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D+N+ ++++ +G+GGTE+QDWA ML RMY R+ E+R ++ E +E   GE AG
Sbjct: 61  RRMFSNPMDTNNCFVDIQSGSGGTEAQDWAAMLERMYLRYCERRGYQVEVMEESPGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSA+L I G  AYG+L+ E GVHRLVR SP+DS +RRHTSF+S++VYP VD++IEI+I+
Sbjct: 121 IKSASLKISGEYAYGYLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDETIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D R+DT+RASGAGGQH+N TDSAVRITH PTG+VVQCQ  RSQH+N+A A  ML+++L
Sbjct: 181 PADLRVDTFRASGAGGQHINKTDSAVRITHNPTGIVVQCQSGRSQHRNRADAMAMLKSRL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KR E     E +KT+IGWG QIRSYVL     +KDLRT +E  +   +LDGDLD
Sbjct: 241 YEAELRKRNEEKQAIEDTKTDIGWGHQIRSYVL-DQARIKDLRTGVESGNTQAILDGDLD 299

Query: 345 DFMKATLA 352
           DF++A+L 
Sbjct: 300 DFIEASLK 307


>gi|260460705|ref|ZP_05808955.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
 gi|259033282|gb|EEW34543.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
          Length = 322

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 220/309 (71%), Positives = 263/309 (85%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+  I+ +K +   L DN+ L+EL  EE D  ++ E    L+ ++ E + +Q E
Sbjct: 1   MRERQGLEEGIASVKGLTQALEDNIGLIELGEEEGDEGVIAEAEAALRSMQGEAKARQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGI
Sbjct: 61  TLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SE
Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERSQHKNKA+AW MLR++LY
Sbjct: 181 SDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE +AN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDD
Sbjct: 241 EEELKKREAVANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDD 300

Query: 346 FMKATLAIK 354
           FM+A+L+ +
Sbjct: 301 FMEASLSQR 309


>gi|326564766|gb|EGE14978.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1]
          Length = 304

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 172/302 (56%), Positives = 221/302 (73%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           LD  +  I  +  +L D   +LELA+E+DD S+L +    L      VE  +F  + SGE
Sbjct: 2   LDGIVGVIDGLSAKLDDAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT++
Sbjct: 62  MDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIM 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RID
Sbjct: 122 VKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R E     E SK++IGWG QIRSYVL     +KDLRT +E ++ + VL+GDLD F++A+L
Sbjct: 242 RMEKQQALEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVETSNTTAVLNGDLDKFIEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
 gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
          Length = 378

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 131/362 (36%), Positives = 209/362 (57%), Gaps = 9/362 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL    + +  + D     ++++ L  +   P LW +   A+ + +      + +  ++ 
Sbjct: 12  KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71

Query: 62  IQDRLCDNLILLELALEEDDCS--------ILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           ++ RL D   L+EL  EE            I+++     + +  ++   +  +LL+GE D
Sbjct: 72  MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
              A + + +GAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAGIKSAT  I 
Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P AYG L  E G HRL R+SP+++  +R TSF+++ V P+++ +  I++ ESD +ID +
Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L   ++E
Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLL-RHQQE 310

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                  +   +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+   +  
Sbjct: 311 HEKKKELAGDVKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDAFIDEGIRW 370

Query: 354 KK 355
           +K
Sbjct: 371 RK 372


>gi|319442594|ref|ZP_07991750.1| peptide chain release factor 2 [Corynebacterium variabile DSM
           44702]
          Length = 356

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 154/349 (44%), Positives = 214/349 (61%), Gaps = 9/349 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D D    R+  L  +  DP LW +   A+ +  +  H+ + +  ++ ++ RL D  ++
Sbjct: 1   MLDLDELDDRVRELEAQAADPSLWDDPDHAQQVTSQLSHVQSRLKKVRGLRSRLDDLPVM 60

Query: 73  LELALEEDDCSILQET------SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            E+A E       +           L  ++ ++E  +  ++LSGE D  +A + + + AG
Sbjct: 61  YEMADEAAVEDAAEGAEAKELADAELADLRADIESLEVTTMLSGEYDDREAVVNIRSAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ DWA ML+RMYTRWAEK   K E  +I   EEAGIKSAT ++ G   YG L  EQG
Sbjct: 121 GVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVHGDYMYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E+D R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAEVEVLPVVETSDHVDIDENDVRVDVYRSSGPGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTE 305
           DSAVR+THIPTG+VV CQ E+SQ +NKA A  +L AKL  LE +++EE A +        
Sbjct: 241 DSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKL--LERKRQEEAAEMDALRGDGS 298

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             WG Q+RSYVL PYQMVKDLRTN E   PS VLDG +D  ++A +  +
Sbjct: 299 NSWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGGIDGLLEAGIRWR 347


>gi|7388055|sp|P74476|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 372

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 145/351 (41%), Positives = 220/351 (62%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +L       D      ++  L      P  W +  +A+ +++      + +      
Sbjct: 15  ISSRLGQTQDYLDLPGLKAKVQDLEQCAAQPDFWDDTDQAQQILQTLNETKSQLEQWGIW 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q +  D+  ++EL   EDD ++L E    L++++ E++  + + LLSG  D+  A L ++
Sbjct: 75  QQQWQDSQAIVELLELEDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTIN 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDWA MLLRMYTRW+EK+ +K    EI +G+EAG+KS TL I+G  AYG+LK
Sbjct: 135 AGAGGTDAQDWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241
            E+G HRLVRISP+++N +R TSF+ + V P++ +++I ++I + D  I T RA G GGQ
Sbjct: 195 SEKGTHRLVRISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +       
Sbjct: 255 NVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E  WG QIR+YV  PYQ+VKDLRTN+E T    V+DG+L DF++A L 
Sbjct: 315 DMVEAAWGTQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLR 365


>gi|306843816|ref|ZP_07476414.1| peptide chain release factor 2 [Brucella sp. BO1]
 gi|306275894|gb|EFM57610.1| peptide chain release factor 2 [Brucella sp. BO1]
          Length = 321

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 204/309 (66%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L DN+ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINYLKQTLNDNVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 376

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 212/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADMQRLQK 72

Query: 62  IQDRLCDNLILLELALEE--DDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE  +D   IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L   ++E     
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLML-RHQQEHDKKK 311

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 312 ELAGDVKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|17987337|ref|NP_539971.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|62289859|ref|YP_221652.1| peptide chain release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82699784|ref|YP_414358.1| peptide chain release factor 2 [Brucella melitensis biovar Abortus
           2308]
 gi|189024100|ref|YP_001934868.1| peptide chain release factor 2 [Brucella abortus S19]
 gi|225627404|ref|ZP_03785441.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225852429|ref|YP_002732662.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237815350|ref|ZP_04594348.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|254689165|ref|ZP_05152419.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|254693648|ref|ZP_05155476.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|254697300|ref|ZP_05159128.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254706874|ref|ZP_05168702.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|254710017|ref|ZP_05171828.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|254714019|ref|ZP_05175830.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|254716923|ref|ZP_05178734.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|254719019|ref|ZP_05180830.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|254730198|ref|ZP_05188776.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|256031512|ref|ZP_05445126.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|256044588|ref|ZP_05447492.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256061021|ref|ZP_05451178.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|256113462|ref|ZP_05454303.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159637|ref|ZP_05457399.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|256254917|ref|ZP_05460453.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|256257415|ref|ZP_05462951.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|256264074|ref|ZP_05466606.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|260168645|ref|ZP_05755456.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|260545394|ref|ZP_05821135.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260563940|ref|ZP_05834426.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260754664|ref|ZP_05867012.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260757887|ref|ZP_05870235.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260761710|ref|ZP_05874053.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883690|ref|ZP_05895304.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|261213915|ref|ZP_05928196.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|261218729|ref|ZP_05933010.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261222099|ref|ZP_05936380.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|261314339|ref|ZP_05953536.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261317565|ref|ZP_05956762.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261321773|ref|ZP_05960970.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261325021|ref|ZP_05964218.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261758119|ref|ZP_06001828.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|265984009|ref|ZP_06096744.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|265988599|ref|ZP_06101156.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|265991013|ref|ZP_06103570.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994850|ref|ZP_06107407.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998064|ref|ZP_06110621.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|294852271|ref|ZP_06792944.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297248263|ref|ZP_06931981.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306840093|ref|ZP_07472879.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|17983020|gb|AAL52235.1| bacterial peptide chain release factor 2 (rf-2) [Brucella
           melitensis bv. 1 str. 16M]
 gi|62195991|gb|AAX74291.1| peptide release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82615885|emb|CAJ10889.1| Class I peptide chain release factor domain:Peptide chain release
           factor 2:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189019672|gb|ACD72394.1| Peptide chain release factor 2 [Brucella abortus S19]
 gi|225617409|gb|EEH14454.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225640794|gb|ACO00708.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237790187|gb|EEP64397.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|260096801|gb|EEW80676.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260153956|gb|EEW89048.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260668205|gb|EEX55145.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260672142|gb|EEX58963.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674772|gb|EEX61593.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260873218|gb|EEX80287.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|260915522|gb|EEX82383.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|260920683|gb|EEX87336.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|260923818|gb|EEX90386.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261294463|gb|EEX97959.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261296788|gb|EEY00285.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261301001|gb|EEY04498.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261303365|gb|EEY06862.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261738103|gb|EEY26099.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|262552532|gb|EEZ08522.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|262765963|gb|EEZ11752.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001797|gb|EEZ14372.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094278|gb|EEZ18139.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|264660796|gb|EEZ31057.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|264662601|gb|EEZ32862.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|294820860|gb|EFG37859.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297175432|gb|EFH34779.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306404821|gb|EFM61114.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|326408941|gb|ADZ66006.1| Peptide chain release factor 2 [Brucella melitensis M28]
 gi|326538654|gb|ADZ86869.1| peptide chain release factor 2 [Brucella melitensis M5-90]
          Length = 321

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 376

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 212/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72

Query: 62  IQDRLCDNLILLELALEE--DDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE  +D   IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L   ++E     
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLML-RHQQEHDKKK 311

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 312 ELAGDVKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
 gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
          Length = 322

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 249/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +++ E+ + L+ ++ EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMY RWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
 gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
          Length = 358

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 146/342 (42%), Positives = 215/342 (62%), Gaps = 1/342 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD       +  L      P  W +   A+  ++E   L + +   +    +L D   + 
Sbjct: 12  FDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTKAIA 71

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   EDD ++ QE  +N+ ++   ++  + + LLSG  D+  A L ++AGAGGT++QDW
Sbjct: 72  ELLELEDDTTLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGTDAQDW 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRW E++ +K +  E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRLVRI
Sbjct: 132 AQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+++N +R TSF+ + V P + +D +++EI + D  I T R+ G GGQ+VN  ++AVR+
Sbjct: 192 SPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETAVRV 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          +  WG QI
Sbjct: 252 VHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVDAAWGNQI 311

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           R+YV  PYQMVKDLRTNIE T  + V+DG LD F++A L   
Sbjct: 312 RNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYLRYD 353


>gi|326798108|ref|YP_004315927.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
 gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
          Length = 361

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 152/351 (43%), Positives = 221/351 (62%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   L    D D   + ++     T  P  W +  EA+ +++  +          E
Sbjct: 8   ELRDRAASLRRHLDIDAKQKEINQEQEITLKPDFWDHPKEAEKVLQSIKSKKVWTDSFDE 67

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D  ++ +     D     QE  +  Q     VE  +F+++LS E D   A L++
Sbjct: 68  LLQAIDDASVMFDFYQSGDASE--QEADELFQEALKRVEELEFKNMLSAEEDQLTAILQI 125

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA ML+RMY  W EK  +K    +  +G+ AG+KS TL   G  AYG+L
Sbjct: 126 TAGAGGTESCDWAAMLMRMYIMWGEKNGYKVTEQDFLEGDVAGVKSVTLQFDGNFAYGYL 185

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIE+ +SD   DT+R+ GAGGQ
Sbjct: 186 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEVKDSDIEWDTFRSGGAGGQ 245

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H P+G+V++ Q+ RSQ +NK  A  +L+++LYE+E++KR E     E 
Sbjct: 246 NVNKVETAVRLHHKPSGIVIKNQESRSQLQNKDNAMRLLKSQLYEIEMRKRMETTAAIEG 305

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SK +I WG QIR+YVL PY++VKDLRT  E ++   VLDG+LD+F+K+ L 
Sbjct: 306 SKKKIEWGSQIRNYVLHPYKLVKDLRTGHETSNTQAVLDGELDEFLKSYLM 356


>gi|257125766|ref|YP_003163880.1| peptide chain release factor 2 [Leptotrichia buccalis C-1013-b]
 gi|257049705|gb|ACV38889.1| bacterial peptide chain release factor 2 (bRF- 2) [Leptotrichia
           buccalis C-1013-b]
          Length = 364

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 163/345 (47%), Positives = 221/345 (64%), Gaps = 2/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
               D +N    +  L  +T +P  W     ++ +++        +     +     D  
Sbjct: 21  RRHLDLENLKIEIENLEKQTFEPDFWN-AENSQEILKNISAKKKMLEEYDNLNGLFEDVS 79

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            ++E   E  D S   E     ++++ E++  + + LL  E D+N+A L +++GAGGTE+
Sbjct: 80  TIIEFI-EMGDNSFENELEQKAKKLENEIDNFKTKLLLDEEYDTNNAILTINSGAGGTEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IKG  AYG+LKGE+GVHRL
Sbjct: 139 CDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKGSYAYGYLKGEKGVHRL 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN+RRHTSF+++ V P ++D +EI I   D +IDTYRASGAGGQHVNTTDSAV
Sbjct: 199 VRISPFDSNARRHTSFAAVNVTPEIEDDVEINIRTEDLKIDTYRASGAGGQHVNTTDSAV 258

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE+     + ++++I WG 
Sbjct: 259 RITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTESKIEWGS 318

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 319 QIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYSK 363


>gi|153854560|ref|ZP_01995830.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
 gi|149752869|gb|EDM62800.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
          Length = 312

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 154/307 (50%), Positives = 215/307 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E ++L   +  I  +     D  +L+E+  E++D ++++E  + +   +   E  + +
Sbjct: 1   MKELKNLKELVETIHGLYTSYEDINLLIEMGYEDEDPAMVKELEEEIHTFEKVFEKLKIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA ML RMY RWAE++ F  + L+  DG+ AGI
Sbjct: 61  TLLSGEYDACNAIMTIHAGAGGTESCDWAGMLYRMYCRWAERKGFSLQVLDFLDGDIAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  +KG NAYG+LK E+GVHRLVRISP++S  +R TSF+S  V P ++D I+IEI E
Sbjct: 121 KAVTFEVKGENAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVLPDLEDDIDIEIDE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+AKL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       +IG+G QIRSYV+QPY +VKD RTN E ++ + V+DGD+D 
Sbjct: 241 LMKEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNEENSNVNAVMDGDIDS 300

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 301 FINAYLK 307


>gi|15602055|ref|NP_245127.1| peptide chain release factor 2 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12720411|gb|AAK02274.1| PrfB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 320

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 168/318 (52%), Positives = 226/318 (71%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W    +A+ L +ER  L+  ++ I  +   L D   LLELA+E +D +   E    L+ +
Sbjct: 2   WNEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELAIEAEDEATFHEAVAELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +
Sbjct: 62  EQQLAKLEFRRMFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ DG+ AGIKSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +
Sbjct: 122 EVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q
Sbjct: 182 DDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
               L+AKLYE+ELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 CMKQLKAKLYEMELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDRFIEASLKA 318


>gi|45656368|ref|YP_000454.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798054|sp|Q72V33|RF2_LEPIC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|45599602|gb|AAS69091.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 367

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 166/351 (47%), Positives = 229/351 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L         L + +    RL  L  K EDP+LW N  EA+++ +++  L+  ++    
Sbjct: 15  ELQENFLNRWKLLNLEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFT 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + D   L++L L+E   + + E S    R++ + E  +    L    D   A+L +
Sbjct: 75  IQQDILDFPDLVDLTLDEKGENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMYTR+ EK+ ++   +++  G+ AGIK+ATL + G  A+G+L
Sbjct: 135 HPGAGGTESQDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ
Sbjct: 195 KGENGVHRLVRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+  A+ ML+A+LYELE +K +E       
Sbjct: 255 HVNTTDSAVRITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYV  PY +VKD RT+ E  + + V+DGD++ F+ A L 
Sbjct: 315 EKKDITWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|258645336|ref|ZP_05732805.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
 gi|260402685|gb|EEW96232.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
          Length = 330

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 215/326 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W+N   AK + ++      A      +  R      LL++A+EE+D  +  E  
Sbjct: 1   MSDPSFWENGDHAKEISQKATEAKAAYDTYTRLFARAESIKELLDMAIEENDQDMEGELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +K  ++ K+ E LL+ E D+NDA +  HAGAGGTE+QDW  ML+RMY +WAE   
Sbjct: 61  EEINELKDILDKKEIELLLNDEYDANDAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L +  G+EAG+KSA  +++G  AYG LK E+GVHRLVRISP+D+  RRHTSFS++
Sbjct: 121 FVLEELNMLPGDEAGVKSAEYMVRGKFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D IEI+++ +D R+D YRASGAGGQH+N T SAVR+THIPTG+V  CQ ERSQ
Sbjct: 181 DVMPEIGDDIEIDLNMADVRVDYYRASGAGGQHINKTSSAVRMTHIPTGIVAACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK Q   +L+AKL+ELE+QKRE++    E  +  I WG QIRSYV QPY +VKD RT 
Sbjct: 241 FQNKEQCLRLLKAKLFELEMQKREQVKKGIEGEQQAIEWGSQIRSYVFQPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           IE  +   V+DG L+ F++  L  KK
Sbjct: 301 IETGNIQSVMDGGLNPFIEGFLKHKK 326


>gi|24216466|ref|NP_713947.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798086|sp|Q8EZT4|RF2_LEPIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|24197768|gb|AAN50965.1| peptidyl-tRNA hydrolase involved in peptide chain release
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 367

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 166/351 (47%), Positives = 229/351 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L         L + +    RL  L  K EDP+LW N  EA+++ +++  L+  ++    
Sbjct: 15  ELQENFLNRWKLLNLEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFT 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + D   L++L L+E   + + E S    R++ + E  +    L    D   A+L +
Sbjct: 75  IQQDILDFPDLVDLTLDEKGENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMYTR+ EK+ ++   +++  G+ AGIK+ATL + G  A+G+L
Sbjct: 135 HPGAGGTESQDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ
Sbjct: 195 KGENGVHRLVRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+  A+ ML+A+LYELE +K +E       
Sbjct: 255 HVNTTDSAVRITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYV  PY +VKD RT+ E  + + V+DGD++ F+ A L 
Sbjct: 315 EKKDIAWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|302766928|ref|XP_002966884.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
 gi|300164875|gb|EFJ31483.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
          Length = 427

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 227/350 (64%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +R +  +     W + + +L  L  + E P LW +   A    RE   L + +  I+E++
Sbjct: 73  ARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREME 132

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +N+ L+ELA EE D  +  E    L  ++   + K+  +LL  E D    +LEV A
Sbjct: 133 SELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQA 192

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ES D+A MLLRMY  WA +R F+   ++   G+ AGIK ATL ++G  AYG+ K 
Sbjct: 193 GAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAKT 252

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+D   RRHTSF+++ V P++D++  EIEI+E+D  ID +R+SGAGGQH
Sbjct: 253 EAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQH 312

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSA+RI H PTG+ VQCQ ERSQHKNK  A  +LR++LY+LEL+++ E       S
Sbjct: 313 VNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQS 372

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             EI WG QIRSYVLQPYQ+VKDLRT  E T+P+ VLDG LD F+   L+
Sbjct: 373 LHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422


>gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063]
 gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063]
          Length = 376

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 212/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72

Query: 62  IQDRLCDNLILLELALEE--DDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE  +D   IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILVDAEQTYETLKRDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L   ++E     
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLML-RHQQEHDKKK 311

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 312 ELAGDVKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|307243612|ref|ZP_07525755.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492981|gb|EFM64991.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
          Length = 348

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 160/346 (46%), Positives = 230/346 (66%), Gaps = 3/346 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
             FD      R   +     +   W++  ++  +++E + ++  ++   ++   + D  I
Sbjct: 2   SHFDLKGLESRKVDIEKLMAEQDFWEDTDKSNKILQENKTIEVRLTQYSQLITSIEDINI 61

Query: 72  LLELALE---EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           LLEL+ E   E+D  I     D ++  +  ++    E L SG+ DSN+A L V++G GG 
Sbjct: 62  LLELSEEDSTEEDQEIENSIIDQVKDARENLDRMTMEMLFSGQYDSNNAILSVNSGTGGL 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDWA MLLRMY RW+E   +K + ++I+   EAGIK+AT+L++G NAYG LK E+GVH
Sbjct: 122 DAQDWAQMLLRMYIRWSESSGYKVKLIDINSDPEAGIKTATILVQGQNAYGHLKSEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS+ +RHTSF+SI V P +++ I++EI+++D +IDTYR+SGAGGQHVNTTDS
Sbjct: 182 RLVRISPFDSSGKRHTSFASIDVVPELNEDIKVEINQTDLKIDTYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+VVQCQ ERSQH NK  A  +L AKL +L+ ++ +E     +   ++I W
Sbjct: 242 AVRITHIPTGIVVQCQNERSQHSNKDIAMKLLMAKLIQLKEEENKERIEDLQGKYSQITW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV QPY++VKD RTN E  +   V+DG LD+FM   L  K
Sbjct: 302 GSQIRSYVFQPYKLVKDHRTNEENANVDAVMDGKLDNFMFEYLKQK 347


>gi|114326944|ref|YP_744101.1| peptide chain release factor 2 [Granulibacter bethesdensis CGDNIH1]
 gi|114315118|gb|ABI61178.1| bacterial peptide chain release factor 2 (RF-2) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 323

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 187/303 (61%), Positives = 238/303 (78%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRER  L + +  +  ++  + D   L E+A  + D ++  +    L+ I  E +  + 
Sbjct: 1   MMRERTRLASQVEGVLRMESEVSDATELAEMAEADGDEAMATDARRMLETIAAEAKRLEI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ESLLSGEAD NDAYLE+++GAGGTE+QDWA MLLRMYTRWAE   +K   +E  DGE+AG
Sbjct: 61  ESLLSGEADGNDAYLEINSGAGGTEAQDWAEMLLRMYTRWAEAHGYKVTLIEQSDGEQAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSATL + GP+AYGWLK E GVHRLVRISP+DS +RR TSF+SIWVYPVVDD+IEIEI+
Sbjct: 121 IKSATLQVAGPSAYGWLKTEAGVHRLVRISPFDSAARRQTSFASIWVYPVVDDNIEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A NML+A+L
Sbjct: 181 EADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQTDRSQHRNRATAMNMLKARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE ELQKRE  A   E++K+EIGWG QIRSYVL PYQ+VKDLRTN+EK +P  VLDGDLD
Sbjct: 241 YEAELQKREAAAQEQENAKSEIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPGAVLDGDLD 300

Query: 345 DFM 347
           +FM
Sbjct: 301 EFM 303


>gi|115524982|ref|YP_781893.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisA53]
 gi|115518929|gb|ABJ06913.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisA53]
          Length = 322

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 252/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++  I +++  L DN+ ++EL   E D S++ E    L+++K +V  ++ E
Sbjct: 1   MQERTSLEDSLDGIGKVERELDDNVGMIELGEAEGDDSVVAEAEAALKKLKKDVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+ ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSVQIFPVVDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKNKAQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|86750123|ref|YP_486619.1| peptide chain release factor 2 [Rhodopseudomonas palustris HaA2]
 gi|86573151|gb|ABD07708.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris HaA2]
          Length = 322

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E D  +++E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAEGDEGVVREAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|49475632|ref|YP_033673.1| peptide chain release factor 2 [Bartonella henselae str. Houston-1]
 gi|49238439|emb|CAF27667.1| Peptide chain release factor 2 [Bartonella henselae str. Houston-1]
          Length = 322

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 211/310 (68%), Positives = 258/310 (83%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRERQ LD++I+ I+     L + + L+ +  EE D  I+ +  ++++ +K E++ +Q 
Sbjct: 1   MMRERQRLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDKRQI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           ++LLSGEAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG
Sbjct: 61  DALLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSATLL+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++S
Sbjct: 121 IKSATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVS 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L
Sbjct: 181 EADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRAIAWSMLRARL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD
Sbjct: 241 YEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLD 300

Query: 345 DFMKATLAIK 354
            F++A LA +
Sbjct: 301 SFIEAALARR 310


>gi|161618874|ref|YP_001592761.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|254704223|ref|ZP_05166051.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|260566529|ref|ZP_05836999.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261754891|ref|ZP_05998600.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|161335685|gb|ABX61990.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|260156047|gb|EEW91127.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261744644|gb|EEY32570.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
          Length = 321

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|302325967|gb|ADL25168.1| peptide chain release factor 2 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 389

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 144/341 (42%), Positives = 220/341 (64%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD +   + L  L   + DP+LW +  +A+ +M++  +L   I   KE+     D  
Sbjct: 42  GGIFDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWKEVSQTCDDLA 101

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ +E+   +      ++  +K  VE  +F+ +L+G  D+    + +H GAGGTES
Sbjct: 102 ELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMSIHPGAGGTES 161

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMYT + E+ K   + ++  + E+AG+KSAT+ +   NAYG L+ E GVHRL
Sbjct: 162 QDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGLLRSEIGVHRL 221

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N+RRHTSF+++++YP   + +E ++  S+ R+DTYR+SGAGGQ++N TDSAV
Sbjct: 222 VRISPFDANARRHTSFTAVYLYPE-HEDVEFDLDMSEVRVDTYRSSGAGGQYINKTDSAV 280

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTG++  CQ ERSQ +N+   + ML+  + E    + E   +   + K ++ WG 
Sbjct: 281 RMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDARMAEKKKVEWGS 340

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVLQPYQ+VKDLRT +E +  + VLDG +  F+ A L
Sbjct: 341 QIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 381


>gi|160947120|ref|ZP_02094287.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
 gi|158446254|gb|EDP23249.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
          Length = 349

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 150/339 (44%), Positives = 211/339 (62%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD          L +++     W +   AK ++   ++L   I     +  ++ D++  
Sbjct: 3   HFDISKLEDEYKNLESQSFKEDFWNDSKSAKSILDNMKNLKFKIETFTSLSRKIEDSIEF 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LE+  +E+     +E   N+  I+ E    +  +L+ GE DSN+A LE+HAGAGGT++QD
Sbjct: 63  LEILSDEEFMEYEKEALKNIYNIEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQD 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML R+YTRW   + F    L+ +   E GIKS TL + G NAYG+LKGE+GVHRLVR
Sbjct: 123 WTEMLQRLYTRWINSKGFSFSILDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVHRLVR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISPYDS+++RHTSF+S+ V+P +++  +IEI+  D RIDTYR+ GAGGQHVN TDSAVRI
Sbjct: 183 ISPYDSSNKRHTSFASVDVFPEIEEITDIEINPKDLRIDTYRSGGAGGQHVNKTDSAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTGV V CQ ERSQ  N+  A   L AKL  ++ ++  E     +   ++I WG QI
Sbjct: 243 THIPTGVTVSCQSERSQMFNRDTAMRQLIAKLLIIKQEENREKIEDIQGKYSQIAWGSQI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV QPY +VKD RT  E  +   V++G++D+F+   L
Sbjct: 303 RSYVFQPYTLVKDHRTGYETGNVESVMNGNIDEFINQYL 341


>gi|302755404|ref|XP_002961126.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
 gi|300172065|gb|EFJ38665.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
          Length = 427

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 227/350 (64%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +R +  +     W + + +L  L  + E P LW +   A    RE   L + +  I+E++
Sbjct: 73  ARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREME 132

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +N+ L+ELA EE D  +  E    L  ++   + K+  +LL  E D    +LEV A
Sbjct: 133 SELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQA 192

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ES D+A MLLRMY  WA +R F+   ++   G+ AGIK ATL ++G  AYG+ K 
Sbjct: 193 GAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAKT 252

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+D   RRHTSF+++ V P++D++  EIEI+E+D  ID +R+SGAGGQH
Sbjct: 253 EAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQH 312

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSA+RI H PTG+ VQCQ ERSQHKNK  A  +LR++LY+LEL+++ E       S
Sbjct: 313 VNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQS 372

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             EI WG QIRSYVLQPYQ+VKDLRT  E T+P+ VLDG LD F+   L+
Sbjct: 373 LHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422


>gi|118467007|ref|YP_883159.1| peptide chain release factor 2 [Mycobacterium avium 104]
 gi|166225107|sp|A0QJS1|RF2_MYCA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118168294|gb|ABK69191.1| peptide chain release factor 2 [Mycobacterium avium 104]
          Length = 370

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 217/354 (61%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       +   + ++ ++E  +  +LLSGE D  +A + 
Sbjct: 72  RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  +
Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDALK 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 GEGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364


>gi|317507095|ref|ZP_07964856.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316254589|gb|EFV13898.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 372

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 153/356 (42%), Positives = 216/356 (60%), Gaps = 4/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L+ +    D       ++ L ++  DP LW++    + +          +  +  +
Sbjct: 12  LSATLSTVESALDLSKLEAEIADLESQAADPSLWEDQDRGQEVTSGLARRQATLRAVTAL 71

Query: 63  QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA ++   +    L E     + ++ ++E  +  +LL+GE D  +A +
Sbjct: 72  RSRLDDLHVLYELAEDDSGAEGQEALAEADAERKALREDIETLEVRTLLNGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K   E  +I   EEAGIKSAT  +K   AYG
Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEIYDISYAEEAGIKSATFAVKSAYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV  +  IEI ES+ R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIEIPESEVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTGVVV CQ E+SQ +NK  A  +L+AKL E   Q+ +E  N  
Sbjct: 252 GQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKLSAMRVLQAKLLERRRQEEQEQLNAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +       WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F+++ +  ++
Sbjct: 312 KGDGGS-SWGTQMRSYVLAPYQMVKDLRTEYEVGNPTTVLDGDIDGFLESGIRWRR 366


>gi|187932243|ref|YP_001892228.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713152|gb|ACD31449.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 325

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 171/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I   L     LLEL  E  D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKE--DESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|283778052|ref|YP_003368807.1| peptide chain release factor 2 [Pirellula staleyi DSM 6068]
 gi|283436505|gb|ADB14947.1| bacterial peptide chain release factor 2 (bRF- 2) [Pirellula
           staleyi DSM 6068]
          Length = 398

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ ++++ L G  D+D   ++  FL  +   P  W    +A  ++ + + L   ++ +  
Sbjct: 33  KIQQRVDQLRGSLDYDGKKKQFEFLEARMSQPDFWNVQEKALEVVSQVKSLKAILAPLDA 92

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I +   D   +L++A   DD S   +    ++RI+ +++  + ++LL+G  D+  A + +
Sbjct: 93  IVNSASDLPGMLDMAG--DDESFAADLRAEIERIEKQLDDLELKALLNGPLDNVGAIVTI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HA  GGT++ DWA MLLRMY  WA+K  ++ +  E  + + AGI +ATL+I+GP AYG+L
Sbjct: 151 HARDGGTDASDWAEMLLRMYIGWAQKNGYEYKVTERDEADVAGISAATLVIRGPMAYGYL 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVRISP++S  +R TSF+++ V P + D  E+ I++ D R DTYRA GAGGQ
Sbjct: 211 KGESGHHRLVRISPFNSEGKRQTSFAAVDVLPEIADDFEVVINKEDIREDTYRAGGAGGQ 270

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+TH P+G+VVQCQ ERSQH N+A A+ MLRA+L   E ++RE  +     
Sbjct: 271 HVNKTESAVRLTHFPSGIVVQCQNERSQHSNRATAYKMLRARLARAEEERREAESASKYK 330

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           S  ++G+G QIR+Y L P Q VKD RT   +     VLDG+L  F+ + L  +
Sbjct: 331 SAAKVGFGSQIRNYFLHPTQRVKDSRTGYSEGDFHSVLDGNLQGFIDSVLKWR 383


>gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
 gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
          Length = 376

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 212/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQVDMQRLQK 72

Query: 62  IQDRLCDNLILLELALEE--DDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE  +D   IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEEAGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L   ++E     
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLML-RHQQEHDKKK 311

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 312 ELAGDVKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|320531255|ref|ZP_08032234.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136522|gb|EFW28491.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 373

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 145/357 (40%), Positives = 217/357 (60%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D   ++ELA EE+     +  ++    L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAEADLSAISKDLSELEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+ ++  + L     EEAG+KS T  I  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEIHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+  + E+    
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|167761288|ref|ZP_02433415.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
 gi|167660954|gb|EDS05084.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
          Length = 312

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 153/307 (49%), Positives = 216/307 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E +HL   +  I+ +     D  +L+E+  E++D S+ +E  + ++  +   E  + +
Sbjct: 1   MKELKHLKELVETIQNLYASYDDINLLIEMGYEDEDPSMAREIEEEIRGFETSYEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA+ML RMY+RWAE++ F  + L+  DG+ AGI
Sbjct: 61  TLLSGEYDACNAIVTIHAGAGGTESCDWASMLYRMYSRWAERKGFTIQVLDYLDGDIAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IEI++
Sbjct: 121 KTVTFEVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+ KL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKVKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       EIG+G QIRSYV+QPY MVKD RTN+E ++   V+DG +D 
Sbjct: 241 LMKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNVENSNVGAVMDGSIDM 300

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 301 FINAYLK 307


>gi|189499218|ref|YP_001958688.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
 gi|189494659|gb|ACE03207.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
          Length = 363

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 154/349 (44%), Positives = 227/349 (65%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  LN  GG+FD D  + ++  L   T + + W+N  EA  +++E             ++
Sbjct: 12  TTALNSYGGIFDVDERLHKIGELEQITTEENFWENQQEANKIVKEINDHKLWTEGFLALE 71

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D    LE+A E  + S+ +E    +  I+ ++   +F+++LSG+ D  +A L ++A
Sbjct: 72  KQTADLREELEIAEELGEESLAEEIDSRIGSIEQKIAEIEFKNMLSGKDDPGNALLTINA 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK 
Sbjct: 132 GAGGTEAQDWAEMLYRMYLRWAERKGFKIFTDDYQEGDGAGIKTATLEIQGPYAYGYLKA 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+DSN+RRHTSF+S++ YP      EIEI + D  + T+R+ G GGQ+V
Sbjct: 192 ENGVHRLVRVSPFDSNARRHTSFASVYSYPEAPPDAEIEIRKEDLELSTFRSGGKGGQNV 251

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++AVRI HIP+G+VV CQQERSQ +N+ +A  MLRA+LY+ + ++ E      E +K
Sbjct: 252 NKVETAVRIKHIPSGIVVSCQQERSQFQNRERATKMLRAQLYKKQREEEEARKQAVEGTK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +I WG QIRSYV+   + +KD RTN E+    +VLDGD+DDF++  L+
Sbjct: 312 KKIEWGSQIRSYVMDD-RRIKDHRTNYERHDIENVLDGDIDDFIEKYLS 359


>gi|302391071|ref|YP_003826891.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
 gi|302203148|gb|ADL11826.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
          Length = 366

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 237/353 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D+D   ++   L  +   P  W +   A+ + +E   L + +     +
Sbjct: 12  LKGELAELRVSLDYDKLEEKHDQLRAEMSKPGFWDDSSRAQQISKEASALKDMMESFDRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++RL +  +L+EL  EEDD S+ +E  D LQ ++ ++E  + + ++ GE D N A L ++
Sbjct: 72  EERLEEIEVLIELGQEEDDDSVTEEIKDKLQGLEEDIEELELKVVMDGEYDQNSALLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGG +SQDWA MLLRMY RWAEK+ ++ E LE   GEEAGIKS TL I GP AYG+LK
Sbjct: 132 PGAGGIDSQDWAEMLLRMYNRWAEKKDYQIETLEFMAGEEAGIKSVTLQINGPYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHR+VR+SP+DS+ RRHTSF+S+ V P ++D I+I+I ++D +I+TYRASGAGGQH
Sbjct: 192 AEKGVHRMVRVSPFDSSGRRHTSFASVEVLPEIEDDIDIDIEKNDLKIETYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VVQCQ  RSQHKN+ +A  +L+AKL++   +K+ E  +     
Sbjct: 252 VNTTDSAVRITHQPTGIVVQCQSLRSQHKNRQKAMQILKAKLFDYMKEKQAEKLSEIRGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K +I WG QIRSY   PYQ++KD RTN+E  +   V+DG+LD  ++A L   K
Sbjct: 312 KKDISWGSQIRSYFFDPYQLIKDHRTNLEINNIEAVMDGELDPLIEAYLKETK 364


>gi|261491637|ref|ZP_05988220.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261494996|ref|ZP_05991465.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309405|gb|EEY10639.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261312763|gb|EEY13883.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 304

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 161/302 (53%), Positives = 211/302 (69%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  ++ IK ++  + D   L+ELA+E +D     E       ++ ++   +F+ + SG 
Sbjct: 2   LEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVEADELEKKLADLEFKRMFSGP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            DS D YL++ AG+GGTE+QDW  MLLRMY RWAE + FK E +E  DG+ AGIKSAT+ 
Sbjct: 62  HDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKAELMEASDGDVAGIKSATVK 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  AYGW + E G+HRLVR SP+D+N+ RHTSFS+ +VYP VDD I+IEI+ +D RID
Sbjct: 122 ISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFSAAFVYPEVDDDIDIEINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYELE+ K
Sbjct: 182 VYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYELEMSK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       E +K++IGWG QIRSYVL     +KD RT +E  +   VLDGDLD F++A+L
Sbjct: 242 KNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDHRTGVEHRTTQQVLDGDLDKFVEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 322

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 187/302 (61%), Positives = 242/302 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L   +  ++ ++  + D L L+ELA  E D ++L++    L+ +  E + ++ E
Sbjct: 1   MRERTLLAGQVEGVQRLEADVRDTLDLVELAEMEGDDAVLKDAVQMLRALAEEAKRRETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEADSND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AG+
Sbjct: 61  SLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVALMESSEGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEIEI+E
Sbjct: 121 KSATIQVTGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D ++DT+RASGAGGQHVN T+SA+RITHIPTG++V CQ +RSQH+N+A A  ML+A++Y
Sbjct: 181 ADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+RE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRT++E+ +P  VLDGDLDD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTSVERGNPDAVLDGDLDD 300

Query: 346 FM 347
           FM
Sbjct: 301 FM 302


>gi|139438906|ref|ZP_01772366.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
 gi|133775617|gb|EBA39437.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
          Length = 382

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 149/353 (42%), Positives = 205/353 (58%), Gaps = 5/353 (1%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L  +      D    R+S L  K+  P  W +   A+  M E       I+ +   +  
Sbjct: 18  RLGEVESYLHLDEKRTRVSELEAKSVAPGFWDDADAARATMEEIARTKEDIAAVDTARGE 77

Query: 66  LCDNLILLELALEEDDC----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           L D    LELA E  D     ++ +E +   +R+   ++  +  S  +GE D  DA + +
Sbjct: 78  LSDARAALELAEEMGDDPDAAALREEAAATAERLARAIDELELSSWFTGEFDHGDAIVTI 137

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             G GG E+QDW  ML +MY ++ ++R +K    +    E  GI  AT  ++G +A+G L
Sbjct: 138 KPGQGGLEAQDWTFMLFKMYMKYCQRRGWKVTINDCPAAEVIGIDRATFTVEGKDAFGML 197

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP D   RR T+F+ + V PV+ D I+IEIS  D R+D Y ASG GGQ
Sbjct: 198 RAEAGVHRLVRISPTDDKRRRQTTFAGVEVIPVLPDDIDIEISPDDIRVDVYHASGPGGQ 257

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH P+G+VV CQ ERSQ +NKA    +L+A+LYE+EL+KR E  +    
Sbjct: 258 GVNTTDSAVRVTHFPSGIVVTCQNERSQIQNKAACMQILKARLYEIELEKRAEALDEIRG 317

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
            KT IG+G QIRSYVL PYQMVKDLR+ +E ++   VL DGDLD F+      
Sbjct: 318 PKTTIGFGNQIRSYVLYPYQMVKDLRSGVETSNVEAVLDDGDLDPFVIGYHRW 370


>gi|42522998|ref|NP_968378.1| hypothetical protein Bd1489 [Bdellovibrio bacteriovorus HD100]
 gi|39575203|emb|CAE79371.1| prfB [Bdellovibrio bacteriovorus HD100]
          Length = 321

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 164/310 (52%), Positives = 219/310 (70%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L +E+  L+ A+        RL D+ +LLE+A E  D     E    +  ++   E  
Sbjct: 2   QKLNKEKALLEKAVGEFDAFASRLSDSKVLLEMAEEAQDEGSFSEAKAEVVALEKLGEEL 61

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + + +L+GE DSN +YL +++GAGGTES DWA+MLLRMYTR+A+K  FK + +E+ +GE 
Sbjct: 62  ELKRVLNGELDSNSSYLSINSGAGGTESCDWASMLLRMYTRYADKHGFKVQIIEMTEGEG 121

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AGIKS TLLI+GP AYG+LK E GVHRLVRISP+DSN+RRHTSF+S++ +  VDD I IE
Sbjct: 122 AGIKSCTLLIEGPYAYGYLKAESGVHRLVRISPFDSNARRHTSFASVFAWAEVDDDINIE 181

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +   D ++DT+RASGAGGQHVN TDSAVR+THIP+GV+V CQ ERSQ +N+ +A  ML+A
Sbjct: 182 VRPDDLKVDTFRASGAGGQHVNRTDSAVRMTHIPSGVIVTCQVERSQIQNREKALKMLKA 241

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +LYE+E++KR    +   S K    WG QIRSYV+ PYQMVKD RT+ E     DV+DGD
Sbjct: 242 RLYEMEIEKRNAEKDAMNSQKKANEWGSQIRSYVMHPYQMVKDHRTDFETNQVDDVMDGD 301

Query: 343 LDDFMKATLA 352
           LD F+ + L 
Sbjct: 302 LDGFIMSYLK 311


>gi|296122601|ref|YP_003630379.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
 gi|296014941|gb|ADG68180.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
          Length = 372

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 156/357 (43%), Positives = 227/357 (63%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  L    D+D    R++ +N     P  W +  +A+ L+ E ++++ ++  ++E
Sbjct: 11  ELTSRILQLRDSLDYDQWQARVAEINEAMSAPDFWDHQEKAQALVTELRNVNGSLKPLQE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D   +  +L E   E+D      E    L  ++ + +  + ++++S   D   AYL++
Sbjct: 71  LIDGTEELAVLREFLAEDDSSESRDEMVGLLASLQEKFQQVELKAMMSRPEDPCSAYLQI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GGT++ DWA MLLRMYTRWAE R F+TE +EI + EEAGI++ATL I+G   YG L
Sbjct: 131 QAGEGGTDASDWAAMLLRMYTRWAEDRGFETELIEISEAEEAGIRNATLAIRGEYVYGLL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS---ESDCRIDTYRASGA 238
           +GE GVHRL+RISP+D   RR TSF+++ V P  DD+I+I+I+       R D +RASGA
Sbjct: 191 RGETGVHRLIRISPFDGAGRRQTSFAAVDVIPEPDDTIDIDINWEDPKIIREDIFRASGA 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SA+R+TH+PT  VVQCQ ERSQHKN++    ML AKL +LE  KRE  A  
Sbjct: 251 GGQHVNKTSSAIRLTHLPTNTVVQCQNERSQHKNRSWCRKMLVAKLLQLETVKRENEAAH 310

Query: 299 GESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K++IG+ G  IR+YVL P Q VKD RTN++  +P  VLDG +D+F++A L   
Sbjct: 311 KRGQKSKIGFGGETIRNYVLNPEQFVKDTRTNLKVGTPMPVLDGRIDEFLEAYLRWD 367


>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
          Length = 369

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 173/341 (50%), Positives = 236/341 (69%), Gaps = 1/341 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  +  + L  ++      + W++  +AK + + R+ L+  I   + I+  L   L  L
Sbjct: 23  MDISSMKEELKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTLE-TLQEL 81

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              ++E+D   L   ++ +Q ++  +   + ++ LS E D N+AYL V AGAGGTE+ DW
Sbjct: 82  LEEVDEEDLETLSMIAEEIQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAGGTEACDW 141

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLRMY RWAEK  ++ E ++I+  + AGIKSATLLIKGP AYG+LKGE GVHRLVRI
Sbjct: 142 ASMLLRMYRRWAEKHGYEVEVIDINPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRI 201

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+N+RRHTSF+S+ V P +D+ I IEI E D +++T+RASGAGGQ+VN TD+AVRI 
Sbjct: 202 SPFDANARRHTSFASVSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRIR 261

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQQERSQ +N+ +A  +L+AKLY+LELQK EE     E  KT+IGWG QIR
Sbjct: 262 HIPTGITVSCQQERSQFQNRLKALELLKAKLYQLELQKLEEKKKALEGEKTDIGWGYQIR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SYV QPYQMVKDLRT +E  +   V+DGD+D F++  L  K
Sbjct: 322 SYVFQPYQMVKDLRTGLEVGNVDAVMDGDIDSFIEEYLRWK 362


>gi|225020766|ref|ZP_03709958.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946468|gb|EEG27677.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 368

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 216/353 (61%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + +  +   R   L  K  DP LW +   A+ +  E   +   +  ++ +
Sbjct: 12  LDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  I+    L E++        + L  ++ +++  +  ++LSGE DS +A + + 
Sbjct: 72  RSRLTDLPIMY--ELAEEEGEGADIADEELADLRADIDALEVTTMLSGEYDSREALINIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK+  K E  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I +S+ R+D YR+SG GGQ 
Sbjct: 190 VEQGVHRLVRISPFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E +  + E        +
Sbjct: 250 VNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKR-QEERAELDALGA 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+R+YVL P+QMVKDLRT  E   P  VLDGDLD F++A +  +K
Sbjct: 309 GGNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361


>gi|168051671|ref|XP_001778277.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670374|gb|EDQ56944.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 387

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 165/350 (47%), Positives = 238/350 (68%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +R ++ +    +W   + R+  L+ +   P+LW+N  +A    RER  L   +  +  ++
Sbjct: 33  ARSIDLIKARLEWKKLLARVQELDVELAKPNLWENAAKAGQFSRERGALSGQVKSVISME 92

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           D L +++ L ELA EE+D  ++ + +  L  ++     ++  +LLSGE DS   ++EV A
Sbjct: 93  DELLEHVGLAELAHEENDTQVVTDVTQGLAELRKTASERELVALLSGEHDSRSCFIEVQA 152

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++RMY  WA+ R ++   ++   GEEAGIK AT+ + G  AYG+ K 
Sbjct: 153 GAGGTESMDWAAMVMRMYRMWAQTRDYEVTVVDEMPGEEAGIKRATIRVDGLYAYGYAKT 212

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+D+  RRHTSF+++ V P +D+S + IEI ESD RI+ +RA GAGGQH
Sbjct: 213 EAGVHRLVRISPFDAGKRRHTSFAAVAVIPALDESEVSIEIGESDLRIERFRAGGAGGQH 272

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRI HIPTG+V QCQ +RSQH+NKA A +ML+++L+++E+ +R +       S
Sbjct: 273 VNKTESAVRIIHIPTGIVTQCQADRSQHRNKATALSMLQSRLHQMEVTRRAKANAQHTQS 332

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +++ WG QIRSYVLQPYQMVKDLRTN E + PS +LDG++D F+ A LA
Sbjct: 333 LSDVSWGNQIRSYVLQPYQMVKDLRTNYEVSDPSSILDGEIDGFIMAYLA 382


>gi|50954999|ref|YP_062287.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951481|gb|AAT89182.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 372

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 137/353 (38%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D     ++ L+ +   P LW + + A+ +     H  + ++ I  
Sbjct: 12  ELRSTLADITAVVDVDKLRAAIADLSERAGAPDLWDDPVNAQKVTSALSHRQSELARITA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ RL D  +L+ELA E DD     E    L+ ++  +   + ++LLSGE D   A + +
Sbjct: 72  IQQRLDDLEVLVELANEGDDEESAAEARAELEALQKALGDLEVQTLLSGEYDERAAIVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+ K+    ++    E AGIKSAT  +  P A+G L
Sbjct: 132 RSGAGGDDATDFAEMLLRMYLRWAEQHKYPVTVMDTSYAEGAGIKSATFEVDMPYAFGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRL RISP+ S  +R TSF+++ V P+++++ ++++ E D R+D +R+SG GGQ
Sbjct: 192 SVEAGTHRLARISPFGSADKRQTSFAAVEVIPLMEEANQVDVPEGDIRVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+ +L  L+ ++          
Sbjct: 252 SVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNRAAAMRVLQTRLLLLQKEEEAAKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSY L   Q+VKDLRT  E  +P+ V DGDLD F+ A +  +
Sbjct: 312 -NITASWGDQMRSYFLYGQQLVKDLRTGYESGNPATVFDGDLDGFIAAGIRWR 363


>gi|269218746|ref|ZP_06162600.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211857|gb|EEZ78197.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 378

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 141/358 (39%), Positives = 211/358 (58%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +    +  + + +   +R++ L   +  P LW +  +A+ +  +  H    +  I  +
Sbjct: 12  LRKTFQQISSVSNPEGLRERIAELTEASAAPDLWDDQDKAQSVTSKLSHAQAELDKINAM 71

Query: 63  QDRLCDNLILLELALEE--DDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSND 116
              L D   L E+A EE   D     E   +L+R       ++   +  +LLSG+ D  +
Sbjct: 72  SAALDDLETLKEMADEEAGSDPETAAELYSDLERELGQVGADMSELEIRTLLSGKYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A + + +GAGG ++ D+A +L RMY RWAE+R +  + L+    EEAGIKS T  +  P 
Sbjct: 132 AVVTIRSGAGGVDAADFAQILQRMYLRWAERRGYSAKVLDTSYAEEAGIKSTTFEVSAPY 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AYG L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I++ E+D R+D +R+S
Sbjct: 192 AYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDVPEADIRVDVFRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVRITHIPTG+VV  Q E+SQ +N+A A  +L+++L  L+  + E   
Sbjct: 252 GPGGQSVNTTDSAVRITHIPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-EEEARE 310

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +   +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +
Sbjct: 311 KKELAGDIKASWGDQMRSYVLQPYQMVKDLRTGYEAGNPEAVFDGDIDGFIDAGIRWR 368


>gi|319954923|ref|YP_004166190.1| bacterial peptide chain release factor 2 (brf-2) [Cellulophaga
           algicola DSM 14237]
 gi|319423583|gb|ADV50692.1| bacterial peptide chain release factor 2 (bRF-2) [Cellulophaga
           algicola DSM 14237]
          Length = 366

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 155/351 (44%), Positives = 221/351 (62%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D D  +  +     KT  P  W N  +A+  M+  Q     +   K  
Sbjct: 11  LLDRLGALRRYLDVDAKLIEIENEQEKTLAPDFWDNPQKAQEHMKYIQSKKKWVDDYKTS 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +L+E   E       +E      +    +E  +F+++LS E D   A +++ 
Sbjct: 71  ETLANDLEVLIEFQKEG--AITEEEVEKQYTKTLDTIENLEFKNMLSEEGDELPAIIQIT 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  W+EK+ FK + L   +G+  GIK+ TL I G  ++GWLK
Sbjct: 129 AGAGGTESCDWAAMLMRMYMMWSEKKGFKIKELNYQEGDVTGIKTVTLEIDGEFSFGWLK 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D  I T R+SGAGGQ+
Sbjct: 189 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIAINPADIDITTARSSGAGGQN 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH P+G+ + C   RSQH+N+A A  ML+++LYE+EL+K+ E     ESS
Sbjct: 249 VNKVETKVQLTHKPSGIQISCSDSRSQHENRATALKMLKSQLYEIELRKKMEARQEIESS 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DGD+D F+KA L +
Sbjct: 309 KMKIEWGSQIRNYVMHPYKLVKDVRTATETGNVDAVMDGDIDKFLKAFLMM 359


>gi|314923649|gb|EFS87480.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1]
 gi|314967087|gb|EFT11186.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2]
 gi|315092708|gb|EFT64684.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1]
 gi|315103819|gb|EFT75795.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2]
 gi|327327221|gb|EGE68997.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1]
          Length = 371

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|219684785|ref|ZP_03539727.1| peptide chain release factor 2 [Borrelia garinii PBr]
 gi|219671730|gb|EED28785.1| peptide chain release factor 2 [Borrelia garinii PBr]
          Length = 350

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 151/347 (43%), Positives = 216/347 (62%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 5   KAFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+   E D   +         ++ + +     S    E D N+A+L +H+GAGG
Sbjct: 65  DLSDLCEIVENEKD---INSLEIEFNVLEKQYKDLLTISYFKEELDINNAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVTMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K ++     +  K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQELKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|312278454|gb|ADQ63111.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
           thermophilus ND03]
          Length = 326

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +++   +  + LE+   E+D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEML--EEDDSVQEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA MLLRMY R+   + 
Sbjct: 59  ETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
                   V+DGD++ F+ A L  +
Sbjct: 299 YGVAQVDKVIDGDIEGFIDAYLKWR 323


>gi|309777858|ref|ZP_07672804.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914419|gb|EFP60213.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 327

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 146/321 (45%), Positives = 202/321 (62%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ L+R+   + + +   +++   L       +L  E+ D  I +       
Sbjct: 6   DFWSDPQHAQTLIRQLNGIKDIVESYEKLNSALEGLEETHDLLKEDYDDEIFELFEAEYM 65

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            ++   +  + + LLS E D + A LE+H GAGGTES DWA+ML RMY+RWAEK+ FK  
Sbjct: 66  EMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAEKKGFKVS 125

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L+   GEEAGIKS T L++G  AYG+LK E+GVHRLVRISP+DS  RRHTSF+S+ V P
Sbjct: 126 VLDYLPGEEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSFASLDVMP 185

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D IEIEI   D  ++T RASGAGGQH+N TDSAVR+ H PTG+V  CQ  RSQH+N+
Sbjct: 186 QFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQNGRSQHENR 245

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            +A  +L+++LY+  ++++E      +  +    WG QIRSYV  PY MVKD RT+ E +
Sbjct: 246 EEALRVLKSRLYQKMIEEQEAKLAEIKGEQKANEWGSQIRSYVFHPYSMVKDHRTSCETS 305

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
               V+DGDLD F+ A L  +
Sbjct: 306 DVQGVMDGDLDAFIFAYLKTQ 326


>gi|312149296|gb|ADQ29367.1| peptide chain release factor 2 [Borrelia burgdorferi N40]
          Length = 359

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 156/352 (44%), Positives = 224/352 (63%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +  +    LFD +    ++     +    + W +   A+ +++ +  L N I   +E+
Sbjct: 9   LKQAEDIWRKLFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +++ D   L E+A  E D S L+        ++ + +     S    E D+N+A+L +H
Sbjct: 69  INKIKDLSDLCEIAENEKDTSGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIH 125

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK
Sbjct: 126 SGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLK 184

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQH
Sbjct: 185 SEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQH 244

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +
Sbjct: 245 VNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDT 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 305 KKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 356


>gi|216335|dbj|BAA01123.1| ORF3 [Bacillus subtilis]
          Length = 299

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 156/298 (52%), Positives = 202/298 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298


>gi|187917953|ref|YP_001883516.1| peptide chain release factor 2 [Borrelia hermsii DAH]
 gi|119860801|gb|AAX16596.1| bacterial peptide chain release factor 2 [Borrelia hermsii DAH]
          Length = 353

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 225/354 (63%), Gaps = 4/354 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M   ++    GG FD D    +L     +  + + W +  +A+ +++ +  L   I   +
Sbjct: 1   MNFWKKFKMSGGSFDKDKLKTQLKEYEKQINNENFWNDNKKAQEILKNQNILKAKIEPWE 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++  +L D   L E+A  E+D  +L     ++ ++K + ++    S    + D ++A+L 
Sbjct: 61  DLIFKLQDLRELCEIAESEEDTILLD---KDINKLKEQYKHLLTISYFKEDIDISNAFLT 117

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H+GAGGTE+ DW +ML R+Y R++E+R +KTE +++ + E  GIKS T+ IKG  AYG+
Sbjct: 118 IHSGAGGTEACDWVSMLYRIYLRYSERRGYKTELIDLLEAE-GGIKSVTIEIKGKYAYGF 176

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E G+HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGG
Sbjct: 177 LKSEIGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGG 236

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +
Sbjct: 237 QHVNKTSSAVRITHLQTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKALEQQKSKSKQ 296

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K +I WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 297 EEKKDISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350


>gi|254701680|ref|ZP_05163508.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261752232|ref|ZP_05995941.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261741985|gb|EEY29911.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
          Length = 321

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 202/306 (66%), Positives = 256/306 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATL 351
           FM+A L
Sbjct: 301 FMEAAL 306


>gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 330

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 138/322 (42%), Positives = 212/322 (65%), Gaps = 1/322 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N   A+  ++E     +++   +   ++L D   ++EL   E D ++L+E +DN+
Sbjct: 5   PTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLELESDRALLEEATDNI 64

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++ +++  + + LL+G  D   A L ++AGAGGT++QDW  MLLRMY+RWAEK+ +K 
Sbjct: 65  THLQHDLDRWELQQLLNGPYDPKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              EI +G+EAGIKS T+ I G  AYG+LKGE+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184

Query: 213 PVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P++ D +  +EI + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C QERSQ +
Sbjct: 185 PILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK +A  +L+AKL  +  +++ +          E  WG QIR+YV  PYQ+VKDLR+N+E
Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVE 304

Query: 332 KTSPSDVLDGDLDDFMKATLAI 353
            T  + V++GDLD F++A L +
Sbjct: 305 TTDVTGVMNGDLDSFIEAYLRL 326


>gi|313683376|ref|YP_004061114.1| bacterial peptide chain release factor 2 (brf-2) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313156236|gb|ADR34914.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 369

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 175/349 (50%), Positives = 240/349 (68%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+        RLS +         W +   A ++ +E+  L+  ++   + 
Sbjct: 13  LTTKMQNVTGVVRPQEISARLSEIEALENSDGFWNDAAAAGVIQKEKTQLERRLAKYSKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D + L E+A EE D   ++    +   ++  V+  + E LLSGE DS++A + +H
Sbjct: 73  FNTLGDAVDLYEMAKEEGDEETIESLFADAGSLENNVKSMEVEVLLSGEHDSHNAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRWAE+  F  E L+   GEEAGIK A LLIKG N YG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYTRWAERHDFTVEMLDYQAGEEAGIKDAALLIKGVNVYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISPYDS ++RHTSF+S+ V P +DD I+I+I + D RIDTYRASGAGGQH
Sbjct: 193 NENGIHRLVRISPYDSAAKRHTSFTSVMVSPELDDDIDIDIEDRDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELE++K++  A +    
Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELEMEKKQ--AAVDGIE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+E GWG QIRSYVL PYQ VKD R+ I  ++ S++LDGD+D+ ++  L
Sbjct: 311 KSENGWGHQIRSYVLAPYQQVKDTRSGIPYSNISNILDGDIDEMIEGVL 359


>gi|289425462|ref|ZP_06427239.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|289154440|gb|EFD03128.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|313771879|gb|EFS37845.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1]
 gi|313807112|gb|EFS45607.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2]
 gi|313809604|gb|EFS47340.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1]
 gi|313813321|gb|EFS51035.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1]
 gi|313819308|gb|EFS57022.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2]
 gi|313819957|gb|EFS57671.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1]
 gi|313823250|gb|EFS60964.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2]
 gi|313824962|gb|EFS62676.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1]
 gi|313829923|gb|EFS67637.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1]
 gi|313833072|gb|EFS70786.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1]
 gi|314924796|gb|EFS88627.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3]
 gi|314960646|gb|EFT04748.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2]
 gi|314972908|gb|EFT17005.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1]
 gi|314975668|gb|EFT19763.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1]
 gi|314978052|gb|EFT22146.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2]
 gi|314984148|gb|EFT28240.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1]
 gi|314989571|gb|EFT33662.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3]
 gi|315080944|gb|EFT52920.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1]
 gi|315084867|gb|EFT56843.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2]
 gi|315086040|gb|EFT58016.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3]
 gi|315088241|gb|EFT60217.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1]
 gi|315095727|gb|EFT67703.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1]
 gi|315105991|gb|EFT77967.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1]
 gi|327327935|gb|EGE69709.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3]
 gi|327330072|gb|EGE71825.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2]
 gi|327442693|gb|EGE89347.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1]
 gi|327443908|gb|EGE90562.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2]
 gi|327443976|gb|EGE90630.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2]
 gi|328754956|gb|EGF68572.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1]
 gi|328761406|gb|EGF74932.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1]
          Length = 371

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|261338116|ref|ZP_05966000.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
 gi|270276738|gb|EFA22592.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
          Length = 376

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 207/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D +    + + L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 12  EARAKYEEIALALDVNRLQSQAAQLEQEAAEPGLWDDPEHAQKVTSKLSAVQSQLKHLAS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    ++ I  ++   + ++L+ GE D   A + +
Sbjct: 72  AASRIDDVETLVELGREEADQDTLDEAQSEVESITNDLRDMEIQTLMDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  IE+ ES+ R+DTY ASG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPESEIRVDTYCASGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGEETSQTQAVFDGDIDAFIQAGIRWR 363


>gi|254820379|ref|ZP_05225380.1| peptide chain release factor 2 [Mycobacterium intracellulare ATCC
           13950]
          Length = 370

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 217/354 (61%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEREASDPQLWDDQTRAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       +   + ++ E+E  +  +LLSGE D  +A + 
Sbjct: 72  RGRLDDLPVLYELAAEEGEGAAEALAEADAELKALQAEIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVELFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  +
Sbjct: 252 QSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDALK 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 GEGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364


>gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
 gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
          Length = 358

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 143/345 (41%), Positives = 218/345 (63%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD       +  L      P  W     A+  +++   L + +   ++  ++L D  
Sbjct: 9   RTIFDLPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTE 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL   EDD ++ +E  +N+ ++   ++  + + LLSG  D+  A L ++AGAGGT++
Sbjct: 69  AIAELLELEDDTTLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW E++ +K    E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRL
Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVNLTELSEGDEAGIKSATLEIEGCYAFGYLKGEKGTHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ + V P++ +D ++++I + D  I T R+ G GGQ+VN  ++A
Sbjct: 189 VRISPFNANGKRQTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG
Sbjct: 249 VRIVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVEAAWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIR+YV  PYQMVKDLRTN+E T  + V+DG+LD F++A L   
Sbjct: 309 NQIRNYVFHPYQMVKDLRTNVETTDVTGVMDGNLDSFIEAYLRYD 353


>gi|314986213|gb|EFT30305.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2]
          Length = 371

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDASDFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|163843187|ref|YP_001627591.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
 gi|163673910|gb|ABY38021.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
          Length = 321

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 257/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI++     ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEGAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGQNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2]
          Length = 372

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 212/354 (59%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L +    +  + D DN    ++ +  +   P  W +   A+ +     H    +  +++
Sbjct: 11  NLRQTYKAILDVSDLDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQGTLEKLEK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             +R+ D  +++E++ +E D     E   +L+++  ++   +  +LL+ E D   A + V
Sbjct: 71  FGERIDDAELIIEMSEDEGDEDSKVEAERDLKKLHDQLAELEISTLLNHEYDERSAVVTV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAE R +  + L+    E AGIKSAT+ +  P AYG L
Sbjct: 131 RSGAGGDDATDWAQMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNAPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI E+D RID YR+SG GGQ
Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESTDHVEIDENDLRIDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH PTGVVV  Q E+SQ +N+  A  +L+++L +L+  K E       +
Sbjct: 251 SVNTTDSAVRITHAPTGVVVSMQNEKSQIQNREAAMRVLQSRLLDLKR-KEEAAEKKELA 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYV  PYQMVKDLRT  E  +PS+V DGDLD  ++A +  +K
Sbjct: 310 GDIKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLIEAGIRWRK 363


>gi|242041179|ref|XP_002467984.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
 gi|241921838|gb|EER94982.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
          Length = 467

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 152/350 (43%), Positives = 222/350 (63%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + +
Sbjct: 108 AQSVKLIKKRLKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQFE 167

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +++ +L LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV A
Sbjct: 168 QELIEHIEMLRLAREENDNELEMESMRALADMRRSAKEKELNALLSGDNDSCPCFIEVQA 227

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++ MY  WA++R +    +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 228 GAGGTESMDWAAMVMNMYRSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKA 287

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ D+    +I +SD RI+ +R+ G GGQH
Sbjct: 288 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQH 347

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            NTT+SA+RI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S
Sbjct: 348 ANTTESAIRIVHIPTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQS 407

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GD+DDF+   L+
Sbjct: 408 LNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFILNYLS 457


>gi|210631232|ref|ZP_03296815.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
 gi|210160119|gb|EEA91090.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
          Length = 376

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 208/354 (58%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +L  +      + A  R++ L   +  P  W +   A+  M E   +   +  +   
Sbjct: 17  LSARLTEVEAYLHIEEARGRVTELEEASAAPGFWDDAEAARAYMAELAQVKGDVGLVDRA 76

Query: 63  QDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +RL D    LELA E  +D    + E +   + +   ++  +  S  +GE D   A L 
Sbjct: 77  HERLSDARAALELADEMGQDGAEFIAEAAAAAEELTRAIDEMELSSWFTGEFDHGSAILS 136

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+QDW  ML +MY ++  +R +K    +    E  GI  AT+ ++G +A+G 
Sbjct: 137 IKPGQGGLEAQDWTFMLFKMYMKYFARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGM 196

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVRISP D+  RR T+F+ + V PV+ D IEIE++  D R+D Y ASG GG
Sbjct: 197 LRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIEIEVAPDDIRVDVYHASGPGG 256

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA    +L+A+LYELEL+KR E  +   
Sbjct: 257 QGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELEKRAETLDEIR 316

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
             KTEIG+G QIRSYVL PYQMVKDLR+ +E ++   VL DGDLD F+      
Sbjct: 317 GPKTEIGFGNQIRSYVLYPYQMVKDLRSGVETSNVDSVLEDGDLDPFIIGYHRW 370


>gi|237729831|ref|ZP_04560312.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
 gi|226908437|gb|EEH94355.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
          Length = 310

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 171/309 (55%), Positives = 217/309 (70%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +ER  L+  +  + ++   L D   LLELA+E DD     E    L  ++ ++   +F
Sbjct: 1   MGKERSSLEAIVDTLDQMSQGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AG
Sbjct: 61  RRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+
Sbjct: 121 IKSVTIRIAGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD
Sbjct: 241 YELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLD 299

Query: 345 DFMKATLAI 353
            F++A+L  
Sbjct: 300 QFIEASLKA 308


>gi|282853672|ref|ZP_06263009.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|282583125|gb|EFB88505.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|314983205|gb|EFT27297.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3]
 gi|315092426|gb|EFT64402.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4]
          Length = 368

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 13  LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 73  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 311 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 363


>gi|313792395|gb|EFS40490.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1]
 gi|313801469|gb|EFS42718.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2]
 gi|313838232|gb|EFS75946.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1]
 gi|314963179|gb|EFT07279.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1]
 gi|315078242|gb|EFT50285.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2]
 gi|327453496|gb|EGF00151.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1]
          Length = 371

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 219/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D       ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPAAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|15827278|ref|NP_301541.1| peptide chain release factor 2 [Mycobacterium leprae TN]
 gi|221229756|ref|YP_002503172.1| peptide chain release factor 2 [Mycobacterium leprae Br4923]
 gi|6093957|sp|O32885|RF2_MYCLE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790917|sp|B8ZUV0|RF2_MYCLB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2326693|emb|CAB11005.1| peptide chain release factor 2 [Mycobacterium leprae]
 gi|13092827|emb|CAC30176.1| putative peptide chain release factor 2 [Mycobacterium leprae]
 gi|219932863|emb|CAR70761.1| putative peptide chain release factor 2 [Mycobacterium leprae
           Br4923]
          Length = 374

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 157/358 (43%), Positives = 218/358 (60%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW + + A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVEGLRTRIEKLEHEASDPKLWDDQVRAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDD------CSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L ELA EE             E    L+ +++++E  +  +LLSGE D  +
Sbjct: 72  RRRLDDLPVLYELAAEERAAAAASGMEAFAEADAELKALRVDIEATEVRTLLSGEYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A + + +GAGG ++ DWA ML+RMY RWAE+ K+  E L+    EEAG+KSAT  +  P 
Sbjct: 132 ALITIRSGAGGVDAADWAEMLMRMYIRWAEQHKYGVEVLDTSYAEEAGVKSATFAVHAPF 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AYG L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+S
Sbjct: 192 AYGTLASEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVEITDHIDIPEGDVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     
Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGLVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEL 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  +       WG QIRSYVL PYQMVKDLR   E  +P+ VLDGD+D F++A +  +
Sbjct: 312 DALKGRGGS-SWGNQIRSYVLHPYQMVKDLRNEYEVGNPTAVLDGDIDGFLEAGIRWR 368


>gi|39935519|ref|NP_947795.1| peptide chain release factor 2 [Rhodopseudomonas palustris CGA009]
 gi|39649371|emb|CAE27894.1| translation peptide releasing factor RF-2 [Rhodopseudomonas
           palustris CGA009]
          Length = 322

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E D  I++E  D L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMY RWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|166031017|ref|ZP_02233846.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
 gi|166029284|gb|EDR48041.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
          Length = 318

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 154/307 (50%), Positives = 210/307 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L   +  I  +     D   L+E+  EE+D S+++E   ++   + + E  + E
Sbjct: 1   MKELKDLQEHLKVIHALYSEYDDICTLIEMVDEEEDRSMVKEIEKDIAHFEEDFEKLRIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DS +A + +HAG GGTE+ DW NML RMYTRW + + F  + L+  DG+  GI
Sbjct: 61  TLLSGEYDSCNAIMTLHAGTGGTEACDWVNMLYRMYTRWFQTKGFSVQVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP++S  +R TSF+S  V P +++ I+I+I E
Sbjct: 121 KNITFEVVGDNAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVVPDIEEDIDIDILE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+AKL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLK 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       +IG+G QIRSYV+QPY +VKD RTN+E  + + VLDGDLD 
Sbjct: 241 LLQEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNVENGNVTAVLDGDLDM 300

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 301 FINAYLK 307


>gi|297564871|ref|YP_003683843.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
 gi|296849320|gb|ADH62335.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
          Length = 375

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 7/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ L G  D      RL  L  K  DPHLW N  EAK + +E   L  A+   + +
Sbjct: 16  LQHRLDALRGYLDIAGKESRLRELEVKLNDPHLWDNPTEAKAISQEATRLRKAVENYRRL 75

Query: 63  QDRLCDNLILL-ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  L   L L  EL+ EE       +    L +   E+E    ++LLS     N A + +
Sbjct: 76  ESDLQGLLELWPELSAEE-----RAQMQPELDKAGRELEDLYHQTLLSFPYAENAAIVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA ML RMYTR+AE+  FK E +++  G EAGI  A  +++G  AYG L
Sbjct: 131 KPGAGGTEACDWAEMLYRMYTRFAERHGFKVEVVDVEPGAEAGIDLAQFIVRGEYAYGLL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+++  +R TSF+++ V P VD+S+E+ I+  D RID  R+ G GGQ
Sbjct: 191 SAEAGVHRLVRPSPFNAQGKRQTSFAALEVMPEVDESVEVAINPEDLRIDVMRSQGKGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG++V+CQ  RSQ KNK  A N+LR+KL+E+E +K++E     + 
Sbjct: 251 GVNTTDSAVRVVHLPTGIMVKCQITRSQQKNKELAMNILRSKLFEIEWKKKQEELARLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG QIRSYVL   Q VKD RT   +  P +VLDGDL++ + A L  K
Sbjct: 311 ESRPNEWGSQIRSYVL-DKQYVKDHRTGEMRHDPENVLDGDLENLVWAGLEWK 362


>gi|226226984|ref|YP_002761090.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
 gi|226090175|dbj|BAH38620.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
          Length = 335

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 163/325 (50%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +   A+ ++++ + L   +     +Q R+     L EL   E D  +  +  
Sbjct: 1   MADPAFWNDQEHAREIVQQVKVLKGWVEPSDSLQSRIDSARELDELLSLEPDKGMNADLD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +QRI  +++  + +SLL G  D  DA LE+ AGAGGTE+QDWA+MLLR+YTRWAE++ 
Sbjct: 61  QEVQRILADLDAFELKSLLRGNDDYRDAQLEISAGAGGTEAQDWASMLLRLYTRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++ DGEEAGIK A L IKG  AYG+L+ E GVHRLVRISP+DS +RRHTSF+S+
Sbjct: 121 FDLEVLDLSDGEEAGIKGAVLEIKGQYAYGFLRPESGVHRLVRISPFDSQARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYPVV++ I IEI E D RID YRASGAGGQHVN T SAVRITHIP+G+V   QQERSQ
Sbjct: 181 FVYPVVNEEINIEIREEDLRIDVYRASGAGGQHVNKTSSAVRITHIPSGIVCASQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNKA A   L+ +LY+LE++K+  +    +++K ++ +G QIRSYV QPY MV D R+ 
Sbjct: 241 FKNKATAMKQLKNRLYQLEIEKQAAVKAAFDANKQDVTFGSQIRSYVFQPYTMVNDHRSE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           ++      V+DGD+D F+ A L  +
Sbjct: 301 LKIADVQKVMDGDIDPFIHAYLKQE 325


>gi|332703829|ref|ZP_08423917.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332553978|gb|EGJ51022.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 368

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 154/350 (44%), Positives = 219/350 (62%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L G  D D   +RL  +      P  W        +++E++ +   +  +  
Sbjct: 13  QLLDSYESLWGRLDHDRDNERLRQIEDALSRPGAWDKPDRLTPMLQEKRQISEKLERLTV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +    L+LA E+    +L   S+ L  ++  ++  +   +L+G  D N A +E+
Sbjct: 73  LHKTRQEVEEWLDLAREDQTQEVLAILSEQLDVLQERLKDVELREMLAGPEDQNSAIMEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTE+QDWA MLLRMY RW+E++ +K   L+  +GEEAG KS T+ ++G  AYG L
Sbjct: 133 HSGAGGTEAQDWAEMLLRMYRRWSERQGYKVSILDFLEGEEAGFKSVTVQVEGLYAYGML 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G+HRL+RISP+D++ RRHTSF+S+ VYP V   I+I++ E D RID +RASGAGGQ
Sbjct: 193 KGESGIHRLIRISPFDTSGRRHTSFASVAVYPDVGTDIDIDVREEDLRIDVFRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTGVV QCQ E+SQ +NK  A  +L+A+LYELEL+K          
Sbjct: 253 HVNKTESAVRITHLPTGVVAQCQNEKSQLRNKETALKILKARLYELELKKIAAARQAEYE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SK  I WG QIR+Y LQPY++VKD RT +E      VL+G++D  ++  L
Sbjct: 313 SKDTIAWGSQIRTYTLQPYRLVKDHRTGMEIGDVEAVLNGEIDPLIRNFL 362


>gi|331089985|ref|ZP_08338875.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330402899|gb|EGG82465.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 332

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 224/324 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   ++ +M+E + L +++  I+++     D ++L+E++ EED     +E  
Sbjct: 1   MEEPGFWDDPEVSQQVMKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + LQ+ +   E  +  +LL+G  D ++A + +HAGAGGTES DW  ML RMYTRWAEK+ 
Sbjct: 61  EELQQFEETFEELRIGTLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+  +G+ AG+K  T  +KG NAYG+L+ E+GVHRLVRISP++S  +R TSF+S 
Sbjct: 121 YSIEELDYLEGDVAGVKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ I+IEI++ D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVIPDIEEDIDIEINDDDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML++KLY ++ Q++ E  +       +I +G QIRSYV+QPY MVKD RTN
Sbjct: 241 HMNKDKAMQMLKSKLYLMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E ++   V+DG++D F+ A L+ 
Sbjct: 301 AEVSNVGGVMDGNIDPFINAYLSA 324


>gi|325971169|ref|YP_004247360.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
 gi|324026407|gb|ADY13166.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
          Length = 367

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 158/348 (45%), Positives = 223/348 (64%), Gaps = 2/348 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            +    D D  +  +  L TKT +   W +   A+ L  +   L ++    KE+ D L D
Sbjct: 18  TVWRRLDPDKMLSEIQKLETKTLEAGFWDDRKGAEQLFAQLNGLKDSYYPWKELIDSLGD 77

Query: 69  NLILLELALEEDD-CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              L+E+  +E D      +    + ++K +    + ++LL G+ D ND +L +HAGAGG
Sbjct: 78  MAELMEIYADEPDNPEEEAQIDAQITQLKEQYGQLKLKTLLDGKFDKNDCFLTIHAGAGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+ DWANML+RMY R+ E+  FK+E L++ + +E GIKSAT+ + GP ++G+LKGE GV
Sbjct: 138 NEASDWANMLMRMYLRYCERNGFKSEVLDLLE-DEGGIKSATIRVSGPYSFGYLKGEAGV 196

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S++  PV+DD+IEI++   D R+DTYRA GAGGQHVN TD
Sbjct: 197 HRLVRISPFDSQKRRHTSFTSVYASPVIDDTIEIDLKPEDYRLDTYRAGGAGGQHVNKTD 256

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH  +G+VVQCQ ERSQ  NK  A+ ML+++LYE   + +E+        K EI 
Sbjct: 257 SAVRITHYESGIVVQCQNERSQVMNKDVAFKMLKSRLYEYYRELKEKEHQKDAIEKKEIT 316

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           WG QIRSYV QPY MVKD RT++   +   V+DG++ DF++  L   +
Sbjct: 317 WGSQIRSYVFQPYTMVKDHRTSVTVGNIQAVMDGEIGDFIEGYLQWAQ 364


>gi|50842838|ref|YP_056065.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289426937|ref|ZP_06428661.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|295130890|ref|YP_003581553.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|81611548|sp|Q6A808|RF2_PROAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|50840440|gb|AAT83107.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289159877|gb|EFD08057.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|291375816|gb|ADD99670.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|332675771|gb|AEE72587.1| peptide chain release factor 2 [Propionibacterium acnes 266]
          Length = 368

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 13  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 73  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 311 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 363


>gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
 gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
          Length = 303

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 153/303 (50%), Positives = 215/303 (70%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           + N +   + ++    +  ILLELA+ E+D    QE + +L+ ++  +   + E + SGE
Sbjct: 1   MQNLVDAFRAVEAAGEEAEILLELAIAEEDRETEQEVAGHLKNLESRLAELELECMFSGE 60

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+A L +HAGAGGTE+QDW  +LLRMY RWAE + F T+ L++  G+EAGIK  T++
Sbjct: 61  HDANNAILTIHAGAGGTEAQDWVEILLRMYLRWAENKGFTTDTLDLLPGDEAGIKGVTVM 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG  AYG+L+ E G+HRLVRISP+D+  RRHTSF+S++++P + D I +E+++ D RID
Sbjct: 121 VKGRWAYGYLRSEMGIHRLVRISPFDTGGRRHTSFASVFIFPELTDDIAVEVNDKDLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T+RASGAGGQHVN T SA+RITH+PTG+V QCQ ERSQH+NK  A  ML+A+LYE +  +
Sbjct: 181 TFRASGAGGQHVNKTSSAIRITHLPTGIVAQCQNERSQHRNKDTAMKMLKAQLYERQQAQ 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R E        K EI WG QIRSYVLQPY++VKD RT+ E  +   VLDG++D F+K+ L
Sbjct: 241 RREDQEHLHGDKKEIAWGSQIRSYVLQPYRLVKDHRTDHETGNVDSVLDGNIDPFIKSYL 300

Query: 352 AIK 354
             +
Sbjct: 301 LWR 303


>gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 517

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 137/358 (38%), Positives = 221/358 (61%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++N +      +  ++ ++ L  K+ D  LW +  +A+ L+     L   +  +
Sbjct: 149 VELAVERVNEVRQDAGLEQLLEEIASLENKSGDSTLWDDPSKAQELLVALTELKEKVKLL 208

Query: 60  KEIQDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            + + ++ +   +++L  E D  D  +L+E S  ++ +   ++  +   LLSG  D + A
Sbjct: 209 NDFKSQVEEADTIVQLTEELDSIDTGLLEEASKIIKALNKALDNFEMTRLLSGPYDKDGA 268

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++K+  +E   GEEAGIKSAT+ ++G  A
Sbjct: 269 VITISAGAGGTDAQDWADMLLRMYVRWGEKQRYKSRVVEKSPGEEAGIKSATVELEGRYA 328

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 329 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAG 388

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A   L+AKL  +  ++R    
Sbjct: 389 GKGGQNVNKVETAVRMVHIPTGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEI 448

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  S V+DG+LD F+KA L  K
Sbjct: 449 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 506


>gi|73666975|ref|YP_302991.1| peptide chain release factor 2 [Ehrlichia canis str. Jake]
 gi|72394116|gb|AAZ68393.1| bacterial peptide chain release factor 2 (bRF-2) [Ehrlichia canis
           str. Jake]
          Length = 335

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 166/333 (49%), Positives = 228/333 (68%), Gaps = 2/333 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  LN +     LW +   A+ ++ ER  +   I+   E+++       LL++   + D 
Sbjct: 2   LVDLNVQCSSTSLWTDNALAQNILSERARVSKIITSFTELEEEFNYYTELLDVVKNDTD- 60

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L +    L ++K  ++ K+ E L S EAD ND ++E+ +GAGGTES DW+ MLLRMY 
Sbjct: 61  ELLNDIEIGLTKLKERIQKKEVECLFSNEADQNDCFIEIQSGAGGTESNDWSCMLLRMYV 120

Query: 143 RWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           RWAE    F TE +   DGEE GIKSAT+ + G NAYGW K E G+HRLVRISP++SN++
Sbjct: 121 RWAEIYHNFTTEIVYKLDGEEVGIKSATIKVTGDNAYGWSKTESGIHRLVRISPFNSNAK 180

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHT+FSSI V P+ D++I IE  + D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VV
Sbjct: 181 RHTTFSSILVSPITDENINIETLDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVV 240

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ  RSQH+N A+A N+L+++LY+L+LQ++E+      + +  IGWG QIRSY++ PYQ
Sbjct: 241 QCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRSYIMHPYQ 300

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           MVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 301 MVKDVRTGHEIGNVNSVLDGNLDPFIISALTAK 333


>gi|91976917|ref|YP_569576.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB5]
 gi|91683373|gb|ABE39675.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB5]
          Length = 322

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++A++ I +++  L DN+ ++EL   E D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDALTGIGKVERELTDNVEMIELGEAEGDDGVVSEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 340

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 155/337 (45%), Positives = 210/337 (62%), Gaps = 1/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
               ++ L  +   P LW +   A+ +  +  HL   +   + ++ R+ D  IL ELA  
Sbjct: 1   MRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRGRIDDLEILFELAEA 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           EDD     E    L+ ++  ++  +  +LLSGE D  +A + + A AGG ++ D+A  L 
Sbjct: 61  EDDPDARAEAEAELESVRKALDEMEVRTLLSGEYDEREALVNIRAEAGGVDAADFAEQLQ 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L  EQG HRLVRISP+D+
Sbjct: 121 RMYLRWAERHNYGTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRISPFDN 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RR TSF+ + V PVV+ +  IEI ES+ R+D YRASG GGQ VNTTDSAVR+THIPTG
Sbjct: 181 QGRRQTSFAGVEVLPVVEKTDHIEIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +       WG Q+RSYVL 
Sbjct: 241 IVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQARMDALKGDGGN-SWGNQMRSYVLH 299

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PYQMVKDLRT+ E  +P  VLDG++D F++A +  +K
Sbjct: 300 PYQMVKDLRTDFEVGNPQSVLDGEIDGFLEAGIRWRK 336


>gi|219685347|ref|ZP_03540166.1| peptide chain release factor 2 [Borrelia garinii Far04]
 gi|219673120|gb|EED30140.1| peptide chain release factor 2 [Borrelia garinii Far04]
          Length = 350

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 152/347 (43%), Positives = 215/347 (61%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 5   KAFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+   E D   +         ++ + +     S    E D N A+L +H+GAGG
Sbjct: 65  DLSDLCEIIENEKD---INSLEIEFNVLEKQYKDLLTISYFKEELDINSAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     +  K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQELKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|226528475|ref|NP_001148129.1| peptide chain release factor 2 [Zea mays]
 gi|195616002|gb|ACG29831.1| peptide chain release factor 2 [Zea mays]
          Length = 467

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 153/350 (43%), Positives = 222/350 (63%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + +
Sbjct: 108 AQSVKVIKKRLKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFE 167

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +++ +L LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV A
Sbjct: 168 QELIEHIEMLRLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQA 227

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++ MY  WA++R +K   +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 228 GAGGTESMDWAAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKA 287

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ D+    +I +SD RI+ +R+ G GGQH
Sbjct: 288 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQH 347

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            NTT+SA+RI HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      S
Sbjct: 348 ANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQS 407

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 408 LNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
 gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
          Length = 375

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 218/352 (61%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ +L       D       +  L      P  W N   A+  +++   L +++    +
Sbjct: 22  QIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQ 81

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +L D   + EL   E+D ++ +E   NL ++  E++  + + LLSG  DS  A L +
Sbjct: 82  WMGQLEDLKAIAELLELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTI 141

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRW E++ +K    EI +G+EAGIKSATL I+G  AYG+L
Sbjct: 142 NAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYL 201

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240
           KGE+G HRLVRISP+++N +R TSF+ I V P + ++ +++EI E D  I T R+ G GG
Sbjct: 202 KGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGG 261

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVR+ H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +      
Sbjct: 262 QNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIR 321

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E  WG QIR+YV  PYQMVKD+RTN E T  + V+DG LD F+++ L 
Sbjct: 322 GDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 373


>gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829]
 gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
 gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
          Length = 375

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 199/354 (56%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +G     +     +  L  +  +   W +   A  +M +   L   ++    
Sbjct: 16  ELEQRCEQVGMYLHINELRSHVDKLTVQAGETTFWNDAAHATEVMAQLGALKEKLNQYDS 75

Query: 62  IQDRLCDNLILLELAL-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
               L D     ELA     D  +L E      ++   ++  +  +  + E D+  A + 
Sbjct: 76  AYKLLLDVQAAFELADTSSQDDEMLIEAKRLANKLTNVLDNLELNTWFNDEFDTGAAIVT 135

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+QDW +ML +MY  + E++ +  +  +   GE  GI  AT  + G NAYG 
Sbjct: 136 ITPGQGGLEAQDWCDMLFKMYLHYCERKSWTVDINDAPVGEVIGIDRATFTVTGKNAYGM 195

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ EQGVHRLVRISP D+  RR T+F+ + V PV+  +IE++I   D RID Y ASG GG
Sbjct: 196 LRAEQGVHRLVRISPTDAKKRRQTTFAGVEVLPVLPQTIEVQIDTQDIRIDVYHASGPGG 255

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A  +LR+KLYELE Q+REE  +   
Sbjct: 256 QGVNTTDSAVRITHIPTGIVVTCQNERSQLQNKAAAMQILRSKLYELEKQRREEELDDLR 315

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
             K +I WG QIR+Y+L P+Q+VKD RT +E  +   VL +GDLD F+ A    
Sbjct: 316 GPKHDISWGNQIRNYILYPFQLVKDTRTQVETGNVDAVLQEGDLDQFIIAYHRW 369


>gi|163868347|ref|YP_001609556.1| peptide chain release factor 2 [Bartonella tribocorum CIP 105476]
 gi|161018003|emb|CAK01561.1| peptide chain release factor RF-2 [Bartonella tribocorum CIP
           105476]
          Length = 321

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 210/309 (67%), Positives = 256/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++I+ +      L + + L+ +  EE D  I+ +  ++++ +K E++ +Q +
Sbjct: 1   MRERQRLDDSINGLLSFTKTLEECIELIAMGEEESDVEIIADAENSIRHLKSEIDKRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGI
Sbjct: 61  VLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE
Sbjct: 121 KSATILVKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  N  ESSKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+G+LD 
Sbjct: 241 EEELKKREEETNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDA 300

Query: 346 FMKATLAIK 354
           F++A L+ +
Sbjct: 301 FIEAALSQR 309


>gi|325264746|ref|ZP_08131475.1| peptide chain release factor 2 [Clostridium sp. D5]
 gi|324030038|gb|EGB91324.1| peptide chain release factor 2 [Clostridium sp. D5]
          Length = 310

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 158/309 (51%), Positives = 221/309 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L  ++  I+++     D  +L+E++ EE D   +    + L R + E E  + +
Sbjct: 1   MQHLKALQESVKQIEQLYADHEDIGLLIEMSEEEPDDETIGGIEEELDRFEEEFEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GE DS+ A + +HAGAGGTES DWANML RMY+RWAEK+ F  E L+  DG+ AGI
Sbjct: 61  TLLTGEYDSSSAIVTLHAGAGGTESCDWANMLYRMYSRWAEKKGFSLEVLDYLDGDVAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  ++G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S  V P ++D+I+IEI+E
Sbjct: 121 KGVTFEVEGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEDNIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + RIDTYR+ GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 EELRIDTYRSGGAGGQHVNKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ +  +       EIG+G QIRSYV+QPY +VKD RTN+E ++ + V+DG+LD 
Sbjct: 241 LLKQQEQADKVSGIRGEVKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVMDGNLDP 300

Query: 346 FMKATLAIK 354
           F+ A L++K
Sbjct: 301 FINAYLSMK 309


>gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
 gi|166225118|sp|A6LN93|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
          Length = 369

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 235/350 (67%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ ++   +  +F  ++  + L  L     +   W +   AK + +  Q +   I  + +
Sbjct: 12  EVKKRYEDIVKVFHPEDKKKELEELEKLMGESDFWNDQKRAKEISQNAQRIRKIIDDMVD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+++L D    L   L E+D + L      +  I+ +V+  + E +L+ + DS++AYL +
Sbjct: 72  IENKLEDLEAGL--ELLEEDATFLDTIKQLIDDIERKVKTFELELILNEKFDSSNAYLSI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE+R F  + ++   GEEAGIKSA L IKG   YG+L
Sbjct: 130 HPGAGGTESQDWASMLLRMYMRWAERRGFDVQIVDYQPGEEAGIKSAMLYIKGEYVYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I++EI+  D RIDTYRASGAGGQ
Sbjct: 190 KYERGVHRLVRISPFDANKRRHTSFASVNVMPEIEDDIDVEINPEDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITHIPTG+VV CQ ERSQ +NK  A  +L+A+LY+LEL+KR++     + 
Sbjct: 250 YVNKTESAVRITHIPTGIVVTCQTERSQLQNKETAMKVLKARLYQLELEKRQKQLEEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV QPY MVKD RTN+E  +   V+DGD+D F+++ L
Sbjct: 310 ELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGDIDIFIESEL 359


>gi|325105358|ref|YP_004275012.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
 gi|324974206|gb|ADY53190.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
          Length = 362

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 222/350 (63%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D D  +  L      T +P  W N  EA+ ++   +   +        
Sbjct: 9   LRDRITSLRRHLDIDAKLIELHREEAMTLEPTFWDNPKEAEKILHTIKIRKSWTEAYSNA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  ++ E     D  +   E  +     +  +E  +F+++LS E D  +A L++ 
Sbjct: 69  NAAVEDLAVMYEFYQSGD--ATADEVDEAYAYAQKMLEELEFKNMLSAEEDQLNAVLQIT 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML+RMY  W EK   K    +  +G+ AGIKS TL  +G  AYG LK
Sbjct: 127 AGAGGTESCDWASMLMRMYIMWGEKHGCKVIEQDSQEGDVAGIKSVTLQFEGDFAYGHLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP++DD+I+I+++ +D   +T+R+ GAGGQ+
Sbjct: 187 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLIDDNIDIQVNPADLEFETFRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H PTG++++ Q+ RSQ +NK  A  +L+++LYE+E++KR E +   ES 
Sbjct: 247 VNKVETAVRLYHKPTGIIIKNQESRSQLQNKENAIRLLKSQLYEIEMRKRREKSAAIESD 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIR+YVL PY+++KD RT+ E ++  DVLDGDLD+F+KA L 
Sbjct: 307 KKKIEWGSQIRNYVLHPYKLIKDNRTDYETSNVQDVLDGDLDEFIKAYLM 356


>gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
 gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
          Length = 310

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 163/308 (52%), Positives = 217/308 (70%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + RER  L+  +  I++++    D   LLE+A  EDD   L E    +  +  ++E  +F
Sbjct: 1   MGRERSSLETIVLTIEKLEGGATDAADLLEMAAAEDDQDTLTEVISEIDALVAQLERLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             +  GE D+N+A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT+ +E   G+ AG
Sbjct: 61  RRMFDGEMDANNAFLDIQSGSGGTEAQDWAEMMLRMYLRWGEAKGFKTQLMEASAGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+IEIEI+
Sbjct: 121 IKSATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIEIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D R+DTYRASGAGGQHVN TDSAVR+TH PTG+ VQCQ ERSQH+N+  A  +LRAKL
Sbjct: 181 PADLRVDTYRASGAGGQHVNKTDSAVRLTHNPTGIAVQCQTERSQHQNRDNAMKLLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE+E+ KR E     E  K +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD
Sbjct: 241 YEMEMLKRNEEKQAMEDGKADIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGSLD 299

Query: 345 DFMKATLA 352
            F++A+L 
Sbjct: 300 QFIEASLK 307


>gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
 gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
          Length = 300

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 157/297 (52%), Positives = 216/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  +  +   L D   L ELA  +DD S L+    +    + ++E  +F  + S  AD  
Sbjct: 2   VETLTSLGTGLADANELFELAKADDDDSTLESIEKDADAFQEKLENLEFRRMFSNPADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + +L++ AGAGGTE+QDWA+MLLR Y R+AE++ FK E LE  +G+ AGIKSAT+ ++G 
Sbjct: 62  NCFLDIQAGAGGTEAQDWASMLLRQYLRYAERKGFKVEVLEESEGDVAGIKSATIKMEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRA
Sbjct: 122 YAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R   
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 QQKLEDSKTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 297


>gi|295982099|pdb|2X9R|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982158|pdb|2X9T|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
          Length = 351

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 155/352 (44%), Positives = 208/352 (59%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + +
Sbjct: 1   LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   LLEL  EE      +     L+    +++    ++LL+      +A L + 
Sbjct: 61  ES---DLQGLLELM-EELPAEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQ 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L 
Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ 
Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE        
Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 297 VRPIEWGSQIRSYVL-DKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 347


>gi|219887937|gb|ACL54343.1| unknown [Zea mays]
          Length = 467

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 153/350 (43%), Positives = 222/350 (63%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + +
Sbjct: 108 AQSVKVIKKRLKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFE 167

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +++ +L LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV A
Sbjct: 168 QELIEHIEMLRLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQA 227

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++ MY  WA++R +K   +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 228 GAGGTESMDWAAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKA 287

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ D+    +I +SD RI+ +R+ G GGQH
Sbjct: 288 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQH 347

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            NTT+SA+RI HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      S
Sbjct: 348 ANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQS 407

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 408 LNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|226953405|ref|ZP_03823869.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|294651888|ref|ZP_06729178.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226835836|gb|EEH68219.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|292822211|gb|EFF81124.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 297

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 161/295 (54%), Positives = 211/295 (71%), Gaps = 1/295 (0%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
               + ++L D   +L+LA+E DD S+L +    L   +  +   +F  + S   D N  
Sbjct: 1   MFDRLAEQLDDAKAMLDLAVEADDESLLLDVQAELDSAEQALGNLEFRRMFSNPMDPNPC 60

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           +LE+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ + G  A
Sbjct: 61  FLEIQSGSGGTEAQDWASMLLRMYLRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFA 120

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YGWL+ E GVHRLVR SP+DSN+ RHTSFS++++ P +DD+IEI+I+ SD R DTYRASG
Sbjct: 121 YGWLRTESGVHRLVRKSPFDSNNNRHTSFSAVFISPEIDDNIEIDINPSDVRTDTYRASG 180

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A 
Sbjct: 181 AGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQ 240

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L 
Sbjct: 241 ALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTKAVLDGDLDKFIEASLK 294


>gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
 gi|226739124|sp|B7K0A6|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
          Length = 365

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 218/352 (61%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ +L       D       +  L      P  W N   A+  +++   L +++    +
Sbjct: 12  QIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +L D   + EL   E+D ++ +E   NL ++  E++  + + LLSG  DS  A L +
Sbjct: 72  WMGQLEDLKAIAELLELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRW E++ +K    EI +G+EAGIKSATL I+G  AYG+L
Sbjct: 132 NAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240
           KGE+G HRLVRISP+++N +R TSF+ I V P + ++ +++EI E D  I T R+ G GG
Sbjct: 192 KGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVR+ H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +      
Sbjct: 252 QNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E  WG QIR+YV  PYQMVKD+RTN E T  + V+DG LD F+++ L 
Sbjct: 312 GDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 363


>gi|288575018|ref|ZP_06393375.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570759|gb|EFC92316.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 336

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 161/330 (48%), Positives = 212/330 (64%), Gaps = 2/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+     P  W    +A+ +  +   L++ IS    +     D ++L EL  EEDD  + 
Sbjct: 8   LHEIMALPDFWG-RDDAQRISTDLARLESRISSWDRMSSEYQDLVVLAELLDEEDDQELE 66

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E     + +   ++    E LL+G+ D N+A + VHAG+GG +SQDWA ML RMY RW 
Sbjct: 67  AEFFSRSESLSKSMDAFSMELLLNGDYDGNNAIMTVHAGSGGLDSQDWAEMLYRMYLRWC 126

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E   +KT+ L+    EE GIK+ TLL++G  AYG+L+ E GVHRLVRISP+D+  RRHTS
Sbjct: 127 ESNHYKTKILDYQRDEEGGIKTVTLLVEGDFAYGYLQSEVGVHRLVRISPFDTAKRRHTS 186

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P + D +E++I   D RIDT+RASGAGGQHVN TDSAVRITHIPTG+VV CQ 
Sbjct: 187 FASVDVAPELPDDVEVDIRTEDLRIDTFRASGAGGQHVNMTDSAVRITHIPTGIVVSCQN 246

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH NKA A  +LR KLYE  + +R++  +     K EI WG QIRSYVL PY MVKD
Sbjct: 247 ERSQHMNKAVAMQVLRGKLYERSMSERQDTLDSLHDKK-EISWGNQIRSYVLHPYTMVKD 305

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            RT  E  + + VLDGDL+ F+ + L  +K
Sbjct: 306 HRTGEETGNAAAVLDGDLERFILSYLRWRK 335


>gi|240168635|ref|ZP_04747294.1| peptide chain release factor 2 [Mycobacterium kansasii ATCC 12478]
          Length = 376

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 218/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    ++  L  +  DP LW +   A+ +  E  H    +  ++++
Sbjct: 16  LDSTLTTVERVLDVDALRAKIDKLEHEASDPKLWDDQARAQRVTSELSHAQGELRRVEQL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL---QRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +  ++     + +  E+E  +  +LLSGE D  +A +
Sbjct: 76  RSRLDDLPVLYELAAEEEGEAAAEALAEADAELKALHAEIEATEVRTLLSGEYDEREALV 135

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 136 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 195

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 196 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  
Sbjct: 256 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKRLEERAELDAL 315

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +       WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 316 KGEGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 369


>gi|313847717|emb|CBY16707.1| putative peptide chain release factor 2 [Chlamydophila psittaci
           RD1]
          Length = 368

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 164/358 (45%), Positives = 222/358 (62%), Gaps = 8/358 (2%)

Query: 3   LSRQLNCL-------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
           L ++L  L       G   D +   Q LS L  +T     WQ+V  A  +      L   
Sbjct: 5   LDKRLEGLLTGLALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIASLKRQ 64

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           IS  +E + R+ +    L       D  + ++        +  +   + + LLSGE D N
Sbjct: 65  ISHYEEFKVRVDNLAFFLNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKN 124

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G 
Sbjct: 125 PCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGD 184

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+
Sbjct: 185 YAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRS 244

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E 
Sbjct: 245 SGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEK 304

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             I   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 305 QLIDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362


>gi|254520266|ref|ZP_05132322.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
 gi|226914015|gb|EEH99216.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
          Length = 325

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 156/323 (48%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W+++  A+ + +E + + + I   + +  R+ D  IL EL  E+D    + E  
Sbjct: 1   MQENGFWEDIKRAEEVTKESKRIKDKIDRYESLVSRIEDVEILAELIDEDD-EESIDEVI 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ I+ +VE  + E LLSGE D NDA L +HAG GG+++ DW  MLLRMYTRW EKR 
Sbjct: 60  REIRSIEKDVEGYRIELLLSGEYDRNDAILTLHAGVGGSDANDWTEMLLRMYTRWCEKRG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+  +G+EAGIKS TL +KG  AYG+LK E+GVHRLVRISP+++N +R TSF+S+
Sbjct: 120 FKVETLDYLEGDEAGIKSVTLKVKGEFAYGYLKAEKGVHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI   D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTKDQDIEIRSEDLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQSERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             NK  A  ML++KL +L+ +  +E          ++GWG QIRSYV  PY MVKD RT 
Sbjct: 240 FSNKDTAMAMLKSKLIDLKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNMVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  + + V++G++D+F+ A L 
Sbjct: 300 EETANLNAVMNGEIDNFITAYLK 322


>gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
 gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
          Length = 372

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 165/349 (47%), Positives = 215/349 (61%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  QL  L    D       ++ L  +   P  W +  +A     E       +   + +
Sbjct: 20  IREQLTLLADYVDPKALEAHVAELEQEMGAPGFWDSQEKAAKTSAEHARASRKLDTYRTL 79

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L E+A E  D  +  E ++ +   +  +E  + E L SG  D  DA + V+
Sbjct: 80  VSDVEDLEPLAEMAQE--DPELEAELAEQIASAERRLEQLEEERLFSGRYDGGDALVTVN 137

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDWA M+LRM  RWAEKR F  E LE+  GEEAGIKSAT  +KG NAYG   
Sbjct: 138 AGAGGTDAQDWAEMVLRMEMRWAEKRGFDVELLEVSAGEEAGIKSATFRVKGENAYGLYG 197

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVR+SP+DS +RR TSF+ + V PVV+D+ E+EI + D ++DTYRASGAGGQH
Sbjct: 198 AEKGVHRLVRLSPFDSANRRQTSFAGVEVAPVVEDAAEVEIDDDDLQVDTYRASGAGGQH 257

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH P+G+VVQCQ ERSQ  N+A A  MLR+KL ELE ++R+E     +  
Sbjct: 258 VNKTDSAVRITHRPSGIVVQCQNERSQSSNRATAMAMLRSKLVELEERRRQEEIAKEKGE 317

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             ++ +G QIRSYVL PY MVKD RT  E      VLDGDLD F++A L
Sbjct: 318 AQDVNFGSQIRSYVLHPYSMVKDHRTEFEIGDTGRVLDGDLDGFVRAYL 366


>gi|51598335|ref|YP_072523.1| peptide chain release factor 2 [Borrelia garinii PBi]
 gi|51572906|gb|AAU06931.1| peptide chain release factor 2 [Borrelia garinii PBi]
          Length = 350

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 151/347 (43%), Positives = 215/347 (61%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 5   KAFGGSFDKKEIQDKIEKYEKEIHQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+   E D   +         ++ + +     S    E D N A+L +H+GAGG
Sbjct: 65  DLSDLCEIVENEKD---INSLEIEFNVLEKQYKNLLTISYFKEELDINSAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSITIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K ++     +  K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQEVKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|15610242|ref|NP_217621.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Rv]
 gi|31794284|ref|NP_856777.1| peptide chain release factor 2 [Mycobacterium bovis AF2122/97]
 gi|121638990|ref|YP_979214.1| peptide chain release factor 2 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662959|ref|YP_001284482.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148824297|ref|YP_001289051.1| peptide chain release factor 2 [Mycobacterium tuberculosis F11]
 gi|167969713|ref|ZP_02551990.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|215405101|ref|ZP_03417282.1| peptide chain release factor 2 [Mycobacterium tuberculosis 02_1987]
 gi|215412969|ref|ZP_03421670.1| peptide chain release factor 2 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428558|ref|ZP_03426477.1| peptide chain release factor 2 [Mycobacterium tuberculosis T92]
 gi|215432061|ref|ZP_03429980.1| peptide chain release factor 2 [Mycobacterium tuberculosis EAS054]
 gi|215447387|ref|ZP_03434139.1| peptide chain release factor 2 [Mycobacterium tuberculosis T85]
 gi|218754875|ref|ZP_03533671.1| peptide chain release factor 2 [Mycobacterium tuberculosis GM 1503]
 gi|224991482|ref|YP_002646171.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253797794|ref|YP_003030795.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|254233729|ref|ZP_04927054.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|254365733|ref|ZP_04981778.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254552185|ref|ZP_05142632.1| peptide chain release factor 2 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188141|ref|ZP_05765615.1| peptide chain release factor 2 [Mycobacterium tuberculosis CPHL_A]
 gi|260202247|ref|ZP_05769738.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289444669|ref|ZP_06434413.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289448784|ref|ZP_06438528.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289553103|ref|ZP_06442313.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289571312|ref|ZP_06451539.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289575817|ref|ZP_06456044.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289746915|ref|ZP_06506293.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289751781|ref|ZP_06511159.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289755223|ref|ZP_06514601.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289759231|ref|ZP_06518609.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|289763284|ref|ZP_06522662.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|294993388|ref|ZP_06799079.1| peptide chain release factor 2 [Mycobacterium tuberculosis 210]
 gi|297635740|ref|ZP_06953520.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732739|ref|ZP_06961857.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526578|ref|ZP_07013987.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777415|ref|ZP_07415752.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|313660071|ref|ZP_07816951.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2076680|emb|CAB08395.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           tuberculosis H37Rv]
 gi|31619879|emb|CAD96819.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           bovis AF2122/97]
 gi|121494638|emb|CAL73119.1| Probable peptide chain release factor 2 prfB [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599258|gb|EAY58362.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|134151246|gb|EBA43291.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148507111|gb|ABQ74920.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148722824|gb|ABR07449.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           F11]
 gi|224774597|dbj|BAH27403.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319297|gb|ACT23900.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|289417588|gb|EFD14828.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289421742|gb|EFD18943.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437735|gb|EFD20228.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289540248|gb|EFD44826.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289545066|gb|EFD48714.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289687443|gb|EFD54931.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289692368|gb|EFD59797.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289695810|gb|EFD63239.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289710790|gb|EFD74806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|289714795|gb|EFD78807.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|298496372|gb|EFI31666.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214303|gb|EFO73702.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|326902672|gb|EGE49605.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           W-148]
 gi|328457573|gb|AEB02996.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           4207]
          Length = 378

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 220/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E+
Sbjct: 19  LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE   +     ++    L+ ++ ++E  +  +LLSGE D  +A +
Sbjct: 79  RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 138

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 139 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 198

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 199 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 258

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  
Sbjct: 259 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRLEERAELDAL 318

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++      WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +  +
Sbjct: 319 KADGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 372


>gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
 gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
          Length = 365

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 155/351 (44%), Positives = 227/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +++ L    + +     +     KT DP  W N  EA+  M+  +     ++     
Sbjct: 10  ITTRIDNLQVHLNIEQKQIEIQNEEEKTFDPSFWDNPSEAEEFMKTLKGKKKWVNDYNVA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +  +LLE   E +      +     Q+I   VE  +F+++LS E D   A L++ 
Sbjct: 70  KSGLEELQVLLEFYNEGEAEE--SDVIKQYQKILDVVEELEFKNMLSEEGDDLSAVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  WAEK+ FK + L   +G+ AGIK+ TL I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWAQMLMRMYLMWAEKQGFKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIEI+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEITTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++ H PTG+ + C + RSQH N+ +A  ML+++LYE+EL+K+ E     E+S
Sbjct: 248 VNKVETKVQLVHHPTGIQISCSETRSQHDNRNRAMQMLKSQLYEIELEKQREQREDIEAS 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DG +D F+KA L +
Sbjct: 308 KKKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDSVMDGHIDQFLKAYLMM 358


>gi|211938843|pdb|2JL5|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938901|pdb|2JL7|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|237823553|pdb|2WH1|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823612|pdb|2WH3|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit
          Length = 351

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 155/352 (44%), Positives = 208/352 (59%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + +
Sbjct: 1   LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   LLEL  EE      +     L+    +++    ++LL+      +A L + 
Sbjct: 61  ES---DLQGLLELM-EELPAEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQ 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L 
Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ 
Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE        
Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 297 VEPIEWGSQIRSYVL-DKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 347


>gi|238796545|ref|ZP_04640052.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
 gi|238719523|gb|EEQ11332.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
          Length = 303

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 167/302 (55%), Positives = 214/302 (70%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           ++  ++ I ++   + D   LLELA+E DD     E    L  +  ++   +F  + SGE
Sbjct: 1   MEEIVTTIDQLDQGMEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGE 60

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ 
Sbjct: 61  YDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIK 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID
Sbjct: 121 IIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK
Sbjct: 181 VYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 241 KNADKQVLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASL 299

Query: 352 AI 353
             
Sbjct: 300 KA 301


>gi|225568858|ref|ZP_03777883.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
 gi|225162357|gb|EEG74976.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
          Length = 312

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 155/307 (50%), Positives = 214/307 (69%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L   +  I  + D   D  +L+E++ EE+D S ++E    +Q  + + E  +  
Sbjct: 1   MKELKDLQELVKTIHSLYDGYEDINLLIEMSYEENDASAVKEMEAEIQSFEEQFEALRIR 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA ML RMY+R+AE++ +  E L+  DG+  GI
Sbjct: 61  TLLSGEYDACNAIVTIHAGAGGTESCDWAGMLYRMYSRFAERKGYSMEVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  +KG NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IEI++
Sbjct: 121 KTVTFEVKGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+ KL 
Sbjct: 181 EELKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHFNKEKAMQMLKVKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY MVKD RTN E ++ + VLDG +D 
Sbjct: 241 LLKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNEECSNVTAVLDGGIDM 300

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 301 FINAYLK 307


>gi|254447294|ref|ZP_05060761.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
 gi|198263433|gb|EDY87711.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
          Length = 300

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 160/297 (53%), Positives = 210/297 (70%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  +  I   L D   L+E+A EE D   L    D++  +   VE  +F  + SGE D  
Sbjct: 2   VRGLDRITSGLGDAGDLIEMAKEEGDEETLAAVEDDIAELTDAVENLEFRRMFSGEMDEK 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWANMLLRMY RW ++  FK E +E+ +G+ AGIKSAT+ I+G 
Sbjct: 62  NAYLDIQAGSGGTEAQDWANMLLRMYLRWCDQHGFKNEIVELSEGDVAGIKSATIHIQGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSF+S+++ P VDDS +I+I+ +D R+DTYR+
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFDIDINPADLRVDTYRS 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH P+GVVV CQ +RSQH N+  A   L+AKL+ELE+QKR  +
Sbjct: 182 SGAGGQHVNTTDSAVRITHAPSGVVVSCQNQRSQHANRDFAMKQLKAKLWELEMQKRNAV 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L 
Sbjct: 242 KQEAEDNKADIGWGSQIRSYVL-DASRIKDLRTGVETGNTQAVLDGSLDPFIEASLK 297


>gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
 gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
          Length = 345

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 139/333 (41%), Positives = 211/333 (63%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              ++  L   +  P  W     A+  ++E       +  ++     L D+  +LEL   
Sbjct: 1   MNAKIKDLEQLSAQPDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELLDL 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S+L E    + R+  E++  + + LLSG  D   A L ++AGAGGT++QDW+ MLL
Sbjct: 61  EQDESLLLEAESTVNRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQDWSEMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW+E+  ++ + +E  +G+EAG+KS T+ + G  AYG+LKGE+G HRLVRISP+++
Sbjct: 121 RMYTRWSEQNGYQFKLIEKSEGDEAGLKSVTMEVYGRYAYGYLKGEKGTHRLVRISPFNA 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P++D  +E++I + D  I T R+ GAGGQ+VN  ++AVRITH+PT 
Sbjct: 181 NGKRQTSFAGVEVMPILDQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTS 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + V+C QERSQ +NK +A  +L +KL  +  ++R +          E  WG QIR+YV  
Sbjct: 241 ISVRCTQERSQLQNKEKAMALLTSKLLVIAQEQRTQAIADIRGDMVEAAWGNQIRNYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           PYQMVKDLRT++E T+  DV++GDL+ F++A L
Sbjct: 301 PYQMVKDLRTSVETTAVDDVMNGDLEAFIQAYL 333


>gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
          Length = 338

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 153/337 (45%), Positives = 217/337 (64%), Gaps = 2/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             Q     + K ED   W N+  ++ +++  + L+  +         L +  IL EL  E
Sbjct: 1   MKQEKQQNDLKMEDADFWNNLELSQHIVKRNKELERTLDIYSSAFSELEEVEILFELTKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D  + +E    +  +  ++E  + ++LL GE D N+A L +HAG+GG ++QDWA MLL
Sbjct: 61  --DSELEKELEQCINELSEKMEQLKIQTLLDGEYDGNNAILSIHAGSGGLDAQDWAQMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+     ++   L+     EAGIKS TL I+GPNAYG+LK E+GVHR+VRISP+DS
Sbjct: 119 RMYLRFCHDMGYRVIELDSLSDSEAGIKSVTLQIEGPNAYGFLKSEKGVHRIVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + +RHTSF+S+ V P +DD++E++I  +D +IDTYRASGAGGQHVN TDSAVRITHIPTG
Sbjct: 179 SGKRHTSFTSVDVIPEMDDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V+ CQ ERSQH N+  A  ML +KL ++++++ +E         ++I WG QIRSYV Q
Sbjct: 239 IVITCQNERSQHSNRETAMKMLFSKLMDIKIREHKEKIEDISGEYSQIAWGSQIRSYVFQ 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PY +VKD RTN E  S   V+DG++  F+ A L  +K
Sbjct: 299 PYTLVKDHRTNHEIGSVQSVMDGNIMPFINAYLKQQK 335


>gi|188534903|ref|YP_001908700.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
 gi|188029945|emb|CAO97829.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
          Length = 300

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D   LLELA+E +D     E    L  +  ++   +F  + SGE DS 
Sbjct: 2   VDTLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLAELEFRRMFSGEYDSA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G 
Sbjct: 62  DCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 242 KQTAEDNKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 298


>gi|329769029|ref|ZP_08260451.1| peptide chain release factor 2 [Gemella sanguinis M325]
 gi|328839520|gb|EGF89096.1| peptide chain release factor 2 [Gemella sanguinis M325]
          Length = 372

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ +++         ++  QR++ +     D   W +   A  L+ E + +   +     
Sbjct: 12  EIEKRITEFKTSLKIEDKEQRVAEIENMMLDADFWNDSDNASALVTESKSIKKELDEFSN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +E+D  I  +  + +  +K  VE   F  L S E D+N+A L++
Sbjct: 72  MLDYLEHSQEMVEFLRDEEDKEIYNDLEETVATLKDSVEDFSFRLLFSEEYDNNNAILDI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DWA ++LRMY R+  K+  K   L    G+  G+KSAT+ ++G  AYG L
Sbjct: 132 HAGAGGTDATDWAEIMLRMYERFFSKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGG 240
           KGE+GVHR++RISP+D + +RHTSF+SI V P   D  I IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVIRISPFDPSGKRHTSFASIDVMPEFSDDEINIEINNDDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK  A   L++KLY+LEL+++E+      
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDTAMKNLKSKLYQLELEEKEKELASIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DGD+ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGDIIDFIDAYL 362


>gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group]
          Length = 457

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 221/358 (61%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++  +      D   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 89  VELALARVGEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 148

Query: 60  KEIQDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            +++ ++ +   +++L  E D  D  +L+E S  ++ +   ++  +   LLSG  D   A
Sbjct: 149 NDLKSQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 208

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 209 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 268

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 269 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 328

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  +  ++R    
Sbjct: 329 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 388

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 389 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 446


>gi|291517989|emb|CBK73210.1| bacterial peptide chain release factor 2 (bRF-2) [Butyrivibrio
           fibrisolvens 16/4]
          Length = 338

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 211/324 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +   +   M+E + + + ++ I +++D   +    +EL  EE+D  I+   +
Sbjct: 1   MEAPDFWTDAQVSTAKMKELKSMKDDVAVIDKLEDLYKEIEDYIELGNEEEDQEIVDTVA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++  + ++E  + ++LLSGE DS+ A + +H+GAGG E+ DW  ML RMY+RWA    
Sbjct: 61  LLIEEFENDLESLRMKTLLSGEYDSDSAIVTLHSGAGGVEACDWVQMLYRMYSRWASDMG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + L+  +G+EAGIKS T  + G NAYG+LK E+G+HRLVRISP+++  +R TSF+S 
Sbjct: 121 FAVDELDYQEGDEAGIKSVTFQVNGDNAYGYLKSEKGIHRLVRISPFNAQGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +++EI + D RIDTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ
Sbjct: 181 DVMPDIEEDVDVEIRDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+ KL  L+ ++    A+      +EIGWG QIRSYVLQPY MVKDLRT 
Sbjct: 241 FQNKDKAMQMLKTKLLLLKQEENAAKASGIRGEVSEIGWGNQIRSYVLQPYTMVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG L  FM A L  
Sbjct: 301 EESGNADAVLDGKLTPFMNAYLKW 324


>gi|330444184|ref|YP_004377170.1| peptide chain release factor 2 [Chlamydophila pecorum E58]
 gi|328807294|gb|AEB41467.1| Peptide chain release factor 2 [Chlamydophila pecorum E58]
          Length = 344

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 154/337 (45%), Positives = 214/337 (63%), Gaps = 1/337 (0%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +     L  L  ++   + W++V++A  +  +   L   +S   E+Q ++      L   
Sbjct: 2   EGKEATLRELEKQSAQENFWEDVVKAGKISEQIAALKRQLSEYSELQKKIETIEFFLNDN 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
               D  + +E        +  +   + + LLSGE D N  +L ++AGAGGTES DW  M
Sbjct: 62  EACADPEVGKELEKEFAFCESCLAVWETQRLLSGEVDKNSCFLSINAGAGGTESCDWVEM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+RWA +  +K + ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+
Sbjct: 122 LFRMYSRWASRHHWKVDVIDRLDGEVAGIKHITLKLTGEYAYGYAKAESGVHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           DSN++RHTSF+S+ V+P VDD I+IEI  +D RIDT+R+SGAGGQHVN T+SAVRITH+P
Sbjct: 182 DSNAKRHTSFASVDVFPEVDDQIQIEILPNDLRIDTFRSSGAGGQHVNVTESAVRITHLP 241

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+VV CQ ERSQ +N+     +LRA+LY+ ELQ+R E   +    K EI WG QIR+YV
Sbjct: 242 TGIVVSCQNERSQLQNRESCMKVLRARLYQRELQERLERRLLERKDKKEIAWGSQIRNYV 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            QPY +VKD+RT  E  +   ++DG+ LD+F+K  LA
Sbjct: 302 FQPYTLVKDVRTGYEVGNIQAMMDGELLDEFIKVYLA 338


>gi|89890713|ref|ZP_01202222.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
 gi|89516858|gb|EAS19516.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
          Length = 386

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 145/350 (41%), Positives = 215/350 (61%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L      +     ++ L  KT  P  W +   A+++M+E ++     +     
Sbjct: 28  LQERVIALKDYLQIEAKEIEITNLEEKTFSPDFWNDAKAAELIMKELRNKKQWTTDYATA 87

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D  +L E   E D      E            E  +F+++LS E D   A L++ 
Sbjct: 88  TTLAEDTEVLYEFFKEGDASE--DEVMAKYNAAVDITEKLEFKNMLSNEGDDMSAVLQIT 145

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  WA+K  +K + L    G+ AGIK+ TL I+G  ++GWLK
Sbjct: 146 AGAGGTESCDWAEMLMRMYMMWAQKNNYKVKELNFQAGDVAGIKTVTLEIEGDYSFGWLK 205

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEI+I+ +D + D  R+SGAGGQ+
Sbjct: 206 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIDINPADIKWDFARSSGAGGQN 265

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++L+E+ELQKR    +  ES 
Sbjct: 266 VNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQLFEIELQKRNAARDEIESG 325

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V++GD+D F+KA L 
Sbjct: 326 KMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGDIDAFLKAFLM 375


>gi|313675052|ref|YP_004053048.1| bacterial peptide chain release factor 2 (brf-2) [Marivirga
           tractuosa DSM 4126]
 gi|312941750|gb|ADR20940.1| bacterial peptide chain release factor 2 (bRF-2) [Marivirga
           tractuosa DSM 4126]
          Length = 363

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 147/350 (42%), Positives = 216/350 (61%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D++  V+ +  L   +  P  W +  EA+  M+  Q L        E+
Sbjct: 9   LKARVEALRGYLDYNKKVEEIKELELVSAQPDFWNDSDEAEKTMKVIQGLKEWTKHFDEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   +     E     +     +E S   ++   + E  + + +LS E D   A L++ 
Sbjct: 69  SELYGEVETYYEFLEMGESSE--EEVSKAYKKALTKTEELELKKMLSSEEDQLSAMLQIT 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA +L+RMY  W E   +K   ++  +G+ AG+KS TL   GP AYG+LK
Sbjct: 127 PGAGGTESNDWAGILMRMYIMWGEANGYKVREVDFQEGDVAGVKSVTLEFDGPQAYGFLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S++VYPVVDDSIEI+I  +D  + T R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSGGRRHTSFASVYVYPVVDDSIEIDIHPNDVELHTSRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+VV CQ  R+Q  N+ +A  ML+++LY++E++KR    N  E+ 
Sbjct: 247 VNKVETKVQLTHKPTGIVVVCQANRTQLGNREEAMKMLKSQLYQIEVEKRSAERNEVEAG 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I +G QIR+YVL PY+++KD RT +E+T   +VLDGDL+D++KA L 
Sbjct: 307 KKKIDFGSQIRNYVLHPYKLIKDARTGVERTDVQNVLDGDLNDYIKAYLM 356


>gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 369

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 227/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L         D+    L+ L     DP +W +  + + L R    L + +  I  +
Sbjct: 13  LAERLERARAFLHIDDRRTELAELEAALADPGVWSDPAKGRELSRRYGTLKDDVELIARL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+ + +E+A  +DD  +  E  D L  +   ++  +  SLL+GE D +DA LE+H
Sbjct: 73  DAMLADSNVAIEMA--DDDPDLAAEAEDVLTSLAAHLDAIEIRSLLAGEFDESDAVLEIH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGT++QDWA M+LRMY RWA+ R F+ E  E+ +G+EAGI SAT +++G  AYG L 
Sbjct: 131 SGAGGTDAQDWAQMMLRMYERWAQGRGFEFEVDEVTEGQEAGILSATAIVRGRYAYGLLV 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D+  RR TSF+S+ V P+ +D+ E+ I E D RIDTYR+SGAGGQH
Sbjct: 191 AERGVHRLVRISPFDAQHRRQTSFASLDVTPLAEDAGEVVIDEKDLRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VV CQ ERSQ +N+A+A  +L +KL +   +++    +     
Sbjct: 251 VNVTDSAVRITHLPTGIVVSCQNERSQLQNRAKAMQILVSKLEQRRREEQRAQLDALSGP 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + ++GW  Q+RSYVL PYQ+VKD R+  E  +   VLDG LD F++A LA ++
Sbjct: 311 RVDVGWANQVRSYVLAPYQLVKDHRSGYEDRNVQAVLDGRLDPFIEAFLAWRR 363


>gi|225165725|ref|ZP_03727521.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
 gi|224800034|gb|EEG18467.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
          Length = 341

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 157/327 (48%), Positives = 207/327 (63%), Gaps = 3/327 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDCSILQ 86
                 W N   A+  + +   L  A+  +   + ++ D   L EL       +      
Sbjct: 1   MGASDFWDNNERAQKHINKVNGLKRAVLPLVAFRKKVDDLDALNELIEAGSPAEQEEFGA 60

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E +     +  E++  +  + L+G+ D N+A   + AGAGGTES DWA+ML RMYTRWAE
Sbjct: 61  ELTAQAAAMIGELDDLEINAFLTGQFDRNNAIFSIQAGAGGTESNDWADMLFRMYTRWAE 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +R F  E  ++  G++AGI  ATLLIKG NAYG+ K E+GVHRLVRISP+DSN RRHTSF
Sbjct: 121 RRGFTVEVQDVQPGDQAGISKATLLIKGENAYGYCKAERGVHRLVRISPFDSNQRRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ V   ++D I+IEI E + R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E
Sbjct: 181 CAVDVIAEINDEIKIEIPEDEIRVDVYRSSGKGGQGVNTTDSAVRLTHIPTGLVVVCQNE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ KNKA A ++L+A+LYE +  ++    +     K EIGWG QIRSYVLQPYQMVKDL
Sbjct: 241 RSQIKNKASAMSILKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDL 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT +  +    VLDGD+D F+   L  
Sbjct: 301 RTGVNTSDTQGVLDGDIDRFINGWLRA 327


>gi|242066770|ref|XP_002454674.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
 gi|241934505|gb|EES07650.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
          Length = 467

 Score =  331 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 151/350 (43%), Positives = 222/350 (63%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + +++
Sbjct: 108 AQSVKLIKKRLKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQLE 167

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +++ +L LA EE+D  +  E+   L  +++  + K+  +LLS + DS   ++EV A
Sbjct: 168 QELIEHIEMLRLAREENDNELEMESMRALADMRISAKEKELNALLSRDNDSCSCFIEVQA 227

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++ MY  WA++R +    +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 228 GAGGTESMDWAAMVMNMYKSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKA 287

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ D+    +I +SD RI+ +R+ G GGQH
Sbjct: 288 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSRYQIKDSDLRIERFRSGGPGGQH 347

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            NTT+SA+RI HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      S
Sbjct: 348 ANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQS 407

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 408 LNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|310766541|gb|ADP11491.1| peptide chain release factor 2 [Erwinia sp. Ejp617]
          Length = 300

 Score =  331 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D   LLELA+E +D     E    L  +  ++   +F  + SGE DS 
Sbjct: 2   VETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLGELEFRRMFSGEYDSA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G 
Sbjct: 62  DCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 242 KQTAEDNKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 298


>gi|134104518|pdb|2IHR|1 Chain 1, Rf2 Of Thermus Thermophilus
          Length = 365

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 213/353 (60%), Gaps = 5/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L  LGG+FD      RL  L  + EDP LW +   A+ + +E   L   +   + 
Sbjct: 5   RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   LLEL +EE      +     L+    +++    ++LL+      +A L +
Sbjct: 65  LES---DLQGLLEL-MEELPAEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE       
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 301 EVRPIEWGSQIRSYVL-DKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352


>gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF4000_15H13]
          Length = 328

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 167/323 (51%), Positives = 224/323 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W     AK ++ E   + + +   + +  R+ +   L+EL  EEDD  + +E +
Sbjct: 1   MAQPGFWDKQEAAKAVIEESNSIKSWLEPWQALDGRVSELRALVELLEEEDDEELAEEFA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +   VE  +  ++L G+ D   A + +H GAGGTESQDWA ML+RMYTRWAE+  
Sbjct: 61  SGVDELTKGVEALELRTMLQGDDDHRGAIITIHPGAGGTESQDWAQMLVRMYTRWAERGG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F    L++   EEAGIKSATL I G +AYG+LK E GVHRLVRISP+D+ +RRHTSF+S+
Sbjct: 121 FTVNVLDLQPAEEAGIKSATLEINGESAYGFLKAEGGVHRLVRISPFDAQARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP VDDSIEIEI++ D R+DTYRASGAGGQHVN TDSAVR+TH PTG+VVQCQQERSQ
Sbjct: 181 FIYPQVDDSIEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN+A A  ML A+LY+  L+++++   + E+SK +IG+G QIRSYV QPY MV D RT 
Sbjct: 241 HKNRATAMKMLLARLYQHALEEKKKERAVLEASKRDIGFGNQIRSYVFQPYTMVNDHRTE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           ++ T    V+DG +D F++A L 
Sbjct: 301 LKITDVQSVMDGAIDPFIEAYLK 323


>gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 367

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 218/354 (61%), Gaps = 3/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L    + +  +   +   Q +  L+ +  +P LW +  +A+ +  +  H  + +  I E
Sbjct: 12  ELRDTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q RL D  +L+E+A   DD    +E    L  I   ++  + ++LL+GE D   A + +
Sbjct: 72  LQRRLDDLDVLVEMAK--DDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  +    L+    EEAGIKSAT  I  P A+G L
Sbjct: 130 RAGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVR+SP++S  +R TSF+++ V P+++ +  IEI E+D R+D +R+SG GGQ
Sbjct: 190 SVEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENDMRVDVFRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+++L  ++  ++E       +
Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQR-EQEAATKKELA 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+RSYVL PYQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 309 GNITASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362


>gi|156932658|ref|YP_001436574.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530912|gb|ABU75738.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
          Length = 293

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 210/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L +++ ++   +F  + SGE DS D YL++
Sbjct: 1   MSQGLDDVAGLLELAVEADDEETFNEAVAELDQLEAKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  A+GWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|223982761|ref|ZP_03632989.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
 gi|223965261|gb|EEF69545.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
          Length = 327

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 204/325 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             + H W +   A+ ++R+   +    +   +++  L      ++   +  D  + +   
Sbjct: 1   MNEEHFWDDPKAAQNVIRQCNGMKELEAKYHQMEQSLASLQETVDELNQNFDEELKELLD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              Q    + E  +   LLS   D N+A LE+H GAGGTESQDWA+ML RMY RWAE++ 
Sbjct: 61  MEYQDTLNQFEDFEVMVLLSHPYDKNNAILELHPGAGGTESQDWASMLYRMYCRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   L+  +GEEAGIKS ++LI+G  AYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+
Sbjct: 121 YKVTLLDYQEGEEAGIKSVSILIEGDMAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P   D IEI I E D  + T RASGAGGQH+N TDSAVR+TH PTG+VV CQ ERSQ
Sbjct: 181 DVMPQFSDEIEITIDERDLDVVTMRASGAGGQHINKTDSAVRMTHKPTGIVVSCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ +  NML++KLY+  ++++E         +  I WG QIRSYV  PY MVKD RT 
Sbjct: 241 IQNRERCMNMLKSKLYQRMIEEQEAKLAAIRGEQKNIEWGSQIRSYVFCPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  S  +V+DGDLD F+ + L  +
Sbjct: 301 YEMGSVQNVMDGDLDGFIFSYLKSQ 325


>gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
 gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
          Length = 312

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 156/309 (50%), Positives = 213/309 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L + I  I+ +     +   L+E+A+E +D  + +E       ++      + +
Sbjct: 1   MKERMLLLDKIEPIENLIKNANNIYELVEMAIESNDTEMEKELETECIELQKVFNELETK 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+EAGI
Sbjct: 61  NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  +  ++G  AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI++
Sbjct: 121 KQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINQ 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+AKLY
Sbjct: 181 ADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LE +K ++        KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG++D+
Sbjct: 241 QLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDE 300

Query: 346 FMKATLAIK 354
           F+ A L  +
Sbjct: 301 FISAYLKQQ 309


>gi|224371835|ref|YP_002605999.1| PrfB [Desulfobacterium autotrophicum HRM2]
 gi|223694552|gb|ACN17835.1| PrfB [Desulfobacterium autotrophicum HRM2]
          Length = 329

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 157/323 (48%), Positives = 208/323 (64%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
                  W +   A   ++ER  + + I    +I   + D   LLELA EE+D  + +E 
Sbjct: 1   MIAQEDFWNDPDTATAKLKERTRISDLIETWDKIFAEIEDAETLLELAHEEEDKEVEREV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L R+  +V+      +L GE D+  A + ++AGAGGT+SQDW  ML RMYTRW +K+
Sbjct: 61  ELQLNRLGQKVKKFSVAIMLDGEDDTKSAIVSINAGAGGTDSQDWTEMLFRMYTRWIDKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
             K + ++   G+EAGIK  T  + G  +YG LK E GVHRLVRISP+++  +R TSF+S
Sbjct: 121 GLKLQMIDYQPGDEAGIKGVTFSVSGEYSYGLLKVESGVHRLVRISPFNAGGKRQTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP + D I +EI E D RID YRASGAGGQHVN T SAVRITH+PTGVVVQCQQE S
Sbjct: 181 VFVYPELKDEIRVEIDEGDLRIDVYRASGAGGQHVNKTSSAVRITHLPTGVVVQCQQEPS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+NK  A  +L+++LY+LE +K+         +K +I WG QIRSYVL PY+MVKD RT
Sbjct: 241 QHRNKEIAMKVLQSRLYQLEKEKQNRKMQDLHDTKDDIAWGSQIRSYVLHPYRMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           + E      VLDGDLD F++ TL
Sbjct: 301 DYEVGDVDRVLDGDLDQFIEETL 323


>gi|301335943|ref|ZP_07224187.1| peptide chain release factor 2 [Chlamydia trachomatis L2tet1]
          Length = 334

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 206/327 (62%), Gaps = 1/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +      W +V  A  +      L   +S   E+++++      LE      D  + 
Sbjct: 1   MEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQ 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  M+LRMY RWA
Sbjct: 61  KELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
               ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTS
Sbjct: 121 SSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ 
Sbjct: 181 FASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD
Sbjct: 241 ERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +RT  E  +   ++DG+ LD F+KA L
Sbjct: 301 VRTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|330817652|ref|YP_004361357.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
 gi|327370045|gb|AEA61401.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
          Length = 299

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 161/297 (54%), Positives = 218/297 (73%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ +  +   L D   L ELA EE+D   L  +      ++  V   +F  + S  AD N
Sbjct: 1   MTTLTTLDGDLRDAQDLFELAREENDEDTLLASEGEAAELEKRVAEIEFRRMFSNPADPN 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ + G 
Sbjct: 61  NCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESDGDVAGIKNATIKVTGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +D RIDTYRA
Sbjct: 121 YAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+  
Sbjct: 181 SGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L 
Sbjct: 241 QDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFIGASLK 296


>gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
 gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
          Length = 332

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 214/324 (66%), Gaps = 2/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQET 88
                 W +   AK  +     L + +   KE++ R+ D + L EL  EE     ++ + 
Sbjct: 1   MGSSSFWDDSNAAKSTVDRVSALKSVVVPYKELEARVEDFITLSELIEEEGASSELMDDA 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +    ++  ++  +  S LSG+ DS   +L ++AGAGGTES DWA+MLLRMY RWAE +
Sbjct: 61  GEESPELEKALDDLELLSFLSGKYDSGSCFLSINAGAGGTESCDWADMLLRMYRRWAESK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK   + I +GEEAGIK+ T+ I+GP A+G+LK E+GVHRLVR+SP+DSN RRHTSF+S
Sbjct: 121 GFKVTFVSILEGEEAGIKNCTMFIEGPMAFGYLKAERGVHRLVRVSPFDSNKRRHTSFTS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           I V P + D  E++I   D R+DT+RASGAGGQHVNTTDSA+R+TH+PTG+VV CQ ERS
Sbjct: 181 IDVVPDIGDEAEVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQMERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+A A  ML AKL EL+  +RE   +     K +IGWG QIRSYVL   + VKD RT
Sbjct: 241 QHKNRATAMKMLGAKLEELKQAEREAELDANAGEKNDIGWGSQIRSYVLDD-RRVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N   ++   VLDGD+D F+++ L 
Sbjct: 300 NHSTSNTDKVLDGDIDPFIQSFLR 323


>gi|161506411|ref|YP_001573523.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867758|gb|ABX24381.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 293

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 171/292 (58%), Positives = 209/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MTQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 TKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|148272488|ref|YP_001222049.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830418|emb|CAN01353.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 367

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 145/354 (40%), Positives = 218/354 (61%), Gaps = 3/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L    + +  +   +   Q +  L+ +  +P LW +  +A+ +  +  H  + +  I E
Sbjct: 12  ELRDTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q RL D  +L+E+A   DD    +E    L  I   ++  + ++LL+GE D   A + +
Sbjct: 72  LQRRLDDLDVLVEMAK--DDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  +    L+    EEAGIKSAT  I  P A+G L
Sbjct: 130 RAGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVR+SP++S  +R TSF+++ V P+++ +  IEI E++ R+D +R+SG GGQ
Sbjct: 190 SVEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENEMRVDVFRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+++L  ++  ++E       +
Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQR-EQEAATKKELA 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+RSYVL PYQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 309 GNITASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362


>gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
 gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
          Length = 324

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W N+ +A+ + ++ + + + I    +++ ++ D  +L E+ +E+DD     E  
Sbjct: 1   MQESGFWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEI-MEDDDEESANEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ I+ +++    + LL GE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 60  QTLRDIQAQIDDYNMKVLLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L++  G+EAGIKS TL + G  AYG+LK E+G+HRLVRISPY++N +R TSF+S+
Sbjct: 120 YSIETLDLLPGDEAGIKSVTLKVTGEYAYGYLKAEKGIHRLVRISPYNANGKRQTSFASM 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI   D +IDTYR+ GAGGQHVN TDSAVRITHIPTGVVVQCQ ERSQ
Sbjct: 180 EVLPELTKEQDIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E ++ + V+DG++D F+ A L  +
Sbjct: 300 VETSNVTSVMDGEIDMFINAYLKQQ 324


>gi|219559147|ref|ZP_03538223.1| peptide chain release factor 2 [Mycobacterium tuberculosis T17]
 gi|260206441|ref|ZP_05773932.1| peptide chain release factor 2 [Mycobacterium tuberculosis K85]
 gi|308369955|ref|ZP_07419655.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308371233|ref|ZP_07424282.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308372424|ref|ZP_07428636.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308373628|ref|ZP_07433110.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308374772|ref|ZP_07437352.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308375989|ref|ZP_07668163.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308377222|ref|ZP_07668462.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308378190|ref|ZP_07481848.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308379411|ref|ZP_07486192.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308380571|ref|ZP_07490411.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308406052|ref|ZP_07494953.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|54039054|sp|P66027|RF2_MYCBO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041597|sp|P66026|RF2_MYCTU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|308325955|gb|EFP14806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308329480|gb|EFP18331.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308333326|gb|EFP22177.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308336980|gb|EFP25831.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308340794|gb|EFP29645.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308344662|gb|EFP33513.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308348612|gb|EFP37463.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308353337|gb|EFP42188.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308357171|gb|EFP46022.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308361122|gb|EFP49973.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308364657|gb|EFP53508.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|323718336|gb|EGB27514.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CDC1551A]
          Length = 371

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 220/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE   +     ++    L+ ++ ++E  +  +LLSGE D  +A +
Sbjct: 72  RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRLEERAELDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++      WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +  +
Sbjct: 312 KADGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 365


>gi|88607992|ref|YP_506484.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
 gi|123491729|sp|Q2GDG2|RF2_NEOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|88600161|gb|ABD45629.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
          Length = 365

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L + +  +    D +    RL  +    + P LW++   A++L++E+  ++ ++   KE
Sbjct: 11  NLKKSVEVIRRQLDIEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D + ++ELA ++ +   +++    L  +K +++ K+ E L SGEAD ND  LE+
Sbjct: 71  LSIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
            +GAGGTES DWA MLLRMYTRWAE   KF+ + ++  +GEE GIKS TL + G NAYGW
Sbjct: 131 QSGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGW 190

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
            + E GVHRLVRISP+D+N++RHTSF+ I+V P ++  I I I E D +IDTYRASGAGG
Sbjct: 191 ARTETGVHRLVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SA+RITH+P+ +VVQ Q  RSQH+NKA+A  ML+++LYE+EL+K+EE  N   
Sbjct: 251 QHVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAAR 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + +  IGWG QIRSYVL PYQM+KDLRT  E  + + VLDGDLD F+ AT++
Sbjct: 311 NVEDSIGWGYQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 362


>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
 gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
          Length = 346

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 162/342 (47%), Positives = 221/342 (64%), Gaps = 1/342 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD D      + +  +      W +   A+   +    L   +  I E++++  +  I 
Sbjct: 3   YFDKDELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEIEIY 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +LA EE   ++ +E   +  +++ +++  + +  L+   D ++A L +H GAGGTESQD
Sbjct: 63  QQLAAEEG-ENLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPGAGGTESQD 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMY RWAE   ++ E LE   G+EAG+KS TLLI G  A+G+LKGE+GVHRLVR
Sbjct: 122 WAEMLLRMYRRWAESSGYQLETLEFSAGDEAGVKSVTLLISGDYAFGYLKGERGVHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DS+ RRHTSF+S+ V P +DD +E++I E+D RI+TYRASGAGGQHVN TDSAVRI
Sbjct: 182 ISPFDSSGRRHTSFASVDVLPELDDELEVDIDENDLRIETYRASGAGGQHVNKTDSAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH PTGVVVQCQ +RSQHKNK  A  +L +KL EL+ + + E          EI WG QI
Sbjct: 242 THQPTGVVVQCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLRGEHKEIAWGSQI 301

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RSYVL PY M+KD RT+ E+ +   VLDG LD+F++  L  K
Sbjct: 302 RSYVLHPYNMIKDHRTDFEEGNVDKVLDGYLDEFIEEYLKYK 343


>gi|255535765|ref|YP_003096136.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341961|gb|ACU08074.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
          Length = 370

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 150/349 (42%), Positives = 230/349 (65%), Gaps = 2/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + ++  L      +     +S    KT  P  W    +A++ M++ +     ++  +EI 
Sbjct: 11  NSRIADLYKYLQIEKKKIEISNDEEKTLSPEFWDKPKDAEIFMKQLRSKKKWVTDYEEIF 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            RL D  +L+E A E+ D    +E  +    +  ++E  +F+++LS E D   A L++ A
Sbjct: 71  SRLEDIQVLMEFAKEDPDSE--KELDEAFPVLLEKIEDLEFKNMLSNEGDELSAVLQITA 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA+ML+RMYT WAEK+ +K   L   +G+ AGIK+ TL I G  A+G+L+G
Sbjct: 129 GAGGTESCDWASMLMRMYTMWAEKQGYKLRELNYQEGDVAGIKTVTLEIDGEFAFGYLRG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DSN++RHTSF S++VYP+VDD+IEI I+ +D   +T R+SGAGGQ+V
Sbjct: 189 ENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFETMRSSGAGGQNV 248

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++AVR+ H PTG++++  + RSQ +NK +A  +LR++LYE+EL++R +  N  E+ K
Sbjct: 249 NKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEAGK 308

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +I WG QIR+YV+ PY++VKD+R+  E +    V++G+L  F+KA L 
Sbjct: 309 MKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGELTPFLKAFLM 357


>gi|237740862|ref|ZP_04571343.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
 gi|229431159|gb|EEO41371.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
          Length = 331

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 152/330 (46%), Positives = 221/330 (66%), Gaps = 1/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +   T + + W +  ++  +++      N +S  +++   + D  +L++   E  + S  
Sbjct: 1   MEKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFV-ESGEASFE 59

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E     + +K ++E  +   LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW 
Sbjct: 60  NELQTKHKILKSDIEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWC 119

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTS
Sbjct: 120 NLKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTS 179

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+
Sbjct: 180 FASVEVVPEVDENVEVEINPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQK 239

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD
Sbjct: 240 ERSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            RTN E  +   V+DG +DDF+ + L   K
Sbjct: 300 HRTNTEIGNVKAVMDGSIDDFINSYLRWIK 329


>gi|320535245|ref|ZP_08035369.1| peptide chain release factor 2 [Treponema phagedenis F0421]
 gi|320147898|gb|EFW39390.1| peptide chain release factor 2 [Treponema phagedenis F0421]
          Length = 320

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 160/306 (52%), Positives = 212/306 (69%), Gaps = 1/306 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M E + L + +   +E+Q  + D   L +LA E +D  +  E     Q++    E     
Sbjct: 1   MSELKVLRSRVEPWRELQTDIEDLQALYDLAEEAEDEQMTDEIDSVYQKLSERFEKLNVL 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D+NDA+L +HAGAGGTE+ DWA ML RMY RWAE+  +KTE L++ + +  GI
Sbjct: 61  HLLSGEVDANDAFLTIHAGAGGTEACDWAQMLTRMYLRWAERNDYKTETLDMLEAD-GGI 119

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TL + G  A+G+LKGE G+HRLVRISP+DSN+RRHTSF+S++V+PV+DD+IE+EI  
Sbjct: 120 KSITLKVSGEYAFGFLKGENGIHRLVRISPFDSNARRHTSFTSVYVFPVLDDTIEVEIRP 179

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRA GAGGQHVN TDSAVR+TH+PTG+VV CQ ERSQ  N+A A  +L+A+LY
Sbjct: 180 EDLRVDTYRAGGAGGQHVNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMAILKARLY 239

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E   +++E+      + K +I WG QIRSYV QPY MVKD RT  E  +   V+DGD+D 
Sbjct: 240 EYYREEKEKDNQKFAAEKKDISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDG 299

Query: 346 FMKATL 351
           FM+  L
Sbjct: 300 FMEEYL 305


>gi|71892043|ref|YP_277773.1| peptide chain release factor 2 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796149|gb|AAZ40900.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 348

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 165/340 (48%), Positives = 225/340 (66%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D  ++    ++ + + P +W+N   AK+L ++   L   I+ + ++   L D   L
Sbjct: 2   IFDYDLKIKHFKIISNELKSPGIWKNPKTAKILRQKSSSLKIFINIVDQLYKNLVDLNDL 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL  EE D  +L E  D    ++  +   +   +  G+ D+++ Y+++ +G+GG E+QD
Sbjct: 62  LEL-TEEYDNILLSEIHDQSIDLERTLSQLEISRMFIGKYDNSNCYIDIQSGSGGIEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLRMY RW + + F  + +E   GE  GIKSAT+ + GP AYGWL+ E GVHRLVR
Sbjct: 121 WASMLLRMYLRWIDHKGFMADVIEESTGEVTGIKSATIQVIGPYAYGWLRTESGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS  +RHTSF+S++VYP +DDSI I I   D R D YRASGAGGQHVN T+SAVRI
Sbjct: 181 KSPFDSAKKRHTSFASVFVYPELDDSINIHIRPEDLRCDVYRASGAGGQHVNRTESAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPT +V QCQ +RSQHKNK QA   LRAKLYELELQK+     + ES+K  I WG QI
Sbjct: 241 THIPTNIVTQCQSDRSQHKNKNQAMKQLRAKLYELELQKKNYEKKMRESNKVNITWGNQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSY+L     VKDLRT  EK +   VL+GDLDDF++ ++ 
Sbjct: 301 RSYIL-DNSRVKDLRTGFEKRNVKAVLNGDLDDFIRISIK 339


>gi|296435987|gb|ADH18161.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768]
 gi|296437848|gb|ADH20009.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074]
 gi|297140348|gb|ADH97106.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301]
          Length = 334

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 154/327 (47%), Positives = 206/327 (62%), Gaps = 1/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +      W +V+ A  +      L   +S   E+++++      LE      D  + 
Sbjct: 1   MEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQ 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA
Sbjct: 61  KELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
               ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTS
Sbjct: 121 SSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ 
Sbjct: 181 FASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+    NML A++Y+  LQ+R E  NI   +K E+ WG QIR+YV QPY +VKD
Sbjct: 241 ERSQIQNREACMNMLCARIYQKLLQERLEKQNIDRKNKKEVSWGSQIRNYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +RT  E  +   ++DG+ LD F+KA L
Sbjct: 301 VRTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|255348832|ref|ZP_05380839.1| peptide chain release factor 2 [Chlamydia trachomatis 70]
 gi|255503372|ref|ZP_05381762.1| peptide chain release factor 2 [Chlamydia trachomatis 70s]
 gi|255507050|ref|ZP_05382689.1| peptide chain release factor 2 [Chlamydia trachomatis D(s)2923]
 gi|296435060|gb|ADH17238.1| peptide chain release factor 2 [Chlamydia trachomatis E/150]
 gi|296438780|gb|ADH20933.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023]
          Length = 334

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 156/327 (47%), Positives = 205/327 (62%), Gaps = 1/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +      W +V  A  +      L   +S   E+++++      LE      D  + 
Sbjct: 1   MEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQ 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA
Sbjct: 61  KELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
               ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTS
Sbjct: 121 SSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ 
Sbjct: 181 FVSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD
Sbjct: 241 ERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +RT  E  +   ++DG+ LD F+KA L
Sbjct: 301 VRTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|333000723|gb|EGK20298.1| peptide chain release factor 2 [Shigella flexneri K-272]
 gi|333015221|gb|EGK34563.1| peptide chain release factor 2 [Shigella flexneri K-227]
          Length = 293

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MKQGLEDVSGLLELAVEADDEETFNEAVAELNALEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|261345593|ref|ZP_05973237.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
 gi|282566073|gb|EFB71608.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
          Length = 299

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I +++  + D   LLELA+E DD     ET   L++++ ++E  +F  + SGE DS 
Sbjct: 1   MDTIDQLEQGIEDVEGLLELAIEADDEETFNETDAELEQLQGKLEQLEFRRMFSGEYDSA 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + Y+++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG+KSAT+ I G 
Sbjct: 61  NCYIDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYELE+QK+   
Sbjct: 181 SGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEIQKKNAD 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 KQAMEENKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 297


>gi|302338432|ref|YP_003803638.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
 gi|301635617|gb|ADK81044.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
          Length = 339

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 160/337 (47%), Positives = 214/337 (63%), Gaps = 1/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             Q +  L  ++  P  W++   A+  + E + L   +   K++     D   L ELA E
Sbjct: 1   MAQEIKVLEAESGSPEFWEDRERAEKRLGELKRLHKRLDPWKDLLSSFEDLETLFELAAE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S   +    L  +           +  GE D ++A+L +H+GAGGTE+ DW  MLL
Sbjct: 61  EQDESQEHDIKRQLDEVGDTYRGLNLTEMFQGEFDGSNAFLTIHSGAGGTEACDWTAMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+R+F  + L++ + E  G+KS TL I G   +G+LK E GVHRLVRISP+DS
Sbjct: 121 RMYTRWAERREFSVQTLDLLEAE-GGVKSVTLQINGDFVFGYLKSEIGVHRLVRISPFDS 179

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF+S+++ PV+DD IE++I   + RIDTYRA GAGGQHVN TDSAVRITHI TG
Sbjct: 180 SGRRHTSFASVYISPVIDDDIEVDIKPEELRIDTYRAQGAGGQHVNKTDSAVRITHISTG 239

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ ERSQ+KNKA A  +LR++LYE   +++E+        K EI WG QIRSYV Q
Sbjct: 240 IVVQCQNERSQYKNKAMALKILRSRLYEHYKKEQEKEQEKHAQEKKEISWGNQIRSYVFQ 299

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PY MVKD RT  E  +   V+DG++DDF+ A L   +
Sbjct: 300 PYTMVKDHRTKHEVGNIQAVMDGEIDDFIIAFLNWMQ 336


>gi|255311271|ref|ZP_05353841.1| peptide chain release factor 2 [Chlamydia trachomatis 6276]
 gi|255317573|ref|ZP_05358819.1| peptide chain release factor 2 [Chlamydia trachomatis 6276s]
 gi|297748590|gb|ADI51136.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-EC]
 gi|297749470|gb|ADI52148.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-LC]
          Length = 334

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 156/327 (47%), Positives = 207/327 (63%), Gaps = 1/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +      W +V+ A  +      L   +S   E+++++      LE      D  + 
Sbjct: 1   MEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQ 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA
Sbjct: 61  KELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
               ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTS
Sbjct: 121 SSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ 
Sbjct: 181 FASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD
Sbjct: 241 ERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +RT  E  +   ++DG+ LD F+KA L
Sbjct: 301 VRTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|158317542|ref|YP_001510050.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
 gi|158112947|gb|ABW15144.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
          Length = 386

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 145/338 (42%), Positives = 205/338 (60%), Gaps = 4/338 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L   L  +  + D +   +R   L  +  DP LW +   A+ + R    +   I  ++ 
Sbjct: 31  NLDATLAGIATVLDVEGLRRRAQALEQEAADPDLWSDQDRAQAVTRRLSAVKGDIGRVEG 90

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D +     AL+  D  +L E + +L  +  ++   +  +LLSGE D  DA +++
Sbjct: 91  LRRRLDDLIA----ALDLGDDDLLTEAAADLPALARDISTLEVRTLLSGEYDERDAIVQL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L
Sbjct: 147 SAGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKCPYAYGTL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + V P V+ S  ++I E + RID +R+SG GGQ
Sbjct: 207 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 267 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
              ++ +G QIR+YVL PYQMVKDLRT +E ++ + VL
Sbjct: 327 GPQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTNAVL 364


>gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
 gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
          Length = 358

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 146/345 (42%), Positives = 217/345 (62%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD       +  L   +  P  W     A+  ++E   L + +   ++   +L D  
Sbjct: 9   RTIFDLPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTK 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL   EDD ++ QE  DN+ ++   ++  + + LLSG  D+  A L ++AGAGGT++
Sbjct: 69  AIAELLELEDDATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW E++ +K    E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRL
Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ I + P + +D ++++I + D  I T R+ G GGQ+VN  ++A
Sbjct: 189 VRISPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+ H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG
Sbjct: 249 VRVVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIRGDIVEAAWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIR+YV  PYQMVKDLRTNIE T  + V+DG LD+F++A L   
Sbjct: 309 TQIRNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYLRFD 353


>gi|62259280|gb|AAX77849.1| unknown protein [synthetic construct]
          Length = 360

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 171/327 (52%), Positives = 230/327 (70%), Gaps = 3/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++
Sbjct: 25  LEMELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLM 82

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           QE + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA
Sbjct: 83  QEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWA 142

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +   FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTS
Sbjct: 143 DSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTS 202

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q 
Sbjct: 203 FASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQS 262

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KD
Sbjct: 263 DRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKD 321

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +E T+   VLDGDLD F++A+L 
Sbjct: 322 LRTGVENTNTQAVLDGDLDKFIEASLK 348


>gi|82545486|ref|YP_409433.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|82778343|ref|YP_404692.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|110643039|ref|YP_670769.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|117625122|ref|YP_854110.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|195936508|ref|ZP_03081890.1| hypothetical protein EscherichcoliO157_08602 [Escherichia coli
           O157:H7 str. EC4024]
 gi|209920345|ref|YP_002294429.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217327359|ref|ZP_03443442.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|227888439|ref|ZP_04006244.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|237706466|ref|ZP_04536947.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|254037934|ref|ZP_04871992.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|256019311|ref|ZP_05433176.1| peptide chain release factor 2 [Shigella sp. D9]
 gi|256024599|ref|ZP_05438464.1| peptide chain release factor 2 [Escherichia sp. 4_1_40B]
 gi|261226204|ref|ZP_05940485.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256541|ref|ZP_05949074.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|293406389|ref|ZP_06650315.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|293412249|ref|ZP_06654972.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|293416144|ref|ZP_06658784.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|298382125|ref|ZP_06991722.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|300815658|ref|ZP_07095882.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300820694|ref|ZP_07100845.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300896214|ref|ZP_07114763.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300906560|ref|ZP_07124251.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300921222|ref|ZP_07137595.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300925129|ref|ZP_07141043.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300928174|ref|ZP_07143716.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300936044|ref|ZP_07150992.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300947611|ref|ZP_07161783.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300954270|ref|ZP_07166733.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300980316|ref|ZP_07174970.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300995678|ref|ZP_07181206.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|301027417|ref|ZP_07190754.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|301027812|ref|ZP_07191117.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|301049326|ref|ZP_07196296.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|301303048|ref|ZP_07209175.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|301327291|ref|ZP_07220547.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301643760|ref|ZP_07243798.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|306812207|ref|ZP_07446405.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|307139578|ref|ZP_07498934.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|307310490|ref|ZP_07590138.1| peptide chain release factor 2 [Escherichia coli W]
 gi|309785302|ref|ZP_07679933.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|309793962|ref|ZP_07688387.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|312964850|ref|ZP_07779090.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|312972868|ref|ZP_07787041.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|331643580|ref|ZP_08344711.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331648636|ref|ZP_08349724.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331654388|ref|ZP_08355388.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331659020|ref|ZP_08359962.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331664463|ref|ZP_08365369.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331669625|ref|ZP_08370471.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331678877|ref|ZP_08379551.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331684516|ref|ZP_08385108.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|81242491|gb|ABB63201.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|81246897|gb|ABB67605.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|110344631|gb|ABG70868.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|115514246|gb|ABJ02321.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|209913604|dbj|BAG78678.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217319726|gb|EEC28151.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|226839558|gb|EEH71579.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|226899506|gb|EEH85765.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|227834708|gb|EEJ45174.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|281179896|dbj|BAI56226.1| peptide chain release factor 2 [Escherichia coli SE15]
 gi|281602223|gb|ADA75207.1| Peptide chain release factor 2 [Shigella flexneri 2002017]
 gi|284922839|emb|CBG35928.1| peptide chain release factor 2 (RF-2) [Escherichia coli 042]
 gi|291426395|gb|EFE99427.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|291432333|gb|EFF05315.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|291469020|gb|EFF11511.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|298277265|gb|EFI18781.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|299879074|gb|EFI87285.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|300298925|gb|EFJ55310.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|300304786|gb|EFJ59306.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|300318731|gb|EFJ68515.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300359948|gb|EFJ75818.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300394925|gb|EFJ78463.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|300401599|gb|EFJ85137.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300409324|gb|EFJ92862.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300411828|gb|EFJ95138.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300418731|gb|EFK02042.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300452808|gb|EFK16428.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300458836|gb|EFK22329.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300463814|gb|EFK27307.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300526958|gb|EFK48027.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300531587|gb|EFK52649.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300841712|gb|EFK69472.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|300846154|gb|EFK73914.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301077859|gb|EFK92665.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|305854245|gb|EFM54683.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|306909385|gb|EFN39880.1| peptide chain release factor 2 [Escherichia coli W]
 gi|307554867|gb|ADN47642.1| peptide chain release factor RF-2 [Escherichia coli ABU 83972]
 gi|307625536|gb|ADN69840.1| peptide chain release factor 2 [Escherichia coli UM146]
 gi|308122369|gb|EFO59631.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|308926422|gb|EFP71898.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|310332810|gb|EFQ00024.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|312290406|gb|EFR18286.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|313647930|gb|EFS12376.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|315062195|gb|ADT76522.1| peptide chain release factor RF-2 [Escherichia coli W]
 gi|315256773|gb|EFU36741.1| peptide chain release factor 2 [Escherichia coli MS 85-1]
 gi|315289447|gb|EFU48842.1| peptide chain release factor 2 [Escherichia coli MS 110-3]
 gi|315293877|gb|EFU53229.1| peptide chain release factor 2 [Escherichia coli MS 153-1]
 gi|315295678|gb|EFU54998.1| peptide chain release factor 2 [Escherichia coli MS 16-3]
 gi|315614954|gb|EFU95592.1| peptide chain release factor 2 [Escherichia coli 3431]
 gi|320175922|gb|EFW51000.1| peptide chain release factor 2 [Shigella dysenteriae CDC 74-1112]
 gi|320182207|gb|EFW57110.1| peptide chain release factor 2 [Shigella boydii ATCC 9905]
 gi|320184566|gb|EFW59367.1| peptide chain release factor 2 [Shigella flexneri CDC 796-83]
 gi|320189234|gb|EFW63893.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195009|gb|EFW69638.1| peptide chain release factor 2 [Escherichia coli WV_060327]
 gi|320202550|gb|EFW77120.1| peptide chain release factor 2 [Escherichia coli EC4100B]
 gi|320640534|gb|EFX10073.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645781|gb|EFX14766.1| peptide chain release factor 2 [Escherichia coli O157:H- str.
           493-89]
 gi|320651081|gb|EFX19521.1| peptide chain release factor 2 [Escherichia coli O157:H- str. H
           2687]
 gi|320656577|gb|EFX24473.1| peptide chain release factor 2 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662097|gb|EFX29498.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667172|gb|EFX34135.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154771|gb|EFZ40969.1| peptide chain release factor 2 [Escherichia coli EPECa14]
 gi|323162519|gb|EFZ48369.1| peptide chain release factor 2 [Escherichia coli E128010]
 gi|323167904|gb|EFZ53594.1| peptide chain release factor 2 [Shigella sonnei 53G]
 gi|323173888|gb|EFZ59517.1| peptide chain release factor 2 [Escherichia coli LT-68]
 gi|323180334|gb|EFZ65886.1| peptide chain release factor 2 [Escherichia coli 1180]
 gi|323183444|gb|EFZ68841.1| peptide chain release factor 2 [Escherichia coli 1357]
 gi|323188711|gb|EFZ73996.1| peptide chain release factor 2 [Escherichia coli RN587/1]
 gi|323935878|gb|EGB32177.1| peptide chain release 2 [Escherichia coli E1520]
 gi|323941589|gb|EGB37769.1| peptide chain release [Escherichia coli E482]
 gi|323946624|gb|EGB42647.1| peptide chain release 2 [Escherichia coli H120]
 gi|323951671|gb|EGB47546.1| peptide chain release [Escherichia coli H252]
 gi|323957389|gb|EGB53111.1| peptide chain release [Escherichia coli H263]
 gi|323960813|gb|EGB56434.1| peptide chain release [Escherichia coli H489]
 gi|323966691|gb|EGB62123.1| peptide chain release [Escherichia coli M863]
 gi|323971672|gb|EGB66901.1| peptide chain release [Escherichia coli TA007]
 gi|323978818|gb|EGB73899.1| peptide chain release [Escherichia coli TW10509]
 gi|324005542|gb|EGB74761.1| peptide chain release factor 2 [Escherichia coli MS 57-2]
 gi|324011760|gb|EGB80979.1| peptide chain release factor 2 [Escherichia coli MS 60-1]
 gi|324017287|gb|EGB86506.1| peptide chain release factor 2 [Escherichia coli MS 117-3]
 gi|324115093|gb|EGC09058.1| peptide chain release [Escherichia fergusonii B253]
 gi|324119931|gb|EGC13810.1| peptide chain release [Escherichia coli E1167]
 gi|325498452|gb|EGC96311.1| peptide chain release factor 2 [Escherichia fergusonii ECD227]
 gi|326339026|gb|EGD62841.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1044]
 gi|326343092|gb|EGD66860.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1125]
 gi|327251653|gb|EGE63339.1| peptide chain release factor 2 [Escherichia coli STEC_7v]
 gi|331037051|gb|EGI09275.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331042383|gb|EGI14525.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331047770|gb|EGI19847.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331053602|gb|EGI25631.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331058394|gb|EGI30375.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331063293|gb|EGI35206.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331073707|gb|EGI45028.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331078131|gb|EGI49337.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|332086815|gb|EGI91951.1| peptide chain release factor 2 [Shigella boydii 5216-82]
 gi|332087643|gb|EGI92770.1| peptide chain release factor 2 [Shigella dysenteriae 155-74]
 gi|332090885|gb|EGI95976.1| peptide chain release factor 2 [Shigella boydii 3594-74]
 gi|332344786|gb|AEE58120.1| peptide chain release factor protein PrfB [Escherichia coli UMNK88]
 gi|332752927|gb|EGJ83311.1| peptide chain release factor 2 [Shigella flexneri 4343-70]
 gi|332753726|gb|EGJ84105.1| peptide chain release factor 2 [Shigella flexneri K-671]
 gi|332754583|gb|EGJ84949.1| peptide chain release factor 2 [Shigella flexneri 2747-71]
 gi|332765821|gb|EGJ96034.1| peptide chain release factor 2 [Shigella flexneri 2930-71]
 gi|332999677|gb|EGK19262.1| peptide chain release factor 2 [Shigella flexneri VA-6]
 gi|333000272|gb|EGK19855.1| peptide chain release factor 2 [Shigella flexneri K-218]
 gi|333015042|gb|EGK34385.1| peptide chain release factor 2 [Shigella flexneri K-304]
          Length = 293

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|86147405|ref|ZP_01065718.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218708550|ref|YP_002416171.1| peptide chain release factor 2 [Vibrio splendidus LGP32]
 gi|85834833|gb|EAQ52978.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218321569|emb|CAV17521.1| Peptide chain release factor 2 [Vibrio splendidus LGP32]
          Length = 303

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 162/301 (53%), Positives = 218/301 (72%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           ++  +  I ++   + D   LLELA+EE+D     E    L  ++ ++E  +F  + SG+
Sbjct: 1   MEAVVETIDQLDQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFSGD 60

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D++D Y+++ +G+GGTE+QDW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ 
Sbjct: 61  HDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVR 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID
Sbjct: 121 ISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELE+QK
Sbjct: 181 VYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 241 QNAEKQASEETKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASL 299

Query: 352 A 352
            
Sbjct: 300 K 300


>gi|313816439|gb|EFS54153.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1]
 gi|313827262|gb|EFS64976.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2]
 gi|314917824|gb|EFS81655.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1]
 gi|314919714|gb|EFS83545.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3]
 gi|314930043|gb|EFS93874.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1]
 gi|314956378|gb|EFT00690.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1]
 gi|314957250|gb|EFT01353.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1]
 gi|314967699|gb|EFT11798.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1]
 gi|315098170|gb|EFT70146.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2]
 gi|315101677|gb|EFT73653.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1]
 gi|315109496|gb|EFT81472.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2]
 gi|327452380|gb|EGE99034.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3]
 gi|327452743|gb|EGE99397.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2]
 gi|328753837|gb|EGF67453.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1]
          Length = 370

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 219/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A   DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAA-DDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|88856358|ref|ZP_01131017.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
 gi|88814442|gb|EAR24305.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
          Length = 368

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 214/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D D     ++ L+     P LW +  +A+ +  +  H    ++ I  I
Sbjct: 13  LRSTFADIRQVVDTDRLTSEIARLSEAAGAPDLWDDTDKAQKVTSDLSHRQAELAKINSI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +RL D  I+++LA EE D     +    L  IK  +   + ++LL+GE D   A + + 
Sbjct: 73  SNRLDDLEIMVQLANEESDAQAGADARAELTGIKKTLGDLEVQTLLNGEFDQRPAVITIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY R+AE+  + T  L+    EEAGIKSAT  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRYAEQHSYPTRVLDTSYAEEAGIKSATFEVDAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVR+SP++S  +R TSF+++ V P+++ +  +E+ E+D R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIETTDVVEVPENDIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+++   L  +++E       + 
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQSR-LLLLQREQEAATKKEIAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 312 VITASWGDQMRSYVLAPYQMVKDLRTEFEVNNPSNVFDGDLDGFISAGIKWRK 364


>gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105]
 gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105]
          Length = 304

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 156/301 (51%), Positives = 214/301 (71%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           LD  +  +  +Q  + D+  L+E+A  E D   L+     +   +  +   +F  + S  
Sbjct: 2   LDGVVVTMNTVQSNISDSKELVEMAEAEGDFDTLEAIESEVAEYEKVIADLEFRRMFSNP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  + ++++ AGAGGTE+QDWA++LLR Y R+ E++ FK E +E  DGE AGIKSAT+ 
Sbjct: 62  ADPANCFIDITAGAGGTEAQDWASILLRQYLRYCERKGFKVEVMEQSDGEVAGIKSATIK 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G  A+G+L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VDDS EIEI+ +D R D
Sbjct: 122 VEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSFEIEINPADVRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW ML+AKLYE E++K
Sbjct: 182 TYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWGMLKAKLYEFEMRK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R       E +KT++GWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 242 RMAEQQALEDTKTDVGWGHQIRSYVL-DNSRIKDLRTGVEISNTQRVLDGDLDPFIEASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|94500761|ref|ZP_01307290.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
 gi|94427083|gb|EAT12064.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
          Length = 310

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 167/309 (54%), Positives = 218/309 (70%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + RER  L+  +  I ++   L D   LL++++ EDD   + E    L  ++ ++E  +F
Sbjct: 1   MGRERSALEAVVQTIDDMDTGLSDCDELLQMSVAEDDADSVDEVVSELNELQAKLEKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGEAD N AYL++ AG+GGTE+QDWA M+LRMY RW E + FK E +E   G+ AG
Sbjct: 61  RRMFSGEADENSAYLDIQAGSGGTEAQDWAEMILRMYLRWGEAKGFKVELMEASAGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+  +G  A+GWL+ E GVHRLVR SP+DS+ RRHTSF+S++V P +DD+IEI+I+
Sbjct: 121 IKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASVFVSPEIDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RID YRASGAGGQHVNTT+SAVRITH+PT  V QCQ +RSQHKNK QA   L+AKL
Sbjct: 181 PADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVTQCQNQRSQHKNKDQAMKQLKAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +ELE+QKR       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD
Sbjct: 241 FELEMQKRNADTQALEESKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQQVLDGALD 299

Query: 345 DFMKATLAI 353
            FM+A+L  
Sbjct: 300 PFMEASLKA 308


>gi|312147930|gb|ADQ30589.1| peptide chain release factor 2 [Borrelia burgdorferi JD1]
          Length = 358

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 153/352 (43%), Positives = 222/352 (63%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +Q   +      +    ++     +    + W +   A+ +++ +  L N I   +E+
Sbjct: 8   LLKQAEDIWRKLCKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEEL 67

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +++ D   L E+A  E D + L+        ++ + +     S    E D+N+A+L +H
Sbjct: 68  INKIKDLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIH 124

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK
Sbjct: 125 SGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLK 183

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQH
Sbjct: 184 SEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQH 243

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +
Sbjct: 244 VNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDT 303

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 304 KKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 355


>gi|320103729|ref|YP_004179320.1| peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC
           43644]
 gi|319751011|gb|ADV62771.1| bacterial peptide chain release factor 2 (bRF-2) [Isosphaera
           pallida ATCC 43644]
          Length = 334

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 205/325 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   AK  + E + L+  +   + +  +  D   L+ELA E  D S+  E  
Sbjct: 1   MNAPDFWNHQDRAKATIAEIKTLNAVLKPYEALVKQAEDLQALVELADEAGDDSLDDEID 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              Q+ +   +  + +S+LSG  D  +A+LE+H G GGTE+ DW+ MLLRMY  WAE + 
Sbjct: 61  QATQKAREAFDKFELQSMLSGMNDHCNAFLEIHPGEGGTEACDWSEMLLRMYMMWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +   DG  AGI+SA L I G  A+G+LKGE GVHRLVRISP+D+  RR TSF+S+
Sbjct: 121 YKVELISREDGGVAGIQSAQLKISGDYAFGYLKGEAGVHRLVRISPFDAAGRRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI + D + D +R  G GGQH N T+S VR TH+PTGVV + + ERSQ
Sbjct: 181 DVTPEIDDTIEIEIRDCDLKRDVFRCGGPGGQHQNKTESGVRYTHLPTGVVAESRSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N   A  +L+AKL  LE +KRE  +      K++IG+G QIRSYVLQPY +VKDLRT 
Sbjct: 241 FQNDDLALKLLKAKLIRLEEEKREAESIKAYDDKSKIGFGSQIRSYVLQPYTLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +P  VLDGDLD F+ A L +K
Sbjct: 301 YETGNPRAVLDGDLDGFINAYLRMK 325


>gi|228472944|ref|ZP_04057701.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275526|gb|EEK14303.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 366

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 235/352 (66%), Gaps = 2/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS+++  L      D     ++    KT  P  W +  +A++L+++ Q     ++  ++
Sbjct: 9   ELSQRVENLEKYLQIDKKKIEIANEEEKTLAPDFWDSPKQAQLLVQKLQSQKKWVTDYEK 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + + +  I+L+   E  +    +E  D   +  L +E  +F ++LS E D+  A L++
Sbjct: 69  SAEMVEELQIMLDFYKE--NAISAEEVEDFYGQTLLHIENLEFRNMLSDEGDALSAVLQI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA+ML+RMY  WA ++ F  + L   +G+ AG+K+ TL I G  A+G+L
Sbjct: 127 TAGAGGTESCDWASMLMRMYMMWANRQGFSVKELNFQEGDVAGVKTVTLEIDGEFAFGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ +D   +T R+SGAGGQ
Sbjct: 187 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFETMRSSGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LYE+EL+KR+   +  E+
Sbjct: 247 NVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEA 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K +I WG QIR+YV+ PY++VKD+R+  E T+   V++G+LDDF+KA L +
Sbjct: 307 NKMKIEWGSQIRNYVMHPYKLVKDVRSGYETTNVDAVMNGELDDFLKAYLML 358


>gi|241667458|ref|ZP_04755036.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876005|ref|ZP_05248715.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842026|gb|EET20440.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 325

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 170/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|222034586|emb|CAP77328.1| Peptide chain release factor 2 [Escherichia coli LF82]
          Length = 293

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MKQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|188586825|ref|YP_001918370.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351512|gb|ACB85782.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 344

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 166/337 (49%), Positives = 226/337 (67%), Gaps = 1/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  L  +  +P  W +   AK + +ERQ L   +  IKE+ +   +  +++EL+ E
Sbjct: 1   MEKRLKELEKQMTEPGFWDDQDRAKKVTQERQELKEHLDEIKELDELKDEVSVMIELSEE 60

Query: 79  ED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           ++ D + ++E    L + + ++   + +++L    D N+A + +HAGAGGTESQDW  ML
Sbjct: 61  DETDGTNMKEIKQALFQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAGGTESQDWVEML 120

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RW E R F  E L+   G+EAG+KS T+++KG  A+G+LK E GVHRLVR+SP+D
Sbjct: 121 HRMYIRWMEHRGFNYETLDFLPGDEAGVKSVTMMVKGKYAFGYLKSEAGVHRLVRVSPFD 180

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S+ RRHTSF+S+ V P +DD IEI+I + D +IDTYRASGAGGQHVNTTDSAVRITH PT
Sbjct: 181 SSGRRHTSFASMDVVPEIDDDIEIDIKDDDLKIDTYRASGAGGQHVNTTDSAVRITHHPT 240

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQHKN+  A  +L+AKL  +E +KR +        K EI WG QIRSYV 
Sbjct: 241 GIVVQCQNERSQHKNREVAMKILKAKLAAIEEEKRRQEQEAMRGDKKEIAWGSQIRSYVF 300

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PY MVKD RTN+E+ +   VLDG LD F++  L  +
Sbjct: 301 HPYTMVKDHRTNLEEGNADAVLDGKLDHFIQEYLKQR 337


>gi|290511305|ref|ZP_06550674.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
 gi|289776298|gb|EFD84297.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
          Length = 299

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 211/298 (70%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D   LLELA+E +D     E    L  ++ ++   +F  + SGE DS 
Sbjct: 1   MDTLDQMSQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSA 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G 
Sbjct: 61  DCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+   
Sbjct: 181 SGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 KQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 297


>gi|146328937|ref|YP_001209831.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
 gi|146232407|gb|ABQ13385.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
          Length = 305

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 163/301 (54%), Positives = 213/301 (70%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           +   +  +  I   L D   L+ LA +E+D  ++Q    +++R++  VE  +F  + SGE
Sbjct: 1   MQTVVLGLDNIHQGLNDARELMALAEDENDEELVQSARLDIERLQKSVEILEFRRMFSGE 60

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+A+L++ +G+GGTE+QDWA ML RMY RW E + F TE LE   G+ AGIKSAT+ 
Sbjct: 61  LDANNAFLDIQSGSGGTEAQDWAEMLERMYLRWGEAKGFTTELLEETPGDVAGIKSATIR 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
             G  AYGWLK E GVHRLVR SP+D+N+RRHTSF++++V P +DD+IEI+I+ +D RID
Sbjct: 121 FTGEYAYGWLKTEIGVHRLVRKSPFDANNRRHTSFAAVFVSPEIDDAIEIDINPADLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITH+PTG VVQ Q  RSQH+NK      LRAKLY+LEL K
Sbjct: 181 VYRASGAGGQHVNRTESAVRITHLPTGTVVQSQDSRSQHQNKQTCMRHLRAKLYQLELHK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R E A   E SK++IGWG QIRSYVL   Q +KDLRT  E ++   VLDGDLD F++ +L
Sbjct: 241 RSESAQALEDSKSDIGWGNQIRSYVL-DQQRIKDLRTGYETSNTQAVLDGDLDPFIQESL 299

Query: 352 A 352
            
Sbjct: 300 K 300


>gi|88803344|ref|ZP_01118870.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
 gi|88780910|gb|EAR12089.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
          Length = 365

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 145/350 (41%), Positives = 223/350 (63%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++  L    + D  +  ++    KT +P  W +  EA++ ++E +     ++  +  
Sbjct: 10  IADRIEKLKSYLEIDKKLIEIANEEEKTTNPGFWDHPKEAEVAIKELRFKKKWVTDYQHA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D ++L E   E D      E  +  +++   +E  +F ++LS E DS  A +++ 
Sbjct: 70  ITLNDDVIVLYEFYKEGDVAET--EMDEQFEKVSSFLEDIEFRNMLSEEGDSLAATIQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  ML RMY+ WAEK+ FK + L    G+ AGIK+ T+ I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWVEMLSRMYSMWAEKQGFKLKTLNYQAGDVAGIKTITIEIEGDFAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN +RHT+F S++V+PV DDSIEI ++ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNGKRHTTFGSVYVFPVADDSIEIAVNPADIEIVTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+ +QC   RSQH N+A A  ML+++LYE+EL+K++      E+ 
Sbjct: 248 VNKVETKVQLTHKPTGIQIQCSNSRSQHDNRATAMKMLKSQLYEIELKKQQATRADIEAG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +  WG QIR+YV+ PY++VKD+RT  E  +   V+DG+++ F+K+ L 
Sbjct: 308 KLKNEWGSQIRNYVMHPYKLVKDVRTAYETGNVDAVMDGNINPFLKSYLM 357


>gi|291299376|ref|YP_003510654.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568596|gb|ADD41561.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
          Length = 376

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 220/354 (62%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D      S L      P LW +   A+ +     ++ + ++ I+++
Sbjct: 13  LNSTLESVTAVLDLDALSVEKSELEAAAASPDLWDDTTHAQKVTSRLSYVQSELNRIEDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L +LA  E+D + ++E S  L  +   +E  +  +LLSGE DS +A + + 
Sbjct: 73  RRRLDDAEVLWDLAQSEEDPAAVEEASKELAALSKAIEELEVRTLLSGEYDSREALISIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG +S D+A  L+RMY RWAE+  + TE  ++   EEAGIKSAT  +K P AYG L 
Sbjct: 133 SGAGGADSADFAEQLMRMYLRWAERHGYPTEVYDVSYAEEAGIKSATFAVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HR+VRIS YD+  RR T+F+++ V PVV+ + +I+I + + R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRVVRISKYDNQGRRQTAFAAVEVVPVVEQTDDIDIPDDEIRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+ TG+VV CQ ERSQ +N+A A  +L+AKL  L  ++ EE A I E  
Sbjct: 253 VNTTDSAVRITHLETGIVVSCQNERSQLQNRATAMAVLKAKL--LARRREEENAKIDELR 310

Query: 303 -KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYV  PYQMVKDLRT  E  +   V DG++D  ++A +  +K
Sbjct: 311 GSVQASWGEQMRSYVQHPYQMVKDLRTGWETANVMAVYDGEIDGLIEAGIRWRK 364


>gi|323359619|ref|YP_004226015.1| protein chain release factor B [Microbacterium testaceum StLB037]
 gi|323275990|dbj|BAJ76135.1| protein chain release factor B [Microbacterium testaceum StLB037]
          Length = 370

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 144/353 (40%), Positives = 206/353 (58%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D D     +  L+ +   P LW +V  A+ +     H    +  I EI
Sbjct: 13  LRSTFADIQAVVDVDALKADIDRLSEEAGAPDLWDDVDNAQKVTSRLSHRQAELKRITEI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L+ELA+E DD     E    L  +K  +   + ++LL GE DS  A + + 
Sbjct: 73  EQRLDDLEVLVELAIEMDDEDSADEARRELASLKDVIGQLEVQTLLDGEYDSRSAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+ K+  + ++    E AGIKSAT  +  P AYG L 
Sbjct: 133 SGAGGDDATDFAEMLLRMYLRWAERHKYPVKVMDTSYAEGAGIKSATFEVDVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRL RISP+    +R TSF+++ V PV+++++E+E+ E D R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLARISPFGGADKRQTSFAAVEVIPVMEEAVEVEVPEGDIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV  Q E+SQ +N+A A  +L+ +L  L+  + E       + 
Sbjct: 253 VNTTDSAVRITHIPTGLVVSMQNEKSQIQNRAAAMRVLQTRLLLLKR-EEEAAKKKELAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSY L   Q+VKDLRT  E  +P+ V DGDLD  + A +  +K
Sbjct: 312 TITASWGDQMRSYFLYGQQLVKDLRTGYEVGNPAVVFDGDLDGLIAAGIRWRK 364


>gi|13959455|sp|P57511|RF2_BUCAI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R++  L    D++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI
Sbjct: 14  LNRRVQDLKRYLDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ 
Sbjct: 74  EENIKEVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW +
Sbjct: 134 SGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQH
Sbjct: 194 TETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +
Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++I WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 314 KSDITWGNQIRSYIL-DNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 363


>gi|296436914|gb|ADH19084.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222]
          Length = 334

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 207/327 (63%), Gaps = 1/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +      W +V+ A  +      L   +S   E+++++      LE      D  + 
Sbjct: 1   MEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQ 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA
Sbjct: 61  KELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWA 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
               ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTS
Sbjct: 121 SSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V+P +D+ IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ 
Sbjct: 181 FASVEVFPEIDNKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQN 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD
Sbjct: 241 ERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +RT  E  +   ++DG+ LD F+KA L
Sbjct: 301 VRTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|90424348|ref|YP_532718.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB18]
 gi|90106362|gb|ABD88399.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB18]
          Length = 322

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 250/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++  I +++  L DN+ ++EL   E+D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLGGIGKVERELTDNVDMIELGEAENDEGVVAEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVD++I+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVVDNTIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKNKAQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMGATLAQR 309


>gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A]
 gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium
           UCYN-A]
          Length = 344

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 144/336 (42%), Positives = 216/336 (64%), Gaps = 1/336 (0%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
                 +  L   T  P+ W N   A+ + +E  +  + +    +  ++L D  I+++L 
Sbjct: 2   PALQASIKDLENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLL 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + ++D S+L+E  +N+ ++K  ++    + LLSG  D   A L ++ G GGT++QDW+ M
Sbjct: 62  ILDNDKSLLEEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQDWSEM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY RW E + +K   +EI +G+EAGIKSATL  +G  A+G+LKGE+G HRLVRISP+
Sbjct: 122 LLRMYRRWGESQGYKVNLVEISEGDEAGIKSATLEFEGCYAFGYLKGEKGTHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++N +R TSF+ I V P ++ + I++EI + D  I T R+ G GGQ+VN  ++AVRI H+
Sbjct: 182 NANGKRQTSFTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHL 241

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG QIRSY
Sbjct: 242 PTGISVRCTQERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEIRGDIVEAAWGNQIRSY 301

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PYQMVKDLRTN+E T+ +DV+DGDL  F++A L
Sbjct: 302 VFHPYQMVKDLRTNVETTNINDVMDGDLGLFIEAYL 337


>gi|88192320|pdb|2B9M|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400
          Length = 365

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 5/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + 
Sbjct: 5   RLAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   LLEL +EE      +     L+    +++    ++LL+      +A L +
Sbjct: 65  LES---DLQGLLEL-MEELPAEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE       
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 301 EVRPIEWGSQIRSYVL-DKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352


>gi|157148427|ref|YP_001455746.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
 gi|157085632|gb|ABV15310.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
          Length = 293

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 207/292 (70%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MTQGLEDVSGLLELAVEADDEETFNEAVAELDTLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
 gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
          Length = 362

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 182/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  +    + L +E   L+  I      +    D     E+
Sbjct: 9   LEALSERYEEVQHLLGDPSVISDQDRFRSLSKEYSQLEEVIKCFSAYKQAESDLEAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K ++E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDPEMREMAQEEVKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + ++ E +  + GE  G K     + G  AYG +K E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAESKGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P + ++   EI+ +D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A+L + E +KR  E A+   +         
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQASTRRNLLGSGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++GDLD  ++  +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTVYRLDEVMEGDLDSLIQPII 347


>gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9313]
 gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT
           9313]
          Length = 375

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 148/351 (42%), Positives = 208/351 (59%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L       D      R   L      P  W +   A+  MR+   +   ++ I  
Sbjct: 13  ELTDRLGQAQDCLDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRQLDEVKAQLTQITL 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D    LEL   E D  +L E    L++++  ++  + E LLSGE D   A L +
Sbjct: 73  WRSAVNDAQATLELYDLEPDDEMLSEAQSGLKQLRQGLDRWELERLLSGEYDKEGAVLSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRWAE         E+ +GEEAGIKSAT+ I+G  AYG+L
Sbjct: 133 NAGAGGTDAQDWAQMLLRMYTRWAEDHDMTVTVDELSEGEEAGIKSATVEIEGRYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ + + P +D  +E++I E D  + T R+ GAGGQ
Sbjct: 193 RNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPEKDLEVTTSRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R         
Sbjct: 253 NVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLMVIAQEQRAAEIADIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E  WG QIR+YV  PYQMVKDLRT  E T    V++GDLD F++  L 
Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGDLDRFIQTLLR 363


>gi|15617035|ref|NP_240248.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681787|ref|YP_002468173.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471489|ref|ZP_05635488.1| peptide chain release factor 2 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|25299669|pir||F84980 peptide chain release factor 2 [imported] - Buchnera sp.  (strain
           APS)
 gi|10039100|dbj|BAB13134.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624630|gb|ACL30785.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311087327|gb|ADP67407.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + 
Sbjct: 3   KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GG
Sbjct: 63  EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           T++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+
Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+
Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I 
Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 303 WGNQIRSYIL-DNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|149910167|ref|ZP_01898813.1| putative peptide chain release factor 2 [Moritella sp. PE36]
 gi|149806753|gb|EDM66717.1| putative peptide chain release factor 2 [Moritella sp. PE36]
          Length = 301

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 160/298 (53%), Positives = 213/298 (71%), Gaps = 1/298 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  I ++     D   L+ELA+E +D     E    +  ++ ++   +F  + SG+ D+
Sbjct: 2   IVKTIDDLGTGCDDVEGLVELAVEAEDEETFAEAQHEIIGLEAQLAKLEFRRMFSGKHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           ND YL++ +G+GGTE+QDWANMLLRM+ RW E  KFK E +E+  G+ AGIK AT+ + G
Sbjct: 62  NDCYLDIQSGSGGTEAQDWANMLLRMFLRWGEAHKFKVELIEVSSGDVAGIKGATIRLGG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYGWL+ E GVHRLVR SP+DS+ RRHTSF+SI+VYP +DDSIEI+++ SD RID YR
Sbjct: 122 EYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASIFVYPEIDDSIEIDLNPSDLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK  A   +RAKL++ E+QK+  
Sbjct: 182 ASGAGGQHVNTTESAVRITHLPTNLVVQCQNDRSQHKNKDAAMKQMRAKLFDHEMQKQNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              I E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 242 EKQIAEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLK 298


>gi|311087834|gb|ADP67913.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + 
Sbjct: 3   KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GG
Sbjct: 63  EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDYYDCYIDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           T++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+
Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+
Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I 
Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 303 WGNQIRSYIL-DNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|297171212|gb|ADI22220.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_34B24]
 gi|297171327|gb|ADI22332.1| protein chain release factor B [uncultured actinobacterium
           HF0500_01C15]
          Length = 325

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 167/323 (51%), Positives = 222/323 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E   L   +   K +  +  +   L EL  EE+D  +  E  
Sbjct: 1   MAEPGFWDDQESARAVIDESNRLKGWVEPWKALAGKGSELEALAELLEEEEDAELAGEFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  VE  + +++L G+ D  +A + +H GAGG ESQDWA ML+RMYTRWAE+R 
Sbjct: 61  EELAVLQKSVEALELKTMLRGDEDHREAIVTLHPGAGGLESQDWAQMLMRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+   L++   +EAGIKSATL IKG + YG+LK E+GVHRLVRISP+D+ SRRHTSF+S+
Sbjct: 121 FQVNVLDLQPAQEAGIKSATLEIKGESVYGYLKAERGVHRLVRISPFDAQSRRHTSFTSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP+V+D IE+EI+E+D RIDTYRASGAGGQHVN TDSAVRITH PT +VV CQQERSQ
Sbjct: 181 FVYPLVEDDIEVEINEADLRIDTYRASGAGGQHVNKTDSAVRITHEPTNIVVSCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN++ A  MLRA LY+  L+++E+     E SK +IG+G QIRSYV QPY MV D RT 
Sbjct: 241 HKNRSTAMKMLRAALYQRALEEKEKEKAAIEESKADIGFGSQIRSYVFQPYTMVNDHRTE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            +      V+DGDLD  ++A L 
Sbjct: 301 TKIGDVHGVMDGDLDPLIEAYLK 323


>gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
 gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
          Length = 313

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 146/308 (47%), Positives = 204/308 (66%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   ++   +++ R+     L+ELA  E D S+  + +  +Q I+ EV  ++ E
Sbjct: 1   MQRLTRLKEEVTAWNDLERRIASAAELIELAELEGDESLTADLAAEVQAIQREVAQRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D  DA+L V AG GGT++QDWA MLLRMYTRWAE+R +    +++ +GEEAGI
Sbjct: 61  ILLSGPYDDRDAFLSVQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I+GP AYG+ + E GVHRL+R+SP+++   R TSF+ + V P VDD+ E+EI  
Sbjct: 121 KSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L 
Sbjct: 181 EDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVLRARLL 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ++ E          E  +G Q+R+Y L P  +VKD RT+ E ++   VLDG++D 
Sbjct: 241 ERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDP 300

Query: 346 FMKATLAI 353
           F++A L  
Sbjct: 301 FIEAFLRA 308


>gi|62184808|ref|YP_219593.1| peptide chain release factor 2 [Chlamydophila abortus S26/3]
 gi|81313013|sp|Q5L6U9|RF2_CHLAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|62147875|emb|CAH63621.1| putative peptide chain release factor 2 [Chlamydophila abortus
           S26/3]
          Length = 368

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 222/358 (62%), Gaps = 8/358 (2%)

Query: 3   LSRQLNCL-------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
           L ++L  L       G   D +   Q LS L  +T     WQ+V  A  +      L   
Sbjct: 5   LDKRLEGLLTGLALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIVSLKRQ 64

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           I+  +E + R+ +    L       D  + ++        +  +   + + LLSGE D N
Sbjct: 65  IAHYEEFKVRVENLAFFLNDGDVSADPELREDLEKEFTICEHILSEWETQRLLSGEVDKN 124

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G 
Sbjct: 125 PCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGD 184

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+
Sbjct: 185 YAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRS 244

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E 
Sbjct: 245 SGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEK 304

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             +   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 305 QLLDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362


>gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
 gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
          Length = 330

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 140/322 (43%), Positives = 215/322 (66%), Gaps = 1/322 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N+  A+  ++E     +++   +    +L D   ++EL   E D ++L+E +DNL
Sbjct: 5   PTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRTLLEEATDNL 64

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++ +++  + + LL+G  D+  A L ++AGAGGT++QDW  MLLRMY+RWAEK+ +K 
Sbjct: 65  THLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              EI +G+EAGIKS T+ I G  AYG+LKGE+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184

Query: 213 PVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P++ DD++ +EI + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C QERSQ +
Sbjct: 185 PILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK +A  +L+AKL  +  +++ +          E  WG QIR+YV  PYQ+VKDLR+N+E
Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVE 304

Query: 332 KTSPSDVLDGDLDDFMKATLAI 353
            T  + V++GDLD F++A L +
Sbjct: 305 TTDVTRVMNGDLDSFIEAYLRL 326


>gi|84393962|ref|ZP_00992702.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
 gi|84375406|gb|EAP92313.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
          Length = 303

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 161/301 (53%), Positives = 218/301 (72%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           ++  +  I ++   + D   LLELA+EE+D     E    L  ++ ++E  +F  + +G+
Sbjct: 1   MEAVVETIDQLDQGVEDVEGLLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFAGD 60

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D++D Y+++ +G+GGTE+QDW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ 
Sbjct: 61  HDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVR 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID
Sbjct: 121 ISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELE+QK
Sbjct: 181 VYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L
Sbjct: 241 QNAEKQASEETKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASL 299

Query: 352 A 352
            
Sbjct: 300 K 300


>gi|30692908|ref|NP_851096.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 456

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 216/354 (61%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +    +     Q ++ L +K  D   W +  +A+  +     L + +  + E +
Sbjct: 92  SARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFK 151

Query: 64  DRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + D   +++L  E D  D S+L+E    ++ +   ++  +   LLSG  D   A + +
Sbjct: 152 TMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYI 211

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++
Sbjct: 212 TAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYI 271

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P+  ++++ IEI E D  I   RA G GG
Sbjct: 272 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGG 331

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A   L+AKL  +  ++R        
Sbjct: 332 QNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIR 391

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +  + V+DGDLD F+KA L  K
Sbjct: 392 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 445


>gi|293390164|ref|ZP_06634498.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950698|gb|EFE00817.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 300

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 167/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ IK ++  L D   LLELA+E  D     E    L  ++ ++E  +F  + SGE D+ 
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAIAELNALEQQLEKLEFRRMFSGEHDAC 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G 
Sbjct: 62  DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 298


>gi|307546434|ref|YP_003898913.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
 gi|307218458|emb|CBV43728.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
          Length = 301

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 215/298 (72%), Gaps = 1/298 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  I  ++  L DN  LLELA  E+D   + E S  L+ ++ ++E  +F  + +GE D 
Sbjct: 2   VVDTIDTLERGLNDNRDLLELAEMEEDADTVDEVSRELESLRADLEKLEFRRMFAGEMDP 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+AYL++ AG+GGTE+QDWANMLLRMY RWAE   FK + +E+  GE AGIKSAT+ I+G
Sbjct: 62  NNAYLDIQAGSGGTEAQDWANMLLRMYLRWAEHHGFKADLIELSAGEVAGIKSATVHIQG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E GVHRLVR SP+DS  RRHTSF+S+++ P VDDS E+EI+ SD R+DTYR
Sbjct: 122 EYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFEVEINPSDLRVDTYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVNTTDSAVRITH PTG+VV CQ +RSQH N+  A   LRAKL+E E+ KR  
Sbjct: 182 SSGAGGQHVNTTDSAVRITHEPTGIVVACQSQRSQHANRDFAMKQLRAKLWEHEMDKRNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E SK +IGWG QIRSYVL   Q +KDLRT ++ +S   VLDGDLD F++A+L 
Sbjct: 242 AKQAAEDSKADIGWGSQIRSYVLDD-QRIKDLRTGVQSSSCEKVLDGDLDQFIEASLK 298


>gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8]
          Length = 300

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 156/297 (52%), Positives = 217/297 (73%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  +  +   L D+  L ELA  +DD + L+    +    + ++E  +F  + S  AD  
Sbjct: 2   VETLTALGSGLADSNELFELAASDDDDATLESIEQDADAFQEKLEALEFRRMFSNPADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + +L++ AGAGGTE+QDWA+MLLR Y ++AE++ FK E LE  DG+ AG+KSAT+ I+G 
Sbjct: 62  NCFLDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESDGDVAGLKSATIKIEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRA
Sbjct: 122 YAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R   
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 QQKLEDSKTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 297


>gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
 gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
          Length = 453

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 216/354 (61%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +      +   Q ++ L +K  D   W +  +A+  +     L + +  + E +
Sbjct: 89  SARVEEIRASAGLEQLEQEIANLESKATDTSFWDDRTKAQETLSALNDLKDRMRLLSEFK 148

Query: 64  DRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + D   +++L  E D  D S+L+E    ++ +   ++  +   LLSG  D   A + +
Sbjct: 149 TMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDRFELTQLLSGPYDKEGAVVYI 208

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++
Sbjct: 209 TAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYI 268

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P+  ++++ IEI E D  I   RA G GG
Sbjct: 269 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGG 328

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A   L+AKL  +  ++R        
Sbjct: 329 QNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLLVIAEEQRATEIKEIR 388

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +  + V+DGDLD F+KA L  K
Sbjct: 389 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 442


>gi|88706910|ref|ZP_01104609.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
 gi|88698832|gb|EAQ95952.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
          Length = 299

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 161/297 (54%), Positives = 215/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +S I  +     D L L+E+A EEDD + + E    +Q +   +E  +F  + +GE D N
Sbjct: 1   MSSIDALDTGASDTLDLIEMAAEEDDEAAVAELEQEIQGLLKVLEKLEFRRMFNGEMDPN 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A+L++ +G+GGTE+QDWA +LLRMY RW E + F TE +E   G+ AGIKSAT+   G 
Sbjct: 61  NAFLDIQSGSGGTEAQDWAEILLRMYLRWGEAKGFSTELIEASGGDVAGIKSATIKFTGE 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRA
Sbjct: 121 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVR+TH P+G+VVQCQ ERSQH+N+  A  +LR KLYE+E+ KR E 
Sbjct: 181 SGAGGQHVNKTDSAVRLTHNPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEILKRNEE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             I E +K +IGWG QIRSYVL     +KDLRTN+E ++   VLDGD+D F++A+L 
Sbjct: 241 KQIMEDNKADIGWGSQIRSYVL-DASRIKDLRTNVETSNTQAVLDGDIDQFIEASLK 296


>gi|261342293|ref|ZP_05970151.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315634|gb|EFC54572.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
          Length = 293

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 167/292 (57%), Positives = 207/292 (70%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MAQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AG+KS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLTRMYLRWAEARGFKTEIIEESEGEVAGLKSVTIKIIGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVNDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|331674375|ref|ZP_08375135.1| peptide chain release factor 2 [Escherichia coli TA280]
 gi|331068469|gb|EGI39864.1| peptide chain release factor 2 [Escherichia coli TA280]
          Length = 291

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 169/290 (58%), Positives = 206/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 1   QGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQA 60

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ 
Sbjct: 61  GSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRT 120

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV
Sbjct: 121 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 180

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 181 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 240

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 SDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 289


>gi|328752610|gb|EGF66226.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2]
          Length = 370

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 219/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWGDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A   DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAA-DDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|203284000|ref|YP_002221740.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
 gi|201083443|gb|ACH93034.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
          Length = 347

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 147/348 (42%), Positives = 220/348 (63%), Gaps = 4/348 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG FD D    +L     +  + + W +   A+ +++ +  L   I   + +  +L
Sbjct: 1   MKMSGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWENLICQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L ++A  EDD ++L+    ++ +++ + ++    S    + D N A+L +H+GAG
Sbjct: 61  KDLRELCKIAESEDDKALLE---RDVNKLREQYKHILTLSYFKEDIDINSAFLTIHSGAG 117

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW NML R Y R++E+R +K E +++ + E  GIKS T+ IKG  AYG+LK E G
Sbjct: 118 GTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVG 176

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN T
Sbjct: 177 IHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVNKT 236

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K +I
Sbjct: 237 SSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDI 296

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 297 SWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344


>gi|313764090|gb|EFS35454.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1]
 gi|314914951|gb|EFS78782.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4]
          Length = 370

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 219/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQGAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A   DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAA-DDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|299472049|emb|CBN80132.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 466

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 152/352 (43%), Positives = 219/352 (62%), Gaps = 6/352 (1%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L    D      RL+ L+    DP L+ +  +A  +++ER  +++ +  +K +   L  
Sbjct: 106 LLSSRLDIPALEARLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSELQS 165

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAG 126
              + E+A  E++  +L E  + +  ++ + E  + E+LLS  GE  +++ YLE+ AGAG
Sbjct: 166 WREMYEMASLEEEGDLLTECIEKVGALRKQAERARAETLLSLGGELSASNCYLELQAGAG 225

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DW +ML +MYTRWAE + F  + L    G+EAG++S  + ++G +AYGWL+ E G
Sbjct: 226 GTESHDWTSMLYKMYTRWAETKAFTLQPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAG 285

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVD----DSIEIEISESDCRIDTYRASGAGGQH 242
           VHRLVR SPYD N RRHTSFS + V+P       D+ ++EI   D ++DT RA GAGGQH
Sbjct: 286 VHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQH 345

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+V   Q +RSQHKN+  A   LRAK+++ + ++R    N   + 
Sbjct: 346 VNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQRKEEERHAKRNEYAAG 405

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  +G QIRSYVL PYQMVKD RT  ++   S VLDG LD F+ A L  +
Sbjct: 406 LGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAE 457


>gi|329296879|ref|ZP_08254215.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 293

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 170/292 (58%), Positives = 213/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  L D   LLELA+E DD     E    L  + +++   +F  + SGE DS D Y+++
Sbjct: 1   MQQGLEDVQGLLELAVEADDEETFNEAVVELDALDVKLGELEFRRMFSGEYDSADCYMDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG KSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGTKSATIKIIGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS+++YP VDDSI+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDSIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E 
Sbjct: 181 HVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQAAEE 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|295105719|emb|CBL03262.1| peptide chain release factor 2 [Gordonibacter pamelaeae 7-10-1-b]
          Length = 363

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 212/352 (60%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++    G    D+    L+ L+ +   P  W +   A+ + ++  +L   I    E 
Sbjct: 11  MAARVTDAHGFLHIDDKTAELAKLDEEIAAPGFWDDAAHAQGVSKQASNLRETIREYDEA 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    LELA   +D +   E  D L R+   ++  +  S  S   D  DA L V+
Sbjct: 71  AALLEDARAALELAG--EDEAFAAEADDALARLSDLLDALEITSWFSERFDGGDAILTVN 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G+GG E+QDW +ML RMY R+AEK+ +K   L++  GE  G+  AT+ I+G NA+G LK
Sbjct: 129 PGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTILDVVPGEGIGLDKATIQIEGRNAFGMLK 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP D   RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ 
Sbjct: 189 SENGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQC 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPT +VV CQ E+SQ +NK  A+ +L+AKLYE E QKR +        
Sbjct: 249 VNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRAQELAELRGD 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  +G QIR+YVL PYQMVKD+R+ +E  +   VLDGDL++F+      +
Sbjct: 309 RMDNTFGSQIRNYVLYPYQMVKDVRSGVETGNVDAVLDGDLEEFVIGYHKWR 360


>gi|261212226|ref|ZP_05926512.1| peptide chain release factor 2 [Vibrio sp. RC341]
 gi|260838834|gb|EEX65485.1| peptide chain release factor 2 [Vibrio sp. RC341]
          Length = 300

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 166/297 (55%), Positives = 217/297 (73%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I ++   + D   LLELA+E +D     E    L  +++++E  +F  + SG+ DS+
Sbjct: 2   VDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSS 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G 
Sbjct: 62  DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRA
Sbjct: 122 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+   
Sbjct: 182 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 242 KQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 297


>gi|30692913|ref|NP_851097.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana]
 gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 455

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 216/354 (61%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +    +     Q ++ L +K  D   W +  +A+  +     L + +  + E +
Sbjct: 91  SARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFK 150

Query: 64  DRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + D   +++L  E D  D S+L+E    ++ +   ++  +   LLSG  D   A + +
Sbjct: 151 TMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYI 210

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++
Sbjct: 211 TAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYI 270

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P+  ++++ IEI E D  I   RA G GG
Sbjct: 271 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGG 330

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A   L+AKL  +  ++R        
Sbjct: 331 QNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIR 390

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +  + V+DGDLD F+KA L  K
Sbjct: 391 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 444


>gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
          Length = 453

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 139/354 (39%), Positives = 214/354 (60%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +          Q L+ L +K  D   W +  +A+ ++     + + I  + + +
Sbjct: 91  SERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMAMTDVKDKIKMLTDFK 150

Query: 64  DRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ +   +++L  E D  D  +L+E +  ++ +   ++  +   LLSG  D   A + +
Sbjct: 151 TQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSELLSGPYDKEGAVISI 210

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ I+G  AYG++
Sbjct: 211 SAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYI 270

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P++ D S+ +E+ E D  I   RA G GG
Sbjct: 271 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGG 330

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R        
Sbjct: 331 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 390

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +    V+DG+L+ F+KA L  K
Sbjct: 391 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFIKAYLKYK 444


>gi|194246500|ref|YP_002004139.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
 gi|193806857|emb|CAP18286.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
          Length = 363

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 157/351 (44%), Positives = 227/351 (64%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L + L+ L    + +   +RL  LN      + W+N  +AK + +E + L+  I  +++
Sbjct: 12  NLKKILDDLEIGMNLNKQKKRLKDLNHLINLSNFWENFEKAKKINQEFKSLNEKIYKMQK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             +   D L LL++  E  D  +       L  +K  ++  +   LL+   D  +A L +
Sbjct: 72  FHEEYRDLLSLLKITKENTDDFLF--LEQTLLSLKKNIQDFEINILLNQTYDKKNAILIL 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGG ESQDW  MLLRMY ++A+K+ FK   L+   G+ AG+KS +LLIKG  AYG+L
Sbjct: 130 HPGAGGIESQDWCEMLLRMYQKYAQKKNFKIVVLDYQVGDVAGLKSVSLLIKGVYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DSNS+RHTSF+S  V P ++++IEI+I E + +ID +R+SGAGGQ
Sbjct: 190 KSEKGVHRLVRISPFDSNSKRHTSFTSCDVLPEINENIEIKIKEEELKIDVFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVR+TH+PT +V+ CQ ERSQ +NK +A  +L+ KL++ E++K+E    + + 
Sbjct: 250 HVNTTDSAVRLTHLPTNIVINCQNERSQTRNKERALQILKTKLFQREIKKQEINLKLIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            + EI WG QIRSY+  PYQ+VKD RTN+E      V+DGDLD F+ + L 
Sbjct: 310 VQKEISWGNQIRSYIFHPYQLVKDHRTNVESYQIESVIDGDLDLFISSFLK 360


>gi|291295687|ref|YP_003507085.1| LigA [Meiothermus ruber DSM 1279]
 gi|290470646|gb|ADD28065.1| LigA [Meiothermus ruber DSM 1279]
          Length = 365

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 150/353 (42%), Positives = 210/353 (59%), Gaps = 7/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L G  D      RL  L+ +  DP LW +   A+ + +E   L  A+   + +
Sbjct: 6   LEHRLEALRGYLDIAGKEARLKELDRQINDPSLWNDPAHARKISQEAARLRKAVEGYRRL 65

Query: 63  QDRLCDNLILL-ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  L   L L  EL+ EE      ++    L+R   E+E    ++LL      N A + +
Sbjct: 66  ESDLQGLLELWPELSPEE-----REQMQPELERAGRELEELYHQTLLGFPYAENAAIVTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA ML RMYTR+AE++ F  E +++  G EAGI  A  +++G NAYG L
Sbjct: 121 KPGAGGTEACDWAQMLYRMYTRFAERKGFSLELVDLEPGAEAGIDQAQFIVRGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+++  +R TSF+++ V P VD+S++I+I+  D RID  R+ G GGQ
Sbjct: 181 SAEAGVHRLVRPSPFNAQGKRQTSFAAVEVMPEVDESVDIQIAPEDLRIDVMRSQGKGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG+ V+CQ  RSQ KNK  A N+LR+KL+E+E +K++E     + 
Sbjct: 241 GVNTTDSAVRVVHLPTGIFVKCQVTRSQQKNKEMALNILRSKLFEIEWKKKQEELARLKG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSYVL   Q +KD RT   +  P +VLDGDL+  + A L  K
Sbjct: 301 ESRPIEWGSQIRSYVL-DKQYIKDHRTGEMRHDPENVLDGDLESLIWAGLEWK 352


>gi|256424469|ref|YP_003125122.1| peptide chain release factor 2 [Chitinophaga pinensis DSM 2588]
 gi|256039377|gb|ACU62921.1| bacterial peptide chain release factor 2 (bRF- 2) [Chitinophaga
           pinensis DSM 2588]
          Length = 362

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 147/353 (41%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L+ LGG  D  + + ++      T  P  W +   A  +++E +     +   + +
Sbjct: 9   MRDRLHVLGGFLDVQDRIAKIENDKQLTLAPGFWDDNARATSILKEIKVNKFWVDLYENV 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D+ +LL+   E +     +E +         ++  +F+S L+   D   A L ++
Sbjct: 69  QTSIEDSAVLLDFQKEGEASE--EEVAQAYHAATEALDELEFKSTLNEPEDEMPAVLTIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY  + EK+ +K   +++  G+ AGIKSA+L + G  AYG LK
Sbjct: 127 SGAGGTESQDWAEMLLRMYRMYGEKQGWKVSEIDVQYGDGAGIKSASLEMDGSFAYGLLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RRHTSF+SI+VYP+VDD+IEI ++ +D   + YR+ G GGQ+
Sbjct: 187 AESGVHRLVRISPFDANARRHTSFASIFVYPLVDDTIEIAVNPADLVWEFYRSGGKGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H+P+G++++CQQ R+Q +N+ +A  ML+++LYE EL+KREE+ N   ++
Sbjct: 247 VNKVETAVRLKHVPSGIIIECQQARTQGENREKALTMLKSRLYEEELRKREELKNAANAN 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K +I WG QIRSYV  PY+M+KD RT+ E  +   V+DG+L+ F+KA L + K
Sbjct: 307 KRKIEWGSQIRSYVFHPYKMIKDHRTDYEVGNVQPVMDGELEGFIKAYLMMSK 359


>gi|183599838|ref|ZP_02961331.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
 gi|188022110|gb|EDU60150.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
          Length = 293

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 167/292 (57%), Positives = 212/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E  + L +++ ++E  +F  + SGE DS D Y+++
Sbjct: 1   MTQGLEDVEGLLELAIEADDEDTFNEAGEELTQLQAKLEQLEFRRMFSGEYDSADCYIDL 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG+KSAT+ + G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKVIGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTESGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYELE+QK+       E 
Sbjct: 181 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEE 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 524

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 156/372 (41%), Positives = 220/372 (59%), Gaps = 29/372 (7%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +     LW +   A  + RE   L   +  +   
Sbjct: 119 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 178

Query: 63  QDRLCDNLILLELALEEDDCSIL----------------------------QETSDNLQR 94
           +  L +++ +L+LA EE+D  +                             +ET   L  
Sbjct: 179 ERELLEHIDMLKLAKEENDSELESVGVLALISQTLGMFSFSVSVSLGMINPKETLKALID 238

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++   + K+ E+LLS + D    Y+EV AGAGGTES DWA M++ MY  WA++RKF    
Sbjct: 239 MRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTV 298

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   GE AGIK AT+ + G  AYG+ K E GVHRLVRISP+DS  RRHTSF+++ V P+
Sbjct: 299 VDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPI 358

Query: 215 VDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           + D S  +EI++SD RI+ +R+ GAGGQH NTTDSAVRI HIPTG+   CQ ERSQH NK
Sbjct: 359 LGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNK 418

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           A A  +L+++L +LE+ ++  +      S TEI WG QIR+YVL PY+MVKDLRTN E +
Sbjct: 419 ASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVS 478

Query: 334 SPSDVLDGDLDD 345
            P  VL+GDLD+
Sbjct: 479 DPDSVLEGDLDE 490


>gi|46200154|ref|YP_005821.1| peptide chain release factor 2 [Thermus thermophilus HB27]
 gi|55980111|ref|YP_143408.1| peptide chain release factor 2 [Thermus thermophilus HB8]
 gi|218766794|pdb|3F1E|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766850|pdb|3F1G|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|46197782|gb|AAS82194.1| bacterial peptide chain release factor 2 (RF-2) [Thermus
           thermophilus HB27]
 gi|55771524|dbj|BAD69965.1| peptide chain release factor 2 [Thermus thermophilus HB8]
          Length = 378

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 154/347 (44%), Positives = 205/347 (59%), Gaps = 5/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD      RL  L  + EDP LW +   A+ + +E   L   +   + ++    
Sbjct: 24  KASGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLES--- 80

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   LLEL  EE      +     L+    +++    ++LL+      +A L +  GAGG
Sbjct: 81  DLQGLLELM-EELPAEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQPGAGG 139

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L  E GV
Sbjct: 140 TEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGV 199

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ VNTTD
Sbjct: 200 HRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTD 259

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE           I 
Sbjct: 260 SAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVRPIE 319

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 320 WGSQIRSYVL-DKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 365


>gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
 gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
          Length = 326

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 158/324 (48%), Positives = 228/324 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W ++ +A+ + +E + L + I      + R+ D  +L+E+++EE+D S ++E  
Sbjct: 1   MQESDFWDDINKAQEITQEAKGLKDRIDGYNNTKTRIEDLEVLIEISIEEEDESSIEEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ I++ ++  + + LLSGE D N+A + +H+GAGGT++QDW  MLLRMYTRWAEK+ 
Sbjct: 61  NEIKEIEIIIDDFKVQILLSGEYDKNNAIVSLHSGAGGTDAQDWTEMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K + ++I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVDTIDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + ++ +IEI   D R+DTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ
Sbjct: 181 EVIPELRENQDIEIKADDLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV QPY MVKD RTN
Sbjct: 241 FQNKDTAMSMLKSKLIELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   V+DGD+D+F+   L  
Sbjct: 301 TEMGNVDAVMDGDIDNFILQYLKF 324


>gi|127511745|ref|YP_001092942.1| peptide chain release factor 2 [Shewanella loihica PV-4]
 gi|126637040|gb|ABO22683.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           loihica PV-4]
          Length = 293

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 157/291 (53%), Positives = 207/291 (71%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EEDD     + +  L  ++  +E  +F  + SG  D++D YL++
Sbjct: 1   MDSGLEDVEGLLELAVEEDDEDTFNDANSELAGLEKRLEELEFRRMFSGPNDASDCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E + +K E +E+ DG+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMYLRWGEAKGYKPELIEVTDGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 181 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLFELEMHKQNAEKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|118617904|ref|YP_906236.1| peptide chain release factor 2 [Mycobacterium ulcerans Agy99]
 gi|166225111|sp|A0PQZ6|RF2_MYCUA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118570014|gb|ABL04765.1| peptide chain release factor 2 PrfB [Mycobacterium ulcerans Agy99]
          Length = 371

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 218/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +   E     + ++ ++E  +  +LLSGE D  +A +
Sbjct: 72  RRRLEDLPVLYELAAEEEGAAAGEALTEADAEFKALRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKRIEERAELDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +       WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWR 365


>gi|327329965|gb|EGE71719.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1]
          Length = 370

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 219/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A   DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAA-DDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIK+AT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKAATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +    
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|259909551|ref|YP_002649907.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
 gi|224965173|emb|CAX56705.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
          Length = 293

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 167/292 (57%), Positives = 212/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E +D     E  + L  +  ++   +F  + SGE DS D Y+++
Sbjct: 1   MTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEFRRMFSGEYDSADCYMDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E 
Sbjct: 181 HVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|83644616|ref|YP_433051.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
 gi|83632659|gb|ABC28626.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
          Length = 301

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 221/298 (74%), Gaps = 1/298 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  + ++   L D   LL++A+EE D   + E    L+ I+ +VE  +F  + +GE D 
Sbjct: 2   VVKTVDDVTGGLTDCSDLLDMAVEEQDADAVTEVETELESIRAQVETLEFRRMFAGEMDP 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+AYL++ AG+GGTE+QDWA++LLRMY RW E+R FKT+ +E   GE AGIKSAT+  +G
Sbjct: 62  NNAYLDIQAGSGGTEAQDWASILLRMYLRWGERRGFKTDLIEESPGEVAGIKSATIHFQG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYGWL+ E GVHRLVR SP+DS +RRHTSF+S++V P VDD IEI+I+ +D RID YR
Sbjct: 122 EYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEVDDDIEIDINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITH+P+G+V QCQ +RSQHKNK QA   L+AKLYELE+QKR  
Sbjct: 182 ASGAGGQHVNRTESAVRITHMPSGIVTQCQNDRSQHKNKDQAMKQLKAKLYELEIQKRNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            A   E SK++IGWG QIRSYVL     +KDLRT+IE ++   VLDGD+D+F++A+L 
Sbjct: 242 EAQQLEDSKSDIGWGSQIRSYVL-DQSRIKDLRTSIENSNCQAVLDGDIDEFIEASLK 298


>gi|261867765|ref|YP_003255687.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413097|gb|ACX82468.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 300

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ IK ++  L D   LLELA+E  D     E    L  ++ ++E  +F  + SGE D+ 
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAITELNALEQQLEKLEFRRMFSGEHDAC 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G 
Sbjct: 62  DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L  
Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDRFIEASLKA 298


>gi|260495130|ref|ZP_05815258.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
 gi|260197187|gb|EEW94706.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
          Length = 331

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 155/330 (46%), Positives = 222/330 (67%), Gaps = 1/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +   T + + W +  ++  +++      N +S  +++   + D  +L++   E  + S  
Sbjct: 1   MEKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIEDEEVLIDFV-ESGETSFE 59

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E S+  + +K +VE  +   LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW 
Sbjct: 60  SELSEKHKILKNDVEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWC 119

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             R +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTS
Sbjct: 120 NLRNYKVTELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTS 179

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P VD+++E+EI  +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+
Sbjct: 180 FASVEVVPEVDENVEVEIDPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQK 239

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD
Sbjct: 240 ERSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            RTN E  +   V+DG +DDF+ + L   K
Sbjct: 300 HRTNTEIGNVKAVMDGSIDDFINSYLRWIK 329


>gi|219682342|ref|YP_002468726.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622075|gb|ACL30231.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + 
Sbjct: 3   KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GG
Sbjct: 63  EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKDDHYDCYIDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           T++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+
Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+
Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I 
Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 303 WGNQIRSYIL-DNSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|34496516|ref|NP_900731.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
 gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
          Length = 299

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 159/294 (54%), Positives = 214/294 (72%), Gaps = 1/294 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  I   + D+  L ++   E+D   +     +L+ ++ +V   +F  +     D  + +
Sbjct: 4   LDGINATIGDSRELFDMGKSEEDDDTILAVQADLEEVEAKVAQLEFRRMFHDPMDPTNCF 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ AGAGGTE+QDWA MLLRMYTR+AE++ FK + LE+ +GE AG+ SATL I+G  AY
Sbjct: 64  IDIQAGAGGTEAQDWAGMLLRMYTRYAERKGFKVDVLELSEGEVAGVTSATLKIEGEYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L+ E GVHRLVR+SP+DSN+RRHTSFSS++VYP VDDS EI+I+ +D R DTYRASGA
Sbjct: 124 GLLRTEVGVHRLVRVSPFDSNARRHTSFSSVFVYPEVDDSFEIDINPADVRTDTYRASGA 183

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLRAKLYELEL+KR E    
Sbjct: 184 GGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWQMLRAKLYELELKKRNEAKQA 243

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            E +KT++GWG QIRSYV      +KDLRT+ E  +   V+DGDLD F++A+L 
Sbjct: 244 LEDTKTDVGWGHQIRSYVF-DQSRIKDLRTSYEVGNIKGVMDGDLDGFIEASLK 296


>gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group]
 gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica
           Group]
 gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group]
          Length = 460

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 222/358 (62%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  +++ +      D   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 92  VELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 151

Query: 60  KEIQDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            +++ ++ +   +++L  E D  D  +L+E S  ++ +   ++  +   LLSG  D   A
Sbjct: 152 NDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 211

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 212 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 271

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 272 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 331

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  +  ++R    
Sbjct: 332 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 391

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 392 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 449


>gi|241888662|ref|ZP_04775969.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
 gi|241864685|gb|EER69060.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
          Length = 372

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 155/351 (44%), Positives = 224/351 (63%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++++         ++  +R++ +     +   W +   A +L+ E + +   +    E
Sbjct: 12  EINKRITEFKTSLKIEDKTERVAEIENMMLEADFWNDSEAASLLVTESKSIKKELDEFSE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +EDD  I Q+  + +  +K  VE   F  L S E D+N A LE+
Sbjct: 72  MIDYLEHSEEMVEFLKDEDDEEIYQDLLETVVNLKNSVEDFSFRLLFSEEYDNNTAILEI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DW+ ++LRMY R+  K+  K   L    G+  G+KSAT+ I+G  AYG L
Sbjct: 132 HAGAGGTDATDWSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKIEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGG 240
           KGE+GVHR+VRISP+D + +RHTSF+SI V P  +D  I IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK  A   L++KLY+LE++++E+      
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKEKELAAIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|315127590|ref|YP_004069593.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
 gi|315016104|gb|ADT69442.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
          Length = 300

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 167/297 (56%), Positives = 210/297 (70%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  +     D   L+ELA+E +D     E    L  +  ++E  +F  + SG  DSN
Sbjct: 2   VETIDNLVAGTDDVEGLVELAVEAEDQDTFDEAQSELADLNQQLEGLEFRRMFSGSHDSN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           DAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E  DG+ AGIK AT+   G 
Sbjct: 62  DAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+I+ SD RID YRA
Sbjct: 122 YAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDINPSDLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++   
Sbjct: 182 SGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 242 KQSQEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLK 297


>gi|203287543|ref|YP_002222558.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
 gi|201084763|gb|ACH94337.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
          Length = 347

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 149/348 (42%), Positives = 220/348 (63%), Gaps = 4/348 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG FD D    +L     +  + + W +   A+ +++ +  L   I   K +  +L
Sbjct: 1   MKMYGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWKNLICQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L ++A  EDD +IL+    ++ +++ + ++    S    + D N A+L +H+GAG
Sbjct: 61  KDLRELCKIAESEDDKAILE---RDVNKLREQYKHILTLSYFKEDIDINSAFLTIHSGAG 117

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW NML R Y R++E+R +K E +++ + E  GIKS T+ IKG  AYG+LK E G
Sbjct: 118 GTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVG 176

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN T
Sbjct: 177 IHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKSEDIRVDTYRASGAGGQHVNKT 236

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K +I
Sbjct: 237 SSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDI 296

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 297 SWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344


>gi|328675334|gb|AEB28009.1| Peptide chain release factor 2 [Francisella cf. novicida 3523]
          Length = 325

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 169/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D +++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELL--ELAEEDETLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|184200580|ref|YP_001854787.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
 gi|183580810|dbj|BAG29281.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
          Length = 372

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 138/352 (39%), Positives = 220/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D +  ++ ++ L  +   P LW N  EA+ +  +  H  + +  +++I
Sbjct: 13  LRATYDSVAAVSDAEMLLKEITELEQQAAAPDLWDNPDEAQKVTSQLSHKQSKVDRLRKI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +++ELA +EDD      ++  L  I+  +   + ++LL+GE D  +A + + 
Sbjct: 73  ESRIDDLEVMVELAEDEDDQETRDASATELTSIQKALSELEIQTLLAGEYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A +L+RMY RWAE+  + T+ L+    EEAG+KSAT  +K P A+G L 
Sbjct: 133 SGAGGVDAADFAEILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKAPYAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    +EI E++ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDTVEIPETELKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++   L  Q+  +      + 
Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSR-LLLLRQEEADAKKKEMAG 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRTN E+ +PS V DG +D F+   +  +
Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTNYEEGNPSSVFDGGIDSFIDEGIRWR 363


>gi|56707356|ref|YP_169252.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669826|ref|YP_666383.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456424|ref|ZP_03664897.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370940|ref|ZP_04986945.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874190|ref|ZP_05246900.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|54112809|gb|AAV29038.1| NT02FT0149 [synthetic construct]
 gi|56603848|emb|CAG44824.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320159|emb|CAL08207.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569183|gb|EDN34837.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840189|gb|EET18625.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 325

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 170/324 (52%), Positives = 229/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
 gi|149735912|gb|EDM51798.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
          Length = 286

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 156/279 (55%), Positives = 202/279 (72%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  EE+D SI++E     +    E E  + E+LLSGE D N+A ++++AGAGGTES DWA
Sbjct: 1   MGEEENDASIVEEVEQETKEFIDEFEKTKIETLLSGEYDKNNAIVKINAGAGGTESCDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML RMYTRWAE + +KTE L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRIS
Sbjct: 61  SMLYRMYTRWAESKGYKTEVLDFLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S  V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SAVRITH
Sbjct: 121 PFNAAGKRQTSFASCDVMPDIEEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+ EE  +       EIGWG QIRS
Sbjct: 181 NPTGIVVQCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIRGEIKEIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YV+QPY MVKD RTN E T    V+DG +D F+ A L  
Sbjct: 241 YVMQPYTMVKDHRTNQEITDVGKVMDGYIDPFINAYLKW 279


>gi|256846801|ref|ZP_05552256.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
 gi|256717767|gb|EEU31325.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
          Length = 331

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 151/330 (45%), Positives = 220/330 (66%), Gaps = 1/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +   T + + W +  ++  +++      N +S  +++   + D  +L++   E  + S  
Sbjct: 1   MEKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFV-ESGEASFE 59

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E     + +K ++E  +   LL  E D N+A + +H+GAGGTE+ DWA+ML RMY RW 
Sbjct: 60  NELQTKHKILKSDIEEFEINLLLDREYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWC 119

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             + +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTS
Sbjct: 120 NLKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTS 179

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+
Sbjct: 180 FASVEVVPEVDENVEVEINPTDIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQK 239

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD
Sbjct: 240 ERSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            RTN E  +   V+DG +DDF+ + L   K
Sbjct: 300 HRTNTEIGNVKAVMDGSIDDFINSYLRWIK 329


>gi|329767964|ref|ZP_08259475.1| peptide chain release factor 2 [Gemella haemolysans M341]
 gi|328838449|gb|EGF88057.1| peptide chain release factor 2 [Gemella haemolysans M341]
          Length = 372

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 223/351 (63%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++Q++        +   QR++ +     +   W +   A +L+ E + +   +    E
Sbjct: 12  EVNKQISEFKTSLKIEEKEQRVAEIENMMLEADFWNDSETASLLVTESKSIKKELDEFSE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +EDD  I Q+  + +  +K  VE   F  L S E D+N A LE+
Sbjct: 72  MIDYLEHSEEMVEFLKDEDDEEIYQDLLETVVNLKSSVEDFSFRLLFSEEYDNNTAILEI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DW+ ++LRMY R+  K+  K   L    G+  G+KSAT+ ++G  AYG L
Sbjct: 132 HAGAGGTDATDWSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGG 240
           KGE+GVHR+VRISP+D + +RHTSF+SI V P  +D  I IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK  A   L++KLY+LE++++E       
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKERELAAIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|227112636|ref|ZP_03826292.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 293

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 167/292 (57%), Positives = 210/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EEDD     +T+  L  ++ ++   +F  + SG+ DS D YL++
Sbjct: 1   MTQGLEDVNGLLELAVEEDDEETFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL
Sbjct: 61  QAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|167622749|ref|YP_001673043.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
 gi|167352771|gb|ABZ75384.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
          Length = 293

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 156/291 (53%), Positives = 207/291 (71%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EEDD     + +  LQ ++  +E  +F  + SG  D++D YL++
Sbjct: 1   MDSGLEDIEGLLELAVEEDDEETFNDAAAELQDLERRLEELEFRRMFSGPHDASDCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRM+ RW +   +K E +E+  G+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMFLRWGDAHDYKPELIEVTGGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E 
Sbjct: 181 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|295097429|emb|CBK86519.1| bacterial peptide chain release factor 2 (bRF-2) [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 293

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 167/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MAQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VD+ I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42]
 gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42]
          Length = 322

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 225/309 (72%), Positives = 268/309 (86%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ ++ +++++ +L DN+ L+EL  EE D  I++E  D L+ +K E   +Q E
Sbjct: 1   MRERQQLDDGVNGVRQLEQQLKDNVELVELGEEEGDEGIVKEAEDALKALKAEAARRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI
Sbjct: 61  AMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI I+I+E
Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQERSQHKN+A+AW MLRA++Y
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL++
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|124007003|ref|ZP_01691832.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
 gi|123987456|gb|EAY27176.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
          Length = 324

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 152/321 (47%), Positives = 213/321 (66%), Gaps = 2/321 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
            P  W +   A+ +++E + +        ++Q+   +  IL E     +      E ++ 
Sbjct: 4   QPEFWDDPKAAEKVLKEIKSIKIWTERFDKVQNLWDELEILNEFLEAGEGSET--EVTNL 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             +++  ++  +F+ +LS E D  +A +E++ GAGGTES DWA ML+RMY  W EK  +K
Sbjct: 62  FSKLEKALDELEFQKMLSDEEDPLNALIEINPGAGGTESMDWAGMLMRMYIMWGEKNNYK 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +    GE AG+KS TL I+G  AYG LK E GVHRLVRISP+DS  RRHTSF+S++ 
Sbjct: 122 VREVNYQAGEAAGVKSVTLEIEGDFAYGHLKAEIGVHRLVRISPFDSGGRRHTSFASVFA 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YPVVDD+IEIEIS +D   DT+RA GAGGQ+VN  ++AVR+ H P+G++V+CQQERSQ +
Sbjct: 182 YPVVDDTIEIEISPADIEWDTFRAGGAGGQNVNKVETAVRLKHKPSGIIVECQQERSQLQ 241

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK +A  MLR++LY++E++K+ E     E SK  I +G QIRSYVL PY+MVKDLRT  E
Sbjct: 242 NKDKAMKMLRSRLYQVEMEKKNEARAKVEGSKKRIDFGSQIRSYVLHPYKMVKDLRTGHE 301

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
           ++   +VLDGDL D+MKA L 
Sbjct: 302 RSDVQNVLDGDLSDYMKAFLM 322


>gi|118496781|ref|YP_897831.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida U112]
 gi|194324538|ref|ZP_03058310.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
 gi|118422687|gb|ABK89077.1| peptide chain release factor 2 [Francisella novicida U112]
 gi|194321373|gb|EDX18859.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
          Length = 325

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 171/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     VKDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRVKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0770_41L09]
          Length = 331

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 174/323 (53%), Positives = 222/323 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +AK  + E   L   +     +   + +   L+EL  EE+D  +  E +
Sbjct: 1   MVQPGFWDSQDQAKATIDESNRLKGWLDPWSSLDAGVSELTALVELLEEEEDAELDAEFT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++E  +  ++L GE D  DA + +H GAGG ESQDWA ML+RMYTRW+E+R 
Sbjct: 61  RGLASVEKDLEVLEVRTMLQGEDDHRDAIVTIHPGAGGLESQDWAGMLMRMYTRWSERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++   EE GIKSATL IKG  AYG+LK E GVHRLVRISP+D  SRRHTSF+S+
Sbjct: 121 FGIEVLDLQLAEEGGIKSATLEIKGECAYGYLKAEGGVHRLVRISPFDQQSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TDSAVRITH PTG+V  CQQERSQ
Sbjct: 181 FIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVATCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK+ A  MLRA LY+  LQ++E    + E++KTEIG+G QIRSYV QPY MV D RT 
Sbjct: 241 HKNKSTAMKMLRAALYQHALQEQERERAVLEATKTEIGFGNQIRSYVFQPYTMVNDHRTE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           ++ T    V+DGDLD F++A L 
Sbjct: 301 LKITDVQGVMDGDLDPFIEAYLK 323


>gi|15842676|ref|NP_337713.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
 gi|13882995|gb|AAK47527.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
          Length = 371

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 219/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE   +     ++    L+ ++ ++E  +  +LLSGE D  +A +
Sbjct: 72  RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL E    +     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERXRLEERAELDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++      WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +  +
Sbjct: 312 KADGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 365


>gi|312877708|ref|ZP_07737662.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795509|gb|EFR11884.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 316

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 162/307 (52%), Positives = 216/307 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L + I   +++  +  D  +L EL+L+E +  + +E    L  ++ ++E  + E
Sbjct: 1   MQKIKRLKDKIERFQKLYSQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL+G  D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGI
Sbjct: 61  VLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I G NAYG+LK E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E
Sbjct: 121 KNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL 
Sbjct: 181 EDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLL 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           EL+ ++R E     +  +TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D 
Sbjct: 241 ELKEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDV 300

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 301 FINAYLK 307


>gi|296104552|ref|YP_003614698.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059011|gb|ADF63749.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 293

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 168/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MAQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VD+ I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays]
 gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays]
 gi|223950205|gb|ACN29186.1| unknown [Zea mays]
          Length = 449

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 220/358 (61%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++N +          + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 85  VELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSLTEVKDKVKLL 144

Query: 60  KEIQDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            + + ++ +   +++L  E D  D  +L+E S  ++ +   ++  +   LLSG  D   A
Sbjct: 145 NDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 204

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 205 VINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYA 264

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+ ++I E D  I   RA 
Sbjct: 265 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAG 324

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  + L++R    
Sbjct: 325 GKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEI 384

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 385 KQIRGDIVKAEWGQQIRNYVFHPYKLVKDVRTGCETSDITGVMDGELDPFIRAYLKYK 442


>gi|212637017|ref|YP_002313542.1| peptide chain release factor 2 [Shewanella piezotolerans WP3]
 gi|212558501|gb|ACJ30955.1| Peptide chain release factor 2 [Shewanella piezotolerans WP3]
          Length = 293

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 157/291 (53%), Positives = 206/291 (70%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EEDD     + S  L  ++  +E  +F  + SG  D+ D YL++
Sbjct: 1   MDSGLEDIEGLLELAVEEDDEETFNDASAELDDLEKRLEELEFRRMFSGPHDAADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRM+ RW E   +K E +E+ DG+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ ++       E 
Sbjct: 181 HVNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLRQNADKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
 gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
          Length = 382

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 139/355 (39%), Positives = 215/355 (60%), Gaps = 3/355 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + ++  L    D +     L+ L  +  DP  W+   +A+ ++ E   + + ++  K  +
Sbjct: 20  AARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFR 79

Query: 64  DRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ D   ++EL  E    D ++  E ++ +  I   ++  +   LLSG  D   A + +
Sbjct: 80  AKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITI 139

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA MLLRMY RWA +  FK+  +E   GEEAGIKSATL I G  AYG++
Sbjct: 140 TAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYI 199

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGG 240
            GE+G HRLVR SP++S   R TSF+ + V P++++S IE+EI E D  I T R+ G GG
Sbjct: 200 SGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGG 259

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVR+THIPTG+ ++C +ERSQ +NK +A  +L++KL  +   +R        
Sbjct: 260 QNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEDQRAAEIKEIR 319

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +  WG+QIR+YV  PY++VKDLRTN+E +  S ++DG+L+  + A L  K+
Sbjct: 320 GDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSKQ 374


>gi|330504612|ref|YP_004381481.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
 gi|328918898|gb|AEB59729.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
          Length = 304

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 169/301 (56%), Positives = 221/301 (73%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  I ++   L D+  LLE+A EE+D   + +    ++R++  +E  +F  + SGE
Sbjct: 2   LAQIVETIDDLTGSLADSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+ YL++ AG+GGTE+QDWAN+LLRMY RWA+KR F  E +E+ +GE AGIK AT+ 
Sbjct: 62  MDANNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDGYLEASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|312879986|ref|ZP_07739786.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
 gi|310783277|gb|EFQ23675.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
          Length = 374

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q   L    D   A  R+  L  +  DP  W    +A+   RE   L       + +
Sbjct: 13  LRSQACELRDSLDLPAAETRIEGLLKQAADPEFWT-REDAQETTRELAQLQQKRESWETL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L +   L  L  E +D  + +E        + E+E +Q   LL  E D +DA + +H
Sbjct: 72  NRELQEMETLAALLAEGEDVDLEEEFYRRAGAFEKELERRQIFVLLDEEYDRSDAIVTIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG +SQDW  +L RMY RW EK  FK+  L+    +EAGIKS T  + G  AYG+LK
Sbjct: 132 AGAGGLDSQDWTEILSRMYLRWVEKEGFKSRILDQLADQEAGIKSITFEVLGDYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+GVHRLVRISP+D+  RRHTSF+S+ V PV+ +  +IEI   D ++DT+R+SGAGGQ+
Sbjct: 192 GEKGVHRLVRISPFDAAKRRHTSFASVEVLPVLPEDADIEIRPEDLKMDTFRSSGAGGQY 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITHIPTG++V CQ ERSQH N+A A  +L++KL+E +LQ+R+E     +  
Sbjct: 252 VNMTDSAVRITHIPTGIIVSCQVERSQHMNRATALQVLKSKLFERQLQERQEHLESLQGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K  I WG QIRSY LQP+Q+VKD R+  E  + + VLDGDL++ + +TL   K
Sbjct: 312 KRSIAWGSQIRSYTLQPFQLVKDHRSGCEVGNVAAVLDGDLEELIMSTLRFFK 364


>gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
 gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
          Length = 322

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++S I +++  L D++ ++EL   E D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDDGVVAEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA MLLRMYTRWAE   FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ V+PV+DDSI+I+I E
Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVIDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VL+G+LDD
Sbjct: 241 EMELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|257791746|ref|YP_003182352.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|317487783|ref|ZP_07946376.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325831767|ref|ZP_08164956.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
 gi|257475643|gb|ACV55963.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|316913058|gb|EFV34574.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325486436|gb|EGC88886.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
          Length = 364

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 149/353 (42%), Positives = 214/353 (60%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+++++    G    D     L+ L+ +   P  W +   A+ + ++   L + I+   E
Sbjct: 11  KVAQRVEAAHGYLHIDERAAELAKLDEEIAQPGFWDDASHAQSVSKQASVLRDTIAEYDE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D     +LA E  D    +E S  L ++   ++  +  S  S   D  DA L V
Sbjct: 71  AAALLDDARAAFDLASE--DELFAEEASAALDKLDELLDALEISSWFSERFDGGDAILTV 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + G+GG E+QDW +ML RMY R+AEK+ +K   L++  GE  G+  AT+ I+G NA+G L
Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTVLDVVPGEGIGLDKATIQIEGRNAFGML 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP D   RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ
Sbjct: 189 KSESGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPT +VV CQ E+SQ +NK  A+ +L+AKLYE E QKR+E       
Sbjct: 249 CVNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRQEELAELRG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +  +G QIR+YVL PYQMVKD+R+ IE  +   VLDG+LD+F+      +
Sbjct: 309 DRMDNTFGSQIRNYVLYPYQMVKDVRSGIETGNVDAVLDGELDEFVIGYHRWR 361


>gi|121587849|ref|ZP_01677606.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121728386|ref|ZP_01681414.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|147673826|ref|YP_001216157.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|153216950|ref|ZP_01950714.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|153801991|ref|ZP_01956577.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|153818695|ref|ZP_01971362.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|153822281|ref|ZP_01974948.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|153826509|ref|ZP_01979176.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|153829166|ref|ZP_01981833.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|227080844|ref|YP_002809395.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|229505715|ref|ZP_04395225.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229508711|ref|ZP_04398204.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229512924|ref|ZP_04402391.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229519540|ref|ZP_04408983.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229520954|ref|ZP_04410376.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229530470|ref|ZP_04419858.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229608734|ref|YP_002879382.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|254226529|ref|ZP_04920112.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|255743877|ref|ZP_05417833.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262156096|ref|ZP_06029215.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262169962|ref|ZP_06037652.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262191216|ref|ZP_06049415.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|121547885|gb|EAX57969.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121629320|gb|EAX61752.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|124114015|gb|EAY32835.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|124122450|gb|EAY41193.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|125620933|gb|EAZ49284.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|126510775|gb|EAZ73369.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|126520177|gb|EAZ77400.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|146315709|gb|ABQ20248.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|148875355|gb|EDL73490.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|149739689|gb|EDM53896.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|227008732|gb|ACP04944.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|227012488|gb|ACP08698.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|229332243|gb|EEN97731.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229342187|gb|EEO07183.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229344229|gb|EEO09204.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229350173|gb|EEO15126.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229354235|gb|EEO19165.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229357938|gb|EEO22855.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229371389|gb|ACQ61812.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|255738508|gb|EET93897.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262021696|gb|EEY40407.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262030132|gb|EEY48777.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262032918|gb|EEY51457.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|327483462|gb|AEA77869.1| Peptide chain release factor 2 [Vibrio cholerae LMA3894-4]
          Length = 299

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 166/297 (55%), Positives = 216/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I ++   + D   LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+
Sbjct: 1   MDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSS 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G 
Sbjct: 61  DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+   
Sbjct: 181 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 KQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 296


>gi|218885659|ref|YP_002434980.1| peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|65736690|dbj|BAD98502.1| peptide release factor 2 [Desulfovibrio vulgaris]
 gi|218756613|gb|ACL07512.1| Peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 376

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 219/354 (61%), Gaps = 5/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q   L G  D      RL  +  +   P  W N  +   +++E+  L+  I+ ++ +
Sbjct: 14  LIDQYASLWGRLDLAGNRNRLDEIERQLSSPDAWNNPEKLTPVLQEKSQLEGEITRLERL 73

Query: 63  QDRLCDNLILLELALEE-----DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           +    D    L LA EE          L+  ++ +  ++  ++  +   LLSG+ D   A
Sbjct: 74  ETCRRDVTEWLTLAEEEEAAGEPGQEALESLAEQVTVLQNLLQETEMNMLLSGKEDRMPA 133

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +E+H GAGGTE+QDWA ML+RMY RWA+    K E L+   G+EAG+KS TL + GPNA
Sbjct: 134 IVEIHPGAGGTEAQDWAEMLVRMYLRWADTHDMKAEYLDYLAGDEAGVKSVTLRMAGPNA 193

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P V   I ++I E+D RID +R+SG
Sbjct: 194 YGLLKGEKGIHRLIRISPFDSSGRRHTSFASVDVIPDVGQEITVDIKETDLRIDIFRSSG 253

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTT SAVRITH+PTG+  QCQ E+SQH N+  A  +LRA+LYELEL+K EE   
Sbjct: 254 PGGQSVNTTSSAVRITHLPTGISAQCQNEKSQHSNRDTAMQILRARLYELELRKLEEEKK 313

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              + K  IG+G QIR+Y LQPY++VKD RTN E      VLDG +D  ++  L
Sbjct: 314 AQYAGKDAIGFGSQIRTYTLQPYRLVKDHRTNTEIGDVEAVLDGRIDQLLRDYL 367


>gi|257063623|ref|YP_003143295.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
 gi|256791276|gb|ACV21946.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
          Length = 369

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 145/354 (40%), Positives = 212/354 (59%), Gaps = 4/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++         +     L  LN +   P  W +   A  + +    + + +   + 
Sbjct: 13  ELAERVAAAREYRHINENESLLEKLNEEIASPDFWNDSQNALQVSKRASEVRSILDEYEH 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLE 120
           +   L D     EL+    D  +  E  D L+R +   ++  +  S  SGE D  DA + 
Sbjct: 73  VASLLEDARTADELSA---DDEMFAEERDELRRQLSDLLDGLEVSSWFSGEMDPCDAIVS 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++ G GG E+QDW +ML +MY+++AEK+ +K   L+I  GE  G+  A + I+G NAYG 
Sbjct: 130 INPGQGGLEAQDWVDMLYKMYSKYAEKKGWKVRLLDITPGEVIGLDRAVIQIEGKNAYGM 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVRISP D   RR T+F+ + V PVVDD IE++++ +D R+D YR+SG GG
Sbjct: 190 LRSENGVHRLVRISPTDDKKRRQTTFAGVEVLPVVDDEIEVDLNVNDVRVDVYRSSGPGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ ++SQ +NK  A+ +LRAKLYELE QKREE  +   
Sbjct: 250 QCVNTTDSAVRLTHIPTGIVVTCQNQKSQLQNKDAAFKVLRAKLYELERQKREEEIDALR 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + +  +G QIR+YVL PYQ+VKDLR+ IE  +   VL GD+++F+      +
Sbjct: 310 GERMDNSFGSQIRNYVLYPYQLVKDLRSGIETGNVDAVLSGDIEEFVIGYHRWR 363


>gi|182416046|ref|YP_001821112.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
 gi|177843260|gb|ACB77512.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
          Length = 341

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 160/327 (48%), Positives = 215/327 (65%), Gaps = 3/327 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDCSILQ 86
              P  W +   A+  + +   L  A+  +     ++ D  +++EL   A E +  S  Q
Sbjct: 1   MGAPTFWDSNERAQKHIAKLNGLKKAVLPVVAFHKKVEDLDVMVELVEAASEGERESYAQ 60

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   N+  +  E++  +  S L+G+ D N+A L + +GAGGTES DWA+ML RMY RWAE
Sbjct: 61  ELDSNVTAMVEELDALEIASFLTGQFDRNNAILSIQSGAGGTESNDWADMLFRMYNRWAE 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +R F  E  ++  G++AGI  ATLLIKG NAYG+ K E+GVHRLVRISP+D+N RRHTSF
Sbjct: 121 RRGFSIEVQDVQAGDQAGITKATLLIKGENAYGYAKAERGVHRLVRISPFDANKRRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ V   + + +++EI+E+D RID YR+SG GGQ VNTTDSAVRITH+ +G+VV CQ E
Sbjct: 181 CAVDVVAEITEDVDVEINENDLRIDVYRSSGKGGQGVNTTDSAVRITHLSSGIVVVCQNE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ KNKA A N+L+A+LYE +  ++    +     K EIGWG QIRSYVLQPYQMVKDL
Sbjct: 241 RSQLKNKAAAMNVLKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDL 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT +  +    VLDGDLD F+ A L  
Sbjct: 301 RTGVSTSDTQGVLDGDLDRFVNAWLRA 327


>gi|328676241|gb|AEB27111.1| Peptide chain release factor 2 [Francisella cf. novicida Fx1]
          Length = 325

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 170/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 406

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 131/356 (36%), Positives = 214/356 (60%), Gaps = 3/356 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L R++  +    D      RL+ L  +     LW +   A+  + +   +   +  +++
Sbjct: 41  ELVRRVGEVLASSDIAEKKARLADLELQASQDTLWDDPDAAQRTLSDLAEVKENLDLLQQ 100

Query: 62  IQDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++++ +  +++EL  E++  D  ++QE S+ +  +   ++  +   LLSG  D   A +
Sbjct: 101 FENKVEEAQLIIELMGEKEGPDGGLVQEASEIVSWLSNALDKFELAKLLSGPYDRRGARV 160

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGGT++QDWA MLLRMY+RWAEK+ +  + +E   GEEAGIKS T  + G  AYG
Sbjct: 161 TISAGAGGTDAQDWAEMLLRMYSRWAEKQGYTVKVMEKSPGEEAGIKSVTFEVDGRFAYG 220

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGA 238
           +L  E+G HRLVR SP+++   R TSF+ + V P+ ++ S+++EI E++  + T RA G 
Sbjct: 221 YLASEKGTHRLVRQSPFNAKGLRQTSFAGVEVMPIFEEESLDVEIPETELEVTTTRAGGK 280

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++AVRI HIPTG+ V+C +ERSQ  NK +   +L+AKL  + L+++      
Sbjct: 281 GGQNVNKVETAVRIVHIPTGIAVRCTEERSQLANKIKGLRLLKAKLLVIALEQKASDLKE 340

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L  F+ A L  K
Sbjct: 341 IRGDVVKAEWGQQIRNYVFHPYKLVKDVRTATETSDVAGVMDGELGSFITAFLRWK 396


>gi|218890021|ref|YP_002438885.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
 gi|218770244|emb|CAW26009.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
          Length = 303

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 168/301 (55%), Positives = 224/301 (74%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           +   +  + ++   L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE
Sbjct: 1   MAQVVETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGE 60

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ 
Sbjct: 61  MDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVH 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RID
Sbjct: 121 IKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 181 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L
Sbjct: 241 RTAASQALEDSKSDIGWGHQIRSYVL-DQSRIKDLRTGIERSDCDKVLDGDLDEYLEASL 299

Query: 352 A 352
            
Sbjct: 300 K 300


>gi|254372144|ref|ZP_04987636.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569874|gb|EDN35528.1| peptide chain release factor 2 [Francisella novicida GA99-3549]
          Length = 325

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 171/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLNELL--ELGEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     I DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|208780604|ref|ZP_03247943.1| peptide chain release factor 2 [Francisella novicida FTG]
 gi|254373627|ref|ZP_04989111.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|151571349|gb|EDN37003.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|208743579|gb|EDZ89884.1| peptide chain release factor 2 [Francisella novicida FTG]
          Length = 325

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 171/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     I DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|298244286|ref|ZP_06968092.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
 gi|297551767|gb|EFH85632.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
          Length = 337

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 137/320 (42%), Positives = 211/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
            P  W +  +A+  M++   L   ++  +++  +L D   L  +  EE D  +  E + +
Sbjct: 2   QPDFWSDNRKAQAHMQQLNALREEVTTWEQLATQLKDLQELALMLEEEPDDDMQAEVAQS 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  I+ ++E  +F  +LSGE D  +A L +HAG+GG ++QDWA MLLRMY RWA++ +F+
Sbjct: 62  IHPIEEQIEKLEFALMLSGEHDEKNAILSIHAGSGGVDAQDWAEMLLRMYLRWADQHRFR 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           T+  +  +GEEAGIKSAT+ I+G  AYG+L+ E G HRL+R+SP+D+  RR TSF+ + +
Sbjct: 122 TQIYDYSEGEEAGIKSATVEIEGRFAYGYLRSEAGTHRLIRLSPFDAAHRRQTSFAKVEL 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P ++++IEI I   D  +DTYR++GAGGQHVN TDSAVR+ H+P+G+VV CQ ERSQ +
Sbjct: 182 MPDIENTIEISIRPEDIEVDTYRSTGAGGQHVNKTDSAVRMRHVPSGIVVTCQNERSQLQ 241

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  +L+A+L+ELE +K +E A   +    +  +G QIRS ++ PY + KD RTN E
Sbjct: 242 NREVALKILKARLFELEQKKHDEEAARLKGEHVQADFGTQIRSVIVHPYNIAKDHRTNHE 301

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  +  L G++D F+ A L
Sbjct: 302 TSDTTAYLAGNVDPFIHAYL 321


>gi|325474491|gb|EGC77678.1| peptide chain release factor 2 [Treponema denticola F0402]
          Length = 320

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 163/309 (52%), Positives = 211/309 (68%), Gaps = 1/309 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M E + L N I   +E+ D + D  +L+EL+ E  +  + +E   N   +  + +     
Sbjct: 1   MGEIKALKNRIYPWQELMDEVSDLEVLMELSEESGNEELSEEIGSNYNSVYEKYKKLSIL 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGE D NDAYL VHAGAGGTE+ DWA ML+RMY RW E R FKTE +++ + E  GI
Sbjct: 61  SLLSGEVDKNDAYLTVHAGAGGTEACDWAGMLVRMYLRWCESRGFKTETIDVVEAE-GGI 119

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT  I G  A+G LK E G+HRLVRISP+DSN RRHTSF+S++ +PV+DD+IE++I  
Sbjct: 120 KSATFQISGEFAFGLLKSETGIHRLVRISPFDSNGRRHTSFTSVFAFPVLDDTIEVDIRP 179

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRA GAGGQHVN TDSAVRITHIPTG+VV CQ +RSQ  N+A A N+L+++LY
Sbjct: 180 EDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQTQRSQISNRATAMNVLKSRLY 239

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
               +++E+      + K  I WG QIRSYV QPY MVKD RT  E  +   V+DGD+D+
Sbjct: 240 NYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDE 299

Query: 346 FMKATLAIK 354
           F+ + L  K
Sbjct: 300 FINSFLNTK 308


>gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis]
          Length = 458

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 139/354 (39%), Positives = 214/354 (60%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +          Q ++ L +K  +   W +   A+  +     + + I  + E +
Sbjct: 97  SERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFK 156

Query: 64  DRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ D   +++L  E D  D  +L+E S  ++ +   +E  +   LLSG  D   A + +
Sbjct: 157 TKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISI 216

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSA + ++G  AYG+L
Sbjct: 217 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYL 276

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP+++   R TSFS I V P+  ++S+++E+ E D  I   RA G GG
Sbjct: 277 SGEKGTHRIVRQSPFNAKGLRQTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGG 336

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  + +++R        
Sbjct: 337 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIR 396

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 397 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLKYK 450


>gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 138/355 (38%), Positives = 215/355 (60%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +   +          + L+ L  K  D   W +  +A+  +     + + I  + + 
Sbjct: 88  ISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDF 147

Query: 63  QDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + ++ D   +++L  E D  D  +L+E ++ ++ +   ++  +   LLSG  D   A + 
Sbjct: 148 KTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVIS 207

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+
Sbjct: 208 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGY 267

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239
           L GE+G HR+VR SP+++   R TSFS + V P+  ++S+++EI E D  I   RA G G
Sbjct: 268 LSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKG 327

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R       
Sbjct: 328 GQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQI 387

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 388 RGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 442


>gi|225430898|ref|XP_002276037.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 454

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 138/355 (38%), Positives = 215/355 (60%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +   +          + L+ L  K  D   W +  +A+  +     + + I  + + 
Sbjct: 91  ISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDF 150

Query: 63  QDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + ++ D   +++L  E D  D  +L+E ++ ++ +   ++  +   LLSG  D   A + 
Sbjct: 151 KTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVIS 210

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+
Sbjct: 211 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGY 270

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239
           L GE+G HR+VR SP+++   R TSFS + V P+  ++S+++EI E D  I   RA G G
Sbjct: 271 LSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKG 330

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R       
Sbjct: 331 GQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQI 390

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 391 RGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 445


>gi|157960584|ref|YP_001500618.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
 gi|157845584|gb|ABV86083.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
          Length = 293

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 155/291 (53%), Positives = 206/291 (70%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     + +  LQ ++  +E  +F  + S   D++D YL++
Sbjct: 1   MDSGLEDIEGLLELAVEENDEETFNDAAAELQGLEKRLEELEFRRMFSKPHDASDCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRM+ RW E   +K E +E+  G+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTAGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E 
Sbjct: 181 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|229525316|ref|ZP_04414721.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
 gi|229338897|gb|EEO03914.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
          Length = 299

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 166/297 (55%), Positives = 214/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I ++   + D   LLELA+E +D     E    L  +   +E  +F  + SG+ DS+
Sbjct: 1   MDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELGARLEQLEFRRMFSGDHDSS 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G 
Sbjct: 61  DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+   
Sbjct: 181 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 KQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 296


>gi|291442144|ref|ZP_06581534.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291345039|gb|EFE71995.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 375

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 137/352 (38%), Positives = 200/352 (56%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG    +
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-N 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
              +D  VRITH+PTG++     ERS+ +NK  A N+L+A+L      + E+        
Sbjct: 252 PRDSDFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLGRRR-QEEQAKMDALKD 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +     G Q+RSY L PYQMVKDLRT  E  +P  V +G++D F++A +  +
Sbjct: 311 EGGNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 362


>gi|15616167|ref|NP_244472.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
 gi|10176229|dbj|BAB07324.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
          Length = 288

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 163/285 (57%), Positives = 206/285 (72%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +  EL  EE D  + QE    L+ +  E+   + + LL+   D N+A LE+H GAGGT
Sbjct: 1   MEVSYELCKEETDADLQQELEQGLKGLVKELNEFELQLLLNEPYDKNNAILELHPGAGGT 60

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWA+MLLRMYTRWAE + +K E L+   G+EAG+KS TLLIKG NAYG+LK E+GVH
Sbjct: 61  ESQDWASMLLRMYTRWAENKGYKVETLDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVH 120

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS+ RRHTSF S  V P +DDS+EIEIS  D +IDTYR+SGAGGQHVNTTDS
Sbjct: 121 RLVRISPFDSSGRRHTSFVSCEVMPELDDSVEIEISTEDLKIDTYRSSGAGGQHVNTTDS 180

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT  VV CQ ERSQ KN+ +A  ML+AKL +L+L+++++        + EIGW
Sbjct: 181 AVRITHLPTNTVVTCQSERSQIKNRERAMKMLQAKLLQLKLEEQQKELAEIRGEQKEIGW 240

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYV  PY MVKD RTN+E  + + V+DG++D F+ A L  
Sbjct: 241 GSQIRSYVFHPYSMVKDHRTNVEVGNTNAVMDGEIDSFIDAYLRW 285


>gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
 gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
          Length = 322

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 246/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+N +  I   +  L D + L+EL   E+D +++ E    L  +K +V  ++ E
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGLIELGEAENDAAVVAEAEAALAALKKDVARQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEFLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA K
Sbjct: 301 FMAATLAQK 309


>gi|189485333|ref|YP_001956274.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287292|dbj|BAG13813.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 329

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 162/323 (50%), Positives = 218/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +AK  M E   L N      ++   + D + L  LA +E+D  +L++  D 
Sbjct: 2   EPDFWNDQNKAKKTMAELDDLKNVCRLWYDMSREVKDLIDLSMLATDENDEKLLKDVEDG 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            ++++ E+   +  + L GE D N+A + +HAGAGGTES DWA +LLRMY+RWAE + FK
Sbjct: 62  SKKLEKELSVFEVRTKLGGEHDKNNAIISIHAGAGGTESCDWAQILLRMYSRWAEDKGFK 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE ++  DG+EAGIK+ T++I+G  AYG+L+ E GVHRLVRISP+DSN RRHTSFSS+ V
Sbjct: 122 TEVVDSLDGDEAGIKNITMIIRGEYAYGFLQSEIGVHRLVRISPFDSNKRRHTSFSSVDV 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P V+DSI+I I + D RIDTYRASGAGGQH+N TDSAVRITH+ T + VQ Q +RSQ K
Sbjct: 182 IPEVEDSIDIIIEDKDIRIDTYRASGAGGQHINKTDSAVRITHLATEITVQSQNDRSQIK 241

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  +L+A+LYELE +K+        + K  I W  QIRSYV  PYQ+VKD RT  +
Sbjct: 242 NRTTAMKLLKARLYELEQEKQRASYEKHYNEKGAIEWSSQIRSYVFMPYQLVKDHRTGYK 301

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
                 V+DGD+DDF+ A L+ K
Sbjct: 302 TLRMDLVMDGDIDDFISAYLSWK 324


>gi|329889563|ref|ZP_08267906.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
 gi|328844864|gb|EGF94428.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
          Length = 300

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 182/293 (62%), Positives = 222/293 (75%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D ++L ++A EE D + L++  + L+ IK      + E+LLSGEAD NDAYLE+
Sbjct: 1   MEQGLEDGIMLADMADEEGDEATLEDAREQLKAIKERAARAELEALLSGEADGNDAYLEI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA ML+RMY+RWA    ++        GE+AGIKSATL I GPNAYGWL
Sbjct: 61  NSGAGGTESNDWAGMLMRMYSRWARAHGYEVTIEAEEQGEQAGIKSATLQIAGPNAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYD+ ++RHTSF+SI V PVVDD+IEI+I+ +D R DTYRASGAGGQ
Sbjct: 121 KSESGVHRLVRISPYDAAAKRHTSFASIGVSPVVDDTIEIDINPADVRTDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVR+TH+PT  VV CQ  RSQH+N+ QAW MLRA+LYELELQKRE  A     
Sbjct: 181 HINKTDSAVRLTHVPTNTVVACQAGRSQHQNREQAWKMLRARLYELELQKREAAAQALAD 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KT+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 241 AKTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDPFMGAALAAR 293


>gi|89257152|ref|YP_514514.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315491|ref|YP_764214.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503377|ref|YP_001429442.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254368376|ref|ZP_04984394.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|254368387|ref|ZP_04984404.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|89144983|emb|CAJ80343.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130390|gb|ABI83577.1| peptide chain release factor B [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254184|gb|EBA53278.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253980|gb|ABU62486.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121281|gb|EDO65482.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 325

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 170/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|162449904|ref|YP_001612271.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
 gi|161160486|emb|CAN91791.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
          Length = 350

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 141/329 (42%), Positives = 214/329 (65%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  L   T     W +  +A+ ++R+R  +++ +   + +   + D    LEL   E D 
Sbjct: 2   LQDLTQTTLSSGFWNDQEKAQAVLRKRAQVESKLEVAQRLGREIEDLAEYLELGAAEGDE 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            ++ +       I   +   + + +LSG AD  +A + +H GAGGT+++DWA+MLLRMY 
Sbjct: 62  GVIADADAQADAIAGRLRKVELDRMLSGPADRGNAIVSIHPGAGGTDAKDWASMLLRMYL 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+ E+R +KTE ++  DG+EAGI + TL + G  AYG+L+ E GVHRLVR+SP++++  R
Sbjct: 122 RFCERRGYKTEIIDYQDGDEAGIDAVTLTVSGDAAYGYLRSEAGVHRLVRMSPFNADHTR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            T+F+++ V P  DD I I+++E D  I T RA G GGQ+VN  ++AVR+ HIPTG+ + 
Sbjct: 182 QTAFAAVEVTPDSDDEINIQVNEKDIEITTMRAGGKGGQNVNKVETAVRLRHIPTGLNIV 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           C+ ERSQH+N+A A  +L+AKLYE+ELQKRE       ++K+ I +G QIR+YVL PY++
Sbjct: 242 CRAERSQHQNRAMAMKVLKAKLYEMELQKREAEVQAYNAAKSSINFGSQIRNYVLAPYRL 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD+RT+ E T    VLDGDL+ F++A L
Sbjct: 302 VKDVRTSTEATDVDAVLDGDLEGFIEAYL 330


>gi|107103215|ref|ZP_01367133.1| hypothetical protein PaerPA_01004284 [Pseudomonas aeruginosa PACS2]
 gi|254236611|ref|ZP_04929934.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|313109107|ref|ZP_07795079.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
 gi|126168542|gb|EAZ54053.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|310881581|gb|EFQ40175.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
          Length = 300

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 168/297 (56%), Positives = 223/297 (75%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D N
Sbjct: 2   VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IKG 
Sbjct: 62  NAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+
Sbjct: 122 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRS 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   
Sbjct: 182 SGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAA 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +   E SK++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L 
Sbjct: 242 SQALEDSKSDIGWGHQIRSYVL-DQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLK 297


>gi|301100688|ref|XP_002899433.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
 gi|262103741|gb|EEY61793.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
          Length = 378

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 156/334 (46%), Positives = 217/334 (64%), Gaps = 3/334 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L+ L  +  DP LW +   A  +++    L++  + + E+  +  D   L  LA EE+
Sbjct: 32  QELAELRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHRQFLDTKELYVLAKEEE 91

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+L +    +  ++ E +  + E LLS E D++  +LE+ AGAGGT+S DW  ML RM
Sbjct: 92  DESMLGDCVSAMTVVRAEAQQLRLEFLLSHETDAHSCFLEIQAGAGGTDSCDWTAMLARM 151

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RW+E R F+ + ++   G+EAG +S  L + G  AYGW K E GVHRLVRISP+DS  
Sbjct: 152 YARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISPFDSAG 211

Query: 201 RRHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           RRHTSF+ + VYP+  +   S EIE+S  D RIDT+R+SG GGQHVN+TDSA+RITH+ T
Sbjct: 212 RRHTSFAQVRVYPMAAEGRSSAEIEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLRT 271

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQ Q +RSQH+NKA+A  MLRAKLY+ +L++  +          +  WG QIRSYVL
Sbjct: 272 GIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVL 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQ+VKD RTN  + + + VLDGD+D F++  L
Sbjct: 332 HPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKML 365


>gi|197302438|ref|ZP_03167493.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
 gi|197298336|gb|EDY32881.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
          Length = 339

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 150/330 (45%), Positives = 225/330 (68%), Gaps = 1/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  + E+P  W N   ++ +M+E + L +++  I+++     D L+L++++  ED+    
Sbjct: 1   MEKRLEEPGFWDNPEVSQQVMKELKGLQDSVKEIEKLYTDYEDMLLLIDMSAGEDEEEET 60

Query: 86  QETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            E     LQ+ +   E  +  +LL G  D ++A + +HAGAGGTE+ DW  ML RMY+RW
Sbjct: 61  AEEVAEELQQFEAVFEQLRISTLLIGPYDRDNAIVTLHAGAGGTEAMDWTGMLYRMYSRW 120

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AEK+ ++ E L+  +G+ AGIK  T  +KG NAYG+L+ E+GVHRLVRISP+++  +R T
Sbjct: 121 AEKKGYELEVLDYLEGDVAGIKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNAAGKRQT 180

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S  V P +++ I+IEI+E + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ
Sbjct: 181 SFASCDVIPDIEEDIDIEINEDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 240

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH NK +A  ML++KL  L+ Q++ E  +      ++I +G QIRSYV+QPY MVK
Sbjct: 241 NERSQHMNKDKAMQMLKSKLLLLKQQEQAEKMSDIRGEVSDINFGNQIRSYVMQPYTMVK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           D RTN E ++   V+DG++D F+ A L++ 
Sbjct: 301 DHRTNAEISNVGAVMDGNIDPFINAYLSMD 330


>gi|238792836|ref|ZP_04636467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
 gi|238727944|gb|EEQ19467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
          Length = 289

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 165/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|225621552|ref|YP_002722811.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
 gi|225216373|gb|ACN85107.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
          Length = 312

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 156/309 (50%), Positives = 213/309 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L + I  ++ +     +   L+E+A+E +D  + +E       ++   +  + +
Sbjct: 1   MKERMLLLDKIEPVENLIKNSNNIYELVEMAIESNDSEMEKELETECLELQKVFDELETK 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+EAGI
Sbjct: 61  NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  +  ++G  AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IEIEI+ 
Sbjct: 121 KQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEIEINP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+AKLY
Sbjct: 181 ADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LE +K ++        KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG++D+
Sbjct: 241 QLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGNIDE 300

Query: 346 FMKATLAIK 354
           F+ A L  +
Sbjct: 301 FISAYLKQQ 309


>gi|332160509|ref|YP_004297086.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607022|emb|CBY28520.1| peptide chain release factor 2; programmed frameshift-containing
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664739|gb|ADZ41383.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863446|emb|CBX73565.1| peptide chain release factor 2 [Yersinia enterocolitica W22703]
          Length = 289

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|290476399|ref|YP_003469304.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
 gi|289175737|emb|CBJ82540.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
          Length = 286

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 164/283 (57%), Positives = 209/283 (73%), Gaps = 1/283 (0%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     E    L++++ ++   +F  + SG+ DS + YL++ AG+GGTE+
Sbjct: 3   GLLELAVEADDEETFNEAVAELEQLEEKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEA 62

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RM+ RWAE + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 63  QDWASMLMRMFLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRL 122

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 123 VRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 182

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+V QCQ +RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG 
Sbjct: 183 RITHIPTGLVTQCQNDRSQHKNKDQAMKQLKAKLYELEMQKKNADKQAMEENKSDIGWGS 242

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 243 QIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 284


>gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54]
 gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila
           LSv54]
          Length = 285

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 159/284 (55%), Positives = 206/284 (72%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLE+A EE D  I QE +  L      +   + E +  GE DS +A + +HAGAGGTE+Q
Sbjct: 2   LLEMAAEEGDQEIEQEIALKLGSFANALAAIELECMFIGEHDSCNAIISIHAGAGGTEAQ 61

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW ++LLRMY RWAE+ KFKTE L++  G+EAG KS T+LIKG  AYG+L+ E G+HRLV
Sbjct: 62  DWTDILLRMYLRWAERHKFKTEILDLLPGDEAGTKSITILIKGQWAYGYLRSELGIHRLV 121

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D++ RRHTSF+S+ V P +D++++++I E D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 122 RISPFDTSGRRHTSFASVMVMPELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKTDSAIR 181

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+PTGVVVQCQ ERSQH+NK  A  ML A++Y+LE QK+ +        K  I WG Q
Sbjct: 182 LTHLPTGVVVQCQNERSQHRNKEMAMKMLIAQIYQLEKQKKADQQEGLHGEKKGISWGSQ 241

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IRSYVLQPY+++KD RT+ E  +   VLDG LD F+KA L   K
Sbjct: 242 IRSYVLQPYRLIKDHRTDFEAGNVDAVLDGGLDGFIKAFLLWGK 285


>gi|229815728|ref|ZP_04446053.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
 gi|229808644|gb|EEP44421.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
          Length = 377

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 149/355 (41%), Positives = 207/355 (58%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  +      D A  R+  L   +  P  W +   A+  M E   +   ++ +   
Sbjct: 17  LEARLTEVEAYLHIDEARGRVGELEQASAAPGFWDDADAARAHMAELAQVKGDVALVDGA 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYL 119
           ++RL D    LELA E  +    +  ++  +    +   ++  +  S  +GE D   A L
Sbjct: 77  RERLSDARAALELAEEMGEEGGAEFVAEATEAAAELTHSIDEMELSSWFTGEFDHGSAIL 136

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +  G GG E+QDW  ML +MY ++  +R +K    +    E  GI  AT+ ++G +A+G
Sbjct: 137 SIKPGQGGLEAQDWTFMLFKMYMKYCARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFG 196

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVRISP D+  RR T+F+ + V PV+ D I+IE++  D R+D Y ASG G
Sbjct: 197 MLRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIQIEVAPDDIRVDVYHASGPG 256

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA    +L+A+LYELELQKRE+  +  
Sbjct: 257 GQGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELQKREDTLDEI 316

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
              KTEIG+G QIRSYVL PYQMVKDLR  +E ++   VL DGDLD F+      
Sbjct: 317 RGPKTEIGFGNQIRSYVLYPYQMVKDLRCGVETSNVDGVLEDGDLDPFIIGYHRW 371


>gi|239996062|ref|ZP_04716586.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
          Length = 361

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 123/341 (36%), Positives = 189/341 (55%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L++ ++     Q    +     E+
Sbjct: 9   LEHLVERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQENLASAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  + +   + ++  K E+E  + E     L     D N+ +LE+ AGAGG E+ 
Sbjct: 69  -LNEDDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R ++ E +  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S  IEI+ ++ RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E +KR         S    G    
Sbjct: 248 ITHLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++GDL   +   L
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLIDPIL 347


>gi|46396627|sp|Q89AC4|RF2_BUCBP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 227/351 (64%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L  Q+N L    D+D    RL  +N + + P  W++    K + +E+  L + ++ I +
Sbjct: 14  NLVSQINKLKRRLDYDIKKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITK 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I + + + + +L L    +  SIL       + I+  +   +  S+  G+ D    Y+++
Sbjct: 74  IDNDVQELIDILNLENSNNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GG E+QDWA+MLLRMY RWAE +KFK + +E   GE  GIKSAT+ + G  A+GW 
Sbjct: 134 QSGSGGVEAQDWASMLLRMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWF 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G+HRLVR SP++++ RRHTSFSS++VYP++DD+I ++I+  D +ID YRASGAGGQ
Sbjct: 194 RTETGIHRLVRKSPFNAHHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRI H+PTG+VVQCQ +RSQHKNK QA   L+AKLYE  + +++    I E+
Sbjct: 254 HVNKTESAVRIRHLPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILEN 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K  IGWG QIRSY L     +KDLRT +E  +   VLDG LD F++ +L 
Sbjct: 314 NKLNIGWGHQIRSYTL-DNSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 363


>gi|238783657|ref|ZP_04627677.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
 gi|238715370|gb|EEQ07362.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
          Length = 289

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|330814308|ref|YP_004358547.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487403|gb|AEA81808.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 312

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 172/307 (56%), Positives = 233/307 (75%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++E+ HL+  ++  K  ++ L +   L+EL  +++D ++ +E   +L++++L++   + 
Sbjct: 2   VIKEKNHLERILNDYKSYKEELTNIKELVELNTKDNDENLTKELEMSLKKLELKIREIEL 61

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
              LS + D  D Y+E+HAGAGGTESQDWA ML  MY +WAEK+ F    +    GEE G
Sbjct: 62  FCFLSKKNDELDVYVEIHAGAGGTESQDWAEMLRTMYIKWAEKKSFSFSLISETKGEEVG 121

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            KS+T+ I+G  AYG+L+ E GVHRLVRISP+DS+ RRHTSF+S+WVYPVV++S+ ++I+
Sbjct: 122 FKSSTIKIEGKYAYGFLRHESGVHRLVRISPFDSDKRRHTSFASVWVYPVVNESVVVDIN 181

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D RIDTYR+SGAGGQHVNTTDSAVRITH PT +VVQCQ ERSQHKNK  A NML+A+L
Sbjct: 182 DKDLRIDTYRSSGAGGQHVNTTDSAVRITHQPTNIVVQCQNERSQHKNKDTAMNMLKARL 241

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELELQK++E +   ESSKT+IGWG QIRSYVLQPYQMVKD RT +E+T P  VLDG L+
Sbjct: 242 YELELQKKKEESKSVESSKTDIGWGHQIRSYVLQPYQMVKDSRTGLERTDPDKVLDGHLN 301

Query: 345 DFMKATL 351
            F++ +L
Sbjct: 302 PFLEESL 308


>gi|255037742|ref|YP_003088363.1| peptide chain release factor 2 [Dyadobacter fermentans DSM 18053]
 gi|254950498|gb|ACT95198.1| bacterial peptide chain release factor 2 (bRF- 2) [Dyadobacter
           fermentans DSM 18053]
          Length = 357

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 154/350 (44%), Positives = 228/350 (65%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  LG   D+ N  Q+L  L  +T  P  W +   A+ +M+E + L    +  +E+
Sbjct: 9   LKARVEALGRYLDYANRKQQLGQLEQQTVQPEFWTDSARAEKVMKEIRGLKFWTNGYEEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   + E    E D +  +E  +  +++  +++  +F  ++  E D   A +E++
Sbjct: 69  ARLRDDLDTIWEFY--EADEATEEEVDEEGKKLADKLDEIEFRKMMGEEGDELPAVIEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML+RMY  WAEK  +K   +++ DG+ AG+KS TL I G  AYG LK
Sbjct: 127 AGAGGTESQDWASMLMRMYIMWAEKNGYKVRQVDLQDGDVAGVKSVTLEIDGEYAYGNLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++VYP+ DD+IEIE++ +D   DTYR+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFTSVYVYPLADDNIEIEVNMADITWDTYRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G+++ CQQERSQ  NK  A  +L+++LY++EL+KR       E+S
Sbjct: 247 VNKVETAVRLHHKPSGIIIACQQERSQLMNKEVAIRLLKSRLYQIELEKRNSARAEVEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYVL   + VKD RT+ + ++   VL+GD++ F+KA L 
Sbjct: 307 KRKIEWGSQIRSYVLDD-RRVKDHRTDYQTSNTEAVLNGDINAFIKAYLM 355


>gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
 gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
          Length = 324

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 154/319 (48%), Positives = 218/319 (68%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +  +A+ +  E   + + +    EI++++ +  ++LE++ E++     +E S  L+
Sbjct: 4   GFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYEKEISKTLK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            ++  V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW   +K+  +
Sbjct: 64  NLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIADKKYSYK 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
             + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTSF+S+ V+P
Sbjct: 124 ITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSFASVDVFP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ ERSQ  N+
Sbjct: 184 EIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTERSQIANR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD RTN E +
Sbjct: 244 KYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDHRTNCESS 303

Query: 334 SPSDVLDGDLDDFMKATLA 352
              DVLDGDLD F+ A L+
Sbjct: 304 QVQDVLDGDLDKFINAYLS 322


>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
 gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
           aciditrophicus SB]
          Length = 279

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 159/277 (57%), Positives = 209/277 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE+D   L+  S++++ ++  V   + + +L  E D  +A + +HAGAGGTE+QDW 
Sbjct: 1   MAKEENDEEALEAISNDIESLRKSVRESELKMMLGSEQDPMNAIVSIHAGAGGTEAQDWV 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RWAEKR FKT  ++   G+EAG+KS +  I+G  AYG+ K E G+HRLVRIS
Sbjct: 61  EMLLRMYLRWAEKRGFKTTIIDYLPGDEAGVKSVSFTIEGEYAYGYAKAEIGIHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D++SRRHTSF+S++VYP V+D I +EI E D RIDTYR++GAGGQHVN TDSAVRITH
Sbjct: 121 PFDASSRRHTSFASVFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PTG+VVQCQ ERSQHKNKA A   LR++LYEL++Q++ E  +    +K +I WG QIRS
Sbjct: 181 MPTGIVVQCQNERSQHKNKAMAMKYLRSRLYELKIQEQNEKLSEINKTKKDIAWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVLQPY+MVKD RTNIE  +   VLDGD+DD ++A L
Sbjct: 241 YVLQPYKMVKDHRTNIEIGNVGRVLDGDIDDLIEAYL 277


>gi|224543374|ref|ZP_03683913.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523701|gb|EEF92806.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
          Length = 371

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 148/360 (41%), Positives = 207/360 (57%), Gaps = 7/360 (1%)

Query: 2   KLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           ++   L     L D        +   + +  L  +T D H W +   A  +      +  
Sbjct: 5   EIKNGLEDARLLLDQLYVSANIEVLKREIEGLTVQTMDEHFWDDQAHATKVYAHLNEMKK 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
                  ++    + + + E   + +D   +    ++       ++  +   L   E D 
Sbjct: 65  VADTDASLEASYKELMEVYEYVKDTEDPDFMASLEEDYMTFHKNLDEFEKTLLFDQEYDH 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           ++A +E+H GAGGTESQDWA ML+RMY R+ EK+ +K +  +   G+EAG+KS ++   G
Sbjct: 125 SNAIVEIHPGAGGTESQDWAEMLMRMYIRYGEKKGWKVDVDDYLAGDEAGLKSCSIRFTG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            NAYG L+ E+GVHRLVRISP+DS+ RRHTSF+S+ V P +DD IEI I   + RIDTYR
Sbjct: 185 YNAYGHLRAEKGVHRLVRISPFDSSKRRHTSFASVEVSPELDDDIEITIDPKNLRIDTYR 244

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQH+N TDSAVRITHIPT  VV CQ +RSQ +N+ QA  ML++KLY L  ++  E
Sbjct: 245 ASGAGGQHINKTDSAVRITHIPTNTVVSCQSQRSQLQNREQAMLMLKSKLYLLMQEEHAE 304

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  +  K  I WG QIRSYVL PY MVKD R+  E      +LDG+LDD + A L  +
Sbjct: 305 KLSEIQGEKKNIEWGSQIRSYVLHPYSMVKDNRSGYESNDQKKILDGELDDLIYAYLRSQ 364


>gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
 gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
          Length = 329

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 221/327 (67%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +T     W +  +A+ +  E   + + +    EI++++ +  ++LE++ E++     
Sbjct: 1   MQQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYE 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E S  L+ ++  V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW 
Sbjct: 61  KEISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWI 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTS
Sbjct: 121 ADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ 
Sbjct: 181 FASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQT 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD
Sbjct: 241 ERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
            RTN E +   DVLDGDLD F+ A L+
Sbjct: 301 HRTNCESSQVQDVLDGDLDKFINAYLS 327


>gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
 gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
          Length = 329

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 221/327 (67%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +T     W +  +A+ +  E   + + +    EI++++ +  ++LE++ E++     
Sbjct: 1   MQQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYE 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E S  L+ ++  V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW 
Sbjct: 61  KEISKTLKNLEKNVDEFKIQTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWI 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTS
Sbjct: 121 ADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ 
Sbjct: 181 FASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQT 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD
Sbjct: 241 ERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
            RTN E +   DVLDGDLD F+ A L+
Sbjct: 301 HRTNCESSQVQDVLDGDLDKFINAYLS 327


>gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group]
          Length = 498

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 222/358 (62%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  +++ +      D   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 130 VELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 189

Query: 60  KEIQDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            +++ ++ +   +++L  E D  D  +L+E S  ++ +   ++  +   LLSG  D   A
Sbjct: 190 NDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 249

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 250 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 309

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 310 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 369

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  +  ++R    
Sbjct: 370 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 429

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 430 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 487


>gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
 gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
          Length = 356

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 183/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       +   L     DP +  N  E +   +    L   ++  +E +  L     
Sbjct: 1   MLDKLQAIEDKYLELENLISDPDIIANQSEWQKHAKAHAKLTEIVTKFREYKKVLQGMDD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  E+ D    +     L  +K +     E  +   L     D  +  +E+ AGAGG
Sbjct: 61  AREMLKEKLDDDFREMVEAELAELKAKCVRLEEELRILMLPKDPNDEKNVIIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + ++ E L+ +  +  G K     I+G  AY   K E GV
Sbjct: 121 DEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVVFSIQGDGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS  ++ V P  DD  ++ I+ SD RIDTY ASGAGGQHVN T+
Sbjct: 181 HRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLRIDTYCASGAGGQHVNKTE 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ E+SQ KN+ +A  +LRAKL  LE  + E+ A + ++ K+++G
Sbjct: 241 SAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKL--LEAAQEEQRAQLAQTRKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + A +   +
Sbjct: 299 TGDRSERIRTYNF-PQGRVTDHRIGLTLHKLDFILNGDLDELINALVTADQ 348


>gi|78044242|ref|YP_359035.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996357|gb|ABB15256.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 371

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 226/353 (64%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S ++  +    D     + +  L  KT +P  W N  EA+  ++E   L + I   +E
Sbjct: 11  EISPKIEEMRVSLDIPGKKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +LL+L  EE++  +  E  D  +++  ++   + E LLSG  D N A + +
Sbjct: 71  LLKAQEELTVLLQLLEEEENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  ML RMYTRWAE + +K E ++   GEEAG+KS T  ++G  AYG+L
Sbjct: 131 HAGAGGTEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGG 240
           K E+GVHRL+RISP+D + RRHTSF+S+ V P V + I  IE+ E + +I+T+R+ GAGG
Sbjct: 191 KAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+PTG+ V CQ ERSQ  N+A A  +L+AKL +LE++K+EE      
Sbjct: 251 QHVNKTESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLR 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + EI WG QIR+YV  PY +VKD RT +E      V+DG++D F++A L +
Sbjct: 311 GEQKEIAWGSQIRTYVFHPYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAYLKM 363


>gi|327403921|ref|YP_004344759.1| peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM
           16823]
 gi|327319429|gb|AEA43921.1| bacterial peptide chain release factor 2 (bRF-2) [Fluviicola
           taffensis DSM 16823]
          Length = 360

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 222/352 (63%), Gaps = 3/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++++++ +           +L     KT+DP+ W +  +A+  M++ + L   I     
Sbjct: 9   EINQRIDAIASYLKIPEKEMQLRESELKTQDPNFWDDPKKAEAEMKDIRGLKFWIESYTR 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +  D  +L+E   E        E  +  Q +   +E  + +++LSGE D+  A +++
Sbjct: 69  LKSQSDDLEVLIEFVKEGAAEE--SECDEAYQSMLTTIEEVELKNMLSGEEDALSAVIQI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWA ML+RMY  WAEK  +K + L   +G+ AGIK+ TL I+G  A+G+L
Sbjct: 127 TAGAGGTEACDWAGMLMRMYIMWAEKSGYKVKELNFQEGDVAGIKTVTLEIEGEFAFGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G+HRLVR+SPY+S  +R TSF+S++VYP VDD+IEI ++ +D   +T+R+ GAGGQ
Sbjct: 187 KGENGIHRLVRVSPYNSQGKRMTSFASVYVYPSVDDTIEIYVNPADITFETFRSGGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H  +G++++  + RSQ  NK +A  +LR++LYE+EL+KR E  +  E+
Sbjct: 247 NVNKVETAVRLRHAASGIIIENSESRSQLANKEKAMQLLRSQLYEIELRKRAESRDQIEA 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K +I WG QIRSYVL   + VKD RT+     P  VLDGDL  F+K+ L +
Sbjct: 307 GKKKIEWGSQIRSYVLDD-RRVKDHRTDYSVNDPDKVLDGDLLPFLKSFLMM 357


>gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
 gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
          Length = 329

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 220/327 (67%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +T     W +  +A+ +  E   +   +    EI++++ +  ++LE++ E++     
Sbjct: 1   MQQETLKQGFWDDSDKAQAIFDELNSIKADVENYDEIEEKIEEVKMMLEISKEDNTEEYE 60

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E S  L+ ++ +V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW 
Sbjct: 61  KEISKTLKSLEEKVDEFKIKTLLVGEYDKNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWI 120

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTS
Sbjct: 121 ADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTS 180

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V+P + DS  I+I + D ++DTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ 
Sbjct: 181 FASVDVFPEIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQT 240

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD
Sbjct: 241 ERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKD 300

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
            RTN E +   DVLDGDLD F+ A L+
Sbjct: 301 HRTNFESSQVQDVLDGDLDKFINAYLS 327


>gi|238763213|ref|ZP_04624178.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
 gi|238698486|gb|EEP91238.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
          Length = 289

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|183981542|ref|YP_001849833.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
 gi|238689234|sp|B2HGJ2|RF2_MYCMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|183174868|gb|ACC39978.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
          Length = 371

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 219/355 (61%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +  ++     + ++ ++E  +  +LLSGE D  +A +
Sbjct: 72  RRRLEDLPVLYELAAEEEGAAAGEALAEADAEFKALRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKRIEERAELDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +       WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWR 365


>gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
 gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
          Length = 300

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 148/297 (49%), Positives = 211/297 (71%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ I  +   L DN  L E++ +E D + +      +  ++  +E  +F  + S  AD +
Sbjct: 2   VAAIDHLSSNLADNTELYEMSKDEGDLAGITAIEAEVVELRAMIEKLEFRRMFSNPADPS 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKT   +  +G+ AGIK+AT+ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTTIEDESEGDTAGIKAATIKVEGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI+I+ +D R DT+RA
Sbjct: 122 YAFGHLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEIDINPADVRTDTFRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E 
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFEMRKRMEA 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVL-DQSRIKDLRTNVETSATQKVLDGDLDAFIEASLK 297


>gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|119361519|sp|Q3A928|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 358

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   ++   L+    DP +  +    +  ++    ++  +   +E +  + +   
Sbjct: 1   MFDKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D    +     L  +K   E  +       L     D  +  +E+ AGAGG
Sbjct: 61  AERMLDEKLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++A++  +K E ++ H  +  G K     I+G   Y  +K E GV
Sbjct: 121 EEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+EI+ +D RID + ASGAGGQHVN T+
Sbjct: 181 HRVQRVPTTESGGRIHTSTATVAVLPEA-EEVEVEINPNDLRIDVFCASGAGGQHVNKTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQHKNK +A  +LRA+L  L+  ++E+ A +  + K+++G
Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARL--LDKARQEQEAELASARKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VL+GDLD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLHRLDAVLEGDLDEIIDALITTDQ 347


>gi|170723283|ref|YP_001750971.1| peptide chain release factor 2 [Pseudomonas putida W619]
 gi|169761286|gb|ACA74602.1| peptide chain release factor 2 [Pseudomonas putida W619]
          Length = 304

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 167/301 (55%), Positives = 221/301 (73%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++   L D   LL++A+EE+D S + +    LQ ++ ++   +F  + SGE
Sbjct: 2   LAQVVETLDKMSGGLADCQDLLDMAVEENDESAVSDVVTELQGLEEKLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++  + VLDGD+D +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDS-RIKDLRTGVERSDCNKVLDGDIDQYLEASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
 gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
          Length = 355

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 136/347 (39%), Positives = 197/347 (56%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +++ + L  K  DP++  +    + + +E   L   +   +E +    D     ++
Sbjct: 5   LEEVLEKYNILTEKLSDPNIMSDNKTYQQIAKEHAELKPIVEKYQEYKKINEDIEEAKQI 64

Query: 76  ALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
            LE  D  +  L E      + KLE    + + LL      D  + YLE+ AG GG E+ 
Sbjct: 65  -LESGDKELKELAEMELEEGKEKLEKIENELKLLLVPKDPYDEKNIYLEIRAGTGGDEAT 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AEK ++KTE ++ +D    G K   LLIKG  AY  LK E G HR+ 
Sbjct: 124 LFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLIKGKGAYSRLKFEGGGHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   D +E+EI  SD RID +RASGAGGQHVNTTDSAVR
Sbjct: 184 RIPVTESGGRIHTSACTVAVLPEA-DDVEVEIDPSDLRIDVFRASGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ ERSQ KNK +A  +L+AK+ E+E++K++E   I  + K ++G G  
Sbjct: 243 ITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQQEA--IASNRKLQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+   +   V++G+LD+ + A +A  +
Sbjct: 301 SERIRTYNF-PQNRVTDHRINLTLYNLDQVMEGELDEIIDALIAYDQ 346


>gi|161615988|ref|YP_001589953.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|213425820|ref|ZP_03358570.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213646961|ref|ZP_03377014.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238909840|ref|ZP_04653677.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289823819|ref|ZP_06543431.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|16421591|gb|AAL21916.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161365352|gb|ABX69120.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|261248173|emb|CBG26009.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301159597|emb|CBW19116.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914062|dbj|BAJ38036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087470|emb|CBY97235.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225716|gb|EFX50770.1| Peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613439|gb|EFY10380.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621031|gb|EFY17889.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624095|gb|EFY20929.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628166|gb|EFY24955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633285|gb|EFY30027.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636137|gb|EFY32845.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639476|gb|EFY36164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647592|gb|EFY44081.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648776|gb|EFY45223.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653831|gb|EFY50157.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657937|gb|EFY54205.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664040|gb|EFY60239.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668949|gb|EFY65100.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673057|gb|EFY69164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677952|gb|EFY74015.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681128|gb|EFY77161.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687942|gb|EFY83909.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194862|gb|EFZ80049.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196613|gb|EFZ81761.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202687|gb|EFZ87727.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207826|gb|EFZ92772.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212622|gb|EFZ97439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214895|gb|EFZ99643.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222626|gb|EGA06991.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225095|gb|EGA09347.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230617|gb|EGA14735.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235032|gb|EGA19118.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239071|gb|EGA23121.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244571|gb|EGA28577.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247186|gb|EGA31152.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253331|gb|EGA37160.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256362|gb|EGA40098.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262462|gb|EGA46018.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267442|gb|EGA50926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269154|gb|EGA52609.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326624786|gb|EGE31131.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332989908|gb|AEF08891.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 293

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 170/292 (58%), Positives = 209/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MTQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 TKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 316

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 149/315 (47%), Positives = 211/315 (66%), Gaps = 2/315 (0%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
             A+ ++++ + L+  I   + ++++  D L+L + A    D S  +E S     ++   
Sbjct: 2   ENAQKILKKSKSLEKKIEEYEMVKNKFEDILVLFDFA--SQDSSFEEELSKETDNLEKIT 59

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +      +L+G+ D+N+A L VH+G GG ++QDW  MLLRMYTR+A    FK   +++  
Sbjct: 60  DSLSISIMLNGQYDANNAILSVHSGTGGLDAQDWTQMLLRMYTRFASNMGFKISYIDLQQ 119

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            +++G+KSATL I G NAYG+LK E+GVHRLVRISP+DS+ +RHTSF+S+ V P +DDSI
Sbjct: 120 DDQSGVKSATLKIDGENAYGYLKCEKGVHRLVRISPFDSSGKRHTSFASVDVLPELDDSI 179

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++EI+  D ++DTYR+SGAGGQHVN T+SA+RITHIPTGVVVQCQ ERSQ  N+  A  M
Sbjct: 180 KVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKM 239

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L AKL EL+  + ++     +   ++I WG QIRSYV QPY MVKD RTN E  +   V+
Sbjct: 240 LTAKLIELKELEHKDKIEDIQGKYSQIAWGSQIRSYVFQPYTMVKDHRTNYEVGNIGSVM 299

Query: 340 DGDLDDFMKATLAIK 354
           DGD+  F+ A L  K
Sbjct: 300 DGDIMPFINAYLVNK 314


>gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
 gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
          Length = 293

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 160/291 (54%), Positives = 215/291 (73%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LL++A+EEDD   ++  +  L+ ++ ++   +F  + S E D  +A+L++
Sbjct: 1   MESGLVDAKELLDMAVEEDDEDSVEAVTMELEELEAQLSKLEFRRMFSQEMDPTNAFLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWANMLLRMY RW E + FK E +E+  G+ AGIKSAT+  +G  A+GWL
Sbjct: 61  QAGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSAGDVAGIKSATIRFEGEYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS SRRHTSF+S+++ P +DD++EI+I+ +D R DTYR+SGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGSRRHTSFASVFLSPEIDDNVEIDINPADLRTDTYRSSGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VVQCQ +RSQH N+  A   LRAKLYE E+QKR E A   E 
Sbjct: 181 HVNTTDSAVRITHIPTGIVVQCQNQRSQHANRDFAMKQLRAKLYEFEMQKRTEAAQAVED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E ++   VLDG+LD F+ A+L 
Sbjct: 241 TKSDIGWGSQIRSYVL-DSSRIKDLRTGVESSNTGAVLDGNLDQFIVASLK 290


>gi|29839933|ref|NP_829039.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
 gi|29834280|gb|AAP04917.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
          Length = 337

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 155/329 (47%), Positives = 211/329 (64%), Gaps = 1/329 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  +T     WQ+V  A  +      L   IS  +E + ++ +    L  +    D  +
Sbjct: 3   ELEDQTLKEDFWQDVAHAGKVSERVASLKRQISDYEEFKSKVDNLTFFLNDSEASSDPEL 62

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            ++        +  +   + + LLSGE D N  +L ++AGAGGTES DW  ML RMY+RW
Sbjct: 63  REDLEKEFSVCETILAEWETQRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYSRW 122

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A   ++K E ++  +G+ AGIK  T+   G  AYG+ K E+GVHRLVRISP+DSN++RHT
Sbjct: 123 ASHHQWKAEVIDRQEGDVAGIKHITVKFSGEYAYGYAKAERGVHRLVRISPFDSNAKRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+ VYP +DD IEI+I  +D RIDTYR+SGAGGQHVN TDSAVRITHIPTG++V CQ
Sbjct: 183 SFASVDVYPEIDDEIEIDIRPNDLRIDTYRSSGAGGQHVNVTDSAVRITHIPTGIIVSCQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQ +N+     MLRA++Y+  LQ+R E   +   +K EI WG QIR+YV QPY +VK
Sbjct: 243 SERSQIQNRESCMKMLRARMYQQVLQERLEKQLLDRKNKKEIAWGSQIRNYVFQPYTLVK 302

Query: 325 DLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           D+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 303 DMRTGHETGNVQAMMDGELLDDFVKAYLA 331


>gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB]
 gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 312

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 156/298 (52%), Positives = 216/298 (72%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +   + + + L DN ++LE+ALEE+D  +L++       ++ E+   + + LL  E D 
Sbjct: 2   IVENWQRLSEELRDNELMLEMALEEEDREVLKDVHRKALSLQKELRTVELQQLLGEENDD 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            +A + ++AGAGGTE+QDWA MLLRMY RW EK+ F  + +++ +GEEAGIKS T  + G
Sbjct: 62  KNAIVSINAGAGGTEAQDWAEMLLRMYLRWCEKKSFTVQMVDMLEGEEAGIKSGTFTVSG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            +AYG LKGE G+HRLVRISP+D++ RRHTSF+++ V P VD+ IE+EI ++D RIDTYR
Sbjct: 122 SHAYGLLKGESGIHRLVRISPFDASGRRHTSFAAVLVIPEVDEKIEVEIKQADLRIDTYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T SAVRITH+PTG+VVQCQ E+SQH+N+  A  +LRA+LYE E + ++E
Sbjct: 182 ASGAGGQHVNKTSSAVRITHLPTGIVVQCQNEKSQHRNRDIALKILRARLYEREKRAQQE 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                  S  +I WG QIRSYVLQPY+++KD RT+IEK +   VLDG++DDF++  L 
Sbjct: 242 KLQEAHDSLDDIAWGNQIRSYVLQPYRLIKDHRTSIEKGNVEGVLDGEIDDFIEGYLM 299


>gi|322514782|ref|ZP_08067805.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
 gi|322119244|gb|EFX91374.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
          Length = 301

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 157/299 (52%), Positives = 213/299 (71%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRALAQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|331270451|ref|YP_004396943.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
 gi|329127001|gb|AEB76946.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
          Length = 357

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 198/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D    +   L+ K  DP +  N  E + L +E   L+  ++  +E ++   + + 
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELVA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  EE+D  + +   + ++ ++  +    E  +   L     D  + ++E+ AGAGG
Sbjct: 61  NKELLSEENDRDMKEMIQEEIKTLEESIVSDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V D ++I+I  +D RID +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLPEV-DDVDIQIDPNDIRIDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LY  E  + E  A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLY--EKAEAERAASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGVTLYKLDAFLDGDMEEIIDALITAEQ 347


>gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           AS9601]
 gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           AS9601]
          Length = 354

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 140/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRKELEQISAQPEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESQLGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I+G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIEGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG LD F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLDPFIHELLRM 345


>gi|62181551|ref|YP_217968.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205353965|ref|YP_002227766.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858304|ref|YP_002244955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224584830|ref|YP_002638628.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|62129184|gb|AAX66887.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205273746|emb|CAR38741.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206710107|emb|CAR34462.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224469357|gb|ACN47187.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322716032|gb|EFZ07603.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326629079|gb|EGE35422.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 293

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 170/292 (58%), Positives = 209/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MTQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGIKSATIKISGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 TKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
 gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
          Length = 366

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 139/354 (39%), Positives = 215/354 (60%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + ++  L    D +     L+ L  +  DP  W+   +A+ ++ E   + + ++  K  +
Sbjct: 13  AARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFR 72

Query: 64  DRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ D   ++EL  E    D ++  E ++ +  I   ++  +   LLSG  D   A + +
Sbjct: 73  AKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA MLLRMY RWA +  FK+  +E   GEEAGIKSATL I G  AYG++
Sbjct: 133 TAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYI 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGG 240
            GE+G HRLVR SP++S   R TSF+ + V P++++S IE+EI E D  I T R+ G GG
Sbjct: 193 SGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGG 252

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVR+THIPTG+ ++C +ERSQ +NK +A  +L++KL  +  ++R        
Sbjct: 253 QNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEEQRAAEIKEIR 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKDLRTN+E +  S ++DG+L+  + A L  K
Sbjct: 313 GDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSK 366


>gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 313

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 166/302 (54%), Positives = 216/302 (71%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  +  I ++   L D   LLELA  E D         +L   +  VE  +F+ + SG+
Sbjct: 2   LEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNYQAHVEKLEFQRMFSGQ 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ 
Sbjct: 62  MDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D
Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QK
Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R    +  E++K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 242 RNAEKDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|325109320|ref|YP_004270388.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
 gi|324969588|gb|ADY60366.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
          Length = 373

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 230/354 (64%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            L +++  L    D+D   +++  +N +   P  W N  +A+  M E + L + ++ ++E
Sbjct: 11  NLMKRILYLKDSLDYDVKCEQVKEINDRMAQPGFWDNQEKAQETMAELRRLKSLVTPLEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +LLE A  +D    +QE +    R+   V+  +F+ LL    D+ +AY+ +
Sbjct: 71  LVQGRDDLEVLLEFAEADDSEETVQEITSTCDRLGSIVDKVEFQLLLGQPEDALNAYVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GGT++ DWA MLLRMY RWAEK +  TE LE  D EEAGI+ ATLLIKG  A+G+L
Sbjct: 131 QAGEGGTDAADWAEMLLRMYIRWAEKEEMATELLERTDAEEAGIRHATLLIKGDYAFGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGG 240
           KGE G HRLVR+SP++S  +R T+F+++ V P VDDS EI+I  ++D   DT RA GAGG
Sbjct: 191 KGESGNHRLVRMSPFNSAGKRQTAFAAVDVTPEVDDSFEIDIDWDNDVDEDTMRAGGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVR+TH  +G+VV+CQ ERSQH+N+A A  ML AKLY++E++KRE       
Sbjct: 251 QHVNKTESAVRLTHKESGLVVRCQNERSQHQNRASARKMLTAKLYQMEIEKRESENAARR 310

Query: 301 SSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             K++IG+ G  IR+YVLQP Q VKD R+ ++  +P  VL+G+LD F++A L  
Sbjct: 311 GEKSKIGFGGETIRNYVLQPEQFVKDTRSELKTANPLTVLEGELDPFLEAYLKW 364


>gi|32033623|ref|ZP_00133934.1| COG1186: Protein chain release factor B [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207810|ref|YP_001053035.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           L20]
 gi|126096602|gb|ABN73430.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 301

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 157/299 (52%), Positives = 213/299 (71%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|239933740|ref|ZP_04690693.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 359

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 135/348 (38%), Positives = 198/348 (56%), Gaps = 2/348 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + ++ R+
Sbjct: 1   MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG    +   +
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-NPRDS 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           D  VRITH+PTG++     ERS+ +NK  A N+L+A+L      + E+        +   
Sbjct: 240 DFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLGRRR-QEEQAKMDALKDEGGN 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             G Q+RSY L PYQMVKDLRT  E  +P  V +G++D F++A +  +
Sbjct: 299 PCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 346


>gi|317495961|ref|ZP_07954323.1| peptide chain release 2 [Gemella moribillum M424]
 gi|316913865|gb|EFV35349.1| peptide chain release 2 [Gemella moribillum M424]
          Length = 372

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 219/351 (62%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++Q+         +   QR++ +     D   W +   A  L+ E + +   +     
Sbjct: 12  EVNKQITEFKTSLKIEEKEQRVAEIENMMLDADFWNDSETASTLVTESKSIKKELDEFSA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +EDD  I QE  + ++ +K +VE   F  L + E D+N A LE+
Sbjct: 72  MLDYLNHSEEMIEFLNDEDDEEIYQELIETVRDLKQQVEDFSFRLLFAEEYDNNTAILEI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DWA ++LRMY R+  K+      L    G+  G+KSATL I+G  AYG L
Sbjct: 132 HAGAGGTDATDWAEIMLRMYERFFSKQGLTYSYLNYQSGDITGVKSATLKIEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGG 240
           KGE+GVHR+VRISP+D + +RHTSF+SI V P   D    IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFSDEEANIEINIEDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KN+  A   L++KL++LEL+++E       
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNRDFAMKNLKSKLHQLELEEKERELASIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|304311879|ref|YP_003811477.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
 gi|301797612|emb|CBL45833.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
          Length = 300

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 164/298 (55%), Positives = 218/298 (73%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  +  RL     LL++ +EE+D S+L +    +  I+ +V   +F  + SGE D+N
Sbjct: 2   VGTIDSVSTRLRGARELLDMVVEENDESMLGDVQKEIDGIEADVAKMEFRRMFSGETDAN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             YL++ AG+GGTE+QDWA+MLLRMY RW E   FKTE +E+  GE AGIKSAT+ ++G 
Sbjct: 62  SCYLDIQAGSGGTEAQDWADMLLRMYLRWGEDHGFKTELVEVSAGEVAGIKSATIHLEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I IEI+ +D ++DTYRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIHIEINPADLKVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SA+RITH+P+G+VVQCQ +RSQHKN+ QA   LR+KLYE+E+QKR   
Sbjct: 182 SGAGGQHVNRTESAIRITHVPSGIVVQCQSDRSQHKNRDQAMKQLRSKLYEMEMQKRYVE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E SK +IGWG QIRSYVL     VKDLRTN+E ++   VLDG++D F+KA+L  
Sbjct: 242 KMRQEDSKMDIGWGSQIRSYVL-DQSRVKDLRTNVETSNTEAVLDGEIDLFIKASLKA 298


>gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
 gi|254790874|sp|B8I562|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
          Length = 359

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 126/349 (36%), Positives = 189/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD    A  R   ++ K  DP +  N  E K  M+E   L+  +   +E      +   
Sbjct: 1   MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESL--LSGEADSNDAYLEVHAGAGG 127
             EL  +  D    +      Q  + ++E   +Q + L       D  +  +E+  GAGG
Sbjct: 61  ARELLEQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L R   ++AEK+++K E L+ +  E  G K     I+G  AY  LK E GV
Sbjct: 121 EEAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P V + ++++I+ SD RIDTYRASGAGGQH+N TD
Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLPEV-EEVDVDINPSDLRIDTYRASGAGGQHINKTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SA+RITH+PTG+VV CQ ERSQHKNK +A  +LR+KLYE+  +++  E+A   ++     
Sbjct: 240 SAIRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLYEIAQEQQINEVAQDRKNQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       VLDGDLD+ + A +   +
Sbjct: 300 DRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQ 347


>gi|148549433|ref|YP_001269535.1| peptide chain release factor 2 [Pseudomonas putida F1]
 gi|148513491|gb|ABQ80351.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           putida F1]
          Length = 304

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 166/301 (55%), Positives = 219/301 (72%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++   L D   LL++A+EE+D + + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSGGLADCKDLLDMAVEENDENAVSDVVTELEGLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDQYLEASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|313500280|gb|ADR61646.1| PrfB [Pseudomonas putida BIRD-1]
          Length = 304

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 167/301 (55%), Positives = 219/301 (72%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D   + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELESLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDQYLEASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
 gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
          Length = 359

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 125/349 (35%), Positives = 190/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD    A  R   ++ K  DP +  N  E K  M+E   L+  +   +E      +   
Sbjct: 1   MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESL--LSGEADSNDAYLEVHAGAGG 127
             EL  +  D    +      Q  + ++E   +Q + L       D  +  +E+  GAGG
Sbjct: 61  ARELLDQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L R  T++AEK+++K E ++ +  E  G K     I+G  AY  LK E GV
Sbjct: 121 EEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P V + ++++I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLPEV-EEVDVDINPNDLRIDTYRASGAGGQHINKTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SA+RITH+P+G+VV CQ ERSQHKNK +A  +LR+KLYE+  +++  E+A   +S     
Sbjct: 240 SAIRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQINEVAQDRKSQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       VLDGDLD+ + A +   +
Sbjct: 300 DRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQ 347


>gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1]
 gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax
           citrulli AAC00-1]
          Length = 300

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 152/297 (51%), Positives = 208/297 (70%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L DN  L E++ EE D + L        +++  +E  +F  + S EAD  
Sbjct: 2   VVTLDKLTRELADNAELYEMSKEEGDEAGLLTIEAEAGKLRPLIEELEFRRMFSNEADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA MLLR Y ++AE++ FK    +   G+ AGIKSAT+ I+G 
Sbjct: 62  NCFVDIQAGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG L+ E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ +D R DT+RA
Sbjct: 122 YAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E 
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 297


>gi|74318511|ref|YP_316251.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
 gi|119361634|sp|Q3SG10|RF1_THIDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74058006|gb|AAZ98446.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
          Length = 360

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 125/341 (36%), Positives = 186/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +RL  L+     P +  ++   + L RE   L   +   ++ +    D     E+
Sbjct: 9   LARADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEADQKTAQEM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + + E +D   RI       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADADMRELAEAELADGAARITELENELQTALLPRDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++++K E +    GE  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GNLLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   +  E++I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+N+AQA ++L A+L + E+  + + A+   + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNRAQAMSVLAARLKDREI--QAQQASEASTRKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+DGDL + + A  A
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDAVMDGDLGELLDALAA 346


>gi|17545749|ref|NP_519151.1| peptide chain release factor 2 protein [Ralstonia solanacearum
           GMI1000]
 gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum GMI1000]
          Length = 300

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 160/297 (53%), Positives = 220/297 (74%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAVEADTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA+L ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 297


>gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1]
          Length = 368

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 222/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D     Q +  L+ +   P LW +V  A+ +     +    +  + ++
Sbjct: 12  LDTTLSSIEAVADVPRLRQEIEELSEQAGRPDLWDDVEAAQKITSRLAYAQGDLRRLDDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D + + +   +  R++ E+   +  +LLSGE D  +A + + 
Sbjct: 72  RRRLDDLPVLYELAEDEGDQAAVADADADRARLRSEIASLEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  E    EEAGIKSAT  +  P A+G L 
Sbjct: 132 SEAGGIDAADFAEMLLRMYLRWAERHGYGTDVFETSYAEEAGIKSATFAVHAPYAFGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E D R+D +RASG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESSDHVEIDEKDLRVDVFRASGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL  L+ +++EE   +    
Sbjct: 252 VNTTDSAVRLTHIPTGIVVACQNERSQLQNKASAMVVLQAKL--LDRRRQEERELMDSFK 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+R+YVL PYQ+VKDLRT  E+ +PS VLDG++DDF++A +  ++
Sbjct: 310 DSGSSWGNQMRNYVLHPYQLVKDLRTEHEEGNPSQVLDGEIDDFIEAGIRWRR 362


>gi|283850198|ref|ZP_06367487.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
 gi|283574224|gb|EFC22195.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
          Length = 314

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 145/311 (46%), Positives = 208/311 (66%), Gaps = 1/311 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           ++RE+  L   ++  +++     D    + LA +++   IL   ++ +  +  E+   + 
Sbjct: 4   ILREKSVLTAKVTGGEKLLAAKADLDEWMSLAKDDNSPEILDALAEQIVSLGSELADAEL 63

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            +   G  D+ DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F  + L+   G+EAG
Sbjct: 64  AAFF-GPEDNADAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKQFGIKVLDFLPGDEAG 122

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KS TL I GP AYG L  E+G+HRL+RISP+DS+ RRHTSF+S+ VYP     I+I++ 
Sbjct: 123 VKSVTLQISGPYAYGLLDAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGLDIDIDVK 182

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E D R+D +RASG GGQHVN T SA+RITH+PTG+VVQCQ E+SQH+N+  A  +L+A+L
Sbjct: 183 EEDLRVDVFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRESAMKVLKARL 242

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           Y+LEL+K +        SK  IG+G QIR+Y +QPYQ+VKD RT +E      V+DG+LD
Sbjct: 243 YDLELKKIQAEKQENYDSKNAIGFGSQIRTYTMQPYQLVKDHRTGVEVGDVGAVMDGELD 302

Query: 345 DFMKATLAIKK 355
            F++  L   +
Sbjct: 303 KFIRGYLLAGR 313


>gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa]
 gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa]
          Length = 379

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 218/354 (61%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S+++  +          Q L+ L +K  D  LW +  +A+  +     + + I  + E +
Sbjct: 15  SQRVEEMRASSGLHLLEQELADLESKAADSSLWDDRAKAQETLLALTDVKDKIKLLAEFK 74

Query: 64  DRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ +   +++L  E D  D   L+E +  ++ +   ++  +   LLSG  D   A L +
Sbjct: 75  TKVEEAETIVKLTEEMDSTDAGFLEEATGIIKELNKALDKYELTQLLSGPYDKEGAVLSI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E   GEEAGIKSAT+ ++G  AYG+L
Sbjct: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTKVVESSPGEEAGIKSATVEVEGRYAYGYL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P+  ++S+++E+ E D  I T RA G GG
Sbjct: 195 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGG 254

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R        
Sbjct: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIR 314

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIASVMDGELDPFIRAYLKHK 368


>gi|21282445|ref|NP_645533.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|88194533|ref|YP_499328.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|161509023|ref|YP_001574682.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|21203882|dbj|BAB94581.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|87202091|gb|ABD29901.1| peptide chain release factor 2, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|160367832|gb|ABX28803.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 291

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 151/280 (53%), Positives = 196/280 (70%), Gaps = 1/280 (0%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDW
Sbjct: 6   DLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDW 65

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           ANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI
Sbjct: 66  ANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 125

Query: 194 SPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+DS+ RRHTSF+S  V P  + D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RI
Sbjct: 126 SPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRI 185

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          + EIGWG QI
Sbjct: 186 THHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQI 245

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYV  PY MVKD RTN E      V+DGD+  F+++ L 
Sbjct: 246 RSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 285


>gi|300692007|ref|YP_003753002.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
 gi|299079067|emb|CBJ51729.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
          Length = 300

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 158/297 (53%), Positives = 220/297 (74%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLNGGAELFELAREEGDDDTVEAVEADTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDTFIEASLK 297


>gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CMR15]
          Length = 300

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 160/297 (53%), Positives = 220/297 (74%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAVETDTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA+L ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 297


>gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|207725248|ref|YP_002255644.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
 gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
          Length = 300

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 158/297 (53%), Positives = 219/297 (73%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAIEADTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSA++ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIQASLK 297


>gi|27363990|ref|NP_759518.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37678852|ref|NP_933461.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|320157369|ref|YP_004189748.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
 gi|27360107|gb|AAO09045.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37197593|dbj|BAC93432.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|319932681|gb|ADV87545.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
          Length = 289

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 160/287 (55%), Positives = 210/287 (73%), Gaps = 1/287 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E +D     E    L+ ++ ++   +F  + SG  DS+D Y+++ AG+
Sbjct: 1   MDDVEGLLELAIEAEDQETFDEIGPELEALEEKLAGLEFRRMFSGAHDSSDCYIDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW +M+LRMY RWAE + FKTE +E+ +G+ AG+KS T+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGDVAGLKSVTVRIIGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSF+S +VYP +D++I+I+I+ +D RID YRASGAGGQHVNT
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFVYPEIDENIDIDINPADLRIDVYRASGAGGQHVNT 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++
Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLK 286


>gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 362

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 189/344 (54%), Gaps = 7/344 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +   +R   +     DP +  +  + + L +E   L+      +  +    D    
Sbjct: 6   LVKLETLEERYEEVQHLLGDPSVISDQDKFRSLSKEYSQLEEVTKCFQAYKQAQDDLAAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGT 128
            E+A  EDD  + +   + ++  K E+E  +   + LL      D  + +LE+ AGAGG 
Sbjct: 66  EEMA-NEDDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE+R ++ E +  +D E  G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI+ SD +IDTYR+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR  E A+   +      
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   V D R  +     ++V++GD+D  ++  L
Sbjct: 305 RSDRIRTYNY-PQGRVSDHRITLTIYRLNEVMEGDVDCLIQPVL 347


>gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus]
          Length = 789

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 129/356 (36%), Positives = 200/356 (56%), Gaps = 7/356 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L     LFD       L +L   + +   W +   A+  + +   L   +  +   +
Sbjct: 98  RERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWR 157

Query: 64  DRLCDNLILLELALEEDDC-----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
               D   ++EL  EE+       ++L E  + LQ ++ +++  + + LLSG+ D+    
Sbjct: 158 GWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCR 217

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L + AGAGGTE+QDWA ML RMY R+ ++R FK + +E   GE AGIKS  + ++G  AY
Sbjct: 218 LTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAY 277

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRIDTYRAS 236
           G+L GE+G HRLVR SP+++ ++R TSF+ +  +     DD  ++ + E +  + T R+ 
Sbjct: 278 GYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSG 337

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+GGQ+VN  ++ VR+ HIPTG+ V+C QERSQ  NK  A NML+ KL  +  +++    
Sbjct: 338 GSGGQNVNKVETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDL 397

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                   E  WG+QIR+YV  PY++VKD RT  E     DV+DGDLD  ++A L 
Sbjct: 398 AEIRGDMVEASWGQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDGDLDALIEAYLR 453


>gi|283835350|ref|ZP_06355091.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
 gi|291068515|gb|EFE06624.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
          Length = 293

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 168/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MSQGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|237740205|ref|ZP_04570686.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|262068161|ref|ZP_06027773.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294782698|ref|ZP_06748024.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
 gi|229422222|gb|EEO37269.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|291378140|gb|EFE85658.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294481339|gb|EFG29114.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
          Length = 308

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 154/303 (50%), Positives = 211/303 (69%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++   E  + S   E  +  + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEVEDEEVLIDFV-ESGESSFENELIEKHKTLKYDIEEFEVNLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDD++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDNVEVEINPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH PTGVVV CQ+ERSQ  N+  A  ML++KL E+EL+K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPTGVVVTCQKERSQLSNRETAMKMLKSKLLEIELKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +T+IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQTDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9215]
 gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9215]
          Length = 354

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 139/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRM 345


>gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
 gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
          Length = 420

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 130/404 (32%), Positives = 200/404 (49%), Gaps = 52/404 (12%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +++L+ +      D    +++ L  +      W +   A   M    +L    + +++  
Sbjct: 13  TQRLSDVERALQLDTMQTKIAELEAECAKEDFWGDPARASKTMATLTNLKQTQATMRDAH 72

Query: 64  DRLCDNL-----ILLEL-----------------ALEED--------------------- 80
             L D +      L E+                 A   +                     
Sbjct: 73  ALLDDLVVAYEFALDEMQNAALPVSGLDISHPHDAAASEATTSGEARSISHIPAASDAAS 132

Query: 81  --------DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                      +++E     + +   ++  +         D  DA + +  G GG E+QD
Sbjct: 133 PADTAAQAQSDMMREAQHTYKTLTGLLDELELNRWFCDPYDQGDAIVTIKPGQGGLEAQD 192

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  MLL+MY ++ E++ ++    +    E  GI  AT  + G  AYG LK E GVHRLVR
Sbjct: 193 WCAMLLKMYCKYCERKSWRVTINDCPQAEVIGIDRATFTVHGVRAYGMLKAEAGVHRLVR 252

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP D+  RR T+F+ + V PV+ +  ++EI+  D R+D + ASG GGQ VNTTDSAVR+
Sbjct: 253 ISPTDAKHRRQTTFAGVEVIPVLPEETDVEINPQDVRVDVFHASGPGGQGVNTTDSAVRL 312

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+P+G+VV CQ ERSQ +NKA A  +L+A+LYEL+ Q+R    N  +   T I WG QI
Sbjct: 313 THMPSGIVVSCQNERSQLQNKAAAMEILKARLYELQRQQRATQLNDLKGLTTTISWGNQI 372

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           R+Y+L P+Q+VKD RT +E  +   VL +G+LD F+ A L  K+
Sbjct: 373 RNYILYPFQLVKDTRTQVETGNVDAVLQEGNLDPFIIAYLRWKQ 416


>gi|317063162|ref|ZP_07927647.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
 gi|313688838|gb|EFS25673.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 328

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 150/327 (45%), Positives = 218/327 (66%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
            T + + W +   +  +++E       ++  K+++  + +  +L++   E  +     E 
Sbjct: 1   MTMEENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFV-EMGEADFQTEL 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +    +  ++++     LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++
Sbjct: 60  EEKHMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+K   ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S
Sbjct: 120 KYKISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD+S+E+ I   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERS
Sbjct: 180 VEVMPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q  N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT
Sbjct: 240 QLNNRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + E  +   V+DGD+D F+   L   K
Sbjct: 300 SAESGNIKAVMDGDIDIFINTYLRWNK 326


>gi|19704676|ref|NP_604238.1| peptide chain release factor 2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296328111|ref|ZP_06870644.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|19714986|gb|AAL95537.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154782|gb|EFG95566.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 308

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 151/303 (49%), Positives = 211/303 (69%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++   E  + S   E S+  + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFV-ESGETSFESELSEKHKNLKTDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+  D RIDT
Sbjct: 124 EGINAYGYLKSEKGIHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPVDIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELEL+K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DGD+D F+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGDIDGFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|313204692|ref|YP_004043349.1| bacterial peptide chain release factor 2 (brf-2) [Paludibacter
           propionicigenes WB4]
 gi|312444008|gb|ADQ80364.1| bacterial peptide chain release factor 2 (bRF-2) [Paludibacter
           propionicigenes WB4]
          Length = 368

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 133/356 (37%), Positives = 213/356 (59%), Gaps = 11/356 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            + + L    D D  + ++     +T+ P  W +   A+  MR+ + L N ++    ++ 
Sbjct: 12  ERESALRRYLDVDTKLIQIEEEELRTQVPGFWDDAKAAEAQMRKVKELKNWVTGYNAVKT 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +   EE      +E  +  +     +E  + +++LS E D   A +++  G
Sbjct: 72  AADELQLAFDFYKEEAVSE--EEVDEAYRHAMELLENIEMKNMLSHEEDKLGAVIKIVGG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA+ML RMY RW E++ +  E   + +G+EAGIK+ T+ I+G  AYG+LK E
Sbjct: 130 AGGTEAQDWASMLFRMYQRWCERQGYACEITNLQEGDEAGIKTVTMQIEGEMAYGYLKSE 189

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+++  +R TSF+S++V P+VDD+IEIE++      DT+R+SGAGGQ+VN
Sbjct: 190 NGVHRLVRVSPFNAQGKRMTSFTSVYVVPLVDDTIEIEVNPGMLSWDTFRSSGAGGQNVN 249

Query: 245 TTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++ VR+ +         P  +V++  + RSQ  NK  A  +L+++LYELEL+KR    
Sbjct: 250 KVETGVRLHYKFVNPVTNQPDEIVIENTESRSQFGNKDNAIRLLKSQLYELELEKRRAAT 309

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            + E+ K +I WG QIRSYV    + VKD RTN + ++ + V+DGD+D F+KA L 
Sbjct: 310 AVVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNGVMDGDIDAFIKAYLM 364


>gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
 gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
          Length = 300

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 158/297 (53%), Positives = 219/297 (73%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAIETDTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSA++ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIQASLK 297


>gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693241|sp|B4RSV6|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 361

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 188/341 (55%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L++ ++     Q    +     E+
Sbjct: 9   LEHLVERFEEVQALLGDPEVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQENLASAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  + +   + ++  K E+E  + E     L     D N+ +LE+ AGAGG E+ 
Sbjct: 69  -LNEDDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R ++ E +  ++ E  G K     + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S  IEI+ ++ RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E +KR         S    G    
Sbjct: 248 ITHLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++GDL   +   L
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLVDPIL 347


>gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
 gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
          Length = 300

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 153/297 (51%), Positives = 212/297 (71%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L DN  L E++ EE D + L        +++ E+E  +F  + S EAD  
Sbjct: 2   VLTLDKLTRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPEIEQLEFRRMFSNEADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FKT   E   G+ AGIKSAT+ ++G 
Sbjct: 62  NCFVDIQAGAGGTEACDWASMLLRQYLKYAERKGFKTTVEEETAGDVAGIKSATIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG L+ E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSI+I+I+ +D R DTYRA
Sbjct: 122 YAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E 
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHEMRKRQEE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +KT++GWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L 
Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVL-DNSRIKDLRTGVEISATQKVLDGDLDAFIEASLK 297


>gi|30961857|gb|AAP40012.1| peptide chain release factor-2 [Citrobacter freundii]
          Length = 293

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 168/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MSQGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 TKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
          Length = 354

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 139/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMTLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRM 345


>gi|330828582|ref|YP_004391534.1| peptide chain release factor 2 [Aeromonas veronii B565]
 gi|328803718|gb|AEB48917.1| Peptide chain release factor 2 [Aeromonas veronii B565]
          Length = 300

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 155/297 (52%), Positives = 209/297 (70%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  +   + D  +L+ LA+E +D     E     ++++ ++   +F  + SG+ D +
Sbjct: 2   VGTIDTLTQGVDDVEMLVSLAVEGEDEETFNEAIAESEQLEAKLVDLEFRRMFSGQHDGS 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ +G+GGTE+QDWANM+LRMY RW +   +K E +E  +G+ AGIKSAT+   G 
Sbjct: 62  DCYIDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITH+PTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+   
Sbjct: 182 SGAGGQHVNRTESAVRITHVPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 242 KQALEETKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLK 297


>gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|20139356|sp|Q9KQ25|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047628|sp|A5F696|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790906|sp|C3LPI4|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3894-4]
          Length = 362

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 188/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G  
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GD+   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVI 347


>gi|254456112|ref|ZP_05069541.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083114|gb|EDZ60540.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 326

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 175/322 (54%), Positives = 243/322 (75%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             + + WQ+   +K +++E++  ++ ++  K   ++L D   + ELA EE++ ++ +E  
Sbjct: 1   MLEANFWQDKNNSKNIIKEKKLYEDLLNIHKASIEKLIDLNDISELAAEEENQAVQKEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            N++ ++  V+  + +  LS E DS D Y+E+HAGAGGTESQDWA ML RMY +WA+++ 
Sbjct: 61  QNIKDLRDLVKTNEIKCFLSNETDSLDCYIEIHAGAGGTESQDWAEMLRRMYLKWADQKN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK+  +  H G+EAGIKS+T+ I+G   +GWLK E G+HRLVRISP+DS +RRHTSF+SI
Sbjct: 121 FKSNLISEHKGDEAGIKSSTIKIEGDYVFGWLKKESGIHRLVRISPFDSGARRHTSFASI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           WVYPVVD++I IEI E D RIDTYR+SGAGGQHVNTTDSAVRITHIP+ +VVQCQ ERSQ
Sbjct: 181 WVYPVVDENINIEIIEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPSKIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK    NML+A+LY+ E++K+E+     E+SK+EIGWG QIRSYVLQPY++VKD RTN
Sbjct: 241 HKNKETCINMLKARLYDYEIKKKEQKNQNTENSKSEIGWGHQIRSYVLQPYRLVKDNRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E T+P  +LDG++D F++ +L
Sbjct: 301 FESTNPDKILDGEIDGFLEQSL 322


>gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
 gi|32171537|sp|Q8DFF9|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576703|sp|Q7MMY6|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
          Length = 362

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 120/343 (34%), Positives = 187/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+         +    D +   E+
Sbjct: 9   LEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K+ +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AKE-DDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG+LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     S+V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVI 347


>gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
 gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
          Length = 362

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 190/346 (54%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +  
Sbjct: 6   LVKLESLVERYEEVQHLLGDPAVIGDQNKFRSLSKEYSQLEEVTKCFQAYQQAQEDFVAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGT 128
            E+  E DD  + +   D ++  K E+E      Q   L     D  + +LE+ AGAGG 
Sbjct: 66  EEMTKE-DDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKR--AAEISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 303 GDRSDRIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDLQALIDPVV 347


>gi|238921196|ref|YP_002934711.1| peptide chain release factor 2, [Edwardsiella ictaluri 93-146]
 gi|238870765|gb|ACR70476.1| peptide chain release factor 2, putative [Edwardsiella ictaluri
           93-146]
 gi|304560096|gb|ADM42760.1| Peptide chain release factor 2 [Edwardsiella tarda FL6-60]
          Length = 293

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 211/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  + +++   +F  + SGE DS D YL++
Sbjct: 1   MHQGLEDVSGLLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 TKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|313672261|ref|YP_004050372.1| bacterial peptide chain release factor 1 (brf-1) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 356

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 191/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  +++ + L  K  DP++  ++   + L +E   L   +    E +D       
Sbjct: 1   MFDHLEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSIKE 60

Query: 72  LLELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  +  D  +++     L    ++++   E  +   L     D  + Y+E+ AG GG
Sbjct: 61  AEAILKDGGDKDLIELAEIELAEGKEKLEKISEELKILLLPKDPFDEKNIYIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  LLRMY R+AEK  +KTE ++ ++    G K   LL+KG NAY  LK E G 
Sbjct: 121 EESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYSKLKYEAGG 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S+ R HTS  ++ V P   D +++ I   D RID YR+SGAGGQHVNTTD
Sbjct: 181 HRVQRIPETESSGRIHTSACTVAVIPEA-DDVDVHIDPKDLRIDVYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVRITHIPTG+VV CQ ERSQ KNK +A  +L++K++E+EL+++  E A   +      
Sbjct: 240 SAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQAENRKQQVGSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R N+   +   V++G+LD+ + A +   +
Sbjct: 300 DRSERIRTYNF-PQNRLTDHRINLTVYNLDMVMEGELDEIIDALITYDQ 347


>gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016]
 gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
 gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016]
 gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
          Length = 363

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 120/343 (34%), Positives = 187/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+         +    D +   E+
Sbjct: 10  LEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQEDLVAAEEM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K+ +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 70  AKE-DDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG+LK E G HR+ 
Sbjct: 129 IFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 189 RVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR   A + ++ +  +G G  
Sbjct: 249 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKR--AAEVSDTRRNLLGSGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     S+V++GDL   +   +
Sbjct: 307 SDRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVI 348


>gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
 gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
          Length = 299

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 156/295 (52%), Positives = 211/295 (71%), Gaps = 1/295 (0%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            ++++   L DN+ L E++ EE D + L+       ++K  +E  +F  +  GEAD  + 
Sbjct: 3   TLEKLTTELADNVELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNC 62

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ ++G  A
Sbjct: 63  FIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYA 122

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ SD R DTYRASG
Sbjct: 123 YGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASG 182

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E   
Sbjct: 183 AGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQ 242

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 243 KLEDTKTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 296


>gi|325280722|ref|YP_004253264.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
 gi|324312531|gb|ADY33084.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
          Length = 370

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 140/357 (39%), Positives = 212/357 (59%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D D     L  +  +T+ P  W +  +A+ +M++ + L   I   + + 
Sbjct: 11  EERSGALRRYLDIDRKKIELEEVEMRTQAPDFWNDAKQAEKVMKQVRELKGWIEGCEAVS 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D  +L + A E +  +  +E   +       VE  + +++L GEAD     L++++
Sbjct: 71  RSVDDLNVLFDFAKEGE--ATEEEVDTHYAETLQLVEELELKNMLRGEADQMSCILKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY RWAE   +K     I +G+EAGIK+ TL ++G  AYG+LKG
Sbjct: 129 GAGGTESQDWASMLMRMYMRWAEANNYKLTVSNIQEGDEAGIKTVTLQLEGDFAYGYLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDDSIEI I+ +D   DT+R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDSIEIAINAADISWDTFRSGGAGGQNV 248

Query: 244 NTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  ++ VR+ +      TG      ++  + RSQ  N+  A  +LR+ LY++ELQ+R   
Sbjct: 249 NKVETGVRLRYNYKDPDTGETREILIENTETRSQLDNRENAMRLLRSMLYDMELQRRMAE 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               ES+K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 309 QQKIESNKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVGGVMDGKIDGFIKAYLM 364


>gi|165975783|ref|YP_001651376.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875884|gb|ABY68932.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 301

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 156/299 (52%), Positives = 212/299 (70%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRALDQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+ +VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSSIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|257468914|ref|ZP_05633008.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 326

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 149/324 (45%), Positives = 217/324 (66%), Gaps = 1/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           + + W +   +  +++E       ++  K+++  + +  +L++   E  +     E  + 
Sbjct: 2   EENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFV-EMGEADFQTELEEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
              +  ++++     LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++K+K
Sbjct: 61  HMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKKYK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+ V
Sbjct: 121 ISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VD+S+E+ I   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ  
Sbjct: 181 MPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQLN 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT+ E
Sbjct: 241 NRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTSAE 300

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   V+DGD+D F+   L   K
Sbjct: 301 SGNIKAVMDGDIDIFINTYLRWNK 324


>gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 313

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 164/302 (54%), Positives = 216/302 (71%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  +  I ++   L D   LL+LA  E D         +L + +  VE  +F+ + SG+
Sbjct: 2   LEKTVIGIADVLAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQ 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ 
Sbjct: 62  MDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D
Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QK
Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R    +  E++K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 242 RNVERDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|294785988|ref|ZP_06751275.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
 gi|294486325|gb|EFG33688.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
          Length = 308

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 150/303 (49%), Positives = 210/303 (69%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++   E  + S   E     + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFV-ESGEASFENELQTKHKILKSDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPTDIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
 gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
          Length = 308

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 162/295 (54%), Positives = 212/295 (71%), Gaps = 1/295 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           I  + D L D   LLELA  E D         +L + +  VE  +F+ + SGE D+  A+
Sbjct: 4   IASVLDGLTDATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAF 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ AGAGGTE+QDWA +LLRMY RW E R +KTE +E+  G+ AGIKSATL ++G  AY
Sbjct: 64  VDIQAGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           GWLK E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGA
Sbjct: 124 GWLKTETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGA 183

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITHIPT +VV CQ  RSQH+N+  A  ML AKLYELE+QKR    + 
Sbjct: 184 GGQHVNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDA 243

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            E++K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 244 VEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 297


>gi|168185914|ref|ZP_02620549.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
 gi|169296113|gb|EDS78246.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
          Length = 357

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    +   
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHSELETIVTKYREYKGNKEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  EE D  + +   + ++ ++  +    E  +   L     D  + ++E+ AGAGG
Sbjct: 61  NKEMLSEETDKDMKEMIQEEIKTLEENIVTDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V D ++I+I  +D R+D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLPEV-DDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LY  E  + E  A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLY--EKAEAERSASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQ 347


>gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
          Length = 362

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 126/346 (36%), Positives = 190/346 (54%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D    
Sbjct: 6   LVKLESLVERYEEVQHLLGDPAVIGDQDKFRALSKEYSQLEEITHCFQAYQQAQDDLSAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGT 128
            E+A E DD  + +   D ++  K E+E      Q   L     D  + +LE+ AGAGG 
Sbjct: 66  EEMAKE-DDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AEKR ++ E +  ++ E  G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V   V ++   EI  +D +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEKR--AAAISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     S+V++GDL   +   +
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTVYRLSEVMEGDLQSLVDPVI 347


>gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 305

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 161/295 (54%), Positives = 211/295 (71%), Gaps = 1/295 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           YELE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E       L
Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVEIQILVRFL 294


>gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
 gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
          Length = 299

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 156/295 (52%), Positives = 210/295 (71%), Gaps = 1/295 (0%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            ++++   L DN  L E++ EE D + L+       ++K  +E  +F  +  GEAD  + 
Sbjct: 3   TLEKLTTELADNSELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNC 62

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ ++G  A
Sbjct: 63  FIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYA 122

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ SD R DTYRASG
Sbjct: 123 YGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASG 182

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E   
Sbjct: 183 AGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQ 242

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 243 KLEDTKTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 296


>gi|253681032|ref|ZP_04861835.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
 gi|253562881|gb|EES92327.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
          Length = 357

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 197/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D    +   L+ K  DP +  N  E + L +E   L+  ++  +E ++   +   
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELES 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  EE+D  + +   + ++ ++     + E  +   L     D  + ++E+ AGAGG
Sbjct: 61  NKELLSEENDRDMKEMIQEEIKTLEENIVRDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSTNETDIGGFKEVVFMLRGDSAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V D ++I+I  +D R+D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLPEV-DDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LY  E  + E  A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLY--EKAEAERAASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALITAEQ 347


>gi|283457761|ref|YP_003362349.1| protein chain release factor B [Rothia mucilaginosa DY-18]
 gi|283133764|dbj|BAI64529.1| protein chain release factor B [Rothia mucilaginosa DY-18]
          Length = 421

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 139/356 (39%), Positives = 220/356 (61%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +   + +  L+ +   P LW +V  A+ +     +  + ++ ++ 
Sbjct: 58  ELRAIFTSIAAVSDIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRS 117

Query: 62  IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  R+ D  +++ELA  ED+ +   +L +       I+ ++E  +   LLSGE D  +A 
Sbjct: 118 LSSRIDDVEVMVELAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAV 177

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  +  P A+
Sbjct: 178 VTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAF 237

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG 
Sbjct: 238 GRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGP 297

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L  +++E+    
Sbjct: 298 GGQSVNTTDSAVRMTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLL-RKEQEDAKKK 356

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +   +  WG Q+RSYVL PYQMVKDLRT  E+ + S+VLDG L+ F+ A +  +
Sbjct: 357 ELAGDIKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWR 412


>gi|296158326|ref|ZP_06841157.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
 gi|295891270|gb|EFG71057.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
          Length = 280

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 158/278 (56%), Positives = 211/278 (75%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE D + L     + Q I+  V   +F  + S  AD N+A+L++ AGAGGTE+ DWA
Sbjct: 1   MAREEGDEATLLACESDAQGIEQRVADMEFRRMFSNPADPNNAFLDIQAGAGGTEACDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR S
Sbjct: 61  AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 121 PFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ KT++GWG QIRS
Sbjct: 181 MPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 241 YVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 277


>gi|126701107|ref|YP_001090004.1| peptide chain release factor 1 [Clostridium difficile 630]
 gi|254977108|ref|ZP_05273580.1| peptide chain release factor 1 [Clostridium difficile QCD-66c26]
 gi|255094436|ref|ZP_05323914.1| peptide chain release factor 1 [Clostridium difficile CIP 107932]
 gi|255102693|ref|ZP_05331670.1| peptide chain release factor 1 [Clostridium difficile QCD-63q42]
 gi|255308514|ref|ZP_05352685.1| peptide chain release factor 1 [Clostridium difficile ATCC 43255]
 gi|255316188|ref|ZP_05357771.1| peptide chain release factor 1 [Clostridium difficile QCD-76w55]
 gi|255518849|ref|ZP_05386525.1| peptide chain release factor 1 [Clostridium difficile QCD-97b34]
 gi|255652028|ref|ZP_05398930.1| peptide chain release factor 1 [Clostridium difficile QCD-37x79]
 gi|255657438|ref|ZP_05402847.1| peptide chain release factor 1 [Clostridium difficile QCD-23m63]
 gi|260685003|ref|YP_003216288.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296449035|ref|ZP_06890825.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296879858|ref|ZP_06903831.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
 gi|306521770|ref|ZP_07408117.1| peptide chain release factor 1 [Clostridium difficile QCD-32g58]
 gi|119361524|sp|Q180Y2|RF1_CLOD6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115252544|emb|CAJ70387.1| Peptide chain release factor 1 (RF-1) [Clostridium difficile]
 gi|260211166|emb|CBA66621.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260214678|emb|CBE07314.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296262128|gb|EFH08933.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296429147|gb|EFH15021.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
          Length = 354

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +        L+ K  DP +  +    +  ++E   L+  +   +E +  L       E+
Sbjct: 5   LEVLEDTYKDLSEKIGDPDVINDQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKESKEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     L  ++ +V    E  +   L     D  +  +E+  GAGG E+ 
Sbjct: 65  LQEESDEELRELAKMELAEMEEKVAPLEEEIKILLLPKDPNDDKNVIVEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE+R++K E L   D    G K  + +IKG  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS S++ V P V + +E+EI+ +D RID +R+SG GGQ VNTTDSAVR
Sbjct: 185 RIPSTESGGRIHTSTSTVAVLPEV-EDVEVEINPNDLRIDVFRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG VV CQ  +SQ KNK QA  +L+A+LY+  L   E+  +I    K+++G G  
Sbjct: 244 VTHIPTGEVVSCQDGKSQLKNKEQALKILKARLYDKAL--AEQHKDIAAERKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+        LDGD+D+ + A + + +
Sbjct: 302 SERIRTYNF-PQGRISDHRINLTLYKLDAFLDGDIDEMIDALITVDQ 347


>gi|83814103|ref|YP_445897.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
 gi|83755497|gb|ABC43610.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
          Length = 378

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 154/357 (43%), Positives = 224/357 (62%), Gaps = 8/357 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  LGG  D D     +  LN +  DP  W +   A+ + +     +  I   ++
Sbjct: 11  QLAERVEALGGYLDVDGRRMTVEELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWED 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++  D   L +L  EE+   +  E     ++++ +++  + ESLL    D  DA +E+
Sbjct: 71  VKEQAEDIETL-QLLSEEEGEDMSDEIDAEARKLEQKLDRLELESLLDDPDDERDAIVEI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + GAGGTESQDWA MLLRMY RWAE + +  E +    GEEAGIKSATL ++G +AYG L
Sbjct: 130 NPGAGGTESQDWAEMLLRMYMRWAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D++SRRHTSF+S++VYP VDDSI +++SE +  + T+R+ G GGQ
Sbjct: 190 KSETGVHRLVRISPFDADSRRHTSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQ 249

Query: 242 HVNTTDSAVRITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           HVN  ++ VR+           T V   C QERSQH+N+ +A  ML++++Y+ E + +EE
Sbjct: 250 HVNKVETGVRLIWTGTLSNGEETTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEE 309

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                ESSK  I WG QIRSYVL PY+MV D RT+ ++     VL+G+LD F+KA L
Sbjct: 310 EKERLESSKKSIEWGSQIRSYVLHPYKMVNDHRTDTKRNDAEAVLEGELDPFIKAYL 366


>gi|34762942|ref|ZP_00143922.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887403|gb|EAA24493.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 308

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 151/303 (49%), Positives = 210/303 (69%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++   E  + S   E     + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFV-ESGEASFENELQTKHKILKSDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  GIKS T L+
Sbjct: 64  DINNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGIKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341]
 gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341]
          Length = 362

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 189/343 (55%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G  
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GD+   ++  +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
 gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
          Length = 362

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+   +  +  Q    D +   ++
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTNCFQAYQQAQDDLIAAEDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDEEMREMAQEEIKEAKDAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVV 347


>gi|294634840|ref|ZP_06713362.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
 gi|291091713|gb|EFE24274.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
          Length = 293

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 213/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L ++++++   +F  + SGE DS D YL++
Sbjct: 1   MHQGLEDVSGLLELAVEADDEETFDEAVAELDQLEVKLGQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEVQKKNAERQQMEE 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|153956299|ref|YP_001397064.1| peptide chain release factor 1 [Clostridium kluyveri DSM 555]
 gi|189039965|sp|A5N3J7|RF1_CLOK5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146349157|gb|EDK35693.1| PrfA [Clostridium kluyveri DSM 555]
          Length = 357

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  +  + + L +E   L+  +   +E ++ L D     E+  E
Sbjct: 8   IENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDNKEMLRE 67

Query: 79  EDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++R+    +   +  +   L     D  + ++E+  GAGG E+  +A
Sbjct: 68  ETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE + +K E + +   +  G K    ++KG +AY  LK E G HR+ R+ 
Sbjct: 128 ANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I ++++D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDIVVNQNDIRIDVFRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV CQ E+SQ KNK +A  +L+++LY  E  + E  A+I E  K ++G G    +
Sbjct: 247 LPTGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EKAQEERNASIAEDRKNQVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +        L+GD+D+ + A +   +
Sbjct: 305 IRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQ 347


>gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
          Length = 362

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 185/343 (53%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AKE-DDEEMREMAQEEIKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVV 347


>gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223]
 gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223]
          Length = 362

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 122/343 (35%), Positives = 189/343 (55%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P V ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G  
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GD+   ++  +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|114569849|ref|YP_756529.1| peptide chain release factor 2 [Maricaulis maris MCS10]
 gi|114340311|gb|ABI65591.1| bacterial peptide chain release factor 2 (bRF-2) [Maricaulis maris
           MCS10]
          Length = 321

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 189/313 (60%), Positives = 237/313 (75%), Gaps = 4/313 (1%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L+ AI+ + E +    D+L ++ELA  EDD  +++E    L  +   +   Q E
Sbjct: 1   MRERNRLEAAITTVVEAEQEYSDSLEIIELAEMEDDAEMVEEAVAGLNALAERMRRAQLE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD NDA++E+H+GAGGTESQDWA ML RMY+RWA    +K E +E   GEEAG+
Sbjct: 61  TLLSGEADGNDAFVEIHSGAGGTESQDWAAMLARMYSRWANAHGYKVETMEEQAGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+L+KG NAYGWLK E GVHRLVRISP+DS++RRHTSFSS+ VYP +DD+I+++I  
Sbjct: 121 KSTTILVKGENAYGWLKTEAGVHRLVRISPFDSSARRHTSFSSVGVYPQIDDAIDVDIDV 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV----VVQCQQERSQHKNKAQAWNMLR 281
           S  R DTYRASGAGGQH+N TDSAVR+T+   G     VVQCQ +RSQHKN++QAW+MLR
Sbjct: 181 SKVRTDTYRASGAGGQHINKTDSAVRLTYDMPGEEKPVVVQCQNDRSQHKNRSQAWDMLR 240

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           A++YE+ELQ+RE  A     SK+EIGWG QIRSYVLQPYQMVKDLRTN+E ++   VLDG
Sbjct: 241 ARVYEIELQRREAAAQAEADSKSEIGWGHQIRSYVLQPYQMVKDLRTNVETSNTGGVLDG 300

Query: 342 DLDDFMKATLAIK 354
           DLDDFM A LA +
Sbjct: 301 DLDDFMAAALAAR 313


>gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
 gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
          Length = 362

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 189/343 (55%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G  
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GD+   ++  +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|332381658|gb|AEE66505.1| peptide chain release factor 2 [Bordetella pertussis CS]
          Length = 293

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 154/289 (53%), Positives = 215/289 (74%), Gaps = 1/289 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D+  L+ELAL + D + L+    +  R + ++E  +F  + +  AD  + ++++ A
Sbjct: 3   SGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ 
Sbjct: 63  GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+
Sbjct: 123 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SK
Sbjct: 183 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 243 TDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 290


>gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25]
          Length = 362

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 120/343 (34%), Positives = 186/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L RE   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSREYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVI 347


>gi|219856616|ref|YP_002473738.1| hypothetical protein CKR_3273 [Clostridium kluyveri NBRC 12016]
 gi|219570340|dbj|BAH08324.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 367

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  +  + + L +E   L+  +   +E ++ L D     E+  E
Sbjct: 18  IENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDNKEMLRE 77

Query: 79  EDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++R+    +   +  +   L     D  + ++E+  GAGG E+  +A
Sbjct: 78  ETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGEEAALFA 137

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE + +K E + +   +  G K    ++KG +AY  LK E G HR+ R+ 
Sbjct: 138 ANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTHRVQRVP 197

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I ++++D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 198 DTESSGRIHTSTATVAVLPEV-DDVDIVVNQNDIRIDVFRASGHGGQCVNTTDSAVRITH 256

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV CQ E+SQ KNK +A  +L+++LY  E  + E  A+I E  K ++G G    +
Sbjct: 257 LPTGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EKAQEERNASIAEDRKNQVGTGDRSER 314

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +        L+GD+D+ + A +   +
Sbjct: 315 IRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQ 357


>gi|327395061|dbj|BAK12483.1| peptide chain release factor 2 PrfB [Pantoea ananatis AJ13355]
          Length = 293

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 162/292 (55%), Positives = 209/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL+LA+E DD     E    L  ++ ++   +F  + SGE DS D Y+++
Sbjct: 1   MSQGLEDVQGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDL 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL
Sbjct: 61  QAGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E 
Sbjct: 181 HVNRTESAVRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 291


>gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51]
 gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51]
          Length = 362

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 188/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G  
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GD+   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVI 347


>gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
 gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|31076863|sp|Q87RN4|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
          Length = 362

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 185/343 (53%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AKE-DDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVV 347


>gi|303239757|ref|ZP_07326281.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
 gi|302592694|gb|EFL62418.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
          Length = 360

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 125/349 (35%), Positives = 189/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD    A  R   +N K  DP + +N  E + LM+E   L   +    E +    +   
Sbjct: 1   MFDRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  ++ D    +     L+  +  +E      +   L     D  D  +E+  GAGG
Sbjct: 61  AKELLNDKLDKDFREMVEMELKEAEEGLEKIKKELKILLLPKDPNDEKDVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMYTR+AE+  +KTE L+ +  E  G K     I+G  A+  LK E GV
Sbjct: 121 EEAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   ++N R HTS  ++ V P V + ++++I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 181 HRVQRIPETEANGRIHTSTVTVAVLPEV-EEVDVDINPNDLRIDTYRASGAGGQHINKTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SA+RITHIPTG+VV CQ +RSQ+KNK +A  +LR+KLYE+  +++  EIA   +      
Sbjct: 240 SAIRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQNSEIAQARKGQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R  +       +L+GD+D+ + A +   +
Sbjct: 300 DRSERIRTYNY-PQGRMTDHRIGLTLYKLESILEGDMDEVIDALITTDQ 347


>gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
 gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
          Length = 362

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 186/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L RE   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSREYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVI 347


>gi|170694748|ref|ZP_02885899.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
 gi|170140379|gb|EDT08556.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
          Length = 280

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 156/278 (56%), Positives = 209/278 (75%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ AGAGGTE+ DWA
Sbjct: 1   MAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR S
Sbjct: 61  AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+  RHTSFSS++VYP VDDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 121 PFDSSGGRHTSFSSVFVYPEVDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG QIRS
Sbjct: 181 MPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 241 YVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 277


>gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
 gi|189039982|sp|A5CYC3|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
          Length = 349

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  ++   L     +P +  ++   +  ++    L + ++  ++ +  + +    + L
Sbjct: 5   LDSIEKKYEELENLIGNPEIIADIARWQEYVKAHAELADIVAVYRDYKKVVKEIQDTIAL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     L  +  + +  +       L     D  +  LE+ AG GG E+ 
Sbjct: 65  MKEEPDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ ++TE L+ +  +  G K    LI+G   Y  +K E GVHR+ 
Sbjct: 125 LFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKGVYSRMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++++I   D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RIPTTESGGRIHTSAATVAVLPEA-EEVDVQIDPDDLRIDVFCSSGHGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q E+SQHKNK +A  +LRA+L  L+  ++E    I  + K+ +G G  
Sbjct: 244 ITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARL--LDRVQQEHQQKIASTRKSMVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDGDLD+ +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRVGLTLHRLDSVLDGDLDEIIDTLI 343


>gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385]
 gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385]
          Length = 362

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 188/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G  
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GD+   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLVDPVI 347


>gi|221135300|ref|ZP_03561603.1| peptide chain release factor 1 [Glaciecola sp. HTCC2999]
          Length = 361

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 119/338 (35%), Positives = 188/338 (55%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +    + L +E   L++ +   ++ Q    D     E+
Sbjct: 9   LETLVERFEEVQALLGDPDVIGDQNRFRSLSKEYAQLEDVVKSFRDYQGAQEDLASANEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD  + +   + ++  K  +E  +       L     D ++ +LE+ AGAGG E+ 
Sbjct: 69  MQE-DDAEMREMAQEEIKAAKASIETLEQALQILLLPRDPQDDSNCFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + ++ + +  ++GE  G K     I G  AYG +K E G HR+ 
Sbjct: 128 IFAGDLYRMYSRYAETKGWRVDLVSANEGEHGGYKEVIANIIGDGAYGVMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V +S  I+I+ +D R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLAEVAESEAIDINPADLRVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIP+GVVV+CQ ERSQHKN+A+A ++L+++L  +E +KR+ E A+  +S         
Sbjct: 248 ITHIPSGVVVECQDERSQHKNRAKAMSVLQSRLNNIEKEKRDAEEASTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   V D R N+      DV+ GD+D  ++
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDDVVAGDVDALLE 344


>gi|91784239|ref|YP_559445.1| peptide chain release factor 2 [Burkholderia xenovorans LB400]
 gi|91688193|gb|ABE31393.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           xenovorans LB400]
          Length = 280

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 156/278 (56%), Positives = 209/278 (75%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGGTE+ DWA
Sbjct: 1   MAREEGDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR S
Sbjct: 61  AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 121 PFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG QIRS
Sbjct: 181 LPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRTN+E ++   VLDGDLD F+ A+L 
Sbjct: 241 YVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 277


>gi|261855644|ref|YP_003262927.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
 gi|261836113|gb|ACX95880.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
          Length = 364

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 120/338 (35%), Positives = 174/338 (51%), Gaps = 7/338 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   LN    DP +  N    + L +E   L + +  +   Q    D      ++ 
Sbjct: 12  ALSERYDELNALLSDPEVINNQDRFRSLSKEHARLHDLVVVLDRYQKAKADLQAAEHMSK 71

Query: 78  EEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E  D  +     + ++ ++ E+E      +   L    AD  D  LE+ AG GG E+  +
Sbjct: 72  E-PDREMAALALEEMKELQTEIESLDEALKVHLLPHDPADDGDVILEIRAGTGGDEAAIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY ++A+ + ++TE L    GE  G +     I G   Y  LK E G HR+ R+
Sbjct: 131 AGDLLRMYLKYADTQGWRTEILSEQPGEHGGYREVIAQISGDGVYAALKFESGAHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V PVV +S  I +  S  RIDT+RASGAGGQH+N TDSA+R+T
Sbjct: 191 PTTETQGRVHTSAATVAVMPVVPESEAITLDPSTLRIDTFRASGAGGQHINKTDSAIRVT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           H+PTG+VV+CQ ERSQHKNKA+A ++L A+L + E QK   E A   ++         +I
Sbjct: 251 HLPTGMVVECQDERSQHKNKARALSVLAARLADAERQKAHAEQAATRKALVGSGDRSERI 310

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R N+       VL GDLD  +   
Sbjct: 311 RTYNF-PQGRVTDHRINLTLYQLDRVLLGDLDPIIHPL 347


>gi|302671177|ref|YP_003831137.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
 gi|302395650|gb|ADL34555.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
          Length = 357

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 118/349 (33%), Positives = 191/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +++   +  +  DP +  +    + LM+E+++L+  +    E +        
Sbjct: 1   MFDKIEDILRKFEDITMELNDPSVIADQERFRKLMKEQKNLEPLVECYNEYKKCKETIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   D LQ  K ++   +       L     D  +  +E+ AG GG
Sbjct: 61  SLAMLDEESDPEMKEMLKDELQTAKDKIPELEDKLKILLLPKDPNDDKNVIVEIRAGVGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + R+YTR+AE++ ++ E + + D    GIK+ + +IKG  AY  LK E GV
Sbjct: 121 DEAALFAADMYRVYTRYAERQNWRVETMSVEDIGIGGIKTVSFMIKGNGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P V + +E+EI  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSAITVAIMPEV-EDVEVEIDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVR+TH PTG+V+ CQ E+SQ +NKA+A  +LRAKLYELE +K+    A +  S     
Sbjct: 240 SAVRLTHFPTGIVISCQDEKSQQQNKAKALRVLRAKLYELEQEKKHNNEAELRRSQVGSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y       V D R  +       ++DGD+D+ + + +A  +
Sbjct: 300 DRSEKIRTYNFH-QGRVTDHRIGLTLYKIDQIMDGDIDEIIDSLIAADQ 347


>gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
 gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
          Length = 360

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 181/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL+ ++     P +  +    + L +E   L   ++   +      D     E+
Sbjct: 9   LEQLANRLTEIDELLMQPDVASDQDNYRKLSKEHAELGPVVALYNDYVQVQADVDAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     QE     + ++    +  Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPEMKEFAQEEISAAEGKMTAIEDDLQLMLLPKDPNDDKNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AEK ++K E +   + E  G +   + + G + Y  LK E G HR+ R+ 
Sbjct: 129 ADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRLIGNDVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  DD  ++ I+ +D RIDT+RASGAGGQH+N TDSA+RITH
Sbjct: 189 VTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDTFRASGAGGQHINKTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ +RSQHKNKAQA  +L A++ + ++  +E+ A    + K+ IG G    +
Sbjct: 249 FPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQM--QEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGD+D+ + A  A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVNALAA 346


>gi|253580116|ref|ZP_04857383.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848635|gb|EES76598.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39BFAA]
          Length = 358

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 188/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   +  +  +P +  N    + LM+E+  L   +   +E +        
Sbjct: 1   MFDKLDDLLIRFEEVLNELGEPGVTDNQEHFQKLMKEQSDLQPIVDAYREYKKNKETIQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  VE  + E     L     D+ +  +E+ AGAGG
Sbjct: 61  SLSMLEEEKDEDMREMLKEELSEAKKNVEELEHELKILLLPKDPNDNKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE + +++    G K  T +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMITGAGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMPEA-EEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +      +VL+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHRLENVLNGDLDEIIDSLIAADQ 347


>gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586]
 gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586]
          Length = 362

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 189/343 (55%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G G  
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GD+   ++  +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVI 347


>gi|332290276|ref|YP_004421128.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
 gi|330433172|gb|AEC18231.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
          Length = 360

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 185/342 (54%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +  + +   +E   L++ +      +    D      L
Sbjct: 9   LETLDERYEELQALLGDPSVINDQEKFRAYSKEYSQLEDVVKCFARWKQLNSDLQEAQIL 68

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD S+ +   + +    Q I+   +  Q   L     D  + YLE+ AG GG E+ 
Sbjct: 69  L---DDPSMKEMAEEEIAHCTQGIEESEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAG 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++TE L  ++ E+ G K   + I G N YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESKRWRTEVLSANESEQGGYKEIIVKISGENVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPKTESQGRIHTSACTVAVMPELPESALPEINPADLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +++  E A+   S         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLASRLVQAEEERKAAEQADTRRSLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      ++++G +DD ++  + 
Sbjct: 306 KIRTYNY-PQGRVTDHRINLTLYRLDEIMNGKIDDLIQPIIT 346


>gi|315452804|ref|YP_004073074.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
 gi|315131856|emb|CBY82484.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
          Length = 363

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 228/353 (64%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  +   ++    L+ L  +  DP  WQ+   A    +E+  ++  +S  + 
Sbjct: 12  ELENKCQNVAQIIKPESLQDTLTALEREQSDPLFWQDKERAASKNQEKVKIERLLSAYQN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ L +   L EL    DD S L +  ++   ++  V+  +   +L+   D  DA + +
Sbjct: 72  AKNTLVEARELFELVQN-DDPSTLAQLFEDAPHLQACVQSLEVGVMLANAHDGRDAIVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             G GG ESQDW +ML RMY RWAE++ FK E L+  +GEEAGIK    +I+G N YG++
Sbjct: 131 QPGVGGVESQDWGSMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFIIRGINVYGYM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++N +RHTSF+S+ V P VDD I+I I + D RIDTYRASGAGGQ
Sbjct: 191 KNENGVHRLVRMSPFNANGKRHTSFASVQVSPEVDDDIDIVIEDKDIRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+ TG+VVQCQ +RSQHKNKA A  ML+++LYELEL +++E ++    
Sbjct: 251 HVNKTESAIRITHLATGIVVQCQNDRSQHKNKAMALKMLKSRLYELELHRQKEQSSA--E 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K+EIGWG QIRSYVL PYQ +KD R+ I  ++   +LDGDLD  M+A L  K
Sbjct: 309 EKSEIGWGHQIRSYVLAPYQQIKDARSEIAYSNVEAILDGDLDAMMEAVLVSK 361


>gi|118443694|ref|YP_879014.1| peptide chain release factor 1 [Clostridium novyi NT]
 gi|166223551|sp|A0Q312|RF1_CLONN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118134150|gb|ABK61194.1| peptide chain release factor 1 [Clostridium novyi NT]
          Length = 357

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 118/351 (33%), Positives = 194/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    +   
Sbjct: 1   MLDKLEFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  EE D  + +   + ++ ++  +    E  +   L     D  + ++E+ AGAGG
Sbjct: 61  NKEMLSEETDKDMKEMIQEEIKTLEESIVKDQEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G  AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V D ++I+I  +D R+D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLPEV-DDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LY  E  + E  A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLY--EKAEAERSASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQ 347


>gi|303249514|ref|ZP_07335721.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251860|ref|ZP_07533761.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256355|ref|ZP_07538138.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302651588|gb|EFL81737.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860552|gb|EFM92564.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865181|gb|EFM97081.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 301

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 157/299 (52%), Positives = 214/299 (71%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQVEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINLADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              + E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQVMEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|154506039|ref|ZP_02042777.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
 gi|153793538|gb|EDN75958.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
          Length = 314

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 157/310 (50%), Positives = 221/310 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L +++  I+++     D  +L+E++ EE D   +QE  + L R + E E  + +
Sbjct: 1   MQVLKSLQDSVKQIEQMYADYEDLGLLIEMSQEEQDEETVQEIEEELLRFEGEFEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GE D + A + +HAGAGGTES DWANML RMYTRWAEK+ F  E L+  +G+ AGI
Sbjct: 61  TLLTGEYDRDHAIVTLHAGAGGTESCDWANMLYRMYTRWAEKKGFSVEVLDYLEGDVAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  ++G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S  V P +++ I+IEI++
Sbjct: 121 KGVTFEVRGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEEDIDIEIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ +  +       EIG+G QIRSYV+QPY +VKD RTN+E ++ + VLDG+LD 
Sbjct: 241 LMKQQEQADKVSGIRGEIKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVLDGNLDP 300

Query: 346 FMKATLAIKK 355
           F+ A L+  K
Sbjct: 301 FINAYLSAPK 310


>gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC
           824]
 gi|20139340|sp|Q97F68|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC
           824]
 gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
          Length = 359

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 189/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   ++N +   +E +    D     E+
Sbjct: 5   LEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEADKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D  + +   + ++ ++  V    E  +   L     DS + ++E+  G GG E+ 
Sbjct: 65  LRDKIDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ + TE +  ++ +  G K    ++KG  AY  +K E G HR+ 
Sbjct: 125 LFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P V D ++IEI+ +D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPNTESSGRIHTSAATVAVLPEV-DDVDIEINPNDIRIDVFRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+ Q KNK +A  +LRA+LY  E  + E  A I E+ + ++G G  
Sbjct: 244 ITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLY--EKAEAERNAGIAENRRNQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ +   +  ++
Sbjct: 302 SERIRTYNF-PQGRITDHRIGLTIYKLEQFLDGDIDEVINGLITAEQ 347


>gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9312]
 gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 354

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 138/344 (40%), Positives = 202/344 (58%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N   AK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + + AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESQQGLKKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQYEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEIADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRM 345


>gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2]
          Length = 361

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+R   +     DP +  N  + + L +E   L++ +      Q    +     E+
Sbjct: 9   LENLVERFEEVQALLGDPQVIGNQDKFRNLSKEFSQLESVVGGFNAYQQAQENLDSANEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD  + +   + L+  K ++E  + E     L     D ++ +LEV AGAGG E+ 
Sbjct: 69  LKE-DDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLEVRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + ++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGILKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S  I+I+ +D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L  +E +KR         S    G    
Sbjct: 248 ITHLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEEEKRAAEEASTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD----LDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++GD    LD  M+   A
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTIYRLDEVIEGDLKQLLDPIMQEHQA 352


>gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9301]
 gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9301]
          Length = 354

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 139/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRM 345


>gi|226945982|ref|YP_002801055.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
 gi|226720909|gb|ACO80080.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
          Length = 280

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 162/278 (58%), Positives = 213/278 (76%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+EE+D     + +  ++R++  +E  +F  + SGE D+ +AYL+V AG+GGTE+QDWA
Sbjct: 1   MAVEENDEGAANDVAAEVERLRGILEKLEFRRMFSGEMDARNAYLDVQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           NMLLRMY RWA+K  F TE +E+ +GE AGIKSAT+ ++G  A+GWL+ E GVHRLVR S
Sbjct: 61  NMLLRMYLRWADKHGFDTEIVELSEGEVAGIKSATVHVRGEYAFGWLRTEIGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFS+++  P VDD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFSAVFASPEVDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT  VV CQ ERSQH N+ +A  MLRAKLYELE+ KR   A   E +K++IGWG QIRS
Sbjct: 181 LPTNTVVSCQNERSQHANRDRAMKMLRAKLYELEVMKRNVAAQALEDTKSDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRT IE ++   VLDGDLD+F++A+L 
Sbjct: 241 YVL-DQSRIKDLRTGIENSNCDAVLDGDLDEFIEASLK 277


>gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 362

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 187/344 (54%), Gaps = 7/344 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +    + L +E   L+      +  Q    D +  
Sbjct: 6   LVKLETLVERYEEVQHLLGDPDVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGT 128
            E+A E DD  + +   + ++  K E+E      Q   L     D  + ++E+ AGAGG 
Sbjct: 66  EEMAQE-DDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AE+R ++ E +  +  E+ G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR  E A+   +      
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   V D R  +     ++V++GDLD  ++  L
Sbjct: 305 RSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVL 347


>gi|237743972|ref|ZP_04574453.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|256027415|ref|ZP_05441249.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|289765378|ref|ZP_06524756.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|229433003|gb|EEO43215.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|289716933|gb|EFD80945.1| peptide chain release factor 2 [Fusobacterium sp. D11]
          Length = 308

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 152/303 (50%), Positives = 211/303 (69%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++   E  + S   E S+  + +K +VE  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIEDEEVLIDFV-ESGETSFESELSEKHKILKNDVEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVTELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI  +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEIDPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|301384023|ref|ZP_07232441.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058729|ref|ZP_07250270.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato K40]
 gi|331016328|gb|EGH96384.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 304

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 166/301 (55%), Positives = 220/301 (73%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + E+   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE
Sbjct: 2   LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ 
Sbjct: 62  MDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 242 RNAASQALEDTKSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|159898428|ref|YP_001544675.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891467|gb|ABX04547.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 337

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 144/333 (43%), Positives = 206/333 (61%), Gaps = 6/333 (1%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  +  +P LW N  +A+ +++    +   +     +   L     LL+L+   DD   
Sbjct: 3   DLEHQAAEPSLWDNPQQAQSILQRLARMQEELKMWDSLAVDLATLRDLLQLSA--DDADS 60

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L +    +  +   V+  +   LL  + DS +A++ + +GAGG ESQDWA MLLRMY+RW
Sbjct: 61  LSQIEREVNGLTKSVDQLELSILLGEKYDSTNAFISIQSGAGGVESQDWAQMLLRMYSRW 120

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            E + F+T  +++ DGEEAGIKSATL ++GP AYG+ K E G+HRLVR+SP+D+N RRHT
Sbjct: 121 GESQGFRTTIVDMMDGEEAGIKSATLELRGPYAYGYAKAEAGIHRLVRLSPFDANHRRHT 180

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVV 261
           SF+ + V P VDD+ E++I+  D R+D YRA G GGQ VNTTDSAVR+ +    P  ++V
Sbjct: 181 SFARVEVLPEVDDAAEVKINPEDLRVDVYRAGGHGGQGVNTTDSAVRLVYRGGTPDEIIV 240

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ +NK  A N+LRA+L E EL ++       +    +  WG QIRSYVL   +
Sbjct: 241 TCQNERSQLQNKETAMNVLRARLLERELARQVAERAKLKGEHRDAAWGNQIRSYVLDD-R 299

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            VKD RTN+E ++   VLDG++D F+ A L  +
Sbjct: 300 RVKDHRTNVETSNTQAVLDGEIDLFIDAFLRWR 332


>gi|311111708|ref|YP_003982930.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
 gi|310943202|gb|ADP39496.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
          Length = 375

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 139/355 (39%), Positives = 214/355 (60%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D +     L  L+ +   P LW +   A+ +     H    ++ +  +
Sbjct: 13  LRSIYASIVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNL 72

Query: 63  QDRLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             R+ D  +++ELA  ED+     +L E     + ++ +++  +   LLSGE D  +A +
Sbjct: 73  ASRIDDVEVMVELAQTEDESSAEDLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVV 132

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  +  P A+G
Sbjct: 133 TIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFG 192

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +R+SG G
Sbjct: 193 RLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPG 252

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  Q++E+     
Sbjct: 253 GQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLML-RQEQEDAKKKE 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +   +  WG Q+RSYVL PYQMVKDLRT  E+ + S VLDG L+ F++  +  +
Sbjct: 312 LAGDIKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRWR 366


>gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
 gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
          Length = 362

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 121/348 (34%), Positives = 187/348 (53%), Gaps = 15/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AKE-DDEEMREMAQEEIKDAKETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD----LDDFMKATLA 352
             +IR+Y   P   V D R N+     ++V++GD    +D  ++   A
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLNEVMEGDVSCLVDPVIQEHQA 352


>gi|134302701|ref|YP_001122669.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050478|gb|ABO47549.1| Peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 327

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 169/326 (51%), Positives = 228/326 (69%), Gaps = 5/326 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ P V  D  I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +
Sbjct: 180 VFISPEVDDDIDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDL
Sbjct: 240 RSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDL 298

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RT +E T+   VLDGDLD F++A+L 
Sbjct: 299 RTGVENTNTQAVLDGDLDKFIEASLK 324


>gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
 gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
          Length = 361

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 118/340 (34%), Positives = 181/340 (53%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +    + L +E   L+  +      Q    D     E+
Sbjct: 9   LETLVERYEEVQALLSDPSVISDQNRFRTLSKEYSELEEVVKTFLAYQQAQEDLSSAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   +  +  K ++    +  Q   L     D+N+ +LEV AG GG E+ 
Sbjct: 69  LKDS-DPEMREMAQEEYKEAKAQISTLEDDIQVLMLPKDPKDNNNVFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ 
Sbjct: 128 IFAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR    A+   +         
Sbjct: 248 ITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+     ++V+ GDL   ++  
Sbjct: 308 RIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLGAVVEPL 346


>gi|300741817|ref|ZP_07071838.1| peptide chain release factor 2 [Rothia dentocariosa M567]
 gi|300381002|gb|EFJ77564.1| peptide chain release factor 2 [Rothia dentocariosa M567]
          Length = 375

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 139/355 (39%), Positives = 214/355 (60%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D +     L  L+ +   P LW +   A+ +     H    ++ +  +
Sbjct: 13  LRSIYASIVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNL 72

Query: 63  QDRLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             R+ D  +++ELA  ED+     +L E     + ++ +++  +   LLSGE D  +A +
Sbjct: 73  ASRIDDVEVMVELAQTEDESSKEDLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVV 132

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  +  P A+G
Sbjct: 133 TIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFG 192

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +R+SG G
Sbjct: 193 RLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPG 252

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  Q++E+     
Sbjct: 253 GQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLML-RQEQEDAKKKE 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +   +  WG Q+RSYVL PYQMVKDLRT  E+ + S VLDG L+ F++  +  +
Sbjct: 312 LAGDIKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRWR 366


>gi|302131691|ref|ZP_07257681.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 304

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 166/301 (55%), Positives = 220/301 (73%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + E+   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE
Sbjct: 2   LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAIDDVAAEVERLRASLEKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ 
Sbjct: 62  MDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGTRRHTSFSAVFVSPEIDDNIEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 242 RNAASQALEDTKSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|291547175|emb|CBL20283.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           SR1/5]
          Length = 358

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 187/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L  +  +P +  +    + LM+E+  L   +   KE +        
Sbjct: 1   MFDKLDDLLVRFEELLNELGEPGVTDDPAHFQKLMKEQSDLQPIVDAYKEYKKNKETIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +   E D  + +   + L   K  VE  + E     L     DS +  +E+  GAGG
Sbjct: 61  SLSMLESEKDEEMREMLKEELSDAKKRVEELEHELKILLLPKDPNDSKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE L +++    G K  T +IKG  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIKGEGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  ++C+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMPEA-EEIDFHLDLNECKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALRVLRSRLYEMELAKQHDAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +      ++L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHRLENILNGDLDEIIDSLIAADQ 347


>gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12]
 gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12]
          Length = 361

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 186/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPGVISDQDRFRALSKEYSQLEDVVATFKAFQQATEDLDAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E+D  I +   + ++  K  +    +  Q   L     D N+A++E+ AGAGG E+ 
Sbjct: 69  -LSENDPEIKEMAQEEMKDAKSIIVKLEDELQILLLPKDPNDDNNAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+ E  +++TE +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLYRMYTRYFETNRWQTEIMNANEGEHGGFKEVIIKVSGEGVYGRLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         +    G    
Sbjct: 248 LTHIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEETTRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +IR+Y   P   V D R N+     +DV++G+LD  +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLNDVMEGELDVLI 343


>gi|269140268|ref|YP_003296969.1| protein chain release factor B [Edwardsiella tarda EIB202]
 gi|267985929|gb|ACY85758.1| protein chain release factor B [Edwardsiella tarda EIB202]
          Length = 289

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 168/288 (58%), Positives = 210/288 (72%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  + +++   +F  + SGE DS D YL++ AG+
Sbjct: 1   MEDVSGLLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDIQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++
Sbjct: 181 TESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMEDTKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 287


>gi|119775698|ref|YP_928438.1| peptide chain release factor 1 [Shewanella amazonensis SB2B]
 gi|166223600|sp|A1S8R2|RF1_SHEAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119768198|gb|ABM00769.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           amazonensis SB2B]
          Length = 363

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q  + D     E+
Sbjct: 9   LEGLLERNEEVLALLSDASIISDQDRFRALSKEYAQLEDVVKGFKAYQQAVADLETAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K  +E  + E     L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDPELKEMAQEEIKSAKASLERLEAELQILLLPKDPNDEANAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++ E +  ++GE  G K       G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAETQRWQVEIMSANEGEHGGYKEVIARFSGERVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  +EI+ S+ RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLHEVPEAEAVEINPSELRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG VV+CQ ERSQHKNKA+A ++L A+L   E +KR    A    +         
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKARAMSVLVARLQAAEDEKRRSAEATTRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++GDL+  ++  +
Sbjct: 308 RIRTYNF-PQGRVSDHRINLTLYRLNEVMEGDLNALIEPIV 347


>gi|237738152|ref|ZP_04568633.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
 gi|229420032|gb|EEO35079.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
          Length = 308

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 152/303 (50%), Positives = 207/303 (68%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
              ++  K +   L +  +L+E   E+ +    +E  +    +  +VE+     LL GE 
Sbjct: 5   KELVAEFKNLVAELENEEVLIEFV-EQGETDFQEELEEKHIILGKDVEHFDTRLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN+A + +H+GAGGTE+ DWA+ML RMY+RW   +K+K   ++   G+  GIKS T ++
Sbjct: 64  DSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCSDKKYKISEMDFMPGDSVGIKSITFMV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NA+G+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDDSIE+ I  SD RIDT
Sbjct: 124 EGMNAFGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDSIEVNIDPSDIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH PTG+VV CQ+ERSQ  N+  A  +L++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPTGIVVTCQRERSQLSNRETAMKLLKSKLIELEMKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DGD+D F+   L 
Sbjct: 244 EEELKKLQGEQSDIGWGNQIRSYVFQPYTLVKDHRTNCESGNIKAVMDGDIDIFINGYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WNK 306


>gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
          Length = 360

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 188/342 (54%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L++ +       ++L  N+   EL
Sbjct: 9   LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRW-NQLNSNIAEAEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +     ++  K+E+E      Q   L     D  + YLE+ AG GG E+ 
Sbjct: 68  ML--DDPEMKEMAEMEIEESKVEIEDVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAG 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++  E A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 306 KIRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPIIT 346


>gi|332295608|ref|YP_004437531.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
 gi|332178711|gb|AEE14400.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
          Length = 363

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 148/349 (42%), Positives = 222/349 (63%), Gaps = 5/349 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  +    D DN +++L  +     +P +WQ+V ++  L +   +L  +I     +
Sbjct: 9   LNERILKIRDCLDLDNKIKKLEEIRNDLSNPEIWQDVQKSSNLTQLADNLQKSIDEWNNL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D L   E      D     E +++ + +   +E  + ++LLSG+ DS DA L + 
Sbjct: 69  NSSFEDFLFWTEF----QDEGAENEIAESYKNLVKILEELEVKALLSGKYDSYDAMLSIS 124

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++QD+A MLLRMY RW EK K+  E ++   G+EAGI+SAT+  KG  +YG+LK
Sbjct: 125 AGAGGVDAQDFAEMLLRMYIRWGEKNKYSVELVDQSPGDEAGIRSATIFFKGKYSYGFLK 184

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRL+R+SP+D N+RRHTSF  + V P++++  EI +   + +I+T+RASGAGGQH
Sbjct: 185 SEQGVHRLIRLSPFDFNNRRHTSFVLVEVTPLIENVKEINVKNEEIKIETFRASGAGGQH 244

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VV C+ ERSQ +NK  A  +L ++L  L  +K+++  +  +  
Sbjct: 245 VNKTDSAVRITHLPTGIVVTCRNERSQFQNKEAAMKILISRLNSLYEEKQKDKMSEFKGE 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +  WG+QIR+YV+ PY MVKD RTN+E      VLDG++D+F KA L
Sbjct: 305 T-DASWGKQIRTYVMHPYTMVKDHRTNVEIGDVYGVLDGNIDEFQKAFL 352


>gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
 gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
          Length = 360

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 178/339 (52%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNSNLEEAKIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +    EVE   Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESEAELTEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K    L+ G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAELKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E  K  +E A+   +         +IR
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQDKLAQEQADTRRNLLGSGDRSDKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 309 TYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 346


>gi|187777270|ref|ZP_02993743.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
 gi|187774198|gb|EDU38000.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
          Length = 358

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 190/342 (55%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+  E
Sbjct: 8   IENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEMLRE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++ + L++E  + E     L     D  D ++E+ AGAGG E+  +A
Sbjct: 68  ESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGDEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVHR+ R+ 
Sbjct: 128 SNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I I+ +D RID YRASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDININANDLRIDVYRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R         S+   G    +IR
Sbjct: 247 LPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 307 TYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|110639213|ref|YP_679422.1| peptide chain release factor 2 [Cytophaga hutchinsonii ATCC 33406]
 gi|110281894|gb|ABG60080.1| bacterial peptide chain release factor 2 (bRF-2) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 358

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 143/353 (40%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   +  L G   +D+ +  +      +  P  W +  EA+ ++R  ++          
Sbjct: 8   ELKASILALRGYLGYDSKMDEIKAEQELSLAPTFWDDSKEAEKILRSIKNKKVWTDPYDA 67

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D   L E     D     +E       +   +E  +F+ +LS E D   A LE+
Sbjct: 68  LLTKLGDLEALNEFYQAGDIDD--KEMDAEFAAVAKVLEELEFKKMLSAEEDQLSAVLEI 125

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + GAGGTES DWA+ML+RMY  W EK  +    +    GE AGIK A+L I+G  AYG L
Sbjct: 126 NPGAGGTESNDWADMLMRMYIMWGEKNGYTVREIVNQPGEVAGIKFASLGIEGQFAYGNL 185

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR SP++++ +R TSF+S++VYP VD++I IEI+  D   DT+RA GAGGQ
Sbjct: 186 KSEIGVHRLVRDSPFNADGKRQTSFASVYVYPEVDETINIEINMGDVEWDTFRAGGAGGQ 245

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H P+G++++CQQERSQ +NK +A  +L+++LY++E+ KR E     E 
Sbjct: 246 NVNKVETAVRLKHKPSGLIIECQQERSQIQNKDKALKLLKSRLYQIEIDKRNEAKAAVEG 305

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K +I +G QIR+YVL PY+++KD+RT +E+T   +VL GDL++++KA L +K
Sbjct: 306 TKKKIDFGSQIRNYVLFPYKLIKDVRTGVERTDVDNVLAGDLNEYIKAYLLMK 358


>gi|310829178|ref|YP_003961535.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
 gi|308740912|gb|ADO38572.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
          Length = 357

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 125/346 (36%), Positives = 191/346 (55%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +   LN K  DP +  +  + + LM+E  H++  I+   E +  L       E+
Sbjct: 5   LDFLSSKYQELNEKIADPDIIADQAQWQKLMKEHAHIEPIINRYNEYKKTLEGIEESKEM 64

Query: 76  A----LEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTES 130
                +++D   + +   D L   K  +E   +   L     D  +  +E+ AGAGG+E+
Sbjct: 65  LSDKSIDKDFEEMCKAELDELTERKAALEDELKVLLLPKDPNDDKNVIVEIRAGAGGSEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RM+TR+AE++ +K+E +  +  +  GIK  T  I+G  AY  LK E GVHR+
Sbjct: 125 ALFAGDLFRMFTRYAERQGWKSEIMNSNIPDIGGIKEITFSIEGRGAYSRLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R HTS +++ V P   + +EI+I+ +D RID YR+SG GGQ VNTTDSAV
Sbjct: 185 QRIPSTESGGRIHTSTATVAVLPEA-EDVEIDINPNDLRIDVYRSSGNGGQCVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITH PTG+VV CQ E+SQ KNK +A  +L+A+L+E+E+QK++ EIA   +S        
Sbjct: 244 RITHEPTGMVVTCQDEKSQLKNKEKAMKVLKARLFEIEMQKQQSEIAENRKSQVGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +        LDG++D+ + A +   +
Sbjct: 304 ERIRTYNF-PQGRVTDHRIGMTVYQLEAFLDGEIDEMVDALITSDQ 348


>gi|323702617|ref|ZP_08114279.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532436|gb|EGB22313.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
          Length = 356

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 189/345 (54%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
                 +   L  +  DP +  +  + K L++    L   +      K+++  L ++ ++
Sbjct: 5   LQALEDKFEQLEGQISDPEIIADQAKWKQLVKAHADLTEVVDVFRQYKKVRSDLEESKLM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  LE D   +++   + L + K E+E K +   L     D  +  +E+  G GG E+ 
Sbjct: 65  LEEKLEPDFREMVELEIEELSKRKEELEQKLKILLLPKDPNDEKNVIVEIRGGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ ++TE ++ ++ +  G K  T +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRFAERKGWRTEIIDANETDLGGFKEITFVVEGKGAYSTLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++IEI+ +D RID + ASG GGQ VNTT SAVR
Sbjct: 185 RVPATESGGRIHTSAATVAVLPEA-EEVDIEINPNDIRIDLFCASGPGGQCVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV CQ E+SQHKNK +A  +LRA+L +   Q++++       S    G    
Sbjct: 244 ITHIPTGIVVSCQDEKSQHKNKDKAMRVLRARLLDKAQQEQQQAIASTRKSMVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VL+GDLD+ ++A +   +
Sbjct: 304 RIRTYNF-PQNRVTDHRIGLTLHRLDQVLEGDLDEIIEALITTDQ 347


>gi|119470492|ref|ZP_01613195.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
 gi|119446193|gb|EAW27470.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
          Length = 283

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 163/281 (58%), Positives = 208/281 (74%), Gaps = 1/281 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E +  L+ +  ++E  +F  + SG  D+NDAYL++ +G+GGTE+Q
Sbjct: 1   MLELAIEAEDKDTFDEANAELEGLNEQLESLEFRRMFSGTHDANDAYLDLQSGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW NMLLRMY RW E + FK E +E  DG+ AGIK AT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWCNMLLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFVGEYAYGWLRTETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ SD RID YRASGAGGQHVNTT+SAVR
Sbjct: 121 RKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPSDLRIDVYRASGAGGQHVNTTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++       E +K++IGWG Q
Sbjct: 181 ITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDAKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYVL     +KDLRT +E  +   VLDG+LD F++A+L 
Sbjct: 241 IRSYVLDDS-RIKDLRTGVENRNTQSVLDGNLDKFIEASLK 280


>gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116]
 gi|166223617|sp|A7MY68|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116]
          Length = 362

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 185/343 (53%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D     ++
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVV 347


>gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 361

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 180/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +    + L +E   L+  +      ++   D     E+
Sbjct: 9   LETLVERYEEVQALLSDPSVISDQNRFRALSKEYSELEEIVKTFLNYKETQDDLASAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   +  +  K ++    +  Q   L     D+N+ ++EV AG GG E+ 
Sbjct: 69  LKDS-DPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ 
Sbjct: 128 IFAGDLFRMYSRYAENKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +THIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR    A+             
Sbjct: 248 LTHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRDLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+     ++V+ GDL   +   
Sbjct: 308 RIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLSAIIDPL 346


>gi|254520297|ref|ZP_05132353.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
 gi|226914046|gb|EEH99247.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
          Length = 361

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 126/344 (36%), Positives = 187/344 (54%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  KE +  + D     E+  E
Sbjct: 9   IENKYDELSVKISDPSIMANQNEWRKLCKEHADLEVIVTAYKEYRTVIDDLAANKEMLAE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  S+ +  +       +       L     D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMREMLSEEISDLTAREGELEKHIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE +++  E +  ++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 ANLFRMYTRYAETQRWSVELMSANETDIGGFKEVVFMIKGSGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D +EIEI+E D RID YR+SG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTATVAVLPEV-DDVEIEINEKDLRIDVYRSSGNGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGVVV CQ E+SQ KNK +A  +LR++LYE    + E  A I E  K+++G G    +
Sbjct: 248 IPTGVVVACQDEKSQLKNKEKAMKVLRSRLYEAA--EAERNAGIAEDRKSQVGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +        L+GD+++ + A +   +
Sbjct: 306 IRTYNY-PQGRVTDHRIGLTLYKLESYLNGDIEEVINALITADQ 348


>gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1]
 gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1]
 gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
          Length = 337

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 146/326 (44%), Positives = 215/326 (65%), Gaps = 3/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ + + L   +S + E++    D   L E+A  ++D SI+ E  
Sbjct: 1   MAAPDFWNDSESAQKVVMQLKGLKGIVSPLNELESSAEDLEALFEMA--DEDESIVDEVR 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + R+++ ++  + ++LL+G  DS  A + ++A  GGT++ DWA+MLLRMY+ WA  ++
Sbjct: 59  SEIDRLEVVLDDLELKALLNGPNDSAGAIVTINARDGGTDANDWADMLLRMYSAWAVGQE 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+  + EEAGI  A++ ++GP AYG+LKGE+G+HRLVRISP++S S+R TSF+++
Sbjct: 119 YKIELLDRQENEEAGINHASIAVRGPMAYGYLKGEEGMHRLVRISPFNSESKRQTSFAAV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE+ + + D R DTYRASGAGGQHVN TDSA+R+THIPT  VVQCQ +RSQ
Sbjct: 179 SVSPEIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+N+  AW MLRAKL  +E ++RE        ++   G+G QIR+Y L P Q VKD RT 
Sbjct: 239 HQNRDTAWKMLRAKLARIEEERREAEEAKKYETQARTGFGSQIRNYFLHPDQRVKDARTG 298

Query: 330 IEKTSPSDVLDG-DLDDFMKATLAIK 354
               + + VLDG +L  F  A L +K
Sbjct: 299 HYVGNFNSVLDGSELQGFFDAFLRLK 324


>gi|293392123|ref|ZP_06636457.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952657|gb|EFE02776.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 360

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 178/339 (52%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LDSLKERYEELEALLGDAAVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNSNLEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +    +VE   Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++  E L  ++ E+ G K    L+ G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETKRWHVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +K  +E A+   +         +IR
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADTRRNLLGSGDRSDKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +DD ++  + 
Sbjct: 309 TYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIIT 346


>gi|158521778|ref|YP_001529648.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
 gi|158510604|gb|ABW67571.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
          Length = 337

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 160/334 (47%), Positives = 221/334 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL+ +         W +   A  L++ER  L + +  + E+   + D  +LLELA E
Sbjct: 1   MRERLAEIEALVAREGAWDDPERAATLLKERSLLSDRLDLLSELGREVEDAEVLLELAEE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D     E +  ++ ++ ++E    +  LS E D  DA + ++AGAGGT++QDWA ML 
Sbjct: 61  EADSDAAAEVTRRVEGVRKKIEKLSIDLTLSDEDDPADAIVAINAGAGGTDAQDWAEMLF 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW E++ +K E ++   G+EAGIKSAT   KG NA+G+LK E GVHRLVRISP+++
Sbjct: 121 RMYTRWIERKGYKLEMIDHQPGDEAGIKSATFSAKGLNAFGYLKNESGVHRLVRISPFNA 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + +R TSF+S++V+P +D  I+I+I E D RIDT+RASGAGGQHVN T SAVRITH P+G
Sbjct: 181 SGKRQTSFASVFVFPQIDRQIDIDIDEKDLRIDTFRASGAGGQHVNKTSSAVRITHYPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           VVVQCQQERSQ +N+  A  +LRA+LY+LE  K+ +     E+ K +I WG QIRSY L 
Sbjct: 241 VVVQCQQERSQLRNREIAMAVLRARLYKLEKDKQNQKLQDMEAGKDDIAWGSQIRSYFLH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           PYQ  KD RT+ E      VLDG++D F++A L 
Sbjct: 301 PYQKAKDHRTDFEIGDVYSVLDGEIDPFIEAVLM 334


>gi|255530197|ref|YP_003090569.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
 gi|255343181|gb|ACU02507.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 145/350 (41%), Positives = 218/350 (62%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D +N ++ +      T  P+ W +  +A+  + E           ++ 
Sbjct: 9   LRDRVASLRRYLDVENRLEDIRIEQELTLQPNFWDDPKKAEQHIAEINSKKVWTDAWQQA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D L+L +     D  +  +E  +        +E  + +++L  + D   A +++ 
Sbjct: 69  NSLLEDTLVLFDFLQSGD--ATEEEMQEQYDACLKAIEDLELKNMLKSKEDQLPAVMQIT 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  W EK  +K    +  +GE AG+KS TL   G  AYG+LK
Sbjct: 127 AGAGGTESCDWAYMLMRMYMMWGEKNGYKITEQDYQEGEIAGVKSVTLQFSGDFAYGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN+RRHTSF+S++VYP+VDD+IEIE+ +S+   +T+R+ GAGGQ+
Sbjct: 187 GENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G++++ Q+ RSQ +NK  A  +L+++LYE E++KR E   + E +
Sbjct: 247 VNKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKRMEATALIEGN 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYVL   + VKD RTN + ++P  VLDG+L+DF+KA L 
Sbjct: 307 KKKIEWGSQIRSYVLDD-RRVKDHRTNFQSSNPQAVLDGELNDFLKAYLM 355


>gi|332299528|ref|YP_004441449.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176591|gb|AEE12281.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 373

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 141/359 (39%), Positives = 211/359 (58%), Gaps = 11/359 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   LG   D D    +L     +T+ P  W +V  A+  MR    + + I   + 
Sbjct: 9   ELLERTKALGRYLDIDQRRVQLEEEELRTQAPDFWDDVPRAQQQMRRVGEIRSWIEAFEA 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +  +   EE      Q+  D   R    VE  +  ++LS E D   A L++
Sbjct: 69  VDAATQEVALAYDFYKEEAIEE--QDVDDAYARAIKLVEDLELRNMLSAEEDRLGAVLKI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTESQDWA+ML+RMY RWAE+  +K       DG++AGIK+ T+ I+G  AYG+L
Sbjct: 127 NAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDGDDAGIKTVTMQIEGELAYGFL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+E++      DT+R+SGAGGQ
Sbjct: 187 KSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEVEVNPGLLSWDTFRSSGAGGQ 246

Query: 242 HVNTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         +V++  + RSQ  N+  A  +LR++LY+ EL++R 
Sbjct: 247 NVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDNRENALRLLRSQLYDKELERRR 306

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +  E++K +I WG QIRSYV    + VKD RT  + +  + V+DGDLD F+KA L 
Sbjct: 307 AAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQTSDVNGVMDGDLDAFIKAYLM 364


>gi|148657451|ref|YP_001277656.1| peptide chain release factor 2 [Roseiflexus sp. RS-1]
 gi|148569561|gb|ABQ91706.1| bacterial peptide chain release factor 2 (bRF-2) [Roseiflexus sp.
           RS-1]
          Length = 317

 Score =  314 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 142/311 (45%), Positives = 196/311 (63%), Gaps = 3/311 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   +  I+ I  +L     L+ELA  EDD S+  + +  L+R    +E  + E
Sbjct: 1   MQRLTRLKEEVERIEAIDRQLTALADLIELAAAEDDDSLQADIAAELKRTGEAIEALEIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL+G  D  DA+L + AG GGT++QDWA MLLRMY RW E+R F+   ++  +GEEAGI
Sbjct: 61  VLLNGPYDDRDAFLSIKAGTGGTDAQDWAEMLLRMYMRWGERRGFQVALIDKSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ ++GP AYG  K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I  
Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRA 282
            D RID +R+SG GGQ VNTTDSAVRIT+    P  +VV CQ ERSQ +N+  A  +LR 
Sbjct: 181 EDIRIDVFRSSGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L E ELQ++ E          +  +G Q+R+Y L PY +VKD RT+ E +    VLDGD
Sbjct: 241 RLLERELQRKREERARLRGEYRQADFGNQMRTYYLHPYTLVKDHRTDHETSDVHAVLDGD 300

Query: 343 LDDFMKATLAI 353
           +D F++A L  
Sbjct: 301 IDPFIEAYLRW 311


>gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691540|sp|B2SFF6|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 361

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLI 347


>gi|261867616|ref|YP_003255538.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412948|gb|ACX82319.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 360

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 180/339 (53%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNSNLEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +    +VE + Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K    L+ G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +K  +E A+   +         +IR
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQADTRRNLLGSGDRSDKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +DD ++  + 
Sbjct: 309 TYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIIT 346


>gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 360

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 187/342 (54%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L++ +       ++L  N+   EL
Sbjct: 9   LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRW-NQLNSNIAEAEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG E+ 
Sbjct: 68  ML--DDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAG 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++  E A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 306 KIRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPIIT 346


>gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
 gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
          Length = 308

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 151/297 (50%), Positives = 211/297 (71%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  ++  + RL D  ++++LA E  D  +  E       ++ +V   + + LL+G+ D+ 
Sbjct: 1   MEQLESFRRRLDDLEVMIDLAEEASDAEMAAEARAEADALEEQVRQFELQVLLNGKYDAY 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A L +HAGAGGTE+QDWA MLLRMY RWAE+R FK E L+  DG+EAGIKS T+ ++GP
Sbjct: 61  NAILTIHAGAGGTEAQDWAEMLLRMYVRWAERRGFKVEELDRLDGDEAGIKSVTIAVRGP 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYR 234
            AYG+L+ E GVHRLVRISP+D++ RRHTSF+++ V P ++D + +IEI   D RIDT+R
Sbjct: 121 YAYGFLRPEMGVHRLVRISPFDASGRRHTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTFR 180

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVN T+SAVRITH+PTG+VV CQQERSQ +N+A A  MLR+KL EL+++++ +
Sbjct: 181 SSGAGGQHVNKTESAVRITHLPTGIVVSCQQERSQMQNRAVAMMMLRSKLVELKIEEQNK 240

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                   + EI WG QIRSYV QPY +VKD R+ +E  +   V+DG+LD F+   L
Sbjct: 241 EMAQIRGPQMEIAWGSQIRSYVFQPYTLVKDHRSGVEVGNAQAVIDGELDPFIYGYL 297


>gi|15807620|ref|NP_293897.1| peptide chain release factor 2 [Deinococcus radiodurans R1]
          Length = 421

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 140/344 (40%), Positives = 201/344 (58%), Gaps = 6/344 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW +   A+ + +E   +   +     +        
Sbjct: 69  GSTFDIPGKTRRLNELDRELSDPDLWNDQSRARQVTQEAGSVRKIVEEYAGLTSDAQGLS 128

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +L+LA         +   D    ++  V+    E+L + +     A + V  GAGGTE+
Sbjct: 129 EMLDLAD----EEERELLEDEQAGLQKRVDDLYRETLFTMKHADTAAIVRVKGGAGGTEA 184

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   G++AG +S   +I+G  A+G +  E GVHRL
Sbjct: 185 QDWAGMLARMYMRWAERRGYKVDILDEVAGDQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 244

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+DSN+RR TSF+S+ V P   ++ I I I +SD R D +R+ GAGGQ VNTTDSA
Sbjct: 245 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 304

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KRE         + ++ WG
Sbjct: 305 VRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMKKREAEELAARGQQAKVEWG 364

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            Q+RSYVL   Q +KD RT +   +P DVLDGDLD+ M A L  
Sbjct: 365 SQMRSYVL-DKQYIKDHRTGLMMHNPDDVLDGDLDELMWAGLEW 407


>gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|166223550|sp|A7G9P2|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576659|sp|B1IE21|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str.
           230613]
 gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
          Length = 358

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/342 (36%), Positives = 190/342 (55%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+  E
Sbjct: 8   IENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEMLKE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++ + L++E  + E     L     D  D ++E+ AGAGG E+  +A
Sbjct: 68  ESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVHR+ R+ 
Sbjct: 128 SNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I I+ +D RID YRASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDININANDLRIDVYRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R         S+   G    +IR
Sbjct: 247 LPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 307 TYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
 gi|238692456|sp|B3PJP4|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
          Length = 360

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 177/342 (51%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   ++    +  +  N    + L +E   L+  +   K     L D      L
Sbjct: 9   LERLKERYEEVSALLSEADVINNQARFRDLSKEYAELEPVVVAYKGYLQLLADIEEAKHL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L+  +  +E  + E     L     D  + YLEV AG GG E+ 
Sbjct: 69  IAE-GDADMREMAEEELEGCEARLEPTELELQKLLLPKDPNDEKNCYLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE + ++ E L   +GE  G K    L+ G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLVSGSGVYSKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+  E+ I+++D RIDTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV+CQ ERSQHKN+A+A ++L  KL  ++  +     +I E  +  +G G  
Sbjct: 248 ITHIPTGIVVECQDERSQHKNRARAMSLLATKLKTMQ--EEAAHKSISEERRNLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+   S   V+ GDL+  +   
Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYSLDAVMQGDLEPVIGPL 346


>gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
 gi|259585216|sp|C3KYH5|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
          Length = 358

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/342 (36%), Positives = 190/342 (55%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+  E
Sbjct: 8   IENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEMLKE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++ + L++E  + E     L     D  D ++E+ AGAGG E+  +A
Sbjct: 68  ESDKDLREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVHR+ R+ 
Sbjct: 128 SNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I I+ +D RID YRASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDININANDLRIDVYRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R         S+   G    +IR
Sbjct: 247 LPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 307 TYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|13431785|sp|P57852|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 360

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 188/345 (54%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            ++  +R   L     +  +  +  + +   +E   L++ +       ++   + +  +L
Sbjct: 9   LESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNSNMEEAQLL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD S+ +   + ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 69  L------DDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE +++K E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 123 EAGIFAGDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDS
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+       +    G 
Sbjct: 243 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGSGD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 303 RSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|149277162|ref|ZP_01883304.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
 gi|149232039|gb|EDM37416.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
          Length = 324

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 141/324 (43%), Positives = 209/324 (64%), Gaps = 2/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
            T  P  W +  +A+  +             + +  +L D  ++ +     D  +  +E 
Sbjct: 1   MTLQPGFWDDPKKAEKHLAAINSKKVWTDAWQVVNAKLEDTEVMFDFLQAGD--ATAEEM 58

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +        +E  + +++LS + D   A +++ AGAGGTES DWA ML+RMY  W EK 
Sbjct: 59  QEQYDECLALIEALELKNMLSSKEDQLHAVMQITAGAGGTESCDWAAMLMRMYIMWGEKN 118

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K    +  +GE AG+KS TL   G  +YG+LKGE GVHRLVRISP+DSN+RRHTSF+S
Sbjct: 119 GYKVTEQDYQEGEVAGVKSVTLQFAGDFSYGYLKGENGVHRLVRISPFDSNARRHTSFAS 178

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+VDD+IEIE+ +S+   +T+R+ GAGGQ+VN  ++AVR+ H P+G+V++ Q+ RS
Sbjct: 179 VYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIVIKNQESRS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK  A  +L+++LYE E++KR E     E SK +I WG QIR+YVL PY++VKDLRT
Sbjct: 239 QLQNKENAMRLLKSQLYEAEMRKRMEATAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N E ++   VLDG+L++F+KA L 
Sbjct: 299 NYETSNAQGVLDGELNEFLKAYLM 322


>gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
 gi|226739103|sp|B8E003|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
          Length = 367

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 189/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +        +  +  + + L++ER  ++  +   +E +  L +   L E+
Sbjct: 10  LEEIEKRFEEIEGLLAKEDVISDFNKYQSLLKERAKIEEIVDKFREYKRLLKEKEDLEEM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +       L+ I+ ++E  +FE     L     D  +  +E+ AG GG E+ 
Sbjct: 70  VKEEQDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEIRAGTGGEEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K+ +K E +  +     G K    +++G  AY  LK E GVHR+ 
Sbjct: 130 LFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRLKFESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P + + IE+EI   D RI+T+R+ GAGGQHVN T+S VR
Sbjct: 190 RVPITESSGRIHTSTATVAVLPEM-EEIEVEIDPKDLRIETFRSGGAGGQHVNKTESGVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VVQCQ ERSQH+N+ +A  +LRA+LYE    +RE+   I    + ++G G  
Sbjct: 249 ITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEY--YQREKENEIASQRRQQVGTGER 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P + V D R N       +VL G+LD+F+   +  +K
Sbjct: 307 SEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEK 352


>gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
 gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
          Length = 362

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 188/341 (55%), Gaps = 7/341 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +    + L +E   L+      +  Q    D +  
Sbjct: 6   LVKLETLVERYEEVQHLLGDPSVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGT 128
            E+A E DD  + +   + ++  K E+E    + + LL      D  + ++E+ AGAGG 
Sbjct: 66  EEMAQE-DDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AE+R ++ E +  +  E+ G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR  E A+   +      
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRNAEEASTRRNLLGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              +IR+Y   P   V D R  +     ++V++GDLD  ++
Sbjct: 305 RSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQ 344


>gi|253581892|ref|ZP_04859116.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
 gi|251836241|gb|EES64778.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
          Length = 328

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 150/327 (45%), Positives = 216/327 (66%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
            T +   W +   +  +++E       I+  K+++  + +  +L++   E  +     E 
Sbjct: 1   MTMEESFWNDKRSSSAVIKEMNEEKEIIAEFKKLESEVGEEEVLIDFV-EMGETDFQAEL 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +    +  ++++     LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++
Sbjct: 60  EEKHMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+K   ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S
Sbjct: 120 KYKISEMDFMPGDSVGIKSITFLVEGSNAYGYMKSEKGIHRLVRISPFDANKKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD+S+E+ +   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERS
Sbjct: 180 VEVMPEVDESVEVNVDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q  N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT
Sbjct: 240 QLNNRETAMKMLKSKLIELEMKKKEEELKKIQGEQSEIGWGNQIRSYVFQPYTLVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355
             E  +   V+DGD+D F+   L   K
Sbjct: 300 AAESGNIKAVMDGDIDIFINTYLRWNK 326


>gi|28493165|ref|NP_787326.1| peptide chain release factor 2 [Tropheryma whipplei str. Twist]
 gi|28572722|ref|NP_789502.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28410855|emb|CAD67240.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28476205|gb|AAO44295.1| peptide chain release factor RF-2 [Tropheryma whipplei str. Twist]
          Length = 376

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 143/354 (40%), Positives = 213/354 (60%), Gaps = 5/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ +  + +  +       +R++ L  +  DP LW     A+ + RE       +  +  
Sbjct: 12  EIEKTFSEITSVVSPVLLSKRIAELTARVSDPDLWTTPDRAQQIARELSITKAQLDRLTN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +L +  +L+ L   E D  +L E S   + +  E  +   +++L+ E D   A L +
Sbjct: 72  LEAQLDEMRVLVTLLENEHDAGLLDEGSRKAKLLLEEANHLLIQNMLNNEYDCYPAVLTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWA+K   +   ++I   EEAGI+SATL I  P A+G L
Sbjct: 132 RAGAGGIDAADFAQMLLRMYIRWAQKHSSEAIVMDISYAEEAGIRSATLRIDLPFAFGKL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+++  +RHTSF+++ V P++++   IEI+  + RID +R+SG GGQ
Sbjct: 192 HQESGTHRLVRISPFNAAGKRHTSFAAVEVIPLLEEVSSIEITNDEIRIDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+  A  +LRA+L    L KR+E A I + 
Sbjct: 252 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRESAMRILRARLL---LNKRQEEAAIRKE 308

Query: 302 SKTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               I   WG Q+R+YVL PYQ+VKDLR+  E + P  V DGD+D F+ A +  
Sbjct: 309 LAGNIVASWGEQVRNYVLAPYQLVKDLRSLHESSMPDKVFDGDIDGFIDAGIKW 362


>gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
 gi|254790873|sp|C1FQ97|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 358

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/342 (36%), Positives = 189/342 (55%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+  E
Sbjct: 8   IENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEMLKE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++ + L +E  + E     L     D  D ++E+ AGAGG E+  +A
Sbjct: 68  ESDKELREMAQEEIKELTLRLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVHR+ R+ 
Sbjct: 128 SNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I I+ +D RID YRASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDININANDLRIDVYRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R         S+   G    +IR
Sbjct: 247 LPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 307 TYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|163803585|ref|ZP_02197452.1| peptide chain release factor 1 [Vibrio sp. AND4]
 gi|159172627|gb|EDP57484.1| peptide chain release factor 1 [Vibrio sp. AND4]
          Length = 362

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 185/343 (53%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D     ++
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTQCFQAYQQAQDDLAAAEDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDEEMREMAQEEIKEAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTLAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDLQSLIDPVV 347


>gi|306840415|ref|ZP_07473178.1| peptide chain release factor 2 [Brucella sp. BO2]
 gi|306289615|gb|EFM60824.1| peptide chain release factor 2 [Brucella sp. BO2]
          Length = 292

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 192/280 (68%), Positives = 238/280 (85%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  EE D SI+++    ++ +K E++ +Q + LLSGEAD+ND YLEVHAGAGGTESQDWA
Sbjct: 1   MGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEVHAGAGGTESQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMYTRWAE+   K E +E+H+GEEAGIKSAT+L+KG N+YG LK E GVHRLVRIS
Sbjct: 61  SMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLKTESGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           PYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQHVNTTDSAVRITH
Sbjct: 121 PYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           I TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE  +   ++KT+IGWG QIRS
Sbjct: 181 IATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANATKTDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YVLQPYQ+VKDLRT +E T+P +VLDG +  FM+A LA +
Sbjct: 241 YVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 280


>gi|226324356|ref|ZP_03799874.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
 gi|225206804|gb|EEG89158.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
          Length = 313

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 149/309 (48%), Positives = 212/309 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + + + +  +++++    D   L+EL  EE+D  +++E    + + + E E  +  
Sbjct: 1   MKELRKMQDCVKEVRDLESSYEDINALIELTEEEEDREMIKEIQREIAKFEKEFEDLRIR 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DS +A + +HAGAGGT+S DWANML RMYTR+A+ + F+   L+  DG+  G+
Sbjct: 61  TLLSGEYDSCNAIVTLHAGAGGTDSCDWANMLYRMYTRYAQSKGFQITVLDYQDGDITGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  + G NAYG+ + E+GVHRLVRISP++S  +R TSF+S  V P ++D I+IE+++
Sbjct: 121 KGITFEVTGDNAYGYFQSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEDDIDIELND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ  NK +A  ML+AKLY
Sbjct: 181 DDLRIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQLFNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++EE  +       +I +G QIRSY+L PY +VKD RT  E  + S VLDG+LD 
Sbjct: 241 LLKKQEQEEKVSGIRGEVQDINFGSQIRSYILHPYNLVKDHRTGEETGNVSAVLDGELDP 300

Query: 346 FMKATLAIK 354
           F+ A L  +
Sbjct: 301 FINAYLKQR 309


>gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|229470350|sp|B2A3J0|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 357

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 192/350 (54%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   L     DP +  +  + K   +E   L+  ++  ++  +   +   
Sbjct: 1   MLDKLEGIEKRYQELEDLMSDPEVINDPEKLKQYSKEHASLEEIVNKYRQYLETKQEFEE 60

Query: 72  LLELALE-EDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAG 126
             E+  E ++D  + +   D + R++ +++      +   L     D  +  +E+ AGAG
Sbjct: 61  AKEMLEENDEDPDMEEFLKDEIPRLENQMQEIYDSLKILLLPKDPNDEKNVIVEIRAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE   +KTE ++ H+ +  G K    +I+G NAY  LK E G
Sbjct: 121 GDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMIEGKNAYSRLKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S+ R HTS +++ V P   + +EIEI  ++ RIDT+ A+G GGQ VNTT
Sbjct: 181 VHRVQRVPSTESSGRIHTSTATVAVLPEA-EDVEIEIDTNELRIDTFCATGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITH PTGVVV CQ E+SQHKN+ +A  +LRA++Y++ L+++++       S+   
Sbjct: 240 QSAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYLEEQQQQEAEERKSQVGS 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   + D R N        VL+G++D+ + A +  ++
Sbjct: 300 GDRSERIRTYNF-PQGRITDHRINFTTHRLEQVLEGEIDELIDALITTEQ 348


>gi|182420270|ref|ZP_02951499.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237666557|ref|ZP_04526542.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182375865|gb|EDT73457.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237657756|gb|EEP55311.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 360

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 133/351 (37%), Positives = 197/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D  +    +   L+ K  DP + QN  E + L +E   L+  ++  KE +    D   
Sbjct: 2   LLDKLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYKEYKKVTEDLEA 61

Query: 72  LLELALEEDDCSILQETSDNLQRI-KLEVE---YKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  EE+D  + +  S+ +  + K EVE   + Q   L     D  + ++E+  GAGG
Sbjct: 62  NKEMLSEENDKEMREMLSEEISDLTKREVELENHIQILLLPKDPNDDKNVFVEIRGGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE +++  E + +++ +  G K    +IKG  AY  LK E GV
Sbjct: 122 EEAALFAYNLFRMYTRYAETQRWAVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS S++ V P V D +EIEISE D RID +RASG GGQ VNTTD
Sbjct: 182 HRVQRVPDTESSGRIHTSTSTVAVLPEV-DDVEIEISEKDLRIDVFRASGNGGQCVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQ KNK +A  +L+++LY  E  +RE    I E  K+++G
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAEGIAEDRKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        L+GD+D+ + A +   +
Sbjct: 299 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLETFLNGDIDEMINALITADQ 348


>gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688740|sp|B1KSR1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 358

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 190/342 (55%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+  E
Sbjct: 8   IENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEMLKE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++ + L++E  + E     L     D  D ++E+ AGAGG E+  +A
Sbjct: 68  ESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVHR+ R+ 
Sbjct: 128 SNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I I+ +D RID YRASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDININANDLRIDVYRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R         S+   G    +IR
Sbjct: 247 LPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 307 TYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQ 347


>gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
 gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
          Length = 362

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 187/346 (54%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +  + + L +E   L+      +  Q    D    
Sbjct: 6   LVKLETLVERYEEVQHLLGDPDVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQDDLEAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGT 128
            ++A E DD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG 
Sbjct: 66  EDMAQE-DDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AEK+ ++ E +  +D E+ G K     + G   YG +K E G H
Sbjct: 125 EAGIFAGNLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI  +D +IDT+RASGAGGQHVNTTDS
Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G 
Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     ++VL+GD+   +   L
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTLYRLNEVLEGDMQSLIDPVL 347


>gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 361

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RIPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens
           MBEL55E]
 gi|61214602|sp|Q65TB1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 360

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 183/342 (53%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L+  +      +  L  N+   EL
Sbjct: 9   LDSLNERYEELEALLGDASVISDQDKFRAYSKEYSQLEEVVKTFSRWKQ-LNSNIEEAEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +     ++  K E+E    + Q   L     D  +AYLE+ AG GG E+ 
Sbjct: 68  LL--DDPEMKEMAQMEIEESKNELEEVEQHLQILLLPRDPNDEYNAYLEIRAGTGGDEAG 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++ E L  ++ E+ G K    L+ G N YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEMKRWRVEVLSENESEQGGYKEIIALVSGDNVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A  +L ++L + E  K   E A    +         
Sbjct: 246 ITHIPTGMVVECQDERSQHKNKAKALAVLASRLVQAEQDKLAAEQATTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 306 KIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009371|ref|ZP_02274302.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312095|ref|ZP_06802908.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|119361542|sp|Q2A1Q0|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361543|sp|Q0BKE8|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223558|sp|A7NE96|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223560|sp|A4IWC1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 361

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|90417430|ref|ZP_01225354.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
 gi|90330764|gb|EAS46039.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
          Length = 310

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 161/309 (52%), Positives = 220/309 (71%), Gaps = 1/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + RER  L+  +  I+++   + D+  LL +A+EEDD   + +    +  ++ ++   +F
Sbjct: 1   MGRERSALEAVVKTIEDLDTGVADSRELLAMAVEEDDADTVADVETEIAALEAQLAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RWA+ + FK E +E   G+ AG
Sbjct: 61  RRMFSGEMDPNNAYLDIQSGSGGTEAQDWAEMLLRMYLRWADDKGFKAELVECSAGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK AT+ I G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+
Sbjct: 121 IKGATVQISGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVYVSPEIDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            SD R DTYRASGAGGQH+N TDSAVR+TH P+G+VVQ Q +RSQH+N+ + W MLRAKL
Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQSQSQRSQHQNRDKCWQMLRAKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELE+  R++ A   E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD
Sbjct: 241 YELEVSIRQKAAQATEDTKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTGAVLDGKLD 299

Query: 345 DFMKATLAI 353
            F+ A+L  
Sbjct: 300 QFIVASLKA 308


>gi|269123112|ref|YP_003305689.1| peptide chain release factor 2 [Streptobacillus moniliformis DSM
           12112]
 gi|268314438|gb|ACZ00812.1| bacterial peptide chain release factor 2 (bRF- 2) [Streptobacillus
           moniliformis DSM 12112]
          Length = 362

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 160/321 (49%), Positives = 218/321 (67%), Gaps = 2/321 (0%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             +++  +++ +++E   L   I  I ++     +  ILLE   +E+             
Sbjct: 44  GFYKDQNKSQNVLKEISLLKERIKDISKLLTLNENIQILLEFYKQEEISLEEL--ETETL 101

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
               E++  + + LL+G+ D N A L ++AGAGGTES DW +ML RMY RWA + KFK E
Sbjct: 102 EFIKELDKFKIKLLLNGKYDKNSAILTINAGAGGTESCDWVSMLYRMYDRWAMQNKFKVE 161

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L+I  G+EAGIKS TL IKG  AYG+L  E+GVHRLVRISP+DSN+RRHTSF+++ V P
Sbjct: 162 VLDILAGDEAGIKSITLSIKGDYAYGYLDCEKGVHRLVRISPFDSNARRHTSFAAVNVIP 221

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            ++D +E+ + + D +IDTYRASGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ+KN 
Sbjct: 222 EIEDDVEVNLKKEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVICQNERSQNKNL 281

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  +LRAKL+E+EL+ RE   N  +  +++I WG QIRSYV QPY+MVKD RTN E+ 
Sbjct: 282 NSAMKVLRAKLFEIELKNRENEINDLKGVQSKIEWGSQIRSYVFQPYKMVKDHRTNHEEN 341

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DGD++ F+   L I+
Sbjct: 342 NVDKVMDGDINIFIDEYLKIR 362


>gi|298497806|ref|ZP_07007613.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
 gi|297542139|gb|EFH78189.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
          Length = 362

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 186/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR   A I ++ +  +G    
Sbjct: 248 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSRDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +     ++V++GD+   +   +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRIILTVYRLTEVMEGDMQSLIDPVI 347


>gi|225175858|ref|ZP_03729851.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
 gi|225168782|gb|EEG77583.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
          Length = 356

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      +R   L     DP +     E + L +E   L   ++  +E Q    D   
Sbjct: 1   MFDKLKATEERFDELEKLISDPEVIARQDEWRKLTKEHSRLSEVVNAYREYQQVEQDLAE 60

Query: 72  LLELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +      E + N ++ +   E  +   L     D  +  +EV AG GG
Sbjct: 61  AKEMLRDGGDEEMSRFLKDEITANTEKKEELTEKLRLLLLPRDPNDDKNVIVEVRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE++ +KTE L+ ++ +  G K     I+G  AY  LK E GV
Sbjct: 121 DEAALFAGDLFRMYTRYAERQGWKTEVLDANETDIGGFKEVVFAIEGDGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++I+++D RID + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLPEA-EDVEVDINQNDLRIDVFCSSGPGGQSVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQHKNK +A  +LRA+L+  E  + E  A    + KT++G
Sbjct: 240 SAVRITHLPSGIVVSCQDEKSQHKNKDKAMRVLRARLF--EKAQEEAAAEQAAARKTQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        LDGDLD+ + A +  ++
Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRIGMTLYKLDQFLDGDLDEMVDALITSEQ 347


>gi|254785320|ref|YP_003072749.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
 gi|242667502|gb|ACS93539.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
          Length = 300

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/297 (53%), Positives = 215/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I+ +   + D   L++LA+EE+D   L++    +  ++ ++   +F  + SGE D+N
Sbjct: 2   VETIENLDHGVTDCRDLIDLAVEENDEDSLEDVQSEIDSLEAQLAILEFRRMFSGEMDAN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT   E   GE AGIKSAT+  +G 
Sbjct: 62  NAFLDIQSGSGGTEAQDWAEMILRMYLRWGEDKGFKTTLEEASAGEVAGIKSATIRFEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD IEI+I+ +D R+DTYRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEIDDDIEIDINPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQH N+ +A  MLRA++YE E+ KR   
Sbjct: 182 SGAGGQHVNKTDSAVRITHEPTGIVVQCQSERSQHSNRDKAMKMLRARMYEHEILKRNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E SK++IGWG QIRSYVL   Q +KDLRT I+ ++   VLDG LDDF++A+L 
Sbjct: 242 KQALEDSKSDIGWGSQIRSYVLDD-QRIKDLRTGIQTSNCQAVLDGKLDDFIEASLK 297


>gi|241667853|ref|ZP_04755431.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 361

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    + ++  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKEAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E      Q   L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    +    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLI 347


>gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1]
          Length = 361

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQTAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|300853434|ref|YP_003778418.1| peptide chain release factor 1 [Clostridium ljungdahlii DSM 13528]
 gi|300433549|gb|ADK13316.1| peptide chain release factor 1 (RF-1) [Clostridium ljungdahlii DSM
           13528]
          Length = 357

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  +  E + L +E   L+  ++  +E +    +     E+  E
Sbjct: 8   IENKYEELSIKISDPQVMADQKEWQKLCKENAELEEIVTKYREYKKAQQELEDNKEMLKE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++R+   +E  +       L     D  + ++E+ AGAGG E+  +A
Sbjct: 68  ETDREMKEMEQEEIKRLTEVIEESENDLRVLLLPKDPNDDKNVFVEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++ +  E + I+  +  G K    ++KG  AY  LK E G HR+ R+ 
Sbjct: 128 ANLTRMYTRYAERQAWNIETMSINATDIGGFKEIVFMVKGKGAYSRLKYESGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D +++ I+ +D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDVVINPNDIRIDVFRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV CQ E+SQ KNK +   +L+++LY  E  ++E  A+I E  K+++G G    +
Sbjct: 247 LPTGLVVSCQDEKSQLKNKEKGMKVLKSRLY--ERAEKERSASIAEDRKSQVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +        LDG++D+ + A +   +
Sbjct: 305 IRTYNY-PQGRVTDHRIGLTLYKLDSFLDGNIDEIIDALITADQ 347


>gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456401|ref|ZP_03664874.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|61214577|sp|Q5NIA8|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361541|sp|Q14JR1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct]
 gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 361

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   K+    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKKYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|210623300|ref|ZP_03293717.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
 gi|210153701|gb|EEA84707.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
          Length = 355

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 184/342 (53%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
                  L  K  DP +  +    +  M+E   L+  I   +E +  L       E+  E
Sbjct: 8   LEDTYKDLTEKISDPEIINDQKVWQKYMKEHADLEPIIMKYREYKAVLDAIAESKEILQE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +     L  ++ +VE  + E     +     D  +  +E+  GAGG E+  +A
Sbjct: 68  ESDEELRELAKMELSDMESQVEPLEEELKLLLVPKDPNDEKNVIVEIRGGAGGDEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE++ +K   L  ++    G K  + +IKG  AY  LK E GVHR+ RI 
Sbjct: 128 GDLLRMYSRYAERKGWKVSMLSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +E+EI+++D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 188 STESGGRIHTSTATVAVLPEV-EDVEVEINDNDIRIDVFRASGNGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIR 313
           +PTG VV CQ E+SQ KNK +A  +L+A+LY+  L  +++EI+   +S         +IR
Sbjct: 247 LPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDRALADQQKEISAERKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+        LDGD+D+ + A + + +
Sbjct: 307 TYNF-PQGRISDHRINLTLYKLDSFLDGDIDEMIDALITVDQ 347


>gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549]
          Length = 361

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALKDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|251792904|ref|YP_003007630.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534297|gb|ACS97543.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
          Length = 289

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 162/288 (56%), Positives = 212/288 (73%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E +D +   E    L  ++ ++   +F  + SGE D+ D Y+++ AG+
Sbjct: 1   MEDVDGLLELAVEAEDEATFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E 
Sbjct: 61  GGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++
Sbjct: 181 TESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287


>gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG]
 gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG]
          Length = 361

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola sp. JR]
 gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR]
          Length = 355

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 179/345 (51%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++   L+    DP +  +  + +   +    L   +S  +E +  L       EL
Sbjct: 5   LQSLEEKYEELSKLIADPEIIADQSQWQRHAKAHAALTEIVSTYREYKSVLKGIDEAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D    +     L  +K + E      +   L     D  +  +E+  GAGG E+ 
Sbjct: 65  LKDQLDSEFREMVEQELAELKEKEEKLSVQLKILLLPKDPNDEKNVIMEIRGGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE L  +  +  G K    LI+G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGFKEIIFLIEGQGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + ++++I  +D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RVPTTESSGRIHTSTVTVAVLPEA-EEVDVDIDPNDLRIDVFCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV CQ E+SQHKNK +A  +LRA+L +  + ++R ++A+  +S         
Sbjct: 244 VTHIPTGIVVSCQDEKSQHKNKEKALRVLRARLLDKAQEEQRNQLASTRKSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VL+GDLD+ ++A +   +
Sbjct: 304 RIRTYNF-PQGRVTDHRIGLTLHKLDMVLEGDLDEIIEALITTDQ 347


>gi|153007050|ref|YP_001381375.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
 gi|166223527|sp|A7HI45|RF1_ANADF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152030623|gb|ABS28391.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
          Length = 372

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/340 (35%), Positives = 189/340 (55%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L     DP +  N    + + +ER  L+  +  ++  +  + D     E 
Sbjct: 10  LEAIEQRFEELTALLSDPSVASNGDRFRKVSKERASLEPTVEALRAYRKLVTDIGD-NEA 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEE D  + +   + L +++ +V    E  +   +    AD  D  LE+ AGAGG E+ 
Sbjct: 69  LLEEKDPDLREMAKEELAQLRPQVDPAEEQLKLYLVPKDPADEKDVILEIRAGAGGDEAG 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+R ++TE  +   G   G+K  T+ I G + Y WLK E GVHR+ 
Sbjct: 129 LFAAELLRMYLRYAERRGWRTEVADTSAGNLGGVKDVTVNIAGDSVYSWLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + I+I++S +D  +D +R++G+GGQ VNTTDSAVR
Sbjct: 189 RVPATEAQGRIHTSTVTVAVMPEA-EDIDIQVSPADIEMDVFRSTGSGGQSVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH PTG++V+CQQE+SQ KN+  A  MLRAKLYE+EL+++    +    S+   G    
Sbjct: 248 LTHKPTGIIVKCQQEKSQLKNRNMAMRMLRAKLYEIELERQRSARDAARKSQVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 308 KIRTYNF-PQDRLTDHRINYTRHNLPAVMDGDVQDVIDAC 346


>gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619]
 gi|229470352|sp|B1JEP6|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619]
          Length = 360

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 181/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   KE +    D      L
Sbjct: 9   LDTLQDRFEELTALLGDAEVISDQARFRAYSREYSEVEPVIGAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDA-DPDMREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+ + IEI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +  IA+  +          
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLA 348


>gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
 gi|166223548|sp|A7FQG2|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223549|sp|A5HY35|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
          Length = 358

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 190/342 (55%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+  E
Sbjct: 8   IENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEMLKE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +   + ++ + L++E  + E     L     D  D ++E+ AGAGG E+  +A
Sbjct: 68  ESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVHR+ R+ 
Sbjct: 128 SNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P V D ++I I+ +D RID YRASG GGQ VNTTDSAVRITH
Sbjct: 188 DTESSGRIHTSTATVAVLPEV-DDVDININANDLRIDVYRASGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV CQ E+SQ KNK +A  +L+A+L+E    +R         S+   G    +IR
Sbjct: 247 LPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 307 TYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQ 347


>gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 355

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   ++   +      P +  +    +   +    L   +   +E +    D      +
Sbjct: 5   LDKLEEKFEEITALLSQPEVIADQARFQKYAKAHAELSELVDTYREYKRVRQDKTDARAM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  +     + ++ +  + E  +             D  +  +E+ AG GG E+ 
Sbjct: 65  LEEEEDDDLRNMLVEEIRVLSDKEEKLEQRLKLLLLPKDPNDEKNVIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ +K + ++    +  G K    +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIVEGRGAYSKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +E++I+ +D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RIPVTESGGRIHTSAATVAVLPEA-EEVEVDINPNDLRIDVFCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNK +A  +LR++L  LEL++ E  A I ++ ++++G G  
Sbjct: 244 ITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRL--LELKRAEHEAEIADARRSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       VL+G+LD+ ++A +   +
Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLHKLDVVLEGELDEIIEALITHDQ 347


>gi|254304309|ref|ZP_04971667.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324501|gb|EDK89751.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 308

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 152/303 (50%), Positives = 212/303 (69%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++   E  + S   E S+  + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFV-ESGETSFENELSEKHKILKSDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKAYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELEL+K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida U112]
 gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
 gi|166223559|sp|A0Q844|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112]
 gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
          Length = 361

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A  ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMLMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
          Length = 361

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANETIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|121996859|ref|YP_001001646.1| peptide chain release factor 2 [Halorhodospira halophila SL1]
 gi|121588264|gb|ABM60844.1| bacterial peptide chain release factor 2 (bRF-2) [Halorhodospira
           halophila SL1]
          Length = 291

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 161/289 (55%), Positives = 214/289 (74%), Gaps = 2/289 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   ++ +A EE D   L+    ++QR+  +VE  +F  + SGE D+++A+L++ AG+
Sbjct: 2   LDDADEMVAMAREEGDAETLEAVQADIQRVAGQVETLEFRRMFSGEMDTSNAFLDIQAGS 61

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA MLLRMY RWAE R F+TE +E+  G+EAG+KSAT+ + G  A+GWL+ E 
Sbjct: 62  GGTEAQDWAEMLLRMYLRWAEARGFETEVIEVTAGQEAGVKSATIKVSGEYAFGWLRTET 121

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVN 244
           GVHRLVR SP+DS  RRHTSFSS++V P +D ++++IEI  SD R+D +RASGAGGQHVN
Sbjct: 122 GVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDEENVDIEIDPSDLRVDVFRASGAGGQHVN 181

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT+SAVRITH PTG+VVQ Q +RSQHKN+A A + LRAKLYELE+Q+R   A   E +K+
Sbjct: 182 TTESAVRITHEPTGIVVQSQNDRSQHKNRATAMSQLRAKLYELEMQRRRAEAEAQEDTKS 241

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 242 DIGWGNQIRSYVL-DQSRIKDLRTGVEIGNTQAVLDGHLDPFIQASLKA 289


>gi|59711375|ref|YP_204151.1| peptide chain release factor 1 [Vibrio fischeri ES114]
 gi|197334513|ref|YP_002155529.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
 gi|75431754|sp|Q5E6T3|RF1_VIBF1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690273|sp|B5FBX0|RF1_VIBFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59479476|gb|AAW85263.1| peptide chain release factor RF-1 [Vibrio fischeri ES114]
 gi|197316003|gb|ACH65450.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
          Length = 362

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 187/343 (54%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L RE   L+      +  +    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQNKFRALSREYSQLEEVTQCFQAYEQAQEDLVAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDEEMREMAQEEIKDAKEAIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGNLFRMYSRFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGEGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A ++L A++  ++ ++    A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMSVLAARI--IQAEEARRAAAVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+     ++V++GDL   ++  +
Sbjct: 306 SDRIRTYNY-PQGRVSDHRINLTVYRLNEVMEGDLGCLIEPVV 347


>gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
 gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
          Length = 361

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEVGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    S    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLV 347


>gi|254513973|ref|ZP_05126034.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
 gi|219676216|gb|EED32581.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
          Length = 280

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 152/278 (54%), Positives = 205/278 (73%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE+D + + +    +Q +   +E  +F  + +GE D+N+A+L++ +G+GGTE+QDWA
Sbjct: 1   MASEENDEAAVSDLELEIQGLLKVLELLEFRRMFNGEMDANNAFLDIQSGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E R F TE +E   G+ AGIKSAT+   G  A+GWL+ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGESRGFTTELIEASGGDVAGIKSATIKFSGEYAFGWLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH
Sbjct: 121 PFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            P+G+VVQCQ ERSQH+N+  A  +LR KLYE+E+ KR     + E +K +IGWG QIRS
Sbjct: 181 NPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEVLKRNAEKQVMEDNKADIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRTN+E ++   VLDG +D F++A+L 
Sbjct: 241 YVL-DASRIKDLRTNVETSNTQAVLDGAIDQFIEASLK 277


>gi|323496829|ref|ZP_08101866.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
 gi|323318088|gb|EGA71062.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
          Length = 362

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDEEMREMAQEEIKEAKDAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR    +    +    G    
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLLGSGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++GD+   +   +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVI 347


>gi|258616656|ref|ZP_05714426.1| peptide chain release factor 2 in translation [Enterococcus faecium
           DO]
          Length = 246

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 149/243 (61%), Positives = 186/243 (76%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  ++ E L+   G+EAGIKS TL
Sbjct: 1   PYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTL 60

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           LIKG NA+G+LK E+GVHRLVRISP+DS  RRHTSF S+ V P +D++I+IEI+  D +I
Sbjct: 61  LIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKI 120

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYRASGAGGQH+N T+SAVRITH+PTG VV  Q +RSQ KN+ QA  ML+AKLY+LE++
Sbjct: 121 DTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVE 180

Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           K+E+ A      + EIGWG QIRSYV  PY MVKD RTN+E  +   V+DGDLD F+   
Sbjct: 181 KKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGY 240

Query: 351 LAI 353
           L +
Sbjct: 241 LKM 243


>gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166223538|sp|A4XJN1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145410112|gb|ABP67116.1| bacterial peptide chain release factor 1 (bRF-1)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 355

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 122/339 (35%), Positives = 183/339 (53%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLEL 75
             ++   L  K  DP +  N  E + LM+E  +L   +   +E +     + +   LL+ 
Sbjct: 8   IEEKYLELEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYKRIIKTIEEAEELLDT 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            L+ED   +++E  +  +  K  VE   +   L     D  +  +E+ AGAGG E+  +A
Sbjct: 68  NLDEDFEKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+ 
Sbjct: 128 AELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +E+EI E D  I+T+RA GAGGQHVN T+SAVRITH
Sbjct: 188 VTESGGRIHTSTATVAVLPEV-EDVEVEIREEDLEIETFRAGGAGGQHVNKTESAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++       S+   G    +IR
Sbjct: 247 KPTGIVVSCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +       VLDGDLD+ + A + 
Sbjct: 307 TYNF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALIT 344


>gi|167032113|ref|YP_001667344.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
 gi|166858601|gb|ABY97008.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
          Length = 304

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 167/301 (55%), Positives = 220/301 (73%), Gaps = 1/301 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D + + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDENAVGDVVAELEELEENLAKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDQYLEASL 300

Query: 352 A 352
            
Sbjct: 301 K 301


>gi|229542476|ref|ZP_04431536.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
 gi|229326896|gb|EEN92571.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
          Length = 356

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   AV+ R   LN    DP +  +  + +   +E+  L   +   +E ++       
Sbjct: 1   MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              L  E+ D  +     + +  ++ ++    E  +   L     D  +  +E+   AGG
Sbjct: 61  AKSLLSEKLDPEMKDMVKEEIHELESKIPEYEERLKILLLPKDPNDEKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE + +K + +E +     G K    ++ G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYMRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++I+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEVDINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A    + K+ +G
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQQEAQAEYDANRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VLDG LD+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALI 343


>gi|323492377|ref|ZP_08097530.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
 gi|323313424|gb|EGA66535.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
          Length = 362

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  EDD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  A-NEDDEEMREMAQEEIKEAKEAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR    +    +    G    
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLLGSGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++GD+   +   +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDVASLIDPVI 347


>gi|120436153|ref|YP_861839.1| peptide chain release factor 2 [Gramella forsetii KT0803]
 gi|117578303|emb|CAL66772.1| peptide chain release factor 2 [Gramella forsetii KT0803]
          Length = 333

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 148/328 (45%), Positives = 223/328 (67%), Gaps = 2/328 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  KT  P  W +  +A+ +M+E     + +   ++ +  + D  ++ +   E  D +  
Sbjct: 1   MEEKTFAPDFWDDPKKAEQIMKEVNAEKSWVGDYEKAETLVEDLEVIYDFYKE--DEATA 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           ++      +    +E  +F+++LS E DS  A L++ AGAGGTES DWA ML+RMY  WA
Sbjct: 59  EDVQQRNDKAVELIEDLEFKNMLSEEGDSMSAVLQITAGAGGTESCDWAEMLMRMYLMWA 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EKRK+K   L    G+ AGIK+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTS
Sbjct: 119 EKRKYKIRELNYQAGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S ++YP+VDDSIEI+I+ SD   +T R+SGAGGQ+VN  ++AVR+ H PTG+V++  +
Sbjct: 179 FASAYIYPLVDDSIEIDINPSDLSWETMRSSGAGGQNVNKVETAVRLRHEPTGIVIENSE 238

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQ +NK +A  +L+++L+E+ELQK++E     E SK +I WG QIR+YV+ PY++VKD
Sbjct: 239 TRSQLENKNKAMQLLKSQLFEIELQKKQEQRREIEDSKMKIEWGSQIRNYVMHPYKLVKD 298

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +RT  E  +  DV++G++D F+K+ L +
Sbjct: 299 VRTAEETGNVDDVMNGNIDAFLKSFLMM 326


>gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
 gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
          Length = 362

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 7/344 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +  + + L +E   L++     +       D    
Sbjct: 6   LVKLETLVERYEEIQHLLGDPGILSDQNKFRALSKEYSQLEDITQCFQAYLGAKDDLEAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            E+A E DD  + +   + ++  K  +    +  Q   +     D  + ++E+ AGAGG 
Sbjct: 66  EEMAKE-DDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE+R ++ E +  +  E+ G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI+  D +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR  E A+   +      
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   V D R  +     ++V++GDLD  ++  +
Sbjct: 305 RSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDSLIQPVI 347


>gi|225019405|ref|ZP_03708597.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
 gi|224947822|gb|EEG29031.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
          Length = 361

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 119/355 (33%), Positives = 193/355 (54%), Gaps = 13/355 (3%)

Query: 10  LGGLFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +  +FD  +   +R   +N K  DP++  +    + LMRE +HL   I   +E +    +
Sbjct: 1   MADIFDKLSLTEKRFDEINEKLMDPNVVNDQHAYRDLMRELKHLTPIIDKYREYKAAKDN 60

Query: 69  NLILLELALE----EDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHA 123
                E+  E    ++   ++QE     Q+   ++ E  +   L +   D  D  +E+  
Sbjct: 61  LEEAKEMLSEGGLDKEFKEMVQEQYSESQQAIEDLGEELKILLLPTDPNDDKDVIIEIRG 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  +A  L RMYT +AE + +KTE L  ++ E  G K  +  + G  AY  LK 
Sbjct: 121 GAGGEEAALFAYNLYRMYTMYAEAKGWKTEILSANETELGGFKEVSFEVSGEGAYSRLKF 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +++ R HTS  ++ V P   + +E +I+ +D ++DT+RASGAGGQHV
Sbjct: 181 ESGVHRVQRVPETEASGRIHTSTVTVAVLPEA-EEVEFDINPTDIQVDTFRASGAGGQHV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SA+R+T++PTG+VV+CQ ERSQHKNK +A  +LR +LYE  +  +E    I    K
Sbjct: 240 NKTESAIRLTYLPTGLVVECQDERSQHKNKDKAMKILRTRLYEQAM--KEATDKIASERK 297

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++G G    +IR+Y   P   + D R  +        ++GD+D+ + A +   +
Sbjct: 298 AQVGTGDRSERIRTYNY-PQGRITDHRIGLTLYHLEQNMNGDIDEIIDALITADQ 351


>gi|113461093|ref|YP_719161.1| peptide chain release factor 1 [Haemophilus somnus 129PT]
 gi|119361547|sp|Q0I3B5|RF1_HAES1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112823136|gb|ABI25225.1| bacterial peptide chain release factor 1 (bRF-1) [Haemophilus
           somnus 129PT]
          Length = 360

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 191/340 (56%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     +P +  +  + +   +E   L++ +       + L +N+   +L
Sbjct: 9   LESLKERHEELEALLGEPSVINDQDKFRAYSKEYAQLEDVVKCFARW-NWLNNNIEETQL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            L++ D   + E      + ++E   +Q + LL      D  +AYLE+ AG GG E+  +
Sbjct: 68  LLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTGGDEAGIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+
Sbjct: 128 AGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P + ++   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 188 PKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQI 312
           HIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ +  A+   +         +I
Sbjct: 248 HIPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|315186593|gb|EFU20352.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           thermophila DSM 6578]
          Length = 357

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 125/345 (36%), Positives = 189/345 (54%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            +    R   L T   DP ++ +    + L +E  HL   +      + ++ RL +   +
Sbjct: 7   IEELTTRFKELETALADPSVFNDQKRYRELAQEHAHLSQVVRTAEHYRRLEARLEEAKTV 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGT 128
           LE   EEDD  + +   + ++ ++ E+   +   + LL      D  +  LE+ AG GG 
Sbjct: 67  LE---EEDDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAGTGGE 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE++ +K E +E  + E  G +     I G   YG L+ E G H
Sbjct: 124 EAALFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +S  R HTS  ++ V P  +++ E+EI   D R+D +R+SG GGQ VNTTDS
Sbjct: 184 RVQRIPVTESGGRIHTSAVTVAVLPEPEET-EVEIRPEDIRVDVFRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQHKNKA+A  +LRA+LYE+E  K+ + +      +++IG 
Sbjct: 243 AVRITHLPTGLVVSCQDEKSQHKNKAKALKILRARLYEME--KQRQESERAAMRRSQIGS 300

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R N+       V+DGDLD+ + A 
Sbjct: 301 GDRSERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDAL 344


>gi|254509155|ref|ZP_05121254.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
 gi|219547906|gb|EED24932.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
          Length = 362

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDIIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AKE-DDEEMREMAQEEIKEAKETIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKFAEKQGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR    +    +    G    
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLLGSGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLASLVDPVI 347


>gi|260779385|ref|ZP_05888277.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605549|gb|EEX31844.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 362

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 181/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  +  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AKE-DDAEMREMAQEEIKEAQETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ +   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG VV+CQ ERSQHKNKA+A ++L A++ + E  KR    +    +    G    
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEAKRAAEESDTRRNLLGSGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++GDL   +   +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLASLVDPVI 347


>gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
 gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
          Length = 361

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 120/343 (34%), Positives = 183/343 (53%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     +  +  +    + L +E   L++        +    D +   E+
Sbjct: 9   LETLVERYEEVEALLSEASVISDQDRFRALSKEYAELEDVSKVFNAYRQAEQDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +     D  +  K ++E      Q   L     D+N+ YLEV AG GG E+ 
Sbjct: 69  FKDE-DPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ 
Sbjct: 128 IFAGDLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVVV+CQ ERSQHKN+A+A ++L ++L + E +KR   A      +  +G G  
Sbjct: 248 ITHIPTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKR--HAEEATQRRNLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R N+     ++++ GDL   +   +
Sbjct: 306 SERIRTYNY-PQGRITDHRINLTLYKLNEIVSGDLLPIINPLV 347


>gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
 gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
          Length = 360

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 188/345 (54%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            D+  +R   L     D  +  +  + +   +E   L++ +       ++   + +  +L
Sbjct: 9   LDSLKERHEELEALLGDASVISDQEKFRAYSKEYAQLEDVVKCFARWNQLNSNIEEAQLL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD S+ +   + ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 69  L------DDLSMKEMAQEEIEECKAELEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 123 EAGIFAGDLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDS
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+       +    G 
Sbjct: 243 AVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQQQADTRRNLLGSGD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 303 RSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|84394465|ref|ZP_00993179.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
 gi|84374906|gb|EAP91839.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
          Length = 362

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 187/346 (54%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  N  + + L +E   L+      K  Q    D    
Sbjct: 6   LIKLETLVERYEEVQHLLGDPGVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQEDLEAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGT 128
            E+A  EDD  + +   + ++  K  +E    + + LL      D  + +LE+ AGAGG 
Sbjct: 66  EEMA-NEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AEK+ ++ E +  +  E+ G K     I G   YG +K E G H
Sbjct: 125 EAGIFAGNLFRMYSRFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI   D +IDT+RASGAGGQHVNTTDS
Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     ++VL+GD+   +   L
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVL 347


>gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
 gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
          Length = 355

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   L  K  DP +  +        +    L+  ++  +E +D +     
Sbjct: 1   MLDKLQALEDRYLDLEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL    DD  +++   + L+ +K ++E  +       L S   D  +  +E+  GAGG
Sbjct: 61  AEELLAAGDDEELVEMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMY R+AE R ++ E ++ +  E  G K     I G + Y  +K E GV
Sbjct: 121 DEAALFAGVLFRMYLRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++EI+ +D R+DTYRA GAGGQ+VN T+
Sbjct: 181 HRVQRVPETESQGRVHTSTVTVAVLPEA-EEVDVEINPADLRVDTYRAGGAGGQYVNKTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+V QCQ E+SQ KN+ +   +LRA++  LE  + E+ A   E  K+++G
Sbjct: 240 SAVRITHIPTGIVAQCQDEKSQLKNREKCMRVLRARI--LEQAQEEQRAATAEDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GDLD+ + A +  K+
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLHKLDSIVNGDLDELLGALITAKQ 347


>gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 360

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 183/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E + Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E  +  + A   ++ +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVE--QERQAAEQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|254284237|ref|ZP_04959205.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
 gi|219680440|gb|EED36789.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
          Length = 280

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 158/278 (56%), Positives = 204/278 (73%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  EDD   +Q  +D++  +   +E  +F  + SGE D  +A+L++ AG+GGTE+QDWA
Sbjct: 1   MAASEDDEETVQAVTDDMANLMQALEALEFRRMFSGEMDDANAFLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E R FKT  +E+  G+ AGIKSAT+  +G   +GW++ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGESRGFKTTLVEVSAGDVAGIKSATIQFEGEYPFGWIRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSF+S++V P VDD+I+IEI+ +D R+DTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFASVFVSPEVDDNIDIEINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT VV  CQ ERSQH+N+ +A   LRAKLYELE+QKR   A   E SK +IGWG QIRS
Sbjct: 181 VPTNVVASCQTERSQHQNRDRAMKQLRAKLYELEIQKRNAEAQAMEDSKADIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 YVLDDS-RIKDLRTGVETHNTQAVLDGDLDQFIEASLK 277


>gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
 gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
          Length = 360

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E + Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ ++E  +  + A   ++ +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIVQVE--QERQAAEQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+      +V++G +D+ ++  + 
Sbjct: 307 IRTYNY-PQGRITDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|190151400|ref|YP_001969925.1| peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303250479|ref|ZP_07336676.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303251821|ref|ZP_07337992.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307249121|ref|ZP_07531128.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251520|ref|ZP_07533427.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256019|ref|ZP_07537807.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262579|ref|ZP_07544210.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|238692365|sp|B3GZJ0|RF1_ACTP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189916531|gb|ACE62783.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649251|gb|EFL79436.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302650467|gb|EFL80626.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306854409|gb|EFM86605.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860984|gb|EFM92990.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865441|gb|EFM97336.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306872077|gb|EFN03790.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 360

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 183/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNSDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E + Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E  +  + A   ++ +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVE--QERQAAEQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189039973|sp|B0TX37|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 361

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    + ++  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVMAFKEYTQALEDKEAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++   + L+     +E      Q   L     D  + +LE+ AG GG E+ 
Sbjct: 69  -LNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++  +    +    G    
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLI 347


>gi|320335022|ref|YP_004171733.1| peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
 gi|319756311|gb|ADV68068.1| Peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
          Length = 363

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 221/353 (62%), Gaps = 6/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L    D     +RL+ L+ + EDP+LW +   A+ + +E   L         
Sbjct: 3   ELLEKLAALREYLDIPGKTRRLNELDKELEDPNLWNDQERARRVTQEATTLRRVTEGYAS 62

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +         +L++A + D+  +L+E   ++Q+    V+    E+L + +     A + +
Sbjct: 63  LSSDAQGLSEMLDIASD-DEKEMLEEEQASIQQ---RVDDLYRETLFTMKHSEAPAIIRI 118

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGGTESQDWA ML+RMY RWAE+R FKTE L+  DGE+AGI SA  +++G  AYG +
Sbjct: 119 KSGAGGTESQDWAGMLMRMYIRWAERRGFKTEILDQQDGEQAGITSAEFIVRGDRAYGMM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGG 240
             E GVHRLVR+SP+DSN+RRHTSF+S+ + P V +  I+I + +SD R+D YR+ GAGG
Sbjct: 179 APEHGVHRLVRVSPFDSNNRRHTSFASVDIVPEVPEEQIDIHVPDSDVRVDVYRSQGAGG 238

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG++V  Q  RSQ KN+  A+ +L+ +LY++E++KRE       
Sbjct: 239 QGVNTTDSAVRVTHLPTGLMVAIQVTRSQIKNREMAFQILKQRLYDIEVKKREAEEMKAR 298

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +  I WG QIRSYVL   Q VKD RT + +    +VLDGD++++M A L  
Sbjct: 299 GEQKAIEWGSQIRSYVL-DKQYVKDHRTGVMRHDTGNVLDGDIEEYMWAGLEW 350


>gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
 gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
          Length = 358

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 175/345 (50%), Gaps = 9/345 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  +  V R   +     DP +  +  + + L RE   L   +   +  +    +  
Sbjct: 2   AIFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEIE 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAG 126
              EL  + DD  + +   + L  ++ E     E      L     D  +  LE+ AG G
Sbjct: 62  DNRELMRD-DDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L R Y+R+AEK ++K E +   +    G K    +I G N Y  LK E G
Sbjct: 121 GDEAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS  ++ V P   + +++EI+ SD RID YRASGAGGQHVN T
Sbjct: 181 THRVQRVPETETQGRIHTSACTVAVLPEA-EEVDLEINPSDLRIDLYRASGAGGQHVNKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTE 305
           +SAVRITHIPTGVVV CQ E+SQHKNKA+A  +LR+++ + +E +K  E+A   +S    
Sbjct: 240 ESAVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRILDAMEAEKHAEMAADRKSQVGS 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                +IR+Y   P     D R  +       ++ GDLD+   A 
Sbjct: 300 GDRSERIRTYNF-PQGRCTDHRIGLTLYKLDAIMQGDLDEVFDAL 343


>gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 360

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 183/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E + Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E  +  + A   ++ +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVE--QERQAAEQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
 gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
          Length = 364

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 183/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   ++    DP +  +  + + L +E   L+  ++  +  ++         E+
Sbjct: 10  LQGLVDRHEEISALLGDPDVIGDQNKFRDLSKEYSQLEEVVNTFQRYEEAEESLKAAEEM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L+  K ++E  + E     L     D  + +LE+ AG GG E+ 
Sbjct: 70  LKDE-DPDMREMAQEELKDAKGQIELLEVEMQKLLLPRDPNDDKNTFLEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEK++++ E +   DGE  G K   + I G + Y  LK E G HR+ 
Sbjct: 129 IFAGDLFRMYSKYAEKKRWQVEVISQSDGEHGGYKEIIVRISGDSVYSHLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D +IDT+RASGAGGQHVN TDSA+R
Sbjct: 189 RVPETESQGRIHTSACTVAVMPEADELDAIEINPADLKIDTFRASGAGGQHVNKTDSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTGVVV+CQ ERSQHKNKA+A ++L+A+L   E  K +        +    G    
Sbjct: 249 ITHLPTGVVVECQDERSQHKNKAKAMSVLQARLTAAEQAKAQSEQTEMRRNLVGTGDRSD 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R N+      ++++GD+D  +   +
Sbjct: 309 RIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDIDQIVGPLI 348


>gi|134301001|ref|YP_001114497.1| peptide chain release factor 1 [Desulfotomaculum reducens MI-1]
 gi|134053701|gb|ABO51672.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfotomaculum
           reducens MI-1]
          Length = 356

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L ++  DP +  +  + + L++    L   +   ++ +    D     ++
Sbjct: 5   LQALEDRFEQLESQISDPEVMADRAKWQQLVKSHSDLAEVVDVFRQYKKAKEDLQENKQM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ +    +     ++ +  ++E ++       L     D  +  +E+  G GG E+ 
Sbjct: 65  LEDKLEPDFREMVELEIEELTSKIEEQENKLKILLLPKDPNDDKNVIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++TE ++ ++ +  G K  T +I+G  A+  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAEKKGWRTEIIDANETDLGGFKEVTFVIEGKGAFSTLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I+I+ +D RID + ASG GGQ VNTT SAVR
Sbjct: 185 RVPATESGGRIHTSAATVAVLPEA-EEVDIDINANDIRIDLFCASGPGGQCVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV CQ E+SQHKNK +A  +LRA+L +    ++++       S    G    
Sbjct: 244 ITHIPTGTVVSCQDEKSQHKNKDKAMRVLRARLLDKAQDEQQKAIAGARKSMVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +       VL GDLD+ + A +   +
Sbjct: 304 RIRTYNF-PQNRITDHRIGLTLHRLEYVLQGDLDELIDALITTDQ 347


>gi|322379487|ref|ZP_08053853.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
 gi|322380468|ref|ZP_08054667.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321147113|gb|EFX41814.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321148094|gb|EFX42628.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
          Length = 382

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 161/352 (45%), Positives = 224/352 (63%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +    +L  +  +  DP  WQ+   A    +E+  ++  +   +  
Sbjct: 25  LQNKCHNIAQIIKPEGLKVQLEQITQEQVDPAFWQDKTLAAQKNQEKMRIERLLQTYEHT 84

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L + L L EL  E  D   L +  +   ++   V+  +   +L+ + DS DA + + 
Sbjct: 85  KHTLEEALELFELIQE--DTQALTQLFEEAPKLAARVQSMEVSVMLANDQDSMDAIVSIQ 142

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTESQDWA+ML RMY RWAE++ FK E L+  +GEEAGIK    +I+G N YG++K
Sbjct: 143 PGVGGTESQDWASMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFVIRGVNVYGYMK 202

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR+SP+++N +RHTSF+S+ V P VDD I I I E D R+DTYRASGAGGQH
Sbjct: 203 NENGIHRLVRMSPFNANGKRHTSFASVQVSPEVDDDINIVIEEKDIRVDTYRASGAGGQH 262

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH  TG+VVQCQ +RSQHKNKA A  ML++KLYELEL K+ E +N     
Sbjct: 263 VNKTESAIRITHFATGIVVQCQNDRSQHKNKAMALKMLKSKLYELELCKQREQSN--MEE 320

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++IGWG QIRSYVL PYQ +KD R+ I  ++   +LDGDLD  M+  L  +
Sbjct: 321 KSDIGWGHQIRSYVLAPYQQIKDARSEIAYSNVGAILDGDLDTLMEDVLVSR 372


>gi|237807596|ref|YP_002892036.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
 gi|259585258|sp|C4LBL5|RF1_TOLAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237499857|gb|ACQ92450.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
          Length = 362

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 122/340 (35%), Positives = 186/340 (54%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P++  +  + + L RE   L   ++  ++ Q    D   + E+
Sbjct: 9   LEGLMERYEEVQALLGEPNVVSDQDKFRALTREYSQLGEVVAGFQQYQQAEADLQAIEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L   K  +E      Q   L     D ++ +LE+ AGAGG E+ 
Sbjct: 69  -LSGDDAEMKAMAQEELAEAKQLIERVEAELQVLLLPKDPKDDSNCFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY++++E+R ++ E +   DGE  G K   + ++G + YG +K E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYSERRGWRMEIMSTSDGEHGGYKEIIVRMEGDSVYGIMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +    EI+ +D RIDT+RASGAGGQH+N TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVMVLPEIPEKEIPEINPADLRIDTFRASGAGGQHINKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ ERSQHKNKA+A ++L A+L + E  KR   A+    S    G    
Sbjct: 248 ITHIPTGTVVECQDERSQHKNKARAMSVLAARLAQQEEDKRRAEADSTRRSILSTGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+     S+V++GDLD  +K  
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLSEVMEGDLDSLLKPL 346


>gi|85059968|ref|YP_455670.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
 gi|84780488|dbj|BAE75265.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
          Length = 289

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 167/288 (57%), Positives = 208/288 (72%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+ EDD     ET   L  ++ ++   +F  + SGE DS D Y+++ AG+
Sbjct: 1   MEDVAGLLELAVGEDDEETFLETQAELDGLEAKLGQLEFRRMFSGEYDSADCYVDIQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKS T+ + G  AYGWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKVIGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNR 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLYE ELQK+       E +K++
Sbjct: 181 TESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFELQKKNAEKKALEDTKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L +
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVETRNAQSVLDGDLDKFIEASLKV 287


>gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
 gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
          Length = 356

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 183/347 (52%), Gaps = 18/347 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            ++  ++   L  +  DP ++ +    + L +    L   +      +E++  L DN  L
Sbjct: 5   LESLERKFLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLADNQEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGT 128
           L     + D  I +   + ++ I+ ++   + +     L +   D  +  LE+ AG GG 
Sbjct: 65  L----NDADPDIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L RMY R+AEK  +K E +   + +  G K    LI G   Y  LK E G H
Sbjct: 121 EAALFGGDLFRMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ + P   + +++++   D R D YR+SG GGQ VNTTDS
Sbjct: 181 RVQRVPATESQGRIHTSAATVAIMPEA-EEVDLDLKPEDLRFDVYRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VV CQ E+SQHKNKA+   +L ++L  L++++ E+ A + +  + ++G 
Sbjct: 240 AVRVTHIPTGLVVCCQDEKSQHKNKAKGLKILCSRL--LQMKQDEQNAALADQRRAQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   V D R N+   S   VL+G++ + + A + 
Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYSLGKVLEGEIQELVDALVT 343


>gi|86148712|ref|ZP_01066989.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218708755|ref|YP_002416376.1| peptide chain release factor 1 [Vibrio splendidus LGP32]
 gi|254790907|sp|B7VKH3|RF1_VIBSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85833505|gb|EAQ51686.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218321774|emb|CAV17730.1| Peptide chain release factor 1 [Vibrio splendidus LGP32]
          Length = 362

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 123/346 (35%), Positives = 187/346 (54%), Gaps = 11/346 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  N  + + L +E   L+      K  Q    D    
Sbjct: 6   LIKLETLVERYEEVQHLLGDPDVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQEDLEAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGT 128
            E+A  EDD  + +   + ++  K  +E    + + LL      D  + +LE+ AGAGG 
Sbjct: 66  EEMA-NEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AEK+ ++ E +  +  E+ G K     I G   YG +K E G H
Sbjct: 125 EAGIFAGNLFRMYSKFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI   D +IDT+RASGAGGQHVNTTDS
Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A I ++ +  +G 
Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+     ++VL+GD+   +   L
Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVL 347


>gi|330686486|gb|EGG98080.1| putative peptide chain release factor 2 [Staphylococcus epidermidis
           VCU121]
          Length = 271

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 148/266 (55%), Positives = 191/266 (71%), Gaps = 1/266 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             +N+   K E+++ + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+
Sbjct: 1   LENNVIEFKSEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQ 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+
Sbjct: 61  SGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFA 120

Query: 208 SIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q E
Sbjct: 121 SCDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNE 180

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD 
Sbjct: 181 RSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDH 240

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RTN E      V+DGD+  F++A L 
Sbjct: 241 RTNEETGKVDAVMDGDIGPFIEAYLR 266


>gi|149177843|ref|ZP_01856442.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
 gi|148843333|gb|EDL57697.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
          Length = 331

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 152/326 (46%), Positives = 215/326 (65%), Gaps = 2/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W N  +A+ L+ E Q +   +  + ++ +   D  +L+E   EE     + E S
Sbjct: 1   MGAAGFWDNQEKAQGLVNEMQQIQLVVKPLTQLVEGAEDLEVLIEFIEEEGSEDSIPELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +R++  +E+ + ++++S   D + AYL + AG GGT+S DWA MLLRMY RW E+R 
Sbjct: 61  ATAERLESILEHLELQAMMSAPEDGSAAYLSIQAGEGGTDSSDWAEMLLRMYLRWCERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  D EEAGI+SAT+ I+G  AYG+LKGE G HRL+RISP+DS  RRHTSF+++
Sbjct: 121 FNVELLDRSDAEEAGIRSATIRIEGDYAYGYLKGETGNHRLIRISPFDSAGRRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P + +  EIEIS + D R DTYRASGAGGQH+N TDSA+R+TH+ + VVVQCQ  RS
Sbjct: 181 DVSPDMGEVAEIEISWDQDVREDTYRASGAGGQHINKTDSAIRLTHLESNVVVQCQNNRS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-IRSYVLQPYQMVKDLR 327
           QHKN+A+A  ML++KL+++E +KR+         K++IG+G Q +R+YVL P Q VKD R
Sbjct: 241 QHKNRAEARKMLKSKLFQIEQEKRDAELAAKRGGKSKIGFGGQTVRNYVLHPDQYVKDAR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           T  +  +P  +LDGDLD F++A L  
Sbjct: 301 TGFKAGNPGPILDGDLDGFLEAFLRW 326


>gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
 gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
          Length = 360

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL+ ++     P +  +    + L RE   L   ++  ++      D     E+
Sbjct: 9   LEHLSDRLAEIDELLMQPEVVSDQENYRKLNREHAELAPVVALYRDFSQVRQDIDTAREM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     Q E     ++I    E  Q   L     D  + YLE+ AG GG ES  +A
Sbjct: 69  LADPEMKEFAQQEIDGAEKKIAGIEEELQLMLLPKDPDDGKNIYLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AEK ++K E +     E  G +   + + G + Y  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRLVGKDVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  DD  ++ I+ +D R+DT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 VTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNKAQA  +L A++ + ++  +E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQM--QEQQAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGD+D+ + A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVSALVA 346


>gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
 gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
          Length = 361

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 117/340 (34%), Positives = 180/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +    + L +E   L+  +      Q    D     E+
Sbjct: 9   LETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLAYQQTKEDLASAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   +  +  K ++    +  Q   L     D+N+ +LEV AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAQEEYKEAKAQILSLEDEIQVLMLPKDPKDNNNVFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ 
Sbjct: 128 IFAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANISGEGVYGKLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR    A+   +         
Sbjct: 248 ITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKRHAAEASERRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+     ++V+ GDL   +   
Sbjct: 308 RIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLGAIVDPL 346


>gi|206890892|ref|YP_002247867.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742830|gb|ACI21887.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 287

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 144/275 (52%), Positives = 203/275 (73%)

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EED   +L++  + ++ IK ++E+ + + LL GE D N+A + +H GAGGTESQDWA +L
Sbjct: 7   EEDGYLLLKDLEEEVENIKSQIEHLEIKLLLKGEHDKNNAIVSIHPGAGGTESQDWAEIL 66

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY RWAEK+ FK E +++  GEEAGIK  T  ++G  AYG+LK E GVHRLVR+SP+D
Sbjct: 67  MRMYLRWAEKKGFKVEIVDLQLGEEAGIKDVTFTVEGQYAYGYLKCESGVHRLVRVSPFD 126

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N RRHTSF+++ V P ++D+I++EI + D R+DT+RASGAGGQHVN   SAVRI HIPT
Sbjct: 127 ANKRRHTSFAAVSVLPEIEDNIQVEIKDEDIRVDTFRASGAGGQHVNKVSSAVRIVHIPT 186

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G++V CQ ERSQH+N+  A  +LR+K+Y L  +++E+       +K EI WG QIRSY+L
Sbjct: 187 GIIVTCQTERSQHRNREIAMKILRSKIYALLQKEQEDKIKSITGNKKEIAWGSQIRSYIL 246

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            PY+++KD RT+IE  +  DVLDG++D F++  L 
Sbjct: 247 HPYRLIKDHRTDIEVYNVEDVLDGNIDIFIETYLK 281


>gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9]
 gi|61214628|sp|Q6LNB4|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum
           SS9]
          Length = 362

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 7/344 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     DP +  +  + + L +E   L++     +       D    
Sbjct: 6   LVKLETLVERYEEIQHLLGDPGIIGDQNKFRALSKEYSQLEDITQCFQAYLGAKDDLEAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            E+A + DD  + +   + ++  K  +    +  Q   +     D  + ++E+ AGAGG 
Sbjct: 66  EEMAKD-DDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE+R ++ E +  +  E+ G K     + G  AYG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR  E A+   +      
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRHAEEASTRRNLLGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   V D R  +     ++V++GD+D  ++  +
Sbjct: 305 RSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDMDSLIQPVI 347


>gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
 gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
          Length = 360

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 120/345 (34%), Positives = 186/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            D+  +R   L     D  +  +  + +   +E   L++ +       ++   L +  +L
Sbjct: 9   LDSLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKSFSRWNQLNANLEEAQLL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E    + Q   L     D  + YLE+ AG GG 
Sbjct: 69  L------DDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K    L+ G  AYG LK E G H
Sbjct: 123 EAGIFAGDLFRMYSRYAETKRWRIEVLSENESEQGGFKEIIALVSGDGAYGQLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ SD RIDTYRASGAGGQH+N TDS
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIG 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L  + + +  +E A+   +      
Sbjct: 243 AVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLEQEQADTRRNLLGSGD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +DD ++  + 
Sbjct: 303 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIIT 346


>gi|329124057|ref|ZP_08252604.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
 gi|327467482|gb|EGF12980.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
          Length = 283

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 160/282 (56%), Positives = 211/282 (74%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E    L  ++ ++E  +F  + SGE D+ + Y+++ AG+GGTE+Q
Sbjct: 1   MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACNCYVDLQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLV
Sbjct: 61  DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+     + E +K++IGWG Q
Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQVMEDNKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281


>gi|297623932|ref|YP_003705366.1| hypothetical protein Trad_1705 [Truepera radiovictrix DSM 17093]
 gi|297165112|gb|ADI14823.1| conserved hypothetical protein [Truepera radiovictrix DSM 17093]
          Length = 377

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 145/355 (40%), Positives = 204/355 (57%), Gaps = 9/355 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ QL+ L G  D      RL+ L  +  DP LW +   A+ L +E   L   +     
Sbjct: 14  EMTAQLHALRGYLDLARKEARLAELEPQLSDPKLWDDPEAARTLTQEAARLRRVLETFHR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L     L ELA   ++    Q+       ++  ++    E+L SG  D   A L +
Sbjct: 74  LEGDLEGLRELQELATTPEEQ---QDLEAERAALQRTLDALYRETLFSGPHDDRAAILTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSATLLIKGPNAYG 179
             GAGGTES DWA ML RMY R+AE++ F+ E L+    + A  GI  A L+I+G  AYG
Sbjct: 131 KPGAGGTESSDWAGMLWRMYRRFAERQGFEVELLDATPSDAAPNGIDYAQLIIRGERAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVR+SP+D+  RRHTSF+S+ V P +DD++EI I   D R+D YR+SG G
Sbjct: 191 LLQVESGVHRLVRVSPFDAQGRRHTSFASVEVMPEIDDAVEITIDPKDVRVDVYRSSGPG 250

Query: 240 GQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GQ VNTTDSAVR+ +    P  +VV CQ  +SQ KN+ +A  +LR++L+E E ++R E  
Sbjct: 251 GQSVNTTDSAVRVVYKGGTPEEIVVTCQDGKSQIKNREKAMTVLRSRLFEREERRRLEEQ 310

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                 +  I WG QIRSYVL   + VKD RT   +  P DVLDGD++  + + L
Sbjct: 311 MRARGEQKAIEWGSQIRSYVL-DKRYVKDHRTGEMRHDPDDVLDGDIEGLIWSGL 364


>gi|262401638|ref|ZP_06078204.1| peptide chain release factor 2 [Vibrio sp. RC586]
 gi|262352055|gb|EEZ01185.1| peptide chain release factor 2 [Vibrio sp. RC586]
          Length = 289

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 165/287 (57%), Positives = 213/287 (74%), Gaps = 1/287 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E +D     E    L+ ++ ++E  +F  + SG+ D++D YL++ AG+
Sbjct: 1   MEDVDGLLELAIEAEDQETFDEIGPELEELEAKLEQLEFRRMFSGDHDASDCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNT
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNT 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E SK++
Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDSKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286


>gi|254796954|ref|YP_003081791.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
 gi|254590201|gb|ACT69563.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
          Length = 334

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 167/330 (50%), Positives = 235/330 (71%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +    + P LW++   A++L++E+  ++ ++   +E+  +L D   ++ELA ++ +  
Sbjct: 2   EEIQALVDSPRLWEDQSRAQLLLKEKSQIETSLKEFRELSIQLDDLTEMIELASKDGEEG 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            +++    L  +K +++ K+ E L SGEAD ND  LE+ +GAGGTES DWA MLLRMYTR
Sbjct: 62  AMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTESNDWAMMLLRMYTR 121

Query: 144 WAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WAE   KF+ + ++  +GEE GIKS TL + G NAYGW + E GVHRLVRISP+D+N++R
Sbjct: 122 WAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+ ++V P ++  I I I E D +IDTYRASGAGGQHVN T+SAVRITH+P+ +VVQ
Sbjct: 182 HTSFAKVFVSPCMEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAVRITHLPSKIVVQ 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
            Q  RSQH+NKA+A  ML+++LYE+EL+K+EE  N   + +  IGWG QIRSYVL PYQM
Sbjct: 242 SQSSRSQHQNKAEAIQMLKSRLYEIELRKKEEKVNAARNVEDSIGWGYQIRSYVLHPYQM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KDLRT  E  + + VLDGDLD F+ AT++
Sbjct: 302 IKDLRTGHEVGNITSVLDGDLDSFIIATIS 331


>gi|156744082|ref|YP_001434211.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
 gi|156235410|gb|ABU60193.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
          Length = 317

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 142/310 (45%), Positives = 198/310 (63%), Gaps = 3/310 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   +  I+ +  +L     L++LA  E+D S+  + +  L+R + E+E  + E
Sbjct: 1   MQRLTRLKEEVERIEALDRQLTALADLIDLAAAEEDDSLQADIAAELERTRREIEALEIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D  DA+L + AG GGT++QDWA MLLRMY RW E+R F+   ++  DGEEAGI
Sbjct: 61  VLLSGPYDDRDAFLSIKAGMGGTDAQDWAEMLLRMYMRWGERRGFQVALIDQSDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ ++GP AYG  K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I  
Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRA 282
            D R+D +RASG GGQ VNTTDSAVRIT+    P  +VV CQ ERSQ +N+  A  +LR 
Sbjct: 181 EDIRVDVFRASGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L E ELQ++ E          +  +G Q+R+Y L PY +VKD RT+ E +    VLDGD
Sbjct: 241 RLLERELQRKREERARLRGEYRQADFGNQMRTYYLHPYTLVKDHRTDYETSDVQAVLDGD 300

Query: 343 LDDFMKATLA 352
           +D F++A L 
Sbjct: 301 IDPFIEAYLR 310


>gi|307244007|ref|ZP_07526126.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492531|gb|EFM64565.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
          Length = 354

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 184/344 (53%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  +    + LM+E   ++  +   +E            ++  E
Sbjct: 8   LEDKYKELSQKVADPDIISDQPTWQKLMKETSEIEPIVMKYREYSKASQSIAESKQILEE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +     L   +  +E  +   + LL      D  +  +E+  GAGG E+  +A
Sbjct: 68  ESDEDLRELAKMELSESEALLEEYENELKILLVPKDPNDEKNVIIEIRGGAGGDEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+R +KT  +  ++    G K  + +IKG  AY  LK E GVHR+ RI 
Sbjct: 128 GDLFRMYSRYAERRGWKTSLMSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +EI+I+  D R+D +RASG GGQ VNTTDSAVR+TH
Sbjct: 188 TTESGGRIHTSTATVAVLPEV-EDVEIDINPEDVRVDVFRASGNGGQCVNTTDSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV CQ E+SQ KNK +A  +L+A+LY+  L   E+  +I    K+++G G    +
Sbjct: 247 IPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKAL--AEQQKDIAAERKSQVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+        +DGDLD+ + A + + +
Sbjct: 305 IRTYNF-PQGRVSDHRINLTLYKLDSFIDGDLDEMIDALITVDQ 347


>gi|87309088|ref|ZP_01091225.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
 gi|87288079|gb|EAQ79976.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
          Length = 332

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 213/325 (65%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W N   A+ ++ + + L + +  ++     + D   +LE+A  E+D S   E  
Sbjct: 1   MVAPDFWDNQEIAQTVVGQLKSLKSILEPLEACAAAVGDLDAMLEMA--EEDDSFDAEAK 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + R++ E++  + ++LL+G+ D+  A + +HA  GGT++ DWA MLLRMY+ WA +  
Sbjct: 59  AEVARLEAELDQLELKALLNGQHDACGALVSIHARDGGTDANDWAEMLLRMYSHWAAEHD 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++  D EEAGI SAT  ++G  AYG+LKGE G+HRLVRISP++S  +R TSF+++
Sbjct: 119 YTVELIDRADNEEAGINSATFAVRGVMAYGYLKGESGMHRLVRISPFNSEGKRQTSFAAV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + DS E+EI E D RIDTYRASGAGGQHVN TDSA+R+TH+PTGVVVQCQ ERSQ
Sbjct: 179 DVSPEIPDSEEVEIDEEDVRIDTYRASGAGGQHVNKTDSAIRLTHLPTGVVVQCQNERSQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN+AQAW MLR+++  +E ++RE        ++ ++G+G QIR+Y L P Q VKD RT 
Sbjct: 239 HKNRAQAWKMLRSRIARIEEERREAEEAARYKTQAKVGFGSQIRNYFLHPDQRVKDARTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
               S   V+DGD+  F+ A L  +
Sbjct: 299 HYVGSFHAVMDGDIQGFLDAYLRWR 323


>gi|255525833|ref|ZP_05392762.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
 gi|255510476|gb|EET86787.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
          Length = 358

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  +  E + L +E   L+  +   ++ +    +     E+
Sbjct: 5   LEFIENKYEELSAKISDPSIMADQKEWQKLCKEHAELETLVIKYRQYRKAEEELESNKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +     ++++ ++  ++    +   LL      D  + ++E+  GAGG E+ 
Sbjct: 65  LKDETDKDMRDMIQEDIKELEASMDEARQELRILLLPKDPNDDKNVFVEIRGGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ +K E + ++  +  G K    +IKG  AY  LK E GVHR+ 
Sbjct: 125 LFAANLTRMYTRYAERKGWKVETISLNATDIGGFKEIVFMIKGAGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P V D +++ I+ +D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLPEV-DDVDLVINANDIRIDVFRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+++L+  E  + E  A I E  K+++G G  
Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLF--ERAEAERSAGIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +        LDGD+D+ + A +   +
Sbjct: 302 SERIRTYNY-PQGRVTDHRIGLTLYKLDSYLDGDIDEVIDALITTDQ 347


>gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
 gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
          Length = 361

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 185/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L++ +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 347


>gi|150015294|ref|YP_001307548.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
 gi|189039964|sp|A6LQG2|RF1_CLOB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149901759|gb|ABR32592.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
          Length = 360

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D  +    +   L+ K  DP + QN  E + L +E   L+  ++  +E +  + D   
Sbjct: 2   LLDKLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEVIVNSYREYKKVVEDLKA 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +  ++ +  +    E  + E     L     D  + ++E+  GAGG
Sbjct: 62  NKEMLSGESDKEMREMLNEEITDLTNREEQLETEIQILLLPKDPNDDKNVFVEIRGGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE +++  E + +++ +  G K    +IKG  AY  LK E GV
Sbjct: 122 EEAALFAYNLFRMYTRYAETQRWGVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V D +EIE+++ D RID +RASG GGQ VNTTD
Sbjct: 182 HRVQRVPDTESSGRIHTSTATVAVLPEV-DDVEIEVADKDVRIDVFRASGNGGQCVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV CQ E+SQ KNK +A  +L+++LY  E  +RE    I E  K+++G
Sbjct: 241 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAQGIAEDRKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        L GD+D+ + A +   +
Sbjct: 299 TGDRSERIRTYNY-PQGRITDHRIGLTLYKLDTFLGGDIDEMINALITADQ 348


>gi|157825493|ref|YP_001493213.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
 gi|157799451|gb|ABV74705.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
          Length = 285

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 164/279 (58%), Positives = 209/279 (74%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAASENDLETLSQIEQDLKNLSILAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEE GIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMLNGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPAIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDSSWGYQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           Y+L PYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YILHPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 355

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 178/339 (52%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL   
Sbjct: 8   IEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEELLDT 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + D    +   + L + K + E  + +     L     D  +  +E+ AGAGG E+  +A
Sbjct: 68  DLDEDFEKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+ 
Sbjct: 128 AELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H
Sbjct: 188 VTESGGRIHTSTATVAVLPEV-EDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
            PTG+VV CQ ERSQH N+ +A  +LRA+LY+  +  +++EI +   S         +IR
Sbjct: 247 KPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +       VLDG+LD+ + A + 
Sbjct: 307 TYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|189502408|ref|YP_001958125.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497849|gb|ACE06396.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 332

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 149/330 (45%), Positives = 215/330 (65%), Gaps = 2/330 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L     K+  P  W+N  +A++++R  +   + I     ++  L +  +  +L  E  D 
Sbjct: 2   LQDQEAKSLAPDFWENTSQAEVILRNLKITKSWIDAFDHVESLLENLEVT-QLFYEAGDV 60

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
               E     Q +   +E  +   +L  E D N A +E++ GAGGTESQDWA ML RMY 
Sbjct: 61  D-ETEVEKAYQNLLTGLEALEVRKMLQNEEDENSAIIEINPGAGGTESQDWAEMLTRMYI 119

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            W EK  +  + L    G+ AG+KSATL I G  AYG+LK E G+HRLVRISP+D+  +R
Sbjct: 120 MWGEKHNYTVKELAYQRGDVAGVKSATLEITGTFAYGYLKSEIGIHRLVRISPFDAAGKR 179

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+SI+VYPVV+++I+I+I+ +D   DT+RA GAGGQ+VN  ++AVR+ H P+G++V+
Sbjct: 180 HTSFASIYVYPVVENNIQIDINPADITWDTFRAGGAGGQNVNKVETAVRLKHAPSGIIVE 239

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQQERSQ +NK +A  +L++KLY+LEL KR       ESSK  I +G QIR+YVL PY++
Sbjct: 240 CQQERSQAQNKEKALRILKSKLYQLELDKRNAEKEKMESSKKRIDFGSQIRNYVLHPYKL 299

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           VKD RT++E +  S VL+G++D+F+KA L 
Sbjct: 300 VKDNRTDVETSDTSGVLNGNIDEFIKAYLM 329


>gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
 gi|259585256|sp|C5BSZ6|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
          Length = 360

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+R   +     DP +  +  + + L +E   L+  +   +E +  + +      +
Sbjct: 9   LENLVERYDEVGALLGDPDIIADQKKFRDLGKEYSELEPVVICYQEYRTVIENIAEAK-M 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            + + D  + +   + L+  + ++E  + +     L     D  + +LE+ AG GG E+ 
Sbjct: 68  LMNDGDADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+  ++ E +  + GE  G K     + G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  D+S E+E+++ D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKN+A+A ++L A++   +  Q   E A+  +S         
Sbjct: 248 ITHIPTGIVVECQDERSQHKNRAKAMSLLAARINSAQAEQFAAEQASERKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      ++++G LD+ ++  +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEIMEGSLDEVIQPLV 347


>gi|124004130|ref|ZP_01688976.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
 gi|123990200|gb|EAY29699.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
          Length = 356

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 121/340 (35%), Positives = 183/340 (53%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +      P   Q++     L +E + L+  +    E +  L +     E+
Sbjct: 5   LEAIKERFDEVGQLIVKPETIQDMDLYTKLTKEYKDLEKVVEKYNEYKIVLENIDTSKEI 64

Query: 76  ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     L+ +  + E   ++ ++LL      DS +  LE+  GAGG E+ 
Sbjct: 65  LSTEKDPEMKEMAKMELEELNPQKEKIEEELKTLLIPKDPNDSKNVILEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AEKRK+K E ++  DG   G K     I G + YG +K E GVHR+ 
Sbjct: 125 IFAGDLLRMYQRFAEKRKWKFELMDFTDGSSGGFKEVVCSISGEDVYGMMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P + + +E+ I  SD R D + +SG GGQ VNTT SAVR
Sbjct: 185 RVPATETQGRVHTSAASVAVLPEM-EDVEVNIDPSDVRSDYFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTG+VV CQ E+SQ KNKA+A  +LR+KLYE+EL K++E       S    G    
Sbjct: 244 LTHIPTGIVVSCQDEKSQIKNKAKAMKVLRSKLYEIELSKQQEELGAQRKSMVGSGDRSD 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R      +  +V+DG++ DF+++ 
Sbjct: 304 KIRTYNY-PQGRVTDHRIKYTVHNLPNVMDGEIADFIESL 342


>gi|157827015|ref|YP_001496079.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
 gi|157802319|gb|ABV79042.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
          Length = 285

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 171/279 (61%), Positives = 215/279 (77%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D  I+Q+   +LQ +       + E L SGEADSN+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGWLK E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWLKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A+LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 279


>gi|312877228|ref|ZP_07737197.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796037|gb|EFR12397.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 355

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 177/339 (52%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL   
Sbjct: 8   IEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEELLDT 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + D    +   + L   K + E  + +     L     D  +  +E+ AGAGG E+  +A
Sbjct: 68  DLDEDFEKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+ 
Sbjct: 128 AELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H
Sbjct: 188 VTESGGRIHTSTATVAVLPEV-EDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
            PTG+VV CQ ERSQH N+ +A  +LRA+LY+  +  +++EI +   S         +IR
Sbjct: 247 KPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +       VLDG+LD+ + A + 
Sbjct: 307 TYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|27904871|ref|NP_777997.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|27904269|gb|AAO27102.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 337

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 150/334 (44%), Positives = 219/334 (65%), Gaps = 1/334 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  +N + + P  W++    K + +E+  L + ++ I +I + + + + +L L   
Sbjct: 2   KKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKIDNDVQELIDILNLENS 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            +  SIL       + I+  +   +  S+  G+ D    Y+++ +G+GG E+QDWA+MLL
Sbjct: 62  NNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQSGSGGVEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWAE +KFK + +E   GE  GIKSAT+ + G  A+GW + E G+HRLVR SP+++
Sbjct: 122 RMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFRTETGIHRLVRKSPFNA 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSFSS++VYP++DD+I ++I+  D +ID YRASGAGGQHVN T+SAVRI H+PTG
Sbjct: 182 HHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQHVNKTESAVRIRHLPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ +RSQHKNK QA   L+AKLYE  + +++    I E++K  IGWG QIRSY L 
Sbjct: 242 IVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENNKLNIGWGHQIRSYTL- 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +KDLRT +E  +   VLDG LD F++ +L 
Sbjct: 301 DNSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 334


>gi|153814569|ref|ZP_01967237.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|317501267|ref|ZP_07959471.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|145848063|gb|EDK24981.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|316897334|gb|EFV19401.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 316

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 149/308 (48%), Positives = 216/308 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L +++  I+++     D ++L+E++ EED     +E  + LQ+ +   E  +  
Sbjct: 1   MKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEEELQQFEETFEELRIG 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+G  D ++A + +HAGAGGTES DW  ML RMYTRWAEK+ +  E L+  +G+ AG+
Sbjct: 61  TLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGYSIEELDYLEGDVAGV 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  +KG NAYG+L+ E+GVHRLVRISP++S  +R TSF+S  V P +++ I+IEI++
Sbjct: 121 KGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEEDIDIEIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQH NK +A  ML++KLY
Sbjct: 181 DDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       +I +G QIRSYV+QPY MVKD RTN E ++   V+DG++D 
Sbjct: 241 LMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTNAEVSNVGGVMDGNIDP 300

Query: 346 FMKATLAI 353
           F+ A L+ 
Sbjct: 301 FINAYLSA 308


>gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
 gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
          Length = 357

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 185/342 (54%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L     DP ++ +    + L +E  HL   +   +E +           +
Sbjct: 7   IEELITRFKELEEALADPSIFNDQKRYRELAQEHAHLSQVVRTAEEYRRLEARLEEAKTV 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  + +   + ++ ++ ++ + +   + LL      D  +  LE+ AG GG E+ 
Sbjct: 67  LEEEDDHELKEMAREEIKALEDQILHTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E +E  + E  G +     I G   YG L+ E G HR+ 
Sbjct: 127 LFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P  +++ E+EI   D R+D +R+SG GGQ VNTTDSAVR
Sbjct: 187 RIPVTESGGRIHTSAVTVAVLPEPEET-EVEIRPEDIRVDVFRSSGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNKA+A  +LRA+LYE+E  K+ + +      +++IG G  
Sbjct: 246 ITHLPTGLVVTCQDEKSQHKNKAKALKILRARLYEME--KQRQESERAAMRRSQIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+       V+DGDLD+ + A 
Sbjct: 304 SERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDAL 344


>gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254790859|sp|B9MR68|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 355

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 178/339 (52%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL   
Sbjct: 8   IEEKYLELEKKISDPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILDTIKEAEELLDT 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + D    +   + L R K + E  + +     L     D  +  +E+ AGAGG E+  +A
Sbjct: 68  DLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+ 
Sbjct: 128 AELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H
Sbjct: 188 VTESGGRIHTSTATVAVLPEV-EDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
            PTG+VV CQ ERSQH N+ +A  +LRA+LY+  +  +++EI +   S         +IR
Sbjct: 247 KPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +       +LDG+LD+ + A + 
Sbjct: 307 TYNF-PQGRVTDHRIGLTLYKLEQILDGELDEIIDALIT 344


>gi|34580696|ref|ZP_00142176.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
 gi|28262081|gb|EAA25585.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
          Length = 285

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 166/279 (59%), Positives = 210/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|225175296|ref|ZP_03729291.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
 gi|225169048|gb|EEG77847.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
          Length = 288

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 158/279 (56%), Positives = 203/279 (72%), Gaps = 1/279 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           LA +E D  +  +       +  E++  +   L  G  D+N+A + +H GAGGTESQDWA
Sbjct: 3   LAEDEGDKELWVDAEQVAAELAAEMDKLELAVLFRGRYDANNAIIAIHPGAGGTESQDWA 62

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           NMLLRMYTRWAE+R ++ E L++  G+EAGIKSATLLIKG NAYG+LK E+GVHRLVRIS
Sbjct: 63  NMLLRMYTRWAERRNYQVEVLDLLPGDEAGIKSATLLIKGRNAYGFLKAERGVHRLVRIS 122

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           P+D+ SRRHTSF+S+ V P V++    IEIS  D +IDTYRASGAGGQHVNTTDSAVRIT
Sbjct: 123 PFDAASRRHTSFASLDVLPEVEEGDSGIEISPDDLKIDTYRASGAGGQHVNTTDSAVRIT 182

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG VVQCQ ERSQH N+ +A  +L+A+L +L  +++ E  +     + EI WG QIR
Sbjct: 183 HIPTGTVVQCQNERSQHSNRDRAMKILKARLADLYQRQQAEELSNLRGEQKEIAWGSQIR 242

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SYV QPY MVKD RT +E  + + V+DGDLD+ +++ L 
Sbjct: 243 SYVFQPYTMVKDHRTGVEVGNINAVMDGDLDELIESYLR 281


>gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
 gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
          Length = 320

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 152/315 (48%), Positives = 213/315 (67%), Gaps = 5/315 (1%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDCSILQETSDNLQRIKL 97
            AK+L++E+Q ++  +S   E+   + D   L  +  E   E+D  +L   +D  ++++ 
Sbjct: 2   AAKILLKEKQEVEVVVSQYDELLLLIDDAKTLQAMVSEGLVEEDMEML--ATDIFKKLEA 59

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +  +LL+G+ D  +AY+ +H+G+GG+++QDW  MLLRMYTRWAE + F+ + +++
Sbjct: 60  GYHKLKVTTLLAGKHDKANAYISIHSGSGGSDAQDWGKMLLRMYTRWAENKGFQIDVIDL 119

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
           +    AG KSATLLIKG NAYG+LK E+GVHRLVRISP+DS+SRRHTSF+S+ V P +  
Sbjct: 120 NQNGVAGFKSATLLIKGLNAYGYLKKERGVHRLVRISPFDSSSRRHTSFASVDVIPEIKT 179

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              I+I + D RID +RASGAGGQHVN TDSAVRI H+PT +VV CQ ERSQH NK  A 
Sbjct: 180 DKVIKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPTKIVVTCQNERSQHMNKEAAM 239

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +ML +KL EL+ ++ +E  N       +I WG QIRSYV  PY+MVKD RT  E  +   
Sbjct: 240 HMLISKLMELKEKEHKESINDLTGDYNQITWGSQIRSYVFHPYRMVKDHRTGAEMGNVDA 299

Query: 338 VLDGDLDDFMKATLA 352
           V+DGDLD F++  L+
Sbjct: 300 VMDGDLDYFIQMELS 314


>gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 355

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 120/339 (35%), Positives = 176/339 (51%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL   
Sbjct: 8   IEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKKILNTIKEAEELLDT 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + D    +   + L R K + E  + +     L     D  +  +E+ AGAGG E+  +A
Sbjct: 68  DLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+ 
Sbjct: 128 AELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H
Sbjct: 188 VTESGGRIHTSTATVAVLPEV-EDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++       S+   G    +IR
Sbjct: 247 KPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +       VLDGDLD+ + A + 
Sbjct: 307 TYNF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALIT 344


>gi|68249758|ref|YP_248870.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|68057957|gb|AAX88210.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|301169953|emb|CBW29557.1| peptide chain release factor 2 [Haemophilus influenzae 10810]
          Length = 283

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 161/282 (57%), Positives = 210/282 (74%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+GGTE+Q
Sbjct: 1   MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLV
Sbjct: 61  DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++IGWG Q
Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281


>gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR]
 gi|61214579|sp|Q5QUZ8|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR]
          Length = 364

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 183/342 (53%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     +P +  +    + L RE   L+  +   +E +    D     ++
Sbjct: 10  LEGLVERYQEVQALLGEPDVISDQNRFRSLSREYSQLEEVVGCFEEYRQNQDDQAAAKDM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
           A E+DD  + +   + L+  +   E  +             D    YLE+ AGAGG E+ 
Sbjct: 70  A-EDDDAEMREMAEEELKEARKAEEELENRLQLLLLPKDPNDDRSCYLEIRAGAGGDEAS 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK  +K   +   DGE  G K     + G   YG +K E G HR+ 
Sbjct: 129 IFAGDLFRMYSRYAEKNGWKVNIVSASDGEHGGYKEIIAHMSGDGVYGRMKFESGGHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++  +EI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 189 RVPETESQGRIHTSACTVAVLPEIPEAEAVEINPADLRVDTYRASGAGGQHVNRTDSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTGVVV+CQ+ERSQHKN+A+A ++L+A++  LE +KR+   +    +    G    
Sbjct: 249 LTHIPTGVVVECQEERSQHKNRAKAMSVLQARIQRLEDEKRQAEEDSTRRNLVGSGDRSE 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +VL GD+D  + A + 
Sbjct: 309 RIRTYNY-PQSRVTDHRINLTLYRLDEVLTGDIDLILDAIIT 349


>gi|28210063|ref|NP_781007.1| peptide chain release factor 1 [Clostridium tetani E88]
 gi|32171526|sp|Q898Y5|RF1_CLOTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28202498|gb|AAO34944.1| bacterial peptide chain release factor 1 [Clostridium tetani E88]
          Length = 355

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 204/351 (58%), Gaps = 12/351 (3%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  N    +   L+ K  DP + Q+  E + L +E   ++  ++  KE ++ L     
Sbjct: 1   MLDRLNFIENKYEELSIKISDPTVMQDQKEWQKLCKEHSDMETIVTTYKEYKEVLQSIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
             E+  E+ +  +     ++++ ++  V+  +   + LL      D  + ++E+ AGAGG
Sbjct: 61  NKEMLKEDIEQELRDMVQEDIKELEQRVQELEQELKMLLVPKDPNDEKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTEA+ +++ +  G K    +++G  AY  LK E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHNWKTEAVSVNETDIGGFKEIVFMVRGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V + +++EI+++D R+D YRASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLPEV-EDVDVEINQNDLRVDVYRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQ KNK +A  +L+++LY+  + + E  A+I E  K+++G
Sbjct: 240 SAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYD--MLESERSASIAEDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        LDGD+++ +   + +++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESFLDGDIEEMIDGLITVEQ 347


>gi|260881387|ref|ZP_05404264.2| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
 gi|260849258|gb|EEX69265.1| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
          Length = 360

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 111/347 (31%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L +   DP    ++ + +   +E   L   I+  +  ++ L        +
Sbjct: 8   LQAVEDKYRELESLISDPETMADMAKWQAYTKEHAALTPIITKFRRYKEVLKGIEEAKSM 67

Query: 76  ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E  D  +       L  +  + E   K+   LL      D  +  +E+  G GG E+ 
Sbjct: 68  LGEALDHEMHAFVESELADLMEQKEALDKELPILLLPKDPNDEKNVIVEIRGGVGGEEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ +K E ++ +  E  G K  T ++ G  AY +LK E G HR+ 
Sbjct: 128 LFAGDLFRMYSRYAEKKGWKVELMDANATEIGGFKEVTFMVTGYGAYSYLKYESGTHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +++ I+ +D RIDTY ASGAGGQ+VN T++A+R
Sbjct: 188 RVPVTESGGRIHTSAATVAVLPEA-EDVDVAINPADLRIDTYCASGAGGQYVNRTETAIR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ E+SQ KNK +A  +LRA++  L+  ++E+ A +    ++++G G  
Sbjct: 247 ITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARI--LDKARQEQEAAVAADRRSQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +LDGDLD+ + A +   +
Sbjct: 305 SERIRTYNF-PQGRVTDHRIGLTLHKIDAILDGDLDELLAALITADQ 350


>gi|238650499|ref|YP_002916351.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
 gi|238624597|gb|ACR47303.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
          Length = 285

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 167/279 (59%), Positives = 212/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAIIIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGMVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|28198320|ref|NP_778634.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71897686|ref|ZP_00679931.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182680959|ref|YP_001829119.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|28056390|gb|AAO28283.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71732589|gb|EAO34642.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182631069|gb|ACB91845.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|307579427|gb|ADN63396.1| peptide chain release factor 2 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 302

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 159/292 (54%), Positives = 217/292 (74%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + + + +    L+LA  E D  +LQ   +++   +L+VE  +F+ + SG+ D  +A++++
Sbjct: 1   MLNGVAEASEFLDLAEIEQDQEMLQAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+QDWA MLLRMY RWAE R +K E LE+  GE AGIKSAT  ++G  AYGWL
Sbjct: 61  QAGAGGTEAQDWAEMLLRMYLRWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR SP+DS++RRHTSF+S++V P VDD+I+IEI+ +D + D YR+SGAGGQ
Sbjct: 121 KTETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+P+G+VV CQ ERSQH N+ +A  ML AKLYE E+QKR    ++ E+
Sbjct: 181 HVNKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEA 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SK++IGWG QIR+YVL     +KDLRT +E++    VLDGDLD+F++A+L  
Sbjct: 241 SKSDIGWGSQIRNYVL-DQSRIKDLRTGVERSDTQKVLDGDLDEFIEASLKA 291


>gi|91226783|ref|ZP_01261436.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269964522|ref|ZP_06178762.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
 gi|91188914|gb|EAS75198.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269830759|gb|EEZ84978.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
          Length = 289

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 166/287 (57%), Positives = 212/287 (73%), Gaps = 1/287 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+EE+D     E    L  ++ ++E  +F  + SG+ DS+D Y+++ AG+
Sbjct: 1   MEDVEGLLELAVEEEDQETFDEIEPELAELEEKLEKLEFRRMFSGDHDSSDCYIDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLKSATVRISGEYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSF+S ++YP +D++I+I+I+ SD RID YRASGAGGQHVNT
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPSDLRIDVYRASGAGGQHVNT 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++
Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286


>gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
 gi|189039992|sp|A8H7A5|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
          Length = 361

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +S  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDAGVIADQERFRALSKEYSQLEDVVSTFKSFQQAEEDLESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  + +   +  +  K  +    +  Q   L     D N+ ++E+ AGAGG E+ 
Sbjct: 69  M-EEDDPELKEMAQEEYKVAKSAIAALEDELQILLLPKDPNDDNNCFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++  IEI+++D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         +    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRNLVSSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V + R N+      + ++GD+D  ++  +
Sbjct: 308 RIRTYNF-PQGRVSEHRINLTLYRLGEFMEGDIDCVVEPLI 347


>gi|157828246|ref|YP_001494488.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932947|ref|YP_001649736.1| peptide chain release factor 2 [Rickettsia rickettsii str. Iowa]
 gi|157800727|gb|ABV75980.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908034|gb|ABY72330.1| bacterial peptide chain release factor 2 (RF-2) [Rickettsia
           rickettsii str. Iowa]
          Length = 285

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 166/279 (59%), Positives = 211/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S W+YP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWIYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|255327042|ref|ZP_05368118.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
 gi|255296259|gb|EET75600.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
          Length = 375

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 139/356 (39%), Positives = 220/356 (61%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +   + +  L+ +   P LW +V  A+ +     +  + ++ ++ 
Sbjct: 12  ELRAIFTSIAAVSDIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRS 71

Query: 62  IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  R+ D  +++ELA  ED+ +   +L +       I+ ++E  +   LLSGE D  +A 
Sbjct: 72  LSSRIDDVEVMVELAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAV 131

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  +  P A+
Sbjct: 132 VTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAF 191

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG 
Sbjct: 192 GRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGP 251

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L  +++E+    
Sbjct: 252 GGQSVNTTDSAVRMTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLL-RKEQEDAKKK 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +   +  WG Q+RSYVL PYQMVKDLRT  E+ + S+VLDG L+ F+ A +  +
Sbjct: 311 ELAGDIKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWR 366


>gi|88797976|ref|ZP_01113563.1| peptide chain release factor 2 [Reinekea sp. MED297]
 gi|88779173|gb|EAR10361.1| peptide chain release factor 2 [Reinekea sp. MED297]
          Length = 280

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 159/278 (57%), Positives = 210/278 (75%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+EEDD   + + S+ L  ++ ++E  +F  + SGE D ++AYL++ AG+GGTE+QDWA
Sbjct: 1   MAVEEDDEGSVADVSEELAGLQRQLEELEFRRMFSGEMDPSNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E++ FKTE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGEEKGFKTELMEASAGDVAGIKSATVRFEGEYAFGWLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFSS++V P +DD++EIEI+ +D RID YRASGAGGQHVN T+SAVRITH
Sbjct: 121 PFDSGNRRHTSFSSVFVSPEIDDNVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+V QCQ +RSQHKNK QA   L+AKLYE E+ +R+E A + E +K++IGWG QIRS
Sbjct: 181 EPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEREMLQRQEAAQLVEDNKSDIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRT +E  +   VLDG LD F++A+L 
Sbjct: 241 YVLDD-ARIKDLRTGVENRNTQAVLDGALDPFIEASLK 277


>gi|332306089|ref|YP_004433940.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173418|gb|AEE22672.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 362

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 119/338 (35%), Positives = 186/338 (55%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +      P +  +  + + L +E   L+  +    + Q    D     E+
Sbjct: 9   LESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQSAQQDFESAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   +  +  KL +E      Q   L     D ++ ++E+ AGAGG E+ 
Sbjct: 69  MQES-DPEMREMAQEEYKSSKLAIEQYEDELQILLLPKDPNDESNCFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E + +++G+  G K     I G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGILKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V +S  IE++++D +IDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVVVMPEVAESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+P+G+VV+CQ ERSQHKN+A+A  +L+++L +LE +KR+        +    G    
Sbjct: 248 ITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNQLEEEKRQAEETSTRRNLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   V D R N+      DV+ GDLD  ++
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344


>gi|302390589|ref|YP_003826410.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
 gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
          Length = 364

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 195/352 (55%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D   +R   L  +  +P +     E + L +E   L+  +S  +E +  + +   
Sbjct: 1   MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60

Query: 72  LLELALE----EDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAG 126
             EL  E     +    ++E  +NLQ+ + E+ E  +   L     D  D  +E+ AGAG
Sbjct: 61  SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE++ +K E +     E  G K     + G  AY  LK E G
Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   ++  R HTS +++ V P   + +++EI+ ++ RID +R+SG GGQ VNTT
Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLPEA-EEVDVEINPNELRIDVFRSSGHGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQ KN+ +A  +LRAKL  LE+++RE+   I +S ++++
Sbjct: 240 DSAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKL--LEMKQREQNEKIAQSRRSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R         ++LDG+LD+ ++  +A  +
Sbjct: 298 GTGDRSERIRTYNF-PQGRVTDHRIGFTTHQLENILDGELDELIERLIAEDQ 348


>gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99]
 gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99]
          Length = 361

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 187/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPGIIADQTRFRALSKEYSQLEDVVAAFKGFQQATEDLDAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E+D  I Q   + ++  K  +    +  Q   L     D N+A++E+ AGAGG E+ 
Sbjct: 69  -LSENDPEIKQMAQEEMKEAKSLIKKLEDELQILLLPKDPNDDNNAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+ E  +++TE +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVYGRLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLVEVPEAEAIKINPADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR  +      +    G    
Sbjct: 248 LTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSVEETTRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +IR+Y   P   V D R N+     +++++G+LD  +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLNEIMEGELDVLI 343


>gi|258648792|ref|ZP_05736261.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
 gi|260851127|gb|EEX70996.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 132/357 (36%), Positives = 207/357 (57%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D D     L     +T+ P  W +   A+  M++ + ++  +    ++ 
Sbjct: 11  QTRAEALHKYLDIDAKRVELEEEQLRTQAPDFWDDPKRAEEQMKKVKGIEKWVIDYNDVC 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + +     E   +E      +E   + Q+    +E  +  ++L GE DS DA L++++
Sbjct: 71  LLVGELETAFEFYKDE--LVTEEEVDADYQKAIDAIEALELRNMLRGEEDSMDAVLKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY R+AE + +KT    + DG+EAGIK+ T+ I+G  AYG+LK 
Sbjct: 129 GAGGTESQDWASMLMRMYLRYAEAQGYKTRISNLQDGDEAGIKTVTIEIEGDYAYGYLKS 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDNIEVYVDPSKISWDLFRSGGAGGQNV 248

Query: 244 NTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  ++ VR+ +  T         ++++  + R Q +N+  A  +LR++LY+  LQKR   
Sbjct: 249 NKVETGVRLRYQYTDPDTGETEEILIENTESRKQLENRENAMRLLRSQLYDRALQKRRAA 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG LD F+KA L 
Sbjct: 309 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKLDGFIKAYLM 364


>gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
 gi|259585220|sp|C4XIQ1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
          Length = 357

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 111/341 (32%), Positives = 174/341 (51%), Gaps = 8/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  ++   L  +   P +  +    + L +    L + ++  +E +    D     E+
Sbjct: 5   LESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLEDNQEM 64

Query: 76  ALEEDDCSILQETSDN---LQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  I +        L+  ++E+E   +   L     D  +  LE+ AG GG E+ 
Sbjct: 65  AQD-PDPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGDEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE +++K E +   +    G K     I G   Y  LK E G HR+ 
Sbjct: 124 LFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + +++ I  ++ RID YR+SG GGQ VNTTDSAVR
Sbjct: 184 RVPATESQGRIHTSAVTVAIMPEA-EEVDVAIDPNELRIDVYRSSGPGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIP+G+VV CQ E+SQHKNKA+A  +LR++L ++E  K+         S+   G    
Sbjct: 243 VTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAARRSQVGTGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+       VL+GDLD+   A +
Sbjct: 303 RIRTYNF-PQGRVTDHRINLTLYRLDAVLEGDLDELCGALI 342


>gi|119361511|sp|Q2KZZ3|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 177/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    DP    ++   + L RER  L+  +      Q    D     E+
Sbjct: 9   LEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     + ++  +  +E      Q   L     D    +LE+ AG GG ES 
Sbjct: 69  LA---DPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  LLRMY+R+AE + ++ E +     E  G K     I G  AYG LK E G HR+ 
Sbjct: 126 LFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+ + A   +S         
Sbjct: 246 ITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +L+GDL++   A LA
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLA 346


>gi|119361546|sp|Q4QKS1|RF1_HAEI8 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 9   LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 69  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 123 EAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 243 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 303 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 346


>gi|163754877|ref|ZP_02161998.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
 gi|161324944|gb|EDP96272.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
          Length = 316

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 144/307 (46%), Positives = 215/307 (70%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ +     +    E+ D + D  +L E   E D     +E +   ++ K ++E  +F 
Sbjct: 1   MKKLRGEKKWVGDYNEVADLIGDLEVLYEFYKEGDASE--EEVTAQFEKTKTKIEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E DS  A L+V AGAGGTES DWA+ML+RMY  +AEK+ +K + L   +G+ AGI
Sbjct: 59  NMLSDEGDSMSAVLQVTAGAGGTESCDWASMLMRMYLMFAEKQGYKVKELNYQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ 
Sbjct: 119 KTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++TH P+G+ + C + RSQH N+ +A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRTRAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K+ E  +  E+ K +I WG QIR+YV+ PY++VKD+RT  E  +   V++G +D+
Sbjct: 239 EIELKKQMEARDDIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGYIDE 298

Query: 346 FMKATLA 352
           F+KA L 
Sbjct: 299 FLKAYLM 305


>gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
 gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
          Length = 361

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 347


>gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
 gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
          Length = 360

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +  IA+  +          
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N]
 gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N]
          Length = 356

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 177/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    DP    ++   + L RER  L+  +      Q    D     E+
Sbjct: 5   LEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     + ++  +  +E      Q   L     D    +LE+ AG GG ES 
Sbjct: 65  LA---DPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDESA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  LLRMY+R+AE + ++ E +     E  G K     I G  AYG LK E G HR+ 
Sbjct: 122 LFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 182 RVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+ + A   +S         
Sbjct: 242 ITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGSGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +L+GDL++   A LA
Sbjct: 302 RIRTYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLA 342


>gi|291550769|emb|CBL27031.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           torques L2-14]
          Length = 320

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 146/310 (47%), Positives = 215/310 (69%), Gaps = 1/310 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQF 104
           M+E + L +++  I ++     D L+L+E++  ED+     E  +  L   +   E  + 
Sbjct: 1   MKELKGLQDSVKEIDKLFTDYEDMLLLIEMSEGEDEEQEAAEEIEEELGTFEEVFEKLRI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            +LL G  D+++A + +HAGAGGTE+ DW  ML RMY+RWAEK+ ++ E L+  +G+ AG
Sbjct: 61  STLLIGPYDADNAIVTLHAGAGGTEAMDWTGMLYRMYSRWAEKKGYEVEMLDYLEGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK  T  +KG NAYG+L+ E+GVHRLVRISP+++N +R TSF+S  V P +++ I+IEI+
Sbjct: 121 IKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNANGKRQTSFASCDVIPDIEEDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML++KL
Sbjct: 181 DDDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           Y L+ Q++ E  +       +I +G QIRSYV+QPY +VKD RTN E ++   V+DG++D
Sbjct: 241 YVLKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTLVKDHRTNAEISNVGAVMDGNID 300

Query: 345 DFMKATLAIK 354
            F+ A L++ 
Sbjct: 301 PFINAYLSMD 310


>gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822]
 gi|46576758|sp|Q7WCE3|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis]
          Length = 360

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 177/344 (51%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D ++  +  +E  +       L     D    +LE+ AG GG ES 
Sbjct: 69  LS---DPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  LLRMYTR+AE R ++ E +   + E  G K   + I G  AYG LK E G HR+ 
Sbjct: 126 LFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D   +I I+ SD RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + E+  RE  +      K+ IG G  
Sbjct: 246 ITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEM--RERQSKEAAERKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++GDLD+   A LA
Sbjct: 304 SERIRTYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLA 346


>gi|61252075|sp|P43917|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 9   LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 69  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 123 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 243 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 303 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 346


>gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
 gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
          Length = 361

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 347


>gi|109898878|ref|YP_662133.1| peptide chain release factor 1 [Pseudoalteromonas atlantica T6c]
 gi|119361579|sp|Q15SQ9|RF1_PSEA6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109701159|gb|ABG41079.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudoalteromonas
           atlantica T6c]
          Length = 362

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 118/338 (34%), Positives = 185/338 (54%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +      P +  +  + + L +E   L+  +    + Q    D     E+
Sbjct: 9   LESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQGAQGDFESAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   +  +  K  +E      Q   L     D ++ ++E+ AGAGG E+ 
Sbjct: 69  MQES-DPEMREMAQEEYKSSKQAIEQYEDELQILLLPKDPNDESNCFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E + +++G+  G K     I G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V +S  IE++++D +IDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+P+G+VV+CQ ERSQHKN+A+A  +L+++L +LE +KR+        +    G    
Sbjct: 248 ITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEEKRQAEETSTRRNLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   V D R N+      DV+ GDLD  ++
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344


>gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39]
          Length = 316

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 140/306 (45%), Positives = 204/306 (66%), Gaps = 1/306 (0%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             L + +   ++ +  L D   + EL   EDD S+ QE   N+  +  +++  + + LLS
Sbjct: 2   SDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLS 61

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           G  D + A L ++AGAGGT++QDWA MLLRMYTRW E + +K    E+ +G+EAGIKSAT
Sbjct: 62  GPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSAT 121

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDC 228
           L ++GP AYG+LK E+G HRLVRISP+++N +R TSF+ + + P++D+ +I ++I E D 
Sbjct: 122 LEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDL 181

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            I T RA G GGQ+VN  ++AVRI HIPTG+ V+C QERSQ +N+ +A  +L+AKL  + 
Sbjct: 182 EITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVA 241

Query: 289 LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            ++R +          E  WG QIR+YV  PYQMVKDLRT  E T+ +DV++G+LD F++
Sbjct: 242 QEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQ 301

Query: 349 ATLAIK 354
           A L  +
Sbjct: 302 AYLRQE 307


>gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20]
 gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031]
 gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd
           KW20]
 gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21]
 gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
 gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031]
          Length = 361

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 347


>gi|34539945|ref|NP_904424.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
 gi|46576709|sp|Q7MXT5|RF1_PORGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34396256|gb|AAQ65323.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
          Length = 361

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 178/348 (51%), Gaps = 8/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D  D    R   ++T   DP +  ++     L +E + L+   +  ++ ++ L +   
Sbjct: 6   LLDRLDGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEE 65

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
                 +E D  + +   + L      +    E  +   + +   D  +A +E+  G GG
Sbjct: 66  AKHTMAKESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGG 125

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY ++ E + ++ E  ++ +G   G K     +KG   YG LK E GV
Sbjct: 126 DEAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGV 185

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  +
Sbjct: 186 HRVQRVPATETQGRIHTSAATVAVLPEA-EEVDVEINPADIEMQTSRSGGAGGQNVNKVE 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           + V++TH PTG+VV CQQ RSQ  N+  A  MLR+KLY++EL K  E IA   ++  +  
Sbjct: 245 TKVQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEAIAARRKTMVSTG 304

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D R N+   + S V+DG++  F+ A +  +
Sbjct: 305 DRSAKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAE 351


>gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8]
 gi|166223568|sp|A1U367|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter
           aquaeolei VT8]
          Length = 363

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 120/337 (35%), Positives = 187/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +N    D  +  N  + + L RE   ++  +   +  +  L D     EL
Sbjct: 9   LEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLEDIDAATEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  + +   + L   +   E      Q   L     D+ + +LE+ AG GG E+ 
Sbjct: 69  AKD-GDADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEKR+++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D++  +EI+++D R+DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L   EL+K+++ +A   +S         
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQKSMAETRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +IR+Y   P   V D R N+      +V+ GDLD  +
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLDAVV 343


>gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
 gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
          Length = 356

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 122/343 (35%), Positives = 193/343 (56%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   ++  +   +E +  + D     EL
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINSTKEL 64

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  D+  + +   + L    ++ +  +E  +   +     D  +  +E+ AGAGG E+ 
Sbjct: 65  -LSSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY  LK E GVHR+ 
Sbjct: 124 LFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P V + +++EI+ +D RID +R+ G GGQ VNTTDSAVR
Sbjct: 184 RVPTTEAGGRIHTSTATVAVLPEV-EEVDVEINPNDIRIDVFRSGGHGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I E+ K+++G G +
Sbjct: 243 VTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMAL--QEQQKEIAEARKSQVGTGER 300

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 301 SERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 360

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 180/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLLKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKEQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|300781808|ref|YP_003778203.1| hypothetical protein PSPTO_1500 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|290758052|gb|ADD53002.1| protein of unknown function [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 293

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 164/291 (56%), Positives = 216/291 (74%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++
Sbjct: 1   MSSGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL
Sbjct: 61  QAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 121 RTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E 
Sbjct: 181 HVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L 
Sbjct: 241 TKSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASLK 290


>gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|46576754|sp|Q7W023|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576762|sp|Q7WQE9|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS]
          Length = 360

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 176/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D ++  +  +E  +       L     D    +LE+ AG GG ES 
Sbjct: 69  LS---DPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  LLRMYTR+AE R ++ E +   + E  G K     I G  AYG LK E G HR+ 
Sbjct: 126 LFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D   +I I+ SD RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + E+++R+ + A   +S         
Sbjct: 246 ITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDLD+   A LA
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLA 346


>gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1]
          Length = 360

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +  IA+  +          
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493]
 gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111]
 gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154]
 gi|30581025|sp|P47849|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039967|sp|A9KGY3|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039968|sp|A9N9K2|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058710|sp|B6J625|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           RSA 493]
 gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           Dugway 5J108-111]
 gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii
           CbuK_Q154]
          Length = 361

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R S +     D  +  +    + L +E   L+  +   ++ Q      +   E 
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK-AIESAEE 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L+++ L+ E  +   + LL      D  + +LE+ AG GG E+ 
Sbjct: 68  MQQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+++       S    G    
Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++GDLD  +   + 
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348


>gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 360

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLIKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMRDMAVEEVRETKQQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|226354826|ref|YP_002784566.1| peptide chain release factor 2 [Deinococcus deserti VCD115]
 gi|226316816|gb|ACO44812.1| putative Peptide chain release factor 2 (RF-2) [Deinococcus deserti
           VCD115]
          Length = 383

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 143/344 (41%), Positives = 204/344 (59%), Gaps = 6/344 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW +   A+ + +E   L   +     +        
Sbjct: 31  GSTFDIPGKTRRLNELDRELSDPELWNDQSRARQVTQESGTLRRIVESYSSLHSDAQGLN 90

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LE+A    D    +   +    ++  V+    E+L + +     A + V  GAGGTE+
Sbjct: 91  EMLEIA----DEEEREMLVEEQSSLQTRVDELYRETLFTMKHADTAAIVRVKGGAGGTEA 146

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   G++AG +S   +I+G  AYG +  E GVHRL
Sbjct: 147 QDWAGMLARMYMRWAERRGYKVDILDEQPGDQAGYQSIEFIIRGEKAYGMMAAEHGVHRL 206

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+DSN+RR TSF+S+ V P   ++ I I I +SD R D +R+ GAGGQ VNTTDSA
Sbjct: 207 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 266

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KRE        ++ ++ WG
Sbjct: 267 VRLTHLPTGIAVACQITRSQIKNAELALQILKQRLYDIEVKKREAEEAAARGAQAKVEWG 326

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            Q+RSYVL   Q +KD RT + K +P DVLDGDLD+ M A L  
Sbjct: 327 SQMRSYVL-DKQYIKDHRTGLMKHNPDDVLDGDLDELMWAGLEW 369


>gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9515]
 gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9515]
          Length = 354

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 138/344 (40%), Positives = 205/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD  + V +   L     +P  W N   AK  M     + + +  + + +  + D 
Sbjct: 2   LRIVFDVPSLVAKRKELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   + +  ++ E+   L  ++  ++  +F+ LLSGE D   A + ++AGAGGT+
Sbjct: 62  EASLELYSLDPEEEMIVESHLGLVTLRENLDKWEFQRLLSGEYDKESAIVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+      E  ++ +GEEAGIKS T  + G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +D SI +EI + D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDQSISLEIPDKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R    +  +    E  WG
Sbjct: 242 VRILHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VL+G LD F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMKETNDLDGVLNGGLDQFIHELLRM 345


>gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp]
 gi|166223589|sp|A4XR61|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           mendocina ymp]
          Length = 360

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 183/344 (53%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN   R   L     D  +     + +   +E   ++  I+  +E++    D      L
Sbjct: 9   LDNLSDRFEELTALLGDAEVISKQTQFRAYSKEYAEIEPVIATFRELRKVQSDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + + + K  +    +  Q   L     D  + YLEV AG GG E+ 
Sbjct: 69  LKES-DPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGRNVYLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEK+ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG VV+CQ+ERSQHKN+A+A   L AKL + +  +      I E+ K  +G G  
Sbjct: 248 ITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQ--EAAAHKEISETRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S S+V+ G ++  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLSEVMAGGVEAVIEPLLA 348


>gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 356

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 122/343 (35%), Positives = 192/343 (55%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   ++  +   +E +  + D     EL
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINSTKEL 64

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  D+  + +   + L    ++ +  +E  +   +     D  +  +E+ AGAGG E+ 
Sbjct: 65  -LSSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY  LK E GVHR+ 
Sbjct: 124 LFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P V + +++EI+ +D RID +R+ G GGQ VNTTDSAVR
Sbjct: 184 RVPTTEAGGRIHTSTATVAVLPEV-EEVDVEINPNDIRIDVFRSGGHGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I E  K+++G G +
Sbjct: 243 VTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMAL--QEQQKEIAEVRKSQVGTGER 300

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 301 SERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|298488301|ref|ZP_07006333.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157123|gb|EFH98211.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 293

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 164/291 (56%), Positives = 216/291 (74%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++
Sbjct: 1   MSSGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL
Sbjct: 61  QAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 121 RTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E 
Sbjct: 181 HVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L 
Sbjct: 241 TKSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASLK 290


>gi|623028|emb|CAA55563.1| unnamed protein product [Coxiella burnetii]
          Length = 361

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R S +     D  +  +    + L +E   L+  +   ++ Q      +   E 
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK-AIESAEE 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L+++ L+ E  +       +     D  + +LE+ AG GG E+ 
Sbjct: 68  MQQEKDPELRKLAEEELEQLTLKKEELEDQLNLLLVPKDPNDERNVFLEIRAGTGGNEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+++       S    G    
Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++GDLD  +   + 
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348


>gi|328794147|ref|XP_003252002.1| PREDICTED: peptide chain release factor 2-like, partial [Apis
           mellifera]
          Length = 276

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 140/268 (52%), Positives = 183/268 (68%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E   +LQ+++ E    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+A
Sbjct: 1   DEVETDLQKLQSEFHNYELDLLLSGKYDSHNALIEIHPGAGGTEAMDWGQMLLRMYQRYA 60

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +   FK E      GEEAG+KS +  + G NAYG +K E GVHRLVRISP+DS  RRHTS
Sbjct: 61  DICGFKFEINNYEPGEEAGLKSVSAKVCGKNAYGLMKSENGVHRLVRISPFDSAKRRHTS 120

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P +DDSI+++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG V   Q 
Sbjct: 121 FASVEVIPEIDDSIKVDINPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGFVTTSQA 180

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQ +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKD
Sbjct: 181 QRSQLQNRETAMNELRAKLFHLEEEKKRQHKQALKGDQKEIGWGSQIRSYVFHPYNLVKD 240

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           LRT  E +  S V+DG L  F+ + L  
Sbjct: 241 LRTGYETSDTSGVMDGKLQPFVYSYLQW 268


>gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
 gi|166223588|sp|Q1IEX1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
          Length = 360

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I+     +    D      L
Sbjct: 9   LDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIACYVGWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDA-DPDLREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+ + IEI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +  IA+  +          
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLA 348


>gi|18311184|ref|NP_563118.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110799590|ref|YP_696880.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110802815|ref|YP_699476.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|168205561|ref|ZP_02631566.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|168210131|ref|ZP_02635756.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|168213694|ref|ZP_02639319.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|168215831|ref|ZP_02641456.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
 gi|169344167|ref|ZP_02865149.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|182624062|ref|ZP_02951850.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|20139327|sp|Q8XIB9|RF1_CLOPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361525|sp|Q0TNB0|RF1_CLOP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361526|sp|Q0SQY1|RF1_CLOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|18145867|dbj|BAB81908.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110674237|gb|ABG83224.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110683316|gb|ABG86686.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|169297625|gb|EDS79725.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|170662868|gb|EDT15551.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|170711762|gb|EDT23944.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|170714864|gb|EDT27046.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|177910955|gb|EDT73309.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|182382220|gb|EDT79699.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
          Length = 360

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 127/351 (36%), Positives = 197/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  N    +   L+ K  DP +  N  E + L +E   L+  ++  KE ++   +   
Sbjct: 2   ILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEA 61

Query: 72  LLELALEEDDCSILQETSDNLQRI---KLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
             E+  EE D  + +  +  ++ +   K E+E + Q   L     D  + ++E+  GAGG
Sbjct: 62  NKEMLSEESDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++AEK ++K E +  ++ +  G K    +IKG  AY  LK E G 
Sbjct: 122 DEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESGA 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V D +EIEI++ D +ID +RASG GGQ VNTTD
Sbjct: 182 HRVQRVPDTESSGRIHTSTATVAVLPEV-DDVEIEINDKDIKIDVFRASGNGGQCVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQ KNK +A  +LRA+L+  E  + E +A I E  K+++G
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+        L+GD+D+ + A +   +
Sbjct: 299 TGDRSERIRTYNY-PQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQ 348


>gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223525|sp|A0KMZ8|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 362

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 186/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L RE   L++ +   ++ +    +     ++
Sbjct: 9   LEGLIERHEEVQAMLGEPDVAADQDRYRALTREYAQLEDIVHAFQQFRQAEENLDATRQM 68

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + L       + + +  Q   L     D N+ YLE+ AGAGG E+ 
Sbjct: 69  -LEEDDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ ++   +  +DGE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVEGEHVYGRLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++ +IEI+ S+ +IDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKN+A+A ++L A+L   E ++          +    G    
Sbjct: 248 ITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + + R N+      ++++GDLD  +   +
Sbjct: 308 RIRTYNY-PQGRLSEHRINLTLYRLGEIMEGDLDCVISPMI 347


>gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1]
 gi|166223590|sp|A5VYG5|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           putida F1]
          Length = 360

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +  IA+  +          
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305]
 gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305]
          Length = 360

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 182/339 (53%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +S     +    D      L
Sbjct: 9   LESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHSDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E  +  +    ++E   Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +E A+   +         +IR
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGSGDRSDKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 309 TYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440]
 gi|32171521|sp|Q88PW5|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440]
          Length = 360

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +  +A+  +          
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNALASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  D+L G +D  ++  LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348


>gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
          Length = 355

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 120/339 (35%), Positives = 178/339 (52%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL   
Sbjct: 8   IEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEELLDT 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + D    +   + L R K + E  + +     L     D  +  +E+ AGAGG E+  +A
Sbjct: 68  DLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+ 
Sbjct: 128 AELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +E+EI E D  IDT+RA GAGGQHVN T+SAVRI H
Sbjct: 188 VTESGGRIHTSTATVAVLPEV-EDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
            PTG+VV CQ ERSQH N+ +A  +LRA+LY+  +  +++EI +   S         +IR
Sbjct: 247 KPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +       VLDG+LD+ + A + 
Sbjct: 307 TYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|226315063|ref|YP_002774959.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
 gi|254790866|sp|C0Z828|RF1_BREBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226098013|dbj|BAH46455.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
          Length = 358

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 182/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                +R   +     DP +  +    + L +E+  L+  ++  +E +    ++ D   +
Sbjct: 5   LSAVEERFEEVTNLLCDPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDDAKAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+++   +++   + L   K ++E   +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LEEKLDDEMREMVKLELNELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A +L RMYTR+AE+  FK E LE    +  G K     + G  AY  +K E G HR+ 
Sbjct: 125 LFAAVLFRMYTRFAERNAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +E+E+ E D RIDT+ +SGAGGQ VNTT SAVR
Sbjct: 185 RIPATESGGRIHTSTATVLVLPEA-EDVEVEVHEKDIRIDTFCSSGAGGQSVNTTKSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTG++V CQ E+SQH NK +A  +LRA+LY+  +Q++   A+    S    G    
Sbjct: 244 VTHIPTGIMVSCQDEKSQHSNKDKALRVLRARLYDFYMQQQNAEADATRKSLVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VL+G++D+ +   +  ++
Sbjct: 304 RIRTYNY-PQSRVTDHRIGLTLHRLESVLEGEMDEVIDNLIMHEQ 347


>gi|188995885|ref|YP_001930137.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
 gi|188595565|dbj|BAG34540.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
          Length = 352

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 176/343 (51%), Gaps = 7/343 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R   ++T   DP +  ++     L +E + L+   +  ++ ++ L +        
Sbjct: 2   DGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAKHTM 61

Query: 77  LEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +E D  + +   + L      +    E  +   + +   D  +A +E+  G GG E+  
Sbjct: 62  AKESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGDEAAL 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++ E + ++ E  ++ +G   G K     +KG   YG LK E GVHR+ R
Sbjct: 122 FAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVHRVQR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V++
Sbjct: 182 VPATETQGRIHTSAATVAVLPEA-EEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQL 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
           TH PTG+VV CQQ RSQ  N+  A  MLR+KLY++EL K  E IA   ++  +      +
Sbjct: 241 THKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEAIAARRKTMVSTGDRSAK 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   V D R N+   + S V+DG++  F+ A +  +
Sbjct: 301 IRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAE 342


>gi|330828702|ref|YP_004391654.1| peptide chain release factor 1 [Aeromonas veronii B565]
 gi|328803838|gb|AEB49037.1| Peptide chain release factor 1 [Aeromonas veronii B565]
          Length = 362

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L RE   L++ +   +  +    D     ++
Sbjct: 9   LEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQLEDIVHAFQRYRQAQDDLETT-QM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + L   K  +E      Q   L     D N+ YLE+ AGAGG E+ 
Sbjct: 68  MLEEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ ++   +  +DGE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++ +IEI+ SD +IDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKN+A+A ++L A+L   E ++          +    G    
Sbjct: 248 ITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + + R N+     S++L+GDLD  +   +
Sbjct: 308 RIRTYNY-PQGRLSEHRINLTLYRLSEILEGDLDCVITPLV 347


>gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Vibrio angustum S14]
 gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14]
          Length = 362

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +  V+R   +     D  +  +    + L +E   L+      +  Q    D +  
Sbjct: 6   LVKLETLVERYEEVQHLLGDASVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGT 128
            E+A E DD  + +   + ++  K E+E    + + LL      D  + ++E+ AGAGG 
Sbjct: 66  EEMAQE-DDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+++AE R ++ E +  +  E+ G K     + G   YG LK E G H
Sbjct: 125 EAGIFAGDLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + ++   EI+  D +IDT+RASGAGGQHVNTTDS
Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR  E A+   +      
Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              +IR+Y   P   V D R  +     ++V++GDLD  ++
Sbjct: 305 RSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQ 344


>gi|307823419|ref|ZP_07653648.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
 gi|307735404|gb|EFO06252.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
          Length = 361

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 186/344 (54%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +     +P +  N  + + L +E   ++  +   K  Q  L       E+
Sbjct: 9   LENLCERYDEIAALLSEPEVQGNQNKFRSLSQEYAQINPLVDCYKRYQQTLESLASAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  + +   + +   + ++E  + E     L     D+ + ++E+ AG GG E+ 
Sbjct: 69  ANDS-DPELREMAKEEVNDAENQLEAIEHELQVLLLPKDPNDNRNIFIEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY R+AE++ ++TE +    G+  G K   L + G + Y  LK E G HR+ 
Sbjct: 128 IFSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRVAGKDVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD+   I+I+ +D ++DT+RASGAGGQH+N T+SA+R
Sbjct: 188 RVPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDTFRASGAGGQHINKTESAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTGVVV+CQ ERSQHKN+A+A ++L ++L   E +K    A    + K ++G G  
Sbjct: 248 ITHVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKH--HAEQSATRKLQVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+      D++ G L+  ++  ++
Sbjct: 306 SERIRTYNY-PQGRLTDHRINLTLYKLDDIMQGGLEQVIQPLIS 348


>gi|289626068|ref|ZP_06459022.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289646233|ref|ZP_06477576.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 293

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 164/291 (56%), Positives = 216/291 (74%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++
Sbjct: 1   MSSGLADAKDLLLMSAEEEDQAAVDDVATEVERLRESLEKLEFRRMFSGEMDPNNAYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL
Sbjct: 61  QAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 121 RTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E 
Sbjct: 181 HVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L 
Sbjct: 241 TKSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASLK 290


>gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
 gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
          Length = 355

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 120/339 (35%), Positives = 176/339 (51%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL   
Sbjct: 8   IEEKYLELEKKIADPDIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEELLDT 67

Query: 79  EDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + D    +   + L   K + E      +   L     D  +  +E+ AGAGG E+  +A
Sbjct: 68  DIDEDFEKLVKEELNWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ R+ 
Sbjct: 128 AELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + IE+EI E D  IDT+RA GAGGQHVN T+SAVRI H
Sbjct: 188 VTESGGRIHTSTATVAVLPEV-EDIEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
            PTG+VV CQ ERSQH N+ +A  +LRA+LY+  +  +++EI +   S         +IR
Sbjct: 247 KPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +       VLDG+LD+ + A + 
Sbjct: 307 TYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344


>gi|257452270|ref|ZP_05617569.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|257465930|ref|ZP_05630241.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917086|ref|ZP_07913326.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317058813|ref|ZP_07923298.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313684489|gb|EFS21324.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313690961|gb|EFS27796.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 326

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 156/324 (48%), Positives = 215/324 (66%), Gaps = 1/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +   W +   +  +++        ++  + + + + +  +L+E   E  D     E  + 
Sbjct: 2   EEGFWNDKRSSSAVIKTMNEEKALLASFQSLVEEMEEEEVLIEFV-EAGDEMSQIELEEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +++  ++E      LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW   +K+K
Sbjct: 61  HKQLLKDMESFSTSLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCNDKKYK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V
Sbjct: 121 VEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VD+S+E+EI  SD RIDTYRASGAGGQHVN TDSAVRITH PTG+VV CQ+ERSQ  
Sbjct: 181 VPEVDESVEVEIEASDIRIDTYRASGAGGQHVNMTDSAVRITHFPTGIVVTCQKERSQLS 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KL E+EL+K+EE     +  ++EIGWG QIRSYV QPY MVKD RT +E
Sbjct: 241 NRETAMKMLKSKLLEIELKKKEEEMKKIQGEQSEIGWGSQIRSYVFQPYTMVKDHRTGVE 300

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   V+DGDLDDFM   L   K
Sbjct: 301 IGNIKAVMDGDLDDFMNGYLRWNK 324


>gi|306820801|ref|ZP_07454426.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551191|gb|EFM39157.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 357

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++ S L  K  DP +  N  + + LM+E   L   +   +E      D     E+
Sbjct: 5   LGAVKEKFSELEKKISDPEIINNQEQWQKLMKEHADLSPVVKKYEEYLKANDDIKGAKEI 64

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +     + L    + +   ++  +   L     D  +  +E+  GAGG E+ 
Sbjct: 65  IANESDEDLRDLAKEELSGLEEDLTKIIDELKILLLPKDPNDDKNVIVEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A +L RMY+ +A  R++K E +  ++ E  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAGVLFRMYSMYAANRRWKVELMSSNETEIGGYKEVVFMITGKGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +E+ +  +D R+D +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETESQGRIHTSTVTVAVLPEA-EDVEVNLDLNDVRVDVFRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+V+  Q E+SQ KNK +A+ +L+AKLY++EL+K++    +    K+++G G  
Sbjct: 244 LTHIPTGIVISMQDEKSQLKNKDKAFKILKAKLYDMELEKKQ--KEMASQRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V + R  +        L+GDLD+ + A +   +
Sbjct: 302 AERIRTYNY-PQGRVSEHRIGLNLYKLESFLNGDLDEIIDALITTDQ 347


>gi|209694372|ref|YP_002262300.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
 gi|238058709|sp|B6EHH5|RF1_ALISL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208008323|emb|CAQ78475.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
          Length = 362

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L RE   L+      +  +    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPGVIGDQNKFRALSREYSQLEEVTQCFQAYEKVQEDLVAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K   E    + + LL      D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKEAKEASERLTDELQVLLIPKDPNDERNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +  H  E+ G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGNLFRMYSRFAEKKGWRIEVMSSHASEQGGFKEMIAKVSGDGAYGILKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  +I V   + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPETESQGRVHTSACTIAVMAEIPEADLPEIKSSDLKIDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG VV+CQ ERSQHKNKA+A ++L A++ + E  +R  + +    +    G    
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEARRAAVVSDTRRNLLGSGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++GDL   ++  +
Sbjct: 308 RIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDLAALIEPVV 347


>gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202]
 gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202]
          Length = 360

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 182/339 (53%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +S     +    D      L
Sbjct: 9   LESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHSDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E  +  +    ++E   Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +E A+   +         +IR
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGSGDRSDKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 309 TYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|52082235|ref|YP_081026.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52787627|ref|YP_093456.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|319648109|ref|ZP_08002326.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
 gi|81608865|sp|Q65DV1|RF1_BACLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52005446|gb|AAU25388.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52350129|gb|AAU42763.1| PrfA [Bacillus licheniformis ATCC 14580]
 gi|317389744|gb|EFV70554.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
          Length = 356

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 116/352 (32%), Positives = 185/352 (52%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           + D   +   R   LN    DP +  +  + +   +E+  L   +   +  +   ++L D
Sbjct: 1   MLDRLKSIEDRYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLSD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              +LE  L+ D   +++E    LQ  ++E    Q + LL      D  +  +E+   AG
Sbjct: 61  AKAMLEEKLDSDMREMVKEEISELQE-EIESLTDQLKVLLIPKDPNDDKNVIMEIRGAAG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEANMTGTGGYKEIIFMINGNGAYSRLKYENG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +
Sbjct: 239 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQQEAQAEYDQNRKSAV 296

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 297 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIVEDQ 347


>gi|327312646|ref|YP_004328083.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
 gi|326945641|gb|AEA21526.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
          Length = 371

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    D D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTEETQLAFDFYKDE--LVTEEEVDAAYAKALKVIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365


>gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259411|gb|EDS73377.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
          Length = 355

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R + ++    +P +  N      L++E  HL+  +   K+  D +     
Sbjct: 1   MLDKLKSIEKRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLES 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGG 127
             E+  + DD    +   +++  +  + E   ++ + LL      D  +  +E+ AG GG
Sbjct: 61  NKEMLNDSDDDDFKEMILEDISSLNEQKEGLEQEIKILLIPKDPNDDKNVIVEIRAGVGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMYTR+AE+ ++K E L  ++    G K A   I+G  AY  LK E G 
Sbjct: 121 DEAALFAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S+ R HTS  ++ V P   + +E+ I  +D RID YR+SG GGQ VNTTD
Sbjct: 181 HRVQRIPDTESSGRIHTSAITVAVLPEA-EDVEVNIDPNDLRIDVYRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIP+G+VV CQ E+SQ KNK +A  +L+A+L+E+E +K++E   I  + K++IG
Sbjct: 240 SAVRITHIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQEA--IASNRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     +DVLDGD+D+F+   +   +
Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRVGLTLYKLNDVLDGDIDEFIDTLIVQDQ 347


>gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT]
 gi|119361559|sp|Q1GYE8|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus
           flagellatus KT]
          Length = 360

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  LN       +  ++   + + RE   +   +   +  +    D      +
Sbjct: 9   LATLSERLDELNRLLSSEDVTNDIDNYRKITREHAEITPIVEQFRAYEQAEIDIKEAQAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     QE ++  ++   ++E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +  ++ E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ  RSQH NKAQA  +L A++   ++   E+ + I    ++ IG G    +
Sbjct: 249 FPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVD--EQQSKIASERRSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       + +GD+D+ + A  A
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINALAA 346


>gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|119361581|sp|Q3IK95|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 361

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 118/340 (34%), Positives = 184/340 (54%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP + ++    + L +E   L+  +      Q    D +   E+
Sbjct: 9   LEILVERYEEVQALLSDPSVIRDQNRFRALSKEYSDLEEVVKTFLSYQQAQQDVISAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  I +   +  +  K ++    +  Q   L     D+N+ YLEV AG GG E+ 
Sbjct: 69  LKDS-DPDIREMAQEEYKEAKAQILTIEDEIQVLMLPKDPKDNNNVYLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE +K+K + +  ++GE  G K     I G   +G LK E GVHR+ 
Sbjct: 128 IFAGDLFRMYSRYAETKKWKVDVVTTNEGEHGGYKEIIANISGEGVFGQLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVMAEVPEAEAIEINSADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR+   A+   +         
Sbjct: 248 ITHIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRDAAEASERRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+     ++V+ GDL   ++  
Sbjct: 308 RIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLSCIVEPL 346


>gi|212213424|ref|YP_002304360.1| peptide chain release factor 1 [Coxiella burnetii CbuG_Q212]
 gi|238058711|sp|B6J390|RF1_COXB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212011834|gb|ACJ19215.1| bacterial peptide chain release factor 1 [Coxiella burnetii
           CbuG_Q212]
          Length = 361

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R S +     D  +  +    + L +E   L+  +   ++ Q      +   E 
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK-AIESAEE 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L+++ L+ E  +   + LL      D  + +LE+ AG GG E+ 
Sbjct: 68  MQQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDELNVFLEIRAGTGGNEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+++       S    G    
Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++GDLD  +   + 
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348


>gi|170717669|ref|YP_001784745.1| peptide chain release factor 1 [Haemophilus somnus 2336]
 gi|189039976|sp|B0UUE6|RF1_HAES2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168825798|gb|ACA31169.1| peptide chain release factor 1 [Haemophilus somnus 2336]
          Length = 360

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 190/340 (55%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     +  +  +  + +   +E   L++ +       + L +N+   +L
Sbjct: 9   LESLKERHEELEALLGESSVINDQDKFRAYSKEYAQLEDVVKCFARW-NWLNNNIEETQL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            L++ D   + E      + ++E   +Q + LL      D  +AYLE+ AG GG E+  +
Sbjct: 68  LLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTGGDEAGIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+
Sbjct: 128 AGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P + ++   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 188 PKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQI 312
           HIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ +  A+   +         +I
Sbjct: 248 HIPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQADTRRNLLGSGDRSDKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|206895563|ref|YP_002247293.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738180|gb|ACI17258.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 370

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 133/332 (40%), Positives = 204/332 (61%), Gaps = 1/332 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+    LS +    E P +W +  +A  + R+ Q L+  I  +++I++ L D    LEL
Sbjct: 26  LDDKKAELSDVRKVYEKPDIWSDPDKAVAVARKVQRLEEEIERVEQIENLLKDLDAALEL 85

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             E  D  + +     L+ ++  +E  +  +L +   D+NDA L +HAGAGG ++ DW  
Sbjct: 86  LQEGYDEELFEHALATLKELQQRIELFRLVTLFTEPYDTNDAILMLHAGAGGVDAMDWTQ 145

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           ML+RMY RWAE+  F+TE ++I  GEEAG+KS T+ ++G  AYG+L+ E+GVHRLVR+SP
Sbjct: 146 MLMRMYLRWAERMGFETEIVDISRGEEAGVKSCTVFVRGSYAYGYLRAEKGVHRLVRLSP 205

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D++ RRHTSF+         + +E+EI+  D  ++T+R+ GAGGQH N T+S VR+ H 
Sbjct: 206 FDADHRRHTSFAL-VDVVPDVEDVEVEINPDDIEVETFRSGGAGGQHQNKTESGVRLIHK 264

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+ V   +ERSQ +N+ +A  +LRA++++   ++R++             WG QIRSY
Sbjct: 265 PTGITVTVTEERSQLQNRERAMRILRARVHQYHEEERKKSLEEIRGDVKSASWGNQIRSY 324

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           V  PY MVKD RT   +    +V+DGD+ DFM
Sbjct: 325 VFHPYNMVKDHRTGYSRGDIDNVMDGDITDFM 356


>gi|289423330|ref|ZP_06425138.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
 gi|289156261|gb|EFD04918.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
          Length = 354

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  +    + LM+E   L+  +   +E +          ++  E
Sbjct: 8   LEDKYKELSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAESKQILEE 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +     L   + ++    +  +   +     D  +  +E+  GAGG E+  +A
Sbjct: 68  ESDEDLRELAKMELSEAESQIVDIEDELKLLLVPKDPNDEKNVIVEIRGGAGGDEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +KT  +  ++    G K  + LIKG  AY  LK E GVHR+ RI 
Sbjct: 128 GDLFRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESGVHRVQRIP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V D +E++I+  D R D +RASG GGQ VNTTDSAVR+TH
Sbjct: 188 TTESGGRIHTSTATVAVLPEV-DDVEVQINPEDLRFDVFRASGNGGQCVNTTDSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIR 313
           IPTG VV CQ E+SQ KNK +A  +L+A+LY+  L  +++EI+   +S         +IR
Sbjct: 247 IPTGEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQKEISAERKSQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R N+        +DGD+D+ +   + + +
Sbjct: 307 TYNF-PQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITVDQ 347


>gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804]
 gi|229470349|sp|A9IER8|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii]
          Length = 360

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 179/339 (52%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P    ++   + L RER  L+  +    +      D     E+
Sbjct: 9   LEQLSHRLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFARTEDDLATAQEM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ + E     +R++      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LADPDMKAMAEDEIKTGRERLEKLESELQVLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+R ++ E +     E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+ + A   +S         +IR
Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQSKEAAERKSLVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+       +++GDL++   A +A
Sbjct: 309 TYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 346


>gi|317121004|ref|YP_004101007.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
 gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
          Length = 381

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  +  DP +  +    + L +ER  L+  +   +  ++   D      L
Sbjct: 30  LAARIGRFDQLERELADPAVAADPRRWQPLAQERAELEPLVDAYRRWREAGADLEAARAL 89

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E DD       +  ++R++ E +  +    SLL      D  D  +E+ AG GG E+ 
Sbjct: 90  LRETDDADEHAYLTAEVERLEAERQRLERTLRSLLLPRDPRDQRDVIMEIRAGTGGEEAA 149

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ ++TE +   + +  G K     + G  A+  LK E GVHR+ 
Sbjct: 150 LFAGDLFRMYQRYAERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLKHESGVHRVQ 209

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +E++I   D  IDT+ ASG GGQHVN T+SAVR
Sbjct: 210 RVPVTEAAGRIHTSTATVAVLPEA-EEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVR 268

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH PTG+VV CQ ERSQHKN+A+A  +LRA+L +    +++EE++    S         
Sbjct: 269 ITHKPTGIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEELSQQRRSQVGTGERSE 328

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y  +    V D R  +      +++DGDLD+ + A  A
Sbjct: 329 KIRTYNFRE-NRVTDHRIGLTLYRLQEIMDGDLDELLDALAA 369


>gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
 gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
          Length = 358

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 194/349 (55%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ + R   L ++  +P +  N    + LM+E+  +   +   KE +     + D
Sbjct: 1   MFDKLEDLLIRYEELMSELSEPDVANNPERFRKLMKEQSDILPIVEAYKEYKQCKQNIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L +LE   +E+   + +E  ++ +    E+E   +   L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLEEESDEEMRELAKEELNDAKNRVAELENELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE + +KTE +E  D    G+KS T +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYQHYAETKNWKTEIMECDDTGIGGMKSVTFMITGAGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++++I E D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EDVDVQIDEKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KL++LE QK  +  A + +S     
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLFDLEQQKAHDAEAELRKSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +++GD+ + + A +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|330807738|ref|YP_004352200.1| peptide chain release factor 2 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375846|gb|AEA67196.1| Putative Peptide chain release factor 2 [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 293

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 164/291 (56%), Positives = 213/291 (73%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL++A+EE+D   + +    L R+   +   +F  + SGE D N+AYL++
Sbjct: 1   MSSGLADCRDLLDMAVEENDEGAVGDVVAELTRLDENLAKLEFRRMFSGEMDMNNAYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL
Sbjct: 61  QAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEIEI+ +D RIDTYR+SGAGGQ
Sbjct: 121 RTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E 
Sbjct: 181 HVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT+IE++    VLDGD+D+++ A+L 
Sbjct: 241 TKSDIGWGHQIRSYVL-DASRIKDLRTSIERSDCDKVLDGDIDEYLIASLK 290


>gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
 gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           K40]
 gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
          Length = 360

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 180/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
 gi|238688639|sp|B1KDU3|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
          Length = 361

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 186/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ +      Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPSVIADQERFRALSKEYSQLEDVVKSFTAFQQATEDLEAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  + +   + ++  K  +E      Q   L     D N+A++E+ AGAGG E+ 
Sbjct: 69  -LNEDDPELKEMAQEEMKEAKSVLETLEDELQILLLPKDPNDDNNAFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY++++E  +++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYSESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         +    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEESTRRNLVSSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R N+     ++V++G LD  ++  +
Sbjct: 308 RIRTYNF-PQGRMSDHRINLTLYRLNEVMEGVLDVIIEPLI 347


>gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
 gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
          Length = 361

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQPIIT 347


>gi|300087667|ref|YP_003758189.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527400|gb|ADJ25868.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 327

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 5/320 (1%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W++   ++ +MR    L   +   + ++ RL +   L  L     D  + Q+     +
Sbjct: 6   GFWEDSDNSQKVMRRLTGLKKTVEQWRSLERRLNELAELDALG----DPEMAQDVDAETE 61

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E++  +FE   SGE D  +A L +HAGAGG ESQDWA MLL MY +W E+R +  E
Sbjct: 62  AVSDELDRLEFELSYSGEYDERNALLSIHAGAGGVESQDWAEMLLAMYVKWGERRDYDVE 121

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            LE   G+EAGIKS T   +G  AYG L+ E GVHRL+R+SP+DS+  RHTSF+ + V P
Sbjct: 122 ILETSAGDEAGIKSVTAEFRGRYAYGNLRSEHGVHRLIRLSPFDSDHARHTSFALVEVMP 181

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            V++  E+EI+  D +++ +RASGAGGQ+V    SAVR+TH P+G+VV  Q ERSQH+N+
Sbjct: 182 EVEEDAEVEINPDDIKLEAFRASGAGGQNVQKVSSAVRLTHTPSGIVVTAQTERSQHQNR 241

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A ++LRA+L + ++ ++E      +  +    WG QIRSYVL PY+MVKD RT +E  
Sbjct: 242 EVAMSLLRARLLQRKIAEQEAEKARLKGERISNEWGSQIRSYVLHPYKMVKDHRTGMETG 301

Query: 334 SPSDVL-DGDLDDFMKATLA 352
           +   VL +G+++ F++A L 
Sbjct: 302 NTQAVLEEGNIEMFIEAYLK 321


>gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4]
 gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7]
 gi|119361605|sp|Q0HFC8|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361606|sp|Q0HYK8|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-4]
 gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-7]
          Length = 363

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 118/340 (34%), Positives = 187/340 (55%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q  L D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQALADLESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K E+E  + E     L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++R+Y   P   V + R N+     ++V++GDLD  +   
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPL 346


>gi|325860237|ref|ZP_08173362.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
 gi|325482324|gb|EGC85332.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
          Length = 371

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    D D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTEETQLAFDFYKDE--LVTEEEVDAAYAKALKVIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRI 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365


>gi|325268643|ref|ZP_08135273.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
 gi|324989171|gb|EGC21124.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
          Length = 371

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    D D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKEIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTDEAQLAFDFYKDE--LVTEEEVDTAYDKAFKVIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365


>gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
 gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
          Length = 361

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIIT 347


>gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 358

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 188/345 (54%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  ++   L TK  DP +  N    + L +E   +   +   +E +         L L
Sbjct: 8   LDDLERKYQELETKLSDPDVISNPAVLQRLAKEHSEMSKVVEKYREYRQAQKRLEEALAL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  + +   +   ++K  VE  + E           D     +E+ AGAGG E+ 
Sbjct: 68  -TEEDDEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDERSVIVEIRAGAGGEEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++++K E L  ++    G K     ++G +AY  LK E GVHR+ 
Sbjct: 127 LFAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQDAYSVLKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   D +++EI   D +IDT+RASGAGGQ+VN TDSAVR
Sbjct: 187 RVPVTEASGRIHTSTATVAVLPEP-DEVDVEIRPEDLKIDTFRASGAGGQYVNMTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           ITHIPTG+VV CQ ERSQ KN+A+A  +LRAKLY++E+++++E  A+             
Sbjct: 246 ITHIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQEAMASERRGQIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +   +  ++L+GDLD+ + A     +
Sbjct: 306 RIRTYNF-PQNRVTDHRIGLTLHNLDEILEGDLDELLYALATADQ 349


>gi|260593398|ref|ZP_05858856.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
 gi|260534674|gb|EEX17291.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
          Length = 372

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 205/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ + + L      D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  ITERTDALHRYLGIDEKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTDEVQLAFDFYK--DNLVTEEEVDTAYNKALKAIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTISDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis
           MB4]
 gi|22096035|sp|Q8RD98|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis
           MB4]
          Length = 356

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 188/342 (54%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L +     EL
Sbjct: 5   LQAIEDRYVELSQKISDPNVISNVEEWRKYVKEHAAIEDIVLKYREYKKVLEEIKATEEL 64

Query: 76  ALEEDDCSILQE---TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              +D+          S   ++ +  +E  +   L     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSQDEELKEMAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYT +AEK+ +K E +  +  +  G K     I G  AY  LK E GVHR+ R
Sbjct: 125 FAYDLFRMYTMYAEKKGWKVEIMSANKTDIGGFKEVIFSISGKGAYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS +++ V P   + +++EI+ +D +ID +R+SG GGQ VNTTDSAVR+
Sbjct: 185 IPTTEAGGRIHTSTATVAVLPEA-EEVDVEINPNDIKIDVFRSSGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I E+ K+++G G   
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMAL--KEQQREIAEARKSQVGTGERS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R  +      +VLDG+LD+ + A +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKLQEVLDGELDEIIDALI 342


>gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 360

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 181/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +      +    D      L
Sbjct: 9   LESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNNDIEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E + Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E  +  + A   ++ +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVE--QERQAAEQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
 gi|259585227|sp|C3KDC6|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
          Length = 360

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 180/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++  K +     D      L
Sbjct: 9   LDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLTKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   +   + +L      D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y       V D R N+   S  ++L G +D  ++  LA
Sbjct: 306 SERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLA 348


>gi|260888149|ref|ZP_05899412.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|330840016|ref|YP_004414596.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|260862178|gb|EEX76678.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|329747780|gb|AEC01137.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
          Length = 355

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 183/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      ++   L +   DP +  ++ + + L RE   L   +   +E +      L 
Sbjct: 1   MLDKLHAVEEKYRELESLISDPAVLADMPKWQKLSREHAQLAPVVEKYREYKKVREGLLE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
              +  +  D  + +   + +  ++  +E  + E     L     D+ +  +E+  G GG
Sbjct: 61  AKAIFDDNPDADMRRLAEEEIAELRPRLEALERELPILLLPKDPNDAKNVIVEIRGGVGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE+R ++ + ++ +  E  G K     + G  AY +LK E G 
Sbjct: 121 EEAALFAGDLFRMYARYAERRGWRVDVIDKNATEIGGFKEIAFSVDGAGAYSFLKYESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P  ++      + +D RIDTY ASGAGGQ+VN T+
Sbjct: 181 HRVQRVPVTESSGRIHTSAVTVAVLPEAEEVEVEI-APADLRIDTYCASGAGGQYVNRTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +A+RITH+PTG+VVQCQ E+SQ KNK +A  +LRA++  LE  + E+ A +    K+++G
Sbjct: 240 TAIRITHLPTGIVVQCQDEKSQLKNKEKAMRVLRARI--LEAAREEQAATVAADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     + VLDGDLD+ + A +   +
Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRIGLTLHKLAAVLDGDLDELLAALITADQ 347


>gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
          Length = 361

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      ++++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEIMNGKIDELIQPIIT 347


>gi|168334105|ref|ZP_02692318.1| peptide chain release factor 1 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 356

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 126/349 (36%), Positives = 201/349 (57%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD     V +   ++ K  +P +  + +  + LM+E   L   +   KE +     + D
Sbjct: 1   MFDQIKELVVKFENISAKVNEPAVIADQVTWRALMKEISTLSPIVEKYKEYKTVLTAIDD 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L++LE  L++D  +++ +E SDN +R++   E  +   L +   D  +  +E+  GAGG
Sbjct: 61  SLLMLEEKLDDDMLALVKEELSDNKKRVEPLEEELKILLLPTDPNDEKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE+ K+KTE ++I++    G K A  ++KG  AY  LK E GV
Sbjct: 121 DEAALFAADLYRMYHRFAERSKWKTELMDINENGIGGFKEAIFMLKGDGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ + P   + +++E++ +D ++D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTVTVAIMPEA-EDVDVEVNPNDVKVDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEI 306
           SAVR+TH+PTG+VV CQ E+SQ KNK +A  +LRAKLYELEL K++  IA   +S     
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKAMKVLRAKLYELELNKQKALIAAEKKSQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       VLDGDL++ +       +
Sbjct: 300 DRSERIRTYNF-PQGRVTDHRVGLTVHKLEQVLDGDLEEIISTLTTFDQ 347


>gi|160891387|ref|ZP_02072390.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270295480|ref|ZP_06201681.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478476|ref|ZP_07937636.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
 gi|156858794|gb|EDO52225.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270274727|gb|EFA20588.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905365|gb|EFV27159.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
          Length = 371

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  D   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLTDEVQLAFDFYKDE--LVTEEEVDDAYAKAITAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEPARMSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KN+  A  +LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENALRLLRSMLYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
 gi|189039985|sp|B0KNE4|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
          Length = 360

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 179/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++   +  KE      D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++    +  IA+  +          
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  D+L G ++  ++  LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLA 348


>gi|161524328|ref|YP_001579340.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189350916|ref|YP_001946544.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|160341757|gb|ABX14843.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189334938|dbj|BAG44008.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
          Length = 248

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
 gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
          Length = 358

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 129/351 (36%), Positives = 193/351 (54%), Gaps = 15/351 (4%)

Query: 13  LFDW----DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +FD     D  V R + LN +  DP +  N  + + L++E   L   +S  +E +  L  
Sbjct: 1   MFDLTKKLDKLVDRYNELNKEISDPDVINNSEQYQKLLKEHGKLKEIVSKYREYKKVLSR 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124
                 +  EE++  + +     L+ +    E  + E     L     D  +  +E+ AG
Sbjct: 61  VEEAHSIIEEEEEQEVRELAEMELKELTPRKEKMEDELTYMLLPEDPNDEKNVIVEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +  +     G K     ++G N Y  LK E
Sbjct: 121 AGGDEAGLFAADLYRMYSRYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +++ V P   + ++++I  +D RID YR+SG GGQ VN
Sbjct: 181 SGVHRVQRVPTTESGGRIHTSTATVAVLPEA-EEVDVDIDPNDLRIDVYRSSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH PTG+VV CQ E+SQHKNKA+A  +LRA+L EL   ++E+ A I E+ K+
Sbjct: 240 TTDSAVRITHEPTGLVVSCQDEKSQHKNKARAMRILRARLKEL--MEKEKQAEIDEARKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IG G    +IR+Y   P   V D R N+     +D+LDG+LD  +   + 
Sbjct: 298 QIGSGDRSEKIRTYNF-PQGRVSDHRINLTIHQLNDILDGNLDLIIDNLIK 347


>gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
 gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
          Length = 364

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 186/342 (54%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   ++    D  +  N  + + L RE   ++  +   +  Q  L D     EL
Sbjct: 9   LEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLVDINEAREL 68

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTES 130
           + + D D  + +   + L   +   E    E     L     D  + +LEV AG GG E+
Sbjct: 69  SKDGDADADMREMAEEELHTAQQASEELDAELQGLMLPKDPNDGKNVFLEVRAGTGGDEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+R+++ E L   +GE  G K     + G   YG LK E GVHR+
Sbjct: 129 AIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARVAGSGVYGTLKFESGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D++  +EI++ D R+DT+RASGAGGQHVN TDSA+
Sbjct: 189 QRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQHVNKTDSAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITH+P+G+VV+CQ+ERSQHKN+A+A ++L ++L  +E ++  + +A   +S        
Sbjct: 249 RITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERAHQSMAETRKSLVGSGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+      +V+ GDLD  +K  L
Sbjct: 309 ERIRTYNF-PQSRVTDHRINLTLYKLDEVIAGDLDSVVKPLL 349


>gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 373

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 138/352 (39%), Positives = 206/352 (58%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L       D  N V +   L      P  W N  +AK  M     + + +  + +
Sbjct: 13  ELTKRLGNAQDCLDVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNLDDVRDQLQLLDK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D    LEL   E +  ++ E+   L  ++  ++  +F+ LL GE D   A + +
Sbjct: 73  WKMFISDAEASLELYSLEPEEEMIVESHQGLVTLRENLDKWEFQRLLCGEYDKEAAIVSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDW  +LLRMY+RW +      E  ++ DGEEAGIKS T  + G  AYG+L
Sbjct: 133 NAGAGGTDAQDWVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKSVTFEVNGKYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ + V P +D SI ++I + D  I T R+ GAGGQ
Sbjct: 193 QNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDQSISLDIPDKDLEITTSRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R    +  + 
Sbjct: 253 NVNKVETAVRIVHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRASEISDIKG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              E  WG QIR+YV  PYQMVKDLRT  E      VL+G LD F+   L +
Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQFIHELLRM 364


>gi|89898648|ref|YP_515758.1| peptide chain release factor 2 [Chlamydophila felis Fe/C-56]
 gi|89332020|dbj|BAE81613.1| hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 315

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 149/309 (48%), Positives = 202/309 (65%), Gaps = 2/309 (0%)

Query: 46  MRER-QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           M ER   L   +S  +  + ++ +    L  +    D    ++        +  +   + 
Sbjct: 1   MSERIASLKRQVSDYQNFKSKVDNLTFFLNDSEASSDPEFREDLEKEFSICENILSEWEI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           + LLSGE D N  +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  DG+ AG
Sbjct: 61  QRLLSGEVDKNSCFLTINAGAGGTESCDWVEMLFRMYCRWASEHRWKVEVIDRQDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK  T+   G  AYG+ K E+GVHRLVRISP++SN++RHTSF+S+ VYP +DD IEI+I 
Sbjct: 121 IKHVTVKFSGDYAYGYAKAERGVHRLVRISPFNSNAKRHTSFASVDVYPEIDDEIEIDIQ 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG+ V CQ ERSQ +N+     MLRA++
Sbjct: 181 PNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGITVSCQNERSQLQNRESCMKMLRARM 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-L 343
           Y+  LQ+R E   +   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ L
Sbjct: 241 YQQILQERLEKQLLERKNKKEIAWGSQIRNYVFQPYTLVKDVRTGYETGNVQAMMDGELL 300

Query: 344 DDFMKATLA 352
           DDF+KA LA
Sbjct: 301 DDFVKAYLA 309


>gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 357

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 14  FDWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            D+   ++ +      + ++  DP +  NV E + L R    L   +   +E +  +   
Sbjct: 1   MDFLKKLEEIESAFQDIESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYRKVMRSL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGA 125
               EL LE+DD  + Q   + +QR+   +    +  +   L     D  +  +E+ AGA
Sbjct: 61  EEAQEL-LEQDDEEMRQLAKEEVQRLSDMLPGLEQDLKVLLLPRDPNDHKNVIIEIRAGA 119

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMYTR+ E++ ++ E +E+++    G K    L+KG  AY  LK E 
Sbjct: 120 GGDEAALFAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFES 179

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ RI   +++ R HTS +++ V P   + ++++I   D +IDTYRASGAGGQ+VN 
Sbjct: 180 GVHRVQRIPVTEASGRIHTSTATVAVLPEA-EDVDVQIRPEDLKIDTYRASGAGGQYVNM 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKT 304
           TDSAVRITHIPTG+VV CQ ERSQ KN+A+A  +LRA+LY+ ELQK++ ++A   +    
Sbjct: 239 TDSAVRITHIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDQELQKQQAQMAAERKGQVG 298

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +IR+Y   P   + D R          VLDGDL + ++A     +
Sbjct: 299 TGDRSERIRTYNY-PQNRLTDHRIGFTLYKLDQVLDGDLYELIEALRVADQ 348


>gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|119361504|sp|Q0VS77|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 361

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 182/342 (53%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     DP +  N  + + L RE   +D  +   ++ Q  + D+     +
Sbjct: 9   LDKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVEDHGAAKAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D  + +  ++  +  +  +E      Q   L     D  + +LEV AG GG E+ 
Sbjct: 69  -QDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++A++R +K E +   +GE  G K     + G   Y  +K E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ +    +D  +I+I   D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 188 RVPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGR 310
           ITH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY+ +      E A   +S         
Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+     +++++GDLD+ + A LA
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYRLNEIVEGDLDEILGALLA 348


>gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
 gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
          Length = 360

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 179/339 (52%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +      +    D      L
Sbjct: 9   LESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNNDIEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E + Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++  E A+   +         +IR
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 309 TYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|150004050|ref|YP_001298794.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254882894|ref|ZP_05255604.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294778088|ref|ZP_06743522.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|319639698|ref|ZP_07994431.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
 gi|149932474|gb|ABR39172.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254835687|gb|EET15996.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294448146|gb|EFG16712.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|317388662|gb|EFV69508.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 141/357 (39%), Positives = 209/357 (58%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D +N + ++     +T+ P  W +  +A+  MR+ + L   I   +E++
Sbjct: 11  KERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREVK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +     DD    +E     Q+    VE  + +++L  EAD  D  L+++ 
Sbjct: 71  TMADELELAFDFCK--DDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKINC 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY RWAE   +K     + DG+EAGIK+ T+ I+G  AYG+LKG
Sbjct: 129 GAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFAYGYLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQNV 248

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E 
Sbjct: 249 NKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEE 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 309 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223526|sp|A4SK64|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 362

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 187/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L RE   L++ +   +  +    +NL   +L
Sbjct: 9   LEGLIERHEEVQAMLGEPGVASDQDRYRALTREYAQLEDIVHAFQRFRQA-EENLEATKL 67

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + L      ++ + +  Q   L     D N+ YLE+ AGAGG E+ 
Sbjct: 68  MLEEDDADLREMAQEELPLAKSTLEEQEQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ ++   +  +DGE  G K     + G + YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAERQGWRISIVSCNDGEHGGYKEVIAKVDGEHVYGRLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++ +IEI+ +D +IDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAVLPEVPEAEQIEINANDLKIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKN+A+A ++L A+L   E ++          +    G    
Sbjct: 248 ITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQSTRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + + R N+      ++++GDLD  +   +
Sbjct: 308 RIRTYNY-PQGRLSEHRINLTLYRLGEIMEGDLDCIISPMI 347


>gi|254251975|ref|ZP_04945293.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
 gi|124894584|gb|EAY68464.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
          Length = 248

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 149/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVTGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 356

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 190/342 (55%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 76  ALEEDDCSILQE---TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D+          S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P V + +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLPEV-EEVDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I E+ K+++G G + 
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMAL--QEQQREIAETRKSQVGTGERS 301

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
          Length = 371

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L        + +    D      L
Sbjct: 20  LDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 79

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +  +D +   +  ++  +   ++LL      D  +  LE+ AG GG ES 
Sbjct: 80  L---DDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESA 136

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+R+++ E +     +  G K   + I G  A+  LK E G HR+ 
Sbjct: 137 LFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQ 196

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+  E+EI+ SD R+DT+RASGAGGQHVN TDSAVR
Sbjct: 197 RVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVR 256

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQH+NK +A  +L A++ +++L  R   A    + +  IG G  
Sbjct: 257 LTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRRNLIGSGDR 314

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++DGDLD+ + A  A
Sbjct: 315 SDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSA 357


>gi|187930213|ref|YP_001900700.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
 gi|238691828|sp|B2UDM7|RF1_RALPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187727103|gb|ACD28268.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
          Length = 360

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEEDIATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
           A    D  +     D L+  +  +E  + E     L     D  + ++E+ AG GG ES 
Sbjct: 69  AA---DPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARLVGEGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G  
Sbjct: 246 ITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++DGD+D+ + A  A
Sbjct: 304 SDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGALAA 346


>gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 360

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|167581337|ref|ZP_02374211.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis TXDOH]
 gi|167619419|ref|ZP_02388050.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis Bt4]
 gi|257138616|ref|ZP_05586878.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
          Length = 248

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 149/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGDYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|71281852|ref|YP_270226.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
 gi|119361527|sp|Q47Y94|RF1_COLP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71147592|gb|AAZ28065.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
          Length = 362

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 117/338 (34%), Positives = 187/338 (55%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP    +  + + L +E + LD   S     +    D     EL
Sbjct: 9   LEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAEDDFSTA-EL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L++DD  + +   +  +  K  V    +  Q   L     D N+ ++E+ AGAGG E+ 
Sbjct: 68  MLKDDDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ +K E +  ++ E+ G K   + + G   +G +K E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV+CQ++RSQHKN+AQA ++L+A+L + E +KR         +    G    
Sbjct: 248 ITHIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   + D R N+     +++++G L   M+
Sbjct: 308 RIRTYNF-PQGRMSDHRINLTLYRLNEIMEGSLQLVME 344


>gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
 gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
          Length = 355

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P +  ++   + + RER  LD  ++          D     E+
Sbjct: 5   LEQLAHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIKTAQEM 64

Query: 76  ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E      ++++      Q   L     DS   YLE+ AG GG ES  +A
Sbjct: 65  MADPDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE   ++ E +   D E  G K     + G   YG LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATETQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  ++E+        K+ +G G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDKALQVLAARLKDKQ--QQEQHDKEAAQRKSLVGTGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGDL++   A LA
Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLGHIMDGDLNELTNALLA 342


>gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
 gi|189039991|sp|B0TR27|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
          Length = 361

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 185/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDASIIADQERFRALSKEYSQLEDVVRTFKSYQQAEEDFESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +EEDD  + +   +  +  K  +       Q   L     D N+ ++E+ AGAGG E+ 
Sbjct: 69  -MEEDDPELKEMAQEEYKATKEAIATLEAELQILLLPKDPNDDNNCFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++  IEI+++D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         +    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRNLVSSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V + R N+     ++ ++GD+D  ++  +
Sbjct: 308 RIRTYNY-PQGRVSEHRINLTLYRLNEFMEGDIDCVVEPLI 347


>gi|291515566|emb|CBK64776.1| bacterial peptide chain release factor 2 (bRF-2) [Alistipes shahii
           WAL 8301]
          Length = 370

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 134/359 (37%), Positives = 211/359 (58%), Gaps = 11/359 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ ++   L    D D     L     KT++P+ W N  +A+  +R+   +   +     
Sbjct: 9   EIEQRREALERCLDIDQKRIDLRNEEEKTQEPNFWDNPDKAREQLRKVAGIKAWVEDYDA 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D  ++ +   E       +E   +      ++E  +  ++L  + D   A L++
Sbjct: 69  IRKDAEDLQLMPDFVKEGVVSE--EEMDAHYAATLEKIEKLEMRNMLRRDEDKLGAILDI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA+ML+RMYTRW E   +K + L+   G+E G+KS TL  +G  AYG+L
Sbjct: 127 NAGAGGTEALDWASMLMRMYTRWGEAHGYKVKVLDFQAGDEVGVKSCTLEFEGEYAYGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+VR+SP+++N++R T+F+S++V P VDD+IEI ++ +D   DT+R+SGAGGQ
Sbjct: 187 KSENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEITVNAADIEWDTFRSSGAGGQ 246

Query: 242 HVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++AVR+ +      TG     +++  + RSQ  N+  A  +LR+KLY+ EL KR 
Sbjct: 247 NVNKVETAVRLRYHAKDPDTGEAIEYLIENMETRSQLMNRENAMRILRSKLYQRELDKRM 306

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+SK +I WG QIRSYV    + VKD RT ++ ++   V+DGDLD F+KA L 
Sbjct: 307 ATQQALEASKKKIEWGSQIRSYVFDD-RRVKDHRTGVQTSAVESVMDGDLDAFIKAYLM 364


>gi|85711946|ref|ZP_01043000.1| Protein chain release factor A [Idiomarina baltica OS145]
 gi|85694132|gb|EAQ32076.1| Protein chain release factor A [Idiomarina baltica OS145]
          Length = 362

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 112/328 (34%), Positives = 178/328 (54%), Gaps = 7/328 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +     + + L +E   L+  +S     +    D     E+
Sbjct: 9   LEGLIERYEEVQALLGEPDIISEQDKFRSLSKEYAQLEEVVSAFNSYRQAQSDLTAAHEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A ++DD  + +  ++ +   K  VE  +       L     D    YLE+ AGAGG E+ 
Sbjct: 69  A-DDDDPEMREMANEEIADAKQRVESLENSLQVLLLPKDPNDDRACYLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE+  ++   +  ++GE  G K     + G   YG +K E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEQHGWRVSTVSANEGEHGGYKEVIAQLSGDGVYGRMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++  IEI+ +D R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEIPEAEAIEINPADLRVDTFRASGAGGQHVNRTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+P+GVVV+CQ+ERSQHKN+A+A ++L+++L  +E +KR +E A+   S         
Sbjct: 248 ITHLPSGVVVECQEERSQHKNRAKAMSVLQSRLQRMEDEKRAQEEASTRRSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +IR+Y   P   V D R N+      +V
Sbjct: 308 RIRTYNY-PQSRVTDHRINLTLYRLDEV 334


>gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
 gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
          Length = 330

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 151/316 (47%), Positives = 209/316 (66%), Gaps = 3/316 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +  + K ++ +   L   I   ++++  + +     +L LEE D    +     L+ +
Sbjct: 8   WDDAEKVKPILTKYNKLQKEIENWEKLKADIKELSEWKDL-LEEGDEYKEE-FEKKLKEV 65

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  ++  + E +L    D  +A L +HAG GGT++QDW  +LLRMY RWAE++ ++ + L
Sbjct: 66  ENSLKEFEIEMILQDPHDEANAILSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKIL 125

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +I  GEEAGIKSATLLI+G  AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P +
Sbjct: 126 DISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPEL 185

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            +S  IEI   D +I+T+RA GAGGQHVN  +SAVRITHIPTG+VVQCQ ERSQH NK  
Sbjct: 186 PEST-IEIRPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEM 244

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +L+A+L ELE +KR E     +    EI WG QIRSYV  PY +VKD RT +E  + 
Sbjct: 245 ALRVLKARLEELEEKKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNV 304

Query: 336 SDVLDGDLDDFMKATL 351
             V+DG++D F++A L
Sbjct: 305 QAVIDGEIDPFIEAYL 320


>gi|167563347|ref|ZP_02356263.1| peptide chain release factor 2 [Burkholderia oklahomensis EO147]
 gi|167570518|ref|ZP_02363392.1| peptide chain release factor 2 [Burkholderia oklahomensis C6786]
          Length = 248

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 149/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 IGASLK 245


>gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298485681|ref|ZP_07003760.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|119361578|sp|Q48MV4|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 360

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  +++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYQQLIRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|268592708|ref|ZP_06126929.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
 gi|291311851|gb|EFE52304.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
          Length = 360

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 181/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +        +  + D++   E+
Sbjct: 9   LEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLSDVAKCFSAWRT-VQDDIETAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  + ++E+ AGAGG E+ 
Sbjct: 68  LL--DDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P + ++   EIS +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR+   A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQAAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIQPII 345


>gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
 gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
          Length = 360

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 181/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN   R   L     D  +     + +   +E   ++  I+  +E++    D      L
Sbjct: 9   LDNLSDRFEELTALLGDAEVISKQSQFRAYSKEYAEIEPVIATFRELRKVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +     + + K  +    +  Q   L     D  + YLE+ AG GG E+ 
Sbjct: 69  LKDS-DPDLREMAELEVDQAKEALVGLEDKLQRMLLPKDPNDGRNVYLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AEK+ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG VV+CQ+ERSQHKN+A+A   L AKL + +         I E+ K  +G G  
Sbjct: 248 ITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQ--DAAAHKEISETRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S ++V+ G ++  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLNEVIAGGVEAVIEPLLA 348


>gi|16080754|ref|NP_391582.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311662|ref|ZP_03593509.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315990|ref|ZP_03597795.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320901|ref|ZP_03602195.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325185|ref|ZP_03606479.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313251|ref|YP_004205538.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
 gi|1172909|sp|P45872|RF1_BACSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|853776|emb|CAA89884.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2636226|emb|CAB15718.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291486285|dbj|BAI87360.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019525|gb|ADV94511.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
          Length = 356

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D
Sbjct: 1   MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    LQ+    + E  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQQEAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|187935755|ref|YP_001884696.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
 gi|238691625|sp|B2TJY5|RF1_CLOBB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187723908|gb|ACD25129.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
          Length = 360

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 194/344 (56%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +
Sbjct: 9   IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68

Query: 79  EDDCSILQETSDNLQRI-KLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  ++ +  + + EVE     Q   L     D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMKEMLNEEIASLSQREVELEKEIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS  ++ V P V D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTVTVAVLPEV-DDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV CQ E+SQ KNK +A  +LR++L+  E  ++E    I    K+++G G    +
Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLF--EKAEQERADGIAADRKSQVGTGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +        LDGD+ + + A +   +
Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGDVQEMINALITADQ 348


>gi|296331340|ref|ZP_06873812.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676326|ref|YP_003867998.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151455|gb|EFG92332.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414570|gb|ADM39689.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 356

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D
Sbjct: 1   MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    LQ+    + E  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQQEAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|212636630|ref|YP_002313155.1| peptide chain release factor 1 [Shewanella piezotolerans WP3]
 gi|226739120|sp|B8CQV2|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3]
          Length = 361

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 186/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDAGIIADQERFRALSKEYSQLEDVVKAFKSFQQAEEDLESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            +EEDD  + +   +  +  K  +E  + E     L     D N+ ++E+ AGAGG E+ 
Sbjct: 69  -MEEDDAELKEMAQEEYKAAKETIETLESELQILLLPKDPNDDNNCFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE  +++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR    +    +    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEDSTRRNLVSSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V + R N+      + ++GD+D  ++  +
Sbjct: 308 RIRTYNF-PQGRVSEHRINLTLYRLGEFMEGDIDVVIEPLI 347


>gi|154687816|ref|YP_001422977.1| peptide chain release factor 1 [Bacillus amyloliquefaciens FZB42]
 gi|154353667|gb|ABS75746.1| PrfA [Bacillus amyloliquefaciens FZB42]
          Length = 359

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 186/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   +  QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +
Sbjct: 1   MKTVLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    LQ     + E  +   +     D  +  +E+   
Sbjct: 61  LADAKAMLEEKLDADMREMVKEEISELQGETETLSERLKVLLIPKDPNDDKNVIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E
Sbjct: 121 AGGEEAALFAGNLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQQEAQAEYDQTRKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 AVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 350


>gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
           27405]
 gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|166223552|sp|A3DIL4|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125715301|gb|ABN53793.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium
           thermocellum ATCC 27405]
 gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
          Length = 360

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 122/322 (37%), Positives = 178/322 (55%), Gaps = 7/322 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
            A  R   +N +  DP +  N  E K LM+E   L+  ++   E +    +     E+  
Sbjct: 7   AAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIADAKEMLN 66

Query: 78  EEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D    +     L+  + ++E   K+ + LL      D  +  +E+  GAGG E+  +
Sbjct: 67  EKLDKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDERNVIVEIRGGAGGDEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+AE+  +KTE L+ +  E  G K     I+G  AY  LK E GVHR+ R+
Sbjct: 127 AGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++N R HTS  ++ V P   + I++EI+ +D RIDTYRASGAGGQH+N TDSA+RIT
Sbjct: 187 PVTEANGRVHTSTVTVAVLPEA-EEIDVEINPNDLRIDTYRASGAGGQHINKTDSAIRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQI 312
           H+PTG+VV CQ +RSQHKNK +A  +LR+KLYE+  +++  EIA   +S         +I
Sbjct: 246 HLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQHNEIAQERKSQVGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTS 334
           R+Y   P   V D R  +    
Sbjct: 306 RTYNF-PQGRVTDHRIGLTLYK 326


>gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 360

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|288803779|ref|ZP_06409207.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302345945|ref|YP_003814298.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
 gi|288333766|gb|EFC72213.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302150148|gb|ADK96410.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
          Length = 371

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 122/359 (33%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D           +T+ P  W +   A+  M++ + ++  +    + 
Sbjct: 10  IQERTEALHRYLDIDKKRIEFEEEQLRTQAPDFWDDPARAQEQMKKVKDIEKWVKDYDKA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E      ++   +E  + +++L  E D  +  ++++
Sbjct: 70  RALADEVQLAFDFYKDE--LVTEEEVDTAYAKVLKVIEGLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E + ++    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAQGYRVTISDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 360

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|291538249|emb|CBL11360.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis XB6B4]
          Length = 358

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 197/349 (56%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ + R   L ++  +P +  + +  + LM+E+  L   ++  KE +     + D
Sbjct: 1   MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L LLE   +E+   +  +E +D+  R++   +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +KTE +E  +    G+KS T ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++++I + D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVQIDDKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KLY+LE QK  +  A + +S     
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAEAELRKSQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +++GD+ + + A +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|78484734|ref|YP_390659.1| peptide chain release factor 1 [Thiomicrospira crunogena XCL-2]
 gi|119361633|sp|Q31IN8|RF1_THICR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78363020|gb|ABB40985.1| bacterial peptide chain release factor 1 (bRF-1) [Thiomicrospira
           crunogena XCL-2]
          Length = 363

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 176/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+RL  +N    DP +  N  + + L +E   L   +    +      D     ++
Sbjct: 9   LENLVERLDEVNHLISDPEIINNQNKFRNLTKEHSQLTPVVETFNQFIQNQGDLQEAKDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   + L  ++ +    + E     L     D  + +LE+ AG GG E+ 
Sbjct: 69  IK-SGDPDLKEMGQEELPELEKQQATLEAELQKMLLPKDPNDDANIFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +   +GE  G K     I G  AY  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAETMRWQVEVINSQEGEHGGYKEIIARIIGDGAYSRLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ + P   D  +I+++ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATETQGRVHTSAATVVIMPEAQDVEQIDLNPADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGR 310
           ITHIPTG VV+CQ ERSQHKN+A+A ++L +++  E +    +EIA   +S         
Sbjct: 248 ITHIPTGTVVECQDERSQHKNRARAMSLLASRIMDERQRIHDQEIAQERKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +++ G L   +   +
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLDEIMQGGLQQVVDPLI 347


>gi|240147055|ref|ZP_04745656.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|257200778|gb|EEU99062.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|291535754|emb|CBL08866.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis M50/1]
          Length = 357

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 197/349 (56%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ + R   L ++  +P +  + +  + LM+E+  L   ++  KE +     + D
Sbjct: 1   MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L LLE   +E+   +  +E +D+  R++   +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +KTE +E  +    G+KS T ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++++I + D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVQIDDKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KLY+LE QK  +  A + +S     
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAEAELRKSQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +++GD+ + + A +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
 gi|189039993|sp|A8FYZ0|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
          Length = 361

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 186/340 (54%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPGVISDQERFRALSKEYSQLEDVVTSFKSFQQATEDLEAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A + DD  + +   + ++  K  +E  +       L     D N+ ++E+ AGAGG E+ 
Sbjct: 69  ASD-DDPELKEMAQEEMKEAKSLLEKLEDELQILLLPKDPNDDNNCFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E ++++ E +  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYVESKRWQLEVMNTNEGEHGGFKEVIAKVSGEGVYGQLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S  IEI++ D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVVVLPEIPESEAIEINKGDLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         +    G    
Sbjct: 248 LTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSAEESTRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V + R N+     ++V++G+LD  ++  
Sbjct: 308 RIRTYNF-PQGRVSEHRINLTLYRLNEVMEGELDAILEPL 346


>gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073]
 gi|119361560|sp|Q2RFW0|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella
           thermoacetica ATCC 39073]
          Length = 356

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 173/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     DP +  +  + +   R    L++ ++  +  +    +      +
Sbjct: 5   LEQIEARYEELGRLMGDPEVIADPEQLQKHARAHAALEDIVTTFRRYRQVSNELAEDKAM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D    +     ++R+  E E  + E     L     D  D  +E+ AGAGG E+ 
Sbjct: 65  LEEEKDREFQELLKAEIERLTGEQERLEQELKILLLPKDPNDEKDIIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AEK++++TE +  H  E  G K     ++G   Y  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQVEGQGVYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++EI   D R+D + +SG GGQ VNTT SAVR
Sbjct: 185 RIPTTESGGRIHTSTATVAVLPEA-EEVDVEIKPEDLRVDIFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV CQ E+SQ KNK +A  +LRA+L ++   +RE E+A    S         
Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAEREGELAEERRSQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VL G+LD+ + A +   +
Sbjct: 304 RIRTYNF-PQNRVTDHRIGLTLHHLDQVLAGELDEIIDALVTTDQ 347


>gi|304410657|ref|ZP_07392275.1| peptide chain release factor 1 [Shewanella baltica OS183]
 gi|304351141|gb|EFM15541.1| peptide chain release factor 1 [Shewanella baltica OS183]
          Length = 363

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 186/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K ++E+ +       L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  LE +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEETTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 360

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 178/344 (51%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++  K++     D      L
Sbjct: 9   LDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVATYKQLLKVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   +       L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVREAKDQLVELESSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A   L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y       V D R N+   S  ++L G +D  ++  LA
Sbjct: 306 SERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLA 348


>gi|134296298|ref|YP_001120033.1| peptide chain release factor 2 [Burkholderia vietnamiensis G4]
 gi|134139455|gb|ABO55198.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           vietnamiensis G4]
          Length = 248

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254790905|sp|B8GLA1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 361

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     +P +  +    + L  E   L+  +   +  +    D     E+
Sbjct: 9   LEGVSERFQELAGLLSEPEVISDNARFRRLSMEYSQLEPVVEAFRRYEGAQADLTAAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     D        +E  + E     +     D ++ +LE+ AG GG E+ 
Sbjct: 69  QKD-PDPDLRAMAEDEAATAAERLETLELELQKLLIPKDPHDHSNLFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + ++ E L   +GE  G K     + G  AY  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAENQGWQVEILSQSEGEHGGYKEVIARLIGAGAYSRLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P  D+    EI+ +D R+DTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSAATVAVMPEPDEVEAPEINPADLRVDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV+CQ ERSQHKN+A+A ++L AKL+E E  +++   +    S    G    
Sbjct: 248 LTHLPTGIVVECQDERSQHKNRARAMSLLAAKLFEAEQARQQAEQSATRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R N+       V+ GDLD  ++  +
Sbjct: 308 RIRTYNF-PQGRITDHRINLTLYKLDAVMAGDLDPVIEPLI 347


>gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|75503325|sp|Q4ZXW7|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63254909|gb|AAY36005.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 360

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|76810558|ref|YP_334108.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121600418|ref|YP_993518.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|124383704|ref|YP_001029053.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10229]
 gi|126449475|ref|YP_001081026.1| peptide chain release factor 2, programmed [Burkholderia mallei
           NCTC 10247]
 gi|134278044|ref|ZP_01764759.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|167720343|ref|ZP_02403579.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei DM98]
 gi|167739335|ref|ZP_02412109.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 14]
 gi|167816549|ref|ZP_02448229.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 91]
 gi|167824945|ref|ZP_02456416.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 9]
 gi|167846462|ref|ZP_02471970.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei B7210]
 gi|167895040|ref|ZP_02482442.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 7894]
 gi|167903426|ref|ZP_02490631.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911676|ref|ZP_02498767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 112]
 gi|167919676|ref|ZP_02506767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei BCC215]
 gi|254177740|ref|ZP_04884395.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|254195760|ref|ZP_04902186.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
 gi|254357976|ref|ZP_04974249.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|76580011|gb|ABA49486.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121229228|gb|ABM51746.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|134251694|gb|EBA51773.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|148027103|gb|EDK85124.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|160698779|gb|EDP88749.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|169652505|gb|EDS85198.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
          Length = 248

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 149/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
 gi|254790883|sp|B8F526|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
          Length = 360

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 181/339 (53%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  +     +E   L+  +S     +    D      L
Sbjct: 9   LDSLSERHEELQALLGDATIISDQEKFCAYSKEYSQLEEVVSTFNRWKKLHSDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   I  E  +  +    ++E   Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +E A+   +         +IR
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGSGDRSDKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 309 TYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155]
 gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223]
 gi|166223601|sp|A3D0G1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790896|sp|B8E815|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           baltica OS155]
 gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223]
          Length = 363

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 186/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K ++E+ +       L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  LE +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|145639103|ref|ZP_01794711.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|145272075|gb|EDK11984.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|309751054|gb|ADO81038.1| Peptide chain release factor 1 [Haemophilus influenzae R2866]
          Length = 361

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 184/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   +L+ G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++         +    G 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 304 RSDKIRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQPIIT 347


>gi|328555408|gb|AEB25900.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208]
 gi|328913779|gb|AEB65375.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3]
          Length = 356

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +  QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D
Sbjct: 1   MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    LQR    + E  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQQEAQAEYDQNRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|308175429|ref|YP_003922134.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
 gi|307608293|emb|CBI44664.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
          Length = 356

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +  QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D
Sbjct: 1   MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLTD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    LQR    + E  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQQEAQAEYDQNRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
 gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
          Length = 360

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 177/344 (51%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++   +      D      L
Sbjct: 9   LDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPVVTTYGQWLKTHADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++       Q   L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVREAKDKLIALEGDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y       V D R N+   S  ++L G +D  ++  LA
Sbjct: 306 SERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLA 348


>gi|212213085|ref|YP_002304021.1| peptide chain release factor 2 [Coxiella burnetii CbuG_Q212]
 gi|212011495|gb|ACJ18876.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuG_Q212]
          Length = 289

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 160/281 (56%), Positives = 212/281 (75%), Gaps = 1/281 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E D  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKDTDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E+SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYVL     VKDLRT +E ++   VLDGD+D F++A L 
Sbjct: 241 IRSYVL-DASRVKDLRTGVETSNTQAVLDGDIDLFIEACLK 280


>gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
 gi|119361580|sp|Q4K695|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
          Length = 360

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 182/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++  K++     D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQAKFRAYSKEYAEVEPIVATYKQVLKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             + +D  + +  ++ ++  K ++   +       L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKD-NDPDLREMAAEEVREAKEQLAELESSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D RIDTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  ++L G ++  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLDEILAGGVEAVIEPLLA 348


>gi|167586751|ref|ZP_02379139.1| peptide chain release factor 2 [Burkholderia ubonensis Bu]
          Length = 248

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATVKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
 gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
          Length = 304

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 139/299 (46%), Positives = 205/299 (68%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ +++ Q  L D   L+EL   E+D  +LQE + NL+++  +++  + + LLSG  D  
Sbjct: 1   MTQLQDWQGTLDDAEALVELLQLEEDAGLLQEAAGNLRQLNQQLDQWELQQLLSGPYDKV 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A L ++ GAGGT++QDWA MLLRMYTRW+E++ +K    E+ +G+EAGIKSATL ++G 
Sbjct: 61  GAVLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATLEVEGR 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E+G HRLVRISP+++N +R TSF+ I V P +D  +E++I ++D  I T R+
Sbjct: 121 YAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHEVELDIPDTDLEITTSRS 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  +++ + 
Sbjct: 181 GGKGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                    E  WG QIR+YV  PYQMVKDLRTN E T+   V+DG LD+F++A L  +
Sbjct: 241 IADIRGDAVEAAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEAYLRQE 299


>gi|24375323|ref|NP_719366.1| peptide chain release factor 1 [Shewanella oneidensis MR-1]
 gi|32171552|sp|Q8EAR3|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24350136|gb|AAN56810.1|AE015816_7 peptide chain release factor 1 [Shewanella oneidensis MR-1]
          Length = 363

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 117/340 (34%), Positives = 187/340 (55%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K+E+E  + E     L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++R+Y   P   V + R N+     ++V++GDLD  +   
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPL 346


>gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 360

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  + ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|319650894|ref|ZP_08005031.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
 gi|317397492|gb|EFV78193.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
          Length = 357

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   +   R   LN    DP +  +  + +   +E+  +   +   +E ++   +  D
Sbjct: 1   MFDRLQSVEDRYERLNELLSDPEIVNDPKKLREYSKEQSGIQETVDTYREYKEVKEQYQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    L+  K ++E   +   +     D  +  +E+   AGG
Sbjct: 61  ARAMLEEKLDAEMREMVKEELAELEERKEDLEARLKILLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAETQGWKIDVIEASSTGVGGYKEIIFMINGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   +  K+ +G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQQEAQAEYDQQRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIVEEQ 347


>gi|224536533|ref|ZP_03677072.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521789|gb|EEF90894.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 371

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 210/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   I+   EI
Sbjct: 10  IKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKTAEAQMKKVKGLQQWIAGYNEI 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  +   +  + ++  + +++L  EAD  D  L+++
Sbjct: 70  KTLSDELQLAFDFYKDE--LVTEEEIDEAYAKASVAIDELELKNMLRDEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|212692934|ref|ZP_03301062.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|237708323|ref|ZP_04538804.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|237723533|ref|ZP_04554014.1| peptide chain release factor RF-2 [Bacteroides sp. D4]
 gi|265757045|ref|ZP_06090907.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
 gi|212664519|gb|EEB25091.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|229438084|gb|EEO48161.1| peptide chain release factor RF-2 [Bacteroides dorei 5_1_36/D4]
 gi|229457544|gb|EEO63265.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|263233544|gb|EEZ19173.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 140/357 (39%), Positives = 209/357 (58%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D +N + ++     +T+ P  W +  +A+  MR+ + L   I   +E++
Sbjct: 11  KERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREVK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +     DD    +E     Q+    VE  + +++L  EAD  D  L+++ 
Sbjct: 71  TMADELELAFDFCK--DDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKINC 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY RWAE   +K     + DG+EAGIK+ T+ I+G  +YG+LKG
Sbjct: 129 GAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFSYGYLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQNV 248

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E 
Sbjct: 249 NKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEE 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 309 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
 gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
          Length = 386

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   L     DP +  +      L +E   + + ++  K+ +  L D     E+
Sbjct: 35  LDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESEEV 94

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  +     ++L+ ++ +    +       L     D  +  +E+   AGG E+ 
Sbjct: 95  LRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAGGDEAS 154

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY  +AE++ +K E ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 155 LFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENGAHRVQ 214

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D ++++I   D R D YR+SGAGGQHVN T SAVR
Sbjct: 215 RVPVTESAGRVHTSTATVGVMPE-YDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTSSAVR 273

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y+  E + +E+     +++        
Sbjct: 274 MTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTGDRSE 333

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 334 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 377


>gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3]
 gi|166223605|sp|A0KT88|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           ANA-3]
          Length = 363

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 117/340 (34%), Positives = 186/340 (54%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQAQADLESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K E+E  + E     L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++R+Y   P   V + R N+     ++V++GDLD  +   
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPL 346


>gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
 gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
          Length = 285

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 141/277 (50%), Positives = 193/277 (69%), Gaps = 1/277 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A ++    IL   ++ +  ++ E+   +  +   G  D+ DA LE+H GAGGTE+QDWA
Sbjct: 1   MAKDDGSPEILDALAEQIDTLRSELADAELAAFF-GPEDNADAILEIHPGAGGTEAQDWA 59

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RWAE+++F  + L+   G+EAG+KS TL I GP AYG L  E+G+HRL+RIS
Sbjct: 60  EMLLRMYRRWAERKRFDVKMLDFLPGDEAGVKSVTLQISGPYAYGLLAVEKGIHRLIRIS 119

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS+ RRHTSF+S+ VYP     I+IE+ E D R+D +RASG GGQHVN T SA+RITH
Sbjct: 120 PFDSSGRRHTSFASVDVYPDAGVDIDIEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITH 179

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT +VVQCQ E+SQH+N+  A  +L+A+LY+LEL+K E        SK  IG+G QIR+
Sbjct: 180 LPTNIVVQCQNEKSQHRNRETAMKVLKARLYDLELKKLEAEKQESYESKNAIGFGSQIRT 239

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y +QPY++VKD RT ++      VLDGDLD F++  L
Sbjct: 240 YTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGFL 276


>gi|254247791|ref|ZP_04941112.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
 gi|124872567|gb|EAY64283.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
          Length = 248

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 149/246 (60%), Positives = 197/246 (80%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 VEMRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
 gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
          Length = 330

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 152/316 (48%), Positives = 209/316 (66%), Gaps = 3/316 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W N  + K ++ +   L   I   ++++  + +     +L LEE D    +     L+ +
Sbjct: 8   WDNSEKVKPILTKFNKLQKEIESWEKLKTDIEELSEWKDL-LEEGDEYKEE-FEKKLKEV 65

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  ++  + E +L    D  +A L +HAG GGT++QDW  +LLRMY RWAE++ ++ + L
Sbjct: 66  EKSLKNFEIEMVLQDPHDEANAVLSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKIL 125

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +I  GEEAGIKSATLLI+G  AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P +
Sbjct: 126 DISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPEL 185

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            +S  IEI   D +I+T+RA GAGGQHVN  +SAVRITHIPTG+VVQCQ ERSQH NK  
Sbjct: 186 PEST-IEIKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEM 244

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +L+A+L ELE +KR E     +    EI WG QIRSYV  PY +VKD RT +E  + 
Sbjct: 245 ALRVLKARLEELEERKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNV 304

Query: 336 SDVLDGDLDDFMKATL 351
             V+DG++D F++A L
Sbjct: 305 QAVIDGEIDPFIEAYL 320


>gi|260063027|ref|YP_003196107.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
 gi|88784596|gb|EAR15766.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
          Length = 313

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 146/308 (47%), Positives = 210/308 (68%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   +   +  +  L D  +++E           +E + +L+R    +E  +F 
Sbjct: 1   MKRLDTLKGWVEEFETAESLLSDLEVMVEFHE--AGEVAEEEVARHLKRATDAIEKLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA+ML+RMY  W+EK  +K   L   +G+ AGI
Sbjct: 59  NMLSDEGDDLTAVLQITAGAGGTESCDWASMLMRMYMMWSEKNGYKVRELNYQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+GP A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ 
Sbjct: 119 KTVTLEIEGPFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++ H PTG+ + C   RSQH N+A A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQISCSDSRSQHDNRATALKMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++E     ESSK +I WG QIR+YV+ PY++VKD+RT  E  +   V+DG+++D
Sbjct: 239 EIELRKKQEAREAIESSKMKIEWGSQIRNYVMHPYKLVKDVRTGEETGNVDAVMDGEIND 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAFLMM 306


>gi|332520510|ref|ZP_08396972.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
 gi|332043863|gb|EGI80058.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
          Length = 317

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 141/307 (45%), Positives = 210/307 (68%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +     +         + D  ++ E   E  + + L + ++   + +  +E  +F+
Sbjct: 1   MKTLRVKKKWVEDYNTANTLIEDLDVIYEFYKE--NEATLNDVTNRFTKAQTAIEDLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E DS  A L++ AGAGGTES DWA ML+RMY  +AEK  FK + L + +G+ AGI
Sbjct: 59  NMLSEEGDSLSAVLQITAGAGGTESCDWAQMLMRMYLMYAEKNNFKVKELNLQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ 
Sbjct: 119 KTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++TH P+G+ + C + RSQH N+++A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRSRALQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQK+       E++K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DGD+  
Sbjct: 239 EIELQKQLSQREDIEAAKMKIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDAVMDGDITP 298

Query: 346 FMKATLA 352
           F+K+ L 
Sbjct: 299 FLKSYLM 305


>gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301]
 gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC
           6301]
          Length = 304

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 141/294 (47%), Positives = 199/294 (67%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + Q    D   +LEL   E D ++ +E   N+QR++ E++  + + LLSG  D+  A L 
Sbjct: 2   DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILS 61

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGT++QDWA MLLRMYTRWAE + +K    E+ +GEEAGIKS TL I+G  AYG+
Sbjct: 62  INAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGY 121

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+G HRLVRISP+++N +R TSF+ + V PV+D  I++EI E D  I T RA G GG
Sbjct: 122 LKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGG 181

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRI H+PTG+ V+C +ERSQ +NK +A  +LRAKL  +  +++ +      
Sbjct: 182 QNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILRAKLLVVLQEQKAKEVAEIR 241

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               E  WG QIR+YV  PYQ+VKDLRT +E  + +DV++GDL+ F++A L   
Sbjct: 242 GDMVEAAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295


>gi|332980841|ref|YP_004462282.1| peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1
           BON]
 gi|332698519|gb|AEE95460.1| bacterial peptide chain release factor 1 (bRF-1) [Mahella
           australiensis 50-1 BON]
          Length = 356

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D+  +R   L+ K  DP +       + L++E   L+  ++  +E ++ +     
Sbjct: 1   MLDKLDSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
           +L +  E  D  + +     L  +K   +  + E           D  +  +E+ AGAGG
Sbjct: 61  VLAMIKETGDAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+ +AE R +K E ++ +  +  GIK     ++G  AY  LK E GV
Sbjct: 121 EEAALFAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   + +E+EI+ +D RID YR++G GGQ VNTTD
Sbjct: 181 HRVQRVPVTEAGGRIHTSTATVAVLPEA-EEVEVEINPNDLRIDVYRSTGHGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQ KNK +A  +L+++L  L + + E+ A + ++ ++++G
Sbjct: 240 SAVRITHIPTGMVVTCQDEKSQLKNKDKAMRVLKSRL--LAIAQAEQDAQLAQTRRSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        L+GD+D+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALITADQ 347


>gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           642]
          Length = 360

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|33152002|ref|NP_873355.1| peptide chain release factor 1 [Haemophilus ducreyi 35000HP]
 gi|46576749|sp|Q7VMV9|RF1_HAEDU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33148224|gb|AAP95744.1| peptide chain release factor 1 (RF-1) [Haemophilus ducreyi 35000HP]
          Length = 360

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 187/342 (54%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L     D  +  +  + +   +E   L+  ++     +    D     EL
Sbjct: 9   LDCLSERHEELQALLGDASVIADQDKFRAYSKEYAQLEEVVATFNRWKKLNSDIEEA-EL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +  ++ + + K E+E    + Q   L     D  +A+LE+ AG GG E+ 
Sbjct: 68  LL--DDPDMKEMATEEITQNKAEIECLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAG 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE ++++ E +  ++ E+ G K   + I G + YG LK E G HR+ 
Sbjct: 126 IFAGDLYRMYSRYAESKRWRIEEMSANESEQGGYKEIIVKISGESVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++    A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAMAQADTRRNLLGTGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 306 KIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 346


>gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942]
 gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus
           elongatus PCC 7942]
          Length = 304

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 140/294 (47%), Positives = 199/294 (67%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + Q    D   +LEL   E D ++ +E   N+QR++ E++  + + LLSG  D+  A L 
Sbjct: 2   DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILS 61

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGT++QDWA MLLRMYTRWAE + +K    E+ +GEEAGIKS TL I+G  AYG+
Sbjct: 62  INAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGY 121

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+G HRLVRISP+++N +R TSF+ + V PV+D  I++EI E D  I T RA G GG
Sbjct: 122 LKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGG 181

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRI H+PTG+ V+C +ERSQ +NK +A  +L+AKL  +  +++ +      
Sbjct: 182 QNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILKAKLLVVLQEQKAKEVAEIR 241

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               E  WG QIR+YV  PYQ+VKDLRT +E  + +DV++GDL+ F++A L   
Sbjct: 242 GDMVEAAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295


>gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|32171519|sp|Q888C1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 360

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 176/342 (51%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPKTESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +                  G    
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 308 RIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1]
 gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 359

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 125/341 (36%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  LN+         ++   + + RE   L   ++   E      D     EL
Sbjct: 9   LDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRTAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  QE  D  +     +E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +   + E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNKAQA  +L A++ +++L  R++ +    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQL--RQQQSEEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+   A + 
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLDELTNALIT 346


>gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
 gi|259585239|sp|C4Z1S4|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
          Length = 357

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 182/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  +  +P +  +  + K LM+E+  L   I    E ++   +   
Sbjct: 1   MFDRLEDTVNRYEDITAELGNPDVVNDQEKFKKLMKEQSSLAPLIETYTEYKNCKKNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  VE  + E     L     D  D  +E+ AGAGG
Sbjct: 61  SLAILDEETDEELKEMAKEELNESKARVEELEHELKILLLPKDPNDDKDIVVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +A+ R +K E L   +    G+K    ++KG  AY  +K E GV
Sbjct: 121 EEAALFAAELFRMYVHYAQARGWKVEVLSGDETGIGGMKEVEFMVKGQGAYSIMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +SN R  TS +S+ V P   + ++I I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPVTESNGRIQTSTASVAVMPEA-EEVDIHIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK  +  A+   S     
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDIETQKAHDAEADARRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       ++DGD+ D + A +A  +
Sbjct: 300 DRAEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQDIIDACIAADQ 347


>gi|251778025|ref|ZP_04820945.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243082340|gb|EES48230.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 360

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 194/344 (56%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +
Sbjct: 9   IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68

Query: 79  EDDCSILQETSDNLQRI-KLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  ++ +  + + E+E     Q   L     D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMKEMLNEEISSLSEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS  ++ V P V D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTVTVAVLPEV-DDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV CQ E+SQ KNK +A  +LR++L+  E  ++E    I    K+++G G    +
Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLF--EKAEQERADGIAADRKSQVGTGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +        LDG++ + + A +   +
Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQ 348


>gi|189464495|ref|ZP_03013280.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
 gi|189438285|gb|EDV07270.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
          Length = 371

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 132/357 (36%), Positives = 208/357 (58%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D +    ++     +T+ P  W +   A+  M++ + L   I+   EI+
Sbjct: 11  KERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWIAGYNEIK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +   +E      +E  +   +    ++  + +++L  EAD  D  L++++
Sbjct: 71  TLSEELQLAFDFYKDE--LVTEEEIDEAYAKASTAIDELELKNMLRDEADQMDCVLKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LKG
Sbjct: 129 GAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNV 248

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R   
Sbjct: 249 NKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAE 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 309 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|154482489|ref|ZP_02024937.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
 gi|149736690|gb|EDM52576.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
          Length = 356

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D  ++R   +  +  DP++  +    + LM+E+  L   +   K  ++       
Sbjct: 1   MFDKLDGILERYDEIMEQLNDPNVVSDQNNFRKLMKEQSDLAPIVEAYKAYKEAKQTVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + +   K ++    E  +   L   E D  +  +E+  GAGG
Sbjct: 61  SLMILDEESDEEMRELAKEEMNEAKEQITELEEKLKILLLPKDENDDKNVVVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +AE + +KTE + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYCMYAETQHWKTEMISVNENGLGGFKEVVFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS +++ + P   + +++EI  +DCR D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPVTESGGRIHTSTATVAIMPEA-EEVDVEIDMNDCRFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LRA+LYELE QK+++  +    S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRARLYELECQKKQDAESEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R         ++L+G L++ +   +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKFTSHRLDEILNGHLEEIIDNCIAADQ 347


>gi|71065612|ref|YP_264339.1| peptide chain release factor 1 [Psychrobacter arcticus 273-4]
 gi|119361583|sp|Q4FSV3|RF1_PSYA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71038597|gb|AAZ18905.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           arcticus 273-4]
          Length = 362

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 183/345 (53%), Gaps = 6/345 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDN 69
               D  V R   +     DP +  +  + + L  E   L +  +  +     +    D 
Sbjct: 6   RLRLDQMVDRYEEVTALLSDPSVINDNNKFRELSVEHSDLMDITTLWQNYVGAETDQADA 65

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGT 128
             +L+ A + D   ++QE  D+ +   +E+E       L     D   A+LE+ AG GG 
Sbjct: 66  EAMLKEASDPDMKEMMQEEIDSARDTIVEMEEALNVMMLPKDPNDKVPAFLEIRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  L RMY ++A+ + +  E L  ++GE  G K     + G + YG LK E GVH
Sbjct: 126 EAAIFSGDLFRMYQKYAQAQGWTLEVLSANEGEHGGYKEIITRVSGNSVYGRLKFESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P V+    + ++ +D R DT+R+SGAGGQHVNTTDS
Sbjct: 186 RVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVNLNPADIRFDTFRSSGAGGQHVNTTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVR+THIPTG VV+CQQERSQHKN+AQA  ML +K+ ++++Q + + A+         G 
Sbjct: 246 AVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRDLVGSGD 305

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R N+       +++GDLD+ + A L 
Sbjct: 306 RSERIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALLR 349


>gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
 gi|238687578|sp|B0K1F7|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
          Length = 356

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 190/342 (55%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 76  ALEEDDCSILQE---TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D+          S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P V + +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLPEV-EEVDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I E+ K+++G G + 
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMAL--QEQQREIAETRKSQVGTGERS 301

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 302 ERIRTYNY-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
 gi|226739100|sp|B8FEA2|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 355

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 176/346 (50%), Gaps = 13/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   QR   + +   DP +  +    +  +RE   L   +   +E +  L     
Sbjct: 1   MLDRLEGVEQRFLEVESLLSDPKIVGDQKVYQKYVREHADLSKVVEAYREYKQVLEGLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  +  D  I     + + R+  E     +  +   L     D  +  LE+ AG GG
Sbjct: 61  SKELLKD-PDPDIKDLAKEEIDRLDKEQVRLEDELKILLLPKDPNDDKNVILEIRAGTGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE R +K E L  H     GIK    +I G   Y   K E G 
Sbjct: 120 DEAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMITGQGVYSAFKFESGT 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + ++I+I  S+ R+D YR+ GAGGQHVNTTD
Sbjct: 180 HRVQRVPVTEAQGRIHTSACTVAVLPEA-EEVDIQIDPSEIRVDVYRSQGAGGQHVNTTD 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQHKNKA+A  +LRA+L +  +  +E+ A+I    K+++G
Sbjct: 239 SAVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAV--QEQNASISAERKSQVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R  +       ++ G + + + A 
Sbjct: 297 SGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESIMAGQISEIVDAL 341


>gi|90407674|ref|ZP_01215854.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
 gi|90311265|gb|EAS39370.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
          Length = 363

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 183/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP    +  + + L +E   L+  +   K  Q  + D      +
Sbjct: 9   LEGLVERYEEVQALLGDPATLADQDKYRKLTKEYSQLEVVVLSFKGYQGAVEDLESAK-M 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE+DD  + +   + ++  K  +E      +   L     D  + Y+E+ AGAGG E+ 
Sbjct: 68  MLEDDDPEMQEMAVEEVKEAKATLETLSSELEILLLPKDPNDDRNCYIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ + +K++ E +  +  E+ G K     I+G  AYG +K E G HR+ 
Sbjct: 128 IFAGNLFRMYSKYIDSKKWRLEIMNTNASEQGGYKEVIAKIEGEGAYGIMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++  I I+ +D ++DT+RASGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVVVMPEVPEAEAIVINPADLKVDTFRASGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTG VV+CQ +RSQHKN+AQA ++L+A+L + E +K      +   S    G    
Sbjct: 248 LTHIPTGTVVECQDQRSQHKNRAQAMSVLQARLQQAEDEKNHAEEQVIRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      D+L+G+LD  +   L
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYCLHDILEGELDALLDPIL 347


>gi|167764194|ref|ZP_02436321.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
 gi|167698310|gb|EDS14889.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
          Length = 372

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 208/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KVLADELQLAFDFYKDE--LVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATISNLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I ++    DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364


>gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1]
 gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32]
 gi|166223604|sp|A4Y3J8|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223606|sp|A1RNE1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           W3-18-1]
 gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           putrefaciens CN-32]
 gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
          Length = 363

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 117/340 (34%), Positives = 186/340 (54%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K E+E  + E     L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEMKAAKAELERLESELQILLLPKDPNDDTNAFIEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQMEVMSCNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++R+Y   P   V + R N+     ++V++GDLD  +   
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILTPL 346


>gi|261881148|ref|ZP_06007575.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
 gi|270332153|gb|EFA42939.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
          Length = 374

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 209/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W +   A+  M++ + L N +    +++ 
Sbjct: 12  ERTTKLHHYLNIDKKQIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGLQNWLKDYSDVEL 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +   EE      +E   +  ++   +E  +F+++L  E DS DA L++++G
Sbjct: 72  LANELELAFDYYKEE--LVTEEEVDADYAKVIKAIEDLEFKNMLRSEEDSMDAVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA ML+RMY RW E   +K     + DG+EAGIKS T+ ++ G  AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWCESHGYKVTITNLQDGDEAGIKSVTMTVEGGEFAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S+++ P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPYNAQGKRMTSFASVFISPLVDDTIEVYVDPARLSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KNKA+A  +L+++LY+ E++KR E 
Sbjct: 250 NKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNKAKAMLLLKSQLYDREMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +    V+DGDLD F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGDLDGFIKAYLM 365


>gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 360

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 176/342 (51%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +                  G    
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 308 RIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348


>gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|238687641|sp|B0K7G6|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 356

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 190/342 (55%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL
Sbjct: 5   LQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 76  ALEEDDCSILQE---TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D+          S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P V + +++EI+ +D +ID +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLPEV-EEVDVEINPNDIKIDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I E+ K+++G G + 
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMAL--QEQQREIAETRKSQVGTGERS 301

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342


>gi|188590258|ref|YP_001919883.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|238689644|sp|B2UZI5|RF1_CLOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188500539|gb|ACD53675.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 360

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 194/344 (56%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +
Sbjct: 9   IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68

Query: 79  EDDCSILQETSDNLQRI-KLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  ++ +  + + E+E     Q   L     D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMKEMLNEEISSLAEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS  ++ V P V D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTVTVAVLPEV-DDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV CQ E+SQ KNK +A  +LR++L+  E  ++E    I    K+++G G    +
Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLF--EKAEQERADGIAADRKSQVGTGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +        LDG++ + + A +   +
Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQ 348


>gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
          Length = 360

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 183/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + +  + D+L   E+
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLDWRQ-VQDDLATAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + ++  +  +   +       L     D  D +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEEIKAARGRLADLEQHLQILLLPKDPDDERDCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKVSGDGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEVASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++R+Y   P   V D R N+      +V++G LD+ ++  +
Sbjct: 306 RVRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIEPIV 345


>gi|167837158|ref|ZP_02464041.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis MSMB43]
          Length = 248

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|163788169|ref|ZP_02182615.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
 gi|159876489|gb|EDP70547.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
          Length = 315

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 142/308 (46%), Positives = 212/308 (68%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +   + ++     Q    D  ++ E   E  D + ++   +  ++    +E  +F+
Sbjct: 1   MKSIREKKSWVNDYNAAQTLYEDLEVIYEFYKE--DEAPMENVENRFEKAVNAIEKLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E DS  A L++ AGAGGTES DWA+ML+RMY  +AEK  FK + L   +G+ AGI
Sbjct: 59  NMLSEEGDSLSAVLQITAGAGGTESCDWASMLMRMYLMYAEKSGFKVKELNHQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ 
Sbjct: 119 KTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++ H P+G+ +QC + RSQH N+ +A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLHHKPSGIQIQCSETRSQHDNRTRAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQK+    +  E+ K +I WG QIR+YV+ PY++VKD+R+  E  +   V+DGD++ 
Sbjct: 239 EIELQKQMAQRDDIEAGKMKIEWGSQIRNYVMHPYKLVKDVRSAHETGNVDAVMDGDIEP 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLMM 306


>gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185]
 gi|166223602|sp|A6WSF0|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185]
          Length = 363

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 186/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQADLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K ++E+ +       L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGEGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|253571104|ref|ZP_04848511.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
 gi|251839057|gb|EES67141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
          Length = 354

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 134/350 (38%), Positives = 205/350 (58%), Gaps = 11/350 (3%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D    ++     +T+ P  W +  +A+  M+  + L   I    E++    +  
Sbjct: 1   GGIFDIDGKKIQVEEEQLRTQAPGFWDDQKKAEAQMKLVKDLQKWIDGYNEVKTLADELE 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +  +   EE       +      +    VE  + +++L  EAD     L++++GAGGTES
Sbjct: 61  LSFDFYKEE--LVTEGDVDAAYAKASEAVEALELKNMLRDEADQMACVLKINSGAGGTES 118

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRL
Sbjct: 119 QDWASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRL 178

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S V
Sbjct: 179 VRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGV 238

Query: 251 RITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R       E+ 
Sbjct: 239 RLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAG 298

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYV    + VKD RTN + +  + V+DG +++F+KA L 
Sbjct: 299 KKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIEEFIKAYLM 347


>gi|281425018|ref|ZP_06255931.1| peptide chain release factor 2 [Prevotella oris F0302]
 gi|281400862|gb|EFB31693.1| peptide chain release factor 2 [Prevotella oris F0302]
          Length = 378

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ + + L      D           +T+ P  W +   A+  MR+ + ++  +      
Sbjct: 10  ITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYNAC 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E   +  +    VE  + +++L  E DS DA L+++
Sbjct: 70  RQLTDELQLAFDFYKDEMVSE--EEVDADYAKAVKAVEDLELKNMLRQEEDSMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RW+E   +  +  +I DG+EAGIKS T+ I+ G  AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L+KR+
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQ 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+ K +I WG QIRSYV    + VKD RT  + +    V+DG LD F+KA L 
Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365


>gi|220915515|ref|YP_002490819.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|254790857|sp|B8JAU2|RF1_ANAD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219953369|gb|ACL63753.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 370

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 186/340 (54%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L     DP +  N    + + +ER  ++  ++ ++  +  L D     E 
Sbjct: 10  LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEG-NEA 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L + D  + +   + L +++ +V    E  +   +     D  D  +E+ AGAGG E+ 
Sbjct: 69  LLADKDPELRELAKEELAQLRPQVDPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAG 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ 
Sbjct: 129 LFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + I+++++ +D  +D +R++G+GGQ VNTTDSAVR
Sbjct: 189 RVPATEAQGRIHTSTVTVAVMPEA-EEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH PTG+VV+CQQE+SQ KN+  A  MLRAKL+E+E +++    +    S+   G    
Sbjct: 248 LTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKSQVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 308 KIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346


>gi|197120814|ref|YP_002132765.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
 gi|238689845|sp|B4UAY8|RF1_ANASK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|196170663|gb|ACG71636.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
          Length = 370

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 186/340 (54%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L     DP +  N    + + +ER  ++  ++ ++  +  L D     E 
Sbjct: 10  LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEG-NEA 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L + D  + +   + L +++ +VE  +       +     D  D  +E+ AGAGG E+ 
Sbjct: 69  LLADKDPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAG 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ 
Sbjct: 129 LFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + I+++++ +D  +D +R++G+GGQ VNTTDSAVR
Sbjct: 189 RVPATEAQGRIHTSTVTVAVMPEA-EEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH PTG+VV+CQQE+SQ KN+  A  MLRAKL+E+E +++    +    S+   G    
Sbjct: 248 LTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKSQVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 308 KIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346


>gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|189039990|sp|A9L2D4|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678]
          Length = 363

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 186/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K ++E+ +       L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|71083436|ref|YP_266155.1| peptide chain release factor 2 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062549|gb|AAZ21552.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 284

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 172/280 (61%), Positives = 225/280 (80%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + ELALEE + S++ E  ++++ +K   +  + +  LS E DS D Y+E+HAGAGGTESQ
Sbjct: 1   MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLDCYIEIHAGAGGTESQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML RMY +W++ + FK+E +  H GEEAGIKS+T+ I+G   +GWLK E G+HRLV
Sbjct: 61  DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS +RRHTSF+SIW+YPVVD++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 121 RISPFDSGARRHTSFASIWIYPVVDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+ +VVQCQ ERSQHKNK    NML+A+LY+ EL+K+E+ +   ESSK+EIGWG Q
Sbjct: 181 ITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL PY+MVKD RTN E ++P  VLDG++DDF++++L
Sbjct: 241 IRSYVLHPYRMVKDNRTNFESSNPDKVLDGEIDDFLESSL 280


>gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
 gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
          Length = 358

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 181/350 (51%), Gaps = 8/350 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  D+ + R   L ++ ++P +  +    + LM+E+  L   +    E +       
Sbjct: 2   DMFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAIT 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAG 126
              E+   E D  + +   + L   K  VE  + E     L     D  +  +E+ AGAG
Sbjct: 62  DSEEMLEMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ES  +A  + RMY  +AE R +KTE +   +    G K    ++ G   Y  +K E G
Sbjct: 122 GDESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTT
Sbjct: 182 VHRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVVIDEKDIRIDVMRASGNGGQCVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++        S+   
Sbjct: 241 DSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGT 300

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V + R  +      ++++GDLD+ + + +A  +
Sbjct: 301 GDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDSLIAADQ 349


>gi|53804790|ref|YP_113526.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
 gi|61214591|sp|Q60A21|RF1_METCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53758551|gb|AAU92842.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
          Length = 360

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N   R   +      P +  +    K L RE   L+  ++  +  ++ L        L
Sbjct: 9   LENLSHRFEEITGLLATPEVQNDQNRFKALSREYAQLEPCVACFRRYRETLEGLDHAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L++ D  +     + L+  +   +      Q   L     D  + +LEV AG GG E+ 
Sbjct: 69  -LQDPDPEVRSLAREELETGRKRCDALEQELQILLLPRDPNDERNVFLEVRAGTGGAEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ ++ E +   +GE  G K   + I G N Y  LK E G HR+ 
Sbjct: 128 IFAGDLQRMYSRYAERQGWRAEIVSESEGEHGGYKEVVMRISGQNVYSRLKFEAGTHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ + P   D +EI+I+ +D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPTTEAQGRIHTSACTVAILPEF-DDVEIDINPADLRIDTFRASGAGGQHVNRTDSAIR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG VV+CQ ERSQHKN+A+A ++L+A++  L   + ++ + I  S K ++G G  
Sbjct: 247 ITHIPTGTVVECQDERSQHKNRARAMSLLQARI--LAAAQEKQNSEIAASRKLQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R N+       +++GDLD  +   L
Sbjct: 305 SERIRTYNF-PQGRLTDHRINLTIYRLDAIMEGDLDPVIDPLL 346


>gi|213962528|ref|ZP_03390790.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
 gi|213954854|gb|EEB66174.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
          Length = 317

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 142/309 (45%), Positives = 213/309 (68%), Gaps = 2/309 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +MRE +     +   +E +    D  +LL+   E +  +   E      +    +E  +F
Sbjct: 1   MMRELRTQKKWVEDYEEAESLTSDVEVLLDFFKEGE--ATADEVDQQYAQALHAIEALEF 58

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AG
Sbjct: 59  RNMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAG 118

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+
Sbjct: 119 IKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEIN 178

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++L
Sbjct: 179 PADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQL 238

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RTN E T    V++G+LD
Sbjct: 239 YEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELD 298

Query: 345 DFMKATLAI 353
           +F+KA L +
Sbjct: 299 EFLKAYLML 307


>gi|295697770|ref|YP_003591008.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
 gi|295413372|gb|ADG07864.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
          Length = 355

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 179/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L  +  DP +  +  + +   +E+  L+  +   +E +  +       E+
Sbjct: 5   LQAIEERYEDLGRRLCDPDVLADPEKLRTYSKEQADLEETVQTYREYKQVVSALREAKEM 64

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +     +  +   + E+E   Q   L     D  +  +E+   AGG E+ 
Sbjct: 65  FEERLDEEMREWVKSEIAALGHRREELEAKLQILLLPRDPNDDKNVIVEIRGAAGGEEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ ++ E ++ H  +  G K     ++G  AY  LK E G HR+ 
Sbjct: 125 LFAADLFRMYTRYAERQGWRVEMIDSHPTDLGGFKEVVFSVQGRGAYSRLKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS ++        + +E+EI E D RIDT+ ++G GGQ VNTT SAVR
Sbjct: 185 RVPTTESGGRIHTSTAT-VAVMPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KN+ +A  +LRA+LY  E  +RE+   + ++ K+ +G G  
Sbjct: 244 ITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLY--EKYRREQQEELAQTRKSLVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VLDGDLD+ + A +A  +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLHRLDAVLDGDLDEIIHALIAADR 347


>gi|307731136|ref|YP_003908360.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
 gi|307585671|gb|ADN59069.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
          Length = 360

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N  + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNRDQYRKLTREHAELGPVVEQYALWRQAMHDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+ +   + ++  +  +E      Q   L     D  + +LE+ AG GG ES 
Sbjct: 69  LA---DASMREFAEEEIRAARERMEQLGGKLQTMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSH--EQQAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGALVS 346


>gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
 gi|166027103|gb|EDR45860.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
          Length = 376

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 187/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  + ++ ++P +  +    + LM+E+  L   +   KE +    +   
Sbjct: 21  MFDKLEDLLIRLEEILSELQEPDVASDPNRFRKLMKEQSELTPIVEAYKEYKACKQNIEE 80

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 81  SLELLNEESDEDMRELAKEELNESKARVEELEHELKILLLPKDPNDDKNVVVEIRAGAGG 140

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE +++K E +E  +    G+K+ T +I G  AY  +K E GV
Sbjct: 141 DEAALFAAEIYRMYLHYAESKRWKVELVECEEIGIGGMKNVTFMIDGQGAYSMMKYESGV 200

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 201 HRVQRVPETESGGRIHTSTITVAVMPEA-EDVDVHIDEKDIRIDVMRASGNGGQCVNTTD 259

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY+LE  ++ +  A   +S     
Sbjct: 260 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDLECQKQHDAEAEARKSQIGTG 319

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + + A +A  +
Sbjct: 320 DRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 367


>gi|281421022|ref|ZP_06252021.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
 gi|281404940|gb|EFB35620.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
          Length = 375

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 125/356 (35%), Positives = 208/356 (58%), Gaps = 12/356 (3%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           + + L    + D           +T+ P  W++   A+  M++ + +   +   K ++  
Sbjct: 13  RADALHHYLNIDQKKVEFEEEQLRTQAPDFWEDPKYAQEQMKKVKGIQKWLDGYKTVRLY 72

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             +  +  +   +E      +E   +  +    +E  + +++L  + D  D  L++++GA
Sbjct: 73  ADELQLAFDFYKDE--MVTEEEVDADYAKAIKAIEDLELKNMLRQKEDPMDCVLKINSGA 130

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKGE 184
           GGTESQDWA ML+RMY RW+E   +K    ++ +G+EAGIKS T+ I+ G  AYG+LK E
Sbjct: 131 GGTESQDWAQMLMRMYMRWSEAHGYKVTITDMQEGDEAGIKSVTMTIEGGEYAYGYLKSE 190

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN
Sbjct: 191 NGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVN 250

Query: 245 TTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             +S VR+ +  T         ++++  + R Q KN+A+A  +L+++LY+  ++KR E  
Sbjct: 251 KVESGVRLRYWYTDPDTGEEEEILIENTETRDQPKNRAKALLLLKSQLYDRAMKKRLEAK 310

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 311 AKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|304438485|ref|ZP_07398425.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304368568|gb|EFM22253.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 354

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 111/347 (31%), Positives = 172/347 (49%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L T   DP +  ++   +   RE   L   +   +  +  L       E+
Sbjct: 5   LAAVEDKYRELETLLSDPSVMADMAVWQRYTREHAALTPIVEAYQSYRRALATIDEDKEM 64

Query: 76  ALEEDDCSILQET--SDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E  D  +             + +    +   LL      D  +  +E+  G GG E+ 
Sbjct: 65  LAEA-DAEMKAMLTEEIAEAEAERDRLAAELPILLLPRDPNDDKNVIVEIRGGVGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ ++TE L  +  E  G K  T L+ G  AY  LK E G HR+ 
Sbjct: 124 LFAASLFRMYARYAERQGWRTEVLSSNPTEIGGFKEITFLVSGAGAYSKLKYESGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+R
Sbjct: 184 RIPVTESGGRIHTSAVTVAVLPEA-EEVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VVQCQ E+SQ KN+ +A  +LRA+LY+    ++E+   +    ++++G G  
Sbjct: 243 ITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYD--RAQQEQADAVAADRRSQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V+DG+LD+ +   +   +
Sbjct: 301 SERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQ 346


>gi|86156794|ref|YP_463579.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|119361506|sp|Q2IMW2|RF1_ANADE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85773305|gb|ABC80142.1| bacterial peptide chain release factor 1 (bRF-1) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 370

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 186/340 (54%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L     DP +  N    + + +ER  ++  ++ ++  +  L D     E 
Sbjct: 10  LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLDDVAG-NEA 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L + D  + +   + L +++ +VE  +       +     D  D  +E+ AGAGG E+ 
Sbjct: 69  LLGDKDPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAG 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ 
Sbjct: 129 LFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + I+++++ +D  +D +R++G+GGQ VNTTDSAVR
Sbjct: 189 RVPATEAQGRIHTSTVTVAVMPEA-EEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH PTG+VV+CQQE+SQ KN+  A  MLRAKL+E+E +++    +    S+   G    
Sbjct: 248 LTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKSQVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 308 KIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346


>gi|183598963|ref|ZP_02960456.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
 gi|188021179|gb|EDU59219.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
          Length = 360

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +        +    D     E+
Sbjct: 9   LEALQERYEEIQAHLADAGVIADQGRFRALSKEYAQLTDVAKCFTAWRTVQEDIETA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 68  ML--DDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFLEIRAGAGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEANRWRVELMSTSDGEHGGFKEVIAKISGESVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P + ++   EI+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAILPELPEAELPEINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR+   A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQAAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQPII 345


>gi|83644569|ref|YP_433004.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
 gi|119361548|sp|Q2SL95|RF1_HAHCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83632612|gb|ABC28579.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
          Length = 360

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 182/343 (53%), Gaps = 7/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              D    R   +     DP +     + K L +E   L+  +   +E Q+ L   +   
Sbjct: 7   LKLDLLKDRYEEVGALLSDPDIISVQEKFKELSKEYAELEPVVQCYQEYQNALN-AIEES 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +L L + D  + +   + L   +       +  Q   L     D ++ +LE+ AG GG E
Sbjct: 66  KLLLNDSDADMREMAKEELAAAEESSEQLEKDLQILLLPRDPRDGSNVFLEIRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY+R+AE +K+K E +    GE  G K     + G N +  LK E G HR
Sbjct: 126 AAIFAGDLFRMYSRYAELKKWKVEIVSESPGEHGGYKEVISRVAGDNVFNLLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ + P V++  +++I+ +D R+DTYRASGAGGQHVN TDSA
Sbjct: 186 VQRVPETESQGRIHTSACTVAILPEVEEVGDVDINPADLRVDTYRASGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGW 308
           +RITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL     +K+ +E A   +S       
Sbjct: 246 IRITHLPSGIVVECQDERSQHKNRAKAMSLLKAKLLSSAQEKQAKEQAQTRKSLVGSGDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R N+      +V+ GDLD  ++  L
Sbjct: 306 SERIRTYNY-PQGRITDHRINLTLYKLEEVVQGDLDPVIQPLL 347


>gi|319779045|ref|YP_004129958.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
 gi|317109069|gb|ADU91815.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
          Length = 355

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  ++    +P +  ++   + L RER  +D  +   KE +    D    +E+
Sbjct: 5   LEQLSQRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEGDLNTAVEM 64

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E   + + RI+   +  Q E L     D    +LE+ AG GG ES  + 
Sbjct: 65  MSDPDLKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTGGDESAIFT 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +  +  E  G +     I+G   YG LK E G HR+ R+ 
Sbjct: 125 GDLFRMYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESGAHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ETESQGRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ +RSQHKNKA+A ++L A++ +++   +E+ +      K+ +G G    +
Sbjct: 245 LPTGIVAECQDDRSQHKNKARAMSVLAARINDIKR--QEQQSKEAAERKSLVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++G LD+   A ++ ++
Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLQQIMEGSLDELTNALISERQ 345


>gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 360

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   D    RL  LN       L  ++   + L RE   L   +      +    D    
Sbjct: 6   LVKLDQLADRLGELNELLTQEDLASDMDNYRKLTREHAELGPLVELYDSFRVAEADIATA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  + D     QE     +    ++E   Q   L     D  + +LE+ AG GG ES 
Sbjct: 66  HDMLADPDMKDFAQEEILAARARTEQIEADLQTMLLPKDPNDERNLFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+ +++ E +     +  G K   + + G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYTRYAERNRWQVEMVSESSSDVGGYKEVIVRVIGNGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P VD+  +++I+ SD RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPTTETQGRIHTSACTVAVMPEVDEISDVDINPSDLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ +RSQHKNKA A  +L A++ + ++  RE+ +    + K+ IG G  
Sbjct: 246 ITHLPTGIVVECQDDRSQHKNKASALKVLAARIKDAQV--REQQSKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDL+D   A  A
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLNDLTGALAA 346


>gi|227824241|ref|ZP_03989073.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226904740|gb|EEH90658.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 359

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 178/348 (51%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLIL 72
                 R   L  K  DP +  +  + +   +    L + +   +   ++Q    D+  L
Sbjct: 8   LQALEDRYIDLEAKISDPSVISDQAQWQKYTKAHAKLTDVVETYRAYQKLQKTYDDDQAL 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
           LE+   E D  +       ++ +  ++E  +       L     D  +  +E+ AGAGG 
Sbjct: 68  LEMG--ESDEELAAMAEMEMKELAPQLEDYEKRLTILLLPKDPNDEKNIIMEIRAGAGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE + ++ E ++       G K    ++ G + Y  +K E GVH
Sbjct: 126 EAALFAGDLFRMYTRYAETKGWRVELMDSSPTGLGGFKEVIFMVSGSDVYSHMKFESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   + ++++I  SD RIDTYRA GAGGQ+VN T+S
Sbjct: 186 RVQRVPETEAQGRIHTSTATVAVMPEA-EEVDVDIKMSDIRIDTYRAGGAGGQYVNKTES 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVR+THIPTG+V QCQ E+SQ KN+ +   +LR+++YE   + +         S+   G 
Sbjct: 245 AVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRIYEAAQEAQRAAEESERRSQVGTGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +     +DV++GDLD+ + A +  ++
Sbjct: 305 RSERIRTYNF-PQGRVTDHRIGLTLHKLTDVMNGDLDELLGALMTEEQ 351


>gi|170702008|ref|ZP_02892928.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171322226|ref|ZP_02911072.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|172061072|ref|YP_001808724.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|170133098|gb|EDT01506.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171092451|gb|EDT37797.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|171993589|gb|ACB64508.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|325525095|gb|EGD02988.1| peptide chain release factor 2 [Burkholderia sp. TJI49]
          Length = 248

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 196/246 (79%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDF 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 ISASLK 245


>gi|194016506|ref|ZP_03055120.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
 gi|194011979|gb|EDW21547.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
          Length = 355

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 108/351 (30%), Positives = 178/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +        
Sbjct: 1   MLDRLKSIEERYEKLNEYLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60

Query: 72  LLELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  +     + +    +  +   +  +   +     D+ +  +EV   AGG
Sbjct: 61  AKAMLEEKLDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEMQGWKTEVMEANVTGTGGYKEIIFMISGKGAYSRLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQREAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQ 347


>gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
          Length = 309

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 144/296 (48%), Positives = 201/296 (67%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +    +    L D   L+ELA E +D +  QE    L  ++ ++   +   +LSGE D +
Sbjct: 1   MGAFDKALRGLDDAQTLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRS 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + +++++AGAGGT+S DWA ML+RMYTR+ E+R ++ E  ++  GEEAG K+ +L I+G 
Sbjct: 61  NCFMDINAGAGGTDSMDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGE 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E GVHRLVRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D  +   R 
Sbjct: 121 YAYGYLKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRG 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            GAGGQ VN T S  ++ H+PT +++ CQ ERSQ  NK  A+ +LRA+LYELEL+KRE  
Sbjct: 181 GGAGGQKVNKTSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +  E+ K +I +G QIRSYVL PY+MVKDLRT +E  +   VLDGDL+ F+ A L
Sbjct: 241 RDAAEAQKKDISFGSQIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 296


>gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
 gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
          Length = 360

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEEDIATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
           A    D  +     D L+  +  +E  + E     L     D  + ++E+ AG GG ES 
Sbjct: 69  AA---DPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ + P  D   +I+I+ +D RIDT+RASGAGGQH+N T+SAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKTESAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G  
Sbjct: 246 ITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++DGD+D+ + A  A
Sbjct: 304 SDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGALAA 346


>gi|315223860|ref|ZP_07865708.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
 gi|314946190|gb|EFS98191.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
          Length = 315

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 141/308 (45%), Positives = 215/308 (69%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE +     +   +E ++   D  +LL+   E +  +  ++      +    +E  +F 
Sbjct: 1   MRELRTKKKWVEDYEEAENLTSDIEVLLDFFKEGE--ATAEDVDHQYTQALHAIEALEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AGI
Sbjct: 59  NMLSDEGDTMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ 
Sbjct: 119 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LY
Sbjct: 179 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RTN E T    V++G+LD+
Sbjct: 239 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDE 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLML 306


>gi|313157406|gb|EFR56829.1| putative peptide chain release factor 2 [Alistipes sp. HGB5]
          Length = 370

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 135/358 (37%), Positives = 206/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   L    + +     L     KT+ P  W N  +A+  +R    +   +     +
Sbjct: 10  LEQRSGALERCLNIEQKRIDLLNEEEKTQVPDFWDNPDQAREQLRRVAAIKAWVDDYDAV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  ++ E   E       QE   +  +    +E  +  ++L  + D   A L+++
Sbjct: 70  AKDVEDLALMPEFVKEGVVSE--QEMDAHYAQTLERIEKLEMRNMLRRDEDKLGAILDIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLRMYTRW E   +K + L+   G+E G+KS TL  +G  AYG+LK
Sbjct: 128 AGAGGTEALDWASMLLRMYTRWGEAHGYKVKVLDYQAGDEVGVKSCTLEFEGEYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+VR+SP+++N++R T+F+S++V P VDD+IE+ ++ SD   DT+RASGAGGQ+
Sbjct: 188 SENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEVTVNPSDIEWDTFRASGAGGQN 247

Query: 243 VNTTDSAVRITHI----PTGVVV----QCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++AVR+ +      TG  V    +  + RSQ  N+  A  +L++KLY+ EL KR  
Sbjct: 248 VNKVETAVRLRYHGKDADTGEAVEFLIENMETRSQLMNRENAMRILKSKLYQRELDKRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+SK +I WG QIRSYV    + VKD RT ++ ++   V+DG LD+F+KA L 
Sbjct: 308 TQQALEASKKKIEWGSQIRSYVFDD-RRVKDHRTGVQTSAVEAVMDGGLDEFIKAYLM 364


>gi|299142161|ref|ZP_07035294.1| peptide chain release factor 2, programmed [Prevotella oris C735]
 gi|298576250|gb|EFI48123.1| peptide chain release factor 2, programmed [Prevotella oris C735]
          Length = 378

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ + + L      D           +T+ P  W +   A+  MR+ + ++  +      
Sbjct: 10  ITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYDAC 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E   +  +    VE  + +++L  E DS DA L+++
Sbjct: 70  RQLTDELQLAFDFYKDEMVSE--EEVDADYAKAVKAVEDLELKNMLRQEEDSMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RW+E   +  +  +I DG+EAGIKS T+ I+ G  AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L+KR+
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQ 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+ K +I WG QIRSYV    + VKD RT  + +    V+DG LD F+KA L 
Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365


>gi|312795903|ref|YP_004028825.1| peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI
           454]
 gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia
           rhizoxinica HKI 454]
          Length = 365

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 181/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  LN       +  ++ + + L RE   L   +    + +    D     EL
Sbjct: 14  LEQLTKRLPELNELLSREDVTSDLDQYRKLTREHAELAPVVEQYAQWKTARNDEATAQEL 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D L   +  +E  + +     L     D  + ++E+ AG GG ES 
Sbjct: 74  LT---DPSMRDFAEDELNTARSRMEQLERDLQKMLLPKDPNDERNIFVEIRAGTGGDESA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 131 LFAGDLLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRIIGQGAYSRLKFESGGHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  EIE++ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 191 RVPATETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDTFRASGAGGQHINKTDSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +   +E+ A    + K+ +G G  
Sbjct: 251 ITHLPTGIVVECQDDRSQHKNKDRAMKVLAARIKDKQ--YQEQHAKEAATRKSLVGSGDR 308

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD  + A ++
Sbjct: 309 SERIRTYNF-PQGRLTDHRINVTLYKLEQMMDGDLDALIDALVS 351


>gi|325299167|ref|YP_004259084.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
 gi|324318720|gb|ADY36611.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
          Length = 371

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 136/358 (37%), Positives = 209/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N   ++     +T+ P  W +  +A+  M++ + L   I    E+
Sbjct: 10  IKERTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQGWIDGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E       E  +   + +  VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLADELELAFDFYKDELVSE--AEVDEAYVQAQKAVEELELKNMLRSEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|325660746|ref|ZP_08149374.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472820|gb|EGC76030.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 356

 Score =  303 bits (776), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E +        
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   + L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE +++KTE + +++    G K    ++ G   Y  +K E GV
Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++        S+   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347


>gi|331085530|ref|ZP_08334614.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407417|gb|EGG86919.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 358

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E +        
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   + L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE +++KTE + +++    G K    ++ G   Y  +K E GV
Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++        S+   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347


>gi|170718675|ref|YP_001783869.1| peptide chain release factor 2 [Haemophilus somnus 2336]
 gi|168826804|gb|ACA32175.1| peptide chain release factor 2 [Haemophilus somnus 2336]
          Length = 289

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 157/288 (54%), Positives = 209/288 (72%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLEL++E +D +   E     + ++ ++   +F  + SG+ D+ D Y+++ AG+
Sbjct: 1   MEDVDGLLELSVEAEDETTFNEAVAEAEELEKKLATLEFRRMFSGQHDNCDCYVDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW  MLLRMY RWAE + FKTE +E+  G+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWTEMLLRMYLRWAESKGFKTELVEVSSGDVAGLKSATIRIAGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G+HRLVR SP+DSN+RRHTSF++ +VYP +DD IEIEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIEIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYE+E+ K+       E SK++
Sbjct: 181 TESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYEMEMMKKNADKQAMEDSKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287


>gi|119477466|ref|ZP_01617657.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
 gi|119449392|gb|EAW30631.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
          Length = 361

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 182/340 (53%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN V R   L     D  +  +  + + L +E   ++  +   +     L D      L
Sbjct: 9   LDNLVDRHEELGALLSDGEVIGDQNKYRALSKEYAEVEPVVKCYENYCQTLDDIEEAKSL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + L   + +    +E  Q   L     DS++ +LE+ AG GG E+ 
Sbjct: 69  LKD-GDADMREMAQEELSGAQSQRDVMMEELQRLLLPRDPNDSHNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMYTR+AE + +K E +    G+  G K     + G + Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYTRYAENKGWKIEIISERSGDHGGYKELISRVSGQDVYAHLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD   E+EI++SD RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAIMPEVDSVDEVEINKSDLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           ITHIP+G+VV+CQ ERSQHKNKA+A ++L+++L   ++ ++++E ++   S         
Sbjct: 248 ITHIPSGLVVECQDERSQHKNKARAMSLLQSRLLTGIQDKQQQEQSDERRSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+     ++V++G L D +   
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLAEVMEGALGDVIDPL 346


>gi|229064980|ref|ZP_04200278.1| Peptide chain release factor 1 [Bacillus cereus AH603]
 gi|228716281|gb|EEL67993.1| Peptide chain release factor 1 [Bacillus cereus AH603]
          Length = 358

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 188/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +
Sbjct: 1   MNGVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEINIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|329964588|ref|ZP_08301642.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
 gi|328524988|gb|EGF52040.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
          Length = 371

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 209/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERAEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLAEELQLSFDFYKDE--LVTEEEVDEAYVKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETYGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|91762141|ref|ZP_01264106.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717943|gb|EAS84593.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 284

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 169/280 (60%), Positives = 225/280 (80%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + ELALEE + S++ E  ++++ +K   +  + +  LS E DS + Y+E+HAGAGGTESQ
Sbjct: 1   MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLNCYIEIHAGAGGTESQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML RMY +W++ + FK+E +  H GEEAGIKS+T+ I+G   +GWLK E G+HRLV
Sbjct: 61  DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS +RRHTSF+SIW+YPV+D++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 121 RISPFDSGARRHTSFASIWIYPVIDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+ +VVQCQ ERSQHKNK    NML+A+LY+ EL+K+E+ +   ESSK+EIGWG Q
Sbjct: 181 ITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL PY+MVKD RTN E ++P  +LDG++DDF++++L
Sbjct: 241 IRSYVLHPYRMVKDNRTNFESSNPDKILDGEIDDFLESSL 280


>gi|299144121|ref|ZP_07037201.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518606|gb|EFI42345.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 356

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 187/351 (53%), Gaps = 16/351 (4%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
            +FD     ++   L  K  D ++  +    + +  E   ++  +   +E +  + +   
Sbjct: 6   QVFD-----EKYIELEQKLMDINVINDSKLYQKIAIEHAEIEPVVLKYREYKTLISNLED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  +     ++++  + ++   +       +     DS +  +E+ AGAGG
Sbjct: 61  NKEMLNENLDDDMRDLIKEDIKDSEEKISVLEDEIKILLIPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L R Y R+AE+  +K E +  ++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAGVLFRQYVRFAERMGWKVEIMSTNEIGIGGYKEVIFMILGRGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   + +EI+I  SD + D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESSGRIHTSTATVAVLPEA-EDVEIDIEPSDIKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ +NK +A  +L+ KLY+L+L  +E+ A +    K++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLRNKEKAMKILKTKLYDLKL--QEQNAELSMQKKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++DGDLD+ + A +A  +
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLHKIDSIVDGDLDEIIDALIASDQ 347


>gi|284053267|ref|ZP_06383477.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
          Length = 309

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 139/296 (46%), Positives = 201/296 (67%), Gaps = 1/296 (0%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           ++ +  L D   + EL   EDD S+ QE   N+  +  +++  + + LLSG  D + A L
Sbjct: 5   QDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVL 64

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGT++QDWA MLLRMYTRW E + +K    E+ +G+EAGIKSATL ++GP AYG
Sbjct: 65  TINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEMEGPYAYG 124

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGA 238
           +LK E+G HRLVRISP+++N +R TSF+ + + P++D+ +I ++I E D  I T RA G 
Sbjct: 125 YLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGK 184

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++AVRI HIPTG+ V+C QERSQ +N+ +A  +L+AKL  +  ++R +    
Sbjct: 185 GGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAE 244

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 E  WG QIR+YV  PYQMVKDLRT  E T+ +DV++G+LD F++A L  +
Sbjct: 245 IRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYLRQE 300


>gi|238927406|ref|ZP_04659166.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
 gi|238884688|gb|EEQ48326.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
          Length = 354

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 111/347 (31%), Positives = 172/347 (49%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L T   DP +  ++   +   RE   L   +   +  +  L       E+
Sbjct: 5   LAAVADKYRELETLLSDPSVMADMEAWQRYTREHAALTPIVEAYQAYRRALAIIDEDKEM 64

Query: 76  ALEEDDCSILQET--SDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E  D  +             + +    +   LL      D  +  +E+  G GG E+ 
Sbjct: 65  LSEA-DAEMKAMLTEEIAAAEAERDRLAAELPILLLPRDPNDEKNVIVEIRGGVGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ ++TE L  +  E  G K  T L+ G  AY  LK E G HR+ 
Sbjct: 124 LFAASLFRMYVRYAERQGWRTEVLSSNPTEIGGFKEITFLVSGTAAYSKLKYESGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+R
Sbjct: 184 RIPVTESGGRIHTSAVTVAVLPEA-EEVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VVQCQ E+SQ KN+ +A  +LRA+LY+    ++E+   +    ++++G G  
Sbjct: 243 ITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYD--RAQQEQADAVAADRRSQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V+DG+LD+ +   +   +
Sbjct: 301 SERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQ 346


>gi|261343909|ref|ZP_05971554.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
 gi|282568295|gb|EFB73830.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
          Length = 360

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +  +     Q    D      L
Sbjct: 9   LEALQERYEEIQAHLADAGVIADQDRFRALSKEYAQLTDVANCFTAWQAVQEDIETAQML 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K       +  Q   L     D  + ++E+ AGAGG E+ 
Sbjct: 69  L---DDPEMKEMAQEELKDAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  +I V P + ++   EIS +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTIAVLPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR E  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMAKRHEAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPII 345


>gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
 gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
          Length = 360

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNELLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D ++  +  +   + E     L     D  + +LE+ AG GG ES 
Sbjct: 69  LA---DPSMRDFAEDEIRSARDRMARLELELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVS 346


>gi|260589191|ref|ZP_05855104.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
 gi|260540272|gb|EEX20841.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
          Length = 358

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  +  +  +P +  +    + LM+E+  L        E ++       
Sbjct: 1   MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLMMLDEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE + ++TE L +++    G K  T +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+ E+  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMPEA-EEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LY++ELQKR +       S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAEAEARRSQVGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEIIDNLIAADQ 347


>gi|333029894|ref|ZP_08457955.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
 gi|332740491|gb|EGJ70973.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
          Length = 361

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 170/344 (49%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 10  LEDLVARFDEVSTLITDPAVIADQTRFVKLTKEYKELSDLMNARKEYIAALQGVTEAKEI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L+  +  +   +       +     D  +A +E+ AG GG E+ 
Sbjct: 70  IAHESDPEMKEMAREELEDCETRIPELEETIKLLLIPKDPQDERNAIMEIRAGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + +  E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 LFAGDLFRMYSKYCENKGWTVEINNFNEGTAGGFKEIVFSVSGDNVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++E++ +D  + T R+ GAGGQHVN  ++ V 
Sbjct: 190 RVPETESQGRVHTSAITVAVLPEA-EEVDVELNPADIELQTARSGGAGGQHVNKVETKVM 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH PTG+VV CQ+ RSQH N+ +A  +LR+KLYE+E +K  +  +    S    G    
Sbjct: 249 LTHKPTGLVVICQEGRSQHSNREKAMQILRSKLYEIEYEKANKERSEQRKSLVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N    +    +DGD+ D +   +  +
Sbjct: 309 KIRTYNY-PQGRITDHRINYTIYNLQAFMDGDIQDCIDHLIVAE 351


>gi|331082607|ref|ZP_08331730.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400226|gb|EGG79868.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 358

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  +  +  +P +  +    + LM+E+  L        E ++       
Sbjct: 1   MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLMMLDEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE + ++TE L +++    G K  T +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+ E+  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMPEA-EEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LY++ELQKR +       S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAEAEARRSQVGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEVIDNLIAADQ 347


>gi|323527482|ref|YP_004229635.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
 gi|323384484|gb|ADX56575.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
          Length = 356

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 185/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 5   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMHDAATAQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D S+     + ++  +  +E    + +++L      D  + +LE+ AG GG ES 
Sbjct: 65  LT---DASMRDFAEEEIRAARDRMEQLGGELQTMLLPKDPNDDRNIFLEIRAGTGGDESA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ 
Sbjct: 122 LFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 182 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 242 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSH--EQQAKEAATRKSLIGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 300 SERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGALVS 342


>gi|271500557|ref|YP_003333582.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
 gi|270344112|gb|ACZ76877.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
          Length = 361

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     +  Q    D     EL
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFERWQQTQDDIETA-EL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     D LQ  K+  E  + +           D    +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMRDLAQDELQAAKVASEDLEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +   DGE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEVIAKVVGDGAYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+ SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEVPEAELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMHKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIQPIV 345


>gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH]
 gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|119361517|sp|Q2SUG2|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
          Length = 360

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 181/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       + E     +R+       Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
          Length = 360

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       + E      R+       Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDELRGARDRMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4]
 gi|166223603|sp|A3QH30|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           loihica PV-4]
          Length = 361

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 184/340 (54%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  +    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDAEIIADQERFRALSKEYSQLEDVVKSFKAYRQAEEDLASAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  + +   + ++  K  ++      Q   L     D N+A+LE+ AGAGG E+ 
Sbjct: 69  -LAEDDADLKEMAQEEIKEAKATLDVLEGELQILLLPKDPKDDNNAFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+ E  +++ E +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYCEANRWQMEIMNANEGEHGGFKEIIVKVSGDGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVVVMPEIPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR         +    G    
Sbjct: 248 ITHIPSGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSEEESTRRNLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++R+Y   P   V + R N+     S+V++GDLD  +   
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLSEVMEGDLDAILGPL 346


>gi|312131222|ref|YP_003998562.1| bacterial peptide chain release factor 1 (brf-1) [Leadbetterella
           byssophila DSM 17132]
 gi|311907768|gb|ADQ18209.1| bacterial peptide chain release factor 1 (bRF-1) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 185/340 (54%), Gaps = 11/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   ++ +   P +  ++ + K + +E + L+  +      +  L       E+
Sbjct: 6   LEGIVERFDEVSQQITMPEVVSDMEKFKKISKEYRDLEKIVQEYNAYKLILAHLDEAKEI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     L  +  + E  +   + LL      DS D+ LE+ AG GG E+ 
Sbjct: 66  LATEKDEEMREMAKLELDELSPKKEEAEERLKELLIPKDPNDSKDSILEIRAGTGGDEAS 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ ++   ++  D    G K   + +KG + YG LK E GVHR+ 
Sbjct: 126 IFAGDLFRMYQRFAAQQGWQFTVMDFTDAPSGGYKEIVVSVKGEDVYGKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D ++++I+ +D R DT+ +SGAGGQ VNTT SAVR
Sbjct: 186 RVPATESQGRIHTSAATVAVLPEA-DEVDVQINMNDIRKDTFCSSGAGGQSVNTTYSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VVQCQ ERSQ KN  +A  +LR++LYE+EL K+ E  +I    K+ +G G  
Sbjct: 245 VTHIPTGLVVQCQDERSQIKNFDKALTVLRSRLYEIELAKQNE--SIAGERKSLVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +IR+Y   P   V D R      +   V++G++ +F++
Sbjct: 303 SDKIRTYNY-PQGRVTDHRIGFTVYNLPHVMEGNIGEFIE 341


>gi|224025165|ref|ZP_03643531.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
 gi|224018401|gb|EEF76399.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
          Length = 371

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 138/357 (38%), Positives = 208/357 (58%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D DN   ++     +T+ P  W +  +A+  M++ + L N I    E++
Sbjct: 11  KERTEALHRYLDIDNKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQNWIEGYNEVK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +   +E       E  D   +    +E  + +++L  EAD  D  L++++
Sbjct: 71  TLADELELSFDFYKDE--LVTEAEVDDAYNKAMQAIEELELKNMLRSEADQMDCVLKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LKG
Sbjct: 129 GAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNV 248

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E 
Sbjct: 249 NKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEE 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 309 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|152979102|ref|YP_001344731.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
 gi|150840825|gb|ABR74796.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
          Length = 374

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 181/339 (53%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L+  +      +    D      L
Sbjct: 23  LDSLAERHEELQALLGDASVINDQDKFRTYSKEYAQLEEVVGAFTRWKKLNQDIEDAQLL 82

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  +E   N   I+   +  Q   L     D  +AYLE+ AG GG E+  +A
Sbjct: 83  LNDPDMKDMAQEEIEQNKAEIEQLEQQLQILLLPKDPHDEYNAYLEIRAGTGGDEAGIFA 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 143 GDLFRMYSRYAESKRWRIETLSANESEQGGYKEIIVKVIGEGVYGQLKFESGGHRVQRVP 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 203 KTESQGRIHTSACTVAVMPELPETELPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +K+  E A+   +         +IR
Sbjct: 263 IPTGIVVECQDERSQHKNKAKAMSVLASRIAQAEQEKQAREQADTRRNLLGSGDRSDKIR 322

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      +V++G +D+ ++  + 
Sbjct: 323 TYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIIT 360


>gi|302875888|ref|YP_003844521.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|307689321|ref|ZP_07631767.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|302578745|gb|ADL52757.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
          Length = 358

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 127/345 (36%), Positives = 191/345 (55%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L   ++  KE +  + D     E+  +
Sbjct: 8   IENKYDELSIKISDPSIMSNQKEWQKLCKEHSDLGIVVNKYKEYKKTIEDIEDNKEMIQD 67

Query: 79  -EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +  S+ ++ +++      E  +   L     D  + Y+E+ AGAGG E+  +
Sbjct: 68  GSLDPELKELASEEIKELEILKNKYEEELRILLLPKDPNDDKNVYVEIRAGAGGEEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           AN L RMY R+AE    + E + I+  +  GIK   ++IKG  AY  LK E GVHR+ R+
Sbjct: 128 ANNLTRMYARYAETHGCRVETISINPTDLGGIKEIVMMIKGTGAYSKLKYESGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S+ R HTS +++ + P V D +EIEIS +D RID +RASG GGQ VNTTDSAVRIT
Sbjct: 188 PDTESSGRIHTSTATVAIMPEV-DDVEIEISANDLRIDVFRASGHGGQCVNTTDSAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ E+SQ KNK +A N+L+A+L+  E  + E  A+I E  K+++G G    
Sbjct: 247 HLPTGIVVSCQDEKSQLKNKEKALNVLKARLF--EKAESERSASIAEDRKSQVGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +        LDG +D+ + A +   +
Sbjct: 305 RIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGAIDEVINALITEDQ 348


>gi|218131879|ref|ZP_03460683.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|317474512|ref|ZP_07933786.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986182|gb|EEC52521.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|316909193|gb|EFV30873.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
          Length = 372

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 209/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  RILADELQLAFDFYKDE--LVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIEIAGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364


>gi|161621297|ref|YP_585342.2| peptide chain release factor 1 [Cupriavidus metallidurans CH34]
 gi|119361586|sp|Q1LIF3|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L        + +    D      L
Sbjct: 9   LDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +  +D +   +  ++  +   ++LL      D  +  LE+ AG GG ES 
Sbjct: 69  L---DDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+R+++ E +     +  G K   + I G  A+  LK E G HR+ 
Sbjct: 126 LFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+  E+EI+ SD R+DT+RASGAGGQHVN TDSAVR
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQH+NK +A  +L A++ +++L  R   A    + +  IG G  
Sbjct: 246 LTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRRNLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++DGDLD+ + A  A
Sbjct: 304 SDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSA 346


>gi|153207868|ref|ZP_01946445.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165918820|ref|ZP_02218906.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212219147|ref|YP_002305934.1| peptide chain release factor 2 [Coxiella burnetii CbuK_Q154]
 gi|120576294|gb|EAX32918.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165917452|gb|EDR36056.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212013409|gb|ACJ20789.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuK_Q154]
          Length = 289

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 159/281 (56%), Positives = 212/281 (75%), Gaps = 1/281 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E +  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E+SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYVL     VKDLRT +E ++   VLDGD+D F++A L 
Sbjct: 241 IRSYVL-DASRVKDLRTGVETSNTQAVLDGDIDLFIEACLK 280


>gi|93006237|ref|YP_580674.1| peptide chain release factor 1 [Psychrobacter cryohalolentis K5]
 gi|119361584|sp|Q1QAW3|RF1_PSYCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|92393915|gb|ABE75190.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           cryohalolentis K5]
          Length = 362

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 184/345 (53%), Gaps = 6/345 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDN 69
               D  V R   +     DP +  +  + + L  E   L +  +  +     +    D 
Sbjct: 6   RLRLDQMVDRYEEVTALLSDPSVISDNNKFRELSVEHSDLMDITTLWQNYVGAEKDQADA 65

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGT 128
             +L+ A + D   ++QE  D+ +   +E+E       L     D   A+LE+ AG GG 
Sbjct: 66  EAMLKEASDPDMKEMMQEEIDSARDTIVEMEEALNLMMLPKDPNDKVPAFLEIRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  L RMY ++A+ + +  E L  ++GE  G K     + G + YG LK E GVH
Sbjct: 126 EAAIFSGDLFRMYQKFAQNQGWTLEILSANEGEHGGYKEIITRVSGNSVYGRLKFESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P V+    ++++ +D R DT+R+SGAGGQHVNTTDS
Sbjct: 186 RVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVDLNPADIRFDTFRSSGAGGQHVNTTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVR+THIPTG VV+CQQERSQHKN+AQA  ML +K+ ++++Q + + A+         G 
Sbjct: 246 AVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRDLVGSGD 305

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R N+       +++GDLD+ + A L 
Sbjct: 306 RSERIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALLR 349


>gi|307304754|ref|ZP_07584504.1| peptide chain release factor 1 [Shewanella baltica BA175]
 gi|306912156|gb|EFN42580.1| peptide chain release factor 1 [Shewanella baltica BA175]
          Length = 363

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 186/337 (55%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVILDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + ++  K ++E+ +       L     D  +A++E+ AGAGG E+ 
Sbjct: 69  -LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ +RSQHKN+AQA ++L A++  LE +KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 308 RVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|332877580|ref|ZP_08445324.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684429|gb|EGJ57282.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 315

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 140/308 (45%), Positives = 211/308 (68%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE +     +   +E +    D  ++L+     D  +  +E      +    +E  +F 
Sbjct: 1   MRELRVKKKWVEDYEEAESLTSDVEVMLDFLK--DGEASAEEVDQQYTQALHAIEALEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AG+
Sbjct: 59  NMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGV 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ 
Sbjct: 119 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LY
Sbjct: 179 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RT  E T    V++G+LDD
Sbjct: 239 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTGYESTDVDSVMNGELDD 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLML 306


>gi|229014499|ref|ZP_04171617.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
 gi|229136148|ref|ZP_04264901.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|229170037|ref|ZP_04297729.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228613462|gb|EEK70595.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228647307|gb|EEL03389.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|228746849|gb|EEL96734.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
          Length = 358

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 188/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEINIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|294501881|ref|YP_003565581.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
 gi|294351818|gb|ADE72147.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
          Length = 355

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  +    R   LN    DP +  N  + +   +E+  +   ++  +E +D   +L +
Sbjct: 1   MFDRLEAVEARYEKLNELLSDPEIVNNPSKLREYSKEQSDIQQTVAAYQEYKDVKEQLSE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  + E+ E  +   +     D  +  +EV   AGG
Sbjct: 61  AKTMLEDKLDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVIMEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAYSKMKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PT  VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A    + K  +G
Sbjct: 240 SAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQREAQAEYDATRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEIIDALVMEDQ 347


>gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147]
 gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786]
          Length = 360

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 183/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D L+  +  +       Q   L     D  + ++E+ AG GG ES 
Sbjct: 69  L---GDASMRDFAEDELRGARERMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|238054474|sp|B5YIQ7|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 353

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 175/343 (51%), Gaps = 8/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               +   +     DP ++ N  E     RE+  L+  ++  +E +  L       E+  
Sbjct: 7   EVENKYEKITQTLSDPKVFSNKDEYMKYSREQAELEPIVTKFREYKRILKQIEEAEEMIK 66

Query: 78  EEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +   + LQ++K       +  +   L     D  +  LE+ AG GG E+  +
Sbjct: 67  -SGDPDLKELAEEELQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTGGEEAALF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY ++AE + +K E ++ H     G K     I G  A+  LK E GVHR+ RI
Sbjct: 126 AANLFRMYAKYAESKGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESGVHRVQRI 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +++ R HTS +++ V P   + ++I+I E D RIDT+ +SG GGQ VNT  SAVRI 
Sbjct: 186 PVTEASGRIHTSTATVAVLPEA-EEVDIKIDEKDLRIDTFCSSGPGGQSVNTAYSAVRIV 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQI 312
           HIPTG++VQCQ ERSQ KN+ +A  +LRA+L E+E QK+E E A   +          +I
Sbjct: 245 HIPTGIIVQCQDERSQIKNREKAMKVLRARLLEIERQKKEAERAAERKGQVGTGERSERI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R  +       VL+G++D+ + A ++  +
Sbjct: 305 RTYNF-PQNRVTDHRIGLTLYKLEQVLNGNIDEIIDALISYYQ 346


>gi|303247215|ref|ZP_07333489.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
 gi|302491374|gb|EFL51262.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
          Length = 307

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 145/300 (48%), Positives = 200/300 (66%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L + I   +++     D    L LA ++    +L   ++ +  +  E+   +  +    E
Sbjct: 2   LTSRIEDGEKLLAARTDLDEWLSLAKDDGSPEVLDALAEQIATLDGELADAELAAFFRSE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+ DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F  + L+   G+EAG+KS TL 
Sbjct: 62  -DNVDAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKEFGVKILDYLPGDEAGLKSVTLQ 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
             GP AYG L  E+G+HRL+RISP+DS+ RRHTSF+S+ VYP     I+I+I E D RID
Sbjct: 121 FSGPYAYGMLAAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGVDIDIDIKEDDLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASG GGQHVN T SA+RITH+PTG+VVQCQ E+SQH+N+  A  +L+A+LY+LEL+K
Sbjct: 181 VFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRETAMKVLKARLYDLELKK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +        SK  IG+G QIR+Y +QPY++VKD RT ++      VLDGDLD F++  L
Sbjct: 241 LQAEKQESYESKNAIGFGSQIRTYTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGYL 300


>gi|154705875|ref|YP_001424983.1| peptide chain release factor 2 [Coxiella burnetii Dugway 5J108-111]
 gi|154355161|gb|ABS76623.1| bacterial peptide chain release factor 2 (RF-2) [Coxiella burnetii
           Dugway 5J108-111]
          Length = 289

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 159/281 (56%), Positives = 211/281 (75%), Gaps = 1/281 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E +  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEVSKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYVL     VKDLRT +E ++   VLDGD+D F++A L 
Sbjct: 241 IRSYVL-DASRVKDLRTGVETSNTQAVLDGDIDLFIEACLK 280


>gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
 gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
          Length = 359

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 117/340 (34%), Positives = 178/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R + LN   +DP L ++    K +MRE  HL   +    E ++ L        L
Sbjct: 5   LEELSKRYAELNDMIQDPELVRDPKRYKEIMREHSHLSQVMDSYAEYKEVLQGISEAQHL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  + +   + L+ ++  V   +       +     +  +  +E+  GAGG E+ 
Sbjct: 65  ITEEDDHDMKEMAREELKALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +K E ++  + E  G K  +  I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  +++ EIEI   D R+D  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEAQGRIHTSAVTVAVLPEAEET-EIEIRPEDLRVDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV  Q E+SQ KNKA+A  +LRA+L++LE  K++   +    S    G    
Sbjct: 244 LTHLPTGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQAERSAARKSMVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+        + G+LD+ + A 
Sbjct: 304 RIRTYNF-PQNRVTDHRINLTLYKLDQFMQGNLDEMLDAL 342


>gi|322832986|ref|YP_004213013.1| peptide chain release factor 1 [Rahnella sp. Y9602]
 gi|321168187|gb|ADW73886.1| peptide chain release factor 1 [Rahnella sp. Y9602]
          Length = 360

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +  + + L RE   L          +    D     E+
Sbjct: 9   LEALQERHEEVQAMLGDAGVIADQDKFRSLSREYSQLTAVSECFLAWRQAQEDLETA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   D ++  K  +E  +       L     D    +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQDEIKECKANIEELEEKLQVLLLPKDPDDERGCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G  AYG  K E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEMRRWRVEIVSASEGEHGGYKEVIAKISGEGAYGQFKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR+ E A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKRQAEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIQPIV 345


>gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98]
 gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14]
 gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91]
 gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9]
 gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210]
 gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894]
 gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC
           13177]
 gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112]
 gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215]
 gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
 gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|61214599|sp|Q63QF0|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361515|sp|Q3JN85|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223535|sp|A3NZS4|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223536|sp|A3NE24|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
          Length = 360

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       + E      R+       Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|157273346|gb|ABV27245.1| peptide chain release factor 1 [Candidatus Chloracidobacterium
           thermophilum]
          Length = 357

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 177/346 (51%), Gaps = 8/346 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      ++   L  +  DP +  +      L ++   L   +   +E Q    +   
Sbjct: 1   MFDKLKALEEKYEALTAQLSDPEVVADAARYAKLAKQHSELTEVVEKFREYQTIEANLAS 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGG 127
             EL  E +D  ++    + +  ++ +      + E LL      D  +  LE+ AG GG
Sbjct: 61  ARELLNEAEDAEMVALAREEIALLEKQRAQCQLELEQLLTPKDPNDRKNVLLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY R+AE+R ++ + L+    E  G+K   +LI+G   Y  LK E GV
Sbjct: 121 NEASLFAGELLRMYLRYAERRGWRVQILDESLSEVGGLKEGIVLIEGTGVYSRLKHESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++IEI   D RIDT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPVTESAGRIHTSTVTVAVLPEA-EEVDIEIDPKDVRIDTFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVR+TH+PTG+VV  Q E+SQ KN+ +A+ +LRA+L ELE QK+ E IA    +     
Sbjct: 240 SAVRLTHLPTGLVVSIQDEKSQIKNREKAFRILRARLLELERQKQHEAIAGERRAQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y  +    V D R  +       ++DG+LD  +   + 
Sbjct: 300 ERSEKIRTYNFKE-NRVTDHRIGLTLHQLDTIMDGELDGLIDPLIT 344


>gi|86132182|ref|ZP_01050777.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
 gi|85817101|gb|EAQ38284.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
          Length = 316

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 146/308 (47%), Positives = 210/308 (68%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +     ++  +E Q  + D  +L E A E +     +      ++    +E  +F 
Sbjct: 1   MKTLRSKKKWVTDYEEAQTFVEDLEVLYEFAKEGEAPE--ENVQARYEKAASFIEDIEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D     L++ AGAGGTES DWA+ML+RMY  +AEK+ +K + L   +G+ AGI
Sbjct: 59  NMLSEEGDELSCVLQITAGAGGTESCDWASMLMRMYLMYAEKQGWKVKELNFQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ +L I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIE++ 
Sbjct: 119 KTVSLEIEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIELNP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++TH PTG+ + C   RSQH N+A+A  MLR++LY
Sbjct: 179 ADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+K+ E  N  E+ K  I WG QIR+YVL PY++VKD+RT +E  +   VLDG++D 
Sbjct: 239 ELELRKQMEARNAIEADKKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDL 298

Query: 346 FMKATLAI 353
           F+K  L +
Sbjct: 299 FLKGYLMM 306


>gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 322

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 163/310 (52%), Positives = 212/310 (68%), Gaps = 2/310 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++R+ L+ A++   +I+    D   + ELA E +   +  +   +L+     +E  +  
Sbjct: 1   MQDRKRLEEAVANDDQIRALTDDLDTMFELAREGE--PVQADIERDLKPYSELLERLETA 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D+  A + +H GAGGTESQDWA MLLRMY RWAE+ KF T   +  +GE AGI
Sbjct: 59  MLLSGENDARSAIVTIHPGAGGTESQDWAEMLLRMYLRWAEREKFATVITDRLEGEGAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T  + G NAYG L+ E GVHRLVRISP+D+N+RRHTSF+S++V+P VDD I+I+I +
Sbjct: 119 KSVTFEVNGENAYGLLQSEIGVHRLVRISPFDANARRHTSFASVFVFPQVDDEIKIDIQD 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RASGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQHKN+A A   LRA LY
Sbjct: 179 KDLRIDTFRASGAGGQHVNMTDSAVRITHFPTGIVVQCQNERSQHKNRATAMKQLRACLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+K+       E SK EI +G QIR+YVL PY++VKDLR+ +       VL+G LD 
Sbjct: 239 EHELEKKRAETRETEDSKLEINFGSQIRNYVLAPYRLVKDLRSKLALGDVDRVLEGGLDP 298

Query: 346 FMKATLAIKK 355
            + + L  +K
Sbjct: 299 LIHSYLVWRK 308


>gi|311070220|ref|YP_003975143.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
 gi|310870737|gb|ADP34212.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
          Length = 356

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   +  +D   +L D
Sbjct: 1   MLDRLKSIEERYERLNELLSDPEVVNDPNKLREYSKEQSDISETVEVYRRYRDASEQLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    LQ     + +  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEISELQDETEAMTDQLKLLLVPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K   ++I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEIMEASVTGTGGYKEIIIMINGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEA-EEVEVDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQQEAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+F+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEFVDALIMEDQ 347


>gi|212711979|ref|ZP_03320107.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
 gi|212685501|gb|EEB45029.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
          Length = 360

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +        +  + D++   ++
Sbjct: 9   LEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLTDVAKCFTAWRT-VQDDIETAQM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  + ++E+ AGAGG E+ 
Sbjct: 68  LL--DDPEMKEMAQEELKEAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  +I + P + ++   EIS +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTIAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR    A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRHAAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPII 345


>gi|325283910|ref|YP_004256451.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
 gi|324315719|gb|ADY26834.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
          Length = 365

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 148/354 (41%), Positives = 216/354 (61%), Gaps = 5/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L    D     +RL+ L+    DP LW +   A+ + +E   +   +   + 
Sbjct: 3   ELQEKLASLREYLDIPGKERRLNELDHFLADPELWNDQNRARSITQEATSVRGVVEKYQG 62

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L     +LELA  ED+  +L E    +++    V+    E+L + +     A + V
Sbjct: 63  LKSDLDGLAEMLELAESEDEREMLLEEQGGIEQ---RVDELYRETLFTMKHADTPAIIRV 119

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+QDWA ML RMY RWAE+R ++ + L+   G++AG +S   +I+G  AYG +
Sbjct: 120 KGGAGGTEAQDWAGMLARMYMRWAERRGYRVDILDEQPGDQAGYQSIEFIIRGEKAYGMM 179

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
             E GVHRLVR+SP+DSN+RR TSF+S+ V P   ++ I+I I +SD R D +R+ G+GG
Sbjct: 180 SAEHGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEIDIHIPDSDLRRDVFRSQGSGG 239

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KREE A    
Sbjct: 240 QGVNTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMRKREEEALAAR 299

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             ++ + WG Q+RSYVL   Q +KD R+ + + +P DVLDGDLDD M A L  K
Sbjct: 300 GQQSSVEWGSQMRSYVL-DKQYIKDHRSGLMQHNPDDVLDGDLDDLMWAGLEWK 352


>gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
 gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
          Length = 357

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 116/349 (33%), Positives = 183/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   L  +  +P +  +    + LM+E+ +L   +   KE ++       
Sbjct: 1   MFDKLEDLLIRFEELLNELNEPGVASDPAHFQKLMKEQGNLQPIVDAYKEYKECKKTVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +   E D  + +   + L   K  +   + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLDGESDEEMREMLKEELNTAKDRIAELETELKILLLPKDPNDDKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + R+Y ++AEKR+++ E L   +    G+K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEMYRLYVKYAEKRRWRVELLNADEIGIGGMKEVNFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAVMPEA-EEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+TH PTG+VV  Q E+SQ +NKA+A+ +LRAKLY++E QK  +  A +  S     
Sbjct: 240 SAVRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRAKLYDIEQQKAHDAEAQLRRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       ++DGD+D+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLYKLDSIMDGDIDELLDSLIAADQ 347


>gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 291

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 139/283 (49%), Positives = 192/283 (67%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++EL   E D  +LQE    + ++  +++  + + LLSG  DS  A L ++AGAGGT++Q
Sbjct: 1   MVELLELEADEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML+RMYTRWAE   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 61  DWAFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D+S+ +EI E D  I T RA G GGQ+VN  ++AVR
Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEITTSRAGGKGGQNVNKVETAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           I HIPTGV V+C +ERSQ +NK +A   L+AKL  +  ++R +          E  WG Q
Sbjct: 181 IVHIPTGVAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+YV  PYQ+VKDLRTN+E T+  DV++GDLD+F++A L  +
Sbjct: 241 IRNYVFHPYQIVKDLRTNLETTAIGDVMNGDLDNFIQAYLRQE 283


>gi|187925494|ref|YP_001897136.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
 gi|238689472|sp|B2SZ27|RF1_BURPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187716688|gb|ACD17912.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
          Length = 360

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVDHYALWRQAMNDATTAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D ++  +  +E    + + +L      D  + +LE+ AG GG ES 
Sbjct: 69  LA---DASMRDFAEDEIRAARERMEKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSH--EQQAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVS 346


>gi|282856730|ref|ZP_06265994.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
 gi|282585426|gb|EFB90730.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
          Length = 252

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 151/252 (59%), Positives = 184/252 (73%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              LLSG  D   A L VHAG+GG +SQDWA ML RMY RW E+R+FKT+ L+    EEA
Sbjct: 1   MALLLSGPYDHCSAILSVHAGSGGLDSQDWAEMLYRMYLRWCEERRFKTKLLDYQHDEEA 60

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GIKSATLLI+G  AYG+L+ E GVHRLVRISP+D+N RRHTSF+S+ V P + D +++EI
Sbjct: 61  GIKSATLLIQGETAYGYLRSEIGVHRLVRISPFDTNKRRHTSFASVDVSPQLPDDVDVEI 120

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +  D RIDTYR+SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH NKA A ++L++K
Sbjct: 121 APEDLRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVSCQNERSQHMNKATAMSVLKSK 180

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           LY+ EL++R+   N     K E  WG QIRSYVLQPY +VKD RT  E  +   VLDG L
Sbjct: 181 LYQRELEQRQAEMNALAGEKKESTWGSQIRSYVLQPYTLVKDHRTGEETGNVGGVLDGGL 240

Query: 344 DDFMKATLAIKK 355
           D F+ A L   +
Sbjct: 241 DPFILAYLRWAR 252


>gi|77457286|ref|YP_346791.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf0-1]
 gi|77381289|gb|ABA72802.1| putative Peptide chain release factor 2 (RF-2) protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 280

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 160/278 (57%), Positives = 208/278 (74%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+EE+D   + +  + LQ ++  +   +F  + S E D N+AYL++ AG+GGTE+QDWA
Sbjct: 1   MAVEENDEGAVNDVVEVLQGLEESLSKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           N+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR S
Sbjct: 61  NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IGWG QIRS
Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRTNIE++    VLDGD+D++++A+L 
Sbjct: 241 YVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 277


>gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4]
 gi|166223537|sp|A4JB50|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           vietnamiensis G4]
          Length = 360

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSVRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRNDEAAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E   + +     +E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEEAIRSARERMTRLEGELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVS 346


>gi|241664381|ref|YP_002982741.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
 gi|240866408|gb|ACS64069.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
          Length = 360

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 181/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKRAEEDIATAQEL 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + D  +    E     +R++      Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  AADPDMKAFGEDELRAARERMESLEGELQRLLLPKNPNDHRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGDLD+ + A  A
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELVGALAA 346


>gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
 gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
          Length = 356

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 123/348 (35%), Positives = 187/348 (53%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  K  DP +     E   L +E   L+  ++  +E ++ L       EL
Sbjct: 5   LEIIEKKYDELTKKIADPEIIARQEEWIGLTKEHASLEEIVTNFREYKEVLKQLEENSEL 64

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + Q     L+ ++ +     E  +   L     D  +  +E+ AG GG E+
Sbjct: 65  LEDAAGDIEMEQLIKSELEALEEKKSKLQEQLRILLLPQDPNDDRNVIMEIRAGTGGDEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AEK+ +K E ++ +  E  G K     I G  AY  LK E GVHR+
Sbjct: 125 ALFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++IEI+  D RID YRASG GGQ VNTTDSAV
Sbjct: 185 QRVPSTEAGGRIHTSAATVAVLPEAHE-VDIEINPDDLRIDIYRASGHGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV CQ ERSQ KNK +A  +LRA+L  LE  + E+   I ++ ++++G G 
Sbjct: 244 RITHIPTGLVVTCQDERSQLKNKDKAMKVLRARL--LEKVQEEQEREIAQNRRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N+     ++VL G+LD+ + A +A  +
Sbjct: 302 RSERIRTYNF-PQGRITDHRINLTTHQLTNVLQGELDELIDALVAEDQ 348


>gi|300726271|ref|ZP_07059724.1| peptide chain release factor 2 [Prevotella bryantii B14]
 gi|299776468|gb|EFI73025.1| peptide chain release factor 2 [Prevotella bryantii B14]
          Length = 376

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 127/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W +   A+  M++ + +   +   KE++ 
Sbjct: 12  ERTEALYRYLNIDQKKVEFEEEQLRTQAPDFWDDPKYAQEQMKKVKEIQKWLDGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  E   +E      +E  D+  +    +E  + +++L  E DS DA L++++G
Sbjct: 72  YADELQLAFEFYKDE--MVTEEEVDDDYAKAIKAIENLELKNMLRQEEDSMDAVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA+ML+RMY RW E   +  +   + DG+EAGIKS  + I+ G  AYG+LK 
Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYSVKITNMQDGDEAGIKSVEMTIEGGEFAYGFLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IEI +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEIYVDPAKVSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L++++  
Sbjct: 250 NKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKRKQAE 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +    V+DG LD+F+K+ L 
Sbjct: 310 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKLDEFIKSYLM 365


>gi|213969083|ref|ZP_03397222.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
 gi|213926081|gb|EEB59637.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
          Length = 280

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 160/278 (57%), Positives = 211/278 (75%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE+QDWA
Sbjct: 1   MSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           N+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR S
Sbjct: 61  NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++IGWG QIRS
Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRTNIE++    VLDGD+D+++ A+L 
Sbjct: 241 YVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASLK 277


>gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
          Length = 375

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 182/347 (52%), Gaps = 10/347 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D       RL  +      P    N+   + L +E   L   +   ++ +    D  
Sbjct: 21  SILDKLQTLADRLEEVTALLGSPEATANMDTYRKLNQEHAELTPIVETYQQYRQAESDLT 80

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGT 128
              E+  + D      E      +IK+E    + + LL      D  + ++E+ AG GG 
Sbjct: 81  DAQEMLSDPDMKEFAAEEI-EATKIKIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGD 139

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY+R+AE+ +++TE +   + +  G K   + + G  AY  LK E G H
Sbjct: 140 EAALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGH 199

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P  D+  EI+++ +D RIDT+RASGAGGQH+N TDS
Sbjct: 200 RVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDS 259

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG 
Sbjct: 260 AIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQ--KREAQAKEAAERKSLIGS 317

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   V D R N+       V+DGD+++   A +A
Sbjct: 318 GDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITSALIA 363


>gi|316984833|gb|EFV63790.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325140851|gb|EGC63361.1| peptide chain release factor 1 [Neisseria meningitidis CU385]
 gi|325144920|gb|EGC67204.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013]
          Length = 385

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 36  LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 95

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 96  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 155

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 156 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 215

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 216 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 275

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 276 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 333

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 334 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 373


>gi|157694096|ref|YP_001488558.1| peptide chain release factor 1 [Bacillus pumilus SAFR-032]
 gi|166977360|sp|A8FID1|RF1_BACP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157682854|gb|ABV63998.1| peptide chain release factor RF1 [Bacillus pumilus SAFR-032]
          Length = 355

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +        
Sbjct: 1   MLDRLKSIEERYEKLNEYLSDPEVVNDPTKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60

Query: 72  LLELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  +     + +    +  +   +  +   +     D+ +  +EV   AGG
Sbjct: 61  AKAMLEDKLDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEMQGWKTEVMEASVTGTGGYKEIIFMISGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQREAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQ 347


>gi|89094907|ref|ZP_01167839.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
 gi|89080864|gb|EAR60104.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
          Length = 362

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 178/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     DP +  +  + +    E   L+  +   +       D     E+
Sbjct: 9   LEKLSDRYEELAALLSDPEVISDQEKFREYSMEYSELEPVVKAFEAYTQAQEDLEEA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + + D  + +   +    +K  +E      Q   L     DS + +LEV AG GG E+ 
Sbjct: 68  MMADSDPDMREMAKEEYPEVKARIESLEGELQILLLPKDPNDSRNVFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + ++ E +  ++GE  G K     I G N Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEVQGWRVEVVSANEGEHGGYKEIISRIVGTNVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ +   +D+S EIEI+++D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAIMAEMDESAEIEINKADLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           ITHIPTGVVV+CQ+ERSQHKN+A+A ++L ++L   E +++    A+  +S         
Sbjct: 248 ITHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAEEERQAAELASTRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+      +V+ G+L   ++  
Sbjct: 308 RIRTYNY-PQGRVTDHRINLTLYKLQEVISGELQHVVEPL 346


>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 356

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 112/339 (33%), Positives = 174/339 (51%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  LN          ++   + + RE   +   +   +  +    D      +
Sbjct: 5   LATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKEAHAM 64

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  +  QE  +    R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++++K E +   + E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ  RSQH NKAQA  +L A++   ++   E+ + I    ++ IG G    +
Sbjct: 245 FPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVN--EQQSKIASERRSLIGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       + +GD+D+ + A 
Sbjct: 303 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINAL 340


>gi|77460969|ref|YP_350476.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf0-1]
 gi|119361582|sp|Q3K6W9|RF1_PSEPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77384972|gb|ABA76485.1| peptide chain release factor RF-1 [Pseudomonas fluorescens Pf0-1]
          Length = 360

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 176/342 (51%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   L+  +   K++     D      L
Sbjct: 9   LDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAELEPVVQGYKKLLGVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K  +   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     I+G N YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITHIPTG VV+CQ+ERSQHKN+A+A   L AKL + +       IA+  +          
Sbjct: 248 ITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y       V D R N+   S  ++L G ++  ++  LA
Sbjct: 308 RIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLA 348


>gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis]
          Length = 426

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 132/354 (37%), Positives = 209/354 (59%), Gaps = 4/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++     + D  +  +R++ L        LW+    A  ++++   L   ++ ++ 
Sbjct: 51  ELQERIQDAVKVADLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLTALREEVAALER 110

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNL---QRIKLEVEYKQFESLLSGEADSNDAY 118
              +L D  + +EL   ED+       ++       +   +E  +   LL G  D   A 
Sbjct: 111 FCGQLEDLGVAMELLEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRLLGGPYDDRGAV 170

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L + AGAGGT++QDWA ML RMY RWAEK+  +T  ++   GEEAGIKS  + + G  AY
Sbjct: 171 LTIQAGAGGTDAQDWAEMLERMYLRWAEKQGHRTRVVDRQQGEEAGIKSVEIEVDGRYAY 230

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASG 237
           G+L GE+G HRLVR SP+++ + R TSF+++ V P++ + + E+E+ ESD  I T R++G
Sbjct: 231 GYLHGEKGTHRLVRQSPFNAKAARQTSFAAVEVMPMLGELVDEVELPESDLEITTMRSAG 290

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQ+VN  ++AVRI H+PTG+ V+CQ ERSQ +NK+ A  ML+AKL  +  +++ +   
Sbjct: 291 AGGQNVNKVETAVRIKHLPTGIAVKCQMERSQAQNKSIALGMLKAKLLVVAQEQQLQEVA 350

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                  +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L  FM+A L
Sbjct: 351 EIRGDLVKAEWGQQIRNYVFHPYKLVKDVRTGQETSDVAGVMDGELQPFMQAYL 404


>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
 gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
          Length = 360

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 174/339 (51%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  LN          ++   + + RE   +   +   +  +    D      +
Sbjct: 9   LATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKEAHAM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  +  QE  +    R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++++K E +   + E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ IS +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ  RSQH NKAQA  +L A++   ++   E+ + I    ++ IG G    +
Sbjct: 249 FPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVN--EQQSKIASERRSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       + +GD+D+ + A 
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINAL 344


>gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
 gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
          Length = 363

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 189/349 (54%), Gaps = 9/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D      QR   +  +  DP +  +      L RER  L+  ++  ++++D +   +
Sbjct: 7   SVLDKLAELEQRFDEVERQLADPDVATDPQRVAQLARERAELEEIVALYRQLKD-IDRQV 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126
              E  LE +D  +++  ++ + R++   E  Y++    L      D  D  +E+ AG G
Sbjct: 66  AQAEELLEAEDPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE++ +K E L     E  G K     ++G  AY   K E G
Sbjct: 126 GEEAALFAADLFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S+ R HTS +++ V P   D +E+ I E D RI+ +R+SG GGQ VNTT
Sbjct: 186 VHRVQRVPITESSGRIHTSTATVAVLPEA-DEVEVHIDEDDLRIEVFRSSGHGGQSVNTT 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQ KN+ +A  +LRA+LYEL+ +K EE        +   
Sbjct: 245 DSAVRITHLPTGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEEERTGLRRQQVGT 304

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G    +IR+Y   P   V D R  +   +   VLDG++D F++   A++
Sbjct: 305 GERAEKIRTYNF-PQDRVTDHRLKLTVNNLPAVLDGEIDIFIQELQALE 352


>gi|167587636|ref|ZP_02380024.1| peptide chain release factor 1 [Burkholderia ubonensis Bu]
          Length = 360

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   LD  +      +  L D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELDPVVGQYALWRQSLSDEAAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D ++  +  +   + E     L     D  + +LE+ AG GG ES 
Sbjct: 69  L---GDASMRDFAEDEIRSARDRMVQLEVELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIAALVS 346


>gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
 gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|61214592|sp|Q62DF3|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223532|sp|A3MFT4|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223533|sp|A2RYL2|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223534|sp|A1UWC9|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
          Length = 360

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       + E      R+       Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|164688895|ref|ZP_02212923.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
 gi|164602099|gb|EDQ95564.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
          Length = 354

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 125/344 (36%), Positives = 185/344 (53%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L  K  D  +  +    +  M+E   L+  +   +E ++ + +     E+  E
Sbjct: 8   LEDKYKELTEKISDIEVINDQKTWQKYMKEHADLEPIVMKYREYKEVVDNIKESKEILEE 67

Query: 79  EDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +     L  ++  VE      +   L     D  +  +E+  GAGG E+  +A
Sbjct: 68  ESDEELRELAKMELSDLESRVEPIEDELKILLLPKDPNDEKNVIVEIRGGAGGDEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+R++KTE L   D    G K  + +IKG  AY  LK E GVHR+ RI 
Sbjct: 128 GDLFRMYSRYAERRRWKTELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P V + +EIEI+ +D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 188 STESGGRIHTSTATVAVLPEV-EDVEIEINPNDLRIDVFRASGNGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV CQ E+SQ KNK +A  +L+A+LY+  L   E+  +I    ++++G G    +
Sbjct: 247 LPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKAL--AEQHDDIAAERRSQVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+        LDGDLD+ + A +   +
Sbjct: 305 IRTYNF-PQGRVSDHRINLTLYKLESFLDGDLDEMIDALITEDQ 347


>gi|255004320|ref|ZP_05279121.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Virginia]
          Length = 255

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 153/249 (61%), Positives = 188/249 (75%), Gaps = 1/249 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEALEIHDGEEAGI 165
           + SGEAD +  +L +  GAGGTES DWA MLLRMY RWA     F TE ++  DGE AG+
Sbjct: 1   MFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWAGTFHGFTTEIVDKIDGEAAGL 60

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I G  AYGW K E GVHRLVRISP+DS+SRRHTSF+S+ V P+ DD I+IEI E
Sbjct: 61  KSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHTSFASVEVSPIADDKIDIEILE 120

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ  RSQH+N+A+A+++LR++LY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQTSRSQHQNRAEAYSLLRSRLY 180

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQ++E+       S+ +IGWG QIRSYV+ PY+MVKDLRT  E      VLDGDLD 
Sbjct: 181 EMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVKDLRTGHETGDVDAVLDGDLDK 240

Query: 346 FMKATLAIK 354
           F+ A L  K
Sbjct: 241 FIAAALTYK 249


>gi|218682869|ref|ZP_03530470.1| peptide chain release factor 2 [Rhizobium etli CIAT 894]
          Length = 267

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 198/250 (79%), Positives = 228/250 (91%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E++LSGEA     YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAG
Sbjct: 5   EAMLSGEARQQRHYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAG 64

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+
Sbjct: 65  IKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEIN 124

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++
Sbjct: 125 ESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARM 184

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL+
Sbjct: 185 YEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLN 244

Query: 345 DFMKATLAIK 354
           +FM+A LA +
Sbjct: 245 EFMEAALAHR 254


>gi|315607246|ref|ZP_07882247.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
 gi|315251063|gb|EFU31051.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
          Length = 373

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 124/357 (34%), Positives = 208/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    D D           +T+ P  W++   A+  M++ + ++  +   KE++ 
Sbjct: 12  ERAEALHRYLDIDKKKVEFEEEQLRTQAPDFWEDPARAQEQMKKVKSIEKWLDGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     DD    +E   +  +    +E  + +++L  + D  +A +++++G
Sbjct: 72  YADELQLAFDFFH--DDMVSEEEVDADYAKAIKAIEALELKNMLRQKEDPMEAVIKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA+ML+RMY RW E   ++     + +G+EAGIKS T+ ++ G  AYG+LK 
Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN +      V+DG +D+F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDEFIKAYLM 365


>gi|330997843|ref|ZP_08321678.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329569731|gb|EGG51496.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 370

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 131/358 (36%), Positives = 204/358 (56%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N   ++     +T+ P  W +   A+  M++ + L   I   KE+
Sbjct: 10  IKTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   EE      +E      R    +E  +  ++L  E D  DA L+++
Sbjct: 70  KTLCDELELAFDFYKEE--MVTEEEVDGLYSRTVDALEDLELRNMLRQEEDPMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K       DG+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKCTISNYQDGDEAGIKTVTMQIEGEFAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  S    D +R+ GAGGQ+
Sbjct: 188 SENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +            ++++  + R Q +N+  A  +L+++LY+  LQKR+ 
Sbjct: 248 VNKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG LD F+K+ L 
Sbjct: 308 KQAEIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYLM 364


>gi|294507807|ref|YP_003571865.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
 gi|294344135|emb|CBH24913.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
          Length = 349

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 149/335 (44%), Positives = 212/335 (63%), Gaps = 8/335 (2%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             LN +  DP  W +   A+ + +     +  I   ++++++  D   L +L  EE+   
Sbjct: 4   EELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWEDVKEQAEDIETL-QLLSEEEGED 62

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +  E     +R++ +++  + ESLL    D  DA +E++ GAGGTESQDWA MLLRMY R
Sbjct: 63  MSDEIDAEARRLEQKLDRLELESLLDDPDDERDAIVEINPGAGGTESQDWAEMLLRMYMR 122

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + +  E +    GEEAGIKSATL ++G +AYG LK E GVHRLVRISP+D++SRRH
Sbjct: 123 WAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRLKSETGVHRLVRISPFDADSRRH 182

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-------P 256
           TSF+S++VYP VDDSI +++SE +  + T+R+ G GGQHVN  ++ VR+           
Sbjct: 183 TSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQHVNKVETGVRLIWTGTLSNGEE 242

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           T V   C QERSQH+N+ +A  ML++++Y+ E + +EE     ESSK  I WG QIRSYV
Sbjct: 243 TTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEEEKERLESSKKSIEWGSQIRSYV 302

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           L PY+MV D RT+ ++     VL+G LD F+KA L
Sbjct: 303 LHPYKMVNDHRTDTKRNDAEAVLEGGLDPFIKAYL 337


>gi|284039842|ref|YP_003389772.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
 gi|283819135|gb|ADB40973.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
          Length = 357

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 175/342 (51%), Gaps = 8/342 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R + +  +   P    +      L +E + L+  +   +  Q  L +   
Sbjct: 1   MLDQLEAIRERFNEVAQQIVQPEAVSDQKRFMKLSKEYKDLEKIVVQYQAYQQLLEEIDN 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
             ++   E D    +     L  +    E  +       +     DS +  LE+  G GG
Sbjct: 61  AKKIIATEKDEDFREMAKGELDELLPRRETLEETLKEMLMPKDPNDSKNVILEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY R+ EK  ++   ++  +G   G K     I+G + YG LK E GV
Sbjct: 121 DEAAIFAGDIFRMYQRFCEKMGWRMSLVDFTEGTSGGYKEIITEIEGEDVYGKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++EI+ +D R DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATETQGRIHTSAASVAVLPEA-EEVDVEINMNDIRKDTFCSSGAGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVR+THIPTG+VVQCQ ERSQ KN  +A  +LR++LYE+ELQK  + IA+  ++     
Sbjct: 240 SAVRLTHIPTGLVVQCQDERSQLKNFDKALTVLRSRLYEIELQKHNDAIASQRKTMVGSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
               +IR+Y   P   V D R  +   +   V+DG + +F++
Sbjct: 300 DRSDKIRTYNY-PQSRVTDHRIGLTVYNLPSVMDGGIGEFIE 340


>gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 356

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 182/343 (53%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   Q+   + T   DP ++ N  + + L +    L   +S  +E +  + +     EL
Sbjct: 5   LDELEQQYMQIETDLSDPEVFSNQEKYRKLSKSHSELGPIVSTYREYRRIVSEMEENREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  I +     L+ ++ E     E  + + + S   D  +  LE+ AG GG E+ 
Sbjct: 65  ARDR-DPEIRELAQAELETLQEEKDRLEEDLKIQLVPSDPLDDKNIILEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+R +K E L + +    GIK     I G   Y  LK E GVHR+ 
Sbjct: 124 LFAADLFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + +++ I  +D R+D +RASG GGQ VNTTDSAVR
Sbjct: 184 RVPETESQGRVHTSAVTVAILPEA-EEVDVNIEPNDLRVDVFRASGPGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQHKN+A+A  +LR++L  L++ + E+     ++ + ++G G  
Sbjct: 243 ITHIPTGLVVSCQDEKSQHKNRAKALKVLRSRL--LQIMEEEQKREYDDNRRAQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   +   V+ G LD  +   +
Sbjct: 301 SERIRTYNF-PQSRVTDHRINLTLYNLESVMQGHLDGIIDPLV 342


>gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400]
 gi|119361518|sp|Q13TU2|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           xenovorans LB400]
          Length = 360

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D S+     + ++  +  ++    + + +L      D  + +LE+ AG GG ES 
Sbjct: 69  LA---DASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSH--EQQAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVS 346


>gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           18P13]
          Length = 361

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             Q+   ++ +  DP +  ++     LM+E ++L+  +   +  +          EL   
Sbjct: 8   MEQKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQEARELLDA 67

Query: 79  -EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
             +D  + +      +  K ++    E  +   L     D  +  +E+  GAGG E+  +
Sbjct: 68  GSEDPELREMAQAEFETEKEQLAEYAEQLKILLLPKDPNDDRNVIIEIRGGAGGEEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           AN L RMYT +AE R +K E L  +  E  G K  +  I G  AY  LK E GVHR+ R+
Sbjct: 128 ANSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V     D +E+ I+ +D +ID +R+SGAGGQH+N T+SAVRIT
Sbjct: 188 PETESQGRIHTSTVTVAVLVEA-DEVELAINPTDLKIDVFRSSGAGGQHINKTESAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ ERSQ KNK +A  +LR++LY  E  ++E+   I    + ++G G    
Sbjct: 247 HLPTGLVVECQDERSQFKNKDRAMMILRSRLY--ERMQQEQQDKIASQRRMQVGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +      DV++G+LD+ + A     +
Sbjct: 305 RIRTYNF-PQGRLTDHRIGLTIYRLEDVMNGNLDEVLDALATADQ 348


>gi|94984277|ref|YP_603641.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
 gi|94554558|gb|ABF44472.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
          Length = 380

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 140/326 (42%), Positives = 200/326 (61%), Gaps = 6/326 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW N   A+ + +E   L   +   + +Q       
Sbjct: 28  GSTFDIPGKTRRLNELDRELSDPELWNNPSRARQVTQEAGSLRRIVDGYRTLQSDANSLN 87

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LE+A +E+        ++    I+  V+    E+L + +     A + V  GAGGTE+
Sbjct: 88  EMLEMASDEE----RALLAEEQDTIQARVDELYRETLFTMKHADAPAIVRVKGGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   GE+AG +S   +I+G  A+G +  E GVHRL
Sbjct: 144 QDWAGMLARMYMRWAERRGYKVDVLDEQPGEQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+D+N+RR TSF+S+ V P V +  I+I I +SD R+D YR+ GAGGQ VNTTDSA
Sbjct: 204 VRVSPFDANNRRQTSFASVDVVPEVPEEQIDIVIPDSDVRVDVYRSQGAGGQGVNTTDSA 263

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG++V  Q  RSQ KN+  A+ +L+ +LY+LE++KREE        + +I WG
Sbjct: 264 VRVTHLPTGIIVAIQVTRSQIKNREMAFQILKQRLYDLEMRKREEEEAKARGEQKKIEWG 323

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSP 335
            QIRSYVL   Q VKD RT + K +P
Sbjct: 324 SQIRSYVL-DKQYVKDHRTGLMKHNP 348


>gi|325291372|ref|YP_004267553.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966773|gb|ADY57552.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 356

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +   ++   +     +P ++ +    +   + +  +   +   +E ++   +L D   L
Sbjct: 5   LEEIEKKYDEITELLSNPEIFSDQAAYQKNAKAQAAIAEIVEGFREYKEIFRQLKDAQAL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +     Q   D LQ  K E  E  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LEEELDSEMREFAQSEIDELQNRKEEYEEKLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY+R+AE++ +KTE L     +  G K    +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLYKMYSRYAEEQGWKTEMLSASYTDIGGFKEIIFMVEGRGAYSMLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++IEI+ ++ RID + +SG GGQ VNTT SAVR
Sbjct: 185 RIPSTESGGRIHTSTATVAVLPEA-EDVDIEINPNEIRIDIFCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQHKNK +A  +LRA+L  LE  ++E +  I +  K+++G G  
Sbjct: 244 VTHIPTGIVVSCQDEKSQHKNKDKALKVLRARL--LEKAQQEAMGEIAQERKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +      ++L GD+ + + A +A  +
Sbjct: 302 SERIRTYNF-PQGRVSDHRIGLTLHKLENILLGDIQEIIDALIAKDQ 347


>gi|308050535|ref|YP_003914101.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
 gi|307632725|gb|ADN77027.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
          Length = 360

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 177/338 (52%), Gaps = 3/338 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  +    + L +E   L+  ++     Q    D     E+
Sbjct: 9   LEGLQERYEEVQALLGEPDVIADQDRFRQLSKEYSQLEAVVNAFLAYQQNQEDIATATEM 68

Query: 76  ALEEDD-CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E ++   + +   +  Q   L     D   A++E+ AGAGG E+  +A
Sbjct: 69  LADPEMKEMAEEELAEARAQTEALEQELQILLLPKDPNDDRSAFVEIRAGAGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE++ +  E +   DGE  G K       G + YG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAEQKGWSVELMSASDGEHGGYKEVIAKFSGDSVYGELKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++  IEI+ +D ++DT+RASGAGGQHVN TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVVVMPEVPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG VV+CQ ERSQHKN+A+A  +L A+L   E +KR+        S    G    +IR
Sbjct: 249 LPTGTVVECQDERSQHKNRAKAMAVLSARLQAAEDEKRKAEETSTRRSLVASGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R N+     ++V++G+L   M+  L
Sbjct: 309 TYNY-PQGRVSDHRINLTLYRLTEVMEGELSALMQPIL 345


>gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
 gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
          Length = 360

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N  +RL  ++       +  N+   + L RE   +   +   +  +    D      +
Sbjct: 9   LANLSERLDEIDRLMSSEGITDNMDNYRKLTREHAEITPIVEQYRAFEQTEADINEAQTM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  +  QE  +    +++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LNDPEMKAFAQEEIEAGKAKLEAIEAALQTLLLPKDPNDDKNIFLEIRAGTGGDESGLFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +  ++GE  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAERQGWKVEVMSANEGEMGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D+  ++ I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 DTETQGRIHTSACTVAILPEADEVSDVVINPADVRIDTFRASGAGGQHINKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ+ RSQH NKAQA+ +L A++   ++   E+ + I    K+ IG G    +
Sbjct: 249 APTGIVVECQEGRSQHANKAQAFAVLAARIKAKQVD--EQQSKIASERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       + +GD+D+ + A  A
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELIGALAA 346


>gi|152977515|ref|YP_001377032.1| peptide chain release factor 1 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189039958|sp|A7GV79|RF1_BACCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152026267|gb|ABS24037.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98]
          Length = 355

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 118/351 (33%), Positives = 188/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVEDRYEKLNELLSDPAVINDSNKLREYSKEQSDIQETVEVYREYKDVREQLQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E   +L+  + E+ +  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSDLEVQEKELSDRLKILLVPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KT+ +E    E  G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEMQGWKTDIIEASYTELGGYKEIIFMINGKGAYAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFRQEAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|282880596|ref|ZP_06289302.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
 gi|281305491|gb|EFA97545.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
          Length = 374

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 129/357 (36%), Positives = 207/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W++   A+  M + + ++  +   ++++ 
Sbjct: 12  ERTQALHHYLNIDQKKIEFEEEQLRTQAPDFWEDPQRAQEQMIKVKGIEKWLKGYEQVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  E     DD    +E   +  +    +E  + +++L  + D  D  +++++G
Sbjct: 72  MADELQLAYEFYR--DDMVTEEELDHDYAKAIAAIEDLELKNMLRQKEDPMDCVMKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKG 183
           AGGTESQDWA ML+RMY RWAE   +K    +I DGEEAGIKS T+ I+G   AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHDYKCTVSDIQDGEEAGIKSVTMKIEGNEYAYGFLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPACVSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYQYHDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + T    V+DG +DDF+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTTDVDGVMDGKIDDFIKAYLM 365


>gi|239828604|ref|YP_002951228.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
 gi|259585224|sp|C5D9N4|RF1_GEOSW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239808897|gb|ACS25962.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
          Length = 358

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +   +R   LN    DP +  +  + +   +E+  L   +   +E +    +L +   +
Sbjct: 5   LEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLSETVQTYREYKSVRKQLDEAKAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E  D L++ + E+    +   L     D  +  +E+ A AGG E+ 
Sbjct: 65  LEEKLDPEMREMVKEEIDELEQKEEELVNKLKILLLPKDPNDEKNVIMEIRAAAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G HR+ 
Sbjct: 125 LFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTIIGKGAYSKLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++   P + + IE+EI+E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVACLPEM-EEIEVEINEKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G G  
Sbjct: 244 LTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYD--KYQQEARAEYDQTRKQAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VLDG+LD+ ++A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGNLDEIIEALILDDQ 347


>gi|158321600|ref|YP_001514107.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
 gi|166977358|sp|A8MJX9|RF1_ALKOO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158141799|gb|ABW20111.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
          Length = 357

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 116/352 (32%), Positives = 183/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      ++   L+ K  +P +  +  + K L++E   L+  +   +E +        
Sbjct: 1   MLDKLAFLEEKYEDLSEKISEPEIINDQPQWKKLVKEHSDLEEIVMKYREYKKTEQGLND 60

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
             E+  ++  D    +     +  ++ ++E  +       L     D  D  +E+ AGAG
Sbjct: 61  AKEILRDKTADEEFREMAKMEIAELEEKIEVLEGELKILLLPKDPNDDKDVIVEIRAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE   +K E +  +D    G K    +IKG  AY  LK E G
Sbjct: 121 GDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMIKGHGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   +S  R HTS  ++ V P   D ++ E+  +D R+D +R+SG GGQ VNTT
Sbjct: 181 VHRVQRIPSTESGGRIHTSTITVAVLPEA-DDVDFELDMNDIRVDVFRSSGNGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG VV CQ E+SQ KNK +A  +LRA+L  L++  +E+ A I +  K+++
Sbjct: 240 DSAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARL--LDVLIQEQQAEIAQDRKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R N+        L+GD+ + + A +   +
Sbjct: 298 GTGDRSERIRTYNF-PQGRITDHRINVTLYRLDSFLNGDIQEMIDALITTDQ 348


>gi|294675125|ref|YP_003575741.1| peptide chain release factor 2 [Prevotella ruminicola 23]
 gi|294472270|gb|ADE81659.1| peptide chain release factor 2 [Prevotella ruminicola 23]
          Length = 374

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 128/357 (35%), Positives = 210/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            + + L    + D         + +T+ P  W++   A+  M++ + +   +   KE++ 
Sbjct: 12  ERADALHRYLEIDKKKIEYEEEDLRTQAPDFWEDRKRAEEQMKKVKGIKKWLDGYKEVRT 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +   +E      +E  D   +    +E  + +++L  + D  +A L++++G
Sbjct: 72  LADELQLAFDFFKDE--MVTEEEVEDTYAKAIKAIEDLELKNMLRQKEDPMEAVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTE+QDWA+ML+RMY RWAE   +K     + DG+EAGIKS T+ ++ G  AYG+LK 
Sbjct: 130 AGGTEAQDWASMLMRMYMRWAEAHGYKVTISNLLDGDEAGIKSVTMQLEGGDYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +  T         ++++  + R Q KNK +A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYWYTDPDTGEEEEILIENTETRDQPKNKERAMTLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + T    V+DG +DDF+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMDGKIDDFIKAYLM 365


>gi|307131078|ref|YP_003883094.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
 gi|306528607|gb|ADM98537.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
          Length = 361

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     +  Q    D     EL
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQRWQQTQDDLATA-EL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     D L+  K       +  Q   L     D    +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMRDLAQDELKTAKAASEELEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +   DGE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVAGDGAYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIQPIV 345


>gi|167759398|ref|ZP_02431525.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
 gi|167662955|gb|EDS07085.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
          Length = 356

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 189/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  + ++ ++P++  +    + LM+E+  L   +   KE +        
Sbjct: 1   MFDKLEDLLIRLEEVLSELQEPNVANDQNRFRKLMKEQNELTPIVEAYKEYKACKQAIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L++  EE D  + +   + L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLQMLEEESDEEMRELAKEELNDSKARVEELEHELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E +E  +    G+K+ T +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRRWKVELVECEEIGIGGMKNVTFMINGKGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++I+I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EDVDIQIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QKR +  A   +S     
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDMECQKRHDAEAEARKSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + + A +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|119945323|ref|YP_943003.1| peptide chain release factor 1 [Psychromonas ingrahamii 37]
 gi|166223592|sp|A1SV89|RF1_PSYIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119863927|gb|ABM03404.1| bacterial peptide chain release factor 1 (bRF-1) [Psychromonas
           ingrahamii 37]
          Length = 363

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 183/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP    +  + + L +E   L+  +   K+ Q    D  +  E+
Sbjct: 9   LEVLVERYEEVQALLGDPGTISDQNKYRELTKEYAQLEVVVLSFKKYQSAQNDLAVA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++DD  + +   + ++  K  VE      Q   L     D  + YLE+ AGAGG E+ 
Sbjct: 68  MSDDDDPDMREMAKEEIKEAKKTVEKLAADLQILLLPKDPNDDRNCYLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE + ++ E +  +  E+ G K     I G  AYG +K E G HR+ 
Sbjct: 128 IFAGNLFRMYSKYAESKGWRVEVMNSNASEQGGYKELIAKIDGEGAYGIMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++  I I+ +D ++DT+RASGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVVVMPEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG VV+CQ +RSQHKN+AQA ++L+++L + E +K          S    G    
Sbjct: 248 LTHLPTGTVVECQDQRSQHKNRAQAMSVLQSRLQQAEDEKSHAEEQTIRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++VL+GDL+   +  L
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTVYRLNEVLEGDLNALHEPIL 347


>gi|170696251|ref|ZP_02887383.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
 gi|170138811|gb|EDT07007.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
          Length = 360

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 185/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEQYALWRQAMHDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D S+ +   + ++  +  +E    + + +L      D  + +LE+ AG GG ES 
Sbjct: 69  LT---DISMREFAEEEIRAARERMEQLGGELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSH--EQQAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELISALVS 346


>gi|329956010|ref|ZP_08296781.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
 gi|328524769|gb|EGF51823.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
          Length = 372

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 208/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KVMADELQLAFDFYKDE--LVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIEIAGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I ++    DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364


>gi|288927134|ref|ZP_06421019.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
 gi|288336096|gb|EFC74492.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
          Length = 373

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 124/357 (34%), Positives = 208/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    D D           +T+ P  W++   A+  M++ + ++  +   KE++ 
Sbjct: 12  ERAEALHRYLDIDKKKVEFEEEQLRTQAPDFWEDPTRAQEQMKKVKSIEKWLDGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     DD    +E   +  +    +E  + +++L  + D  +A +++++G
Sbjct: 72  YADELQLAFDFFH--DDMVSEEEVDADYAKAIKAIEALELKNMLRQKEDPMEAVIKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA+ML+RMY RW E   ++     + +G+EAGIKS T+ ++ G  AYG+LK 
Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN +      V+DG +D+F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDEFIKAYLM 365


>gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
 gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
          Length = 358

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 179/342 (52%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  + +    P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTSLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQQAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
             + +      E      ++K++    + + LL      D  + ++EV AG GG E+  +
Sbjct: 69  LSDPEMKDFAAEEI-EAAKVKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+
Sbjct: 128 AGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRIT
Sbjct: 188 PATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    
Sbjct: 248 HLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|296159488|ref|ZP_06842312.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
 gi|295890196|gb|EFG69990.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
          Length = 356

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 5   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAATAQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D S+     + ++  +  ++    + + +L      D  + +LE+ AG GG ES 
Sbjct: 65  LA---DASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ 
Sbjct: 122 LFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 182 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 242 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSH--EQQAKEAATRKSLIGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 300 SERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVS 342


>gi|292669720|ref|ZP_06603146.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
 gi|292648517|gb|EFF66489.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
          Length = 354

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72
            +    +   L     DP +  ++ + +   RE   L   +      Q  L    ++  L
Sbjct: 5   LNAVADKYRELEALLSDPAVMADMEKWQRYTREHAALTPIVEAYSAYQQALLTIEEDQGL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A  E    + +E ++  +R     +      L     D  +  +E+  G GG E+  
Sbjct: 65  LAEADAEMKAMLEEEIAEAEERRDQLAQELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ ++TE L  +  E  G K  + L+ G  AY  LK E G HR+ R
Sbjct: 125 FAASLFRMYARYAERQGWRTEILSSNPTEIGGFKEISFLVNGAGAYSRLKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RI
Sbjct: 185 IPVTESGGRIHTSAVTVAVLPEA-EDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VVQCQ E+SQ KN+ +A  +LRA+LY+    ++E+   +    ++++G G   
Sbjct: 244 THIPSGIVVQCQDEKSQLKNREKAMKVLRARLYD--RARQEQADAVAADRRSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       VLDG+LD+ +   +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELDEILAGLITADQ 346


>gi|225575054|ref|ZP_03783664.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037724|gb|EEG47970.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
          Length = 357

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 124/349 (35%), Positives = 196/349 (56%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +FD  ++ + R   + ++  +P +  N    + LMRE+  L   +   KE    Q  + D
Sbjct: 1   MFDKLEDLLIRFEEVLSELGEPGVADNQERFQKLMREQSELQPIVDTYKEYKENQQTIQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGG 127
           ++ +LE   +E+   +L+E   + +R   E+E   +   L     DS +  +E+ AGAGG
Sbjct: 61  SVSMLEEESDEEMREMLKEELSDAKRRVGELENELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE L +++    G K  T +I+G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMPEA-EEIDFHLDLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+ELQK+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELQKQHDAEAEARRSQVGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +        L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGTLNGDLDEVIDSLIAADQ 347


>gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217]
 gi|119361603|sp|Q12QR8|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           denitrificans OS217]
          Length = 361

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 111/338 (32%), Positives = 183/338 (54%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLAMLGDATVISDQERFRALSKEYSQLEDVVKSFKAFQQAQLDLASAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L+EDD  + +   + ++  K  +E  +       L     D  +A+LE+ AGAGG E+ 
Sbjct: 69  -LQEDDAEMREMAQEEMKAAKKVIEQLEDELQILLLPKDPNDDTNAFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+ E  K++ E + +++ +  G K   + + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFCEANKWQVEVMNVNEADLGGFKEIIVKVSGEGVYGKLKYESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVVVLHEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+G++V+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAIEDEKRRSAEETTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   V D R N+     +++++GDL+  ++
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLNEIMEGDLNALLE 344


>gi|291541665|emb|CBL14775.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           bromii L2-63]
          Length = 357

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 193/342 (56%), Gaps = 11/342 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R S L+ +   P +  N  E + +M+E + ++  +   ++ ++ +      LE+  E  
Sbjct: 10  KRYSELSERLYQPSVAGNPEEYQKIMKEIKSIEEIVLTYRKYKEAVQTEKDSLEILEETS 69

Query: 81  DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +     L   K  +    E  +   L     D  +  +E+  GAGG ES  ++ +
Sbjct: 70  DKELKELAQIELDEAKDNIKNLAEDLKILLLPKDPNDERNVIVEIRGGAGGEESALFSAV 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+ +AEK+ FK E +  ++ E  G K  + +I+G  AY   K E GVHR+ R+   
Sbjct: 130 LFRMYSMYAEKKGFKIEIINANETEIGGYKEISFMIEGEGAYSRFKYESGVHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   + +E+EI  +D +IDT+R+SGAGGQH+N T SA+RITH+P
Sbjct: 190 ESQGRVHTSTTTVAVLPEA-EDVELEIDPNDLKIDTFRSSGAGGQHINKTSSAIRITHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ ERSQ+KNK +A  +L+++L  L+ ++ ++ + I E+ K ++G G    +IR
Sbjct: 249 TGMVVECQDERSQYKNKDKALKVLKSRL--LKEKQDKQASEIAENRKMQVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R  +      ++L+G LD+ + A +A  +
Sbjct: 307 TYNY-PQGRVTDHRIGLTLYKLEEILNGSLDEVIDALVAADR 347


>gi|114567903|ref|YP_755057.1| peptide chain release factor 1 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|119361631|sp|Q0AUB8|RF1_SYNWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114338838|gb|ABI69686.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 355

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 184/344 (53%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            D+  ++   L      P +  +    + L +    L + ++  +E +    +L D+  +
Sbjct: 5   LDSLEEKYDELTHLLSQPEVLSDQARFQKLAKAHSALSDIVTMYREYKSLSRQLEDSKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L    +E+   +L +    LQ  K  +E   +   L     D     +E+ AG GG E+ 
Sbjct: 65  LVEEEDEEFRQMLADEIPQLQEKKASLEQELRILLLPQDPNDEKSVIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E ++ H  +  GIK    ++ G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAEEQGWKIEIMDTHYTDIGGIKEIVFVVDGRGAYSKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +E+ I  +D RID Y +SG GGQ VNTT SAVR
Sbjct: 185 RIPVTESGGRIHTSAATVAVLPEA-EEVEVAIDPNDLRIDVYCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV CQ E+SQHKNKA+A  +LRA+L EL   + E+ A +  + K ++G G  
Sbjct: 244 ITHVPTGEVVTCQDEKSQHKNKAKALRVLRARLKEL--LEEEKNAEMAGTRKNQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       VL+G L++ + A +A
Sbjct: 302 SERIRTYNF-PQGRVSDHRINLTLHRLESVLEGRLEEIINALIA 344


>gi|331090678|ref|ZP_08339527.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400092|gb|EGG79743.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 356

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 187/352 (53%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E +     + D
Sbjct: 1   MFDRLEDLIIRFEEIMGELQEPDVANDQNRFRKLMKEQADLTPIVDAYNEYKSAKQAIAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124
           +  +LE+   E D  + +   + L   K  VE  + E     L     D  +  +E+ AG
Sbjct: 61  SEEMLEM---ESDEEMRELAKEELSASKKRVEELEHELKILLLPKDPNDDKNIMVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG ES  +A  + RMY  +AE +++KTE +  ++    G K    ++ G + Y  +K E
Sbjct: 118 AGGDESALFAAEVYRMYVHYAESKRWKTELISFNENGIGGFKEVVFMVSGQSVYSRMKYE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ V P   + +++ I + D RID  RASG GGQ VN
Sbjct: 178 SGVHRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVVIDDKDIRIDVMRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++        S+ 
Sbjct: 237 TTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQI 296

Query: 305 EIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G    +IR+Y   P   V + R  +      ++++GDLD+ +   +A  +
Sbjct: 297 GTGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDPLIAADQ 347


>gi|319900327|ref|YP_004160055.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
 gi|319415358|gb|ADV42469.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
          Length = 371

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 209/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W++   A+  M++ + L   IS    +
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWEDQKAAEAQMKKVKGLQQWISGYNGV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLTDEVQLAFDFYKDELVSE--EEVDEAFAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWANML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWANMLMRMYLRYAETHGYKAAIANLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++I  ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVDIKVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +      TG    ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
          Length = 362

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 177/348 (50%), Gaps = 8/348 (2%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + L    D    V R   +     DP    +  + + L  E   L    S  +  +    
Sbjct: 3   DSLRERLD--QMVDRFEEVTALLSDPGTISDNNKFRELSMEHSELSEITSLWQRYRQAET 60

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHA 123
           D    LE+  E  D  +     + +     ++   + E     L     D   A+LE+ A
Sbjct: 61  DKQDALEMINEASDPEMKAMMQEEIDSAADDIAAMEEELNVMMLPKDPNDKVPAFLEIRA 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  ++  L RMY R+A  + +  E L  ++GE  G K     + G + YG LK 
Sbjct: 121 GTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIITRVSGNDVYGRLKF 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ V P V     +E++ +D R+DT+R+SGAGGQHV
Sbjct: 181 ESGAHRVQRVPETESQGRVHTSACTVAVMPEVKIDDTVELNPADIRMDTFRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIPTGVV +CQQERSQHKN+A+A  ML A++ + ++Q++ + A+    + 
Sbjct: 241 NTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRNL 300

Query: 304 TEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              G    +IR+Y   P   + D R N+       +++GDLD+ + A 
Sbjct: 301 VGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLDELLDAL 347


>gi|228994048|ref|ZP_04153949.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
 gi|229000115|ref|ZP_04159685.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|229007635|ref|ZP_04165229.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228753646|gb|EEM03090.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228759652|gb|EEM08628.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|228765696|gb|EEM14349.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
          Length = 358

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 188/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDSNKLREYSKEQSDMQETVEVYREYKDVRAQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+  + E+ E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEEKLDADMREMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
          Length = 359

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   L     DP +  +      L +E   + + ++  K+ +  L D     E+
Sbjct: 8   LDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESEEV 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  +     ++L+ ++ +    +       L     D  +  +E+   AGG E+ 
Sbjct: 68  LRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY  +AE++ +K E ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 128 LFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D ++++I   D R D YR+SGAGGQHVN T SAVR
Sbjct: 188 RVPVTESAGRVHTSTATVGVMPE-YDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y+  E + +E+     +++        
Sbjct: 247 MTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 350


>gi|313107327|ref|ZP_07793522.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
 gi|310880024|gb|EFQ38618.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
          Length = 360

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + +   +  +    +  Q   L     DS + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQATIEINPADLRVDTYRSSGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL +   Q+      I  + K  +G G  
Sbjct: 248 ITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLND--QQQAAAQQAIASTRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|332881782|ref|ZP_08449430.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680421|gb|EGJ53370.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 370

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 131/357 (36%), Positives = 203/357 (56%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D +N   ++     +T+ P  W +   A+  M++ + L   I   KE++
Sbjct: 11  KTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEVK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +   EE      +E      R    +E  +  ++L  E D  DA L++++
Sbjct: 71  TLCDELELAFDFYKEE--MVTEEEVDGLYGRTVDALEDLELRNMLRQEEDPMDAVLKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY RWAE   +K       DG+EAGIK+ T+ I+G  AYG+LK 
Sbjct: 129 GAGGTESQDWASMLMRMYMRWAESHGYKCTVSNYQDGDEAGIKTVTMQIEGEFAYGYLKS 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  S    D +R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQNV 248

Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  ++ VR+ +            ++++  + R Q +N+  A  +L+++LY+  LQKR+  
Sbjct: 249 NKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKAK 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG LD F+K+ L 
Sbjct: 309 QAEIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYLM 364


>gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
 gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
          Length = 360

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E   + +     +E   Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVS 346


>gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera sp. 301]
 gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera sp. 301]
          Length = 360

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 175/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  +N       +  N+   + L +E   +   +      +    D      +
Sbjct: 9   LATLSERLEEINRLMSSEGVTNNMDNYRKLTQEHAEITPIVEQYHLFEQAEADIKEAQSM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE  +  +    +VE   Q   L     D  + +LE+ AG GG ES  + 
Sbjct: 69  LSDPDMKEFAQEEIEAGKEKLEQVEKSLQVLLLPKDPNDDKNLFLEIRAGTGGDESGLFC 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AEK+K+K E +  ++ E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEKQKWKVEIMSANESEVGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTETQGRIHTSACTVAVLPEADEVSDVVINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ+ RSQH NKAQA  +L A++   ++   E+ + I    K+ IG G    +
Sbjct: 249 APTGIVVECQEGRSQHANKAQAMAVLAARIKAKQVD--EQNSKIASERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       + +GD+D+ + A  A
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELIGALSA 346


>gi|193214860|ref|YP_001996059.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
 gi|238692722|sp|B3QYI4|RF1_CHLT3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193088337|gb|ACF13612.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
          Length = 358

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 182/345 (52%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   R   +  +  DP +  N  + + L +E   L   +    E +        
Sbjct: 1   MFDQLQSIKDRYKEIEKQLSDPGVISNQDKFRQLNKEYSGLSEIVKAYDEYRKAKDALQQ 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL   E D  + +    +      +V   +       L   EADS +A +E+ AGAGG
Sbjct: 61  SKELLYTESDPEMKELAQADYDEYSEKVPELEQQLKILLLPKEEADSRNAMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  LLRMY R+AE+  +K E L+ ++     G K AT+ + G + YG +K E G
Sbjct: 121 DEAALFAADLLRMYQRFAERNGWKCEVLDYNESSGLGGFKEATISLSGDDVYGTMKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   +  +IEI + D ++DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRVHTSAASVAVLPEA-EDFDIEIRKEDLQMDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY+++L ++++       S    
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKLAEQQKERADLRRSMVST 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R      +   +LDGDL + ++A 
Sbjct: 300 GDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQLLDGDLFEIIEAL 343


>gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4]
          Length = 360

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 181/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       + E     +R+       Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|333029659|ref|ZP_08457720.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
 gi|332740256|gb|EGJ70738.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
          Length = 370

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 205/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D+    L     +T+ P  W +   A+  M+  + +++ I   +  
Sbjct: 10  IKERTLALRRYLDIDSKKIELEEEQLRTQAPDFWDDPKVAQSQMKLVKGIEDWIKGYENS 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                +  +  +   +E      +E      +  + +E  + +++L  EAD     L+++
Sbjct: 70  VALTEELELAFDFYKDELVSE--EEVDAAYNKALVCIENLELKNMLRQEADQLGCILKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+R+Y RWAE   +K     + +G+EAGIK+ T+ ++G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRLYLRWAEDHNYKATLSNLQEGDEAGIKTCTIQVEGEYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+SI+V P+VD+SIE+ I  S    D +R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASIFVTPLVDESIEVTIDPSAITWDLFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +            ++V+  + RSQ  N+  A  +LR+ LYE ELQKR  
Sbjct: 248 VNKVETGVRLRYQYKDPDTGQEEEILVENTESRSQLDNRENAMRLLRSILYEKELQKRLA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E SK +I WG QIRSYV    + VKD RTN + +  + V+DGD+D+F+KA L 
Sbjct: 308 ELRKIEDSKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGDIDEFIKAYLM 364


>gi|323343897|ref|ZP_08084124.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
 gi|323095716|gb|EFZ38290.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
          Length = 373

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 128/357 (35%), Positives = 208/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            + + L    D D  +        +T+ P  W++   A+  M+  + ++  I   KE++ 
Sbjct: 12  ERADALHRYLDIDRKMVEFEEEQLRTQAPDFWEDPQRAQEQMKLVKGIEKWIKGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     DD    +E   +  +    +E  + +++L  + D  +  L++++G
Sbjct: 72  YADELQLAFDFYH--DDMVSEEEVDADYAKAIKAIEDLELKNMLRQQEDPMECVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA ML+RMY RWAE   +K     + +G+EAGIKS T+ I+ G  AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHGYKVSISNLQEGDEAGIKSVTMEIEGGEYAYGFLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDSIEVFVDPARVSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ ++           ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEE 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|116052810|ref|YP_793127.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893762|ref|YP_002442631.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
 gi|254244443|ref|ZP_04937765.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|296391486|ref|ZP_06880961.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAb1]
 gi|122257179|sp|Q02G09|RF1_PSEAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739119|sp|B7V0L1|RF1_PSEA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115588031|gb|ABJ14046.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197821|gb|EAZ61884.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|218773990|emb|CAW29805.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
          Length = 360

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + +   +  +    +  Q   L     DS + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL +   Q+      I  + K  +G G  
Sbjct: 248 ITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLND--QQQAAAQQAIASTRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|310659436|ref|YP_003937157.1| peptide chain release factor rf-1 [Clostridium sticklandii DSM 519]
 gi|308826214|emb|CBH22252.1| peptide chain release factor RF-1 [Clostridium sticklandii]
          Length = 356

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 187/349 (53%), Gaps = 7/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   ++   LN K  DP +  N    + LM+E   ++  +   +E +        
Sbjct: 1   MFDKIEFVEEKYKELNQKISDPEVINNQSLWQKLMKEHAEIEPVVMKYREYKTVKSQFEG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+    +D  + +     L  ++  +    E  +   L     D  +  +E+ AGAGG
Sbjct: 61  AKEILESSNDEEMRELAKMELSELEESLEAVSEELRVLLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMY+ +A  +++K E +  +D    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAGVLFRMYSMYASSKRWKVELMSSNDTGVGGYKEVVFMIIGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V++  E+E++ +D R+D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESAGRIHTSTATVAVLPEVEEVGEVELNLNDVRVDVFRSSGNGGQSVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+TH+PTG+V+  Q E+SQ KNK +A+ +LRAKLY++EL+K ++E+A   +S     
Sbjct: 241 SAVRLTHVPTGIVISMQDEKSQLKNKEKAFKILRAKLYDIELEKAQKEVARERKSQVGTG 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R  +        L+GDLD+ + A +   +
Sbjct: 301 DRSERIRTYNY-PQGRITDHRIGVTLYKLDAFLNGDLDEMVDALITTDQ 348


>gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SS3/4]
          Length = 357

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/349 (33%), Positives = 187/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ ++    L  +  +P + ++  + + LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDRLDDMLRHYEELMLELNNPSVAEDQRKFRKLMKEQADLAPIVDAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K  +E  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLALLDEESDEEMKELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY  +AE + +KTE + + +    G+K    +I G  AY  LK E GV
Sbjct: 121 DEAALFASELYRMYVHYAESQHWKTEMINVSESGIGGMKEVEFMITGHGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ + P   +  ++ I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAIMPEA-EEFDVVIDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+THIPTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL++R+ E A    S     
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELERRQNEEAAERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       ++DGD+ + + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLYKIDAIMDGDIQELIDSLIAADQ 347


>gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 360

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + LQ  K   E  + +     L     D  +A++EV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIV 345


>gi|317401193|gb|EFV81839.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54]
          Length = 360

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 177/344 (51%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEEDLATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D ++    +++      Q   L     D    +LE+ AG GG ES 
Sbjct: 69  LA---DPELKAMAEDEIKSGRVKLESLEAALQLLLLPRDPNDGRSVFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  LLRMYTR+AE+R ++ E +     E  G K     I+G  AYG LK E G HR+ 
Sbjct: 126 LFSGDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIEGDGAYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ +    D+  EI I+ SD RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + E   RE  +      K+ IG G  
Sbjct: 246 ITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKE--TRERQSKEAAERKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++GDL++   A +A
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 346


>gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis
           PHE/MN1-00]
 gi|119361555|sp|Q1MSG7|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 359

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 183/340 (53%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  Q+   +      P+++ +  + + L +    L   ++  ++ +          EL
Sbjct: 5   LENLEQKFIEIECSLAQPNIFNDQEQYRKLTKTHSDLKPIVTTFQQFKKLQQQLSENKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  I +   + +++++LE+ + ++E     L     D  +  LE+ AG GG E+ 
Sbjct: 65  ISD-IDPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AEK  +K E +   D +  G K    LI+G N Y  LK E G HR+ 
Sbjct: 124 LFAADLFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++IEI   + R D +R+SG GGQ VNTTDSAVR
Sbjct: 184 RVPTTESQGRIHTSAATVAVLPEA-EDVDIEIRPEELRFDVFRSSGPGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +THIPTG+VV CQ E+SQHKNKA+A  +L ++L +++ +++E E A+   +         
Sbjct: 243 VTHIPTGIVVTCQDEKSQHKNKAKALKVLSSRLLQIKQEQQEIEQADARRALVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+   S   V++G++ +F+ A 
Sbjct: 303 RIRTYNF-PQGRVTDHRINLTLYSLIKVMEGEIQEFIDAL 341


>gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
 gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
          Length = 289

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 133/280 (47%), Positives = 188/280 (67%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +   E D ++LQE    + ++  +++  + + LLSG  D+  A L + AGAGGT++QDWA
Sbjct: 1   MLELETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTISAGAGGTDAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMYTRW E   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLVRIS
Sbjct: 61  FMLMRMYTRWGEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRSEMGTHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++N +R TSF+ + V P +D+S+++EI + D  I T R+ G GGQ+VN  ++AVRI H
Sbjct: 121 PFNANGKRQTSFAGVEVMPQIDNSVQLEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+ V+C +ERSQ +NK +A N L+AKL  +  ++R +          E  WG QIR+
Sbjct: 181 IPTGLAVRCTEERSQLQNKEKALNRLKAKLLVIAKEQRAQEIAEIRGDMVEASWGNQIRN 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV  PYQMVKDLRTN E T+  DV++G+LD F++A L  +
Sbjct: 241 YVFHPYQMVKDLRTNTETTAIGDVMNGELDPFIQAYLRQE 280


>gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1]
 gi|81598974|sp|Q5P7G7|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1]
          Length = 359

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 183/339 (53%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL+ L+ +       +++   + L RER  ++  ++     +    D      +
Sbjct: 9   LELLTHRLAELDRELSSGDAVRDMDGFRSLGRERAEIEPVVALYGAYRQAEADCESARAM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + + E      R++      Q   L    +D  + +LEV AG GG E+  +A
Sbjct: 69  LADAEMRELAESELETGAVRLQALEAELQCALLPCDPSDERNLFLEVRAGTGGDEASLFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++++K E +     +  G K   L I G  AY  LK E G HR+ RI 
Sbjct: 129 GDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILRIAGAGAYSKLKFESGGHRVQRIP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   + I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 VTETQGRIHTSACTVAVMPEADEVEAVNINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+N+AQA ++L A++ + +L  RE+ A    + K+ +G G    +
Sbjct: 249 LPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQL--REQQAREAATRKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R N+       V+ GDLD+ + A 
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLDAVMQGDLDELVDAL 344


>gi|254447802|ref|ZP_05061267.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
 gi|198262582|gb|EDY86862.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 182/339 (53%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V R   +     DP +  +    + L +E   L+       E Q +  +     E+
Sbjct: 9   LENLVARHEEVGMLLSDPDVINDQNRFRDLSKEYAELEPVTKTFSEYQTQSDNLSTAEEM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE  D+ +  I+   +  Q   L S   D+++ Y+E+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMAQEEIDSARVEIERLEQELQILLLPSDPHDNSNIYVEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE + ++ E     +GE  G K     I G  A+  +K E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAENQGWRVELQAESEGEHGGYKEVIARIIGQGAFSKMKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P +D+    +I+ +D RIDT+RASGAGGQHVN TDSA+RITH
Sbjct: 189 ETESQGRIHTSAATVAIMPEIDEVEAPDINPADLRIDTFRASGAGGQHVNKTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           +PTG+VV+ Q ERSQHKN+A+A + L++K+ + E  K+ +E A   +S         +IR
Sbjct: 249 VPTGIVVESQAERSQHKNRARAMSQLQSKIIQGERDKQAQEQAATRKSLVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+      DV+ G L+  +   ++
Sbjct: 309 TYNF-PQGRVTDHRINLTLYKLDDVMGGGLEQVIDPLVS 346


>gi|300690281|ref|YP_003751276.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
 gi|299077341|emb|CBJ49966.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
          Length = 356

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 181/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVATAQEL 64

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  + E     +R+       Q   L     D  + +LE+ AGAGG ES  +A
Sbjct: 65  LADPDMKAFAEDEIRAARERMTTLEAELQRLLLPRNPNDHRNIFLEIRAGAGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A  A
Sbjct: 303 IRTYNF-PQGRITDHRINLTLYKIDAIMDGDLDELLGALAA 342


>gi|300117843|ref|ZP_07055610.1| peptide chain release factor 1 [Bacillus cereus SJ1]
 gi|298724707|gb|EFI65382.1| peptide chain release factor 1 [Bacillus cereus SJ1]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEDKLDADMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|229033962|ref|ZP_04188916.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
 gi|228728388|gb|EEL79410.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+    E+ E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEDKLDADMREMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEISIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|229176005|ref|ZP_04303501.1| Peptide chain release factor 1 [Bacillus cereus MM3]
 gi|228607498|gb|EEK64824.1| Peptide chain release factor 1 [Bacillus cereus MM3]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+    E+ E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEDKLDADMRDMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEISIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1]
          Length = 376

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 172/340 (50%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L+  +    + +    D    
Sbjct: 20  RLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEEDIETA 79

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + QE     + +  ++E       +     D+N AYLEV AG GG E+ 
Sbjct: 80  ESMLSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTGGDEAA 139

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE R ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 140 IFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESGAHRVQ 199

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 200 RVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVR 259

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTGVVV+CQ+ERSQHKNKA+A  +L ++L   +   +E   + +            
Sbjct: 260 ITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQETATSEMRRDLVGSGDRSE 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 320 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 358


>gi|227355360|ref|ZP_03839761.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
 gi|227164584|gb|EEI49455.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
          Length = 360

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 187/342 (54%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +  +  +    + L +E   L +  S  ++ + ++ D++   E+
Sbjct: 9   LEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDVTSCYRQWR-KVQDDMEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  +       +  Q   L     D  + +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   EIS SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+E  A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQEAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++G LD  ++  + 
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQPIVT 346


>gi|25453244|sp|P59102|RF2_BUCAP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 239/352 (67%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL ++   L    D+     R+  ++ +     +W+       L +E+  L+  I+ I  
Sbjct: 12  KLIQRKKDLKRYLDYVAKSTRILEIDLELSSTEIWKKKEYVHNLNKEKNLLNIIINKINN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + + +I L+LA+E  D +I+QE S+ +++I  +++  +F  + S + D  + Y++V
Sbjct: 72  IEKNIKEMIIFLDLAIETKDNAIIQEISEEIKKIAEKIQELEFYRMFSNQHDHCNCYIDV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG ++QDW+ +LLRMY +W++K+ FKTE +E   GE  GIKS+T+ + G  A+GWL
Sbjct: 132 QAGSGGVDAQDWSKILLRMYLKWSDKKGFKTEIIEESTGEIVGIKSSTIKVSGQYAFGWL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G+HRL+R SP+DS  RRHTSFSSI++YP ++D I IEI+ SD RID YRASGAGGQ
Sbjct: 192 RTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDIEDKINIEINPSDLRIDVYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE+++++++E     E 
Sbjct: 252 HVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAIKQMKSKLYEMKIKEKKEKQKKIEK 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++I WG QIRSY+L     +KDLRT +EK +   VLDGDLDDF++ +L +
Sbjct: 312 NKSDISWGNQIRSYIL-DNSKIKDLRTGVEKYNVQSVLDGDLDDFIEQSLIM 362


>gi|323486285|ref|ZP_08091611.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323693924|ref|ZP_08108111.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
 gi|323400395|gb|EGA92767.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323502021|gb|EGB17896.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
          Length = 357

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 183/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L  +   P +  +    + LM+E+  L   +   KE +    D   
Sbjct: 1   MFDRLDDLLIRYEELLEELNSPDVAMDQNRFRKLMKEQADLTPLVDAYKEYKKANQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  +     + L   K  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRDMAKEELADAKKRIEEMEQQLKILLLPKDPNDDKNVMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY  +AE  ++KTE + +++    G K    ++ G  AY  +K E GV
Sbjct: 121 DEAALFASELYRMYVHFAESNRWKTELVSVNENGIGGFKEVVFMVTGQGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +S+ V P   +  ++ I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTASVAVMPEA-EEFDVVIDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+ + A    S     
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQNQEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V + R  +       V++G+L++ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMNGELNELIDSLIAADQ 347


>gi|82703754|ref|YP_413320.1| peptide chain release factor 1 [Nitrosospira multiformis ATCC
           25196]
 gi|119361568|sp|Q2Y5P3|RF1_NITMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82411819|gb|ABB75928.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosospira
           multiformis ATCC 25196]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 178/339 (52%), Gaps = 7/339 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               RL  LN       +  N+ + + L RER  +   +           D     E+A 
Sbjct: 11  QLSVRLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQDIHTAQEMAA 70

Query: 78  EEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           E +       E  D  +R+       Q + L     D  + +LE+ AG GG ES  +A  
Sbjct: 71  EAEMREFADAEIRDAKERLVRYGAELQKQLLPKDPNDERNIFLEIRAGTGGDESALFAAD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+AE+++++ E +     +  G K     I G  AY  LK E G HR+ R+   
Sbjct: 131 LFRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLKFESGGHRVQRVPAT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS  ++ V P  D+  ++ ++ ++ RIDT+RASGAGGQH+N TDSAVRITH+P
Sbjct: 191 ETQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQHINKTDSAVRITHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIR 313
           TG+VV+CQ  RSQHKNKAQA ++L A++ + ++  +E+ +    + K+ +G G    +IR
Sbjct: 251 TGIVVECQDGRSQHKNKAQAMSVLAARIRDKQM--QEQQSKQAATRKSLVGTGNRSGRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       ++DGDL++   A LA
Sbjct: 309 TYNF-PQGRITDHRINLTLYKIEQIMDGDLNELCSALLA 346


>gi|293602161|ref|ZP_06684612.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
 gi|292819431|gb|EFF78461.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
          Length = 356

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 177/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL+ ++     P    ++   + L RER  L+  +           D     E+
Sbjct: 5   LEHLCNRLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFARTEEDLATAQEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D ++  ++++E  +       L     D    +LE+ AG GG ES 
Sbjct: 65  LS---DPDMKAMAEDEIKTGRVKLESLESALQLLLLPRDPNDGRSVFLEIRAGTGGDESA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  LLRMYTR+AE R ++ E +     E  G K     I G  AYG LK E G HR+ 
Sbjct: 122 LFSGDLLRMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V    D+  EI I+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 182 RVPATEAQGRIHTSACTVAVMAEADEMSEIVINANDLRIDTFRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ +RSQH+NK +A  +L A+L + E ++R+ + A   +S         
Sbjct: 242 ITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQSKEAAERKSLIGTGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDL++   A +A
Sbjct: 302 RIRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 342


>gi|282158488|gb|ADA77879.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 248

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 189/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK
Sbjct: 1   MFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPT 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT +E T+   VLDGDLD F
Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRTGVENTNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|209516553|ref|ZP_03265407.1| peptide chain release factor 1 [Burkholderia sp. H160]
 gi|209502994|gb|EEA02996.1| peptide chain release factor 1 [Burkholderia sp. H160]
          Length = 360

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 181/342 (52%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVDQYGLWRQAQNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D S+     + ++  +  +E    + + +L      D  + +LE+ AG GG ES 
Sbjct: 69  LT---DASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G +   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +  +++ + A   ++         
Sbjct: 246 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQTHEQQTKEAATRKNLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 306 RIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVS 346


>gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
 gi|238692126|sp|B3E628|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
          Length = 355

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 182/345 (52%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   R   L +   DP +  N  E + L RE   L   I   +  +  L +   
Sbjct: 1   MFDKIQDLEIRFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   + +E    L + K  ++   +   L     DS D  LE+ AG GG ES
Sbjct: 61  NQELLADPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPNDSRDVILEIRAGTGGDES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AEK ++K E L   + E  G K     I+G + Y  LK E G HR+
Sbjct: 121 ALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ +     + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMAEA-EDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG VV CQ+ERSQ KN+A+A  +L+ ++  L+  ++E+ A +    K ++G G 
Sbjct: 240 RITHIPTGTVVACQEERSQIKNRAKAMKVLKTRI--LDTIQQEQNAKLAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R  +       ++ GD+++   A  A
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDSIMAGDIEEITDALRA 341


>gi|304440460|ref|ZP_07400349.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371212|gb|EFM24829.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 355

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 121/336 (36%), Positives = 183/336 (54%), Gaps = 7/336 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             R   L     +  +  N    +    E   L+  +   +E +    D     EL  E+
Sbjct: 9   EDRYVELEKDLVNVDVINNSALYQKTAIEHAELEPIVHKYREYKKLEEDLSGNKELLTED 68

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
            D  +LQ   D+++ I+ E+E   ++ + LL      D+ +  +E+ AGAGG E+  +A 
Sbjct: 69  LDDDMLQLVKDDIKNIEQELEKVTEELKRLLVPKDPNDNKNVIVEIRAGAGGDEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           +LLR Y  +AEK  FKT+ +  ++    G K    +I+G  AY  LK E GVHR+ R+  
Sbjct: 129 VLLRQYLMYAEKCGFKTDIMSTNEIGIGGYKEVVFMIEGKGAYSKLKYESGVHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S+ R HTS +++ V P   + +EIEI  SD R+D +R+SG GGQ VNTTDSAVRITH+
Sbjct: 189 TESSGRIHTSTATVAVLPEA-EDVEIEIDPSDIRVDVFRSSGNGGQSVNTTDSAVRITHL 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRS 314
           PTG+V+ CQ E+SQ KNK +A  +L+ KLY+LELQK+ +E++    S         +IR+
Sbjct: 248 PTGIVISCQDEKSQLKNKEKAMKILKTKLYDLELQKQAQELSAEKRSQIGSGDRSERIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           Y   P   V D R  +       + +GDLD+ + A 
Sbjct: 308 YNY-PQGRVTDHRIGLTSHRIDAINNGDLDEIIDAL 342


>gi|268316168|ref|YP_003289887.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
 gi|262333702|gb|ACY47499.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
          Length = 360

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 185/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  +      L RE   L   +  I+  +  L +   L EL
Sbjct: 7   LEEIKRRYEEVTQALSDPEVAADPKRLAELGREHASLRAVVEAIEAYERLLAEQESLREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L+ ++  +    E  +   +   E D  +A +E+ AG GG E+ 
Sbjct: 67  IRTESDPELIRMARHELEELEERLPAVEEDLRLRLIPQDEMDRRNAIVEIRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E L+   G   G K     +KGP+ YG +K E GVHR+ 
Sbjct: 127 LFAGDLFRMYSRFAERKGWKLEVLDASPGTVGGFKEIIFSLKGPDVYGTMKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +S+ V P   + +++EI   D RID +RASG GGQHVN T+SAVR
Sbjct: 187 RVPATESQGRIHTSAASVVVLPEA-EEVDVEIRPEDLRIDVFRASGPGGQHVNRTESAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV CQ E+SQH+N+ +A  +LRA+LYELE +++    +    +  + G    
Sbjct: 246 ITHVPTGIVVACQDEKSQHQNREKALRILRARLYELEQERQRAERDAVRRASIKTGDRSA 305

Query: 311 QIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R   +++      +++G+LD+ + A    +
Sbjct: 306 KIRTYNF-PQDRVTDHRLEGDLKNWPLHRIIEGELDELINALRTAE 350


>gi|258544156|ref|ZP_05704390.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
 gi|258520598|gb|EEV89457.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
          Length = 250

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 149/246 (60%), Positives = 186/246 (75%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+A+L++ AG+GGTE+QDWA+MLLRMY RW E R FKTE +E   G+ AGIK
Sbjct: 1   MFSGELDPNNAFLDIQAGSGGTEAQDWASMLLRMYLRWGEARGFKTELIEESPGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+   G  AYGWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +
Sbjct: 61  SATIEFTGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFAAVFVSPEIDDNIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+D YRASGAGGQHVN T+SAVRITH+PT +VVQ Q  RSQH+N++     LRAKLYE
Sbjct: 121 DLRVDVYRASGAGGQHVNRTESAVRITHLPTNIVVQSQNSRSQHENRSTCMKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LEL KR   A   E SK++IGWG QIRSYVL     +KDLRT  E ++   VLDG LD F
Sbjct: 181 LELSKRSASAQAIEDSKSDIGWGNQIRSYVL-DQSRIKDLRTGYETSNTQAVLDGGLDPF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 LQASLK 245


>gi|325527071|gb|EGD04495.1| peptide chain release factor 1 [Burkholderia sp. TJI49]
          Length = 360

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D ++  +  +   + E     L     D  + +LE+ AG GG ES 
Sbjct: 69  L---GDPSMRDFAEDEIRSARERMVRLEVELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVS 346


>gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
 gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
          Length = 363

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   +     D  +  +  + + L +E   ++  +    +      +      L
Sbjct: 9   LQTLDERYEEIGHLLSDAGVISDQNKFRELSKEYAEIEPVVKAFAQYTQAEENLAEAEAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A + DD  + +   +     K E+E      Q   L     D  +  LE+ AG GG E+ 
Sbjct: 69  AKD-DDPDMREMGQEEYSAAKEEIERLDGELQILLLPKDPNDGKNVILEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMYTR+AEKR +K E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRIAGDGVYGQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P +++  +++I+++D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A ++L  +L +  +QK + E A   +S         
Sbjct: 248 ITHLPTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKAQAEQAAERKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +++ GD+D  ++  L
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTVYKLDELMQGDVDMIIQPLL 347


>gi|218900455|ref|YP_002448866.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228903804|ref|ZP_04067920.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|228911168|ref|ZP_04074974.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228942476|ref|ZP_04105013.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228968458|ref|ZP_04129447.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228975408|ref|ZP_04135964.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982045|ref|ZP_04142338.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|218545538|gb|ACK97932.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228777709|gb|EEM25983.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|228784390|gb|EEM32413.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228791238|gb|EEM38851.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228817218|gb|EEM63306.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228848531|gb|EEM93379.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228855831|gb|EEN00375.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|326943127|gb|AEA19023.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
 gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
 gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|122263928|sp|Q03A29|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693030|sp|B3WDK7|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei ATCC 334]
 gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
 gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei LC2W]
 gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei BD-II]
          Length = 359

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   L     DP +  +      L +E   + + ++  K+ +  L D     E+
Sbjct: 8   LDGLLDRYEELQELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESEEV 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  +     ++L+ ++ +    +       L     D  +  +E+   AGG E+ 
Sbjct: 68  LRESKDDDMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY  +AE++ +KTE ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 128 LFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D ++++I   D R D YR+SGAGGQHVN T SAVR
Sbjct: 188 RVPVTESAGRVHTSTATVGVMPE-YDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +THIP+G+VV  Q ERSQ +N+A+A  +LR+++Y+  E Q +E+     +++        
Sbjct: 247 MTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEKYDQNRKNAIGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 350


>gi|197284958|ref|YP_002150830.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
 gi|238693176|sp|B4EVR7|RF1_PROMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194682445|emb|CAR42344.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
          Length = 360

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 187/342 (54%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +  +  +    + L +E   L +  S  ++ + ++ D++   E+
Sbjct: 9   LEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDITSCYRQWR-KVQDDMEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  +       +  Q   L     D  + +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   EIS SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+E  A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQEAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +V++G LD  ++  + 
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQPIVT 346


>gi|299821847|ref|ZP_07053735.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
 gi|299817512|gb|EFI84748.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   LN    DP +  +    + L +E+  +   +   ++ ++         EL
Sbjct: 5   LQSVENRYEELNELLSDPDVVSDPKRLRDLSKEQSSISQTVETYRDYKEVTDQIAETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   + L  ++       E  +   +     D  +  +E+   AGG E+ 
Sbjct: 65  LNEKLDDDMREMAKEELNELQENKTHLEEKLKLLLVPKDPNDDKNVIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R +K E ++ +     G K   ++I G  A+  LK E G HR+ 
Sbjct: 125 LFAGDLFRMYSRYAESRGWKAEIMDANPTGIGGYKEVIVMINGDGAFSRLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EI+I + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EDVEIDIQDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQIKNKEKAMKVLRARIYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G +D+ + A +   +
Sbjct: 304 RIRTYNF-PQNRVTDHRIGLTIQKLDQVMEGKIDEIIDALIVEDQ 347


>gi|189459974|ref|ZP_03008759.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
 gi|189433347|gb|EDV02332.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
          Length = 371

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 207/357 (57%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D +N   ++     +T+ P  W +  +A+  M++ + L   I     ++
Sbjct: 11  KTRTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKSLQGWIEGYNAVK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +   +E      +E  +   +    +E  + +++L  EAD  D  L++++
Sbjct: 71  TLTDELELAFDFYKDE--LVTEEEVDEAYAKSLQALEELELKNMLRSEADQMDCVLKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW++ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LKG
Sbjct: 129 GAGGTESQDWSSMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVVVEPARLSWDTFRSGGAGGQNV 248

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E 
Sbjct: 249 NKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEE 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 309 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|163943017|ref|YP_001647901.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
 gi|229470347|sp|A9VSC7|RF1_BACWK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163865214|gb|ABY46273.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
          Length = 355

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  +  + E  +   +     D  +  +EV   AGG
Sbjct: 61  AKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEINIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|47570471|ref|ZP_00241104.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228988555|ref|ZP_04148642.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158891|ref|ZP_04286948.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|47552867|gb|EAL11285.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228624502|gb|EEK81272.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|228771172|gb|EEM19651.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 358

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|242239290|ref|YP_002987471.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
 gi|242131347|gb|ACS85649.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
          Length = 361

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  ++   +ML RE   L +     +  Q    D++   E+
Sbjct: 9   LEALQERHEEVQALLGDPSIISDMDRFRMLSREYAQLTDITRCFQRWQQA-QDDIATAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   D L+  +   +  + +     L     D    +LE+ AG GG E+ 
Sbjct: 68  LL--DDPEMREMAQDELKEAREAGDTLEQQLKVLLLPRDPDDERGCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   DGE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEMVSASDGEHGGYKEVIAKVIGEGAYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEVPEAELPDINPVDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLDMLIQPIV 345


>gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400]
 gi|119361604|sp|Q087I4|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           frigidimarina NCIMB 400]
          Length = 361

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +S  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDATVISDQDRFRGLSKEYSQLEDVVSSFKAFQQAQKDFDYAKEM 68

Query: 76  ALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   D  ++    ++   +  Q   L +   D  +A+LE+ AGAGG E+ 
Sbjct: 69  -LEEDDLEMREMAQDEYKQSKQVLEKLEDELQVLLLPTDPNDDTNAFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+ E  +++ E + +++GE  G K   + I G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLYRMYSRYCEANRWQMEVMNVNEGEHGGFKEIIVKISGDGAYGKLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++  I I+ +D ++DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVVVLHEVPEAEAISINAADLKVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+G++V+CQ +RSQHKN+AQA ++L A++  +E +KR         S    G    
Sbjct: 248 ITHIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEETTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   V D R N+     ++V++GDL+  + 
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDLNVLLD 344


>gi|160947003|ref|ZP_02094206.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
 gi|158447387|gb|EDP24382.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
          Length = 365

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           LFD  +  V++   L  K  DP + +++   + L +E   +   +   +E      +   
Sbjct: 10  LFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  + +   + +  ++  +E ++       L     D  + ++EV AG GG
Sbjct: 70  NKEMLKESLDDEMKELVKEEISELEDSIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTGG 129

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY  +A+K+K+KTE + I +    GIK    L+KG  AY  LK E GV
Sbjct: 130 DEAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESGV 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P V + +++ I+++D RID YRASG GGQ VNTTD
Sbjct: 190 HRVQRVPATESSGRIHTSAATVAVLPEV-EDVDVVINQNDLRIDVYRASGNGGQCVNTTD 248

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGVVV CQ E+SQ KNK +A  +L+++LY  E  + E+  +I ++ K++IG
Sbjct: 249 SAVRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLY--EKYQEEQNKDIADARKSQIG 306

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+        L+GD+ + + A +   +
Sbjct: 307 SGDRSERIRTYNF-PQGRVTDHRINMTIYQLDSFLNGDISEMIDALITSDQ 356


>gi|260890431|ref|ZP_05901694.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
 gi|260860051|gb|EEX74551.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
          Length = 360

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 182/345 (52%), Gaps = 6/345 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V +   L     DP +  +  +     +    +D  +      ++R  +   L E 
Sbjct: 5   LDDVVLKHKELTEMLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMESLKED 64

Query: 76  ALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +          + I    E  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LKAEKDSEMKEMMLEEIHSIEEEIPQLEEELKILLLPKDPNDDKNVIMEIRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LIKG  AY  LK E GVHR+ 
Sbjct: 125 LFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P +DD  E+EI+ SD +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K+   + N   S         
Sbjct: 245 ITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVENERRSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDGDLD+ + A +A ++
Sbjct: 305 KIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQ 348


>gi|313893571|ref|ZP_07827140.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441842|gb|EFR60265.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 360

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 186/345 (53%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L  +  DP +     E + L R+   L   +   +  +  L      +E+  +
Sbjct: 9   IEDKFMDLEQRISDPEIIARQDEWRKLTRQHSQLSETVETFRTYKKVLAGLDEAMEVIED 68

Query: 79  ED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  D    +   + L+ +K + E  +       L     D  +  +E+  GAGG E+  +
Sbjct: 69  KSLDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE + ++ E ++ ++ E  G K     ++G N Y  +K E GVHR+ R+
Sbjct: 129 AGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVEGENVYSKMKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P + + ++IE++E D +IDTYRASGAGGQH+N T+SAVRIT
Sbjct: 189 PATETQGRVHTSTVTVAVLPEM-EDVDIEVNEKDLKIDTYRASGAGGQHINKTESAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ +RSQ KNK +A  +LRAKL +    ++E  A++    K+++G G    
Sbjct: 248 HLPTGIVVACQDQRSQLKNKDKAMRVLRAKLQD--QAEQEAQASMAADRKSQVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       VL+GDLD+ ++A  A  +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLDAVLNGDLDEIIQALNAADQ 349


>gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
 gi|238691299|sp|B2JHK8|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
          Length = 360

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNIDQYRKLTREHAELQPVVEQYGLWRQTMNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +     +E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LSDASMKDFAEEEIRASRERMETLESELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       +++GDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLESIMEGDLDELIAALVS 346


>gi|262163922|ref|ZP_06031661.1| peptide chain release factor 2 [Vibrio mimicus VM223]
 gi|262172260|ref|ZP_06039938.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|261893336|gb|EEY39322.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|262027450|gb|EEY46116.1| peptide chain release factor 2 [Vibrio mimicus VM223]
          Length = 263

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 155/261 (59%), Positives = 201/261 (77%), Gaps = 1/261 (0%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  +++++E  +F  + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FK
Sbjct: 1   MDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFK 60

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++
Sbjct: 61  TEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFI 120

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHK
Sbjct: 121 YPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 180

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT IE
Sbjct: 181 NKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIE 239

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
             +   VLDGDLD F++A+L 
Sbjct: 240 NRNTQAVLDGDLDKFIEASLK 260


>gi|332295519|ref|YP_004437442.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
 gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
          Length = 361

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 128/344 (37%), Positives = 185/344 (53%), Gaps = 12/344 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             + R   +N       +  N  +   L +E+  L+  ++   E+         L EL  
Sbjct: 12  KLINRYKEINELLSSLEIINNPSKLISLSQEKAELEEVVNNYNELNKLKNYLSDLKEL-K 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133
             +D  I     +  Q ++  +E  + + L         D  +  LE+ AGAGG E+  +
Sbjct: 71  NSEDEEIKALAEEEFQVVEKNIENLESKLLNFILPKDPLDEKNIILEIRAGAGGEEAALF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ LLRMY R+AE++  KTE L I++    GIK A + IKG   Y  LK E G HR+ R+
Sbjct: 131 ASELLRMYLRYAERKNAKTEILSINETGIGGIKEAIISIKGKRIYSRLKFESGTHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   D I+I I E D +IDT+RA GAGGQHVN TDSAVRIT
Sbjct: 191 PETESGGRIHTSTATVAVLPEA-DEIDITIDEKDLKIDTFRAGGAGGQHVNKTDSAVRIT 249

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ ERSQ +NK +A  +L AK+  LE ++      I  S + ++G G    
Sbjct: 250 HLPTGIVVACQDERSQFQNKEKAMRILAAKI--LEEKRVASEKEIAMSRRIQVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N+     ++VLDGDLD+ + A +A +
Sbjct: 308 KIRTYNF-PQGRVTDHRINLTLYRLNEVLDGDLDEIIDALIAAE 350


>gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
 gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
          Length = 357

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 178/338 (52%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   ++ +   P +  +      + +E + L   +      Q    D     EL
Sbjct: 5   LEAIKERFEEVSQQIIQPEVVSDSTRYSKISKEYKDLGRIVEQYALYQKLQKDIAGTKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L  +  ++E  +   + LL      DS +  LE+  G GG E+ 
Sbjct: 65  IATEKDEDLREMAKEELDDLLPKLEELEQNIKELLIPKDPNDSRNIILEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+ EK  +++  ++  +G   G K     ++G + YG +K E GVHR+ 
Sbjct: 125 IFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKVEGEDVYGKMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +S+ V P   + ++++I+ +D RIDT+++SGAGGQ VNTT SAVR
Sbjct: 185 RVPATESQGRIHTSAASVAVLPEA-EEVDVQINMNDVRIDTFQSSGAGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIP+G+VV CQ ERSQ KNK +A ++LR++LYE+EL+K  +  +    S    G    
Sbjct: 244 LTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKHNDAISSQRKSMVGSGDRSD 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   + D R      +   V++GD+ D ++
Sbjct: 304 KIRTYNY-PQSRITDHRIGYTVYNLPAVMEGDIADLIE 340


>gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
 gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
          Length = 357

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 171/342 (50%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  ++   L T+  DP +  +    + L +    L   +   +E +    D     EL
Sbjct: 5   LESLERKYVDLETQLSDPAVVGDQERYRKLAKAHADLAEVVEAFREHKRLSRDLEENTEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  + +     ++ I+  +   +             D  +  LE+ AG GG E+ 
Sbjct: 65  AQD-PDPEMRELALAEVRTIREALPELEARLKLLLLPKDPMDEKNILLEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE +++K E +   +    G K     I G   Y  LK E G HR+ 
Sbjct: 124 LFAGDLFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANISGDKVYSRLKYESGAHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + +++ I  +D RID YR+SG GGQ VNTTDSAVR
Sbjct: 184 RVPATESQGRIHTSAVTVAIMPEA-EEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTG+VV CQ E+SQHKNKA+A  +LR++L + E +K+         S+   G    
Sbjct: 243 VTHIPTGLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQRLEQEASRRSQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       VL+GDLD+     +A
Sbjct: 303 RIRTYNF-PQSRVTDHRINLTLYKLEAVLEGDLDELFDGLIA 343


>gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
 gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 201/344 (58%), Gaps = 4/344 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D      R   L+ ++    LW++  +A+++M E   +   +   +  ++ + D    LE
Sbjct: 69  DVKGLKMRFESLDERSSAGDLWEDANKARVVMAELAGVREELDAARAFEEHVSDAKTALE 128

Query: 75  LAL----EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           LA     + +   +L E   +++ +   +E  +   LL G+ D+  A ++++AGAGG ++
Sbjct: 129 LAEVGESDNEMSEMLCEAMASVEALDEALEQWELRRLLGGKYDALGAVVQIYAGAGGLDA 188

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMY  W EKR +     E  +GE  G+K+ATL + G +AYG+L  E+G HRL
Sbjct: 189 QDWTEMLERMYIGWCEKRGYGVRVTERQEGEGGGLKTATLEVDGRHAYGYLSSEKGTHRL 248

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP++ ++ R TSF+++ V P++ D  E+++ E D  I T R+SGAGGQ+VN  ++AV
Sbjct: 249 VRQSPFNKDAARQTSFAAVDVIPLLQDEDEVKVPEGDLEITTMRSSGAGGQNVNKLETAV 308

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+ ++ R+Q  N+  A   ++AKL  L  + R            +  WG+
Sbjct: 309 RIKHVPTGISVKAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQ 368

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIR+YVL PY+MVKD+RT +E +  + VL+G LD++M   L  K
Sbjct: 369 QIRNYVLHPYKMVKDVRTGVETSDVTRVLNGGLDEYMNGYLRWK 412


>gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1]
 gi|61214614|sp|Q6F9S2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 362

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 172/340 (50%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L+  +    + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + QE     + +  ++E       +     D+N AYLEV AG GG E+ 
Sbjct: 66  ESMLSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE R ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTGVVV+CQ+ERSQHKNKA+A  +L ++L   +   +E   + +            
Sbjct: 246 ITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQETATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|229020548|ref|ZP_04177293.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
 gi|229026769|ref|ZP_04183101.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228734492|gb|EEL85154.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228740768|gb|EEL91021.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
          Length = 358

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           + G+ D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEDKLDAEMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEINIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13]
 gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13]
          Length = 358

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 178/339 (52%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N + +   LN K     +  ++   K + +E   L   I      +  + +     E+
Sbjct: 9   LENLILKYEELNNKLSSEGITSDLDLFKKISKEHADLTPIIETYSGYKKLVKNIEEAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     QE  DN +   +  E   Q   +     D  + +LE+ AG GG ES  +A
Sbjct: 69  LSDPEMKEFAQEEIDNSKDEIINFESKLQTLLIPKDPNDDKNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE+  +  E +  ++    G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 ADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKINGDGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ +RSQH+NKAQA ++L AK+ + ++  + + +      K+ IG G    +
Sbjct: 249 EPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQI--QAQQSQRASERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       ++DGDL++ + A 
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDFIMDGDLEEMINAL 344


>gi|257126615|ref|YP_003164729.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
 gi|257050554|gb|ACV39738.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
          Length = 360

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 182/345 (52%), Gaps = 6/345 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V +   L     DP +  +  +     +    +D  +      ++R  +   L E 
Sbjct: 5   LDDVVLKHKELTELLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMESLKED 64

Query: 76  ALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +          + I    E  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LKTEKDAEMKEMMLEEIHSIEEEIPNLEEELKILLLPKDPNDDKNVIMEIRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LIKG  AY  LK E GVHR+ 
Sbjct: 125 LFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGHGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P +DD  E+EI+ SD +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K+         S+   G    
Sbjct: 245 ITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVESERRSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDGDLD+ + A +A ++
Sbjct: 305 KIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQ 348


>gi|307544472|ref|YP_003896951.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
 gi|307216496|emb|CBV41766.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
          Length = 363

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 185/342 (54%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L     DP +  +    +   RE   LD+ ++  ++ +    D      L
Sbjct: 9   LDTFAERFEELAALLADPEVIADQPRFRDYSREYAELDDLVAAWRDYRAVEEDIEAAESL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
           A ++ D  + +  S   +  + ++E  +   + LL      D+ + +LE+ AG GG E+ 
Sbjct: 69  A-DDADAEMRELASMERESGREKLEALETRLKQLLVPRDPDDAGNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE   +K E +    G++ G K     +KG   Y  LK E G HR+ 
Sbjct: 128 LFAGDLFRMYSRYAELHGWKVEIVSASHGDQGGYKELISRVKGEGVYARLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   +  EI+I  ++ R+DT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMPEAAEVGEIDIDPNELRVDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGR 310
           ITH+P+GVVV+CQ+ERSQHKN+A+A ++L A+L +     +R++ A+   S         
Sbjct: 248 ITHLPSGVVVECQEERSQHKNRAKAMSLLAARLKQAAQDSQRQQQADERRSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +IR+Y   P   V D R N+     SDV+ G+ LD+ ++  +
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLSDVVGGEGLDEVIEPLI 348


>gi|302024124|ref|ZP_07249335.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
          Length = 253

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 134/251 (53%), Positives = 172/251 (68%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + F  E L+   G+EA
Sbjct: 1   MTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEA 60

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GIKS TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IEIEI
Sbjct: 61  GIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEI 120

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            + + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q+ N+ +A  +L+AK
Sbjct: 121 RDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAK 180

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           LY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT  E      V+DGDL
Sbjct: 181 LYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDL 240

Query: 344 DDFMKATLAIK 354
           D F+ A L  +
Sbjct: 241 DGFIDAYLKWR 251


>gi|49188164|ref|YP_031417.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49480414|ref|YP_039322.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140231|ref|YP_086598.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118480364|ref|YP_897515.1| peptide chain release factor 1 [Bacillus thuringiensis str. Al
           Hakam]
 gi|165871326|ref|ZP_02215975.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167636684|ref|ZP_02394972.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170688145|ref|ZP_02879356.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|170709368|ref|ZP_02899781.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|177651841|ref|ZP_02934424.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217962818|ref|YP_002341396.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218906507|ref|YP_002454341.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225867310|ref|YP_002752688.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227818092|ref|YP_002818101.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228917938|ref|ZP_04081474.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930337|ref|ZP_04093341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936614|ref|ZP_04099408.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949050|ref|ZP_04111322.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229094441|ref|ZP_04225513.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|229124833|ref|ZP_04254011.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|229142072|ref|ZP_04270597.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|229187555|ref|ZP_04314695.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|229199455|ref|ZP_04326118.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|229601300|ref|YP_002869544.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|254686248|ref|ZP_05150107.1| peptide chain release factor 1 [Bacillus anthracis str. CNEVA-9066]
 gi|254724243|ref|ZP_05186027.1| peptide chain release factor 1 [Bacillus anthracis str. A1055]
 gi|254735257|ref|ZP_05192966.1| peptide chain release factor 1 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744460|ref|ZP_05202140.1| peptide chain release factor 1 [Bacillus anthracis str. Kruger B]
 gi|254755798|ref|ZP_05207830.1| peptide chain release factor 1 [Bacillus anthracis str. Vollum]
 gi|254762138|ref|ZP_05213984.1| peptide chain release factor 1 [Bacillus anthracis str. Australia
           94]
 gi|301056797|ref|YP_003795008.1| peptide chain release factor 1 [Bacillus anthracis CI]
 gi|49182091|gb|AAT57467.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49331970|gb|AAT62616.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973700|gb|AAU15250.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118419589|gb|ABK88008.1| bacterial peptide chain release factor 1 (bRF-1) [Bacillus
           thuringiensis str. Al Hakam]
 gi|164712993|gb|EDR18521.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167527884|gb|EDR90706.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170125716|gb|EDS94630.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|170667838|gb|EDT18590.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|172082545|gb|EDT67609.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217065190|gb|ACJ79440.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218537315|gb|ACK89713.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225787237|gb|ACO27454.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227005978|gb|ACP15721.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228584031|gb|EEK42186.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|228595922|gb|EEK53602.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|228641361|gb|EEK97667.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|228658624|gb|EEL14286.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|228688978|gb|EEL42805.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|228810623|gb|EEM56972.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823049|gb|EEM68887.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829323|gb|EEM74956.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841735|gb|EEM86846.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229265708|gb|ACQ47345.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|300378966|gb|ADK07870.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis
           str. CI]
 gi|324329278|gb|ADY24538.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 358

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|262375291|ref|ZP_06068524.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
 gi|262309545|gb|EEY90675.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
          Length = 362

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 169/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L    +   + +    D    
Sbjct: 6   RLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHNDLTEITNVWTKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + QE     + +   +E       +     D+N AYLE+ AG GG E+ 
Sbjct: 66  QAMLSDPDFKEMAQEEIKENKALIESLEADLNILMIPKDPNDANSAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K    LI G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLINGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    ++I+ +D RIDTYRASGAGGQHVN TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTSVDINPADLRIDTYRASGAGGQHVNKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       V++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELLDSL 344


>gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992234|gb|EEC58238.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
          Length = 363

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 115/358 (32%), Positives = 183/358 (51%), Gaps = 10/358 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +   G     ++ V R   +  +  +P +  +    + LM+E+  +   ++   E 
Sbjct: 1   MEISMEIFGR---LEDLVHRYEDITLELSNPDVVNDQKRFRDLMKEQNDITPIVNAYNEY 57

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAY 118
           +    +    L +  EE+D  + +   + L   K   E  +       L     D  D  
Sbjct: 58  KSCKQNIEDSLTMLDEENDEELKELAKEELNDSKKRAEELENELKILLLPKDPNDDKDII 117

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A  L RMYT +AE R++K E +   +    G+K    ++KG  AY
Sbjct: 118 VEIRAGAGGDEAALFAAELFRMYTHYAESRRWKVEVVNSDETGIGGMKEIEFMVKGQGAY 177

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   +S  R HTS +++ V P   + ++++I E D RID  RASG 
Sbjct: 178 SVLKYESGVHRVQRVPETESGGRIHTSTATVAVMPEA-EEVDVQIDEKDIRIDVMRASGN 236

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIAN 297
           GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK  +  A+
Sbjct: 237 GGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKAHDAEAD 296

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              S         +IR+Y   P   V D R  +       ++DGD+ + + A +A  +
Sbjct: 297 ARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQEIIDACIAADQ 353


>gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 278

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 155/268 (57%), Positives = 197/268 (73%), Gaps = 1/268 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +L+LA+E DD S+L++    L   + E+   +F  + S   D N  Y+E+ AG+GGTE+Q
Sbjct: 1   MLDLAVEADDESLLEDVQSELSTAEEELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLV
Sbjct: 61  DWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VV CQ +RSQH N+  AW  LRAKLYELE+QKR E A   E SK++IGWG Q
Sbjct: 181 LTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALEDSKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           IRSYVL     +KDLRT +E       L
Sbjct: 241 IRSYVLDDS-RIKDLRTGVEIQILVRFL 267


>gi|92113653|ref|YP_573581.1| peptide chain release factor 1 [Chromohalobacter salexigens DSM
           3043]
 gi|119361523|sp|Q1QXC6|RF1_CHRSD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91796743|gb|ABE58882.1| bacterial peptide chain release factor 1 (bRF-1) [Chromohalobacter
           salexigens DSM 3043]
          Length = 361

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L     +P +  +    +   RE   L+  I   +  +    D     ++
Sbjct: 9   LDGFQERFEELAALLAEPDVIADQARFRDYSREYAELEPLIEAWRSYRRTEDDLEAAEQM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +  +  +  +E      + LL      D+++ +LE+ AG GG E+ 
Sbjct: 69  -REDSDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK  ++ E +    GE+ G K     ++G N Y  LK E G HR+ 
Sbjct: 128 LFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V        E+E++ +D R+DT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGR 310
           ITH+P+G+VV+CQ+ERSQHKN+A+A  +L A+L +  +  +R++ A+   S         
Sbjct: 248 ITHLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQRQQQADTRRSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R N+      DV+ G+L + +   +
Sbjct: 308 RIRTYNF-PQGRITDHRINLTLYKLGDVMAGELGEVIDPLI 347


>gi|150388171|ref|YP_001318220.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
 gi|166977357|sp|A6TK43|RF1_ALKMQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149948033|gb|ABR46561.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
          Length = 357

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 186/349 (53%), Gaps = 12/349 (3%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      ++   L  K  DP +  + ++ + L++E   ++  +   +E +        
Sbjct: 1   MLDKLAFLQEKYEDLGEKISDPEIINDQVQWQKLIKEHSEIEPIVMKYREYKTTQQALGE 60

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAG 126
             E+  ++  D  + +     ++ ++  +    E  +   L +   D  +  +E+  GAG
Sbjct: 61  TKEIMHDKATDAELKEMAKMEVEELEESIVEMEEQLKVMLLPTDPNDDKNVIVEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A +L RMYTR+AE+  +K E + +++    G K    +IKG  AY  LK E G
Sbjct: 121 GDEAGLFAAVLFRMYTRYAERSGWKVEMMSLNESGVGGYKEVIFMIKGKGAYSQLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ RI   +S  R HTS +++ + P  +D  E+ I  ++ RID +R+SG GGQ VNTT
Sbjct: 181 AHRVQRIPTTESGGRIHTSTATVVIMPEAEDVGEVNIDTNELRIDVFRSSGNGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ  +SQ KNK +A  +L+++L  L+   +E+ A I +  ++++
Sbjct: 241 DSAVRITHLPTGLVVSCQDGKSQLKNKEKAMKVLKSRL--LDQMIQEQDAEISQDRRSKV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V D R N+        LDG++++ + + + 
Sbjct: 299 GTGDRSERIRTYNF-PQGRVTDHRINVTVYKLDAFLDGEINEMIDSLIT 346


>gi|254238595|ref|ZP_04931918.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
 gi|126170526|gb|EAZ56037.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
          Length = 360

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 176/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + +   +  +    +  Q   L     DS + +LE+ AG  G E+ 
Sbjct: 69  LKDS-DPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTCGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL +   Q+      I  + K  +G G  
Sbjct: 248 ITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLND--QQQAAAQQAIASTRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|293394608|ref|ZP_06638902.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
 gi|291422917|gb|EFE96152.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
          Length = 248

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 155/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS++VYP VD+ I+I+I+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFVYPEVDEDIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F
Sbjct: 181 YEMQKKNADKQALEDNKSDIGWGSQIRSYVLDDS-RIKDLRTNVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea sp. MED297]
 gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297]
          Length = 361

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 120/339 (35%), Positives = 174/339 (51%), Gaps = 7/339 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L      P +  +    +   +E   L+N +           D      L L
Sbjct: 11  ELTERYEELGLLLSQPDVISDQTAFRQYSQEYAELENVVQCFSRYTACEADIEAARGL-L 69

Query: 78  EEDDCSILQETSDNL---QRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +++D  + +   D L   + ++ E+ E  Q   L     D  + YLEV AG GG E+  +
Sbjct: 70  DDEDPDMREMGKDELASAEALREELDEQLQILLLPKDPNDHKNVYLEVRAGTGGDEAAIF 129

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           +  L RMY+R+AEK  ++ E L   +GE  G K     + G   Y  LK E G HR+ R+
Sbjct: 130 SGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRLSGERVYSQLKFESGAHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P  D+   IEI ++D R+DT+RASGAGGQHVN TDSA+R+T
Sbjct: 190 PETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDTFRASGAGGQHVNKTDSAIRLT 249

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQI 312
           H+PTG+VV+CQ ERSQHKNKA+A ++L AKL +  E     E A+  +S         +I
Sbjct: 250 HLPTGIVVECQDERSQHKNKARAMSLLAAKLKDAQESAAAREQADQRKSLVGSGDRSERI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   V D R N+      +V+ G LD  ++  L
Sbjct: 310 RTYNF-PQGRVTDHRINLTLYKLDEVIGGQLDHIIQPLL 347


>gi|283798430|ref|ZP_06347583.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|291073835|gb|EFE11199.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|295090782|emb|CBK76889.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium cf.
           saccharolyticum K10]
 gi|295115024|emb|CBL35871.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SM4/1]
          Length = 358

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 194/349 (55%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L  +  +P++ ++  + + LM+E+  L   +   K  +    D   
Sbjct: 1   MFDRLDDLLIRYEELMEELNNPYVVEDQKKFRKLMKEQADLAPIVEAYKNYKQAHQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            + L  EE D  + +   + L   K  +E  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SVALLEEESDEEMRELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY R+AE++++KTE + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFASELYRMYVRYAERKRWKTEIVSLNENGIGGFKEVVFMVTGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   +  +IEI  +DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEA-EEFDIEIDMNDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL++R+   +    S+   G
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELERRQSEESEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V + R  +       V+DG+LD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMDGELDELIDSLIAADQ 347


>gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75]
 gi|254790880|sp|B7UQ99|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75]
          Length = 360

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K + E  + +     L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|90022891|ref|YP_528718.1| peptide chain release factor 1 [Saccharophagus degradans 2-40]
 gi|119361599|sp|Q21FM3|RF1_SACD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89952491|gb|ABD82506.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharophagus
           degradans 2-40]
          Length = 360

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 178/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R + +     DP +  N  + + L RE   L+  I    E    L +      L
Sbjct: 9   LEHLAERFTEVGALMGDPDVISNQDKFRDLGREYAELEPVIKCYNEYNTVLGNIAEAKVL 68

Query: 76  ALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     D L+     ++      Q   L     D  + +LE+ AG GG E+ 
Sbjct: 69  ISDS-DPDMRAMGQDELKENEAALEPLELELQKLLLPKDPNDGKNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE + +K E +  + GE  G K     + G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAESKGWKVEIISENQGEHGGYKEIITRVVGQGVYSELKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+  E+ I+++D RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVMPEADEMAEVNINKADLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV+CQ ERSQHKN+A+A ++L ++L   +  + +  A    + K+ +G G  
Sbjct: 248 LTHIPTGVVVECQDERSQHKNRAKAMSLLASRLSMAQ--EEKAAAEQASARKSLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+      +V+ G L D ++  +
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYKLDEVMQGALGDVIQPLV 347


>gi|77920283|ref|YP_358098.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
 gi|119361572|sp|Q3A129|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77546366|gb|ABA89928.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           carbinolicus DSM 2380]
          Length = 356

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 173/342 (50%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +     DP +         L RE   L + ++  +E +    D     EL
Sbjct: 6   LEEVEDRFREVEGLLSDPQVVSQQKRFLELTREHAELSSVVAVYREYKRVSEDIEGNREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +     L  ++   E    Q + LL      D  +  LE+ AG GG E+ 
Sbjct: 66  LQDS-DPEMREMAKAELPELEAHREELAQQLKVLLLPKDPNDDKNVILEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +K E + + D E  G K    +I G   Y  LK E G HR+ 
Sbjct: 125 LFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMISGNRVYSQLKYESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + ++++I  +D RID YRASGAGGQHVN T+SAVR
Sbjct: 185 RVPETEAQGRIHTSACTVAVLPEA-EDVDVDIDPTDLRIDVYRASGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+PTGVVV CQ E+SQHKNKA+A  +L++++  L+    ++ A +    K+++G G  
Sbjct: 244 ITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRI--LDQVMADQQAQMAADRKSQVGSGDR 301

Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P     D R  +       ++ G+L + ++  
Sbjct: 302 SQRIRTYNF-PQGRCTDHRIGLTLYRLEGIMQGNLSELVEPL 342


>gi|229164277|ref|ZP_04292210.1| Peptide chain release factor 1 [Bacillus cereus R309803]
 gi|228619217|gb|EEK76110.1| Peptide chain release factor 1 [Bacillus cereus R309803]
          Length = 358

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+    E+    +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELEGQDKELSARLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
 gi|167667899|gb|EDS12029.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
          Length = 358

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 178/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+   R   ++ +  +P +  +  +   LM+E   L   +   +  +        
Sbjct: 1   MFDKLDSVAARYEEISRRLMEPDVTGDPEQYASLMKEYSRLTPIVEKYRAYRTAKDACDE 60

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAG 126
             E+  E   D  + +   + L   +  ++      +   L     D  +  +E+  GAG
Sbjct: 61  AREVLDESGVDREMRELAQEQLDENRAVLDQTAQELKILLLPRDPNDDKNVIVEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A +L RMYT +AE   ++ E +  ++ E  G K     I G  AY  LK E G
Sbjct: 121 GEEAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSITGEGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ V P   + +E E+   D +ID +R+SGAGGQHVN T
Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLPEA-EEVEFELDPRDLQIDVFRSSGAGGQHVNKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SA+R+TH+PTG+VV+CQ ERSQ+KNK +A  +LRA+L ++++  RE+   I    + ++
Sbjct: 240 SSAIRVTHLPTGMVVECQDERSQYKNKDRALKVLRARLLDIKV--REQNDKIATERRLQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       VL+GDL +   A +   +
Sbjct: 298 GTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSVLNGDLAELFDALMTFDQ 348


>gi|292493886|ref|YP_003529325.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
 gi|291582481|gb|ADE16938.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
          Length = 363

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 181/342 (52%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   L     +P +  +  + +   +E   L+  I   ++ ++          L
Sbjct: 9   LENLAERQQELAALLAEPEIANDQKQFREFSQEYAQLEPVIGCFRDFEETQNALNEAKAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + +   + ++E    + ++LL  S   D  + +LE+ AG GG E+ 
Sbjct: 69  LKD-QDPELRTLAQEEVAEAERKLEQLDQELQTLLLPSDPNDKRNIFLEIRAGIGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ LLRMY R+AE+R ++ E +    GE  G K   + I G  AY  LK E G HR+ 
Sbjct: 128 LFASDLLRMYLRYAEQRGWRKEIISDSPGEYGGHKEVIIRIVGEGAYSRLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  ++  +I+I+ SD RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPQTESQGRIHTSACTVAIMPEAEEIDDIDINLSDLRIDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKN+ +A ++LRAKL   E  K   E A    S         
Sbjct: 248 ITHLPTGIVVECQDERSQHKNRVRAMSLLRAKLKSKEETKLAAEEAATRRSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      ++L+G L+  +   +A
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLDEILEGHLNAVIDPLIA 348


>gi|229087819|ref|ZP_04219935.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
 gi|228695494|gb|EEL48363.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
          Length = 358

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 189/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  + + +   +E +D   +
Sbjct: 1   MNDVLDRLQAVEDRYEKLNELLSDPEIISDSNKLREYSKEQSDIQDTVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+  + E+ E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEEKLDAEMRDMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|300361282|ref|ZP_07057459.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
 gi|300353901|gb|EFJ69772.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
          Length = 270

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 137/260 (52%), Positives = 182/260 (70%)

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A     K E
Sbjct: 3   SLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHDLKFE 62

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
             +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V P
Sbjct: 63  IEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIP 122

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+
Sbjct: 123 EIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNR 182

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A NMLRAKL++LE +K+++     + ++ EIG+G QIRSYV  PY MVKD RTN E +
Sbjct: 183 ETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFETS 242

Query: 334 SPSDVLDGDLDDFMKATLAI 353
             + V+DG LD+F+ A L  
Sbjct: 243 DVNGVMDGKLDNFIYAYLQW 262


>gi|317048556|ref|YP_004116204.1| peptide chain release factor 1 [Pantoea sp. At-9b]
 gi|316950173|gb|ADU69648.1| peptide chain release factor 1 [Pantoea sp. At-9b]
          Length = 360

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +E Q    D     E+
Sbjct: 9   LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLSDVTRCFREWQQVQEDVETA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  + +     +  Q   L     D    ++EV AG GG E+ 
Sbjct: 68  LL--DDPEMREMAQEELKTSREKREVLEQQLQVLLLPKDPDDERPCFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  +DGE  G K     + G  AYG  K E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEARRWQVEIISSNDGEHGGYKEVIARVTGDGAYGRFKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPELPEAELPDINPGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR E  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRHEAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIEPIV 345


>gi|15599860|ref|NP_253354.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
 gi|107099668|ref|ZP_01363586.1| hypothetical protein PaerPA_01000686 [Pseudomonas aeruginosa PACS2]
 gi|12231016|sp|P42806|RF1_PSEAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9950920|gb|AAG08052.1|AE004880_8 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
          Length = 360

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + +   +  +    +  Q   L     DS + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV+CQ+ERSQHKN+A+A   L AKL +   Q+      I  + K  +G G  
Sbjct: 248 ITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLND--QQQAAAQQAIASTRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|294787740|ref|ZP_06752984.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
 gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
          Length = 358

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 187/346 (54%), Gaps = 8/346 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            L D   N   RL  +      P    N+   + L +E   L   +   ++ +    D  
Sbjct: 4   SLLDKLQNLAHRLEEVTALLGSPEATANMDNYRKLNQEHAELTPIVETYQQYRQAESDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTE 129
              E+  + +      E  ++ +    +++++  + LL  +AD   + ++E+ AG GG E
Sbjct: 64  DAQEMLSDPEMKDFAAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++TE +   + +  G K   + + G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  EI+++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPTTESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G
Sbjct: 244 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQ--KREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+       V+DGD+++   A +A
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITSALIA 346


>gi|253990004|ref|YP_003041360.1| peptide chain release factor 1 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781454|emb|CAQ84617.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica]
          Length = 360

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +  +  K  +    D     E+
Sbjct: 9   LEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTTCFKTWRTVQDDLKAA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + ++  K       +  Q   L     D  + +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEEIKDAKARNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  +DGE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWKIEVMSANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EIS SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVLPEIPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR+E  A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQEAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|30265352|ref|NP_847729.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42784501|ref|NP_981748.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47530891|ref|YP_022240.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|222098801|ref|YP_002532859.1| peptide chain release factor 1 [Bacillus cereus Q1]
 gi|46576768|sp|Q81JX1|RF1_BACAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214595|sp|Q630R9|RF1_BACCZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214623|sp|Q6HAV4|RF1_BACHK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214641|sp|Q72XC2|RF1_BACC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790861|sp|B9IRW2|RF1_BACCQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30260030|gb|AAP29215.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42740433|gb|AAS44356.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47506039|gb|AAT34715.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|221242860|gb|ACM15570.1| peptide chain release factor 1 [Bacillus cereus Q1]
          Length = 355

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    L+  +  + E  +   +     D  +  +EV   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|303236882|ref|ZP_07323461.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
 gi|302483050|gb|EFL46066.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
          Length = 371

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 118/357 (33%), Positives = 210/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +++ L    + D           +T+ P  W++   A+  M++ + ++  I   + ++ 
Sbjct: 12  ARVDALNHYLNIDKKKIEFEEEQLRTQAPDFWEDAERAQEQMKKVKGIEKWIKGYENVKT 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  +  +  +   +E      ++      ++  ++E  +  ++L  E D  +  +++++G
Sbjct: 72  QADELQLAFDFYKDE--LVTEEDVDTAYAKVITDIENLELMNMLRQEEDPMECVMKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA+ML+RMY R+ E+  +K    +I +G+EAGIKS T+  + G  A+G+LK 
Sbjct: 130 AGGTESQDWASMLMRMYMRYGEQHGYKVTIADIQEGDEAGIKSVTMKFEGGEYAFGFLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P++DD+IE+ +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLIDDTIEVFVDPARVSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ ++           ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+SK +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 310 QAKVEASKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDGFIKAYLM 365


>gi|30023360|ref|NP_834991.1| peptide chain release factor 1 [Bacillus cereus ATCC 14579]
 gi|206970257|ref|ZP_03231210.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218236058|ref|YP_002370106.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228924065|ref|ZP_04087341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955577|ref|ZP_04117579.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961593|ref|ZP_04123202.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229051000|ref|ZP_04194549.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|229072796|ref|ZP_04205995.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|229082544|ref|ZP_04215007.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|229112743|ref|ZP_04242276.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|229130579|ref|ZP_04259535.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|229147870|ref|ZP_04276211.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|229153493|ref|ZP_04281671.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|229181577|ref|ZP_04308903.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|229193581|ref|ZP_04320525.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|29898921|gb|AAP12192.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus cereus
           ATCC 14579]
 gi|206734834|gb|EDZ52003.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218164015|gb|ACK64007.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228589886|gb|EEK47761.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|228601945|gb|EEK59440.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|228630097|gb|EEK86748.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|228635520|gb|EEK92009.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|228652918|gb|EEL08800.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|228670724|gb|EEL26035.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|228700976|gb|EEL53499.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|228710287|gb|EEL62262.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|228722377|gb|EEL73773.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|228798075|gb|EEM45079.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804105|gb|EEM50722.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228835555|gb|EEM80920.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 358

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+     + E  +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
 gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
          Length = 360

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       + E      R+       Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           I TG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 ISTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346


>gi|288554407|ref|YP_003426342.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
 gi|288545567|gb|ADC49450.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
          Length = 356

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +   R + LN    DP +  +  + +   +E+  ++  +   +E ++   +  D
Sbjct: 1   MLDRLQSVEDRYNRLNELLSDPDIISDSKKLREFSKEQSDIEETVQAYREYKEVVSQYKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+++  ++++E  D L   + E+E   +   L     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDDEMYAMVKEEMDELSTRQEELEARLKILLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L +MY+R+AE + +KTE +E    E  G K     + G  AY  LK E G 
Sbjct: 121 DEAQLFAGDLYKMYSRFAEAQGWKTEVIEATSTELGGYKEIIFSVNGAGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+EI E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTESGGRIHTSTATVAVLPEA-EEVEVEIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYD--KVQREVQAEYDQNRKLAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTIQKLEQILQGKLDEVIDALIVEEQ 347


>gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
 gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
 gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
 gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
 gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
 gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
 gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
 gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
          Length = 359

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 174/344 (50%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    +  ++      D     EL
Sbjct: 9   LDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D ++  +  +E  +       L     D   A+LE+ AG GG E+ 
Sbjct: 69  LS---DPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY ++ + + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V+    +EI+ SD RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVV +CQQERSQH NK +A  ML A++ + ++  + +I    +  +  +G G  
Sbjct: 246 ITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV--QAQIDATSDMRRNLVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +++GDL + + + L 
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLR 346


>gi|261250316|ref|ZP_05942892.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
 gi|260939432|gb|EEX95418.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
          Length = 263

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 151/261 (57%), Positives = 200/261 (76%), Gaps = 1/261 (0%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  ++ ++E  +F  + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK
Sbjct: 1   MAELEAKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFK 60

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++
Sbjct: 61  TEVIEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFI 120

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YP +DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHK
Sbjct: 121 YPEIDDNIQIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 180

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK QA   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E
Sbjct: 181 NKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVE 239

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
             +   VLDGDLD F++A+L 
Sbjct: 240 NRNTQAVLDGDLDKFIEASLK 260


>gi|198274326|ref|ZP_03206858.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
 gi|198272816|gb|EDY97085.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
          Length = 371

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 135/357 (37%), Positives = 208/357 (58%), Gaps = 11/357 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    D +    ++     +T+ P  W +   A+  M++ + L   I+  +E++
Sbjct: 11  KERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKALQQWITGYQEVK 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +   +E      +E  +   +    VE  + +++L  EAD  D  L++++
Sbjct: 71  TLADELQLSFDFYKDE--LVTEEEVDEAYSKAISAVEELELKNMLRSEADQMDCVLKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWA+ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LKG
Sbjct: 129 GAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLKG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+V
Sbjct: 189 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNV 248

Query: 244 NTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +      TG    ++++  + R Q KNK  A   LR+ LY+ ELQ R E 
Sbjct: 249 NKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEE 308

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 309 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|331000229|ref|ZP_08323913.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
 gi|329572395|gb|EGG54048.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
          Length = 280

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 150/278 (53%), Positives = 205/278 (73%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EEDD + L+    ++  +K EVE+ +F+ + + E D  + +LE+ AGAGGTE+QDWA
Sbjct: 1   MAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML RMY ++AE++ FK E +E  +G+ AGIK  T+ I G  AYGWL+ E G+HRLVR S
Sbjct: 61  SMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+  TDSAVRITH
Sbjct: 121 PFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+V   Q  RSQH+NK +A  +L+++LYE EL+KR+      E +K++I WG QIRS
Sbjct: 181 IPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     VKDLRTN+E  + + VLDG L+ F++A+L 
Sbjct: 241 YVL-DQSRVKDLRTNVETGNTTAVLDGALESFIEASLK 277


>gi|153809900|ref|ZP_01962568.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
 gi|149834078|gb|EDM89158.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
          Length = 359

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 196/349 (56%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ + R   +  +  +P +  N    + LM+E+  L   +   KE +D    + D
Sbjct: 1   MFDKLEDLLVRFEEVLNELGEPGVTDNQERFQKLMKEQSELQPIVDAYKEYKDNKETIQD 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L +LE   +E+   +L +E SD  +R++   +  +   L     DS +  +E+ AGAGG
Sbjct: 61  SLSMLEEEKDEEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE + +++    G K  T +I+G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMPEA-EEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       VL GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHRLDAVLGGDLDEILDSLIAADQ 347


>gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
 gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
          Length = 357

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   L ++ ++P +  N    + LM+E+  L   +   KE +        
Sbjct: 1   MFDKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   D L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLLMLEEESDEEMRELAKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++KTE + I +    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAIMPEA-EEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LE++K++        S+   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQASEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       VL+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIAADQ 347


>gi|317504105|ref|ZP_07962107.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
 gi|315664777|gb|EFV04442.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
          Length = 376

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 126/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L      D           +T+ P  W +   A+  M++ + ++  +      
Sbjct: 10  IIERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGIEKWLKGYNAC 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   +  +  +     D+    +E   +  +    VE  + +++L  E D+ DA L+++
Sbjct: 70  RELADELQLAFDFYK--DNMVTEEEVDTDYAKAVKAVEDLELKNMLRQEEDAMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RW+E   +  +  +I DG+EAGIKS T+ I+ G  AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYNVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L+K++
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKKQ 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+ K +I WG QIRSYV    + VKD RT  + +    V+DG LD F+KA L 
Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365


>gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
 gi|28201874|sp|Q8KG45|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
          Length = 357

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   +   +  +  DP +  +    + L +E   L   +    E          
Sbjct: 1   MFDKLQSIKDKFQTIEQQLSDPEVVADQNRFRKLNKEYSSLKEIVRAYDEWSRTKKQLDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +   E+D  +     +    ++  +   +       L   EADS +A +E+ AG GG
Sbjct: 61  AHSMQKNENDPEMRALVEEEAGELQERLPKLEQQLKILLLPKDEADSRNAIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ +  + LE+ +G   G  K  +L + G N YG LK E G
Sbjct: 121 DEAGLFAADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHNVYGILKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D  IDT+R+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLPEA-EEVDVEIRKEDLLIDTFRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY+L++ ++++       S    
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRADLRRSMVTT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R      +   ++ G+LD  ++A 
Sbjct: 300 GDRSAKIRTYNF-PQSRVTDHRIGFTSHALPQIMQGELDPLIEAL 343


>gi|58579040|ref|YP_197252.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617098|ref|YP_196297.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Gardel]
 gi|58416710|emb|CAI27823.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417666|emb|CAI26870.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 251

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 148/249 (59%), Positives = 194/249 (77%), Gaps = 1/249 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGI 165
           + S EAD ND ++E+ +GAGGTES DW+NMLLRMY RWAE    FKT+ +   DGEE G+
Sbjct: 1   MFSDEADQNDCFIEIQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGV 60

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSA + + G NAYGW K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I +
Sbjct: 61  KSAIIKVIGYNAYGWSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHD 120

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N  +A+N+LR++LY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLY 180

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +L+LQ++E+      S + +IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDGDLD 
Sbjct: 181 QLKLQEKEKKMAQEHSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDA 240

Query: 346 FMKATLAIK 354
           F+ ATL  K
Sbjct: 241 FIIATLTKK 249


>gi|303228461|ref|ZP_07315294.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303230754|ref|ZP_07317501.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514514|gb|EFL56509.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302516963|gb|EFL58872.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 360

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 188/345 (54%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L  +  DP +     E + L R+   L   +   +E +  L      +E+  +
Sbjct: 9   IEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGIDEAMEVIED 68

Query: 79  ----EDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
               E+   + QE    L+  K E+E K Q   L     D  +  +E+  GAGG E+  +
Sbjct: 69  KTMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+
Sbjct: 129 AGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P + + ++IEI++ D +IDTYRASGAGGQH+N T+SAVRIT
Sbjct: 189 PATETQGRVHTSTVTVAVLPEM-EDVDIEINDKDLKIDTYRASGAGGQHINKTESAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ +RSQ +N+ +A  +LRAKL +    ++E  A++    K+++G G    
Sbjct: 248 HLPTGIVVACQDQRSQLQNREKAMRVLRAKLQD--KAEQEATASMAADRKSQVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
 gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
          Length = 358

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 111/341 (32%), Positives = 174/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +          +++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LSQLADRLEEVTHLLASEAATRDMDAFRKLTREHAELTPVVETYQAYRQCESDLATATEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     Q   D  +     ++   Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LADPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +   + +  G K   + + G  A+  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  ++  E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA A  +L A++Y+++L  R +  ++    K+ IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHANKASAMQVLAARIYDIQL--RAQQQSVAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKLDQVMDGDLFELTDALIA 346


>gi|149907580|ref|ZP_01896327.1| peptide chain release factor 1 [Moritella sp. PE36]
 gi|149809250|gb|EDM69179.1| peptide chain release factor 1 [Moritella sp. PE36]
          Length = 362

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 187/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L +E   L+  +S  KE QD   D     E+
Sbjct: 9   LEALIERHEEVQALLGEPEIISDQDRYRALTKEYSQLEELVSCFKEYQDAKEDFESAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   +  +  K  V    +  +   L     DSN+ +LE+ AGAGG E+ 
Sbjct: 69  LKDE-DPDMREMAVEEYKESKATVARVSDELEVLLLPRDPNDSNNCFLEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++   + + + ++ G K   + ++G   +G +K E G HR+ 
Sbjct: 128 IFAGDLYRMYSRYAEKKGWRLTIMNLSNSDQGGYKEVIVKMEGEAVFGTMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V +   I I+ +D ++DT+RASGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVVVMPEVPEVDAIVINTADLKVDTFRASGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIPTG VV+CQ ERSQHKN+A+A ++L+A++   E +K R E  +   S         
Sbjct: 248 ITHIPTGTVVECQDERSQHKNRARAMSILQARIQAAEDEKARLEEESTRRSLVASGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++G+LD  ++  +
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLNEVMEGELDVLIQPII 347


>gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
 gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
          Length = 358

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 177/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
             + +      E      + K++    + + LL      D  + ++EV AG GG E+  +
Sbjct: 69  LSDPEMKDFATEEI-EAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+
Sbjct: 128 AGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRIT
Sbjct: 188 PATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    
Sbjct: 248 HLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|296505754|ref|YP_003667454.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
 gi|46576766|sp|Q812I4|RF1_BACCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|296326806|gb|ADH09734.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
          Length = 355

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    L+     + E  +   +     D  +  +EV   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|260911088|ref|ZP_05917720.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634786|gb|EEX52844.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 394

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 126/359 (35%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D     L     +T+ P  W +   A+  M++ + ++  I   KE+
Sbjct: 32  IQERAEALHRYLDIDRKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV 91

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E      +E  ++ ++    +E  +  ++L  + D  D  L+++
Sbjct: 92  RQATDELQLAFDFYHDE--MVTEEEVDEDYRKAITAIENLELMNMLRQKEDPMDCVLKIN 149

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RWAE    +     + +G+EAGIKS T+ I+ G  AYG+L
Sbjct: 150 SGAGGTESQDWAQMLMRMYMRWAEAHGHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 209

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ
Sbjct: 210 KSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 269

Query: 242 HVNTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR 
Sbjct: 270 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 329

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN +      V+DG +DDF+KA L 
Sbjct: 330 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDDFIKAYLM 387


>gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 288

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 136/276 (49%), Positives = 189/276 (68%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D ++LQE    + ++  E++  + + LLSG  D+  A L ++AGAGGT++QDWA ML+
Sbjct: 4   ETDEALLQEAESTVTKLNRELDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLM 63

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++
Sbjct: 64  RMYTRWAEDHGYKVSLAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNA 123

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + + P +D S+++EI E D  I T RA G GGQ+VN  ++AVRI H+PTG
Sbjct: 124 NGKRQTSFAGVEIMPQLDHSVQLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTG 183

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + V+C +ERSQ +NK +A   L+AKL  +  +++ +          E  WG QIR+YV  
Sbjct: 184 IAVRCTEERSQLQNKDKALARLKAKLLVIAREQKAQEVAEIRGDMVEASWGNQIRNYVFH 243

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PYQMVKDLRTN+E T+ SDV+DGDLD F++A L  +
Sbjct: 244 PYQMVKDLRTNVETTAISDVMDGDLDSFIQAYLRQE 279


>gi|110640072|ref|YP_680282.1| peptide chain release factor 1 [Cytophaga hutchinsonii ATCC 33406]
 gi|119361529|sp|Q11NS4|RF1_CYTH3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110282753|gb|ABG60939.1| bacterial peptide chain release factor 1 (bRF-1) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 359

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 101/340 (29%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +     DP++  ++     L +E + L+  +    + ++ L +     ++
Sbjct: 5   LEAIKSRFDEVAEAILDPNIMSDMKRYASLNKEYKELNKIVEVYAQYKNILDNIESSKKV 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D    +   + L+ + ++ +  +       +     DS +  LE+  G GG E+ 
Sbjct: 65  LSVEKDPDFREMAKEELETLAVQKDDIELVIKELLIPKDPNDSKNIILEIRGGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY R+ ++  +K E ++  +G   G K     I G + YG LK E GVHR+ 
Sbjct: 125 IFAGDIFRMYQRYCDRMGWKMELIDATEGTSGGYKEIICGISGEDVYGKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P V + ++++++ +D R DT+ +SG GGQ VNTT SA+R
Sbjct: 185 RVPATETQGRIHTSAASVAVLPEV-EELDVQLNMNDIRKDTFCSSGPGGQSVNTTYSAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +THIP+G VVQCQ E+SQ KN  +A  +LR+++YE+E +K++ E+     S         
Sbjct: 244 LTHIPSGTVVQCQDEKSQIKNFEKALKVLRSRIYEIEYKKQQDELGKERNSMIGSGDRSD 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R      +   V+DG++DDF++  
Sbjct: 304 KIRTYNY-PQSRVTDHRIGHTVHNLPAVMDGNIDDFIEEL 342


>gi|311033344|ref|ZP_07711434.1| peptide chain release factor 1 [Bacillus sp. m3-13]
          Length = 356

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E +   ++L D
Sbjct: 1   MFDRLQAVEMRYEKLTELLSDPEVISDTKKLREYSKEQSDIQETVEAYREYKAVKEQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  +  +  +    LL     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDADMREMVKEEIAELEEQQENLADRLHILLLPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEAQGWKTEVMEAASTGVGGYKEIIFMITGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI + D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EEVEIEIHDKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPT  VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A    + K  +G
Sbjct: 240 SAVRLTHIPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQREVQAEYDANRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G L + + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLQEVIDALIMEDQ 347


>gi|254491165|ref|ZP_05104346.1| peptide chain release factor 1 [Methylophaga thiooxidans DMS010]
 gi|224463678|gb|EEF79946.1| peptide chain release factor 1 [Methylophaga thiooxydans DMS010]
          Length = 362

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 187/341 (54%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V R   +     DP    +  + + L +E   L+  +S     +  L   +    L
Sbjct: 9   LESLVDRHEEIAGLLADPDTMADQNKFRTLSQEYAQLEPVVSNFTAYRHTLS-AIEDANL 67

Query: 76  ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEEDD  + +   + L + +          Q   L     D  + +LE+ AG GG E+ 
Sbjct: 68  MLEEDDAEMREMAREELNQAEQTQEELELSLQKLLLPKDPNDQRNIFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE R++K E +   +GE  G K     I G  AY  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSKYAEVRRWKVEVINAQEGEHGGYKEMICRIVGEGAYSRLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD+   ++I+ +D R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAILPEVDEIDAVDINPADIRVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A ++L++++   ++QK+E E A   +S         
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAEQVQKQEAEQAETRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R N+     +++++GDLD  ++  +
Sbjct: 308 RIRTYNY-PQGRITDHRINLTLYKLNEIVEGDLDQVIEPLI 347


>gi|229826190|ref|ZP_04452259.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
 gi|229789060|gb|EEP25174.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
          Length = 357

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 174/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +  +        +  + + LM+E+  L   +   K  +         L +
Sbjct: 5   IETLAGRYKEVTDELASGMAAADPNKFRNLMKEQSDLQPIVEKYKAYKANNEQIEDCLRM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + L   K  V   + E     L   + D  +  +E+ AG GG E+ 
Sbjct: 65  ISEESDPELKELAREELAEAKAAVPEFEKELKVLLLPKDKNDDKNVIVEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L RMY ++AE  ++K E L  ++    G K  T LI G  A+  LK E G HR+ 
Sbjct: 125 IFASELYRMYCKYAENNRWKPEILSFNENGLGGFKEVTFLINGKGAFSKLKYESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +SN +  TS +++ + P   + +++ I  +D + D +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPVTESNGKLQTSAATVAILPEA-EEVDVNIDPNDIKFDVFRASGNGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+V+ CQ E+SQ KNK +A  +LR++LYELE    +  A    + K+++G G  
Sbjct: 244 LTHIPTGIVISCQDEKSQLKNKDKAMKVLRSRLYELE--CEKAHAEEAANRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R      +   V+ GDL + ++  +   +
Sbjct: 302 SEKIRTYNF-PQGRVTDHRIKFTTHNIDGVMGGDLTEIIENLIVADQ 347


>gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
 gi|238693068|sp|B4E6U6|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
          Length = 360

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 181/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDEAAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D ++  +  +   + E     L     D  + +LE+ AG GG ES 
Sbjct: 69  LA---DPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A + 
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVT 346


>gi|258513428|ref|YP_003189650.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777133|gb|ACV61027.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 355

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 182/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L     DP +  +    +  ++    + + ++  +E +    +     EL
Sbjct: 5   LQKIEERYEELGDLMGDPEVMADHSRWQQYVKAHADMQDIVNVYREYRQLDQEVSDAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D    +     L+ +  +    V+  +   L     D  +  LEV AG GG E+ 
Sbjct: 65  LKDKLDEDFREMVELELEELSEKKEELVQKLKLLLLPKDPNDDKNVILEVRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AEK+ ++TE L+ +  +  G K    +I+G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYTRYAEKQGWRTEVLDANYTDIGGFKEVVCMIEGKGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I+ +D RID + ++G GGQ VNTT SAVR
Sbjct: 185 RVPSTESGGRIHTSAATVAVLPEA-EEVEIDINPNDLRIDVFCSTGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           ITH+P+G+VV CQ E+SQHKNK +A  +LRA+L +L E ++R E+A+  +S         
Sbjct: 244 ITHLPSGLVVSCQDEKSQHKNKDKAMRVLRARLKDLAESEQRSELASTRKSMVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +       VL G++D+ ++A +   +
Sbjct: 304 RIRTYNF-PQNRITDHRIGLTTHRMPAVLMGEMDEIIEALITTDQ 347


>gi|120602348|ref|YP_966748.1| peptide chain release factor 2 [Desulfovibrio vulgaris DP4]
 gi|120562577|gb|ABM28321.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           vulgaris DP4]
          Length = 310

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 158/300 (52%), Positives = 206/300 (68%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  I+ ++ ++    D    L LA E++    L+   + + R++  +E  +   LLSG+
Sbjct: 2   LEGEINRLEALETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGK 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D   A LE+H GAGGTE+QDWA MLLRMY RWA+   +KTE L+  DG+EAGIKS TL 
Sbjct: 62  EDRFAALLEIHPGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I GPNAYG LKGE+G+HRL+RISP+D++ RRHTSF+S+ V P V   I+IEI ++D RID
Sbjct: 122 IAGPNAYGLLKGERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +R+SG GGQ VNTT SAVR+THIPTG+V QCQ E+SQH NK  A  +LR +LYELEL+K
Sbjct: 182 VFRSSGPGGQSVNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EE       +K  IG+G QIR+Y LQPY++VKD RTN E      VLDG LD  ++  L
Sbjct: 242 LEEEKKAQYGAKDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 301


>gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
 gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
          Length = 362

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLSDRYEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWAKYRQAEADIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + QE     + +   +E       +     D+N AYLE+ AG GG E+ 
Sbjct: 66  EAMLSDPDFKEMAQEEIRENRALIESLESQLNILMIPKDPNDANAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE   ++ E L  ++GE  G K     + G   YG +K E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRVDGDGVYGRMKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD    ++I+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A ++L ++L   +   +E   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMSLLVSRLENAKRAAQESATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL++ + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLNELLDSL 344


>gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054]
 gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424]
 gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
 gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|119361514|sp|Q1BSB1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223531|sp|A0K437|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688554|sp|B1JUS4|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia AU 1054]
 gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia HI2424]
 gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
          Length = 360

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 181/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D ++  +  +   + E     L     D  + +LE+ AG GG ES 
Sbjct: 69  LA---DPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A + 
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVT 346


>gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
          Length = 359

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 174/344 (50%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    +  ++      D     EL
Sbjct: 9   LDQMVDRFEEVTVLLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D ++  +  +E  +       L     D   A+LE+ AG GG E+ 
Sbjct: 69  LS---DPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY ++ + + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V+    +EI+ SD RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVV +CQQERSQH NK +A  ML A++ + ++  + +I    +  +  +G G  
Sbjct: 246 ITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV--QAQIDATSDMRRNLVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +++GDL + + + L 
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLR 346


>gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638]
 gi|166977363|sp|A4WBC6|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp.
           638]
          Length = 360

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAATIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + LQ  K   E  + +     L     D  +A++EV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L +++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      ++++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEIMEGKLDSLIEPIV 345


>gi|332829242|gb|EGK01896.1| peptide chain release factor 1 [Dysgonomonas gadei ATCC BAA-286]
          Length = 361

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 172/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP +  ++     L +E + L+       E +  L +      +
Sbjct: 10  LDTLVMRFEEIGKLITDPSVIADMKRYVKLNKEYRDLEKISIARNEYKQLLTNVEEAKNI 69

Query: 76  ALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + L           E  +   + +   DS +A +E+  G GG E+ 
Sbjct: 70  LDSENDAELREMAREELDTANVRLPELEEEIKLLLVPADPEDSKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + ++TE   + +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 IFAGDLYRMYIKYCELKGWRTEITSLTEGTSGGYKEVIFTVTGEGVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI+ +D  + T R+SGAGGQ+VN  ++ V+
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEA-EEVDVEINPADIEMQTARSSGAGGQNVNKVETKVQ 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           +TH P+G+VV CQQ RSQ  N+  A  MLR KLY++EL K + EIA+  ++  +      
Sbjct: 249 LTHKPSGLVVVCQQARSQLANRELAMQMLRTKLYDIELSKYQAEIASKRKTMVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N+   + S V+DG++   +   +  +
Sbjct: 309 KIRTYNY-PQGRVTDHRINLTLYNLSGVMDGEIQPIIDQLIIAE 351


>gi|288929843|ref|ZP_06423686.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288328944|gb|EFC67532.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 372

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 128/359 (35%), Positives = 205/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D+    L     +T+ P  W +   A+  M++ + ++  I   KE+
Sbjct: 10  IQERAEALHRYLDIDHKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     DD    +E  ++ ++    VE  +  ++L  + D  D  L+++
Sbjct: 70  RQAADELQLAFDFYH--DDMVTEEEVDEDYRKAITAVENLELMNMLRQKEDPMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RWAE    +     + +G+EAGIKS T+ I+ G  AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYMRWAESHGHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 247

Query: 242 HVNTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN +      V+DG +DDF+KA L 
Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDDFIKAYLM 365


>gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18]
 gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18]
          Length = 359

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 183/349 (52%), Gaps = 13/349 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD   +   R   L +   DP +  N  E + L +E   L   I+  +E +  L D  
Sbjct: 2   SMFDRIADLETRFEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADIG 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAG 126
              EL  E  D  + +     L+ ++   E  + E     L     D  +  LE+ AG G
Sbjct: 62  DNRELLKE-PDQEMREMAQAELESLEERREQLESEIKVLLLPKDPNDDKNVVLEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ES  +A  L RMY+R+AE  +++ E +   + E+ G K    L++G   +  LK E G
Sbjct: 121 GDESALFAGDLFRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS  ++ V P   + ++I+I+ +D +ID YR+SGAGGQHVNTT
Sbjct: 181 THRVQRVPETEAQGRIHTSACTVAVMPEA-EDVDIDINPADLKIDVYRSSGAGGQHVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG VV CQ+ERSQ KN+A+A  +L++++ +  L   E+ A +    K+++
Sbjct: 240 DSAVRITHIPTGTVVACQEERSQIKNRAKAMKVLKSRILDNILM--EQNAKLAADRKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   + D R  +       ++ GD+ +   +  A
Sbjct: 298 GSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEIADSLRA 345


>gi|323490903|ref|ZP_08096098.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
 gi|323395383|gb|EGA88234.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
          Length = 359

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   +   R   LN    DP +  +  + +   +E+  L   +   +E +D   +L +
Sbjct: 1   MFDRLQSVEDRYDRLNELLSDPDIVSDTNKLRDYSKEQSDLQETVETYREYKDLTTQLTE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGG 127
              + +  ++ D   +++E  + L++    VE +  + L      D  +  +E+   AGG
Sbjct: 61  AKAMFDEKMDADMREMVKEEVNELEQQVSVVEERLHKLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE   +K + ++ +     G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAGDLYRMYTRFAESNGWKIQVMDSNPTGLGGFKEIVFMITGKGAYSKMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V + +E++I E+D R DTY +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEV-EEVEVDIHENDIRTDTYASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PT  VV CQ E+SQ KNKA A  +LRA++Y  E  ++E  A      K+ +G
Sbjct: 240 SAVRLTHLPTNTVVTCQDEKSQIKNKASAMKVLRARVY--EKFQQEAQAEYDAVRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G +D+ + A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKMDEIVDALIVEEQ 347


>gi|78221601|ref|YP_383348.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
 gi|119361544|sp|Q39YQ1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78192856|gb|ABB30623.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           metallireducens GS-15]
          Length = 355

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 185/345 (53%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +    R   L +    P +  N  E + L RE   L   +   +  +  L +   
Sbjct: 1   MFDKIEELEIRYQELESLLAVPTVIANQPEFRKLSREHNDLTGLVEAYRRYKKVLAEIEG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   + +   ++L+R + E+E   +   L     D  +  LE+ AG GG ES
Sbjct: 61  NRELLADPEMKEMAEAELEDLERQQEELEGEIKLLLLPKDPNDDRNVILEIRAGTGGDES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+ ++K E +   + E  G K    LI+G   +  LK E G HR+
Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALIEGQAVFAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + IEI+I+  D +ID YRASGAGGQHVN T+SAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAVLPEA-EDIEIDINPVDLKIDVYRASGAGGQHVNKTESAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ ERSQ KN+++A  +L++++  L+  ++E+ A I    K ++G G 
Sbjct: 240 RITHLPTGIVVECQDERSQIKNRSKAMKVLKSRI--LDGLQQEQNARIAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R  +       +++GD+ + + +  A
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDALMEGDIAEVVDSLRA 341


>gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 360

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 180/352 (51%), Gaps = 8/352 (2%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +  +FD   + V R   LN    DP +  +  +   L +E   L + ++  K+ Q     
Sbjct: 1   MDEIFDKLQSVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVSKQ 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124
                E+  E+ D  +     D +  +  E +  + +     L     D  +  +E+H  
Sbjct: 61  LDDDKEMLREKIDDDLEAMVKDEITSLTDEKDKLEDQMKVMLLPKDPNDDKNIIMEIHGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E   +A  L  MY+++AE++ +K E ++ ++ E  G K   L+I G   Y  LK E
Sbjct: 121 AGGDEGSLFAADLFSMYSKYAERQGWKVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+N
Sbjct: 181 NGAHRVQRVPVTESAGRVHTSTATVGVMPE-EEDVDIDIDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+ +A  +L+A++Y+   Q+ ++  N    S  
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRQKAMKILKARVYDYYAQQEQDQYNAERKSAI 299

Query: 305 EIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G    +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVSDQ 350


>gi|299135937|ref|ZP_07029121.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
 gi|298602061|gb|EFI58215.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
          Length = 356

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 173/346 (50%), Gaps = 9/346 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   L  +  DP L  +  + + + ++ + L+  +   +E +        
Sbjct: 1   MFDRLDQIEERYEDLGRQLGDPTLVSDQKKFQTVAKQHRDLEPTVDKFREYRKLRDGVAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E  D  +     D L  ++ ++    E  +   L     D  +  +E+ AG GG
Sbjct: 61  AKAMLTES-DAEMRAMAEDELLTLEPKLATTEEELKVLLLPKDPNDDKNVIVELRAGTGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   + RMY R+AE+ K+K E L   D +  G+K  T + +G   Y  +K E GV
Sbjct: 120 DEASLFVAEVFRMYLRFAEQHKWKVEVLSQTDSDVGGLKDVTAIFEGDKVYSQMKYESGV 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + +++++   D RIDT+ +SG GGQ VNTT 
Sbjct: 180 HRVQRVPATETQGRVHTSAITVAVLPEA-EEVDVKVEAKDLRIDTFCSSGPGGQSVNTTY 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEI 306
           SA+RITH+PT  VV CQ E+SQ KN+ +A  +LRA+LYE+E ++  +  A   +      
Sbjct: 239 SAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRARLYEVEAERVHQLQAKERKQQVGTG 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   + D R  +     + V++G L   + A +A
Sbjct: 299 DRSEKIRTYNF-PQNRLTDHRIGLTNHQLAMVMEGLLQPTVDALIA 343


>gi|326561123|gb|EGE11488.1| peptide chain release factor 2 [Moraxella catarrhalis 7169]
          Length = 248

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 154/247 (62%), Positives = 194/247 (78%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E   FK E LE+ +G  AGIK
Sbjct: 1   MFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+++KG  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +
Sbjct: 61  SATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E     E SK++IGWG QIRSYVL     +KDLRT +E ++ + VL+GDLD F
Sbjct: 181 LEMQKRMEKQQALEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVETSNTTAVLNGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 276

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 155/265 (58%), Positives = 202/265 (76%), Gaps = 1/265 (0%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           S +L + +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R
Sbjct: 2   SSDLDKYQTHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESR 61

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +KTE +E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S
Sbjct: 62  GWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTS 121

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RS
Sbjct: 122 VFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 181

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT
Sbjct: 182 QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVL-DQSRIKDLRT 240

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
            IE++    VLDGDLD+F++A+L  
Sbjct: 241 GIERSDTQKVLDGDLDEFVEASLKA 265


>gi|89095600|ref|ZP_01168494.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
 gi|89089346|gb|EAR68453.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
          Length = 357

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 177/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E ++   +  D   +
Sbjct: 5   LQAVEDRYERLNELLSDPEIVNDTKKLREYSKEQSGIQETVEAYREYKEVRGQYQDAKAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E    L+     +E   +   +     D  +  +E+   AGG E+ 
Sbjct: 65  LEEKLDAEMREMVKEEIGELEDRVEALEARLKILLIPKDPNDDKNVIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KT+ +E       G K    +I G  A+  LK E G HR+ 
Sbjct: 125 LFAGDLYRMYSRFAEVQGWKTDVIEASSTGVGGYKEIIFIINGNGAFSKLKFENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIEI + D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEA-EEVEIEIHDKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   +  K+ +G G  
Sbjct: 244 LTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQQEAQAEYDQQRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIMEEQ 347


>gi|262038076|ref|ZP_06011481.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
 gi|261747896|gb|EEY35330.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
          Length = 359

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 183/345 (53%), Gaps = 6/345 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V +   L     DP +  +  +     +    +D  +      + R  +   L E 
Sbjct: 5   LDDVVLKHEELTRLLMDPEVISDPKKIMEYNKALNSIDEVVKKYTYYKSRKEEMESLKED 64

Query: 76  ALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +          + I    E  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LKAEKDPEMKEMMLEEIHTIEEEIPGLEEELKILLLPKDPNDDKNVIMEIRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LIKG  AY  LK E GVHR+ 
Sbjct: 125 LFAADVFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS  ++ V P ++D  E+EI++SD +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPATEASGRIHTSTITVAVLPEIEDVNEVEINQSDLKIDTYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E  ++R+E+ +   S         
Sbjct: 245 ITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRKEVESERRSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDGDLD+ + A +A  +
Sbjct: 305 KIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYDQ 348


>gi|253583342|ref|ZP_04860540.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
 gi|251833914|gb|EES62477.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 181/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   LN     P +  +  +     +    +   +   KE +  + D   + E 
Sbjct: 5   LEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSDITPIVEKYKEYKRVIEDFDFIKEN 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L+ ++  +    +  +   L   E D  +  +E+  GAGG E+ 
Sbjct: 65  LKTEKDQEMKEMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++K+K E +E  +    GIK     I G  AY  LK E GVHR+ 
Sbjct: 125 LFAGNLFRMYSRYAERKKWKIEIIEKQEMGIGGIKEVVFSINGFGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN TDSAVR
Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++VQCQ ERSQ KN+ +A   L +KL+E+E    ++ + +    + ++G G  
Sbjct: 245 ITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEME--CEKQRSQVESERRLQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R           LDGDLD+ + A +   +
Sbjct: 303 SEKIRTYNF-PQGRITDHRIKFTVYQLEAFLDGDLDEMIDALITFSQ 348


>gi|229076544|ref|ZP_04209504.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
 gi|229099762|ref|ZP_04230687.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|229105922|ref|ZP_04236546.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|229118825|ref|ZP_04248174.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228664626|gb|EEL20119.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228677496|gb|EEL31749.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|228683651|gb|EEL37604.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|228706577|gb|EEL58790.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 186/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LRDAKAMLEDKLDADMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEITIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|17547620|ref|NP_521022.1| peptide chain release factor 1 [Ralstonia solanacearum GMI1000]
 gi|20139328|sp|Q8XVD0|RF1_RALSO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17429924|emb|CAD16608.1| probable peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum GMI1000]
          Length = 360

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVTTAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  + E     +R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDL + + A  A
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGALAA 346


>gi|167011047|ref|ZP_02275978.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC200]
          Length = 248

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 188/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK
Sbjct: 1   MFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT +E T+   VLDGDLD F
Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRTGVENTNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|262395207|ref|YP_003287061.1| peptide chain release factor 2 [Vibrio sp. Ex25]
 gi|262338801|gb|ACY52596.1| peptide chain release factor 2 [Vibrio sp. Ex25]
          Length = 260

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 155/258 (60%), Positives = 198/258 (76%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E 
Sbjct: 1   MEEKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 176/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   +   +    +      D     E+
Sbjct: 9   LQQLSDRLEEVTALLGSPEATSDMGNYRKLTREHAEITPVVETFHQYMQAQNDMAEAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
             + +      E      + K++    + + LL      D  + ++EV AG GG E+  +
Sbjct: 69  LSDPEMKDFATEEI-EAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+
Sbjct: 128 AGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRIT
Sbjct: 188 PATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    
Sbjct: 248 HLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       V+DGD+++   A +A
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITNALIA 346


>gi|238755548|ref|ZP_04616886.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
 gi|238706228|gb|EEP98607.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
          Length = 360

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE Q    D     E+
Sbjct: 9   LEALQERHEEVEAHLGDATVIADQDRFRALSREYAQLTDVTRCFKEWQSVQEDIETA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  +   E      Q   L     D    +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEELKDARTRSEALEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   DGE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEVMSASDGEHGGYKEIIAKVSGEGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHLPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|295677813|ref|YP_003606337.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
 gi|295437656|gb|ADG16826.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
          Length = 360

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 181/342 (52%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVEHYGLWRQAQNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D S+     + ++  +  +E    + + +L      D  + +LE+ AG GG ES 
Sbjct: 69  LA---DASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDERNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+ +++ E +   + +  G +   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH+PTG+VV+CQ +RSQHKNK +A  +L A++ + +  +++ + A   ++         
Sbjct: 246 VTHLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQTHEQQTKEAATRKNLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+       ++DGDL++ + A ++
Sbjct: 306 RIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLEELIAALVS 346


>gi|161526057|ref|YP_001581069.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189349228|ref|YP_001944856.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|238687082|sp|A9AJ68|RF1_BURM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160343486|gb|ABX16572.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189333250|dbj|BAG42320.1| peptide chain release factor RF-1 [Burkholderia multivorans ATCC
           17616]
          Length = 360

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E   + +     +E   Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINLADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVS 346


>gi|295109135|emb|CBL23088.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           obeum A2-162]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 196/349 (56%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ + R   +  +  +P +  N    + LM+E+  L   +   KE ++    + D
Sbjct: 1   MFDKLEDLLVRFEEVLNELGEPGVTDNQDRFQKLMKEQSELQPIVDTYKEYKENKETIQD 60

Query: 69  NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L +LE   +E+   +L +E SD  +R++   +  +   L     DS +  +E+ AGAGG
Sbjct: 61  SLSMLEEEKDEEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE + +++    G K  T +I+G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMPEA-EEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHRLDAILGGDLDEILDSLIAADQ 347


>gi|16804581|ref|NP_466066.1| peptide chain release factor 1 [Listeria monocytogenes EGD-e]
 gi|224500713|ref|ZP_03669062.1| peptide chain release factor 1 [Listeria monocytogenes Finland
           1988]
 gi|224503217|ref|ZP_03671524.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561]
 gi|255029752|ref|ZP_05301703.1| peptide chain release factor 1 [Listeria monocytogenes LO28]
 gi|20139329|sp|Q8Y4A8|RF1_LISMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16412031|emb|CAD00621.1| prf1 [Listeria monocytogenes EGD-e]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E     E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKTDLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|123442667|ref|YP_001006644.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161451|ref|YP_004298028.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166223618|sp|A1JRU0|RF1_YERE8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122089628|emb|CAL12478.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605428|emb|CBY26926.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665681|gb|ADZ42325.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 360

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D ++  +    + L RE   L +     KE +  + D++   E+
Sbjct: 9   LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRS-VQDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   D L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++  A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|75762680|ref|ZP_00742519.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74489826|gb|EAO53203.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   AV+ R   LN    DP +  +  + +   +E+  +   +   +E +D   +
Sbjct: 1   MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ +   +++E    L+  +  + E  +   +     D  +  +EV   
Sbjct: 61  LKDAKAMLEEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E
Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKRAFAKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRXHTSTATVAVLPEA-EEVEIDIHEKDVRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KFRQEAQAEYDQNRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|46908715|ref|YP_015104.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093870|ref|ZP_00231612.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217963353|ref|YP_002349031.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|226225091|ref|YP_002759198.1| peptide chain release factor 1 [Listeria monocytogenes Clip81459]
 gi|254825334|ref|ZP_05230335.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|254828119|ref|ZP_05232806.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|254831034|ref|ZP_05235689.1| peptide chain release factor 1 [Listeria monocytogenes 10403S]
 gi|254853928|ref|ZP_05243276.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|254900318|ref|ZP_05260242.1| peptide chain release factor 1 [Listeria monocytogenes J0161]
 gi|254913443|ref|ZP_05263455.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|254932215|ref|ZP_05265574.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|254937824|ref|ZP_05269521.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|254993429|ref|ZP_05275619.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-064]
 gi|255026493|ref|ZP_05298479.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-003]
 gi|255519761|ref|ZP_05386998.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-175]
 gi|284802981|ref|YP_003414846.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284996122|ref|YP_003417890.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290892706|ref|ZP_06555698.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|300764957|ref|ZP_07074945.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|61214637|sp|Q71WN5|RF1_LISMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790886|sp|B8DBG6|RF1_LISMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585225|sp|C1KYW0|RF1_LISMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46881987|gb|AAT05281.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017744|gb|EAL08535.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217332623|gb|ACK38417.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|225877553|emb|CAS06267.1| Putative peptide chain release factor 1 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258600504|gb|EEW13829.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|258607316|gb|EEW19924.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|258610428|gb|EEW23036.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|284058543|gb|ADB69484.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284061589|gb|ADB72528.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290557766|gb|EFD91288.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|293583770|gb|EFF95802.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|293591450|gb|EFF99784.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|293594577|gb|EFG02338.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|300514257|gb|EFK41316.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|307572070|emb|CAR85249.1| peptide chain release factor 1 [Listeria monocytogenes L99]
 gi|332312973|gb|EGJ26068.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott
           A]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +    + L +E+  +   +   +E ++   ++ +   L
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++   + +E    LQ+ K ++E   +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
 gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
          Length = 362

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 109/353 (30%), Positives = 174/353 (49%), Gaps = 8/353 (2%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EISEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQ 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHA 123
                 E+  E DD  +   T D L   K   E   K+ E LL      D  +  +E+  
Sbjct: 62  TIKDDEEMLRETDDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AEK+ +K E ++  + E  G K   L+I G N Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMPEA-EDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESS 302
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+  + +++       +++
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQNAYDKKRKNA 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                   +IR+Y   P   V D R  +       ++ G+LD+ ++A +   +
Sbjct: 301 IGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGELDEIIEALIVADQ 352


>gi|312869581|ref|ZP_07729732.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
 gi|311094867|gb|EFQ53160.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
          Length = 362

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 114/355 (32%), Positives = 178/355 (50%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EISEIFDKLQAVTDRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQ 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHA 123
                 E+  E +D  +   T D L   K   E   K+ E LL      D  +  +E+  
Sbjct: 62  TIKDDEEMLRETNDPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AEK+ +K E ++ ++ E  G K   L+I G N Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMPEA-EDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+    +++E +   E  K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY--YQQKEQSAYDEQRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ G+LD+ ++A +   +
Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGELDEIIEALIVADQ 352


>gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
 gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
          Length = 358

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/348 (34%), Positives = 177/348 (50%), Gaps = 17/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     EL
Sbjct: 5   VEELVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATYRSWKQTGDDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               DD     E    L++ + E+ E  +   +    +D  D  LE+ AGAGG ES  +A
Sbjct: 65  GA--DDAEFAAEVK-ELEKARDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGE 184
             LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  +K E
Sbjct: 122 GDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVWARMKYE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VN
Sbjct: 182 GGVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEVDVEINPNDLRIDVYRSSGPGGQSVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303
           TTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+ 
Sbjct: 241 TTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAERNAADARRSQV 300

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 301 RTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLDGDLDAVIQACV 347


>gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
 gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
          Length = 361

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 175/342 (51%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     DP +  N  + + L RE   +D  +   +       +      +
Sbjct: 9   LDKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYLQAADNLDAARAM 68

Query: 76  ALEEDDCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D  + +    E  D   R++   E  Q   L     D  + +LEV AG GG E+ 
Sbjct: 69  -QDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++A++R +K E +   +GE  G K     + G   Y  +K E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ +    +   +I I   D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 188 RVPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGR 310
           ITH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY+ +      E A   +S         
Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      ++++GD+D+ + A LA
Sbjct: 308 RIRTYNY-PQGRVSDHRINLTLYRLGELMEGDMDELLGALLA 348


>gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134]
 gi|119361585|sp|Q46WS9|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia
           eutropha JMP134]
          Length = 360

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 179/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L          +    D      L
Sbjct: 9   LDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQDDLATAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               DD  +    +D +   +  +E  +   + LL      D  +  LE+ AG GG ES 
Sbjct: 69  L---DDPEMKDFAADEIASARERLESLEGSLQKLLLPKDPNDDRNLILEIRAGTGGEESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+++++ E +   + +  G K   + I G  A+  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  ++EI+ SD RIDT+RASGAGGQHVN TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVNKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQH+NK +A  +L A++ + ++  R   A    + +  IG G  
Sbjct: 246 LTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQM--RAAQAKEASTRRNLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++DGDL++ + A  A
Sbjct: 304 SDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLEELVSALAA 346


>gi|315924395|ref|ZP_07920617.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622274|gb|EFV02233.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 364

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 119/348 (34%), Positives = 187/348 (53%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            D   ++   LN +  DP +  +  + + LM+E  H++  I   K  +     + D+  +
Sbjct: 13  LDFLEEKYQKLNQEISDPAVIADQAKWQDLMKEHAHMEPIIQKYKAYREADQAIADSKEM 72

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             LA +  D        D L     ++    E  +   L     D  +  +E+ AGAGG 
Sbjct: 73  --LADKSIDPEFKAMCEDELAEQTAQLATLEEELKILLLPKDPNDERNVIVEIRAGAGGD 130

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE++ +K E L  +  +  GIK     I+G  AY  LK E GVH
Sbjct: 131 EAALFAGDLFRMYSRYAERQSWKIEILSSNILDLGGIKEINFAIQGQGAYSRLKYESGVH 190

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   D +E++++ +D R+D YR+SG GGQ VNTTDS
Sbjct: 191 RVQRVPETESGGRIHTSTATVAVLPEA-DDVEVDLNPNDIRVDVYRSSGNGGQCVNTTDS 249

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           AVR+THIP+G+VV CQ E+SQ KNKA+A  +L+A+LY+LE+QK++  I+   +S      
Sbjct: 250 AVRLTHIPSGLVVTCQDEKSQIKNKAKAMKVLKARLYDLEMQKQQSAISEERKSQVGTGD 309

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R           LDG++D+ + A +   +
Sbjct: 310 RSERIRTYNF-PQGRITDHRIGQTVHQLEAFLDGEIDEMINALITTDQ 356


>gi|300723054|ref|YP_003712352.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
 gi|297629569|emb|CBJ90172.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
          Length = 360

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 182/342 (53%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +  +  K  +  + D+L   E+
Sbjct: 9   LEALQERHEEVLAHLGDAEVIADQERFRALSKEYAQLTDVTNCFKAWKS-VQDDLETAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +     L+  K+      +  Q   L     D  + +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQAELKDAKIRNEELEQQLQVLLLPKDPDDERNCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKVSGEQVYGHLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P V ++   EI+  D +IDTYR+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAILPEVPEAELPEINPGDLKIDTYRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR+E  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMRKRQEAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + R+Y   P   V D R N+      ++++G LD  ++  + 
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLEEIMEGKLDMLIQPIIT 346


>gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299]
 gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299]
          Length = 428

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 136/372 (36%), Positives = 208/372 (55%), Gaps = 19/372 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++     + D +     ++ L+    +  LW + I+AK +M E       ++  +  
Sbjct: 43  LETRVKDALDVVDVERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQLATARGF 102

Query: 63  QDRLCDNLILLELALEE-----------------DDCSILQETSDNLQRIKLEVEYKQFE 105
           ++ L D  + LE+   E                  D +IL E SD    ++ +++  +  
Sbjct: 103 ENLLGDAAVALEMIDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQLDKWEVR 162

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL G+ D+  A + V+AGAGGT++QDWA ML RMY  W   R F    +E  +GEEAG+
Sbjct: 163 RLLGGKYDAMPALVNVYAGAGGTDAQDWAEMLERMYRGWCNSRGFTWRTVERSEGEEAGL 222

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD--SIEIEI 223
           KS T  ++G  AYG+L+ E+G HRLVR SP+  ++ R TSF+++ V PV+D+    E+ +
Sbjct: 223 KSVTFEVQGRFAYGYLRSERGTHRLVRQSPFKKDATRQTSFAAVEVTPVLDEGSVEELTL 282

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            +SD  I T R+ GAGGQ+VN  ++AVRI H+PTG+ V+C++ERSQ  NKA+    L+AK
Sbjct: 283 RDSDLEISTMRSGGAGGQNVNKVETAVRIKHVPTGITVRCEEERSQAANKAKGLARLKAK 342

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  +  ++R               WG+QIR+YV  PY+MVKD+RT  E +    V+ GDL
Sbjct: 343 LVAVAEEQRAADVAAIRGDAVRAEWGQQIRNYVFHPYKMVKDVRTGKETSDVDGVMSGDL 402

Query: 344 DDFMKATLAIKK 355
           D+FM   L  K+
Sbjct: 403 DEFMDEFLRWKR 414


>gi|146283094|ref|YP_001173247.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|145571299|gb|ABP80405.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 270

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 157/268 (58%), Positives = 202/268 (75%), Gaps = 1/268 (0%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           + +    ++R++  +E  +F  + S E D N+ YL++ AG+GGTE+QDWAN+LLRMY RW
Sbjct: 1   MNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTEAQDWANILLRMYLRW 60

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+KR F  E +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 61  ADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHT 120

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ
Sbjct: 121 SFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 180

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL     +K
Sbjct: 181 NERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDDS-RIK 239

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           DLRT +E++    VLDGDLD +++A+L 
Sbjct: 240 DLRTGVERSDCQKVLDGDLDGYLEASLK 267


>gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1]
 gi|254790894|sp|C0QTI3|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1]
          Length = 361

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  ++L  L     DP + ++  + + + +E +  +      KE +  L D      L
Sbjct: 10  LENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEETKSL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     + L+ +    E  +     E L     D  +  LE+  GAGG E+ 
Sbjct: 70  LNN-PDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGEEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E L +H  +  GIK    LIKG  AY  LK E GVHR+ 
Sbjct: 129 LFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + ++IEI   + +I+T RASGAGGQHVNTTDSAVR
Sbjct: 189 RVPETESSGRIHTSTATVAVLPEA-EEVDIEIKPEELKIETMRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           ITHIPTG+VV CQ ERSQ +N+A+A  +LRA+L +  +  +RE+I               
Sbjct: 248 ITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRLEREKIEKERRMQVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N       D+LDGDLD+ +   +A ++
Sbjct: 308 KIRTYNF-PQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIAKEQ 351


>gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4]
 gi|61214640|sp|Q727E1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223554|sp|A1VAK8|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           vulgaris DP4]
 gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
          Length = 357

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +N   +   L  +     ++ +    + L +    L   +      KE++  L DN  L
Sbjct: 5   LENLELKFEDLEQQLSSAEVFNDQDRYRKLTKAHADLKQVVDAFRRYKEMKQNLADNKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L     + D  I     + ++ I+  +    +  +   L     D  +  LE+ AG GG 
Sbjct: 65  LG----DSDHEIRAMAHEEIKAIEAALPDIEQELKILLLPRDPMDDKNILLEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE   +K E L   D +  G K    LI G   Y  LK E G H
Sbjct: 121 EASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALIAGDKVYSRLKYESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   + ++++I   D RID YRASGAGGQHVN T+S
Sbjct: 181 RVQRVPATEAQGRIHTSAATVAVMPEA-EEVDVDIRPDDLRIDVYRASGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIG 307
           AVRITH+PTG+VV CQ E+SQHKNKA+A  +L +++ + E ++    IA+   +      
Sbjct: 240 AVRITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQERAHSVIADARRALVGSGD 299

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R N+   S   V++G+L   + A + 
Sbjct: 300 RSERIRTYNY-PQSRITDHRINLTLYSLDKVMEGELAPLVDALVT 343


>gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
 gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
          Length = 360

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 181/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D ++  +    + L RE   L +     KE +  + D++   E+
Sbjct: 9   LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRS-VQDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE  D  + +   D L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  MLE--DPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
 gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
          Length = 360

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 181/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +  + D++   E+
Sbjct: 9   LEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTHCFKEWRS-MQDDIDAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE  D  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  MLE--DPEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   DGE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+  +A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAVASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103]
 gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103]
 gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
          Length = 360

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D      L
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVTRCFRDWQQNQDDIETAKML 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     + L   + + E  + +           D  D ++EV AG GG E+ 
Sbjct: 69  L---DDPEMRDMAQEELLEAREKSESLEQQLQLLLLPKDPDDERDCFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG  K E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARVMGEGAYGRFKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+ SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR E  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHEAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIEPIV 345


>gi|332971801|gb|EGK10749.1| peptide chain release factor RF1 [Desmospora sp. 8437]
          Length = 358

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  QR   LN    +P +  N    +   +E+  L+       E ++          +
Sbjct: 8   LESIRQRYEELNQLLSNPEVIHNADLLRKYSKEQSDLEPKYHAYCEYKEVADQYEEARIM 67

Query: 76  ALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +L      L+++    K   E  +   L     D  +  +E+   AGG E+ 
Sbjct: 68  LEEESDPEMLDLVKTELEQLSDRKKALEEEIRLLLLPKDPNDDKNVIVEIRGAAGGEEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+ E+  +K+E L+ +     G K     ++G  AY  LK E G HR+ 
Sbjct: 128 LFAADLYRMYTRYGERMGWKSEILDTNTTGLGGFKEVVFSVQGQGAYSRLKYESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +++EI + D RIDT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPTTESGGRIHTSTATVAVLPEA-EEVDVEIQDKDLRIDTFCSSGPGGQSVNTTKSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +LRA+L  L+ +++EE A + ++ K ++G G  
Sbjct: 247 ITHLPTGIVVSCQDEKSQIKNKEKAMRVLRARL--LDQKQQEEEAKMADARKVQVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V+DGDLD+ + A +  ++
Sbjct: 305 SERIRTYNF-PQSRVTDHRIGLTLHKLDLVMDGDLDEIVDALVLEEQ 350


>gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
 gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
          Length = 290

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 137/281 (48%), Positives = 190/281 (67%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D  +LQE    + ++  +++  + + LLSG  DS  A L ++AGAGGT++QDW
Sbjct: 2   ELLELEADEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQDW 61

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML+RMYTRWAE   +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLVRI
Sbjct: 62  AFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRI 121

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++N +R TSF+ + V P +D+S+ +EI E D  + T RA G GGQ+VN  ++AVRI 
Sbjct: 122 SPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEVTTSRAGGKGGQNVNKVETAVRIV 181

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V+C +ERSQ +NK +A   L+AKL  +  ++R +          E  WG QIR
Sbjct: 182 HIPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQIR 241

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +YV  PYQ+VKDLRTN+E T+  DV++GDLD+F++A L  +
Sbjct: 242 NYVFHPYQIVKDLRTNLETTAIIDVMNGDLDNFIQAYLRQE 282


>gi|317491752|ref|ZP_07950187.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920186|gb|EFV41510.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 360

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +  Q    D     E+
Sbjct: 9   LEALQERHEEVQAHLGDAGVIADQDRFRALSREYAQLTDVTRCFQTWQQVQEDLSTA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + +   K ++   + +           D    YLE+ AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEEIAEAKNQIADLEQQLQILLLPKDPDDERSCYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKVIGDGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEPIV 345


>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
           arsenicoxydans]
          Length = 361

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL+ LN          N+   + + RE   L   ++          D      +
Sbjct: 10  LDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKDAQGM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE     +    ++E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 70  LSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +     E  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 130 GDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 190 ATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  RE+ +    + K+ IG G    +
Sbjct: 250 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSQEAATRKSLIGSGDRSER 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDL +   A  A
Sbjct: 308 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAA 347


>gi|289450407|ref|YP_003475653.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184954|gb|ADC91379.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 366

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L+    DP L  +      +++E+  L   +  I++   +  +    L +
Sbjct: 6   LEAVLNRYEELSAGLSDPSLLADRDRYLRVVKEQAGLTEIVGVIRDYIAKKDELAENLAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD  +     + ++ +K+++    E  Q   L     D  + YLE+  GAGG E+ 
Sbjct: 66  LQETDDEEMRLLLKEEIRDLKVKLPELEEKLQILLLPKDPRDEKNVYLEIRGGAGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A +L RMY  +AE + FK E +E +  E  G+K     I+G  AY   K E GVHR+ 
Sbjct: 126 LFAEVLFRMYQSYAESKHFKVEIVEWNATELGGLKEVVCSIQGSGAYSLFKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D +++EI   D  IDTYR+SGAGGQHVN TDSA+R
Sbjct: 186 RVPVTESGGRIHTSTVTVAVLPEV-DEVDVEILPGDITIDTYRSSGAGGQHVNKTDSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ +RSQ+KNK +A  +LRAKLY  E  + E   +I E+ + ++G G  
Sbjct: 245 ITHIPTGIVVTCQDQRSQYKNKDRAMAVLRAKLY--ERAQEERAGSIAEARRDQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +      ++L G+LD  ++  +  ++
Sbjct: 303 SERIRTYNY-PQGRVTDHRIGLTVYKIDEILAGNLDLIIEPLMRAER 348


>gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
 gi|153796765|gb|EDN79185.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
          Length = 356

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 190/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E +     + D
Sbjct: 1   MFDKLEDLLIRYEEVMGELQEPGVANDPERFRKLMKEQSDLAPIVEAYNEYKQCKQNIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L++LE   +E+   + +E  +  +    E+E   +   L     D  +  +E+ AGAGG
Sbjct: 61  SLMMLEEESDEEMRELAKEELNESKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R+++TE + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEVYRMYLHYAESRRWRTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EDVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++        S+   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEVIDSLIAADQ 347


>gi|253574239|ref|ZP_04851581.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846716|gb|EES74722.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 355

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +    +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKRLRDYSKEQSDLQPAYEAYTEYKNVIGELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++ +    +  +       L     D  +  +E+   AGG
Sbjct: 61  AKAMQAEKLDDEMREMVKMEIEELTARQQALEEKIRILLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+A+ + ++ E +++++ +  G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAADLYRMYTRYADSQGWRVEVMDMNESDLGGFKEVIFMINGKGAYSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P V + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPATESGGRIHTSTSTVAVLPEV-EEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA++Y+++   +EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIYDMKR--QEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G+L++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDQVMNGELEEIVSALTIAEQ 347


>gi|158520489|ref|YP_001528359.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
 gi|238686878|sp|A8ZTL8|RF1_DESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158509315|gb|ABW66282.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
          Length = 356

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 177/346 (51%), Gaps = 13/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L     DP +  +    +   RE   L + +   +  +    +   
Sbjct: 1   MFDRLQDVERRFGELEGLMADPSIVNDREAYQKHSREHAELADIVDAYRRYKAVSDEIEK 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGG 127
             +L LE+ D  I +   + + R+K E E    + ++LL      D+ +  +E+ AG GG
Sbjct: 61  SRDL-LEDRDPEIRELAKEEISRLKDERERLDGELQNLLTPKDPNDNKNVLVEIRAGTGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY R+AE   +KTE +        G K    ++ G  AY  LK E G+
Sbjct: 120 EEASLFAHDLFRMYWRYAETMGWKTEIMSSSVTGSGGFKEVIFMVYGKGAYSHLKFESGI 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V     + +E+ I  S+ + D +R+SG GGQ VNTTD
Sbjct: 180 HRVQRVPETEAQGRIHTSAVTVAVLAEA-EEVELHIDPSEIKTDVFRSSGPGGQSVNTTD 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA+L  L+   +++   I ++ K ++G
Sbjct: 239 SAVRLTHLPTGVVVICQDEKSQLKNKNKAMKVLRARL--LDRMIQDQNEKIAQNRKDQVG 296

Query: 308 WGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R  I       VL GDL + +   
Sbjct: 297 SGDRSGRIRTYNF-PQGRVTDHRAGITLYKLESVLQGDLSELVNGL 341


>gi|237737785|ref|ZP_04568266.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
 gi|229419665|gb|EEO34712.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
          Length = 358

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 181/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   LN     P +  +  +     +    +   +   KE +    D   + E 
Sbjct: 5   LEEVVRRFDELNEMLGSPEILSDPKKMMECNKALADITPLVEKYKEYKTLSEDLQFIKEN 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +  ++  + ++ ++   + E     L   E D  +  +E+  GAGG E+ 
Sbjct: 65  IRNEKDHDMREMMNEEQKELEEKLPEYEKELKILLLPKDENDDKNVIVEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+RK+K E +E  +    GIK A   I G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYNRYAERRKWKVEIIEKQEIGIGGIKEAVFSINGLGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN TDSAVR
Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPKDLKIDTYRSGGAGGQHVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQ KN+ +A   L +KLYE+E    ++ + +    K ++G G  
Sbjct: 245 ITHLPTGIVVQCQDERSQLKNREKAMKHLVSKLYEME--CEKQRSQVESERKLQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R           LDGD+D+ + A +   +
Sbjct: 303 SEKIRTYNF-PQGRITDHRIKFTVYQLDAFLDGDIDEMIDALITFNQ 348


>gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1]
 gi|172048528|sp|A5WFG1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp.
           PRwf-1]
          Length = 364

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 178/348 (51%), Gaps = 8/348 (2%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + L    D    V R   +     DP    +  + + L  E   L    +  +  +    
Sbjct: 3   DSLRERLD--QMVDRFEEVTALLSDPDTISDNNKFRELSMEHSELSEITALWQRYRQAEI 60

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHA 123
           D     E+  +  D  + +   + +     ++E  + E     L     D   A+LE+ A
Sbjct: 61  DKKDAQEMINDASDPDMKEMMQEEIDSASRDIEAMEEELNVMMLPKDPNDKVPAFLEIRA 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  ++  L RMY R+A  + +  E L  ++GE  G K     + G + YG LK 
Sbjct: 121 GTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIISRVSGNDVYGRLKF 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS  ++ V P V+    +E++ +D R+DT+R+SGAGGQHV
Sbjct: 181 ESGAHRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVELNPADIRMDTFRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIPTGVV +CQQERSQHKN+A+A  ML A++ + ++Q++ + A+    + 
Sbjct: 241 NTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRNL 300

Query: 304 TEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              G    +IR+Y   P   + D R N+       +++GDL + + A 
Sbjct: 301 VGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDAL 347


>gi|297588765|ref|ZP_06947408.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
 gi|297574138|gb|EFH92859.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
          Length = 355

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 192/347 (55%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +     E+
Sbjct: 5   LDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D +  ++ ++E      +   L     D  + ++E+ AGAGG E+ 
Sbjct: 65  LGTTGDSEMEELLKDEISTLEEQIEKDQEDLKILLLPKDPNDEKNVFIEIRAGAGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +++K+++ TE ++I      GIK   +++KG  AY  LK E GVHR+ 
Sbjct: 125 LFAGELLRMYQMYSDKKRWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + ++++I + D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPQTESSGRIHTSTATVAVLPEA-EDVDVKIEQKDLRIDVFRASGNGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNK +A  +L+++LY+L   + E+  +  ++ K+++G G  
Sbjct: 244 ITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDL--MEEEKNKDRADARKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N       + LDGD+++ +    +  +
Sbjct: 302 SERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347


>gi|260062127|ref|YP_003195207.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
 gi|88783689|gb|EAR14860.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
          Length = 358

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 182/348 (52%), Gaps = 8/348 (2%)

Query: 13  LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68
           + D  N   QR   ++     P +  +      L +E + L   +       ++Q+R+ +
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKEIVDMREKYIQLQNRISE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +L    + +   + +   +  +     +E   + + +     D+ D  +E+ AG GG
Sbjct: 61  AEEILSDGSDPEMAEMAKLQLEEAREAIPPLEDAIKMKLIPKDPEDAKDVVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E R +KT  +++ +G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGFKEIHFEVSGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  +++I   D RID + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEA-EDFDVQIDPKDVRIDYFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEI 306
           SAVR+TH+PTG+V QCQ E+SQHKNK +A+ +LR++LY++EL +K+EE A    S  +  
Sbjct: 240 SAVRLTHVPTGIVAQCQDEKSQHKNKDKAFKVLRSRLYDMELAKKQEEDAAKRNSQVSSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D R  +      ++++GD+   +   + ++
Sbjct: 300 DRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKIIDELMLVE 346


>gi|297520245|ref|ZP_06938631.1| peptide chain release factor 2 [Escherichia coli OP50]
          Length = 248

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 156/247 (63%), Positives = 187/247 (75%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIK
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F
Sbjct: 181 LEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|313903650|ref|ZP_07837040.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466203|gb|EFR61727.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 389

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 176/342 (51%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  +  DP +  +    + L +ER  L+  +   +  ++   D      L
Sbjct: 38  LAARLGRFDQLERELADPAVAADPRRWQPLAQERAELEPLVEAYRRWREAAADLEAARAL 97

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             E ++       +  ++R++ E +  +       L     D  D  +E+ AG GG E+ 
Sbjct: 98  LREAEEADERAYLAAEVERLEGERQALERALRGLLLPRDPRDQRDVIMEIRAGTGGEEAA 157

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ ++TE +   + +  G K     + G  A+  LK E GVHR+ 
Sbjct: 158 LFAGDLFRMYQRYAERQGWRTEIMAATESDLGGFKEIIFAVSGRGAFSRLKHESGVHRVQ 217

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +E++I   D  IDT+ ASG GGQHVN T+SAVR
Sbjct: 218 RVPVTEAGGRIHTSTATVAVLPEA-EEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVR 276

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITH PTG+VV CQ ERSQHKN+A+A  +LRA+L +    +++EE++    S         
Sbjct: 277 ITHKPTGIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEELSQQRRSQVGTGERSE 336

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y  +    V D R  +      +V+DGDLD+ + A  A
Sbjct: 337 KIRTYNFRE-NRVTDHRIGLTLYRLQEVMDGDLDELLDALAA 377


>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
          Length = 356

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL+ LN          N+   + + RE   L   ++          D      +
Sbjct: 5   LDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKDAQGM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE     +    ++E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +     E  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 185 ATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  RE+ +    + K+ IG G    +
Sbjct: 245 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSQEAATRKSLIGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDL +   A  A
Sbjct: 303 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAA 342


>gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
 gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
          Length = 354

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 185/342 (54%), Gaps = 6/342 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + RL  L      P +  +    ++L +E  HL       +++     +     E+
Sbjct: 5   VEEMLNRLPELEELLGQPDVVNDQKRYRLLTQEHAHLSQLKQVYEDLISSRKELSDNEEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESL--LSGEADSNDAYLEVHAGAGGTESQ 131
              E+D   ++   ++++R+  +    Q   E+L       D+ +  LE+ AG GG E+ 
Sbjct: 65  FASEEDAEFIKVLEEDIERLTKKTGELQKKLETLIVPPDPKDNKNTILELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +    +RMY  +A++R +K E L     +  G K   + + GPN Y +LK E G HR+ 
Sbjct: 125 LFVGDCVRMYKMFADERGWKYEELASSPSDAGGFKEYMMALSGPNVYRYLKYEGGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V    D+  E++I E D R+DTYRASGAGGQHVNTTDSAVR
Sbjct: 185 RVPETETQGRVHTSAITVAVLLEPDEDSEVQIDEKDLRVDTYRASGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+V  C +ERSQHKN+ +A  +L+AK+ E+E QK+ EE A+   S         
Sbjct: 245 LTHIPTGIVAYCSEERSQHKNRDKAMRLLKAKIMEIEAQKKFEERASERASQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+ K +   V++GDL++ + A +A
Sbjct: 305 RIRTYNF-PQNRITDHRINLTKYNLDKVMEGDLEEIVNAIVA 345


>gi|238919470|ref|YP_002932985.1| peptide chain release factor 1 [Edwardsiella ictaluri 93-146]
 gi|259585221|sp|C5B814|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
           93-146]
          Length = 360

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 181/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +        +  + D+L   E+
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLAWRQ-VQDDLTTAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+  +  +    +  Q   L     D  D +LEV AG GG E+ 
Sbjct: 68  LL--DDPEMRDMAQEELKEARGRLAELEQQLQILLLPKDPDDERDCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARVSGDGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++R+Y   P   V D R N+      +V++G LD+ ++  +
Sbjct: 306 RVRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIEPIV 345


>gi|282878031|ref|ZP_06286839.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
 gi|281299866|gb|EFA92227.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
          Length = 374

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 126/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W++   A+  M + + ++  +   ++++ 
Sbjct: 12  ERAEALHRYLNIDQKKVEFEEEQLRTQAPDFWEDPKRAQEQMIKVKGIEKWLVGYQQVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +   +E       E   +  +    +E+ + +++L    D  D  +++++G
Sbjct: 72  LADELELAFDFYRDE--MITEDELDADYAKAVAAIEHLEMKNMLRQTEDPMDCVMKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA ML+RMY RWAE   +K    +I DG+EAGIKS T+ I+ G  AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHDYKCTISDIQDGDEAGIKSVTMKIEGGEYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARVSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYQYEDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + T    V+DG LD+F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDAVMDGKLDEFIKAYLM 365


>gi|295400673|ref|ZP_06810650.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977254|gb|EFG52855.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 358

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +   +R   LN    DP +  +  + +   +E+  L+  +   +E +    +L D   +
Sbjct: 5   LEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVCKQLDDAKAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E  D L++ + E+  K    L      D  +  +E+ A AGG E+ 
Sbjct: 65  LEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G HR+ 
Sbjct: 125 LFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++   P + + IE+EI+E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVACLPEM-EEIEVEINEKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G G  
Sbjct: 244 LTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYD--KYQQEARAEYDQTRKQAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQ 347


>gi|256545370|ref|ZP_05472733.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
 gi|256398931|gb|EEU12545.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
          Length = 357

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 189/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  K  DP +  +    K + RE   L   +    +I+          EL
Sbjct: 5   LEHMRENFKELEKKLADPEVLSDTERFKKVSREYNQLKPIVEKYNQIRSAEDMINENTEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD  ++      +   K  +E      +   + +   D  D  +E+ AGAGG E+ 
Sbjct: 65  LKEADDKEMIDLLKSEIDENKKNLEKYNEDLKVLLIPTDPNDHKDVIVEIRAGAGGEEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K+K+KTE +++      G+K AT +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGNLYRMYHMYADKQKYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D ++I+I  +D R D YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEA-DEVDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQ KNK +A  +LRA+LYE+E QKR+    I ++ K+++G G  
Sbjct: 244 LTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEIEEQKRQ--KEISDNRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N       D LDG++++ +++ +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIESLITEDQ 347


>gi|261749632|ref|YP_003257318.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497725|gb|ACX84175.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 367

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 146/349 (41%), Positives = 229/349 (65%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++N L  + + D   + +     K  + + W+N  +AK   +    +   I    E+
Sbjct: 10  ISEKINKLQEVLNIDQIKESIEKEEKKISNQNFWKNCKKAKNFTKRLHAMKTCIKNFFEL 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +  IL  L+ EED   + +E    L + K  +   +F++LLS E D  +A L++ 
Sbjct: 70  KNALEELEILFSLSKEED---LEKEVKIQLNKTKNLLSNIEFKNLLSEEEDIFNAVLQIS 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DW +ML+RMY  WAEK KF  + +    G+  GIKS TL + G  A+G+LK
Sbjct: 127 SGAGGTESCDWTSMLMRMYIMWAEKNKFSVKNIHHIPGDITGIKSVTLELDGLYAFGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRL+R+SP+D+NS+RHTSFSS++VYP+VD  I+I I+ SD + +T+R+SG+GGQ+
Sbjct: 187 GENGVHRLIRLSPFDNNSKRHTSFSSVYVYPLVDKDIDININMSDIQWNTFRSSGSGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  +S VR+ H PTG++++  + RSQ +N+ +A ++L+++L+E+E+ K+ E  N  ESS
Sbjct: 247 VNKVESGVRLRHHPTGIIIENTETRSQMQNRQKALHLLKSRLFEIEISKKNEKKNKIESS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIR+Y++ PY++VKDLRT  E T    V++G++D F+K  L
Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYETTQIHSVMNGEIDIFLKKFL 355


>gi|149371331|ref|ZP_01890817.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
 gi|149355469|gb|EDM44028.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
          Length = 317

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 138/308 (44%), Positives = 205/308 (66%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +     ++  +E      D  ++ E   E +  +  +   +  ++    +E  +F 
Sbjct: 1   MKVLRSKKKWVTDYEEATTLFEDAEVIYEFFKEGEAPA--ENVEERYKKAFEAIEALEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D+  A L++ AGAGGTES DWANML+RMY  WAE+  FK + L    G+ AGI
Sbjct: 59  NMLSEEGDAMSAVLQITAGAGGTESCDWANMLMRMYLMWAERNGFKVKELNYQAGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEI+I+ 
Sbjct: 119 KTVTLEIDGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   D  R+ GAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++LY
Sbjct: 179 ADIGWDFARSGGAGGQNVNKVETKAILTHKPSGIVIHNSETRSQLENRQKAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++      E +K  I WG QIR+YVLQPY++VKD+R N E T+P  +LDG +D+
Sbjct: 239 EIELRKQQAQRAEIEGNKMAIEWGSQIRNYVLQPYKLVKDVRNNHESTNPDAILDGHIDE 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLMM 306


>gi|305667119|ref|YP_003863406.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
 gi|88708053|gb|EAR00291.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
          Length = 313

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 143/308 (46%), Positives = 209/308 (67%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  Q   + +      Q  + D  +L+E   E +      E +    +    +E  +F+
Sbjct: 1   MKFIQSKKHWVDDFNAAQTLVGDLEVLMEFLKEGEVSE--NEVNSQYSKATGLIEKLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA ML+RMY  W++K  FK + L   +G+ AGI
Sbjct: 59  NMLSEEGDELTAVLQITAGAGGTESCDWAAMLMRMYMMWSQKNGFKVKELNYQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL ++G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI+++ 
Sbjct: 119 KTVTLEVEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIDVNP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++ H P+G+ +QC   RSQH N+A A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLVHKPSGIQIQCSDSRSQHDNRATAMKMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K+ E     ESSK +I WG QIR+YV+ PY++VKD+RT+ E  +   V+DG++D 
Sbjct: 239 EIELRKKMEAREEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTSEETGNVDAVMDGNIDQ 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAFLMM 306


>gi|15616337|ref|NP_244642.1| peptide chain release factor 1 [Bacillus halodurans C-125]
 gi|20139353|sp|Q9K6F4|RF1_BACHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|10176399|dbj|BAB07494.1| peptide chain release factor 1 in translation [Bacillus halodurans
           C-125]
          Length = 356

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
             +  +R   LN    DP +  +  + +   +E+  ++  +   +E +   D+  D   +
Sbjct: 5   LQSLDERYERLNELLSDPEVISDSNKLREYSKEQADMEETVQVYREYKTVMDQYQDAKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+++  ++++E  D L   K ++E   +   L     D  +  +EV   AGG E+Q
Sbjct: 65  LEDKLDDEMYAMVKEEIDELATRKEDLEAKLKVLLLPKDPNDDKNVIVEVRGAAGGDEAQ 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE + +K E +E    E  G K     + G  AY  LK E G HR+ 
Sbjct: 125 LFAADLYKMYARYAEAQGWKIEVIEASSTELGGYKEIIFSVNGKGAYSKLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E++I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTESGGRIHTSTATVAVLPEA-EEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G G  
Sbjct: 244 LTHLPTGIVVSCQDEKSQIKNKEKAMKVLRARIYD--KFQQEAQAEYDQTRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ +++ +  ++
Sbjct: 302 SERIRTYNF-PQSRVTDHRIGLTLQKLEQILQGKLDEIIESLIVHEQ 347


>gi|313203258|ref|YP_004041915.1| bacterial peptide chain release factor 1 (brf-1) [Paludibacter
           propionicigenes WB4]
 gi|312442574|gb|ADQ78930.1| bacterial peptide chain release factor 1 (bRF-1) [Paludibacter
           propionicigenes WB4]
          Length = 361

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   ++T   DP +  +      L +E   L+  ++   E +  L       EL
Sbjct: 10  LEGLQHKFEEISTLITDPSVITDQKRFVKLNKEYHDLEMILNAKNEYEMALAHLAEAKEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     +  I+  +   +       + +   D+ +A +E+  G GG E+ 
Sbjct: 70  LDTESDPEMREMAKAEVDSIEPIIPEMEENIKLLLIPADPEDNKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MYT++ E + ++ E   I +G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLFKMYTKYCETKGWRLEITNISEGTAGGYKEIIFTVTGENVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P + +  + E+ ESD R+DT+ +SGAGGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAATVAVLPEM-EEFDYELKESDVRVDTFCSSGAGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           + HIPTG  VQCQ E+SQHKNKA+A N LR++LY +E QK  +EI +  ++  +      
Sbjct: 249 LVHIPTGTTVQCQDEKSQHKNKAKAMNELRSRLYAIEHQKYLDEIGSKRKTMVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N    + S  + GD+   +   +  +
Sbjct: 309 KIRTYNY-PQGRITDHRINFTIYNLSAFMGGDIQGVIDQLIVAE 351


>gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893]
 gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893]
          Length = 361

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 119/337 (35%), Positives = 181/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++    D     N  + + L RE   ++  +   +  Q    D     EL
Sbjct: 9   LEQLVDRFEEVSALLSDQGTIANQDKFRDLSREFAEIEPIVHCFQAWQKSRDDVKEATEL 68

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  +     + L    Q+ +   E  Q   L     D  + +LEV AG GG E+ 
Sbjct: 69  ARD-GDADMRAMAEEELGLAEQKGEELDEELQRLMLPKDPNDGKNVFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE+++++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARIAGSAVYGALKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D++  +EI++SD R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ+ERSQHKN+A+A + L ++L   E++++++ +A   +S         
Sbjct: 248 ITHIPTGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQQKTMAATRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +IR+Y   P   V D R N+      +V+ GDLD  +
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLDEVISGDLDAVI 343


>gi|313896150|ref|ZP_07829704.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312975575|gb|EFR41036.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 354

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               +   L     DP +  ++   +   RE   L   ++  +  +          E+  
Sbjct: 7   AVADKYRELEALLSDPAVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAEDKEMLA 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E  D  + +   + +   + E E          L     D  +  +E+  G GG E+  +
Sbjct: 67  EA-DAEMKELLLEEIAAAEAERERLAEELPILLLPRDPNDDKNVIVEIRGGVGGEEAALF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ ++TE L  ++ E  G K  + L+ G  AY  LK E G HR+ RI
Sbjct: 126 AASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTHRVQRI 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RIT
Sbjct: 186 PVTESGGRIHTSAVTVAVLPEA-EDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRIT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VVQCQ E+SQ KNK +A  +LRA++Y+    ++E+   +    ++++G G    
Sbjct: 245 HLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYD--RAQQEQADAVAADRRSQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDG+L++ + A +   +
Sbjct: 303 RIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQ 346


>gi|300702903|ref|YP_003744504.1| peptide chain release factor rf-1 [Ralstonia solanacearum CFBP2957]
 gi|299070565|emb|CBJ41860.1| peptide chain release factor RF-1 [Ralstonia solanacearum CFBP2957]
          Length = 356

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYATWKQAEDDVATAQEL 64

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  + E     +R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDELRAARERMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGDLD+ +    A
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAA 342


>gi|290475215|ref|YP_003468101.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
 gi|289174534|emb|CBJ81328.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
          Length = 360

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +     K  +    D     E+
Sbjct: 9   LEALQERHEEILVHLGDASVIADQDRFRALSKEYAQLTDVTHCFKSWKTVQEDLQTA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K+      +  Q   L     D  + +LEV AG GG E+ 
Sbjct: 68  ML--DDLEMREMAQEELKDAKIRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIAKVSGDQVYGHLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +IS  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEIPEAELPDISPGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR+E  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEMHKRQEAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLIQPII 345


>gi|332526537|ref|ZP_08402649.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
 gi|332110805|gb|EGJ10982.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
          Length = 351

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 109/331 (32%), Positives = 178/331 (53%), Gaps = 6/331 (1%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ L+    DP +  +V   + L RE+  + + +   +    R  D     E+ + E D
Sbjct: 2   RLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQDLAAAREMLVAESD 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANML 137
             +       +   + ++   + E  L        D+ +A++E+ AG GG ES  +A  L
Sbjct: 62  AEMAAMAEQEVVDAEADLARLEHELQLALIPRDPDDARNAFVEIRAGTGGDESALFAGDL 121

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+ E++ ++ E +   + E  G K   L + G + +G L+ E G HR+ R+   +
Sbjct: 122 ARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGTDVFGTLRFESGGHRVQRVPATE 181

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS  ++ V P  D++ E++++ ++ RIDT+RASGAGGQHVN TDSA+RITH+PT
Sbjct: 182 AQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHVNKTDSAIRITHLPT 241

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYV 316
           G+V +CQ +RSQH+NKA+A  +L A+L E +  +R         S    G    +IR+Y 
Sbjct: 242 GIVAECQDDRSQHRNKAKAMAVLAARLREKDRAERAAKEAATRKSLVGSGDRSDRIRTYN 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             P   + D R N+       ++DG+LDD +
Sbjct: 302 F-PQGRLTDHRINLTLYKLGQIMDGELDDVV 331


>gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383]
 gi|119361516|sp|Q39K18|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp.
           383]
          Length = 360

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 182/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D S+     D ++  +  +   + E     L     D  + +LE+ AG GG ES 
Sbjct: 69  L---GDLSMRDFAEDEIRSARESMSRLETELQKMLLPKDPNDERNIFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G  
Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++DGDLD+ + A ++
Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELISALVS 346


>gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
 gi|226739102|sp|B5YDB2|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
          Length = 367

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   +        +  ++   + L++ER  ++  +    E +  L +   
Sbjct: 6   VLDKLEEIEKRFKEIENLLTKEEIISDLSRYQSLLKERAKIEEIVEKFSEYKKLLKERED 65

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
           L  +  EE D  +       L+ I+ ++E  +F+     L     D  +  +E+ AG GG
Sbjct: 66  LEVMTKEEQDEDLRSLAEAELEEIEKKLEKIEFDLKALLLPKDPNDEKNIIMEIRAGTGG 125

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +A+K+ +K E +  +     G K    +++G  AY  LK E GV
Sbjct: 126 EEAALFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIVEGKGAYSRLKFESGV 185

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P + + +++EI   D RI+T+R+ GAGGQHVN T+
Sbjct: 186 HRVQRVPITESSGRIHTSTATVAVLPEM-EEVDVEIDPKDLRIETFRSGGAGGQHVNKTE 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           S VRITHIP+G+VVQCQ ERSQH+N+ +A  +LRA+LYE    +RE+   I    + ++G
Sbjct: 245 SGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEY--YQREKENEIASQRRQQVG 302

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P + V D R N       +VL G+LD+F+   +  +K
Sbjct: 303 TGERSEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEK 352


>gi|205375314|ref|ZP_03228104.1| peptide chain release factor 1 [Bacillus coahuilensis m4-4]
          Length = 356

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   AV+ R   LN    DP +  +  + +   +E+      +   +E +D       
Sbjct: 1   MFDRLQAVEDRYDKLNELLSDPEVVSDPKKLREYSKEQSGHQATVEAYREYKDAKEQYND 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
             ++  ++ D  + +   + +  ++ ++E  +   + LL      D  +  +EV   AGG
Sbjct: 61  AKQMLEDKLDPEMREMVKEEISELEEQIESLEERMKILLIPKDPNDDKNVIMEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  A+  +K E G 
Sbjct: 121 EEAALFAGTLYRMYSRFAEMQGWKTEVIESSPTGLGGYKEIIFMINGNGAFSKMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +EIEI + D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEA-EEVEIEIHDKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A      K+ +G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYD--KFQQEAQAEYDAQRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       +L+G +D+ + A +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVIDALI 343


>gi|320529373|ref|ZP_08030461.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
 gi|320138339|gb|EFW30233.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
          Length = 354

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               +   L     DP +  ++   +   RE   L   ++  +  +          E+  
Sbjct: 7   AVADKYRELEALLSDPTVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAEDKEMLA 66

Query: 78  EEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E  D  +    L+E +      +   +      L     D  +  +E+  G GG E+  +
Sbjct: 67  EA-DAEMKELLLEEIAAAEAERERLAKELPILLLPRDPNDDKNVIVEIRGGVGGEEAALF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ ++TE L  ++ E  G K  + L+ G  AY  LK E G HR+ RI
Sbjct: 126 AASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTHRVQRI 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RIT
Sbjct: 186 PVTESGGRIHTSAVTVAVLPEA-EDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRIT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VVQCQ E+SQ KNK +A  +LRA++Y+    ++E+   +    ++++G G    
Sbjct: 245 HLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYD--RAQQEQADAVAADRRSQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDG+L++ + A +   +
Sbjct: 303 RIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQ 346


>gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
 gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
          Length = 355

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 180/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R + +  +  +P   +++   K L +E   L + +      ++ L       +L
Sbjct: 5   LESIASRFTEIEERLGEPDTMKDMHLYKELSQEHAALKDTVEEFGHYKELLSGIEETKQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     L+ +K  +E  +   ++LL      D  +  +E+ AG GG E+ 
Sbjct: 65  LESESDHEMREMAEVELEELKDHLEKSEKRLKTLLVPKDPLDGKNTIIEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R++E++ +K E +E  D E  G K     I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLYRMYSRFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   +  +I+IS  D +ID +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPSTESQGRIHTSAVTVAVLPEA-EKTDIDISPEDLKIDVFRSSGPGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTGVVV CQ E+SQ KNKA+A  +LRA+LYE E  K+ +  +    S+   G    
Sbjct: 244 VTHIPTGVVVTCQDEKSQLKNKAKALRVLRARLYEAEEMKQRKERDQARKSQIGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+       V++G L++ + A 
Sbjct: 304 RIRTYNF-PQNRVTDHRINLTLYKLDQVMEGALNELIDAL 342


>gi|83747499|ref|ZP_00944537.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
 gi|83725813|gb|EAP72953.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
          Length = 374

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 23  LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDVATAQEL 82

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  + E      R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 83  LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 143 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 203 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 263 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 320

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGDLD+ +    A
Sbjct: 321 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAA 360


>gi|327441448|dbj|BAK17813.1| protein chain release factor A [Solibacillus silvestris StLB046]
          Length = 358

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD   AV+ R   LN    DP +  +  + +   +E+  +   +      K ++++L D
Sbjct: 1   MFDRLQAVEDRYERLNELLSDPDIVSDSNKLREYSKEQSDIQEMVDVYRVYKSVKEQLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGG 127
              L+E+  + +   +++E  ++L +   E+E   +   +     DS +  +E+   AGG
Sbjct: 61  TRELMEIEKDAEMLEMMKEEFNDLNKQVPELEERLRILLIPKDPNDSKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +K + +E       G K   L+I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYTRYAETQGWKVDVMEATPNPAGGYKEVILMINGQGAYSKFKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V    ++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVH-VEDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +L A++ +    ++E  A I  + KT +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILVARVAD--KHRQEAQAEIDATRKTAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALILDEQ 347


>gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
 gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
          Length = 360

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K + E  +       L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ +R++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIV 345


>gi|227529623|ref|ZP_03959672.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
 gi|227350413|gb|EEJ40704.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
          Length = 362

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 111/353 (31%), Positives = 171/353 (48%), Gaps = 8/353 (2%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EMAEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKKVTQ 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHA 123
                 EL  E DD  + + T D L   K +     K+ E LL      D  +  +E+  
Sbjct: 62  TISDDEELLRESDDPDLTELTKDELSSAKDQQAKLEKELEILLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AE + +K E ++  + E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLHYAENQGWKVEVVDKSETEVGGFKEIALMITGDKVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMPEA-EDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   QK +   +      
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQSAYDAKRKDA 300

Query: 304 TEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 301 IGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGDLDEIIEALIVADQ 352


>gi|15677534|ref|NP_274690.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|20139351|sp|Q9JY93|RF1_NEIMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7226940|gb|AAF42034.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|325134780|gb|EGC57417.1| peptide chain release factor 1 [Neisseria meningitidis M13399]
 gi|325199720|gb|ADY95175.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325205597|gb|ADZ01050.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196]
          Length = 358

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|328773067|gb|EGF83104.1| hypothetical protein BATDEDRAFT_85755 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 367

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 145/355 (40%), Positives = 220/355 (61%), Gaps = 5/355 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIK 60
            +S+    +    +W+    + S L  + +D +LW  +  EA  + ++   L++ I+   
Sbjct: 7   NISKLFKTIDEKKNWEVVESKASDLRDRLKDDNLWTTDTKEAIEIQKDISRLESEIAEHS 66

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +   +  +   ++ELA EE D ++L+E   +++ ++ ++     +SL++ E D +  Y+E
Sbjct: 67  KFTVKWNETQSMIELAKEEGDDTLLKEVVADMEDLEAQLRQYFIKSLMTDEVDQSGCYIE 126

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGG ES DW +ML RMY RW   +     ++    G+ AG+KS+T  I+G  AYGW
Sbjct: 127 IRAGAGGAESCDWVSMLTRMYERWGADQGHTVTSIAQVKGDVAGLKSSTTQIQGDYAYGW 186

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD----DSIEIEISESDCRIDTYRAS 236
            K E GVHR VR+SP+DSN++RHTSF S+ V P++      +  IEIS ++ +++  RA 
Sbjct: 187 SKNESGVHRFVRVSPFDSNAKRHTSFVSVQVLPILSTSRLSTKTIEISTNELKLEFMRAQ 246

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T+SAVR+THIPTG+ V CQ ERSQ +NKA A  ML++KLY++EL K     
Sbjct: 247 GAGGQHVNKTESAVRMTHIPTGITVFCQSERSQVQNKATALEMLKSKLYQVELDKLSRQK 306

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               ++  E  WG  IRSYVLQPYQ+VKD RT  + T+  DVL+G L +FM++ L
Sbjct: 307 QEHHANLGENAWGNHIRSYVLQPYQLVKDTRTGTQTTNVQDVLNGGLQEFMESAL 361


>gi|222624780|gb|EEE58912.1| hypothetical protein OsJ_10554 [Oryza sativa Japonica Group]
          Length = 356

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 144/345 (41%), Positives = 201/345 (58%), Gaps = 35/345 (10%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  +     W   ++R   L+   E P LW + + A  + RE   L   I  + + +
Sbjct: 34  AQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFE 93

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +++ +L LA EEDD  +                                    V A
Sbjct: 94  QELMEHIDMLRLAREEDDNELE----------------------------------TVQA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K 
Sbjct: 120 GAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKA 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQH 242
           E GVHRLVRISP+DS  RRHTSF+++ V P++ D S   +I +SD RI+ +R+ G GGQH
Sbjct: 180 EVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQH 239

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            N T+SAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      S
Sbjct: 240 ANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQS 299

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+
Sbjct: 300 LSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 344


>gi|169824785|ref|YP_001692396.1| peptide chain release factor 1 [Finegoldia magna ATCC 29328]
 gi|303235021|ref|ZP_07321645.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
 gi|238687758|sp|B0S2B6|RF1_FINM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167831590|dbj|BAG08506.1| bacterial peptide chain release factor 1 [Finegoldia magna ATCC
           29328]
 gi|302493876|gb|EFL53658.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
          Length = 355

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 192/347 (55%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +     EL
Sbjct: 5   LDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D +  ++ ++E  Q E     L     D  + ++E+ AGAGG E+ 
Sbjct: 65  LGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +++K+ + TE ++I      GIK   +++KG  AY  LK E GVHR+ 
Sbjct: 125 LFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + ++++I + D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPQTESSGRIHTSTATVAVLPEA-EDVDVKIEQKDLRIDVFRASGNGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNK +A  +L+++LY+L   + E+  +  ++ K+++G G  
Sbjct: 244 ITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDL--MEEEKNKDRADARKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N       + LDGD+++ +    +  +
Sbjct: 302 SERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347


>gi|146283509|ref|YP_001173662.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|166223591|sp|A4VPB9|RF1_PSEU5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145571714|gb|ABP80820.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 360

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 179/343 (52%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   +++     D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQSRFRAYSREYAEVEPVIVAYRQLCKVQQDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + +   K ++E  +   + +L      D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E L   +GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   +EI+ ++ RIDTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ+ERSQHKN+A+A   L AKL + +         I E+ K  +G G  
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQ--DAAAHKEISETRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   S ++V+ G ++  ++  L
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLL 347


>gi|56965632|ref|YP_177366.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
 gi|61214582|sp|Q5WB55|RF1_BACSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56911878|dbj|BAD66405.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
          Length = 356

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R  +LN +  DP++  N  + +   +E+  ++  +   ++ +    +L D   +
Sbjct: 5   LQAVEDRYEYLNEQLSDPNVISNATKLREYSKEQAQIEETVQTYRQYKQVTEQLADAKAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L++D   +++E  D L   K E+E   +   L     D  +  +E+   AGG E+Q
Sbjct: 65  LEEKLDDDMYQMVKEELDELSERKAELEERLKILLLPKDPNDDKNVIVEIRGAAGGDEAQ 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE + +KTE +E H  E  G K    ++ G  AY  LK E G HR+ 
Sbjct: 125 LFAADLYKMYHRYAEMQGWKTEVIEAHATELGGYKEIIFMVNGSGAYSKLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTESGGRIHTSTATVAVLPEA-EEVEIDIHEKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PT  VV CQ E+SQ KNK +A  +LRA++++    ++E  A   ES K  +G G  
Sbjct: 244 LTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARIFD--KVQQEAQAEYAESRKLAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQSRVTDHRIGLTLQKLEQVLQGKLDEIIDALVVADQ 347


>gi|317130773|ref|YP_004097055.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
 gi|315475721|gb|ADU32324.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
          Length = 357

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 114/352 (32%), Positives = 189/352 (53%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68
           +FD  +   +R   LN    DP +  +  + +   +E+  ++  +      KEI+ +  D
Sbjct: 1   MFDRLEAVEERYERLNELLMDPDVISDTKKLRDYSKEQSDIEETVQTFREYKEIKKQYTD 60

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
              +L E  L+++   +++   D L+     +E K +   L     D  +  +E+   AG
Sbjct: 61  AKTMLKEEDLDDEMYEMVKMEMDELEDQIPPLEEKLRVLLLPKDPNDDKNVIVEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + ++ E +E  + +  G K    +I G  AY  +K E G
Sbjct: 121 GDEAALFAGDLYRMYSRYAEAQGWRPEVIEASENDIGGYKEIIFMINGKGAYSKMKYENG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +E++I+E D R+DT+ +SG GGQ VNTT
Sbjct: 181 AHRVQRVPTTESGGRIHTSTATVAVLPEA-EEVEVDINEKDIRVDTFASSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +
Sbjct: 240 MSAVRLTHIPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD--KFRKEAEAEYAQNRKSAV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L+G LD+   A +  ++
Sbjct: 298 GTGDRSERIRTYNF-PQSRVTDHRIGLTLQKLDQILEGKLDEITDALIVEEQ 348


>gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB]
 gi|166977370|sp|A0LIZ8|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 355

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 188/349 (53%), Gaps = 18/349 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++  Q+   L     +P L  N  E + + RE   +   +      K +  +L D
Sbjct: 1   MFDRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAG 124
           N  LLE   +E D  + +     +  +K ++E  +   + +L      D  +  LE+ AG
Sbjct: 61  NQQLLE---QETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  + + L RMYTR+AE R++K E L+ H     G+K     + G  AY  LK E
Sbjct: 118 TGGEEAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHR+ R+   +S  R HTS  ++ V P   + +++ I  +D R+D +R+SG GGQ VN
Sbjct: 178 RGVHRVQRVPVTESQGRIHTSAVTVAVLPEA-EEVDVYIDPNDLRVDVFRSSGPGGQSVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+THIP+G+VV CQ E+SQHKNKA+A  +LRA+L  L+  + E+ A I    K+
Sbjct: 237 TTDSAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARL--LDQMQSEQEARIARDRKS 294

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++G G    +IR+Y   P   V D R N+       +L G LD+ +   
Sbjct: 295 QVGTGDRSERIRTYNF-PQNRVSDHRINLTLYKLDIILGGALDEIIDPL 342


>gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
 gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
          Length = 360

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + +    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCYTDWRQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + LQ  K   E  + +     L     D  +A++EV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E L  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
 gi|156866495|gb|EDO59867.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
          Length = 358

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 194/350 (55%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   ++    N K  DP +  +      LM+E + L+  +   KE + +  +   
Sbjct: 1   MFDRLEVFEKKYEECNQKLYDPAVVSDPEAYAALMKEVKGLEPVVEKYKEYKKQKNNEEE 60

Query: 72  LLEL----ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             +L     LE+D   +++ E  +  + ++   E  +   L     D  +  +E+  GAG
Sbjct: 61  AKQLLAEGGLEKDFREMVELELEEARESLEKISEELKILLLPKDPNDDRNVIVEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  ++  L RMY+ +AE +++KTE L  ++ E  G K  + +I G  AY  +K E G
Sbjct: 121 GEEAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ V P   + +E+EI+ SD +IDT+R+ GAGGQH+N T
Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLPEA-EDVEVEINPSDLKIDTFRSGGAGGQHINKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTE 305
           DSA+RITH+PTG+VV+CQ ERSQ+KNK +A  +L+++L E E +K++ E+A   +S    
Sbjct: 240 DSAIRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQNEVAQERKSQVGT 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +IR+Y   P   + D R  +      DV++G+LD+ + A +   +
Sbjct: 300 GDRSERIRTYNF-PQGRLTDHRIGLTLYRLEDVMNGNLDEVIDALITADR 348


>gi|94971498|ref|YP_593546.1| peptide chain release factor 1 [Candidatus Koribacter versatilis
           Ellin345]
 gi|119361503|sp|Q1II28|RF1_ACIBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94553548|gb|ABF43472.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 359

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 165/340 (48%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +   L      P +  +  + +   +    L   +   +E +D         ++
Sbjct: 5   LDLMEAKYDELTQALASPEIVNDSAKYQKTAKAHAELTQLVQKYREYKDLTRGIKDSRQM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +       L  ++  +    E  +   L     D  +  +E+ AG GG E+ 
Sbjct: 65  VAEETDAEMKAYAQQELTELEQRLHAVEEDLKVLLLPRDPNDDKNIIVEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE +++K E L   +    G+K    +I+G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYNRYAETQRWKVEVLSSSESGVGGLKEVIAIIEGRGAYSKLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + ++I+I   D RIDT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTETQGRVHTSAVTVAVLPEA-EEVDIKIEAKDIRIDTFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PT  VV CQ E+SQ KN+ +   +LRA+LYE+E QK+ + +A   +          
Sbjct: 244 ITHLPTNTVVSCQDEKSQIKNREKGMRVLRARLYEVEQQKQADALAKERKQQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R        S+ +DG ++  ++A 
Sbjct: 304 KIRTYNF-PQNRVTDHRIGYTVHQLSEFMDGKINALIEAL 342


>gi|229828875|ref|ZP_04454944.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
 gi|229792038|gb|EEP28152.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
          Length = 357

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 181/349 (51%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  +  +P +  +  +   LM+E+  L   +   +  Q +      
Sbjct: 1   MFDKLEDLVARYEEIMRQIAEPDIASDGAKFTELMKEQSELAPIVETFRAYQKQKQSIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LEL   E D  + Q   + L   +   E  +       L     D  +  +E+  GAGG
Sbjct: 61  SLELLDAESDEEMRQLAKEELAEARASAEELENQLKVLLLPKDSNDDRNVIIEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +  E +E+ +    G+K    +++G  AY  LK E GV
Sbjct: 121 DEAALFAAEVYRMYRHYAESRGWACEVMELEETGIGGMKKINFMVRGRGAYSTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I  +D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPATESGGRIHTSTVTVAVMPEAQE-VDVVIDPADIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY +E+ +++E A+    ++   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKNKAFALLRAKLYTMEMLRQQEEASARRLAQIGSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +L+GDL + + A +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDLQELLDALMAADQ 347


>gi|310779238|ref|YP_003967571.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
 gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
          Length = 357

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 182/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V++   L        + ++  +     +    +   +   KE +    D     E 
Sbjct: 5   LEEVVKKHEELTGLLGSSEVIKDPKKLIEYNKALNEITPVVEKYKEYKRYSDDLEFTKES 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + ++ I+  +    +  +   L     D  +  +E+  G GG E+ 
Sbjct: 65  LKVEKDHEMKEMLLEEMRDIEEVLPGLEQELRILLLPKDPNDDKNVIIEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+ K+KTE +   +    G+K     I+G  AY  LK E GVHR+ 
Sbjct: 125 LFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSIQGQGAYSKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P VDD  ++EI  S+ +IDT+R+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDTFRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+GV+V+CQ ERSQ KN+ +A  +L  KL+E+E++K+   + +  + K ++G G  
Sbjct: 245 ITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQR--SEVESTRKLQVGTGSR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGDL + + A +   +
Sbjct: 303 SEKIRTYNY-PQGRITDHRIKLTLHKLDAFLDGDLTEMIDALITFDQ 348


>gi|319951972|ref|YP_004163239.1| bacterial peptide chain release factor 1 (brf-1) [Cellulophaga
           algicola DSM 14237]
 gi|319420632|gb|ADV47741.1| bacterial peptide chain release factor 1 (bRF-1) [Cellulophaga
           algicola DSM 14237]
          Length = 372

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 177/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  N   QR   ++     P +  +      L +E + L + +       +   +   
Sbjct: 15  MLDKLNIVKQRFDEVSDLIIQPDVISDQKRYVELNKEYKDLKSLVDKRDLYIEFTNNVEE 74

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L+  K+ +    ++ + LL      DS +  +EV AG GG
Sbjct: 75  AQEIISDGSDAEMVEMAKMQLEEAKVGLPKLEEEIKVLLIPKDPEDSKNVVVEVRAGTGG 134

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E + +KT  +++ +G   G K     + G N YG LK E GV
Sbjct: 135 DEASIFAGDLFRMYTKYCESKGWKTNVIDLSEGTSGGYKEIQFEVTGDNVYGTLKFEAGV 194

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  +++I   D RID + +SG GGQ VNTT 
Sbjct: 195 HRVQRVPQTETQGRVHTSAATVMVLPEA-EDFDVQIEPKDVRIDFFCSSGPGGQSVNTTY 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEI 306
           SAVR+THIP+G+V QCQ ++SQHKNK +A+ +LR++LY+ EL +K+EE A    S  +  
Sbjct: 254 SAVRLTHIPSGLVAQCQDQKSQHKNKEKAFKVLRSRLYDQELAKKQEEDAAKRNSQVSSG 313

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y       V D R  +      ++++GD+   +   
Sbjct: 314 DRSAKIRTYNYS-QGRVTDHRIGLTLYDLQNIMNGDIQRIIDEL 356


>gi|225386765|ref|ZP_03756529.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
 gi|225047127|gb|EEG57373.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
          Length = 358

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 184/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L     DP + Q+      LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDKLDDILIHYEELMLMLGDPDVTQDTKRFTKLMKEQADLAPIVEAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  + E     L     D  +  LE+ AGAGG
Sbjct: 61  SLAMLEEESDEEMREMAKEELADAKKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT +A+ +++K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYTNYADSQRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I  +DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEA-EEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KL+++EL+KR+   A    S     
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDIELEKRQSSEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347


>gi|238019080|ref|ZP_04599506.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
 gi|237864335|gb|EEP65625.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
          Length = 360

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 186/345 (53%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L  +  DP +     E + L R+   L   +   +  +  L      +E+  +
Sbjct: 9   IEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLAGIDEAMEVIED 68

Query: 79  ED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  D    +   + L+ +K + E  +       L     D  +  +E+  GAGG E+  +
Sbjct: 69  KSMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+
Sbjct: 129 AGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P + + ++IE++E D +IDTYRASGAGGQH+N T+SAVRIT
Sbjct: 189 PATETQGRVHTSTVTVAVLPEM-EDVDIEVNEKDLKIDTYRASGAGGQHINKTESAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV CQ +RSQ +N+ +A  +LRAKL +    ++E I+++    K+++G G    
Sbjct: 248 HLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|224368815|ref|YP_002602976.1| PrfA [Desulfobacterium autotrophicum HRM2]
 gi|223691531|gb|ACN14814.1| PrfA [Desulfobacterium autotrophicum HRM2]
          Length = 391

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 18/357 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L   +N L G+       +R   L     DP +  + ++ +  ++E   L   +S   
Sbjct: 33  LDLQNMINKLQGI------KERYIKLENLLSDPAVIADQVKYQRCLKEHGELTKVVSAFA 86

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
           + Q  L       +LA +  D  I +   +    ++ + E  +       +     D  +
Sbjct: 87  DYQAVLQQMGEAKDLAKD-PDPDIREMAKEETADLRAQREGLESKLKLLLMPKDPRDDKN 145

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             LE+ AG GG E+  +A  L RMY+R+AE + +    +E       G K    +IKG  
Sbjct: 146 VILEIRAGTGGEEAGLFAADLFRMYSRYAEIKGWTVNVIESSHSSAGGFKEVISMIKGNG 205

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A+   K E G HR+ R+   ++  R HTS  ++ V P   + +E++I  S+ ++D +RAS
Sbjct: 206 AFSAFKYESGTHRVQRVPETETQGRVHTSAVTVAVLPEA-EDVELKIEPSELKVDVFRAS 264

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVRITH+PTG+V  CQ E+SQ KNK  A  +L+A++ +     RE+ A
Sbjct: 265 GPGGQSVNTTDSAVRITHLPTGIVATCQDEKSQIKNKIAALKVLKARILDA--MVREQEA 322

Query: 297 NIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                 K ++G G    +IR+Y   P   + D R  +      +++ GD+ D +   
Sbjct: 323 KRAAQRKGQVGTGDRSGRIRTYNF-PQGRMTDHRIGLTLYRLDNIMGGDIQDIIDEL 378


>gi|266621433|ref|ZP_06114368.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
 gi|288866872|gb|EFC99170.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
          Length = 358

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 184/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L  +  +P + ++    + LM+E+  L   +    E +        
Sbjct: 1   MFDKLDDILIHYEELMLELGNPSVTEDQNRFRRLMKEQADLAPLVETYTEYKKAKTAVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE+D  + +   + L   K ++E  + E     L     D  +  LE+ AGAGG
Sbjct: 61  SLAILDEENDEEMRELAKEELSDAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  ++E + +K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYVNYSESQHWKVELISVNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +++ I + DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEA-EDVDVVIEDKDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEI 306
           SAVR+THIPTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+   A    S     
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQNSEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDITELLDSLIAADQ 347


>gi|302536943|ref|ZP_07289285.1| peptide chain release factor 1 [Streptomyces sp. C]
 gi|302445838|gb|EFL17654.1| peptide chain release factor 1 [Streptomyces sp. C]
          Length = 359

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 178/347 (51%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     EL
Sbjct: 5   VEDLVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIETAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +   + +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEAKELSAQREELTEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + ++          G   +  +K E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVSVRTKGGNGATEPGQGVWARMKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +E+EI+ +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEVEVEINMNDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     +  E+ A+    S+  
Sbjct: 242 TDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDQRRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D RT  +  +   VLDGDLD  ++A +
Sbjct: 302 SVDRSEKIRTYNF-PENRISDHRTGFKAYNLDQVLDGDLDSVIQACV 347


>gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413]
 gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena
           variabilis ATCC 29413]
          Length = 292

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 131/283 (46%), Positives = 194/283 (68%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++EL   E D ++LQE    + ++  +++  + + LLSG  D+  A L ++AGAGGT++Q
Sbjct: 1   MVELLELETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMYTRWAE + +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 61  DWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D++++++I + D  I T R+ G GGQ+VN  ++AVR
Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H+PTG+ V+C +ERSQ +NK +A   L+AKL  +  +++ +          E  WG Q
Sbjct: 181 VVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+YV  PYQMVKDLRTN E T+ +DV++G+LD F++A L  +
Sbjct: 241 IRNYVFHPYQMVKDLRTNAETTAIADVMNGELDMFIQAYLRQE 283


>gi|315649892|ref|ZP_07902974.1| peptide chain release factor 1 [Paenibacillus vortex V453]
 gi|315274691|gb|EFU38073.1| peptide chain release factor 1 [Paenibacillus vortex V453]
          Length = 355

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 72  LLEL---ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +    ++++   +++   + L   + E+ E  +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKMDDEMREMVKMEIEELSTRERELAEKIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMPEA-EEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA++++  + ++EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKDKALQVLRARIFD--MMRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTIAEQ 347


>gi|254671653|emb|CBA09383.1| peptide chain release factor 1 [Neisseria meningitidis alpha153]
          Length = 372

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 23  LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 82

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 83  LSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 143 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 203 ATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 263 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 320

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 321 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 360


>gi|251789676|ref|YP_003004397.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
 gi|247538297|gb|ACT06918.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
          Length = 360

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     +  Q    D     EL
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQCWQQTQDDLATA-EL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+  K   E      Q   L     D    +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMRDLAQEELKAAKAASETLEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +   DGE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVVGDGAYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLDMLIQPIV 345


>gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424]
 gi|238692779|sp|B3R722|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG
           19424]
          Length = 360

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L        + +    D      L
Sbjct: 9   LDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQDDLATAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               DD  +    +D +   +  +E  Q   + LL      D  +  LE+ AG GG ES 
Sbjct: 69  L---DDPEMKDFAADEIAAARDRLEALQASLQRLLLPKDPNDDRNLLLEIRAGTGGEESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+++++ E +   + +  G K   + I G  A+  LK E G HR+ 
Sbjct: 126 LFAADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQHVN TDSAVR
Sbjct: 186 RVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQH+NK +A  +L A++ +++   R   A    + +  IG G  
Sbjct: 246 LTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQ--TRAAQAREASTRRNLIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++DGD+D+ + A  A
Sbjct: 304 SDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSALSA 346


>gi|156973278|ref|YP_001444185.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
 gi|156524872|gb|ABU69958.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
          Length = 260

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 152/258 (58%), Positives = 197/258 (76%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E 
Sbjct: 1   MEEKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F+ A+L 
Sbjct: 240 TQAVLDGDLDKFIGASLK 257


>gi|294341235|emb|CAZ89636.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As]
          Length = 358

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 4/342 (1%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            L D  +   +R   L+     P    ++   + + RE   L   +    + + +  D  
Sbjct: 4   SLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKTKTEDLS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               L  + D   + Q+   + +     +E   Q   L     DS + ++E+ AG GG E
Sbjct: 64  QAESLLSDPDMKELAQQEIQDARAALDALEARLQVALLPRDPDDSRNVFVEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE++++ TE +     +  G K   L + G  AYG LK E G HR
Sbjct: 124 SALFAADLLRMYARYAERKRWTTEVISESPSDLGGYKEVILRVAGEGAYGLLKYESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P VD++  I+I+ SD RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPKTETQGRIHTSAATVAVMPEVDEAQAIQINPSDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           +RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R+ E A   +S       
Sbjct: 244 IRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQARQAEEAATRKSLVGSGDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V + R N+       +LDGDLD+ + A 
Sbjct: 304 SDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTAL 344


>gi|299065550|emb|CBJ36721.1| peptide chain release factor RF-1 [Ralstonia solanacearum CMR15]
          Length = 356

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   ++  ++     +    D     EL
Sbjct: 5   LDQLAERTVEINALLAREDATANLDQYRKLTREHAEIEPVVAQYAAWKQAEDDVTTAQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++     +     +E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDEIRAAREHMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDL + + A  A
Sbjct: 303 IRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGALAA 342


>gi|167752375|ref|ZP_02424502.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
 gi|167660616|gb|EDS04746.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
          Length = 361

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +   +  K  DP +  +V +     +E + L+  I   +  +  + +     ++
Sbjct: 10  LDGLKLKYEEIGQKLTDPEVIADVKQFIQFNKEYRELEPIIEASERYRTAIANLAEAKDI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  + +     +  ++ ++E  +       +     D+ +A +E+  G GG E+ 
Sbjct: 70  LANDKDEEMREMARGEIAELEPKIETLEEEIKLLLIPKDPQDAKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMYT++ E + +K E     +G   G K   + + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLMRMYTKYIESKGWKYEITSFSEGTAGGYKEVVMKVTGNNVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EIS +D R D + ASG GGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEA-EEFDVEISMNDIRKDIFCASGPGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K  +EIA+  ++  +      
Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDEIASKRKTMVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 309 KIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 351


>gi|292488088|ref|YP_003530965.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|292899299|ref|YP_003538668.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291199147|emb|CBJ46261.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291553512|emb|CBA20557.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312172219|emb|CBX80476.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 360

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D +   E+
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQCQED-IAAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L   D  + +   D LQ  +   E  + +           D  + YLEV AG GG E+ 
Sbjct: 68  ML--GDAEMREMAQDELQAARATCEDLEQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++  +    +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIEPIV 345


>gi|91202802|emb|CAJ72441.1| strong similarity to protein chain release factor 2 (RF-2)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 316

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 144/296 (48%), Positives = 205/296 (69%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++E+Q    +   L++L  EE D     E   ++     ++E  +  ++L    D  +AY
Sbjct: 3   LQELQKTYEEIEFLVDLMDEESDERTTAEIVGDIALFTQKLEKLELHTMLGEAHDHCNAY 62

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L ++AGAGGTES DW +ML RMY+RWAEK       ++   GEEAG+K  T+LI+G   Y
Sbjct: 63  LSIYAGAGGTESCDWVSMLFRMYSRWAEKNGHTLSLIDSLAGEEAGLKRITVLIEGEYVY 122

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G LK E GVHRLVRISP+DSN+RRHTSF+++ V P +++  EIEI++++ ++DTYR+SGA
Sbjct: 123 GHLKSEIGVHRLVRISPFDSNARRHTSFAAVDVLPEIEEEEEIEINDNELQVDTYRSSGA 182

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SAVRITH+PTG+V+ CQ ERSQH+N+ +A NML+AK+Y+++ +++E   + 
Sbjct: 183 GGQHVNKTSSAVRITHLPTGIVIACQSERSQHQNRRRAINMLKAKIYQIKEKEKERELSA 242

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K EI WG QIRSYVLQPY +VKDLRT  E  +   +LDG+++ F++A L  K
Sbjct: 243 AYDEKGEIAWGNQIRSYVLQPYSLVKDLRTGKESGNTQAMLDGEIEGFIEAYLKWK 298


>gi|227328400|ref|ZP_03832424.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 248

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 153/247 (61%), Positives = 187/247 (75%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG K
Sbjct: 1   MFSGQYDSADCYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|311109118|ref|YP_003981971.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310763807|gb|ADP19256.1| peptide chain release factor 1 [Achromobacter xylosoxidans A8]
          Length = 360

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFARTEDDLAAAQEM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  S+ + E      +++      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LSDPDLKSMAEDEIKSGRAKLEELEAALQLLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+R ++ E +     E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAEQRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ +    D+  EI I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAIMAEADEMSEIVINPNDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + E   RE  +      K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKE--TRERQSKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       +++GDL++   A +A
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 346


>gi|282850388|ref|ZP_06259767.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294792026|ref|ZP_06757174.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
 gi|294793891|ref|ZP_06759028.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|282579881|gb|EFB85285.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294455461|gb|EFG23833.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|294457256|gb|EFG25618.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
          Length = 360

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 186/345 (53%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L  +  DP +     E + L R+   L   +   +  +  L      +E+  +
Sbjct: 9   IEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEVIED 68

Query: 79  ED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  D    +   + L+ +K + E  +       L     D  +  +E+  GAGG E+  +
Sbjct: 69  KSMDEEFREMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+
Sbjct: 129 AGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P + + ++IE++E D +IDTYRASGAGGQH+N T+SAVRIT
Sbjct: 189 PATETQGRVHTSTVTVAVLPEM-EDVDIEVNEKDLKIDTYRASGAGGQHINKTESAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV CQ +RSQ +N+ +A  +LRAKL +    ++E I+++    K+++G G    
Sbjct: 248 HLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL2A]
 gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. NATL2A]
          Length = 313

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 139/307 (45%), Positives = 198/307 (64%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+   +   +  +   +  + D  + +EL   + D  IL E  + L+++K E+E  + E
Sbjct: 1   MRQLDEVKAELEKLITWRGAIEDANLSVELYELDPDEEILSEAHNGLEQLKQELERWETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D   A L ++AGAGGT++QDWA MLLRMYTRWAE    K    E+ +GEEAGI
Sbjct: 61  RLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWAENNGMKVSINELSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D+ +E+EI E
Sbjct: 121 KSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  I T R+ GAGGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L++KL 
Sbjct: 181 KDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLM 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            + +++R            E  WG QIR+YV  PYQMVKDLRT  E T    V++G +D 
Sbjct: 241 VIAVEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGKIDI 300

Query: 346 FMKATLA 352
           F+++ L 
Sbjct: 301 FIQSLLR 307


>gi|294635783|ref|ZP_06714243.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
 gi|291090883|gb|EFE23444.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
          Length = 360

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + +    D     E+
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYVQLTDVSRCFLDWRQAQDDLETA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + ++  +  +    +  Q   L     D  + +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEEIKETRERLNELEQQLQILLLPKDPDDERNCFLEVRAGTGGDEAG 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRIEVMSASEGEHGGYKEVIAKVSGEGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR+ E A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQREEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIEPIV 345


>gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120]
 gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120]
          Length = 292

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 130/283 (45%), Positives = 195/283 (68%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++EL   E D ++LQE    + ++  +++  + + LLSG  D+  A L ++AGAGGT++Q
Sbjct: 1   MVELLELETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMYTRWAE + +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLV
Sbjct: 61  DWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+++N +R TSF+ + V P +D++++++I + D  I T R+ G GGQ+VN  ++AVR
Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H+PTG+ V+C +ERSQ +NK +A   L+AKL  +  +++ +          E  WG Q
Sbjct: 181 VVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+YV  PYQMVKDLRTN+E T+ +DV++G+LD F+++ L  +
Sbjct: 241 IRNYVFHPYQMVKDLRTNVETTAIADVMNGELDMFIQSYLRQE 283


>gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
 gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
          Length = 360

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +  + D+L   E+
Sbjct: 9   LEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRS-VQDDLDAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE  D  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  MLE--DPEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|254515300|ref|ZP_05127361.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
 gi|219677543|gb|EED33908.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
          Length = 361

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 7/336 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +   +R   ++    DP +  +  + + L RE   L+  +    E Q  L D    
Sbjct: 6   LLKLETLSERHEEVSALLGDPGVIADQDQFRQLSREYSELETVVKCFGEYQALLGDIEAA 65

Query: 73  LELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGT 128
             + L +DD  + +     +     + E    + + LL      DS++ +LE+ AG GG 
Sbjct: 66  QSM-LADDDADMREMAKAEISEGEARREALEAELQVLLLPRDPRDSHNVFLEIRAGTGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  L RMYTR+AE++ ++ E L    GE  G K     I+G + Y +LK E G H
Sbjct: 125 EAAIFSGDLQRMYTRFAERQGWRLEVLSERPGEHGGYKEIISRIEGTDVYAYLKFESGAH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ +    ++   IEI+++D R+DTYR+SGAGGQHVN TDS
Sbjct: 185 RVQRVPETESQGRIHTSACTVAILAEPEELEAIEINKADLRVDTYRSSGAGGQHVNKTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVR+TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL       +         +    G 
Sbjct: 245 AVRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLTSSAEAAQASEQAEQRRNLVGTGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
              +IR+Y   P   V D R N+      +V+ GD+
Sbjct: 305 RSDRIRTYNF-PQGRVTDHRINLTLYKLDEVMAGDM 339


>gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
 gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
          Length = 248

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 143/246 (58%), Positives = 191/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +  AD ++ ++++ AGAGGTE+ DWA+MLLR Y ++ EK+ FK E +E  +G+ AGI+
Sbjct: 1   MFANPADPSNCFIDIQAGAGGTEACDWASMLLRQYLKYCEKKGFKAEVMEETEGDVAGIR 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I+G  A+G L+ E GVHRLVR SP+DS   RHTSF+S++VYP VDDSIEIEI+ +
Sbjct: 61  SATLKIEGDYAFGHLRTETGVHRLVRKSPFDSAGGRHTSFASLFVYPEVDDSIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLR++LYE
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWAMLRSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++K+ E     E SKT++GWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 181 HEMRKQMEAQQKLEDSKTDVGWGHQIRSYVL-DQSRIKDLRTGVEISNTQKVLDGDLDPF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|284007355|emb|CBA72733.1| peptide chain release factor 1 [Arsenophonus nasoniae]
          Length = 349

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 111/335 (33%), Positives = 172/335 (51%), Gaps = 3/335 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R   +     D  +  +    + L +E   L +     +  +    D      L  +
Sbjct: 1   MQERYEEIQAHLVDAEVIADQERFRALSKEYAQLTDVTKCFQSWRAVQQDIETAETLLHD 60

Query: 79  EDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            +   + QE     ++   E E   Q   L     D  + +LE+ AG GG E+  +A  L
Sbjct: 61  PEMREMAQEELKEAKKRNEEFEQQLQILLLPKDPDDEKNCFLEIRAGTGGDEAAIFAGDL 120

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+AE R+++ E +   +GE  G K     + G + YG LK E G HR+ R+   +
Sbjct: 121 FRMYNRYAESRRWRIEVMNASEGEHGGYKEIIAKVSGDSVYGRLKFESGGHRVQRVPETE 180

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ +   +  +   +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITHIPT
Sbjct: 181 SQGRIHTSACTVAILAEIPATELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITHIPT 240

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIRSYV 316
           G+VV+CQ ERSQHKNKA+A ++L A++   E  ++RE  A+   +         +IR+Y 
Sbjct: 241 GIVVECQDERSQHKNKAKALSVLAARIRAAEVQKRREAEASERRNLLGSGDRSDRIRTYN 300

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             P   + D R N+      +V++G LD  ++  +
Sbjct: 301 F-PQGRITDHRINLTLYRLDEVIEGKLDMLIQPII 334


>gi|77164037|ref|YP_342562.1| peptide chain release factor 1 [Nitrosococcus oceani ATCC 19707]
 gi|254436043|ref|ZP_05049550.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
 gi|119361569|sp|Q3JDR4|RF1_NITOC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76882351|gb|ABA57032.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089154|gb|EDZ66426.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
          Length = 360

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 183/345 (53%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            +   +R   L     +P +     + + L +E   L+  I   ++ +     L ++  L
Sbjct: 9   LETLAERQQELTALLAEPEIASAQKKFRELSQEYAQLEPVIGCFRDFEQAQSVLNESKAL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGT 128
           L+    + D  +     + +   + ++E   ++  +LL  S   D  + +LE+ AG GG 
Sbjct: 69  LQ----DQDPELRVLAQEEIAAAEKKLERLDRELHTLLLPSDPNDKRNIFLEIRAGTGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMY R+AE+R ++TE +    GE  G K   + I G  AY  LK E G H
Sbjct: 125 EAALFASDLLRMYLRYAEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + P  ++  +I+I+ +D R+DT+RASGAGGQHVN TDS
Sbjct: 185 RVQRVPQTESQGRIHTSACTVAIMPEAEEIDDIDINPADLRVDTFRASGAGGQHVNKTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           A+RITH+ +G+VV+CQ ERSQHKN+A+A ++LR KL   E  K          S    G 
Sbjct: 245 AIRITHLASGIVVECQDERSQHKNRARAMSLLRTKLKSEEEAKLVAEETATRRSLIGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      ++L G+LD  +   +A
Sbjct: 305 RSERIRTYNF-PQGRVTDHRINLTLYKLDEILQGNLDAIIDPLVA 348


>gi|317486373|ref|ZP_07945201.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
 gi|316922362|gb|EFV43620.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
          Length = 329

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 154/320 (48%), Positives = 201/320 (62%), Gaps = 10/320 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------EDDCSILQETSDNLQR 94
           ++RE+  L+  +  +  +++     L   E+A E           D    L+  S  ++R
Sbjct: 1   MLREKSRLEAELDRLDTLKNCHASMLDWQEMAQELSGGAEIKEGGDAAEALESLSAEIER 60

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +E  +   LLS E D  DA LE+H GAGGTE+QDWA ML RMY RWA+   F  E 
Sbjct: 61  LTELLEETETNLLLSSEEDHADAILEIHPGAGGTEAQDWAQMLQRMYLRWADSHGFSVEE 120

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L+   G+EAGIKS +L I G N YG+LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P 
Sbjct: 121 LDFLPGDEAGIKSVSLRISGENVYGFLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPD 180

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             D IEIEI ESD R+D + ASG GGQ VNTT SAVRITHIP+G+ VQCQ ERSQH NK 
Sbjct: 181 AGDDIEIEIKESDLRVDIFCASGPGGQGVNTTYSAVRITHIPSGISVQCQNERSQHHNKD 240

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  +LR +LY+LEL KR+       + K  I +G QIR+Y LQPY++VKD R N E   
Sbjct: 241 SAMRILRGRLYDLELSKRDAARQAEYAGKNAISFGSQIRTYTLQPYRLVKDHRNNCEIGD 300

Query: 335 PSDVLDGDLDDFMKATLAIK 354
              VLDG +D  ++  L  +
Sbjct: 301 TDAVLDGRIDKLLRDYLLWQ 320


>gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
 gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
          Length = 358

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 120/360 (33%), Positives = 184/360 (51%), Gaps = 17/360 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M L  +L  L  +          + L  K  DP +  ++ E + L R+   L+  +   +
Sbjct: 1   MNLEPKLRELEAI---------YAELEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYR 51

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSND 116
             +    +     EL     D  + +     L+  +  +    E  +   L     D  D
Sbjct: 52  RYRQVRDEIAEAKELVG-GGDHELAELAKMELEEKEPLLGKIEEQLRVALLPKDPNDEKD 110

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+ AG GG E+  +A  L RMY+R+AE+  +K E ++ ++ E  G K   L I G  
Sbjct: 111 VIMEIRAGTGGDEASLFAADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRG 170

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            Y  LK E GVHR+ R+   ++  R HTS +++ V PV  D I+IEI   D +IDTYR+S
Sbjct: 171 VYSQLKYESGVHRVQRVPATEAGGRIHTSAATVVVMPVA-DDIDIEIRPEDLKIDTYRSS 229

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EI 295
           GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ KN+A+A  +L+ +LY+ E++K+    
Sbjct: 230 GAGGQHVNMTDSAVRITHLPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQRSAE 289

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +          +IR+Y   P   V D R  +       ++DGDL + +KA +  ++
Sbjct: 290 SAERKGMIGSGDRSERIRTYNY-PQNRVTDHRIGLTLYKLEYMMDGDLYEMIKALVMAEQ 348


>gi|269798159|ref|YP_003312059.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
 gi|269094788|gb|ACZ24779.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
          Length = 360

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 186/345 (53%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L  +  DP +     E + L R+   L   +   +  +  L      +E+  +
Sbjct: 9   IEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEVIED 68

Query: 79  ED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  D    +   + L+ +K + E  +       L     D  +  +E+  GAGG E+  +
Sbjct: 69  KSMDEEFREMAQEELKELKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+ R+
Sbjct: 129 AGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P + + ++IE++E D +IDTYRASGAGGQH+N T+SAVRIT
Sbjct: 189 PATETQGRVHTSTVTVAVLPEM-EDVDIEVNEKDLKIDTYRASGAGGQHINKTESAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV CQ +RSQ +N+ +A  +LRAKL +    ++E I+++    K+++G G    
Sbjct: 248 HLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|331002270|ref|ZP_08325789.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411364|gb|EGG90780.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 355

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 9/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++ V     +  +     +  +    + LM+E+  L   +      K+ +    D
Sbjct: 1   MFDNLEDIVIHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +LE+  +++   + +E     +R++ E+ E  +   L     D  +  LE+ AGAGG
Sbjct: 61  ALEMLEM-NDDEMKEMAKEELAEGKRLEEELSEKLKILLLPKDPNDEKNIMLEIRAGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +AE + +K E +++++    G K    ++ G  AY  LK E GV
Sbjct: 120 DEAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGV 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +S+ V P   + ++++I  +D RID  RASG GGQ VNTTD
Sbjct: 180 HRVQRVPETESGGRIHTSTASVAVMPEA-EEVDVQIDMNDVRIDVMRASGNGGQCVNTTD 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYE+EL+K++        S+   G
Sbjct: 239 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQSAEAADRRSQIGTG 298

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +++GD+ + +   +A  +
Sbjct: 299 DRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQ 346


>gi|15925108|ref|NP_372642.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927692|ref|NP_375225.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283771|ref|NP_646859.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486911|ref|YP_044132.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652140|ref|YP_186925.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160795|ref|YP_494718.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196022|ref|YP_500835.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148268569|ref|YP_001247512.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394633|ref|YP_001317308.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|151222234|ref|YP_001333056.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980433|ref|YP_001442692.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510323|ref|YP_001575982.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141637|ref|ZP_03566130.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315787|ref|ZP_04839000.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253731044|ref|ZP_04865209.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733048|ref|ZP_04867213.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006906|ref|ZP_05145507.2| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793876|ref|ZP_05642855.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|258407044|ref|ZP_05680194.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|258422066|ref|ZP_05684983.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|258433565|ref|ZP_05688638.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|258440460|ref|ZP_05690630.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|258445668|ref|ZP_05693846.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|258450122|ref|ZP_05698217.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|258453423|ref|ZP_05701405.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|262049285|ref|ZP_06022160.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262052620|ref|ZP_06024814.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|269203754|ref|YP_003283023.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894762|ref|ZP_06302988.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|282923106|ref|ZP_06330791.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282929042|ref|ZP_06336627.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|284025152|ref|ZP_06379550.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           132]
 gi|294850088|ref|ZP_06790825.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|295407048|ref|ZP_06816850.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296275403|ref|ZP_06857910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297210061|ref|ZP_06926454.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246047|ref|ZP_06929904.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300910424|ref|ZP_07127876.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304379299|ref|ZP_07362038.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54039049|sp|P66019|RF1_STAAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54039050|sp|P66020|RF1_STAAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041594|sp|P66018|RF1_STAAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56749376|sp|Q6G7J2|RF1_STAAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153097|sp|Q5HE82|RF1_STAAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361613|sp|Q2FF10|RF1_STAA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361614|sp|Q2FWE0|RF1_STAA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223609|sp|A7X4W4|RF1_STAA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172048990|sp|A6QIW2|RF1_STAAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039994|sp|A6U3K3|RF1_STAA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039995|sp|A5IUR3|RF1_STAA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039996|sp|A8YY83|RF1_STAAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13701912|dbj|BAB43204.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247891|dbj|BAB58280.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21205213|dbj|BAB95907.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245354|emb|CAG43829.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286326|gb|AAW38420.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126769|gb|ABD21283.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203580|gb|ABD31390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741638|gb|ABQ49936.1| bacterial peptide chain release factor 1 (bRF-1) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149947085|gb|ABR53021.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375034|dbj|BAF68294.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722568|dbj|BAF78985.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160369132|gb|ABX30103.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253725232|gb|EES93961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728956|gb|EES97685.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787848|gb|EEV26188.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|257841377|gb|EEV65821.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|257841966|gb|EEV66398.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|257849296|gb|EEV73275.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|257852529|gb|EEV76447.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|257855507|gb|EEV78444.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|257856596|gb|EEV79502.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|257864404|gb|EEV87150.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|259159490|gb|EEW44540.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|259162650|gb|EEW47217.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262076044|gb|ACY12017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941717|emb|CBI50124.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282589348|gb|EFB94440.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|282593297|gb|EFB98294.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282762850|gb|EFC02984.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|285817782|gb|ADC38269.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981]
 gi|294823036|gb|EFG39468.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|294968073|gb|EFG44100.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296885261|gb|EFH24201.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177046|gb|EFH36301.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300888266|gb|EFK83457.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302751999|gb|ADL66176.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342158|gb|EFM08058.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312830470|emb|CBX35312.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128789|gb|EFT84789.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196948|gb|EFU27290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140710|gb|EFW32562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143686|gb|EFW35463.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314803|gb|AEB89216.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723967|gb|EGG60491.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726324|gb|EGG62792.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729314|gb|EGG65722.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 358

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY++++  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKV--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|311747486|ref|ZP_07721271.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
 gi|126574844|gb|EAZ79215.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
          Length = 315

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 142/309 (45%), Positives = 204/309 (66%), Gaps = 2/309 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ Q      +  + ++  + D  +L E    ++     +E S   ++ K  VE  + +
Sbjct: 1   MKQIQARKTWTTSYENLEKAIEDLEVLYEFYSADEVSE--EEMSREFEKAKSTVEELELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            +LS E D  +A LE++ GAGGTES DWA++L+RMY  W EK  +K   +++  G+ AGI
Sbjct: 59  KMLSSEEDQLNAVLEINPGAGGTESNDWASILMRMYIMWGEKNGYKVREVDVQQGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TL  +GP AYG+LK E GVHRLVRISP+DS  RRHTSF+S++ YP VDDSIEI+I+ 
Sbjct: 119 KSCTLEFEGPLAYGFLKSETGVHRLVRISPFDSGGRRHTSFASVYAYPEVDDSIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  + T R+ GAGGQ+VN  ++ V++TH PTG+VV CQ ERSQ  N+ +A  ML+++L+
Sbjct: 179 ADIELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQIERSQLANREKAMQMLKSRLF 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LE++KR       ESSK  + +G QIR+YVL PY++VKD RT  E +    VLDG L++
Sbjct: 239 QLEVEKRNAEIAKIESSKLRVDFGSQIRNYVLHPYKLVKDARTGHETSDTQHVLDGGLNE 298

Query: 346 FMKATLAIK 354
           FMKA L  +
Sbjct: 299 FMKAYLLAQ 307


>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
 gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
          Length = 361

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R + +      P   ++  + + L +E   L+      K   D          +
Sbjct: 9   LEGLAERHAEIAQLLATPDAAEDADQLRRLSQEYSQLEPVAEAWKAWHDNQAALEEARAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  +       ++ +  + E  + E     +     D+ + +LE+ AG GG E+ 
Sbjct: 69  -LAEDDPELRAMAEAEIETLADQAEALEAELHRHLIPKDPHDNANVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE++ +K E L   +GE  G +     + G  AY  LK E G HR+ 
Sbjct: 128 IFAGDLLRMYTRYAEQQNWKLEILSASEGEHGGYREVIARLAGQGAYSRLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P +D+    +I+ +D R+DT+RASGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSAATVAILPELDEVEMPDINPADLRVDTFRASGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV+CQ+ERSQHKN+A+A   L A+L+E E + +    +    S    G    
Sbjct: 248 LTHLPTGIVVECQEERSQHKNRAKAMTYLAARLFEAEREAQAAAQSAERKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+       V+ GDLD  +   +
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLEQVMAGDLDPVIDPLI 347


>gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
 gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
          Length = 248

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 141/246 (57%), Positives = 185/246 (75%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +  AD   A+L++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    +   G+ AGIK
Sbjct: 1   MFNNPADPLPAFLDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEDETPGDTAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I+G  A+G L+ E GVHRLVR SP+DS+  RHTSF+SI+VYP +DD+IEIEI+ +
Sbjct: 61  SATIKIEGDYAFGLLRTETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDTIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYD 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR E     E +KT++GWG QIRSYVL     +KDLRTN E ++   VLDGDLD F
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVL-DQSRIKDLRTNYETSATQKVLDGDLDPF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|302036343|ref|YP_003796665.1| peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
 gi|300604407|emb|CBK40739.1| Peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
          Length = 386

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 129/345 (37%), Positives = 189/345 (54%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLIL 72
           W+    R   L  +  DP +         L +ER  L+          E + +L D   L
Sbjct: 35  WEGMAARFQELTNQLMDPSVLNQPGMIHKLNKERTELEEPALQFIAYCEAKKQLEDVSAL 94

Query: 73  LELALE-EDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTES 130
           L+ A    D   +  E SD+LQ+  LE+E++  + L      D  + +LE+ AG GG E+
Sbjct: 95  LQDASTGADMKQLFAEESDHLQQQVLEIEHRAKDFLTPKDPRDEKNMFLEIRAGTGGDEA 154

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE+ + K E ++  +    G +    L++G  AYG L+ E GVHR+
Sbjct: 155 ALFAGDLFRMYLKYAERNRLKLEVVDASETGIGGYREVIALLEGKGAYGRLRYESGVHRV 214

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS  ++ V P V D +E+ I   D RIDT+ +SGAGGQ VNTT SAV
Sbjct: 215 QRVPTTEASGRIHTSTVTVAVMPEV-DEVEVHIDPKDLRIDTFCSSGAGGQSVNTTYSAV 273

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTGVVV CQ ERSQ KN+ +A   LRA++ E E +K+E  A I ++ K+++G G 
Sbjct: 274 RITHIPTGVVVSCQDERSQLKNRTKAMRNLRARIVEAEREKQE--AEIAQNRKSQVGTGD 331

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R  +       VL GDL++ ++A  A
Sbjct: 332 RSEKIRTYNF-PQNRVTDHRIGLTVHKLDQVLAGDLEEIVQALRA 375


>gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848773|gb|EDK25691.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 356

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 186/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  + +  + LM+E+  L   +    E +    +   
Sbjct: 1   MFDRLEDLLIRYEEVMGELQEPGVADDPVRFRKLMKEQSDLAPIVEAYNEYKQCRQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   +  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLEEESDEEMRELAKEELSDSRKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMPEA-EEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K++        S+   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQASEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQ 347


>gi|312112637|ref|YP_003990953.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
 gi|311217738|gb|ADP76342.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
          Length = 358

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +   +R   LN    DP +  +  + +   +E+  L+  +   +E +    +L D   +
Sbjct: 5   LEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVRKQLDDAKAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E  D L++ + E+  K    L      D  +  +E+ A AGG E+ 
Sbjct: 65  LEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G HR+ 
Sbjct: 125 LFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++   P + + IE+EI+E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVACLPEM-EEIEVEINEKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G G  
Sbjct: 244 LTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYD--KYQQEARAEYDQTRKQAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQ 347


>gi|282859886|ref|ZP_06268974.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
 gi|282587289|gb|EFB92506.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
          Length = 374

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 118/359 (32%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L      +           +T+ P  W++   A+  M++ + ++  +    + 
Sbjct: 10  ILSRTDALYHYLGIEQKRIEFEEEQLRTQAPDFWEDPDRAREQMKKVKEIERWVKGYDKA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  +  +  +   +E      +E      ++   +E  + +++L  + D  +  ++++
Sbjct: 70  RAQAEELQLAFDFYKDE--LVTEEEVDAIYNKVVATIEDLELKNMLRQQEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I  G+EAGIKS T+  + G  A+G+L
Sbjct: 128 SGAGGTESQDWADMLMRMYMRWGEAHGYKVTISDIQVGDEAGIKSVTMKFEGGEYAFGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E++K +I WG QIRSYV    + VKD RTN + +    V++G LD F+KA L 
Sbjct: 308 EAQAKVEAAKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDSVMNGKLDGFIKAYLM 365


>gi|325128768|gb|EGC51631.1| peptide chain release factor 1 [Neisseria meningitidis N1568]
          Length = 358

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELSPVVEVFQHYRRAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|189183642|ref|YP_001937427.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180413|dbj|BAG40193.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 287

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 159/276 (57%), Positives = 210/276 (76%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A++E+D   +       ++++ E +  Q E L + + D ND +L+++AGAGGTES DWA+
Sbjct: 5   AIKENDIEFIHNIEQEWKKLQEEAKKLQVECLFTSDVDVNDCFLDINAGAGGTESNDWAS 64

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           M+LRMY R+AE   FKTE + + DGEEAG+KSA++ I G NAYGW K E GVHRLVR SP
Sbjct: 65  MMLRMYLRFAESMNFKTEVVYLLDGEEAGVKSASVKICGHNAYGWFKTESGVHRLVRNSP 124

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +++  +R TSF+S WVYPV++D+I++ I + D RIDTYRASGAGGQHVNTTDSA+RITH 
Sbjct: 125 FNALGKRMTSFASAWVYPVINDNIQVVIEDKDIRIDTYRASGAGGQHVNTTDSAIRITHF 184

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PT +VVQCQ +RSQHKNKA+A  ML+AK+YELE +K+ EI N   ++KT+  WG  IRSY
Sbjct: 185 PTKIVVQCQNDRSQHKNKAEAMRMLKAKIYELEQKKQNEIINNHNAAKTDNSWGYHIRSY 244

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VLQPYQ+VKDLRTN+E +    VLDGDL+ F+ A+L
Sbjct: 245 VLQPYQLVKDLRTNVETSDTKRVLDGDLEKFIYASL 280


>gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18]
 gi|166223577|sp|A1KV95|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18]
 gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
 gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
 gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
          Length = 358

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|258453172|ref|ZP_05701163.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
 gi|257859118|gb|EEV81975.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
          Length = 358

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKGKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY++++  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKV--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114]
 gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114]
          Length = 358

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   +   +    +      D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAEITPVVETFHQYMQAQNDMAEAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATENQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|298208407|ref|YP_003716586.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
 gi|83848330|gb|EAP86199.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
          Length = 316

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 139/308 (45%), Positives = 206/308 (66%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E       +   ++    + D  ++ E   E +         +   + K  +E  +F+
Sbjct: 1   MKELNVKKTWVEDYEQAITFVEDLEVIFEFYKEGEAEET--NVKERYAKAKDLIEDLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA ML+RMY  WAEKR FK + L + +G+ AGI
Sbjct: 59  NMLSEEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWAEKRGFKIKELNLQNGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ +L I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEI+I+ 
Sbjct: 119 KTVSLEIEGNFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   D  R+SGAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++LY
Sbjct: 179 ADISWDFARSSGAGGQNVNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++   +  ESSK +I WG QIR+YV+ PY++VKD+RT  E  +   V++GD+D 
Sbjct: 239 EIELRKQQAQRDEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGDIDA 298

Query: 346 FMKATLAI 353
           F+KA L  
Sbjct: 299 FLKAFLMA 306


>gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 357

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  K  DP +  +  + K + RE   L   +    EI+          EL
Sbjct: 5   LEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E +D  ++      +   K  +E      +   +     D  D  +E+ AGAGG E+ 
Sbjct: 65  LKEAEDKEMIDLLKAEIDENKKNLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAGGEEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K+ +KTE +++      G+K AT +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D ++I+I  +D R D YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEA-DEVDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQ KNK +A  +LRA+LYE+E +KR+    I ++ K+++G G  
Sbjct: 244 LTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQ--KEISDNRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N       D LDG++++ + + +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIDSLITEDQ 347


>gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
 gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
          Length = 358

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|283850912|ref|ZP_06368198.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
 gi|283573835|gb|EFC21809.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
          Length = 357

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 173/342 (50%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  ++   L  +  DP +  +    + L +    + + ++  +E +    D     E+
Sbjct: 5   LESLERKYVELEKQLSDPSVVNDQERYRKLTKAHADMADMMAAFREHKQLSRDLEENQEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  + +     ++ IK  +   +             D  +  LE+ AG GG E+ 
Sbjct: 65  AQD-PDPEMRELALAEIKAIKEALPEIEARLKLLLLPKDPMDDKNILLEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE R++K E +   +    G K     I G   Y  LK E G HR+ 
Sbjct: 124 LFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASIAGDKVYSRLKYESGAHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + +++ I  +D RID YR+SG GGQ VNTTDSAVR
Sbjct: 184 RVPATESQGRIHTSAVTVAIMPEA-EEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+P+G+VV CQ E+SQHKNKA+A  +LR++L ++E +K+         S+   G    
Sbjct: 243 VTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQRLEQEATRRSQVGTGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       VL+GDLD+  +  +A
Sbjct: 303 RIRTYNF-PQSRVTDHRINLTLYRLEAVLEGDLDELCEGLIA 343


>gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 353

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 127/345 (36%), Positives = 187/345 (54%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP   +++ E K + +E   L+  +   +E +  L D     E+
Sbjct: 5   LKTIEDRYVELSRKLSDPESMKDMDEWKKMAKEHASLEEIVQKYREYKKVLDDIKSTKEI 64

Query: 76  ALEEDD-CSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              +DD   + QE   +L+  +   +   +   L     D  D  +E+ AGAGG E+  +
Sbjct: 65  IELDDDLKDMAQEELKSLEERENKLLNEIKLLLLPKDPNDEKDVIMEIRAGAGGEEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT +AEK+ +K E +  +  E  G K   L I G  AY  LK E GVHR+ RI
Sbjct: 125 AYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNIAGKGAYSRLKFESGVHRVQRI 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P V + ++IEI+ +D +ID +R+ G GGQ VNTTDSAVR+T
Sbjct: 185 PTTEAGGRIHTSTATVAVLPEV-EDVDIEINPNDIKIDVFRSGGHGGQSVNTTDSAVRLT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+V+ CQ ERSQ +N+ +A  +LRAKLY  E+ + E+   I  + K ++G G    
Sbjct: 244 HIPTGIVISCQDERSQLQNRERAMKILRAKLY--EMAREEKEKEISMTRKLQVGTGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDGDLD+ + A LA  +
Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQ 345


>gi|258645288|ref|ZP_05732757.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
 gi|260402638|gb|EEW96185.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
          Length = 360

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 183/343 (53%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            D    R   L  +  DP +  N  + + L +E   L   ++  +  +       + + +
Sbjct: 6   LDAMEARFRSLEDQLSDPSVISNQNKWRTLSKEHSDLGEIVTLYRSYKKVDKTCKEAVNI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQ 131
           LE   + D   + +E     +++K E++ +    L      D  +  LE+ AG GG E+ 
Sbjct: 66  LEDKSQSDLHELAKEELKEAEKMKNELDKQIHFLLIPKDPNDGKNVILEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL+MY ++AE + ++ E  + ++ +  G +  T +I G NAY  LK E GVHR+ 
Sbjct: 126 LFAADLLKMYLKFAENKGWRVELADANETDLGGFREVTCIIYGKNAYSLLKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P V ++++I+I+  D RID YRASGAGGQH+N T SA+R
Sbjct: 186 RIPATESQGRVHTSAVTVAVLPEV-ENVDIDINRDDLRIDVYRASGAGGQHINKTSSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV CQ ERSQ +NK +A  +L+A+LY+  +  RE         K ++G G  
Sbjct: 245 ITHIPSGMVVTCQNERSQRQNKEKALQILKARLYDRAV--RESQDKTAADRKGQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+      + L+G++D  +   +
Sbjct: 303 SERIRTYNF-PQGRVTDHRVNVSVYQLDNFLNGNMDGILDVLI 344


>gi|258422882|ref|ZP_05685782.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
 gi|257846906|gb|EEV70920.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
          Length = 358

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESSGIKAELPNIEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY++++  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKV--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|49484342|ref|YP_041566.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82751719|ref|YP_417460.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257426257|ref|ZP_05602672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428915|ref|ZP_05605309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431524|ref|ZP_05607897.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257434233|ref|ZP_05610583.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257437146|ref|ZP_05613186.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282904787|ref|ZP_06312661.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906462|ref|ZP_06314313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909431|ref|ZP_06317246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911683|ref|ZP_06319482.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914967|ref|ZP_06322747.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917467|ref|ZP_06325220.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920296|ref|ZP_06328020.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282925507|ref|ZP_06333161.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283771286|ref|ZP_06344175.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958898|ref|ZP_06376343.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293509035|ref|ZP_06667822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510950|ref|ZP_06669649.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547552|ref|ZP_06672227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295428705|ref|ZP_06821331.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297589815|ref|ZP_06948455.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|56749405|sp|Q6GEV7|RF1_STAAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361615|sp|Q2YUN5|RF1_STAAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49242471|emb|CAG41187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82657250|emb|CAI81691.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257270962|gb|EEV03135.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274257|gb|EEV05774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277765|gb|EEV08435.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257280872|gb|EEV11017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283539|gb|EEV13666.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282312908|gb|EFB43309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316156|gb|EFB46537.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318669|gb|EFB49026.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321170|gb|EFB51501.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324448|gb|EFB54761.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326701|gb|EFB56999.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330412|gb|EFB59930.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282594820|gb|EFB99797.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|283459491|gb|EFC06584.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283789616|gb|EFC28439.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919672|gb|EFD96745.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094739|gb|EFE25011.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466235|gb|EFF08762.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|295127375|gb|EFG57015.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576943|gb|EFH95657.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695392|gb|ADI98614.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302333764|gb|ADL23957.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|312437464|gb|ADQ76535.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315193283|gb|EFU23681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|323439333|gb|EGA97057.1| peptide chain release factor 1 [Staphylococcus aureus O11]
 gi|323442458|gb|EGB00087.1| peptide chain release factor 1 [Staphylococcus aureus O46]
          Length = 358

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY++++  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKV--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL1A]
 gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           NATL1A]
          Length = 313

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 139/307 (45%), Positives = 199/307 (64%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+   +   +  +   +  + D  + LEL   + D  IL E  + L+++K E++  + E
Sbjct: 1   MRQLDEVKAQLEKLITWRGAIEDANLSLELYELDLDEEILSEAHNGLEKLKQELDRWETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D   A L ++AGAGGT++QDWA MLLRMYTRWA+    K    E+ +GEEAGI
Sbjct: 61  RLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D+ +E+EI E
Sbjct: 121 KSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  I T R+ GAGGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L++KL 
Sbjct: 181 KDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLM 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            + L++R            E  WG QIR+YV  PYQMVKDLRT  E T    V++G++D 
Sbjct: 241 VIALEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGEIDI 300

Query: 346 FMKATLA 352
           F+++ L 
Sbjct: 301 FIQSLLR 307


>gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
 gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
          Length = 358

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 182/346 (52%), Gaps = 8/346 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D   +  +RL  +      P    ++   + L +E   L   +   ++ +    D  
Sbjct: 4   SVLDKLQSLSERLEEVTALLSTPEATVDINRFRQLNQEHAELTPVVEAYRQYRQAESDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              ++  + +      E  +  +     ++   Q   L   E D  + +LEV AG GG E
Sbjct: 64  DAEDMLADPEMKDFAAEEIEAAKAKIETLDTELQKLLLPKDEDDGKNIFLEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMYTR+AE+ +++ E +  ++ +  G K     I G  AYG LK E G HR
Sbjct: 124 AALFAADLLRMYTRYAERNRWQVEIVSANESDLGGYKEVIARIAGIGAYGRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  EI+++ ++ RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPAELRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G
Sbjct: 244 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQ--KREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+       V+DGD+++   A +A
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITNALIA 346


>gi|37525987|ref|NP_929331.1| peptide chain release factor 1 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|46576710|sp|Q7N586|RF1_PHOLL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|36785417|emb|CAE14363.1| Peptide chain release factor 1 (RF-1) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 360

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +  +  K       D     E+
Sbjct: 9   LEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTNCFKAWSAVQDDLKAA-EI 67

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + ++  K       +  Q   L     D  + +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEEIRDAKVRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  +DGE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWKVEVISANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   EIS SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVLPEIPDAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR+E  A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQEAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLVQPIV 345


>gi|261821677|ref|YP_003259783.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
 gi|261605690|gb|ACX88176.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
          Length = 360

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+  K  +E      Q   L     D    +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWRVEVVSASEGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVV 345


>gi|325263710|ref|ZP_08130443.1| peptide chain release factor 1 [Clostridium sp. D5]
 gi|324030748|gb|EGB92030.1| peptide chain release factor 1 [Clostridium sp. D5]
          Length = 357

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 187/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  + +  + LM+E+  L+  +   +E +    +   
Sbjct: 1   MFDRLEDLLIRYEEVMGELQEPDVANDPVRFRKLMKEQSDLNPIVEAYREYKKSKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLEEESDEEMREMAKEELNDSKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVHYAEGRRWKVEMISLNENGIGGFKECVFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMPEA-EEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KL++LEL+K++        S+   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDLELEKQQASEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQ 347


>gi|28897286|ref|NP_796891.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839363|ref|ZP_01992030.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308094351|ref|ZP_05888606.2| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308095310|ref|ZP_05904925.2| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308125643|ref|ZP_05776404.2| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
 gi|28805495|dbj|BAC58775.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747111|gb|EDM58099.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308088411|gb|EFO38106.1| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308093009|gb|EFO42704.1| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308113324|gb|EFO50864.1| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
          Length = 260

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 151/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E 
Sbjct: 1   MEEKLAQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|169832291|ref|YP_001718273.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|238688348|sp|B1I6L2|RF1_DESAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169639135|gb|ACA60641.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 355

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 184/345 (53%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+   +   LN    DP + Q+    +  ++    +   ++  +E +    +     ++
Sbjct: 5   LDHLEAKYEELNRLISDPVVIQDQERWRGYVKSHAEIGEVVAVYREYKRVAAEMDDARQM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     ++ ++   +  +             D  +  +E+ AG GG E+ 
Sbjct: 65  LREEQDAELRELAESEVEVLRERSDELRRRLRVLLLPKDPNDEKNVIIEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+R ++ E L +++ +  GIK A +L++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLLRMYLRYAERRGWRAEMLNVNETDLGGIKEAIVLLEGRGAYSELKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +++EI   D RID + ++G GGQ VNTT SAVR
Sbjct: 185 RVPATESGGRIHTSAATVAVLPEA-EEVDVEIRPEDLRIDVFCSTGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +TH+P+G+VV CQ E+SQHKN+ +A  +LRA+L +  + +++E IA+  ++         
Sbjct: 244 VTHLPSGIVVSCQDEKSQHKNRDKAMKVLRARLLDKAQQEQQERIASSRKTQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+      +VL GDL +F+ A +   +
Sbjct: 304 RIRTYNF-PQNRVTDHRLNLTLYRLEEVLQGDLHEFVSALITSDQ 347


>gi|218768706|ref|YP_002343218.1| peptide chain release factor 1 [Neisseria meningitidis Z2491]
 gi|20139350|sp|Q9JT75|RF1_NEIMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121052714|emb|CAM09057.1| peptide chain release factor I [Neisseria meningitidis Z2491]
          Length = 358

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIA 346


>gi|21223720|ref|NP_629499.1| peptide chain release factor 1 [Streptomyces coelicolor A3(2)]
 gi|256785187|ref|ZP_05523618.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|289769080|ref|ZP_06528458.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|20139352|sp|Q9K4E4|RF1_STRCO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|8568782|emb|CAB94531.1| peptide chain release factor 1 (RF-1) [Streptomyces coelicolor
           A3(2)]
 gi|289699279|gb|EFD66708.1| peptide chain release factor 1 [Streptomyces lividans TK24]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 175/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     E 
Sbjct: 5   VEELVAEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRSWKQTGDDMETAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +  ++     E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKELDKQRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERIGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + I++EI+ +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEIDVEINPNDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     ++ E+ A     S+  
Sbjct: 242 TDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDSVIQACV 347


>gi|238797830|ref|ZP_04641323.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
 gi|238718358|gb|EEQ10181.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
          Length = 360

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 181/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +  +  KE +    D++   E+
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTNCFKEWRST-QDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  ML--DDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G  A+G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGTGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|298245470|ref|ZP_06969276.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
 gi|297552951|gb|EFH86816.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 188/345 (54%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN     P +  ++   +   RE+  L   +    E+ D         E+
Sbjct: 7   LATLATRYEELNNLMAQPDVLTDISLLQRYGREQSELSTVVEKYHELIDTDKQIKEAQEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             + ++  +     + L+++K      +E  Q   L     D  +A + +  GAGG E+ 
Sbjct: 67  -YDSEEGELRDMAFEELEQLKARKEQLLEDVQVALLPKDIMDEKNAVVTIQGGAGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+A+ R++K E L+ +D E+ G K  T +I+G  AY  +K E G HR+ 
Sbjct: 126 LFAADLFRMYSRYADGRRWKIEILDGNDTEQGGFKDITFVIRGKGAYSRMKYEGGTHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++N R HTS + + V P  DD I+IE+ ++D R+D YR++G GGQ VNTTDSAVR
Sbjct: 186 RVPSTEANGRIHTSTAKVIVLPEADDDIQIEVKDADIRVDVYRSTGHGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV CQ E+SQ KNK +A N+L+++L++LE  KR+E       S+ + G    
Sbjct: 246 ITHLPTGLVVTCQDEKSQLKNKQKALNVLKSRLWDLEEAKRQEELGKARRSQVQTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  + + +   +LDG LD+F+   + + +
Sbjct: 306 KIRTYNF-PQDRVTDHRIGLTRHNLPGILDGSLDEFIDNLITVDQ 349


>gi|293609440|ref|ZP_06691742.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827892|gb|EFF86255.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122703|gb|ADY82226.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2]
          Length = 362

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 168/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + +  E+E       +     DSN AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIQANKTLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|257467857|ref|ZP_05631953.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185]
 gi|317062146|ref|ZP_07926631.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
 gi|313687822|gb|EFS24657.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 182/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   LN     P +  +  +     +    +   +   KE +  + D   + E 
Sbjct: 5   LEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSEITPIVEKYKEYKRVVEDFDFIKEN 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L+ ++  +    +  +   L   E D  +  +E+  GAGG E+ 
Sbjct: 65  LKTEKDQDMREMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++K+K E +E  +    GIK A   I G  AY  LK E GVHR+ 
Sbjct: 125 LFAGNLFRMYSRYAERKKWKMEIIEKQEMGIGGIKEAVFSINGFGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN TDSAVR
Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++VQCQ ERSQ KN+ +A   L +KL+E+E    ++ + +    + ++G G  
Sbjct: 245 ITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEME--CEKQRSQVESERRLQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R           LDGDLD+ + A +   +
Sbjct: 303 SEKIRTYNY-PQGRITDHRIKFTVYQLEAYLDGDLDEMIDALITFSQ 348


>gi|254805442|ref|YP_003083663.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
 gi|254668984|emb|CBA07320.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  K E  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KHEAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|189502103|ref|YP_001957820.1| peptide chain release factor 1 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692309|sp|B3ES89|RF1_AMOA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189497544|gb|ACE06091.1| hypothetical protein Aasi_0702 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 176/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   ++ +  DP +  ++ +   L +  + L   +      +  L +      L
Sbjct: 5   LEAIEKKYEEVSKQIVDPSIMADMKQYASLNKTYKELSKIVDVYTVYKSNLANLESAKTL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D +      + +  ++L+     E  +F  L     DS +  LE+ AG GG E+ 
Sbjct: 65  LSIEKDAAFRDLAKEEIDSLELQKTQLEEDLKFLLLPKDPNDSKNVILEIRAGTGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK ++K   +E  +    G K     I G  AYG LK E GVHR+ 
Sbjct: 125 IFAGDLFRMYSRFAEKMQWKLSIIEEVESTSGGYKEIICSIAGEGAYGMLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P + D +E+++  +D R DT+ +SG GGQ VNTT SA+R
Sbjct: 185 RVPATETQGRIHTSAASVVVLPEM-DEVEVDLDMNDIRKDTFCSSGPGGQSVNTTYSAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTG+VV CQ E+SQ KN  +A  +LRA+LYE EL+K+++       S  + G    
Sbjct: 244 LTHIPTGIVVSCQDEKSQIKNLEKALKVLRARLYEQELKKQQDAIGAERRSMVKSGDRSD 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R      +   V+DG + D ++A 
Sbjct: 304 KIRTYNF-PQGRVTDHRIGYTIHNLPAVMDGAVGDLIEAL 342


>gi|227486771|ref|ZP_03917087.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235241|gb|EEI85256.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 129/345 (37%), Positives = 192/345 (55%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  K  DP +  ++ + + + +E   L   +   +EI++         EL
Sbjct: 5   LEHVRENYKQLEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAENQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E DD  ++Q   D ++  K ++E    + + LL      D  D  +E+  GAGG E+ 
Sbjct: 65  INEADDQDMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K  FKTE +E++     GIK AT +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLYRMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V D +E+ I  +D R D YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEV-DEVELHIDPNDIRTDVYRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q E+SQ KNK +A  +LRA+LYELE QKR +EIA+  +S         
Sbjct: 244 LTHIPTGLVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNKEIADNRKSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N       D L+GD++D + + +A  +
Sbjct: 304 RIRTYNF-PQGRITDHRINKTIYQLDDFLNGDIEDMINSLIAEDQ 347


>gi|302380176|ref|ZP_07268648.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
 gi|302311959|gb|EFK93968.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
          Length = 355

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 192/347 (55%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +     EL
Sbjct: 5   LDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D +  ++ ++E  Q E     L     D  + ++E+ AGAGG E+ 
Sbjct: 65  LGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +++K+ + TE ++I      GIK   +++KG  AY  LK E GVHR+ 
Sbjct: 125 LFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + ++++I + D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPQTESSGRIHTSTATVAVLPEA-EDVDVKIEQKDLRIDVFRASGNGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNK +A  +L+++L++L   + E+  +  ++ K+++G G  
Sbjct: 244 ITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLFDL--MEEEKNKDRADARKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N       + LDGD+++ +    +  +
Sbjct: 302 SERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347


>gi|227111330|ref|ZP_03824986.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 360

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRTLSREYAQLTDITGCFQQWQQAQEDQQTA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+  K  +E      Q   L     D    +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVV 345


>gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
 gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
          Length = 360

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRNDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       ++   + +   + +E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDEIRSARERMVRLEGELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A + 
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVT 346


>gi|212640540|ref|YP_002317060.1| peptide chain release factor 1 [Anoxybacillus flavithermus WK1]
 gi|212562020|gb|ACJ35075.1| Protein chain release factor A [Anoxybacillus flavithermus WK1]
          Length = 361

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 184/354 (51%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65
           +  +FD  +    R   LN    DP +  +  + +   +E+  L   +   +E +   ++
Sbjct: 1   MRKMFDRLEAVEARYEKLNELLMDPEVLNDPKKLRDYSKEQSDLAETVQTYREYKSVREQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    L+  + ++  K    L      D  +  +E+   
Sbjct: 61  LADAKAMLEEKLDPDMRDMVKEEISELEEREEQLVEKLKVLLLPKDPNDDKNVIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMYTR+AE + +KTE +E H     G K    +I+G  AY  LK E
Sbjct: 121 AGGEEAALFAGDLYRMYTRYAESQGWKTEVIEAHPTGLGGYKEIIFMIQGKGAYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++   P +++      +E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVACLPEMEEIEIEI-NEKDIRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYD--KYQQEARAEYDQTRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       VL+G LD+ + A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLEGKLDEIIDALILDDQ 350


>gi|88803826|ref|ZP_01119349.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
 gi|88780354|gb|EAR11536.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 7/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P    +      LM+E + L N +    E Q  + +     E+  E
Sbjct: 8   VKQRYDEVSDLIIQPATIMDQKRYAQLMKEYKDLGNVVEKGDEYQALIDNIEEAKEILAE 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  + +     +      +    E  +F  + +   DS +A +E+ AG GG E+  +A
Sbjct: 68  GSDAEMNEMAKSEIDEANSRIPKLEEEIRFLLIPTDPEDSKNAVVELRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++ E + +K   ++  +G   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYSKYCESKGWKVATVDYSEGTNGGFKEIQFEVNGADVYGTLKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS ++  V+P   +  ++EI+  D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATCMVFPEA-EEFDVEINPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K+     +   S    G    +IR
Sbjct: 247 VPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKNAEDALKRGSMVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y       V D R  +      ++++GD+   +   +  +
Sbjct: 307 TYNYA-QGRVTDHRIGLSLYDLPNIMNGDIQRVIDELMLAE 346


>gi|86134218|ref|ZP_01052800.1| peptide chain release factor 1 [Polaribacter sp. MED152]
 gi|85821081|gb|EAQ42228.1| peptide chain release factor 1 [Polaribacter sp. MED152]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 174/341 (51%), Gaps = 7/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P +  +      LM+E + L + +    E Q  + +     E+  +
Sbjct: 8   VKQRYDEVSDLIIQPEIIMDQKRYAQLMKEYKDLGDVVKKGDEYQTLMNNIEEAKEIIAD 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  + +     ++     +    E  +F  +     D+ +A +E+ AG GG E+  +A
Sbjct: 68  GSDAEMTEMAKMQMEEANTRIPELEEEIKFLLIPKDPEDAKNAVVELRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + +K   ++  +G   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYTKYCESKGWKVSTVDYSEGTNGGFKEIQFEVNGDDVYGILKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS ++  V+P   +  ++EI+  D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATCMVFPEA-EEFDVEINPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++    +   S    G    +IR
Sbjct: 247 IPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQAEDALKRGSMVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y       V D R  +      ++++GD+   +   +  +
Sbjct: 307 TYNYA-QGRVTDHRIGLSLYDLPNIMNGDIQKIIDELMLAE 346


>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
 gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
          Length = 360

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 181/337 (53%), Gaps = 3/337 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  L+         +++   + L RER  ++  ++  +E +    D     EL
Sbjct: 9   LEHLANRLEELDRTLASEEGARDMNAFRELSRERAEIEPVVALYREHRLAEADCATAREL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + + E ++   RI+      Q   L     D+ + +LE+ AG GG E+  +A
Sbjct: 69  LADPEMRELGELELAEGEARIEALEAELQRALLPRDPNDARNLFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++++K E +   + +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWKVEIVSASESDLGGYKEVIARVVGNGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   ++I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 VTETQGRIHTSACTVAVLPEADEVEAVDINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIR 313
           IPTG+VV+CQ +RSQH+NKAQA  +L A+LY+     ++   A   +S         +IR
Sbjct: 249 IPTGIVVECQDDRSQHRNKAQAMAVLAARLYDARVRAQQSAEAAQRKSLVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   V D R N+       V+ G+LD+ + A 
Sbjct: 309 TYNF-PQGRVTDHRINLTLYKLDAVMQGELDEIVDAL 344


>gi|50121117|ref|YP_050284.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
 gi|61214611|sp|Q6D551|RF1_ERWCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49611643|emb|CAG75092.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 360

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+  K  +E      Q   L     D    +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMRDMAQEELKEGKAAIEALEQELQVLLLPKDPDDERGCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++   +I+ SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMAAVPEAELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQPVV 345


>gi|299537972|ref|ZP_07051258.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
 gi|298726554|gb|EFI67143.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
          Length = 358

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 108/351 (30%), Positives = 178/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E +      + 
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKSVKEQLVD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   +    +K + E  +     LL      D+ +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V + +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEV-EEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ +  +  +E    I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVAD--MYMQEAQKEIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A +  ++
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDALILEEQ 347


>gi|308186585|ref|YP_003930716.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
 gi|308057095|gb|ADO09267.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
          Length = 360

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 174/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     ++
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQEDIETAQQM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     + LQ  + + +  + +           D    ++EV AG GG E+ 
Sbjct: 69  L---DDPEMRDMAQEELQEAREKSDVLEQQLQVLLLPKDPDDERACFIEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG +K E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEARRWRVEIVSANEGEHGGYKEVIARVTGDGAYGRMKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L ++++  E+ +R         +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARRHAAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEPIV 345


>gi|300814565|ref|ZP_07094819.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511333|gb|EFK38579.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 358

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 11/343 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELA 76
             R + L     D ++  N    +    E   L   +S  +E +   + L D+  LL   
Sbjct: 9   EDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKALLAEK 68

Query: 77  LEEDDCSILQE-TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           L++D   ++++  S N + ++   E  +   +     D  +  +E+ AGAGG E+  +A 
Sbjct: 69  LDDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L R Y R+AE+  +K + +  ++    G K    +I G  AY  LK E GVHR+ R+  
Sbjct: 129 TLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P V + +E+EI  ++ + D +RASG GGQ VNTTDSAVR+THI
Sbjct: 189 TESGGRIHTSTATVAVLPEV-EDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAVRLTHI 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V+ CQ E+SQ  NK +A  +LRAKLY+L++  +E+         +++G G    +I
Sbjct: 248 PTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKI--QEQNEKNSAQRLSQVGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N        + DG+LD+ + A  A  +
Sbjct: 306 RTYNY-PQGRVTDHRINYTTHQIDSINDGELDELIDALTAADQ 347


>gi|296137058|ref|YP_003644300.1| peptide chain release factor 1 [Thiomonas intermedia K12]
 gi|295797180|gb|ADG31970.1| peptide chain release factor 1 [Thiomonas intermedia K12]
          Length = 358

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 184/342 (53%), Gaps = 4/342 (1%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            L D  +   +R   L+     P    ++   + + RE   L   +    + + +  D  
Sbjct: 4   SLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKAKTEDLS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               L  + D   + Q+   + +     +E   Q   L     DS + ++E+ AG GG E
Sbjct: 64  QAESLLSDPDMKELAQQEIQDARAALDALEAQLQVALLPRDPDDSRNVFVEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE++++ TE +     +  G K   L + G  AYG LK E G HR
Sbjct: 124 SALFAADLLRMYARYAERKRWATEVISESPSDLGGYKEVILRVAGEGAYGLLKYESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P +D++  I+I+ SD RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPKTETQGRIHTSAATVAVMPEMDEAQAIQINPSDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           +RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R+ E A   +S       
Sbjct: 244 IRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQSRQAEEAATRKSLVGSGDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V + R N+       +LDGDLD+ + A 
Sbjct: 304 SDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTAL 344


>gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD]
 gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
 gi|122324144|sp|Q0BIQ0|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689166|sp|B1YSD5|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           ambifaria AMMD]
 gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
          Length = 360

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRNDETAAQEL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       + E     +R+       Q   L     D  + +LE+ AGAGG ES  +A
Sbjct: 69  LADASMRDFAEDEIRSARERMVRLEAELQKMLLPKDPNDDRNIFLEIRAGAGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ + A + 
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVT 346


>gi|304397559|ref|ZP_07379436.1| peptide chain release factor 1 [Pantoea sp. aB]
 gi|304354731|gb|EFM19101.1| peptide chain release factor 1 [Pantoea sp. aB]
          Length = 360

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 174/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     ++
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQEDIETAQQM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     + LQ  + + +  + +           D    ++EV AG GG E+ 
Sbjct: 69  L---DDPEMRDMAQEELQEAREKNDVLEQQLQVLLLPKDPDDERACFIEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARVTGDGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L ++++  E+ +R         +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARRHAAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEPIV 345


>gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
          Length = 355

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 172/341 (50%), Gaps = 8/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   +   L  +   P ++ +    K + +    L + +   +E +    D     E+
Sbjct: 5   LEDIEIKYDKLEYELAQPGIFNDQERYKKVSKAHSDLSDVVVLYREYKKCSKDLAENREM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +  D  I +     +  ++  +E  +       L S   D  +  LE+ AG GG E+ 
Sbjct: 65  SHD-PDPEIREMAKAEISELEDRIETLEEKIKILLLPSDPMDEKNIILEIRAGTGGDEAG 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE  ++K E +  +     G+K     I G   Y  LK E G HR+ 
Sbjct: 124 LFAADLYRMYTRYAEANRWKVEEMSSNVTGSGGLKEVIASIAGDKVYSKLKYESGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + ++I++   D R+D +R+SG GGQ VNTTDSA+R
Sbjct: 184 RVPATESQGRIHTSVVTVAIMPEA-EEVDIDLRPEDVRVDVFRSSGPGGQSVNTTDSAIR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTG++V CQ E+SQHKNKA+A  +LR++L +LE  K +   +     +   G    
Sbjct: 243 VTHIPTGMIVICQDEKSQHKNKAKALKVLRSRLLQLEQDKAKAEEDAARRIQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+       +L+G+LDD   A +
Sbjct: 303 RIRTYNF-PQGRVSDHRINLTLHKLPQILEGELDDLTDALI 342


>gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
 gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
          Length = 360

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +  + D+L   E+
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRS-VQDDLEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE  D  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  MLE--DLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKVSGEGVFGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|184153097|ref|YP_001841438.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
 gi|238058717|sp|B2G676|RF1_LACRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183224441|dbj|BAG24958.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
          Length = 360

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 111/355 (31%), Positives = 184/355 (51%), Gaps = 14/355 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65
           +  +FD       R   LN    DP +  +      L +E   L   +    + +     
Sbjct: 1   MEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQT 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHA 123
           + D+  LL    ++D  ++ +E     +  + ++E K+ E LL      D  +  +E+  
Sbjct: 61  ISDDEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIRG 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK 
Sbjct: 120 AAGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKF 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 180 ENGAHRVQRVPVTESAGRVHTSTATVGVMPEA-EDVDVDIDPKDIRVDVYRSSGAGGQHV 238

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+    +++E +   +  K
Sbjct: 239 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY--YQQQEQSAYDQKRK 296

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 297 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 350


>gi|308126586|ref|ZP_05911115.2| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
 gi|308107642|gb|EFO45182.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
          Length = 260

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 150/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ D++D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E 
Sbjct: 1   MEEKLAQLEFRRMFSGDHDNSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
 gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
          Length = 360

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 184/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   +     D  +  + +  + L RE   L +     K+      D     ++
Sbjct: 9   LQALQERYEEVEAHLGDAEVISDQLRFRTLSREYAQLKDISLCFKQWDGLQEDIETAKKM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K+  E      Q   L     D  D +LE+ AG GG E+ 
Sbjct: 69  L---DDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E + I++GE+ G K     I G   YG LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V PV+ ++  +EIS++D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPKTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E E QKR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RSRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDILIEPIV 345


>gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
 gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
          Length = 358

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 174/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N   RL  +      P    N+   + L +E   L   +           D     E+
Sbjct: 9   LQNLSHRLEEVTALLGSPEATANMDSYRRLNQEHAELTPIVDTYHAYTQAQSDLADAQEM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E       I+      Q   L     D  + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAFEEIQAAKDTIERLDLELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++TE +   + +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRLVGLGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE+++ D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NK +A  +L A+L +++  KRE  A      K+ IG G    +
Sbjct: 249 LPTGLVVECQDGRSQHTNKEKALKVLAARLNDIQ--KREAHAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGD+D+   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMDEITSALIA 346


>gi|227535953|ref|ZP_03966002.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771659|ref|ZP_07081534.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|227244196|gb|EEI94211.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300761648|gb|EFK58469.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 283

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 138/271 (50%), Positives = 197/271 (72%)

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            +  QE     Q    ++E  +F+++LS E D  DA L++ AGAGGTES DWA ML+RMY
Sbjct: 9   DATEQELESQYQTALQDIEELEFKNMLSAEEDQLDAILQITAGAGGTESCDWAAMLMRMY 68

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
             W EK   K    +  +G+ AGIK+ TL   G  AYG+LKGE GVHRLVRISP+DSN++
Sbjct: 69  IMWGEKHGCKVTEQDSQEGDVAGIKTVTLQFSGNFAYGYLKGENGVHRLVRISPFDSNAK 128

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S++VYP++DD+IEI++ +S+   DT+R+ GAGGQ+VN  ++AVR+ H PTG+++
Sbjct: 129 RHTSFASVYVYPLIDDNIEIDVKDSEIEWDTFRSGGAGGQNVNKVETAVRLHHKPTGIII 188

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           + Q+ RSQ +NK  A  +L+++LYE+E++KR+E   + E SK +I WG QIR+YVL PY+
Sbjct: 189 KNQETRSQLQNKENALRLLKSQLYEIEMRKRQEATAVIEGSKKKIEWGSQIRNYVLHPYK 248

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +VKDLRT++E ++   VLDGD+D F+KA L 
Sbjct: 249 LVKDLRTSVETSNTQAVLDGDIDMFLKAYLM 279


>gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica ST-640]
 gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06]
          Length = 358

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDALDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|255020676|ref|ZP_05292738.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
 gi|254969912|gb|EET27412.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
          Length = 365

 Score =  294 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 127/359 (35%), Positives = 184/359 (51%), Gaps = 15/359 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M LS +L         +   +R   L      P + Q+    +   RE   +   +  ++
Sbjct: 1   MSLSPRLEA-----QLEQLAERAEELQKALASPEIVQDNARFQAFSRELGEIQPILELLQ 55

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSND 116
             +++        EL L E D  +     ++ +  + E+    E  Q   L     D  +
Sbjct: 56  AHEEQRQRWDEARELLLAERDPELRALAEEDQREAEAELARIEESLQVRLLPRDPNDERN 115

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            +LE+ AG GG E+  +A  L RMYTR+AE R F    L   + E  G K   L I G  
Sbjct: 116 VFLEIRAGTGGEEAALFAADLARMYTRYAEGRGFGVTVLSSTESERGGYKEIVLEISGRG 175

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E G HR+ R+   +S  R HTS  ++ V P VD   EI I  SD RIDTYRAS
Sbjct: 176 AYSRLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVDAVHEIHIQPSDLRIDTYRAS 235

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN TDSA+RITH+PTG+VV CQ++RSQHKN+A+A  +L+A+L  LE+ + ++ +
Sbjct: 236 GAGGQHVNKTDSAIRITHLPTGLVVACQEDRSQHKNRARAMALLQARL--LEMVREQQES 293

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +   + ++ IG G    +IR+Y   P   + D R N+       VL G+LD  +   + 
Sbjct: 294 STAATRRSLIGSGDRSERIRTYNF-PQGRITDHRINLTIYRLEAVLAGELDALIDPLIR 351


>gi|269959607|ref|ZP_06173988.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
 gi|269835665|gb|EEZ89743.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
          Length = 260

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 152/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E 
Sbjct: 1   MEQKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIAIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|167855181|ref|ZP_02477952.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219871045|ref|YP_002475420.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
 gi|167853726|gb|EDS24969.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219691249|gb|ACL32472.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
          Length = 248

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 146/247 (59%), Positives = 189/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD  +IEI+ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDFDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKKNAEKQAMEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
           2594]
          Length = 358

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/341 (36%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
 gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
          Length = 358

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|320174901|gb|EFW50020.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112]
          Length = 360

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L++ K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGCLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|152986475|ref|YP_001350646.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
 gi|166223587|sp|A6VC61|RF1_PSEA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150961633|gb|ABR83658.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
          Length = 360

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 176/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + +   +  +    +  Q   L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPELRDLAEEEVAEARERLAALGDSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGENVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A   L AKL +   Q+      I  + K  +G G  
Sbjct: 248 ITHLPSGIVVECQEERSQHKNRAKAMAWLAAKLND--QQQAAAQQAIASTRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 358

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [marine bacterium HP15]
          Length = 362

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 182/337 (54%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++    D  +     + + L RE   ++  +   +  Q  L D     EL
Sbjct: 9   LEQLSDRFEEVSALLSDSSIISQQDKFRDLSREFAEIEPIVHCFQAWQHSLDDIEAAREL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  + +   + LQ  + + E      Q   L     D  + +LE+ AG GG E+ 
Sbjct: 69  AKD-GDADMREMAEEELQLAEQKSEELDEELQRLMLPKDPNDGKNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+R+++ E L   +GE  G K     + G   YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARVAGDGVYGALKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D++  IE++++D R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L   E +++++ +A   +S         
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQQKSMAETRKSLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +IR+Y   P   V D R N+      +V+ GDLD  +
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLDAVV 343


>gi|119897272|ref|YP_932485.1| peptide chain release factor 1 [Azoarcus sp. BH72]
 gi|166223529|sp|A1K443|RF1_AZOSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119669685|emb|CAL93598.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 361

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 117/338 (34%), Positives = 178/338 (52%), Gaps = 3/338 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL+ L+ +       +++   + L RER  L+  ++     +    D     EL
Sbjct: 9   LEHLAGRLAELDRELSSEDATRDMNAFRDLSRERAELEPVVALYGAYRQAEQDCATAREL 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +   E      RI       Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMQELGRSELEAGEARIAALDGDLQRALLPRDPNDERNLFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+++++ E +  +  +  G K     I G  AY  LK E G HR+ RI 
Sbjct: 129 GDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARIVGAGAYSRLKFESGGHRVQRIP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   +EI+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 VTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV+CQ +RSQH+NKAQA  +L A+L + +L+ R+        S    G    +IR
Sbjct: 249 LPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRARQSAEAATRRSLIGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R N+       V+ G+LD+ + A +
Sbjct: 309 TYNF-PQGRVTDHRINLTLYKLDAVMQGELDELLAALV 345


>gi|304386835|ref|ZP_07369099.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
 gi|304339089|gb|EFM05179.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
          Length = 358

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIA 346


>gi|225075789|ref|ZP_03718988.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
 gi|224952871|gb|EEG34080.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
          Length = 358

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRITDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
 gi|166223564|sp|A6SUF6|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 360

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  LN          N+   + + RE   L   ++     +    D      +
Sbjct: 9   LDQLTERLDELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYRQADSDIQDAQGM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE     +    ++E   Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LSDPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +     E  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  RE+ +    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDL +   A  A
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAA 346


>gi|167750775|ref|ZP_02422902.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|167656210|gb|EDS00340.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|291530723|emb|CBK96308.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum 70/3]
 gi|291557765|emb|CBL34882.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum V10Sc8a]
          Length = 358

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 185/348 (53%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +N K  D ++  +  + K LM+E ++L   I   +  +    D     ++
Sbjct: 5   LEITEKRFDEINEKLTDINVINDQEQYKSLMKELKNLTPIIEKYRMYKTARSDFEEAEQM 64

Query: 76  ----ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
                L++D   I+QE  ++ +++  E  +  +   L     D  +  +E+  GAGG E+
Sbjct: 65  LSDGGLDKDFKEIVQEQYESNKKLMDEYTDELKILLLPKDPDDDRNVIIEIRGGAGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +AN + RMY+ +A+ + +KTE +  +  E  G K  +  ++G   Y  LK E GVHR+
Sbjct: 125 ALFANSMFRMYSMYAQTKGWKTEVISSNPTELGGYKEISFSVEGEGVYAKLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R  TS  ++ V P V + +++EI+ +D    TYR+SGAGGQH+N T+SA+
Sbjct: 185 QRVPETEAQGRIQTSTITVAVLPEV-EEVDVEINPADLEFQTYRSSGAGGQHINKTESAI 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H PTGVVV+CQ+ERSQ+KNK +A  ML +KLYE +L   E+ + I    K ++G G 
Sbjct: 244 RIIHHPTGVVVECQEERSQYKNKDKAMKMLYSKLYEAKLN--EQNSKIAAERKIQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +        ++GD D+   A     +
Sbjct: 302 RSERIRTYNY-PQSRVTDHRIGLTLYKLEQFMNGDCDEVFDALAIADR 348


>gi|307722037|ref|YP_003893177.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306980130|gb|ADN10165.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 355

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 109/336 (32%), Positives = 178/336 (52%), Gaps = 9/336 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R + L+     P +  ++     L +E+  L   +   KE +  + +     E+  + + 
Sbjct: 12  RYNELSEMLSSPDITSDIKRMTELSKEQSSLLPIVEKTKEYKALIEEISDSKEMLSDPEM 71

Query: 82  CSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + +E    L+ ++ L  E  +   L     D  +  +E+ AGAGG E+  +   L   
Sbjct: 72  GDMAKEELKELEPQVPLIEEEIKMLLLPKDPNDDRNIIVELRAGAGGDEAAIFVGDLFDA 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTR+A+ + +K E +     +  G K    LIKG   Y  LK E G HR+ R+   +S  
Sbjct: 132 YTRYADLKGWKIELMSSSPSDAGGYKEVVALIKGEQVYSRLKYEGGTHRVQRVPQTESQG 191

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P V D +EIEI+E+D +ID  R+SG GGQ VNTTDSAVRITH+P+G+V
Sbjct: 192 RVHTSAITVAVMPEV-DDVEIEINENDLKIDVMRSSGCGGQSVNTTDSAVRITHLPSGLV 250

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVL 317
           V  Q ++SQHKN+ +A  +L+A+LY+L++  +E  A        ++G G +   IR+Y  
Sbjct: 251 VTNQDQKSQHKNREKAMKVLKARLYDLQM--QEAQAEDAAQRAAQVGTGDRSGRIRTYNY 308

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            P   + D R N+     ++++ G  LD+ ++  +A
Sbjct: 309 -PQNRISDHRINLTLYRLNEIMSGGLLDEIIEPLIA 343


>gi|283471335|emb|CAQ50546.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 358

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 184/347 (53%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   + E+
Sbjct: 5   LDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELADIEEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD   ++   +    IK E+    E  +   +     D  D  +E+ A AGG E+ 
Sbjct: 65  LSETDDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G HR+ 
Sbjct: 125 IFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG V+    E+SQ +N+ +A  +L+A+LY++++  +EE        K+ +G G  
Sbjct: 244 ITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKV--QEEQQKYASQRKSAVGTGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 301 SERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|329296264|ref|ZP_08253600.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +E Q    D     E+
Sbjct: 9   LEALQERHEEVEALLGDAGVIGDQDRFRALSREYAQLSDVTRCFREWQQVQEDVETA-EM 67

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+    + ++  +  Q   L     D    ++EV AG GG E+ 
Sbjct: 68  LL--DDAEMRDMAQEELKLSRDKREVLEQQLQVLLLPKDPDDERPCFIEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  +DGE  G K     I G  AYG +K E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEARRWQVEIMSANDGEHGGYKEVIARITGDGAYGRMKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPKLPEAELPDINPGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR+   A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRQAAEASTRRNLLGSGDSSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDTLIEPIV 345


>gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118]
 gi|119361589|sp|Q21YY9|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax
           ferrireducens T118]
          Length = 366

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 178/342 (52%), Gaps = 11/342 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE- 79
            RL  L        + Q++ +  +L RE   +    S     Q    D     EL     
Sbjct: 14  DRLGELEFLLSREDIMQDMKQFLLLSREHTEVGAVASRWARYQQLEADLSGAQELLRGSV 73

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  +     + +     E++  + E     L     D+ +A++E+ AG GG ES  +A 
Sbjct: 74  DDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPDDARNAFVEIRAGTGGDESALFAA 133

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LLRMYTR+ E+R +K E +     E  G K   + I+G + YG LK E G HR+ R+  
Sbjct: 134 DLLRMYTRYCERRGWKAEIISESPSELGGYKEVVIKIEGDHVYGALKFESGGHRVQRVPV 193

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            ++  R HTS  ++ V    D+++ I+I+ +D RIDTYRASGAGGQH+N TDSAVRITH+
Sbjct: 194 TETQGRIHTSACTVAVLAEPDEAVAIQINPADLRIDTYRASGAGGQHINKTDSAVRITHL 253

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V +CQ  RSQH NKAQA  +L A++   E  + E  A      K  IG G    +I
Sbjct: 254 PTGIVAECQDGRSQHSNKAQALKVLTARI--HEKDRSERAAKDAAERKGLIGSGDRSDRI 311

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           R+Y   P   + D R N+       +++GDLDD ++A  A +
Sbjct: 312 RTYNF-PQGRLTDHRINLTLYKLLTIMEGDLDDVVQALQAFE 352


>gi|188534015|ref|YP_001907812.1| peptide chain release factor 1 [Erwinia tasmaniensis Et1/99]
 gi|238689693|sp|B2VEH7|RF1_ERWT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188029057|emb|CAO96925.1| Peptide chain release factor 1 (RF-1) [Erwinia tasmaniensis Et1/99]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQSQEDIETA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L   D  +     + LQ  +       +  Q   L     D  + YLEV AG GG E+ 
Sbjct: 68  ML--SDAEMRDMAQEELQTARAASEELEQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVVGEGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++  +    +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIEPIV 345


>gi|319637760|ref|ZP_07992526.1| peptide chain release factor 1 [Neisseria mucosa C102]
 gi|317400915|gb|EFV81570.1| peptide chain release factor 1 [Neisseria mucosa C102]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|169633250|ref|YP_001706986.1| peptide chain release factor 1 [Acinetobacter baumannii SDF]
 gi|184158674|ref|YP_001847013.1| peptide chain release factor 1 [Acinetobacter baumannii ACICU]
 gi|239501457|ref|ZP_04660767.1| peptide chain release factor 1 [Acinetobacter baumannii AB900]
 gi|260554585|ref|ZP_05826806.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|332874369|ref|ZP_08442280.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
 gi|238685536|sp|A3M6N7|RF1_ACIBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688133|sp|B0VM26|RF1_ACIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690970|sp|B2HU82|RF1_ACIBC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169152042|emb|CAP00926.1| peptide chain release factor 1 [Acinetobacter baumannii]
 gi|183210268|gb|ACC57666.1| Protein chain release factor A [Acinetobacter baumannii ACICU]
 gi|193077723|gb|ABO12581.2| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
 gi|260411127|gb|EEX04424.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|322507515|gb|ADX02969.1| prfA [Acinetobacter baumannii 1656-2]
 gi|323518589|gb|ADX92970.1| peptide chain release factor 1 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737448|gb|EGJ68364.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
          Length = 362

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 168/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + +  E+E       +     DSN AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|167470509|ref|ZP_02335213.1| peptide chain release factor 2 [Yersinia pestis FV-1]
          Length = 248

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 154/247 (62%), Positives = 188/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D  + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
 gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKSKKEELED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   ++   +    +K E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLRETSDKEEVEMLKEESTALKNELPDMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG VV    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VVATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLDEIIDALTLSEQ 346


>gi|256419486|ref|YP_003120139.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
 gi|256034394|gb|ACU57938.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
          Length = 354

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 106/338 (31%), Positives = 178/338 (52%), Gaps = 8/338 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R   ++    +P +  +  +   L +E + L+  +         L DN+   +  L
Sbjct: 7   AIKGRFEQVSLALTNPEIVSDNKQFSKLSKEYRQLEKIVKVYDAYMKTL-DNIAFNKEVL 65

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           E  D  + +   +  + ++L  + ++    +LL      D  +A LE+  G GG E+  +
Sbjct: 66  ESGDEEMRELAKEETEALQLLKDEQEADIRNLLIPKDPQDEKNAMLEIRGGTGGDEASLF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY R+ E + + T  +    G   G K   + + G + YG LK E GVHR+ R+
Sbjct: 126 AGDLLRMYLRYCETKGWSTSIMNETPGAAGGYKEVVVEVTGDDVYGTLKFESGVHRVQRV 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ + P   + +++EI ++D ++DT+R+SGAGGQHVN T+SAVR+T
Sbjct: 186 PATETQGRVHTSAATVAILPEA-EEVDVEIRDADIKMDTFRSSGAGGQHVNKTESAVRLT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           HIP+GVVV+CQ+ RSQH N+  A  MLR+++YE  ++K EE       S    G    +I
Sbjct: 245 HIPSGVVVECQEGRSQHSNRDIAMKMLRSRIYEAAVRKHEEAIASQRKSLVSTGDRSAKI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +   +    ++GD+ + ++A 
Sbjct: 305 RTYNY-PQGRVTDHRIGMTMYNLDAFMNGDIQEMVQAL 341


>gi|313631914|gb|EFR99059.1| peptide chain release factor 1 [Listeria seeligeri FSL N1-067]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E     E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LSEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
 gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|313158318|gb|EFR57720.1| peptide chain release factor 1 [Alistipes sp. HGB5]
          Length = 361

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +      K  DP +  +V +   L +E + L+  I   +  +  L +     ++
Sbjct: 10  LDGLKLKYEETGQKLTDPEVIADVKQFVQLNKEYKELEPIIETSERYRTALANLAEAKDI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  + +     +  ++  +E  +       +     DS +A +E+  G GG E+ 
Sbjct: 70  LANDKDEEMREMARGEITELEPAIEQMEEQIKLLLIPKDPQDSKNAIMEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYT++ E + ++ E     DG   G K   L + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLLRMYTKYIESKGWRYEMTSFSDGAAGGYKEVVLKVTGQNVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EIS +D R D + ASG GGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEA-EEFDVEISMNDIRKDIFCASGPGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K  +EIA+  ++  +      
Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDEIASKRKTMVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 309 KIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDVIDHLIVAE 351


>gi|313636275|gb|EFS02086.1| peptide chain release factor 1 [Listeria seeligeri FSL S4-171]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E     E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LSEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVIDALI 343


>gi|253688500|ref|YP_003017690.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585241|sp|C6DHY1|RF1_PECCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|251755078|gb|ACT13154.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+  K  +E      Q   L     D    +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVV 345


>gi|82544335|ref|YP_408282.1| peptide chain release factor 1 [Shigella boydii Sb227]
 gi|187734065|ref|YP_001879994.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|119361607|sp|Q31ZQ4|RF1_SHIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691757|sp|B2TZV9|RF1_SHIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81245746|gb|ABB66454.1| peptide chain release factor RF-1 [Shigella boydii Sb227]
 gi|187431057|gb|ACD10331.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|320185614|gb|EFW60376.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83]
 gi|332094801|gb|EGI99845.1| peptide chain release factor 1 [Shigella boydii 3594-74]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L++ K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|325204648|gb|ADZ00102.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIA 346


>gi|315283708|ref|ZP_07871812.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
 gi|313612648|gb|EFR86686.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNEQINETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E     E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|260549389|ref|ZP_05823608.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
 gi|260407498|gb|EEX00972.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
          Length = 362

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 168/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + +  E+E       +     DSN AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|259908618|ref|YP_002648974.1| peptide chain release factor 1 [Erwinia pyrifoliae Ep1/96]
 gi|224964240|emb|CAX55747.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae Ep1/96]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L   D  + +   + LQ  +   +  Q +           D  + YLEV AG GG E+ 
Sbjct: 68  ML--GDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++  +    +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIEPIV 345


>gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254790877|sp|B8J4R4|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 356

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 172/340 (50%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L      P ++ +  + + L +    L + +   +  +    +      L
Sbjct: 5   LEGLEKKYLELEEALAQPDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAE-NRL 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L ++D  I     + + R + E+   + E     L S   D  +  LE+ AG GG E+ 
Sbjct: 64  LLHDEDPEIRAMAQEEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +K E +     E  G K    LI G   Y  LK E G HR+ 
Sbjct: 124 LFAADLFRMYTRYAELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI   D RID YRASGAGGQHVN T+SAVR
Sbjct: 184 RVPATEAQGRIHTSAATVAVMPEA-EEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PT  VV CQ ERSQHKNKA+A  +L +++   E +++  E++   ++         
Sbjct: 243 ITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQSSELSADRKAQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P     D R N+   S   +++G+L+  ++A 
Sbjct: 303 RIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELESLVEAL 341


>gi|308389808|gb|ADO32128.1| peptide chain release factor I [Neisseria meningitidis alpha710]
 gi|325130724|gb|EGC53462.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304]
 gi|325136665|gb|EGC59265.1| peptide chain release factor 1 [Neisseria meningitidis M0579]
 gi|325201657|gb|ADY97111.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149]
 gi|325208608|gb|ADZ04060.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIA 346


>gi|254674224|emb|CBA10008.1| peptide chain release factor 1 [Neisseria meningitidis alpha275]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 173/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++   Q   L     D  + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDTDDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|227328865|ref|ZP_03832889.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  +     + L+  K  +E      Q   L     D    +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEARRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPVV 345


>gi|254457086|ref|ZP_05070514.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
 gi|207085878|gb|EDZ63162.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
          Length = 355

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 179/339 (52%), Gaps = 15/339 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R + L+     P +  ++     L +E+  L   +   KE +  +       E+     D
Sbjct: 12  RYNELSELLSSPDITSDIKRMTALSKEQSSLLPIVEKAKEYKSIIKQIAETKEML---GD 68

Query: 82  CSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
             ++    + L+ ++ ++    E  +   L   + D  +  +E+ AGAGG E+  +   L
Sbjct: 69  PEMIDMAKEELKELEPQIPLIEESIKLLLLPKDQNDDRNIIVELRAGAGGDEAAIFVGDL 128

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
              YTR+AE + +K E L     +  G K    LIKG   Y  LK E G+HR+ R+   +
Sbjct: 129 FDAYTRYAEVKGWKVELLSTSPSDAGGFKEVIALIKGDQVYSRLKYEGGIHRVQRVPETE 188

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V P V D +E+ I+E+D +ID  R+SG GGQ VNTTDSAVRITH+PT
Sbjct: 189 SQGRVHTSAITVAVMPEV-DDVEVVINENDLKIDVMRSSGCGGQSVNTTDSAVRITHLPT 247

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRS 314
           G+VV  Q ++SQHKNK +A  +L+A+LY+LE+  +E  +   E+   ++G G    +IR+
Sbjct: 248 GLVVTNQDQKSQHKNKEKAMKVLKARLYDLEM--QEAQSKDSEARLAQVGSGDRSGRIRT 305

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           Y   P   + D R  +     +++++G  LD+ ++  + 
Sbjct: 306 YNY-PQNRMSDHRITLTLYRLNEIMNGGLLDEVIEPLIT 343


>gi|261409698|ref|YP_003245939.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
 gi|261286161|gb|ACX68132.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
          Length = 355

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++ +        E  +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKMDDEMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMPEA-EEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA++++  + ++EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFD--MMRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQ 347


>gi|34495535|ref|NP_899750.1| peptide chain release factor 1 [Chromobacterium violaceum ATCC
           12472]
 gi|46576724|sp|Q7P1Y2|RF1_CHRVO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34101390|gb|AAQ57759.1| peptide chain release factor I [Chromobacterium violaceum ATCC
           12472]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +          Q++   K L RE   L   +      +    D     ++
Sbjct: 9   LAQLADRLEEVTHLLASETATQDMEAFKKLTREHAELTPVVETFSAYRQCEGDIAAAEDM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     Q E ++   +++      Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LADPEMKEFAQAEIAEGKDKLEALDLELQKLLLPKDPNDDKNIFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +   + +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 129 ADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRLVGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+  E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+V +CQ  RSQH NKA A  +L A++Y+++L  RE+        K+ IG G    +
Sbjct: 249 IPTGIVAECQDGRSQHANKASAMQVLAARIYDIQL--REKNQKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+DGDL +   A +A ++
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKLDYVMDGDLAELTDALIAEQQ 349


>gi|238792551|ref|ZP_04636184.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
 gi|238728186|gb|EEQ19707.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +  + D+L   E+
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRS-VQDDLEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE  D  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  MLE--DLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|238026092|ref|YP_002910323.1| peptide chain release factor 1 [Burkholderia glumae BGR1]
 gi|237875286|gb|ACR27619.1| Peptide chain release factor 1 [Burkholderia glumae BGR1]
          Length = 360

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 182/343 (53%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D     EL
Sbjct: 9   LDQLSSRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEQYAQWRLARGDEAAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +     +E   Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMREFAEEEIREARERMARLEAELQTMLLPKDPNDDRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESGSDLGGYKEVIVRIAGHGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQ--YHEQHAREAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       ++DGDLD+ + A+LA +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELI-ASLASE 347


>gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
 gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
          Length = 360

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/340 (34%), Positives = 175/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++    D  +  +  + + L +E   LD  +   +  Q    D     E+
Sbjct: 9   LEQLRDRHEEVSAMLGDADVISDQNQFRDLSKEFSQLDEVVRVFEAYQRCQSDLSEAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     D L   + E+    E  Q   L     DS + YLE+ AG GG E+ 
Sbjct: 69  LKDS-DPEMQSMARDELDAGEPELAAMEEKLQLLLLPRDPRDSQNVYLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R++E R ++ E +    GE  G K     I+G + Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRIQGDDIYAHLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  D   +IEI+++D R+DT+R+SGAGGQHVNTTDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDTFRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL     Q+          +    G    
Sbjct: 248 ITHLPSGIVVECQDERSQHKNRARAMSLLQAKLASASEQQAAAEQAEERRNLVGTGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+      +V++GDLD  ++  
Sbjct: 308 RIRTYNF-PQGRVSDHRINLTLYKLDEVIEGDLDALIQPL 346


>gi|254850994|ref|ZP_05240344.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258620333|ref|ZP_05715371.1| peptide chain release factor 2 [Vibrio mimicus VM573]
 gi|258624704|ref|ZP_05719638.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|254846699|gb|EET25113.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258582991|gb|EEW07806.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|258587212|gb|EEW11923.1| peptide chain release factor 2 [Vibrio mimicus VM573]
          Length = 248

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 153/246 (62%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+K
Sbjct: 1   MFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +
Sbjct: 61  SATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|169795523|ref|YP_001713316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213158536|ref|YP_002319834.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|215483010|ref|YP_002325215.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332850713|ref|ZP_08432960.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332866986|ref|ZP_08437303.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
 gi|226739095|sp|B7H0L9|RF1_ACIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739096|sp|B7IBA1|RF1_ACIB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688120|sp|B0V7E0|RF1_ACIBY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169148450|emb|CAM86316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213057696|gb|ACJ42598.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|213989032|gb|ACJ59331.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332730550|gb|EGJ61866.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332734315|gb|EGJ65443.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
          Length = 362

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 168/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + +  E+E       +     DSN AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
 gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
          Length = 356

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 177/348 (50%), Gaps = 15/348 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           LFD  +   +R   L     DP +  N  E + L RE   L   +   +  +  + +   
Sbjct: 2   LFDKIEELERRYQELEALLSDPVVLGNQPEFRKLSREHFDLSALVQAYRNYKRIISEIEG 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL     D  + +     L+ ++ + +  +       L     D     LE+ AG GG
Sbjct: 62  NRELLA---DPEMKEMAEAELESLEKQRDALESEIKLLLLPKDPNDDKSVILEIRAGTGG 118

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE  +++ E +   + E+ G K     ++G   +  LK E G 
Sbjct: 119 DEAALFAGDLFRMYSRFAETNRWRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESGT 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ + P   + ++I+I+ +D +ID YR+SGAGGQHVNTTD
Sbjct: 179 HRVQRVPETEAQGRIHTSACTVAIMPEA-EDVDIDINPTDLKIDVYRSSGAGGQHVNTTD 237

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG VV CQ+ERSQ KN+A+A  +L+ ++  L+   +E+ A +    K ++G
Sbjct: 238 SAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRI--LDNILQEQNAKLAADRKQQVG 295

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   + D R  +       ++ GD+ +   A  A
Sbjct: 296 SGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIADALRA 342


>gi|33519726|ref|NP_878558.1| peptide chain release factor 2 [Candidatus Blochmannia floridanus]
 gi|33504071|emb|CAD83332.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           floridanus]
          Length = 365

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 149/344 (43%), Positives = 216/344 (62%), Gaps = 2/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD +   + L  +  K +   +W ++        +    +N    +  +   L D 
Sbjct: 17  LRIVFDCNVQKELLKKIIVKLKSVDIWSSLSHNMTADGQCNSFENIGELVNYMVKDLQDL 76

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+++ +  +D  ++ E  + L  I   +   +   + S + D  + Y+++ +G+GGTE
Sbjct: 77  SDLIKIVVH-NDSLLINEIQEQLIHIDRILFQLEMCQMFSKKYDDCNCYVDIQSGSGGTE 135

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY +W + + F  E +    G+ +GIKS T+ + GP  YGWL+ E G+HR
Sbjct: 136 AQDWANMLLRMYLKWIDNKGFNVEIVTESCGDFSGIKSTTIKVIGPYVYGWLRTESGIHR 195

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+D+  +RHTSF+S++VYP +DD+I+I+I   D RID YRASGAGGQHVN T+SA
Sbjct: 196 LVRKSPFDATGKRHTSFASVFVYPELDDNIDIQIRPEDLRIDVYRASGAGGQHVNRTESA 255

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPT +V QCQ +RSQHKNK QA   L+AKLY  EL K+     I E+ K +I WG
Sbjct: 256 VRITHIPTNIVTQCQSDRSQHKNKNQAIKQLKAKLYNFELHKKRIEKKIRENKKKDITWG 315

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL  +  +KDLRT +EK +   VL+GDLDDF+K ++ +
Sbjct: 316 NQIRSYVL-DHSRIKDLRTGLEKHNVKAVLNGDLDDFIKTSIKV 358


>gi|154174699|ref|YP_001407404.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
 gi|166223540|sp|A7GW12|RF1_CAMC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112802322|gb|EAT99666.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
          Length = 355

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 179/341 (52%), Gaps = 15/341 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + ++    DP++  ++ +   L +E+  ++   +   +    L D      L    
Sbjct: 10  LDRYNEISALLGDPNIINDIEKMTKLSKEQSSIEPIKNAASQYLQTLDDIEENKALL--- 66

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   + L+  ++  E  +       L     D  + +LE+ AG GG E+  +  
Sbjct: 67  DDAELGELAREELKSAQIRKEELENEIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFVG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L   Y R+A+ R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+  
Sbjct: 127 DLFNAYIRYADLRGYKFEIVSQSEGSAGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPE 186

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ + P V+DS EIEI+ +D RID  R+SG GGQ VNTTDSAVRITHI
Sbjct: 187 TESQGRVHTSAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHI 245

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QI 312
           PTG+VV  Q  +SQHKNK  A  +L+A+LYE++  + E IA      K+++G G    +I
Sbjct: 246 PTGLVVTNQDGKSQHKNKEAAMKVLKARLYEMQ--EAERIAKETSERKSQVGTGDRSGRI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           R+Y   P   + D R N+       ++ G L D+ ++  +A
Sbjct: 304 RTYNF-PQNRISDHRINLTLYRLDAIMAGGLFDEIIEPLIA 343


>gi|254382315|ref|ZP_04997675.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
 gi|194341220|gb|EDX22186.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
          Length = 359

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   ++  +  +    D     E 
Sbjct: 5   VEELIGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIETAKEF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +   + +   E  +   +    +D  D  LEV AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKELSAQREELTEKLRLLLVPRDPSDDKDVLLEVKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + ++          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVSVRTKGGNGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +E+EI+ +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEVEVEINMNDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKT 304
           TDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     +  E+  +++  S   
Sbjct: 242 TDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D RT  +  +   VLDGDLD  ++A +
Sbjct: 302 SVDRSEKIRTYNY-PENRISDHRTGFKAYNLDQVLDGDLDSIIQACV 347


>gi|313622330|gb|EFR92817.1| peptide chain release factor 1 [Listeria innocua FSL J1-023]
          Length = 358

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNINEQIDETREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E     E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|160878572|ref|YP_001557540.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
 gi|189039966|sp|A9KHD4|RF1_CLOPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160427238|gb|ABX40801.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
          Length = 358

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  +  +P +  +    + LM+E+  L   +    E +    +   
Sbjct: 1   MFDKLEDLLIRFQEIQNELNEPTVTNDQARFRKLMKEQNDLGEIVDKYLEYKQTKKNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  +    E  +   L     DS +  +E+  GAGG
Sbjct: 61  SLELLDEESDEEMRELAKEELSTSKANLVVIEEQLKILLLPKDPNDSKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE  ++K + + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAELFRMYSKYAETMRWKIDMMNLNENGIGGFKEVIFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P   + +++E++ +DCR D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRIPVTESGGRIHTSTVTVAIMPEA-EEVDVELNMNDCRFDVFRSSGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+TH+PTG+V+ CQ E+SQ KN+ +A  +LRA+LYELEL+K  +  A   +S     
Sbjct: 240 SAVRLTHMPTGIVISCQDEKSQLKNRDKALKVLRARLYELELEKAHDAEAAARKSQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P     D R  +      D+++GDL + + +  A  +
Sbjct: 300 DRSEKIRTYNF-PQGRCTDHRIKLTSHRLDDIMNGDLQEVIDSLTAADQ 347


>gi|310767482|gb|ADP12432.1| peptide chain release factor 1 [Erwinia sp. Ejp617]
          Length = 360

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     E+
Sbjct: 9   LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L   D  + +   + LQ  +   +  Q +           D  + YLEV AG GG E+ 
Sbjct: 68  ML--GDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++  +    +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIEPIV 345


>gi|240949505|ref|ZP_04753845.1| peptide chain release factor 2 [Actinobacillus minor NM305]
 gi|240296078|gb|EER46739.1| peptide chain release factor 2 [Actinobacillus minor NM305]
          Length = 248

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 146/247 (59%), Positives = 189/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
 gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
          Length = 364

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 111/341 (32%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +      P +  +  + + L RE   L   ++  ++ +    D   +  +
Sbjct: 9   LESLCERHQEVEQLLSQPEIIADQEKFRELNREYSRLQVMVNTFQDYKRAADDLEEMQAM 68

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE DD  +     + L+    +        Q   L   + D  + +LE+ AG GG E+ 
Sbjct: 69  -LEGDDEDMKAMAQEELEPTKEKAAALEHELQLLLLPHDDRDDCNCFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + ++ E +   +GE  G K     + G  AYG++K E G HR+ 
Sbjct: 128 LFAGELYRMYAKYCEAKGWQLEVVSQSEGEVGGYKEIIAKLSGEGAYGYMKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P +  S   E++ +D RIDT+RASGAGGQH+N TDSA+R
Sbjct: 188 RVPATEAQGRVHTSACTVMVLPEIPPSKAPEVNPADLRIDTFRASGAGGQHINKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV+CQ ERSQH+N+ +A  +L ++L ++E  KR         S    G    
Sbjct: 248 ITHIPTGIVVECQDERSQHRNRERAMEVLLSRLAKMEEDKRLAEQTEARHSILSSGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     S+VL+G+LD  +K  +
Sbjct: 308 RIRTYNF-PQSRVTDHRINLTLYRLSEVLEGNLDLILKPVI 347


>gi|289435805|ref|YP_003465677.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172049|emb|CBH28595.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 358

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E     E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LSEKLDDEMREMAKEEFTELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|148543687|ref|YP_001271057.1| peptide chain release factor 1 [Lactobacillus reuteri DSM 20016]
 gi|227363334|ref|ZP_03847463.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227544508|ref|ZP_03974557.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300909304|ref|ZP_07126765.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|325682058|ref|ZP_08161576.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
 gi|148530721|gb|ABQ82720.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           reuteri DSM 20016]
 gi|227071641|gb|EEI09935.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227185531|gb|EEI65602.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300893169|gb|EFK86528.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|324978702|gb|EGC15651.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
          Length = 362

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 14/356 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +      L +E   L   +    + +    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVH 122
            + D+  LL    ++D  ++ +E     +  + ++E K+ E LL      D  +  +E+ 
Sbjct: 62  TISDDEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIR 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK
Sbjct: 121 GAAGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQH
Sbjct: 181 FENGAHRVQRVPVTESAGRVHTSTATVGVMPEA-EDVDVDIDPKDIRVDVYRSSGAGGQH 239

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+    +++E +   +  
Sbjct: 240 VNKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY--YQQQEQSAYDQKR 297

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K  IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 298 KDAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 352


>gi|262369773|ref|ZP_06063101.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
 gi|262315841|gb|EEY96880.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
          Length = 362

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 165/340 (48%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLSDRHEELTALLADVEVISDNKRFRQLSREHSDLSEITEVWTKYKQAEADIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   +  E     + I   +E       +     D+N AYLE+ AG GG E+ 
Sbjct: 66  EAMLSDPDFKEMAVEEIKENKAIIASLEADLNILMIPKDPNDANSAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMYT++AE + ++ E L  ++GE  G K    L+ G   YG LK E G HR+ 
Sbjct: 126 IFSGDLYRMYTKYAESQGWRIEVLSENEGEHGGYKEIICLVNGEGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    +EI+ SD RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L            + +            
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLASRLESAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       V++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELLDSL 344


>gi|254229664|ref|ZP_04923074.1| Protein chain release factor B [Vibrio sp. Ex25]
 gi|151937785|gb|EDN56633.1| Protein chain release factor B [Vibrio sp. Ex25]
          Length = 248

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 153/246 (62%), Positives = 191/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I+I+I+ S
Sbjct: 61  SATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|42527989|ref|NP_973087.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
 gi|81570139|sp|Q73JU6|RF1_TREDE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41819034|gb|AAS13006.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
          Length = 361

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 186/347 (53%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN  +RL  +  + E+P+L ++V + K  MRE  +L   +                  L
Sbjct: 5   LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKLL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + L  ++   E  +       +     +  +  +E+  G GG E+ 
Sbjct: 65  IQEESDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE + +K E L +++ E  G K  T  I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   + + R HTS  ++ V P  +++ EIEI++ D RID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEET-EIEINQEDLRIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K++  A   ++ K+++G G  
Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQ--AERAQNRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
             +IR+Y   P   V D R N+       V+ G LD+ + A  +A +
Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDAVMQGSLDELIDALCIAAR 347


>gi|329929018|ref|ZP_08282820.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
 gi|328937007|gb|EGG33436.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
          Length = 355

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++ +        E  +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKMDDEMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMPEA-EEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA++++  + ++EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFD--MMRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQ 347


>gi|283478591|emb|CAY74507.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 363

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     E+
Sbjct: 12  LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATA-EM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L   D  + +   + LQ  +   +  Q +           D  + YLEV AG GG E+ 
Sbjct: 71  ML--GDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 129 IFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 189 RVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++  +    +    G    
Sbjct: 249 ITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQEESSTRRNLLGSGDRSD 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 309 RNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIEPIV 348


>gi|149280703|ref|ZP_01886814.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
 gi|149228568|gb|EDM33976.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
          Length = 380

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/340 (30%), Positives = 176/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +  +  +P   Q++     L +E + L   +   K  ++ + +     E+
Sbjct: 28  LEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKIYKNVMSNIEANKEI 87

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L  +  + E  +       +     D+ +A  E+  G GG E+ 
Sbjct: 88  LSNEKDAELREMAKEELDLLLKQQEEMEEKVRLMLIPVDPEDAKNAVFEIRGGTGGDEAA 147

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+ E++ +K E +++ +G   G K   L + G + YG LK E GVHR+ 
Sbjct: 148 LFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYESGVHRVQ 207

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   + I++ I+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 208 RVPDTETQGRVHTSAASVAVLPEA-EEIDLYINPADIDLQTSRSGGAGGQNVNKVETKVQ 266

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH P+G+VV CQQERSQ  N+  A  MLR+KLY++ELQK+  +IA   ++  +      
Sbjct: 267 LTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKNGDIAARRKTMVSTGDRSA 326

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R  +   + S V+DG + + + A 
Sbjct: 327 KIRTYNY-PQGRVTDHRIGLTLYNLSGVMDGGVQELIDAL 365


>gi|16801748|ref|NP_472016.1| peptide chain release factor 1 [Listeria innocua Clip11262]
 gi|116873908|ref|YP_850689.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|20139333|sp|Q927V0|RF1_LISIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123466615|sp|A0ALM8|RF1_LISW6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16415223|emb|CAC97913.1| prf1 [Listeria innocua Clip11262]
 gi|116742786|emb|CAK21910.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|313617102|gb|EFR89654.1| peptide chain release factor 1 [Listeria innocua FSL S4-378]
          Length = 358

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQIDETREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E     E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343


>gi|317499018|ref|ZP_07957299.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|291560728|emb|CBL39528.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SSC/2]
 gi|316893668|gb|EFV15869.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 357

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 187/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  +  V RL  +  +  DP +  N    + LM+E+  L   +   KE +     + D
Sbjct: 1   MFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L+LLE   +E+   + +E  +  +  ++   E  +   +     D  +  +E+ AGAGG
Sbjct: 61  SLMLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDKNIIVEMRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   + RMY  +AE +++K   L  ++    G K    ++ G  AY   K E GV
Sbjct: 121 DEAGLFVADVARMYRNYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P V + +E+EI  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEV-EDVEVEIDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LR++LYELE QK  +E A   +S     
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDEEAAKRKSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GDLD+ + +  A  +
Sbjct: 300 DRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAADQ 347


>gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           32953]
 gi|81639458|sp|Q66AX5|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP
           32953]
          Length = 360

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D++   E+
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSA-QDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  ML--DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     I G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKISGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGTGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121]
          Length = 358

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 188/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   ++   +    +K E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLNETSDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E+ + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     S +++G+LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQIMEGNLDEIIDALTLSEQ 346


>gi|332287121|ref|YP_004422022.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|325506910|gb|ADZ18548.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|328914361|gb|AEB55194.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
          Length = 294

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 144/273 (52%), Positives = 192/273 (70%), Gaps = 1/273 (0%)

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  + ++        +  +   + + LLSGE D N  +L ++AGAGGTES DW  ML RM
Sbjct: 16  DPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRM 75

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWA + ++K E ++  +G+ AGIK  T+   G  AYG+ K E+GVHRLVRISP+DSN+
Sbjct: 76  YCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAERGVHRLVRISPFDSNA 135

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG++
Sbjct: 136 KRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGIM 195

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           V CQ+ERSQ +N+     MLRA++Y+  LQ+R E   I   +K EI WG QIR+YV QPY
Sbjct: 196 VSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNKKEIAWGSQIRNYVFQPY 255

Query: 321 QMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 256 TLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 288


>gi|304383714|ref|ZP_07366173.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
 gi|304335238|gb|EFM01509.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
          Length = 374

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 120/358 (33%), Positives = 202/358 (56%), Gaps = 12/358 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   L    + D           +T+ P  W++   A+  M++ + +   +    E++
Sbjct: 11  QERAEALFRYLEIDKKQIEYEEEELRTQAPDFWEDTARAQEQMKKVKGIKRWLDGYAEVR 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +  +  +   +E      +E  D+ ++    +E  +  ++L  + D     L++++
Sbjct: 71  TLTDELQLAFDFYHDE--MVTEEEVEDDYRKAVKAIENLELMNMLRQKEDPMGCVLKINS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLK 182
           GAGGTESQDWA ML+RMY RWAE   ++     + +G+EAGIKS T+ I+ G  AYG+LK
Sbjct: 129 GAGGTESQDWAQMLMRMYVRWAEAHGYRCTISNLQEGDEAGIKSVTMEIEGGEYAYGYLK 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    D +R+ GAGGQ+
Sbjct: 189 SENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKVSWDLFRSGGAGGQN 248

Query: 243 VNTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR E
Sbjct: 249 VNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLE 308

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + T    V+DG +D+F+KA L 
Sbjct: 309 AQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMDGKIDEFIKAYLM 365


>gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 357

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 111/353 (31%), Positives = 187/353 (52%), Gaps = 9/353 (2%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDR 65
           +  +FD     V R   LN    DP +  +      L +E   L + +   +  KE+  +
Sbjct: 1   MDEIFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQ 60

Query: 66  LCDNLILLELALEEDD-CSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHA 123
           L D+  +L   +++ D  S++++   + +  K ++E   +   L     D  +  +E+H 
Sbjct: 61  LDDDEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHG 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK 
Sbjct: 121 AAGGDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKY 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+
Sbjct: 181 ENGAHRVQRVPVTESAGRVHTSTATVGVMPE-EEDVDIDIDPKDIRVDVYRSSGAGGQHI 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+ ++  N    S 
Sbjct: 240 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSA 299

Query: 304 TEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 300 IGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351


>gi|325474790|gb|EGC77976.1| peptide chain release factor 1 [Treponema denticola F0402]
          Length = 361

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 186/347 (53%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN  +RL  +  + E+P+L ++V + K  MRE  +L   +                  L
Sbjct: 5   LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKLL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + L  ++   E  +       +     +  +  +E+  G GG E+ 
Sbjct: 65  IQEESDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE + +K E L +++ E  G K  T  I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   + + R HTS  ++ V P  +++ EIEI++ D RID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEET-EIEINQEDLRIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K++  A   ++ K+++G G  
Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQ--AERAQNRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
             +IR+Y   P   V D R N+       V+ G LD+ + A  +A +
Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDSVMQGSLDELIDALCIAAR 347


>gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
 gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
          Length = 358

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   ++   +    +K E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLNETSDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     S +L+G+LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQILEGNLDEIIDALTLSEQ 346


>gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [Mycobacterium vanbaalenii PYR-1]
 gi|166223576|sp|A1TD66|RF1_MYCVP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119958111|gb|ABM15116.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 357

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 171/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  +  DP L  +   AK + R    +   +S   +++    D     EL
Sbjct: 8   IEAILAEYGELEQRLADPELHADPAAAKKVGRRFAQISPIVSTYHKLEAARGDLEAAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD S   E  +   ++    +            D++D  LEV +G GG ES  +A 
Sbjct: 68  AA--DDASFAAEVDELTTKVADLDDRLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L     +  G K ATL I G        +  LK E GVHR+
Sbjct: 126 DLARMYIRYAERHGWTVTMLGETTSDLGGYKDATLSIAGKGDSADGVWSRLKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  D+  +++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L E Q   + +    S    +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N +  +   VLDGDLD    A  A  K
Sbjct: 306 ERIRTYNY-PENRIADHRINYKSHNLDQVLDGDLDPLFDALAAADK 350


>gi|160940109|ref|ZP_02087454.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436689|gb|EDP14456.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
          Length = 358

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 184/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L     DP + Q+      LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDKLDDMLIHYEELMLMLGDPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   +  +E  + E     L     D  +  LE+ AGAGG
Sbjct: 61  SLALLEEESDEEMREMAKEELSDARKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+ +A+ +++K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYSNYADSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I  +DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEA-EEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+   A    S     
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347


>gi|313676496|ref|YP_004054492.1| bacterial peptide chain release factor 1 (brf-1) [Marivirga
           tractuosa DSM 4126]
 gi|312943194|gb|ADR22384.1| bacterial peptide chain release factor 1 (bRF-1) [Marivirga
           tractuosa DSM 4126]
          Length = 355

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 8/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   +      P    ++ +   L +E   L+  +         L D   
Sbjct: 1   MLDRLERMKERFQEVGQLMVQPDAMADMKKFTELSKEYADLEKVVEVYDAYTKVLDDIKQ 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
              +   E +    +      + +K E +  +   + +L      DS +A LE+ AG GG
Sbjct: 61  AKNILENEKEPEFREMAKMEWEELKPERDRLEEELKKMLIPKDPNDSKNAVLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L +MY R+ +K       L++  G   G K     + G NAYG LK E GV
Sbjct: 121 DEAAIFAGDLFKMYQRFCDKNGLNLTVLDLTFGTAGGYKEIISTVTGKNAYGTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P + D +E+EI  +D R DTY +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVAVLPEI-DDVEVEIDMNDVRKDTYCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV CQ ++SQ KN  +A  +LR++LYE+EL K+ E       S    G
Sbjct: 240 SAVRLTHEPTGLVVTCQDQKSQIKNFDKALRVLRSRLYEIELAKQNEEVGAQRRSIVRSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D R N    +  ++++G+++D ++     +
Sbjct: 300 DRSDKIRTYNY-PQGRVTDHRINYTVHNLPNIMNGEIEDLIENLQIAE 346


>gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16]
 gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16]
          Length = 356

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 178/344 (51%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N           + + + L RE   L        + +    D      L
Sbjct: 5   LDQLAERLDEVNALLAREDATAKIDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               DD  +    +D +   +  +E  +   + LL      D  +  LE+ AG GG ES 
Sbjct: 65  L---DDPEMKDFAADEIASARARLEGLEASLQRLLLPKDPNDDRNLLLEIRAGTGGEESA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE+++++ E +     +  G K   + I G  A+  LK E G HR+ 
Sbjct: 122 LFAGDLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQHVN TDSAVR
Sbjct: 182 RVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV+CQ +RSQH+NK +A  +L A++ +++   R   A    + +  IG G  
Sbjct: 242 LTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQ--TRAAQAKEASTRRNLIGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++DGD+D+ + A  +
Sbjct: 300 SDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSALAS 342


>gi|15606216|ref|NP_213594.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
 gi|6225940|sp|O67032|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
          Length = 362

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 185/344 (53%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   ++   L  +   P + Q+V + K L +E + L       +  +    +     EL
Sbjct: 10  LDKLQEKYRKLQEELSKPEVIQDVEKYKKLSKELKELQEINELYERYKKAQKELKEAKEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   + + R+  E++  +       +     D+ +  LE+ AGAGG E+ 
Sbjct: 70  LK-SSDKDLRELAEEEVNRLTEEMKKLEEELKVHLVPKDPNDTKNVILEIRAGAGGEEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++AE++ +K   L  +     G K    LI+G  AY  LK E GVHR+ 
Sbjct: 129 LFAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P VD++ +I+I   + +I+T+RASGAGGQ+VNTT++AVR
Sbjct: 189 RVPVTESSGRIHTSTATVAVLPEVDET-DIKIKPEELKIETFRASGAGGQYVNTTETAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           ITHIPTG+VVQCQ ERSQ +NK +A  +L AKL +  E +K+EEIA   +          
Sbjct: 248 ITHIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKKQEEIAKERKEQVGTGERSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N+      DVL+G LD+ + A  A +
Sbjct: 308 KIRTYNF-PQNRVTDHRINLTLYKLQDVLEGKLDEIIDALRAKE 350


>gi|288942095|ref|YP_003444335.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
 gi|288897467|gb|ADC63303.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
          Length = 359

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 181/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P    +    + L RE   L   +   +  +D   D     EL
Sbjct: 9   LERIAERFGEVMALLAEPETQSDQGRFRDLSREYAQLQPLMECYERYRDAERDLAAAEEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D ++  +  ++  +   ++LL      D  +A+LE+ AG GG E+ 
Sbjct: 69  LT---DPEMAALARDEIEAARERLDVLEPELQTLLIPPDPNDQCNAFLEIRAGTGGAEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY R+AE   ++TE +   +GE  G K   + + G   Y  LK E G HR+ 
Sbjct: 126 LFAGDLMRMYMRYAELLGWRTEQVSASEGELGGYKEVVIRVSGSGVYSRLKFEPGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  +    IEI+ +D RIDTYR+SGAGGQHVN TDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVLPEAESIDAIEINSNDLRIDTYRSSGAGGQHVNKTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV+CQ+ERSQHKN+A+A ++L AKL  L   +  + +   ES K ++G G  
Sbjct: 246 ITHLPSGIVVECQEERSQHKNRAKAMSLLHAKL--LAGARETQASEQSESRKLQVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+      +V+ G LD  ++  LA
Sbjct: 304 SERIRTYNF-PQNRLTDHRINLTLYKLDEVMTGQLDQVIEPLLA 346


>gi|147567|gb|AAA24519.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTT SA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTGSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|329121081|ref|ZP_08249712.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
 gi|327471243|gb|EGF16697.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
          Length = 359

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L  K  DP + +N  + +   +E   L   ++  ++ +  +      LE+
Sbjct: 6   LQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVVETQNAALEI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +++   + +   ++L+  + E+E  + +     +     DS +  LE+ AG GG E+ 
Sbjct: 66  LNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LL+MY ++AE RK+K   +++++ +  G +     I G NAY  LK E GVHR+ 
Sbjct: 126 LFVADLLKMYLKFAEHRKWKCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S+ R HTS  ++ V P   + ++IEIS+ D R+D YRASGAGGQH+N T SA+R
Sbjct: 186 RIPETESSGRVHTSAVTVAVLPEA-EDVDIEISKEDIRVDVYRASGAGGQHINKTSSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG+VV CQ ER Q +N+ +A  +L+A+LY+  L+K + E A   +          
Sbjct: 245 ITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRKTKSETAQNRKEQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R  +        ++G ++  +   +
Sbjct: 305 RIRTYNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLI 344


>gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
 gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
          Length = 361

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 120/360 (33%), Positives = 183/360 (50%), Gaps = 17/360 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ ++L  +               +  K  DP +  NV E  +L ++   L   +   +
Sbjct: 4   VQIQKRLAEIEQA---------YREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQ 54

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSND 116
           E +           L  + +D  + +   +        +E  + E     L     D  D
Sbjct: 55  EYRQVEAGLAEAKSL-EDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKD 113

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+ AG GG E+  +A  L RMY+R+ E+  +++E +E ++ E  G K     +KG  
Sbjct: 114 VIVEIRAGTGGDEASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAG 173

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E GVHR+ R+   +++ R HTS +++ V P   + +EIEI   D  IDTYR+S
Sbjct: 174 AYSKLKFESGVHRVQRVPATEASGRIHTSAATVAVMPQA-EDVEIEIRPEDLDIDTYRSS 232

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EI 295
           GAGGQHVN TDSAVRITH PTG+VV CQ ERSQ KN+A+A  +LRA+LY+LELQK++ E 
Sbjct: 233 GAGGQHVNMTDSAVRITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSEE 292

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           A+             +IR+Y   P   V D R  +       +LDGD+ + + A     +
Sbjct: 293 ASTRRGMIGSGDRSERIRTYNF-PQNRVTDHRIGLTLYKLDYMLDGDIYEMIDALTMADQ 351


>gi|85059854|ref|YP_455556.1| peptide chain release factor 1 [Sodalis glossinidius str.
           'morsitans']
 gi|119361611|sp|Q2NRS4|RF1_SODGM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84780374|dbj|BAE75151.1| peptide chain release factor RF-1 [Sodalis glossinidius str.
           'morsitans']
          Length = 360

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 172/335 (51%), Gaps = 3/335 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  + I  + L +E   L +     +       D      L
Sbjct: 9   LEALQERREEVEVLLGDPGVISDQIRFRALSKEYAQLSDVTRCFQHWWQVQEDIHTAEHL 68

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E   +   ++   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LQDPEMRDMAQEELLASGASLEQLEQQLQVLLLPRDPDDERGCFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +    GE  G K     +    AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWKVEIVSASYGEHGGFKEVIAKVSHEGAYGLLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV+CQ ERSQHKNKA+A  +L A+L   E+Q+R++  +    +    G    +IR
Sbjct: 249 LPTGLVVECQDERSQHKNKAKALAVLGARLRAAEVQRRQQEESSTRRNLLGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +Y   P   V D R  +      +V++G LD  ++
Sbjct: 309 TYNF-PQGRVTDHRIGLTLYRLDEVIEGKLDMLIQ 342


>gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|61214645|sp|Q748B1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
          Length = 355

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 180/339 (53%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L +   DP +  N  E + L RE   L   I   +  +  L +     EL
Sbjct: 5   IEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEGNREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   + L++ + E+E   +   L     D  +  LE+ AG GG ES  +A
Sbjct: 65  LADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+ ++K E +   + E  G K    LI+G   +  LK E G HR+ R+ 
Sbjct: 125 GDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P   + IE++I+ +D +ID YRASGAGGQHVN T+SAVRITH
Sbjct: 185 ETEAQGRIHTSACTVAVLPEA-EDIEVDINPADLKIDVYRASGAGGQHVNKTESAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQ KN+A+A  +L+ K+  L+   +E+ A I    K ++G G    +
Sbjct: 244 IPTGIVVECQDERSQIKNRAKAMKVLKTKI--LDGLHQEQNARIAADRKQQVGSGDRSER 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  +       +++GD+ + + A 
Sbjct: 302 IRTYNF-PQGRMTDHRIGLTLYRLDSLMEGDIAEVVDAL 339


>gi|218689158|ref|YP_002397370.1| peptide chain release factor 1 [Escherichia coli ED1a]
 gi|254790882|sp|B7MTZ5|RF1_ECO81 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218426722|emb|CAR07559.1| peptide chain release factor RF-1 [Escherichia coli ED1a]
          Length = 360

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYCLDEVMEGKLDMLIEPII 345


>gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM 10]
 gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua]
 gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516]
 gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F]
 gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|20139332|sp|Q8ZEX8|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361639|sp|Q1C854|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361640|sp|Q1CJK1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223619|sp|A4TJN7|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977371|sp|A7FIG1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687250|sp|A9QZ08|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688460|sp|B1JM85|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691366|sp|B2K2Z0|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM 10]
 gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Nepal516]
 gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Antiqua]
 gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Pestoides F]
 gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004]
 gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038]
 gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 360

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D++   E+
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSA-QDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  ML--DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     I G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGTGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
 gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
          Length = 358

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREVQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|302554164|ref|ZP_07306506.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
 gi|302471782|gb|EFL34875.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
          Length = 358

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 173/347 (49%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V   + L  K  DP +  +   A+ L +    L   ++  +       D     EL
Sbjct: 5   VAELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWTQTGDDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  D  Q+ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKDLEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + I++EI+ +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEIDVEINPNDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+  
Sbjct: 242 TDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDL   ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLGAVIQACV 347


>gi|256023112|ref|ZP_05436977.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B]
          Length = 360

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 176/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + R+Y   P   V D R N+      +V++G LD  ++  + 
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIR 346


>gi|207744458|ref|YP_002260850.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
 gi|206595864|emb|CAQ62791.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
          Length = 356

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDVATAQEL 64

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  + E      R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGDLD+ +    A
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAA 342


>gi|261379805|ref|ZP_05984378.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
 gi|284797490|gb|EFC52837.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
          Length = 358

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAALLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL++   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 346


>gi|328952115|ref|YP_004369449.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
 gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
          Length = 357

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L  +  +P   +N    +   RE   L   I   ++ Q    +      L
Sbjct: 6   LHAIENRYLELEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECDNNQAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  I +   + +Q++K  +E+ +    F  L     D+ +  LE+ AG GG E+ 
Sbjct: 66  LKTETDEEIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE+  +K E L  +     G+K    LI G   Y  LK E GVHR+ 
Sbjct: 126 LFAAELFRMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + ++++IS  + RID +R+SG GGQ VNTTDSAVR
Sbjct: 186 RVPTTESQGRIHTSAVTVAILPEA-EDVDVQISPEELRIDVFRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNKA+A  +L+A+L +++  ++E+   + +  K+++G G  
Sbjct: 245 ITHLPTGMVVTCQDEKSQHKNKAKALKVLQARLLDIK--QQEQHQKMAQDRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +        L+G LD+ + A ++  +
Sbjct: 303 SERIRTYNF-PQGRVTDHRLGLTLYRLEAFLEGGLDELLDALVSYYR 348


>gi|302521935|ref|ZP_07274277.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|318060718|ref|ZP_07979441.1| peptide chain release factor 1 [Streptomyces sp. SA3_actG]
 gi|318075509|ref|ZP_07982841.1| peptide chain release factor 1 [Streptomyces sp. SA3_actF]
 gi|333024405|ref|ZP_08452469.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
 gi|302430830|gb|EFL02646.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|332744257|gb|EGJ74698.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
          Length = 357

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 175/346 (50%), Gaps = 14/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 5   VEELIGEHAELEQKLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIATAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E  +  +R +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AAE--DPEFAAEVKELDERREELTEKLRLLLVPRDPSDEKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK---------GPNAYGWLKGEQG 186
            LLRMY R+AE+  +KTE L+  + E  G K   + +K         G   +  +K E G
Sbjct: 123 DLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWARMKYEGG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VNTT
Sbjct: 183 VHRVQRVPSTESQGRIHTSAAGVLVTPEA-EEVDVEINPNDLRIDVYRSSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305
           DSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+   
Sbjct: 242 DSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRSQVRT 301

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 VDRSEKIRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDAVIQACV 346


>gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 361

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 182/344 (52%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   +  +   P + Q+V   + L RE + L       +E +    +     EL
Sbjct: 10  LEKLTEKYKRIEEELSKPEVIQDVKRYRELSREHKELAELYETYQEYKRLQRELNEAKEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                +  + +   + ++ I+  +    E  +   +     DS +  LE+ AG GG E+ 
Sbjct: 70  LK-SPEKELKELAQEEIEDIQSRIPELEEKLKLLLVPKDPNDSKNVILEIRAGTGGEEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LLRMY ++AE + +K   L  +     G K    LI+G  AY  LK E GVHR+ 
Sbjct: 129 LFVADLLRMYQKYAEDKGWKFSILNANKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P  D++ ++EI+  D +I+T+RASGAGGQ+VNTT++AVR
Sbjct: 189 RIPVTESGGRIHTSTATVAVLPEADEA-DVEINPQDLKIETFRASGAGGQYVNTTETAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           ITH PTG+VV CQ ERSQ +NK +A  +L AKL +  E +KREEIA   +          
Sbjct: 248 ITHTPTGIVVSCQDERSQFQNKQKALKILYAKLKDFYERKKREEIARERKEQVGTGERSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N+     +DVL+G LD+F+ A  A +
Sbjct: 308 KIRTYNF-PQNRVTDHRVNLTLYKLNDVLEGKLDEFIDALRAKE 350


>gi|293395774|ref|ZP_06640056.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
 gi|291421711|gb|EFE94958.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
          Length = 361

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      E +  + D++   E+
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSRCFLEWRQ-VQDDVATAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L++ +   E  + +           D    +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEELKQARETTETLEQQLQLLLLPKDPDDERSCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|15830970|ref|NP_309743.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|16129174|ref|NP_415729.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24112610|ref|NP_707120.1| peptide chain release factor 1 [Shigella flexneri 2a str. 301]
 gi|26247534|ref|NP_753574.1| peptide chain release factor 1 [Escherichia coli CFT073]
 gi|30062735|ref|NP_836906.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|74312449|ref|YP_310868.1| peptide chain release factor 1 [Shigella sonnei Ss046]
 gi|82776551|ref|YP_402900.1| peptide chain release factor 1 [Shigella dysenteriae Sd197]
 gi|89108056|ref|AP_001836.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. W3110]
 gi|91210432|ref|YP_540418.1| peptide chain release factor 1 [Escherichia coli UTI89]
 gi|110641441|ref|YP_669171.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110805216|ref|YP_688736.1| peptide chain release factor 1 [Shigella flexneri 5 str. 8401]
 gi|117623429|ref|YP_852342.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157158410|ref|YP_001462464.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|157160716|ref|YP_001458034.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|168750771|ref|ZP_02775793.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758136|ref|ZP_02783143.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764382|ref|ZP_02789389.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771100|ref|ZP_02796107.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776896|ref|ZP_02801903.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|168782567|ref|ZP_02807574.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|168787715|ref|ZP_02812722.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|168801524|ref|ZP_02826531.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|170020422|ref|YP_001725376.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|170080839|ref|YP_001730159.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682630|ref|YP_001743983.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|188494282|ref|ZP_03001552.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|191170894|ref|ZP_03032445.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|193064852|ref|ZP_03045929.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|193069953|ref|ZP_03050901.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194426002|ref|ZP_03058558.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194434263|ref|ZP_03066529.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194437123|ref|ZP_03069222.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|195939099|ref|ZP_03084481.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807446|ref|ZP_03249783.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816069|ref|ZP_03257248.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822717|ref|ZP_03263036.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398404|ref|YP_002270145.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209918452|ref|YP_002292536.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217328218|ref|ZP_03444300.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218549098|ref|YP_002382889.1| peptide chain release factor 1 [Escherichia fergusonii ATCC 35469]
 gi|218553765|ref|YP_002386678.1| peptide chain release factor 1 [Escherichia coli IAI1]
 gi|218558140|ref|YP_002391053.1| peptide chain release factor 1 [Escherichia coli S88]
 gi|218694725|ref|YP_002402392.1| peptide chain release factor 1 [Escherichia coli 55989]
 gi|218699918|ref|YP_002407547.1| peptide chain release factor 1 [Escherichia coli IAI39]
 gi|218704733|ref|YP_002412252.1| peptide chain release factor 1 [Escherichia coli UMN026]
 gi|227886367|ref|ZP_04004172.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|237705173|ref|ZP_04535654.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|238900442|ref|YP_002926238.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|253773790|ref|YP_003036621.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161293|ref|YP_003044401.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|254792681|ref|YP_003077518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018539|ref|ZP_05432404.1| peptide chain release factor 1 [Shigella sp. D9]
 gi|260843503|ref|YP_003221281.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|260854872|ref|YP_003228763.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|260867616|ref|YP_003234018.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|261224943|ref|ZP_05939224.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257200|ref|ZP_05949733.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291282236|ref|YP_003499054.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404754|ref|ZP_06648746.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|293409598|ref|ZP_06653174.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|293414488|ref|ZP_06657137.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|293433527|ref|ZP_06661955.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|298380397|ref|ZP_06989996.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300816902|ref|ZP_07097122.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300821019|ref|ZP_07101168.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300896599|ref|ZP_07115118.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300906882|ref|ZP_07124556.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300921823|ref|ZP_07137980.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300928243|ref|ZP_07143780.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300939553|ref|ZP_07154210.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300951678|ref|ZP_07165502.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300955611|ref|ZP_07167968.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300971920|ref|ZP_07171708.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300995966|ref|ZP_07181328.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|301017243|ref|ZP_07182024.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|301046860|ref|ZP_07193977.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|301305581|ref|ZP_07211672.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|301327073|ref|ZP_07220355.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301648136|ref|ZP_07247889.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|306813891|ref|ZP_07448064.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|307137826|ref|ZP_07497182.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|307310034|ref|ZP_07589684.1| peptide chain release factor 1 [Escherichia coli W]
 gi|309789161|ref|ZP_07683754.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309794302|ref|ZP_07688726.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|312971398|ref|ZP_07785573.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|331641741|ref|ZP_08342876.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331646529|ref|ZP_08347632.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331662614|ref|ZP_08363537.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331667595|ref|ZP_08368459.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331676991|ref|ZP_08377687.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331682700|ref|ZP_08383319.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332279599|ref|ZP_08392012.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|67471891|sp|P0A7I0|RF1_ECOLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471892|sp|P0A7I1|RF1_ECOL6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471893|sp|P0A7I2|RF1_ECO57 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471894|sp|P0A7I3|RF1_SHIFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361536|sp|Q0TIF9|RF1_ECOL5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361537|sp|Q1RCM7|RF1_ECOUT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361608|sp|Q32GZ6|RF1_SHIDS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361609|sp|Q3Z0S9|RF1_SHISS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122957490|sp|Q0T5I4|RF1_SHIF8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223555|sp|A1AAD8|RF1_ECOK1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977361|sp|A7ZKY5|RF1_ECO24 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977362|sp|A7ZZE7|RF1_ECOHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039971|sp|B1IU82|RF1_ECOLC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739104|sp|B7MKB3|RF1_ECO45 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739105|sp|B7NUX7|RF1_ECO7I RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739106|sp|B7LXC6|RF1_ECO8A RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739107|sp|B7N422|RF1_ECOLU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739108|sp|B1LH89|RF1_ECOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739109|sp|B7LSH9|RF1_ESCF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576656|sp|B1XAQ2|RF1_ECODH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058712|sp|B5YXM9|RF1_ECO5E RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058713|sp|B6I9S6|RF1_ECOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790881|sp|B7LGX2|RF1_ECO55 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585238|sp|C4ZTQ2|RF1_ECOBW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26107935|gb|AAN80134.1|AE016759_408 Peptide chain release factor 1 [Escherichia coli CFT073]
 gi|1651601|dbj|BAA36069.1| peptide chain release factor RF-1 [Escherichia coli str. K12
           substr. W3110]
 gi|1787462|gb|AAC74295.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13361181|dbj|BAB35139.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24051515|gb|AAN42827.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 301]
 gi|30040983|gb|AAP16713.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 2457T]
 gi|73855926|gb|AAZ88633.1| peptide chain release factor RF-1 [Shigella sonnei Ss046]
 gi|81240699|gb|ABB61409.1| peptide chain release factor RF-1 [Shigella dysenteriae Sd197]
 gi|91072006|gb|ABE06887.1| peptide chain release factor RF-1 [Escherichia coli UTI89]
 gi|110343033|gb|ABG69270.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110614764|gb|ABF03431.1| peptide chain release factor RF-1 [Shigella flexneri 5 str. 8401]
 gi|115512553|gb|ABJ00628.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157066396|gb|ABV05651.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|157080440|gb|ABV20148.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|169755350|gb|ACA78049.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|169888674|gb|ACB02381.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520348|gb|ACB18526.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|187767792|gb|EDU31636.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015105|gb|EDU53227.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|188489481|gb|EDU64584.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|188999995|gb|EDU68981.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354981|gb|EDU73400.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|189360046|gb|EDU78465.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365613|gb|EDU84029.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|189372547|gb|EDU90963.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|189376326|gb|EDU94742.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|190908626|gb|EDV68214.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|192927537|gb|EDV82154.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|192956706|gb|EDV87161.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194416057|gb|EDX32323.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194417494|gb|EDX33597.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194424106|gb|EDX40094.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|208727247|gb|EDZ76848.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732717|gb|EDZ81405.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738202|gb|EDZ85885.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159804|gb|ACI37237.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209772528|gb|ACI84576.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772530|gb|ACI84577.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772532|gb|ACI84578.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772534|gb|ACI84579.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772536|gb|ACI84580.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209911711|dbj|BAG76785.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217318645|gb|EEC27071.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218351457|emb|CAU97165.1| peptide chain release factor RF-1 [Escherichia coli 55989]
 gi|218356639|emb|CAQ89265.1| peptide chain release factor RF-1 [Escherichia fergusonii ATCC
           35469]
 gi|218360533|emb|CAQ98091.1| peptide chain release factor RF-1 [Escherichia coli IAI1]
 gi|218364909|emb|CAR02605.1| peptide chain release factor RF-1 [Escherichia coli S88]
 gi|218369904|emb|CAR17679.1| peptide chain release factor RF-1 [Escherichia coli IAI39]
 gi|218431830|emb|CAR12715.1| peptide chain release factor RF-1 [Escherichia coli UMN026]
 gi|222033010|emb|CAP75750.1| Peptide chain release factor 1 [Escherichia coli LF82]
 gi|226899930|gb|EEH86189.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|227836571|gb|EEJ47037.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|238861984|gb|ACR63982.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|242376990|emb|CAQ31713.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)]
 gi|253324834|gb|ACT29436.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973194|gb|ACT38865.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|253977408|gb|ACT43078.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)]
 gi|254592081|gb|ACT71442.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257753521|dbj|BAI25023.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|257758650|dbj|BAI30147.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|257763972|dbj|BAI35467.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|260449654|gb|ACX40076.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|281178397|dbj|BAI54727.1| peptide chain release factor 1 [Escherichia coli SE15]
 gi|281600635|gb|ADA73619.1| Peptide chain release factor 1 [Shigella flexneri 2002017]
 gi|284921023|emb|CBG34088.1| peptide chain release factor 1 [Escherichia coli 042]
 gi|290762109|gb|ADD56070.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324346|gb|EFE63768.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|291426962|gb|EFE99988.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|291434546|gb|EFF07519.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|291470066|gb|EFF12550.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|294493866|gb|ADE92622.1| peptide chain release factor 1 [Escherichia coli IHE3034]
 gi|298277839|gb|EFI19353.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300301228|gb|EFJ57613.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|300304663|gb|EFJ59183.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|300317504|gb|EFJ67288.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300359542|gb|EFJ75412.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300400374|gb|EFJ83912.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|300401315|gb|EFJ84853.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300411045|gb|EFJ94583.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300421749|gb|EFK05060.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300449124|gb|EFK12744.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300455557|gb|EFK19050.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300463712|gb|EFK27205.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300526318|gb|EFK47387.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300530676|gb|EFK51738.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300839170|gb|EFK66930.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|300846326|gb|EFK74086.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301073722|gb|EFK88528.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|305852528|gb|EFM52976.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|306909752|gb|EFN40246.1| peptide chain release factor 1 [Escherichia coli W]
 gi|307553266|gb|ADN46041.1| peptide chain release factor 1 [Escherichia coli ABU 83972]
 gi|307627266|gb|ADN71570.1| peptide chain release factor 1 [Escherichia coli UM146]
 gi|308122207|gb|EFO59469.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|308922915|gb|EFP68429.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309701510|emb|CBJ00817.1| peptide chain release factor 1 [Escherichia coli ETEC H10407]
 gi|310335995|gb|EFQ01195.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|312945841|gb|ADR26668.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313649400|gb|EFS13831.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|315060462|gb|ADT74789.1| peptide chain release factor RF-1 [Escherichia coli W]
 gi|315135847|dbj|BAJ43006.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|315288568|gb|EFU47966.1| peptide chain release factor 1 [Escherichia coli MS 110-3]
 gi|315290789|gb|EFU50161.1| peptide chain release factor 1 [Escherichia coli MS 153-1]
 gi|315297345|gb|EFU56625.1| peptide chain release factor 1 [Escherichia coli MS 16-3]
 gi|315615947|gb|EFU96573.1| peptide chain release factor 1 [Escherichia coli 3431]
 gi|320181782|gb|EFW56692.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905]
 gi|320188003|gb|EFW62670.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195779|gb|EFW70404.1| Peptide chain release factor 1 [Escherichia coli WV_060327]
 gi|320199250|gb|EFW73841.1| Peptide chain release factor 1 [Escherichia coli EC4100B]
 gi|320637363|gb|EFX07170.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           G5101]
 gi|320643225|gb|EFX12426.1| peptide chain release factor 1 [Escherichia coli O157:H- str.
           493-89]
 gi|320648162|gb|EFX16838.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H
           2687]
 gi|320653996|gb|EFX22070.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659475|gb|EFX27044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664612|gb|EFX31763.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153190|gb|EFZ39452.1| peptide chain release factor 1 [Escherichia coli EPECa14]
 gi|323162264|gb|EFZ48122.1| peptide chain release factor 1 [Escherichia coli E128010]
 gi|323168381|gb|EFZ54062.1| peptide chain release factor 1 [Shigella sonnei 53G]
 gi|323179274|gb|EFZ64844.1| peptide chain release factor 1 [Escherichia coli 1180]
 gi|323185627|gb|EFZ70988.1| peptide chain release factor 1 [Escherichia coli 1357]
 gi|323378974|gb|ADX51242.1| peptide chain release factor 1 [Escherichia coli KO11]
 gi|323937932|gb|EGB34196.1| peptide chain release 1 [Escherichia coli E1520]
 gi|323942490|gb|EGB38658.1| peptide chain release [Escherichia coli E482]
 gi|323947506|gb|EGB43510.1| peptide chain release 1 [Escherichia coli H120]
 gi|323949672|gb|EGB45558.1| peptide chain release [Escherichia coli H252]
 gi|323953934|gb|EGB49733.1| peptide chain release [Escherichia coli H263]
 gi|323962789|gb|EGB58367.1| peptide chain release [Escherichia coli H489]
 gi|323973391|gb|EGB68578.1| peptide chain release [Escherichia coli TA007]
 gi|323977218|gb|EGB72305.1| peptide chain release [Escherichia coli TW10509]
 gi|324006000|gb|EGB75219.1| peptide chain release factor 1 [Escherichia coli MS 57-2]
 gi|324015639|gb|EGB84858.1| peptide chain release factor 1 [Escherichia coli MS 60-1]
 gi|324017539|gb|EGB86758.1| peptide chain release factor 1 [Escherichia coli MS 117-3]
 gi|324117241|gb|EGC11148.1| peptide chain release [Escherichia coli E1167]
 gi|325497513|gb|EGC95372.1| peptide chain release factor 1 [Escherichia fergusonii ECD227]
 gi|326342759|gb|EGD66529.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044]
 gi|326346388|gb|EGD70125.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125]
 gi|330911076|gb|EGH39586.1| peptide chain release factor 1 [Escherichia coli AA86]
 gi|331038539|gb|EGI10759.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331045281|gb|EGI17408.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331061036|gb|EGI33000.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331065180|gb|EGI37075.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331075680|gb|EGI46978.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331080331|gb|EGI51510.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332092251|gb|EGI97328.1| peptide chain release factor 1 [Shigella boydii 5216-82]
 gi|332098194|gb|EGJ03167.1| peptide chain release factor 1 [Shigella dysenteriae 155-74]
 gi|332101951|gb|EGJ05297.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|332757864|gb|EGJ88191.1| peptide chain release factor 1 [Shigella flexneri 4343-70]
 gi|332759429|gb|EGJ89737.1| peptide chain release factor 1 [Shigella flexneri 2747-71]
 gi|332760305|gb|EGJ90595.1| peptide chain release factor 1 [Shigella flexneri K-671]
 gi|332767445|gb|EGJ97639.1| peptide chain release factor 1 [Shigella flexneri 2930-71]
 gi|333005050|gb|EGK24570.1| peptide chain release factor 1 [Shigella flexneri VA-6]
 gi|333005356|gb|EGK24874.1| peptide chain release factor 1 [Shigella flexneri K-218]
 gi|333007544|gb|EGK27022.1| peptide chain release factor 1 [Shigella flexneri K-272]
 gi|333019207|gb|EGK38494.1| peptide chain release factor 1 [Shigella flexneri K-304]
 gi|333019924|gb|EGK39196.1| peptide chain release factor 1 [Shigella flexneri K-227]
          Length = 360

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|51246578|ref|YP_066462.1| peptide chain release factor 1 [Desulfotalea psychrophila LSv54]
 gi|61214607|sp|Q6AJM5|RF1_DESPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50877615|emb|CAG37455.1| probable peptide chain release factor 1 (RF-1) [Desulfotalea
           psychrophila LSv54]
          Length = 357

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 183/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           LFD +D+   R+  L  K  DP +  +  E + ++RE  HL    +  KE +    D   
Sbjct: 2   LFDKFDDLDNRIEHLEGKLSDPEIVNDQKEFQKVVREHAHLSKLNTVYKEYKTACQDVED 61

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAG 126
              +  ++ +D  + +     L+ + + +       +   L     D  + +LE+ AGAG
Sbjct: 62  NKAILHDDGEDPDLKELAKAELEELNVRIVELDKAIKIILLPKDPNDEKNTFLEIRAGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L RMYTR+AE   +K E +  +     G K    LI G   +  LK E G
Sbjct: 122 GDEAALFVADLFRMYTRFAETMGWKVEVMSSNPLGIGGFKEIIALISGEQVFSKLKYESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ + P   + +E+ I  ++ + D +R+SG GGQ VNTT
Sbjct: 182 VHRVQRVPETETQGRIHTSAVTVAILPEA-EEVELHIDMNELKFDVFRSSGPGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ E+SQHKNK +A  +LRA+L  L+  + E  A I E+ ++++
Sbjct: 241 DSAVRITHLPTGLVVICQDEKSQHKNKVKALTVLRARL--LDKLESEHNAKISEARRSQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R N+       ++ G LD+ +   +   +
Sbjct: 299 GTGDRSERIRTYNF-PQGRVTDHRINLTLYKLETIMGGSLDEVIYPLITHDQ 349


>gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
 gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
          Length = 356

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L      P ++ +    + L +    L   +   +  +    +     +L
Sbjct: 5   LEGLEKKYMELEEALAQPDVFNDQEHYRKLTKAHADLREIVDLFRRHRALQQEMAENKQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  I     + ++R + E+    +  +   L +   D  +  LE+ AG GG E+ 
Sbjct: 65  LHDE-DPDIRDMAHEEIRRAESELPRIEQALKVALLPTDPLDEKNTILEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +K E +     E  G K    LI G   Y  LK E G HR+ 
Sbjct: 124 LFAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLIAGDRVYSRLKFEAGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI   D RID YRASGAGGQHVN T+SAVR
Sbjct: 184 RVPATETQGRIHTSAATVAVMPEA-EEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PT  VV CQ ERSQHKNKA+A  +L +++   E +++  E++   ++         
Sbjct: 243 ITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSADRKAQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P     D R N+   S   +++G+L     A 
Sbjct: 303 RIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELTPLFDAL 341


>gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
 gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
          Length = 361

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 111/353 (31%), Positives = 187/353 (52%), Gaps = 9/353 (2%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDR 65
           +  +FD     V R   LN    DP +  +      L +E   L + +   +  KE+  +
Sbjct: 1   MDEIFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQ 60

Query: 66  LCDNLILLELALEEDD-CSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHA 123
           L D+  +L   +++ D  S++++   + +  K ++E   +   L     D  +  +E+H 
Sbjct: 61  LDDDEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHG 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK 
Sbjct: 121 AAGGDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKY 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+
Sbjct: 181 ENGAHRVQRVPVTESAGRVHTSTATVGVMPE-EEDVDIDIDPKDIRVDVYRSSGAGGQHI 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+ ++  N    S 
Sbjct: 240 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSA 299

Query: 304 TEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 300 IGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351


>gi|118581059|ref|YP_902309.1| peptide chain release factor 1 [Pelobacter propionicus DSM 2379]
 gi|166223584|sp|A1ASD1|RF1_PELPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118503769|gb|ABL00252.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           propionicus DSM 2379]
          Length = 354

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   +R   L     DP +  N  E + L RE   L   ++  +  +  L +   
Sbjct: 1   MFDKIEELERRYQELEALLSDPAVISNQPEFRKLSREHADLTGLVAAYRRYRRVLEEMEG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + D   + +E    L+  K  +E + Q   L     D     LE+ AG GG ES
Sbjct: 61  NRELLADVDMKEMAEEELKVLEEEKERLEGEIQMLLLPRDPNDDKSVILEIRAGTGGDES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+A+  ++K E +   + E  G K     ++G   +  LK E G HR+
Sbjct: 121 ALFAGDLFRMYSRFADVNRWKVETISASESERGGFKEIIASVEGEGVFAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ +     + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMAEA-EDVDIDINPTDLKIDVYRSSGAGGQHVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG VV CQ+ERSQ KN+A+A  +L+ ++ +    ++E+ A +    K ++G G 
Sbjct: 240 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRIMD--SIQQEQNARMAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R  +       ++ GD+ + + A  A
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIVDALRA 341


>gi|303256163|ref|ZP_07342179.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|331001217|ref|ZP_08324843.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
 gi|302860892|gb|EFL83967.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|329568944|gb|EGG50740.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V+RL  ++   +DP +  N+ + + L +ER  ++  +   KE +    D     E+  
Sbjct: 11  QLVRRLEEIDQNLQDPDVTSNMDQFRALSKERAEIEPVVLKAKEYEQAEEDLAAAEEMLS 70

Query: 78  EEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +E+      E     ++   ++    +   L     D  + YLE+ AG GG ES  +A  
Sbjct: 71  DEEMKEFASEEIKATKKAIEQISSELEILLLPKDPNDEKNIYLEIRAGTGGDESALFAGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+R+AE++K++ E +     +  G K   + I G  AY  LK E G HR+ R+   
Sbjct: 131 LFRMYSRYAERQKWQVEFVSASPSDLGGYKEIVVKIVGQGAYSKLKFESGGHRVQRVPET 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ V P  D+  ++ I  S+ RID YRASGAGGQH+  T+SAVRITH+P
Sbjct: 191 ESQGRVHTSACTVAVLPEADEIGDVVIDPSELRIDVYRASGAGGQHIQKTESAVRITHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ ERSQHKNK +A  +L ++++  ++   E  A      K+ IG G    +IR
Sbjct: 251 TGIVVECQDERSQHKNKERAMGVLISRIHAAQV--AEVQAKESSMRKSLIGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   V D R N+       ++DGDLD  +   
Sbjct: 309 TYNY-PQGRVTDHRINLTLYKLDSIMDGDLDCLISPL 344


>gi|329766951|ref|ZP_08258479.1| peptide chain release factor 1 [Gemella haemolysans M341]
 gi|328837676|gb|EGF87301.1| peptide chain release factor 1 [Gemella haemolysans M341]
          Length = 362

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 189/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  +  +     +E++ ++  ++  +E +D +       EL
Sbjct: 7   LEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + ++ ++  +    E  +   L     D  +  +EV   AGG E+Q
Sbjct: 67  LEIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE + +K + LE  +    GIK    +I G + Y  +K E G HR+ 
Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEVIFIISGEDVYSKMKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR
Sbjct: 187 RVPTTESSGRIHTSTATVVVLPEA-EEIEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      K+++G G  
Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYD--KYQQEEQAKFDAERKSKVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|207721782|ref|YP_002252220.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
 gi|206586946|emb|CAQ17530.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
          Length = 356

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVAQYAVWKQAENDVATAQEL 64

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  + E      R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + +  +RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQ--EREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGDLD+ +    A
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAA 342


>gi|15801440|ref|NP_287457.1| peptide chain release factor 1 [Escherichia coli O157:H7 EDL933]
 gi|12514924|gb|AAG56069.1|AE005338_9 peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSPCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|305664895|ref|YP_003861182.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
 gi|88707725|gb|EAQ99965.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/337 (31%), Positives = 171/337 (50%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P +  +      L +E + L + +       +   +     E+  +
Sbjct: 8   VKQRFDEVSDLIIQPDVISDQKRYVQLTKEYKDLKDLMEKRDAYVELTNNIQEAEEIISD 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +L+     L   K  +    E  +   +     D+ D  +E+ AG GG E+  +A
Sbjct: 68  GSDAEMLEMAKMQLDEAKTALPKLEEDIKLMLIPKDPEDAKDVVVEIRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E R +KT  +++ +G   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYTKYCEGRGWKTNVIDLSEGTSGGYKEIQFEVSGADVYGTLKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   +  +++I   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVLPEA-EDFDVQIDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIR 313
           IPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +K+EE A    S  +      +IR
Sbjct: 247 IPTGLVAQCQDQKSQHKNKDKAFRVLRSRLYDLELARKQEEDAAKRNSQVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y       V D R  +      ++++GD+   +   
Sbjct: 307 TYNYA-QGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342


>gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
 gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
          Length = 357

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 196/354 (55%), Gaps = 17/354 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           + D  D  V++   L      P +  N    +  ++E   ++  +      K+ +  L D
Sbjct: 1   MLDKLDFIVEKYKELEAAVSKPEIIGNQPLWQKYIKEMSDMEPIVKTYSSFKKHKQELSD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAG 124
              L  LA    D  +       +  ++ E+  E +Q + LL      D  +  LE+ AG
Sbjct: 61  AKEL--LAGAGGDEEMKDLAKLEISGLEDEINKEEEQLKILLIPKDPRDEKNVILEIRAG 118

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  + + LLRMY+ +A+ + +KTE +E+++    GIK A +LIKG  A+  LK E
Sbjct: 119 TGGEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLIKGKGAFSRLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S+ R HTS +++ V P + D +E++++ +D R+D YR+SG GGQ VN
Sbjct: 179 SGVHRVQRVPTTESSGRVHTSAATVAVLPEM-DDVEVDLNPNDVRVDVYRSSGNGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH PTG+VV CQ E+SQ KNK +A+ +L+++LY L++   E+   + +  K+
Sbjct: 238 TTDSAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKM--EEQNKQLSDERKS 295

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++G G    +IR+Y   P   V D R  +      + ++GD+D+ ++  +   +
Sbjct: 296 QVGSGDRSERIRTYNF-PQGRVSDHRIGLTIYKLDNFMNGDIDEVIEGLITADQ 348


>gi|160893851|ref|ZP_02074634.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
 gi|156864503|gb|EDO57934.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 199/349 (57%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCD 68
           +FD  ++ V RL  LN +  DP +  +  + + LM+E+  L   +   KE +D    + D
Sbjct: 1   MFDKLEDLVDRLDTLNNQLTDPDIVSDQNKFRKLMKEQSELTPIVEKYKEYKDAKQTIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L++LE   +E+   + +E  +  +  ++      +   L     DS +  +E+ AGAGG
Sbjct: 61  SLLMLEEENDEELREMAKEELNEAKATVEKTENELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E GV
Sbjct: 121 DEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P   + +++EI+E+D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPKTESGGRIHTSTVTVAVMPEA-EEVDVEINENDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRKSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDL++ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PEGRVTDHRIKLTLYKLEQILNGDLNEIIDSLIAADQ 347


>gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
 gi|225207415|gb|EEG89769.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 186/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +   KE ++   +   
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVVNDQSRFRKLMKEQNDLTPIVEAYKEYKNCKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLSLLEEESDEEMKELAKEELSESKKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKEVVFMITGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K+         S+   G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQHSAEAEARRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDLDEVIDSLIAADQ 347


>gi|119361535|sp|Q24ML9|RF1_DESHY RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 355

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L     DP +  N  E +   + +  + + +   +E  + +        L  
Sbjct: 7   EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D    +     L+ +  + +  +       L     D  +  +E+ AGAGG E+  +
Sbjct: 67  EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE++ ++TE L     +  G K    LI+G  AY  LK E GVHR+ R+
Sbjct: 127 AGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + +++ I+ +D RID + +SG GGQ VNTT SAVRIT
Sbjct: 187 PTTESGGRIHTSTTTVAVLPEA-EEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + E +  +    ++++G G    
Sbjct: 246 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L G+LD+ + A +   +
Sbjct: 304 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 347


>gi|241890031|ref|ZP_04777329.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
 gi|241863653|gb|EER68037.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
          Length = 362

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  +  +     +E++ ++  ++  +E +D +       EL
Sbjct: 7   LEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + ++ ++  +    E  +   L     D  +  +EV   AGG E+Q
Sbjct: 67  LEIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K E G HR+ 
Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR
Sbjct: 187 RVPTTESSGRIHTSTATVVVLPEA-EEIEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      K+++G G  
Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYD--KYQQEEQAKFDAERKSKVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|332534752|ref|ZP_08410580.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035839|gb|EGI72323.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 248

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 153/246 (62%), Positives = 189/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  DSNDAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E  DG+ AGIK
Sbjct: 1   MFSGPHDSNDAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+   G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ S
Sbjct: 61  GATVRFVGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQ++       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG+LD F
Sbjct: 181 LELQQQNAEKQTQEDAKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGNLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|229917064|ref|YP_002885710.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
 gi|259585222|sp|C4KYV2|RF1_EXISA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229468493|gb|ACQ70265.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
          Length = 356

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 109/350 (31%), Positives = 181/350 (51%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   LN    DP +  +  + +   +E+  L+  +   ++ ++       
Sbjct: 1   MFDRLSVLEDRYMQLNEMLADPEVLSDSTKLRQYSKEQAQLEETVQMYRQYKETSQAFKE 60

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              +  +   D  + +   + +  ++ EV+  +       L     D  +  +EV   AG
Sbjct: 61  AKSMLEDRTLDAEMRELAKEEMNLLEPEVKELEAKLRILLLPKDPNDEKNVIVEVRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L +MYTR+AE++ +K E ++ +  E  G K  T +I G  AY  LK E G
Sbjct: 121 GDEAALFAGDLYKMYTRFAERQNWKVELIDANYTELGGFKEVTFMINGAGAYSKLKFENG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +E+ I   D R+DT+ +SG GGQ VNTT
Sbjct: 181 AHRVQRVPSTESGGRIHTSTATVAVLPEA-EDVEVHIDMKDVRVDTFTSSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTE 305
            SAVR+THIP+G+VV CQ E+SQHKNK +A  +LRA+LY+ ++ +  EE++   +S+   
Sbjct: 240 QSAVRLTHIPSGLVVSCQDEKSQHKNKDKAMKVLRARLYDKMQSEHMEELSAQRKSAVGT 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +IR+Y   P   V D R  +       VL G+L+D + A +  ++
Sbjct: 300 GDRSERIRTYNF-PQSRVTDHRIGLTLQKLDRVLAGELEDIIDALIMDEQ 348


>gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
 gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
          Length = 362

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  +N         +++   + L RER  L+  +      Q    D     E+
Sbjct: 9   LGQLSERLLEVNQLLSTEEATRDMDTYRKLNRERAELEPVVDLFHAYQACEGDIAAAREM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + +       E  +   ++ L  +  Q + L     D    +LEV AG GG E+  +A
Sbjct: 69  AEDPEMREFADTEIKEGEAKLALLDKELQTQLLPKDPNDERSVFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+R+++ E +    GE  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRFAERRRWQVEVVSESPGEMGGYKEIIARIAGQGAYSVLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P VD+  ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRVHTSACTVAIMPEVDEVNDVVLNNADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGVVV+CQ  RSQH+NKAQA  +L A++ + ++  R + A    + K+ +G G    +
Sbjct: 249 IPTGVVVECQDGRSQHQNKAQAMRVLCARIKDAQV--RAQNAETAATRKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DG++ +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKMDAIMDGEISELTGALMA 346


>gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
 gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   +    +    +K E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLKETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G+LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQ 346


>gi|317495271|ref|ZP_07953641.1| peptide chain release 1 [Gemella moribillum M424]
 gi|316914693|gb|EFV36169.1| peptide chain release 1 [Gemella moribillum M424]
          Length = 362

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  +  +     +E++ ++  ++  +E ++ +       EL
Sbjct: 7   LEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKNIVQQIADTKEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + ++ ++  +    E  +   L     D  +  +EV   AGG E+Q
Sbjct: 67  LEIEEDKEMKEMMQEEIKELEPSLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K E G HR+ 
Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR
Sbjct: 187 RVPTTESSGRIHTSTATVVVLPEA-EEIEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      K+++G G  
Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYD--KYQQEEQAKFDAERKSKVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|307566238|ref|ZP_07628684.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
 gi|307345042|gb|EFN90433.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
          Length = 374

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 121/359 (33%), Positives = 205/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++  L      D           +T+ P  W++   A+  M++ + ++  +    + 
Sbjct: 10  ILSRVESLKRYLGIDKKRIEFEEEQLRTQAPDFWESPDYARQQMKKVKEIERWVKGYDKA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  +  +  +   ++       E      ++   +E  + +++L  E D  +  ++++
Sbjct: 70  KAQAEELQLAFDFYKDK--LVTEDEVDTMYNKVVSTIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RW E   +K    +I  G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWAEMLMRMYMRWGEAHGYKVTISDILSGDEAGIKSVTMKFESGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY  E++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNRAKAMQLLKSQLYNREMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E++K +I WG QIRSYV    + VKD RTN + +    V++G +DDF+KA L 
Sbjct: 308 EAQAKVEAAKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVEGVMNGKIDDFIKAYLM 365


>gi|294631400|ref|ZP_06709960.1| peptide chain release factor 1 [Streptomyces sp. e14]
 gi|292834733|gb|EFF93082.1| peptide chain release factor 1 [Streptomyces sp. e14]
          Length = 355

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 175/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     EL
Sbjct: 5   VEELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKELDKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+  +KTE ++  + E  G K   + +K       G   +  LK E GVH
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQIEPGQGVWARLKYEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VNTTDS
Sbjct: 183 RVQRVPATESQGRIHTSAAGVLVTPEA-EEVDVEINPNDLRIDVYRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+   + 
Sbjct: 242 AVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARRSQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R   +  +   VLDGDL   ++A +
Sbjct: 302 RSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDLAAVIQACV 344


>gi|254387523|ref|ZP_05002762.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294815090|ref|ZP_06773733.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|326443452|ref|ZP_08218186.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|197701249|gb|EDY47061.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294327689|gb|EFG09332.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
          Length = 356

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 176/344 (51%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +   + L  +  DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 5   VEDLIGEHAGLEKQLADPSVHADQANARKLSKRYAELTPIVGTYRSWKLTGEDIDTAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +  QR +   E  +   +    +D  D  LEV AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKELEQRREELTEKLRLLLVPRDPSDDKDVILEVKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+  +KTE +   + E  G K   + +K       G   +  LK E GVH
Sbjct: 123 DLLRMYLRYAERVGWKTEIINSTESELGGYKDVQVAVKTKGNAEPGQGVWARLKYEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + I++EI+ +D RID YR+SG GGQ VNTTDS
Sbjct: 183 RVQRVPATESQGRIHTSAAGVLVTPEA-EEIDVEINPNDLRIDVYRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E+ A     S+   + 
Sbjct: 242 AVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADARRSQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 RSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 344


>gi|296387792|ref|ZP_06877267.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           PAb1]
          Length = 248

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 156/246 (63%), Positives = 193/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR   +   E SK++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++
Sbjct: 181 LEMQKRTAASQALEDSKSDIGWGHQIRSYVL-DQSRIKDLRTGIERSDCDKVLDGDLDEY 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 LEASLK 245


>gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
 gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
          Length = 361

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 118/340 (34%), Positives = 180/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   ++    D     N    + L RE   L+  ++  K  Q    D++   +L
Sbjct: 9   LELLVERHEEVSALLSDAETISNQERFRELSREYSELEEVVATFKRYQTA-KDDMEAAQL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L +DD  + +   + L   K  +E  + E     L     DS + +LE+ AG GG E+ 
Sbjct: 68  MLLDDDPDMREMAEEELDAAKEAIEALEIELQRLLLPKDPKDSANVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+ K++ E L    GE  G K     ++G + Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERMKWRLEVLSERAGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V     +   IEI+++D R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVMAEAAEVDAIEINKADIRVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL    E +   E A    +         
Sbjct: 248 ITHLPTGIVVECQDERSQHKNRARAMSLLQAKLDTAAEEKAASEQAQERRNLVGTGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+      ++++GDLD  +   
Sbjct: 308 RIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDLDSVVTPL 346


>gi|219670829|ref|YP_002461264.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
 gi|254790878|sp|B8FZ76|RF1_DESHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219541089|gb|ACL22828.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
          Length = 355

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 11/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L     DP +  N  E +   + +  + + +   +E  + +        L  
Sbjct: 7   EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D    +     L+ +  + +  +       L     D  +  +E+ AGAGG E+  +
Sbjct: 67  EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE + ++TE L     +  G K    LI+G  AY  LK E GVHR+ R+
Sbjct: 127 AGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + +++ I+ +D RID + +SG GGQ VNTT SAVRIT
Sbjct: 187 PTTESGGRIHTSTTTVAVLPEA-EEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + E +  +    ++++G G    
Sbjct: 246 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L G+LD+ + A +   +
Sbjct: 304 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 347


>gi|116333899|ref|YP_795426.1| peptide chain release factor 1 [Lactobacillus brevis ATCC 367]
 gi|122269414|sp|Q03QX7|RF1_LACBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116099246|gb|ABJ64395.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           brevis ATCC 367]
          Length = 361

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 111/354 (31%), Positives = 184/354 (51%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  +FD       R   LN    DP +  +      L +E   L   +    + QD   +
Sbjct: 1   MDEMFDKLQAVADRYDELNELISDPEVIADTQRFMALSKEEGELRETVDKYHQYQDVTQQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAG 124
           + D+  +L   L+ D  S++++    L   K  +E   +   L     D  +  +E+H  
Sbjct: 61  IADDDEMLHDKLDADMESMIKDELKELTAQKAALEEDIKVLLLPKDPNDDKNIIMEIHGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY+++AE++ ++ E ++ +  E  G K   ++I G   Y  LK E
Sbjct: 121 AGGDEASLFAADLFSMYSKYAERQGWQIEVVDENATEVGGFKEIVMMITGNKVYSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R D YR+SGAGGQH+N
Sbjct: 181 NGAHRVQRVPVTESAGRVHTSTATVGVMPE-EEDVDIDIDPKDIRTDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +LRA++Y+    K++E +      K+
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILRARVYDY--YKQQEESAYNAERKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 298 AVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDDIIDALIVSDQ 350


>gi|88860263|ref|ZP_01134901.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
 gi|88817461|gb|EAR27278.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
          Length = 260

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 155/256 (60%), Positives = 194/256 (75%), Gaps = 1/256 (0%)

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
            ++E  +F  + SG+ D NDAYL++ +G+GGTE+QDW N+LLRMY RWA+ + FK E +E
Sbjct: 3   AKLEKLEFRRMFSGDFDQNDAYLDLQSGSGGTEAQDWCNILLRMYLRWADAKGFKAELVE 62

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             DG+ AGIK AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP +D
Sbjct: 63  ATDGDVAGIKGATVRIVGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEID 122

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNK QA
Sbjct: 123 DNIKIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNERSQHKNKDQA 182

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
              L+AKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +  
Sbjct: 183 MKQLKAKLFELELQKQNAEKQTQEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQ 241

Query: 337 DVLDGDLDDFMKATLA 352
            VLDGDLD F++A+L 
Sbjct: 242 AVLDGDLDKFIEASLK 257


>gi|238783270|ref|ZP_04627295.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
 gi|238715863|gb|EEQ07850.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
          Length = 360

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 178/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D     E+
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQEDIEAA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  ML--DDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G  A+G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+   A+   +         
Sbjct: 246 ITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQLAEASERRNLLGTGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|257870909|ref|ZP_05650562.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
 gi|257805073|gb|EEV33895.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
          Length = 357

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    +   +  ++ +       EL
Sbjct: 5   LQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E +  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LGENLDAEMAEMAKEELSDLKKEKDVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E ++ +     G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAETQGWKVEVMDANVTGIGGYKEVIMMISGENVYSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I++ D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIDIADKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--QIQQEARSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALIMYDQ 347


>gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|32171533|sp|Q8CNI7|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153098|sp|Q5HMA4|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
 gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
 gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + ++  E  D   ++   +    +K E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEDMLNETSDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     + +++G+LD+ ++A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGNLDEIVEALTLSEQ 346


>gi|282882091|ref|ZP_06290732.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
 gi|281298121|gb|EFA90576.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
          Length = 358

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 11/343 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELA 76
             R + L     D ++  N    +    E   L   +S  +E +   + L D+  LL   
Sbjct: 9   EDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKALLAEK 68

Query: 77  LEEDDCSILQE-TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           L++D   ++++  S N + ++   E  +   +     D  +  +E+ AGAGG E+  +A 
Sbjct: 69  LDDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L R Y R+AE+  +K + +  ++    G K    +I G  AY  LK E GVHR+ R+  
Sbjct: 129 TLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P V + +E+EI  ++ + D +RASG GGQ VNTTDSAVR+THI
Sbjct: 189 TESGGRIHTSTATVAVLPEV-EDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAVRLTHI 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V+ CQ E+SQ  NK +A  +LRAKLY+L++  +E+         +++G G    +I
Sbjct: 248 PTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKI--QEQNEKNSAQRLSQVGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N        + DG+LD+ + A  A  +
Sbjct: 306 RTYNY-PQGRVTDHRINYTTHQIVSINDGELDELIDALTAADQ 347


>gi|33241929|ref|NP_876870.1| peptide chain release factor 2 [Chlamydophila pneumoniae TW-183]
 gi|33236439|gb|AAP98527.1| translation releasing factor RF-2 [Chlamydophila pneumoniae TW-183]
          Length = 253

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 142/247 (57%), Positives = 182/247 (73%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LSGEAD N  +L ++AGAGGTES DW  ML RMY+RWA K ++  E ++  DGE  GIK
Sbjct: 1   MLSGEADKNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             T+   G  AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI  +
Sbjct: 61  HVTVKFSGMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPN 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT+R+SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+     ML+AKLY+
Sbjct: 121 DLRIDTFRSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQ 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345
             LQ+R E  ++    K EI WG QIR+YV QPY +VKD+RT  E  +   +LDG+ LD+
Sbjct: 181 QVLQERLEKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDE 240

Query: 346 FMKATLA 352
           F+KA LA
Sbjct: 241 FIKAYLA 247


>gi|258592988|emb|CBE69299.1| peptide chain release factor 1 [NC10 bacterium 'Dutch sediment']
          Length = 358

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR + +  +  DP +  +    + L +    L+  +   ++ +  L D      L
Sbjct: 8   LDAIEQRSTEVLLQMGDPAIITDQARFQRLAKAHAELEPVVEAYQQYRKLLQDLEETKAL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  +  + +     L+ + ++     E      L    AD     LEV AGAGG E+ 
Sbjct: 68  LHDGTEDDVRELAEAELKELAVKREKLEEELTLLLLPRDPADEKSIILEVRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY R+AE R +K E L        G+K A L I+G  AY  LK E GVHR+ 
Sbjct: 128 LFAAELVRMYGRYAELRGWKVEMLSSSQTGVGGVKEAILSIEGRGAYSRLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + +EI+I   D RID +R++G GGQ VNTTDSAVR
Sbjct: 188 RVPVTESSGRIHTSTVTVAVLPEA-EDVEIQIDPKDLRIDVFRSTGPGGQSVNTTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKN+A+A  +LRA+L  LE    ++ A I ++ + ++G G  
Sbjct: 247 ITHLPTGMVVSCQDEKSQHKNRAKAMKVLRARL--LEAATAQQAAEISQARRQQVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +   S   +L+G++++ + A  A  +
Sbjct: 305 SERIRTYNF-PQGRVTDHRIGLTLHSLPRILEGEIEELIGALAASDQ 350


>gi|324113971|gb|EGC07945.1| peptide chain release [Escherichia fergusonii B253]
          Length = 360

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEGRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           L20]
 gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 333

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 110/321 (34%), Positives = 175/321 (54%), Gaps = 7/321 (2%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
             +  + +   +E   L+  ++     +    D      L  + D   +  E     +  
Sbjct: 2   INDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQILLDDPDMKDMAAEEIAENKAE 61

Query: 96  KLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
              +E + Q   L     D  +A+LE+ AG GG E+  +A  L RMY+R+ E ++++ E 
Sbjct: 62  IENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEE 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +  ++ E+ G K   + I G   YG LK E G HR+ R+   +S  R HTS  ++ V P 
Sbjct: 122 MSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPE 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA
Sbjct: 182 LPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +L +++ ++E  +  + A   ++ +  +G G    +IR+Y   P   V D R N+ 
Sbjct: 242 KALAVLASRIVQVE--QERQAAEQADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLT 298

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
                +V++G +D+ ++  + 
Sbjct: 299 VYRLDEVMNGKIDELIQPIIT 319


>gi|165977491|ref|YP_001653084.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877592|gb|ABY70640.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 333

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 110/321 (34%), Positives = 175/321 (54%), Gaps = 7/321 (2%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
             +  + +   +E   L+  ++     +    D      L  + D   +  E     +  
Sbjct: 2   INDQDKFRAYSKEYSQLEEVVTTFNRWKKLNSDIEEAQILLDDPDMKEMAAEEIAENKAE 61

Query: 96  KLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
              +E + Q   L     D  +A+LE+ AG GG E+  +A  L RMY+R+ E ++++ E 
Sbjct: 62  IENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEE 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +  ++ E+ G K   + I G   YG LK E G HR+ R+   +S  R HTS  ++ V P 
Sbjct: 122 MSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPE 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA
Sbjct: 182 LPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +L +++ ++E  +  + A   ++ +  +G G    +IR+Y   P   V D R N+ 
Sbjct: 242 KALAVLASRIVQVE--QERQAAEQADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLT 298

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
                +V++G +D+ ++  + 
Sbjct: 299 VYRLDEVMNGKIDELIQPIIT 319


>gi|161870534|ref|YP_001599706.1| peptide chain release factor 1 [Neisseria meningitidis 053442]
 gi|189039981|sp|A9M1Q8|RF1_NEIM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161596087|gb|ABX73747.1| peptide chain release factor I [Neisseria meningitidis 053442]
          Length = 358

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 177/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +     ++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|291612728|ref|YP_003522885.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
 gi|291582840|gb|ADE10498.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
          Length = 360

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  +          +++   + L RER  ++  +      Q    D     E+
Sbjct: 9   LAQLSERLDEVTRLLSSEEATRDMDAFRRLNRERAEIEPVVDLYHAWQACEADIATAQEM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + D     + E     +R++      Q + L     D  + +LEV AG GG E+  +A
Sbjct: 69  AGDPDMREFAEAEIKAGRERLEQLEVDLQKQLLPKDPNDERNVFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY R+AE+R+++ E +    GE  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDIFRMYVRFAERRRWQVEIISESPGEMGGYKEVIARIIGQGAYSVLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D+  E+E++ ++ RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAILPEADEVGEVELNPAELRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV+CQ  RSQH+NKAQA  +L A++ + +  ++E  + I    K+ +G G    +
Sbjct: 249 LPTGTVVECQDGRSQHQNKAQAMRVLAARIKDKQ--EQEAHSKIAAERKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGD+ +   A +A
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKMDQIMDGDISELTNALMA 346


>gi|313905737|ref|ZP_07839097.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
 gi|313469444|gb|EFR64786.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
          Length = 360

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 179/345 (51%), Gaps = 6/345 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  +  +  DP    +    + LM+E+  L          +         LEL
Sbjct: 5   LEDVQIRLDEILCQLSDPATAGDSARMQKLMKEQAELSPVAEMYAAYRKNEETISDSLEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  K          Q   L     D     +E+ AGAGG E+ 
Sbjct: 65  LESESDPDMREMLKEELQEAKANRSKYERELQLLLLPKDPNDDKSVIVEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY R+AEK++++TE + I +    G+K  +  I G  AY  LK E GVHR+ 
Sbjct: 125 LFAYEIYRMYVRYAEKQRWQTELMSIDETGLGGLKECSFEISGSGAYSKLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P VDD I+IEI + D RID  RASG GGQ VNTTDSAVR
Sbjct: 185 RVPATESGGRIHTSTITVAVMPKVDDDIQIEIPDKDVRIDVMRASGNGGQCVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +TH PTG+V+  Q E+SQ +NKA+AW +LR+KLY LE++KR +  A++  S         
Sbjct: 245 LTHYPTGIVIYSQTEKSQIQNKAKAWELLRSKLYVLEMEKRHDAEADLRRSQIGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L+GDLD+ ++   A  +
Sbjct: 305 KIRTYNF-PQGRVTDHRIKLTLHQIDSILNGDLDELIQTLTAADQ 348


>gi|269926759|ref|YP_003323382.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790419|gb|ACZ42560.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 355

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 121/345 (35%), Positives = 184/345 (53%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN  +R   L+    DP ++ +      + RER  L++ +S  +E +           L
Sbjct: 5   LDNIEKRFDELDRMMSDPEIFSDPSRLMEVARERSELEDIVSLYREYKKVKLTREEDRRL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +E+ D  I Q   +  +++    +  +       L     D  D  +E+ AG GG E+ 
Sbjct: 65  -MEDPDPDIRQMAEEEYEQLADREKDLEERLKIALLPKDPNDEKDVIVEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ +KTE L   + +  G K     +KG  AY  LK E GVHR+ 
Sbjct: 124 LFAADLYRMYTRYAERQGWKTEVLSTSESDAGGFKEIIFEVKGRGAYSRLKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI   D RID +R++G GGQ VNTTDSAVR
Sbjct: 184 RVPVTESQGRIHTSTATVAVLPEA-EEVEVEIDPEDLRIDVFRSTGHGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           ITH+PTG+VV CQ E+SQ KN+A+A  +LRA+LYE+E +KREE    +  S         
Sbjct: 243 ITHLPTGLVVTCQDEKSQLKNRAKAMAVLRARLYEMERRKREEELGQVRRSMVGTGERSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R     ++   +LDG++D  +++     +
Sbjct: 303 KIRTYNF-PQDRVTDHRIKESFSNLPAILDGEIDRIIESLQVADR 346


>gi|221068955|ref|ZP_03545060.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|299531475|ref|ZP_07044881.1| peptide chain release factor 1 [Comamonas testosteroni S44]
 gi|220713978|gb|EED69346.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|298720438|gb|EFI61389.1| peptide chain release factor 1 [Comamonas testosteroni S44]
          Length = 359

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +    S          D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEADIAAAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE   + +   +++E +    LL     D+  A++E+ AG GG ES  +A
Sbjct: 69  LDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A    +K E +   + E  G K   L I+G N YG L+ E G HR+ R+ 
Sbjct: 129 GDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       V++GDL D ++A    +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGDVIQALQHAR 348


>gi|1865700|emb|CAA67778.1| peptide release factor 2 [Bacillus firmus]
          Length = 282

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 138/282 (48%), Positives = 191/282 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L    G  D +   +R++ L+     P  W +   A+ ++ E   L   ++   E+
Sbjct: 1   MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++  +  +  EL  EE D  + +E    ++ +   +   + + LLS   D N+A LE+H
Sbjct: 61  EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW+E+R FK E ++   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 121 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EI+I   D ++DTYRASGAGGQH
Sbjct: 181 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +NTTDSA+RITH+PT  VV CQ ERSQ KN+ QA  ML+AKL
Sbjct: 241 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 282


>gi|157370232|ref|YP_001478221.1| peptide chain release factor 1 [Serratia proteamaculans 568]
 gi|166977369|sp|A8GDA3|RF1_SERP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157321996|gb|ABV41093.1| peptide chain release factor 1 [Serratia proteamaculans 568]
          Length = 361

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 179/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +       + L RE   L +      E + ++ D+L   E+
Sbjct: 9   LEALQERHEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLEWR-KVQDDLATAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  D +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEELKDAKAATEELEQQLQVLLLPKDPDDERDCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G   +G LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGTGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQPIV 345


>gi|225012847|ref|ZP_03703280.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
 gi|225002969|gb|EEG40946.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
          Length = 314

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 146/307 (47%), Positives = 209/307 (68%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   +S  + I+  + D  +L+E      D   + E +   +     +E  +F 
Sbjct: 1   MKQLRTLKKWVSDYEIIKQGIDDLEVLMEFEK-SGDAEAV-EVNSQYESSLELLEALEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA ML+RMY  W EK+ +K + L    G+ AGI
Sbjct: 59  NMLSDEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWGEKQGYKIKELNHQAGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL ++G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI IS 
Sbjct: 119 KTVTLELEGDFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIVISP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD   +T RASGAGGQ+VN  ++AVR+ H PTG++++  + RSQ +NK +A  +LR++LY
Sbjct: 179 SDYTWETMRASGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLENKNKAMQLLRSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQK+    +  E+SK +I WG QIR+YV+ PY++VKD+RT  E T    V++G +D 
Sbjct: 239 EIELQKKLSARDEIEASKKKIEWGSQIRNYVMHPYKLVKDVRTQHEVTDVDAVMNGQIDP 298

Query: 346 FMKATLA 352
           F+KA L 
Sbjct: 299 FLKAYLM 305


>gi|169826579|ref|YP_001696737.1| peptide chain release factor 1 [Lysinibacillus sphaericus C3-41]
 gi|238688208|sp|B1I069|RF1_LYSSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168991067|gb|ACA38607.1| Peptide chain release factor 1 (RF-1) [Lysinibacillus sphaericus
           C3-41]
          Length = 358

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 178/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E ++     + 
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKNVKEQLVD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   +    +K + E  +     LL      D+ +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V + +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEV-EEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ +  +  +E    I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVAD--MYMQEAQKEIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ +   +  ++
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQ 347


>gi|194468250|ref|ZP_03074236.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
 gi|194453103|gb|EDX42001.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
          Length = 362

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 110/356 (30%), Positives = 183/356 (51%), Gaps = 14/356 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +        +E   L   +    + +    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKFSKEEGSLRETVEKYNQYKKVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVH 122
            + D+  LL    ++D  ++ +E     +  + ++E K+ E LL      D  +  +E+ 
Sbjct: 62  TISDDEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIR 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK
Sbjct: 121 GAAGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQH
Sbjct: 181 FENGAHRVQRVPVTESAGRVHTSTATVGVMPEA-EDVDVDIDPKDIRVDVYRSSGAGGQH 239

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+    +++E +   +  
Sbjct: 240 VNKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY--YQQQEQSAYDQKR 297

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K  IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 298 KDAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 352


>gi|163815255|ref|ZP_02206632.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
 gi|158449450|gb|EDP26445.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
          Length = 358

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 200/349 (57%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCD 68
           +FD  +  V +L  +N +  DP +  +  + + LM+E+  L   +   KE +D    + D
Sbjct: 1   MFDRLEELVDKLDTINNQLTDPDVVTDQNKFRKLMKEQSDLVPIVDKYKEYKDAKTTIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L +LE   +E+   + +E  ++ + R++   +  +   L     DS +  +E+ AGAGG
Sbjct: 61  SLEILEEENDEELREMAKEEMNDAKSRLETIEQELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E GV
Sbjct: 121 DEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P   + +++EI+++D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPKTESGGRIHTSTVTVAVMPEA-EEVDVEINDNDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRKSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GDL++ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQ 347


>gi|323187441|gb|EFZ72750.1| peptide chain release factor 1 [Escherichia coli RN587/1]
          Length = 360

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPRDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|295111719|emb|CBL28469.1| bacterial peptide chain release factor 1 (bRF-1) [Synergistetes
           bacterium SGP1]
          Length = 357

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 174/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +    +  +  DP    +    + L ++R  L+  +   +  +  +       +L
Sbjct: 7   LQAIEKEFLDIEERMGDPATASDPRALQDLGKKRAQLEPVVEKYRAYRAAVASIAEARDL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
                D  I +   + L  ++ ++E  + E     L     D     +E+ AG GG E+ 
Sbjct: 67  LK-GGDPEIAELAREELSELEPQIENFEKELTILLLPKDPNDEKSVIVEIRAGVGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+ E++++K E ++       G K     I    AY  +K E G HR+ 
Sbjct: 126 LFAADLYRMYTRFCERQRWKIEVIDSSLIGLGGYKEVIFRIDSHGAYSMMKYESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P V + IEIEI   D ++DTYR+SGAGGQHVN TDSAVR
Sbjct: 186 RVPVTEASGRIHTSSATVAVMPEV-EDIEIEIRPEDLKVDTYRSSGAGGQHVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+V  CQ ERSQ KN+A+A   L+A+LY LE +K+  E A+             
Sbjct: 245 ITHLPTGIVATCQDERSQIKNRARAMAYLKARLYALEQEKQNAEQASERRGMIGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+      + LDGDL + + A +  ++
Sbjct: 305 RIRTYNF-PQNRITDHRINLTLYKLDNYLDGDLFEMIDAMILAEQ 348


>gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
 gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
          Length = 361

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 111/353 (31%), Positives = 187/353 (52%), Gaps = 9/353 (2%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDR 65
           +  +FD     V R   LN    DP +  +      L +E   L + +   +  KE+  +
Sbjct: 1   MDEIFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQ 60

Query: 66  LCDNLILLELALEEDD-CSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHA 123
           L D+  +L   +++ D  S++++   + +  K ++E   +   L     D  +  +E+H 
Sbjct: 61  LDDDEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHG 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK 
Sbjct: 121 AAGGDEGSLFAVDLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKY 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+
Sbjct: 181 ENGAHRVQRVPVTESAGRVHTSTATVGVMPE-EEDVDIDIDPKDIRVDVYRSSGAGGQHI 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+ ++  N    S 
Sbjct: 240 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSA 299

Query: 304 TEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 300 IGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351


>gi|968930|gb|AAC43437.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|322383119|ref|ZP_08056946.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321152781|gb|EFX45407.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 356

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 185/346 (53%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   L+    DP +  +  + +   +E+  L  A     E +    +L  
Sbjct: 1   MLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLEA 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGG 127
              + +  L+++   +++   + L   K E+E   +   L     D+ +  +EV   AGG
Sbjct: 61  AKAMQKEKLDDEMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE L+ +  +  G K  T +IKG  AY  LK E G 
Sbjct: 121 DEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P + + I+IEI +SD R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPVTESGGRIHTSTSTVAVMPEM-EDIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V  CQ  +SQ+ NKA+A  +LRA++Y+    ++EE A      K+++G
Sbjct: 240 SAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD--QVRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R  +       +L GDL++ + A 
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITAL 342


>gi|300770142|ref|ZP_07080021.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762618|gb|EFK59435.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 364

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/344 (28%), Positives = 176/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      +R   +  +  +P    ++     L +E + L   +      ++ + +   
Sbjct: 8   MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLSKIVDQYHIYKNMVSNIDA 67

Query: 72  LLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   + L  +  + E + ++   +L      D+ +A +E+  G GG
Sbjct: 68  NKDILANEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTGG 127

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+ E + ++ E +++ +G   G K   L + G + YG LK E GV
Sbjct: 128 DEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGEDVYGQLKYESGV 187

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++E++  D  + T R+ GAGGQ+VN  +
Sbjct: 188 HRVQRVPDTETQGRVHTSAASVAVLPEA-EDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 246

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           + V++TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+  +IA   ++  +  
Sbjct: 247 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKKHGDIAAKRKTMVSTG 306

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               ++R+Y   P   V + R  +   +   V+DGD+   + A 
Sbjct: 307 DRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDAL 349


>gi|146329088|ref|YP_001209002.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
 gi|146232558|gb|ABQ13536.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
          Length = 365

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 123/339 (36%), Positives = 182/339 (53%), Gaps = 9/339 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   LN    DP +  +    +   +E   L   +   +EI+    +   L EL   ED
Sbjct: 17  ERYEELNALLADPSVAADPDLLRRYGQEHAQLAPIVEIFQEIEHLQQEANDLKEL---ED 73

Query: 81  DCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +    E S+NL++ +   +      +     D  + +LE+ AG GG E+  +A  
Sbjct: 74  DAEMAEYVAAEQSENLKKTEECEQKLARLMIPQDPLDEANIFLEIRAGTGGDEAAIFAGD 133

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+RMY R+AE R ++   L  + GE  G +     + G   Y  LK E G HR+ R+   
Sbjct: 134 LMRMYARFAENRGWQISVLSENAGEFGGYREIICRVSGQRVYSTLKFESGAHRVQRVPET 193

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +++ R HTS +++ V P  D+  +IEI+ +D R+DT+RASGAGGQHVN TDSA+RITH+P
Sbjct: 194 EASGRIHTSAATVAVLPESDEIEDIEINPADLRVDTFRASGAGGQHVNKTDSAIRITHLP 253

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSY 315
           TG+VV+CQ+ERSQHKN+A+A   L AKL + E Q  E EIA   +S         +IR+Y
Sbjct: 254 TGIVVECQEERSQHKNRAKAMRWLYAKLMDRERQAAEKEIAAERKSLVGTGDRSERIRTY 313

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              P   V D R N+   +  DVL+G LD  +      +
Sbjct: 314 NY-PQGRVTDHRINLTLYALDDVLNGQLDLLVIPLQQAQ 351


>gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4]
 gi|189039974|sp|A5G8T7|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           uraniireducens Rf4]
          Length = 355

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 105/339 (30%), Positives = 175/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  E + L RE   L   +   +  +  L +     EL
Sbjct: 5   IEELERRYQELEALLADPAVLGNQPEFRKLSREHSDLSALVESYRNYKKVLVEITGNREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +   + L+  +  +E + +   L     D+    LE+ AG GG E+  +A
Sbjct: 65  LADPEMKEMAEAELEALEEQQAALEAEIKLLLLPKDPNDNKSVILEIRAGTGGDEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE  +++ E +   + E+ G K     ++G   +  LK E G HR+ R+ 
Sbjct: 125 GDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASVEGDGVFAKLKYESGTHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P   + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH
Sbjct: 185 ETEAQGRIHTSACTVAIMPEA-EDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV CQ+ERSQ KN+A+A  +L+ ++  L+   +E+ A +    K ++G G    +
Sbjct: 244 LPTGTVVACQEERSQIKNRAKAMKVLKTRI--LDTIMQEQSARLAADRKQQVGSGDRSER 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  +       ++ GD+ +   + 
Sbjct: 302 IRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEITDSL 339


>gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090]
 gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140]
 gi|240118391|ref|ZP_04732453.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|75432438|sp|Q5F750|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA
           1090]
 gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
          Length = 358

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D R DT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREVQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|331652249|ref|ZP_08353268.1| peptide chain release factor 1 [Escherichia coli M718]
 gi|331050527|gb|EGI22585.1| peptide chain release factor 1 [Escherichia coli M718]
          Length = 360

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+A+ R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYADARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|89897680|ref|YP_521167.1| peptide chain release factor 1 [Desulfitobacterium hafniense Y51]
 gi|89337128|dbj|BAE86723.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 360

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L     DP +  N  E +   + +  + + +   +E  + +        L  
Sbjct: 12  EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 71

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D    +     L+ +  + +  +       L     D  +  +E+ AGAGG E+  +
Sbjct: 72  EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE++ ++TE L     +  G K    LI+G  AY  LK E GVHR+ R+
Sbjct: 132 AGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + +++ I+ +D RID + +SG GGQ VNTT SAVRIT
Sbjct: 192 PTTESGGRIHTSTTTVAVLPEA-EEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + E +  +    ++++G G    
Sbjct: 251 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L G+LD+ + A +   +
Sbjct: 309 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 352


>gi|78188007|ref|YP_378345.1| peptide chain release factor 2 [Chlorobium chlorochromatii CaD3]
 gi|78170206|gb|ABB27302.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           chlorochromatii CaD3]
          Length = 312

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 138/308 (44%), Positives = 205/308 (66%), Gaps = 1/308 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++E   L +      ++  +       +++ALE  D S   E ++ +  ++  +   +F
Sbjct: 1   MLKELADLKSWTDEYDKLSAKARYCQDEMDIALELQDESFGDELTNTITELEQAIAAIEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            ++LSG+ D+ +A + +HAGAGGTE+QDWA ML RMY RWAE++ FKT   +  +G+ AG
Sbjct: 61  RNMLSGKDDAGNAMVTIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKTFTDDYQEGDGAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK+ATL I+G  AYG+LK E GVHRLVR+SP+D+N+RRHTSF+S++ YP     +EIE+ 
Sbjct: 121 IKTATLEIQGAYAYGYLKAENGVHRLVRVSPFDANARRHTSFASVYTYPEAPPDVEIEVR 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D  + T+R+ G GGQ+VN  ++AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+L
Sbjct: 181 KEDLELSTFRSGGKGGQNVNKVETAVRIKHLPTGIVVGCQEERSQLQNRERAMKMLMAQL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           Y+ + ++ +      E  K +I WG QIRSYVL   + +KD RTN E+     VLDGDLD
Sbjct: 241 YQRQREEEDAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLD 299

Query: 345 DFMKATLA 352
           DFM+  L+
Sbjct: 300 DFMEKYLS 307


>gi|302558381|ref|ZP_07310723.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
 gi|302475999|gb|EFL39092.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
          Length = 358

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 175/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     EL
Sbjct: 5   VEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWKQTGDDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  D  ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEVDVEINPNDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+  
Sbjct: 242 TDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDL   ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLAAVIQACV 347


>gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 360

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 194/344 (56%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            ++  +++  L     DP + ++  + + + +E + L   ++   E +    ++ +   L
Sbjct: 9   LESIEEKVKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVSRQIEEVKQL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L    ++D   + +E  ++L++ + ++E K +   L     D  +  LE+  GAGG E+ 
Sbjct: 69  LNSTPDDDLRELAEEELESLKKQQEDLEKKIEIALLPKDPNDEKNVILEIRQGAGGDEAS 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+  +KTE L +H  E+ GIK    LIKG  AY  LK E GVHR+ 
Sbjct: 129 LFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + ++IEI   + +I+T RA GAGGQHVNTTDSAVR
Sbjct: 189 RVPETESSGRIHTSTVTVAVLPEA-EEVDIEIKPEELKIETMRAGGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           ITHIPTG+VV CQ ERSQ +NK +A  +LRA+L +  E  ++E+IA   +          
Sbjct: 248 ITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYYERLEKEKIAKERKEQVGTGERSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N      +D++DGDLD+ +   +A +
Sbjct: 308 KIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKE 350


>gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|61214584|sp|Q5WUB1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214585|sp|Q5X2V3|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214588|sp|Q5ZT29|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b]
          Length = 362

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
                 ++R   +     +  +  +  + K L +E   L+      +   +   +   L 
Sbjct: 7   LKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKNNLDSLN 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           EL LE DD  +     + +  +K ++E      Q+  +     D  + YLEV AG GG E
Sbjct: 67  EL-LESDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK E G HR
Sbjct: 126 AAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA
Sbjct: 186 VQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGW 308
           +RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+ +E A   +S       
Sbjct: 246 IRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKSLVGTGDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R N+     SD+++G+L   +   
Sbjct: 306 SERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNLSLVIDPL 346


>gi|299769517|ref|YP_003731543.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
 gi|298699605|gb|ADI90170.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
          Length = 362

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 169/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + + +E+E       +     DSN AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIQANKDLLVELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|23100453|ref|NP_693920.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
 gi|32171555|sp|Q8EM60|RF1_OCEIH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22778686|dbj|BAC14954.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
          Length = 356

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 183/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +   R + LN    DP +  +  + +   +E+  L++ +   +E ++   +L D
Sbjct: 1   MLDRLQSLEDRYNKLNEMLSDPEVINDSKKLREYSKEQSGLEDVVQAYREYKEVTEQLND 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGG 127
              ++E  L+++   +++     L   K E+E   +   L     D  + ++E+   AGG
Sbjct: 61  AKEMMEDKLDDEMYEMVKAEIAELNGRKEELESSMKILLLPKDPNDDKNVFMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G + Y  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEHQGWKIDVMEASSTGVGGYKEVIFMINGSDVYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++       + D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEEVEVEV-HDKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q E+SQ KNK +A  +LRA++Y+    ++E  A   E+ K+ +G
Sbjct: 240 SAVRLTHVPTGIVVSIQDEKSQIKNKEKAMKVLRARIYD--KFQQEAQAEYDENRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++ G LD+F+ A +  ++
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQIMQGKLDEFIDALVMEEQ 347


>gi|167464538|ref|ZP_02329627.1| peptide chain release factor 1 [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 357

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 185/346 (53%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   L+    DP +  +  + +   +E+  L  A     E +    +L  
Sbjct: 2   MLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLEA 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGG 127
              + +  L+++   +++   + L   K E+E   +   L     D+ +  +EV   AGG
Sbjct: 62  AKAMQKEKLDDEMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE L+ +  +  G K  T +IKG  AY  LK E G 
Sbjct: 122 DEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYESGA 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P + + I+IEI +SD R+DT+ +SGAGGQ VNTT 
Sbjct: 182 HRVQRIPVTESGGRIHTSTSTVAVMPEM-EDIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V  CQ  +SQ+ NKA+A  +LRA++Y+    ++EE A      K+++G
Sbjct: 241 SAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD--QVRQEEEAKYAGERKSKVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R  +       +L GDL++ + A 
Sbjct: 299 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITAL 343


>gi|255323257|ref|ZP_05364392.1| peptide chain release factor 1 [Campylobacter showae RM3277]
 gi|255299780|gb|EET79062.1| peptide chain release factor 1 [Campylobacter showae RM3277]
          Length = 355

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 123/341 (36%), Positives = 181/341 (53%), Gaps = 15/341 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   L+    DP +  ++     L +E+ +L++  S  K     L D      L    
Sbjct: 10  LDRYDELSRLLSDPSITNDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALL--- 66

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   D L+ ++ + E  + E     L     D  + +LE+ AG GG E+  +A 
Sbjct: 67  DDAELGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L   YTR+AE R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+  
Sbjct: 127 DLFNAYTRYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPE 186

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ + P V+DS EIEI+ +D RID  R+SG GGQ VNTTDSAVRITHI
Sbjct: 187 TESQGRVHTSAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHI 245

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QI 312
           PTG+VV  Q  +SQHKNK  A  +L+A+LYE++  + E +A      K+++G G    +I
Sbjct: 246 PTGIVVTNQDGKSQHKNKEAAMKVLKARLYEIQ--EEERLAKETSERKSQVGTGDRSGRI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           R+Y   P   + D R N+       ++   L D+ ++  +A
Sbjct: 304 RTYNF-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIA 343


>gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895116|gb|EFG74834.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 357

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 174/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   ++  ++++    D     EL
Sbjct: 8   IDVLLAEHAELEQRLADPDLHSNPAEARKAGRRFARLAPIVATYRKLESARGDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A    D     +    L     E++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  AA---DDESFADEVTELAARVAELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR
Sbjct: 125 ADLARMYIRYAERHGWNVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  E+ I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVHIDESDLRIDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +  
Sbjct: 245 VRITHLPTGIVVTCQNERSQLQNKARALQVLAARLQAMAEEQALADASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 305 SERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDAMFDALGAADK 350


>gi|262279542|ref|ZP_06057327.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259893|gb|EEY78626.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 362

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 168/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + +  E+E       +     DSN AYLE+ AG GG E+ 
Sbjct: 66  ELMKSDPDFKDMAEEEIQANKALLGELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|317061399|ref|ZP_07925884.1| peptide chain release factor 2 [Fusobacterium sp. D12]
 gi|313687075|gb|EFS23910.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 331

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 155/330 (46%), Positives = 217/330 (65%), Gaps = 1/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  +T +   W +   +  L++        ++  + + + +     +L   +E  D S  
Sbjct: 1   MEARTMEEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIE-EEEVLIEFVEAGDESSQ 59

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  +  +++  ++E      LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW 
Sbjct: 60  VELEEKHKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWC 119

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             +K+K E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTS
Sbjct: 120 HDKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTS 179

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P VD+S+E+E+  +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV CQ+
Sbjct: 180 FASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGIVVTCQK 239

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  ML++KL ELEL+K+EE     +  ++EIGWG QIRSYV QPY MVKD
Sbjct: 240 ERSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQPYTMVKD 299

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            RT +E  +   V+DGDLD+FM   L   K
Sbjct: 300 HRTGVEVGNIKAVMDGDLDEFMNGYLRWNK 329


>gi|297192053|ref|ZP_06909451.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719497|gb|EDY63405.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 359

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 173/347 (49%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 5   VEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRAWKRTGEDIGTAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  D  +  +   E  +   +    +D  D  LEV AGAGG ES  +A 
Sbjct: 65  AQ--DDPDFAAEVKDLEKEREALTEKLRLLLVPRDPSDDKDVILEVKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + I++EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEIDVEIHANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+  
Sbjct: 242 TDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 347


>gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor
           Methylation By Prmc
          Length = 360

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +++ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
 gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 288

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 136/280 (48%), Positives = 195/280 (69%), Gaps = 1/280 (0%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   EDD ++L E    L++++ E++  + + LLSG  D+  A L ++AGAGGT++QDW
Sbjct: 2   ELLELEDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQDW 61

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRW+EK+ +K    EI +G+EAG+KS TL I+G  AYG+LK E+G HRLVRI
Sbjct: 62  AEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVRI 121

Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           SP+++N +R TSF+ + V P++ +++I ++I + D  I T RA G GGQ+VN  ++AVRI
Sbjct: 122 SPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRI 181

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG QI
Sbjct: 182 VHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQI 241

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+YV  PYQ+VKDLRTN+E T    V+DG+L DF++A L 
Sbjct: 242 RNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLR 281


>gi|298373047|ref|ZP_06983037.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275951|gb|EFI17502.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 360

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 7/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +   ++T   DP +  +      L +E   L+  I    E    L +     +L
Sbjct: 9   LDGLSSKFDEISTLITDPAIIADTKRFVKLNKEYADLEKIIKKRDEYSLLLKNLQEATDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     +  +   +E   ++ + LL  +   D  +A +E+  G GG E+ 
Sbjct: 69  LATEKDEELREMARQEIDAVTPRIEPLEEEIKLLLVPADPQDGKNAIVEIRGGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E R +KTE     +G   G K     + G N YG LK E GVHR+ 
Sbjct: 129 IFAGDLFKMYARYCESRGWKTEVTSFTEGTMGGYKEIIFSVSGDNVYGTLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   +  +IEI ESD R D + ASG GGQ VNTT SA+R
Sbjct: 189 RVPATESQGRVHTSAATVAVLPEA-EEFDIEIKESDIRTDIFCASGHGGQSVNTTYSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           + HIPTG+ VQCQ E+SQ KNKA+A   LR ++Y +E QK  ++IA+  ++  +      
Sbjct: 248 LVHIPTGITVQCQDEKSQLKNKAKAMTELRTRIYNIEYQKYIDDIASKRKTMVSSGDRSA 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   + D R N    +    + GD+ + + 
Sbjct: 308 KIRTYNY-PQGRITDHRINYTAYNLPAFVGGDIQECID 344


>gi|73662075|ref|YP_300856.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|119361617|sp|Q49Z65|RF1_STAS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72494590|dbj|BAE17911.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 358

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  N    +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNNPDNLRKYSKEQAELQKTVDVYRDYKQTKEDISE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  +  D   ++   +  Q ++ +V    E  +F  +     D  D  +E+ A AGG
Sbjct: 61  VEEMLRDTKDNDEIEMLKEEHQTLQNKVPKLEEELKFLLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE   +KT+ +E+ + +  G K  +  + G  A+  LK E G 
Sbjct: 121 DEAAIFAGDLFRMYSKYAETLNYKTDIVEVTESDHGGYKEISFSVSGNGAFSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIE+   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG V+    E+SQ +N+ +A  +L+A+L++++L  +EE        K+ +G
Sbjct: 240 SAVRITHIPTG-VIATSSEKSQIQNREKALKVLKARLFDMKL--QEEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLAEQ 346


>gi|257066246|ref|YP_003152502.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
 gi|256798126|gb|ACV28781.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
          Length = 358

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 187/345 (54%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  K  DP +  ++ +   + RE   L   +    EI+D         EL
Sbjct: 5   IEHIKENYLDLEKKMIDPDVLADISKLTKITREYNSLKPIVEKYDEIKDSESTIAENKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E DD  +++   D ++  +  +E    + + LL      DS D  +E+  GAGG E+ 
Sbjct: 65  IGEADDQDMVEMLKDEIKENEKLLEKYKEEMKILLIPKDPNDSRDVIVEIRPGAGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K  +KTE +E+      GIK AT +I+G  AY   K E GVHR+ 
Sbjct: 125 LFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKEATFMIRGEGAYSRFKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V D +++E+  +D R D +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEV-DEVDVELDPNDIRTDVFRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q E+SQ KNK +A  +L A++YELE +KR +EIA+  +S         
Sbjct: 244 LTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKEIADNRKSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N       D L+G++ + + + +A  +
Sbjct: 304 RIRTYNF-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIAEDQ 347


>gi|148981822|ref|ZP_01816539.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
 gi|145960730|gb|EDK26070.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
          Length = 248

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 191/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGEHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ S
Sbjct: 61  GATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDTKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|194099102|ref|YP_002002187.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|239999408|ref|ZP_04719332.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|240014585|ref|ZP_04721498.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI18]
 gi|240081334|ref|ZP_04725877.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|240113543|ref|ZP_04728033.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|240116107|ref|ZP_04730169.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|240121107|ref|ZP_04734069.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID24-1]
 gi|240123936|ref|ZP_04736892.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|240126136|ref|ZP_04739022.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|240128613|ref|ZP_04741274.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494127|ref|ZP_05107298.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|260440083|ref|ZP_05793899.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|268595228|ref|ZP_06129395.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268597436|ref|ZP_06131603.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268599608|ref|ZP_06133775.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268601773|ref|ZP_06135940.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268682561|ref|ZP_06149423.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268684722|ref|ZP_06151584.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268687001|ref|ZP_06153863.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291043371|ref|ZP_06569094.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|238690206|sp|B4RN52|RF1_NEIG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193934392|gb|ACF30216.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|226513167|gb|EEH62512.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|268548617|gb|EEZ44035.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268551224|gb|EEZ46243.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268583739|gb|EEZ48415.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268585904|gb|EEZ50580.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268622845|gb|EEZ55245.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268625006|gb|EEZ57406.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268627285|gb|EEZ59685.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291012977|gb|EFE04960.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|317164656|gb|ADV08197.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 358

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D R DT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREVQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|225027777|ref|ZP_03716969.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
 gi|224954923|gb|EEG36132.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
          Length = 359

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 191/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V+RL  +  +  +P +  +    + LM+E+  L   +   KE ++       
Sbjct: 1   MFDKLEDLVKRLDEVMQELSEPDVVSDQNRFRNLMKEQNELAPIVEKYKEYKEAKQTIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            +E+  EE D  + +   + L   K  VE  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SVEMLEEEHDEEMRELLKEELSEAKKNVEQYEEELKVLLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE +++KTE +++++    G K  + +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYKNYAESKRWKTEFIDVNENGIGGFKEVSFMINGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P   + +++++  +DCR D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEA-EEVDVQLDMNDCRFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LRA+LY+LE  K  +  A + +S     
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKAIKVLRARLYDLEQSKAHDAEAELRKSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +      D+L+GDLD+ + +  A  +
Sbjct: 300 DRAEKIRTYNF-PQGRVTDHRIKLTLHRLDDILNGDLDEIIDSLTAADQ 347


>gi|328472050|gb|EGF42927.1| peptide chain release factor 2 [Vibrio parahaemolyticus 10329]
          Length = 248

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I I+I+ +
Sbjct: 61  SATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
 gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
          Length = 354

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +     L TK  DP +  +   A+ L +    L   +   +E++    D     EL
Sbjct: 5   LDALIAEHGELETKLADPSVHADQAGARKLGKRYAELTPIVRAARELEQTRNDLGAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D +  +E  +   RI    E      L     DS+D  +E+ +G GG ES  +A 
Sbjct: 65  AGE--DPAFAEEADELSARIPQLEERLTELLLPRDPHDSSDVVMEIKSGEGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            LLRMY R+AE++ +K E L+  D +  G K  T+ IK         +  LK E GVHR+
Sbjct: 123 DLLRMYLRYAERQGWKAEVLDGTDSDLGGFKDVTVAIKSRGDGPDGVWSRLKYEGGVHRV 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V P  +D   IEI + D R+D +R+SG GGQ VNTTDSAV
Sbjct: 183 QRVPVTESQGRIHTSAAGVLVIPETEDVASIEIDDKDLRVDVFRSSGKGGQSVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L+A+L  L E + ++E ++   +    +   
Sbjct: 243 RITHLPTGIVVSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVRTVDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   + D R   +  +   VLDG+LD  + A  A  +
Sbjct: 303 ERVRTYNF-PESRISDHRVGYKAHNLDAVLDGELDAVLDALSAADR 347


>gi|329119839|ref|ZP_08248513.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327463995|gb|EGF10306.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 362

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 178/346 (51%), Gaps = 8/346 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D   N   RL  +      P    ++   + L +E   L   +   +       D  
Sbjct: 8   SILDKLQNLAHRLEEVTALLGSPEAVADMDNYRRLNQEHAELTPVVETYRAYTRAQSDLA 67

Query: 71  ILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + D      E ++  +  I       Q   L     D  + ++E+ AG GG E
Sbjct: 68  DAQEMLSDPDMKDFAAEETEAAKAKIDALDLELQKLLLPKDADDDKNIFIEIRAGTGGDE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ +  G K   + + G  AY  LK E G HR
Sbjct: 128 AALFAGDLLRMYSRYAERNRWQVEIVSANESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 188 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G
Sbjct: 248 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSG 305

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+       V+DGD+++   A +A
Sbjct: 306 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAALIA 350


>gi|295094043|emb|CBK83134.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus sp.
           ART55/1]
          Length = 358

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 118/349 (33%), Positives = 197/349 (56%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCD 68
           +FD  +  V +L  +N +  DP +  +  + + LM+E+  L   +    E +D    + D
Sbjct: 1   MFDRLEELVDKLDTINNQLTDPDVVSDQNKFRKLMKEQSDLSPIVEKYHEYKDAKTTIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L +LE   +E+   + +E  +  +  ++   +  +   L     DS +  +E+ AGAGG
Sbjct: 61  SLEILEEESDEELREMAKEEMNEAKANLETIEQELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E GV
Sbjct: 121 DEAALFAYEVYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P   + +++EI+E+D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPKTESGGRIHTSTITVAVMPEA-EEVDVEINENDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +       S+   G
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRRSQIGTG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GDL++ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQ 347


>gi|259046347|ref|ZP_05736748.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
 gi|259036984|gb|EEW38239.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
          Length = 359

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 171/347 (49%), Gaps = 12/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L+    DP +  +      L +E  +L   +   K  Q  + +   
Sbjct: 1   MFDQLDSFIIRYDELSELLSDPEVIGDTKRFMELTKEEANLRPKVETFKRYQQVVEEISD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  + +   + L  +K E    +    F  L     D  +  +E+   AGG
Sbjct: 61  TEEMLGESLDAEMAEMAKEELSSLKKEKVELEDKIKFLLLPEDPNDGKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LL MY ++AE + ++ E ++ +     G K   L+I G N +  LK E G 
Sbjct: 121 DEAALFAGDLLTMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++       + D R+D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAEEVEIEL-EDKDIRVDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+     +E  +    + K+ +G
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--KISQEAQSEYDANRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VL G +D+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343


>gi|149192200|ref|ZP_01870417.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
 gi|148833958|gb|EDL50978.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
          Length = 248

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW NM+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTNMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+I+I+I+ S
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|323491501|ref|ZP_08096683.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
 gi|323314255|gb|EGA67337.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
          Length = 248

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ +
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
 gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
          Length = 357

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 169/348 (48%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            DN + R   +     DP +  +      L RE   ++          ++Q +L DNL L
Sbjct: 5   LDNILHRREEIAVMLADPDVTSDNKRYTALSREFSEIEPVAEEAQHYLDLQQQLADNLEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  A  + D  + +      + IK  +           L     D+ D  LE+ AG GG 
Sbjct: 65  I--ADPDCDAELKEMAEAEAREIKQAISASDAALSMLLLPKDPNDNRDVILEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE + +K E L   D    G K     I G   +   K E G H
Sbjct: 123 EAALFAADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESGAH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + PV  + ++I I   D RID YRASGAGGQHVN T+S
Sbjct: 183 RVQRVPETESGGRIHTSACTVAILPVA-EEVDINIRPEDLRIDVYRASGAGGQHVNKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITHIP+G+VV CQ + SQHKNKAQA  +L+A+L++ E  + +   +         G 
Sbjct: 242 AVRITHIPSGLVVTCQDQASQHKNKAQAMKVLQARLFDKEQSELDAERSQARKGMVGSGD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +       +L GD+ + + A +   +
Sbjct: 302 RSERIRTYNY-PQGRITDHRIGLTLYKLEQILGGDMGELLDALITYHQ 348


>gi|153854177|ref|ZP_01995485.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
 gi|149753226|gb|EDM63157.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
          Length = 358

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 191/349 (54%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  ++   RL  +  + ++P +  +    + LM+E+  L   +    E +     + D
Sbjct: 1   MFDKLEDLRIRLDEILNELQEPDVANDQNRFRKLMKEQNDLTPIVEAYNEYKECKQAIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L +LE   +E+   + +E  ++ ++   E+E   +   L     D  +  +E+ AGAGG
Sbjct: 61  SLEMLEEESDEEMRELAKEELNDNKKRVEELEQELKILLLPKDPNDEKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE +++K E +E  +    G+K+ T +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYMHYAESQRWKVELVECEEIGIGGMKNVTFMIDGKGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++I+I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EDVDIQIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY+LE QKR +  A   +S     
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKDKAFALLRAKLYDLECQKRHDAEAEARKSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + + A +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|313891751|ref|ZP_07825356.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
 gi|313119745|gb|EFR42932.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
          Length = 359

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L  K  DP + +N  + +   +E   L   ++  ++ +         LE+
Sbjct: 6   LQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVFETKNAALEI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +++   + +   ++L+  + E+E  + +     +     DS +  LE+ AG GG E+ 
Sbjct: 66  LNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LL+MY ++AE RK++   +++++ +  G +     I G NAY  LK E GVHR+ 
Sbjct: 126 LFVADLLKMYLKFAEHRKWRCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S+ R HTS  ++ V P   + ++IEIS+ D R+D YRASGAGGQH+N T SA+R
Sbjct: 186 RIPETESSGRVHTSAVTVAVLPEA-EDVDIEISKEDIRVDVYRASGAGGQHINKTSSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG+VV CQ ER Q +N+ +A  +L+A+LY+  L+K + E A   +          
Sbjct: 245 ITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRKTKSETAQNRKEQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R  +        ++G ++  +   +
Sbjct: 305 RIRTYNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLI 344


>gi|268610024|ref|ZP_06143751.1| peptide chain release factor 1 [Ruminococcus flavefaciens FD-1]
          Length = 357

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 182/348 (52%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 + + ++ K   P +  +      LM+E +++   I   +E +     N    EL
Sbjct: 5   LAAMETKYNEISDKLSQPDIVSDNKLYTQLMKEYKNMTPIIEKYREYKSAQAQNEEAKEL 64

Query: 76  ----ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
                L+ D   ++Q   +  +     V +  +   L     D  +  +E+  GAGG E+
Sbjct: 65  LDGGGLDRDFKEMVQAELEESKEAMENVTQELKILLLPKDPNDDKNVIIEIRGGAGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +AN L RMYT +AE R +K E L  +  E  G K  +  I+G  AY  LK E GVHR+
Sbjct: 125 SLFANSLYRMYTMYAEARGWKQEVLSANPTELGGFKEISFSIEGEGAYSRLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V     D +E+EI+ +D +ID +RASGAGGQH+N T+SAV
Sbjct: 185 QRVPETESQGRIHTSTVTVAVLVEA-DDVELEINPTDLKIDYFRASGAGGQHINKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RIT++PT VVV+CQ ERSQHKNK +A  +LR+++Y  E  ++E+   I    ++++G G 
Sbjct: 244 RITYLPTNVVVECQDERSQHKNKDKAMKILRSRIY--EAMQQEQNDKIASERRSQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +      D+L+G+LD+   +     +
Sbjct: 302 RSERIRTYNY-PQGRLTDHRIGLTIYRLEDILNGNLDEVFDSLATADQ 348


>gi|328885059|emb|CCA58298.1| Peptide chain release factor 1 [Streptomyces venezuelae ATCC 10712]
          Length = 358

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 172/347 (49%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     EL
Sbjct: 5   VEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRAWKQTGDDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E     +      E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AH--DDPDFAAEVKQLEKDRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESAGRIHTSAAGVLVTPEA-EEVEVEIHANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+  
Sbjct: 242 TDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAMIQACV 347


>gi|126653461|ref|ZP_01725557.1| peptide chain release factor 1 [Bacillus sp. B14905]
 gi|126589817|gb|EAZ83950.1| peptide chain release factor 1 [Bacillus sp. B14905]
          Length = 358

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 178/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   AV+ R   L     DP +  +  + +   +E+  +   +   +E ++     + 
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDSYREYKNVKEQLVD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   +    +K + E  +     LL      D+ +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P V + +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEV-EEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ +  +  +E    I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVAD--MYMQEAQKEIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ +   +  ++
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQ 347


>gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87]
 gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87]
          Length = 358

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   +    +    +K E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEEMLKETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G+LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQ 346


>gi|323497777|ref|ZP_08102791.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
 gi|323317124|gb|EGA70121.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
          Length = 248

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|264676913|ref|YP_003276819.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
 gi|262207425|gb|ACY31523.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
          Length = 359

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 176/339 (51%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +    S          D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEADIAAAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE   + +   +++E +    LL     D+  A++E+ AG GG ES  +A
Sbjct: 69  LDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A    +K E +   + E  G K   L I+G N YG L+ E G HR+ R+ 
Sbjct: 129 GDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       V++GDL D ++A 
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGDVIQAL 344


>gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
          Length = 358

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + ++  E  D   ++   +    +K E+    E  +   +     D  D  +E+ A AGG
Sbjct: 61  IEDMLSETSDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     + +++G LD+ ++A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGHLDEIVEALTLSEQ 346


>gi|239928894|ref|ZP_04685847.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291437221|ref|ZP_06576611.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291340116|gb|EFE67072.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
          Length = 355

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 176/344 (51%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     EL
Sbjct: 5   VEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWRQTGDDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +  Q+ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVRELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+  +KTE ++  + E  G K   + +K       G   +  LK E GVH
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQVEPGQGVWARLKYEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VNTTDS
Sbjct: 183 RVQRVPATESQGRIHTSAAGVLVTPEA-EEVDVEINPNDLRIDVYRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L  +  ++ E  A     S+   + 
Sbjct: 242 AVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAMAQEEAEREAADARRSQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R   +  +   VLDGDL   ++A +
Sbjct: 302 RSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLGAVIQACV 344


>gi|226946181|ref|YP_002801254.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
 gi|259585215|sp|C1DEV0|RF1_AZOVD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226721108|gb|ACO80279.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
          Length = 360

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +       +   +E   ++  ++  +E +    D      L
Sbjct: 9   LDLLHDRYEELTALLGDAEVIAEQGRFRAYSKEYAEVEPVVAAYREFRKVRDDLAGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +  ++ +   +  +    +  Q   L     D+ + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDLREMAAEEVAEARERLAGLEDRLQRMLLPRDPNDARNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E L  + GE  G K     ++G N YG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEKQGWRIEILSENPGEHGGYKEIITRVEGDNVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   IEI+ ++ R+DTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAIEINPAELRVDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ+ERSQHKN+A+A   L AKL + +         I E+ +  +G G  
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQ--DAAAHREISETRRLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V + R N+   +  +V+ G ++  ++  L+
Sbjct: 306 SERIRTYNF-PQGRVTEHRINLTLYALDEVMAGGVEAVIEPLLS 348


>gi|258544629|ref|ZP_05704863.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
 gi|258520137|gb|EEV88996.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
          Length = 360

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 119/340 (35%), Positives = 181/340 (53%), Gaps = 9/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  +R   LN     P    +  + +   +E   L   I+ + + +        L +L
Sbjct: 9   LASLRERYDELNGLLALPETAADPDQLRRYAQEHAQLAPVIAILDDTEALE---RQLADL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  E D  + +  +     ++ ++   + +     +     D  D YLE+ AG GG E+ 
Sbjct: 66  ADLETDPEMAELAAAERPALEAQIAANEHQLARHMIPKDPLDGADIYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++AE++ +K E L  + GE  G K     I G N Y  LK E G HR+ 
Sbjct: 126 IFAGDLFRMYGKYAEQKNWKIEILSENPGEHGGYKEIISQISGNNVYSTLKYESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + PV DD   IEI+ +D ++DTYRASGAGGQHVN TDSA+R
Sbjct: 186 RVPETESGGRIHTSAATVAILPVGDDIQPIEINPADLKVDTYRASGAGGQHVNKTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+P+G+VV+CQ+ERSQHKN+A+A  +L A+L ++E  K + E A   +S         
Sbjct: 246 ITHLPSGIVVECQEERSQHKNRAKAMRLLAARLLDVERTKAQNEQAAERKSLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+   S +D+L+G LD  +   
Sbjct: 306 RIRTYNY-PQSRVTDHRINLTLYSLADILEGGLDAIITPL 344


>gi|332342793|gb|AEE56127.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88]
          Length = 360

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I  +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDIKPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|290957365|ref|YP_003488547.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
 gi|260646891|emb|CBG69988.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
          Length = 358

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 175/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   +   +  +    D     E 
Sbjct: 5   VEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRTWKQTGDDIDTAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD   + E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFIAEVKELEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEVDVEINANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+  
Sbjct: 242 TDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLDGELDAVIQACV 347


>gi|317133626|ref|YP_004092940.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
 gi|315471605|gb|ADU28209.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
          Length = 356

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 185/347 (53%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R + +  +   P    +      LMRE + L   +      Q    D +   EL
Sbjct: 5   LEDTCSRYTEIAARLSQPDALADRAAYAKLMREHKQLTPLVEAYHAYQQATADEMEAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE  D  +    ++ L   + E E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  -LENGDADLRALAAEELADARAEKERLEQKLHLLLLPRDPNDEKNVIIEIRAGAGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+ +AE+R +K E L +++ E  G+K  + +++G  AY  LK E GVHR+ 
Sbjct: 124 LFAAELFRMYSMYAERRGWKAETLNMNETELGGMKEISCMVEGEGAYSRLKFESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +E++I+  D RIDT+R+SGAGGQH+N T+SA+R
Sbjct: 184 RVPETEAGGRIHTSTVTVAVLPEA-EDVEVDIAPEDLRIDTFRSSGAGGQHINKTESAIR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ ERSQHKN+ +A  +LR++L +     ++E   I  + +T++G G  
Sbjct: 243 ITHLPTGLVVECQDERSQHKNRDRAMKVLRSRLLDRAQSAQDE--EIATTRRTQVGTGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL G+LD+ +   +   +
Sbjct: 301 SERIRTYNF-PQGRVTDHRIGLTLYHLDAVLSGNLDEVIDPLITADQ 346


>gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
 gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
          Length = 358

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 174/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L  K  DP +     E     +    L   ++  +E +  +        +
Sbjct: 8   LQDLEDRYLDLEAKISDPEVIARQEEWLKYTKAHAKLTEIVTVYREYKKLVDTWKDDEAI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  +     + +Q ++  +E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 68  VKAREDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRDPNDEKNIIMEIRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ +K E ++       G K    ++ G + Y  +K E GVHR+ 
Sbjct: 128 LFAGDLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVFMVSGTDVYSHMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + ++IE++ +D R+DTYRA GAGGQ+VN T+SAVR
Sbjct: 188 RVPDTESQGRVHTSTVTVAVMPEAQE-VDIELNPADIRVDTYRAGGAGGQYVNKTESAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           +THIPTG+V QCQ E+SQ KN+ +   +LR+++ E E +K+    A   +S         
Sbjct: 247 MTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEKQRAATAAERKSQVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +      D+++GDLD+ + A +  ++
Sbjct: 307 RIRTYNY-PQGRVTDHRIGLTLHKLPDIINGDLDELLDALMMAEQ 350


>gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21]
 gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21]
          Length = 359

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 12/331 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP +  N  E + L +E   L   ++  +E +  L D     EL  E  D  + +  
Sbjct: 20  LLSDPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKE-PDQEMREMA 78

Query: 89  SDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
              L  ++   E  +       L     D  +  LE+ AG GG ES  +A  L RMY+R+
Sbjct: 79  QAELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRF 138

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE  +++ E +   + E+ G K    L++G   +  LK E G HR+ R+   ++  R HT
Sbjct: 139 AETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHT 198

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ V P   + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ
Sbjct: 199 SACTVAVMPEA-EDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQ 257

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
           +ERSQ KN+A+A  +L++++ +  L   E+ A +    K+++G G    +IR+Y   P  
Sbjct: 258 EERSQIKNRAKAMKVLKSRILDNILM--EQNAKLAADRKSQVGSGDRSERIRTYNF-PQG 314

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            + D R  +       ++ GD+ +   +  A
Sbjct: 315 RMTDHRIGLTLYRLDAIMAGDIAEIADSLRA 345


>gi|291550093|emb|CBL26355.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           torques L2-14]
          Length = 356

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  + ++P +  +    + LM+E+  L   +   +E +    +   
Sbjct: 1   MFDRLEDLVIRYQEVMGELQEPDVANDPERFRKLMKEQSDLAPIVEAYQEYKKCKQNVEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLMILEEESDEEMRELAKEELNESKARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K++   A    S     
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKKQASEAAERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347


>gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1]
 gi|166223563|sp|A1WVQ8|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira
           halophila SL1]
          Length = 363

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 179/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +  +  DP +  +  +   L RE   L+  +  +   +    D +   E 
Sbjct: 9   LERMAERHEEIGAQLADPDVVGDPSKFAELSREYARLEPVVQDLNAYRAE-ADTVASAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L + D  I       L   +  +E  +       + +   D  + +LEV AGAGG E+ 
Sbjct: 68  MLNDGDAEIRALAEQELAEAQRRLEELEGALQRHLVPTDPNDQRNIFLEVRAGAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE++ +KTE L   +GE  G +     + G + Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYMRYAERQGWKTEILSAREGEHGGYREVIARVSGRSVYARLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P +D+   IE++ +D R+DT+R+SGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDTFRSSGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+P+G+VV+CQ ERSQ+KN+A+A  +L+A+L E E  K++ E +     +        
Sbjct: 248 ITHLPSGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQQSERSEQRRLAVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R  +       V++G +D+ +   
Sbjct: 308 RIRTYNF-PQGRVTDHRIGLTLYKLEQVMEGGMDELLDGL 346


>gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
 gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
          Length = 360

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +     DP    +    + L RE   ++  ++   E +  L +      L
Sbjct: 9   LDLLQERYVEVGALLSDPGTIADQNRFRELSREYAEIEPVVNCYNEYRKILDNLEEAQVL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +     + L+  + E        Q   L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMRAMGQEELKSAEEERAPLELELQKLLLPKDPNDDKNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AEKR+++ E +     E+ G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSKYAEKRRWQVEIVSESRSEQGGYKEVIARIVGQGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  D   E+ I+++D R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRVHTSACTVAIMPEADAQAEVAINKADLRVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGR 310
           +THIPTGVVV+CQ ERSQHKN+A+A ++L A+L   +     +E+A+  ++         
Sbjct: 248 LTHIPTGVVVECQDERSQHKNRARAMSLLAARLQSAQDDVAAKEMADERKNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+     ++V++GDLDD ++  +
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYRLNEVMEGDLDDVVQPLV 347


>gi|332885310|gb|EGK05561.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836]
          Length = 361

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 172/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   +     DP +  ++     L +E + L+      +E +  L        +
Sbjct: 10  LDALNIRFEEIGKLITDPAVIADMKRYVKLNKEYRDLEKIDIARREYKQLLATIEEAKGI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              EDD  + +   + +      +    E  +F  + +   DS +A +E+  G GG E+ 
Sbjct: 70  LENEDDSELREIAKEEMDAANERMPKLEEEIKFLLVPADPQDSKNAIMEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +KTE   + +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 IFAGDLYRMYQKYCEIKGWKTEITSVTEGTSGGFKEIIFTVTGEGVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++++I+ +D  + T R+SGAGGQ+VN  ++ V+
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEA-EEVDVDINPADIEMQTARSSGAGGQNVNKVETKVQ 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           +TH P+G+VV CQQ RSQ  N+  A  MLR KLY++EL K  + IA+  ++  +      
Sbjct: 249 LTHKPSGLVVVCQQSRSQLANRELAMQMLRTKLYDIELSKYMDAIASKRKTMVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N+   + S V+DG++   +   +  +
Sbjct: 309 KIRTYNY-PQGRMTDHRINLTMYNLSAVMDGEIQPIIDQLIIAE 351


>gi|229545076|ref|ZP_04433801.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|307287617|ref|ZP_07567660.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|229309968|gb|EEN75955.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|306501355|gb|EFM70658.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|315165014|gb|EFU09031.1| peptide chain release factor 1 [Enterococcus faecalis TX1302]
          Length = 357

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +    +   +  +  +       EL
Sbjct: 5   LQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E E  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E LE +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKVEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIE+++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--QIQQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|198284467|ref|YP_002220788.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665453|ref|YP_002427134.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248988|gb|ACH84581.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517666|gb|ACK78252.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 365

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 125/359 (34%), Positives = 185/359 (51%), Gaps = 15/359 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M LS +L         +    R   L+     P    +    + L +E   +   +  ++
Sbjct: 1   MSLSPRLQS-----QLEQLAFRFDELSQLLASPGAAGDTQRFQSLSKELGEIGPVLELLR 55

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
             Q R  D      + LEE D  +    S+ +   + E++  +       L     D   
Sbjct: 56  RHQQRQRDRDEGGRMLLEEQDAELRALASEEVAAAEAELDQIEAALRIRLLPKDPNDDRS 115

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            +LE+ AG GG E+  +A +L RMYTR+AE + F    L   D E  G K   L I G  
Sbjct: 116 VFLEIRAGTGGEEAALFAGVLARMYTRYAESKGFGVVILSASDSERGGYKEVVLEISGRG 175

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E G HR+ R+   ++  R HTS  ++ V P VD   EI I+ +D RIDTYRAS
Sbjct: 176 AYSCLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDTVSEITINPADLRIDTYRAS 235

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N TDSA+RITH+P+G+VV CQ++RSQHKN+A+A  +L+A+L E E +K++  A
Sbjct: 236 GAGGQHINKTDSAIRITHVPSGMVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQQSAA 295

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              ++ +  +G G    +IR+Y   P   + D R N+       VL+GDLD  ++  + 
Sbjct: 296 --AQTRRLLVGSGDRSERIRTYNF-PQGRITDHRINLTLYRLEAVLEGDLDAVIEPLIK 351


>gi|256848019|ref|ZP_05553463.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715079|gb|EEU30056.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 362

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 112/355 (31%), Positives = 177/355 (49%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            +  +FD       R   LN    DP +  +      L +E   L   +    + Q    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYHQYQKVTQ 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHA 123
                 EL  +  D  +++ T + L   K E +    + E LL      D  +  +E+  
Sbjct: 62  TIKDDEELLRDTKDDELIEMTKEELASSKEEQDQLAHELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AEK+ +  E ++  + E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAGDLYNMYLHYAEKQGWNVEIVDKTETEVGGFKEIVLMISGDKVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+
Sbjct: 182 ENGAHRVQRIPVTESAGRVHTSTATVGVMPEA-EDVQIDLDPKDIRVDVYRSSGAGGQHI 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+    +++E +   +  K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDY--YQQKEQSAYDQKRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++DGDLD+ ++A +   +
Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMDGDLDEIIEALIIADQ 352


>gi|28378950|ref|NP_785842.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|32171522|sp|Q88UT2|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28271787|emb|CAD64693.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 360

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 176/352 (50%), Gaps = 8/352 (2%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +   FD       R   L     DP +  +      L +E  ++   +      ++    
Sbjct: 1   MDKFFDKLQAVADRYEELGELLSDPEVISDSQRFMKLSKEMGNIRETVEKYNHYKEVTSQ 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAG 124
                EL  E+ D  +     D+L+ +  E +  + E     L     D  +  +E+H  
Sbjct: 61  IEENDELLHEKLDDEMNAMVKDDLKNLNAEKDQLEHEITLLMLPKDPNDDKNIIMEIHGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY+++AE++ ++ E  + ++ E  G K   L+I G   Y  LK E
Sbjct: 121 AGGDEASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDKVYSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   D ++I+I + D R D +R+SGAGGQH+N
Sbjct: 181 SGAHRVQRVPVTESAGRVHTSTATVGVMPEAQD-VDIDIDQKDIRTDVFRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303
            T SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +LRA++Y+  + +++ E     +S+ 
Sbjct: 240 KTSSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDYYQSREQNEYDAERKSAV 299

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                  +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDEVIDALVLADQ 350


>gi|325285304|ref|YP_004261094.1| peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
 gi|324320758|gb|ADY28223.1| Peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
          Length = 358

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 106/337 (31%), Positives = 171/337 (50%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P +  +      L RE + L       +   +   +     E+  +
Sbjct: 8   VKQRFDEVSDLIIQPDIISDQKRYVELNREYKDLKKLCDKRELYLEFTNNIEEANEIIAD 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +++     L+  K  +    E  +   +     DS +  +EV AG GG E+  +A
Sbjct: 68  GSDAEMVEMAKMQLEEAKAGLPPLEEEIKLLLIPKDPEDSKNVVVEVRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + +KT  +++ DG   G K     + G   YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYTKYCESKGWKTNVIDLSDGTSGGYKEIQFEVTGDEVYGTLKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   +  +++I   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVLPEA-EDFDVQIDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIR 313
           +PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +K+EE A    S  +      +IR
Sbjct: 247 VPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYDLELAKKQEEDAAKRNSQVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   V D R  +      ++++GD+   +   
Sbjct: 307 TYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342


>gi|295105440|emb|CBL02984.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 361

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +R   L+ +   P    +    + LMRE    +  +   ++ Q  L        L 
Sbjct: 9   DAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTALDHLAQAKALL 68

Query: 77  LEED--DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            E    D    Q     +     +V   +       L     D  +  +E+ +GAGG E+
Sbjct: 69  EEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIMEIRSGAGGEEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ LLRMYT +A+ R +  E L +++ E  G+K A + + G  AY  LK E GVHR+
Sbjct: 129 ALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGGQH+N T SA+
Sbjct: 189 QRVPETETQGRIHTSTATVAVMPQA-EEVDFALDMKDLRIDTFRSSGAGGQHINKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I    + ++G G 
Sbjct: 248 RVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINAQRQGQVGTGD 305

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P     D R  +   +   ++DG+LD+ + A    ++
Sbjct: 306 RSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQ 352


>gi|156933676|ref|YP_001437592.1| peptide chain release factor 1 [Cronobacter sakazakii ATCC BAA-894]
 gi|166223556|sp|A7MKC1|RF1_ENTS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156531930|gb|ABU76756.1| hypothetical protein ESA_01498 [Cronobacter sakazakii ATCC BAA-894]
          Length = 360

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 112/338 (33%), Positives = 175/338 (51%), Gaps = 3/338 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      E +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARLM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q E  +   + +   +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LSDPEMRDMAQDELLEAKAKSEALEQELQLLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIR 313
           +PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR++  A+   +         + R
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQAEASTRRNLLGSGDRSDRNR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 309 TYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEPII 345


>gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
 gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
          Length = 290

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 132/263 (50%), Positives = 185/263 (70%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ +  ++   + E LLSG  D N+A + ++AGAGGT++QDWA MLLRMYTRWAE+  ++
Sbjct: 24  LKELDTQLNRWELEQLLSGPYDKNNAIVTINAGAGGTDAQDWAEMLLRMYTRWAERHGYQ 83

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           T   E+ +GEEAGIKSATL I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V
Sbjct: 84  THLAELSEGEEAGIKSATLEIRGRYAYGYLRSEKGTHRLVRISPFNANGKRQTSFAGVDV 143

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +D S+ +EI ESD  I T R+ G GGQ+VN  ++AVRI H PTG+ V+C QERSQ +
Sbjct: 144 MPELDQSVTVEIPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAVRCTQERSQLQ 203

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK +A  +L+AKL  +  +++ +          E  WG QIR+YV  PYQ+VKDLRT +E
Sbjct: 204 NKEKALAILKAKLLVIAQEQKAKEIADIRGEAVEAAWGNQIRNYVFHPYQLVKDLRTEVE 263

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
            T+  DV+DG+LD F++A L  +
Sbjct: 264 TTAIQDVMDGNLDPFIQAYLRQQ 286


>gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +        Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTNWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|184154903|ref|YP_001843243.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
 gi|238692951|sp|B2GAT1|RF1_LACF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183226247|dbj|BAG26763.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 109/354 (30%), Positives = 177/354 (50%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +  +FD       R   LN    DP +  +      L +E   L   +    E ++    
Sbjct: 1   MEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQT 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAG 124
                E+  EE D  +++ T + L   K        + E LL      D  +  +E+   
Sbjct: 61  IKDDTEMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK E
Sbjct: 121 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N
Sbjct: 181 NGAHRVQRIPATESAGRVHTSTATVGVMPEA-EDVDVDLDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+    +++E +      K 
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDY--YQQQEQSEYDAQRKN 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +   +
Sbjct: 298 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 350


>gi|205352556|ref|YP_002226357.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690491|sp|B5R924|RF1_SALG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|205272337|emb|CAR37217.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627616|gb|EGE33959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|194736546|ref|YP_002114806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238689756|sp|B4TXU2|RF1_SALSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194712048|gb|ACF91269.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|322616772|gb|EFY13680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620418|gb|EFY17284.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625680|gb|EFY22499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626130|gb|EFY22940.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633737|gb|EFY30477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638891|gb|EFY35584.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640874|gb|EFY37523.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644095|gb|EFY40640.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649166|gb|EFY45604.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655325|gb|EFY51633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660917|gb|EFY57148.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662786|gb|EFY58993.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667970|gb|EFY64129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674268|gb|EFY70362.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678549|gb|EFY74607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683208|gb|EFY79224.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686902|gb|EFY82880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195208|gb|EFZ80388.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200201|gb|EFZ85287.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204529|gb|EFZ89533.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207354|gb|EFZ92302.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213949|gb|EFZ98718.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217339|gb|EGA02058.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219317|gb|EGA03806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323228020|gb|EGA12165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231361|gb|EGA15474.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235801|gb|EGA19880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240370|gb|EGA24413.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245262|gb|EGA29262.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323252824|gb|EGA36660.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323254893|gb|EGA38687.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261018|gb|EGA44613.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266735|gb|EGA50221.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323268942|gb|EGA52398.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|56421913|ref|YP_149231.1| peptide chain release factor 1 [Geobacillus kaustophilus HTA426]
 gi|261420783|ref|YP_003254465.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297531578|ref|YP_003672853.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|319768453|ref|YP_004133954.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
 gi|61214572|sp|Q5KUH3|RF1_GEOKA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56381755|dbj|BAD77663.1| peptide chain release factor 1 (RF-1) in translation [Geobacillus
           kaustophilus HTA426]
 gi|261377240|gb|ACX79983.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297254830|gb|ADI28276.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|317113319|gb|ADU95811.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
          Length = 358

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 188/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  +   QR   LN    DP +  +  + +   +E+  L+  +   +E +   ++L +
Sbjct: 1   MFDRLEAVEQRYEKLNELLMDPDVINDPKKLRDYSKEQADLEETVQTYREYKSVREQLAE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGG 127
              +LE  LE +   +++E    L+  +  +  K    L      D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLEPELREMVKEEIGELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMINGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P + + IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEM-EEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYD--KYQQEARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGHLDEIIEALILDDQ 347


>gi|121603686|ref|YP_981015.1| peptide chain release factor 1 [Polaromonas naphthalenivorans CJ2]
 gi|166223585|sp|A1VKB6|RF1_POLNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120592655|gb|ABM36094.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas
           naphthalenivorans CJ2]
          Length = 373

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 118/353 (33%), Positives = 178/353 (50%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + RL  L+       +  ++   + L RE             +  R  D      +
Sbjct: 9   LDRQLLRLHELDALLSASDVVSDLDRFRALTREHAEASVVAEQYNRLTAREADLASAESM 68

Query: 76  ALEE-DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +D  + +   + +   K ++    E  Q   +     D   A++E+ AG GG ES
Sbjct: 69  LAEAKNDPDMAEMAEEEINAAKTDIAQLDEALQLMLIPKDPDDRRAAFIEIRAGTGGDES 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP------NAYGWLKGE 184
             +A  L R+YTR+AE+++++ E +     E  G K   L I GP        YG L+ E
Sbjct: 129 ALFAGDLFRLYTRFAERKRWQVEIISESPSELGGYKEVVLRIDGPTDAMGVGVYGKLRFE 188

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   ++  R HTS  ++ V P  D+++ I+I+ +D RIDTYRASGAGGQH+N
Sbjct: 189 SGGHRVQRVPATETQGRIHTSACTVAVLPEPDETVAIQINPADLRIDTYRASGAGGQHIN 248

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRITH+PTG+V +CQ+ RSQH NKAQA  +L A+++E E     + A      K 
Sbjct: 249 KTDSAVRITHLPTGIVAECQEGRSQHGNKAQAMKVLTARIHEKERS--AQAAKDAAMRKG 306

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            IG G    +IR+Y   P   + D R N+       +++GDLDD + A    +
Sbjct: 307 LIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDLDDVVTALQVAR 358


>gi|327253901|gb|EGE65530.1| peptide chain release factor 1 [Escherichia coli STEC_7v]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|239628684|ref|ZP_04671715.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518830|gb|EEQ58696.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 357

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 183/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L     DP + Q+      LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDRLDDMLIHYEELMLMLGDPAVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L L  EE+D  + +   + L   K  +E  + E     L     D  +  LE+ AGAGG
Sbjct: 61  SLALLEEENDEEMREMAKEELSDAKKRIEELEHELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+ +A+  ++K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYSNYADSHRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I  +D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEA-EEVDVQIDMNDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+   A    S     
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347


>gi|266622716|ref|ZP_06115651.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865539|gb|EFC97837.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 275

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 129/266 (48%), Positives = 193/266 (72%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W++  ++  +++  ++L + ++  K+++ +  D  +++E+  EE+D S++ E  
Sbjct: 1   MEEPGFWEDPEKSTKIVQLAKNLKDTVNGYKDLEQQYEDIGVMIEMGNEENDPSVVPEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+  K ++E  +  +LLSGE DS++A L ++AGAGGTES DW +ML RMY RWAEK+ 
Sbjct: 61  EMLKEFKDKLEEIRINTLLSGEYDSDNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+  DGEEAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YSVEVLDYLDGEEAGIKSVTIQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++++I+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDVDINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEI 295
            +NK +A  ML+AKLY L+ Q+  E 
Sbjct: 241 FQNKDKAMQMLKAKLYMLKQQENAEK 266


>gi|313147825|ref|ZP_07810018.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
 gi|313136592|gb|EFR53952.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
          Length = 337

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 130/332 (39%), Positives = 198/332 (59%), Gaps = 11/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +  +A+  M+  + L   I    E++    +  +  +   +E      QE 
Sbjct: 2   RTQAPGFWDDQKKAEAQMKLVKGLQKWIDGYNEVKTLADELELAFDFYKDE--LVTEQEV 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 60  DEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETN 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 120 GYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260
           ++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++
Sbjct: 180 VFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEIL 239

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ++  + R Q KN+  A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    
Sbjct: 240 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD- 298

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + VKD RTN + +  + V+DG ++ F+KA L 
Sbjct: 299 RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYLM 330


>gi|167766740|ref|ZP_02438793.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
 gi|167711494|gb|EDS22073.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
          Length = 366

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 123/361 (34%), Positives = 191/361 (52%), Gaps = 11/361 (3%)

Query: 1   MKLSRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           M L  + N    +FD  +  V RL  +  +  DP +  N    + LM+E+  L   +   
Sbjct: 1   MDLQEKEN---KMFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKY 57

Query: 60  KEIQ---DRLCDNLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSN 115
           KE +     + D+L+LLE   +E+   + +E  +  +  ++   E  +   +     D  
Sbjct: 58  KEYKAEKQNIEDSLMLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDK 117

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +  +E+ AGAGG E+  +   + RMY  +AE +++K   L  ++    G K    ++ G 
Sbjct: 118 NIIVEMRAGAGGDEAGLFVADVARMYRSYAESKRWKVNTLSFNESGIGGFKELVFMVSGQ 177

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AY   K E GVHR+ RI   +S  R HTS  ++ + P V + +E+EI  +DC+ D +RA
Sbjct: 178 GAYSRFKYESGVHRVQRIPATESGGRIHTSTITVAIMPEV-EDVEVEIDMNDCKFDVFRA 236

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REE 294
           SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A  +LR++LYELE QK  +E
Sbjct: 237 SGNGGQCVNTTDSAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDE 296

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            A   +S         +IR+Y   P   V D R  +       +++GDLD+ + +  A  
Sbjct: 297 EAAKRKSQIGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAAD 355

Query: 355 K 355
           +
Sbjct: 356 Q 356


>gi|90416952|ref|ZP_01224881.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
 gi|90331299|gb|EAS46543.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
          Length = 360

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 180/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   +     D  +  +    + L +E   L+  +      +D + +      L
Sbjct: 9   LDHLSERYEEVGALLSDGDIISDQNRFRTLSKEYSELELLVKTYGSYKDVMENIEEAK-L 67

Query: 76  ALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
            L++ D  +     + ++    + +V   + + LL      DS + +LE+ AG GG E+ 
Sbjct: 68  LLKDSDTDMRDMAQEEMRSGEERRQVLELEIQKLLLPKDPKDSKNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE  ++K E +  + G+  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSKYAETNRWKVEIISENSGDHGGYKEVIARIVGQGVYSKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ +    D+   IEI++ D R+DT+RASG+GGQHVN TDSA+R
Sbjct: 188 RVPDTESQGRVHTSACTVAIMAEADEQDAIEINKGDLRVDTFRASGSGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           +TH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L  ++     +E ++  ++         
Sbjct: 248 LTHLPSGLVVECQDERSQHKNRAKAMSVLQARLTAMQDEAVAKEQSDQRKNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+      +V++G LDD +   +
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLGEVMEGSLDDVLGPLV 347


>gi|160945367|ref|ZP_02092593.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443098|gb|EDP20103.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
          Length = 361

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D   +R   L+ +   P    +    + LMRE    +  +   ++ Q  L        L 
Sbjct: 9   DAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTALDHLAQAKALL 68

Query: 77  LEED--DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            E    D    Q     +     +V   +       L     D  +  +E+ +GAGG E+
Sbjct: 69  EEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIMEIRSGAGGEEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ LLRMYT +A+ R +  E L +++ E  G+K A + + G  AY  LK E GVHR+
Sbjct: 129 ALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGGQH+N T SA+
Sbjct: 189 QRVPETETQGRIHTSTATVAVMPQA-EEVDFALDMKDLRIDTFRSSGAGGQHINKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I    + ++G G 
Sbjct: 248 RVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINAQRQGQVGTGD 305

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P     D R  +   +   ++DG+LD+ + A    ++
Sbjct: 306 RSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQ 352


>gi|296268873|ref|YP_003651505.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
 gi|296091660|gb|ADG87612.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
          Length = 350

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/343 (36%), Positives = 181/343 (52%), Gaps = 6/343 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  V+  + L  K  DP +  +  +A+   +    L   I+  +E+Q    D     
Sbjct: 1   MNLDELVKEYADLEQKLADPAVHADQAKARKYGKRYAELTPIITTYRELQSVREDLEAAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA   +D +  +E ++   +I    +  +   +     D  D  +E+ AG GG ES  +
Sbjct: 61  ELAR--EDPAFAEEAAELEAKIPELEDRLKRLLIPKDPNDGKDIIMEIKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKGEQGVHRLVR 192
           A  LLRMY R+AE+  +K E +     E  G K  T+ IKG   A+  LK E GVHR+ R
Sbjct: 119 AADLLRMYLRYAERLGYKAEIISAQPSELGGYKDVTISIKGKEGAWSRLKYEGGVHRVQR 178

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + VYP   + I+++I  +D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 179 VPVTESQGRIHTSAAGVLVYPEA-EEIDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRI 237

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311
           THIPTGVVV CQ E+SQ +NK  A  +LRA+L  L  Q+ E  A     S+   +    +
Sbjct: 238 THIPTGVVVSCQNEKSQLQNKEAAMRILRARLLALAQQEAEAAAAAERRSQVRTVDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R   +  +   VLDGDLD  ++A +  +
Sbjct: 298 IRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDGVIQALIDAE 339


>gi|227538599|ref|ZP_03968648.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241518|gb|EEI91533.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 357

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/344 (28%), Positives = 176/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      +R   +  +  +P    ++     L +E + L   +      ++ + +   
Sbjct: 1   MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLGKIVDQYHIYKNMVSNIDA 60

Query: 72  LLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   + L  +  + E + ++   +L      D+ +A +E+  G GG
Sbjct: 61  NKDILANEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+ E + ++ E +++ +G   G K   L + G +AYG LK E GV
Sbjct: 121 DEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGDDAYGQLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++E++  D  + T R+ GAGGQ+VN  +
Sbjct: 181 HRVQRVPDTETQGRVHTSAASVAVLPEA-EDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           + V++TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+  + A   ++  +  
Sbjct: 240 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKKHGDTAAKRKTMVSTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               ++R+Y   P   V + R  +   +   V+DGD+   + A 
Sbjct: 300 DRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDAL 342


>gi|332521778|ref|ZP_08398229.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
 gi|332042608|gb|EGI78809.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
          Length = 358

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 178/342 (52%), Gaps = 9/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLEL 75
             QR   ++     P +  +      L RE + L    +      E  + L +   ++  
Sbjct: 8   VKQRFDEVSDLIIQPDIITDQKRYVELNREYKDLRLLMDKRELYLEFTNNLAEAEEIIAD 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
             + +   + +   D  +    E+E  + + LL      D+ +A +E+ AG GG E+  +
Sbjct: 68  GSDPEMVEMAKMQYDEAKTAIPELEE-EIKVLLIPKDPQDAKNAVVELRAGTGGDEASIF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++ E + ++ + ++  +G   G K     + G + YG LK E GVHR+ R+
Sbjct: 127 AGDLYRMYTKYCESKGWRVDTVDYSEGTNGGFKEIQFEVSGDDVYGTLKFEAGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V+P   +  ++EI   D RID + +SG GGQ VNTT SAVR+T
Sbjct: 187 PQTETQGRVHTSAATVMVFPEA-EEFDVEIDPKDVRIDYFCSSGPGGQSVNTTYSAVRLT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQI 312
           H PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K+ EE A +  +  T      +I
Sbjct: 246 HEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKMEEDAALRGTMVTSGDRSAKI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           R+Y   P   V D R  +     S++++GD+   +   +  +
Sbjct: 306 RTYNY-PQGRVTDHRIGLTLYDLSNIVNGDIQKIIDELMLAE 346


>gi|114319440|ref|YP_741123.1| peptide chain release factor 1 [Alkalilimnicola ehrlichii MLHE-1]
 gi|119361505|sp|Q0AC04|RF1_ALHEH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114225834|gb|ABI55633.1| bacterial peptide chain release factor 1 (bRF-1) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 361

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 175/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   ++    +P    +      L RE   L+  I+ +   Q+         E+
Sbjct: 9   LERLRERHEEISALLAEPDTASDQKRFAALSREYAQLEPVIAELNHYQETEQALASAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
           A + DD  I +   + + + +  +E  + E     L     D  + YLE+ AG GG E+ 
Sbjct: 69  ARD-DDLEIREMAEEEISQAQARLEALEAELQVLLLPPDPNDGRNLYLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+  ++ E +   +GE+ G K     I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYARYAERHGWRLEEISASEGEQGGYKEVITRISGEGAWSRLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D   +I I+ ++ R+DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDAVEDITINPAELRVDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTGVVV+CQ ERSQHKN+AQA  +L+A+L   +  ++              G    
Sbjct: 248 ITHLPTGVVVECQSERSQHKNRAQALALLQARLKNAQQAEQSAQQTEQRRQLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+      ++L GDLD  ++  
Sbjct: 308 RIRTYNF-PQGRITDHRINLTLYRLEEILQGDLDQLVEPL 346


>gi|197301354|ref|ZP_03166435.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
 gi|197299511|gb|EDY34030.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
          Length = 356

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 187/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   +  + ++P +  +    + LM+E+  L   +   KE ++   +   
Sbjct: 1   MFDRLDDLLIRYEEVMGELQEPDVANDPERFRRLMKEQSDLAPIVEAYKEYKNCKQNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
            L+L  EE D  + +   + L   +  +E  + E     L     D  +  +E+ AGAGG
Sbjct: 61  SLQLLEEESDEEMRELAKEELSGSRARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMVTGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEA-EEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K++   A    S     
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQASEAAERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEIIDSLIAADQ 347


>gi|223938118|ref|ZP_03630015.1| peptide chain release factor 1 [bacterium Ellin514]
 gi|223893162|gb|EEF59626.1| peptide chain release factor 1 [bacterium Ellin514]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 16/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            D   +R S +     DP  ++N    + L +E   L   +   S   +    L +N  L
Sbjct: 7   IDKFARRFSEVEASLSDPKAFENAQRFQELSKEYSRLKGLVAGGSAYLKAVADLEENKTL 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGT 128
             LA E  D  +     + + R++  V+    E     L     DS +  +E+ AGAGG+
Sbjct: 67  --LAAEPADSEMALMAKEEVTRLEEVVKKLGLEVQAGVLPPDPTDSRNTIVEIRAGAGGS 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES  +A  L RMYTR+AE + +K E+++    +  G K     I G + Y  LK E GVH
Sbjct: 125 ESALFAADLYRMYTRYAESQGWKVESIDASPSDLGGFKEVIFGITGSDVYKRLKYESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + ++I+I   D  +D  RASG GGQ VNTTDS
Sbjct: 185 RVQRVPATEAQGRIHTSTCTVAVLPEA-EEVDIDIRPEDLSVDRCRASGKGGQGVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ HIP+G++V C  ERSQHKNKA+A  +LR++L  LE +  +E A      K ++G 
Sbjct: 244 AVRLHHIPSGLIVYCADERSQHKNKAKAMTVLRSRL--LEKKIADENAKYAAQRKEQVGT 301

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   V D R  +   +    ++G++D  ++  + 
Sbjct: 302 GERNERIRTYNF-PQNRVTDHRIEVTLYNLPTFVEGEIDSIIEPLMT 347


>gi|300920409|ref|ZP_07136843.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
 gi|300412542|gb|EFJ95852.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
          Length = 360

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +G   G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRGEIMSASEGGHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 345


>gi|311745348|ref|ZP_07719133.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
 gi|126577889|gb|EAZ82109.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
          Length = 358

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      +R   +      P    ++ +   L +E + L+  +S   E    L +   
Sbjct: 1   MLDKLQALKERFEEVGQLIILPDSMADMSKYAKLTKEYKDLEKIVSAYDEYSLVLQNITS 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
             E+  +E D    +     +  ++   +  + E     +     DS D  LE+  G+GG
Sbjct: 61  SKEMLDKEKDPEFREMAKLEIDELRSRKDELEEELKQLLIPKDPNDSKDCILEIRGGSGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+ E + +K   L++  G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYERFCEMQGWKLTVLDLTFGSAGGYKEIIATVSGADVYGMLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +S+ V P + D +E+ +  +D R DTY +SG GGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRVHTSAASVAVLPEM-DEVEVHLDMNDVRKDTYCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV CQ E+SQ KN  +A  +LR++LYE+EL K  E  ++G   K+ +G
Sbjct: 240 SAVRLTHNPTGLVVTCQDEKSQIKNFEKALKVLRSRLYEIELAKHNE--SVGAQRKSMVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y       V D R N    +  DV+DG +++F+ A 
Sbjct: 298 SGDRSDKIRTYNYS-QSRVTDHRINKTVYNLPDVMDGHIEEFISAL 342


>gi|322434298|ref|YP_004216510.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
 gi|321162025|gb|ADW67730.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
          Length = 358

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 97/347 (27%), Positives = 169/347 (48%), Gaps = 10/347 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L+    DP L  +  + + + +E + ++  +   ++ +        
Sbjct: 1   MFDRLAQMEVRYDSLSRDMSDPVLVNDQKKFQAIAKEHRLMEPIVEKYRQYRKVADGIAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E  D  + +   + L  ++ ++E      +   L     D  +  +E+ AG GG
Sbjct: 61  AKAMLSES-DPDLKEMAKEELASLEPQLEPIAEALKVMLLPKDPNDDKNIVIELRAGTGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQG 186
            E+  +   + R+Y R AE+ ++K + L         G+K  T + +G   Y  +K E G
Sbjct: 120 DEAALFVAEMFRVYLRLAEQHRWKVQVLSESFSGIGNGLKDVTAIFEGDRVYSQMKYESG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ V P   + ++I+I   D R+DT+ +SG GGQ VNTT
Sbjct: 180 VHRVQRVPATETQGRVHTSAITVAVLPEA-EEVDIKIEAKDLRVDTFCSSGPGGQSVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTE 305
            SA+RITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE  E  + +  A I +     
Sbjct: 239 YSAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVAEETRHQAEAKIRKDQVGT 298

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                +IR+Y   P   + D R  +   + + V++G L   + A +A
Sbjct: 299 GDRSEKIRTYNF-PQNRLTDHRIGLTNHNLNMVMEGQLQPTIDALIA 344


>gi|182415309|ref|YP_001820375.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
 gi|177842523|gb|ACB76775.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
          Length = 383

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 111/352 (31%), Positives = 176/352 (50%), Gaps = 12/352 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  L D     +RL  L+ +  +P  + N   A  + RE+Q L   ++  +E     
Sbjct: 6   LESMDELPDLAPFQRRLDELDAQMAEPTFYANARRAAEVSREQQKLQQLVADYQEYDRLG 65

Query: 67  CDNLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEV 121
            +      L  +   D  + +     L  ++      +   LL        DS +  +E+
Sbjct: 66  REAAEAAALGKDPAADPDLRELAQAELPELERRRAALRQAVLLAMIPPDPTDSRNTVMEI 125

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +A  L RMY+R+A+ + +K + +     E  G K    LI G + Y  L
Sbjct: 126 RAGTGGDEASLFAADLFRMYSRYADGQGWKIQPMSSSMSERGGFKEVIFLISGTDVYKRL 185

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   ++N R HTS  ++ V P   + ++++I   +  I   RASG GGQ
Sbjct: 186 KFESGVHRVQRVPVTEANGRIHTSTVTVAVLPEA-EEVDVQIDPQELEITVTRASGPGGQ 244

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAV+I H PTG++V C  ERSQ KNKA+A  +LR++L  L+ ++ EE A    +
Sbjct: 245 GVNTTDSAVQIVHKPTGLIVTCADERSQIKNKAKALTVLRSRL--LQRREEEERAKYAAT 302

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +++IG G    +IR+Y   P   + D R  +   +   VL+G +D  + A 
Sbjct: 303 RRSQIGSGDRSERIRTYNF-PQNRLTDHRIGLTLYNLPQVLEGGIDPIIAAL 353


>gi|239817175|ref|YP_002946085.1| peptide chain release factor 1 [Variovorax paradoxus S110]
 gi|259585259|sp|C5CXW3|RF1_VARPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239803752|gb|ACS20819.1| peptide chain release factor 1 [Variovorax paradoxus S110]
          Length = 362

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 179/343 (52%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +       +  + R  D     E+
Sbjct: 9   LERYAQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYKQREADIAGAAEM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     Q  +    E  Q   L     D+ +A+LE+ AG GG ES  +A
Sbjct: 69  LEDPDMAEMAREEIAAAQAELVQLEEELQRLLLPKDPDDARNAFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+ E+  ++ E +   + E  G K   + I G + +G L+ E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRIAGNDVFGRLRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+++ ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+V +CQ +RSQH+NKA+A  +L A++   E  + E  A      K  IG G    +
Sbjct: 249 IPTGIVAECQDDRSQHRNKAKALQVLSARI--QEKDRSERAAKDAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       +++GDL D + A  A +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQAIMEGDLGDVLDALRAAR 348


>gi|16760669|ref|NP_456286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16765117|ref|NP_460732.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29141572|ref|NP_804914.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62180340|ref|YP_216757.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161613728|ref|YP_001587693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168241358|ref|ZP_02666290.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168259999|ref|ZP_02681972.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168462748|ref|ZP_02696679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820514|ref|ZP_02832514.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443280|ref|YP_002041026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448370|ref|YP_002045819.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471193|ref|ZP_03077177.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197250213|ref|YP_002146253.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|198242115|ref|YP_002215369.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389390|ref|ZP_03216001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207856717|ref|YP_002243368.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213051786|ref|ZP_03344664.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213426495|ref|ZP_03359245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213617488|ref|ZP_03372314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213648795|ref|ZP_03378848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238913676|ref|ZP_04657513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289827376|ref|ZP_06545996.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|61230201|sp|P0A287|RF1_SALTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61230203|sp|P0A288|RF1_SALTI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75482992|sp|Q57NN5|RF1_SALCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039989|sp|A9MW04|RF1_SALPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690045|sp|B5F4H6|RF1_SALA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690378|sp|B5FU19|RF1_SALDC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690453|sp|B5R3J9|RF1_SALEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690683|sp|B4TKA4|RF1_SALHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693511|sp|B4SUG2|RF1_SALNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299687|pir||AB0720 peptide chain release factor 1 (RF-1) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154104|gb|AAA88611.1| release factor 1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420306|gb|AAL20691.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502965|emb|CAD02131.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137199|gb|AAO68763.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127973|gb|AAX65676.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161363092|gb|ABX66860.1| hypothetical protein SPAB_01453 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401943|gb|ACF62165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406674|gb|ACF66893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457557|gb|EDX46396.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195633960|gb|EDX52312.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197213916|gb|ACH51313.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197936631|gb|ACH73964.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199601835|gb|EDZ00381.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339285|gb|EDZ26049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342722|gb|EDZ29486.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205351018|gb|EDZ37649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206708520|emb|CAR32841.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246962|emb|CBG24779.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993724|gb|ACY88609.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158300|emb|CBW17799.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912765|dbj|BAJ36739.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320085723|emb|CBY95501.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224404|gb|EFX49467.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322714814|gb|EFZ06385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323130046|gb|ADX17476.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326623115|gb|EGE29460.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988663|gb|AEF07646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 360

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|51891211|ref|YP_073902.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
 gi|81610729|sp|Q67TD5|RF1_SYMTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51854900|dbj|BAD39058.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
          Length = 356

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 175/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  VQR   L  K  DP +  N  E + + RE   L   +   +  Q    +   +LE+
Sbjct: 5   LEGVVQRYEDLTYKLGDPSVINNPTEYRQVAREHNRLGPIVEKFRAYQKTERELDDVLEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D       +  L+ +K ++    +  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LEGPLDPEERALFNQELRDLKEKLQTLSDELRILLLPRDPNDDKNVIMEIRAGAGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR AE+ K+KTE L I + E  GIK     I    AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYTRLAERHKWKTEVLSISENEAGGIKEVLFQINAEGAYSRLKYEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + + ++IEI   D +I+  RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESQGRIHTSTVTVAVMPEM-EEVDIEIKPEDLKIEVQRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV C  ERSQ +N+ +A  +LRA++ +    Q + E   +  +         
Sbjct: 244 MTHLPTGIVVYCADERSQMQNREKALRVLRARVADYYAQQAKSEEEQLRRAQVGTGERSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +   + + V+DG++D  + A    ++
Sbjct: 304 KIRTYNF-PQDRVTDHRIGLTVHNIAAVMDGEIDHIIDALAQHEQ 347


>gi|227499754|ref|ZP_03929854.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
 gi|227218140|gb|EEI83406.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
          Length = 358

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 183/345 (53%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  K  DP +  ++     + RE   L   +    +I+D         EL
Sbjct: 5   IEHIKENYKDLEKKMIDPEVLADISRLTKITREYNSLKPIVEKYDQIKDAESTIEENKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E DD  ++    + ++  +  ++    + + LL      DS D  +E+  GAGG E+ 
Sbjct: 65  INEADDQDMIDMLKEEIKENEKLLDQYNEEMKILLIPKDPNDSRDVIVEIRPGAGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K  +KTE +E+      GIK AT +++G  AY   K E GVHR+ 
Sbjct: 125 LFAGDLYRMYHMYADKEGYKTEDVEVTPQGVGGIKDATFMVRGEGAYSRFKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V D +++ +  +D R D +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEV-DELDVHVDPNDIRTDVFRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q E+SQ KNK +A  +L A++YELE +KR +EIA+  +S         
Sbjct: 244 LTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKEIADNRKSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N       D L+G + + + + +A  +
Sbjct: 304 RIRTYNF-PQGRITDHRINKTIYQLDDFLNGGIGEMIDSLIAEDQ 347


>gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205]
 gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205]
          Length = 362

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 170/340 (50%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + + +E+E       +     D+N AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIKENKALLVELEEQLNVLMIPKDPNDANAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRVDGEGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+GVVV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|312884085|ref|ZP_07743798.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368255|gb|EFP95794.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 362

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 176/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN--LILL 73
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LETLVERYEEVQHLLGDPEIIGDQDKFRSLSKEYSQLEEVTKCFQAFQQAQEDLTAAEEM 68

Query: 74  ELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               +E+   + QE     ++    + E  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEEDEEMREMAQEEIAQSKQAIENLSEELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG +K E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKKGWRIEVMSSNEAEHGGYKEMIAKVSGEGAYGIMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR    +    +    G    +
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEESDTRRNLLGSGDRSDR 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+     ++V++GD+   +   L
Sbjct: 309 IRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVL 347


>gi|326798862|ref|YP_004316681.1| peptide chain release factor 1 [Sphingobacterium sp. 21]
 gi|326549626|gb|ADZ78011.1| Peptide chain release factor 1 [Sphingobacterium sp. 21]
          Length = 357

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 97/340 (28%), Positives = 176/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +  +  +P    ++     L +E + L   +      ++ + +     ++
Sbjct: 5   LEAIKLRWEEVERELSNPDTVNDMKRFAKLNKEYKDLGKIVDEYYIYKNIISNIETNKDI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   ++L  + ++ E K+       +     D+ +A  E+  G GG E+ 
Sbjct: 65  LANEKDQELREMAKEDLDALLVQKEEKEEKVRLMMIPKDPEDAKNAIFEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+ +++ ++ E +++ +G   G K   L + G + YG LK E GVHR+ 
Sbjct: 125 LFAGDLYRMYTRYFDQKGWRVEVMDVTEGTAGGYKEVILKVSGEDVYGQLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 185 RVPDTETQGRVHTSAASVAVLPEA-EEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+  +IA   ++  +      
Sbjct: 244 LTHKPSGIVVVCQVERSQLANRELAMEMLRTKLYELEVQKKHGDIAAKRKTMVSTGDRSA 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V + R  +   +   ++DGD+ + + A 
Sbjct: 304 KIRTYNY-PQGRVTEHRIGLTMYNLPAIMDGDIQEIIDAL 342


>gi|329939826|ref|ZP_08289127.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
 gi|329301396|gb|EGG45291.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
          Length = 361

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 177/350 (50%), Gaps = 18/350 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D     E 
Sbjct: 5   VEELVGEHADLEKKLADPAVHADQANARRLNKRYAELTPIVATYRSWKRTGDDLGTAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD   + E  +  Q+ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFVAEVKELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------------GPNAYGWLK 182
            LLRMY R+AE+  +KTE ++  + E  G K   + +K             G   +  LK
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKPHGVSQGATEPGQGVWARLK 182

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS + + V P   + +++EI+ SD RID YR+SG GGQ 
Sbjct: 183 YEGGVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEVDVEINPSDLRIDVYRSSGPGGQS 241

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E+ A     S
Sbjct: 242 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEKEAADARRS 301

Query: 303 K-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 QVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 350


>gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
          Length = 360

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  K ++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKCQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby]
 gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|166223567|sp|A5IED7|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str.
           Corby]
 gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 362

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 180/342 (52%), Gaps = 7/342 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
                 ++R   +     +  +  +  + K L +E   L+      +   +   +   L 
Sbjct: 7   LKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKNNLDSLN 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           EL LE DD  +     + +  +K ++E      Q+  +     D  + YLEV AG GG E
Sbjct: 67  EL-LESDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK E G HR
Sbjct: 126 AAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA
Sbjct: 186 VQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGW 308
           +RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+ +E A   +S       
Sbjct: 246 IRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKSLVGTGDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R N+     SD+++G+L   +   
Sbjct: 306 SERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNLSLVIDPL 346


>gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
 gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
          Length = 359

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 173/329 (52%), Gaps = 12/329 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP +  N  E + L +E   L   ++  +E +  L D     EL  E  D  + +  
Sbjct: 20  LLSDPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKE-PDQEMREMA 78

Query: 89  SDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
              L  ++   E  +       L     D  +  LE+ AG GG ES  +A  L RMY+R+
Sbjct: 79  QAELLSLEARREVLEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRF 138

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE  +++ E +   + E+ G K    L++G   +  LK E G HR+ R+   ++  R HT
Sbjct: 139 AETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHT 198

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ V P   + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ
Sbjct: 199 SACTVAVMPEA-EDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQ 257

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
           +ERSQ KN+A+A  +L++++  L+    E+ A +    K+++G G    +IR+Y   P  
Sbjct: 258 EERSQIKNRAKAMKVLKSRI--LDNIVMEQNAKLAADRKSQVGSGDRSERIRTYNF-PQG 314

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            + D R  +       ++ GD+ +   + 
Sbjct: 315 RMTDHRIGLTLYRLDAIMAGDIAEIADSL 343


>gi|326796200|ref|YP_004314020.1| peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
 gi|326546964|gb|ADZ92184.1| Peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
          Length = 362

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 179/343 (52%), Gaps = 7/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           F  ++  +R   L     +  +  +    +   +E   L+  +   +E Q  L +     
Sbjct: 7   FKLESLAERYEELAALLSEADVIMDQNLFRNYSKEYSELEPVVKCFEEYQVVLENLEEA- 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +L L + D  I +   + L+    + E      Q   L     DS + +LEV AG GG E
Sbjct: 66  QLMLTDSDPDIKEMGQEELKSGNEQKETLLLDLQKLLLPKDPNDSKNVFLEVRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  ++  L RMY+R+AE +++K E +  ++GE  G K     I G  AY  LK E G HR
Sbjct: 126 ASIFSGDLFRMYSRYAETQRWKVEIVSANEGEHGGYKEIIARIVGEGAYSKLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P +D+  +I+I+++D RIDT+RASGAGGQHVN TDSA
Sbjct: 186 VQRVPATESQGRIHTSACTVAVMPEMDEVSDIDINKADLRIDTFRASGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           +RI H+PTGVVV+CQ ERSQHKN+A+A  +L ++L   E  K     +    S    G  
Sbjct: 246 IRIVHLPTGVVVECQDERSQHKNRAKAMALLASRLKAAEEDKAAAEQSETRRSLVGTGDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+      +++ GDLD  +   +
Sbjct: 306 SDRIRTYNY-PQGRVTDHRINLTLYKLDEIVAGDLDVLVGPLV 347


>gi|283785500|ref|YP_003365365.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
 gi|282948954|emb|CBG88557.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
          Length = 360

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + +    D      +
Sbjct: 9   LEALHERHEEVQALLGDAETIADQERFRALSREYAQLSDVSRCFTDWRQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELRDAKEKSEQLEQQLQLLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + +++GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAETRRWRVEIMSMNEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTYRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPVV 345


>gi|257452575|ref|ZP_05617874.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|257466434|ref|ZP_05630745.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917590|ref|ZP_07913830.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059115|ref|ZP_07923600.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313684791|gb|EFS21626.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313691465|gb|EFS28300.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 359

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 124/352 (35%), Positives = 184/352 (52%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   L+T    P +  +  +     +    L   I   KE +    D   
Sbjct: 1   MFDKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKDDVEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  +     + L+  + ++    +  +   L     D N+  +E+  GAGG
Sbjct: 61  IKESLKTEKDEDMRSMMQEELKENEEQMPELEKELKILLLPKDPNDDNNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE++K+K E +E  D E   G+K     I+G  AY  LK E G
Sbjct: 121 DEAAIFAGDLFRMYCRYAERKKWKIEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P V+D  E+ I   D +IDTYR+ GAGGQHVN T
Sbjct: 181 VHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVHIDPKDLKIDTYRSGGAGGQHVNMT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+VQCQ ERSQ KN+ +A   L +KL E+E++K+   + I    + ++
Sbjct: 241 DSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEVEKQR--SEIEGERRLQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +        LDGDLD+ + A +   +
Sbjct: 299 GTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQ 349


>gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627]
 gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627]
          Length = 360

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  DA+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERDAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIV 345


>gi|260598215|ref|YP_003210786.1| peptide chain release factor 1 [Cronobacter turicensis z3032]
 gi|260217392|emb|CBA31449.1| Peptide chain release factor 1 [Cronobacter turicensis z3032]
          Length = 360

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/338 (33%), Positives = 174/338 (51%), Gaps = 3/338 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      E +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARLM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q E  +   + +   +  Q   L     D  +AY+EV AG GG E+  +A
Sbjct: 69  LSDPEMRDMAQDELLEAKAKGEALEQELQLLLLPKDPDDERNAYVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIR 313
           +PTG+VV+CQ ERSQHKNKA+A  +L A+++  E  KR++  A+   +         + R
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKRQQAEASTRRNLLGSGDRSDRNR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 309 TYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEPII 345


>gi|168237830|ref|ZP_02662888.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197289243|gb|EDY28610.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 360

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A ++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGACIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
 gi|212672934|gb|EEB33417.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
          Length = 356

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 105/339 (30%), Positives = 169/339 (49%), Gaps = 6/339 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L      P ++ +  + + L +    L + +   +  +    +     +L
Sbjct: 5   LEGLEKKYMELEQALAQPDVYNDQDQYRKLTKAHADLRDVVELFRRHRSLTQELEENKQL 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
             + D D   + +        +L     + + LL      D  +  LE+ AG GG E+  
Sbjct: 65  LHDSDPDIKAMAQEEIAAAEAELPELEHKIKVLLLPKDPLDEKNTILEIRAGTGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+AE + +K E +     +  G K    LI G   Y  LK E G HR+ R
Sbjct: 125 FAADLFRMYTRYAEIKGWKVEIMSESPSDSGGYKEIICLISGDRVYSHLKFEAGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI   D RID YRASGAGGQHVN T+SAVRI
Sbjct: 185 VPATETQGRIHTSAATVAVMPEA-EEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQ 311
           THIPTG VV CQ ERSQHKNKA+A  +L +++   E +++  E++   ++         +
Sbjct: 244 THIPTGTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSADRKAQVGSGDRSER 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P     D R N+   S   +++G+++   +A 
Sbjct: 304 IRTYNF-PQGRCTDHRINLTLYSLDRIMEGEVEPLFEAL 341


>gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus sp. MC-1]
 gi|226739111|sp|A0LDT7|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus sp.
           MC-1]
          Length = 361

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 176/348 (50%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R + L+    DP    +        +E   L+  ++  +     L       E+
Sbjct: 7   LESLTSRHAELSAHLADPTTVSDSKRFAAYSKEFSDLEPVVAAWQAHLAILQQLAETDEM 66

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E  DD  + Q   +  + +K ++E  Q       L     D  +  LE+ AG GG E+
Sbjct: 67  LAEAGDDAEMRQMAREERETLKNKLEQSQKHLHLMLLPKDPNDDKNVILEIRAGTGGEEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + L RMY R+AE + ++ E L     +  G K    +++G  AY  LK E GVHR+
Sbjct: 127 ALFVSDLFRMYGRFAEIKGWRIEMLSSSATDLGGYKELIAMVQGKGAYMGLKYESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS  ++ + P   D +E+ I + D RID YR+SG GGQ VNTTDSAV
Sbjct: 187 QRIPVTETGGRIHTSAVTVAILPEA-DEVELHIEDKDLRIDVYRSSGPGGQSVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV CQ E+SQHKNKA+A  +L+A+L + +  ++   +   E+ K ++G G 
Sbjct: 246 RITHLPTGLVVICQDEKSQHKNKAKAMKVLQARLLDAQ--QQAADSQRAEARKGQVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       VL G L + + A  A  +
Sbjct: 304 RSERIRTYNF-PQSRVTDHRINLTLHKLDQVLQGGLAEVVDALTAHDQ 350


>gi|260891992|ref|YP_003238089.1| peptide chain release factor 1 [Ammonifex degensii KC4]
 gi|260864133|gb|ACX51239.1| peptide chain release factor 1 [Ammonifex degensii KC4]
          Length = 355

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 182/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  K  DP +  +    +  ++    L+  +S  +E +  L        L
Sbjct: 5   LAELETQFEDLTLKIADPEVMADQKRWREYVKRHAELEPIVSTYREYKRVLEGIEEAEML 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L+ +K   E  + E           D  +  LE+ AG GG E+ 
Sbjct: 65  LDQEQDEELRELAEEELETLKERREELEKELKILLLPKDPNDEKNVILEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AEKR +KTE L     +  G K   +LI+G  AY +LK E GVHR+ 
Sbjct: 125 LFAADLLRMYLRYAEKRGWKTELLSASPTDLGGFKEVVVLIEGRGAYSFLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + +++EI   D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPVTEASGRIHTSAATVAVLPEA-EEVDVEIDPKDIRVDTFCSSGHGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV CQ ERSQ KN+ +A  +LRA+L +L+ +++E        ++ + G    
Sbjct: 244 ITHLPTGIVVTCQDERSQLKNREKAMKVLRARLLDLKRREQEAAIAAERRAQVKSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++R+Y   P   V D R N+      ++L+GDLD+ + A  A  +
Sbjct: 304 RVRTYNF-PQNRVTDHRINLTLYRLEEILEGDLDELITALAAADQ 347


>gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
 gi|189039978|sp|A6W1C2|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
          Length = 362

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 180/343 (52%), Gaps = 7/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              ++   R   L        +  +    +   +E   L+  +    E Q  + +N+   
Sbjct: 7   LKLESLSDRYDELAALLGVAEVIMDQDLFRAYSKEYAELEPVVKCFNEFQQ-IDENIAEA 65

Query: 74  ELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           EL + + D  I +   +     L + +      Q   L     DS + +LEV AG GG E
Sbjct: 66  ELMMTDADPDIKEMGVEEYKAGLAQKEELQLVLQKLLLPKDPNDSRNVFLEVRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  ++  L RMY+R+AE +++K E +   DGE  G K     I G  AY  LK E G HR
Sbjct: 126 ASIFSGDLFRMYSRYAETQRWKVEIVSASDGEHGGYKEVIARIVGEGAYSKLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P +D+  +I I++SD RIDT+RASGAGGQHVN TDSA
Sbjct: 186 VQRVPATESQGRIHTSACTVAVMPEMDEVDDIIINKSDLRIDTFRASGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           +R+THIPTGVVV+CQ+ERSQHKN+A+A ++L ++L   EL+K   E +   +S       
Sbjct: 246 IRLTHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAELEKAASEQSETRKSLVGSGDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+      +++ G+LD  +   +
Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYKLDEIVAGELDSLINPLV 347


>gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189039988|sp|A9MPA1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 360

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGEGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|283832855|ref|ZP_06352596.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
 gi|291071455|gb|EFE09564.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
          Length = 360

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKCEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ +R++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIV 345


>gi|257464973|ref|ZP_05629344.1| peptide chain release factor 2 [Actinobacillus minor 202]
 gi|257450633|gb|EEV24676.1| peptide chain release factor 2 [Actinobacillus minor 202]
          Length = 248

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 145/247 (58%), Positives = 188/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+ +VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSCIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|227514467|ref|ZP_03944516.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|227087153|gb|EEI22465.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|299782948|gb|ADJ40946.1| Peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT
           5716]
          Length = 362

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 109/355 (30%), Positives = 177/355 (49%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            +  +FD       R   LN    DP +  +      L +E   L   +    E ++   
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQ 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHA 123
                 E+  EE D  +++ T + L   K        + E LL      D  +  +E+  
Sbjct: 62  TIKDDTEMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+
Sbjct: 182 ENGAHRVQRIPATESAGRVHTSTATVGVMPEA-EDVDVDLDPKDIRVDVYRSSGAGGQHI 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+    +++E +      K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDY--YQQQEQSEYDAQRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +   +
Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 352


>gi|291524540|emb|CBK90127.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale DSM 17629]
          Length = 358

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 183/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +     L     +P +  +    K LM+E+  L   +   K+ ++   +   
Sbjct: 1   MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L+  K +VE  + E           D  +  +E+ AGAGG
Sbjct: 61  SLAILNEESDEEMRELAKEELKDSKEQVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +K E L+  +    G+KS   ++KG  AY  LK E GV
Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS  S+ V P   + ++++I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEA-EDVDVKIDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR KLY++ELQK++   A    S     
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +L+GD+ + + A +A  +
Sbjct: 300 DRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|323698089|ref|ZP_08110001.1| peptide chain release factor 1 [Desulfovibrio sp. ND132]
 gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
          Length = 355

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 169/342 (49%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  +  +P ++ +    K + +    L   +   +  +    +     E+
Sbjct: 5   LEEIEEKYVLLEQELAEPDIFNDQERYKKVSKAHADLSEVVEAFRRYKQLSQELDDNREM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L + D  I +     +  ++ E+    E  +   L     D  +  LE+ AG GG E+ 
Sbjct: 65  -LNDADPEIREMAKAEIDDLEGELPEIEEQLKVLLLPKDPMDEKNIILEIRAGTGGDEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE   +K E +  +     G K     I G   Y  LK E G HR+ 
Sbjct: 124 LFAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASISGDKVYSKLKYESGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + ++I++   D R+D +R+SG GGQ VNTTDSA+R
Sbjct: 184 RVPATESQGRIHTSAVTVAIMPEA-EEVDIDLRPEDLRVDVFRSSGPGGQSVNTTDSAIR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIP+G++V CQ E+SQHKNKA+A  +LR++L ++E  K +        S+   G    
Sbjct: 243 VTHIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKAKAEQEANRRSQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++G+L D   A ++
Sbjct: 303 RIRTYNY-PQGRVSDHRINLTLHQLPQIMEGELQDLTDALIS 343


>gi|325921457|ref|ZP_08183312.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
 gi|325548004|gb|EGD19003.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
          Length = 361

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++      D      +
Sbjct: 9   LEALAERREELQHLLSDPEVVSNNDKFRTLSRELSQLEPLAVALEDEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + +   +  ++    Q   LL      D  + +LEV AG GG E+ 
Sbjct: 69  ---RNDPEMRELAEEEIATAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ 
Sbjct: 126 IFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+R
Sbjct: 186 RVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G  
Sbjct: 246 ITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDR 303

Query: 311 --QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 304 SQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLL 346


>gi|160900908|ref|YP_001566490.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
 gi|238687199|sp|A9BP60|RF1_DELAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160366492|gb|ABX38105.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
          Length = 360

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 178/341 (52%), Gaps = 3/341 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  LN       +  ++ + + + RE   +          + R  D     ++
Sbjct: 9   LERYAQRLEELNFLLSREDIMGDMKQYRAISREHADVTAIAGRYARHRQREADLAAAQDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE   + +   +++E +    LL     D+ +AYLE+ AG GG ES  +A
Sbjct: 69  LSDPDMADMAQEEIASAEAELVQLEDELQRLLLPKDPDDARNAYLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR  +   +K E +  ++ E  G K   L ++G + YG L+ E G HR+ R+ 
Sbjct: 129 GDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRVEGTDVYGRLRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIR 313
           +PTG+V +CQ  RSQH NKA+A  +L+A+L E E  +RE   A + +          +IR
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSEREAKEAALRKGLIGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   + D R N+       V++GDL D + A  A +
Sbjct: 309 TYNF-PQGRLTDHRINLTIYKLLAVMEGDLGDVLDALQAAR 348


>gi|297585440|ref|YP_003701220.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
 gi|297143897|gb|ADI00655.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
          Length = 356

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++   R   LN    DP +  +  + +   +E+  L   +   ++ +D       
Sbjct: 1   MFDRLESVENRYEQLNELLMDPAVMNDTDKLRDYSKEQSGLQETVEAYRQYKDIKSQVED 60

Query: 72  LLELALEEDDCSILQETS----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  + +       +    +    E  +   +     D  +  +EV   AGG
Sbjct: 61  TKEMLRDHLDDEMREMAKMELDELETELGELEEKLRVLLIPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE + +KT+ +E  +    G K     I G  AY  +K E G 
Sbjct: 121 DEAALFAGDLYRMYHRYAESQGWKTDVIEASETGIGGYKEIVFTINGTGAYSKMKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++ISE D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPATESGGRIHTSTATVAVLPEA-EDVEVDISEKDIRVDRFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   E+ K+ +G
Sbjct: 240 SAVRLTHEPTGIVVSCQDEKSQIKNKEKAMKVLRARIYD--KYQREAQAEYDENRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTIQKLDQILEGKLDEIIEALIVEEQ 347


>gi|291514939|emb|CBK64149.1| bacterial peptide chain release factor 1 (bRF-1) [Alistipes shahii
           WAL 8301]
          Length = 361

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +      K  DP +  +V +   L +E + L+  I   +  +  + +     + 
Sbjct: 10  LDGLKLKYEETGQKLTDPEVIADVKQFIQLTKEYKELEPIIETSERYRTAIANLAEAKDT 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  + +   + +  ++ ++   +       +     DS +A +E+  G GG E+ 
Sbjct: 70  LATDKDEEMREMAREMIAELEPQLAQMEEEIKLLLIPKDPQDSKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYT++ E + ++ E     DG   G K   L + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLLRMYTKYIESKGWRYEITSSSDGAAGGFKEVVLKVSGQNVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  +IEIS +D R D + ASG GGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEA-EEFDIEISMNDIRKDIFCASGPGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K  +EIA+  ++  +      
Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDEIASKRKTMVSTGDRSA 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 309 KIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 351


>gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
 gi|166223578|sp|A6Q162|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
          Length = 354

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 182/335 (54%), Gaps = 6/335 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR + +N     P + Q++ +   L +E+  ++  +   KE  + L        L  +E+
Sbjct: 11  QRYNEINELLSSPEITQDIKKMTALSKEQSEIEPIVEKAKEYMNILEAIEENRSLIEDEE 70

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLL 138
              + +E    L+  K ++E  + + LL      D  D YLE+ AG GG E+  +A+ L 
Sbjct: 71  LGELAKEELKELEPKKEQLEE-EIKVLLISKDPNDEKDIYLEIRAGTGGEEAALFASDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+AEK+ ++ E +   + +  G K     IKG   Y  LK E G HR+ R+   +S
Sbjct: 130 KAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKYEAGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P V D +++EI+ +D +ID YR+SG GGQ VNTTDSAVRITHIPTG
Sbjct: 190 QGRIHTSAVTVAIMPEV-DDVDVEINPNDLKIDVYRSSGHGGQSVNTTDSAVRITHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIRSYVL 317
           +VV  Q E+SQHKNK +A  +L+A+++E  +++++E  A   +          +IR+Y  
Sbjct: 249 IVVAMQDEKSQHKNKEKALKILKARIFEKRMREQQEALAKDRKEQVGSGDRSERIRTYNF 308

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            P   V D R  +      +V+ GDLD  ++  +A
Sbjct: 309 -PQNRVTDHRIGLTLYKLEEVMQGDLDQIIEPLIA 342


>gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
          Length = 353

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 176/343 (51%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   +   L  +   P ++Q+    + + ++   LD  +   +  +  L +     EL
Sbjct: 5   LESLAAKYRELEREMSTPEIFQDQERYRKIAKKHAELDEIVKAFELYKTLLREMAENQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
           A +  D  + +     +  +K  +  ++   + LL      D  +  LE+ AG GG E+ 
Sbjct: 65  AKDS-DPELCEMAQAEIVLLKAAIGEQEKVLKQLLTPKDPLDEKNIILEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMY+R+AE   ++ E L   D    G K     + G N Y  LK E G HR+ 
Sbjct: 124 LFVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFKEIIASVSGTNVYSKLKYESGAHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + ++++I  +D R+D +R+SG GGQ VNTTDSA+R
Sbjct: 184 RVPATESQGRIHTSAITVAILPEA-EEVDVKIDPNDIRVDVFRSSGPGGQSVNTTDSAIR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+ TG+VV CQ E+SQHKNKA+A  +LR++L  L+  + E      ++ K+++G G  
Sbjct: 243 ITHLATGLVVICQDEKSQHKNKAKALKVLRSRL--LQAAQDETKKAYDDNRKSQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   +    ++G +DD +   +
Sbjct: 301 SERIRTYNY-PQGRVTDHRINLTLYNLDQAMEGHIDDIIDGLV 342


>gi|149925825|ref|ZP_01914089.1| peptide chain release factor 1 [Limnobacter sp. MED105]
 gi|149825942|gb|EDM85150.1| peptide chain release factor 1 [Limnobacter sp. MED105]
          Length = 360

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 122/340 (35%), Positives = 174/340 (51%), Gaps = 7/340 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +RL+ L       +   ++ + K + RER  L  A     E      D     E   
Sbjct: 11  RLAERLADLEEFLSSQNAANDMAQFKAITRERSELLPATERFAEYLSIEADLNTAQEWLS 70

Query: 78  EEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + D   + +E     +    ++E   Q   L     D  +A LE+ AG GG ES  +A  
Sbjct: 71  DPDMRDMAREEIAQNEAKLAQLEADLQRLLLPKDPNDHRNAMLEIRAGTGGDESALFAGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMYTR+AE++ ++ E +   + E  G K   + + G + Y  LK E G HR+ R+   
Sbjct: 131 LFRMYTRYAERQGWQIEVMSASESELGGYKEVIIRLAGDHVYKHLKFESGGHRVQRVPAT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ V    D++  IEI+ +D RIDTYRASGAGGQH+N TDSAVRITH+P
Sbjct: 191 ESQGRIHTSACTVAVMAEPDEAEVIEINPADLRIDTYRASGAGGQHINKTDSAVRITHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV+CQ ERSQHKNKA+A  +L  +L +     RE  A      ++ +G G    +IR
Sbjct: 251 TGLVVECQDERSQHKNKAKAMKVLNVRLQD--KIDRERQAAEASERRSLVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +Y   P   + D R N+       ++DGDL D M    A 
Sbjct: 309 TYNF-PQGRMTDHRINLTLYKLDYIMDGDLTDLMNGLTAF 347


>gi|254504878|ref|ZP_05117029.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
 gi|222440949|gb|EEE47628.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
          Length = 357

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 127/346 (36%), Positives = 183/346 (52%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            DN + R + L       P    +      L RE   L+  +  I+ +     D     +
Sbjct: 7   LDNLLDRFAELEHMMSANP----DPASYVKLSREYAGLEPLVLKIRALVKAEEDLKGAED 62

Query: 75  LALE-EDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  +   D  + +        +   VE      +   L   EAD+NDA LEV AG GG E
Sbjct: 63  LIEDPATDPEMRELAELERDELSENVERLTQDVRIGLLPKDEADTNDAILEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE R +K E L   +GE  G K     + G N +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRYAELRGWKVEILSASEGEVGGFKEVIASVSGENVFARLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   ++++I++ +SD RIDT+RASGAGGQHVNTTDSA
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLPQA-ENVDIDVQDSDLRIDTFRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+VV  Q ERSQHKNKA+A  +LRA++Y+ E       +   E+ + ++G G
Sbjct: 242 VRITHIPTGIVVAVQDERSQHKNKARAMQLLRARIYDEER--ERAASERTEARRLQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   V D R  +       ++ G+ LD+ ++A +
Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGLTLYKLDQIIAGESLDEVIEALI 344


>gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44]
 gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44]
          Length = 248

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 144/246 (58%), Positives = 186/246 (75%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +  GEAD  + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIK
Sbjct: 1   MFGGEADPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYG L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ S
Sbjct: 61  SATIKVEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+
Sbjct: 121 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYD 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR E     E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|300716406|ref|YP_003741209.1| peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
 gi|299062242|emb|CAX59359.1| Peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 172/341 (50%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +  Q    D     E+
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVSQCFRRWQQNQDDIAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     + L+  +       +  Q   L     D  + YLEV AG GG E+ 
Sbjct: 69  L---DDPEMRDMAQEELKDARATSEQLEQELQVLLLPKDPDDERNCYLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R++K E +  +DGE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAETRRWKIEIMSTNDGEHGGYKEVIAKVIGDGAYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P + ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAIMPELPEAEMPEINAGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E  +  +E A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAETARLHQEEASTRRNLLGTGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   + D R N+      + + G LD  ++  +
Sbjct: 306 RNRTYNY-PQGRITDHRINLTLYRLDEAMQGKLDMLIEPIV 345


>gi|260584605|ref|ZP_05852351.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
 gi|260157628|gb|EEW92698.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
          Length = 359

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 171/347 (49%), Gaps = 12/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L+    DP +  +      L +E  +L   +   K  Q  + +   
Sbjct: 1   MFDQLDSFIIRYDELSELLSDPDVISDTKRFMELTKEESNLRPKVETFKRYQQVVEEIGD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  + +   + L  +K E        +F  L     D  +  +E+   AGG
Sbjct: 61  TEEMLGEGLDSEMAEMAKEELASLKKEKVELEEKIKFLLLPEDPNDGKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LL MY ++AE + ++ E ++ +     G K   L+I G N +  LK E G 
Sbjct: 121 DEAALFAGDLLSMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++       + D R+D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAEEVEIEL-EDKDIRVDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+     +E  +    + K+ +G
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--KISQEAQSEYDANRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VL G +D+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343


>gi|255533998|ref|YP_003094370.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
 gi|255346982|gb|ACU06308.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/340 (29%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +  +  +P   Q++     L +E + L   +   K  ++ + +     E+
Sbjct: 5   LEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKVYKNVMSNIEANKEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L  + ++ E  +       +     D+ +A  E+  G GG E+ 
Sbjct: 65  LSTEKDAEMREMAKEELDLLLVQQEELEEKVRLMLIPVDPEDAKNAVFEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+ E++ +K E +++ +G   G K   L + G + YG LK E GVHR+ 
Sbjct: 125 LFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   + I++ I+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 185 RVPDTETQGRVHTSAASVAVLPEA-EEIDLYINPADIDLQTSRSGGAGGQNVNKVETKVQ 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH P+G+VV CQQERSQ  N+  A  MLR+KLY++ELQK+  +IA   ++  +      
Sbjct: 244 LTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKNGDIAARRKTMVSTGDRSA 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R  +   + + ++DG + + + A 
Sbjct: 304 KIRTYNY-PQGRVTDHRIGLTLYNLNSIMDGGVQELIDAL 342


>gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 359

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 187/342 (54%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA- 76
               +L  +  K   P +  N  + + L +E +HL   +      ++         EL  
Sbjct: 11  ELEAKLKEVEEKLASPEVANNPKQLQELAKEHKHLAYVVELFNRYENIEKSIKETKELLH 70

Query: 77  -LEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +E+   + +E  +NL+  K ++E   Q   +     D  +  LE+  GAGG E+  +A
Sbjct: 71  SQDEEMRLLAEEELENLKSQKEKLESEIQIALIPKDPNDDKNVILEIRQGAGGDEAALFA 130

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AEK  +K E L +H+ E  GIK    LIKG  AY  LK E GVHR+ R+ 
Sbjct: 131 AELFRMYQRYAEKNGWKVEILSLHENERGGIKEVIALIKGEGAYSKLKYESGVHRVQRVP 190

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P   + +++EI+  D +I+T RASGAGGQHVNTTDSAVRITH
Sbjct: 191 ETESSGRIHTSTATVAVLPEA-EEVDVEINPDDLKIETMRASGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           IPTG+VV CQ ERSQ +N+A+A  +LRA+L +  +  ++E+I +  +S         +IR
Sbjct: 250 IPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRIQQEKIKSERKSQVGTGDRSEKIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R        +++LDG+LD+ +   +   +
Sbjct: 310 TYNF-PQNRVTDHRIGYTSHRINEILDGELDEIIDQLILKDQ 350


>gi|330815385|ref|YP_004359090.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
 gi|327367778|gb|AEA59134.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D     EL
Sbjct: 9   LDQLSNRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRLARGDEATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +     +E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LSDAAMREFAEEEIREARERMARLEAELQKMLLPRDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ + +    E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKERALKVLAARIKDKQ--YHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDLD+ +   ++
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEALMDGDLDEMIATLVS 346


>gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 172/345 (49%), Gaps = 9/345 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               + + L  +  DP +     E + L +E   L   I   ++ Q+         EL  
Sbjct: 8   AVENKYNDLEQRISDPAVIARQKEWQKLTKEHASLAPIIEAYRKYQEVCKTIRGDRELLD 67

Query: 78  E-EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +   D  +     + +  +  E     E      L     D  +  +E+  GAGG E+  
Sbjct: 68  DPSTDTELTAMAKEEIAELTKEQAALEEKLHILMLPKDPHDDKNVIMEIRGGAGGDEAAL 127

Query: 133 WANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           +A  L RMY ++ EK+  +K E +  ++ E  G K     ++G   YG LK E GVHR+ 
Sbjct: 128 FAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFSVEGAGVYGKLKYESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D +EI++   D R+D +RASGAGGQH+N T SAVR
Sbjct: 188 RVPVTEAGGRIHTSTATVAVLPEA-DDVEIDLDMKDVRVDYFRASGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+P+G+VV+CQ ERSQ +N+ +A  +L+A+L +   Q   +       S+   G    
Sbjct: 247 MTHMPSGIVVECQDERSQLENRTKALRVLKARLLDQAQQAAAQEVTEARRSQVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       VL+GDLD+F++A    ++
Sbjct: 307 RIRTYNY-PQGRVTDHRINVTLYKLDAVLNGDLDEFIQALAEARR 350


>gi|323704815|ref|ZP_08116392.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535741|gb|EGB25515.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 353

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 185/345 (53%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP   +++ E K + +E+  L+  +   +E +    D     EL
Sbjct: 5   LKAIEDRYVELSQKLSDPESMKDMDEWKKMAKEQAGLEEIVQKYREYKKVKDDIESTKEL 64

Query: 76  ALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              +D+   + E       ++ +  +   +   L     D  D  +E+ AGAGG E+  +
Sbjct: 65  IEMDDELKDMAEDELKSLEEKEESLLNEIKLLLLPKDPNDEKDVIMEIRAGAGGEEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT +AEK+++K E +  +  E  G K     I G  AY  LK E GVHR+ RI
Sbjct: 125 AYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSIAGKGAYSRLKFESGVHRVQRI 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P V + ++IEI+ +D +ID +R+ G GGQ VNTTDSAVR+T
Sbjct: 185 PTTEAGGRIHTSTATVAVLPEV-EDVDIEINPNDIKIDVFRSGGHGGQSVNTTDSAVRLT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+V+ CQ ERSQ +N+ +A  +LRAKLY  E+ + E+   I  + K ++G G    
Sbjct: 244 HIPTGIVISCQDERSQLQNRERAMKILRAKLY--EMAREEKEREISMTRKLQVGTGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDGDLD+ + A LA  +
Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQ 345


>gi|270264900|ref|ZP_06193164.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
 gi|270041198|gb|EFA14298.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
          Length = 248

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 155/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD I+I+I+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDDIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F
Sbjct: 181 FEMQKKNADKQQMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTNVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|320109111|ref|YP_004184701.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
 gi|319927632|gb|ADV84707.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
          Length = 355

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 176/343 (51%), Gaps = 5/343 (1%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L ++   P + Q+    +  M+  + L+  I   +E ++ +     
Sbjct: 1   MFDRLQQMEVRYQELESELAQPEIVQDQPRYQKAMKAHRDLEILIEKFREFKEVMNGIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTES 130
              +  + D   + +E    L   K E+E   +   L     DS +  LE+ AG GG E+
Sbjct: 61  AHTMLADPDMKEMAEEELSTLMPRKTEIEEELKIMLLPKDPNDSKNVVLEIRAGTGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  + RMY R+AE+ ++K E L   +G   G+K  T + +G   Y  LK E GVHR+
Sbjct: 121 ALFAEEMFRMYLRFAEQHRWKVEVLSEREGAVGGMKEVTAIFEGDQVYSQLKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++++I   D RIDT+ +SG GGQ VNTT SA+
Sbjct: 181 QRVPATETQGRVHTSAITVAVLPEA-EEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYSAI 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+E+++  ++      ++   G   
Sbjct: 240 RITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERVHQLQATARKAQVGSGDRS 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   + D R  +       V++G L   + A +A
Sbjct: 300 EKIRTYNF-PQNRLTDHRIGLTLHQLEYVMEGKLQPVVDALIA 341


>gi|257867023|ref|ZP_05646676.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257873358|ref|ZP_05653011.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257877101|ref|ZP_05656754.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325568363|ref|ZP_08144730.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
 gi|257801079|gb|EEV30009.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257807522|gb|EEV36344.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257811267|gb|EEV40087.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325158132|gb|EGC70285.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
          Length = 357

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    +   +  ++ +       E+
Sbjct: 5   LQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTEEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E +  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LGENLDAEMAEMAKEELSDLKKEKDVLEERIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E ++ +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAENQGWKVEVMDANVTGIGGYKEVIMMITGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I++ D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIDIADKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIAVAMQDERSQLKNREKAMKVLRARVYD--QMQQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIVYDQ 347


>gi|197335699|ref|YP_002155207.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
 gi|197317189|gb|ACH66636.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
          Length = 248

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 191/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S
Sbjct: 61  GATVRIAGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 YELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|24638472|sp|P96314|RF2_BACFI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 294

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 138/282 (48%), Positives = 191/282 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L    G  D +   +R++ L+     P  W +   A+ ++ E   L   ++   E+
Sbjct: 13  MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++  +  +  EL  EE D  + +E    ++ +   +   + + LLS   D N+A LE+H
Sbjct: 73  EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW+E+R FK E ++   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EI+I   D ++DTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +NTTDSA+RITH+PT  VV CQ ERSQ KN+ QA  ML+AKL
Sbjct: 253 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 294


>gi|206603661|gb|EDZ40141.1| Peptide chain release factor 1 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 361

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 187/342 (54%), Gaps = 4/342 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   ++ K  DP + +N      L R++  L   +S  +     +     L EL
Sbjct: 14  LESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSIIVSLYENYLRIIDQQKDLQEL 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
             + D   ++ +    L     +VE +  +S+L   E DS + +LE+ AGAGG E+  +A
Sbjct: 74  RQDPDFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+ E++ F+ E +E +D E  G +   + ++G  A+  LK E GVHR+ R+ 
Sbjct: 134 RELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P   + ++++I   D RIDT+ AS AGGQ VNTT SAVRITH
Sbjct: 194 VTEAGGRIHTSTVTVAMIPEASE-VDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           +PT +VV CQ ERSQ KNKA+A  +LRA+L E E  ++ E+IA+  +S         +IR
Sbjct: 253 LPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNEQIASDRKSQVGTGDRSERIR 312

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R  +       V++G++D F+ A  A ++
Sbjct: 313 TYNF-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQER 353


>gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
 gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
          Length = 294

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 146/289 (50%), Positives = 199/289 (68%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   +LEL   E D ++L E   NL ++  E++  + E LLSG  D+  A L ++AGA
Sbjct: 1   MEDTKAILELLELETDDALLAEAQTNLTQLNKELDRWELEQLLSGTYDAKGAVLTINAGA 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGT++QDWA++LLRMYTRWAE   +K    E+  G+EAGIKSATL I G  AYG+LK E+
Sbjct: 61  GGTDAQDWADLLLRMYTRWAENHGYKVHLAELSPGDEAGIKSATLEIDGLRAYGYLKAEK 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVRISP+++N +R TSF+ + V P VD+++E+EI E D  I T RA G GGQ+VN 
Sbjct: 121 GTHRLVRISPFNANGKRQTSFAGVEVMPAVDNTVELEIPEKDLEITTSRAGGKGGQNVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E
Sbjct: 181 VETAVRIVHIPTGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEIRGDMVE 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             WG QIR+YV  PYQMVKDLRT++E T+ +DVLDG+LD F++A L  +
Sbjct: 241 AAWGNQIRNYVFHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYLRQE 289


>gi|224533030|ref|ZP_03673636.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
 gi|224512024|gb|EEF82419.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
          Length = 269

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 138/266 (51%), Positives = 186/266 (69%), Gaps = 1/266 (0%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                 ++ + +     S    E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE++
Sbjct: 2   EIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAERK 61

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+S
Sbjct: 62  KYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFAS 120

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +RS
Sbjct: 121 VFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRS 180

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD RT
Sbjct: 181 QHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRT 240

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
             E ++ + V+DG++D+F++  L  K
Sbjct: 241 KFENSNTTSVMDGNIDNFIEEYLKWK 266


>gi|241763794|ref|ZP_04761840.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
 gi|241366926|gb|EER61331.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
          Length = 362

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 177/337 (52%), Gaps = 3/337 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          Q R  D     E+
Sbjct: 9   LERYAQRLGELDFLLSREDIMADMAQYRTISREHAEVTQIAGRYARYQQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE   + +   L++E +    LL     D+ +A++E+ AG GG ES  +A
Sbjct: 69  LADPDMAEMAQEEITSAEAELLQLEDELQRLLLPKDPDDARNAFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A++  +K E +  +  E  G K   L I+G + YG LK E G HR+ R+ 
Sbjct: 129 GDLTRMYMRYADRVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   I+++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIR 313
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R    A + +          +IR
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLIGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+       V+DGDL D ++A 
Sbjct: 309 TYNF-PQGRLTDHRINLTLYKLQYVMDGDLADVLQAL 344


>gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
 gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
          Length = 308

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 138/299 (46%), Positives = 197/299 (65%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   ++ Q  + D   ++EL   E D S+L E   NL R+  +++  + + LLS   D N
Sbjct: 1   MQQYQQWQKTIEDTDAIVELLELESDESLLAEAESNLTRLNHDLDRWELQQLLSAPYDKN 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A L ++AGAGGT++QDWA MLLRMYTRW E   +K    E+ +G+EAGIKS TL I+G 
Sbjct: 61  GAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAHGYKVYLAELSEGDEAGIKSVTLEIEGR 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E+G HRLVRISP+++N +R TSF+ + + P++D  + +EI E D  + T RA
Sbjct: 121 YAYGYLKCEKGTHRLVRISPFNANGKRQTSFAGVEIMPMIDQGVHLEIPEKDLEVTTSRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R + 
Sbjct: 181 GGKGGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                    E  WG QIR+YV  PYQMVKDLRT+ E T+  DV++G+LD F++A L  +
Sbjct: 241 IAEIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTSEETTAIDDVMNGELDRFIQAYLRQE 299


>gi|288574777|ref|ZP_06393134.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570518|gb|EFC92075.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 358

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 14  FDWDNAVQRL----SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
              D+ +Q +      +  K  DP +  N  E + L ++   L   +   +E +    + 
Sbjct: 1   MKLDDKLQEIAATHEEIEHKMADPSVTSNPKELQSLGKKHAELSEIVEAYEEYKRIRSEL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125
                L L+ DD  + Q   + +  ++  +E ++       L     D     +E+ AG 
Sbjct: 61  EEAKAL-LDSDDPEMAQLAKEEVHSLEPLLEEQEKKVTLLLLPKDPNDDKSVMVEIRAGT 119

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A+ L RMY+R+AE+R++  E L+ ++ E  G K     + G  AY  LK E 
Sbjct: 120 GGDEAALFASDLFRMYSRFAEQRRWSVEILDANETEIGGYKEIVFKVDGQGAYSDLKYES 179

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS +++ V P   +  ++E+ + D +IDTYR+SGAGGQHVN 
Sbjct: 180 GVHRVQRVPATESGGRIHTSAATVAVLPEA-EEFDVEVRQEDLKIDTYRSSGAGGQHVNM 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKT 304
           TDSAVRITH+PTG+VV CQ ERSQ KN+A+A   LR KLY++E +KR+   A   +    
Sbjct: 239 TDSAVRITHLPTGIVVTCQDERSQIKNRARAMAFLRTKLYDMEQRKRQDAEAQERKGQIG 298

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +IR+Y   P   + D R  +        + G + + ++A    ++
Sbjct: 299 SGDRSERIRTYNF-PQNRITDHRIGLTLYKLDAAMGGSITELVEALRMAEQ 348


>gi|86742401|ref|YP_482801.1| peptide chain release factor 1 [Frankia sp. CcI3]
 gi|119361540|sp|Q2J6M0|RF1_FRASC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86569263|gb|ABD13072.1| bacterial peptide chain release factor 1 (bRF-1) [Frankia sp. CcI3]
          Length = 357

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 176/339 (51%), Gaps = 12/339 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + +  +  DP +  +  +A+ L R    L   +   +E+     D       
Sbjct: 5   LDGLIAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELDRVEGDLAAAR-- 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            L   D S   E  D  + +    +  +   +     D+ DA LEV AGAGG ES  +A 
Sbjct: 63  ELALLDPSFRDEVQDLGEELARLNDRLRAYLVPIDPDDARDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+R +KTE L+ +  +  G +  ++ +K       G   YG L+ E GVH
Sbjct: 123 DLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGPAGPGDGVYGRLRFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI  +D RID +R+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLPEA-EEVDVEIDPNDLRIDVFRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITHIPTGVVV CQ E+SQ +NK  A  +LRA+L     +K E  A++  +S+   + 
Sbjct: 242 AVRITHIPTGVVVSCQNEKSQLQNKESALRILRARLLGAAREKAESEASLARASQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              ++R+Y       + D R   +  +   VLDG+LD+ 
Sbjct: 302 RSERVRTYNFAE-NRISDHRVGYKAHNLDQVLDGELDEV 339


>gi|295836498|ref|ZP_06823431.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
 gi|197699008|gb|EDY45941.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
          Length = 357

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 173/346 (50%), Gaps = 14/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L     DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 5   VEELIGEHAELERTLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIATAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E     +R +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AAE--DPEFAAEIKQLDERREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK---------GPNAYGWLKGEQG 186
            LLRMY R+AE+  +KTE L+  + E  G K   + +K         G   +  +K E G
Sbjct: 123 DLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWARMKYEGG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VNTT
Sbjct: 183 VHRVQRVPSTESQGRIHTSAAGVLVTPEA-EEVDVEINPNDLRIDVYRSSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305
           DSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+   
Sbjct: 242 DSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRSQVRT 301

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A +
Sbjct: 302 VDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQACV 346


>gi|218960517|ref|YP_001740292.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729174|emb|CAO80085.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 355

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 186/342 (54%), Gaps = 8/342 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
               L  +  +  DP +  +  + +  +R  + L    +  K  Q        +  L   
Sbjct: 10  LENELKEMQEQISDPAVINDAQKYRDCLRRFKELREINAAWKHYQTLKKHIEEVNALEKT 69

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E+D  +L    D  + ++ ++E  + +     + +   D+ +A +E+ AG GG E+  +A
Sbjct: 70  ENDPEMLDLIKDEERSLQQQLEQTELKLKDLLIPADPNDAKNAIVEIRAGTGGEEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+ +AE + +K E + ++  E  G K     + G + Y +++ E GVHR+ RI 
Sbjct: 130 ADLFRMYSYYAEMKGWKLEVISMNQTELGGYKEIIFQLSGKDVYSYMRFESGVHRVQRIP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS  ++ V P   + I+I+I ESD RID YR++G GGQ VNTTDSAVRITH
Sbjct: 190 VTESSGRIHTSAVTVAVLPEA-EDIDIDIQESDLRIDVYRSTGHGGQSVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIR 313
           +PTG+VV CQ E+SQ KNKA+A  +LR++L + E+ ++E+  A   ++  +      +IR
Sbjct: 249 LPTGIVVTCQDEKSQIKNKAKALKVLRSRLLDEEISRQEQEIAKARKAQVSTGDRSAKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT-LAIK 354
           +Y   P   V D R N+   +    L G++++F++A  LA +
Sbjct: 309 TYNF-PQSRVTDHRINLTSYNLDSFLAGNIEEFIQALRLAWR 349


>gi|260663282|ref|ZP_05864173.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
 gi|260552134|gb|EEX25186.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
          Length = 362

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 109/355 (30%), Positives = 177/355 (49%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            +  +FD       R   LN    DP +  +      L +E   L   +    E ++   
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQ 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHA 123
                 E+  EE D  +++ T + L   K        + E LL      D  +  +E+  
Sbjct: 62  TIKDDTEMLREESDPDLVEMTKEELNETKERQAQLQDELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+
Sbjct: 182 ENGAHRVQRIPATESAGRVHTSTATVGVMPEA-EDVDVDLDPKDIRVDVYRSSGAGGQHI 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+    +++E +      K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDY--YQQQEQSEYDAQRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +   +
Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 352


>gi|295397091|ref|ZP_06807203.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
 gi|294974683|gb|EFG50398.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
          Length = 357

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ + R + +     DP +  +    + + +E   L   +      +D +       EL
Sbjct: 6   LDSFIARYAEVTELMSDPDVINDNQRFRAISKEEADLRPKVETFSHYKDVIQAIEDTEEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L+ +K E E  + E     + S   D  +  +E+   AGG E+Q
Sbjct: 66  LAESSDDEMTELAKEELKELKAERESLEEEIKRLMIPSDPNDDKNIIMEIRGAAGGDEAQ 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY+R+A  + ++ E +E    +  G K  TL I+G   Y  LK E G HR+ 
Sbjct: 126 LFAGDLYEMYSRYATSQGWRVEVIESSSNDIGGFKEITLQIQGDKVYSKLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P + + I+ ++ E D RID YRASGAGGQHVN T SAVR
Sbjct: 186 RVPDTESQGRVHTSTATVGVMPEL-EDIDFDLDEGDIRIDIYRASGAGGQHVNKTSSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           +TH PTG+ V  Q +RSQ +NK +A  +LR+++YE +  +++ E  +  ++         
Sbjct: 245 LTHEPTGIQVAMQDQRSQQQNKDKAMMILRSRVYEKIASEQQNEYDSQRKNLVGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       ++ G+LD+ + A L   +
Sbjct: 305 RIRTYNY-PQNRVTDHRIGLTIQKLDRIMTGELDEIVDALLLADQ 348


>gi|228474912|ref|ZP_04059641.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
 gi|228271144|gb|EEK12524.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
          Length = 358

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 189/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    +K E+    E  +F  +     D  D  +E+ A AGG
Sbjct: 61  IDEMLTETDDKEEIEMLKEEALGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMYT++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIE+   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG ++    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHIPTG-IIATSSEKSQIQNREKALKVLKARLYDMKL--QEEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|124515209|gb|EAY56720.1| Peptide chain release factor 1 [Leptospirillum rubarum]
          Length = 361

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 187/342 (54%), Gaps = 4/342 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   ++ K  DP + +N      L R++  L   +S  +     +     L EL
Sbjct: 14  LESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSAIVSLYEHYLRIIDQQKDLQEL 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
             + +   ++ +    L     +VE +  +S+L   E DS + +LE+ AGAGG E+  +A
Sbjct: 74  RQDPEFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+ E++ F+ E +E +D E  G +   + ++G  A+  LK E GVHR+ R+ 
Sbjct: 134 RELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P   + ++++I   D RIDT+ AS AGGQ VNTT SAVRITH
Sbjct: 194 VTEAGGRIHTSTVTVAMIPEASE-VDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           +PT +VV CQ ERSQ KNKA+A  +LRA+L E E  ++ E+IA+  +S         +IR
Sbjct: 253 LPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNEQIASDRKSQVGTGDRSERIR 312

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R  +       V++G++D F+ A  A ++
Sbjct: 313 TYNF-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQER 353


>gi|238923860|ref|YP_002937376.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
 gi|259585240|sp|C4Z911|RF1_EUBR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238875535|gb|ACR75242.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
          Length = 358

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 116/349 (33%), Positives = 183/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +     L     +P +  +    K LM+E+  L   +   K+ ++   +   
Sbjct: 1   MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L+  K +VE  + +           D  +  +E+ AGAGG
Sbjct: 61  SLAILDEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +K E L+  +    G+KS   ++KG  AY  LK E GV
Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS  S+ V P   + ++++I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEA-EDVDVKIDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR KLY++ELQK++   A    S     
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +L+GD+ + + A +A  +
Sbjct: 300 DRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|314935933|ref|ZP_07843283.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655939|gb|EFS19681.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 358

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 189/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    +K E+    E  +F  +     D  D  +E+ A AGG
Sbjct: 61  IDEMLTETDDKEEIEMLKEEASGLKGELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMYT++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIE+   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG ++    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHIPTG-IIATSSEKSQIQNREKALKVLKARLYDMKL--QEEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|315641825|ref|ZP_07896829.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
 gi|315482500|gb|EFU73039.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
          Length = 357

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    ++  +  ++ +       EL
Sbjct: 5   LQAIADRYEELGELLSDPAVVSDTKRFMELSKEEANTRETVATYRRYKEVVQGIADAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E E  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LGENLDAEMAELAKEELSDLKKEKEVLEDTIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+AE + ++ E ++ +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQRYAESQGWRVEVMDANITGIGGYKEVIMMITGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+++++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVELDLADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    + E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--QLQHEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|193211744|ref|YP_001997697.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
 gi|238692678|sp|B3QRH7|RF1_CHLP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193085221|gb|ACF10497.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
          Length = 357

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   +   +  +  DP +  +    + L +E   L   +      +        
Sbjct: 1   MFDKLQSIKDKYLTIEQQLSDPEVAADQNRFRKLNKEYSGLREIVRAYDNWRSAKQQLDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +   E+D  +    +   + ++  +   +       L   EAD+ +A +E+ AG GG
Sbjct: 61  TLAMQKSEEDPEMRALAAAEAEELQERLPELEQNLKILLLPKDEADTRNAIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ +  + L++ +G   G  K  +L + G + YG LK E G
Sbjct: 121 DEAGLFAADLMRMYQRYAERQGWSCQTLDVSEGSVPGSLKEVSLEVSGHDVYGILKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D ++DT+R+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLPEA-EEVDVEIRKDDLQMDTFRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY++++ ++ +       S    
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKITEQLQSRADLRRSMVAT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R      +   V+ G+L+  + A 
Sbjct: 300 GDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQVMQGELEPIIDAL 343


>gi|153005568|ref|YP_001379893.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
 gi|152029141|gb|ABS26909.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
          Length = 309

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 155/295 (52%), Positives = 206/295 (69%)

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           +    ++  L D   L ELA E  D +  QE +   + +  ++E  +F+ +LSGE D   
Sbjct: 3   AAYARVRRSLDDAEALAELADEARDEATRQEAAQQCEVVAKDLEALEFQKMLSGEHDRAG 62

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A +EV +GAGG E+ DWA ML RMYTR+ E+R +  E  ++  GEEAGI  A+ + +G  
Sbjct: 63  AIVEVKSGAGGVEAMDWAAMLYRMYTRYCERRGWSVEPADLVAGEEAGISQASFIARGEF 122

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AYG+LK E+GVHRLVRISP+D  +RR TSF+++ V P ++D I ++I E+D RIDTYR+S
Sbjct: 123 AYGFLKAERGVHRLVRISPFDQAARRQTSFAAVDVTPEIEDDIVVDIKEADVRIDTYRSS 182

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQ VN TDSAVR+TH+PTG+VV  Q ERSQ KN+  AW +LRAKLYELE +KR E  
Sbjct: 183 GAGGQKVNKTDSAVRLTHLPTGIVVAVQNERSQQKNRGVAWKILRAKLYELEEKKRAEAR 242

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +  E++K +I +G QIRSYVLQPY+MVKDLRT +E     DVLDGDLD F++  L
Sbjct: 243 DAVEATKKDIDFGSQIRSYVLQPYRMVKDLRTGVETGKVDDVLDGDLDGFIQPYL 297


>gi|309390220|gb|ADO78100.1| bacterial peptide chain release factor 1 (bRF-1) [Halanaerobium
           praevalens DSM 2228]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 183/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V +   +N K  DP +  +  + + L+++   L   +   KE +          E+
Sbjct: 11  LDKLVAKYKQMNKKLSDPEVINDSDKYQKLLKKHAKLKKIVDKYKEYKAAKEGIAEAEEM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              +DD  +     + +  +K + E  Q       L     D  +  +E+ AGAGG E+ 
Sbjct: 71  MELDDDPEMQALFEEEIAELKPKKEKLQEQLPIMLLPDDPNDEKNVIVEIRAGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +K + +  ++    G K     I+G + + +LK E GVHR+ 
Sbjct: 131 LFAADLYRMYTRYAEGKGWKVDLMSANESGTGGFKEIIFTIEGTDIFKYLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + +++EI  +D  IDT+R+SG GGQ VNTTDSA+R
Sbjct: 191 RVPSTESSGRIHTSTATVAVLPEA-EEVDVEIETNDLTIDTFRSSGPGGQSVNTTDSAIR 249

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH PTG+ V CQ E+SQHKNKA+A  +LRA+L E + Q++++  +    S+   G    
Sbjct: 250 ITHEPTGLTVSCQDEKSQHKNKAKAMKILRARLQEKKEQEKQKERSEARKSQVGTGDRSE 309

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R N+       +LDG+L+  ++A +
Sbjct: 310 KIRTYNF-PQGRVSDHRINLTIHQLDKILDGELEPVVEALI 349


>gi|29377042|ref|NP_816196.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227519760|ref|ZP_03949809.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227554052|ref|ZP_03984099.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229549320|ref|ZP_04438045.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255972029|ref|ZP_05422615.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255975086|ref|ZP_05425672.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256616929|ref|ZP_05473775.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256763197|ref|ZP_05503777.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256853870|ref|ZP_05559235.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256957798|ref|ZP_05561969.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256961203|ref|ZP_05565374.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256963678|ref|ZP_05567849.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|257079736|ref|ZP_05574097.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|257081918|ref|ZP_05576279.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|257084460|ref|ZP_05578821.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|257087541|ref|ZP_05581902.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|257090700|ref|ZP_05585061.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257416748|ref|ZP_05593742.1| peptide chain release factor 1 [Enterococcus faecalis AR01/DG]
 gi|257419965|ref|ZP_05596959.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|293384152|ref|ZP_06630046.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|293386966|ref|ZP_06631535.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294779688|ref|ZP_06745078.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|300861212|ref|ZP_07107299.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|307270729|ref|ZP_07552020.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|307271624|ref|ZP_07552895.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|307276806|ref|ZP_07557917.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|307285597|ref|ZP_07565736.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|307290429|ref|ZP_07570344.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|312899933|ref|ZP_07759251.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|312905241|ref|ZP_07764361.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|312907897|ref|ZP_07766880.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|312953588|ref|ZP_07772425.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|312978574|ref|ZP_07790312.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|46576782|sp|Q831F6|RF1_ENTFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29344508|gb|AAO82266.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227072848|gb|EEI10811.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227176800|gb|EEI57772.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229305557|gb|EEN71553.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255963047|gb|EET95523.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255967958|gb|EET98580.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256596456|gb|EEU15632.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256684448|gb|EEU24143.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256710813|gb|EEU25856.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256948294|gb|EEU64926.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256951699|gb|EEU68331.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256954174|gb|EEU70806.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|256987766|gb|EEU75068.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|256989948|gb|EEU77250.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|256992490|gb|EEU79792.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|256995571|gb|EEU82873.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|256999512|gb|EEU86032.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257158576|gb|EEU88536.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG]
 gi|257161793|gb|EEU91753.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|291078632|gb|EFE15996.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|291083636|gb|EFE20599.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294453242|gb|EFG21654.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|295113546|emb|CBL32183.1| bacterial peptide chain release factor 1 (bRF-1) [Enterococcus sp.
           7L76]
 gi|300850251|gb|EFK78001.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|306498622|gb|EFM68124.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|306502821|gb|EFM72086.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|306506443|gb|EFM75602.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|306511502|gb|EFM80501.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|306513039|gb|EFM81680.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|310625988|gb|EFQ09271.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|310628426|gb|EFQ11709.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|310631478|gb|EFQ14761.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|311288723|gb|EFQ67279.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|311292929|gb|EFQ71485.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|315025302|gb|EFT37234.1| peptide chain release factor 1 [Enterococcus faecalis TX2137]
 gi|315030387|gb|EFT42319.1| peptide chain release factor 1 [Enterococcus faecalis TX4000]
 gi|315032691|gb|EFT44623.1| peptide chain release factor 1 [Enterococcus faecalis TX0017]
 gi|315035852|gb|EFT47784.1| peptide chain release factor 1 [Enterococcus faecalis TX0027]
 gi|315143714|gb|EFT87730.1| peptide chain release factor 1 [Enterococcus faecalis TX2141]
 gi|315148532|gb|EFT92548.1| peptide chain release factor 1 [Enterococcus faecalis TX4244]
 gi|315150059|gb|EFT94075.1| peptide chain release factor 1 [Enterococcus faecalis TX0012]
 gi|315151855|gb|EFT95871.1| peptide chain release factor 1 [Enterococcus faecalis TX0031]
 gi|315159264|gb|EFU03281.1| peptide chain release factor 1 [Enterococcus faecalis TX0312]
 gi|315161810|gb|EFU05827.1| peptide chain release factor 1 [Enterococcus faecalis TX0645]
 gi|315168548|gb|EFU12565.1| peptide chain release factor 1 [Enterococcus faecalis TX1341]
 gi|315170191|gb|EFU14208.1| peptide chain release factor 1 [Enterococcus faecalis TX1342]
 gi|315172490|gb|EFU16507.1| peptide chain release factor 1 [Enterococcus faecalis TX1346]
 gi|315574712|gb|EFU86903.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B]
 gi|315579264|gb|EFU91455.1| peptide chain release factor 1 [Enterococcus faecalis TX0630]
 gi|315580976|gb|EFU93167.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A]
 gi|323481494|gb|ADX80933.1| peptide chain release factor 1 [Enterococcus faecalis 62]
 gi|327535788|gb|AEA94622.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF]
 gi|329578086|gb|EGG59499.1| peptide chain release factor 1 [Enterococcus faecalis TX1467]
          Length = 357

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +    +   +  +  +       EL
Sbjct: 5   LQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E E  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E LE +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIE+++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--QIQQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.]
          Length = 363

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 172/342 (50%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A  R   L     DP   ++    +  +RE   L   ++  +  ++        + L
Sbjct: 9   IEGAEVRFMELEMLLSDPDTIRDREAYQKYVREHSALSKIVAIYRSYKNINEQIEESISL 68

Query: 76  ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  I +   D ++ +  K E   KQ   LL    E D  +  LE+ AG GG E+ 
Sbjct: 69  LKNE-DPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R +K E L        G+K    LI+G  AY   K E G HR+ 
Sbjct: 128 LFATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFKYESGTHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +E++I   + ++D YR++G GGQ VNTTDSAVR
Sbjct: 188 RVPVTEAQGRIHTSAVTVAVLPEA-EEVELDIDPGEIKVDVYRSTGPGGQSVNTTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK++A  +LRA+L  L+    E+        K +IG G  
Sbjct: 247 ITHLPTGLVVTCQDEKSQFKNKSKAMKVLRARL--LDNITMEQNQKRSAERKHQIGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +L+G++D+ +   
Sbjct: 305 SERIRTYNF-PQSRVTDHRIGLTLYKLEYILEGNIDEIISEL 345


>gi|157145532|ref|YP_001452851.1| peptide chain release factor 1 [Citrobacter koseri ATCC BAA-895]
 gi|166223546|sp|A8AG02|RF1_CITK8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157082737|gb|ABV12415.1| hypothetical protein CKO_01275 [Citrobacter koseri ATCC BAA-895]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKGEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIV 345


>gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
 gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
          Length = 358

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 180/347 (51%), Gaps = 9/347 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD      +R   L T    P + Q+    +   +E   L   I+ ++E    L D +
Sbjct: 2   AMFDKMKETEERYRELETFLGQPEIIQDQKRFQKYAKEHSDLTPIITVLRE-HQALQDEI 60

Query: 71  ILLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
              +  L++ D  I +   + ++    R++   +      L     D  +  LE+ AG G
Sbjct: 61  AESQSLLQDPDPEIKKLAKEEIEGLNDRLERTADELTVLLLPKDPNDEKNILLEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE R++KTE L  +     G K   +LI+G   +  LK E G
Sbjct: 121 GEEAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLIEGHRVFSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ V P   + +++EI   D RID YR+SG GGQHVNTT
Sbjct: 181 VHRVQRVPETEAQGRIHTSAVTVAVLPEA-EEVDVEIKPEDLRIDVYRSSGHGGQHVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTE 305
           DSAVRITH+PTG+VV CQ E+SQHKNKA+A  +LR+++ +LE   +   I+   ++    
Sbjct: 240 DSAVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQHSRISEERKTMVGT 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                +IR+Y   P   V D R  +      D L GDL+  ++  + 
Sbjct: 300 GDRSERIRTYNF-PQGRVTDHRIGLTLYKLDDFLQGDLNLIIEPLIT 345


>gi|269121056|ref|YP_003309233.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
 gi|268614934|gb|ACZ09302.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
          Length = 359

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 189/347 (54%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V++   L     DP +  +  +     +    +++ +   K  +D+  +   L E 
Sbjct: 5   LDDVVKKHEELTQLLMDPVVTSDPKKIMEYNKALNSINDVVEKYKYYKDKKEELASLKED 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + ++ ++ E+       +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LKNEKDNEMKEMILEEIKNVEEEIPNIEEELKILLLPQDPNDEKNVIMEIRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RM++R+AE+ K+K E ++ +D    G+K    LIKG  AY  LK E GVHR+ 
Sbjct: 125 LFAYDVFRMFSRYAERNKWKVEVIDRNDIGVGGLKEIVFLIKGKGAYSKLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P +DD  ++EI+  D ++DTYRASGAGGQHVNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTITVAVLPEIDDVSQVEINPGDLKVDTYRASGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q ERSQ KN+ +A  +L +K+YE+E+   E+   +    + ++G G  
Sbjct: 245 ITHIPTGIVVTSQDERSQLKNRERAMKVLASKIYEMEV--EEQRKTVESERRLQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VLDGDL + + A  A  +
Sbjct: 303 SEKIRTYNF-PQGRVTDHRIKLTLHKLDQVLDGDLVELIDALTAYAQ 348


>gi|289643112|ref|ZP_06475242.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
 gi|289507076|gb|EFD28045.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
          Length = 356

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 182/345 (52%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L ++  DP +  +   A+ L R    L  A+   +E+     D     E 
Sbjct: 5   LDALLTEHAELESRLADPSVHADPALARSLGRRYAELTPAVETARELDRVAADLATAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D S   E ++     +      +   + +   D+ DA LE+ AGAGG ES  +A 
Sbjct: 65  AAE--DTSFRAEVAELEAEQETLRNRLRAHLVPTDPDDARDAILEIKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            LLRMY R+AE+R ++TE L+ +  +  G +  ++ +K         +G L+ E GVHR+
Sbjct: 123 DLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKAGRGASEGVFGRLRFEGGVHRV 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V P   D +E++I  +D RID YR+SG GGQ VNTTDSAV
Sbjct: 183 QRVPVTESAGRIHTSAAGVLVLPEAAD-VEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAV 241

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWG 309
           RITH+P+G+VV CQ E+SQ +NK  A  +LRA+L  +  ++ +  A+   +S+   +   
Sbjct: 242 RITHLPSGLVVSCQNEKSQLQNKESALRILRARLLSVARERAQAEASAARASQVRTVDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y       + D R   +  +   VLDG+LDD + A +A  
Sbjct: 302 ERVRTYNFAE-NRISDHRVGYKAYNLDQVLDGELDDVLNALIAAD 345


>gi|56413303|ref|YP_150378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362228|ref|YP_002141865.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81599266|sp|Q5PCQ9|RF1_SALPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690759|sp|B5BI75|RF1_SALPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56127560|gb|AAV77066.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093705|emb|CAR59177.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDS++R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSSIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|291520820|emb|CBK79113.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus catus
           GD/7]
          Length = 357

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 188/352 (53%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   +  +  DP +  +    + LM+E+  L   +    E ++       
Sbjct: 1   MFDRLDDILIRYQQIMEELNDPDVVNDQKHFRKLMKEQSDLQPLVEKYTEYKNTKQTIED 60

Query: 72  LLELALEEDDCSIL-------QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            LE+   EDD  +         E   N+ +I+ E++      +     D  +  +E+ AG
Sbjct: 61  SLEMLEVEDDEEMKEMLKEELSEAKSNIAKIEQELKVL---LIPKDPMDEKNVIVEIRAG 117

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+++AE +++K E +++ +    G K    ++ G + Y  +K E
Sbjct: 118 AGGDEAALFAAELFRMYSKYAESKRWKIEMMDVSENGIGGFKECVFMVSGDHVYSRMKFE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ + P   + +++EI  +D RID  RASG GGQ VN
Sbjct: 178 SGVHRVQRVPETESGGRIHTSTVTVAIMPEA-EEVDVEIDMNDVRIDVMRASGNGGQCVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSK 303
           TTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KL E+E++K+  E A + ++  
Sbjct: 237 TTDSAVRLTHNPTGIVIYSQTEKSQLQNKEKAFRLLRSKLLEIEIEKKHAEEAALRKNQV 296

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                  +IR+Y   P     + R  +      D+++GDLD+ + + +A  +
Sbjct: 297 GTGDRSEKIRTYNF-PQGRCTEHRIKLTLYRLGDIMNGDLDEIIDSLIAADQ 347


>gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
          Length = 358

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +           ++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LQQLGDRLEEVTHLLGQSEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +    E++ +  + LL  +AD   + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       V+DGDL +   A +A
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIA 346


>gi|227890652|ref|ZP_04008457.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
 gi|227867590|gb|EEJ75011.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
          Length = 360

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 190/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDR 65
           +  LFD    ++ R   L     DP +  +      L +E   L   +      KE+  +
Sbjct: 1   MDKLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           + D+  +L   L+++  S+++E   N +  K+++E + +   L     D  +  +E+   
Sbjct: 61  ISDDEEMLSDGLDDEMASLVKEELSNAKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E
Sbjct: 121 AGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N
Sbjct: 181 SGAHRVQRIPVTESAGRVHTSTATVVVMPE-EEDVEIELDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+     ++E +    + K+
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDY--YAQQEQSEYDANRKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 298 AVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALILFEQ 350


>gi|325105445|ref|YP_004275099.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
 gi|324974293|gb|ADY53277.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
          Length = 358

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 178/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +    R   +  +  +P   Q++     L +E + L   +    + ++ + +   
Sbjct: 1   MLDKLEAIKLRRDDVERELSNPEATQDMKRFAQLNKEYKDLGLIVDEYYKYKNVVSNIAT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   + L  +  E E  +     +L      D  DA +E+  G GG
Sbjct: 61  NKDILANEKDQELREMAKEELDVLIPEKEEMEAKIRLMLVPKDPGDEKDAIVEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+ E + ++TE LE+ DG   G K     + G + YG LK E GV
Sbjct: 121 DEAAIFAGDLYRMYTRYCEGKGWRTEVLEVTDGTNGGYKEVVFKVSGEDVYGTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++EI+ +D  + T R+ GAGGQ+VN  +
Sbjct: 181 HRVQRVPDTETQGRVHTSAASVAVLPEA-EEVDVEINPADIEMQTSRSGGAGGQNVNKVE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           + V++TH PTG+VV CQ ERSQ  N+ +A  MLR+KLYE EL K  EEIA+  ++  +  
Sbjct: 240 TKVQLTHKPTGIVVVCQVERSQLGNRERAMEMLRSKLYERELAKYNEEIASKRKTMVSTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   V + R  +   +   V++G++ + + A 
Sbjct: 300 DRSAKIRTYNY-PQGRVTEHRIGLTLYNLPAVMNGEIQEILDAL 342


>gi|257462414|ref|ZP_05626828.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|317060078|ref|ZP_07924563.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|313685754|gb|EFS22589.1| peptide chain release factor 1 [Fusobacterium sp. D12]
          Length = 359

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 185/352 (52%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   L+T    P +  +  +     +    L   I   KE +    +   
Sbjct: 1   MFDKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKEEVDF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  +     + L+  + ++    +  +   L     D N+  +E+  GAGG
Sbjct: 61  IKESLKTEKDEDMRVMMQEELKENEDKMPELEKELKILLLPKDPNDDNNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE++K+K E +E  D E   G+K     I+G  AY  LK E G
Sbjct: 121 DEAAIFAGDLFRMYCRYAERKKWKVEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN T
Sbjct: 181 VHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVQIDPKDLKIDTYRSGGAGGQHVNMT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+VQCQ ERSQ KN+ +A   L +KL E+E++K+   + I    + ++
Sbjct: 241 DSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEIEKQR--SEIEGERRLQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +        LDGDLD+ + A +   +
Sbjct: 299 GTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQ 349


>gi|124265716|ref|YP_001019720.1| peptide chain release factor 1 [Methylibium petroleiphilum PM1]
 gi|166223569|sp|A2SD46|RF1_METPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124258491|gb|ABM93485.1| bacterial peptide chain release factor 1 (bRF-1) [Methylibium
           petroleiphilum PM1]
          Length = 359

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 185/344 (53%), Gaps = 3/344 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D  V+RL+ L++   DP + ++    + L RE   +   +   +    R  D    
Sbjct: 6   RLQLDRYVRRLAELDSLLADPAVMRDAGGFRALSREHVEVSGIVERQRRHAQRERDLAAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQ 131
            E+A + +  ++  E + + Q     +  +    LL     D+   +LE+ AG GG ES 
Sbjct: 66  AEMASDPELAAMAAEEAASAQAELDRLATELQRLLLPRDPDDARSVFLEIRAGTGGDESA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE++ ++ E L   D E  G K     I+G   +G LK E G HR+ 
Sbjct: 126 LFAGDLLRMYTRYAERKGWRVELLSASDSELGGYKEVVARIEGDAVFGHLKYESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V    D++ E+ ++ +D RIDTYRASGAGGQHVN TDSAVR
Sbjct: 186 RVPATETQGRIHTSACTVAVLAEPDEAQEVTLNPADLRIDTYRASGAGGQHVNKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+V +CQ +RSQH+NKA+A  +L A+L + +  +R+        S    G    
Sbjct: 246 ITHLPTGLVAECQDDRSQHRNKAKAMAVLAARLRDKDRLERQAREAATRKSLIGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N+       ++DGDLD  +KA +A +
Sbjct: 306 RIRTYNF-PQGRLTDHRINLTLYQLGAIMDGDLDPVVKALVAAR 348


>gi|160902302|ref|YP_001567883.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
 gi|160359946|gb|ABX31560.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
          Length = 356

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 136/349 (38%), Positives = 208/349 (59%), Gaps = 18/349 (5%)

Query: 13  LFDWD-NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D+     +++  L  +  DP++  ++   K L +E   L    +  +  +  L D   
Sbjct: 3   ILDFKGEVKKKIKELEKQLSDPYITNDIENLKKLGQEHSKLSELNTLFESYEQDLEDIKA 62

Query: 72  LLELAL-----EEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGA 125
           L E+       EE+  S+LQE     +  + ++     E L+S  E D  +  +E+ AG 
Sbjct: 63  LREMYENKDVSEEEYQSMLQELEKKEEETRKKI----IEGLVSQDEYDERNIIMEIRAGT 118

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A+ L+RMY R+AE++ +K E L++++ E  GIK+A L IKG  AY  LK E 
Sbjct: 119 GGDEASLFASELMRMYLRYAERKNWKYELLDLNENELGGIKTAILKIKGQGAYRRLKYES 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S+ R HTS +++ V P   D I+++I+E+D RIDTYRASGAGGQ+VN 
Sbjct: 179 GVHRVQRVPQTESSGRIHTSTATVAVLPEATD-IDVQINENDLRIDTYRASGAGGQYVNK 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV CQ ERSQH+NK +A N+LRAKL+E++L   E+ + + +  K++
Sbjct: 238 TDSAVRITHLPTGIVVTCQNERSQHQNKEKALNILRAKLFEIKL--EEQQSQLTQERKSQ 295

Query: 306 IG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IG      +IR+Y   P   V D R        +++LDGDLD+ +   L
Sbjct: 296 IGTAQRSEKIRTYNF-PQNRVTDHRIQYTTHRINEILDGDLDEIIDKLL 343


>gi|257092416|ref|YP_003166057.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044940|gb|ACV34128.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 360

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 188/341 (55%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  L+         +++ E + L RE   +   ++  +       D    L++
Sbjct: 9   LEHLTGRLDELDRMLASGDATRDMDEYRRLSREHAEIAPVVALYQIWSRTRSDLAAALDM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + + E + + +R+    +  Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  VGDPEMRELAEAEVAASKERLPQIEKDLQKLLLPRDAKDERNVFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE+R+++ E +     +  G +     I G + Y  LK E G HR+ R+ 
Sbjct: 129 GNLFRMYTRYAERRRWQVEVISASASDLGGYREIIARIIGSDVYARLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   E++++ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTEAQGRIHTSACTVAVMPEADALEEVQVNPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV+CQ +RSQHKNKAQA ++L A++ +++  +RE+ A+I    ++ +G G    +
Sbjct: 249 LPTGVVVECQDDRSQHKNKAQAMSVLVARIRDMQ--EREQDASIASERRSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       ++DGDLD+ + A  A
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELLGALTA 346


>gi|29829454|ref|NP_824088.1| peptide chain release factor 1 [Streptomyces avermitilis MA-4680]
 gi|46576778|sp|Q82J70|RF1_STRAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29606562|dbj|BAC70623.1| putative peptide chain release factor 1 [Streptomyces avermitilis
           MA-4680]
          Length = 358

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 173/347 (49%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   ++  +  +    D     E 
Sbjct: 5   VEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIETAKEF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               DD     E  D  ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  VA--DDPDFAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  +K E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARMKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPSTESQGRIHTSAAGVLVTPEA-EEVDVEIHANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+  
Sbjct: 242 TDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAMIQACV 347


>gi|224541463|ref|ZP_03682002.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525621|gb|EEF94726.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
          Length = 358

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 174/343 (50%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L     DP +  ++ +     +E+  L+ A +  KE +  L       EL
Sbjct: 8   LQTVEKRYEELTQILMDPSIANDIQKMTQASKEQASLEKAYNLYKEYKALLDGIEEAKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E+D  I +     L+ ++ +        Q E +     D  +  +E+   AGG E  
Sbjct: 68  -LNENDPEIKEMAKMELEELEKKQPIMEHDIQIELIPKDPNDEKNVVMEIRGAAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE + +K E  +    E  G    + +IKG   Y  +K E G HR+ 
Sbjct: 127 IFAGDLFRMYSKYAESQGWKIEIEDAQPSEAGGYSLISFIIKGNGVYSKMKFESGSHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I+I   D RIDTYR+SGAGGQH+N TDSAVR
Sbjct: 187 RVPKTETQGRVHTSTATVLVMPEA-EEVDIDIDPKDLRIDTYRSSGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+V   Q  RSQH N+A+A   LR ++YE +L  REE   +G   + +IG G  
Sbjct: 246 ITHIPTGIVATSQDGRSQHDNRAKAMQSLRTRVYEAKL--REEEEKLGNERRNKIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       +++G L+  + A +
Sbjct: 304 AEKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLEPIIDALI 345


>gi|312879994|ref|ZP_07739794.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
 gi|310783285|gb|EFQ23683.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
          Length = 357

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 119/345 (34%), Positives = 182/345 (52%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +      S + ++  DP L  N+ E   L +    L   ++ ++E +  L       EL
Sbjct: 7   LEEIESTFSEIESRMVDPALSSNLQEMHALGKRHSELSPIVAALREYRGVLRRIQDAREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L  ++ +VE  +       L     D+ D  +E+ AGAGG E+ 
Sbjct: 67  LSQE-DEGLRELAKEELSTLEEQVEPLEQRIKVLLLPQDPNDAKDVVIEIRAGAGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+  + +E L  +D    G K     +KG   Y  LK E GVHR+ 
Sbjct: 126 LFAADLFRMYNRFAEREGWGSELLSTNDTGIGGYKEVVFHLKGTGVYSKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + +++++   D +IDTYRASGAGGQ+VN TDSAVR
Sbjct: 186 RIPVTEAGGRIHTSTATVAVLPEA-EEVDVQVRTEDLKIDTYRASGAGGQYVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV CQ ERSQ KN+ +A  +LR +LY+LELQK++  +A   +          
Sbjct: 245 ITHVPTGLVVTCQDERSQLKNRVKAMQLLRTRLYDLELQKQQAVMAAERKGQVGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R          VLDGDL + ++A    ++
Sbjct: 305 RIRTYSY-PQNRLTDHRIGFTLYKLDQVLDGDLYELVEALTVAEQ 348


>gi|66769665|ref|YP_244427.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|81304380|sp|Q4URB6|RF1_XANC8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|66574997|gb|AAY50407.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 361

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     ++E      D      +
Sbjct: 9   LEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + +   +  ++    Q   LL      D  + +LEV AG GG E+ 
Sbjct: 69  ---RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ 
Sbjct: 126 IFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+R
Sbjct: 186 RVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G  
Sbjct: 246 ITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAKAQTRKLQVGSGDR 303

Query: 311 --QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 304 SQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLL 346


>gi|332140695|ref|YP_004426433.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550717|gb|AEA97435.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 248

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 158/246 (64%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  D ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ DG+ AGIK
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I+G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+I+I+ S
Sbjct: 61  SATLRIQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|78778239|ref|YP_394554.1| peptide chain release factor 1 [Sulfurimonas denitrificans DSM
           1251]
 gi|119361635|sp|Q30NW2|RF1_SULDN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78498779|gb|ABB45319.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 355

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 178/339 (52%), Gaps = 15/339 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R + L      P +  ++     L +ER  L+  +   +E +  +       E+     D
Sbjct: 12  RYNELGEMLSSPDITSDIKRMTTLSKERSSLEKIVEKAQEYKSVISQINDTKEMLY---D 68

Query: 82  CSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
             + +   + L+ +++++   +       L     D  +  +E+ AGAGG E+  +   L
Sbjct: 69  AEMAEMAKEELKELEIQIPILENDIKLLLLPKDPNDDRNIIVELRAGAGGDEAAIFVGNL 128

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
              YTR+A+ + +K E L     +  G K    LI+G   Y  LK E G HR+ R+   +
Sbjct: 129 FEAYTRYADLKDWKVEILSSSPSDAGGYKEIIALIRGEQVYSRLKYEGGTHRVQRVPATE 188

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V P V D +EI+I+E+D +ID  R+SG GGQ VNTTDSAVRITH+PT
Sbjct: 189 SQGRVHTSAITVAVMPEV-DDVEIQINENDLKIDVMRSSGCGGQSVNTTDSAVRITHLPT 247

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRS 314
           G+VV  Q ++SQHKNK +A  +L+A+LY+LE+  +E IA    +   ++G G    +IR+
Sbjct: 248 GLVVTNQDQKSQHKNKEKAMKVLKARLYDLEM--QEAIAKDSANRSAQVGTGDRSGRIRT 305

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           Y   P   + D R  +     ++++ G L D+ ++  +A
Sbjct: 306 YNY-PQNRMSDHRITLTLYRLAEIMQGGLMDEIIEPLIA 343


>gi|257463869|ref|ZP_05628255.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 326

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 154/324 (47%), Positives = 214/324 (66%), Gaps = 1/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +   W +   +  L++        ++  + + + +     +L   +E  D S   E  + 
Sbjct: 2   EEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIE-EEEVLIEFVEAGDESSQVELEEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +++  ++E      LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW   +K+K
Sbjct: 61  HKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCHDKKYK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V
Sbjct: 121 IEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VD+S+E+E+  +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV CQ+ERSQ  
Sbjct: 181 VPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGIVVTCQKERSQLN 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KL ELEL+K+EE     +  ++EIGWG QIRSYV QPY MVKD RT +E
Sbjct: 241 NRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQPYTMVKDHRTGVE 300

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   V+DGDLD+FM   L   K
Sbjct: 301 VGNIKAVMDGDLDEFMNGYLRWNK 324


>gi|319942226|ref|ZP_08016542.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
 gi|319804279|gb|EFW01171.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
          Length = 358

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 181/340 (53%), Gaps = 9/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  ++     P    ++   + L RER  ++  +  +   +    D     EL
Sbjct: 10  LSALSRRLEEIDRMLAAPETAADMNLFRDLSRERGEIEPIVGRLHAYERAESDLAAAQEL 69

Query: 76  ALEEDDCSILQETSD----NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A + +  +   E S      L+RI+ E+       L     D  + +LE+ AG GG ES 
Sbjct: 70  AADPEMKAFAAEESAAATHELERIEQELR---IALLPKDPNDDRNIFLEIRAGTGGDESA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE   ++TE +  ++ E  G K   + I G  AY  LK E G HR+ 
Sbjct: 127 LFAGDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRIIGRGAYSKLKFESGGHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P +D+  E++++ +D RID +RASGAGGQH+  TDSAVR
Sbjct: 187 RVPATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDVFRASGAGGQHIQKTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQ +NKA+A  +L ++LY  ++ ++ E  A+  ++         
Sbjct: 247 ITHLPTGMVVECQDERSQTQNKARAMAVLASRLYAQQVAEQHEREASERKNLIGSGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+       +++GDL++ + A 
Sbjct: 307 RIRTYNY-PQGRVTDHRINLTLYRLEAIMNGDLEEIITAL 345


>gi|113461617|ref|YP_719686.1| peptide chain release factor 2 [Haemophilus somnus 129PT]
 gi|112823660|gb|ABI25749.1| bacterial peptide chain release factor 2 (bRF-2) [Haemophilus
           somnus 129PT]
          Length = 260

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 149/259 (57%), Positives = 195/259 (75%), Gaps = 1/259 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE 
Sbjct: 1   MEKKLAALEFRRMFSGQHDNCDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTEL 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  G+ AG+KSAT+ I G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP 
Sbjct: 61  VEVSSGDVAGLKSATIRIAGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD IEIEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK 
Sbjct: 121 IDDDIEIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   L+AKLYE+E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLKAKLYEMEIMKKNADKQAMEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLAI 353
              VLDGDLD F++A+L  
Sbjct: 240 TQAVLDGDLDRFIEASLKA 258


>gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 362

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 169/340 (49%), Gaps = 3/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     +   +E+E       +     D+N AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIKENKARLVELEDQLNVLMIPKDPNDANAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRIDGEGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+GVVV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    
Sbjct: 246 ITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 306 RIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|206580278|ref|YP_002237908.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288934821|ref|YP_003438880.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|290508964|ref|ZP_06548335.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
 gi|238058716|sp|B5XW51|RF1_KLEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206569336|gb|ACI11112.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288889530|gb|ADC57848.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|289778358|gb|EFD86355.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
          Length = 360

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +  + + L RE   L +      + +    D      +
Sbjct: 9   LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A++EV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E L  ++GE  G K       G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKFSGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|320538900|ref|ZP_08038576.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
 gi|320031060|gb|EFW13063.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
          Length = 361

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +       + L RE   L +      + +    D     E+
Sbjct: 9   LEALQERYEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLKWRQIQGDLATA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L++ K       +  Q   L     D    +LEV AG GG E+ 
Sbjct: 68  MQ--DDPEMREMAQEELKQAKATTKELEQQLQVLLLPKDPDDEGGCFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAETRRWRVEMISANEGEHGGYKEVIAKVSGEGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   +I++SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEVPEAEMPDITQSDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V+ G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEVMAGKLDMLIQPIV 345


>gi|91215788|ref|ZP_01252758.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
 gi|91186254|gb|EAS72627.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
          Length = 316

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 136/307 (44%), Positives = 202/307 (65%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+        +      +  + D  +L E   EE D S   E  +        +E  +F+
Sbjct: 1   MQAINDEKQWVKSFDFAKQLVEDLNVLFEF-FEEGDVS-EDEIKEKYAEALELIEDLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E+D   A L++ AGAGGTES DWA ML+RMY  WA++R FK   L    G+ AGI
Sbjct: 59  NMLSEESDPLTAILQITAGAGGTESCDWAEMLMRMYIMWADRRNFKIRELNHQGGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ 
Sbjct: 119 KTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+ + +  R+ GAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++LY
Sbjct: 179 SEIKWEFARSGGAGGQNVNKVETKAILTHYPSGIVIHNSETRSQLENRQKAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++   +  ES K  I WG QIR+YV+ PY++VKD+RT  E  +  D+++G +D 
Sbjct: 239 EIELKKQQAARSEIESEKKSIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDDIMNGHIDS 298

Query: 346 FMKATLA 352
           F+K+ L 
Sbjct: 299 FLKSYLM 305


>gi|194332966|ref|YP_002014826.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
 gi|238693294|sp|B4S385|RF1_PROA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194310784|gb|ACF45179.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
          Length = 357

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 183/346 (52%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A      L  +  DP +  +    + L +E   L   +               +L +
Sbjct: 5   LESAKDHYIRLEEQLSDPDIIGDQQRFRKLNKEYSDLKEIVQAYDRYISNRRQIEEVLGM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +     +    +  +     +  +   L   EADS +  +E+ AG GG E+ 
Sbjct: 65  LAKESDPEMKALAEEEYNELLADQPELEQQLKLLLLPKDEADSRNVIMEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  LLRMY R+AE+R +K E LE ++    G  K A++ I G + YG +K E GVHR+
Sbjct: 125 LFATDLLRMYQRFAERRGWKCELLEFNEANTPGACKEASMAISGHDVYGIMKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   + ++IEI + D R+DT+R+ G GGQ+VN  ++AV
Sbjct: 185 QRVPETETQGRIHTSAASVAVLPEA-EEVDIEIRKDDLRVDTFRSGGKGGQNVNKVETAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG 309
           RITH P+G+VV CQ+ERSQ +N+ +A  MLRAKLY+ EL  K +E A++ +S  +     
Sbjct: 244 RITHAPSGIVVACQEERSQLQNRERAMKMLRAKLYDRELADKNKERADLRKSMVSSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R      +   +LDG+LDD ++A    ++
Sbjct: 304 AKIRTYNF-PQSRVTDHRIGYTSHALPQILDGNLDDLIEALKLYEQ 348


>gi|145220477|ref|YP_001131186.1| peptide chain release factor 2 [Prosthecochloris vibrioformis DSM
           265]
 gi|145206641|gb|ABP37684.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 300

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 139/297 (46%), Positives = 198/297 (66%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   +++          L LA E  + S  +E   ++  I+ E++  +F ++LSG+ D  
Sbjct: 1   MEGYRKMASDATSCREELTLADELGEESYAEELDASIAAIEAEMDAIEFRNMLSGKDDEG 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + +HAGAGGTE+QDWA ML RMY RWAE++ FK    +   G+ AGIK+ATL I+GP
Sbjct: 61  NAIITIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQAGDGAGIKTATLEIQGP 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+
Sbjct: 121 YAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRS 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVRI H+P+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +  
Sbjct: 181 GGKGGQNVNKVETAVRIKHVPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDAK 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E  K +I WG QIRSYVL   + +KD RTN E+     VLDGD+DDFM A L+
Sbjct: 241 KREVEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNHERFDIETVLDGDIDDFMHAYLS 296


>gi|219850039|ref|YP_002464472.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
 gi|254790871|sp|B8G7K1|RF1_CHLAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219544298|gb|ACL26036.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
          Length = 361

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 121/353 (34%), Positives = 181/353 (51%), Gaps = 16/353 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   QR   L      P +  NV   +   RE++ L++ ++  +E Q      + 
Sbjct: 1   MFDKLEAVAQRYDELTQLMAQPEVATNVTLLQQYAREQRELEDIVTTYREYQAAQR-AIA 59

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E  L+E+D  +     + L   +  +    E  +   L     DS D  +E+  G GG
Sbjct: 60  EAEAMLDENDPELRALAQEELDTQRKRLATLEEQLKVLLLPRDPNDSKDVIMEIRQGEGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE R +K E   + +    GIK     I G  AY  LK E GV
Sbjct: 120 DEAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGV 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P V+++ EIEI   D RID +R++G GGQ VNTTD
Sbjct: 180 HRVQRVPATEARGRIHTSTATVAVLPEVEET-EIEIKPEDLRIDVFRSAGHGGQGVNTTD 238

Query: 248 SAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           SAVRI +    P  +VV CQ  RSQ +N+ +A  +LRA+LY  E +KR+    IG S   
Sbjct: 239 SAVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQR--EIGASRLA 296

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++G G    +IR+Y   P   + D R     ++   VLDG+LD  ++A +   
Sbjct: 297 QVGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALIVYD 348


>gi|86152633|ref|ZP_01070838.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843518|gb|EAQ60728.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 355

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +  +KE    L +      L
Sbjct: 6   LDPFLRRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKVKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|116629883|ref|YP_815055.1| peptide chain release factor 1 [Lactobacillus gasseri ATCC 33323]
 gi|238853674|ref|ZP_04644042.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282851601|ref|ZP_06260966.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311110481|ref|ZP_07711878.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
 gi|122273179|sp|Q042K5|RF1_LACGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116095465|gb|ABJ60617.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833712|gb|EEQ25981.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282557569|gb|EFB63166.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311065635|gb|EFQ45975.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
          Length = 362

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 168/341 (49%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   +   +   ++ +  + +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISSESDDDLVEMAKEENSELEKEVAKLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RVPVTESQGRVHTSTATVAVMPE-YEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q R++     + +        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDKYDAKRKDAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       V++G+LD+ + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINALV 346


>gi|270261428|ref|ZP_06189701.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
 gi|270044912|gb|EFA18003.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
          Length = 361

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +       + L RE   L +      E +    D     E+
Sbjct: 9   LEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQEDLATA-EM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + +++ K       +  Q   L     D    +LEV AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQEEMKQAKAATEELEQQLQVLLLPKDPDDERGIFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++       +    G    
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQEEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDMLIQPIV 345


>gi|290954114|ref|ZP_06558735.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312499|ref|ZP_06803267.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 241

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 145/239 (60%), Positives = 183/239 (76%), Gaps = 1/239 (0%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           +N A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK  TL I+
Sbjct: 1   ANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKIE 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTY
Sbjct: 61  GEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTY 120

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE+ELQKR 
Sbjct: 121 RASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYEMELQKRN 180

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              N  E SK +IGWG QIRSYVL     +KDLRT +E T+   VLDGDLD F++A+L 
Sbjct: 181 AEKNALEDSKADIGWGSQIRSYVL-DQSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 238


>gi|311279353|ref|YP_003941584.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
 gi|308748548|gb|ADO48300.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A++EV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKDKSEQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEVIAKVSGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+ ++ RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAEMPEINPTELRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 345


>gi|262041834|ref|ZP_06015019.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040826|gb|EEW41912.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +  + + L RE   L +      + +    D      +
Sbjct: 9   LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A++EV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELRDAKEKGDQLEQQLQILLLPKDPDDERNAFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE R+++ E L  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIV 345


>gi|152970781|ref|YP_001335890.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895295|ref|YP_002920030.1| peptide chain release factor 1 [Klebsiella pneumoniae NTUH-K2044]
 gi|330009867|ref|ZP_08306623.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
 gi|166223565|sp|A6TAN9|RF1_KLEP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150955630|gb|ABR77660.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238547612|dbj|BAH63963.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328534693|gb|EGF61258.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +  + + L RE   L +      + +    D      +
Sbjct: 9   LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A++EV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE R+++ E L  ++GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAEASTRRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 306 RNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIV 345


>gi|289550267|ref|YP_003471171.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315660273|ref|ZP_07913128.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
 gi|289179799|gb|ADC87044.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315494700|gb|EFU83040.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
          Length = 358

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 188/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  N  + +   +E+  L   +   +E +++  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNNADKLRKYSKEQAELQKTVDVYREYKNKKEELSD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + ++  E DD   ++   +    +K  +    E  +F  +     D  D  +E+ A AGG
Sbjct: 61  IEDMLSETDDKEEIEMLKEESSNLKDALPLLEEKLKFLLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMYT++AE   F+TE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYTKYAEANGFRTEVVEATESDHGGYKEVSFQVSGAGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHIPTG-VIATSSEKSQIQNREKALKVLKARLYDMKL--QEEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|330444669|ref|YP_004377655.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
 gi|328807779|gb|AEB41952.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
          Length = 363

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 178/348 (51%), Gaps = 9/348 (2%)

Query: 13  LFDWDNAVQ---RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +FD     +   RL  +  +   P ++ +  E K L +E   L        ++Q++    
Sbjct: 1   MFDDTKLTEYLSRLEEIEVRLSSPEIFDHPEEYKALSKEHARLSELKEAYAQLQEQEKIL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGA 125
               +    E D  ++    + L   K E E  +   E+LL      D  +  +E+ AG 
Sbjct: 61  ADDKQALSMEKDPEMIAMLEEGLVEGKAETERLRKVLENLLVPPDPDDDLNVIMELRAGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +    +RMY  ++  + +K E L   + +  G K   + I G     +L+ E 
Sbjct: 121 GGEEAALFVGDCVRMYHLYSAAKGWKYEVLSSSESDLKGYKEYVMGISGTGVKRFLQYEA 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   ++  R HTS  ++ + P   +  EI I E D RIDT+RASGAGGQHVN 
Sbjct: 181 GTHRVQRVPETETQGRVHTSAITVAILPEPAEDDEIIIDEKDLRIDTFRASGAGGQHVNV 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGVVV CQ ERSQHKNK +A  +L+A++ + E+QKR++ A+   S++  
Sbjct: 241 TDSAVRITHLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRQKEASAMRSAQVG 300

Query: 306 IG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y       V D R  +   S   V++GDLD    A ++
Sbjct: 301 SGDRSERIRTYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDPITTALVS 347


>gi|269123393|ref|YP_003305970.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
 gi|268314719|gb|ACZ01093.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
          Length = 358

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 178/345 (51%), Gaps = 6/345 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V++   +N       +  +  +     +    +   +      + +        E 
Sbjct: 5   LDEVVEKYEEINRLLMSQEVLSDPKKLMEYNKTLSQMSEIVEKYLLYKSKKEALEQYKEE 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +L+  +  +  I+ E+   + E           D  +  +E+ AGAGG E+ 
Sbjct: 65  VKSEKDEEMLEMLNMEIDTIEEEIPRLEEELKILLLPKDPNDEKNVIVELRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            + + + RM+TR+AE+ K+KTE ++ ++    G+K  T LI G  AY  LK E GVHR+ 
Sbjct: 125 LFVSDIFRMFTRYAERNKWKTEIIDKNEIGVGGLKEITFLISGKGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS  ++ V P +DD  ++ I+ SD +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPDTEASGRIHTSTITVAVLPEIDDVEQVAINPSDLQIDTYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH PTG+VV  Q  RSQ KNK  A  +L +KLYE+E++K+         S+   G    
Sbjct: 245 ITHKPTGIVVTSQDGRSQIKNKEAAMKVLASKLYEIEVEKQRSSVEAERRSQVGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +LDG LD+ + A +A  +
Sbjct: 305 KIRTYNY-PQGRVTDHRIKLTLHRLDAILDGALDEIIDALIAFNQ 348


>gi|257421856|ref|ZP_05598846.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|257163680|gb|EEU93640.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|315155439|gb|EFT99455.1| peptide chain release factor 1 [Enterococcus faecalis TX0043]
          Length = 357

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +    +   +  +  +       EL
Sbjct: 5   LQSIEDRYEELGELLSDPAIISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E E  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E LE +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIE+++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--QIQQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|300214391|gb|ADJ78807.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius
           CECT 5713]
          Length = 360

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 191/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDR 65
           +  LFD    ++ R   L     DP +  +      L +E   L   +      KE+  +
Sbjct: 1   MDKLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           + D+  +L   L+++  S+++E   N++  K+++E + +   L     D  +  +E+   
Sbjct: 61  ISDDEEMLSDGLDDEMASLVKEELSNVKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E
Sbjct: 121 AGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N
Sbjct: 181 SGAHRVQRIPVTESAGRVHTSTATVVVMPE-EEDVEIELDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+     ++E +    + K+
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDY--YAQQEQSEYDANRKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 298 AVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350


>gi|262340849|ref|YP_003283704.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272186|gb|ACY40094.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 365

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 137/353 (38%), Positives = 226/353 (64%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +++ +  +   D     L     +  +P+ W++  ++K  +R    +  +I    ++
Sbjct: 10  ISEKIHRMHDVLKIDQIKAILDKEQNQILNPNFWKDYKKSKDSIRSLHEMKTSIKDFMKL 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +  I+   + E    ++ +E      +    +   +F++LLS + DS +A L++ 
Sbjct: 70  KNALEELEIIFSFSKE---ENLEKELEIQFHKTMKLLSNIEFKNLLSEKEDSLNAILQIS 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DW +ML+RMY  WAEK  F  + +    G+  GIKS TL I G  A+G+LK
Sbjct: 127 SGAGGTESCDWTSMLMRMYFMWAEKHNFSVKKINFISGDITGIKSVTLEIDGIYAFGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRL+RISP+DSNS+RHTSFSS++VYP+++D+I+I+I  SD + +T+R+SGAGGQ+
Sbjct: 187 GENGVHRLIRISPFDSNSKRHTSFSSVYVYPMINDNIDIDIKTSDIQWETFRSSGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ VR+ H PTG+ ++  + RSQ +N+ +A  +L+++L+E+E+ K+ E     +S 
Sbjct: 247 VNKVETGVRLRHHPTGITIENTESRSQMQNRQKALLLLKSRLFEIEMIKKNEKKEKIKSE 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K +I WG QIR+Y++ PY++VKDLRT  + T    V+DG++D F+K  L  KK
Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYQTTQIQSVMDGEIDTFLKKFLMYKK 359


>gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
 gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
          Length = 360

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 185/345 (53%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            +   +R   L     +P +     + + L +E   L+  IS  ++ +     L ++  L
Sbjct: 9   LETLAERQQELTALLAEPEIASAQKQFRELSQEYAQLEPVISCFRDFEQAQNVLDESKAL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGT 128
           L+    + D  +     + +   + ++E   ++  +LL  +   D  + +LE+ AG GG 
Sbjct: 69  LQ----DQDPELRVLAQEEIAATEKKLERLDRELHTLLLPTDPNDKRNIFLEIRAGTGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ LLRMY R+ E+R ++TE +    GE  G K   + I G  AY  LK E G H
Sbjct: 125 EAALFASDLLRMYLRYVEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + P  ++  EI+I+ +D R+DT+RASGAGGQHVN TDS
Sbjct: 185 RVQRVPQTESQGRIHTSACTVAIMPEAEEIDEIDINPADLRVDTFRASGAGGQHVNKTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           A+RITH+P+G+VV+CQ ERSQHKN+A+A ++LR KL   E +K          S    G 
Sbjct: 245 AIRITHLPSGIVVECQDERSQHKNRARAMSLLRTKLKLEEEEKLVAEETATRRSLIGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R N+      ++L G+LD  +   +A
Sbjct: 305 RSERIRTYNF-PQGRVTDHRINLTLYKLDEILQGNLDAIIDLLVA 348


>gi|223039191|ref|ZP_03609481.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
 gi|222879552|gb|EEF14643.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
          Length = 355

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 122/341 (35%), Positives = 180/341 (52%), Gaps = 15/341 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   L+    DP +  ++     L +E+ +L++  S  K     L D      L    
Sbjct: 10  LDRYDELSRLLSDPSITSDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALL--- 66

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           DD  + +   D L+ ++ + E  + E     L     D  + +LE+ AG GG E+  +A 
Sbjct: 67  DDAELGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L   Y R+AE R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+  
Sbjct: 127 DLFNAYARYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPE 186

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ + P V+DS EIEI+ +D RID  R+SG GGQ VNTTDSAVRITHI
Sbjct: 187 TESQGRVHTSAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHI 245

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QI 312
           PTG+VV  Q  +SQHKNK  A  +L+A+LYE++  + E +A      K+++G G    +I
Sbjct: 246 PTGIVVTNQDGKSQHKNKEAAMKVLKARLYEIQ--EEERVAKETSERKSQVGTGDRSGRI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           R+Y   P   + D R N+       ++   L D+ ++  +A
Sbjct: 304 RTYNF-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIA 343


>gi|254497857|ref|ZP_05110623.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
 gi|254352935|gb|EET11704.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
          Length = 351

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 118/337 (35%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++R   +     +  +  +  + K L +E   L+   +  +   D   +   L E+ L 
Sbjct: 1   MLERFQEVGRLLSEASVIADQNQFKALSKEYAQLEPVATCYETYLDAQNNLASLQEM-LA 59

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            DD  +     D L+  + ++    E  Q+  +     D  + YLEV AG GG E+  +A
Sbjct: 60  GDDQELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEAAIFA 119

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK E G HR+ R+ 
Sbjct: 120 GDLYRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQLKFESGAHRVQRVP 179

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V++  +I+I+  D RIDTYR+SGAGGQHVN TDSA+RITH
Sbjct: 180 DTESQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGGQHVNKTDSAIRITH 239

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313
           IPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E  K+ +E A   +S         +IR
Sbjct: 240 IPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQAQTRKSLVGSGDRSERIR 299

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+      DV++G+L   ++  
Sbjct: 300 TYNY-PQGRLTDHRINLTIYQLGDVMEGNLALVVEPL 335


>gi|212550858|ref|YP_002309175.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549096|dbj|BAG83764.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 359

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72
            D  + R   +     +P    ++     L +E + L+         K+    + D   +
Sbjct: 8   LDILIIRFEEIGKLISNPDSITDMKRFVKLNKEYRELEKISLIRDQYKQTLINIIDAQTI 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQ 131
           LE   ++    I +E  +    +  ++E K    L+     D  +A +E+ +G GG E+ 
Sbjct: 68  LEKESDKILREIAKEELEESTSLLNQLEKKIKLLLIPIDPQDGKNAIVEIRSGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY+++ E + +K       +G   G K     + G N Y  LK E GVHR+ 
Sbjct: 128 LFAGDLYKMYSKYCESKGWKIAVTSSSEGTIGGFKEIIFTVNGENVYSTLKYESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V+P   D ++IEI ESD R DT+ +SG GGQ VNTT SA+R
Sbjct: 188 RVPITETQGRIHTSAATVAVFPEAKD-VDIEIKESDIRTDTFCSSGPGGQSVNTTYSAIR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VVQCQ ERSQ KNK +A   LR+++Y +E QK+ +E A   ++  +      
Sbjct: 247 LTHIPTGIVVQCQDERSQLKNKEKAMTELRSRIYNIEYQKQIDETALKRKTMVSTGDRSA 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N    +    L+G++ +F+   +  +
Sbjct: 307 KIRTYNY-PQGRVTDHRINYTTYNLLTFLEGNIQEFINQLIIAE 349


>gi|257453431|ref|ZP_05618726.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
 gi|257449183|gb|EEV24131.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
          Length = 364

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 107/335 (31%), Positives = 166/335 (49%), Gaps = 7/335 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            F  D    R   +     +P    +  + + L  E   L   +    + +    D    
Sbjct: 6   RFRLDQMSDRFEEVTAMLSEPETMNDNKKFRELSVEHSDLSALVDVWGKYRQAEEDLATA 65

Query: 73  LELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            E+  +   D  + +   + +Q  K  +   +       L     D   A+LE+ AG GG
Sbjct: 66  EEMLSDATGDGDMKEMAQEEIQAAKDTINELEDVLNVMMLPKDPNDKVPAFLEIRAGTGG 125

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  ++  L RMY R+A  + ++ E L  ++GE  G K     + G   YG LK E G 
Sbjct: 126 DEAAIFSGDLFRMYERYAATQGWQVEVLSENEGEHGGYKEIISRVSGTGVYGRLKFESGA 185

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P V+    ++I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 186 HRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVDINPADLRIDTYRASGAGGQHINKTD 245

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVRITHIPTG VV+CQQERSQH N+ +A  ML +K+ + ++QK+ +  +++  +     
Sbjct: 246 SAVRITHIPTGTVVECQQERSQHANRDKAMKMLVSKIQQEKVQKQIDASSDMRRNLVGSG 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               +IR+Y   P   + D R N+       ++ G
Sbjct: 306 DRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMQG 339


>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
 gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 359

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 169/343 (49%), Gaps = 7/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R   L+    DP +  +    + L +E   +   +   +E +  +       EL  
Sbjct: 9   AVADRYEELSELLADPEVLGDSQRYQELSKEEGEIRETVEKYREYRKTVDAIAENEELQR 68

Query: 78  EEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D  +       L  ++       E  +   L +   D  +  +E+H  AGG E+  +
Sbjct: 69  EKLDPEMDSLVKAELAELRETKATLEEEIKILMLPTDPNDDKNIIMEIHGAAGGDEASLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L  MYTR+AE + +K E ++ +  +  G K   L+I G   Y  LK E G HR+ R+
Sbjct: 129 AADLYNMYTRYAETQGWKVEVVDENATDVGGFKEIVLMISGNKVYSKLKYENGAHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS S++ V P   + ++IEI + D R D YR+SGAGGQH+N T SAVR+T
Sbjct: 189 PVTESAGRVHTSTSTVGVMPEA-EDVDIEIDQKDIRTDVYRSSGAGGQHINKTSSAVRMT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTG+VV  Q ERSQ +N+ +A  +L+A++Y+    + E+  N    S    G    +I
Sbjct: 248 HLPTGIVVAMQDERSQQQNREKAMRILKARVYDYYQTQEEDAYNAERKSAVGTGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R  +       V++G+LDD + A +   +
Sbjct: 308 RTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDDIIDALILDDQ 349


>gi|313888275|ref|ZP_07821946.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845678|gb|EFR33068.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 355

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 176/343 (51%), Gaps = 11/343 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             +L  L        +  +    +    E   ++  ++  +  ++ L       EL  E+
Sbjct: 9   EDKLIELEKDLSSVEVINDSKLYQQKAIEHAEIEPIVTKYRAYKETLNSLNENKELIKEK 68

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
            D        + +     +VE  +   + LL    + DS +  +E+ AGAGG E+  +A 
Sbjct: 69  LDDDFKDLVREEINEATKKVEELENELKILLIPKDKNDSKNVMVEIRAGAGGDEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           +L R Y R+AE+  F+ E +  ++    G K    +I G  AY  LK E GVHR+ R+  
Sbjct: 129 VLYRQYVRYAERSGFRVETISSNEIGIGGYKEIVFMIIGNGAYSRLKYESGVHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   + ++IEI  +  + D +RASG GGQ VNTTDSAVR+THI
Sbjct: 189 TESGGRIHTSTATVAVLPEA-EDVDIEIDPTQIKFDVFRASGNGGQCVNTTDSAVRLTHI 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V+ CQ E+SQ +NK +A  +LR+KLY+L+L  +E+         ++IG G    +I
Sbjct: 248 PTGIVISCQDEKSQLRNKEKAMKLLRSKLYDLKL--QEQSEKESMERSSQIGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N+       + DGDLD+ + A +   +
Sbjct: 306 RTYNY-PQGRVTDHRINLTSHRIDAINDGDLDEIIDALITYDQ 347


>gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 356

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 184/349 (52%), Gaps = 9/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   ++   L  K  DP L ++ +  +   +E   L   +   +E          
Sbjct: 1   MFDKLDEVRKKYYELTDKLVDPELMKDNMAFQKTAKEHAELKPVVERYEEYLAEKEAVDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLL-SGEADSNDAYLEVHAGAGG 127
              +    DD  +++     L+  K    E+E +  +SLL     D  + +LE+ AG GG
Sbjct: 61  AHSIIKTSDDKDLVELAEMELEEKKGVLDELEDELKKSLLTKDPYDDKNIFLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LL+MYT++AE   +K E ++ ++    G K    L+KG  AY  LK E G 
Sbjct: 121 DEASLFAGDLLKMYTKYAEMNGWKVEVVDFNETGVGGYKEVVALVKGHGAYSKLKFEAGG 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I + D RID +RASGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSACTVAVLPEA-EDVDVHIEQKDLRIDVFRASGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+THIPTGVVV CQ ERSQ KN+ +A  +L++K+ E E+QK++   A   +      
Sbjct: 240 SAVRMTHIPTGVVVSCQDERSQIKNREKAMKLLKSKILEAEIQKKQSAEAASRKLQVGSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R   E  +    L G+++D + AT+A  +
Sbjct: 300 DRSERIRTYNF-PQNRVTDHRIK-ESANLDRFLLGEMEDMIDATIAFDQ 346


>gi|260438934|ref|ZP_05792750.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
 gi|292808585|gb|EFF67790.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
          Length = 358

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 183/345 (53%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +  + +   +N +   P +  +    + LM+E+  L   +      +     + D+L +
Sbjct: 5   LEEILIKYEDINMELASPDVTSDQRRFRNLMKEQSDLTPLVEAYTAYKKANQDIKDSLEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE   +E+   +L+E   + +    E+E K +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LEEENDEEMREMLKEELSSAKDKVAELEEKIKILLLPKDPNDDKNVIVEIRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE R++K E +   +    G+K    ++ G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYTHYAEARRWKVEVVNSDETGIGGMKEVEFMVTGQGAYSVLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +S+ V P   + +E++I E D RID  RASG GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTASVAVMPEA-EEVEVQIDEKDIRIDVMRASGNGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           +TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK  +  A+   S         
Sbjct: 244 LTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKAHDAEADARRSQIGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L+GD+ + + A +A  +
Sbjct: 304 KIRTYNF-PQGRVTDHRIGLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|229496751|ref|ZP_04390462.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
 gi|229316297|gb|EEN82219.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
          Length = 362

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 170/343 (49%), Gaps = 7/343 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L    N   R   +     DP +  +      L +E + L+      +E      +    
Sbjct: 7   LLHLQNLEARFEEVALLITDPSVIADDKRFVRLSKEYRRLEELHQAHEEYNRLKLNRQEA 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
           +EL    DD  +     + +     +    Q       L     D  +A +E+ AG GG 
Sbjct: 67  MELLNGTDDEEMKALAKEEIAFADEQCPQLQEKIALLLLPDDPEDGKNAIMEIRAGTGGD 126

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L +MYTR+ E   ++ E     +G   G K     + G NAYG LK E GVH
Sbjct: 127 EAALFARDLFKMYTRFVEGLGWRVEVSSYTEGTLGGYKEIVFSVTGDNAYGTLKYESGVH 186

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V+P   D  ++EI ESD RIDT+ +SGAGGQ VNTT S
Sbjct: 187 RVQRVPETEAQGRIHTSAATVAVFPEA-DEFDVEIKESDLRIDTFCSSGAGGQSVNTTYS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307
           AVRI H+PTG+ VQ Q ERSQ KNKA+A   LR+++Y LE QK  +E+A+  ++  +   
Sbjct: 246 AVRIVHVPTGITVQSQDERSQLKNKAKALTELRSRIYNLEHQKYLDEVASRRKTMVSTGD 305

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D R  +   +   VLDGDL   + A 
Sbjct: 306 RSAKIRTYNY-PQGRLTDHRIGLTLYNLQAVLDGDLKPIIDAL 347


>gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [Mycobacterium sp. MCS]
 gi|119869991|ref|YP_939943.1| peptide chain release factor 1 [Mycobacterium sp. KMS]
 gi|126436449|ref|YP_001072140.1| peptide chain release factor 1 [Mycobacterium sp. JLS]
 gi|119361564|sp|Q1B542|RF1_MYCSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223572|sp|A3Q3C2|RF1_MYCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223573|sp|A1UJZ5|RF1_MYCSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108771270|gb|ABG09992.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           MCS]
 gi|119696080|gb|ABL93153.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           KMS]
 gi|126236249|gb|ABN99649.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           JLS]
          Length = 357

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 176/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  +  +A+   R    L   ++  ++++    D     EL
Sbjct: 8   IDALLAEHADLERQLADPALHADAGKARKAGRRFAQLAPIVATYRKLEAARGDLEAAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
               DD S   E    L+    ++E +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  GA--DDASFAAEV-PELEATVDQLETQLSDLLAPRDPHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L+    +  G K ATL I          +  LK E GVHR
Sbjct: 125 ADLARMYIRYAERHGWSVTILDETTSDLGGYKDATLSIRSKGDSADGVWSRLKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  +++I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L E Q   + +    S    +  
Sbjct: 245 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQSLAEEQASADASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N +  +   VLDGDLD    A  A  K
Sbjct: 305 SERIRTYNF-PENRIADHRINFKAHNLDQVLDGDLDPLFDALAAADK 350


>gi|57238625|ref|YP_179756.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|73621534|sp|Q5HSH9|RF1_CAMJR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57167429|gb|AAW36208.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|315059063|gb|ADT73392.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 355

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AGAGG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|315125019|ref|YP_004067023.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018741|gb|ADT66834.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 355

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 182/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|308810022|ref|XP_003082320.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116060788|emb|CAL57266.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1699

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +  + LN +  DP +  +  E + L +    L+  +      +  + +      +
Sbjct: 59  LEATAKTHAELNERMADPEVTSDPKEFQRLSKACGELNYVVDLYARYRACVDEIEEARAM 118

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  ++    + +  +  E    VE      L     D  +  LE+ AG GG E+
Sbjct: 119 VKDAAGDEEMVAMAREEIDALTEESDKLVEDMTLALLPKDPLDEKNIMLEIRAGTGGDEA 178

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+AE+  ++   +  +  +  G K     IKG + Y  LK E GVHR+
Sbjct: 179 GIWAGDLYRMYMRFAEREGWQATVVTSNTADAGGFKEIVAEIKGADVYSNLKWEAGVHRV 238

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R  TS +++ + P V D +E++I E D  I T R+ GAGGQ+VN  ++A+
Sbjct: 239 QRVPATETQGRIQTSTATVAIMPEV-DEVEVQIDEKDLDISTARSGGAGGQNVNKVETAI 297

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ER+Q KN+ +A  +LRAKL+E++L   E+   I +  K+++G G 
Sbjct: 298 DLMHKPTGIRVFCTEERTQLKNRIRAMQILRAKLFEIQL--EEQQKAISDKRKSQVGSGS 355

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R           LDGD+   + A  A+++
Sbjct: 356 RSEKIRTYNWKDS-RVSDHRIG-TNFPLQTFLDGDIKGAIGAMQALEQ 401


>gi|157165147|ref|YP_001465968.1| peptide chain release factor 1 [Campylobacter concisus 13826]
 gi|166223539|sp|A7ZB10|RF1_CAMC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112801757|gb|EAT99101.1| peptide chain release factor 1 [Campylobacter concisus 13826]
          Length = 355

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 181/341 (53%), Gaps = 15/341 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   ++T   DP++  ++ +   L +E+  ++   +   +    L D      L    
Sbjct: 10  LDRYDEISTLLSDPNIANDIEKMTKLSKEQSSIEPVATAATKYLQILNDIEENKALL--- 66

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +D  + +   + L+ +++  E  + E     L     D  + +LE+ AG GG E+  +A 
Sbjct: 67  EDAELGELAKEELKSLEISREKLEEEIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L   Y R+AE R +K E +   +G   G K   +LIKG  AY  LK E G HR+ R+  
Sbjct: 127 DLFNAYIRYAELRGYKFEIVSQSEGNTGGFKEIIVLIKGKGAYSRLKFEGGTHRVQRVPE 186

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ + P V+DS EIEI+ +D R+D  R+SG GGQ VNTTDSAVRITHI
Sbjct: 187 TESQGRVHTSAVTVAIMPEVEDS-EIEINPNDIRVDVMRSSGHGGQSVNTTDSAVRITHI 245

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QI 312
           PTG+VV  Q  +SQHKNK  A  +L+A+LYE++  ++E +A      K+++G G    +I
Sbjct: 246 PTGLVVTNQDGKSQHKNKEAAMKVLKARLYEMQ--EQERLAKETSERKSQVGTGDRSGRI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           R+Y   P   + D R N+       ++   L D+ ++  + 
Sbjct: 304 RTYNY-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIT 343


>gi|90961566|ref|YP_535482.1| peptide chain release factor 1 [Lactobacillus salivarius UCC118]
 gi|119361553|sp|Q1WUD6|RF1_LACS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90820760|gb|ABD99399.1| Bacterial Peptide Chain Release Factor 1 [Lactobacillus salivarius
           UCC118]
          Length = 360

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 190/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDR 65
           +  LFD    ++ R   L     DP +  +      L +E   L   +      KE+  +
Sbjct: 1   MDKLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           + D+  +L   L+++  S+++E   N +  K+++E + +   L     D  +  +E+   
Sbjct: 61  ISDDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E
Sbjct: 121 AGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N
Sbjct: 181 SGAHRVQRIPVTESAGRVHTSTATVVVMPE-EEDVEIELDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+     ++E +    + K+
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDY--YAQQEQSEYDANRKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 298 AVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350


>gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
 gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
          Length = 359

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+ + +    L   +S   ++     D     EL
Sbjct: 10  IDDILAEHAGLEAQMSDPALHNDPAAARRVGKRFSELSPIMSTYNKLTAAQDDLEAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E  D L+    ++E    + L      D +D  LEV +G GG ES  +A
Sbjct: 70  AA--DDSSFAAEIPD-LEAEVAQLEQTLTDQLAPRDPHDGDDIVLEVKSGEGGEESALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
           + L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR
Sbjct: 127 SDLARMYVRYAERHGWRVEILDATVSDLGGYKEATLSIKSKSDTPDGVWARLKFEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  +++I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  +  +  +  A+ G  S+   +  
Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQVVAEEAADAEASAGRQSQVRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDG+LD  + A     +
Sbjct: 307 SERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDALGKADR 352


>gi|291527966|emb|CBK93552.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale M104/1]
          Length = 358

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 183/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +     L     +P +  +    K LM+E+  L   +   K+ ++   +   
Sbjct: 1   MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L+  K +VE  + +           D  +  +E+ AGAGG
Sbjct: 61  SLAILDEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +K E L+  +    G+KS   ++KG  AY  LK E GV
Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS  S+ V P   + ++++I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEA-EDVDVKIDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEI 306
           SAVR+TH P+G+V+  Q E+SQ +NK +A+ +LR KLY++ELQK++   A    S     
Sbjct: 240 SAVRLTHYPSGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +L+GD+ + + A +A  +
Sbjct: 300 DRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|21230341|ref|NP_636258.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|188992877|ref|YP_001904887.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|24418637|sp|Q8PC68|RF1_XANCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576663|sp|B0RUA5|RF1_XANCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21111894|gb|AAM40182.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|167734637|emb|CAP52847.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris]
          Length = 361

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     ++E      D      +
Sbjct: 9   LEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + +   +  ++    Q   LL      D  + +LEV AG GG E+ 
Sbjct: 69  ---RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ 
Sbjct: 126 IFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+R
Sbjct: 186 RVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G  
Sbjct: 246 ITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDR 303

Query: 311 --QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 304 SQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLL 346


>gi|78187994|ref|YP_378332.1| peptide chain release factor 1 [Chlorobium chlorochromatii CaD3]
 gi|119361520|sp|Q3AUE2|RF1_CHLCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78170193|gb|ABB27289.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           chlorochromatii CaD3]
          Length = 357

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 175/350 (50%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      ++   L     DP L  +    + L RE  +L   +      Q +  +   
Sbjct: 1   MLDKLQAIKEKHLDLEQALSDPSLANDQERFRKLNREYSNLREVVQAFDAYQRKATELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              L   E D  +       +  ++  V   +       L   EADS +  +E+ AG GG
Sbjct: 61  AQHLLATESDTEMKALAEAEVDELQETVAELEQGLKILLLPKEEADSRNVIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE++ ++ + L+ ++     G K   L I G N +G +K E G
Sbjct: 121 DEASLFAADLTRMYQRYAEQKGWQYKVLDYNESSVPGGFKEMILEISGNNVFGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTEAQGRIHTSAVSVAVLPEA-EEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTE 305
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLR KLY+++L ++++  A++  +    
Sbjct: 240 ETAVRITHMPTGIVAACQEERSQLQNKERAMQMLRTKLYDIQLAEQQQQRADLRRTMVAT 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +IR+Y   P   V D R      +   ++ G+L + ++A +   +
Sbjct: 300 GDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGELHEVIEALIMHDQ 348


>gi|282861117|ref|ZP_06270182.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
 gi|282563775|gb|EFB69312.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
          Length = 358

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 175/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   IS  +  +    D     E 
Sbjct: 5   VEELIGEHADLEKKLSDPSVHADQANARKLNKRYAELTPVISTYRAWKRTGDDIETAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  +K E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARMKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPSTESQGRIHTSAAGVLVTPEA-EEVDVEIHANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKT 304
           TDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+  +++  S   
Sbjct: 242 TDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 347


>gi|313885157|ref|ZP_07818909.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619848|gb|EFR31285.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 359

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 175/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ + R   +N    DP +  +    + L  E   L   +  I+  ++   +      +
Sbjct: 5   LDSLLIRYDEVNELLSDPIVIADSNRLRELTIEEADLRPKVEKIRRYKEVEAEIEDTEAM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  IL    + L  +K E E  Q       L     D  +  +E+   AGG E+Q
Sbjct: 65  LSEESDDDILAMAKEELASLKAENEQLQEDIKLLMLPEDPNDGKNIIMEIRGAAGGDEAQ 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MYT++A+K+ +KTE L+ +     G K  TL+I G   Y  LK E G HR+ 
Sbjct: 125 LFAGDLLNMYTKYADKQGWKTEVLDANITGIGGYKEVTLMITGNKVYSKLKFENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + I+ E+ E+D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPQTESQGRVHTSTATVVVMPEA-EEIDFELDENDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPT  VV  Q ERSQ KN+ +A  +LRA++Y+    + +  +      K ++G G  
Sbjct: 244 LTHIPTNTVVAMQDERSQIKNREKAMKILRARVYD--QVRSQAQSEYDSERKLKVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL G+LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQSRVTDHRIGLTLQQLDSVLSGNLDEIIDALVLYDQ 347


>gi|229823150|ref|ZP_04449219.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
 gi|229787316|gb|EEP23430.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
          Length = 359

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 176/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            D  + R   L+    DP +  +    + L  E   L   +      K++Q  + D   +
Sbjct: 5   LDALIFRFEELHELLSDPEVISDSKRLRELTIEEADLSPKVAKIKRYKQVQQEIKDTEEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQ 131
           L   L+ D   + +     L+  K  +E +    +L     D  +  +E+   AGG E+Q
Sbjct: 65  LGEGLDADMAELAKMELAELKAEKPRLEEEIKVMMLPEDPNDGKNIIMEIRGAAGGDEAQ 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MYTR+A+ + +K E L+ +     G K  +L+I G   Y  LK E G HR+ 
Sbjct: 125 LFAGDLLNMYTRYADSQGWKVEVLDANITGIGGYKEVSLMITGHKVYSKLKFENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +++++ ++D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPETESQGRVHTSTATVVVMPEA-EEVDLDLKDADIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV  Q ERSQ KN+ +A  +LRA++Y+  + + E  A    + K  +G G  
Sbjct: 244 LTHLPTGVVVAMQDERSQLKNREKAMKVLRARVYD--MLQSEAQAEYDSNRKLAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       ++ G LD+ +   +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQQLDAIMSGKLDEIIDGLVLFDQ 347


>gi|315651889|ref|ZP_07904892.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
 gi|315485891|gb|EFU76270.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
          Length = 356

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 187/349 (53%), Gaps = 9/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++ V     +  +     +  +    + LM+E+  L   +      K+ +    D
Sbjct: 1   MFDNLEDIVVHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +LE+  +E+   + +E     +R++ E+ +  +   L     D  +  LE+ AGAGG
Sbjct: 61  ALEMLEM-NDEEMKEMAKEELAEGKRLEEELSDKLKILLLPKDPNDDKNIMLEIRAGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +AE + +K E +++++    G K    ++ G  AY  LK E GV
Sbjct: 120 DEAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGV 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +S+ V P   + ++++I  +D RID  RASG GGQ VNTTD
Sbjct: 180 HRVQRVPETESGGRIHTSTASVAVMPEA-EEVDVQIDMNDVRIDVMRASGNGGQCVNTTD 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYE+EL+K++        S+   G
Sbjct: 239 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFTLLRSKLYEIELEKKQSAEAADRRSQIGTG 298

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +++GD+ + +   +A  +
Sbjct: 299 DRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQ 346


>gi|310644400|ref|YP_003949159.1| peptide chain release factor 1 [Paenibacillus polymyxa SC2]
 gi|309249351|gb|ADO58918.1| Peptide chain release factor 1 [Paenibacillus polymyxa SC2]
          Length = 355

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E +  + +   
Sbjct: 1   MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKTVVEELDA 60

Query: 72  LLELALEEDDCSILQETSDNLQRI---KLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++ +   K E++ K +   L     D  +  +E+   AGG
Sbjct: 61  AKAMQAEKLDDEMREMVKMEIEELSARKRELDEKIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+A+ + ++ E ++ +  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVSVMPEA-EEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V  CQ  +SQ+ NK +A  +LRA++ +  + ++EE A      K+++G
Sbjct: 240 SAVRVTHMPTGIVATCQDGKSQNSNKEKALQVLRARISD--MMRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQ 347


>gi|138896954|ref|YP_001127407.1| peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249772|ref|ZP_03148468.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
 gi|166223561|sp|A4ITK8|RF1_GEOTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134268467|gb|ABO68662.1| Peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210648|gb|EDY05411.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
          Length = 358

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  +   QR   LN    DP +  +  + +   +E+  L   +   +E +    +L +
Sbjct: 1   MFDRLEAVEQRYEKLNELLMDPAVINDPKKLRDYSKEQADLTETVQTYREYKSVRSQLAE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGG 127
              +LE  LE +   +++E  D L+  +  +  K    L      D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLEPELREMVKEEIDELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K    ++ G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMVNGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P + + +E+EI E D R+DTY +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEM-EEVEVEIHEKDIRVDTYASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYD--KYQQEARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDLVLDGQLDEIIEALILDDQ 347


>gi|119505822|ref|ZP_01627888.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
 gi|119458320|gb|EAW39429.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
          Length = 362

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + V R   +     DP   ++    + L RE   LD  +      +    D     E+
Sbjct: 9   LASLVDRHEEVAALLGDPETAEDTNLFRELSREYSQLDEVVVAFTAYRTATADVEAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +  +D L     +  ++E   Q   L   + DSN+ YLE+ AG GG E+ 
Sbjct: 69  LSDS-DPELREMAADELAVSTELVAKIESDLQVLLLPRDKRDSNNVYLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE + ++ E +    G+  G K     + G + Y +LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAESKGWRLETISDRAGDHGGFKEIISRVVGNDVYAYLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V    DD   I+I + D R+DT+R+SGAGGQHVNTTDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAVMAEPDDVEAIDIRKEDLRVDTFRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L      K   E A    +         
Sbjct: 248 ITHLPTGVVVECQDERSQHKNRARAMSLLSARLLTAAEDKAHSEQAAERRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+      +++ G LD  ++  
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYKLDEIVQGQLDALVQPL 346


>gi|320449740|ref|YP_004201836.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
 gi|320149909|gb|ADW21287.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
          Length = 307

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 139/299 (46%), Positives = 188/299 (62%), Gaps = 5/299 (1%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   + ++  L   L L +    E+  ++  E  +  +++    E    E+LLS      
Sbjct: 1   MDTFRSLESDLEGLLELWQEFPAEEREALRPELLEAAKKL----ESLYHETLLSFPHAEK 56

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A L +  GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A ++++G 
Sbjct: 57  NAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDVTPGAEAGIDYAQIIVRGE 116

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NAYG L  E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+ I   D RID +R+
Sbjct: 117 NAYGLLAPEAGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRS 176

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ VNTTDSAVRI H+PTG+ V CQ  RSQ KNK  A  +LR++LYELE +K++E 
Sbjct: 177 QGHGGQGVNTTDSAVRIVHLPTGITVTCQTTRSQIKNKELAMKVLRSRLYELEWKKKQEE 236

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                     I WG QIRSYVL   Q VKD RT + +  P +VLDGDL DF+ A L  K
Sbjct: 237 LRKLRGEVRPIEWGSQIRSYVL-DKQYVKDHRTGLMRFDPQNVLDGDLLDFIWAGLEWK 294


>gi|302392966|ref|YP_003828786.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
 gi|302205043|gb|ADL13721.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
          Length = 359

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A  R   L     DP +  N  + + L +E   L   +   ++ ++ + +     EL
Sbjct: 8   LDDAEARYEKLQKMLSDPEVINNQSKFQKLSKEHAELKKLVKKYRKYKEIMAEIEEAKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              EDD   ++     L  ++ + E  +       +     D  +  +E+ AG GG E+ 
Sbjct: 68  LEMEDDEEAVELAKMELAELEPKQEKLEEELPLMLIPEDPNDEKNVIVEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ +  + +     E  G K    +++G  AY  LK E GVHR+ 
Sbjct: 128 LFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGGFKEMIFVVEGKGAYSRLKYESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + ++IEI+++D  I+TYR+SG GGQ VNTTDSAVR
Sbjct: 188 RVPETESSGRIHTSTATVAVLPEA-EDVDIEINQNDLTIETYRSSGPGGQSVNTTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH PTGVVV CQ E+SQHKNK +A  +LR+++   E  + E+ A   E  K +IG G  
Sbjct: 247 ITHEPTGVVVSCQDEKSQHKNKRKAMRVLRSRI--QEKIEAEKQAEEAEKRKMQIGSGGR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       +LDG++D+ +   +   +
Sbjct: 305 SERIRTYNF-PQGRITDHRINLTTHQMESILDGEIDELVDELVTADQ 350


>gi|293375558|ref|ZP_06621832.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325836776|ref|ZP_08166243.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
 gi|292645775|gb|EFF63811.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325491154|gb|EGC93443.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
          Length = 354

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 182/344 (52%), Gaps = 6/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +N    DP +  ++ +   L +E++ L+  ++   E ++       L E+
Sbjct: 5   LEAILERYEKINEMMADPAIVTDIKKLTELSKEQRGLEETVNVYTEYKNIASSIEDLKEM 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
           A + D + S + E      + +L    +Q E LL      D  +  +E+   AGG E+  
Sbjct: 65  AKDSDPEISEMAEMELEELKPRLPELEQQLEILLIPKDPNDEKNVIVEIRGAAGGDEANI 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMYT++AE + +K + + +   E  G+     +I G + +  +K E G HR+ R
Sbjct: 125 FASDLYRMYTKYAELKGWKIQVMNVDYSESGGMSQVEFMISGESVFSHMKYESGAHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++IE+S +D R+DT+ +SG GGQ VNTT SAVR+
Sbjct: 185 VPATESQGRIHTSTATVLVMPEA-EDVDIEVSMNDIRVDTFCSSGPGGQSVNTTKSAVRL 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
           TH+PTG+VV CQ  +SQH+NKA A  +L+A++Y+  LQ+R E       S         +
Sbjct: 244 THVPTGIVVSCQDGKSQHENKANALKVLKARIYDSILQERLEAEGEERRSKIGTGERSEK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R          V++G L+  ++A +  ++
Sbjct: 304 IRTYNY-PQNRVTDHRIGFTIQQLDRVMEGKLEPVIEALITEEQ 346


>gi|300361412|ref|ZP_07057589.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
 gi|300354031|gb|EFJ69902.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
          Length = 362

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 168/341 (49%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   +   +   ++ +  + +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISSESDDDLVEMAKEENFELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RVPVTESQGRVHTSTATVAVMPE-YEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q R++     + +        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDKYDAKRKDAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       V++G+LD+ + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINALV 346


>gi|91217382|ref|ZP_01254342.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
 gi|91184490|gb|EAS70873.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
          Length = 358

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 176/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  N   QR   ++     P +  N      L +E + L   +   +   +   +   
Sbjct: 1   MLDKLNFIKQRFDEVSDLIIQPDIMSNQKRYIELSKEYKDLKAIMDEREIYIELTDNLKE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D  +++         K+E+    E  +   +     D+ +A +EV AGAGG
Sbjct: 61  ANDIISNESDAEMVEMAKLQYDEAKVELPNLEEKIRMMLIPKDPEDAKNAVVEVRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RM +++ E + +K + ++ ++G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDIFRMLSKYCEHKGWKVDVVDYNEGTNGGYKEIQFEVSGDDVYGTLKYEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V+P   +  +IE++  + R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVFPEA-EEFDIEVNPKEVRVDYFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K++        S    G
Sbjct: 240 SAVRLTHEPTGIVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKQAEDAEKRGSMVTSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y       V D R N+      ++++GDL+  +   
Sbjct: 300 DRSAKIRTYNYS-QSRVTDHRINLTLYDLDNIINGDLEKIINEL 342


>gi|168702592|ref|ZP_02734869.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 342

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 5/333 (1%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L  K  +   W N  +AK ++ + +  +  +   +E+     D   + ELA  E+D +
Sbjct: 3   DQLEAKQAEGDFWNNPEKAKSVIGQLKVCNALLKPYEELTAAANDIKAMAELA--EEDAA 60

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    LQ+ + + E  + + ++ G+ DS  A + +  GAGGT++ D+A ML R Y R
Sbjct: 61  FESELEPALQKAETQYEAFELQIMMGGKHDSRSAIVTIKPGAGGTDACDFAEMLFRAYGR 120

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WA++  F  E  +I   +EAG+ S +  I GP AYG+++ E GVHRLVRISP+     R 
Sbjct: 121 WAQRHGFSVEDEDIEPNQEAGVASVSFKIVGPYAYGYMQSEIGVHRLVRISPFGGGDTRQ 180

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++I V P + D IEI I ++D  + T+   G GGQHVN T S VR+ H  +G+  +C
Sbjct: 181 TSFAAIDVLPELPDDIEIVIKDTDYEVQTFSTGGPGGQHVNKTQSGVRLIHK-SGIRAEC 239

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           +  RSQHKNKA+A  ML+ +L  +E QKR   A     +K EI +G QIRSYVLQPY +V
Sbjct: 240 RMGRSQHKNKAEALKMLQTRLEAVEEQKRMGDAVKSYDAKGEIAFGSQIRSYVLQPYTLV 299

Query: 324 KDLR--TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +D R   +++  + +DVLDG+ D FM A L  K
Sbjct: 300 RDERDGIDVKTPAVNDVLDGNFDQFMHAYLRHK 332


>gi|297559304|ref|YP_003678278.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843752|gb|ADH65772.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 356

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              D+ +     L  +  DP +  +   A+ L +    L   I   + +++   D     
Sbjct: 1   MKLDDLLGEYYELEQQLADPEVHADQARARTLGKRYAQLTPIIETYRALKEVESDIDTAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA E  D S  +E     +  +   E  +   +    AD  +  +EV AG GG ES  +
Sbjct: 61  ELAAE--DSSFAEEADRLTEEAERLTERLRVLLIPRDPADDKNLIMEVKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQG 186
           A  L+RMY R+AE++ +KTE ++    +  G K  T+  K       G   +  LK E G
Sbjct: 119 AGDLVRMYLRYAERQGWKTEVIDSTHSDLGGYKDITIAFKNKGTPEPGSGVWPMLKFEGG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V P   + IE+EI E D R+D YR+SG GGQ VNTT
Sbjct: 179 VHRVQRVPVTESQGRIHTSAAGVLVVPEA-EDIEVEIHEKDLRVDVYRSSGPGGQSVNTT 237

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305
           DSAVRITH+PTG+V  CQ E+SQ +NK QA  +LRA++Y       +  A     S+   
Sbjct: 238 DSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRARIYAEAQASADAEAAAERKSQVRT 297

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +    ++R+Y   P   + D R   +  +   VLDG+L   +KA +
Sbjct: 298 VDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGELGGVVKALV 342


>gi|239995055|ref|ZP_04715579.1| Protein chain release factor B, RF-2 [Alteromonas macleodii ATCC
           27126]
          Length = 248

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 158/246 (64%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  D ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ +GE AGIK
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL ++G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+IEI+ S
Sbjct: 61  SATLRVQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIEINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|332637164|ref|ZP_08416027.1| peptide chain release factor 1 [Weissella cibaria KACC 11862]
          Length = 361

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 172/344 (50%), Gaps = 8/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V R   ++    DP +  +      L +E   L   +   K  +D +       E+  
Sbjct: 10  AVVDRYDEISEMISDPDVISDTQRFMALSKEEGSLRETVETFKRYKDVVDGIEGNEEMLN 69

Query: 78  EE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           E   D  + +   D L+ +K E E  +       L     D  +  +E+H  AGG E   
Sbjct: 70  EGLGDAELEEMAKDELKELKAEKETLEEQIKILLLPKDPNDDKNIIMEIHGAAGGDEGAL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L  MY R+AEK+ +  E ++ +  E  G K   L+I G N Y  LK E G HR+ R
Sbjct: 130 FAADLYDMYQRYAEKQGWNVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENGAHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++IEI + D R+D YR+SGAGGQHVN T SAVR+
Sbjct: 190 VPETESAGRVHTSTATVGVMPE-YEDVDIEIEDKDLRVDVYRSSGAGGQHVNKTSSAVRM 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQ 311
           TH+P+G+VV  Q +RSQ +N+A+A  +L+A++Y+    + E   A   +++        +
Sbjct: 249 THLPSGIVVAMQDQRSQQQNRAKALEILKARVYDYYASQNEAEYAEQRKTAVGTGDRSER 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       +++G+L+D + A +   +
Sbjct: 309 IRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALIIADQ 351


>gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
 gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
          Length = 362

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 179/342 (52%), Gaps = 7/342 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
                 ++R   +     +  +  +  + K L +E   L+   +  +   +   DN+  L
Sbjct: 7   LKLQQMLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEA-KDNVSSL 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           E  L  +D  +     + L   K +VE      Q+  +     D  + YLE+ AG GG E
Sbjct: 66  EELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE++ ++ E +    GE  G K     I G   Y  LK E G HR
Sbjct: 126 AAIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA
Sbjct: 186 VQRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGW 308
           +RITHIPTGVVV+CQ ERSQHKN+++A ++L+ +L + E  K R+E A   +S       
Sbjct: 246 IRITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKSLVGTGDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R N+     +DV++G L   ++  
Sbjct: 306 SERIRTYNY-PQGRLTDHRINLTIYQLNDVMEGKLSLVVEPL 346


>gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122252101|sp|Q01RX8|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 362

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 180/342 (52%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L  +  DP +  +  + + + + +  L +  +  +E + ++ D L     
Sbjct: 7   LDQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWK-KVEDGLAQARP 65

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L+E D  + +     + +++ E     E  +   L     D  +  LE+ AG GG E+ 
Sbjct: 66  MLQEQDAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEAT 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE + +K E     +    G+K    L+ G   Y  LK E GVHR+ 
Sbjct: 126 LFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +   R HTS  ++ V P   D +E+++   D RIDT+ +SG GGQ VNTT SAVR
Sbjct: 186 RVPVTEQQGRVHTSAITVAVLPEA-DEVEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KN+A+A  +LR++LYELEL+K++  A +G   +T +G G  
Sbjct: 245 ITHLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQ--AALGAERRTMVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       V++G +D  + A 
Sbjct: 303 SEKIRTYNF-PQNRVSDHRIGLTLHQLDFVMEGKMDAIVDAL 343


>gi|81428746|ref|YP_395746.1| peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
 gi|119361554|sp|Q38WJ4|RF1_LACSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78610388|emb|CAI55438.1| Peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 365

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L     DP +         L +E   L   +     +++ L +     EL
Sbjct: 8   LDGLLDRYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRLKEVLSEVTENEEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +    +L+ ++ E    + E     L +   D  +  +E+   AGG E+ 
Sbjct: 68  LRETTDSEMTELVKADLEELQTEKAQLEQEIKILMLPTDPNDEKNIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY R+AE + ++TE ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 128 LFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKNVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   D +++E+   D R+D YRASGAGGQH+N T SAVR
Sbjct: 188 RIPKTESQGRVHTSTATVAVMPE-YDGVDVELEAKDIRVDVYRASGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q +RSQ +N+ +A  +L+A++Y+  E Q + E  +  +S+        
Sbjct: 247 MTHIPTGIVVAMQDQRSQQQNRVKAMKILQARVYDYYESQNQSEYDSSRKSAVGSGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +++G+L D + A +   +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGDVIDALILFDQ 350


>gi|326335638|ref|ZP_08201825.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692404|gb|EGD34356.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 296

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 136/288 (47%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L +  ++L+   E  +    +E      +    +E  +F ++LS E D+  A L++ AGA
Sbjct: 2   LEELQVMLDFYKE--NAISAEEVEAFYAKTLTHIENLEFRNMLSDEGDALSAVLQITAGA 59

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTES DWA+ML+RMY  WA ++ F  + L   +G+ AG+K+ TL I G  A+G+LKGE 
Sbjct: 60  GGTESCDWASMLMRMYIMWANRQGFSVKELNYQEGDVAGVKTVTLEIDGEFAFGYLKGEN 119

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ +D   +T R+SGAGGQ+VN 
Sbjct: 120 GVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFETMRSSGAGGQNVNK 179

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LYE+EL+KR+   +  E++K +
Sbjct: 180 VETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEMELKKRQAKRDEIEANKMK 239

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           I WG QIR+YV+QPY++VKD+RTN E T+   V++G++DDF+KA L +
Sbjct: 240 IEWGSQIRNYVMQPYKLVKDVRTNYETTNVDAVMNGEIDDFLKAYLML 287


>gi|320008549|gb|ADW03399.1| peptide chain release factor 1 [Streptomyces flavogriseus ATCC
           33331]
          Length = 358

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 174/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   +S  +  +    D     E 
Sbjct: 5   VEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRSWKQTGDDIGTAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E     ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKVLEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  +K E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARMKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPSTESQGRIHTSAAGVLVTPEA-EEVDVEIHANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKT 304
           TDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+  +++  S   
Sbjct: 242 TDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQACV 347


>gi|312142772|ref|YP_003994218.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
 gi|311903423|gb|ADQ13864.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
          Length = 357

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 185/350 (52%), Gaps = 15/350 (4%)

Query: 13  LFDWDNA----VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +FD D      V +   LN K  DP +  +  + + L+++   L   +   KE ++    
Sbjct: 1   MFDLDEKLDKLVDKYQDLNKKLSDPEVINDSSKYQKLLKKHAKLKKIVDKYKEYKEAKQG 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124
                E+   EDD  + +     ++ ++   E  + E     L     D  +  +E+ +G
Sbjct: 61  IEDAEEMIEMEDDPEMQELAELEIEELQPTKEKLEEELPIMLLPDDPNDEKNVIVEIRSG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R++E + +K E +  +     G K     ++G   Y +LK E
Sbjct: 121 AGGDEAALFAADLFRMYSRYSENQGWKVEVMNANLSGVGGYKEIIFTVEGSEVYKYLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S+ R HTS +++ V P   + ++I+I  +D RID YR+SG GGQ VN
Sbjct: 181 SGVHRVQRVPSTESSGRIHTSTATVAVLPEA-EEVDIDIDPNDLRIDVYRSSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH PT + V CQ E+SQHKNKA+A  +LRA++   E  + E+ A   E+ K+
Sbjct: 240 TTDSAVRITHEPTEITVSCQDEKSQHKNKAKAMRILRARV--QEKIESEKQAKRAEARKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++G G    +IR+Y   P   V D R N+       +LDGDL   + A +
Sbjct: 298 QVGTGDRSEKIRTYNF-PQGRVSDHRINLTVHQLDKILDGDLAPVIDALI 346


>gi|304407781|ref|ZP_07389432.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
 gi|304343264|gb|EFM09107.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
          Length = 358

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 184/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   L+    DP +  +    +   +E+  L  A     E +    +L D
Sbjct: 1   MLDRLSVLADRYEKLSELLCDPDVAGDPKRLREYSKEQSSLQEAYEAFTEYKQVCEQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++L   L+++   +++     L   K  + E  +   L     D  +  +E+   AGG
Sbjct: 61  AKLMLGEKLDDEMREMVKMEIGELDERKTALDERIRILLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY ++A+ + ++ E +++++ +  G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAYDLYRMYNKYADSQGWRVELMDMNESDLGGFKEVVFMIIGKGAYSKLKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P + + ++IEI + D RIDT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPATESGGRIHTSTSTVAVMPEI-EEVDIEIHDKDIRIDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ H+PTG++  CQ  +SQ++NKA+A  +LRA++Y  E+ ++EE A      K+++G
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIY--EIHRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+++ ++     ++
Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTLHRLDAIMNGDIEEIVQTLTITEQ 347


>gi|325479514|gb|EGC82610.1| peptide chain release factor 1 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 358

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 184/341 (53%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  K  DP +  ++ +   + RE   L   +    +I++         EL
Sbjct: 5   IEHIKENYKDLEKKMIDPEVLSDIAKLTKITREYNSLKPIVEKYDQIKEAEDTIEENKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E DD  +++   + ++  +  ++    + + LL      DS D  +E+  GAGG E+ 
Sbjct: 65  INEADDQDMVEMLKEEIKENEKLLDEYNEEMKILLIPKDPNDSRDVIIEIRPGAGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K  +KTE +E+      GIK AT +I+G  AY   K E GVHR+ 
Sbjct: 125 LFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKDATFMIRGEGAYSRFKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V D +++ +  +D R D +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLPEV-DELDVHVDPNDIRTDVFRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q E+SQ KNK +A  +L A++YELE +KR +EIA+  +S         
Sbjct: 244 LTHIPTGIVVSMQDEKSQIKNKEKAMRILLARIYELEEEKRNKEIADNRKSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R N       D L+G++ + + + +
Sbjct: 304 RIRTYNF-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLI 343


>gi|319776546|ref|YP_004139034.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
 gi|317451137|emb|CBY87370.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
          Length = 248

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 150/247 (60%), Positives = 193/247 (78%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+ + Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGEHDACNCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQVMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|154500225|ref|ZP_02038263.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
 gi|150270957|gb|EDM98231.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
          Length = 355

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 177/337 (52%), Gaps = 8/337 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              L  +   P  + +      L +E+  L+  +   +    R  D      L  + D  
Sbjct: 12  YEDLVARLNAPETYGDPALVAKLNKEQSELEPLVETYRRYIRRQQDMEEARSLMSDPDMK 71

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            + QE     +    E+E K    LL     D  +  +E+ AG GG E+  +AN L RMY
Sbjct: 72  ELAQEEFAQAKEEAEELEQKMKILLLPTDPNDGKNVIVEIRAGVGGEEAALFANSLYRMY 131

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           + +AE R +K E   +++ E  GIK  +  ++G  AY  LK E GVHR+ R+   +S  R
Sbjct: 132 SMYAETRHWKVEVASLNETELGGIKEISFTVEGGGAYSRLKFESGVHRVQRVPETESGDR 191

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS  ++ V P   + ++++I+ +D  +  +R+SGAGGQH+N T SAVR+ H PTG+VV
Sbjct: 192 IHTSTVTVAVLPEA-EEVDVDINPADIEMQVFRSSGAGGQHINKTSSAVRLIHKPTGMVV 250

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
           +CQQERSQ +N+ +A  +LR++LYE E  ++   A   E  ++++G G    +IR+Y   
Sbjct: 251 ECQQERSQFQNRDKAMQILRSRLYEAE--QQRVSAEWSEERRSQVGTGMRNERIRTYNF- 307

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   + D R  +      DV++GDLD+ + + +   +
Sbjct: 308 PQGRLTDHRIGLTLYKLEDVMNGDLDEIIDSLITADQ 344


>gi|42518855|ref|NP_964785.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227889713|ref|ZP_04007518.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|268319749|ref|YP_003293405.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|61214647|sp|Q74K25|RF1_LACJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41583141|gb|AAS08751.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227849577|gb|EEJ59663.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|262398124|emb|CAX67138.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|329667598|gb|AEB93546.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026]
          Length = 362

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 168/341 (49%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   +   +   ++ +  + +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISTESDNDLVEMAKEENSELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RVPVTESQGRVHTSTATVAVMPE-YEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q R++     + S        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDQYDAKRKESVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G+LD+ + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIINALV 346


>gi|319936941|ref|ZP_08011351.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
 gi|319807877|gb|EFW04456.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
          Length = 358

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 178/343 (51%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  ++ +     +E+  L+ A    +E +  L       EL
Sbjct: 8   LETIARRYEELNEILMDPSIASDIHKMTEASKEQASLETAYQLYQEYKKVLSGIEEAKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E +D  I +     L  ++ +     E    E +     D+ +  +EV   AGG E  
Sbjct: 68  MKE-NDPEIKEMAELELSELEEKKPHLEEKLHLELIPKDPNDNKNVIVEVRGAAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++AE + +K E +E  + E  G    + ++KG   Y  LK E G HR+ 
Sbjct: 127 IFAGDLYRMYVKYAESQGWKVEVMETQESEAGGFSLVSFMVKGEGVYSKLKFESGSHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI+  D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 187 RVPKTETQGRVHTSTATVLVMPEA-EEVDVEINPGDLRIDTYRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+V   Q  RSQH NK +A   LRA++Y  E+ +RE+   +G   +++IG G  
Sbjct: 246 ITHLPTGIVASSQDGRSQHDNKDKAMRALRARVY--EMVQREQEEALGSERRSKIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       +++G LDD + A +
Sbjct: 304 SEKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLDDVIDALI 345


>gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 360

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 125/350 (35%), Positives = 193/350 (55%), Gaps = 8/350 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RL 66
             + D   N  +++  L     DP + ++  + + + +E + L   +S   + +    ++
Sbjct: 3   KKILDQIKNIEEKVKKLEQLLTDPEVLKDPSKIQSIAKEHKDLSEILSLYNQYEKVNFQI 62

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGA 125
            +   L+    E+D   + +   + L++   E+E K +   L     D  +  LE+  G 
Sbjct: 63  EEVKQLINSTTEDDLRELAELELEELKQELSELEKKIELAFLPKDPNDEKNVILEIRQGT 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY R+AE+  +KTE L IH  +  G+K    LIKG  AY  LK E 
Sbjct: 123 GGEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGGVKEVIALIKGKGAYSRLKYES 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S+ R HTS +++ V P   + ++IEI   D +I+T RA GAGGQHVNT
Sbjct: 183 GVHRVQRVPETESSGRIHTSTATVAVLPEA-EEVDIEIKPEDLKIETMRAGGAGGQHVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKT 304
           TDSAVRITH+PTG+VVQCQ ERSQ +NK +A  +LRA+L +  +  +RE+IA   +    
Sbjct: 242 TDSAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLKDYYDRLEREKIAKERKEQVG 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 +IR+Y   P   V D R N      +D+LDGDLD+ ++  +A +
Sbjct: 302 TGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDILDGDLDEIIEVLIAKE 350


>gi|329943005|ref|ZP_08291779.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|332287587|ref|YP_004422488.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|313848161|emb|CBY17162.1| peptide chain release factor 1 [Chlamydophila psittaci RD1]
 gi|325506915|gb|ADZ18553.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|328814552|gb|EGF84542.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|328914838|gb|AEB55671.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
          Length = 361

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 177/339 (52%), Gaps = 7/339 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++RL  +  K  +P ++ N  E  +L +E   L    +    +  +        +   +E
Sbjct: 9   LKRLEEVEAKISNPEIFDNPKEYSLLSKEHARLSELKNTYDRVVAQEKILSDDKQALAQE 68

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
            D  ++    + +Q  K EV+   K  E+LL      D  +  +E+ AG GG E+  +  
Sbjct: 69  KDPEMIAMLEEGIQSGKAEVDKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
             +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+  
Sbjct: 129 DCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
            ++  R HTS  ++ V P   +   E+ I E D +IDT+RASGAGGQHVN TDSAVRITH
Sbjct: 189 TETQGRVHTSAITVAVLPEPAENDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S++   G    +IR
Sbjct: 249 LPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSAQVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y       V D R  +   S   V++GDLD    A ++
Sbjct: 309 TYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDTITSALVS 346


>gi|325981709|ref|YP_004294111.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
 gi|325531228|gb|ADZ25949.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
          Length = 359

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 175/343 (51%), Gaps = 4/343 (1%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       RL  LN          ++   + L RE   +   +   +  Q    D   
Sbjct: 5   IMDRLTRLSVRLDELNHLLSSESATADLDHYRKLTREHAEIVPIVELYRSYQHFERDVQT 64

Query: 72  LLELALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E+  + D  +  + E     +++       Q + L     D  + +LE+ AG GG ES
Sbjct: 65  AREMHADLDMRAFAETEIQIGKEKLIQIESEIQKQLLPKDPNDERNIFLEIRAGTGGDES 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+++++ E +     E  G K     I G  AY  LK E G HR+
Sbjct: 125 ALFAGNLFRMYSRYAERQRWQVEIISQSLSEIGGYKEIIAKIIGYGAYSKLKFESGGHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ + P  D+  E+ ++ ++ RIDT+RASGAGGQH+N TDSAV
Sbjct: 185 QRVPVTETQGRVHTSTCTVAIMPEADEVSEVVLNPAELRIDTFRASGAGGQHINKTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           R+TH+PTG+VV+CQ  RSQHKNKAQA ++L A++++ +++ +         S    G   
Sbjct: 245 RVTHLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQMRAQHAEQAAARKSLVGTGERS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       ++DGD+D+   A +A
Sbjct: 305 ERIRTYNF-PQGRVTDHRINLTLYKMDQIMDGDIDELCSALMA 346


>gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9303]
          Length = 319

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 141/307 (45%), Positives = 196/307 (63%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+   +   +  IK  +  + D    LEL   E D  +L E    LQ+++  ++  + E
Sbjct: 1   MRQLDEVKAQLVQIKLWRSAVNDAQATLELYDLEPDDEMLSEAQSGLQQLRQGLDRWELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D   A L ++AGAGGT++QDWA MLLRMYTRWAE    +    E+ +GEEAGI
Sbjct: 61  RLLSGEYDKKGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + + P +D  +E++I E
Sbjct: 121 KSATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL 
Sbjct: 181 KDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLM 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            +  ++R            E  WG QIR+YV  PYQMVKDLRT  E T    V++G+LD 
Sbjct: 241 VIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGELDR 300

Query: 346 FMKATLA 352
           F++  L 
Sbjct: 301 FIQTLLR 307


>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 360

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   L     DP +  +    + L +E   L   +   K  ++ +       EL
Sbjct: 6   LDTFIARYQELAELLSDPDVINDHKRFRDLAKEEADLRPKVGTFKHYKEVVSGIEDTEEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  +  +L+     L ++K E +  + E     L S   D  +  +E+   AGG E+Q
Sbjct: 66  IKETSEEDMLELAKSELDQLKAERDDLEEEIKVLMLPSDPNDDKNIIMEIRGAAGGDEAQ 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY+R+AE + +  E  +    +  G K   L I G   Y  LK E G HR+ 
Sbjct: 126 LFAADLFEMYSRYAESQGWHVEVADASSNDLGGYKEIILQISGDKVYSKLKYESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P + + ++ EI E D R D YRASGAGGQHVN T SAVR
Sbjct: 186 RVPKTESQGRVHTSTATVGVMPEL-EDLDFEIDEKDIRTDIYRASGAGGQHVNKTSSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +THIPTG+ V  Q +RSQ +N+ +A  +LR+++Y+  + Q+++E     ++         
Sbjct: 245 MTHIPTGIQVAMQDQRSQQQNREKAMLILRSRVYDYYQSQEQDEYDEKRKNLVGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       ++ G+LD+ + A +   +
Sbjct: 305 RIRTYNY-PQNRVTDHRINLTLQKLDRIMGGELDEIIDALILADQ 348


>gi|167754864|ref|ZP_02426991.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|237735404|ref|ZP_04565885.1| peptide chain release factor 1 [Mollicutes bacterium D7]
 gi|167704914|gb|EDS19493.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|229381149|gb|EEO31240.1| peptide chain release factor 1 [Coprobacillus sp. D7]
          Length = 358

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 180/349 (51%), Gaps = 13/349 (3%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             + D       R   L     DP +  ++ +   + +E+  L  A    +E ++     
Sbjct: 3   ESMLDRLKTMENRYEELGHMLMDPDIGSDIKKMTEVTKEQSSLQAAYDLYQEYKEVEAGI 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGA 125
               ELA E  D  I +     L  ++  +       + E +     D+ D  +E+   A
Sbjct: 63  SDAKELAKES-DPEIKEMAKMELAELETRLPEIISKLEIELIPKDPNDNKDVIMEIRGAA 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E   +A  L RMY ++AE + +K E +E  D E  G    + ++KG + YG LK E 
Sbjct: 122 GGDEGNIFAGDLYRMYVKYAESQGWKVEVMEAVDAEAGGYSLISFMVKGEDVYGKLKFES 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   ++  R HTS +++ V P + + +++EI++SD RIDTYRASGAGGQH+N 
Sbjct: 182 GSHRVQRVPKTETQGRVHTSTATVLVMPEM-EEVDVEINKSDLRIDTYRASGAGGQHINK 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+V   Q  RSQH NK +A   L +++Y+   Q+ +E   +G   K++
Sbjct: 241 TDSAVRITHLPTGIVAASQDGRSQHDNKDKAMKALVSRIYDFYQQQHDE--QVGSERKSK 298

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G G    +IR+Y   P   V D R  +       ++DG LDD + A +
Sbjct: 299 VGSGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDRIVDGKLDDIITALI 346


>gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
 gi|119361616|sp|Q4L7Z9|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 358

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 192/351 (54%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDSDKLRKYSKEQADLQKTVDVYRDYKSKKEEIAE 60

Query: 72  LLELALEEDDCS---ILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E +D     +L+E S +L+    E+E   +F  +     D  D  +E+ A AGG
Sbjct: 61  IDEMLNETEDKEEIEMLKEESASLKSAIPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-VIATSSEKSQIQNREKALKVLKARLYDMKL--QEEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|186684480|ref|YP_001867676.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
 gi|238691196|sp|B2ITM5|RF1_NOSP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|186466932|gb|ACC82733.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
          Length = 365

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 185/352 (52%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q  + L  +  DP    N  E + + + R  L+  ++  +  +    D + 
Sbjct: 6   LLDKLKSVEQTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTYEIWKTAQEDLIG 65

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAG 126
             E+  E   D  + +  S  ++ ++ ++E+ +       L     D  +  LE+ AG G
Sbjct: 66  AREVYKESASDPELQEMASLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  L++MYTR+A+ + +K   +    GE  G K   L IKG + Y  LK E G
Sbjct: 126 GDEASIWAGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQLKFEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ + P V D +EI I   D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPATESGGRVHTSTATVAIMPEV-DDVEIHIDPKDIEMTTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AV + H PTG+ + C +ERSQ +NK +A  +LRAKLY+++L   E+ A +    ++++
Sbjct: 245 ETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLG--EQQAAVTSMRRSQV 302

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y  +      D R   +  S + VLDGDL+  +++ +++ +
Sbjct: 303 GTGSRSEKIRTYNYKD-NRATDHRLG-QNYSLTPVLDGDLETLIQSCISLDQ 352


>gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
 gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
          Length = 359

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 170/343 (49%), Gaps = 7/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R   L+    DP +  +    + L +E   +   +   +E +  +       EL  
Sbjct: 9   AVADRYDELSELLADPEVLADSQRYQELSKEEGEIRETVEKYREYRKVVDSIAENEELQR 68

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D  +       L  ++ + E  + E     L     D  +  +E+H  AGG E+  +
Sbjct: 69  EKLDPEMDSLVKAELADLRDQKEKLEEEIKVLMLPKDPNDDKNIIMEIHGAAGGDEASLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L  MYTR+AE + +K + ++ +  +  G K   L+I G   Y  LK E G HR+ R+
Sbjct: 129 AADLYNMYTRYAESQGWKVQIVDENATDVGGFKEIVLMISGDKVYSKLKYENGAHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + ++IEI   D R D YR+SGAGGQH+N T SAVR+T
Sbjct: 189 PVTESAGRVHTSTATVGVMPEA-EDVDIEIDPKDIRTDVYRSSGAGGQHINKTSSAVRMT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTG+VV  Q ERSQ +N+ +A  +L+A++Y+    + E+  N    +    G    +I
Sbjct: 248 HLPTGIVVAMQDERSQQQNREKAMRILKARVYDYYQSQEEDAYNEERKNAVGTGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R  +       V++G+L++ ++A +   +
Sbjct: 308 RTYNF-PQNRVTDHRIGLTLNKLDRVMNGELNEIIEALILDDQ 349


>gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
 gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
          Length = 363

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 124/337 (36%), Positives = 206/337 (61%), Gaps = 4/337 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++N +      +   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 27  VELALERVNEVRQSAGLEQLEEDIASLEKKSADSSLWDDPSKAQEILVSLTEVKDRVKLL 86

Query: 60  KEIQDRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            + + ++ +   +++L  E D  D  +L+E S  ++ +   ++  +   LLSG  D   A
Sbjct: 87  NDFKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 146

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 147 VINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYA 206

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRAS 236
           YG++ GE+G HR+VR SP+++   R TSF+ + V P + ++S+ ++I E D  I   RA 
Sbjct: 207 YGYISGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLDISFTRAG 266

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A N L+AKL  +  ++R    
Sbjct: 267 GKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALNRLKAKLLVIAEEQRASEI 326

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
                   +  WG+QIR+YV  PY++VKD+RT  E +
Sbjct: 327 KQIRGDMVKAEWGQQIRNYVFHPYKLVKDVRTGCETS 363


>gi|226942019|ref|YP_002797093.1| PrfA [Laribacter hongkongensis HLHK9]
 gi|254790885|sp|C1D5R7|RF1_LARHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226716946|gb|ACO76084.1| PrfA [Laribacter hongkongensis HLHK9]
          Length = 359

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 176/339 (51%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +     DP + +++   + L RE   L   +      +    D     +L
Sbjct: 9   LAQLSDRLDEVTGLLGDPDVTRDMDAYRRLTREHAELTPVVEQYLAWRQTEADLASARDL 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + + E SD  +R+ +     Q   L     D  + +LEV AG GG E+  +A
Sbjct: 69  LDDPDMKELAEAELSDGQERLAVLELELQKLLLPKDPNDERNIFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+ +++ E +   + +  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 ADLFRMYSRYAERNRWQVEIVSASENDLGGFKEVIARIVGFGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   +E++ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADELAAVELNPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+VV+CQ +RSQHKNKA+A  +L A++ +  +  ++++ A   +S         +IR
Sbjct: 249 LPTGIVVECQDDRSQHKNKARALAVLAARIQDVQQRARQQKEAAERKSLIGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R N+       V+DGDL +   A  A
Sbjct: 309 TYNF-PQGRVTDHRINLTLYRLDAVMDGDLAELTDALTA 346


>gi|239944287|ref|ZP_04696224.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|239990742|ref|ZP_04711406.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           11379]
 gi|291447755|ref|ZP_06587145.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|291350702|gb|EFE77606.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
          Length = 358

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 175/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   +S  +  +    D     E 
Sbjct: 5   VEELIGEHTDLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGDDIETAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  +K E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARMKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPSTESQGRIHTSAAGVLVTPEA-EEVDVEIHANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKT 304
           TDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+  +++  S   
Sbjct: 242 TDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQACV 347


>gi|167041537|gb|ABZ06286.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_008B14]
          Length = 360

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 178/352 (50%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  D  + R + +      P +  +  + + L RER  L+  +      +    +  
Sbjct: 3   SIFDKLDPVLTRYNEIEEAMGRPEVATDFEQVQTLARERASLETLVDIAHRYRKLADEQG 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAG 126
            L  L  E  D  + +   D L   + +VE      +   L     D  D  +E+ +GAG
Sbjct: 63  DLNALLQEGGDAELTKMAKDELDETEKQVEQLAEELKIALLPKDPNDDRDVIVEIRSGAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A+ L R YTR+A+   ++ + ++ +  +  G+      I+G  A+  LK E+G
Sbjct: 123 GNEASLFASDLYRAYTRYAQLHHWQVDVMDSNPSDLGGLNKIVFGIQGKGAFSRLKYERG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V     D ++I+IS  D RID + A G GGQ+VN  
Sbjct: 183 VHRVQRVPDTEAQGRIHTSTATVAVLARA-DEVDIKISPDDLRIDIFHAGGHGGQNVNKV 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVRI + PTG+ V CQ ERSQ+KNK +A  MLRAKLY+ E +K    A   E+ ++++
Sbjct: 242 ATAVRIVYEPTGLTVICQDERSQYKNKTKAMAMLRAKLYDAEQEKI--AAERSETRRSQV 299

Query: 307 G---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G      +IR+Y   P   + D R          ++DG+LDD + + +  ++
Sbjct: 300 GNADRSEKIRTYNY-PQDRITDHRVGASFHGIPRIMDGELDDLIDSLVTWEQ 350


>gi|291166475|gb|EFE28521.1| peptide chain release factor 1 [Filifactor alocis ATCC 35896]
          Length = 354

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      ++   LN    DP    ++ + K  M+E    +  I   +E +    D   
Sbjct: 1   MFDNLKALEEKYEELNKIVADPSTMNDMDKWKAYMKEISDTEPIIQKYREFKQTRDDIEG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGG 127
             ++  EE D  + +     L   +  +E    + + LL      D  +  +E+  GAGG
Sbjct: 61  SKQILEEEKDEELRELAKMELSEKEELMEKVQNELKLLLIPKDPNDEKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMY+ +A  R +K E +  ++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAGVLFRMYSMYASARNWKVEMMSANETGIGGYKEVVFMITGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS S++ V P V D +E+E+  +D R+D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESSGRIHTSTSTVAVLPEV-DDVEVELDMNDVRVDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+TH PTG+V+  Q E+SQ KNK +A+ +L+AKLY+LEL+K ++E+A   +S     
Sbjct: 240 SAVRLTHKPTGIVISMQDEKSQLKNKEKAFKILKAKLYDLELEKAQKELAQERKSQVGSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +      + L+GD+D+ + A +   +
Sbjct: 300 DRSERIRTYNY-PQGRVTDHRIGLTLYKLENFLNGDIDEILDALITTDQ 347


>gi|323339960|ref|ZP_08080227.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
 gi|323092602|gb|EFZ35207.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
          Length = 362

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 106/354 (29%), Positives = 187/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  LFD    +  R   L     DP +  +      L +E   L   +   ++ +    +
Sbjct: 3   MDKLFDRLQMLADRYEELGELLSDPDVIADSKRFMELSKEMADLRETVEKYEKYKQVVQQ 62

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           + D+  +L   L+++  ++++E   + +  K ++E + +   L     D  D  +E+   
Sbjct: 63  IKDDEEMLSTGLDDEMAAMVKEELSDSKNEKQKLEQEIKILLLPKDPNDGKDLIMEIRGA 122

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L I G N +  LK E
Sbjct: 123 AGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKNVWSKLKYE 182

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P  ++ +EI++   D R+D YR+SGAGGQH+N
Sbjct: 183 SGAHRVQRVPVTESAGRVHTSTATVVVMPE-EEDVEIDLDPKDIRVDVYRSSGAGGQHIN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+    K +E +   E+ K+
Sbjct: 242 KTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDY--YKSQEQSEYDENRKS 299

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 300 AVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELDDVIDALVLYDQ 352


>gi|223983553|ref|ZP_03633736.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
 gi|223964481|gb|EEF68810.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
          Length = 359

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 178/345 (51%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  +R + +N +   P +  +      L +E+  L  ++   +E++          E+
Sbjct: 8   LQSIEERYNEINEEMMSPEIVSDPKRLAKLGKEQASLKQSVEAYEELKSLNSHIEQAEEM 67

Query: 76  ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
           A E  D  + +     L+ +  K E    + E LL      D +D  +E+   AGG E  
Sbjct: 68  AKE-HDPELKEMAQMELEELLPKKEALIAKIEVLLIPKDPNDDHDCIVEIRGAAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE + +K + LE+ + E  G    + L+KG   Y  LK E G HR+ 
Sbjct: 127 IFAGDLYRMYVRYAETQGWKIQVLEMSESEAGGFSMISFLVKGGEVYRQLKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  +++ +IEI  +D   +T+RASGAGGQH+N TDSAVR
Sbjct: 187 RVPKTETQGRIHTSTATVLVLPDAEEA-DIEIDPADLTFETHRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           I H+PTG+ V CQ+ RSQH+N+  A  ++RA++YE L  QK EE   +  +         
Sbjct: 246 IVHVPTGITVNCQEGRSQHENRETALRLIRARVYEELTRQKEEEEGAVRRAKIGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R          +++G LDD + A LA ++
Sbjct: 306 KIRTYNY-PQNRVTDHRIGFTINQLDRIMEGKLDDVIAALLAEEQ 349


>gi|242280071|ref|YP_002992200.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
 gi|259585219|sp|C6BYQ4|RF1_DESAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|242122965|gb|ACS80661.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
          Length = 357

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  +  DP ++ N    + +      L + ++  +E +    D     E+
Sbjct: 5   LEDIERSFMDLEQELADPEVYNNQERYRKVTMAHAELGDVVAAFREYKQLSADLEDNKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131
           A +  D  I +     +  IK  +   + E  L        D  +  LE+ AG GG E+ 
Sbjct: 65  AKDS-DPEIREMAEMEIAEIKDRLPKLEEELKLLLLPKDPMDGKNIILEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE   +K E +  +     G K     I G   Y  +K E G HR+ 
Sbjct: 124 LFAADLFRMYSRFAESNGWKVEVMNSNPTGTGGFKEIIAAISGSRIYSMMKYESGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ + P   + +++++   D RID +RASG GGQ VNTTDSA+R
Sbjct: 184 RVPATETQGRIHTSAATVAIMPEA-EEVDVQVRNEDLRIDVFRASGPGGQSVNTTDSAIR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNKA+A  +L ++L + E  K  + A + E  + ++G G  
Sbjct: 243 ITHLPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQAEQDK--QHAEMAEQRRAQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       V++GD+ + +++ ++
Sbjct: 301 SERIRTYNF-PQGRVTDHRINLTLYKLDAVIEGDMQELVESLIS 343


>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
 gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
          Length = 363

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 121/341 (35%), Positives = 186/341 (54%), Gaps = 7/341 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   +R   ++       +  N  E   L RE   L   ++  +E ++          + 
Sbjct: 12  EALERRYQEVSDLLGQNEVISNRSEFTKLSREHAELAKLVAAWQEYRELRTQESEARAMV 71

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D  + +   + L+ ++  +E K+       L     D  +  LE+ AG GG E+  
Sbjct: 72  ASESDAEMRELAREELRALQESLEVKEQHIKILLLPKDPNDGKNILLELRAGTGGDEAAL 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ +KTE + + DG   G+K A +LI G + Y  LK E GVHR+ R
Sbjct: 132 FAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYESGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++I++ E D RID YR+SG GGQ VNTTDSAVR+
Sbjct: 192 VPATESQGRVHTSAATVVVMPEA-EEVDIKLEEKDLRIDVYRSSGPGGQSVNTTDSAVRV 250

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+VV CQ E+SQHKNKA+A  +LR+++ ++E+ K+E        S  + G    +
Sbjct: 251 THLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVKSGDRSEK 310

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+ + + S VLDGDL D + A  A
Sbjct: 311 IRTYNF-PQDRLTDHRINLTRHNLSSVLDGDLYDVVDALRA 350


>gi|86152274|ref|ZP_01070485.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|121613478|ref|YP_001001255.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148925756|ref|ZP_01809444.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157415831|ref|YP_001483087.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|166223544|sp|A1W1L4|RF1_CAMJJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047202|sp|A8FNS3|RF1_CAMJ8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840763|gb|EAQ58014.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|87249710|gb|EAQ72669.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|145845766|gb|EDK22857.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157386795|gb|ABV53110.1| peptide chain release factor RF-1 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748468|gb|ADN91738.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315931656|gb|EFV10617.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 355

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 182/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|222823061|ref|YP_002574634.1| peptide chain release factor 1 [Campylobacter lari RM2100]
 gi|254790870|sp|B9KE98|RF1_CAMLR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222538282|gb|ACM63383.1| peptide chain release factor 1 [Campylobacter lari RM2100]
          Length = 355

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 187/339 (55%), Gaps = 9/339 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   LNT   D ++  ++ +   L +E+++L+  +   KE    L D      L  + + 
Sbjct: 12  RFDELNTLLSDVNISNDISKMTALSKEQKNLEPIVEKAKEYLKTLDDIEENKLLLSDPEL 71

Query: 82  CSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + +E   NL+ +K    E  +   L     D  + +LE+ AG GG E+  +   L++ 
Sbjct: 72  GELAKEELKNLELLKPNLEEELKILLLPKDPNDDKNIFLEIRAGTGGDEASLFVGDLVKA 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+AE R +K E +   +G   G K   +LIKG  AY  LK E G HR+ R+   +S  
Sbjct: 132 YIRYAENRDYKYEIVSSSEGSVGGFKEIIILIKGNGAYSRLKYEGGTHRVQRVPETESQG 191

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ + P V D +EI+I+ +D +ID  R+SG GGQ VNTTDSAVRITHIPTG+V
Sbjct: 192 RVHTSAITVAIMPEV-DDVEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPTGIV 250

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V  Q  +SQHKNK  A  +L+A+L+E++  ++E +A   E+ K+++G G    +IR+Y  
Sbjct: 251 VVNQDGKSQHKNKESAMKVLKARLFEMQ--EQERLAKESEARKSQVGSGDRSERIRTYNF 308

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
            P   + D R N+       +L+G L D+ ++  +A  +
Sbjct: 309 -PQNRISDHRINLTLYRLDAILEGGLFDEIVEPLIAYYQ 346


>gi|195973766|gb|ACG63448.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 155/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWNNPEYAQNLGRQKVELENVVHNCEYISETLETLTELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|308071169|ref|YP_003872774.1| peptide chain release factor 1 [Paenibacillus polymyxa E681]
 gi|305860448|gb|ADM72236.1| Peptide chain release factor 1 (RF-1) [Paenibacillus polymyxa E681]
          Length = 355

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 183/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKNVVEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRI---KLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++ +   K E++ K +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKLDDEMREMVKMEIEELSVRKRELDEKIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+A+ + ++ E ++ +  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEIS+ D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVSVMPEA-EEVDIEISDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG++  CQ  +SQ+ NK +A  +LRA++ +  + ++EE A      K+++G
Sbjct: 240 SAVRVTHMPTGIMATCQDGKSQNSNKEKALQVLRARISD--MLRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQ 347


>gi|312897943|ref|ZP_07757356.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
 gi|310620977|gb|EFQ04524.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
          Length = 361

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 173/344 (50%), Gaps = 8/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               +   L  +  DP +     E + L +E   L   I   ++ +D         E+  
Sbjct: 8   AVENKFIDLEQRISDPSVIARQDEWQKLTKEHASLAPIIETFRKYKDVSATIADDKEIIA 67

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  D  +     + L  +  E E  + E     L     D  +  +E+  GAGG E+  +
Sbjct: 68  DGSDAELTAMAKEELSELTKEQEALEEELHVLMLPKDPNDDKNVIMEIRGGAGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           A  L RMY+++ EK + +K   +  +  E  G K     ++G   YG LK E GVHR+ R
Sbjct: 128 AGDLFRMYSKYIEKQKGWKASIISSNAPELGGYKEVIFSVEGDGVYGKLKYESGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + +EI ++  D R+D +RASGAGGQHVN T SAVR+
Sbjct: 188 VPVTESGGRIHTSTATVAVLPEA-EDVEINLNMEDVRVDYFRASGAGGQHVNKTSSAVRM 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           THIP+G+VV+CQ ERSQ +N+A+A  +L+A+L     ++          S+   G    +
Sbjct: 247 THIPSGIVVECQDERSQLENRAKAVRVLKARLLAQAEEEANAEVTEARRSQVGTGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +R+Y   P   V D R N+      ++++GD+D+F++A    ++
Sbjct: 307 VRTYNY-PQGRVTDHRINLTLYKLENIMNGDIDEFIQALAEARR 349


>gi|259418822|ref|ZP_05742739.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
 gi|259345044|gb|EEW56898.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
          Length = 444

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 179/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     D     ++     L +E   L      I+  +  L D     E+
Sbjct: 101 LEQILQRYQYLEAAMAD-GAGGDIA---KLAKEYSDLRPVAEQIRAYRQLLSDLAEAEEM 156

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E    L+    E E+  Q   L   EADS  A LE+  G GG E+  +A
Sbjct: 157 LADPDMKALAEEEIPTLKAALPEAEHALQLALLPKDEADSRAAILEIRPGTGGDEAALFA 216

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE + +K + +E    E  G+K     I G   +  LK E GVHR+ R+ 
Sbjct: 217 GDLYRMYSRYAEAQGWKIDVIEEQVSELGGLKELVARINGDGVFARLKYESGVHRVQRVP 276

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 277 VTESGGRIHTSAATVAVLPEA-EDVDIKIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 335

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 336 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSERSADRASQVGSGDRSERIR 394

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       ++ GDLD+ + A ++
Sbjct: 395 TYNF-PQGRMSDHRINLTLYKLEQIMGGDLDEIIDALIS 432


>gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
 gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
          Length = 365

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 119/345 (34%), Positives = 186/345 (53%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   +      P +  +  + + L +E + L        E +         LE+
Sbjct: 9   LEKIAKKFKEIEENLGKPEVIADQKKFQTLAKEHKELQPIYDTYMEYKKTRQGIEEALEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
               ++  +++   +  + ++   E  +   + LL      D  +  LE+ AGAGG E+ 
Sbjct: 69  IEAGEEEELVELAKEEKKELEKRAEELEGELKKLLIPKDPNDEKNVILEIRAGAGGEEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E L +++    GIK     I G  AY  LK E GVHR+ 
Sbjct: 129 LFAQDLFRMYCRYAERKGWKVEILSMNETGLGGIKEVVATISGKGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ + P   + +EIEI ESD +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 189 RIPVTESGGRIHTSTATVAILPEA-EEVEIEIKESDLKIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           ITH+PTG+VV C  ERSQ +N+ +A  +LRA+L EL E Q++E++ +  ++         
Sbjct: 248 ITHLPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQKEKMDSARKAQVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +   +  + LDGDLD+ + A  A ++
Sbjct: 308 KIRTYNF-PEGRVTDHRIKLTLYNLQEFLDGDLDEMIDALAAAEQ 351


>gi|302785810|ref|XP_002974676.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
 gi|300157571|gb|EFJ24196.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
          Length = 412

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 183/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A Q    L  K  DP +  +  E + L +    ++  ++  ++ ++   +   L E+
Sbjct: 59  LDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEM 118

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   +    +K  +    EY +   L S   DS +  LEV AG GG E+ 
Sbjct: 119 IKSSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAG 178

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L+RMY ++AE+ ++    +   + E+ G K   L I G   Y  LK E GVHR+ 
Sbjct: 179 IWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQ 238

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++AV 
Sbjct: 239 RVPATESQGRVHTSTATVAIMPEV-DEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVD 297

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E   I    ++++G G  
Sbjct: 298 LFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRSQVGTGAR 355

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D RT I        L G+++  ++A  A+++
Sbjct: 356 SEKIRTYNYKD-NRVSDHRTKI-NFDLDSFLSGNIESAVQACAAMEQ 400


>gi|282889838|ref|ZP_06298377.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500412|gb|EFB42692.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 354

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 184/342 (53%), Gaps = 10/342 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             + +L  L     +P ++Q+    + L +E  +L    S  +++           E+  
Sbjct: 7   KLLSKLPDLEEALGNPEVFQDQKRYRALTQEHAYLSELKSVWEKMVKSNKQIEDNQEMLA 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           +E +  + +   ++ + ++  VE  Q   E+LL      D  +  +E+ AG GG E+  +
Sbjct: 67  DEANAELKEVLEEDTRNLRSLVEKLQVDLENLLVPPDPNDHRNTIVELRAGTGGDEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
               +RMY  +A+ + ++ E L     E  G K   +++ G N Y +L  E G HR+ R+
Sbjct: 127 VGDCVRMYKLYADSKGWRYELLSCTPSEMGGFKEYVMVLSGQNVYRFLHYEGGTHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ +    D+  E+ I E D R+DTYR+SGAGGQHVNTTDSAVR+T
Sbjct: 187 PETEAQGRVHTSAMTVAILLEPDEDTEVVIDEKDLRVDTYRSSGAGGQHVNTTDSAVRLT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H PTG+VV CQ+ERSQHKNK +A  +L+AK+ E E +K++E   I  +   ++G G    
Sbjct: 247 HNPTGIVVYCQEERSQHKNKEKAMRLLKAKIVEAEQRKKQE--EIASNRSQQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+ + +   V++GDLD+   A + 
Sbjct: 305 RIRTYNF-PQNRITDHRINLTRYNLDRVMEGDLDEITLALVT 345


>gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 357

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  ++   L     DP+   +    + L +E   L   +           +   
Sbjct: 1   MLDKLQSIKEKHLDLEQLLADPNAATDQARFRKLNKEYSDLREIVQAYDAYGQAKTELDQ 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             +L   E D  + +     +  ++ ++   +       L   EADS +  +E+ AG GG
Sbjct: 61  SKKLLDSESDPEMRELVQAEISELQKKLPELEQHLKVLLLPKDEADSRNVIVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  +LRMY R+AEK+ +K E L  ++     G +  TL + G + YG +K E G
Sbjct: 121 EEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGFREITLEVSGHDVYGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAVSVAVLPEA-EEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTE 305
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLR KLY++ L ++ ++ A++  S  T 
Sbjct: 240 ETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLYDILLAEQVQQRADLRRSMVTT 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                +IR+Y   P   V D R      +   +L G++ D + A 
Sbjct: 300 GDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQILQGEIQDIIDAL 343


>gi|46446286|ref|YP_007651.1| peptide chain release factor 1 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|61214629|sp|Q6MDH3|RF1_PARUW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46399927|emb|CAF23376.1| probable translation releasing factor RF-1 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 359

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 197/342 (57%), Gaps = 10/342 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++RL+ +     +PH++ +  + + L +E  +L+N      E +D         EL  
Sbjct: 8   ELLERLAEVEEVLGNPHVYDDQKKYRALTQEHAYLNNLKKSWDEKKDLEKQLEDNQELLK 67

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQF--ESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            E D    +   D++++++  V+  Q   E+LL      D+  + +E+ AG GG E+  +
Sbjct: 68  IEKDLEFAEVLKDDIRQLQSRVQELQLLIENLLVPPDPLDNRPSIIELRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
               +RMY  +A+++ ++ E L     E  G K   +++ G N Y +++ E G HR+ R+
Sbjct: 128 VGDCVRMYKLFADRKGWRYELLSCTPSEMGGFKEYVMVLSGENVYRFMQYEAGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  +I V P  D++ EI++ E D RIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 188 PATEAQGRVHTSAITIAVLPEPDENEEIDLDEKDLRIDTYRSSGAGGQHVNTTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV CQ+ERSQHKNK +A  +L+AK+ E+E QK+++   +  +   ++G G    
Sbjct: 248 HVPSGIVVYCQEERSQHKNKDKAMRLLKAKMAEIEQQKKQQ--ELASTRAQQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+ K +   V++GDL++   A +A
Sbjct: 306 RIRTYNF-PQNRITDHRINLTKYNLDYVINGDLEEITSALVA 346


>gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
 gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
          Length = 361

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 178/343 (51%), Gaps = 7/343 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +   +R   ++    DP +  +  + + L RE   L+  +    E Q+   D    
Sbjct: 6   LLKLETLSERHEEVSALLGDPGVISDQDQFRRLSREFSELETVVKCFGEYQELQGDLEAA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            E  L +DD  + +     +   +          Q   L     DS++ +LE+ AG GG 
Sbjct: 66  -ESMLADDDADMREMAKTEISEGEARREALEAELQLLLLPRDPKDSHNVFLEIRAGTGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  L RMY+R+AE++ ++ E L    GE  G K     I+G + Y +LK E G H
Sbjct: 125 EAAIFSGDLQRMYSRFAERQGWRIEVLSERPGEHGGYKEIISRIEGSDVYAYLKFESGAH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ +    ++   +EI+++D R+DTYRASGAGGQHVN TDS
Sbjct: 185 RVQRVPETESQGRIHTSACTVAILAEPEELEAVEINKADLRVDTYRASGAGGQHVNKTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIG 307
           AVR+TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL    E  +  E A    +      
Sbjct: 245 AVRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLDSVAEESQASEQAEQRRNLVGTGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R N+      +V+ GD++  +   
Sbjct: 305 RSDRIRTYNF-PQGRVTDHRINLTLYKLDEVMAGDMEAVLGPL 346


>gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
 gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
          Length = 351

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/337 (35%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++R   +     +  +  +  + K L +E   L+   +  +   +   DN+  LE  L 
Sbjct: 1   MLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEA-KDNVSSLEELLA 59

Query: 79  EDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            +D  +     + L   K +VE      Q+  +     D  + YLE+ AG GG E+  +A
Sbjct: 60  GEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEAAIFA 119

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ ++ E +    GE  G K     I G   Y  LK E G HR+ R+ 
Sbjct: 120 GDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRVQRVP 179

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA+RITH
Sbjct: 180 ETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRITH 239

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           IPTGVVV+CQ ERSQHKN+++A ++L+ +L + E  K R+E A   +S         +IR
Sbjct: 240 IPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKSLVGTGDRSERIR 299

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+     +DV++G L   ++  
Sbjct: 300 TYNY-PQGRLTDHRINLTIYQLNDVMEGKLSLVVEPL 335


>gi|172058704|ref|YP_001815164.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
 gi|229576657|sp|B1YEH9|RF1_EXIS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171991225|gb|ACB62147.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
          Length = 352

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 103/348 (29%), Positives = 177/348 (50%), Gaps = 15/348 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   LN    DP + ++  + + + +E+  L   +   +  +D++     
Sbjct: 1   MLDRLSALEDRYEKLNDLLADPAIIKDTNQLREVSKEQSQLAPTVEVYRVYRDKMEAYQE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
              +     D  +     + +  ++ E++  + +     L     D  +  +E+   AGG
Sbjct: 61  ARHMLT---DPEMRDLAKEEVAVLEPEIKDLETKLKALLLPKDPNDDKNVIVEIRGAAGG 117

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L +MY+++AEK+ +K E ++    E  G K    ++KG  AY  LK E G 
Sbjct: 118 DEAALFAGDLFKMYSKFAEKQNWKIEIIDASYTELGGYKEIIFIVKGSGAYSKLKYENGA 177

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+EI + D R+DT+ +SG GGQ VNTT 
Sbjct: 178 HRVQRVPSTESGGRIHTSTATVAVLPEA-EDVEVEIHDKDVRVDTFTSSGPGGQSVNTTQ 236

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V  CQ E+SQ KNK +A  +LRA++Y+    +RE+ A   E  K+ +G
Sbjct: 237 SAVRVTHVPTGIVASCQDEKSQIKNKEKAMKVLRARVYD--KIQREQQAEYDEKRKSAVG 294

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y       V D R  +       +L G++D+ +   + 
Sbjct: 295 TGDRSERIRTYNFA-QNRVTDHRIGLTIQKLDRILQGEMDEVIDTLVM 341


>gi|108759492|ref|YP_633064.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
 gi|20139339|sp|Q93NC7|RF1_MYXXA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361565|sp|Q1D2Q9|RF1_MYXXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14517940|gb|AAK64443.1|AF377339_4 peptide chain release factor RF-1 [Myxococcus xanthus]
 gi|108463372|gb|ABF88557.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
          Length = 362

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 102/339 (30%), Positives = 181/339 (53%), Gaps = 6/339 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-LILLE 74
            ++  +R   L     +P +  +    + + +ER  L+  +   +  +  L D   +   
Sbjct: 5   LEDVERRFERLTADLSNPDVLADSARLQKVSKERAGLEKLVEAFRTYRKVLADLSEVEAW 64

Query: 75  LALEEDDC-SILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L   + D  +  +E+   L+  + E+E   +   L     D  +  LE+ AGAGG E+  
Sbjct: 65  LGSSDADEKAFARESLPGLKEQRDELEASLKILLLPKDPNDEKNVILEIRAGAGGDEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  +++MY R+A++R +K + L++  G   G+K AT+ + G   +  +K E GVHR+ R
Sbjct: 125 FAEEVMQMYLRYADRRGWKADILDMSPGNAGGVKDATVTLSGDAVFSSMKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P   + ++++++ +D  +   R++G+GGQ VNTTDSAVR+
Sbjct: 185 VPATETQGRIHTSTITVSVMPEA-EDVDVQVNPADIEMQVMRSTGSGGQSVNTTDSAVRL 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQ 311
            H PTG+VV+CQQE+SQ KN+  A  MLRAKLY++E ++ R E  +   +         +
Sbjct: 244 IHHPTGIVVKCQQEKSQLKNRTMAMRMLRAKLYDIEQERIRNERDSARRAQVGTGDRSEK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  +   +   V+ GD++D + A 
Sbjct: 304 IRTYNF-PQDRLTDHRIGLTVHNLPGVMAGDVEDVITAC 341


>gi|320354565|ref|YP_004195904.1| peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123067|gb|ADW18613.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfobulbus
           propionicus DSM 2032]
          Length = 356

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 177/347 (51%), Gaps = 9/347 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  ++L  L  +  DP L  +    + ++RE  ++           +       
Sbjct: 1   MFDNLRDIDEKLGVLERQLADPQLVSDQQRYREIVREHANVAKIAELYAAYTNVRAQIAG 60

Query: 72  LLELAL-EEDDCSILQETSDNLQRI---KLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
             EL   E+DD  +++     ++ +   + E+E   +   L     D  + +LE+ AG G
Sbjct: 61  NQELIRTEQDDPDLVELAKAEIEELVVKQTELEQAIRIRLLPKDPNDDKNIFLEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L RMY+R+AE + +K E +  +     G K    L+ G   Y  LK E G
Sbjct: 121 GDEAALFVADLFRMYSRYAEMQGWKVEVMSSNPIGIGGFKELIALVSGTQVYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ + P   + +++ I  ++ + D YR+SG GGQ VNTT
Sbjct: 181 VHRVQRVPDTETQGRIHTSAVTVAIIPEA-EEVDLHIEPNELKFDVYRSSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTE 305
           DSAVR+TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L + +E ++ + I+   +S    
Sbjct: 240 DSAVRVTHLPTGLVVTCQDEKSQHKNKAKALQVLRARLLDKMEQERHDRISEERKSQVGS 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                +IR+Y   P   V D R N+       V+ G LDD +   + 
Sbjct: 300 GDRSERIRTYNF-PQGRVTDHRINLTLYRLDQVMAGMLDDIILPIIT 345


>gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Prosthecochloris vibrioformis DSM
           265]
 gi|189039984|sp|A4SCF1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 357

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L     DP    +    + L +E   L   +               
Sbjct: 1   MFDNLQSIKERHLDLERLLADPDAAGDQTRFRKLNKEYSDLREIVETYDRYSHIKKQLED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGG 127
             +L   E D  +     + ++ ++ ++   + E     L   EADS +  LE+ AG GG
Sbjct: 61  SRQLLKNEQDQEMKALVEEEIEELQRQIPALEQEIKVLLLPKDEADSRNVILEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +   L RMY R+AEK+ +  + L+ ++     G + AT+ I G + +G +K E G
Sbjct: 121 EEAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGGFREATISITGHDVFGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D R+DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLPEA-EEVDVEIRKEDLRLDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTE 305
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLRAKL++++L ++++  A++  +    
Sbjct: 240 ETAVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLFDIQLAEQQQARADLRRTMVAT 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                +IR+Y   P   V D R      +    + G++ + + A 
Sbjct: 300 GDRSAKIRTYNY-PQSRVTDHRIGFTTHALPQFMQGEIGELIDAL 343


>gi|301299965|ref|ZP_07206192.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852447|gb|EFK80104.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 360

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 190/354 (53%), Gaps = 12/354 (3%)

Query: 10  LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDR 65
           +  LFD    ++ R   L     DP +  +      L +E   L   +      KE+  +
Sbjct: 1   MDKLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMVDLRETVEKYNKYKEVTQQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           + D+  +L   L+++  S+++E   N +  K+++E + +   L     D  +  +E+   
Sbjct: 61  ISDDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E
Sbjct: 121 AGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N
Sbjct: 181 SGAHRVQRIPVTESAGRVHTSTATVVVMPE-EEDVEIELDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+     ++E +    + K+
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDY--YAQQEQSEYDANRKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 298 AVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350


>gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166223599|sp|A1AX02|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 363

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P +  +V +   L  ER  L       +       +      L
Sbjct: 9   LEQLSMRLEEVDVMLSNPKVASDVKKFTKLSIERAQLTPVNQQFQAYLSHHRNLEDAK-L 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  I     + +  +K ++++   E     L     DS +  +E+ AG GG E+ 
Sbjct: 68  MLLEDDMDIKAMAKEEMLDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAGTGGNEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +++ L +MY+R+ EK+K++ E +    GE  G K     I G   Y  LK E G HR+ 
Sbjct: 128 IFSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  +I + P V++  E+ I+ SD R+DT+RASGAGGQHVN T+SAVR
Sbjct: 188 RVPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVNKTNSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITHIPTG V +CQ  RSQHKNKAQA  +L +++++L+  ++E+      + K  IG G  
Sbjct: 248 ITHIPTGTVAECQDGRSQHKNKAQALLVLASRIFDLQ--QQEQHKEQASTRKELIGSGDR 305

Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+     S++++G+L+  ++  +  ++
Sbjct: 306 SQRIRTYNY-PQGRITDHRINLTLYKLSEIMEGNLNAIIEPLIVEQQ 351


>gi|261416348|ref|YP_003250031.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372804|gb|ACX75549.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 355

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 177/341 (51%), Gaps = 8/341 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +++   L ++  +P +  +      + ++ + ++ A+   KE    + D     + AL
Sbjct: 7   KLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDDLDE-YKAAL 65

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            + D  ++      +  I+ ++    +  Q   +     D  +A LE+  G GG ES  +
Sbjct: 66  GDSDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGTGGDESALF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY  + +K  +K    ++ +G   G K   + I+G + YG LK E GVHR+ R+
Sbjct: 126 AGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFESGVHRVQRV 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ + P   + +++EI E+D  +DTYR+SGAGGQ++N TDSAVR+T
Sbjct: 186 PETETQGRVHTSAATVAILPEA-EEVDVEIREADIHMDTYRSSGAGGQYINKTDSAVRLT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQI 312
           HIPTGVVV CQ ERSQ +N+  A  MLR+K+ +  + K+E E A   ++         +I
Sbjct: 245 HIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKEEAANRKALVGTGDRSAKI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           R+Y   P   V D R  +   +   V+ GDLD+ +      
Sbjct: 305 RTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMA 344


>gi|302759937|ref|XP_002963391.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
 gi|300168659|gb|EFJ35262.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
          Length = 412

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 183/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A Q    L  K  DP +  +  E + L +    ++  ++  ++ ++   +   L E+
Sbjct: 59  LDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEM 118

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   +    +K  +    EY +   L S   DS +  LEV AG GG E+ 
Sbjct: 119 IKSSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAG 178

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L+RMY ++AE+ ++    +   + E+ G K   L I G   Y  LK E GVHR+ 
Sbjct: 179 IWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQ 238

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++AV 
Sbjct: 239 RVPATESQGRVHTSTATVAIMPEV-DEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVD 297

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E   I    ++++G G  
Sbjct: 298 LFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRSQVGTGAR 355

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D RT I        L G+++  ++A  A+++
Sbjct: 356 SEKIRTYNYKD-NRVSDHRTKI-NFDLDSFLSGNIESAVQACAAVEQ 400


>gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 361

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 184/345 (53%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V++   +      P +  +  + + L +E + L        E +         +E+
Sbjct: 9   LDRIVEKFKEIEESLGKPEIIADQKKFQALAKEHKELQPIYETYMEYKKTKQGIEEAIEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
               ++  +++   +  + ++  +E  + E     +     D  +  LE+ AG GG E+ 
Sbjct: 69  IESANEDELIELAKEEKKELEERLEQLEAELKKLLIPKDPNDEKNVILEIRAGTGGEEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AEK+ +K E L +++    GIK     I G  AY  LK E GVHR+ 
Sbjct: 129 LFAQDLFRMYTRYAEKKGWKVEILSLNETGLGGIKEVIATISGKGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ + P   + ++I I E D +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 189 RIPVTESGGRIHTSAATVAILPEA-EEVDIHIDEKDLKIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           ITHIPTG+VV C  ERSQ +N+ +A  +LRA+L EL E Q++E++ +   S         
Sbjct: 248 ITHIPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQKEQLDSARRSQIGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +   +  + LDG+LD+ + A  A ++
Sbjct: 308 KIRTYNF-PENRVTDHRIKLTLYNLEEFLDGELDEMIDALTAAEQ 351


>gi|189345639|ref|YP_001942168.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
 gi|238692166|sp|B3EE55|RF1_CHLL2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189339786|gb|ACD89189.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
          Length = 357

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  ++   L  +  DP    +    + L +E   L   +               
Sbjct: 1   MFDKLQSIKEKHLDLEQQLADPSAASDQNRFRKLNKEYSDLKEIVHAFDRYSLARKQLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
             EL   E D  + +     ++ ++ ++   + +     L   EADS +  +E+ AG GG
Sbjct: 61  SRELLGSEKDPQMRELVQMEIEDLQEKLPELEQQLKVLLLPKDEADSRNVIMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  LLRMY R+AE++ +K   L+  +     G +  TL + G + +  +K E G
Sbjct: 121 DEAALFAADLLRMYQRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLPEA-EEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLR KLY+++L ++++       S    
Sbjct: 240 ETAVRITHLPTGIVAACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADLRRSMVST 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R      +   ++ G++ D ++A 
Sbjct: 300 GDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGEIGDVIEAL 343


>gi|195973762|gb|ACG63446.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|195973768|gb|ACG63449.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|118594305|ref|ZP_01551652.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
 gi|118440083|gb|EAV46710.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
          Length = 359

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 180/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  LN +       +++   K + +E   +   +   +E      D     E+
Sbjct: 9   LNALQNRLEELNDELSSEEATKDMDRYKKISKEHSDILPVVDIYQEFTRHTKDMNDAKEM 68

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  S  Q E   N  +I +  E  Q   L     D  + +LE+ AGAGG ES  +A
Sbjct: 69  LSDPEMKSFAQDEIDANKAKIIMLEEQLQTLLLPKDPNDEKNIFLEIRAGAGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE+ +++ E +  ++ E  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDIFRMYSRYAERMRWQLEVISSNESEVGGFKEIIAKVIGQGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+  +++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTETQGRIHTSACTVAVLAEADEISDVDINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ +RSQH+NKAQA ++L A++ + ++   ++ + I    K+ IG G    +
Sbjct: 249 APTGIVVECQDDRSQHRNKAQAMSILAARIKDAQIN--DQQSKIATERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   + D R N+       V+DGDL + + 
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDFVMDGDLTELID 342


>gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226739101|sp|B8DLL6|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris]
 gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 357

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 173/343 (50%), Gaps = 14/343 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +N  +R   L  +     ++ +    + L +    L   +      KE++  L DN  L
Sbjct: 5   LENLERRFEDLEQQLASSEVFNDQDRYRKLTKAHADLKEVVDVFRRYKELRQNLADNKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L+ A    D  I     +  + ++  +    +  Q   L     D  +  +E+ AG GG 
Sbjct: 65  LDDA----DPEIRSMAHEEAKSLESAIPEIEQELQLLLLPKDPLDEKNTIVEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE R +K E L  ++ +  G K    LI G   Y  LK E G H
Sbjct: 121 EAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVYSRLKFESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ + P   + +++EI   D RID +RASGAGGQHVN T+S
Sbjct: 181 RVQRVPATESQGRIHTSAATVAILPEA-EEVDVEIRPDDIRIDVFRASGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307
           AVRITH+P+G+VV CQ E+SQHKNKA+A  +L ++L + E  ++  E+A    S      
Sbjct: 240 AVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHNEMAADRRSQVGSGD 299

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R N+   S   V++G+      A 
Sbjct: 300 RSERIRTYNF-PQGRVTDHRINLTLYSLDRVMEGEAQALFDAL 341


>gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB]
 gi|119361624|sp|Q2LWU9|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus
           aciditrophicus SB]
          Length = 357

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 169/343 (49%), Gaps = 9/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +       +   +E   L + +   ++ +          +L
Sbjct: 5   LKEVESRYLELEKLLSDPTVVTRQSLYQKYAKEHADLRDLVEVFRKYEKVGAAIEEAQQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L  ++  +    E  +   L     D  + +LE+ AG GG E+ 
Sbjct: 65  LR-GDDEELKEIAREELPELRQHLAGLEERLKVLLLPRDLNDDRNVFLEIRAGTGGDEAG 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            +   L RMY R+AE R++K E +         G K     I G  AY  LK E GVHR+
Sbjct: 124 LFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIASIAGQGAYSQLKYESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ + P   D +E+ I  +D RID + +SG GGQ VNTTDSAV
Sbjct: 184 QRVPVTEAQGRIHTSAVTVAIMPEA-DEVEVTIDPNDLRIDVFHSSGHGGQSVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWG 309
           RITH+PTG+VV CQ E+SQ KNKA+A  +LRA+L ++ ++K+ +EI+   +S        
Sbjct: 243 RITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKKQSDEISEARKSQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R  +   S  ++L GD+ +F+ A  A
Sbjct: 303 ERIRTYNF-PQGRVTDHRVGLTLYSLENILGGDIQEFIDALTA 344


>gi|327399685|ref|YP_004340554.1| peptide chain release factor 1 [Hippea maritima DSM 10411]
 gi|327182314|gb|AEA34495.1| Peptide chain release factor 1 [Hippea maritima DSM 10411]
          Length = 354

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 124/335 (37%), Positives = 186/335 (55%), Gaps = 4/335 (1%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
             ++ T+  DP++  ++   K L  E + L   +   KE ++ L       EL  +E+  
Sbjct: 13  YKYIETQLSDPNVVGDLDRYKSLSSEIKKLTPIVEKAKEYRNILRQIEENEELLEDEELK 72

Query: 83  SILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            + +E   +L+    E+E + +   L   EAD  D  LE+ AG GG E+  +A  L RMY
Sbjct: 73  ELAKEELKHLKERLPELEQEIKLLLLPKDEADDRDVILEIRAGTGGEEAALFAADLFRMY 132

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           +R+AE + FK E L     +  GIK     IKG  AY   K E G HR+ RI   +S  R
Sbjct: 133 SRYAENKGFKVEVLSKSLSDTGGIKEIIAEIKGKGAYHLFKHESGTHRVQRIPITESQGR 192

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P   +++++EI   D RID +RASG GGQHVNTTDSAVRITH+PTG+VV
Sbjct: 193 IHTSAATVAVLPEA-ENVDVEIKPEDLRIDVFRASGHGGQHVNTTDSAVRITHLPTGMVV 251

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPY 320
            CQ E+SQ KNK +A  +L+++LY+   +K+ EE A   +S         +IR+Y   P 
Sbjct: 252 SCQDEKSQLKNKEKALKILKSRLYDFYRRKKDEERAKERKSQIGSGDRSERIRTYNF-PQ 310

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             V D R N+       +++GDLD+ ++A +  ++
Sbjct: 311 GRVTDHRINLTLYKLDSIMEGDLDELIEALIVDEQ 345


>gi|86149291|ref|ZP_01067522.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|218563201|ref|YP_002344981.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|20139359|sp|Q9PM63|RF1_CAMJE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840073|gb|EAQ57331.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|112360908|emb|CAL35709.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|284926807|gb|ADC29159.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927641|gb|EFV06972.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929077|gb|EFV08310.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 355

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 181/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421]
 gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421]
          Length = 371

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 176/345 (51%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N   +   +  + +DP L +NV   K +MR+  +L   +                  L
Sbjct: 20  LENLRNQWKQVELEVQDPDLVKNVARYKDVMRQHGYLSKLMDEYDFYLQTEKQLQEAHAL 79

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + +  ++ ++E  +       +     +  +  +E+  G GG E+ 
Sbjct: 80  MQEESDHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIMEIRGGTGGDEAA 139

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MYT +AE + +  E ++ ++ E  G K     I G   YG L+ E GVHR+ 
Sbjct: 140 LFAADLFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGSLRYESGVHRVQ 199

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   + + R HTS  ++ V P  +++ EI I   D R+D  RA G GGQ VNTTDSAVR
Sbjct: 200 RVPETEGSGRIHTSAVTVAVLPEAEET-EIVIKPEDLRVDVMRAGGPGGQSVNTTDSAVR 258

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K+ +E A   +S         
Sbjct: 259 LTHIPTGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQERAQNRKSQVGSGDRSE 318

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
           +IR+Y   P   V D R N+       VL GDLD+ ++   +A +
Sbjct: 319 RIRTYNF-PQNRVTDHRINLTLYQLDAVLQGDLDEIIEPLCIAAR 362


>gi|195973774|gb|ACG63452.1| peptide chain release factor 2 [Francisella noatunensis]
 gi|198417115|gb|ACH87844.1| PrfB [Francisella noatunensis subsp. noatunensis]
          Length = 294

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENIVHNCEHISETLETLTELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|296271838|ref|YP_003654469.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
 gi|296096013|gb|ADG91963.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
          Length = 355

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 177/340 (52%), Gaps = 15/340 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R   +N     P +  ++     L +E+  ++  ++  KE    L D      L    D
Sbjct: 11  DRYEEINGLLASPDISSDIKRMTTLSKEQSAIEPIVNKAKEYISVLNDIQDNKLLY---D 67

Query: 81  DCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +   + L+ ++L      E  +   +     D+ + ++E+ AGAGG E+  +   
Sbjct: 68  DPELGELAKEELKDLELRKPTIEEEIKVLMIPKDPNDNKNIFIELRAGAGGDEAGIFVGN 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L R Y R+AE + +K E +   + E  G K    L KG   Y  LK E G HR+ R+   
Sbjct: 128 LFRAYLRYAELKGWKVEIMNQSENEAGGYKEIVALFKGEQVYSRLKYESGTHRVQRVPAT 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ V P V D +E+EI   D +ID  RASG GGQ VNTTDSAVRITHIP
Sbjct: 188 ESQGRVHTSAITVAVMPEV-DDVEVEIDPGDLKIDVMRASGNGGQSVNTTDSAVRITHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIR 313
           +G+VV  Q ++SQHKNK +A  +L+A+LY++++  +E++ + G S K ++G G    +IR
Sbjct: 247 SGLVVTNQDQKSQHKNKDKAMKVLKARLYDIQM--QEKMDSEGASRKEQVGTGDRSGRIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + D R N+       V+ DG  D+ +   + 
Sbjct: 305 TYNY-PQGRISDHRINLTLYRLEAVMNDGVFDEIIDPLIT 343


>gi|302327519|gb|ADL26720.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 358

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 177/341 (51%), Gaps = 8/341 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +++   L ++  +P +  +      + ++ + ++ A+   KE    + D     + AL
Sbjct: 10  KLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDDLDE-YKAAL 68

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            + D  ++      +  I+ ++    +  Q   +     D  +A LE+  G GG ES  +
Sbjct: 69  GDSDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGTGGDESALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY  + +K  +K    ++ +G   G K   + I+G + YG LK E GVHR+ R+
Sbjct: 129 AGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ + P   + +++EI E+D  +DTYR+SGAGGQ++N TDSAVR+T
Sbjct: 189 PETETQGRVHTSAATVAILPEA-EEVDVEIREADIHMDTYRSSGAGGQYINKTDSAVRLT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQI 312
           HIPTGVVV CQ ERSQ +N+  A  MLR+K+ +  + K+E E A   ++         +I
Sbjct: 248 HIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKEEAANRKALVGTGDRSAKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           R+Y   P   V D R  +   +   V+ GDLD+ +      
Sbjct: 308 RTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMA 347


>gi|145631266|ref|ZP_01787039.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|145633057|ref|ZP_01788789.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145637033|ref|ZP_01792696.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145639267|ref|ZP_01794873.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145641183|ref|ZP_01796763.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae R3021]
 gi|148828361|ref|YP_001293114.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229844833|ref|ZP_04464971.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|229846242|ref|ZP_04466354.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|319897322|ref|YP_004135518.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
 gi|144983193|gb|EDJ90688.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|144986283|gb|EDJ92862.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145269687|gb|EDK09627.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145271570|gb|EDK11481.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145274020|gb|EDK13886.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 22.4-21]
 gi|148719603|gb|ABR00731.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229811246|gb|EEP46963.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|229812214|gb|EEP47905.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|317432827|emb|CBY81192.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
          Length = 248

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 151/247 (61%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|195973764|gb|ACG63447.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQEVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|195973770|gb|ACG63450.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 155/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|182435969|ref|YP_001823688.1| peptide chain release factor 1 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776593|ref|ZP_08235858.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
 gi|238689014|sp|B1W0B6|RF1_STRGG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|178464485|dbj|BAG19005.1| putative peptide chain release factor 1 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326656926|gb|EGE41772.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
          Length = 358

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 175/347 (50%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +   A+ L +    L   +S  +  +    D     E 
Sbjct: 5   VEELIGEHTGLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGEDIETAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES  +A 
Sbjct: 65  AA--DDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  +K E 
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARMKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPSTESQGRIHTSAAGVLVTPEA-EEVDVEIHANDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKT 304
           TDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+  +++  S   
Sbjct: 242 TDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A +
Sbjct: 302 TVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQACV 347


>gi|319945454|ref|ZP_08019714.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
 gi|319741240|gb|EFV93667.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 175/343 (51%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL  LN +     + +++   K L +E       +      +    D     ++
Sbjct: 9   LDRMQNRLEELNAQLASEDIGKDISLLKKLNQEHAETSEVLDTYALWKQAGADLEAARQM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             E D      E   + + R++   E  ++  L     D+ +A LE+ AG GG ES  +A
Sbjct: 69  REEPDMREFADEEIADAETRLQATQERIEYLLLPRDPDDARNAILEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R ++TE L   + E  G +   + + G   YG L+ E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAEHRGWQTEILSASESELGGYREVIVQVSGQQVYGRLRYESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V    + + +IEIS  D RID +RASGAGGQHVN T+SAVRITH
Sbjct: 189 VTESQGRIHTSACTVAVMAEAEPTGDIEISPDDLRIDVFRASGAGGQHVNKTESAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ +RSQH+N+ +A  +L  +L +    +RE  A      K+ +G G    +
Sbjct: 249 LPTGIVAECQDDRSQHRNRDKAMTVLLTRLRDAR--ERERAAETSAHRKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       ++DGDLD+   A +  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQTIIDGDLDELTDALMKAR 348


>gi|88596258|ref|ZP_01099495.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88191099|gb|EAQ95071.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 355

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 181/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLIKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|325914250|ref|ZP_08176600.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325539505|gb|EGD11151.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 361

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 177/342 (51%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++ + R   +L   E 
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRSLSRELSQLEPVAIALED-EARAKADLSAAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              + +   L E      + +L+    Q   LL      D  + +LEV AG GG E+  +
Sbjct: 68  MRNDPEMRELAEEEIAAAQARLDELDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+
Sbjct: 128 AGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RIT
Sbjct: 188 PATESQGRIHTSAATVAIIPEADDIEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G    
Sbjct: 248 HVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 306 RIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLL 346


>gi|300741300|ref|ZP_07071321.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|311113380|ref|YP_003984602.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
 gi|300380485|gb|EFJ77047.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|310944874|gb|ADP41168.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
          Length = 360

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 10/343 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + L  +  DP +  N  +A+ + R    L   ++   + +    D     E+A E
Sbjct: 8   LLDEHTELQEQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYKSLADDLEAAREMASE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D     E       ++   E  +   +     D  +  LEV AGAGG E+  +A  LL
Sbjct: 68  --DPDFAAEIPTLEAELEEAQERLRRLLIPRDPDDGRNVILEVKAGAGGDEAALFAGDLL 125

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRLVR 192
           RMY R+AE + +KTE +     +  G K A + IKG         +  +K E GVHR+ R
Sbjct: 126 RMYLRYAEHKGWKTEVISSTSTDVGGYKDAQIAIKGTSNEPAEGVWAHMKYEGGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + V+P VD+  EIEIS++D +ID YR+SG GGQ VNTTDSAVRI
Sbjct: 186 VPATESQGRIHTSAAGVLVFPEVDEPEEIEISQNDLKIDVYRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQ 311
           TH+PTG+VV  Q E+SQ +N+  A  +LRA+L   + ++ + E A    S    +    +
Sbjct: 246 THLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVRTMDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D RT  +  +   VLDGDLD  +++ + + 
Sbjct: 306 IRTYNF-PENRIADHRTGYKAYNLDAVLDGDLDPVVQSAIEMD 347


>gi|227873770|ref|ZP_03991999.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
 gi|227840386|gb|EEJ50787.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
          Length = 358

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 180/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +    +      P +  ++ + K L+ E+  L+         +         L L
Sbjct: 5   LEEVKKHYEEIMHNLTIPEVVSDISQYKKLILEQTSLEPIYKAYLAFRKAEQSEEEALSL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  IL+   + LQ+ K + E      Q   L   E D  +  +E+  GAGG E+ 
Sbjct: 65  LDNEKDKEILEMAKEELQQAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AEKR +KTE +  ++    G+K    ++ G  AY  LK E GVHR+ 
Sbjct: 125 LFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVDGHGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V + +++EI+ +D R++ +R+SGAGGQH+N T SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVMPEV-EDVQVEINPADVRMEVFRSSGAGGQHINKTSSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           + H PTG+V +CQ+ERSQ +N+ +A  +LRA+LYE+EL+K++ E A    S         
Sbjct: 244 LIHEPTGLVAECQEERSQVQNREKAMRLLRARLYEIELEKQQSENAAEKRSQLGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +   +   VL GDLD  +   +   +
Sbjct: 304 KIRTYNF-PQGRVTDHRIKLTLYNIDAVLSGDLDLLIDPLITEDQ 347


>gi|145635061|ref|ZP_01790767.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148826180|ref|YP_001290933.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
 gi|145267669|gb|EDK07667.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148716340|gb|ABQ98550.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
          Length = 248

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 150/247 (60%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGKHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
 gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
          Length = 356

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 176/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L T+  DP +  +   A+ L +    L       +E      D     EL
Sbjct: 5   IDDLLAEYAELGTRLADPSVHADADVARKLGKRYAELGPIAETYREYTSVSDDITAAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           + E  D +  +E     +R     E  Q   +     D  +  LE+  G GG ES  +A 
Sbjct: 65  SAE--DPAFGEEIPGLQERRTALEERLQKLLIPRDPMDEKNVILEIKGGEGGQESMLFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHR 189
            LLRMY R+AE++ +KTE LE  + +  G K   + +KG         +  LK E GVHR
Sbjct: 123 DLLRMYMRFAERQHWKTEILESTESDLGGYKDVQVAVKGRVNEAGEGVWARLKYEGGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V P   + +E+EI+ +D RID +R+SG GGQ VNTTDSA
Sbjct: 183 VQRVPVTESQGRIHTSAAGVLVLPEA-EDVEVEINANDLRIDVFRSSGPGGQSVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L  +  ++ +  A+    S+   +  
Sbjct: 242 VRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAVAQEEADREASDTRKSQIRTMDR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D R   +  +   VLDGDLD  ++A +
Sbjct: 302 SERIRTYNF-PENRISDHRVGYKSYNLDQVLDGDLDAVIQACV 343


>gi|317052432|ref|YP_004113548.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
 gi|316947516|gb|ADU66992.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
          Length = 355

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 179/340 (52%), Gaps = 11/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L+ +   P    +    +   RE   L   +   ++ +    +     E+
Sbjct: 5   LQDIEDRYELLSAELSHPGATADTQRLQQATRELSELREVVEAFQQFKTVRRELADNQEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     +Q ++ + +  +             D+ +  LE+ AG GG E+ 
Sbjct: 65  LTSEKDRELREMIQQEIQSLRHQEQQLEDTLTELLLPRDPNDTKNIILEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+A++R +K E L +++    G +    +I+G N Y  LK E G HR+ 
Sbjct: 125 LFATDLFRMYSRYADERGWKVEVLSVNETGNGGFREIISMIEGRNVYSRLKFESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + ++I+I+ +D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPQTESSGRIHTSAVTVAVLPEA-EEVDIDINPADLRIDVYRSSGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGV V CQ+ RSQHKNK +A ++LR++L +  +  ++  +   +  K ++G G  
Sbjct: 244 VTHIPTGVSVACQEGRSQHKNKEKALSILRSRLLDHAV--QQSDSQRSQDRKLQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +IR+Y   P   V D R N+       VL+GDLD+ + 
Sbjct: 302 SERIRTYNF-PQGRVTDHRVNLTLHRLEQVLEGDLDEVID 340


>gi|217963389|ref|YP_002349067.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
 gi|217332659|gb|ACK38453.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
          Length = 304

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 137/267 (51%), Positives = 179/267 (67%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +VV CQ ERSQ KN+ QA  ML+ KLY
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLY 267


>gi|315638047|ref|ZP_07893232.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
 gi|315481895|gb|EFU72514.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
          Length = 355

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 187/338 (55%), Gaps = 9/338 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++R   LNT   D  +  ++ +   L +E+++L+  +   K+  + L        L  + 
Sbjct: 10  LKRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALLNDP 69

Query: 80  DDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E   NL+  K+  E + +   L     D  + +LE+ AG GG E+  +   L+
Sbjct: 70  EFSELAKEELKNLEEAKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFVGDLV 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+A+ R +K E +   +G   G K   +L+KG  AY  LK E G HR+ RI   +S
Sbjct: 130 KAYARYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQRIPQTES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P V D IEI+I+ +D +ID  R+SG GGQ VNTTDSAVRITHIP+G
Sbjct: 190 QGRIHTSAITVAIMPEV-DDIEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPSG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G    +IR+Y
Sbjct: 249 LVVVNQDGKSQHKNKESAMKILKARLYEMQESER--LAKESEARKSQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
              P   + D R N+       +++G L D+ ++  +A
Sbjct: 307 NF-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIA 343


>gi|283956995|ref|ZP_06374467.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791496|gb|EFC30293.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 355

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 181/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+          E  +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKILEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 360

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 123/330 (37%), Positives = 188/330 (56%), Gaps = 7/330 (2%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALEEDDCSILQ 86
             DP + ++  + + + +E + L   ++   E +    ++ +   LL    ++D   + +
Sbjct: 23  MADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVNRQIEEVKQLLNSTPDDDLRELAE 82

Query: 87  ETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           E  ++L++ + ++E K +   L     D  +  LE+  GAGG E+  +A  L RMY R+A
Sbjct: 83  EELESLKKHREDLEKKIEIALLPKDPNDERNVILEIRQGAGGDEASLFAAELFRMYQRYA 142

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  +KTE L +H  E+ GIK    LIKG  AY  LK E GVHR+ R+   +S+ R HTS
Sbjct: 143 ERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHRVQRVPETESSGRIHTS 202

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P   + ++IEI   + RI+T RA GAGGQHVNTTDSAVRITHIPTG+VV CQ 
Sbjct: 203 TVTVAVLPEA-EEVDIEIKPEELRIETMRAGGAGGQHVNTTDSAVRITHIPTGMVVTCQD 261

Query: 266 ERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           ERSQ +NK +A  +LRA+L +  E  ++E+IA   +          +IR+Y   P   V 
Sbjct: 262 ERSQLQNKMKAMQILRARLKDYYERLEKEKIAKERKEQVGTGERSEKIRTYNF-PQNRVT 320

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           D R N      +D++DGDLD+ +   +A +
Sbjct: 321 DHRVNYTSYRINDIMDGDLDEIIDVLIAKE 350


>gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
 gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
          Length = 369

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 182/347 (52%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  LN       +  ++ +   L RE   +        + + R  D     E+
Sbjct: 9   LERYAQRLDELNFLLSREDIMGDMKQFLALSREHNEVTAIAGRYAQYRQRETDLSSAREM 68

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             E D   I QE     +  +    +  Q   L     D+ +A+LE+ AG GG ES  +A
Sbjct: 69  LAEPDMTDIAQEEITAAMADLVRLEDELQRLLLPKDPDDARNAFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA--------YGWLKGEQG 186
             LLRMYTR+A++R +KTE +     E  G K   L I G NA        YG L+ E G
Sbjct: 129 ADLLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAESPSGLGVYGELRFESG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS  ++ V P  D+   ++I+ ++ RIDT+RASGAGGQH+N T
Sbjct: 189 GHRVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRIDTFRASGAGGQHINKT 248

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+V +CQ +RSQH+NKA+A  +L A++ E E  +R   A    + +  I
Sbjct: 249 DSAVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKERSER--AAKDAATRRGLI 306

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G G    +IR+Y   P   + D R N+     S V++G LDD ++A 
Sbjct: 307 GSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLSQVMEGALDDVVQAL 352


>gi|330823524|ref|YP_004386827.1| peptide chain release factor 1 [Alicycliphilus denitrificans K601]
 gi|329308896|gb|AEB83311.1| Peptide chain release factor 1 [Alicycliphilus denitrificans K601]
          Length = 371

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 179/342 (52%), Gaps = 5/342 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRLS L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 20  LERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREADLEGAREM 79

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            LE+ D + + +        +L     + + +L      D  +A++E+ AG GG ES  +
Sbjct: 80  -LEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTGGDESALF 138

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+A  + +K E +  ++ E  G K   L I+G +AYG L+ E G HR+ R+
Sbjct: 139 AGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESGGHRVQRV 198

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ 
Sbjct: 199 PATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVV 258

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQI 312
           H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R    A + +          +I
Sbjct: 259 HLPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSERAAKEAALRKGLIGSGDRSDRI 318

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           R+Y   P   + D R N+       V++GDL + ++A    +
Sbjct: 319 RTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAR 359


>gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18]
 gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18]
          Length = 360

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 179/343 (52%), Gaps = 10/343 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + L  +  DP +  N  +A+ + R    L   ++   +      D     E+A  
Sbjct: 8   LLDEHADLQNQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYTSLKDDLEAAREMA-- 65

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D     E     + +++  E  +   +     D  +  LEV AGAGG E+  +A  LL
Sbjct: 66  DEDPDFAAEIPGLEEELEVAQEKLRRLLIPRDPDDGRNVILEVKAGAGGDEAALFAGDLL 125

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRLVR 192
           RMY R+AE + +KTE +     +  G K A + IKG         +  LK E GVHR+ R
Sbjct: 126 RMYMRYAEHKGWKTEIISSTSTDVGGYKDAQIAIKGSSNEPAEGVWAHLKYEGGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + V+P VD+  EIEI+++D +ID YR+SG GGQ VNTTDSAVRI
Sbjct: 186 VPATESQGRIHTSAAGVLVFPEVDEPEEIEINQNDLKIDVYRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQ 311
           TH+PTG+VV  Q E+SQ +N+  A  +LRA+L   + ++ + E A    S    +    +
Sbjct: 246 THLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVRTMDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D RT  +  +   VL+GDL+  +++ + + 
Sbjct: 306 IRTYNF-PENRIADHRTGYKAYNLDAVLNGDLEPVVQSAIEMD 347


>gi|30249865|ref|NP_841935.1| peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718]
 gi|46576779|sp|Q82TH4|RF1_NITEU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30180902|emb|CAD85824.1| prfA: peptide chain release factor 1 [Nitrosomonas europaea ATCC
           19718]
          Length = 359

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 181/347 (52%), Gaps = 8/347 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            G+ D       RL  L+       +  ++   + L RER  ++      +  Q    D 
Sbjct: 3   KGIIDQLTRLSMRLGELDKLLSTEKITADLDNYRKLSRERAEIEPVTELYRTYQQVEQDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGT 128
               E++ +       +   +  +R    +E +    LL     D  + +LE+ AG GG 
Sbjct: 63  ATAREMSSDPQFRDFAEAEIEADRRKLTNIETEILRQLLPKDPNDERNIFLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES  +A  L RMY+R+AE+  ++ E +  +  E  G K   + I G  AY  LK E G H
Sbjct: 123 ESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRIIGHGAYSRLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P  D+  +I ++ +D RIDT+RASGAGGQH+N TDS
Sbjct: 183 RVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDTFRASGAGGQHINKTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+V +CQ+ RSQHKNKAQA ++L A++ + ++  R + A    + K+ +G 
Sbjct: 243 AVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARILDKQV--RAQQAEQAATRKSLVGS 300

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   + D R N+       ++DG+LD+   A  A
Sbjct: 301 GERSERIRTYNF-PQGRITDHRINLTLYKIEQIIDGELDELCSALAA 346


>gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 356

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 5/335 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   ++T   DP++  ++     L +E+  L+  +   +   + L        L  +++
Sbjct: 11  KRYDEISTLLVDPNILNDIKRITELSKEQSDLEELVEKARAYLNNLQSIEENKALLDDKE 70

Query: 81  DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E     +   +++E   +   L     D  + YLE+ AG GG E+  +   L R
Sbjct: 71  LGDLAKEEIKETETQNVKLEAEIKVLLLPKDPNDDKNIYLELRAGTGGDEAGIFVGDLFR 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+A+ + +K E +   +    G K    L+KG  AY  LK E G HR+ R+   +S 
Sbjct: 131 AYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGGTHRVQRVPATESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P V D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITHIPTG+
Sbjct: 191 GRVHTSAITVAIMPEV-DDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQ 318
            V  Q E+SQHKNK +A  +L+A++YE EL+ + E+ A   +S         +IR+Y   
Sbjct: 250 SVSMQDEKSQHKNKDKAMKILKARIYEAELEAQMEQNAEARKSQVGSGDRSERIRTYNY- 308

Query: 319 PYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           P   + D R  +   S  +++  G+LD  +   +A
Sbjct: 309 PQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVA 343


>gi|58583231|ref|YP_202247.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625067|ref|YP_452439.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575465|ref|YP_001912394.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75434334|sp|Q5GWQ9|RF1_XANOR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361638|sp|Q2NZW2|RF1_XANOM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689539|sp|B2SQN5|RF1_XANOP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58427825|gb|AAW76862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369007|dbj|BAE70165.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519917|gb|ACD57862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 361

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 178/342 (52%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++ + R   +L   E 
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALED-EARAKADLSAAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              + +   L E      + +LE    Q  SLL      D  + +LEV AG GG E+  +
Sbjct: 68  MRTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+
Sbjct: 128 AGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RIT
Sbjct: 188 PATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    
Sbjct: 248 HVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTEHSK--AAAAQAQTRKLQVGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 306 RIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLL 346


>gi|237800110|ref|ZP_04588571.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|257487126|ref|ZP_05641167.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|320323152|gb|EFW79241.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329576|gb|EFW85565.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330867549|gb|EGH02258.1| peptide chain release factor 2 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330872776|gb|EGH06925.1| peptide chain release factor 2 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330878328|gb|EGH12477.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330894559|gb|EGH27220.1| peptide chain release factor 2 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330959166|gb|EGH59426.1| peptide chain release factor 2 [Pseudomonas syringae pv. maculicola
           str. ES4326]
 gi|330964102|gb|EGH64362.1| peptide chain release factor 2 [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|330985076|gb|EGH83179.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331009249|gb|EGH89305.1| peptide chain release factor 2 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331022966|gb|EGI03023.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 248

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 154/246 (62%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ S
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QKR   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D++
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEY 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 LIASLK 245


>gi|288801053|ref|ZP_06406509.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288331987|gb|EFC70469.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 373

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 122/359 (33%), Positives = 205/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    + +           +T+ P  W +V  A+  M++ + ++  +   KE+
Sbjct: 10  IQERADALHAYLNIEEKKVEFEEEQLRTQAPDFWDDVERAQEQMKKVKGIEKWLVGYKEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +   +E       E  +  ++    VE  +  ++L  + D  D  L+++
Sbjct: 70  RLLADELQLSFDFFHDEMVSE--SEVDETYKKALQAVEALELMNMLRQKEDPMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+R+Y RWAE    K     + +G+EAGIKS T+ I+ G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRLYMRWAESHGHKVTISNLQEGDEAGIKSVTMEIEGGEFAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 247

Query: 242 HVNTTDSAVRITHIPT--------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVETGVRLRYQYTDPDTGVEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + T    V++G +D+F+KA L 
Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMNGKIDEFIKAYLM 365


>gi|205355626|ref|ZP_03222396.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346403|gb|EDZ33036.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 355

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AGAGG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRSYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
 gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
          Length = 361

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 176/339 (51%), Gaps = 12/339 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R + +  +  DP++  N        +E   L   +   +   ++    L    L
Sbjct: 11  LEEVEARFNAVERELADPNIVANQENFMKRSKEHAELSQLVECFRSY-NKYEQELEQNRL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + +DD  +       +++ +  +   +       L     D  +  LE+ AG GG E+ 
Sbjct: 70  LMADDDEELAALAGVEVEQAETALVDLEQRMRLLLLPQDPRDEKNVVLEIRAGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE +++KTE L  H     G K    LI G  AY  LK E G HR+ 
Sbjct: 130 LFAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALITGRGAYSQLKYESGAHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   D +E++I   + RID +R+SG GGQHVNTTDSAVR
Sbjct: 190 RVPATESQGRVHTSAVTVAVLPEA-DEVEVDIKPEELRIDYFRSSGPGGQHVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNKA+A  +L A+L  LE  ++E+ A +  + ++++G G  
Sbjct: 249 ITHLPTGLVVSCQDEKSQHKNKAKALKVLAARL--LEKMEQEQQAALAANRRSQVGSGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
             +IR+Y   P   V D R  +      +VL G+L+  +
Sbjct: 307 SERIRTYNF-PQGRVTDHRIGLTIYKLEEVLVGELELII 344


>gi|258406203|ref|YP_003198945.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
 gi|257798430|gb|ACV69367.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
          Length = 356

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 181/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R + +  +     + Q+      L +    L   IS  +E ++ L       + 
Sbjct: 5   LDSIEERYAEIEQELSSSDVLQDQQRYAELAKAHADLGEIISVYREYKEVLTGIEE-NQD 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L + D  + +   + L  ++   E      Q   L     D  +  LE+ AG GG E+ 
Sbjct: 64  VLSDGDQELRELAKEELSALETRQEELHARLQKLLLPKDPMDDKNIILEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LLRMYTR+AE   +K E +  H     G+K     I G + Y  LK E GVHR+ 
Sbjct: 124 LFVADLLRMYTRYAETMHWKVELMNSHPTGSGGMKEVIASISGASVYSRLKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + +++EI  S+ RID +RASG GGQ VNTTDSAVR
Sbjct: 184 RVPSTESQGRIHTSAVTVAILPEA-EEVDVEIDPSELRIDYFRASGPGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+GVVV CQ E+SQHKNKA+A  +LR+++  L+ ++ E    +  S ++++G G  
Sbjct: 243 ITHIPSGVVVSCQDEKSQHKNKAKAMKVLRSRI--LKAKQEEAKKELDASRRSQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+   S  +VL G++D+ ++  +   +
Sbjct: 301 SERIRTYNF-PQGRITDHRINLTLYSLENVLAGNMDEVIEPLVQHDQ 346


>gi|237744127|ref|ZP_04574608.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|256027764|ref|ZP_05441598.1| peptide chain release factor 1 [Fusobacterium sp. D11]
 gi|289765720|ref|ZP_06525098.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
 gi|229431356|gb|EEO41568.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|289717275|gb|EFD81287.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
          Length = 357

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 185/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+ AGAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|325956455|ref|YP_004291867.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
 gi|325333020|gb|ADZ06928.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
          Length = 362

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+H  AGG E+ 
Sbjct: 68  IANESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIHGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDY--YESQNQAKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|312891182|ref|ZP_07750704.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
 gi|311296349|gb|EFQ73496.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
          Length = 286

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 129/267 (48%), Positives = 196/267 (73%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  +         E  +F+++LS E D   A L++ AGAGGTES DWA+ML+RMY  WA
Sbjct: 13  EEVQEQYNIALKAAEELEFKNMLSAEEDQLSAVLQITAGAGGTESCDWASMLMRMYMMWA 72

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +K  +K   ++  +G+ AG+K+ TL   G  +YG+LKGE GVHRLVR+SP+D+N++RHTS
Sbjct: 73  QKNGYKITEIDYQEGDVAGVKTVTLQFDGDFSYGYLKGENGVHRLVRVSPFDANAKRHTS 132

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S++VYP+VDD+I I+++ +D   +T+R+ GAGGQ+VN  ++AVR+ H P+G++++ Q+
Sbjct: 133 FASVYVYPLVDDTINIDVNPADIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIIIKNQE 192

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQ +NK  A  +L+++LYE E++KR EI++  E +K +I WG QIR+YVL PY++VKD
Sbjct: 193 SRSQLQNKENAIRLLKSQLYEAEMRKRMEISDAIEGNKKKIEWGSQIRNYVLHPYKLVKD 252

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT+ E ++   VLDG+LD+F+KA L 
Sbjct: 253 LRTDYETSNAQAVLDGELDEFLKAYLM 279


>gi|315038002|ref|YP_004031570.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|312276135|gb|ADQ58775.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|327183282|gb|AEA31729.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1118]
          Length = 362

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IANESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDY--YESQNQAKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
 gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
          Length = 357

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 121/338 (35%), Positives = 182/338 (53%), Gaps = 10/338 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R   LN   E+     +  +   L +ER  L+  +   +E +  L        L L
Sbjct: 7   AIESRFEELNRLLEENA--GDYQKVIELSKERADLEPIVEKAQEYRTVLKQIEEARTL-L 63

Query: 78  EEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           E  D  + +    +L+ ++   EV  K+ ++LL      D  +  +E+ AG GG E+  +
Sbjct: 64  ESGDEELRELAEADLETLEPRQEVLEKELKTLLIPKDPRDERNVIVEIRAGTGGEEAALF 123

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY+R+AEKR +  E +  ++    G K    ++KG  AY  LK E GVHR+ RI
Sbjct: 124 AGDLFRMYSRYAEKRGWSVEIISQNETGIGGYKEIIFMVKGKGAYSRLKYESGVHRVQRI 183

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S+ R HTS +++ V   V D ++I I +SD  I+ YR++GAGGQ+V    +AVRIT
Sbjct: 184 PVTESSGRIHTSTATVAVLAEV-DEVDINIPDSDLEIEVYRSAGAGGQNVQKNSTAVRIT 242

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTG+VV CQ ERSQ +NK +A ++LRAKLYE+E QKR++  +    S+   G    +I
Sbjct: 243 HLPTGIVVACQDERSQLQNKLRAMSILRAKLYEIEEQKRQQELDATRRSQVGTGERAEKI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  I   +   VLDG++D F+   
Sbjct: 303 RTYNF-PQSRVTDHRIGISSYNLPAVLDGEIDLFIDEL 339


>gi|332687009|ref|YP_004456783.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
 gi|332371018|dbj|BAK21974.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
          Length = 358

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 104/347 (29%), Positives = 166/347 (47%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +L   +   +  +  +       EL
Sbjct: 5   LQAIEDRYEELGELLSDPEIISDTNRFLKLSKEEANLRETVEVYRRYKQVIQGIKDTEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  +  +L+   + L  +K E E      +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LGESLESEMLEMAKEELSELKQEKEVLGDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E ++ +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGNLFSMYQKYAELQGWKIEVMDANITGIGGYKEVIMMITGENVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI++ + D R D Y ASGAGGQH+N T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIDLEDKDIRTDIYHASGAGGQHINKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LR ++Y+    ++E  +      K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKILRTRVYD--QLQQEAQSAYDADRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLQKLDQVLSGKLDEIIDALVLYDQ 347


>gi|325929457|ref|ZP_08190585.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
 gi|325540232|gb|EGD11846.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
          Length = 361

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 177/342 (51%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N    + L RE   L+     ++E + R   +L   E 
Sbjct: 9   LEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEE-EARAKADLATAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              + +   L E      + +LE    Q  SLL      D  + +LEV AG GG E+  +
Sbjct: 68  LRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+
Sbjct: 128 AGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RIT
Sbjct: 188 PATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    
Sbjct: 248 HVPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSK--AAAAEAQTRKLQVGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 306 RIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLL 346


>gi|218249952|ref|YP_002374604.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223889107|ref|ZP_03623696.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224533928|ref|ZP_03674513.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226322014|ref|ZP_03797539.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
 gi|218165140|gb|ACK75201.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223885356|gb|EEF56457.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224512931|gb|EEF83297.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226232604|gb|EEH31358.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
          Length = 282

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 144/283 (50%), Positives = 195/283 (68%), Gaps = 4/283 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + E+A  E D S L+        ++ + +     S    E D+N+A+L +H+GAGGTE+ 
Sbjct: 1   MCEIAENEKDTSGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEAC 57

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+
Sbjct: 58  DWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLI 116

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVR
Sbjct: 117 RISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVR 176

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI WG Q
Sbjct: 177 ITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQ 236

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 237 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279


>gi|146300064|ref|YP_001194655.1| peptide chain release factor 1 [Flavobacterium johnsoniae UW101]
 gi|189039972|sp|A5FHI8|RF1_FLAJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146154482|gb|ABQ05336.1| bacterial peptide chain release factor 1 (bRF-1) [Flavobacterium
           johnsoniae UW101]
          Length = 358

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      QR   ++     P +  +    K L +E + +   +   +E    L +   
Sbjct: 1   MLDRLQYVKQRFDEISDLIIQPDVISDQKRYKSLNQEYKGIKALVEKREEYIIVLANIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L   K  +    E  +F  +     D+ +  +E+ AG GG
Sbjct: 61  ANEIIADGSDAEMVEMAKMQLDEAKDRLPELEEEIKFMLIPKDPEDAKNVMVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E   ++T  +++++G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCETMGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  ++++  +D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEA-EEFDVQVDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEI 306
           SAVR+THIPTG+V QCQ E+SQHKNK +A  +LR++LYE+EL +K+EE A    S  +  
Sbjct: 240 SAVRLTHIPTGLVAQCQDEKSQHKNKDKALMVLRSRLYEMELAKKQEEDAKKRSSQVSSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y       V D R  +      ++++GD+   +   
Sbjct: 300 DRSAKIRTYNYA-QGRVTDHRVGLTLYDLGNIMNGDIQKIVSEL 342


>gi|260879267|ref|ZP_05891622.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
 gi|308089661|gb|EFO39356.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
          Length = 325

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 110/311 (35%), Positives = 169/311 (54%), Gaps = 10/311 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   + ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AKE-DDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+R
Sbjct: 188 RVPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A + ++ +  +G G  
Sbjct: 248 ITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDR 305

Query: 310 -RQIRSYVLQP 319
             +IR+Y    
Sbjct: 306 SDRIRTYNYPQ 316


>gi|62185243|ref|YP_220028.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
 gi|81312600|sp|Q5L5L4|RF1_CHLAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62148310|emb|CAH64077.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
          Length = 361

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 178/339 (52%), Gaps = 7/339 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++RL  +  +  +P ++ N  E  +L +E   L    +    +  +        +   +E
Sbjct: 9   LKRLEEVEVEISNPEIFNNPKEYSLLSKEHARLSELKNTYDRVMAQEKVLSDDKQALAQE 68

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
            D  ++    + +Q  K EVE   K  E+LL      D  +  +E+ AG GG E+  +  
Sbjct: 69  KDPEMIAMLEEGIQSGKAEVEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
             +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+  
Sbjct: 129 DCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
            ++  R HTS  ++ V P   +D  E+ I E D +IDT+RASGAGGQHVN TDSAVRITH
Sbjct: 189 TETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S++   G    +IR
Sbjct: 249 LPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEIQRRHKEASAMRSAQVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y       V D R  +   S   V++GDLD    A ++
Sbjct: 309 TYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDTITSALVS 346


>gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
 gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
          Length = 357

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 126/346 (36%), Positives = 179/346 (51%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + L       P    +      L RE   L+  +  I+ +     D      
Sbjct: 7   LDTLLDRFAELEHMMSANP----DPGAYVKLSREYAGLEPLVGKIRALIKAEQDLAGAKA 62

Query: 75  LALE-EDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  +   D  + +        ++  VE      +   L   EADSNDA LEV AG GG E
Sbjct: 63  LLQDPSSDAEMRELAEMERDELEERVEELAQDVRIGLLPKDEADSNDAILEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE + +K E L   +GE  G K     + G N +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVIASVSGENVFAKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I++ ESD RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLPQA-EDVDIDVQESDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV  Q ERSQHKNKA+A  +LRA++Y+ E       +   E+ + ++G G
Sbjct: 242 VRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYDEER--ERAASERTEARRLQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   V D R  +       +L G+ L + ++  +
Sbjct: 300 DRSERIRTYNY-PQGRVTDHRIGLTLYKLEQILSGEALGEVIEPLI 344


>gi|326318376|ref|YP_004236048.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375212|gb|ADX47481.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 360

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 110/337 (32%), Positives = 173/337 (51%), Gaps = 3/337 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 9   LERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQIAGRYARYRQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     +   +++E +    LL  + D + +A+LE+ AG GG ES  +A
Sbjct: 69  LDDPDMADMAREEISAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A    +K E L   D E  G K   L ++G   YG L+ E G HR+ R+ 
Sbjct: 129 GDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIR 313
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R    A + +          +IR
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLVGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+       +++GDL + + A 
Sbjct: 309 TYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLDAL 344


>gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121]
 gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121]
          Length = 363

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 182/343 (53%), Gaps = 7/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              +N   R   L     D  +  N    +   +E   L+  +   +E Q+   +NL   
Sbjct: 7   LKLENLADRYEELAALLSDAEIIMNQDLFRAYSKEYAELEPVVKCFEEFQEN-DENLEEA 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTE 129
           +L + + D  I +   + ++  ++  E    +           D  + ++EV AG GG E
Sbjct: 66  QLMMTDSDPDIKEMGVEEMKASQIRKEELLLDLQKLLLPKDPNDGRNVFVEVRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY+R+AE +++K E +  ++GE  G K     I G  AY  LK E GVHR
Sbjct: 126 ASIFAGDLFRMYSRYAETQRWKVELISCNEGEHGGYKEVIARIVGEGAYSLLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ + P +D+   IEI+++D R+DT+RASGAGGQHVN TDSA
Sbjct: 186 VQRVPATESQGRIHTSACTVAIMPEMDEQDAIEINKADLRVDTFRASGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           +R+THIPTGVVV+CQ ERSQHKN+A+A  +L ++L   E +K     +    S    G  
Sbjct: 246 IRLTHIPTGVVVECQDERSQHKNRAKAMALLASRLQAAEEEKHAAEQSETRKSLVGSGDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+      +++ GDLD+ ++  +
Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYKLDEIITGDLDNLVQPLI 347


>gi|326790732|ref|YP_004308553.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
 gi|326541496|gb|ADZ83355.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
          Length = 357

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 172/349 (49%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD     V +   +  +   P +  +    + LM+E   L   +   +E +  L     
Sbjct: 1   MFDQLQELVDKYHIIGDQISQPEVIADQERWQKLMKEHSDLKEIVEKYEEYKATLEAIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  +  D    +   + L   K  VE  +       L     D  +  +E+  GAGG
Sbjct: 61  ALMMLDDNLDDDFRELVKEELAENKKRVEPLENEIKLLLLPKDPNDDKNVIMEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +AE  ++KTE + +++    G K    ++KG  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYCYYAESHRWKTELMSLNENGIGGFKEVIFMVKGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P   + +++++  +D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTVTVAVMPEA-EELDVQLDMNDVRIDVCRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR  H+PTG++V CQ E+SQ KNK +A  +LR +L++LE  K   E+A   +S     
Sbjct: 240 SAVRALHVPTGLMVYCQDEKSQLKNKEKALKILRTRLFDLEQAKAHAEMAAEKKSLVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       VLDGDL++ +     + +
Sbjct: 300 DRSERIRTYNF-PQGRVTDHRVGLTLHKLEQVLDGDLEEIISTLTTVDQ 347


>gi|260494288|ref|ZP_05814419.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
 gi|260198434|gb|EEW95950.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
          Length = 357

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 185/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+ AGAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|225010612|ref|ZP_03701082.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
 gi|225005165|gb|EEG43117.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
          Length = 358

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 103/337 (30%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P + Q+      L +E + L + +   +       +     E+  +
Sbjct: 8   VKQRFDEVSDLIIQPDIIQDQKRYVQLNKEYKDLKSLMDKRELYISFTNNIEESQEIIDD 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +++     L   K  +    E  +F  +     D+ +  +E+ AG GG E+  +A
Sbjct: 68  GSDAEMVEMAKMQLDEAKAALPALEEEIKFLLIPKEPEDAKNVVVEIRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E R +KT  +++ +G   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYTKYCESRGWKTNVIDLSEGTSGGYKEIQFEVNGEDVYGTLKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   +  +++I   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVLPEA-EEFDVQIDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++E      +S+   G    +IR
Sbjct: 247 LPTGLVAQCQDQKSQHKNKDKAFVVLRSRLYDMELAKKQEADAAKRNSQVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   V D R  +      ++++GD+   +   
Sbjct: 307 TYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILSEL 342


>gi|283953774|ref|ZP_06371305.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283794815|gb|EFC33553.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 355

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 183/345 (53%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+   +  +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSNSDILSDISKMTTLSKEQKNLEPIVLKAKEYLKTLENIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSMGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|239982315|ref|ZP_04704839.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291454159|ref|ZP_06593549.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357108|gb|EFE84010.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 358

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 177/348 (50%), Gaps = 17/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 5   VEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A ++ D          L+  + E+ E  +   +    +D  D  LE+ AGAGG ES  +A
Sbjct: 65  AADDPD---FAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGE 184
             LLRMY R+AE+  +KTE ++  + E  G K   + +K          G   +  LK E
Sbjct: 122 GDLLRMYLRYAERVGWKTELIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARLKYE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + I++EI+++D RID YR+SG GGQ VN
Sbjct: 182 GGVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEIDVEINQNDLRIDVYRSSGPGGQSVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303
           TTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+ 
Sbjct: 241 TTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRSQV 300

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A +
Sbjct: 301 RTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGELDAVIQACV 347


>gi|86140561|ref|ZP_01059120.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
 gi|85832503|gb|EAQ50952.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
          Length = 360

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 101/337 (29%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLEL 75
             QR   ++     P +  +      L +E + L   +   +       R+ +   ++  
Sbjct: 10  IKQRFDEVSDLIIQPDIISDQKRYVELNKEYKDLRALMDERENYIKHTQRIEEAEEIIAD 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +   +  +     +E K +F  +     D+ +A +E+ AG GG E+  +A
Sbjct: 70  GSDPEMTEMAKLQLEEAKEAMPALEEKIRFMLVPKDPEDAKNAVMEIRAGTGGDEASIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++ E + ++T  ++  +G   G K   + + G + YG L+ E GVHR+ R+ 
Sbjct: 130 GDLYRMYMKYCESKGWRTSTIDYSEGTSGGYKEIQVEVTGEDVYGTLRFEAGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V+P   +  ++EI   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 190 QTETQGRVHTSAATVMVFPEA-EEFDVEIDPKDVRIDYFCSSGPGGQSVNTTYSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E       S    G    +IR
Sbjct: 249 EPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRGSMVTSGDRSAKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   V D R N+     ++++DGD+   +   
Sbjct: 309 TYNY-PQGRVTDHRINLTLYDLANIIDGDIQKIIDEL 344


>gi|238855957|ref|ZP_04646243.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|260664674|ref|ZP_05865526.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|282934364|ref|ZP_06339631.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|313471876|ref|ZP_07812368.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|238831430|gb|EEQ23781.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|239529209|gb|EEQ68210.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|260561739|gb|EEX27711.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|281301574|gb|EFA93851.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
          Length = 362

 Score =  284 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 97/341 (28%), Positives = 168/341 (49%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +     DP +  +      + +E   +   +   ++ Q+         E+
Sbjct: 8   LEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   + E     L     D  D  +E+   AGG E+ 
Sbjct: 68  IESESDADLVEMAKEENSDLEKEVADLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    + +   +    +    G    
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQASYDEKRKNAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G+LD+ + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346


>gi|166710803|ref|ZP_02242010.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 361

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 177/342 (51%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++ + R   +L   E 
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALED-EARAKADLSAAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              + +   L E      + +LE    Q  SLL      D  + +LEV AG GG E+  +
Sbjct: 68  MRTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+
Sbjct: 128 AGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ +    DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RIT
Sbjct: 188 PATESQGRIHTSAATVAIIAEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    
Sbjct: 248 HVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSK--AAAAQAQTRKLQVGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 306 RIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLL 346


>gi|206895451|ref|YP_002247173.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738068|gb|ACI17146.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 360

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 180/343 (52%), Gaps = 7/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L    E+P +  +  +   LMRE+  LD  I  I + +  + D      +  
Sbjct: 9   AMEERYESLVRDLENPEIASDPEQLMKLMREKSQLDPIIEKIADYRKLIRDIESAKAILE 68

Query: 78  EEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           E  +  + +   + L+ ++  +  + K+ + LL      D     +E+ AG GG E+  +
Sbjct: 69  EPGEDELKELAEEELRNLEDILPQKEKELKLLLVEPDPMDEKPVIVEIRAGVGGEEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+AE++ +K E ++ +  +  G K     ++G   Y  LK E GVHR+ R+
Sbjct: 129 AGDLFRMYTRYAERKGWKVELVDSNPTDLGGFKEVVFSVEGDRVYSRLKYESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S+ R HTS +++ V P V D +EIEI+E D  IDT+RA G GGQ+V   ++AVRI 
Sbjct: 189 PETESSGRIHTSTATVAVLPEV-DEVEIEINEEDLEIDTFRAGGHGGQNVQKNETAVRIK 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGWGRQI 312
           H PTG+VV CQ ERSQ +NK +A  +LRAKLYE +L++R++  +    S       G +I
Sbjct: 248 HKPTGIVVTCQDERSQLQNKMKALKVLRAKLYERQLEERQKSMSSFRRSLIGSAERGEKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y       V D R N         LDGDLD+ + A     +
Sbjct: 308 RTYNFM-QNRVTDHRINYTIYYLDRFLDGDLDEMIDALETADR 349


>gi|297184082|gb|ADI20201.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 360

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/339 (32%), Positives = 180/339 (53%), Gaps = 7/339 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLILLELAL 77
           QR + +N     P +  +      L RE ++L   +       E+  R+ +   +L+   
Sbjct: 12  QRYNEVNDLIIQPDVISDSKRYVQLNREYKNLKPLVEVRSQYLELSSRIEEAKGVLKEEK 71

Query: 78  EEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + D   + +   D L+   +   E  +   L     D  +A +E+  GAGG E   +A  
Sbjct: 72  DADFREMAKMELDELEPTFEALEEEVKLLLLPKDPEDDKNALVEIRQGAGGDEGAIFAGD 131

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R+ E R +K   L +++G   G K  +  + G + YG LK E GVHR+ R+   
Sbjct: 132 LFRMYQRYCEGRGWKVAVLTMNEGSSGGFKEVSFEVNGESVYGILKYESGVHRVQRVPAT 191

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +S+ V P   + +++++   D + DTYR+ GAGGQHVN T+SAVR+TH+P
Sbjct: 192 ESQGRVHTSAASVVVLPEA-EEVDVDLDMKDVKKDTYRSQGAGGQHVNKTESAVRLTHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIRSY 315
           TG+VV+CQ  RSQHKN  QA  +LR++++++E  +K+EE A   ++  +      +IR+Y
Sbjct: 251 TGIVVECQDGRSQHKNYEQALKVLRSRMFDMEFKKKQEEQAAQRKTMVSTGDRSAKIRTY 310

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              P   V D R  +   + +DV++GD+  F+      +
Sbjct: 311 NY-PQGRVTDHRIGLTSYNLNDVVNGDIQKFIDELHMAE 348


>gi|313681233|ref|YP_004058971.1| bacterial peptide chain release factor 1 (brf-1) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154093|gb|ADR32771.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 355

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/339 (32%), Positives = 177/339 (52%), Gaps = 15/339 (4%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R + L      P +  ++     L +E+  +   ++   E +  L D      LA    D
Sbjct: 12  RYNELTELLSSPDIGNDIKRMTELSKEQSSIQAIVNKATEYKKLLEDIEENKSLAF---D 68

Query: 82  CSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANML 137
             + +   + L+ ++  VE   ++ + LL  +   D  + Y+E+ AG GG E+  +   L
Sbjct: 69  AELGELAKEELRTLEPMVEPLEEEIKKLLIPADPNDKRNIYIELRAGTGGDEAAIFVGDL 128

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
              Y R+A+ + +K E +     +  G K    LIKG   Y  LK E G HR+ R+   +
Sbjct: 129 FNAYVRYADVKGWKIELMSSSPSDAGGYKEIIALIKGEQVYSRLKYEAGTHRVQRVPATE 188

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V P V D +E+ I+E+D +ID  R+SG+GGQ VNTTDSAVRITH+PT
Sbjct: 189 SQGRVHTSAITVAVMPEV-DDVEVTINENDLKIDVMRSSGSGGQSVNTTDSAVRITHLPT 247

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRS 314
           G+VV  Q E+SQHKNK +A  +L+A++YE+++   E         K ++G G    +IR+
Sbjct: 248 GIVVTNQDEKSQHKNKDKAMKILKARIYEMQM--EEAKVKEMSERKEQVGTGDRSGRIRT 305

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           Y   P   + D R N+      +++ G L DD ++  +A
Sbjct: 306 YNY-PQNRISDHRINLTLYRLDEIMQGGLMDDIIEPLIA 343


>gi|227892680|ref|ZP_04010485.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
 gi|227865551|gb|EEJ72972.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
          Length = 362

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  +++   +    I+ E+    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISGDSDPDLVEMAKEENSEIEKEIPKLEEQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDY--YESQNQAKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|289675203|ref|ZP_06496093.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           FF5]
 gi|302185552|ref|ZP_07262225.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           642]
 gi|330896019|gb|EGH28242.1| peptide chain release factor 2 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330936871|gb|EGH41012.1| peptide chain release factor 2 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330968992|gb|EGH69058.1| peptide chain release factor 2 [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330975436|gb|EGH75502.1| peptide chain release factor 2 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 248

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 152/246 (61%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK
Sbjct: 1   MFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ +
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QKR   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D++
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEY 239

Query: 347 MKATLA 352
           + A+L 
Sbjct: 240 LIASLK 245


>gi|126663551|ref|ZP_01734548.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
 gi|126624499|gb|EAZ95190.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
          Length = 357

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 172/344 (50%), Gaps = 8/344 (2%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      QR   ++     P +  +      L +E + L   +   +E      +   
Sbjct: 1   MLDRLQYVKQRFDEISDLIIQPDVIADQKRYVQLNKEYKDLKGLVEKREEYIALDGNIKE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L   K  +    E  +F  +     D+ +  +E+ AG GG
Sbjct: 61  ANEIIADGSDAEMVEMAKMQLDEAKDRLPQLEEEIKFMLIPKDPEDAKNVMVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E R ++T  ++I +G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCEARGWRTSVVDISEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  +++I  +D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEA-EEFDVQIDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEI 306
           SAVR+THIPTG+V QCQ ++SQHKNK +A ++LR++LYE EL  K+ E A    S  +  
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKALDVLRSRLYEKELAIKQAEDATKRSSQVSSG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y       V D R  ++      V++G +  F+   
Sbjct: 300 DRSAKIRTYNYS-QGRVTDHRIGLDVFDMDGVMNGKIQKFVDEL 342


>gi|78046531|ref|YP_362706.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|119361637|sp|Q3BX07|RF1_XANC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78034961|emb|CAJ22606.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 361

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 177/342 (51%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N    + L RE   L+     ++E + R   +L   E 
Sbjct: 9   LEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAMALEE-EARAKADLATAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              + +   L E      + +LE    Q  SLL      D  + +LEV AG GG E+  +
Sbjct: 68  LRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+
Sbjct: 128 AGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RIT
Sbjct: 188 PATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    
Sbjct: 248 HVPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSK--AAAAEAQTRKLQVGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 306 RIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLL 346


>gi|225552175|ref|ZP_03773115.1| peptide chain release factor 2 [Borrelia sp. SV1]
 gi|225371173|gb|EEH00603.1| peptide chain release factor 2 [Borrelia sp. SV1]
          Length = 282

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 144/283 (50%), Positives = 196/283 (69%), Gaps = 4/283 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + E+A  E D S L+        ++ + +     S    E D+N+A+L +H+GAGGTE+ 
Sbjct: 1   MCEIAENEKDTSGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEAC 57

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+
Sbjct: 58  DWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLI 116

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D++ +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVR
Sbjct: 117 RISPFDADKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVR 176

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI WG Q
Sbjct: 177 ITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQ 236

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 237 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279


>gi|114768932|ref|ZP_01446558.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
 gi|114549849|gb|EAU52730.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
          Length = 351

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 184/347 (53%), Gaps = 18/347 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R  +L  K  D      +     L +E   L   +  I+  +  L D     E+
Sbjct: 7   LEQICARFDYLEAKMADGSAVDEIA---KLSKEYSDLKPVVDQIENYKATLLDISEAEEM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L   D  +     + L  +K ++   + + L       EAD   A +E+ AG GG E+ 
Sbjct: 64  LL---DPELKVLAEEELPNLKEKLPILEHKLLLSLLPKDEADDKPAIIEIRAGTGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+ E + +K E +E ++ E  G K A + +KG   +  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYNRFCEDQGWKFEIVEGNETELGGYKEAIINVKGVGVFARLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   ++I++EI  +D R+DTYR+SGAGGQHVNTTDSAVR
Sbjct: 181 RVPTTESGGRVHTSAATVAIMPEA-ENIDLEIPTTDIRLDTYRSSGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++V    E+SQH+N+  A N+LR +LY+L+   ++       + K ++G G  
Sbjct: 240 ITHLPTGLIVTSS-EKSQHRNREIAMNVLRTRLYDLQR--QQAADERAATRKDQVGSGDR 296

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       V+ GDL++F+ A  A  +
Sbjct: 297 SERIRTYNF-PQGRVSDHRINLTLYKLDQVMQGDLNEFIDALTADDQ 342


>gi|225624841|gb|ACN96555.1| PrfB [Francisella noatunensis subsp. orientalis]
          Length = 294

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 153/296 (51%), Positives = 205/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELL--ELAEEDESLIQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ +
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQ 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGW + E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|88810851|ref|ZP_01126108.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
 gi|88792481|gb|EAR23591.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
          Length = 362

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 180/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            +   +R   +     DP +     +   L +E   L   +   S  +E++  L     L
Sbjct: 9   LEQLGERYEEIEALLADPTVIGEQKQFTALSQEYARLHPVVQALSKYQEMEQVLTSTRAL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGT 128
                E+ D  I     D ++  +L++E      Q+  L     D    +LE+ AG GG 
Sbjct: 69  ----SEDPDPEIRALAKDEIRAAQLQLEELGQQLQWLMLPQDPDDEKGIFLEIRAGTGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE+R+++ E +    GE  G K     ++G   Y  LK E G H
Sbjct: 125 EAALFAGDLFRMYARYAERRRWRLEIINEAPGEHGGYKEIISRVEGAGVYSRLKFESGAH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P  +   EIE + ++ R+DT+RASGAGGQHVN TDS
Sbjct: 185 RVQRVPTTESQGRIHTSACTVAVLPEPEQIEEIETATAELRVDTFRASGAGGQHVNKTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           A+RITH+PTG+VV+CQ ERSQHKN+A+A  +L+AKL   E +++++  +    S    G 
Sbjct: 245 AIRITHLPTGLVVECQDERSQHKNRAKAMGLLQAKLTARERERQQQEQSATRRSLVGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V + R  +      ++L+GDLD  +   ++  +
Sbjct: 305 RSERIRTYNF-PQSRVTEHRVGLTLYKLDEILEGDLDPIIDPLISSHR 351


>gi|300088066|ref|YP_003758588.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527799|gb|ADJ26267.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 356

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 180/349 (51%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   +     DP +  ++     L +ER  ++  I   +  +        
Sbjct: 1   MLDKLEIIERRYLEIEQAIADPSVATDITLLTRLAKERASMEALIGMYRRYKRNEQSLTE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   + ++R+K E E      +   L        +  +E+ AG GG
Sbjct: 61  AEQMLETETDEEMRELAKEEVKRLKQEQEELYEQLKIALLPKDPNAERNIIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E++ +A  L RMYTR+AE + +K E +++ +      K A   I G + Y  LK E GV
Sbjct: 121 DEAKLFAGDLFRMYTRYAELKGWKVEIIDLTEQSGGTFKEAVFEIDGEDVYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V PV  + IE++I   D RID Y + GAGGQ+VN   
Sbjct: 181 HRVQRVPVTEASGRIHTSTATVAVMPVA-EDIEVDIKPEDLRIDIYHSGGAGGQNVNKVA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           +AVR+TH+P+G+VV CQ+ERSQ KN+ +A ++L+A+L  +E +K+ +E+ +   +     
Sbjct: 240 TAVRMTHLPSGLVVACQEERSQLKNRQKAMSVLKARLLAMEQEKQDKEMTDNRRAQVGSA 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R  +   +   +++G LDD + A    ++
Sbjct: 300 DRSEKIRTYNY-PQDRLTDHRIGLSVHNLPKIMEGYLDDIIDALATDEQ 347


>gi|224477106|ref|YP_002634712.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254790897|sp|B9DMD1|RF1_STACT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222421713|emb|CAL28527.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 358

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVSDSNKLREYSKEQSDLQKTVDVYRQYKQNKEDIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           ++E+  E  D   +     ++  +K  +    E  +   +     D  +  +E+ A AGG
Sbjct: 61  IVEMLSETSDKEEVDMLKADMNELKDTLPGLEEELKMLLIPKDPNDDKNVVVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR++E   +KT  +E++D +  G K  +  I G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLYRMYTRFSEGLGYKTGVIEMNDSDHGGFKEISFTINGQGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++I ++D +I+TYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEA-EDVEVDIKDADLKIETYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG ++    E+SQ +N+ +A  +L+A++Y+++L  +EE        K+ +G
Sbjct: 240 SAVRITHLPTG-IIATSSEKSQIQNREKALKVLKARVYDMKL--QEEQEKYDSERKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALTMSEQ 346


>gi|294851112|ref|ZP_06791785.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
 gi|294819701|gb|EFG36700.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
          Length = 377

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 184/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           + +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  SDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 322 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 363


>gi|72162818|ref|YP_290475.1| peptide chain release factor 1 [Thermobifida fusca YX]
 gi|119361632|sp|Q47M70|RF1_THEFY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71916550|gb|AAZ56452.1| bacterial peptide chain release factor 1 (bRF-1) [Thermobifida
           fusca YX]
          Length = 355

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 176/346 (50%), Gaps = 12/346 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              D+ +     L  +  DP +  +  +A+ L +    L   ++  +E+     D     
Sbjct: 1   MKLDDLLGEYYELEQQLADPAVHADQAQARTLAKRYSQLTPIVATYRELNRVESDIETAQ 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA E  D S   E      + +  V+  +   +     D  D  LEV AG GG ES  +
Sbjct: 61  ELAAE--DPSFADEAKQLAAQREELVQRLRTLLIPRDPNDDKDVILEVKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQG 186
           A+ L+RMY R+AE++ +KTE +     +  G K  T+ IK       G   +  LK E G
Sbjct: 119 ASDLVRMYLRYAERQGWKTEIISATHSDLGGYKDITIAIKNRGTVEPGQGVWHRLKFEGG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS   + V P   + IE+EI+ESD RID YR+SG GGQ VNTT
Sbjct: 179 VHRVQRVPVTESQGRIHTSAVGVLVLPEA-EEIEVEINESDLRIDVYRSSGPGGQSVNTT 237

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305
           DSAVRITH+PTG+VV CQ E+SQ +NK QA  +LRA+L        E  A     S+   
Sbjct: 238 DSAVRITHLPTGIVVSCQNEKSQLQNKEQALRVLRARLLAEAQAAAEAEAAAERRSQVRT 297

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +    ++R+Y   P   + D R   +  +   VLDG+LD  ++A +
Sbjct: 298 VDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGELDGVIQALV 342


>gi|69249626|ref|ZP_00605024.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257880056|ref|ZP_05659709.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257882292|ref|ZP_05661945.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257885488|ref|ZP_05665141.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257891147|ref|ZP_05670800.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257893961|ref|ZP_05673614.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|258614612|ref|ZP_05712382.1| peptide chain release factor 1 [Enterococcus faecium DO]
 gi|260560331|ref|ZP_05832507.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|261208268|ref|ZP_05922941.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289565643|ref|ZP_06446089.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|293553327|ref|ZP_06673963.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|293563060|ref|ZP_06677526.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|293567649|ref|ZP_06678992.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|294615325|ref|ZP_06695200.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|294617194|ref|ZP_06696846.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|294623635|ref|ZP_06702473.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|314937739|ref|ZP_07845061.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|314942363|ref|ZP_07849210.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|314947687|ref|ZP_07851096.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
 gi|314952118|ref|ZP_07855137.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|314992371|ref|ZP_07857803.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|314997442|ref|ZP_07862389.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|68194105|gb|EAN08645.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257814284|gb|EEV43042.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257817950|gb|EEV45278.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257821344|gb|EEV48474.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257827507|gb|EEV54133.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257830340|gb|EEV56947.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|260073676|gb|EEW62002.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|260077525|gb|EEW65243.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289162611|gb|EFD10465.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|291589584|gb|EFF21389.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|291591828|gb|EFF23462.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|291596539|gb|EFF27780.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|291596961|gb|EFF28174.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|291602551|gb|EFF32767.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|291604974|gb|EFF34442.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|313588451|gb|EFR67296.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|313593096|gb|EFR71941.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|313595737|gb|EFR74582.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|313598876|gb|EFR77721.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|313642877|gb|EFS07457.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|313645928|gb|EFS10508.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
          Length = 357

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    +   +  ++ +       EL
Sbjct: 5   LQAIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTEEL 64

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   + L    +  ++  E  +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LGEKLDDEMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +KTE +E +     G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGDNVYSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I + D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIDIEDKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQIKNREKAMKILRARVYD--KIQQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQ 347


>gi|319893069|ref|YP_004149944.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162765|gb|ADV06308.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 358

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 182/351 (51%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +    +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +  E DD   ++   +    +K EV    E  +   +     D  D  +E+   AGG
Sbjct: 61  IELMLAETDDADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE  +FK E +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHIPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQ 346


>gi|332994017|gb|AEF04072.1| protein chain release factor B, RF-2 [Alteromonas sp. SN2]
          Length = 248

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 157/246 (63%), Positives = 187/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D+ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ DG+ AGIK
Sbjct: 1   MFSQPNDANDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP VDD I+I+I  S
Sbjct: 61  SATLRIAGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEVDDDIDIDIDPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F
Sbjct: 181 YELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGGLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|302384870|ref|YP_003820692.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
 gi|302195498|gb|ADL03069.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
          Length = 358

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 186/349 (53%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  D+ +     L  +  +P + ++    + LM+E+  L + +      K+ +  + D
Sbjct: 1   MFDKLDDILIHYEELMQELNNPSVTEDQNRFRKLMKEQADLADLVETYTQYKKAKQTVED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGG 127
           +L LLE   +E+   + +E     ++    +E   +   L     D  +  LE+ AGAGG
Sbjct: 61  SLALLEEESDEEMREMAKEELSEAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY  +AE   +K E + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFASELYRMYVNYAEGHHWKVELISVNENGIGGFKEVVAMITGKGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   +  ++ I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEA-EEFDVVIEDKDVRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEI 306
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+   A    S     
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQNSEAEERRSQIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +++GD+ + + + +A  +
Sbjct: 300 DRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDSLIAADQ 347


>gi|115375817|ref|ZP_01463069.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|310822927|ref|YP_003955285.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|115367205|gb|EAU66188.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|309395999|gb|ADO73458.1| Peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
          Length = 366

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 179/340 (52%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     +P +  +  + + + +ER  L+  +   +  +  L D    +E 
Sbjct: 5   LEEVERRFERLTADLSNPDVLADSAKLQKVSKERAALEKLVETFRTYRKVLGDLAE-VEA 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L+  D        + L  +K + E  + E     L     D  D  LE+ AGAGG E+ 
Sbjct: 64  WLDGGDADEKAYAREALPGLKQQREEFEQELKILLLPKDPNDEKDVILEIRAGAGGDEAG 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  +++MY R+A +R +K + +++  G   G+K  T+ + G   +  +K E GVHR+ 
Sbjct: 124 LFAEEVMQMYLRYATRRGWKADIVDMSPGSVGGVKDVTITLSGAAVFSNMKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + ++++I+ +D  +   R++G+GGQ VNTTDSAVR
Sbjct: 184 RVPATETQGRIHTSTITVSVMPEA-EDVDVQINPADIEMQVMRSTGSGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           + H P+G+VV+CQQE+SQ KN+AQA  MLRAKLYE+E ++ R E  ++            
Sbjct: 243 LIHKPSGIVVKCQQEKSQTKNRAQAMRMLRAKLYEIEQERIRSERDSMRRGQVGTGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R ++   +   ++ G +DD + A 
Sbjct: 303 KIRTYNF-PQDRLTDHRISLTVHNLPGIMAGGIDDVITAC 341


>gi|327481907|gb|AEA85217.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166]
          Length = 360

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 179/343 (52%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   +++     D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQNRFRAYSREYAEVEPVIVAYRQLCKVQQDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + +   K ++E  +   + +L      D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E L   +GE  G K     ++G N Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+   +EI+ +D RIDTYR+SGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDTYRSSGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV+CQ+ERSQHKN+A+A   L AKL + +         I E+ K  +G G  
Sbjct: 248 ITHLPTGIVVECQEERSQHKNRAKALAWLAAKLQDRQ--DAAAHKEISETRKLLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R N+   S ++V+ G ++  ++  L
Sbjct: 306 SERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLL 347


>gi|307327906|ref|ZP_07607088.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
 gi|306886424|gb|EFN17428.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
          Length = 359

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 179/347 (51%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  +  DP +  +  EA+ L +    L   I+  +  +    D     EL
Sbjct: 5   VEELIGEHADLEKRLADPAVHADQREARRLNKRYAELTPVIAAYRAWKQAGEDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD   ++E  +  Q  +   +  +   +    +D  D  LEV AG GG ES  +A 
Sbjct: 65  AQ--DDPDFVEEAKELEQSREGLTDRLRLLLVPRDPSDDKDIILEVKAGEGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQ 185
            LLRMY R+AE+  +KTE L+ ++ +  G K   + +K          G   +  LK E 
Sbjct: 123 DLLRMYLRYAERVGWKTEILDANESDLGGYKDVQVAVKTKGGNGATEPGQGVWARLKYEG 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ VNT
Sbjct: 183 GVHRVQRVPATESQGRIHTSAAGVLVTPEA-EEVEVEIGPNDLRIDVYRSSGPGGQSVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITH+PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+  
Sbjct: 242 TDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQVR 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D R   +  +   VLDG+L+  ++A +
Sbjct: 302 TVDRSERIRTYNY-PENRISDHRVGFKAYNLDQVLDGELEPVIQACV 347


>gi|222109995|ref|YP_002552259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
 gi|254790879|sp|B9ME05|RF1_DIAST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221729439|gb|ACM32259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
          Length = 367

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 174/349 (49%), Gaps = 11/349 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          Q R  D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +   +++E +    LL     D  +A++E+ AG GG ES  +A
Sbjct: 69  LEDPDMAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP--------NAYGWLKGEQG 186
             L RMYTR+A    +K E +  ++ E  G K   L I+G           YG LK E G
Sbjct: 129 GDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQPGTGPSGSGVYGALKFESG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N T
Sbjct: 189 GHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHINKT 248

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTE 305
           DSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R    A + +     
Sbjct: 249 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 308

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +IR+Y   P   + D R N+       +++GDL + ++A    +
Sbjct: 309 GDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356


>gi|260914424|ref|ZP_05920893.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
 gi|260631525|gb|EEX49707.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
          Length = 248

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 150/247 (60%), Positives = 191/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AGIK
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q    L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|227552473|ref|ZP_03982522.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257888289|ref|ZP_05667942.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257896821|ref|ZP_05676474.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257899725|ref|ZP_05679378.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|293378550|ref|ZP_06624713.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
 gi|293571480|ref|ZP_06682507.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|227178385|gb|EEI59357.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257824343|gb|EEV51275.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257833386|gb|EEV59807.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257837637|gb|EEV62711.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|291608485|gb|EFF37780.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|292642879|gb|EFF61026.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
          Length = 357

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +    +   +  ++ +       EL
Sbjct: 5   LQSIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTEEL 64

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   + L    +  ++  E  +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LGEKLDDEMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +KTE +E +     G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGENVYSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I + D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMPEA-EEVEIDIEDKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQIKNREKAMKILRARVYD--KIQQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQ 347


>gi|332701398|ref|ZP_08421486.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332551547|gb|EGJ48591.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 357

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 175/341 (51%), Gaps = 8/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  ++ + L ++   P ++ +    K L + R  L   ++  +E +    D     E+
Sbjct: 5   LESLERQFADLESQLSAPDIFNDQERYKKLTKARADLAQVVACFQEFKKLSRDLEDNREM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  I       +  IK  +    E  Q   L     D  D  LE+ AG GG E+ 
Sbjct: 65  LADA-DPEIRAMAESEIASIKQALPRLEEKLQLLLLPKDPLDEKDVILEIRAGTGGEEAS 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+  +K E L  H+    G K     I G   Y  LK E G+HR+ 
Sbjct: 124 LFAADLFRMYMRYAERVGWKVEMLSEHESATGGFKEVIASISGERVYSRLKYESGIHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + ++++I  ++ RID YRASGAGGQHVN T+SAVR
Sbjct: 184 RVPATETQGRIHTSAVTVAVLPEA-EEVDLDIDPTELRIDVYRASGAGGQHVNKTESAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           ITH+PT  VV CQ E+SQHKNKA+A  +LR+++ + ++  +++E                
Sbjct: 243 ITHLPTNTVVTCQDEKSQHKNKAKAMKVLRSRILQSMQAARKDEEDAARRLLVGSGDRSG 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R N+   S S V++G LDD ++A +
Sbjct: 303 RIRTYNF-PQGRITDHRINLTLYSLSAVMEGALDDLVEALI 342


>gi|329770544|ref|ZP_08261922.1| peptide chain release factor 1 [Gemella sanguinis M325]
 gi|328836293|gb|EGF85962.1| peptide chain release factor 1 [Gemella sanguinis M325]
          Length = 362

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  +  +     +E++ ++  +S  +E +D +       EL
Sbjct: 7   LEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVSVFREYKDIVQQINDTKEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              EDD  + +   + ++ ++  +    E  +   L     D  +  +EV   AGG E+Q
Sbjct: 67  LEIEDDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K E G HR+ 
Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P  ++      +E+D R+DT+ +SGAGGQ VNTT SAVR
Sbjct: 187 RVPTTESSGRIHTSTATVVVLPEAEEVEIEI-NENDIRVDTFASSGAGGQSVNTTMSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      K+++G G  
Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYD--KYQQEEQAKFDAERKSKVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|251771888|gb|EES52462.1| peptide chain release factor 2 [Leptospirillum ferrodiazotrophum]
          Length = 294

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 148/277 (53%), Positives = 198/277 (71%), Gaps = 2/277 (0%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           +D  IL E +  L      ++  + E +LS E   + A LE+H GAGGTESQDWA MLLR
Sbjct: 3   EDPEILGEAARILPLFVSRIDQLELEEILSDEYSDSPALLEIHPGAGGTESQDWAQMLLR 62

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWAE + ++T  +++  GEEAGIKSATL +KG +A+G+L+ E GVHRLVRISP+D+ 
Sbjct: 63  MYLRWAESKGYETAVIDLQPGEEAGIKSATLRVKGESAFGYLQAESGVHRLVRISPFDAA 122

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            RRHTSF+S++VYP ++  + +EI + D RIDT+RAS AGGQHVN T SAVR+THIPTG+
Sbjct: 123 KRRHTSFASVFVYPEIEGEVTVEIRDEDIRIDTFRASSAGGQHVNKTSSAVRLTHIPTGI 182

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI--ANIGESSKTEIGWGRQIRSYVL 317
           V+  Q ERSQ +N+  A+ +L+A+L+ELE QK++    A  G  SK E  WG QIRSYVL
Sbjct: 183 VISSQNERSQIQNREMAFKVLKARLFELERQKKKAELDAISGAESKKENAWGSQIRSYVL 242

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QPYQ+VKD RT IE +   +VLDG +D +++  L  +
Sbjct: 243 QPYQIVKDHRTGIESSRVDEVLDGKIDLYIRGYLLAR 279


>gi|195941813|ref|ZP_03087195.1| peptide chain release factor 2 [Borrelia burgdorferi 80a]
          Length = 282

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 143/283 (50%), Positives = 195/283 (68%), Gaps = 4/283 (1%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + E+A  E D + L+        ++ + +     S    E D+N+A+L +H+GAGGTE+ 
Sbjct: 1   MCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEAC 57

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+
Sbjct: 58  DWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLI 116

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVR
Sbjct: 117 RISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVR 176

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI WG Q
Sbjct: 177 ITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQ 236

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 237 IRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279


>gi|121593273|ref|YP_985169.1| peptide chain release factor 1 [Acidovorax sp. JS42]
 gi|166223524|sp|A1W4B8|RF1_ACISJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120605353|gb|ABM41093.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax sp.
           JS42]
          Length = 367

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 174/349 (49%), Gaps = 11/349 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          Q R  D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +   +++E +    LL     D  +A++E+ AG GG ES  +A
Sbjct: 69  LEDPDMAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP--------NAYGWLKGEQG 186
             L RMYTR+A    +K E +  ++ E  G K   L I+G           YG LK E G
Sbjct: 129 GDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQSGTGPSGSGVYGALKFESG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N T
Sbjct: 189 GHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHINKT 248

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTE 305
           DSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R    A + +     
Sbjct: 249 DSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLIGS 308

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +IR+Y   P   + D R N+       +++GDL + ++A    +
Sbjct: 309 GDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356


>gi|312890071|ref|ZP_07749615.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
 gi|311297603|gb|EFQ74728.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
          Length = 357

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   +  +   P + +++     + +E + L   +       + + +   
Sbjct: 1   MLDKLEAIKERWQDVERELSSPDIMKDMKRFAQMNKEYKDLTKVVEQYNIYYNVMSNIDS 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+   E D    +     L  +  + E  +       +     DS +A +E+  G GG
Sbjct: 61  NREILATEKDDEFREMAKAELDELLPQQEELEEKIRLMLIPKDPEDSRNAIVEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+ EK+ +KTE ++  +G   G K     +   +AYG LK E GV
Sbjct: 121 DEAALFAGDLYRMYIRFCEKQGWKTELVDFTEGTAGGYKEIVFNVLAEDAYGTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   D  +++I  +D R D + ASG GGQ VNTT 
Sbjct: 181 HRVQRVPDTETQGRVHTSAASVVVLPEA-DEFDVDIHVNDIRKDLFCASGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVR+TH+PTG+V QCQ ++SQ KN  +A  +LR+++YE+ELQK  E I+   ++  +  
Sbjct: 240 SAVRLTHLPTGIVAQCQDQKSQLKNYDKALQVLRSRIYEMELQKHLEVISKKRKTMVSTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   V + R  +   +  +V++G+L + M+A 
Sbjct: 300 DRSAKIRTYNY-PQGRVTEHRIGLTIYNLPEVMNGNLLEIMEAL 342


>gi|298209284|ref|YP_003717463.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
 gi|83849211|gb|EAP87080.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
          Length = 358

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P +  +      L +E + L   +   +             E+  +
Sbjct: 8   VKQRFDEISDLIIQPDIISDQKRYVELTKEYKDLKKLMDERENYIRVTNRIEEAEEIIAD 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  + +     L   K E+    +  +   +     DS +A +EV AG GG E+  +A
Sbjct: 68  GSDPEMSEMAKMQLDEAKSELPALDDKIRMMLIPKDPEDSKNAVVEVRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RM T++ E + +    ++  +G   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDIYRMLTKFCESKGWNCSTVDFSEGTSGGFKEIQFEVSGDDVYGTLKYEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V+P   +  ++EI   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVFPEA-EEFDVEIDPKDVRIDYFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E       S    G    +IR
Sbjct: 247 EPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRGSMVTSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y       V D R N+      +++DGD+   +   
Sbjct: 307 TYNYA-QGRVTDHRINLTIYDLQNIIDGDIQRIIDEL 342


>gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189039983|sp|A4SV43|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 359

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 175/337 (51%), Gaps = 3/337 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+   RL+ LN+        +++   + L RE   +   +      +    D     E+
Sbjct: 9   LDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFGLYKKAEADAQAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWA 134
             + +      E     Q    E+E    + LL  +  D  + +LE+ AG GG ES  +A
Sbjct: 69  RKDPEMKDFADEEQKQAQATMEELEGALQKLLLPKDVNDERNVFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++ +K E +   + +  G K   L + G + Y  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   ++I+ ++ RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 QTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           IPTG VV+CQ +RSQH+N+ QA  +L +++ +  E +K +  A   +S         +IR
Sbjct: 249 IPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLIGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+       ++DGD+DD   A 
Sbjct: 309 TYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNAL 344


>gi|332663960|ref|YP_004446748.1| peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332774|gb|AEE49875.1| Peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 173/344 (50%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L  +  DP +  ++   K + +  + L   +      ++ + +     + 
Sbjct: 5   LEAIYDRYLNLEEQMSDPDIIVDMDRYKKVSKNYKDLKPIVEAFLIYRNLVGNRDSAKQ- 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           AL ++D  + +   + L+ +  ++E  +    F  +     DS D   E+ +G GG E+ 
Sbjct: 64  ALSDEDPEMREMAQEELESLNPQIEELEDKIKFLLIPKDPEDSRDVIFEIRSGTGGDEAS 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+ E + +K  A+EI++G   G     L I G + YG LK E G HR+ 
Sbjct: 124 LFAGDLYRMYTRYFESKGWKVSAMEINEGSVGGYNKLVLEINGEDVYGTLKFESGAHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P + +  ++EI + D + DT+R+SGAGGQHVN T+S VR
Sbjct: 184 RVPKTESQGRVHTSAATVVVMPKL-EMEDLEIRKEDLKTDTFRSSGAGGQHVNKTESGVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
            TH+PTGVV +    RSQ +N+  A   L  K+YE+  Q  E E A   +S         
Sbjct: 243 FTHLPTGVVSESTDGRSQIQNREIALQRLYQKIYEMRRQAHESEQAAKRKSLVGSGDRSD 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N+   S   VL+GDL+  ++     +
Sbjct: 303 KIRTYNF-PQNRVTDHRINLTIYSLDKVLEGDLEAIIEGLQLYE 345


>gi|269837927|ref|YP_003320155.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
 gi|269787190|gb|ACZ39333.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
          Length = 361

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 6/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L+    DP +  N  +     RER  L+  ++  +  +    +      L
Sbjct: 8   LDQLEARFEELDRLLADPEVVTNPEKLAEYGRERADLEEVVTTYRTRKRVDAEIAEAESL 67

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
               + D   L E      R + E    +   LL      D  +  +E+ AG GG E+  
Sbjct: 68  LRSGDPDLEELAEEELKRLREERERLDNEIRMLLVPKDPNDEKNVIVEIRAGTGGEEAAL 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR +K + +  ++    G K     ++G  AY  LK E GVHR+ R
Sbjct: 128 FAADLFRMYSQYAEKRGWKIDVMSANETGIGGFKEIIFEVRGRGAYSELKYESGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++I+I+E D RID +R++G GGQ VNTTDSAVRI
Sbjct: 188 VPVTESGGRIHTSTATVAVLPEA-EEVDIQINEEDLRIDVFRSTGHGGQSVNTTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQ 311
           TH+PTG+VV CQ E+SQ KN+A+A  +LRA+LY+LE ++  EE + +  S         +
Sbjct: 247 THLPTGLVVTCQDEKSQIKNRAKAMAVLRARLYDLEQRRLHEERSGMRRSQVGTGERAEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +   +  ++L+G++D F++   A  +
Sbjct: 307 IRTYNF-PQDRVTDHRLKLSLGNLPEILNGEIDTFIRELRAADQ 349


>gi|225628073|ref|ZP_03786108.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|261220926|ref|ZP_05935207.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|225616898|gb|EEH13945.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|260919510|gb|EEX86163.1| peptide chain release factor 1 [Brucella ceti B1/94]
          Length = 377

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 322 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 363


>gi|15839238|ref|NP_299926.1| peptide chain release factor 1 [Xylella fastidiosa 9a5c]
 gi|20139358|sp|Q9PA71|RF1_XYLFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9107880|gb|AAF85446.1|AE004071_14 peptide chain release factor 1 [Xylella fastidiosa 9a5c]
          Length = 361

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 172/341 (50%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALVERHEELERLLSDPKIVSDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D  + +     +   +  +    ++ + LL      D  + +LEV AG GG E+ 
Sbjct: 69  ---RTDPEMRELAEQEIAIAQAHLTTLDEELQRLLIPQDPRDECNLFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++++K E      GE  G K     I G  AY  LK E G HR+ 
Sbjct: 126 IFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+R
Sbjct: 186 RVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+PTGVVV+ Q ERSQH N+ +A   L+A+L E E    ++      + K ++G G  
Sbjct: 246 ITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERS--QQATAEAMTRKLQVGSGDR 303

Query: 311 --QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
             +IR+Y   P   + D R  N+      ++++GDLD  + 
Sbjct: 304 SQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLID 343


>gi|265996886|ref|ZP_06109443.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|262551354|gb|EEZ07344.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
          Length = 372

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 316

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 317 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 358


>gi|237740336|ref|ZP_04570817.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
 gi|229422353|gb|EEO37400.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
          Length = 357

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 187/351 (53%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +  ++ L+  + ++    E  +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  G+K     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|21241714|ref|NP_641296.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|294626107|ref|ZP_06704714.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666025|ref|ZP_06731287.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|24418638|sp|Q8PNU5|RF1_XANAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21107082|gb|AAM35832.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|292599556|gb|EFF43686.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604217|gb|EFF47606.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 361

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 176/342 (51%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L     DP +  N    + L RE   L+     ++E + R   +L   E 
Sbjct: 9   LQALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEE-EARAKADLATAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              + +   L E      + +LE    Q  SLL      D  + +LEV AG GG E+  +
Sbjct: 68  LRNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+
Sbjct: 128 AGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RIT
Sbjct: 188 PATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    
Sbjct: 248 HVPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSK--AAAAEAQTRKLQVGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 306 RIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLL 346


>gi|332653076|ref|ZP_08418821.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
 gi|332518222|gb|EGJ47825.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
          Length = 354

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 174/344 (50%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 + S +  +      +++      L +E+  L   +   +        +L    L
Sbjct: 5   LAAIEAKYSQIEARLSASETYEDPALVAKLNKEQTELQPLVETYRTYLRTQQSHLEAESL 64

Query: 76  ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE    + + ++      +   L     D  +  +E+ AG GG E+  +A
Sbjct: 65  LSDPEMKELAQEEWRQSKEDLERLEHQLKILLLPKDPNDDKNVIVEIRAGVGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L RMY+ +AE   +KTE   + + E  G+K  +  I+G  AY  LK E GVHR+ R+ 
Sbjct: 125 HSLYRMYSMFAEANHWKTEVDSVSETELGGVKEISFTIEGDGAYSRLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++ +++I+ +D  +  +R+SGAGGQHVN T SAVR+ H
Sbjct: 185 ETESGGRVHTSTVTVAVLPEM-ETADVQINPADIEMQVFRSSGAGGQHVNKTSSAVRLIH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG VV+CQQERSQ +N+ +A  +L ++LYE E +K    +      ++++G G    +
Sbjct: 244 KPTGTVVECQQERSQFQNRDKAMRILASRLYEAEQEKI--SSEYTAQRRSQVGSGMRNER 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +      ++++GDL++ + A  A  +
Sbjct: 302 IRTYNF-PQGRVTDHRIGLTLYKIDNIMNGDLNEVIDALAAADQ 344


>gi|227877271|ref|ZP_03995344.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256842834|ref|ZP_05548322.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256848802|ref|ZP_05554236.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|262045800|ref|ZP_06018764.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|293381669|ref|ZP_06627650.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295692623|ref|YP_003601233.1| peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|312977646|ref|ZP_07789393.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
 gi|227863127|gb|EEJ70573.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256614254|gb|EEU19455.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256714341|gb|EEU29328.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|260573759|gb|EEX30315.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|290921716|gb|EFD98737.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295030729|emb|CBL50208.1| Peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|310895385|gb|EFQ44452.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
          Length = 362

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 170/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIEDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISSETDPDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q + +     +++        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAQYDAKRKNAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|297180269|gb|ADI16488.1| protein chain release factor a [uncultured bacterium HF4000_05M23]
          Length = 360

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R S +      P    +    + L RE   L + +    +I     D     E+
Sbjct: 9   LKEIADRHSEVERLMSQPETASDPNAIRRLGREYSQLQHVVELWNDITRAQSDMEGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              EDD  +L+     ++ ++  ++      + E L   E +  DA +EV AGAGG E+ 
Sbjct: 69  LTAEDDAEVLEMAKVEVEELQERLDSLTAEIRLELLPKDETELADAVVEVRAGAGGDEAG 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY R+AE RK+K + L  +D    GIK  T  I G  AY  L  E GVHR+ 
Sbjct: 129 LFAAEVFRMYQRYAEARKWKLKILSQNDTGVGGIKEVTFEIAGERAYQRLHLESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++IEIS+ D ++D Y +SGAGGQ VN   +A+R
Sbjct: 189 RVPATESQGRIHTSTATVVVMPKA-EEVDIEISDKDLKVDVYHSSGAGGQSVNKLATAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VVQCQ ERSQ +N+ QA  +LR++L+++EL+K++E  +    ++   G    
Sbjct: 248 ITHLPTGLVVQCQNERSQLQNRMQAMEILRSRLWDMELRKQQEEISANRKAQVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R          VL G+LD F+ A L  ++
Sbjct: 308 KIRTYNF-PQSRITDHRIGYTSHQMQQVLGGELDGFVDALLQEEQ 351


>gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
          Length = 305

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 142/299 (47%), Positives = 203/299 (67%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   ++ +  L D   +LEL   E D  +LQE   N+ ++  E++  + E LLSG  D+N
Sbjct: 3   LQQYQQWKSNLEDAKAVLELLELETDEGLLQEAQTNVVKLNRELDRWELEQLLSGPYDAN 62

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A L ++AGAGGT++QDWA MLLRMYTRWAE + +K +  E  +G+EAGIKSATL I+G 
Sbjct: 63  GAVLAINAGAGGTDAQDWAEMLLRMYTRWAENQGYKVQLAEFSEGDEAGIKSATLEIQGL 122

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E+G HRLVRISPY++N +R TSF+ + V P++++ ++++I E+D  I T R+
Sbjct: 123 RAYGYLKAEKGTHRLVRISPYNANGKRQTSFAGVEVMPILNEDVDLDIPETDLEITTSRS 182

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVR+ HIPT + V+C QERSQ +NK +A  +L+AKL  +  ++R + 
Sbjct: 183 GGKGGQNVNKVETAVRVKHIPTDIAVRCTQERSQLQNKEKALALLKAKLLVIAQEQRAQE 242

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                    E  WG QIR+YV  PYQ+VKDLRTN+E T   DVL+G LD F++A L  +
Sbjct: 243 IAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRTNVETTGVDDVLNGTLDPFIEAYLRQE 301


>gi|195973776|gb|ACG63453.1| peptide chain release factor 2 [Francisella noatunensis]
          Length = 294

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 152/296 (51%), Positives = 205/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+   R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNFGRQKVELENIVHNCEHISETLETLTELL--ELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK   L I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCALKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|330719389|ref|ZP_08313989.1| peptide chain release factor 1 [Leuconostoc fallax KCTC 3537]
          Length = 359

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 171/348 (49%), Gaps = 14/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN    DP +  +      L +E   +   ++  K+ Q  L D     +L
Sbjct: 8   LQTVVDRHDELNELLADPEVMSDSKRYMALSKEEGSIRETVTVFKQYQSVLQDIQDAEDL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D+L+ +K +     E  +   L     D  +  +E+   AGG ES 
Sbjct: 68  L---DDTDMAELARDDLKTLKPQKASLEEQLKVLMLPQDPNDDKNIIMEIRGAAGGDESS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY ++AEK+ +    ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAADLLDMYRKYAEKQNWHINLIDESATEVGGYKEVVVMITGNNVYSKLKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   ++  R HTS +++ V P  +D    + I   D R D YR+SGAGGQHVN T SA+
Sbjct: 185 RVPVTETQGRVHTSTATVGVMPEFEDVDATDLIDPKDVREDVYRSSGAGGQHVNKTSSAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH PTG+ V  Q ERSQ +N+A+AW +L A++Y+     ++  A   +  KT +G G 
Sbjct: 245 RLTHEPTGITVAMQDERSQQQNRAKAWKILNARVYDY--FAQQNEAEYAQKRKTAVGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       V++G+L+D + A +   +
Sbjct: 303 RSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELEDIIDALIIADQ 349


>gi|307942489|ref|ZP_07657838.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
 gi|307774310|gb|EFO33522.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
          Length = 359

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 180/346 (52%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +  + R + L  +    P    +      L RE   L+  +  I+ +     +      
Sbjct: 7   LNTLLDRFAELEHQMSANP----DPSTYVKLSREYSGLEPLVHKIRTLIKAEEELAEAEA 62

Query: 75  LALEED-DCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  + D D  + +        +   +E      +   L    AD+NDA LEV AG GG E
Sbjct: 63  MLDDADTDPEMRELAEAERDELAASLETLTQDVRIGLLPKDSADANDAILEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE   +K E L   +GE  G K     + G N +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRFAELNGWKVEVLSASEGEVGGFKEVIASVSGENVFARLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++IEI+ESD RIDT+RASGAGGQHVNTTDSA
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLPQA-EDVDIEINESDLRIDTFRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTG+VV  Q ERSQHKNKA+A  +LRA++Y+ E  +    +   E+ + ++G G
Sbjct: 242 VRITHEPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERAR--AASERTEARRVQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   V D R  +       ++ G+ L + ++A +
Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGLTLYKLEQIIAGEGLAEVVEALI 344


>gi|34763568|ref|ZP_00144503.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742325|ref|ZP_04572806.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256845604|ref|ZP_05551062.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294785107|ref|ZP_06750395.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
 gi|27886757|gb|EAA23895.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229429973|gb|EEO40185.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256719163|gb|EEU32718.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294486821|gb|EFG34183.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
          Length = 357

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 185/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+ AGAGG
Sbjct: 61  IKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYRA GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRAGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|284032945|ref|YP_003382876.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
 gi|283812238|gb|ADB34077.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
          Length = 359

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 168/340 (49%), Gaps = 12/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
                + L  +  DP L  +   A+ + +    L   +    E      D     ELA E
Sbjct: 8   LKAEYADLERQMSDPELHSDQANARRVGKRYAALAPVVRTYDEWLQTADDIEAAKELAAE 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D +   E      R +   E  +   +     D  DA LE+ AG GG ES  +A  LL
Sbjct: 68  --DPAFADEAVKLEARREELTEKLRLLLVPRDAGDDKDAILEIKAGEGGDESALFAGDLL 125

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLV 191
           +MY ++AE + +KTE L+  + +  G KS T+ +K       G   Y  LK E GVHR+ 
Sbjct: 126 KMYLKFAETQNWKTEVLDSAESDLGGYKSITVAVKAKGTPEPGEAPYAKLKFEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P   + +++EI  +D RID +R+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESQGRIHTSAAGVLVLPEA-EDVDVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTG+VV  Q E+SQ +N+ QA  +LR++L     +  ++ A+    S+   +    
Sbjct: 245 ITHLPTGIVVSMQNEKSQLQNREQAMRVLRSRLLAAAQEAADQEASDARRSQIRTVDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P     D R   +  +   VL GDL   ++A 
Sbjct: 305 RIRTYNF-PENRFSDHRVGYKAHNLDQVLGGDLAPVIQAL 343


>gi|114330834|ref|YP_747056.1| peptide chain release factor 1 [Nitrosomonas eutropha C91]
 gi|122314234|sp|Q0AHU1|RF1_NITEC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114307848|gb|ABI59091.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosomonas
           eutropha C91]
          Length = 359

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/339 (32%), Positives = 178/339 (52%), Gaps = 4/339 (1%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            G+ D       RL  L+    +  +  ++   + L RER  ++    F    Q    D 
Sbjct: 3   KGIVDQLTRLSIRLEELDKLLSNEKITADLDNYRKLSRERSEIEPVTRFYHTYQQVEQDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGT 128
              +E++++       +   D  ++   ++E +  + LL     D  + +LE+ AG GG 
Sbjct: 63  ATAMEMSVDPQFRDFAEAEIDADKQKLADIETEILKQLLPRDPNDERNIFLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES  +A  L RMY+R+AE+  ++ E +  +  E  G K     I G  AY  LK E G H
Sbjct: 123 ESALFAGDLFRMYSRYAEREGWQVEIVSQNPSEVGGYKEIIARIIGHGAYSRLKFESGAH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P  D+   + ++ +D RIDT+RASGAGGQH+N TDS
Sbjct: 183 RVQRVPATETQGRVHTSTCTVAVLPEADEISGVTLNPADLRIDTFRASGAGGQHINKTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITH+PTG+V +CQ+ RSQHKNKAQA ++L +++ + +++ ++        S    G 
Sbjct: 243 AVRITHLPTGIVAECQEGRSQHKNKAQAMSVLISRILDKQVRAQQAEQAAARKSLVGSGE 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              +IR+Y   P   + D R N+       ++DG+LD+ 
Sbjct: 303 RSERIRTYNF-PQGRITDHRINLTLYKIEQIMDGELDEL 340


>gi|83816205|ref|YP_445488.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294507374|ref|YP_003571432.1| peptide chain release factor 1 [Salinibacter ruber M8]
 gi|119361602|sp|Q2S2U3|RF1_SALRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83757599|gb|ABC45712.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294343702|emb|CBH24480.1| peptide chain release factor 1 [Salinibacter ruber M8]
          Length = 357

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 184/346 (53%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   + +   DP +  +    + L +E   L+  +  I   +  L +   L  +
Sbjct: 7   LDKVKHRFQEVESLMADPEVANDPDRMRELGQEHSRLEEVVEAIDRYERLLDERDELEGM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E    +     + L++++ ++    E  + + +     +  +A +E+ AGAGG E+ 
Sbjct: 67  IRDES-GEMEALAKEELEQLETKLPAVEEDLKQKLIPKDPEEEKNAIVEIRAGAGGDEAS 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L R+YT++A+++ +  E ++   G + G +     +KG + YG LK E GVHR+ 
Sbjct: 126 LFAGDLFRLYTQYAKQQGWTYELIDASPGTQGGFREVIFAVKGEDVYGTLKYEAGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + ++++I+ SD  I+T++A+G GGQ VNTTDSAVR
Sbjct: 186 RVPETESSGRIHTSAATVAVLPEA-EEVDVDINPSDLTIETFKATGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           I H P+GV V CQ E+SQHKN+++A  +LR+++YE + ++++        S    G    
Sbjct: 245 IKHAPSGVEVSCQDEKSQHKNRSKAMRVLRSRVYEKKREEQQAEREEARRSMVGSGDRSA 304

Query: 311 QIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R     +  S   ++DG++D  + A  A +
Sbjct: 305 KIRTYNF-PQDRVTDHRLEGGQKNHSLQPIMDGEIDPIIDALRAEE 349


>gi|325267755|ref|ZP_08134406.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
 gi|324980879|gb|EGC16540.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
          Length = 358

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 177/346 (51%), Gaps = 8/346 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D   N   RL  +      P    ++   + L +E   L   +   +       D  
Sbjct: 4   SILDKLQNLAHRLEEVTALLGSPEATSDMDNYRRLNQEHAELTPIVETYRAYTQAESDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  EAQEMLSDPEMKDFAAEEIEAAKAKIEMLDLALQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++TE +  ++ +  G K   + + G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQTEIVSANESDLGGYKEVIVRLVGLGAYSKLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE+++ D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NK +A  +L A+L +++  KRE  A      K+ IG G
Sbjct: 244 VRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLNDMQ--KREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+       V+DGD+++   A +A
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAALMA 346


>gi|306844842|ref|ZP_07477425.1| peptide chain release factor 1 [Brucella sp. BO1]
 gi|306274774|gb|EFM56555.1| peptide chain release factor 1 [Brucella sp. BO1]
          Length = 359

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|328957995|ref|YP_004375381.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
 gi|328674319|gb|AEB30365.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
          Length = 358

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 172/345 (49%), Gaps = 8/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++   R   LN    DP +  +      L +E   +   ++  +  ++   D   
Sbjct: 1   MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVSQDISD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  E+ D  + +   + L  +K E    +       L   E D  +  +E+   AGG
Sbjct: 61  TEEMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKILMLPKDENDDRNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L  MY ++A+ + ++TE L+ +     G K  TL+I G N Y  LK E G 
Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWRTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+ + + D R D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMPEA-EEVELNLPDKDIRTDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEI 306
           SAVR+TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+ ++   + E     +S+    
Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQAAQSEYDAERKSAVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R  +       +L G LD+ + A +
Sbjct: 300 DRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDALI 343


>gi|28199883|ref|NP_780197.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71899967|ref|ZP_00682113.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182682635|ref|YP_001830795.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|32129935|sp|Q87A17|RF1_XYLFT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691124|sp|B2IA85|RF1_XYLF2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28058004|gb|AAO29846.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71730254|gb|EAO32339.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182632745|gb|ACB93521.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|307578915|gb|ADN62884.1| peptide chain release factor 1 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 361

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 173/341 (50%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D  + +     +   +  +    +Q + LL      D  + +LEV AG GG E+ 
Sbjct: 69  ---RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++++K E      GE  G K     I G  AY  LK E G HR+ 
Sbjct: 126 IFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+R
Sbjct: 186 RVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+PTGVVV+ Q ERSQH N+ +A   L+A+L  +E Q+ ++      + K ++G G  
Sbjct: 246 ITHLPTGVVVESQTERSQHANRDKAMKRLKAQL--IESQRSQQATAEAMTRKLQVGSGDR 303

Query: 311 --QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
             +IR+Y   P   + D R  N+      ++++GDLD  + 
Sbjct: 304 SQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLID 343


>gi|257461132|ref|ZP_05626230.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
 gi|257441506|gb|EEV16651.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
          Length = 355

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 178/338 (52%), Gaps = 9/338 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   L+    DP +  ++     L +E++ ++       E    L        L  + 
Sbjct: 10  LDRYDELSRMLSDPAITADIANMTALSKEQRSIEPIKEAASEYLKILNQIEENKALLSDA 69

Query: 80  DDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           D   + +E   NL+  K ++E K +   L     D  + +LE+ AG GG E+  +A  LL
Sbjct: 70  DLGELAKEELKNLETQKPQLEEKIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             Y R+A+ R +K E +   +G   G K   LL+KG  AY  LK E G HR+ R+   +S
Sbjct: 130 GAYLRYADLRGYKCEIVSTSEGSVGGYKEVILLVKGAGAYSRLKFEGGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P ++DS EI+I+ +D RID  R+SG GGQ VNTTDSAVRITHIPTG
Sbjct: 190 QGRVHTSAITVAVMPEIEDS-EIQINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q  + QHKNK  A  +L+A+LY+++  ++E +    +  K ++G G    +IR+Y
Sbjct: 249 LVVTNQDGKDQHKNKEAAMKVLKARLYDMQ--EQERLEKERKDRKDQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
              P   + D R N+       ++ G L D+ +   +A
Sbjct: 307 NY-PQNRISDHRINLTLYRLDAIMAGGLFDEIIDPLIA 343


>gi|161507266|ref|YP_001577220.1| peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260102570|ref|ZP_05752807.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
 gi|172048215|sp|A8YUJ1|RF1_LACH4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160348255|gb|ABX26929.1| Peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260083597|gb|EEW67717.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IANETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  IG G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDY--YESQNQAKYDAKRKNAIGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|153952433|ref|YP_001398893.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223543|sp|A7H5W3|RF1_CAMJD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152939879|gb|ABS44620.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 355

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 182/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKTKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+ ++          +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDLNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRVHTSAITVAVMPEV-DDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQENER--LAKESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ DG  D+ ++  + 
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLIT 343


>gi|307299656|ref|ZP_07579452.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306914708|gb|EFN45098.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 360

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 118/338 (34%), Positives = 178/338 (52%), Gaps = 5/338 (1%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--AL 77
            +R   +  +   P +  +  +     ++   L   I+   EI     +     E+    
Sbjct: 11  RERFKEVEKELSKPEVASDPDKLMEYGKKHAELSEIINLYSEIDSMKGELEEWHEMKATA 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE++  ++  T  +L+      E      L+   AD  +  +E+ AG GG E+  +A  L
Sbjct: 71  EENEQEVIANTISDLENRIARKELNLKGLLVPDLADERNIIIEIRAGTGGEEAALFAADL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTR+AE+  +K+E ++ ++ +  G K     I+G + +  LK E GVHR+ R+   +
Sbjct: 131 FRMYTRYAERNNWKSEIIDSNETDIGGFKEVIFQIRGRSVFSKLKYESGVHRVQRVPTTE 190

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P V ++ E++I  +D RIDTYR+SGAGGQHVN TDSAVRI H PT
Sbjct: 191 SGGRIHTSTATVAVLPEVSET-EVKIDPADLRIDTYRSSGAGGQHVNKTDSAVRIVHEPT 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYV 316
           G+VV  Q+ERSQH+NKA+A  +LRA+LYE+   K E EI     +         +IR+Y 
Sbjct: 250 GIVVAVQKERSQHQNKARALEILRARLYEMYSSKAENEITEARRTQIGTGERSEKIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             P   V D R N        V+DGDLD+ +    A  
Sbjct: 310 F-PQNRVTDHRINFTSYRLLYVMDGDLDELVTELSAAD 346


>gi|296327945|ref|ZP_06870480.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154901|gb|EFG95683.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 365

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 120/352 (34%), Positives = 184/352 (52%), Gaps = 11/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D  
Sbjct: 8   KMFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIE 67

Query: 71  ILLELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            + E    E D  + +       +  +++    E  +   L   + D  +  +E+  GAG
Sbjct: 68  FIKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAG 127

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E G
Sbjct: 128 GDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESG 187

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN T
Sbjct: 188 VHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAGGQHVNMT 247

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++
Sbjct: 248 DSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQV 305

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 306 GTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 356


>gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
          Length = 357

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 179/338 (52%), Gaps = 4/338 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +  +     + ++  +   L ++ + +   +   +  +    D     EL
Sbjct: 10  LEAIEKRYEEIQNRLSSQDVIRDRAQFAKLSKDLKDIGEVVDLYRRYKKVQKDIKEAQEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               +   + +E    L+R +  +E   +   L   E DS +  LE+ AG GG E+  + 
Sbjct: 70  LKSREFEELAKEEIKRLKREEERIEKELKILMLPKDERDSRNVILEIRAGVGGEEAALFV 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY ++AE+R +K   L  +     G K    LI+G  AY  LK E GVHR+ RI 
Sbjct: 130 ADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIALIEGVGAYSRLKYESGVHRVQRIP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P VD++ E+EI+  D +I+T+RASGAGGQ+VNTT++AVR+TH
Sbjct: 190 RTESGGRIHTSTATVAVLPEVDET-ELEINPQDLKIETFRASGAGGQYVNTTETAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           IPTG+ V CQ ERSQ +NK +A  +L A+L +  E QK EEIA   +          +IR
Sbjct: 249 IPTGISVACQDERSQFQNKQKALKILYARLKDFYERQKEEEIAKERKMQVGTGERSEKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   V D R N+      DVL+G LD+ ++A +
Sbjct: 309 TYNF-PQGRVTDHRINLTLYKLHDVLEGKLDEIIEALI 345


>gi|148558947|ref|YP_001259697.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|265987430|ref|ZP_06099987.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|148370204|gb|ABQ60183.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|264659627|gb|EEZ29888.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
          Length = 377

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 322 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 363


>gi|323466867|gb|ADX70554.1| Peptide chain release factor 1 [Lactobacillus helveticus H10]
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IANETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDY--YESQNQAKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
 gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97]
 gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11]
 gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|215403141|ref|ZP_03415322.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|215410938|ref|ZP_03419746.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426621|ref|ZP_03424540.1| peptide chain release factor 1 [Mycobacterium tuberculosis T92]
 gi|215430186|ref|ZP_03428105.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|215445477|ref|ZP_03432229.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|218753007|ref|ZP_03531803.1| peptide chain release factor 1 [Mycobacterium tuberculosis GM 1503]
 gi|219557200|ref|ZP_03536276.1| peptide chain release factor 1 [Mycobacterium tuberculosis T17]
 gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186238|ref|ZP_05763712.1| peptide chain release factor 1 [Mycobacterium tuberculosis CPHL_A]
 gi|260200352|ref|ZP_05767843.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|260204557|ref|ZP_05772048.1| peptide chain release factor 1 [Mycobacterium tuberculosis K85]
 gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554911|ref|ZP_06444121.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54039048|sp|P66017|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041593|sp|P66016|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223571|sp|A1KI87|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223574|sp|A5U1Z8|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790891|sp|C1AMU3|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1322423|emb|CAA97732.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           tuberculosis H37Rv]
 gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           bovis AF2122/97]
 gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           F11]
 gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289439543|gb|EFD22036.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           W-148]
 gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           4207]
          Length = 357

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 174/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N  EA+ + R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
                D S   E    L+    E++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  VA--SDESFAAEV-AALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR
Sbjct: 125 ADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  +++I ESD RID +R+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   +  
Sbjct: 245 VRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 305 SERIRTYNF-PENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADK 350


>gi|313113834|ref|ZP_07799401.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623861|gb|EFQ07249.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 363

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 172/346 (49%), Gaps = 9/346 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R   L+ +   P    +    + LMRE    +  +   +  Q           L 
Sbjct: 9   DAVCHRFEELSIRLNQPDTAADPALFRRLMREYHDAEPVVQAYRAWQTAQDHLAQAKALL 68

Query: 77  LEED--DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            E    D    Q     +     +VE  +       L     D  +  +E+  GAGG E+
Sbjct: 69  EEPGALDPDFKQMIQQEISEKSQDVEKLENNLKILLLPKDVNDGKNVIVEIRGGAGGEEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ LLRMYT + + R ++ E L +++ E  G+K A   + G  AY  LK E GVHR+
Sbjct: 129 ALFAHSLLRMYTMYVQSRGWQLEMLNLNETELGGVKEAIFSVDGAGAYNRLKYESGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGGQH+N T SA+
Sbjct: 189 QRVPETETQGRIHTSTATVAVMPQA-EEVDFALDMKDLRIDTFRSSGAGGQHINKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           R+TH+PTG+VV+CQ ERSQ +NK +A  +LR++L   + +++++  N     +   G   
Sbjct: 248 RVTHLPTGMVVECQNERSQFQNKDKALEILRSRLLAQKQKQQQDAINASRQGQVGTGDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P     D R  +   + S ++DG+LD+ + A    ++
Sbjct: 308 EKIRTYNF-PQDRCTDHRIGLTVHNLSKIMDGNLDEVIDALATREQ 352


>gi|317473032|ref|ZP_07932332.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899461|gb|EFV21475.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 357

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 124/349 (35%), Positives = 182/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V+RL  +  +  DP +  +    + LM+E+  L   +   KE      +   
Sbjct: 1   MFDKLESLVERLDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  VE  +   + LL      D  +  +E+ AGAGG
Sbjct: 61  SLELLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E L  ++    G K    +I G  AY   K E GV
Sbjct: 121 DEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P V+D        +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEVEDVEVEV-DLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+TH+PTG+VV CQ E+SQ KNK +A  +LR++LYELE QK  +  A   +S     
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAEAEKRKSQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       V++GDLD+ + +  A  +
Sbjct: 300 DRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQ 347


>gi|89898158|ref|YP_515268.1| peptide chain release factor 1 [Chlamydophila felis Fe/C-56]
 gi|119361521|sp|Q255B5|RF1_CHLFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89331530|dbj|BAE81123.1| peptide chain release factor RF-1 [Chlamydophila felis Fe/C-56]
          Length = 361

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 181/342 (52%), Gaps = 13/342 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
           ++RL  +  K  DP ++ N  E   L RE   L    +   ++   +  L D+   L   
Sbjct: 9   LKRLEEVEVKISDPEIFNNPKEYSSLSREHARLTELKNVYDKVLRHEKILNDDKHAL--- 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
            +E D  ++    + +Q  K E+E   K  E+LL      D  +  +E+ AG GG E+  
Sbjct: 66  AQEKDPEMIAMLEEGIQSGKSEIEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R
Sbjct: 126 FVGDCVRMYHLYASAKGWKYEELSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   ++  R HTS  ++ V P   +D  E+ + E D +IDT+RASGAGGQHVN TDSAVR
Sbjct: 186 VPETETQGRVHTSAITVAVLPEPAEDDEEVFVDEKDLKIDTFRASGAGGQHVNVTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S++   G    
Sbjct: 246 ITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSAQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y       V D R  +   +   V++GDLD    A ++
Sbjct: 306 RIRTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDTITSALVS 346


>gi|228469749|ref|ZP_04054715.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
 gi|228308684|gb|EEK17417.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
          Length = 328

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 198/320 (61%), Gaps = 11/320 (3%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
            A+  MR    + + I   + +     +  +  +   EE      Q+  D   R    VE
Sbjct: 3   RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYKEEAVEE--QDVDDAYARAIKLVE 60

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             +  ++LS E D   A L+V+AGAGGTESQDWA+ML+RMY RWAE+  +K       DG
Sbjct: 61  DLELRNMLSAEEDRLGAVLKVNAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDG 120

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           ++AG+K+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE
Sbjct: 121 DDAGVKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIE 180

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITH--------IPTGVVVQCQQERSQHKN 272
           +E++ +    DT+R+SGAGGQ+VN  ++ VR+ +        +P  +V++  + RSQ +N
Sbjct: 181 VEVNPALLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGVPEEIVIENTETRSQLEN 240

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A  +LR++LY+ EL++R    N  E++K +I WG QIRSYV    + VKD RT  + 
Sbjct: 241 RENALRLLRSQLYDKELERRRAAQNEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQT 299

Query: 333 TSPSDVLDGDLDDFMKATLA 352
           +  + V+DGD+D F+KA L 
Sbjct: 300 SDVNGVMDGDIDAFIKAYLM 319


>gi|265982882|ref|ZP_06095617.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306838261|ref|ZP_07471111.1| peptide chain release factor 1 [Brucella sp. NF 2653]
 gi|264661474|gb|EEZ31735.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306406664|gb|EFM62893.1| peptide chain release factor 1 [Brucella sp. NF 2653]
          Length = 359

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVNALIS 345


>gi|295100871|emb|CBK98416.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii L2-6]
          Length = 361

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 174/349 (49%), Gaps = 15/349 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILL 73
           +   +R   L+ +   P    +  + + LM+E       +     +   QD L     LL
Sbjct: 9   EAVCRRFEELSIRLNQPETAADPAQLRRLMQEYHEAQPVVDAYHALTTAQDHLAQAKALL 68

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTE 129
           E   E  D          L     +V   +       L     D     +E+ AGAGG E
Sbjct: 69  E-GDEPLDADFKAMVQQELSEKSQDVAELENNLKILLLPKDANDEKSVIMEIRAGAGGEE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A+ L+RMYT + + R ++ E L +++ E  G K A   + G  AY  LK E GVHR
Sbjct: 128 AALFAHSLVRMYTMYVQSRGWEMELLNLNETELGGTKEAVFAVNGRGAYNRLKYESGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGGQH+N T SA
Sbjct: 188 VQRVPETETQGRIHTSTATVAVMPQA-EEVDFALDMKDLRIDTFRSSGAGGQHINKTSSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I      ++G G
Sbjct: 247 IRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINADRAGQVGTG 304

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P     D R  +   +   ++DGDLDD + A    ++
Sbjct: 305 DRSEKIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGDLDDIIDALATREQ 352


>gi|308177036|ref|YP_003916442.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
 gi|307744499|emb|CBT75471.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
          Length = 357

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 183/346 (52%), Gaps = 14/346 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++  + +  +  DP ++ +   A+ L R    L+  +    + Q    D     E+A 
Sbjct: 7   SLLEEHAAIQAQLSDPAVYADQALARKLGRRSAQLNGIVEAYNKWQTATDDLEAAQEMAD 66

Query: 78  EEDD-CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           E+ D    +Q  ++ L +++ ++       +   E D  +  LEV  G GG E+  +A  
Sbjct: 67  EDPDFAEEVQALTEELPQLEEKLRRL---LIPRDENDGRNVILEVKGGEGGDEAALFAAD 123

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRL 190
           LLRMYTR+AE + +K E +  ++ +  G K A + IKG         Y  LK E GVHR+
Sbjct: 124 LLRMYTRFAEHKGWKVEMISFNESDLGGYKDAQVAIKGNSNDPAEGVYAQLKFEGGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V P VD+  E++I ++D +ID YR+SG GGQ VNTTDSAV
Sbjct: 184 QRVPVTESQGRIHTSAAGVLVLPEVDEPEEVDIHQNDLKIDVYRSSGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--YELELQKREEIANIGESSKTEIGW 308
           RITH+PTG+VV  Q E+SQ +N+  A  +LR++L  ++ E+  +E  A         +  
Sbjct: 244 RITHLPTGIVVAMQNEKSQIQNREAAMRVLRSRLLAHQQEIIDKENSAQRASQ-IRTMDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RT  +  +   V+DGDL   +++ + + 
Sbjct: 303 SERIRTYNY-PENRIADHRTGYKAYNLDAVMDGDLQPVVESCIQMD 347


>gi|254717939|ref|ZP_05179750.1| peptide chain release factor 1 [Brucella sp. 83/13]
          Length = 351

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 2   DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 57

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 58  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 118 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 177

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 178 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 236

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 237 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 295

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 296 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVNALIS 337


>gi|256158374|ref|ZP_05456272.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|256253793|ref|ZP_05459329.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|260169300|ref|ZP_05756111.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261758813|ref|ZP_06002522.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261738797|gb|EEY26793.1| peptide chain release factor 1 [Brucella sp. F5/99]
          Length = 359

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|195973772|gb|ACG63451.1| peptide chain release factor 2 [Francisella noatunensis subsp.
           orientalis]
          Length = 294

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 153/296 (51%), Positives = 205/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELL--ELAEEDESLIQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ +
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQ 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGW + E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADXRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVL-DQSRIK 294


>gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
 gi|317116214|gb|ADU98702.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
          Length = 360

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 179/342 (52%), Gaps = 5/342 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRLS L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 9   LERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREADLEGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            LE+ D + + +        +L     + + +L      D  +A++E+ AG GG ES  +
Sbjct: 69  -LEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTGGDESALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+A  + +K E +  ++ E  G K   L I+G +AYG L+ E G HR+ R+
Sbjct: 128 AGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ 
Sbjct: 188 PATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVV 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQI 312
           H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R    A + +          +I
Sbjct: 248 HLPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSERAAKEAALRKGLIGSGDRSDRI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           R+Y   P   + D R N+       V++GDL + ++A    +
Sbjct: 308 RTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAR 348


>gi|237816235|ref|ZP_04595228.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260758776|ref|ZP_05871124.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260884577|ref|ZP_05896191.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297247116|ref|ZP_06930834.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
 gi|237788302|gb|EEP62517.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260669094|gb|EEX56034.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260874105|gb|EEX81174.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297174285|gb|EFH33632.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
          Length = 377

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 322 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 363


>gi|29840418|ref|NP_829524.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
 gi|33301431|sp|Q822M2|RF1_CHLCV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29834767|gb|AAP05402.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
          Length = 361

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 180/339 (53%), Gaps = 7/339 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++RL  +  K  +P +++N  E   L +E   L    +   ++  +        E   +E
Sbjct: 9   LKRLEEVEVKISNPEIFENPKEYSSLSKEHARLSELKNVYDKVLGQEKILNDDKEALAQE 68

Query: 80  DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
            D  ++    + +Q  K EV+   K  E+LL      D  +  +E+ AG GG E+  +  
Sbjct: 69  KDPEMIAMLEEGIQLGKAEVDKLYKVLENLLVPPDPDDDLNVIMELRAGTGGDEAALFVG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
             +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+  
Sbjct: 129 DCVRMYHLYASTKGWKYEVLSASESDIGGYKEYVMGISGAAVKRLLQYEAGTHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
            ++  R HTS  ++ V P   +D  E+ I E D +IDT+RASGAGGQHVN TDSAVRITH
Sbjct: 189 TETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R++ A+   S++   G    +IR
Sbjct: 249 LPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRQKEASAMRSAQVGSGDRSERIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y       V D R  +   +   V++GDLD    A ++
Sbjct: 309 TYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDAITSALVS 346


>gi|94271210|ref|ZP_01291905.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93450530|gb|EAT01680.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 177/342 (51%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  +R   L  +  DP +  +    + L +E  H+        + +    D     +L
Sbjct: 5   LADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANGQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  IL+      + ++  +    +  +   +     D  +  LE+ AG GG E+ 
Sbjct: 65  LQEEDDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY+R+AE+  +K E L     E  G K    LI G + +  LK E GVHR+ 
Sbjct: 125 LFVANLFRMYSRYAEQLGWKVEVLSSSTTEVGGYKEIIALISGDHVFSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +E+ I+ ++ + D +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETETQGRVHTSAVTVAVLPEA-EEVELSINPAELKYDVFRSSGPGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++++   +    K+++G G  
Sbjct: 244 VTHLPTGLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R N+      DV+ G LD+ ++  
Sbjct: 302 SERIRTYNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPL 342


>gi|6469929|gb|AAF13494.1|AF130466_1 peptide chain release factor 2 [Campylobacter jejuni]
          Length = 269

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 150/268 (55%), Positives = 192/268 (71%), Gaps = 2/268 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             ++  +++  +   +   LLSGE D  +A + +H GAGGTES DWA++L RMY R+ E+
Sbjct: 2   LFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCER 61

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             FK E L+  +GEEAG+K  + L+KG NAYG+LK E G+HRLVR SP+DS  RRHTSFS
Sbjct: 62  EGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFS 121

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P +DD IEIEI E D RID YRASGAGGQHVN T+SAVRITH PTG+VVQCQ +R
Sbjct: 122 SVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDR 181

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNKA A+ ML+++LYELEL K+++ AN     K+EIGWG QIRSYVL PYQ VKD R
Sbjct: 182 SQHKNKATAFKMLKSRLYELELMKQQDSAN--TGEKSEIGWGHQIRSYVLFPYQQVKDNR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +    +   ++LDGD+   ++  L   K
Sbjct: 240 SGEAFSQVDNILDGDIKKMIEGVLIALK 267


>gi|71275264|ref|ZP_00651551.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|170731262|ref|YP_001776695.1| peptide chain release factor 1 [Xylella fastidiosa M12]
 gi|238687964|sp|B0U5Z3|RF1_XYLFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71164073|gb|EAO13788.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|167966055|gb|ACA13065.1| peptide chain release factor 1 [Xylella fastidiosa M12]
          Length = 361

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 171/341 (50%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D  + +     +   +  +    +Q + LL      D  + +LEV AG GG E+ 
Sbjct: 69  ---RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++++K E      GE  G K     I G  AY  LK E G HR+ 
Sbjct: 126 IFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+R
Sbjct: 186 RVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+PTGVVV+ Q ERSQH N+ +A   L+A+L E E    ++      + K ++G G  
Sbjct: 246 ITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERS--QQATAEAMTRKLQVGSGDR 303

Query: 311 --QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
             +IR+Y   P   + D R  N+      ++++GDLD  + 
Sbjct: 304 SQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLID 343


>gi|289663473|ref|ZP_06485054.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667596|ref|ZP_06488671.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 361

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 177/342 (51%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++ + R   +L   E 
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALED-ETRAKADLAAAEA 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              + +   L E      + +LE    Q   LL      D  + +LEV AG GG E+  +
Sbjct: 68  MRSDPEMRELAEEEIAAAQARLEELDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+
Sbjct: 128 AGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RIT
Sbjct: 188 PATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G    
Sbjct: 248 HVPSGVVVECQTERSQHANRDKAMKRLKAQLAEAERSK--AAAAEAQTRKLQVGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D R   +      ++++GDLD  +   L
Sbjct: 306 RIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLL 346


>gi|78185965|ref|YP_374008.1| peptide chain release factor 1 [Chlorobium luteolum DSM 273]
 gi|119361573|sp|Q3B6R6|RF1_PELLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78165867|gb|ABB22965.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           luteolum DSM 273]
          Length = 358

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L     DP    +    + L +E   L   +               
Sbjct: 1   MFDKLQSIKERHLDLERMLADPAAAGDQTRFRRLNKEYSDLKEIVQAYDRYASARQQLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +   E+D  +     + +  ++  +    +  +   L   EADS +  +E+ AG GG
Sbjct: 61  SRHMQKAEEDPEMKAMAREEMLELEERIPGLEQELRILLLPKDEADSRNVIMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ ++ E L+ ++     G +  TL I G + YG LK E G
Sbjct: 121 EEAALFAADLMRMYQRYAERQGWRCEVLDYNESSGPGGFREVTLTISGHDVYGTLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLPEA-EEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTE 305
           ++AVRITH PTG+V  CQ+ERSQ +NK +A  ML AKLY+++LQ++++  A++  +    
Sbjct: 240 ETAVRITHEPTGLVAACQEERSQLQNKERAMKMLMAKLYDIKLQEQQQERADMRRTMVAS 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                +IR+Y   P   V D R           + G++ + + A 
Sbjct: 300 GDRSAKIRTYNY-PQSRVTDHRIGFTSHGLPHFMQGEIGELIDAL 343


>gi|1526559|dbj|BAA08795.1| peptide termination factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 370

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 180/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L     +VE+     +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+    +    G    
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGARSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + R+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 308 KFRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
 gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
          Length = 291

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 137/281 (48%), Positives = 196/281 (69%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL   E D S+LQE   NL ++  E++  + + LLSG  D+  A L ++AGAGGT++QDW
Sbjct: 2   ELLELETDESLLQEAYTNLSQLSRELDQWELQQLLSGPYDAGGAVLTINAGAGGTDAQDW 61

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRMYTRW E++ +K    EI +G+EAG+KSATL I G  AYG+L+ E+G HRLVRI
Sbjct: 62  AEMLLRMYTRWGERQGYKVHLAEISEGDEAGLKSATLEIVGRYAYGYLRSEKGTHRLVRI 121

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+++N +R TSF+ + V P++D S+E++I E D  + T RA G GGQ+VN  ++AVRI 
Sbjct: 122 SPFNANDKRQTSFAGVEVMPILDRSVELDIPEKDLEVTTSRAGGKGGQNVNKVETAVRIV 181

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+ V+C +ERSQ +NK +A  +L+AKL  +  ++R +          E  WG QIR
Sbjct: 182 HLPTGLAVRCTEERSQLQNKEKALVLLKAKLLVVAREQRAKEIAEIRGDMVEAAWGNQIR 241

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +YV  PYQMVKDLRT +E T+ +DV++G+L+ F++A L  +
Sbjct: 242 NYVFHPYQMVKDLRTGVETTAIADVMNGELEPFIQAYLRQE 282


>gi|295698346|ref|YP_003603001.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
 gi|291156977|gb|ADD79422.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
          Length = 369

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 155/359 (43%), Positives = 226/359 (62%), Gaps = 14/359 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ- 63
           R+   L  +F ++     L+ L  K     +W     +K L      L   ++  +    
Sbjct: 15  REFQNLKNIFRYEEKKIELTTLRNKISSNEIW----RSKKLSS-LIGLQKLVAIKEIEIE 69

Query: 64  ------DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
                   L +  IL+E   E+ D   L+ET  +L  ++  +E  +   L S E D  D 
Sbjct: 70  KIEKIKQYLENIEILIECLKEKRDEDFLKETYRDLFNVRSMIENLKIFRLFSKENDFCDC 129

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           Y+++ +G+GG +SQDW +MLL+MY +W++ + F++  L    GE  GIKS+T++IKG  A
Sbjct: 130 YIDLQSGSGGIDSQDWTSMLLKMYLKWSDLKNFRSYVLNTSYGEITGIKSSTIMIKGRYA 189

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRAS 236
           YGWL+ E G+HRLVR SP+DS+ RRHTSFSS++VYPV++D   EI I  SD +ID+Y++S
Sbjct: 190 YGWLRTETGIHRLVRKSPFDSSGRRHTSFSSVFVYPVLEDPDQEIRIQSSDLKIDSYKSS 249

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH N T+SA+RITHIPTG+V QCQ  RSQHKNK QA   L+ KLYE++ ++++E  
Sbjct: 250 GAGGQHTNKTESAIRITHIPTGIVTQCQSNRSQHKNKEQALKQLKNKLYEIQKKEKQENQ 309

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            + E++K +I WG QIRSY+L  +  VKDLRT IE+ +   VL+G +D F+KA L ++K
Sbjct: 310 KVIENNKFDIAWGNQIRSYIL-DHSRVKDLRTGIEERNVRSVLEGKIDKFIKANLILRK 367


>gi|171462958|ref|YP_001797071.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692839|sp|B1XSY0|RF1_POLNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171192496|gb|ACB43457.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 359

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 3/337 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+   RL+ LN+        +++   + L RE   +   +      +    D     E+
Sbjct: 9   LDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFYLYKQAEADAQAAEEM 68

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      E     L  ++      Q   L   E D  + +LE+ AG GG E   +A
Sbjct: 69  RKDPEMKEFADEEQKQALATMEALESTLQKLLLPKDENDERNVFLEIRAGTGGDEGALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++ +K E +   + +  G K   L + G   Y  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVLRLVGQAVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   ++I+ ++ RIDT+RASGAGGQH+N TDSA+RITH
Sbjct: 189 QTETQGRIHTSACTVAVMPETDELEAVKINPAELRIDTFRASGAGGQHINKTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           +PTG VV+CQ +RSQH+N+ QA  +L +++ +  E +K +  A   +S         +IR
Sbjct: 249 LPTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLVGTGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+       ++DGD+DD   A 
Sbjct: 309 TYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNAL 344


>gi|23502722|ref|NP_698849.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161619787|ref|YP_001593674.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|254700516|ref|ZP_05162344.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|254704887|ref|ZP_05166715.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|254708865|ref|ZP_05170676.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|254713712|ref|ZP_05175523.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|254715938|ref|ZP_05177749.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|256030391|ref|ZP_05444005.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|256370269|ref|YP_003107780.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260567639|ref|ZP_05838109.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|261217701|ref|ZP_05931982.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261316358|ref|ZP_05955555.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261321452|ref|ZP_05960649.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261751020|ref|ZP_05994729.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261755581|ref|ZP_05999290.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|32171563|sp|Q8FYK3|RF1_BRUSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039960|sp|A9M8K5|RF1_BRUC2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23348737|gb|AAN30764.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161336598|gb|ABX62903.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|256000432|gb|ACU48831.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260157157|gb|EEW92237.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|260922790|gb|EEX89358.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261294142|gb|EEX97638.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261295581|gb|EEX99077.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261740773|gb|EEY28699.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261745334|gb|EEY33260.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
          Length = 359

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|262068281|ref|ZP_06027893.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
 gi|291378019|gb|EFE85537.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
          Length = 357

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 187/351 (53%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYEELNQILVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +  ++ L+  + ++    E  +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE+RK+K E +E  DGE  G+K     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
 gi|270506369|gb|ACZ84647.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
          Length = 350

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 176/345 (51%), Gaps = 8/345 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  +   + L  K  DP +  +  +A+   R    L   I+  +E++    D     
Sbjct: 1   MNLDELLSEYAELELKLADPTVHAHPAQARTFGRRYAELTPIITTYRELEGVQNDLDTAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA E  D +  +E  +   R+    +  +   +     D  D  +E+ AG GG ES  +
Sbjct: 61  ELASE--DEAFAEEAKELEGRVPELEDKLRHLLIPRDPNDDKDIIMEIKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +KTE ++    +  G K  T+ +K       +  LK E GVHR+
Sbjct: 119 AGDLLRMYLRYAERVGWKTELIDATHSDLGGYKDVTVALKARGDEGVWSRLKFEGGVHRV 178

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP   + +++++  +D RID YR+SG GGQ VNTTDSAV
Sbjct: 179 QRVPVTESQGRIHTSAAGVLVYPEA-EEVDVQVDPNDLRIDVYRSSGPGGQSVNTTDSAV 237

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITHIPTGVV  CQ E+SQ +NK  A  +LRA+L  +  ++    A     S+   +   
Sbjct: 238 RITHIPTGVVASCQNEKSQLQNKESAMRILRARLQAIAEEEANAAAMAERKSQIRTVDRS 297

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D R   +  +   VLDGDL   +++ L  +
Sbjct: 298 ERIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLTAVIQSLLDAE 341


>gi|94264416|ref|ZP_01288206.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93455173|gb|EAT05391.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 177/342 (51%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  +R   L  +  DP +  +    + L +E  H+        + +    D     +L
Sbjct: 5   LADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANGQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  IL+      + ++  +    +  +   +     D  +  LE+ AG GG E+ 
Sbjct: 65  LQEEDDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY+R+AE+  +K E L     E  G K    LI G + +  LK E GVHR+ 
Sbjct: 125 LFVANLFRMYSRYAEQLGWKVEVLSSSATEVGGYKEIIALISGDHVFSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +E+ I+ ++ + D +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPETETQGRVHTSAVTVAVLPEA-EEVELTINPAELKYDVFRSSGPGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++++   +    K+++G G  
Sbjct: 244 VTHLPTGLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R N+      DV+ G LD+ ++  
Sbjct: 302 SERIRTYNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPL 342


>gi|323463876|gb|ADX76029.1| peptide chain release factor 1 [Staphylococcus pseudintermedius
           ED99]
          Length = 358

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +    +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +  E D+   ++   +    +K EV    E  +   +     D  D  +E+   AGG
Sbjct: 61  IELMLAETDEADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE  +FK E +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEV-EDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG V+    E+SQ +N+ +A  +L+A+LY+++L  +EE        K+ +G
Sbjct: 240 SAVRITHIPTG-VIATSSEKSQIQNREKAMKVLKARLYDMKL--QEEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQ 346


>gi|319795450|ref|YP_004157090.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
 gi|315597913|gb|ADU38979.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
          Length = 362

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 178/343 (51%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  VQRL  L+       +  ++ + + + RE   +       +  + R  D     E+
Sbjct: 9   LERYVQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYRQREADIAGAKEM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  +E +     +    E  Q   L     D+ +A++E+ AG GG ES  +A
Sbjct: 69  LDDPDMAEMAREEIAGAEAELVQLEEELQRLLLPKDPDDARNAFMEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+ E+   + E +     E  G K   + I G   +G L+ E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYCERAGLRCEIVSESASELGGYKEVVIRIVGDEVFGKLRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+++ ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+V +CQ +RSQH+NKA+A  +L A++   E  + E  A      K  IG G    +
Sbjct: 249 IPTGIVAECQDDRSQHRNKAKALQVLSARI--QEKDRSERAAKDAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       +++GDL D ++A  A +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVLEALRAAR 348


>gi|194335257|ref|YP_002017051.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|238693362|sp|B4SAR5|RF1_PELPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194307734|gb|ACF42434.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 357

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  ++   L     DP+   + +  + L +E   L   +           +   
Sbjct: 1   MLDKLQSIKEKHLDLEQLLSDPNAAADQVRFRKLNKEYSDLREIVQAYDLYAATKTELDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             +L   E D  + +     +  ++ ++   +       L   EADS +  +E+ AG GG
Sbjct: 61  SRQLLKSESDAEMKELVQAEISELQKKLPELEQQLKILLLPKEEADSRNVIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE + ++ E L  ++     G +  TL + G + YG +K E G
Sbjct: 121 EEAALFAADLTRMYQRYAEHQGWQCETLHFNESSVPGGFREITLSVNGHDVYGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAVSVAVLPEA-EEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+PTG+V  CQ++RSQ +NK +A  MLR KLY+++L ++++       S    
Sbjct: 240 ETAVRITHMPTGIVSACQEQRSQLQNKERAMQMLRTKLYDIQLAEQQQQRADLRRSMVTT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R      +   +L GDL D + A 
Sbjct: 300 GDRSAKIRTYNY-PQSRVTDHRIAFTSHALPQILQGDLQDIINAL 343


>gi|313665080|ref|YP_004046951.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
 gi|312949513|gb|ADR24109.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
          Length = 363

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L     +VE+     +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDTELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+    +    G    
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGARSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 308 KIRTYNY-PQNRVTDHRIGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|227498082|ref|ZP_03928255.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
 gi|226832520|gb|EEH64903.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
          Length = 366

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 168/344 (48%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++    +  +  DP +  +    + L R    L   +S  +  Q    D    +ELA  
Sbjct: 15  LLEEYFGIEREMADPAISSDPGAMRRLGRRYAELGRVVSAYRAWQAAQADYDDAVELA-- 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D     E        +   E+ +   +     D+ D  +EV AG GG ES  +A+ L 
Sbjct: 73  EGDPDFAAEVPGLQAAAETATEHLREVLVPRDPDDARDVIIEVKAGEGGEESALFASDLA 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AE+  +  E L+  D +  G K   L +K           +  LK E GVHR+ 
Sbjct: 133 RMYTRYAERMGWAVEVLDATDSDLGGYKDVRLAVKARSAVEPQDGVWAHLKYEGGVHRVQ 192

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P VDD  E+EI  +D RID +R+SG GGQ VNTTDSAVR
Sbjct: 193 RVPVTESQGRIHTSAAGVLVMPEVDDPGELEIDPNDLRIDVFRSSGPGGQSVNTTDSAVR 252

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGR 310
           ITH+PTG+VV  Q E+SQ +NK  A  +LRA+L      +          S+   +    
Sbjct: 253 ITHLPTGIVVSMQNEKSQLQNKEAALRVLRARLLAERAAQAAAEEAEARRSQVRTVDRSE 312

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  + S VLDGDL   + + +A+ 
Sbjct: 313 RIRTYNF-PENRITDHRTGYKAYNLSTVLDGDLGPVIDSAIAMD 355


>gi|120612308|ref|YP_971986.1| peptide chain release factor 1 [Acidovorax citrulli AAC00-1]
 gi|166223521|sp|A1TTC4|RF1_ACIAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120590772|gb|ABM34212.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax
           citrulli AAC00-1]
          Length = 360

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/337 (32%), Positives = 174/337 (51%), Gaps = 3/337 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 9   LERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQVAGRYTRYRQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     +   +++E +    LL  + D + +A+LE+ AG GG ES  +A
Sbjct: 69  LDDPDMADMAREEIAAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A    +K E L   D E  G K   L ++G   YG L+ E G HR+ R+ 
Sbjct: 129 GDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIR 313
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R    A + +          +IR
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSERAAKEAALRKGLVGSGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+       +++GDL + ++A 
Sbjct: 309 TYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLEAL 344


>gi|265993634|ref|ZP_06106191.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764615|gb|EEZ10536.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 372

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDSYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 316

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++G+LD+ + A ++
Sbjct: 317 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALIS 358


>gi|150024963|ref|YP_001295789.1| peptide chain release factor 2 [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771504|emb|CAL42973.1| Peptide chain release factor 2 (RF-2) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 293

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 137/286 (47%), Positives = 201/286 (70%), Gaps = 2/286 (0%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  +   E +     QE     +     +E  + +++LS E D+  A L++ AGAG
Sbjct: 3   DELQLAYDFYKEGELSE--QELDQQYEATNTHIEGIELKNMLSDEGDALSAVLQITAGAG 60

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA ML+RMY  WA+ + +K + L    G+ AGIK+ TL I+G  ++G+LKGE G
Sbjct: 61  GTESCDWAEMLMRMYIMWAQNQGYKIKELNFQKGDAAGIKTVTLEIEGDYSFGYLKGENG 120

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIEI+ +D  I T R+SGAGGQ+VN  
Sbjct: 121 VHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEIITARSSGAGGQNVNKV 180

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++ V++TH PTG+ +QC + RSQH N+ +A  MLR++LYE+EL+K++E  N  E+ K +I
Sbjct: 181 ETKVQLTHKPTGIQIQCSETRSQHDNRNRAMQMLRSQLYEIELKKQQEQRNDIEAGKMKI 240

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIR+YV+QPY++VKD+RT  E +    V++G++D F+KA L 
Sbjct: 241 EWGSQIRNYVMQPYKLVKDVRTGHETSDVDSVMNGNIDAFLKAYLM 286


>gi|163789460|ref|ZP_02183899.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
 gi|159875314|gb|EDP69379.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
          Length = 358

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++   R   LN    DP +  +      L +E   +   ++  +  ++   D   
Sbjct: 1   MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVEQDISD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             ++  E+ D  + +   + L  +K E    +       L   E D  +  +E+   AGG
Sbjct: 61  TEDMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKVLMLPKDENDDRNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L  MY ++A+ + +KTE L+ +     G K  TL+I G N Y  LK E G 
Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWKTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+++ + D R D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMPEA-EEVELDLPDKDIRTDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEI 306
           SAVR+TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+ ++   + E     +S+    
Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQAAQSEYDAERKSAIGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 300 DRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDALVLNEQ 347


>gi|58337080|ref|YP_193665.1| peptide chain release factor 1 [Lactobacillus acidophilus NCFM]
 gi|227903648|ref|ZP_04021453.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
 gi|75432974|sp|Q5FKZ0|RF1_LACAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58254397|gb|AAV42634.1| peptide chain release factor I [Lactobacillus acidophilus NCFM]
 gi|227868535|gb|EEJ75956.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
          Length = 361

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 97/345 (28%), Positives = 170/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LESLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKENKKEIEDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISNETDSDLIEMAKEENAELEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +    ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q + +     +++        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAQYDAKRKNAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIIDALILYNQ 350


>gi|62290730|ref|YP_222523.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941]
 gi|82700642|ref|YP_415216.1| peptide chain release factor 1 [Brucella melitensis biovar Abortus
           2308]
 gi|189024940|ref|YP_001935708.1| peptide chain release factor 1 [Brucella abortus S19]
 gi|254694507|ref|ZP_05156335.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|254696132|ref|ZP_05157960.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254707598|ref|ZP_05169426.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|256258272|ref|ZP_05463808.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|260545992|ref|ZP_05821732.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260760500|ref|ZP_05872843.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261214824|ref|ZP_05929105.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261315085|ref|ZP_05954282.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|75496230|sp|Q57B22|RF1_BRUAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361513|sp|Q2YLN8|RF1_BRUA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689404|sp|B2S825|RF1_BRUA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62196862|gb|AAX75162.1| PrfA, peptide chain release factor 1 [Brucella abortus bv. 1 str.
           9-941]
 gi|82616743|emb|CAJ11828.1| Class I peptide chain release factor domain:Peptide chain release
           factor 1:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189020512|gb|ACD73234.1| Class I peptide chain release factor domain protein [Brucella
           abortus S19]
 gi|260096099|gb|EEW79975.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260670932|gb|EEX57753.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260916431|gb|EEX83292.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261304111|gb|EEY07608.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
          Length = 359

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
 gi|258555537|gb|ACV78479.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
          Length = 361

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V     L  K  DP +  +   ++ L R    L   ++  +++     D     EL
Sbjct: 9   VDALVAEYEDLQVKLSDPAVHADQAVSRKLGRRYAELTPIVTTARDLAATRGDLQAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             E+   +   E +  L     E+E +  E L      D  D  +EV AG GG ES  +A
Sbjct: 69  GAED---AGFAEEARTLAGRVDELEQRLSELLAPRDPDDGKDVLVEVKAGEGGEESALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGVHR 189
             LLRMY R+AE+R +KTE L   + +  G K  T+ +K P       +  LK E GVHR
Sbjct: 126 GDLLRMYLRYAERRGWKTEVLSATESDLGGYKDVTVAVKSPAATPDGVWARLKFEGGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + ++V P V+D  ++EI+++D RID +R+SG GGQ VNTTDSA
Sbjct: 186 VQRVPVTESQGRVHTSAAGVFVAPEVEDVNDVEIADADLRIDVFRSSGPGGQSVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ E+SQ +NK QA  +LRA++        +  A     S+   +  
Sbjct: 246 VRITHLPTGIVVSCQNEKSQLQNKEQAMRILRARMLAAARATADAAAADARRSQVRTVDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++R+Y   P   + D R   +  +   VLDGDLD  + A  A  +
Sbjct: 306 SERVRTYNY-PENRIADHRVGYKAYNLDAVLDGDLDAVLDALSAADR 351


>gi|256850891|ref|ZP_05556280.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260661105|ref|ZP_05862019.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|282934197|ref|ZP_06339475.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297205768|ref|ZP_06923163.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
 gi|256615953|gb|EEU21141.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260548042|gb|EEX24018.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|281301811|gb|EFA94077.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297148894|gb|EFH29192.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
          Length = 362

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 171/343 (49%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +     DP +  +      + +E   +   +   ++ Q+         E+
Sbjct: 8   LEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV       +   L     D  D  +E+   AGG E+ 
Sbjct: 68  IENESDEDLVEMAKEENSDLEKEVAELEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    + +  A+  E  K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDY--YESQNQASYDEKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       +++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346


>gi|295394649|ref|ZP_06804868.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972542|gb|EFG48398.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 359

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 123/335 (36%), Positives = 181/335 (54%), Gaps = 6/335 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + +     +  +  +P +  N   A+ L R    LD      +E+   L D     ELA 
Sbjct: 14  SLLDEHERIEAELANPDVHANAGLARKLTRRYSELDQIAKTYRELNQCLSDVEDAKELAS 73

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E  D +  +E     +RI++  +  +   +     D+ DA +EV AG GG ES  +A  L
Sbjct: 74  E--DPAFAEEAKSLEERIEVLQDKLRELLIPKDPDDARDAIIEVKAGEGGDESALFAGDL 131

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP--NAYGWLKGEQGVHRLVRISP 195
           +RMY RWA+ R + TE L+  +    G K  T+ IK      YGWLK E GVHR+ R+  
Sbjct: 132 VRMYQRWADHRGWSTEVLDSTEANLGGYKDITIAIKSREGGVYGWLKFEGGVHRVQRVPV 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS + + V+P VD+  EI++ ++D +ID YR+SG GGQ VNTTDSAVRITH+
Sbjct: 192 TESQGRIHTSAAGVLVFPEVDEPEEIQLDDNDLKIDVYRSSGPGGQSVNTTDSAVRITHL 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRS 314
           PTG+V  CQ E+SQ +NK  A  MLRA++   + ++    AN    S+   +    +IR+
Sbjct: 252 PTGIVASCQNEKSQLQNKEAAMRMLRARILAKQAEEAAAEANDMRRSQVRTVDRSERIRT 311

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           Y   P   + D RT  +  +   VLDG LDD +++
Sbjct: 312 YNF-PENRIVDHRTGFKAYNLDQVLDGRLDDVVES 345


>gi|254731050|ref|ZP_05189628.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
          Length = 351

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 2   DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 57

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 58  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 118 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 177

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 178 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 236

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 237 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 295

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 296 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 337


>gi|291460253|ref|ZP_06599643.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291417200|gb|EFE90919.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 360

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 179/345 (51%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +    L      P L  ++   + L+RE+  L+         +         LEL
Sbjct: 7   LEEVRRHYEELMLSLTRPELSNDIARYRKLIREQSELEPLYKTYLAFRKAEESERDALEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +L+   + LQ  K E     E  +   L   E D  +  +E+  GAGG E+ 
Sbjct: 67  LQKEKDPELLEMAKEELQNAKEEQSLLGEKLRLLLLPKDENDDKNIVMEIRGGAGGEEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +AE+R F+TE +  H+    G+K    ++ G  AY  LK E GVHR+ 
Sbjct: 127 LFAAELYRMYMSYAERRGFRTELVSFHETGLGGLKEVIFIVDGQGAYSRLKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI  SD R++ +R+SGAGGQH+N T SAVR
Sbjct: 187 RVPETESGGRIHTSTATVAVMPEAGE-VEVEIKPSDVRMEVFRSSGAGGQHINKTSSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           + HIP+G+V +CQ+ERSQ +N+ +A  +LRA+LYE+E +KR EE A    S         
Sbjct: 246 LIHIPSGMVAECQEERSQLQNREKAMRLLRARLYEIESRKRHEESAAEKRSQLGTGERSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +      ++L GDLD  +   +  ++
Sbjct: 306 KIRTYNF-PQGRVTDHRIKLSLYCLEEILGGDLDPLIDPLITAEQ 349


>gi|150025963|ref|YP_001296789.1| peptide chain release factor 1 [Flavobacterium psychrophilum
           JIP02/86]
 gi|166223557|sp|A6H0W3|RF1_FLAPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149772504|emb|CAL43987.1| Peptide chain release factor 1 (RF-1) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 357

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 177/344 (51%), Gaps = 8/344 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      Q+   ++     P +  +      L +E + L + +    E    + +   
Sbjct: 1   MLDRLQIIKQKFDEISDLIIQPDVIADQKRYVALNQEYKGLKSLVEKRDEYVILMANIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L+  K  +    E  +F  +     D+ +  +E+ AG GG
Sbjct: 61  ANEIIADGSDADMVEMAKMQLEEAKERLPELEEEIKFLLIPKDAEDAKNVMVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E R ++T  +++++G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCENRGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  +++I  +D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEA-EEFDVQIDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LYE EL K++    +  +S+   G
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKAFGVLRSRLYEQELAKKQADDAVKRTSQVSSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y       V D R  ++      V++G +  F+   
Sbjct: 300 DRSAKIRTYNYS-QGRVTDHRIGLDVFDMDGVMNGKIQKFVDEL 342


>gi|327404087|ref|YP_004344925.1| peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM
           16823]
 gi|327319595|gb|AEA44087.1| bacterial peptide chain release factor 1 (bRF-1) [Fluviicola
           taffensis DSM 16823]
          Length = 359

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +     DP +  ++     L +E + L+   +  K  ++ L +     E+
Sbjct: 8   LEAIHFRFIEVGKMITDPEIISDMERYVKLNKEYRDLEEVDAAYKSYKNVLDNLKSSKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE--VEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     +  ++ +  +  ++ + LL      D  +A +E+ AG GG E+ 
Sbjct: 68  LEVETDPEMREMAKMEINELEQQRPIIEEEIKVLLIPKDPEDDKNAIIELRAGTGGDEAC 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + ++  +  E +   +G   G K  ++ I G   YG LK E GVHR+ 
Sbjct: 128 IFVEDIYRMYTMYFKEMGWAYEIVNSSEGSAKGYKEVSMSISGAGIYGMLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + ++ E+  +D R DT+RASGAGGQH+N T+SA+R
Sbjct: 188 RVPETESQGRVHTSAITVAVLPEA-EEVDFELDMNDVRKDTFRASGAGGQHINKTESAIR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           +THIPTG VV+CQ  RSQHKN AQA ++LR++LY+ EL +  +E A   ++  +      
Sbjct: 247 LTHIPTGTVVECQDGRSQHKNLAQAISVLRSRLYQAELDRVHQERAAHRKTLVSTGDRSA 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N    + S  ++GD+ + + A    +
Sbjct: 307 KIRTYNY-PQGRITDHRINKTIYNLSAFMNGDVQEMIDALKMAE 349


>gi|254302818|ref|ZP_04970176.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323010|gb|EDK88260.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 357

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 184/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVTRYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDSEMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|220918000|ref|YP_002493304.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955854|gb|ACL66238.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 309

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 153/292 (52%), Positives = 206/292 (70%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +E
Sbjct: 7   AVRRALDDAQALCELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVE 66

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGW
Sbjct: 67  VKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGW 126

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGG
Sbjct: 127 LKAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGG 186

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VN TDSAVR+TH+PTG+VV  Q ERSQ KN++ AW +LRAKLY+LE +KR    +  E
Sbjct: 187 QKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAE 246

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + K +I +G QIRSYVLQPYQMVKDLRT +E     DVLDGDLD F++  L 
Sbjct: 247 ALKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298


>gi|258512739|ref|YP_003186173.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479465|gb|ACV59784.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 356

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 175/345 (50%), Gaps = 8/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L+     P +  +  + +   +E+  L   +   +E +    +   
Sbjct: 1   MFDRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  + +     L  ++   E  +       L     D  D ++E+ A AGG
Sbjct: 61  AKAMLQDKLDDEMREFVRAELAELQRRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY R+AEK  +KTE ++    +  G +   + + G  AY  LK E G 
Sbjct: 121 EEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS ++        + +E+EI E D RIDT+ ++G GGQ VNTT 
Sbjct: 181 HRVQRVPVTESGGRIHTSTAT-VAVLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEI 306
           SAVRITH+PTG+VV CQ E+SQ KNK +A  +LRA+LYE  + +++EE+A          
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEELAAKRRLQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R  +       VLDG+LD+ ++A +
Sbjct: 300 DRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQALI 343


>gi|163843895|ref|YP_001628299.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
 gi|189039961|sp|B0CIC3|RF1_BRUSI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163674618|gb|ABY38729.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
          Length = 359

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIITTVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|269114934|ref|YP_003302697.1| Peptide chain release factor 1 [Mycoplasma hominis]
 gi|268322559|emb|CAX37294.1| Peptide chain release factor 1 [Mycoplasma hominis ATCC 23114]
          Length = 359

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 180/344 (52%), Gaps = 6/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   +   L  K  DP+++ ++     + +E+  L       K+ Q+      +  E+
Sbjct: 9   LLSIKNQYDELTEKLNDPNIYNDIKAYTRIAKEKSELQEIYDAFKKYQNIEELYFLSKEI 68

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +++     +++   E  +   L   E D  D  +E+   AGG E+ 
Sbjct: 69  LTNEKDQELIELAKNDIDNQMNQLQEIEEEIKELLLPQDENDKRDVIMEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY ++AE + FK + ++   G   G       IKG   +  LK E+GVHR+ 
Sbjct: 129 IFSGDLFKMYQKYAEIKGFKIKIIDSTYGAAGGYSQIVFSIKGEKVFSQLKFERGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P VD+ ++IEI   D  ++ +R+SGAGGQ VNTTDSAVR
Sbjct: 189 RVPATETQGRVHTSTATVTVLPEVDEDVKIEIRPEDIEVNVFRSSGAGGQSVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH PTG+VV  Q ERSQ +NK  A  +L+++LYELEL+KREE  +             +
Sbjct: 249 ITHKPTGLVVTSQDERSQIQNKETALKVLKSRLYELELRKREEAESGLRKLAGTGDRSEK 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R     +    V++G+LD  ++A +A +K
Sbjct: 309 IRTYNY-PQDRITDHRIGFSTS-LKVVMEGELDKIIEALIADEK 350


>gi|171779352|ref|ZP_02920316.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281969|gb|EDT47400.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 359

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIEDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKDSKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILFDQ 350


>gi|294782570|ref|ZP_06747896.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
 gi|294481211|gb|EFG28986.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
          Length = 357

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 187/351 (53%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +  ++ L+  + ++    E  +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDADMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE+RK+K E +E  DGE  G+K     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|294055591|ref|YP_003549249.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614924|gb|ADE55079.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
          Length = 362

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 17/351 (4%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRL 66
           +  + D      +L+ L+ +  DP+ + +   A  + RE Q +   I   +     Q ++
Sbjct: 1   MAKIPDIAPFRDKLADLDAQMADPNFYSDQRRAAEVSREHQRVSGLIERFEAFHSAQTQI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVH 122
            +N  +  +A    +  + +  ++ ++ +K ++E  + + L         DS ++ +E+ 
Sbjct: 61  VENEAM--MADSSVEEELREMAAEEVEELKGQIETLEKDVLRAMVPPDATDSRNSVMEIR 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGG E+  +A  L RMYTR+AE + ++ E +     E  G +     I G +AY  LK
Sbjct: 119 GGAGGDEANIFAGDLYRMYTRYAEAKGWRVEVMSTSPAETGGYREIIFNISGEDAYKHLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   ++  R HTS +++ V P   + ++IEI+  D  I T RASGAGGQH
Sbjct: 179 FESGVHRVQRVPVTETQGRIHTSTATVAVLPEA-EEVDIEINPQDLEISTMRASGAGGQH 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAV + H PTGV V C  ERSQ KN+A+A  ++R++L + ++   EE A      
Sbjct: 238 VNTTDSAVMMVHKPTGVTVYCADERSQIKNRAKALTVMRSRLLQAKVD--EENAKYAAER 295

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           K +IG G    +IR+Y   P   + D R  +  +    V+DG LDD + A 
Sbjct: 296 KGQIGTGDRSERIRTYNY-PQGRLTDHRIGMNLS-LPSVIDGALDDLIDAL 344


>gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1]
          Length = 358

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 121/345 (35%), Positives = 179/345 (51%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP +  + ++A+ L +    L   +   +++     D     EL
Sbjct: 6   VDSLLDEYAELEQRLADPEVLADQVQARKLGKRYAQLGPVVRCARDLAQAREDRDAAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D S   E      R+           +     DS+D  +EV +G GG ES  +A 
Sbjct: 66  ASE--DRSFAAEADALDVRVVELETELAELLVPRDPHDSDDVLMEVKSGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP----NAYGWLKGEQGVHRLV 191
            L+RMYTR+AE R +K E L     +  G K  TL ++       A+  LK E GVHR+ 
Sbjct: 124 DLVRMYTRYAESRGWKVELLGSTPSDLGGFKDVTLSVRSKDPAQGAWAALKFEGGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V+P  D++ ++EI E D R+D +RASG GGQ VNTTDSAVR
Sbjct: 184 RVPVTESQGRIHTSAAGVLVFPDADETPDVEIDEKDIRVDVFRASGHGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGR 310
           ITH+P+G+VV CQ ERSQ +NKA+A ++LRA+L      +  E A+    S+   +    
Sbjct: 244 ITHLPSGIVVSCQNERSQLQNKARAMDVLRARLQAKAEAEAAEAASEQRRSQVRTVDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R   +  + S VLDG+L D   A  A  +
Sbjct: 304 RIRTYNF-PENRISDHRVGFKAHNLSSVLDGNLTDVFAALTAADR 347


>gi|187734557|ref|YP_001876669.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|238691860|sp|B2UL99|RF1_AKKM8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187424609|gb|ACD03888.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 358

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 177/346 (51%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L T   +P  + +  +A  +MRE + L   +     +           EL
Sbjct: 7   IEKRRQRLEELETVIAEPDFFNDQKKASEIMREHRRLKELMETWDSLNATEQQLADNQEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A   DD  + +  +  +  ++  +E      Q+  L     +  DA +E+ AG GG E+ 
Sbjct: 67  AK-TDDPELAELAALEIPELEAALEKLRSDVQYSLLPRDTTEDRDAIIEIRAGTGGDEAS 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+R ++ E LE    +  G K     I G   + +LK E GVHR+ 
Sbjct: 126 LFAGDLLRMYQRFAEERGWRFEHLESSPSDVGGFKEVVCRIAGEEVFRFLKYEGGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++IEI   D RI+  R+ GAGGQHVN T+SAV+
Sbjct: 186 RVPATETQGRIHTSTATVAVMPEA-EEVDIEIRPEDLRIEVCRSGGAGGQHVNKTESAVQ 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I HIPTGV V+C++ERSQ KN+ +   +LRAKL+E +  KREE      + +  IG G  
Sbjct: 245 IWHIPTGVYVRCEEERSQMKNREKGMKILRAKLFEAK--KREEAEKYSAARRNLIGSGGR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D R      +   +L G L+D + A    +
Sbjct: 303 EEKIRTYNF-PQNRLTDHRIGYTSHNLDGILMGQLEDLIMALQHAE 347


>gi|19704667|ref|NP_604229.1| peptide chain release factor 1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22096034|sp|Q8R5W0|RF1_FUSNN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19714975|gb|AAL95528.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 365

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 119/352 (33%), Positives = 184/352 (52%), Gaps = 11/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D  
Sbjct: 8   KMFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIE 67

Query: 71  ILLELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            + E    E D  + +       +  +++    E  +   L   + D  +  +E+  GAG
Sbjct: 68  FIKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAG 127

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE++K+K E +E  DGE  G+K     I G  AY  LK E G
Sbjct: 128 GDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEIAFTIIGLGAYSRLKFESG 187

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN T
Sbjct: 188 VHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAGGQHVNMT 247

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+   + +    + ++
Sbjct: 248 DSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQR--SEVESERRLQV 305

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 306 GTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 356


>gi|265999301|ref|ZP_05465736.2| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|17982074|gb|AAL51373.1| bacterial peptide chain release factor 1 (rf-1) [Brucella
           melitensis bv. 1 str. 16M]
 gi|263093126|gb|EEZ17261.1| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|326409872|gb|ADZ66937.1| peptide chain release factor 1 [Brucella melitensis M28]
 gi|326539585|gb|ADZ87800.1| peptide chain release factor 1 [Brucella melitensis M5-90]
          Length = 377

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++G+LD+ + A ++
Sbjct: 322 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALIS 363


>gi|83319336|ref|YP_424135.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|90110051|sp|P71496|RF1_MYCCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83283222|gb|ABC01154.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 363

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L     +VE+     +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+    +    G    
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGARSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 308 KIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|158312864|ref|YP_001505372.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
 gi|238686837|sp|A8L3V1|RF1_FRASN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158108269|gb|ABW10466.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
          Length = 356

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 173/343 (50%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + +  +  DP +  +   A+ L R    L   +   + ++    D     E 
Sbjct: 5   LAGMIAEHADIEKRLADPDIHNDPARARELTRRYAELATPVDLAQRLERVEGDLETAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  E D S   E               +   +     DS DA LEV AGAGG ES  +A 
Sbjct: 65  A--EQDPSFRDEVVALEASQADLAARLRAYLVPVDPDDSRDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+R ++T+ L+ +  +  G +  ++ +K       G   +G L+ E GVH
Sbjct: 123 DLLRMYLRYAERRGWRTQILDANPSDLGGYRDVSVAVKSRGTAAPGQGVFGRLRFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   D ++IE+  +D RID +R+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLPEAAD-VDIEVDPNDLRIDVFRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L     +K E  A    +S+   + 
Sbjct: 242 AVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAAAREKAETAAAAARASQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              ++R+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 302 RSEKVRTYNF-PENRISDHRIGYKAHNLEAVLDGDLDAVIEAL 343


>gi|216264821|ref|ZP_03436813.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226320754|ref|ZP_03796310.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
 gi|215981294|gb|EEC22101.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226233809|gb|EEH32534.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
          Length = 269

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 138/266 (51%), Positives = 186/266 (69%), Gaps = 1/266 (0%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                 ++ + +     S    E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE++
Sbjct: 2   EIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAERK 61

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+S
Sbjct: 62  KYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFAS 120

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +RS
Sbjct: 121 VFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRS 180

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD RT
Sbjct: 181 QHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRT 240

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
             E ++ + V+DG++D+F++  L  K
Sbjct: 241 KFENSNTTSVMDGNIDNFIEEYLKWK 266


>gi|218289204|ref|ZP_03493439.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240552|gb|EED07732.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 356

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 175/345 (50%), Gaps = 8/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L+     P +  +  + +   +E+  L   +   +E +    +   
Sbjct: 1   MFDRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  + +     L  ++   E  +       L     D  D ++E+ A AGG
Sbjct: 61  AKAMLQDKLDDEMREFVKAELAELQPRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY R+AEK  +KTE ++    +  G +   + + G  AY  LK E G 
Sbjct: 121 EEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS ++        + +E+EI E D RIDT+ ++G GGQ VNTT 
Sbjct: 181 HRVQRVPITESGGRIHTSTAT-VAVLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEI 306
           SAVRITH+PTG+VV CQ E+SQ KNK +A  +LRA+LYE  + +++EE+A          
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEELAAKRRLQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R  +       VLDG+LD+ ++A +
Sbjct: 300 DRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQALI 343


>gi|313886402|ref|ZP_07820124.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924148|gb|EFR34935.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 368

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 170/355 (47%), Gaps = 20/355 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            +  V R   L T   DP++  +      L +E  HL   +      K++  +  +    
Sbjct: 8   VEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAEST 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L+ A  + D  +     + L   K E+    E  +   L +   D  +A LE+ AG GG 
Sbjct: 68  LQDA--DSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+ E + +        +G   G K   L + G   YG LK E GVH
Sbjct: 126 EAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   D  E+ I+E + + DT+R+SGAGGQ+VN  +S
Sbjct: 186 RVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDTFRSSGAGGQNVNKVES 244

Query: 249 AVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIG 299
            VR+ +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  +EIA+  
Sbjct: 245 GVRLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDEIASRR 304

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++  +      +IR+Y   P   V D R  +   +   VL GDL   + A +  +
Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358


>gi|153008371|ref|YP_001369586.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
 gi|166223580|sp|A6WXQ3|RF1_OCHA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151560259|gb|ABS13757.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
          Length = 357

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 184/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L   +  I+E+ D   + + L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSETYVKLASEYSELQEVVGKIRELTDSRKEAVDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +E  + E     L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALALEELPGVEKRIEGLEQEVQILLLPKDAADEKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK +   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKADTERSESRRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|257439051|ref|ZP_05614806.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
 gi|257198541|gb|EEU96825.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
          Length = 356

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 184/347 (53%), Gaps = 12/347 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILL 73
           +    R   L+ +   P    +    + LM+E    +  +   + +   QD L     LL
Sbjct: 2   EAVSHRFEELSIRLNQPETAADPALFRRLMQEYHEAEPVVQAYQALTTAQDHLAQAKALL 61

Query: 74  E-LALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           E   L+ D   ++Q+      +   ++E   +   L     D     +E+  GAGG E+ 
Sbjct: 62  EGETLDPDFKEMVQQEIGEKSQEVAQLENNLKILLLPKDVNDDKSVIMELRGGAGGEEAA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L+RMYT + + R ++ E L +++ E  G+K A L + G  AY  LK E GVHR+ 
Sbjct: 122 LFAHSLMRMYTMYVQSRGWELEVLNLNETELGGVKEAILAVNGAGAYNRLKYESGVHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++ I   D RIDT+R+SGAGGQH+N T SA+R
Sbjct: 182 RVPETETQGRIHTSTATVAVMPQA-EEVDLVIDPKDLRIDTFRSSGAGGQHINKTSSAIR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I  +   ++G G  
Sbjct: 241 VTHIPTGMVVECQNERSQFQNKDKALEVLRSRL--LAQKQKEQQDAINANRAGQVGTGDR 298

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P     D R  +   +   ++DG+LD+ + A    ++
Sbjct: 299 SEKIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGNLDEIIDALATHEQ 344


>gi|111225294|ref|YP_716088.1| peptide chain release factor 1 [Frankia alni ACN14a]
 gi|111152826|emb|CAJ64570.1| peptide chain release factor RF-1 [Frankia alni ACN14a]
          Length = 362

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 179/338 (52%), Gaps = 11/338 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V   + +  +  DP +  +  +A+ L R    L   +   +E++    +  +    
Sbjct: 11  LDGLVAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELERV--EGDLAAAR 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            L  +D S   E  D    +    E  +   +     D+ DA LEV AGAGG ES  +A 
Sbjct: 69  ELAAEDTSFRGEVDDLDVELAGLNERLRAYLVPVDPDDARDAILEVKAGAGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK------GPNAYGWLKGEQGVHR 189
            LLRMY R+AE+R +KTE L+ +  +  G +  ++ +K      G   YG L+ E GVHR
Sbjct: 129 DLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGSAAGDGVYGRLRFEGGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V P   + +++EI  +D RID +R+SG GGQ VNTTDSA
Sbjct: 189 VQRVPVTESAGRIHTSAAGVLVLPEA-EEVDVEIDPNDLRIDVFRSSGPGGQSVNTTDSA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ E+SQ +NK  A  +LRA+L  +  +K E  A++  +S+   +  
Sbjct: 248 VRITHVPTGLVVSCQNEKSQLQNKESALRILRARLLGVAREKAEAEASLARASQVRTVDR 307

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
             ++R+Y       + D R   +  +   VLDG+LD+ 
Sbjct: 308 SERVRTYNFAE-NRISDHRVGYKAHNLDQVLDGELDEV 344


>gi|15618037|ref|NP_224321.1| peptide chain release factor 1 [Chlamydophila pneumoniae CWL029]
 gi|15835649|ref|NP_300173.1| peptide chain release factor 1 [Chlamydophila pneumoniae J138]
 gi|16752931|ref|NP_445202.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|33241449|ref|NP_876390.1| peptide chain release factor 1 [Chlamydophila pneumoniae TW-183]
 gi|6225941|sp|Q9Z968|RF1_CHLPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4376376|gb|AAD18266.1| Peptide Chain Releasing Factor [Chlamydophila pneumoniae CWL029]
 gi|7189573|gb|AAF38472.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|8978487|dbj|BAA98324.1| peptide chain releasing factor [Chlamydophila pneumoniae J138]
 gi|33235957|gb|AAP98047.1| translation releasing factor RF-1 [Chlamydophila pneumoniae TW-183]
 gi|269302994|gb|ACZ33094.1| peptide chain release factor 1 [Chlamydophila pneumoniae LPCoLN]
          Length = 357

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 120/340 (35%), Positives = 181/340 (53%), Gaps = 9/340 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ---HLDNAISFIKEIQDRLCDNLILLELA 76
           + RL+ +  K  +P ++ N  E   L +E      L NA   I  ++  L D+   L + 
Sbjct: 9   LNRLAEVEIKISNPEIFSNSKEYSALSKEHSYLLELKNAYDKILNLEKVLADDKQALAIE 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
            + +   +L+E  +   +++LE   K  ESLL      D  +  +E+ AG GG E+  + 
Sbjct: 69  KDPEMVVMLEEGINE-NKVELEKLNKILESLLVPPDPDDDLNVIMELRAGTGGEEAALFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
              +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+ 
Sbjct: 128 GDCVRMYHLYASSKGWKYEVLSASESDLKGYKEYVMGISGTGVKRLLQYEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
             ++  R HTS  +I V P   +   E+ I+E D +IDT+RASGAGGQHVN TDSAVRIT
Sbjct: 188 ETETQGRVHTSAITIAVLPEPSEEDTELLINEKDLKIDTFRASGAGGQHVNVTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTGVVV CQ ERSQHKNK +A  +L+A++ + E+QKR   A+   S++   G    +I
Sbjct: 248 HLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRHNEASAMRSAQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y       V D R  +   +   V++GDLD    A ++
Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDPITTAMVS 346


>gi|15834912|ref|NP_296671.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270285082|ref|ZP_06194476.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270289105|ref|ZP_06195407.1| peptide chain release factor 1 [Chlamydia muridarum Weiss]
 gi|301336478|ref|ZP_07224680.1| peptide chain release factor 1 [Chlamydia muridarum MopnTet14]
 gi|13878666|sp|Q9PL16|RF1_CHLMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7190335|gb|AAF39160.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
          Length = 359

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 183/342 (53%), Gaps = 13/342 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL---DNAISFIKEIQDRLCDNLILLELA 76
           ++RL  +     DP+++ N  E   L +E   L    NA   I   +  L D+ + L   
Sbjct: 9   LRRLEEVEKLISDPNIFSNPKEYSSLSKEHARLSEIKNAHESILAAKKILHDDKLAL--- 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
             E D  ++    + +Q  +  +E   KQ E+LL      D     +E+ AG GG E+  
Sbjct: 66  STEKDPEMIAMLEEGIQGGEESLERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A  + ++ E L   + +  G K   + + G +   +L+ E G HR+ R
Sbjct: 126 FVGDCVRMYHLYASIKGWQCEVLSASESDLGGYKEYIMGVSGTSVKRFLQYEAGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   ++  R HTS  +I V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVR
Sbjct: 186 VPETETQGRVHTSAVTIAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV CQ ERSQHKNKA+A  +L+A++ + E+QKRE+ A+   S++   G    
Sbjct: 246 ITHIPTGVVVSCQDERSQHKNKAKAMRVLKARIRDAEVQKREQEASAMRSAQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R  +   +   V+ G+LD    A ++
Sbjct: 306 RIRTYNF-PQNRVTDHRIGLTLYNLDRVMQGELDMITTALVS 346


>gi|255348385|ref|ZP_05380392.1| peptide chain release factor 1 [Chlamydia trachomatis 70]
 gi|255502926|ref|ZP_05381316.1| peptide chain release factor 1 [Chlamydia trachomatis 70s]
 gi|255506595|ref|ZP_05382234.1| peptide chain release factor 1 [Chlamydia trachomatis D(s)2923]
 gi|289525068|emb|CBJ14538.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           Sweden2]
 gi|296434608|gb|ADH16786.1| peptide chain release factor 1 [Chlamydia trachomatis E/150]
 gi|296438326|gb|ADH20479.1| peptide chain release factor 1 [Chlamydia trachomatis E/11023]
          Length = 359

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 183/342 (53%), Gaps = 13/342 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    +  + +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLAL--- 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
             E D  I+    + +   +  VE+  KQ E+LL      D     +E+ AG GG E+  
Sbjct: 66  STEKDPEIVAMLEEGVLVGEEAVEHLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R
Sbjct: 126 FVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVR
Sbjct: 186 VPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S++   G    
Sbjct: 246 ITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R  +   +   V++G+LD    A + 
Sbjct: 306 RIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTALVT 346


>gi|189499090|ref|YP_001958560.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
 gi|189494531|gb|ACE03079.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
          Length = 357

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 173/341 (50%), Gaps = 8/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L  +  DP +  +    + L +E   L   +      +        + ++
Sbjct: 5   LEALKDKYLRLEEQLSDPEIIADQKRFRKLNKEYSDLKEIVQGYDRYKSNKVQIEEVRKM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +       L+ ++        +         EADS +  +E+ AG GG E+ 
Sbjct: 65  LKQETDPEMKSLALVELEELQELQPELDQQLKLLLLPKEEADSRNVIIEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  LLRMY ++AE++ +K + +E ++    G  K A L I G + Y  +K E GVHR+
Sbjct: 125 LFATDLLRMYQKFAERKGWKCDMMEFNEASIPGACKEAILSISGHDVYATMKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   + ++IEI + D ++DT+R+ G GGQ+VN  ++AV
Sbjct: 185 QRVPETETQGRIHTSAASVAVLPEA-EDVDIEIRKDDLQLDTFRSGGKGGQNVNKVETAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH P+G+VV CQ+ERSQ +N+ +A  MLRAKLY+ +L ++         S    G   
Sbjct: 244 RITHTPSGIVVACQEERSQLQNRERAMKMLRAKLYDQQLAEKNRERADLRRSMVTTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R      +   +L+G+LDD ++A 
Sbjct: 304 AKIRTYNF-PQSRVTDHRIGYTSHALPQILEGNLDDIIEAL 343


>gi|261323819|ref|ZP_05963016.1| peptide chain release factor 1 [Brucella neotomae 5K33]
 gi|261299799|gb|EEY03296.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 372

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   +  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDVAAM 78

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 316

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 317 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 358


>gi|313886616|ref|ZP_07820328.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923912|gb|EFR34709.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 328

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 195/320 (60%), Gaps = 11/320 (3%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
            A+  MR    + + I   + +     +  +  +   EE      Q+  D   R    VE
Sbjct: 3   RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYKEEAVEE--QDVDDAYARAIKLVE 60

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             +  ++LS E D   A L+++AGAGGTESQDWA+ML+RMY RWAE+  +K       DG
Sbjct: 61  DLELRNMLSAEEDRLGAVLKINAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDG 120

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           ++AGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE
Sbjct: 121 DDAGIKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIE 180

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT--------GVVVQCQQERSQHKN 272
           +E++      DT+R+SGAGGQ+VN  ++ VR+ +  T         +V++  + RSQ  N
Sbjct: 181 VEVNPGLLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDN 240

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A  +LR++LY+ EL++R    +  E++K +I WG QIRSYV    + VKD RT  + 
Sbjct: 241 RENALRLLRSQLYDKELERRRAAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQT 299

Query: 333 TSPSDVLDGDLDDFMKATLA 352
           +  + V+DGDLD F+KA L 
Sbjct: 300 SDVNGVMDGDLDAFIKAYLM 319


>gi|169838345|ref|ZP_02871533.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7a]
          Length = 243

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 144/241 (59%), Positives = 183/241 (75%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+A L +++GAGGTE+ DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IKG
Sbjct: 2   NNAILTINSGAGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYG+LKGE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D ++I+I   D ++DTYR
Sbjct: 62  NYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVKIDIRPEDLKVDTYR 121

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVNTTDSAVRITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE+
Sbjct: 122 ASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREK 181

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                + ++++I WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   
Sbjct: 182 EMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYA 241

Query: 355 K 355
           K
Sbjct: 242 K 242


>gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
 gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
          Length = 361

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 180/341 (52%), Gaps = 8/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N   RL  LN    +P +  N  + + L +E   +   +    + +         +E+
Sbjct: 9   LENLSDRLQELNVLLTEPEIINNQNQFRSLSKEYAEIQPIVECFDKYRQNSETQATAIEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +     + L + + E E    E           D+++ +LEV AG GG E+ 
Sbjct: 69  LRDE-DADMRALAEEELSQAQTENERLDNELQLLLLPKDPDDNSNTFLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY+R+AE++ ++ E L  + GE  G K   + I G   Y   K E G HR+ 
Sbjct: 128 LFAGDLVRMYSRYAEQQNWQIEILSQNHGEHGGFKEIIMRITGEGVYSRFKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P V++  EIEI+ +D R DT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAIMPEVEEVEEIEINNADIREDTFRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+V++CQ ERSQHKN+A+A ++L+A+L   E +++         +    G    
Sbjct: 248 LTHLPTGIVIECQDERSQHKNRARAKSLLQARLLAAERERQRAEKAETRRNLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350
           +IR+Y   P   + D R  +      D+L  G+LDD ++  
Sbjct: 308 RIRTYNF-PQGRITDHRIGLTLYKLDDILKQGNLDDLIEPL 347


>gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
 gi|229576658|sp|B4U955|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
          Length = 356

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 124/349 (35%), Positives = 182/349 (52%), Gaps = 7/349 (2%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N L  + D +      +    K     + ++    K L ++ + L       K+    L 
Sbjct: 5   NFLEKIQDIEQK---YAQTEEKLASLDITKDADTYKALSKDLKELSYIHELYKDYNKILK 61

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAG 126
           D     EL  ++D   + ++  +NL    L+ E +    L      DS +  LE+ AGAG
Sbjct: 62  DIEDTKELLKDKDLRELAEKELENLNTKLLQKEKELINVLTPKDANDSKNVILEIRAGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LLRMY R+AE++ +K   LE +     G K   + I+G N Y  LK E G
Sbjct: 122 GEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVYSHLKYESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P  D++ ++ I+  D RI+T+RASGAGGQ+VNTT
Sbjct: 182 VHRVQRVPITESGGRIHTSTITVAVLPEADET-DVVINPQDLRIETFRASGAGGQYVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTE 305
           +SAVRITHIPTG+ + CQ ERSQ +NK +A  +L A+L +  E QK+EE     +     
Sbjct: 241 ESAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETDKERKEQVGT 300

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +IR+Y       V D R N+      DVLDGDLDD + +  A +
Sbjct: 301 GERSEKIRTYNFS-QNRVTDHRINLTLHKLQDVLDGDLDDIISSLQAKE 348


>gi|116491555|ref|YP_811099.1| peptide chain release factor 1 [Oenococcus oeni PSU-1]
 gi|290891160|ref|ZP_06554222.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
 gi|116092280|gb|ABJ57434.1| bacterial peptide chain release factor 1 (bRF-1) [Oenococcus oeni
           PSU-1]
 gi|290479124|gb|EFD87786.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
          Length = 357

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 168/343 (48%), Gaps = 4/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N V R   LN    DP +  +  +     +E   +   +   +  Q    +     EL
Sbjct: 8   IQNVVDRYDELNELLADPDVASDSGKYTRYAKELGEITPIVENYRRYQQLTNEINDDKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++  S+ ++    L+  + E+ E  +   +     D  +  +E+    GG E+  +A
Sbjct: 68  LNDKEMASLAKKELSELEPEQSELSEKLRVLMIPKDPNDDKNIIMEIRGAVGGDEANLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY  +A+ + +  E ++   GE  G K A + I G N Y  LK E G HR+ R+ 
Sbjct: 128 GDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINISGENVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
             ++  R HTS +++ V P  +D   E  I   D R D YR+SGAGGQH+N T SAVR+ 
Sbjct: 188 VTETQGRVHTSTATVGVMPEFEDIDTEGLIDPKDVREDVYRSSGAGGQHINKTSSAVRLV 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312
           H+PTG+ V+ Q++RSQ +N+++AW +LR+++Y+    + RE+      +         +I
Sbjct: 248 HLPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQENREQYDQQRRTKIGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N        V++GDL++ + A +   +
Sbjct: 308 RTYNF-PQNRVTDHRINFTLNKLDKVINGDLEEIIDALIIADQ 349


>gi|73748899|ref|YP_308138.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|147669660|ref|YP_001214478.1| peptide chain release factor 1 [Dehalococcoides sp. BAV1]
 gi|289432895|ref|YP_003462768.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
 gi|119361532|sp|Q3ZYA9|RF1_DEHSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039969|sp|A5FQC5|RF1_DEHSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|73660615|emb|CAI83222.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|146270608|gb|ABQ17600.1| bacterial peptide chain release factor 1 (bRF-1) [Dehalococcoides
           sp. BAV1]
 gi|288946615|gb|ADC74312.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
          Length = 355

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 175/345 (50%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +  +   P +  +    + L +ER  L + +   +  +    +      L
Sbjct: 5   LENCEKRFIEIEEEISKPEVINDARLVRTLAQERADLQDKVEMYRRYKTMAKELEEAKNL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       ++ ++  +    E   FE L     D     +E+ AG GG E+ 
Sbjct: 65  LESEKDEDMRGMVRGEIENLEKSLTDLYEQMTFELLPKDPNDDKSIIMEIRAGTGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L +MY R+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+ 
Sbjct: 125 LFASDLYKMYIRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P V + ++I+I+  + R+D + +SGAGGQ+V    +A+R
Sbjct: 185 RVPQTEASGRIHTSTATVAVLPQV-EEVDIDINMDEVRVDIFHSSGAGGQNVQKVATAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGWGR 310
           +TH+PTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E       ++  +     
Sbjct: 244 LTHMPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +   +   +L+G LD+ +      ++
Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347


>gi|295134987|ref|YP_003585663.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
 gi|294983002|gb|ADF53467.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/337 (29%), Positives = 171/337 (50%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLEL 75
             QR   +N     P +  +      L +E + L   +       E+ D L +   ++  
Sbjct: 8   VKQRFDEVNDLIIQPDIIADQKRYVELNKEYKDLRALMNERERYIELTDNLKEAEEIISD 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +   +  ++    +E K +   +     D+ +  +E+ AG GG E+  +A
Sbjct: 68  GSDPEMTEMAKLQQEEAKQELPALEEKIRMMLVPKDPEDAKNVVMEIRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + +    ++  +G   G K     + G + YG +K E GVHR+ R+ 
Sbjct: 128 GDLYRMYTKYVESKGWSHNIVDFSEGTSGGFKEMIFEVSGEDVYGTMKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   +  ++EI   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVLPEA-EEFDVEIDPKDVRIDYFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            PTG+V QCQ ++SQHKN+ +A+ +LR++LYE+EL K+ E      +S    G    +IR
Sbjct: 247 EPTGLVAQCQDQKSQHKNREKAFRVLRSRLYEIELAKKMEADAAKRNSMVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   V D R N+     S++++GD+   +   
Sbjct: 307 TYNY-PQGRVTDHRINLTLYDLSNIVNGDIQKIIDEL 342


>gi|331703153|ref|YP_004399840.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801708|emb|CBW53861.1| Peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 364

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L     +VE+     +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+    +    G    
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGARSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 308 KIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|218283971|ref|ZP_03489832.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
 gi|218215488|gb|EEC89026.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +N       +  +      L RE+  L   +   +E +  + +      L
Sbjct: 8   LEKMVERYREINDLMMQSDVVSDRKTMAKLGREQNELTPIVETYEEYKKAVEELEEAKVL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + EE D  I +     L+ ++ +    ++  +   +     DS++A LE+   AGG E  
Sbjct: 68  SKEE-DKEIREMAQMELEELEPKIQNYLDRLELLLVPKDPNDSHNAILEIRGAAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE + ++TE +E+ D E  G    +  + G  AYG LK E G HR+ 
Sbjct: 127 IFAGDLFRMYSKYAEAKGWRTEVIEMEDSEAGGFSLVSFKVNGEGAYGTLKFESGSHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++   P V ++ + +I  +D  I+T R+SGAGGQH+N TDSAVR
Sbjct: 187 RVPKTESQGRIHTSTATVLCMPEV-EAEDFDIDMNDLEIETMRSSGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV+CQ  RSQH+N+A A   +RA++Y  E ++RE      +  +T+IG G  
Sbjct: 246 IVHKPTGIVVKCQDGRSQHENRATALMTIRARVY--EERQRELDQKNEKERRTKIGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R          ++DG LDD M A     +
Sbjct: 304 AEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMDGRLDDLMAALQLADQ 349


>gi|167745421|ref|ZP_02417548.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
 gi|167655142|gb|EDR99271.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
          Length = 357

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 182/349 (52%), Gaps = 8/349 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V+R+  +  +  DP +  +    + LM+E+  L   +   KE      +   
Sbjct: 1   MFDKLESLVERMDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  VE  +   + LL      D  +  +E+ AGAGG
Sbjct: 61  SLELLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E L  ++    G K    +I G  AY   K E GV
Sbjct: 121 DEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P V+D        +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEVEDVEVEV-DLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           SAVR+TH+PTG+VV CQ E+SQ KNK +A  +LR++LYELE QK  +  A   +S     
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAEAEKRKSQVGTG 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R  +       V++GDLD+ + +  A  +
Sbjct: 300 DRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQ 347


>gi|71909299|ref|YP_286886.1| peptide chain release factor 1 [Dechloromonas aromatica RCB]
 gi|119361530|sp|Q479R5|RF1_DECAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71848920|gb|AAZ48416.1| bacterial peptide chain release factor 1 (bRF-1) [Dechloromonas
           aromatica RCB]
          Length = 360

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 179/341 (52%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V RL  ++     P    ++ + + L RER  ++  +      +    D      +
Sbjct: 9   LELLVDRLDEIDRMLSAPSTASDMDQFRKLSRERAEVEPVVVQFNAFRQAENDLAEAEAM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     +E     + R+       Q   L     D     LE+ AG GG ES  +A
Sbjct: 69  LSDPDMREFAEEEMAAAKARLPELELELQKLLLPKDPNDERSVLLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+++++ E +   + E  G +     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GSLFRMYSRFAERQRWQVEVMSASESELGGYREIICRIAGNGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETETQGRIHTSACTVAVMPEVDEVEDVNLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA A  +L A++ ++++  R + A+I  + K+ IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHANKASALKVLAARIKDVQV--RAQQAHISSTRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+     + ++DGD+D+ + A  A
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIAAIMDGDMDELLGALAA 346


>gi|242309130|ref|ZP_04808285.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
 gi|239524171|gb|EEQ64037.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
          Length = 356

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/335 (32%), Positives = 173/335 (51%), Gaps = 5/335 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   ++     P +  ++     L +E+  L+  +   K+    L        L  +++
Sbjct: 11  ERYEEISALLIKPEILNDIKRITELSKEQSDLEKLVQKSKQYLQNLQSIEENKSLLDDKE 70

Query: 81  DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E     +    E+E   +   L     D  + YLE+ AG GG E+  +   L +
Sbjct: 71  LGDLAKEEIKEAEAQNQELESEIKVLLLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLFK 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+AE + +K E +  ++    G K    LIKG  AY  LK E G HR+ R+   +S 
Sbjct: 131 AYVRYAESKGWKVEIISSNENNFGGYKEVIALIKGKGAYSRLKYEGGTHRVQRVPETESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P V D +E+ I+ +D +I+ +RA G GGQ VNTTDSAVRITHIPTG+
Sbjct: 191 GRIHTSAITVAIMPEV-DDVEVVINPNDLKIEVFRAGGHGGQCVNTTDSAVRITHIPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQ 318
            V  Q E+SQHKNK +A  +L+A++YE EL+ + E+ A   +S         +IR+Y   
Sbjct: 250 SVSMQDEKSQHKNKDKALKILKARIYEAELEAQMEQNAEARKSQVGSGDRSERIRTYNY- 308

Query: 319 PYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           P   + D R  +   S  +++ +GDLD  ++  +A
Sbjct: 309 PQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIA 343


>gi|15604741|ref|NP_219525.1| peptide chain release factor 1 [Chlamydia trachomatis D/UW-3/CX]
 gi|76788735|ref|YP_327821.1| peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13]
 gi|237804372|ref|YP_002888526.1| peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310824|ref|ZP_05353394.1| peptide chain release factor 1 [Chlamydia trachomatis 6276]
 gi|255317124|ref|ZP_05358370.1| peptide chain release factor 1 [Chlamydia trachomatis 6276s]
 gi|7388050|sp|O84026|RF1_CHLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361522|sp|Q3KMZ9|RF1_CHLTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3328413|gb|AAC67613.1| Peptide Chain Releasing Factor (RF-1) [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167265|gb|AAX50273.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           A/HAR-13]
 gi|231272672|emb|CAX09575.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|296435539|gb|ADH17713.1| peptide chain release factor 1 [Chlamydia trachomatis G/9768]
 gi|296436463|gb|ADH18633.1| peptide chain release factor 1 [Chlamydia trachomatis G/11222]
 gi|296437399|gb|ADH19560.1| peptide chain release factor 1 [Chlamydia trachomatis G/11074]
 gi|297139898|gb|ADH96656.1| peptide chain release factor 1 [Chlamydia trachomatis G/9301]
 gi|297748154|gb|ADI50700.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-EC]
 gi|297749034|gb|ADI51712.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-LC]
          Length = 359

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 182/342 (53%), Gaps = 13/342 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    +  + +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLAL--- 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
             E D  I+    + +   +  VE   KQ E+LL      D     +E+ AG GG E+  
Sbjct: 66  STEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R
Sbjct: 126 FVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVR
Sbjct: 186 VPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S++   G    
Sbjct: 246 ITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R  +   +   V++G+LD    A + 
Sbjct: 306 RIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTALVT 346


>gi|161511164|ref|NP_539109.2| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|225853308|ref|YP_002733541.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260562790|ref|ZP_05833276.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|20139330|sp|Q8YJ95|RF1_BRUME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790867|sp|C0RFB5|RF1_BRUMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225641673|gb|ACO01587.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260152806|gb|EEW87898.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
          Length = 359

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++G+LD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALIS 345


>gi|309775307|ref|ZP_07670316.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916970|gb|EFP62701.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 357

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +N     P +  +      L RE+  L   +    E ++ +        L
Sbjct: 8   LEGMVNRYHEINEMMMSPEIVTDSKMLAKLGREQADLTQVVETYTEYKNSVNALDDAKAL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +EE D  I +     ++ ++ ++E      +   +     DS++A +E+   AGG E  
Sbjct: 68  LMEE-DKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE + +K E +E+ D E  G    + ++KG   YG LK E G HR+ 
Sbjct: 127 IFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P + ++ + +I  +D  ++T RASGAGGQH+N TDSAVR
Sbjct: 187 RVPKTESQGRIHTSTATVLVTPEI-EAEDFDIDMNDLEVETMRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV+CQ  RSQH+N+A A   +R+++Y  E  +R+     G   +++IG G  
Sbjct: 246 IVHKPTGIVVKCQDGRSQHENRATALMTIRSRVY--EEHQRKLEEEQGVERRSKIGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R          +++G + D + A L+  +
Sbjct: 304 AEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQ 349


>gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
 gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
          Length = 355

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 184/345 (53%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   L  + +DP L +N    K  MRE  +L   +    +      + +    +
Sbjct: 5   LESLSVRWKELEEEIQDPALIKNQNRYKEAMREHAYLSKLMEEYAQYLRFEQEIIQTRAM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + L  ++ ++E  +   + LL      +  +  +E+  G GG E+ 
Sbjct: 65  MQEETDHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIMEIRGGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL+MYT +AE + +K E L  ++ E  G K  TL I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   + + R HTS  ++ V P  +++ EI I + D RID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEET-EIVIKQEDLRIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY++E  K++ E A   ++         
Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQSERAEDRKNQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
           +IR+Y   P   V D R N+       ++ GDL++ ++A  +A +
Sbjct: 304 RIRTYNY-PQNRVTDHRINLTLYKLDTIMQGDLNEIVEALCIAAR 347


>gi|196229467|ref|ZP_03128332.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
 gi|196226699|gb|EDY21204.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
          Length = 360

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 12/344 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L  +    +L+ +  +A+  +RE   L   ++  + +           +LA 
Sbjct: 9   KKAERFRELEAEISSSNLYDDPRKARETLREHTRLKELLANWETLNKTRAQLTENQDLAK 68

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            E D  + +  +  +  ++  +   +    F  L     +  DA +E+  G GG E+  +
Sbjct: 69  GE-DKEMAEMAAMEIPDLEKRIADTETAVQFALLPPDPNEDRDAIVEIRGGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+AE   FK E LE   GE  G+K     + G   +  L+ E GVHR+ R+
Sbjct: 128 AADLYRMYTRFAETHGFKLEPLEASVGELGGMKEVIFKVTGDQVFRTLRYESGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   + +++E+   + RI+  RA G GGQ VNTTDSAV++ 
Sbjct: 188 PATEAQGRIHTSTATVAVLPEA-EEVDLELKADEIRIEVCRAGGPGGQGVNTTDSAVQVM 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG +V+CQ  RSQ KNK +A  +LR++L  LE+++REE        K +IG G    
Sbjct: 247 HIPTGTIVRCQDGRSQQKNKEKALTILRSRL--LEVKQREEAEKYAAQRKGQIGTGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N+   +    ++G++D+ + +  A  
Sbjct: 305 KIRTYNF-PQNRVTDHRINLTLYNLDSFIEGNIDEMIGSLQAAD 347


>gi|270308380|ref|YP_003330438.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
 gi|270154272|gb|ACZ62110.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
          Length = 355

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 172/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +  +   P +  +    + L +ER  L   +   +  +    +      L
Sbjct: 5   LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAMSKELEEAKNL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       ++ ++  +    E    E L     D     +E+ AG GG E+ 
Sbjct: 65  LEIEKDEDMRDMVRGEIENLEKSMANLYEQMTLELLPKDPNDDKSIIMEIRAGTGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MYTR+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+ 
Sbjct: 125 LFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + ++I+I+  D R+D + +SGAGGQ+V    +A+R
Sbjct: 185 RVPQTEASGRIHTSTATVAVLPQA-EEVDIDINMDDVRVDIFHSSGAGGQNVQKVATAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGWGR 310
           +THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E       ++  +     
Sbjct: 244 LTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +   +   +L+G LD+ +      ++
Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347


>gi|300812481|ref|ZP_07092907.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496542|gb|EFK31638.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 361

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 168/343 (48%), Gaps = 7/343 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +   ++   R   +     DP +  +      + +E   +   +   ++ +    +    
Sbjct: 5   MVQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGN 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
            E+  +  D  +++        ++ E+   +       L     D  D  +E+   AGG 
Sbjct: 65  KEIIADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY ++AE + +    ++    E  G K   ++I G   Y  LK E G H
Sbjct: 125 EASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +S  R HTS +++ V P   + ++I++   + R+D YR+SGAGGQH+N T S
Sbjct: 185 RVQRIPVTESAGRVHTSTATVAVMPE-YEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIG 307
           AVR+TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+  E Q R++     +++     
Sbjct: 244 AVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTGD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R  +       +++G+LD+ + A 
Sbjct: 304 RSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345


>gi|256112206|ref|ZP_05453127.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 359

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDSYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++G+LD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALIS 345


>gi|119961991|ref|YP_948327.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
 gi|119948850|gb|ABM07761.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
          Length = 359

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/354 (31%), Positives = 178/354 (50%), Gaps = 16/354 (4%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           +    + GL D        + +  +  DP ++ +   A+ L R    L   +    + + 
Sbjct: 2   KMFESVQGLLD------EHAAIQAQLSDPAVYADQSAARKLGRRSAQLQGIVEAYNKWRG 55

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              D     E+A  ++D     E     ++I    E  +   +     D+ +  LEV  G
Sbjct: 56  LNDDLEAAKEMA--DEDPEFAAEVVQLEEQIPAAQERLRRLLIPRDPDDARNVILEVKGG 113

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP------NAY 178
            GG E+  +A  LLRMY R+AE R +KTE +   + +  G K   + IKG         +
Sbjct: 114 EGGDEAALFAGDLLRMYMRYAESRGWKTEMISATESDLGGYKDVAVAIKGNSNDPAQGVF 173

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG 
Sbjct: 174 ARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGP 233

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-AN 297
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA+L   + ++ +   + 
Sbjct: 234 GGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARLLAHQQEQIDAANSE 293

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +S    +    +IR+Y   P   + D RT  +  +   V++GDL+  +++ +
Sbjct: 294 QRKSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGDLEPVIQSAI 346


>gi|126725348|ref|ZP_01741190.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
 gi|126704552|gb|EBA03643.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 120/343 (34%), Positives = 173/343 (50%), Gaps = 15/343 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R  FL  K               L RE   L      I   Q  + D      +  
Sbjct: 80  QITARFEFLEAKLASGE----TDNIVELSREYSELKPVADQIMAFQTLVQDIDAAEAML- 134

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
             DD  + +  ++ L+ ++  +   +       L    AD+  A +E+  G GG E+  +
Sbjct: 135 --DDPEMRELAAEELKELRDSLPDAENAIKLVLLPKDTADARPAIIEIRPGTGGDEAALF 192

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY R+AE   +K E +E    E  GIK     IKG N +G LK E GVHR+ R+
Sbjct: 193 AGDLLRMYQRYAESNGWKFEIIEEQVSELGGIKEIIANIKGTNVFGKLKFESGVHRVQRV 252

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + ++++I  SD RIDT RASGAGGQHVNTTDSAVRIT
Sbjct: 253 PTTESGGRIHTSAATVAVLPEA-EEVDLDIPASDLRIDTMRASGAGGQHVNTTDSAVRIT 311

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           H+PTG++V    E+SQH+N+  A  ++R++LYE+E QK  +E A   +S         +I
Sbjct: 312 HLPTGMIV-VSMEKSQHRNREIAMQVMRSRLYEMERQKVADERAADRKSQVGSGDRSERI 370

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   + D R N+       V+ G+LD+ + A  A  +
Sbjct: 371 RTYNF-PQGRMTDHRINLTLYKLDQVMSGELDEIIDALHADDQ 412


>gi|86609051|ref|YP_477813.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|119361626|sp|Q2JL68|RF1_SYNJB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86557593|gb|ABD02550.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 360

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 176/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N       L  +  DP +  +  E + + + R  L+  +    + Q    D     EL
Sbjct: 10  LKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQAFHDWQKLNRDLQQTEEL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +       L++++       E      L     D  +  LE+ AG GG E+
Sbjct: 70  LRESASDPELEAMARAELEQLRARQEQLEEKLTLLLLPRDPNDDKNIMLEIRAGTGGEEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMYTR+AEK  +      + +GE  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 ALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEIQGDQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P V D +E+ I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAQGRVHTSTATVAVMPEV-DEVEVVIDPKDIEIKTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++L  +E+ A+I  + + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKL--QEQQASISSARRMQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R N +      +LDG+LDD ++A + + +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFPLQPILDGELDDLIQACIGLYQ 352


>gi|288905236|ref|YP_003430458.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|306831307|ref|ZP_07464467.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978212|ref|YP_004287928.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731962|emb|CBI13527.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|304426543|gb|EFM29655.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178140|emb|CBZ48184.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 359

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIEDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKDSKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      + E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQ 350


>gi|238899147|ref|YP_002924829.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259585226|sp|C4K7Y8|RF1_HAMD5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229466907|gb|ACQ68681.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 360

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 177/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP   Q+    +M+ RE   L N      E      D +    L
Sbjct: 9   LEALQERHEELQAHLADPLTIQDQERFRMMSREYAQLSNIAELFTEWLKLQNDMIAAKSL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +  ++ L++ K++ E    +           DS   +LE+ AG GG E+ 
Sbjct: 69  LQ---DPEMHEMATEELEKAKIQSEQLTQQLQILLLPKDIDDSRSCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE R +K E +  H+GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 IFAGDLFRMYARYAESRSWKMEIISAHEGEHGGYKEMITKISGEGVYGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +    +I+ SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPTTESQGRIHTSACTVAVMPEIPEEELPKITLSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  ++QKR++  A+   +         
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARMHAAQVQKRQQAQASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + R+Y   P   V D R N+      +V+ G LD  +   L 
Sbjct: 306 RHRTYNF-PQGRVTDHRINLTLYRLDEVMSGKLDILIHPLLR 346


>gi|166154244|ref|YP_001654362.1| peptide chain release factor 1 [Chlamydia trachomatis 434/Bu]
 gi|166155119|ref|YP_001653374.1| peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335493|ref|ZP_07223737.1| peptide chain release factor 1 [Chlamydia trachomatis L2tet1]
 gi|238687434|sp|B0B9D0|RF1_CHLT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687452|sp|B0BB09|RF1_CHLTB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|165930232|emb|CAP03717.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           434/Bu]
 gi|165931107|emb|CAP06671.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 359

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 182/342 (53%), Gaps = 13/342 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    +  + +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLAL--- 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
             E D  I+    + +   +  VE   KQ E+LL      D     +E+ AG GG E+  
Sbjct: 66  STEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R
Sbjct: 126 FVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVR
Sbjct: 186 VPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S++   G    
Sbjct: 246 ITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R  +   +   V++G+LD    A + 
Sbjct: 306 RIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTALVT 346


>gi|297157199|gb|ADI06911.1| peptide chain release factor 1 [Streptomyces bingchenggensis BCW-1]
          Length = 356

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 176/344 (51%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  +  DP +  +  EA  L +    L   +   +  +    D     EL
Sbjct: 5   VEELIGEHADLEKRLADPAVHADQREATRLGKRYAELTPIVGTYRSWKQTGEDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A    D     E  +   R +   +  +   +    +D  D  LEV AG GG ES  +A 
Sbjct: 65  AQL--DADFADEVKELEARREELTDRLRLLLVPRDPSDDKDVILEVKAGEGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+  +KTE ++ ++ +  G K   + +K       G   +  LK E GVH
Sbjct: 123 DLLRMYLRYAERVGWKTEIIDANESDLGGYKDVQVAVKAKSNAEPGQGVWARLKYEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +E+EIS++D RID YR+SG GGQ VNTTDS
Sbjct: 183 RVQRVPATESQGRIHTSAAGVLVTPEA-EEVEVEISQNDLRIDVYRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+   + 
Sbjct: 242 AVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R   +  +   VLDG+LD  ++A +
Sbjct: 302 RSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDPVIQACV 344


>gi|302542528|ref|ZP_07294870.1| peptide chain release factor 1 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460146|gb|EFL23239.1| peptide chain release factor 1 [Streptomyces himastatinicus ATCC
           53653]
          Length = 356

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 180/345 (52%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +   + L  +  DP +  +  EAK L +    L   I   ++ +    D     EL
Sbjct: 5   VEDLIGEHAALEKRLADPAVHADQREAKRLNKRYAELTPIIDTYRDWKQTGDDIETAQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A ++ D     +    L+  + E+ +  +   +    +D  D  LEV AG GG ES  +A
Sbjct: 65  AQDDPD---FADEVKELELRRAELTDRLRLLLVPRDPSDDKDVILEVKAGEGGEESALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGV 187
             LLRMY R+AE+  +KTE ++ ++ +  G K   + +K       G   +  LK E GV
Sbjct: 122 GDLLRMYLRYAERIGWKTEIIDANESDLGGYKDVQVAVKAKGTIEPGQGVWARLKYEGGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ VNTTD
Sbjct: 182 HRVQRVPATESQGRIHTSAAGVLVTPEA-EEVEVEIGPNDLRIDVYRSSGPGGQSVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVRITH+PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+   +
Sbjct: 241 SAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQVRTV 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   + D R   +  +   VLDG+L   ++A +
Sbjct: 301 DRSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGELAPVIQACV 344


>gi|256059849|ref|ZP_05450036.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 359

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   +  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDVAAM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|113476549|ref|YP_722610.1| peptide chain release factor 1 [Trichodesmium erythraeum IMS101]
 gi|119361636|sp|Q110D7|RF1_TRIEI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110167597|gb|ABG52137.1| bacterial peptide chain release factor 1 (bRF-1) [Trichodesmium
           erythraeum IMS101]
          Length = 369

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 188/352 (53%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q  + L  +  DP + ++  E + L + R  L+  ++   E ++   +   
Sbjct: 6   LLDKLKSVEQTYNELTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQEELAD 65

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
             E+  E   D  + +     ++ ++ ++E  +       L     D  +  LE+ AG G
Sbjct: 66  AKEILKEAVGDLEMQEMAKVEVEDLEAKLESLENQMKIALLPRDPNDDKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  L+RMY+R++E + +K   L     +  G K A L IKG + Y  LK E G
Sbjct: 126 GDEASIWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKLKFEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ + P V D +E+EI + D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPVTEAGGRVHTSTATVAIMPEV-DDVEVEIDQKDIELSTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AV + H PTG+ + C QERSQ +N+ +A  +LRAKLYE++L  +E+ A +    ++++
Sbjct: 245 ETAVDLFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKL--QEQQAEVSSIRRSQV 302

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y  +    V D R N +  S   +L+GD+++ ++A +   +
Sbjct: 303 GTGSRSEKIRTYNYKD-NRVTDHRLN-QNFSLVPLLEGDIENVIQACITQDQ 352


>gi|306833419|ref|ZP_07466546.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
 gi|304424189|gb|EFM27328.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
          Length = 359

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEANTRETVTVYREYKQILQNIEDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKDSKASKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFASDLLQMYQKYAENQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      + E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQ 350


>gi|42521715|ref|NP_967095.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
 gi|61214632|sp|Q6MRK9|RF1_BDEBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39574245|emb|CAE77749.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
          Length = 357

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 171/342 (50%), Gaps = 7/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   +N   + P +  N  + + LM+E  +L+  +   ++ + +  +     EL
Sbjct: 5   LDAVESRYEEVNMALQRPDIASNQTQYRALMKELGNLEKIVLVYRDYRKKTENLKASKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + ++ ++ E+   +       +     D  +  LE+ AGAGG E+ 
Sbjct: 65  LTAEQDAEMRELIREEVKELEAELPDLEQQLKIALIPKDPNDDKNTILEIRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L R Y  +A  + +K E +   +G   G K     I G + +  +K E GVHR+ 
Sbjct: 125 LFADELFRGYVHYASTQGWKVEMISFSEGNAGGAKEIIASITGDSVFSKMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P V +  EI+I  SD RI+T R+ G+GGQ VN T+SAVR
Sbjct: 185 RVPKTEAAGRIHTSTVTVAVIPEV-EVSEIKIPMSDVRIETMRSQGSGGQSVNRTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           + H+PTG+ V+CQ+ +SQ  N+ +A+ +L AKL ++E +K R+E +++            
Sbjct: 244 VVHLPTGIDVKCQEGKSQSTNRERAFQILYAKLQQIEDEKARKEASDVRLEQIGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R  +       V+ G  +  +   +A
Sbjct: 304 RIRTYNF-PQTRITDHRIGLTIHQLDQVMSGSFELLIDPLIA 344


>gi|302334925|ref|YP_003800132.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
 gi|301318765|gb|ADK67252.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
          Length = 355

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 120/348 (34%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  +  DP +  +  E   + +E       ++  +E    L D  +  E+
Sbjct: 5   LEKLIAAYEELEKRMVDPTVVSDPKEYARIAKEHASQAELVAKAREYVGALDDIEVAKEM 64

Query: 76  ALEEDDCSILQETSDNL--QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E  D S  +   +++     KL     + + +L      D  +  +E+ AG GG E+ 
Sbjct: 65  QRETSDASEKEMLQEDIGANEAKLPALEDEIKVMLIPGDPNDEKNTIVEIRAGVGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+A   K+KTE L     E  G K+    + G   +  +K E GVHR+ 
Sbjct: 125 IFAGDLYNMYARFASTHKWKTEVLSSSPSEAGGFKTIEFKVTGDKVFSVMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R  TS +++ V P   D I+IEI + D RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RIPKTESQGRIQTSTATVAVLPEA-DEIDIEIKDEDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PT  VVQ Q +RSQ +N+A    MLRA+LYE+EL+K++  A  G +   +IG G  
Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNRAVCMEMLRARLYEVELEKQQ--AEQGAARLGQIGHGSR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y  QP   V D R     ++ + VL GD L + + A  A ++
Sbjct: 302 AEKIRTYN-QPQDRVTDHRIGF-NSTYNGVLLGDRLPEVIDALAAAER 347


>gi|294101724|ref|YP_003553582.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
 gi|293616704|gb|ADE56858.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
          Length = 358

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 177/344 (51%), Gaps = 6/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +    L  +  DP +  N+ E + L ++   +++A+   +E +    D      L
Sbjct: 7   LDDLEKTFVDLEKQMSDPVVAANLKEIQQLAKKHAQIESAVLKYREYKKVKSDLEEAHSL 66

Query: 76  AL--EEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132
               + D   + +E     + +   +  +    LL     D     +E+  GAGG E+  
Sbjct: 67  LHSGDGDMQELAREEIKEKEPLLECIRDELHVLLLPVDPNDEKSVIMEIRGGAGGEEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+ E+  ++ E ++ ++    G+K     I G  AY  LK E GVHR+ R
Sbjct: 127 FSANLYRMYSRFCEREGWRIEIIQSNETGIGGLKEVIFKIDGRGAYSKLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS S++ V P V + ++++I   D +IDTYR+SGAGGQHVN TDSAVRI
Sbjct: 187 VPMTEAGGRIHTSTSTVAVLPEV-EDVDVDIRTEDLKIDTYRSSGAGGQHVNMTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+VV CQ ERSQ KN+A+A   LRAKLY LE +K+ E        +   G    +
Sbjct: 246 THLPTGIVVTCQDERSQIKNRAKAMMYLRAKLYGLEKEKQAEEQAEERRGQIGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +        LDGDL + + A     +
Sbjct: 306 IRTYNY-PQNRITDHRIGLTLYKLDQYLDGDLYEMIDAMTMADQ 348


>gi|328950071|ref|YP_004367406.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450395|gb|AEB11296.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
          Length = 369

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 167/347 (48%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                     L  +  DP +  +    + L R    L   +   +E    L D      L
Sbjct: 15  LKQLETEYQALEAQLGDPGVLADPKRYRELSRRYAELGEIVRVYREYTKTLDDLEQAQAL 74

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +      + ++   +  + E           D+ +A +E+ AG GG E+ 
Sbjct: 75  L---DDPELGEMARAEKETLEARRDELERELELLLLPKDPVDAKNAIVEIRAGTGGEEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+AE+  +  E L+ H  +  G       + G  AYG  K E GVHR+ 
Sbjct: 132 LFAGDLYNMYVRYAERLGYTVEVLDSHPTDLGGFSKVVFQVNGSGAYGVFKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  +++ + E+  S+ RID  RASG GGQ VNTTDSAVR
Sbjct: 192 RVPATETQGRIHTSTATVAVLPEAEEA-DFELDMSEIRIDVQRASGPGGQGVNTTDSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H+PTG++V CQ  RSQ KN+ +A  +LR++L  LE+++ EE A +  +   +IG G  
Sbjct: 251 VVHLPTGIIVTCQDSRSQIKNREKALTILRSRL--LEMKRAEEEAKLRRTRLAQIGTGER 308

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R +    +   VL G+L++   A     +
Sbjct: 309 SEKIRTYNF-PQSRVTDHRIHYTTHNLEGVLAGELEELTNALKKADQ 354


>gi|57234023|ref|YP_181923.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
 gi|119361531|sp|Q3Z776|RF1_DEHE1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57224471|gb|AAW39528.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
          Length = 355

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +  +   P +  +    + L +ER  L   +   +  +    +      L
Sbjct: 5   LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELEDTKNL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       +  ++  +         E L     D     +E+ AG GG E+ 
Sbjct: 65  LEIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MYTR+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+ 
Sbjct: 125 LFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P V + ++I+I+  D R+D + +SGAGGQ+V    +A+R
Sbjct: 185 RVPQTEASGRIHTSTATVAVLPQV-EEVDIDINMDDVRVDIFHSSGAGGQNVQKVATAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGWGR 310
           +THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E       ++  +     
Sbjct: 244 LTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +   +   +L+G LD+ +      ++
Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347


>gi|311898376|dbj|BAJ30784.1| putative peptide chain release factor 1 [Kitasatospora setae
           KM-6054]
          Length = 358

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 174/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  +  DP +  +   A+ L +    L          +    D +   EL
Sbjct: 5   VEELLVEHADLEKRLADPSVHADQANARKLAKRYAELTPITRTYLAWRQAGEDIVAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D   + E   +  R     E  +   +     D  D  LEV AG GG ES  +A 
Sbjct: 65  ATE--DPDFIAEAKASEARQDELTEELRLLLVPRDPNDDKDVILEVKAGEGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+  +KTE ++ ++ +  G K  ++ +K       G   +  LK E GVH
Sbjct: 123 DLLRMYLRYAERVGWKTELIDANESDLGGYKDVSVAVKTRGSAEPGQGVWARLKYEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ VNTTDS
Sbjct: 183 RVQRVPATESQGRIHTSAAGVLVTPEA-EEVEVEIHANDLRIDVYRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+V  CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+   + 
Sbjct: 242 AVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREASDARRSQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VLDGDL+  +++ +
Sbjct: 302 RSERIRTYNF-PENRISDHRTGFKSYNLDQVLDGDLNAVIQSCV 344


>gi|110003948|emb|CAK98288.1| peptide chain release factor 1 protein [Spiroplasma citri]
          Length = 358

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 182/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R + +N +   P +  +V +   L +E+  L+  ++     ++ L +      +
Sbjct: 9   LETMLKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKNVLNNINEAKLI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   + L+  ++  E      +   L     D  +   E+   AGG E  
Sbjct: 69  LETEKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGGDEGN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++AE++ +K E +E ++ E  G  + + ++KG   Y  +K E G HR+ 
Sbjct: 129 IFAGDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P + + ++ EI  +D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RIPKTESKGRVHTSTATVAVLPEI-EEVDFEIKTADLKIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGR 310
           ITH+PTG VV  Q  RSQH NKA A   LR+KLYE + +K  E    + + +        
Sbjct: 248 ITHLPTGFVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERWTLRKDAVGTGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       +++G+LD+ + A +  ++
Sbjct: 308 KIRTYNY-PQNRVTDHRINLTLQKLDQIMEGNLDEIVVALINEEQ 351


>gi|91786752|ref|YP_547704.1| peptide chain release factor 1 [Polaromonas sp. JS666]
 gi|119361575|sp|Q12F86|RF1_POLSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91695977|gb|ABE42806.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas sp.
           JS666]
          Length = 373

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 119/359 (33%), Positives = 178/359 (49%), Gaps = 19/359 (5%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L    D      RL  L++      +  ++   + L RE             +  R  D 
Sbjct: 5   LRQTLDRQLL--RLHELDSLLSATDVVSDLDRFRALTREHAEASVVAEQYTRLTSREADL 62

Query: 70  LILLELALEE-DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAG 124
                +  E  DD  +     + +   KL++    E  Q   +     D+  A++E+ AG
Sbjct: 63  ASAEGMLAEAKDDPEMAAMAEEEIAAAKLDIAQLDEALQLMLIPKDPDDARAAFIEIRAG 122

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP------NAY 178
            GG ES  +A  L RMYTR+AE+ +++ E +     E  G K   L + GP        Y
Sbjct: 123 TGGDESALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRMDGPTDATGVGVY 182

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L+ E G HR+ R+   ++  R HTS  ++ V P  D+++ I+I+ +D RIDTYRASGA
Sbjct: 183 GKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEAVAIQINPADLRIDTYRASGA 242

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N TDSAVRITHIPTG+V +CQ +RSQH+NKA+A  +L A++   E  + E  A  
Sbjct: 243 GGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIV--EKDRSERAAKD 300

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K  +G G    +IR+Y   P   + D R N+       +++GDL D + A    +
Sbjct: 301 AAMRKGLVGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVITALQVAR 358


>gi|254482800|ref|ZP_05096037.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
 gi|214036881|gb|EEB77551.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
          Length = 361

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 174/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++    D     +  + + L RE   L+  +    +      D      L
Sbjct: 9   LETLTDRHEEVSALLGDNETISDQDKFRDLSREYSELEAVVRCYADYSQVKGDLDEAR-L 67

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LE+ D  + +   + +     R++      Q   L     DS++ +LE+ AG GG E+ 
Sbjct: 68  MLEDSDPDLREMAQEEIDSGSGRLEQLEAQLQALLLPRDPNDSHNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE   +K E L    GE  G K     ++G + Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAENMGWKVEVLSERHGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P  +   ++EI+++D R+DTYRASGAGGQHVN TDSAVR
Sbjct: 188 RVPETESQGRIHTSACTVAIMPEAEAVDQVEINKADLRVDTYRASGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           +TH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL      K  EE A    +         
Sbjct: 248 LTHLPSGIVVECQDERSQHKNRARAMSLLQAKLLTSAQDKAAEEQAEQRRNLVGTGDRSD 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+     ++V++GDL   +   
Sbjct: 308 RIRTYNF-PQGRLTDHRINLTLYKLAEVVEGDLGAVVGPL 346


>gi|256384120|gb|ACU78690.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256384952|gb|ACU79521.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455380|gb|ADH21615.1| peptide chain release factor 1 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 364

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKVI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L     +VE+     +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+    +    G    
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQADATRKNAVGTGARSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 308 KIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|148244818|ref|YP_001219512.1| peptide chain release factor 1 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166223616|sp|A5CW65|RF1_VESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146326645|dbj|BAF61788.1| peptide chain release factor RF-1 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 361

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    DP +  NV +   L  E   L       +     L +     +L
Sbjct: 9   LEQLSIRLEEVSIMLSDPEVVSNVKKFTKLSIEYAQLTPVNQQFQTYLSHLKNLEDA-QL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  I     + +   K  +     +     L     DS +  +E+ AG GG E+ 
Sbjct: 68  ILFEDDMEIKTMAKEEILNTKKILSQLDLKLKKSILPKDPNDSRNIIIEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L ++Y+R++EK+K+  E +    GE  G K     I G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKIYSRYSEKQKWTIEIISSSIGEHGGFKEIIARISGINVYSKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P V++  EI I+ +D RIDT+RASGAGGQHVN TDSAVR
Sbjct: 188 RVPTTESQGRIHTSACTVAIMPEVENIEEINININDVRIDTFRASGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+PTG VV+CQ  RSQHKNKAQA ++L +++ + + Q++        + K  IG G  
Sbjct: 248 ITHLPTGTVVECQDGRSQHKNKAQAMSVLASRILDAQQQEQ--QEQQSSTRKELIGSGDR 305

Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+     +++++G+L   +K  +  ++
Sbjct: 306 SQRIRTYNY-PQGRITDHRINLTLYKLTEIMEGNLSAIIKPLIIEQQ 351


>gi|332299913|ref|YP_004441834.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176976|gb|AEE12666.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 368

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 169/355 (47%), Gaps = 20/355 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            +  V R   L T   DP++  +      L +E  HL   +      K++  +  +    
Sbjct: 8   IEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAEST 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L+    + D  +     + L   K E+    E  +   L +   D  +A LE+ AG GG 
Sbjct: 68  LQDT--DSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+ E + +        +G   G K   L + G   YG LK E GVH
Sbjct: 126 EAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   D  E+ I+E + + DT+R+SGAGGQ+VN  +S
Sbjct: 186 RVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDTFRSSGAGGQNVNKVES 244

Query: 249 AVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIG 299
            VR+ +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  +EIA+  
Sbjct: 245 GVRLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDEIASRR 304

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++  +      +IR+Y   P   V D R  +   +   VL GDL   + A +  +
Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358


>gi|237802457|ref|YP_002887651.1| peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT]
 gi|231273691|emb|CAX10469.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 359

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 182/342 (53%), Gaps = 13/342 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    +  + +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLAL--- 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEA--DSNDAYLEVHAGAGGTESQD 132
             E D  I+    + +   +  VE   KQ E+LL      D     +E+ AG GG E+  
Sbjct: 66  STEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPHPDDDLSVIMELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R
Sbjct: 126 FVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVR
Sbjct: 186 VPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S++   G    
Sbjct: 246 ITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R  +   +   V++G+LD    A + 
Sbjct: 306 RIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTALVT 346


>gi|320546676|ref|ZP_08040988.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
 gi|320448731|gb|EFW89462.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
          Length = 359

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVAVYREYKKVLQNIEDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      + E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKVIRARVADHFAQIAQNEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEIIDALVLFDQ 350


>gi|315657282|ref|ZP_07910164.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491754|gb|EFU81363.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 367

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 169/344 (49%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  DP L  N   A+ + R    L    + ++       D     E+
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E        +                D+ D  +E+ AG GG ES  +A 
Sbjct: 71  AGE--DPDFAAEIPGLEAAFEQSNADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A++  K           +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VL+GDL   +++ +
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAI 351


>gi|116513791|ref|YP_812697.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123397|ref|YP_004033656.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|122275439|sp|Q04BB3|RF1_LACDB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116093106|gb|ABJ58259.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|312279960|gb|ADQ60679.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125449|gb|ADY84779.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
 gi|325684404|gb|EGD26572.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 361

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 92/340 (27%), Positives = 167/340 (49%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   +     DP +  +      + +E   +   +   ++ +    +     E+
Sbjct: 8   LESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++        ++ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +    ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   + R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESAGRVHTSTATVAVMPE-YEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+  E Q R++     +++        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R  +       +++G+LD+ + A 
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345


>gi|160916055|ref|ZP_02078262.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
 gi|158431779|gb|EDP10068.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
          Length = 357

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 178/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +N     P +  +      L RE+  L   +    E ++ +        L
Sbjct: 8   LEGMVNRYHEINEMMMSPEIVSDSKMLAKLGREQADLVQVVETYTEYKNSVQALEDAKAL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +E DD  I +     ++ ++ ++E      +   +     DS++A +E+   AGG E  
Sbjct: 68  LME-DDKEIKEMAKMEIEELEPKIEGYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE + ++ E +E+ D E  G    + ++KG   YG LK E G HR+ 
Sbjct: 127 IFAGDLYRMYSKYAESQGWRIEIIEMDDCEAGGFSLVSFMVKGDGVYGRLKFESGSHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P + ++ + +I  +D  I+T RASGAGGQH+N TDSAVR
Sbjct: 187 RVPKTESQGRIHTSTATVLVTPEI-EAEDFDIDMNDLEIETMRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV+CQ  RSQH+N+A A   +R+++Y  E  +R+     G   +++IG G  
Sbjct: 246 IVHKPTGIVVKCQDGRSQHENRATALMTIRSRVY--EEHQRKLEEEQGVERRSKIGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R          +++G + D + A  +  +
Sbjct: 304 AEKIRTYNY-PQNRVTDHRIGYNVNQLDRIMEGRMQDLLDALCSADQ 349


>gi|104773785|ref|YP_618765.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|119361552|sp|Q1GAX5|RF1_LACDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|103422866|emb|CAI97528.1| Peptide chain release factor 1 (RF-1) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 361

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 93/340 (27%), Positives = 168/340 (49%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   +     DP +  +      + +E   +   +   ++ +    +     E+
Sbjct: 8   LESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++        ++ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +    ++    E  G K A ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRAAIMITGNKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   + R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESAGRVHTSTATVAVMPE-YEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+  E Q R++     +++        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R  +       +++G+LD+ + A 
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345


>gi|163846084|ref|YP_001634128.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222523819|ref|YP_002568289.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
 gi|189039962|sp|A9WE79|RF1_CHLAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790872|sp|B9LJ02|RF1_CHLSY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163667373|gb|ABY33739.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222447698|gb|ACM51964.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
          Length = 360

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 179/350 (51%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L      P +  NV   +   RE++ +++ ++  +E Q      + 
Sbjct: 1   MFDKLAAVAARYDELTELMAQPEVATNVTLLQQYAREQREIEDIVNAYREYQATQR-AIE 59

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E  LE+ D  +     + L+  +  +    E  +   L     DS D  +E+  G GG
Sbjct: 60  EAEAMLEDSDPELRALAQEELETQRKRLASLEEQLKLLLLPRDPNDSKDVIMEIRQGEGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE R +K E   + +    GIK     I G  AY  LK E GV
Sbjct: 120 DEAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGV 179

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P V+++ EIEI   D RID +R++G GGQ VNTTD
Sbjct: 180 HRVQRVPATEARGRIHTSTATVAVLPEVEET-EIEIKPEDLRIDVFRSAGHGGQGVNTTD 238

Query: 248 SAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           SAVRI +    P  +VV CQ  RSQ +N+ +A  +LRA+LY  E +KR+    IG S   
Sbjct: 239 SAVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQR--EIGASRLA 296

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++G G    +IR+Y   P   + D R     ++   VLDG+LD  ++A +
Sbjct: 297 QVGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALI 345


>gi|295425486|ref|ZP_06818179.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
 gi|295064825|gb|EFG55740.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
          Length = 362

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 96/345 (27%), Positives = 169/345 (48%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +        L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLAAHYEELQEMMADPEVINDTKRYMEVSKEEADLREVVQKYKKYKAYQKEIADNKKI 67

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +++   +      + +    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISDESDADLVEMAKEENSELEKELPELEEQIRILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSMVDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+  E Q R++     +++        
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYETQNRDKYDAKRKNAVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|239832947|ref|ZP_04681276.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
 gi|239825214|gb|EEQ96782.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
          Length = 357

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 183/343 (53%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L   +  I+E+ D   + + L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSETYVKLASEYSELQEVVGKIRELTDARREAVDLAAM 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDAATDAEMRALALEELPEVEKRIGTLEQEVQILLLPKDAADEKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAETERSESRRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345


>gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950208|gb|AEA23905.1| Peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 366

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  +   + L     DP +  +   A+ L R    +   ++  KE+     D     ELA
Sbjct: 13  DALLAEHADLELMLADPAVHADPARARRLGRRYAEIGPVVAVAKELASVRDDLAAARELA 72

Query: 77  LEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              DD +   E  D   R+  LE    +         D++D  LEV +G GG ES  +A 
Sbjct: 73  A--DDPTFGAEADDLAARVPALEARLAELLV-PRDPHDADDVVLEVKSGEGGEESALFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L+RMYTR+AE R + TE L+    +  G K  TL ++         +  LK E GVHR+
Sbjct: 130 DLVRMYTRFAESRGWSTEILDATTSDLGGYKDVTLSVRARVPAADGVWSALKFEGGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   +S  R HTS + + VYP    D   IEI ++D R+D +R+SG GGQ VNTTDSA
Sbjct: 190 QRVPVTESQGRIHTSAAGVLVYPDTGADDAGIEIDDNDLRVDVFRSSGHGGQSVNTTDSA 249

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ ERSQ +N+A+A  +LR++L  L  ++    A+    S+   +  
Sbjct: 250 VRITHLPTGIVVSCQNERSQLQNRARAMEVLRSRLQALAEEEAAARASDARRSQVRTVDR 309

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  + S VLDGDL D + A +A  +
Sbjct: 310 SERIRTYNF-PENRIADHRVGYKAHNLSAVLDGDLGDVIAALVAADR 355


>gi|239617233|ref|YP_002940555.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
 gi|239506064|gb|ACR79551.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
          Length = 361

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 117/338 (34%), Positives = 179/338 (52%), Gaps = 11/338 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++L  +  K  D  +  N  +   L +    L         +  +  +     E 
Sbjct: 7   IELFKKQLEEVEAKLSDSSIVGNPSKLMELSKRHAELKEISRSYDLLASKKQELQEW-EE 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQD 132
             E       +E   N+  ++ E+E  +      L+  E    D  +E+ AG GG E+  
Sbjct: 66  IKELLSPEEREEAEKNIAELQKEIEQIELNLKFLLIPDELGGKDIIVEIRAGTGGEEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+AE+  +K E LE ++ +  G K  T  IKG + +  LK E GVHR+ R
Sbjct: 126 FAGDLFRMYTRYAERNSWKVETLESNETDLGGFKEVTFQIKGKDVFRKLKYESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + +++ I  S+ RIDT+R+SGAGGQHVN T+SAVRI
Sbjct: 186 VPQTESGGRIHTSTATVAVLPKASE-VDVAIDPSELRIDTFRSSGAGGQHVNRTESAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310
            H+PTG+ V  Q ERSQH+NKA+A  +LRA+LY L   ++E  + + +  +++IG G   
Sbjct: 245 VHLPTGITVTVQSERSQHQNKARAMEILRARLYSLYRSQQE--STLSQQRRSQIGTGERS 302

Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R N       D+LDGDLD+ +
Sbjct: 303 EKIRTYNF-PQNRVTDHRINYTTYRLQDILDGDLDELI 339


>gi|157736354|ref|YP_001489037.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315635491|ref|ZP_07890757.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
 gi|166977359|sp|A8EQZ4|RF1_ARCB4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157698208|gb|ABV66368.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315480249|gb|EFU70916.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
          Length = 355

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 118/336 (35%), Positives = 178/336 (52%), Gaps = 9/336 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   +N       +  ++     L +E+  +   +S  KE    L D      +  + + 
Sbjct: 12  RFEEINQLLMSSEITSDIKRMTDLSKEQSSIQPIVSKAKEYIKVLEDIEENKLMLDDPEL 71

Query: 82  CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + +E    L+  K E+E + +   +     D  + YLE+ AG GG E+  +   L R 
Sbjct: 72  GDLAKEELKELETRKPELEEEIKVLMIPKDPNDDRNIYLELRAGTGGDEAAIFVGDLFRA 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+AE   +K E +   D E  G K   +L+KG + Y  LK E G HR+ R+   +S  
Sbjct: 132 YLRYAENNGWKVEIMSSSDSESGGYKEIVILVKGDHVYSKLKFEGGTHRVQRVPATESQG 191

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P V D +EIEI+E+D +ID  RASG GGQ VNTTDSAVRITHIP+G+V
Sbjct: 192 RVHTSAITVAVMPEV-DDVEIEINENDLKIDVMRASGNGGQSVNTTDSAVRITHIPSGIV 250

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVL 317
           V  Q ++SQHKNK +A  +L+AKLYE+E++K+ E    G + K ++G G +   IR+Y  
Sbjct: 251 VTNQDQKSQHKNKDRALKVLKAKLYEIEMEKKMEAE--GATRKEQVGTGDRSGRIRTYNY 308

Query: 318 QPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            P   + D R N+       ++ DG   + +   +A
Sbjct: 309 -PQNRISDHRINLTLYRLDYIMNDGLFGEVIDPLIA 343


>gi|78358024|ref|YP_389473.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|119361534|sp|Q30X18|RF1_DESDG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78220429|gb|ABB39778.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 357

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  ++   L  +   P ++ +    + L +    L   +   +  +    +     E+
Sbjct: 5   LEHLERQFEDLEQQLSSPEVFGDQERYRKLTKAHSDLKEIVEVFRVYRQLNEELAGNKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD----SNDAYLEVHAGAGGTESQ 131
             +  D  I     + +  I+  +   + E  L           +  LE+ AG GG E+ 
Sbjct: 65  LRDS-DPEIQAMAREEIDAIEKRLPEMEHELKLLLLPKDPLDEKNVVLEIRAGTGGEEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE   ++ E L   + +  G K    LI G   Y  +K E G HR+ 
Sbjct: 124 LFAADLFRMYLRYAEDMGWRVEVLSSSETDSGGFKEIIGLISGDKVYSRMKFESGTHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D +E+++   D R D YR+SG GGQ VNTTDSAVR
Sbjct: 184 RVPATETQGRIHTSAATVAVMPEA-DEVELDMKPEDLRFDVYRSSGPGGQSVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +THIPTG+ V CQ E+SQHKNKA+   +L ++L + +  KR EE+A    S         
Sbjct: 243 VTHIPTGITVACQDEKSQHKNKAKGLKILASRLLQAQEDKRHEELAEQRRSLVGTGDRSG 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+        ++G + D + A + 
Sbjct: 303 RIRTYNF-PQGRITDHRINLTLYKLDAFMEGQIGDMLDALIT 343


>gi|42560702|ref|NP_975153.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|61214633|sp|Q6MU89|RF1_MYCMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42492198|emb|CAE76795.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|301320433|gb|ADK69076.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 364

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 180/345 (52%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKKAVEHIKDAKAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L     +VE+     +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P + + +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q  RSQH NK  A  MLR K+YE E++K++  A+    +    G    
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRTKVYEAEVEKQQAQADATRKNAVGTGARSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 308 KIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|309791603|ref|ZP_07686096.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
 gi|308226321|gb|EFO80056.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
          Length = 360

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 116/353 (32%), Positives = 172/353 (48%), Gaps = 15/353 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   + V R   L      P +  N+   +   RE++ L+  ++  +  Q        
Sbjct: 1   MFDKLQSVVARYDELGELMAQPEVVNNLSLLQQYAREQRELEEVVNAFQAYQRARQAAEE 60

Query: 72  LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E  D  + +   + L+    RI    E  +   L     D+ D  +E+  G GG
Sbjct: 61  AHTMLNESSDAEMRELAHEELESQRTRIAQLEEEIKLLLLPRDPNDAKDVIIEIRQGEGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE R +K E   I D    G K A   I+G NAY  LK E GV
Sbjct: 121 DEAALFAADLYRMYVRYAELRGWKVEVDSITDNGIGGFKEAVFEIRGENAYSQLKYEGGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P V +   IEI + D R D +R+ G GGQ VNTTD
Sbjct: 181 HRVQRVPATEARGRIHTSTATVAVMPEV-EPTVIEIKDEDVRTDVFRSGGHGGQGVNTTD 239

Query: 248 SAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           SAVR+ +    P  +VV CQ  RSQ KN+ +A ++LRAKLY  E +K++     G S   
Sbjct: 240 SAVRLVYRGGTPDEIVVTCQDGRSQIKNREKAMSVLRAKLYAREQEKQQRAQ--GASRLA 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++G G    +IR+Y   P   + D R     ++   VL G+LD  + A +   
Sbjct: 298 QVGTGERAEKIRTYNF-PQDRITDHRIGQNFSNLPGVLAGNLDKIIDALIVYD 349


>gi|119484803|ref|ZP_01619285.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
 gi|119457621|gb|EAW38745.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
          Length = 368

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/340 (31%), Positives = 183/340 (53%), Gaps = 13/340 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            Q  + L  +  DP +  N  E + + +ER  ++  ++  +  +    +     ++  E 
Sbjct: 14  EQTFNELTLRLADPDVSNNPTELQRIAKERSSIEEVVNTYQLWKTAQEELTGARQVQKEA 73

Query: 80  -DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            +D  + +  +  ++ ++ ++E  +       L S   D  +  LE+ AG GG E+  WA
Sbjct: 74  GEDPEMKEMAALEVEELQNQLEQLETHLKVLLLPSDPNDDKNIMLEIRAGTGGDEASIWA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+RMY+R+AE +K++ + +     +  G K A L IKG   Y  LK E GVHR+ R+ 
Sbjct: 134 GDLVRMYSRYAEGQKWQVKIVSESSADMGGFKEAILEIKGDQVYSKLKFEAGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P V D +++EI   D  + T R+ GAGGQ+VN  ++AV + H
Sbjct: 194 LTEAGGRVHTSTATVAVMPEV-DEVDVEIDPKDIEMSTARSGGAGGQNVNKVETAVDLIH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L  RE+   +    ++++G G    +
Sbjct: 253 KPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKL--REQQEAVTSMRRSQVGTGARSEK 310

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y  +    V D R   +  S S VL+G +DD + A +
Sbjct: 311 IRTYNYKD-NRVTDHRLG-QNFSLSPVLEGGMDDVVDACV 348


>gi|330837036|ref|YP_004411677.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
 gi|329748939|gb|AEC02295.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
          Length = 354

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 184/340 (54%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  + L+ L+ K   P   +++   K LM+ER HL   +  ++ ++         L L
Sbjct: 5   LDSFEKELAGLDMKISSPDTMKDMNLFKSLMQERSHLVPIVEELQHLKHVSSQLEESLAL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++ T + ++ +K EVE      +   +        +  +E+ AG GG E+ 
Sbjct: 65  LKSETDPDMIEMTKEEIEGLKAEVEASTSRTKVLLIPPDPLSGKNIIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE + +K E L +++    GIK     I G + YG L+ E GVHR+ 
Sbjct: 125 LFAADLYRMYTHYAEAKNWKIEILTLNETGLGGIKEVVCSISGKDVYGSLRWESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  +++ +IEI   D ++D  R+ G GGQ VNTTDSAVR
Sbjct: 185 RVPETEAGGRIHTSACTVAVLPEAEET-DIEIRPEDLKVDVMRSGGPGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           +TH+PTG+VV CQ E+SQ KNKA+A  +LR++LY++E +K+ +E A+             
Sbjct: 244 MTHLPTGIVVICQDEKSQIKNKAKALRVLRSRLYDMEEEKKAKERADARRDQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++G L++  +A 
Sbjct: 304 RIRTYNF-PQNRLTDHRINLTLYKLDLIMNGQLEEVTEAL 342


>gi|303283714|ref|XP_003061148.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457499|gb|EEH54798.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 404

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 171/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +++ Q    L  +  DP +  N  E + L +    L + +      ++ + +      +
Sbjct: 49  LESSTQTHKELTFRLADPDVASNAKEFQKLSKALGELTSVVDQYARYKECIEELQEAKAM 108

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   +    +  E++  +       L     D  +  LE+ AG GG E+
Sbjct: 109 VKDAAGDLEMGEMAREEATALNEEMDALEESMTMALLPRDPLDEKNIVLEIRAGTGGDEA 168

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY+R+A+ + +K   L  +  +  G K   + + G + Y  LK E GVHR+
Sbjct: 169 GIWAGDLWRMYSRYADSKGWKASVLTTNPADSGGYKEIVVELVGDSVYSELKWEAGVHRV 228

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS +++ V P V D +E++I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 229 QRVPATESQGRIQTSTATVAVMPEV-DEVEVKIDDKDIELTTARSGGAGGQNVNKVETAV 287

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q KN+ +A  +LR++L+EL++   E+   +    K ++G G 
Sbjct: 288 DLVHKPTGIRIFCTEERTQLKNRIRAMQILRSRLFELQM--EEQAKEVAGRRKAQVGSGA 345

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   E       ++GD+   + A  A+++
Sbjct: 346 RSEKIRTYNYKD-NRVSDHRVG-ENFPLEGFMNGDVSPAIGACQAMEQ 391


>gi|300867105|ref|ZP_07111771.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
 gi|300334860|emb|CBN56937.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
          Length = 365

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 187/352 (53%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q  + L  +  DP + ++  E + + + R  L+  ++  +  ++   +   
Sbjct: 6   LLDKLKSVEQTFNELTRRMADPDVAKDPNEFQRVAKARSSLEEVVNTFELWKETQENLAG 65

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAG 126
             ++  E   D  + +  S  +  ++ + +Y +       L     D  +  LE+ AG G
Sbjct: 66  AKQILKESASDPEMQEMASLEVGELEDKSDYLESRLKVLLLPRDPNDDKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  L+RMY+R+A+ + ++ + L    GE  G K A L I+G + Y  LK E G
Sbjct: 126 GDEASIWAADLVRMYSRYAQSQNWQVKMLSESVGESRGFKEAILEIQGDSVYSKLKFEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P V D +EI I   D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPVTEAGGRVHTSTATVAVMPEV-DDVEIHIDPKDIEMSTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++A  + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L  RE+   +    ++++
Sbjct: 245 ETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKL--REQQDEVTSMRRSQV 302

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y  +      D R   E  S + +L+GD+DD ++A +++ +
Sbjct: 303 GTGSRSEKIRTYNYKD-NRATDHRLG-ENFSLNTILEGDIDDVIQACISLDQ 352


>gi|99080782|ref|YP_612936.1| peptide chain release factor 1 [Ruegeria sp. TM1040]
 gi|119361610|sp|Q1GI42|RF1_SILST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|99037062|gb|ABF63674.1| bacterial peptide chain release factor 1 (bRF-1) [Ruegeria sp.
           TM1040]
          Length = 350

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 178/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +QR  +L     D     ++     L +E   L   +  I   Q  L D     E+
Sbjct: 7   LQQILQRYQYLEAAMAD-GAGGDIA---KLAKEYSDLRPVVEQISAYQQLLSDLAEAEEM 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E    L+    + E+  Q   L   EADS  A LE+  G GG E+  +A
Sbjct: 63  LADPDMKALAEEEIPTLKAALPQAEHALQLALLPKDEADSRAAILEIRPGTGGDEAALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE + +K + +E    E  G+K     I G   +  LK E GVHR+ R+ 
Sbjct: 123 ADLYRMYSRYAETQGWKVDVIEEQASELGGLKELVARINGDGVFARLKYESGVHRVQRVP 182

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 183 VTESGGRIHTSAATVAVLPEA-EDVDIKIDANDLRIDTMRASGAGGQHVNTTDSAVRITH 241

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 242 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDTERSADRASQVGSGDRSERIR 300

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       ++ GDLD+ + A ++
Sbjct: 301 TYNF-PQGRMSDHRINLTLYKLDQIMGGDLDEIIDALIS 338


>gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN]
 gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
 gi|13432207|sp|P45833|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790892|sp|B8ZR31|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae]
 gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
          Length = 361

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 171/351 (48%), Gaps = 15/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N  EA+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A    D S   E    L+    E+  +  + L        +D  LEV +G GG ES  +A
Sbjct: 68  AA--GDESFADEI-AELESRIAELTTQLTDMLAPHDPHGPDDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA---------YGWLKGEQ 185
             L RMY R+AE+  +    L+    +  G K ATL I    A         +  +K E 
Sbjct: 125 ADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRMKFEG 184

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + VYP  ++  E+ I ESD RID YR+SG GGQ VNT
Sbjct: 185 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQGVNT 244

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGVVV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+  
Sbjct: 245 TDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIR 304

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +    +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 305 TVDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADK 354


>gi|315654795|ref|ZP_07907700.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
 gi|315490756|gb|EFU80376.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
          Length = 367

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 169/344 (49%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  DP L  N   A+ + R    L    + ++       D     E+
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQGWLQARDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E        +                D+ D  +E+ AG GG ES  +A 
Sbjct: 71  AGE--DPDFAAEIPGLEAAFEQANADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A++  K           +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VL+GDL   +++ +
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAI 351


>gi|319760481|ref|YP_004124419.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039195|gb|ADV33745.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 360

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 116/335 (34%), Positives = 181/335 (54%), Gaps = 3/335 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R   L    E P+  QN  +   + +E  HL + +++ ++  +   + L   E+  +
Sbjct: 13  LQERFYKLKQLIEHPNHIQNNKDFHSISKEYAHLAHIVTYFEQWLNIQKEILHTKEILTD 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            D   +  +    L  I+  +E K +   L +   D    ++E+ AG GG E+  ++  L
Sbjct: 73  IDLHDLALDELKKLNIIENNLEKKIKILLLPTDPNDKYGCFIELRAGTGGKEAAIFSGEL 132

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTR+AE +++  E +    GE  G K     I    AY  LK E G HR+ R+   +
Sbjct: 133 FRMYTRYAETQRWNIEIIHATYGEYGGYKEIIAKISCNGAYNQLKFESGGHRVQRVPYTE 192

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V P + D     I+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+
Sbjct: 193 SQGRIHTSTCTVAVIPKIPDIKLPNINPNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 252

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYV 316
           G+ V+CQ ERSQHKNK++A ++LR++LY + +++R+ E +N   +         +IR+Y 
Sbjct: 253 GLSVECQDERSQHKNKSKALSILRSRLYAMNIKRRKIEESNFRRNLIGSGDRSDRIRTYN 312

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            Q    V D R +      SDV+DG L   +K  +
Sbjct: 313 FQ-QGRVTDHRIDFTSYKLSDVMDGALGILIKPII 346


>gi|298346212|ref|YP_003718899.1| peptide subunit release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304390026|ref|ZP_07371980.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|298236273|gb|ADI67405.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304326508|gb|EFL93752.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 367

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 169/344 (49%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  DP L  N   A+ + R    L    + ++       D     E+
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E        +                D+ D  +E+ AG GG ES  +A 
Sbjct: 71  AGE--DPDFAAEIPGLEAAFEQANADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A++  K           +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWAVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VL+GDL   +++ +
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAI 351


>gi|83951817|ref|ZP_00960549.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
 gi|83836823|gb|EAP76120.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
          Length = 349

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 122/340 (35%), Positives = 180/340 (52%), Gaps = 16/340 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +QR  F+  +        ++ +   L RE   L   +  I+  +  L        +
Sbjct: 7   LDQILQRFEFIEAQMSAGS--GDIAQ---LGREYAELRPVVEEIRAYRAALDAAEQAEAM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D L+ +K E+    +  Q   L   EAD+  A +E+  G GG E+ 
Sbjct: 62  L---GDPEMRELAEDELRTLKAELPGREKALQLALLPKDEADARPAIIEIRPGTGGEEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE R ++ E +E    E  GIK A + +KG + +  LK E GVHR+ 
Sbjct: 119 LFAGDLLRMYARYAEARGWQFEVIEEAQTELGGIKEAVVHVKGAHVFARLKYESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I I  SD RIDT RASGAGGQHVNTTDSAVR
Sbjct: 179 RVPETESGGRIHTSAATVAVLPEA-EDVDIHIDPSDIRIDTMRASGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+G+VV    E+SQH+N+  A  +L+ +LY+LE QK  +  +   +++   G    
Sbjct: 238 ITHIPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQKVHDARSADRAAQVGSGDRSE 296

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       V+ GDLDD + A 
Sbjct: 297 RIRTYNF-PQGRMTDHRINLTLYKLDQVMAGDLDDIIDAL 335


>gi|222152015|ref|YP_002561175.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
 gi|254790887|sp|B9E8G1|RF1_MACCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222121144|dbj|BAH18479.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
          Length = 358

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   QR   LN    DP +  +  + +   +E+  L   +   +E ++       
Sbjct: 1   MFDQLEIVEQRYEQLNELLSDPDIVSDTDKLREYSKEQADLQETVEVYREYKEVKQQLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
            LE+  E  D    +   + +  +K ++    E  +   +     D  +  +E+   AGG
Sbjct: 61  ALEMMGEASDADEQEMIKEEINTLKPQIPELEERMKLLLIPKDPMDDKNVVMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R++E++ +K E +E ++ +  G K  + +I G  AY  LK E G 
Sbjct: 121 DEANIFAGDLFRMYSRFSEEQGWKIEVMETNEADHGGFKEISFIIIGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS +++ V P V + +EIEI + D RI+TYR+SG+GGQHVNTTD
Sbjct: 181 HRVQRIPTTESGGRIHTSTATVAVLPEV-EDVEIEIRQEDLRIETYRSSGSGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+V     E+SQ KN+ +A  +L+ ++++ +L  +EE A   E  K+ +G
Sbjct: 240 SAVRITHIPTGIVATSS-EKSQIKNREKALKLLKTRVFDAKL--QEEQAKYSEQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L + + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLGEIIDALTIAEQ 346


>gi|148656981|ref|YP_001277186.1| peptide chain release factor 1 [Roseiflexus sp. RS-1]
 gi|148569091|gb|ABQ91236.1| bacterial peptide chain release factor 1 (bRF-1) [Roseiflexus sp.
           RS-1]
          Length = 364

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 174/349 (49%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N   R + L      P +  + +  +  +RE++ L+  +   +  +D          L
Sbjct: 9   LANVAARYNELLDLMAQPEIATDPVRLQQYVREQRDLEPLVEAYQAYRDVERQIEDTRFL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + Q   + L  +       + +     L     DS +  +E+  G GG E+ 
Sbjct: 69  LANETDPEVRQLAQEELDHLIERRARLETDIKVLLLPRDPNDSKNVIMELRQGEGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE+R +  + +   +    G K     IKG  AY  LK E GVHR+ 
Sbjct: 129 LFAADLFRMYTRYAEQRGWDVDVISATENGPGGYKEIVFEIKGEGAYSRLKYEGGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P ++++ EIE++ SD R+D +R+SG GGQ VNTTDSAVR
Sbjct: 189 RVPATEARGRIHTSTATVAVLPEIEET-EIELNPSDYRVDVFRSSGHGGQGVNTTDSAVR 247

Query: 252 ITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           I +    P  +VV CQ  RSQ KNKA A  +LRA+LY  E +KR     +GES   ++G 
Sbjct: 248 IVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRR--KELGESRLAQVGA 305

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G    +IR+Y   P   V D R     ++   +LDGDLD  + A +   
Sbjct: 306 GERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGILDGDLDRLIDALIIAD 353


>gi|326332906|ref|ZP_08199163.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
 gi|325949264|gb|EGD41347.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
          Length = 359

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 181/351 (51%), Gaps = 16/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  +P    +   AK L +    L + I   +  Q    D     EL
Sbjct: 7   VEGLIEEHEGLEKRLAEPETHADARLAKKLNQRYAELSSIIDAYRSWQQLGDDIEAAREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D +  +E    + + +   E  +   +     D  DA LEV +G GG ES  +A 
Sbjct: 67  AGE--DPAFAEEAEALVPQREAAEERLRRLLVPRDPTDDKDAILEVKSGEGGEESALFAG 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMYTR+AE++ +K E L+  + +  G KS T+ +K       G   Y  LK E GVH
Sbjct: 125 DLLRMYTRYAERQGWKLEFLDATESDLGGYKSVTVAVKAKGNPEPGRAPYALLKFEGGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI+++D RID YR+SG GGQ VNTTDS
Sbjct: 185 RVQRVPVTESQGRVHTSAAGVLVVPEA-EPVDVEINDNDLRIDVYRSSGPGGQSVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITHIPTG+VV  Q E+SQ +NK QA  +LR++L +      +  A+    S+   + 
Sbjct: 244 AVRITHIPTGIVVSMQNEKSQLQNKEQAMRVLRSRLLQAAQDAADAEASDARRSQVRTVD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM----KATLAIK 354
              +IR+Y   P   + D RT  +  +   VLDGDL+  +     A LA +
Sbjct: 304 RSERIRTYNF-PENRISDHRTGYKSYNLDQVLDGDLEPVIGSAVDADLAAR 353


>gi|288922982|ref|ZP_06417139.1| peptide chain release factor 1 [Frankia sp. EUN1f]
 gi|288345658|gb|EFC80030.1| peptide chain release factor 1 [Frankia sp. EUN1f]
          Length = 356

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 173/348 (49%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + +   + +  +  DP +  +   A+ L R    L   +     ++    D     EL
Sbjct: 5   LASMIAEHADIEKRLADPAIHNDPSVARELSRRYAELATPVDLALRLESVEGDLEAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  E D S   E +             +   + +   DS DA LEV AGAGG ES  +A 
Sbjct: 65  A--EQDASFRDEITALEDSRAELASRLRAYLVPTDPDDSRDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AE+R ++TE L+ +  +  G +  ++ +K       G   +G L+ E GVH
Sbjct: 123 DLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKARGSAGPGQGVFGRLRFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   D        +D RID +R+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLPEAADVDVDV-DPNDLRIDVFRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTGVVV CQ E+SQ +NK  A  +LR++L     +K E  A    +S+   + 
Sbjct: 242 AVRITHLPTGVVVSCQNEKSQLQNKESAMRILRSRLLAAAREKAESEAAAARASQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N +  +   VLDGDLD  + A +   +
Sbjct: 302 RSEKIRTYNF-PENRISDHRINYKAHNLEQVLDGDLDAVVDALIEADQ 348


>gi|269468531|gb|EEZ80185.1| Protein chain release factor A [uncultured SUP05 cluster bacterium]
          Length = 363

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 114/352 (32%), Positives = 185/352 (52%), Gaps = 21/352 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL----- 70
            +    RL  +     DP +  +  + + L  E   L       ++      D       
Sbjct: 9   LEQLSMRLEEVGALLSDPDVAADQNKFRELSIEHAQLTPINEQFEKYLSTQKDIESSEEM 68

Query: 71  ------ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
                  +  +A EE     + E  + L+ + LE++      L     DS +  +E+ AG
Sbjct: 69  LLEDDEEIKTMAKEE-----ITEGKEKLEYLDLELKKA---LLPKDPNDSRNIIIEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  ++  L RMY+R+ EK+K++ EA+  + G+  G K     I G N Y  LK E
Sbjct: 121 TGGDEASIFSGDLFRMYSRYVEKQKWQMEAMSSNIGDHGGFKEVIARISGTNVYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS  ++ + P V++  E++I+ SD RIDT+RASGAGGQHVN
Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTVAIMPEVENIEEVDINMSDVRIDTFRASGAGGQHVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVR+THIPTG VV+CQ  RSQHKNKAQA ++L +++ + + Q++++   +      
Sbjct: 241 KTDSAVRVTHIPTGTVVECQDGRSQHKNKAQALSVLASRILDAQQQEQQKEQALTRKELI 300

Query: 305 EIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G   ++IR+Y   P   + D R N+     ++V++GDL+  ++  +  ++
Sbjct: 301 GSGDRSQRIRTYNY-PQGRITDHRINLTLYKLAEVMEGDLEAIIEPLIVEQQ 351


>gi|260467160|ref|ZP_05813338.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
 gi|259029084|gb|EEW30382.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
          Length = 359

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 178/343 (51%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  V+R   L  +    P           +  E   L   ++ ++ ++    +   L  +
Sbjct: 10  DQVVKRFEMLEAQMSAGPA----PDAYVKMASEYAELQEMVAKVRALRSAEHEQADLEAM 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++  D  +      +L  ++  +E      Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  LADKGTDAEMRALAEADLPGVEERIEALQKDIQLLLLPRDAADDKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +  ++ E +   DG+  G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEHGWRFETVSASDGDAGGFKEIIATISGRGVFAHLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++I+I   D RIDT RASG+GGQHVNTTDSAV
Sbjct: 186 QRVPATEASGRIHTSAATVAVLPEA-EEVDIDIRAEDIRIDTMRASGSGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+PTG++V  Q E+SQH+N+A+A  +LRA+LY++E  K +E  +    S+   G   
Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDMERSKADEERSEARKSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V+ G+LD+ + A +A
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEVIDALIA 345


>gi|220913097|ref|YP_002488406.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
 gi|254790860|sp|B8HB03|RF1_ARTCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219859975|gb|ACL40317.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
          Length = 357

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +     +  +  DP ++ +   A+ L R    L+  +      +    D     E+A 
Sbjct: 7   GLLDEHDSIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHRWEGLRDDLSAAREMAA 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E  D     E  +    ++      +   +     D+ +  LEV  G GG E+  +A  L
Sbjct: 67  E--DPEFAAEVPELEASLETAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAALFAGDL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRLV 191
           LRMYTR+AE R +KTE +   + +  G K   + +KG         Y  LK E GVHR+ 
Sbjct: 125 LRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGSSNDPAEGVYARLKFEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           ITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +   +   +S    +    
Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAANSEQRKSQIRTMDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  +   V++GDL+  +++ + + 
Sbjct: 305 RIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347


>gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 358

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I    ++     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMADPEVASDQNQFRKLSKRYAELRPIIVVHTQLTQAKEDLSDAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ D    Q+ ++ L+ + LE+E +  + L    E DS D  +E+ AGAGG E+  +A
Sbjct: 68  AYEDHD---FQDEAERLEGVVLELEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+A+K  F  E + I++ +  G+K  T+  K        A+   K E GVHR
Sbjct: 125 ADLARMYERYADKSGFSWEVIGINESDLGGVKDMTITFKSKTPSRDGAWSVFKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  D+  E+ I E D R+D YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVHIDEKDLRVDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           VR+TH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A     S    +  
Sbjct: 245 VRLTHLPTGLVVTCQRERSQIQNKARAMQVLQARLEQMEREAREAEAGEQRASQVRTMDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDGD+   + A  A ++
Sbjct: 305 SERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMGSLIDALQAQER 350


>gi|120434841|ref|YP_860527.1| peptide chain release factor 1 [Gramella forsetii KT0803]
 gi|166223562|sp|A0LYL5|RF1_GRAFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117576991|emb|CAL65460.1| peptide chain release factor 1 [Gramella forsetii KT0803]
          Length = 358

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 166/341 (48%), Gaps = 7/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   +N     P +  +      L +E + L   +   ++      +     E+  +
Sbjct: 8   VKQRFDEVNDLIIQPDVISDQKRYIELNKEYKDLRALMDEREKYISITDNIQEAEEIISD 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  + +     L   K ++   +       +     D  +  +E+ AG GG E+  +A
Sbjct: 68  GSDPEMTEMAKLQLDEAKGQLPALEDKIRMMLIPKDPEDGKNIVMEIRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E R +    ++  +G   G K     + G + YG +K E GVHR+ R+ 
Sbjct: 128 GDLYRMYTKYVEGRGWSHNIVDFSEGTSGGFKEMIFEVSGDDVYGTMKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   +  ++EI   + RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVLPEA-EEFDVEIDPKEVRIDYFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K+ E      +S    G    +IR
Sbjct: 247 EPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKMEADAAKRNSMVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y       V D R N+     S++++GD+   +      +
Sbjct: 307 TYNYA-QSRVTDHRINLTLYDLSNIINGDIQKIIDELQLAE 346


>gi|325963840|ref|YP_004241746.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469927|gb|ADX73612.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 357

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 10/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +     +  +  DP ++ +   A+ L R    L+  +    + +    D     E+A 
Sbjct: 7   GLLDEHDAIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHKWEGIRDDLAAAKEMAS 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E  D     E  +    ++      +   +     D+ +  LEV  G GG E+  +A  L
Sbjct: 67  E--DPEFAAEVPELEASLEEAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAALFAGDL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRLV 191
           LRMYTR+AE R +KTE +   + +  G K   + +KG         Y  LK E GVHR+ 
Sbjct: 125 LRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGNSNDPAEGVYARLKFEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ + E +   +S    +    
Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAENSAQRKSQIRTMDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  +   V++GDL+  +++ + + 
Sbjct: 305 RIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347


>gi|332712139|ref|ZP_08432067.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
 gi|332348945|gb|EGJ28557.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
          Length = 370

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  Q    L  +  DP +  +  E + + + R  L+  ++     +    D     ++
Sbjct: 10  LNSVEQTYHELTRRLADPDIATDPNELQRVAKARASLEEVVATYDNWKKTQEDLAGARQI 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
             E   +  + +  +  ++ ++ +VE+ + E     L     D  +  LE+ AG GG E+
Sbjct: 70  LKESTGEPEMQEMAALEVEELQTKVEHLERELKILLLPKDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R++E + ++ + L     +  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYSESQNWRVKLLSESLADMGGFKEAILEIQGEQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P V D +++EI   +  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAVMPEV-DEVDVEIDPKEIEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++LQ+++E       ++   G   
Sbjct: 249 DLYHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLQEQQEAVTSMRRAQVGTGARS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +    V D R   +  S + +L+GDL+  ++A ++  +
Sbjct: 309 EKIRTYNYKD-NRVTDHRLG-QNYSLAPLLEGDLEGLIQACISQDQ 352


>gi|149369846|ref|ZP_01889697.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
 gi|149356337|gb|EDM44893.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
          Length = 358

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 101/337 (29%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R   ++     P +  +  +   L +E + L+  +   +             E+  +
Sbjct: 8   VKNRFDEVSDLIIQPDVISDQKQYISLTKEYKDLNALMKKREAYIMATEHIAEAEEILAD 67

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +++     +   K  +    E  +   +     D+ +A +E+ AG GG E+  +A
Sbjct: 68  GSDADMVEMAKMQMDEAKSNIAVLEEEIKLMLIPKDPEDAKNAVMEIKAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + +KT  ++  +G   G K+  + ++G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLHRMYTKYCESKGWKTSVVDFSEGTSGGYKAIQMEVEGDDVYGTLKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V+P   +  ++ I   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVFPEA-EEFDVHIEMKDVRIDYFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++    +   S+   G    +IR
Sbjct: 247 VPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQAEDALKRGSQVTSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y       V D R N+     S+++DGD+   +   
Sbjct: 307 TYNYS-QGRVTDHRINLTLYDLSNIIDGDIQKIIDEL 342


>gi|159027581|emb|CAO86953.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 366

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP +  N  E   L + R  L+  ++  +  Q    D +   ++
Sbjct: 10  LQSVEQTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIGAKQI 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +  +  +  ++ ++   +       L     D  +  LE+ AG GG E+
Sbjct: 70  FKESASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+R+Y+++AE + +K   L     +  G K A L IKG N Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPLTEASGRVHTSTATVAIMPEV-DDVEVHIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLY+++LQ+++E  +    S+   G   
Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQEAVSSMRRSQVGTGSRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +  ++  D R N E  S   +LDGD++D +++ +A  +
Sbjct: 309 EKIRTYNYKDNRL-TDHRLN-ENFSLDRILDGDIEDVIQSCIAKDQ 352


>gi|256833004|ref|YP_003161731.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
 gi|256686535|gb|ACV09428.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
          Length = 361

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 172/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  D  +  +   A+ L R    L   +S  +  +    D     ++
Sbjct: 8   VEPLLGEYADIEAQLSDASVHSDQARARQLGRRYAELGQVVSAYRAWRSATDDLDAARDM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  E+D S  +E            E  +   +     DS D  LE+ AG GG ES  +A 
Sbjct: 68  A--EEDPSFAEEIPAMEHAAAEASERLRRVLIPRDPDDSRDVILEIKAGEGGAESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMY R+AE++ ++TE +   + +  G K   + +K           +  LK E GVH
Sbjct: 126 DLLRMYLRYAERQGWRTEIIGATESDLGGYKDVQVAVKARGQVTPEEGVWAHLKYEGGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   + V+P V+D  E+EI ++D RID YR+SG GGQ VNTTDS
Sbjct: 186 RVQRVPVTESQGRIHTSAVGVLVFPEVEDEGELEIDQNDLRIDVYRSSGPGGQSVNTTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIG 307
           AVRITHIPTG+VV  Q E+SQ +N+ QA  +LRA+L    + +      ++  S    + 
Sbjct: 246 AVRITHIPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAAQDMRRSQVRTVD 305

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VLDGD+   +++ +
Sbjct: 306 RSERIRTYNF-PENRIADHRTGFKSYNLDQVLDGDVQPVVQSAI 348


>gi|170746587|ref|YP_001752847.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
 gi|226739115|sp|B1M766|RF1_METRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170653109|gb|ACB22164.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
          Length = 361

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +     +  +      L RE   LD  ++ I+  +  L +   +  L
Sbjct: 9   LDAILARHDIVTAQLASGEI--DPETVVQLSRELSDLDPVVAAIRAYRAALENLAGVEAL 66

Query: 76  ALEED-DCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +    ++     L  ++      Q   L    AD   A LEV AG GG E+
Sbjct: 67  IDEPGTDPEMRALAAEEKPEALAALETAHRALQLLLLPKDAADEKSAILEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE + ++ E +   +G   G +     +KG   +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGFREVVAEVKGRGVFARLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I ++++D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLPEA-EEVDIHVNDADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITH+PTG+VV  Q+ERSQHKN+A+A  +LRA+LYE E   ++   A   ++        
Sbjct: 246 RITHLPTGIVVFVQEERSQHKNRARAMALLRARLYEAERNAKDSARAADRKAQVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ G  LD+ + A + 
Sbjct: 306 ERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGTALDEVVDALIT 348


>gi|251771816|gb|EES52391.1| peptide chain release factor 1 [Leptospirillum ferrodiazotrophum]
          Length = 362

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 185/345 (53%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L+ K   P + ++    + L  ++  L   +    + +    +     EL
Sbjct: 15  LQSMRDRFDELSGKMASPEIARSPDLYRKLAMDQAELAPVVELYDQWKRLRKEQE---EL 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +  S   +R++  +E  +       L   + D  + ++E+ AGAGG E+ 
Sbjct: 72  DLIRDDPQMAELVSGEDRRLREVLEGTELRLVDAILPKDQRDERNLFIEIRAGAGGEEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+ E++ F+ E +E ++ +  G K   + ++G NA+  LK E GVHR+ 
Sbjct: 132 LFAAELGRMYLRFVERQGFRAEVMESNETDIGGSKEFIIYVQGRNAFSRLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ + P   + +E++I + D RIDT+ +SGAGGQ VNTT SAVR
Sbjct: 192 RVPVTEAGGRIHTSTVTVAILPEASE-VEVDIEQKDLRIDTFCSSGAGGQSVNTTYSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITHIP+G+VV CQ ERSQ KN+ +A ++LR++L E E+ ++ +EIA+  ++         
Sbjct: 251 ITHIPSGIVVSCQDERSQLKNRTKAMSVLRSRLLEQEVSRQNQEIASQRKTLVGSGDRSE 310

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G+L+  + A  A  +
Sbjct: 311 RIRTYNF-PQNRVTDHRIGLTLYQLDRVMEGELEPLVDALRAHDR 354


>gi|262277365|ref|ZP_06055158.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
 gi|262224468|gb|EEY74927.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
          Length = 248

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 167/244 (68%), Positives = 202/244 (82%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           +SG+AD  D YLEVHAGAGGTESQDWA+M+ +MY +W+EK     E +    GEEAGIKS
Sbjct: 1   MSGDADKFDCYLEVHAGAGGTESQDWADMIRKMYLKWSEKTDRSCELISESKGEEAGIKS 60

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           +T+ I G N++G+LK E GVHRLVRISP+DSN RRHTSF+S+WVYPV+DD IEIEI E D
Sbjct: 61  STIKIGGLNSFGYLKNESGVHRLVRISPFDSNQRRHTSFASVWVYPVIDDKIEIEIKEKD 120

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+DTYR+SGAGGQHVNTTDSAVRITH+PT +VVQCQ ERSQHKNK  A  ML+++LYEL
Sbjct: 121 LRVDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVQCQNERSQHKNKDTAMKMLKSRLYEL 180

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           EL+KREE A   E SKT+IGWG QIRSYVLQPYQ+VKD RTN+E TSP DVL+G++ +F+
Sbjct: 181 ELKKREESAQSAEDSKTDIGWGHQIRSYVLQPYQLVKDNRTNVESTSPDDVLNGEIGEFL 240

Query: 348 KATL 351
           ++ L
Sbjct: 241 ESAL 244


>gi|13472970|ref|NP_104537.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
 gi|20139342|sp|Q98G93|RF1_RHILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14023718|dbj|BAB50323.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
          Length = 359

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 181/343 (52%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  V+R   L  +    P           +  E   L + ++ +++++    +   L  +
Sbjct: 10  DQVVKRFEMLEAQMSAGPA----PDAYVKMASEYAELQDMVAKVRQLRSAEHEQADLEAM 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++  D  +      +L  ++  +E      Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  LADKGTDAEMRALAEADLPDVEERIEALQKDIQILLLPKDAADDKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +R ++ E +   DG+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIATVSGKGVFAHLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++IEI   D RIDT RASG+GGQHVNTTDSAV
Sbjct: 186 QRVPATEASGRIHTSAATVAVLPEA-EEVDIEIRAEDIRIDTMRASGSGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+PTG++V  Q E+SQH+N+A+A  +LRA+LY+LE  K +E  +    S+   G   
Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERSKADEERSESRKSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V+ G+LD+ + A +A
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIVDALIA 345


>gi|116671165|ref|YP_832098.1| peptide chain release factor 1 [Arthrobacter sp. FB24]
 gi|166223528|sp|A0JY78|RF1_ARTS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116611274|gb|ABK03998.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter sp.
           FB24]
          Length = 357

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 10/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +   + +  +  DP ++ +   A+ L R    L+  +      +    D     E+A 
Sbjct: 7   GLLDEHAAIQAQLGDPAVYADQKLARKLGRRSAQLNGIVEAYHRWESIRDDLAAAKEMA- 65

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            ++D     E  +    ++      +   +     D+ +  LEV  G GG E+  +A  L
Sbjct: 66  -DEDPEFAAEVPELEASLETAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAALFAADL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRLV 191
           LRMY+R+AE R +KTE +   + +  G K   + +KG         Y  LK E GVHR+ 
Sbjct: 125 LRMYSRYAESRGWKTELISATESDLGGYKDVQMAVKGNSNDPAEGVYARLKFEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ + E +   +S    +    
Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAENSAQRKSQIRTMDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  +   V++GDL+  +++ + + 
Sbjct: 305 RIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347


>gi|126664153|ref|ZP_01735146.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
 gi|126623867|gb|EAZ94562.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
          Length = 285

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 131/270 (48%), Positives = 195/270 (72%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
             +E     Q     +E  +F ++LS E DS  A L++ AGAGGTES DWA+ML+RMY  
Sbjct: 10  TEEEVETQYQHTLSHIEDLEFRNMLSDEGDSMSAVLQITAGAGGTESCDWASMLMRMYLM 69

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W EK+ +K + L   +GE AGIK+ TL  +G  A+G+LKGE GVHRLVRISP+DSN++RH
Sbjct: 70  WGEKQGYKIKELNFQEGEVAGIKTVTLEFEGDFAFGYLKGENGVHRLVRISPFDSNAKRH 129

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S++VYP+VDD+IEI+I+ +D  I T R+SGAGGQ+VN  ++ V++ H PTG+ +QC
Sbjct: 130 TSFASVYVYPLVDDTIEIDINPADIEIITSRSSGAGGQNVNKVETKVQLFHKPTGIQIQC 189

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
            + RSQ  N+ +A  ML+++LYE+EL+K++   +  E+ K +I WG QIR+YV+ PY++V
Sbjct: 190 SETRSQQDNRQRAMQMLKSQLYEIELKKQQAQRSDIEAGKMKIEWGSQIRNYVMHPYKLV 249

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KD+R+  E +    +++G++D+F+KA L +
Sbjct: 250 KDVRSGHESSDVEGIMNGEIDNFLKAYLMM 279


>gi|330723258|gb|AEC45628.1| peptide chain release factor 1 [Mycoplasma hyorhinis MCLD]
          Length = 383

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 175/347 (50%), Gaps = 13/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            ++  ++   L+ +  DP +  N+ E   + +E   +++ +   K    +   + D+  L
Sbjct: 31  LNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVSIIEDSKKL 90

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGT 128
           L+    E D  I     + +     ++E  + E     L   E D  +  +E+   AGG 
Sbjct: 91  LQ----EKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAGGD 146

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L +MY +WAE +K+  + L        G      L+ G   Y  LK E GVH
Sbjct: 147 EANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESGVH 206

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   ++  R HTS +++ + P VDD I+++I   D RIDTYR+SGAGGQ VNTTDS
Sbjct: 207 RVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTTDS 266

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+V   Q  RSQ  NK  A  +L++K+Y LE++K++ I             
Sbjct: 267 AVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKLAGSGAR 326

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R +   +   +V+ G+LD  + A LA  K
Sbjct: 327 SEKIRTYNY-PQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDK 371


>gi|282898327|ref|ZP_06306318.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
 gi|281196858|gb|EFA71763.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
          Length = 364

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 185/348 (53%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP   ++  E + + + R  L+  ++  +  ++   + +   ++
Sbjct: 10  LKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVTAYETWKNSQEELVGARQI 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E + D  + +  +  ++ ++ ++E+ +       L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNGDPELHEMATIEVKDLESKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + +K + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWKVKLVSESPGEMGGFKEVILEIQGNSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMPEV-DDVEVHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L  RE+   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKL--REQQEAVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  + S VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKDS-RATDHRLG-QNFTLSPVLEGDLEILIQSCISQDQ 352


>gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
 gi|81558450|sp|Q5LQM7|RF1_SILPO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56679049|gb|AAV95715.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
          Length = 351

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/339 (35%), Positives = 175/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR  +L     D     ++     L +E   L   +  I   +    D      +
Sbjct: 7   LDQITQRFQYLEAAMADGASGSDIA---ALAKEYSDLRPVVEQIAAWRQLCADMDEARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E    L+    E E   Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LSDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E+ + E  GIK     I G N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D ++I+I   D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLPEAQD-VDIQIDPGDIRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +P+G+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +   +   S++   G    +IR
Sbjct: 243 LPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRLDRERSASRSAQVGTGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 302 TYNF-PQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAA 339


>gi|111114896|ref|YP_709514.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|216263773|ref|ZP_03435767.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
 gi|110890170|gb|ABH01338.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|215979817|gb|EEC20639.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
          Length = 269

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 137/266 (51%), Positives = 186/266 (69%), Gaps = 1/266 (0%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                 ++ + +     S    E D+NDA+L +H+GAGGTE+ DW  ML RMY+R+AE++
Sbjct: 2   EIEFNILEKQYKDLLTISYFKEELDANDAFLTIHSGAGGTEACDWVAMLYRMYSRYAERK 61

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+S
Sbjct: 62  KYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFAS 120

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ PV+D+ IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +RS
Sbjct: 121 VFIDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRS 180

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD RT
Sbjct: 181 QHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRT 240

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
             E ++ + V+DG++D+F++  L  K
Sbjct: 241 KFENSNITSVMDGNIDNFIEEYLKWK 266


>gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae]
          Length = 357

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 171/351 (48%), Gaps = 15/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N  EA+   R    L   ++  +++     D     EL
Sbjct: 4   IDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTAREL 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A    D S   E    L+    E+  +  + L        +D  LEV +G GG ES  +A
Sbjct: 64  AA--GDESFADEI-AELESRIAELTTQLTDMLAPHDPHGPDDIVLEVKSGEGGEESALFA 120

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA---------YGWLKGEQ 185
             L RMY R+AE+  +    L+    +  G K ATL I    A         +  +K E 
Sbjct: 121 ADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRMKFEG 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + VYP  ++  E+ I ESD RID YR+SG GGQ VNT
Sbjct: 181 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQGVNT 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGVVV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+  
Sbjct: 241 TDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIR 300

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +    +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 301 TVDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADK 350


>gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 238

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 135/236 (57%), Positives = 174/236 (73%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + +HAGAGG E+ DWA ML+RMYTR+ E+R FK +  ++++ E  GIKSAT+ IKG  AY
Sbjct: 1   MVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI   D RIDTYRASGA
Sbjct: 61  GYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGA 120

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL +++ ++  E    
Sbjct: 121 GGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIED 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+ A LA K
Sbjct: 181 IQGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 236


>gi|163756580|ref|ZP_02163692.1| peptide chain release factor 1 [Kordia algicida OT-1]
 gi|161323474|gb|EDP94811.1| peptide chain release factor 1 [Kordia algicida OT-1]
          Length = 357

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 168/341 (49%), Gaps = 7/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   +N     P +  +      L +E + L   +      ++ L +     E+  +
Sbjct: 8   VKQRFDEVNDLIIQPDIIADQKRYVQLNKEYKDLKILVEKRDVYKELLDNISEAEEIIAD 67

Query: 79  EDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +++     +   K  +    ++ + LL      DS +  +EV AG GG E+  +A
Sbjct: 68  GSDAEMVEMAKIQMDEAKAALPALEEEIKVLLIPKDPEDSKNVVVEVRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E R +    ++  +G   G K     + G + YG +K E GVHR+ R+ 
Sbjct: 128 GDLHRMYTKYCEGRGWNVSVVDYSEGTSGGFKEIIFEVSGEDVYGTMKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   +  ++E+  +D RI+   ++G GGQ VNTT SA+R+ H
Sbjct: 188 QTETQGRVHTSAATVMVLPEA-EEFDVELDMNDVRIERTTSTGPGGQSVNTTYSAIRLHH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            P+G+VV CQ ++S HKN  +A  +LR++LYE EL+K+    +    S    G    +IR
Sbjct: 247 GPSGLVVSCQDQKSSHKNLEKALKVLRSRLYEKELEKKLAADSARRKSMVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R  +     S++++GD+   +   + ++
Sbjct: 307 TYNY-PQGRVTDHRIGLTLYDLSNIMNGDIQKIIDELMLVE 346


>gi|32423703|gb|AAP81246.1| peptide chain release factor [Candidatus Portiera aleyrodidarum]
          Length = 297

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 148/294 (50%), Positives = 205/294 (69%), Gaps = 2/294 (0%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           K +++ + +N  LL LA+ E D   L     ++   + E+       L SG+ D N+AY+
Sbjct: 2   KTVENGIYNNAELLHLAITELDSKPLSFIKQDINFFEKELAKLDAVRLFSGDFDKNNAYV 61

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG+GG ESQDWANMLLRMY+RWA    FKTE + ++ G+  G+KSATL IKG  A+G
Sbjct: 62  EIKAGSGGVESQDWANMLLRMYSRWAVTHDFKTETVNLNIGDLLGVKSATLHIKGDYAFG 121

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGA 238
           W++ E+G+HRLVR SP+DS+ RRHTSF+S++VYP +   +  I+I+ ++ RIDTYR+SGA
Sbjct: 122 WMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITMKVHNIKINTNELRIDTYRSSGA 181

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITH+PT +VV+CQ ERSQH NK +A  +L+ KLY+ + +K E     
Sbjct: 182 GGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERIN 241

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            E  K  I WG QIRSYVL   Q +KDLRT ++  +   VL+G+LD F++A++ 
Sbjct: 242 IEKKKAGICWGNQIRSYVL-DAQRIKDLRTGVKNNNCEKVLNGELDLFIEASIK 294


>gi|229032803|ref|ZP_04188759.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
 gi|228728476|gb|EEL79496.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
          Length = 272

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 138/262 (52%), Positives = 178/262 (67%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L   +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 5   GFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 64

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 65  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 185 EFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 244

Query: 274 AQAWNMLRAKLYELELQKREEI 295
             A  ML+AKLY+ +L++++  
Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAE 266


>gi|224534432|ref|ZP_03675010.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
 gi|224514534|gb|EEF84850.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
          Length = 357

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 132/342 (38%), Positives = 206/342 (60%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  +  K +D +L +N  +   +++E  HL+   +     ++I +++ DN  +
Sbjct: 6   LNSATSKIKSIEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILNQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQ 131
           LE   +++   ++++   +L + K EVE++    LL   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEEVEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYGMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|24379522|ref|NP_721477.1| peptide chain release factor 1 [Streptococcus mutans UA159]
 gi|32171546|sp|Q8DU64|RF1_STRMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24377463|gb|AAN58783.1|AE014946_8 putative peptide chain release factor 1 [Streptococcus mutans
           UA159]
          Length = 359

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIADAQEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K+  E  +    F  L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G+K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 350


>gi|304373116|ref|YP_003856325.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309307|gb|ADM21787.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
          Length = 361

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 175/347 (50%), Gaps = 13/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            ++  ++   L+ +  DP +  N+ E   + +E   +++ +   K    +   + D+  L
Sbjct: 9   LNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVSIIEDSKKL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGT 128
           L+    E D  I     + +     ++E  + E     L   E D  +  +E+   AGG 
Sbjct: 69  LQ----EKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L +MY +WAE +K+  + L        G      L+ G   Y  LK E GVH
Sbjct: 125 EANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   ++  R HTS +++ + P VDD I+++I   D RIDTYR+SGAGGQ VNTTDS
Sbjct: 185 RVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+V   Q  RSQ  NK  A  +L++K+Y LE++K++ I             
Sbjct: 245 AVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKLAGSGAR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R +   +   +V+ G+LD  + A LA  K
Sbjct: 305 SEKIRTYNY-PQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDK 349


>gi|167752837|ref|ZP_02424964.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
 gi|167659906|gb|EDS04036.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
          Length = 315

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 121/311 (38%), Positives = 186/311 (59%), Gaps = 11/311 (3%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             +   +     +   + D  ++ E   E       QE  +   R    +E  +  ++L 
Sbjct: 2   AGIKAWVEEYDAVVKEVEDLRLMPEFVKEG--VVTEQELDEQYARAMHRIEELELRNMLR 59

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            + D   A +++++GAGGTE+ DWA MLLRMYTRW E   +K + L+   GEE G+KS T
Sbjct: 60  RDEDRMGAIMDINSGAGGTEALDWAGMLLRMYTRWGEAHGYKVKVLDYQAGEEVGVKSCT 119

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           L  +G  AYG+LK E GVHR+VR+SP+++N++R T+F+S++V P +DD+IEI ++ +D  
Sbjct: 120 LEFEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAIDDTIEITVNPADIE 179

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLR 281
            DT+R+SGAGGQ+VN  ++AVR+ +         P   +++  + RSQ  N+  A  +L+
Sbjct: 180 WDTFRSSGAGGQNVNKVETAVRLRYHGKDADTGEPIEYLIENMETRSQLMNRENAMRILK 239

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +KLY+ EL KR       E++K  I WG QIRSYV    + VKD RT ++ +    V+DG
Sbjct: 240 SKLYQRELDKRMATQQALEATKKRIEWGSQIRSYVFDD-RRVKDHRTGVQTSDVEGVMDG 298

Query: 342 DLDDFMKATLA 352
           DLD+F+KA L 
Sbjct: 299 DLDEFIKAYLM 309


>gi|23015680|ref|ZP_00055449.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 183/343 (53%), Gaps = 6/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +D  + R   +  +        +    + L +E   LD  ++ +   +    D +   E+
Sbjct: 7   FDKVLYRHDEVRAQLSSGDGL-DSQTIQRLSKELSELDPVVTAVVAFRKAREDMVQAAEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+     +E + Q   L   EAD  +A +EV AG GG E+  +A
Sbjct: 66  MNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A    ++ E ++++D    G+K A+  I G N +  LK E GVHR+ R+ 
Sbjct: 126 AELFRMYERYASVHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P   + ++I++++SD R D YR+ G+GGQ VNTTDSAVR+TH
Sbjct: 186 ATESQGRIHTSAATVAIMPEA-EEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG+ V CQQE+SQHKNKA A  +LRA+LYE E   ++        S+   G    +IR
Sbjct: 245 IPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +Y   P   V D R N+       V+ GD LD+ ++A +A  +
Sbjct: 305 TYNF-PQGRVTDHRINLTLYKIDAVMSGDALDELIEALVAADQ 346


>gi|301165960|emb|CBW25534.1| peptide chain release factor 1 [Bacteriovorax marinus SJ]
          Length = 357

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 172/347 (49%), Gaps = 9/347 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  D  ++R   L  K  DP ++    E K +  ER +L+  +   KE +    D  
Sbjct: 2   SMFDKLDAVIERFETLTEKLADPTIYDRQDEFKKISSERSNLEEVVVAYKEYRQMKEDID 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              E+   E D  + +   + +   + ++   +       L     D  +  +E+ AGAG
Sbjct: 62  EAKEILKNEKDEDMKEMAKEVIAENEPQIPEMEERLTILLLPKDPLDDKNVMMEIRAGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   + RMY+ +     FK E + I +G+E GIK     + G   Y  LK E G
Sbjct: 122 GDEASIFVGDVYRMYSNYFRDLGFKVEQVSISEGDE-GIKEIIFSVSGEKVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P   D +E ++  +D RID YR+ GAGGQ VNTT
Sbjct: 181 VHRVQRVPKTESQGRVHTSTITVAVMPE-TDDVEFDLDMNDVRIDVYRSGGAGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTE 305
           DSAVR+THIPTG VV  Q ++SQ KNK +A  +L+ ++Y+  LQ++    A   +     
Sbjct: 240 DSAVRVTHIPTGTVVANQDQKSQLKNKEKALRILKNRIYDKMLQEKNAAEAAERKGLVGT 299

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                +IR+Y   P   + D R  +   S   +++GD+     A +A
Sbjct: 300 GDRSERIRTYNF-PQGRLTDHRIGLTLYSLDKIIEGDMTPVTDALIA 345


>gi|313899685|ref|ZP_07833188.1| peptide chain release factor 1 [Clostridium sp. HGF2]
 gi|312955300|gb|EFR36965.1| peptide chain release factor 1 [Clostridium sp. HGF2]
          Length = 357

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +N     P +  +      L RE+  L   +    E ++ +        L
Sbjct: 8   LEGMVNRYHEINEMMMSPEIVTDSRMLAKLGREQADLTQVVETYTEYKNSVSALEDAKAL 67

Query: 76  ALEEDDC--SILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            LE+D     + +   + L+ +I+  +E  +   +     DS++A +E+   AGG E   
Sbjct: 68  LLEDDKEIKEMAKMEIEELEPKIEEYLEKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + +K E +E+ D E  G    + ++KG   YG LK E G HR+ R
Sbjct: 128 FAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P + +  + +I  +D  ++T RASGAGGQH+N TDSAVRI
Sbjct: 188 VPKTESQGRIHTSTATVLVTPEI-EPEDFDIDMNDLEMETMRASGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+ V+CQ  RSQH+N+A A   +R+++Y  E  +R+     G   + +IG G   
Sbjct: 247 VHKPTGITVKCQDGRSQHENRATALMTIRSRVY--EEHQRKLEEEQGIERRNKIGTGDRA 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R          +++G + D + A L+  +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQ 349


>gi|317475302|ref|ZP_07934568.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
 gi|316908556|gb|EFV30244.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
          Length = 370

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/353 (30%), Positives = 177/353 (50%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  + +   + L   Q  + E+E  Q + LL  +   DS +A LE+  GAGG E+
Sbjct: 71  IANETDAEMREMAREELDACQTRQPELEE-QIKLLLVPADPQDSRNAILEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++ E + +K +    ++G   G K     + G N YG LK E GVHR+
Sbjct: 130 AIFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360


>gi|304311492|ref|YP_003811090.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
 gi|301797225|emb|CBL45445.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
          Length = 362

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 182/340 (53%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +     +  +  +  + + L +E   L+  ++   + +  L D  +  +L
Sbjct: 9   LESIAERHEEVAALLSEGSVISDQNQFRKLSQEYAELEPVVTCFADYRKVLADITLARQL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +  ++ L+  + + +  + +     L     D  + YLE+ AG GG E+ 
Sbjct: 69  M-EDSDPEMREMGAEELRTGQAQRDQFELDLQKLMLPKDPNDGRNVYLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE   ++ E +  H+GE  G K     + G + Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRYAESCGWRVEVISEHEGEHGGYKEIISRVSGDSVYSKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  D+  +I+I   D ++DTYR++GAGGQHVNTTDSAVR
Sbjct: 188 RVPVTEAQGRIHTSACTVAVLPEADEIGDIDIRPEDLKMDTYRSTGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGR 310
           +TH+PTG VV+CQ+ERSQHKN+A+A  +LRA+L    +  +  + +              
Sbjct: 248 LTHLPTGTVVECQEERSQHKNRAKALALLRARLLSNAQDAQTRQTSEARRQLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+     +++++GDL + +++ 
Sbjct: 308 RIRTYNF-PQGRLTDHRINLTLYRLNEIVEGDLSEVVQSL 346


>gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
 gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
          Length = 362

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 182/352 (51%), Gaps = 17/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   S L  +  DP L  +   A+ + +    L   ++  ++++    D     EL
Sbjct: 9   IDDILAEYSGLEQQMSDPALHNDASAARKVGKRFAELAPIMATHRKLEAAREDRAAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           A   DD S   E    +   +++   +Q   LL      DS+D  LEV +G GG ES  +
Sbjct: 69  AA--DDSSFADEV--TVLTEQIDALEQQLTDLLAPRDPHDSDDVVLEVKSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLKGE 184
           A  L RMY R+AE+R +K E L     +  G K AT  IK             +  +K E
Sbjct: 125 AGDLARMYLRYAEQRGWKVETLGATYSDLGGYKDATFAIKSRGPGADGAIDGVWARMKFE 184

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + VYP  D+  E++I ESD RID YR+SG GGQ VN
Sbjct: 185 GGVHRVQRVPATESQGRIHTSAAGVLVYPEPDEVEEVQIDESDLRIDVYRSSGKGGQGVN 244

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PT +VV CQ ERSQ +NKA+A  +L A+L  L  ++ E  A+   +++ 
Sbjct: 245 TTDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLQALREEEAEAAASDSRAAQI 304

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +    +IR+Y   P   + D R   +  +   VLDG+LD  + A  A  +
Sbjct: 305 RTVDRSERIRTYNF-PENRIADHRIGFKAHNLDQVLDGELDPLLDALQAADR 355


>gi|329965246|ref|ZP_08302176.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
 gi|328523266|gb|EGF50366.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
          Length = 370

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 99/352 (28%), Positives = 170/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQILSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +       E  +   + +   DS +A LE+  G GG E+ 
Sbjct: 71  MANETDPEMREMAREELDTCQSRQPELEEQIKLLLVPADPQDSRNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ E    ++G   G K     I G   YG +K E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWRMEISSANEGSAGGFKEIVCSITGDGVYGTMKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|47558934|gb|AAT35567.1| protein release factor 1 [Chlamydia trachomatis]
          Length = 359

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 182/342 (53%), Gaps = 13/342 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
           ++RL  +  +  DP+++ N  E   L +E   L    +  + +   +  L D+ + L   
Sbjct: 9   LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLAL--- 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
             E D  I+    + +   +  VE   KQ E+LL      D     +E+ AG GG E+  
Sbjct: 66  STEKDPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +    +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R
Sbjct: 126 FVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVR
Sbjct: 186 VPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S++   G    
Sbjct: 246 ITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSAQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R  +   +   V++G+LD    A + 
Sbjct: 306 RIRTYNF-PQNRVTDHRIALTLYNLDRVMEGELDMITTALVT 346


>gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
 gi|166223612|sp|A6Q6B4|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
          Length = 355

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/337 (31%), Positives = 179/337 (53%), Gaps = 9/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R + ++     P +  ++     L +E+  L   +       +         EL  +E+
Sbjct: 11  DRYNEISELLSSPDIASDINRMTELSKEQSGLAPLVEKANLYIETADAIAENKELLSDEE 70

Query: 81  DCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E    L+ +  ++E + +   +   + D  + +LE+ AGAGG ES  +   + R
Sbjct: 71  LGDLAKEELSELEPMLPKLEEEIKILMIPKDKNDDKNIFLELRAGAGGDESALFVADVFR 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE+  +K E +  +DG   G K     IKG   Y  LK E G HR+ R+   ++ 
Sbjct: 131 MYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEIKGQGVYSQLKYEAGTHRVQRVPDTETQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P V D +E++I  ++ ++D YR+SG GGQ VNTTDSAVR+THIPTG+
Sbjct: 191 GRVHTSAITVAVIPEV-DDVEVDIKPNEVKMDVYRSSGCGGQSVNTTDSAVRLTHIPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV  Q E+SQHKN+ +A  +L+A++YE EL  ++++       K ++G G    +IR+Y 
Sbjct: 250 VVAIQDEKSQHKNRDKAMKVLKARVYESEL--QKQLDETAGQRKLQVGSGDRSEKIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             P   + D R  +   +  DV+ +G+L   +   +A
Sbjct: 308 Y-PQNRLTDHRIGLTLYALDDVMNNGNLKLVIDPLIA 343


>gi|221195206|ref|ZP_03568262.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
 gi|221185109|gb|EEE17500.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
          Length = 355

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 171/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +  E   + +E       +   +   D L D     EL
Sbjct: 5   LEKILSAYADLEKKLADPAVVSDPKEYARIAKEHADQAELVELSRSYIDALDDIEAAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D    +    ++   + ++   +     + +     D  D  +E+ AG GG E+ 
Sbjct: 65  LSGSSDAEEKEMLQADISENEAKLPELEDEIKIKLIPGDPNDEKDTIVEIRAGVGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE R +K + L     E  G K+    + G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYERFAESRGWKVQVLSSSPSEAGGFKTIEFKVTGEKVYSVMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+I+I++ D RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLPEA-DDIDIQINQEDLRIDTYCASGPGGQGVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q +RSQ +N+     MLRA+LYE EL++++  A  G    ++IG    
Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEQELERQQ--AEQGADRLSQIGHGAR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y  QP   V D R      + + VL GD L   +++  A ++
Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGF-NGTYNGVLLGDTLPSVIESLAAAER 347


>gi|16332286|ref|NP_443014.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803]
 gi|2500139|sp|P74707|RF1_SYNY3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1653916|dbj|BAA18826.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 175/352 (49%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q    L     DP +  N  E + + + R  L+  +   +  +    D   
Sbjct: 6   LLDKLASVEQTYQELTRMLADPDIATNPDELQRVAKARSSLEETVDTYETWKRSQEDLKG 65

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
             ++  E  +D  + +     ++ ++  +   +       L     D  +  LE+ AG G
Sbjct: 66  ARQIVKESGNDPEMREMAQLEVEELENAIGELEKRLTILLLPKDPNDEKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  L+RMYTR+AE + +K   L     +  G K A L +KG   Y  LK E G
Sbjct: 126 GDEASIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEVKGDRVYSQLKFEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ + P V D +E++I   D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPVTEAGGRVHTSTATVAIMPEV-DDVEVKIDPKDIEMSTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLY++ L  +E+   I  + ++++
Sbjct: 245 ETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMML--QEQNDAISSNRRSQV 302

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y  +    V D R        +  L+G++   +++ ++  +
Sbjct: 303 GTGSRSEKIRTYNYKD-NRVTDHRLG-RNFDLNTALEGEIHTIIESCISQDQ 352


>gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
 gi|119361507|sp|Q2GKS8|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
          Length = 359

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           ++   ++   L  +   P          +  RE   L   +S I++ +    +   L EL
Sbjct: 7   FEGLCEKFRILKQQLSAPETLGTQA-FVVASREYSDLLPIMSLIEKYKSTQKEIAELEEL 65

Query: 76  A-LEEDDCSILQETSDNL---QRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTES 130
                 D  +     D     Q++  ++ +  Q   L     DS +A LE+ AG GG E+
Sbjct: 66  VNSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKDRDDSRNAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+  I G + +  LK E GVHR+
Sbjct: 126 ALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P V + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLPEV-EEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QKREE   I +  K++IG G 
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKREE--EISKMRKSQIGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              +IR+Y       + D R N+       V+ +GDLD+F+ A +A  +
Sbjct: 303 RSERIRTYNFL-QSRITDHRINLTSYRLDYVMKEGDLDEFIDALVADDQ 350


>gi|319408172|emb|CBI81825.1| peptide chain release factor 1 [Bartonella schoenbuchensis R1]
          Length = 359

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                +R   + ++    P    N      L  E   L   ++ I+ +     +   L  
Sbjct: 9   IKQIEKRFEIIESQMAGSP----NAETYIKLASEYAELQLIVTPIRTLNALYKEIEELKN 64

Query: 75  LALEED-DCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  ++  D  +     + L    Q+I+      Q   L    AD   A +E+ AG GG+E
Sbjct: 65  IISDKQTDVEMRNLAQEELSLLCQKIEQLERELQILLLPKDIADEKSAIIEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A    +K E + + DG+  G K     + G   +  LK E GVHR
Sbjct: 125 AALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVATVSGKGVFSKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   ++  R HTS +++ V P   + I+I I   D RIDT RASGAGGQHVNTTDSA
Sbjct: 185 VQRIPETEAGGRIHTSAATVAVLPEA-EEIDIAIHPEDIRIDTMRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           VRITHIPTG++V  Q E+SQH+N+ +A  +LRA+L+++E QK E E +   ++       
Sbjct: 244 VRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQKAENERSESRKTQIGSGDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       V++GDLD+ + A ++
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELIHALIS 345


>gi|17231677|ref|NP_488225.1| peptide chain release factor 1 [Nostoc sp. PCC 7120]
 gi|20139331|sp|Q8YPK9|RF1_ANASP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17133320|dbj|BAB75884.1| translation releasing factor RF-1 [Nostoc sp. PCC 7120]
          Length = 366

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 183/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP   +N  E + + + R  L+  +      +    + +   ++
Sbjct: 10  LKSVEQTFNELTRRLGDPDTAKNPDEYQKIAKSRSSLEEVVETYDNWKIAQEELIGARQV 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
             E + D  + +  +  ++ ++ +++Y +       L     D  +  LE+ AG GG E+
Sbjct: 70  LKEANSDPDMHEMAALEVKELEEKIDYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + ++ + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGESVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +EI I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMPEV-DEVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L  RE+   +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKL--REQQEEVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  S + VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKDS-RATDHRLG-QNFSLNPVLEGDLETVIQSCISQDQ 352


>gi|86606113|ref|YP_474876.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
 gi|119361625|sp|Q2JUK1|RF1_SYNJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86554655|gb|ABC99613.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
          Length = 361

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 177/349 (50%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N       L  +  DP +  +  E + + + R  L+  +    E Q    +     EL
Sbjct: 10  LKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQTFHEWQKLTRELKQTEEL 69

Query: 76  ALE--EDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             E   DD  +       L++++       E      L     D  +  LE+ AG GG E
Sbjct: 70  LREVASDDPELEAMARAELEQLRVRQEQLEEKLTLLLLPRDPNDEKNIMLEIRAGTGGEE 129

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  WA  L RMYTR+AEK  +      + +GE  G K A L I+G   Y  LK E GVHR
Sbjct: 130 AALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEIRGDQVYSKLKFEAGVHR 189

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P V D +E+ I   D  I T R+ GAGGQ+VN  ++A
Sbjct: 190 VQRVPVTEAQGRVHTSTATVAVMPEV-DEVEVVIDPKDIEIKTARSGGAGGQNVNKVETA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++L  +E+ A+I  + + ++G G
Sbjct: 249 VDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKL--QEQQASISSARRMQVGTG 306

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y  +    V D R N +      +L+G+LD+ ++A + + +
Sbjct: 307 SRSEKIRTYNYKD-NRVTDHRLN-QNFLLEPILEGELDELIQACIGLYQ 353


>gi|221134749|ref|ZP_03561052.1| Protein chain release factor B, RF-2 [Glaciecola sp. HTCC2999]
          Length = 248

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +   D ND YL++ +G+GGTE+QDWANMLLRMY RW E+  FKTE +E+ DG+ AGIK
Sbjct: 1   MFAKPNDGNDCYLDIQSGSGGTEAQDWANMLLRMYLRWGEENGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S ++YP ++D I+I+I+ S
Sbjct: 61  SATIRFGGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASAFIYPEINDDIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH+PT +VVQCQ +RSQHKNK QA+  L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+ E     E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG+L+ F
Sbjct: 181 YELQKQNEEKQAMEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGNLNKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|325679581|ref|ZP_08159156.1| peptide chain release factor 1 [Ruminococcus albus 8]
 gi|324108611|gb|EGC02852.1| peptide chain release factor 1 [Ruminococcus albus 8]
          Length = 359

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       + + +N +   P +  +      LM E + L   +  +KE      +   
Sbjct: 1   MFDKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYRDLQPIVEKLKEYDKAKAEFDE 60

Query: 72  LLELA----LEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAG 126
            +E+     L++D   ++QE  D  +    ++E   +   L     D  +  +E+  GAG
Sbjct: 61  AVEMMNDGGLDKDMKEMVQEQYDESKTAMAQLEDDLKILLLPKDPNDDRNVIIEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN L RMYT +A ++ ++ + +  ++ E  G K  T  + G  AY  LK E G
Sbjct: 121 GEEAALFANSLYRMYTMYAAQKGWQIDVMSANETELGGYKEITFTVSGQGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P  ++       E D +++ +R+SGAGGQH+N T
Sbjct: 181 VHRVQRVPETESQGRVHTSTVTVAVLPEAEEVELDLNEERDIKMEVFRSSGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+ HIPTG VV+CQ ERSQ +N+ +A  MLRAKL  L+ + R +   I  + ++++
Sbjct: 241 SSAVRLIHIPTGTVVECQNERSQFQNRDKALKMLRAKL--LDEKVRAQENEIASNRRSQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +       +L+G+LD+ + A     +
Sbjct: 299 GTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQ 349


>gi|50365449|ref|YP_053874.1| peptide chain release factor 1 [Mesoplasma florum L1]
 gi|61214613|sp|Q6F0I3|RF1_MESFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50364005|gb|AAT75990.1| peptide chain release factor 1 [Mesoplasma florum L1]
          Length = 363

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 177/345 (51%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R+  ++   +   +  +V +   L +ER +L   +    E +  +       E+
Sbjct: 9   LETMQKRVDQIDKDLQSEEIVSDVKKMLELNKERANLIEVVEKFIEYKTIIQSIADAKEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L   +  VE      +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LGNEKDAEMIELAKMELSENEDAVEPIVAIIEELLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   L+ +  E  G    + ++KG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKITMLDANSSEAGGFSQVSFMVKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P + D +EIEI  SD RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLPEMSD-VEIEIKNSDLRIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVV   Q  RSQH NK  A  MLRA++YE EL+K++  A+    +    G    
Sbjct: 248 ITHIPTGVVAASQDGRSQHDNKDIAMTMLRARIYEAELEKQQAEADATRKNAVGTGARSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G +DDF+ A +  ++
Sbjct: 308 KIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGKIDDFIIALVNDEQ 351


>gi|326692970|ref|ZP_08229975.1| peptide chain release factor 1 [Leuconostoc argentinum KCTC 3773]
          Length = 357

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 168/342 (49%), Gaps = 4/342 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L +E   +   +      Q  + +     EL
Sbjct: 8   LQTVVDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQEIQEAEEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E   +L+  K ++E   +   L     D  +  +E+    GG ES  +A
Sbjct: 68  LDDAEMAPLAKEDLADLKPEKAQLEDQLKILMLPKDPNDDKNIIMEIRGAVGGDESSLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ R+ 
Sbjct: 128 ADLLDMYRRYAEKQRWTLSIIDESMTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H
Sbjct: 188 STETQGRVHTSTATVGVMPEF-EDIDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIR 313
            PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E   A   +S+        +IR
Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAAYAEQRKSAVGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R  +       V++G+L + + A +   +
Sbjct: 307 TYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALIIADQ 347


>gi|57505831|ref|ZP_00371756.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
 gi|57015861|gb|EAL52650.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
          Length = 355

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 188/344 (54%), Gaps = 21/344 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELA 76
           ++R   LNT   D  +  ++ +   L +E+++L+  +   K+  +   ++ DN  LL   
Sbjct: 10  LKRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALL--- 66

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              +D    +   + L+ ++ E        +   L     D  + +LE+ AG GG E+  
Sbjct: 67  ---NDPEFSELAKEELKNLEEEKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L++ Y ++A+ R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R
Sbjct: 124 FVGDLVKAYAKYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ + P V D IEI+I+ +D +ID  R+SG GGQ VNTTDSAVRI
Sbjct: 184 IPQTESQGRIHTSAITVAIMPEV-DDIEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G   
Sbjct: 243 THIPSGLVVVNQDGKSQHKNKESAMKILKARLYEMQESER--LAKESEARKSQVGSGDRS 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
            +IR+Y   P   + D R N+       +++G L D+ ++  +A
Sbjct: 301 ERIRTYNF-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIA 343


>gi|254472406|ref|ZP_05085806.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
 gi|211958689|gb|EEA93889.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
          Length = 357

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 175/347 (50%), Gaps = 22/347 (6%)

Query: 16  WDNAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            D  + R   +  +      P +         L R+   L+  +  I+E++    D    
Sbjct: 7   LDTLLARFEGIEAEMASGPAPDV------YIKLSRDYAELEPIVMSIRELRKAEGDLEGA 60

Query: 73  LELALEED-DCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGG 127
             L  + D D  + +        +   VE      +   L   +ADS+D  LEV AG GG
Sbjct: 61  EALLSDPDSDAEMKELAQLERDELTGVVEELTQKVRIGLLPKDKADSHDVILEVRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+A+   +K E +   +G+  G K     + G   +G LK E GV
Sbjct: 121 DEAALFAGDLFRMYQRFADNNGWKVEVMSSSEGDMGGFKEIVAAVTGQEVFGKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I+ +D RIDTYRASGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLPQA-EEVDVDINPADLRIDTYRASGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTG+VV  Q ERSQHKNK +A  +LRAK+Y++E           E+ + ++G
Sbjct: 240 SAVRITHNPTGIVVAVQDERSQHKNKDRAMKLLRAKIYDVER--ERAANERTEARRVQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKAT 350
            G    +IR+Y   P   V D R  +       ++ G+   + + A 
Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQMMTGEATGEVIDAL 343


>gi|268678716|ref|YP_003303147.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616747|gb|ACZ11112.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 355

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/338 (34%), Positives = 179/338 (52%), Gaps = 9/338 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + L     DP++  ++ +   L +E+ +L+       E    L        L  +E
Sbjct: 10  LDRYNELTMLLSDPNVSNDIKKMTALSKEQSNLEPIKEKTLEYFSTLEQIEENRFLLEDE 69

Query: 80  DDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+  K  +E + +   L     D  + +LE+ AG GG E+  +A  L 
Sbjct: 70  ELGELAKEELKLLEPHKEILEDEIKLLLLPKDPNDERNIFLEIRAGTGGDEAAIFAADLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+AE R +K E + + +G   G K    LIKG  A+  LK E GVHR+ R+   +S
Sbjct: 130 KSYLRYAENRGWKVEVVSLSEGVLNGYKEVIALIKGQGAFSRLKYEGGVHRVQRVPLTES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P V D +E++I E D +ID  R+SG GGQ VNTTDSAVRITH+PTG
Sbjct: 190 QGRVHTSAVTVAVMPEV-DDVEVDIQEKDLKIDVMRSSGNGGQSVNTTDSAVRITHLPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q  +SQHKNK  A  +L+AKLY++++  +E  A   E+ K ++G G    +IR+Y
Sbjct: 249 IVVVNQDGKSQHKNKDAAMKILKAKLYDMQM--QERNAKESEARKQQVGSGDRSARIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
              P   + D R  +       +++G L D+ +   + 
Sbjct: 307 NY-PQNRITDHRVGLTLYRLDAIMEGGLYDELIDPIIT 343


>gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|61214644|sp|Q73X48|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 357

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 118/333 (35%), Positives = 172/333 (51%), Gaps = 11/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   +   +++     D     EL
Sbjct: 8   IDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E +D L+    +++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  AA--DDDSFTAEVAD-LESRVAQLDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR
Sbjct: 125 ADLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  E++I ESD RID +R+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTGVVV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +  
Sbjct: 245 VRITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             +IR+Y   P   + D R   +  +   VLDG
Sbjct: 305 SERIRTYNF-PENRITDHRIGFKAHNLDQVLDG 336


>gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654]
          Length = 351

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 173/345 (50%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR  FL  K     L  +  E   + RE   L   +  I   +  L D      +
Sbjct: 7   LDAITQRFQFLEAKMSQ-GLSGD--EIAEVGREYAELKPVVEEIAAFRQLLSDIEDAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D L  ++  +   +       L    AD+  A +E+  G GG E+ 
Sbjct: 64  LS---DPEMRELAEDELPGLRERLPVMEQAMRVALLPRDAADARPAMVEIRPGTGGDEAS 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE R +K + LE    E  G+K     + G   +  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEVVARVSGDGVFARLKFESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I I  +D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 181 RVPETESGGRIHTSAATVAVLPEA-EDVDIHIDPADIRIDTMRASGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIPTG+VV    E+SQH+N+  A  +L+ +L++ E Q+  +E A+  ++         
Sbjct: 240 ITHIPTGIVVTSS-EKSQHRNREIAMQVLKTRLFDAERQRAHDERASARKAQVGSGDRSE 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+      DV+ GDLD+ + A +   +
Sbjct: 299 RIRTYNF-PQGRMTDHRINLTLYKLGDVMQGDLDEVIDALIEADQ 342


>gi|290580477|ref|YP_003484869.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
 gi|254997376|dbj|BAH87977.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
          Length = 359

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDIVSDTKCFMKLSREEANSRETVAVYREYKQVVQNIADAQEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +  DD  + +   + L+  K+  E  +    F  L     D  +  LE+   AGG E+
Sbjct: 67  IKDASDDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G+K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 350


>gi|167629003|ref|YP_001679502.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
 gi|238687991|sp|B0TI71|RF1_HELMI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167591743|gb|ABZ83491.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
          Length = 354

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 18/333 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   Q+   L     DP + Q+    +   +++  +   +   +  +     + D   +
Sbjct: 5   LEIIEQKYDELTQLLSDPEIIQDQTRWQRHAKQQAGMTEIVDTFRAYKGVLQGIDDARAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGT 128
           L     E D  + +  S  L  +    E  +       L     D  +  +E+ AG GG 
Sbjct: 65  L----AESDPELQEMASLELDELLARKEELEQRLKVLLLPKDPNDDKNVIIEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+A+++ ++TE L  +  +  G K   +LI+G  A+  LK E GVH
Sbjct: 121 EAALFAGDLYRMYSRFADRQGWRTELLSANYTDIGGFKEVIVLIEGQGAFSKLKFESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P   + +EIE++ ++ RID + +SGAGGQHVN T+S
Sbjct: 181 RVQRVPATESSGRIHTSAATVAVLPEA-EEVEIEVNPNELRIDVFCSSGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQ KN+ +A  +LRA+L  LE  + E+   +  + K+ +G 
Sbjct: 240 AVRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARL--LEKAREEQHGEMASARKSMVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           G    +IR+Y   P   V D R  +       +
Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRIGLTLHRLETI 329


>gi|189467991|ref|ZP_03016776.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
 gi|189436255|gb|EDV05240.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
          Length = 370

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + +   KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +  + E ++   LL   +   DS +A LE+  G GG E+ 
Sbjct: 71  ITNEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +K E   +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKFCETKGWKMEISSVNEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGV     ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYVWKNPNTGVSEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|297626232|ref|YP_003687995.1| peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921997|emb|CBL56559.1| Peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 359

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 172/343 (50%), Gaps = 10/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              Q  + L  +  DP +  +   ++ + R    L   +  + E Q    D     ELA 
Sbjct: 7   GLRQEFADLEKQLADPAVVSDQARSRKVGRRYSELTGVVHALDEHQQLTEDLSAARELA- 65

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            +DD +   E      R+    +            DSNDA +E+ +G GG ES  +A  L
Sbjct: 66  -DDDPAFAAEADQISARLDEVTDKLTALLAPRDPLDSNDAIMEIKSGEGGEESALFAGDL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT--LLIKGPNA---YGWLKGEQGVHRLVR 192
           L MY  +AE+  + TE ++    +  G KS T      G +A   YG LK E GVHR+ R
Sbjct: 125 LNMYQHFAEREGWSTEIIDAEPTDLGGFKSVTLAFRATGHDAQAPYGALKFEGGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + V P V++S EIEI+  D RID YR++G GGQ VNTTDSAVRI
Sbjct: 185 VPVTESQGRIHTSAAGVLVMPDVEES-EIEINPDDLRIDVYRSTGKGGQGVNTTDSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311
           TH+PTGVVV  Q +RSQ +NK QA  +LRA+L     ++  + A     S+   +    +
Sbjct: 244 THLPTGVVVTSQDQRSQLQNKEQALRVLRARLVAAAEEQAAQQAEQARKSQVRTVDRSER 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R   +  +   VL G+L+  ++A  A  
Sbjct: 304 IRTYNF-PENRITDHRIGFKAHNLDAVLGGELEPLIEALQAAD 345


>gi|257785108|ref|YP_003180325.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
 gi|257473615|gb|ACV51734.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
          Length = 355

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/334 (33%), Positives = 169/334 (50%), Gaps = 12/334 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +  E   + +E  +  + ++   +    L D     EL
Sbjct: 5   LEKIVDAYAELEQKLADPAVVSDPKEYARVAKEHSNQADLVAHANKYITALDDIEAAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D    +   +++   +  +   +   + +L      D  D  +E+ AG GG E+ 
Sbjct: 65  LNATSDPEEKEMLQEDIAANEEMLPQLEDEIKVMLIPGDPNDEKDTIVEIRAGVGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE R +KTE L     E  G K+    + G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYERFAEARGWKTEILSSSPSEAGGFKTIEFKVTGDKVYSVMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+I+I++ D RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLPEA-DEIDIQINQEDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL++++  A  G    ++IG    
Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELERQQ--AEQGAERLSQIGHGAR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             +IR+Y  QP   V D R      + + VL GD
Sbjct: 302 SEKIRTYN-QPQDRVTDHRVGF-NGTYNGVLLGD 333


>gi|218129333|ref|ZP_03458137.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
 gi|217988510|gb|EEC54831.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
          Length = 370

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + +   KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMKARKEYMQVLSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  + +   + L   Q  + E+E  Q + LL  +   DS +A LE+  GAGG E+
Sbjct: 71  IANETDAEMREMAREELDACQTRQPELEE-QIKLLLVPADPQDSRNAILEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++ E + +K +    ++G   G K     + G N YG LK E GVHR+
Sbjct: 130 AIFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360


>gi|219685818|ref|ZP_03540627.1| peptide chain release factor 1 [Borrelia garinii Far04]
 gi|219672651|gb|EED29681.1| peptide chain release factor 1 [Borrelia garinii Far04]
          Length = 357

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 130/345 (37%), Positives = 199/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  L  K +D +L +N  +   +++E  HL+   +     ++I  ++ DN  +
Sbjct: 6   LNSATTKIKSLEEKLQDVNLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|149174661|ref|ZP_01853286.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
 gi|148846355|gb|EDL60693.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
          Length = 360

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 178/345 (51%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            + R   L  + +DP +  N  +   + RE   L      ++E   R  D  +  E+  E
Sbjct: 9   KLDRYEELEKELQDPEVLANTSKLVEIQREYGGLAKVALAVREFNTRAEDIEVAREMLEE 68

Query: 79  EDDCSILQETSDNLQRI--KLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWA 134
           E D +  +     L  +  + E   K+ E L+            +E+ AGAGG E+  +A
Sbjct: 69  ETDPAAREYAQKELDELCEEHEKHIKELEDLVVAGDSITRGGLIMEIRAGAGGDEAALFA 128

Query: 135 NMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             L  MY  + E ++ +KTE L +   E  G+K  T  I G  AY  L+ E G HR+ R+
Sbjct: 129 RELFDMYMHFVEAQKGWKTEVLNMSATELGGLKEVTFSIAGEGAYHRLQFESGGHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   + +E++I   D R+DT+ ASG GGQ VN T+SAVRIT
Sbjct: 189 PETETQGRVHTSAATVAVLPEASE-VEVDIKPDDIRLDTFHASGPGGQKVNKTESAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+PTG VVQCQ E+SQHKNKA+A  +LR+++  LE  +++      +  +T IG G    
Sbjct: 248 HLPTGTVVQCQDEKSQHKNKAKAMRVLRSRV--LEQMQQKAADERADQRRTLIGSGDRSQ 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       ++ GDL+D + A L   +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLSLYKIDQIMQGDLNDLISALLQFDR 349


>gi|169351467|ref|ZP_02868405.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
 gi|169291689|gb|EDS73822.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
          Length = 358

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 175/341 (51%), Gaps = 8/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  ++ +   + +E+  L  A    +E ++         EL
Sbjct: 9   LKTMENRYEELGHMLMDPDIGSDIKKMTDVTKEQASLQAAYDLYQEYKEIENGIEEAKEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E  D  I +     L  ++ ++    +  + E +     D+ D  +E+   AGG E  
Sbjct: 69  AKE-HDPEIKEMAKMELAELEEKLPDVIKKLEIELIPKDPNDNKDVIMEIRGAAGGDEGN 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++AE + +K E +E  D E  G    + ++KG   YG LK E G HR+ 
Sbjct: 128 IFAGDLYRMYVKYAESQGWKVEVMEAIDAEAGGYSLISFMVKGEGVYGKLKFESGSHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P V + +++EI+++D RIDTYRASGAGGQH+N TDSAVR
Sbjct: 188 RVPKTETQGRVHTSTATVLVMPEV-EEVDVEINKNDLRIDTYRASGAGGQHINKTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+V   Q  RSQH NK +A   L A++Y+   Q++++       SK   G    
Sbjct: 247 ITHIPTGIVAASQDGRSQHDNKDKAMKALIARIYDYYQQQQDQQVESERKSKVGTGDRAE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G LDD + A +
Sbjct: 307 KIRTYNY-PQNRVTDHRIGLTIQQLDRIIEGKLDDIITALI 346


>gi|224538310|ref|ZP_03678849.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520095|gb|EEF89200.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + +   KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +  + E ++   LL   +   DS +A LE+  G GG E+ 
Sbjct: 71  ISNEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ E   +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWRMEISSVNEGAAGGFKEVICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG    ++++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYVWRNPNTGASEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360


>gi|224131216|ref|XP_002321029.1| predicted protein [Populus trichocarpa]
 gi|222861802|gb|EEE99344.1| predicted protein [Populus trichocarpa]
          Length = 416

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 182/343 (53%), Gaps = 13/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A +    L+ K  DP +  N  E + L +    LD  +S  K  +D          L
Sbjct: 58  LESAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRAL 117

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
           A E+ +D  + +  +  ++ +  E++  +       L S   D+ +  LEV AG GG E+
Sbjct: 118 AKEDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEA 177

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY R++E+  +K   +   + E+ G K+  + +KG + Y  LK E GVHR+
Sbjct: 178 GLWAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRV 237

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E+ I   +  + T R+ GAGGQ+VN  ++AV
Sbjct: 238 QRVPQTEAQGRVHTSTATVAIMPEV-DEVEVVIDPKEYELTTARSGGAGGQNVNKVETAV 296

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q +N+ +A  +LRAKLYE+++  RE+  +I    K ++G G 
Sbjct: 297 DLIHKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKV--REQQESIRNQRKMQVGTGA 354

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y  +    V D R  +     +  L GD+++ ++A 
Sbjct: 355 RAEKIRTYNYKD-NRVTDHRLKV-NFELTSFLAGDIENAVQAC 395


>gi|228470795|ref|ZP_04055643.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
 gi|228307468|gb|EEK16473.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
          Length = 368

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 168/355 (47%), Gaps = 20/355 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            +  V R   L T   DP +  +      L +E  HL   +      K++  +  +    
Sbjct: 8   IEALVARHEELETLITDPSVIADGRRFATLSKEYTHLGEILKAGAQYKQLLTQQEEAEST 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L+ +  + D  +     + L   K E     E  +   L +   D  +A LE+ AG GG 
Sbjct: 68  LQDS--DSDEELKAMARELLAEAKEESPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+ E + +        +G   G K   L + G   YG LK E GVH
Sbjct: 126 EAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   D  E+ I+E + + DT+R+SGAGGQ+VN  +S
Sbjct: 186 RVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDTFRSSGAGGQNVNKVES 244

Query: 249 AVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIG 299
            VR+ +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  +EIA+  
Sbjct: 245 GVRLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDEIASRR 304

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++  +      +IR+Y   P   V D R  +   +   VL GDL   + A +  +
Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358


>gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|81749553|sp|Q8FQ31|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens
           YS-314]
 gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
          Length = 358

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 178/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I+  +++     D     E+
Sbjct: 8   VDDILAEYHGLEEQMADPALHNDPAAARRVGKRYSELQPIINVHRQLVQVRDDLEAAREM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E       +    E          E D +D  +E+ AGAGG E+  +A 
Sbjct: 68  AHE--DHEFAAEAERLEVELVELEEKLADLLAPRDEHDGDDIVMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            LLRMY ++A+K  F  E L+  + +  G+K  TL I+        A+   K E GVHR+
Sbjct: 126 DLLRMYQKYADKHGFIIEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  ++EI E + R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKEIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +N+A+A  +L A+L  L+ ++ +  A  G +S+   +   
Sbjct: 246 RITHLPTGIVVTCQKERSQIQNRARAMQVLAARLQALQKEEADAEAAEGRASQIRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL+G+LDD   A  A ++
Sbjct: 306 ERIRTYNW-PENRISDHRIGFKANNLDAVLNGELDDLFTALRAAER 350


>gi|313206514|ref|YP_004045691.1| bacterial peptide chain release factor 1 (brf-1) [Riemerella
           anatipestifer DSM 15868]
 gi|312445830|gb|ADQ82185.1| bacterial peptide chain release factor 1 (bRF-1) [Riemerella
           anatipestifer DSM 15868]
 gi|325336038|gb|ADZ12312.1| Protein chain release factor A [Riemerella anatipestifer RA-GD]
          Length = 362

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 97/344 (28%), Positives = 166/344 (48%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +      L +E   L   +    E    L       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVKVFDEYSTALNAIKEADEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  ++       Q     +    E  ++  +    AD  +  +E+ AG GG ES 
Sbjct: 69  IADGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTGGDESA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + + + +K E  + ++    G K   + ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDVYRMYTMYFKSKGWKHEVTDSNEAS-KGYKELIMRVEGDGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLPEA-EEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH PTG+VV CQQ RSQ  N+  A  MLR KLY++ELQK + +IA   ++  +      
Sbjct: 247 LTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQGDIAAQRKTMVSTGDRSA 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N    +  + ++GD+ + + A +  +
Sbjct: 307 KIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAE 349


>gi|117927849|ref|YP_872400.1| peptide chain release factor 1 [Acidothermus cellulolyticus 11B]
 gi|166223522|sp|A0LSK4|RF1_ACIC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117648312|gb|ABK52414.1| bacterial peptide chain release factor 1 (bRF-1) [Acidothermus
           cellulolyticus 11B]
          Length = 364

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 172/340 (50%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++  + L  +  DP +  +   A+ L R    L   +   +  +    D  +    
Sbjct: 5   VEEVLREYADLERRLADPAVHADPRTARTLGRRYAQLGPIVEAYRRWKAL--DADVAAAH 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            L   D +   E        +   E  +     +   D  D  +++ AG GG ES  +A 
Sbjct: 63  ELAAADPAFRAEIPALEAEREAVAERLRSLLAPADPNDGKDVIMQIKAGEGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+R +KTE L+  + +  G K  T+ I+      A+  LK E GVHR+ R
Sbjct: 123 DLLRMYLRYAERRGWKTEILDATESDLGGYKDVTVAIRADGSEGAWSRLKFEGGVHRVQR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS   + V P   + ++++I  +D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 183 VPVTESQGRIHTSAVGVLVMPEA-EEVDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311
           TH+PTG+VV CQ E+SQ +NK  A  +LR++L  L  ++ E  A     S+   +    +
Sbjct: 242 THLPTGIVVSCQNEKSQLQNKETALRILRSRLLALAQEEAEAQAAAQRRSQVRTVDRSER 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   + D R N +  +   VLDGDLD  ++A +
Sbjct: 302 IRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVIQALV 340


>gi|103488191|ref|YP_617752.1| peptide chain release factor 1 [Sphingopyxis alaskensis RB2256]
 gi|119361612|sp|Q1GPK3|RF1_SPHAL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|98978268|gb|ABF54419.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingopyxis
           alaskensis RB2256]
          Length = 355

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 185/342 (54%), Gaps = 6/342 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R + L  +     +     +     +E   L+   +  +E+     + + L E+
Sbjct: 9   IDAIIERHAALQARMATGDMA--PADFVAASKEFAELEPVATAAREVVRLREELVALNEM 66

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ ++E +     +         + L    ADS  A LE+ AG GG E+  +A
Sbjct: 67  LADPEMKAMAVEEIAAVEAALPAAEHDLALQLLPKDVADSRAAMLEIRAGTGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+A+ + +K E +  ++ E  G K     + G   +  LK E GVHR+ R+ 
Sbjct: 127 GDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVASVSGQGVFAKLKFESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I++SD +ID YRASGAGGQHVNTTDSA+RITH
Sbjct: 187 VTESGGRIHTSAATVAVLPEA-EEVDVAINDSDLKIDIYRASGAGGQHVNTTDSAIRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           IPTG+VV  Q +RSQHKN+A+A  +LRA+LY+LE +K     A+  +S         +IR
Sbjct: 246 IPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLEREKLHSAEASARKSMVGSGDRSERIR 305

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R N+      ++L+G +D+ + A +A  +
Sbjct: 306 TYNF-PQGRVTDHRINLTLHRLPEILEGAMDELIDALIAEDQ 346


>gi|228472858|ref|ZP_04057615.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275440|gb|EEK14217.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
          Length = 357

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 98/344 (28%), Positives = 171/344 (49%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR   ++     P++  +      L +E + L   +   +E      +     E+
Sbjct: 5   LDIVKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKRQEYITVTRNITEAEEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +     L+  K  +    E  +F  +     DS +A +E+ AG GG E+ 
Sbjct: 65  IKENIDPEMTEMARLQLEEAKERLPQLEEEIKFLLIPKDPEDSKNAVMEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ + + +    +++++G   G K   L + G + YG LK E GVHR+ 
Sbjct: 125 IFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEVNGEDVYGTLKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   +  ++E++  D +I    ++G GGQ VNTT SA++
Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEA-EEFDVELNMEDVKIIRTTSTGPGGQSVNTTYSAIQ 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           + HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E  +    S    G    
Sbjct: 244 LQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRSA 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R  +      ++++GD+   +      +
Sbjct: 304 KIRTYNY-PQGRVTDHRIGLTLYDLGNIMNGDIQRLIDELQLAE 346


>gi|328542097|ref|YP_004302206.1| peptide chain release factor 1 [polymorphum gilvum SL003B-26A1]
 gi|326411847|gb|ADZ68910.1| Peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1]
          Length = 357

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 183/346 (52%), Gaps = 20/346 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  + R + +  +        N   A    L RE   L+  ++ ++ ++    +     
Sbjct: 7   LDTLLARFAEIEHRMS-----SNPDAATYVRLSREYSDLEPLVARVRALRRAEAELADAE 61

Query: 74  ELALEE-DDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGT 128
            L  +   D  + +      + +   VE      +   L    AD+NDA LEV AG GG 
Sbjct: 62  ALLEDSVGDPDMAELAEAEREALAARVEALTQEVRIGLLPKDSADTNDAILEVRAGTGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+A+ + +K E L   +GE  G K     + G N +  LK E GVH
Sbjct: 122 EAALFAGDLFRMYQRYADLKGWKVEILSASEGEMGGFKEVIASVSGENVFARLKFESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++I++ +SD RIDTYRASGAGGQHVNTTDS
Sbjct: 182 RVQRVPETESGGRIHTSAATVAVLPQA-EDVDIDVHDSDLRIDTYRASGAGGQHVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV  Q ERSQHKNKA+A  +LRAK+Y+ E +K    +   E+ + ++G 
Sbjct: 241 AVRITHLPTGIVVAVQDERSQHKNKAKAMQLLRAKIYDAEREK--AASERTEARRLQVGS 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
           G    +IR+Y   P   V D R  +       V+ G+ LD+ + A 
Sbjct: 299 GDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQVISGEALDEVIDAL 343


>gi|222153023|ref|YP_002562200.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
 gi|254790901|sp|B9DS45|RF1_STRU0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222113836|emb|CAR41933.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
          Length = 359

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +    ++  ++ +D +       E+
Sbjct: 7   LQSLEDRYEELGELLSDPEVVSDTKRFMELSKEEANTRETVATYRQYKDIIQSISDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  I +   + L+  K+  E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDPEIEEMAKEELKESKVAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY R+AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLDMYQRFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EDVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|297172147|gb|ADI23128.1| protein chain release factor A [uncultured gamma proteobacterium
           HF0770_09E07]
          Length = 359

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 190/339 (56%), Gaps = 3/339 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  ++   L+T+  DP L  ++ +   L +E   + + +      Q+       L  L
Sbjct: 9   LDSIQKKADDLSTQLSDPKLTSDINQLTKLNKEYSEIKDVVENWNRYQELEASIEDLDTL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWA 134
           A +E+  S+  E  D  ++   ++E +    LL   + D  ++++E+ AGAGG E+  + 
Sbjct: 69  AKDEEMKSLALEEKDQNEKELEKIEAEIMIQLLPKDKDDERNSFVELRAGAGGDEAAIFV 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE+ K+K E ++       G K   + + G + YG LK E GVHR+ R+ 
Sbjct: 129 GDLYRMYGRFAERSKWKVEKIKEIPSGTGGFKEIVIKVIGADTYGNLKFESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P +DD  E ++  S+ R+DTYRASGAGGQHVN TDSAVR+TH
Sbjct: 189 LTESQGRIHTSTATVAVLPEIDDIEEKDLDMSEIRVDTYRASGAGGQHVNKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +P+G+VV+CQ +RSQHKNKA+A  +L +K+Y++E QK E+       S    G    +IR
Sbjct: 249 LPSGIVVECQDDRSQHKNKAKALGLLSSKIYDIEKQKIEQEKASERKSLVGTGDRSEKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R  +   +    +DGD+D+ + +  A
Sbjct: 309 TYNF-PQGRITDHRLKLTLYNIDSFIDGDIDEMLNSLKA 346


>gi|163746457|ref|ZP_02153815.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
 gi|161380342|gb|EDQ04753.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
          Length = 351

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 174/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I   Q    D     E+
Sbjct: 7   LAQISQRFQFLEASMSAGS---DGADFAALAKEYSDLKPVVDQIDLYQQLQRDLEEAQEM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    EVE   Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LKDPEMAELAREELPRLRARLPEVEGALQLALLPRDAADAKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  + +E    E  G+K     I G N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWGFDLIESQMTELGGVKEVVAHITGQNVFARLKFESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++IEI+ +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 STESGGRIHTSAATVAVLPEA-EDVDIEINANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG+VV    E+SQH+N+ +A  +L+A+LY++E  + +   +   +++   G    +IR
Sbjct: 243 IPTGIVVTSS-EKSQHRNRDKAMQVLKARLYDMERGRIDSERSADRAAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 302 TYNF-PQGRMTDHRINLTLYRLEAVMQGDLDEIIDALTA 339


>gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4]
 gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4]
          Length = 356

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 181/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ L R    L   +  ++E+     D     EL
Sbjct: 6   LKGLLDEHARLEQELADPAVHADQARARKLGRRYAELSPVVRAVRELDQARDDLSAAKEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
           + E+   +     +D L     ++E K  E LL     D +D  +E+ +G GG ES  +A
Sbjct: 66  SAED---ATFAAEADELTAKIPQLEAKLTELLLPRDPYDGSDVVMEIKSGEGGEESALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             LLRMY R+AE+  +K E L+  + +  G K  TL +K         +  LK E GVHR
Sbjct: 123 GDLLRMYLRYAERHNWKAEVLDSTESDLGGYKDVTLSLKSKTADVEGVWARLKFEGGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS S + +YP  +  +E+EI  +D RID +R+SG GGQ VNTTDSA
Sbjct: 183 VQRVPATESQGRIHTSASGVLIYPEPE-EVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ E+SQ +N+A+A  +L+A+L  +  ++    A+    S+   +  
Sbjct: 242 VRITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAIAEEEAAAKASDARRSQVRTVDR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++R+Y   P   + D R N +  +   VLDG+LD  + A  A  +
Sbjct: 302 SERVRTYNF-PENRISDHRVNYKAYNLDQVLDGELDGVLDALAAADR 347


>gi|227431146|ref|ZP_03913202.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227353098|gb|EEJ43268.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 356

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 10/338 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              LN +  DP +  N      L +E   +   +      +  + D  +  EL     D 
Sbjct: 15  YDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQVAEELL---GDA 71

Query: 83  SILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            +     ++L  +K E E  +       L     D  +  +E+   AGG ES  +A  LL
Sbjct: 72  EMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFAADLL 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY R+AE++ +    ++    E  G K   ++I G N Y  LK E G HR+ R+   ++
Sbjct: 132 DMYRRYAERQNWSMSIIDQSTTEVGGYKEVAIMITGGNVYSKLKFESGAHRVQRVPATET 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H PTG
Sbjct: 192 QGRVHTSTATVGVMPEF-EEIDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIHKPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVL 317
           ++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E E A   +S+        +IR+Y  
Sbjct: 251 IMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESEYAAQRKSAVGTGDRSERIRTYNY 310

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            P   V D R  +       +++G+L + + A +   +
Sbjct: 311 -PQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQ 347


>gi|224532320|ref|ZP_03672952.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
 gi|224511785|gb|EEF82191.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
          Length = 269

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 136/266 (51%), Positives = 184/266 (69%), Gaps = 1/266 (0%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                 ++ + +     S    E D+N A+L +H+GAGGTE+ DW  ML RMY+R+ E++
Sbjct: 2   EIEFNILEKQYKDLLTISYFKEELDANGAFLTIHSGAGGTEACDWVAMLYRMYSRYVERK 61

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+S
Sbjct: 62  KYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFAS 120

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +RS
Sbjct: 121 VFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRS 180

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD RT
Sbjct: 181 QHKNKEMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRT 240

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
             E ++ + V+DG++D+F++  L  K
Sbjct: 241 KFENSNTTSVMDGNIDNFIEEYLKWK 266


>gi|154149107|ref|YP_001407141.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
 gi|166223542|sp|A7I3Q0|RF1_CAMHC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|153805116|gb|ABS52123.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
          Length = 355

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 21/344 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLELA 76
           ++R   ++    DP +  ++     L +E++ ++   +      E+   + DN  L+   
Sbjct: 10  LKRYDEISESLSDPKILSDISLVTKLSKEQRSIEPVRNATLQYLEVLKNIEDNKSLI--- 66

Query: 77  LEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              +D  +     + L+ +++      E  +   +     D  + +LE+ AG GG E+  
Sbjct: 67  ---NDTELGDLAKEELKNLEISQNKLEEEIKILLIPKDPNDEKNIFLEIRAGTGGDEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LL  Y R+AE R +KTE +   +G   G K   LL+KG  AY  LK E G HR+ R
Sbjct: 124 FAGDLLDAYLRYAELRGYKTEIVSQSEGSAGGFKEVILLVKGDGAYSRLKFEGGTHRVQR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P ++DS EI+I+E+D RID  RASG GGQ VNTTDSAVRI
Sbjct: 184 VPETESQGRVHTSAITVAIMPEIEDS-EIQINENDLRIDVMRASGHGGQCVNTTDSAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           THIPTG+VV  Q  +SQHKNK  A  +L+A+LY+L+  ++E  A      K ++G G + 
Sbjct: 243 THIPTGLVVTNQDGKSQHKNKEAAMKVLKARLYDLQ--EKERKAKEQSERKDQVGTGDRS 300

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
             IR+Y   P   + D R N+       ++ G L D+ +   +A
Sbjct: 301 GRIRTYNY-PQNRITDHRINLTLYRLDAIMAGGLFDEIIDPLIA 343


>gi|302842492|ref|XP_002952789.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
 gi|300261829|gb|EFJ46039.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
          Length = 415

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/342 (30%), Positives = 181/342 (52%), Gaps = 14/342 (4%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--D 80
              L  K  DP +  N  E + + +    L+  ++  +  +D         E    E  D
Sbjct: 65  FKELQMKMADPEVAANSTEFQKVAKAAADLEETVNAYRTYKDTEKQLSDASEYLKNEAAD 124

Query: 81  DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +     +  +++ +   Q     + +     D  +  LE+ AGAGG E+  WA  
Sbjct: 125 DPEMAEFARAEIAELEVSLAQLQDKLRLQLVPKDPLDDRNIMLEIRAGAGGDEASIWAGD 184

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           ++RMY R+A ++ +K   +    GE  G K   L I G + Y  LK E GVHR+ R+   
Sbjct: 185 MMRMYQRYANRQGWKASLVSCTQGESGGYKEVILEISGTSVYSKLKWEAGVHRVQRVPAT 244

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P V + ++++I+ S+  +   RASGAGGQ+VN  ++AV + H P
Sbjct: 245 EAAGRVHTSTATVAVMPEV-EDVDVQINPSEIEVKFARASGAGGQNVNKVETAVDLMHKP 303

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V CQ+ER+Q +NK +A+ +LRAKLYE+E+  + + A I  + K+++G G    +I+
Sbjct: 304 TGIRVFCQEERTQAQNKERAFQILRAKLYEMEI--QRQQAEIYAARKSQVGTGDRSEKIK 361

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y  +    V D R   +    + VL+GDL+D ++A ++  +
Sbjct: 362 TYNYKDS-RVSDHRIK-QNFDLNSVLEGDLEDSLQAMISADQ 401


>gi|328954736|ref|YP_004372069.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
 gi|328455060|gb|AEB06254.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
          Length = 355

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 174/352 (49%), Gaps = 14/352 (3%)

Query: 13  LFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D    + +    L  K  DP +  +  E   L +E  +  + ++  +       D   
Sbjct: 1   MLDKLKKLIKAYEDLEKKLSDPAVMGDQKEYTRLAKEHANQADLVAMARAYVTAYDDIEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGG 127
             E+  EE D         ++   + ++     + + +L      D  +  +E+ + AGG
Sbjct: 61  AKEMLHEETDAQSKAMLLADISENEAKIPGLENEIKVMLIPGDPNDEKNTIMEIRSAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L +MY R+ E  ++K E L     E  G KS    + G   Y  +K E GV
Sbjct: 121 DEAAIFAGDLFKMYERFFEAHRWKMELLSASPSEAGGFKSIEFKVSGDKVYSLMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R  TS +++ V P   D I+I+I + D RIDTY ASG GGQ VNTT 
Sbjct: 181 HRVQRIPKTESQGRIQTSTATVAVLPEA-DEIDIKIDQGDLRIDTYCASGPGGQCVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VVQ Q++RSQ +N+     MLRA+LYE EL   ++ A +G   +++IG
Sbjct: 240 SAVRITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEREL--EQQQAELGAERQSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
            G    +IR+Y  QP   V D R     ++ + VL GD L   + A  A  +
Sbjct: 298 RGNRSEKIRTYN-QPQDRVTDHRIGF-SSTYNGVLLGDQLATVINALSAADR 347


>gi|319957818|ref|YP_004169081.1| bacterial peptide chain release factor 1 (brf-1) [Nitratifractor
           salsuginis DSM 16511]
 gi|319420222|gb|ADV47332.1| bacterial peptide chain release factor 1 (bRF-1) [Nitratifractor
           salsuginis DSM 16511]
          Length = 355

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 25/345 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILL---- 73
            R   +N     P +  +V +   L +E+  +   +       EI + + +N  +L    
Sbjct: 11  DRYEEINRLLSSPEIAADVKKMTELSKEQSSIAPLVEKAQKYLEISEAIEENKAMLSDPE 70

Query: 74  --ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA EE     L E    L R++ E++      +     D  + YLE+ AGAGG ES 
Sbjct: 71  FGELAKEE-----LSELEPQLPRLEEEIKVL---MIPKDPNDDKNIYLELRAGAGGDESA 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + +MY R+AE++ +K E +   +G   G K    L+KG   Y  LK E G HR+ 
Sbjct: 123 LFVEDMFKMYLRFAERQGWKVEIVSSSEGTAGGYKELIALVKGEGVYSKLKFEAGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P V + +EI+I  ++ ++D YR+SG GGQ VNTTDSAVR
Sbjct: 183 RVPATETQGRVHTSAITVAVIPEV-EDVEIDIKPNEIKMDVYRSSGCGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q E+SQHKN+ +A  +L+A++   E   RE++       K ++G G  
Sbjct: 242 LTHLPTGIVVAIQDEKSQHKNRDKAMKVLKARV--HEAMMREQMEETAGQRKLQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R  +   +  DV+ +G L+  +   +A
Sbjct: 300 SEKIRTYNY-PQNRITDHRIGLTLYALDDVMNNGTLEQVIDPLIA 343


>gi|297568589|ref|YP_003689933.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
 gi|296924504|gb|ADH85314.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
          Length = 357

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 172/342 (50%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L  +  DP L Q+    K L +E   +               D     +L
Sbjct: 5   LADIKDRKKNLEDRLSDPDLMQDPARFKGLAKEHAQVSKLDDLYARYLKAQHDFAANRQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  +L         ++  +   +       L     D  +  LE+ AG GG E+ 
Sbjct: 65  IEEEEDEEMLALARAENGELRESIAVLEKELRLALLPKDPNDEKNVLLEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY+R+AE+  +K E L  +     G K    LI G + Y  LK E GVHR+ 
Sbjct: 125 LFVADLFRMYSRYAEQLGWKVETLSSNPIGIGGYKEIIALISGEHVYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +E++I+ S+ + D +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPATETQGRVHTSAVTVAVLPEA-EEVELKINPSELKFDVFRSSGPGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++E+   I    K+++G G  
Sbjct: 244 VTHLPTGLVVSCQDEKSQHKNKAKALQVLRARL--LDKLQQEQHDQISSDRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             ++R+Y   P   + + R N+      DV+ G LD+ ++  
Sbjct: 302 SERVRTYNF-PQNRLTEHRINLTIYRLDDVMMGHLDEVVEPL 342


>gi|51598456|ref|YP_072644.1| peptide chain release factor 1 [Borrelia garinii PBi]
 gi|61214604|sp|Q662G9|RF1_BORGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51573027|gb|AAU07052.1| peptide chain release factor 1 [Borrelia garinii PBi]
          Length = 357

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 128/345 (37%), Positives = 199/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  +  K +D +L +N  +   +++E  +L+   +     ++I  ++ DN  +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|149914649|ref|ZP_01903179.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
 gi|149811442|gb|EDM71277.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
          Length = 351

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 177/339 (52%), Gaps = 10/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L  +        ++     L RE   L   +  I+  +  L D      +
Sbjct: 9   LNEILQRFEYLEAQMSAGG--GDIA---KLGREYAELRPVVEEIRAYRQVLDDLEAARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    LQ  K    E  Q   L   +AD+  A LE+  G GG E+  +A
Sbjct: 64  LADPEMRDLAEEELTALQARKPKLEEQLQLALLPKDKADARPAILEIRPGTGGEEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E ++ E  GIK     + G + +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYHRYAEARGWSFEIIEQNETELGGIKEVIARVAGDHVFARLKFESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++++I   D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLPEA-EDVDVQIDPGDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+  +  +   +++   G    +IR
Sbjct: 243 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRAADERSASRAAQVGTGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 302 TYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALRA 339


>gi|225436757|ref|XP_002269884.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086617|emb|CBI32252.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 187/348 (53%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A +    L+ K  DP +  N  E + L +    LD  +S  K  +D          L
Sbjct: 53  LESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAKAL 112

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
           A E+  D  + +  +  +  +  +++  +       L S   DS +  LEV AG GG E+
Sbjct: 113 AKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDEA 172

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY +++E+  +K   +   + E+ G K+  L +KG   Y  LK E GVHR+
Sbjct: 173 GIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRV 232

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 233 QRVPQTETQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 291

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q +N+++A  +LRAKLYE+++++++E+  I    K+++G G 
Sbjct: 292 DLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQEL--IRNQRKSQVGTGA 349

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +     +  LDGD++  +++ +A+++
Sbjct: 350 RAEKIRTYNYKD-NRVTDHRLKM-NFELTSFLDGDIETAVQSCVAMEQ 395


>gi|219684506|ref|ZP_03539449.1| peptide chain release factor 1 [Borrelia garinii PBr]
 gi|219671868|gb|EED28922.1| peptide chain release factor 1 [Borrelia garinii PBr]
          Length = 357

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 130/345 (37%), Positives = 199/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  L  K +D +L +N  +   +++E  HL+   +     ++I  ++ DN  +
Sbjct: 6   LNSATSKIKSLEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKREDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [Mycobacterium intracellulare ATCC
           13950]
          Length = 357

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 122/333 (36%), Positives = 173/333 (51%), Gaps = 11/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   +   +++     D     EL
Sbjct: 8   IDVLLAEHADLERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLEAAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E SD L+    E++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  AA--DDDSFAAEASD-LESRVAELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR
Sbjct: 125 ADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVQIDESDLRIDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++    A+   +S+   +  
Sbjct: 245 VRITHLPTGIVVTCQNERSQLQNKARALQVLAARLQSLAEEQALADASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             +IR+Y   P   + D R N +  +   VLDG
Sbjct: 305 SERIRTYNF-PENRIADHRINFKSHNLDQVLDG 336


>gi|21910335|ref|NP_664603.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS315]
 gi|28895910|ref|NP_802260.1| peptide chain release factor 1 [Streptococcus pyogenes SSI-1]
 gi|25091126|sp|Q8K7I2|RF1_STRP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21904531|gb|AAM79406.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS315]
 gi|28811160|dbj|BAC64093.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           SSI-1]
          Length = 359

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|119358446|ref|YP_913090.1| peptide chain release factor 1 [Chlorobium phaeobacteroides DSM
           266]
 gi|166223545|sp|A1BJT9|RF1_CHLPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119355795|gb|ABL66666.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 357

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 190/345 (55%), Gaps = 9/345 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +FD      ++   L  +  DPH  ++    + L +E + L + +         + +L +
Sbjct: 1   MFDKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDLCSIVEAYDRYALAKKQLEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGG 127
           + +LL+   E+D  +++Q+   +LQ   LE E +    LL   E DS +  +E+ AG GG
Sbjct: 61  SRLLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ +K E L+ ++     G +   L + G + YG +K E G
Sbjct: 121 EEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLPEA-EEVDVEIRKDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH P+G+VV CQ+ERSQ +NK +A  MLRAKLY+ +L +++E       S    
Sbjct: 240 ETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGLRRSMVTT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R      +   ++ GD+ D ++A 
Sbjct: 300 GDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGDIKDIIEAL 343


>gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rhodococcus jostii RHA1]
 gi|119361595|sp|Q0SGN8|RF1_RHOSR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110818014|gb|ABG93298.1| peptide chain release factor RF1 [Rhodococcus jostii RHA1]
          Length = 359

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 178/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+   +    L   ++   +++    D     EL
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPIMATYAKLKSAQDDLDAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E    L+   LE++    + L      D +D  LEV +G GG ES  +A
Sbjct: 70  AA--DDSSFAAEV-PELEAQVLELDKALTDLLAPRDPHDGDDVVLEVKSGEGGEESALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
           + L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR
Sbjct: 127 SDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +  
Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R   +  +   VLDG+LD  + A 
Sbjct: 307 SERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDAL 347


>gi|224417848|ref|ZP_03655854.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
          Length = 356

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 171/338 (50%), Gaps = 11/338 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R   ++       +  ++     L +E+  L+  +   K+    L        L    D
Sbjct: 11  DRYDEISNLLIQTEILSDIKRMTELSKEQSDLEKLVQKSKQYLKNLESIEENKGLL---D 67

Query: 81  DCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +     + ++  +LE +  + E     L     D  + YLE+ AG GG E+  +   
Sbjct: 68  DKELGDLAKEEIKEAELENQNLESEIKILLLPKDPNDEKNIYLELRAGTGGDEAGIFVGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+AE + +K E +   +    G K    LIKG  AY  LK E G HR+ R+   
Sbjct: 128 LFKAYIRYAESKGWKVEIISSSENNVGGYKEVIALIKGKGAYSRLKFEGGTHRVQRVPET 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P V D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITHIP
Sbjct: 188 ESQGRIHTSAITVAIMPEV-DDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSY 315
           TG+ V  Q E+SQHKNK +A  +L+A++YE EL+ + E+ A   +S         +IR+Y
Sbjct: 247 TGISVSMQDEKSQHKNKDKALKILKARIYEAELEAQMEQNAEARKSQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
              P   + D R  +   S  +++ +GDLD  ++  +A
Sbjct: 307 NY-PQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIA 343


>gi|282899982|ref|ZP_06307943.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195252|gb|EFA70188.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 364

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 184/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP   ++  E + + + R  L+  +   +  ++   + +   ++
Sbjct: 10  LKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVIAYETWKNSQEELVGARQI 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E + D  + +  +  ++ ++ ++E+ +       L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNGDPELHEMATMEVKDLENKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + ++ + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESPGEMGGFKEVILEIQGDSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMPEV-DDVEVHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L  RE+   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKL--REQQEAVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  + S VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKDS-RATDHRLG-QNFTLSPVLEGDLETLIQSCISQDQ 352


>gi|213962214|ref|ZP_03390478.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
 gi|213955220|gb|EEB66538.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
          Length = 357

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 171/348 (49%), Gaps = 8/348 (2%)

Query: 13  LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  N   QR   ++     P +  +      L +E + L   +   +E  +   +   
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDVIADQKRYIQLNKEYKDLKELMDKREEYINVTGNLAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L   K  +   + E     +     D+ +A +E+ AG GG
Sbjct: 61  AEEIIADGSDAEMVEMAKLQLDESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ + + + T  ++ ++G   G K     + G N YG LK E GV
Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  ++E++ +D  I    ++G GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEA-EEFDVELNMADVNIIRTTSTGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+++ HIPTG+ V+CQ E+SQHKN  +A  +LR++LYELEL K+ E  +    S    G
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYELELAKKMEADSARRKSMVSSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D R  +      +V++GD+   +      +
Sbjct: 300 DRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346


>gi|315023545|gb|EFT36549.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM]
          Length = 362

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 97/344 (28%), Positives = 167/344 (48%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +      L +E   L   +    E    L       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVFDEYSTALNAIKEADEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  ++       Q     +    E  ++  +    AD  +  +E+ AG GG ES 
Sbjct: 69  IADGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTGGDESA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + + + +K E  + ++  + G K   + ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDVYRMYTMYFKSKGWKHEVTDSNEASK-GYKELIMRVEGDGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLPEA-EEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH PTG+VV CQQ RSQ  N+  A  MLR KLY++ELQK + +IA   ++  +      
Sbjct: 247 LTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQGDIAAQRKTMVSTGDRSA 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R N    +  + ++GD+ + + A +  +
Sbjct: 307 KIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAE 349


>gi|139439315|ref|ZP_01772757.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
 gi|133775339|gb|EBA39159.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
          Length = 355

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 117/334 (35%), Positives = 182/334 (54%), Gaps = 12/334 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  K  DP +  ++ E   L +E  H  + I+  +E    L D     E+
Sbjct: 5   LEKIIKAYEELEKKLSDPAVASDIKEFTRLNKEYAHQSDLIAASREYIGALDDIEAAKEM 64

Query: 76  ALE---EDDCSILQE-TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +    D+  +LQ   S+N +++    E  ++  + S   D  +  +E+ + AGG E+ 
Sbjct: 65  LRDTTDADEKEMLQMDISENEEKLPQLEEDIKYMLIPSDPNDDKNTIVEIRSAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E R +KT  L+    E  G KS    ++G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLYKMYQRFCESRGWKTTVLDSSPSEAGGFKSIEFKVEGDRVYSVMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   + I+++I++SD RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLPEA-EEIDVQINQSDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q++RSQ +N+     MLRA+LYE+EL+K++  A +G   +++IG    
Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERQSQIGHGNR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             +IR+Y  QP   V D R     ++ + VL GD
Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGF-NSTYNGVLLGD 333


>gi|283768251|ref|ZP_06341164.1| peptide chain release factor 1 [Bulleidia extructa W1219]
 gi|283105128|gb|EFC06499.1| peptide chain release factor 1 [Bulleidia extructa W1219]
          Length = 358

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/339 (32%), Positives = 170/339 (50%), Gaps = 6/339 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              QR   +     D  ++ N      L +E+  L  A+    +++          E+  
Sbjct: 10  GMDQRYQTITNDLMDEKVFSNPALLTKLSKEQASLTQAVEAWHKLKALDERIEQANEMMK 69

Query: 78  EEDDC--SILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D     I +   +    ++ E+ E+ Q   +     D +D  +E+  GAGG E   +A
Sbjct: 70  ESDVELKEIAKMELEECLPVQEELLEHIQHLLIPKDPDDDHDVIMEIRGGAGGDEGNIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE + +K + +E    E  G       IKG   Y  LK E GVHR+ R+ 
Sbjct: 130 GDLYRMYTRYAESKGWKVQVMETSISEAGGFSQVIFSIKGNEVYRDLKWESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++   P  +++ +IEI  +D  I+T+RASGAGGQH+N TDSAVRI H
Sbjct: 190 KTESQGRVHTSTATVLCQPEAEEA-DIEIDPADLTIETHRASGAGGQHINKTDSAVRIVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+ V CQ+ RSQ +N+  A  ++RA++YE   ++R+E A     +K   G    +IR
Sbjct: 249 VPTGITVNCQEGRSQIENRETAMRLIRARVYEEIKRQRDEEAGAARRAKIGTGDRSEKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   V D R  +  T    +++G LD  +    A
Sbjct: 309 TYNY-PQNRVTDHRIGLTITQLDRIMEGKLDGIIAGLQA 346


>gi|116618873|ref|YP_819244.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270927|sp|Q03VA1|RF1_LEUMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116097720|gb|ABJ62871.1| bacterial peptide chain release factor 1 (bRF-1) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 356

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 163/338 (48%), Gaps = 10/338 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              LN +  DP +  N      L +E   +   +      +  + D     EL     D 
Sbjct: 15  YDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQDAEELL---GDA 71

Query: 83  SILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            +     ++L  +K E E  +       L     D  +  +E+   AGG ES  +A  LL
Sbjct: 72  EMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFAADLL 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY R+AE++ +    ++    E  G K   ++I G N Y  LK E G HR+ R+   ++
Sbjct: 132 DMYRRYAERQNWSMSIIDESTTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVPATET 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H PTG
Sbjct: 192 QGRVHTSTATVGVMPEF-EEIDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIHKPTG 250

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVL 317
           ++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E E A   +S+        +IR+Y  
Sbjct: 251 IMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESEYAAQRKSAVGTGDRSERIRTYNY 310

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            P   V D R  +       +++G+L + + A +   +
Sbjct: 311 -PQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQ 347


>gi|307154812|ref|YP_003890196.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
 gi|306985040|gb|ADN16921.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 180/341 (52%), Gaps = 13/341 (3%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DD 81
              L  +  DP +  N  E + + + R  L+  ++  +  Q    +     ++  E   D
Sbjct: 17  YRELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEELAGARQILKESAGD 76

Query: 82  CSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWANML 137
             + +  +  +Q ++ ++E  +       L     D  +  LE+ AG GG E+  WA  L
Sbjct: 77  LELREMAALEVQELEQQLETLESRLKVLLLPRDPNDDKNIMLEIRAGTGGDEASIWAGDL 136

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY+R+AE +++  + +     +  G K A L I+G + Y  LK E GVHR+ R+   +
Sbjct: 137 VRMYSRYAESQRWAVKLVSESLADMGGFKEAILEIQGDSVYSKLKFEAGVHRVQRVPVTE 196

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS +++ + P V D +E++I   D  I T R+ GAGGQ+VN  ++AV + H PT
Sbjct: 197 AGGRVHTSTATVAIMPEV-DEVEVQIDPKDLEISTARSGGAGGQNVNKVETAVDLFHKPT 255

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ + C +ERSQ +N+ +A  +LRAKLYE++L  RE+   +    ++++G G    +IR+
Sbjct: 256 GIRIFCTEERSQLQNRERAMQILRAKLYEMKL--REQQEAVSSMRRSQVGTGSRSEKIRT 313

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y  +    V D R   +  S    L+GD+D+ +++ ++  +
Sbjct: 314 YNYKD-NRVTDHRLG-QNFSLVGALEGDIDEIIQSCISRDQ 352


>gi|170017816|ref|YP_001728735.1| peptide chain release factor 1 [Leuconostoc citreum KM20]
 gi|238692786|sp|B1MVN7|RF1_LEUCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169804673|gb|ACA83291.1| Peptide chain release factor 1 [Leuconostoc citreum KM20]
          Length = 357

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 168/345 (48%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L +E   +   +      Q  L D     +L
Sbjct: 8   LQTVVDRYDELNEQLADPEIAGDGQKYMALSKEAGEMRETVETYLHYQQVLQDIADAEDL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     ++L  +K E E  + +     L     D  +  +E+   AGG ES 
Sbjct: 68  L---DDAEMAPLAKEDLNTLKPEKEALESQLKILMLPKDPNDDKNIIMEIRGAAGGDESS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAADLLDMYRRYAEKQRWTLSIIDETLTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR
Sbjct: 185 RVPATETQGRVHTSTATVGVMPEFQE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           + H PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E   A   +S+        
Sbjct: 244 LVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       V++G+L + + A +   +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALVIADQ 347


>gi|146300308|ref|YP_001194899.1| peptide chain release factor 2 [Flavobacterium johnsoniae UW101]
 gi|146154726|gb|ABQ05580.1| bacterial peptide chain release factor 2 (bRF-2) [Flavobacterium
           johnsoniae UW101]
          Length = 254

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 128/247 (51%), Positives = 182/247 (73%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LS E DS  A +++ AGAGGTES DWA ML+RMY  W E   +K + L   +G+ AGIK
Sbjct: 1   MLSDEGDSLSAVVQITAGAGGTESCDWAGMLMRMYMMWGESYGYKIKELNFQEGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           + TL  +G  ++G+LKGE GVHRLVRISP+DSN++RHTSF S++VYP+VDDSIEI+I+ +
Sbjct: 61  TVTLEFEGDYSFGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDSIEIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  I T R+SGAGGQ+VN  ++ V++ H PTG+ +QC + RSQ  N+ +A  MLR++LYE
Sbjct: 121 DIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQIQCSETRSQQDNRQRAMQMLRSQLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +EL+K++      E+ K +I WG QIR+YV+QPY++VKD+RT  E +    V++G++D F
Sbjct: 181 IELKKQQAQRADIEAGKMKIEWGSQIRNYVMQPYKLVKDVRTGYETSDVDGVMNGNIDAF 240

Query: 347 MKATLAI 353
           +KA L +
Sbjct: 241 LKAYLMM 247


>gi|289549312|ref|YP_003474300.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
 gi|289182929|gb|ADC90173.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
          Length = 359

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 114/338 (33%), Positives = 180/338 (53%), Gaps = 10/338 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A +R   L  +  DP + ++ ++   + +E + L+      +E +  L +     EL   
Sbjct: 13  AEKRYLQLQAEVLDPDIVKDRLKFAQISKELKELEELHRLHQEYRKILKELEETKELLKN 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
                +     + ++R++ E+E  +       L   E DS +  LE+ AG GG E+  +A
Sbjct: 73  ---PELEPLAKEEIKRLEKELESTEKRIKIHLLPKDERDSKNVILEIRAGVGGEEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AE++ +K   L        G K    L++G  AY  LK E GVHR+ R+ 
Sbjct: 130 RDLLHMYQRYAEEKGWKFSILSAQKTGLGGYKEVIALVEGEGAYSRLKYESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  D++ E+ I   D +I+T+RAS AGGQ+VNTT++AVRITH
Sbjct: 190 VTEAGGRIHTSTATVAVLPEADET-EVHIDPKDLKIETFRASSAGGQYVNTTETAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+VV CQ ERSQ++N+ +A  +L A+L +  + QKREE+A              +IR
Sbjct: 249 LPTGIVVTCQDERSQYQNRMKALKILYARLKDFYDRQKREELAKEKREQIGTGERSEKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y       V D R N+      DVL+G LD+ + A +
Sbjct: 309 TYNFI-QNRVTDHRINLTIYRLQDVLEGKLDEIIDALI 345


>gi|56808656|ref|ZP_00366381.1| COG0216: Protein chain release factor A [Streptococcus pyogenes M49
           591]
 gi|71903502|ref|YP_280305.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS6180]
 gi|71910676|ref|YP_282226.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS5005]
 gi|209559423|ref|YP_002285895.1| peptide chain release factor 1 [Streptococcus pyogenes NZ131]
 gi|119361623|sp|Q48TL0|RF1_STRPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238054473|sp|B5XLI8|RF1_STRPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71802597|gb|AAX71950.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS6180]
 gi|71853458|gb|AAZ51481.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS5005]
 gi|209540624|gb|ACI61200.1| Peptide chain release factor 1 [Streptococcus pyogenes NZ131]
          Length = 359

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|332877766|ref|ZP_08445507.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684346|gb|EGJ57202.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 357

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 171/348 (49%), Gaps = 8/348 (2%)

Query: 13  LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  N   QR   ++     P +  +      L +E + L   +   +E      +   
Sbjct: 1   MLDKLNIVKQRFDEISDLIIQPDIIADQKRYIQLNKEYKDLKELMDKREEYITVTGNLSE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L+  K  +   + E     +     D+ +A +E+ AG GG
Sbjct: 61  AEEIIADGSDPEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ + + + T  ++ ++G   G K     + G N YG LK E GV
Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  ++E+  +D +I    ++G GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVIVLPEA-EEFDVELDMADVKIIRTTSTGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+++ HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E  +    S    G
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D R  +      +V++GD+   +      +
Sbjct: 300 DRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346


>gi|163840178|ref|YP_001624583.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
 gi|189039986|sp|A9WNB3|RF1_RENSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|162953654|gb|ABY23169.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
          Length = 360

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 112/355 (31%), Positives = 177/355 (49%), Gaps = 16/355 (4%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
              + GL D        + L  +  DP +  +   A+ L R    L   +    ++Q   
Sbjct: 2   FESIQGLLD------EHADLQIRLSDPAVHADQSLARKLGRRYAELSTIVEGYHQVQQLS 55

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D     E+A E  D     E     +++    E  +   +     D  D  LEV AG G
Sbjct: 56  DDLAAAKEMASE--DSEFAAEVPVLEEQLAHAQEKLRRLLIPRDPDDGRDVILEVKAGEG 113

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGW 180
           G ES  +A  L+RMY+R+AE + +K E +   + +  G K   + +KG         +  
Sbjct: 114 GDESALFAADLVRMYSRYAESKGWKIEVISATESDLGGYKDIQIAVKGRSNDPAEGVFAA 173

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   +S  R HTS + + V+P VD+  E+EIS++D +ID YR+SG GG
Sbjct: 174 LKFEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGG 233

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIG 299
           Q VNTTDSAVRITH PTG+VV  Q E+SQ +N+     +LRA++   + +  + E + + 
Sbjct: 234 QSVNTTDSAVRITHFPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQELIDAENSAVR 293

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +S    +    +IR+Y   P   + D RT  +  +   V++GDL   +++ + + 
Sbjct: 294 KSQIRTMDRSERIRTYNF-PENRIADHRTGYKSYNLDAVMNGDLGPVIQSAIEMD 347


>gi|85705322|ref|ZP_01036421.1| peptide chain release factor 1 [Roseovarius sp. 217]
 gi|85670195|gb|EAQ25057.1| peptide chain release factor 1 [Roseovarius sp. 217]
          Length = 426

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 175/342 (51%), Gaps = 16/342 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  F+  +        ++     L RE   L   +  I+  +  L D      +
Sbjct: 85  LQQIAERFEFIEAQMMQGG--GDIAR---LGREYSELRPLVEEIRAYRQILADIEGARAM 139

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D L+ ++  +       Q   L   EA++  A LE+  G GG E+ 
Sbjct: 140 L---GDPEMRDLARDELEVLEARLPGMEAALQLALLPRDEANARPAILEIRPGTGGEEAA 196

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY R+AE R +  + +E    E  GI+   + IKG   +  LK E GVHR+ 
Sbjct: 197 LFAADLMRMYQRYAEARGWVFDVIEEQQSELGGIRELVVHIKGEGVFARLKFESGVHRVQ 256

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++++I+ +D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 257 RVPETESGGRIHTSAATVAVLPEA-EDVDVQINPNDLRIDTMRSSGAGGQHVNTTDSAVR 315

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+G+VV    E+SQH+N+  A  +L+++L+++E  + +   +   +++   G    
Sbjct: 316 ITHIPSGIVVTSS-EKSQHRNREIAMQVLKSRLFDMERSRVDSERSANRAAQVGSGDRSE 374

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 375 RIRTYNF-PQGRMTDHRINLTLYKLEQVMGGDLDEVIDALTA 415


>gi|261366981|ref|ZP_05979864.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
 gi|282571098|gb|EFB76633.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
          Length = 359

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 170/347 (48%), Gaps = 7/347 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
                  +R   L  +   P           +M++ + L   +   +             
Sbjct: 5   LQLHEVERRYEELAYRMSAPDAAAQPDVYARMMKDYKELTPLVEEYRRYTSLQQQQTETN 64

Query: 74  ELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           EL  +E D +        L  I   +    E  +   L     D  +  LE+ AGAGG E
Sbjct: 65  ELVQQETDPAFKAMVQQELCEIARNLAQSEENLRLLLLPKDADDEKNVILEIRAGAGGEE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A+ L RMYT +A KR +  + +  ++ E  G+K     ++G + Y  LK E GVHR
Sbjct: 125 AALFAHSLWRMYTMYASKRGWSCQTISANETELGGVKEVVFSVEGADVYSRLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS  ++ V P   + +E+E+   D RIDT+R+SGAGGQH+N T SA
Sbjct: 185 VQRVPETETQGRIHTSTVTVAVMPEA-EEVELELDPKDLRIDTFRSSGAGGQHINKTSSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           +R+TH+PTG+VV+CQ +RSQ +NK +A  +LR++L + + Q  +E  N    S+   G  
Sbjct: 244 IRVTHLPTGMVVECQDQRSQRENKERALTVLRSRLLQQKQQAYDEAYNEKRQSQVGTGDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +   +   VLDGDLD  ++  +   +
Sbjct: 304 SEKIRTYNF-PQDRVTDHRIGLTLRNLQGVLDGDLDRVLEPLILADR 349


>gi|332523754|ref|ZP_08400006.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315018|gb|EGJ28003.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 359

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +  + ++  ++ ++ +       E+
Sbjct: 7   LQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEANTRDTVTTYRQYKEIIQSIADAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  I +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDAEIEEMAKEELKESKAAKENYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EDVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALIMYDQ 350


>gi|291298828|ref|YP_003510106.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568048|gb|ADD41013.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
          Length = 367

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 169/348 (48%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   S L  +  DP +  +   A+ + R    L    +   E+     D     EL
Sbjct: 10  LAVLLAEHSELEKQLADPSIHADAALARRVGRRYAELSPIAACNAELDTVKEDLAAAEEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A   DD     E +   +RI    E      L     DS D  +E+ AG GG ES  +A 
Sbjct: 70  AG--DDPEFAAEATALRERIPQLEEKLAELLLPRDPDDSRDVIIEIKAGEGGAESALFAA 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMY R+AEK  +  E ++  + E  G+K  ++ +K       G   +  +K E GVH
Sbjct: 128 DLLRMYLRYAEKHGWVAEIMDSQESEMGGVKDVSVAVKTKGNPEGGHGVWSRMKFEGGVH 187

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI+  + RID YR+SG GGQ VNTTDS
Sbjct: 188 RVQRVPVTESQGRIHTSAAGVLVMPEA-EEVDVEINMHELRIDVYRSSGPGGQSVNTTDS 246

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITHIPTGVV  CQ E+SQ +NK  A  +LRA+L   + ++ E  A     S+   + 
Sbjct: 247 AVRITHIPTGVVASCQNEKSQLQNKEAAMRILRARLLAAKQEEAEAAAGAARKSQVRTVD 306

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++R+Y   P   V D R      +   V+ GD+D  + A    ++
Sbjct: 307 RSERVRTYNF-PQNRVTDHRIGYTSHNLDQVMQGDMDGVLDALATAER 353


>gi|71892127|ref|YP_277859.1| peptide chain release factor 1 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|119361510|sp|Q492V8|RF1_BLOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71796233|gb|AAZ40984.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 360

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 175/338 (51%), Gaps = 7/338 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R + L      P+   +      L +E   L   +   +   D   + +   +L  
Sbjct: 11  ALQERFNVLEKLLSKPNAIDDKKHFCTLAKEHARLSEIVVCFERWLDIKQEIINTKKLLE 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + D   I Q+        +  +E   +   L +   D    ++E+ AG GG E+  +   
Sbjct: 71  DVDMHDIAQDELKTFYLNRNNIEKNLKILLLPTDSNDKLGCFIELRAGTGGKEAAIFTGE 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R++E R++K E +    GE  G K     I    AY  LK E G HR+ RI   
Sbjct: 131 LFRMYVRYSEVRRWKMEIINATYGECGGYKEIIAKIPYRGAYSLLKFESGGHRVQRIPHT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  +I V P + D     I   D RIDT+R+SGAGGQHVNTTDSA+RITH+P
Sbjct: 191 ESQGRIHTSTCTIAVIPEIPDIELPSIDPHDLRIDTFRSSGAGGQHVNTTDSAIRITHVP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VV+CQ ERSQHKNKA+A ++L ++L+ +E+++R++   +  + +  +G G    +IR
Sbjct: 251 SGLVVECQDERSQHKNKAKALSVLGSRLHAIEMKRRQQ--EVSCTRRNLLGTGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y  Q    + D R +      +++++G+LD  ++  +
Sbjct: 309 TYNFQ-QGRITDHRISFTSYKLNEIMNGELDLLIQPII 345


>gi|309803264|ref|ZP_07697361.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|309805669|ref|ZP_07699710.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|309806347|ref|ZP_07700360.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|309809934|ref|ZP_07703782.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871919|ref|ZP_07732001.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|312873839|ref|ZP_07733882.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|329921112|ref|ZP_08277635.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
 gi|308164772|gb|EFO67022.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|308165029|gb|EFO67271.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|308167331|gb|EFO69497.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|308169722|gb|EFO71767.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|311090621|gb|EFQ49022.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|311092496|gb|EFQ50858.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|328935019|gb|EGG31508.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
          Length = 362

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +    ++ EV       +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +   +         G    
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G+L+D + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISALV 346


>gi|259501685|ref|ZP_05744587.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|302191107|ref|ZP_07267361.1| peptide chain release factor 1 [Lactobacillus iners AB-1]
 gi|309808088|ref|ZP_07702006.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|312874655|ref|ZP_07734679.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315653748|ref|ZP_07906668.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325913047|ref|ZP_08175420.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
 gi|259166970|gb|EEW51465.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|308168690|gb|EFO70790.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|311089885|gb|EFQ48305.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315489110|gb|EFU78752.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325477727|gb|EGC80866.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
          Length = 362

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +    ++ EV       +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +   +         G    
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G+L+D + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISALV 346


>gi|89054297|ref|YP_509748.1| peptide chain release factor 1 [Jannaschia sp. CCS1]
 gi|119361551|sp|Q28RD9|RF1_JANSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88863846|gb|ABD54723.1| bacterial peptide chain release factor 1 (bRF-1) [Jannaschia sp.
           CCS1]
          Length = 354

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 179/346 (51%), Gaps = 20/346 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
               R  +L  +    P    +  +   + RE   L   ++ I   +  L D      + 
Sbjct: 12  QITDRFEYLEAQLNGGP----DPSDIAKISREYAELKPVVAEIAGYEQLLADMAEAQNML 67

Query: 77  LEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D  +     + L R++  +    +  Q   L    AD+  A +E+  G GG E+  
Sbjct: 68  A---DPDMRPLAEEELPRLEAAIPAAEQSLQLALLPKDAADAKPAMIEIRPGTGGDEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMYTR+AE R ++ E +++ + +  GIK  T  ++G N +  LK E GVHR+ R
Sbjct: 125 FAGDLLRMYTRYAEARGWRLEIVDLQESDLGGIKECTARVEGENVFARLKFESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++I+I  +D RIDT RASGAGGQHVNTTDSAVRI
Sbjct: 185 VPETESGGRIHTSAATVAVLPEA-EDVDIDIPATDIRIDTMRASGAGGQHVNTTDSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV    E+SQH+N+  A   LR +LY+LE   ++    +    K +IG G   
Sbjct: 244 THVPSGIVVVSS-EKSQHRNREIAMQTLRTRLYDLER--QKADDAMAADRKAQIGSGDRS 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       V+ GDLD+ + A  A  +
Sbjct: 301 ERIRTYNF-PQGRMTDHRINLTLYKLDAVMLGDLDEIVDALTAEDQ 345


>gi|296121187|ref|YP_003628965.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
 gi|296013527|gb|ADG66766.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
          Length = 363

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 168/345 (48%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  + +DP +  +V +   + RE   L    S ++E      D L    +
Sbjct: 9   LQAKLARFEELEAQLQDPEVLADVSKMLEIQREHGGLSKIASTVREFNTLQDDLLAAETM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLS--GEADSNDAYLEVHAGAGGTESQ 131
             E  D    +     +  +K   E    + E +++           +E+ AG GG E+ 
Sbjct: 69  LAEATDDETKEIAQAEIDELKPRFEPLKTELEDMVTAGDSLTRGSLIMEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MYTR+ + + +K E +E+   E  G+K   + I G  AY  L+ E G HR+ 
Sbjct: 129 LFARDLYEMYTRYVDLQGWKYEVMELTTSELGGLKEVVITITGSGAYHRLQFESGGHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V     + I++EI + D RIDT RA G GGQ VN T+SAVR
Sbjct: 189 RVPETETQGRVHTSAATVAVMAEASE-IDVEIRDEDLRIDTMRAGGPGGQKVNKTESAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIP+G+VV+ Q E+SQHKNKA+A  +LR++L EL   +     A    +         
Sbjct: 248 ITHIPSGLVVRIQDEKSQHKNKAKALRVLRSRLMELRESQAHAVRAEQRRTLVGSGDRSE 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +       ++ G+LD+ +   LA  +
Sbjct: 308 RIRTYNF-PQNRLTDHRIGLTVYKLDQIMQGNLDELINPILAFDR 351


>gi|86132255|ref|ZP_01050850.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
 gi|85817174|gb|EAQ38357.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
          Length = 359

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 99/338 (29%), Positives = 169/338 (50%), Gaps = 8/338 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P +  +      L +E   L   +   +E  +   +     E+  +
Sbjct: 8   VKQRFDEVSDLIIQPDIISDQKRYVSLNKEYSDLKALMDVREEYIELTDNFKEAEEIIAD 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +++      +  K  +   +       +     D+ +  +E+ AG GG E+  +A
Sbjct: 68  GSDAEMVEMAKMQYEEAKSGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             L RMYT++ +    +K   ++  +G   G K     I G + YG +K E GVHR+ R+
Sbjct: 128 GDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEAGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   +  +++I   D R+D + +SG GGQ VNTT SAVR+T
Sbjct: 188 PQTETQGRVHTSAATVMVLPEA-EEFDVQIEPKDVRVDFFCSSGPGGQSVNTTYSAVRLT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQI 312
           HIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +K+EE A    S  +      +I
Sbjct: 247 HIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRNSQVSSGDRSAKI 306

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +      ++++GD+   ++  
Sbjct: 307 RTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKILEEL 343


>gi|197104299|ref|YP_002129676.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
 gi|196477719|gb|ACG77247.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
          Length = 377

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 181/346 (52%), Gaps = 13/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ ++    +   L E+
Sbjct: 27  LDQVLDRFREIEARMGA---ASDGAEIVRLSKEHAELKPVADAVQALERARAEQPELEEM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSN---DAYLEVHAGAGGTESQ 131
           A    D  +     D L+ +K  +   + E  LL    D +    A LEV AG GG E+ 
Sbjct: 84  AA-SGDAEMAALARDELEALKERLPELEREVALLLAPKDKDENASAILEVRAGTGGDEAA 142

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A+ R ++ E   I +G+  G K     I G   +G LK E GVHR+ 
Sbjct: 143 LFAGDLFRMYQRYAQTRGWRVEIDSISEGDAGGYKEIIASITGEGVFGRLKFESGVHRVQ 202

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P V + +EIE+ + D RIDTYR+SGAGGQHVN TDSAVR
Sbjct: 203 RVPATEAQGRIHTSAATVAVLPEV-EDVEIEVRDQDIRIDTYRSSGAGGQHVNKTDSAVR 261

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV    E+SQH+N+A+A  +L+A+LYE + +  +        S+   G    
Sbjct: 262 ITHLPTGIVVTSS-EKSQHQNRARAMKVLKARLYEQQREALDSARAESRKSQVGSGDRSE 320

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +IR+Y   P   V D R N+   + + V++G+ LDD ++  +A  +
Sbjct: 321 RIRTYNF-PQGRVTDHRINLTLYNLAKVMEGEALDDVIEPLIAEDQ 365


>gi|260433480|ref|ZP_05787451.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417308|gb|EEX10567.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 351

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 176/342 (51%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR  +L     D     ++     L +E   L   +  I   +    D      +
Sbjct: 7   LEQITQRFQYLEAAMSDGASGGDIA---ALAKEYSDLKPVVEQIAAWRQLRADLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+    E E+  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LGDPDMKELAEEEIPQLKARIPEAEHALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R ++ E +E    E  GIK     IKG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWQFEIIEEQHTELGGIKEVVAHIKGDNVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLPEA-EDVDIQIDPNDIRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 243 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSERSADRASQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 302 TYNF-PQGRMTDHRINLTLYKLDQIMQGDLDEVIDALTADDQ 342


>gi|75906944|ref|YP_321240.1| peptide chain release factor 1 [Anabaena variabilis ATCC 29413]
 gi|119361508|sp|Q3MF91|RF1_ANAVT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75700669|gb|ABA20345.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena
           variabilis ATCC 29413]
          Length = 366

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 184/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP   +N  E + + + R  L+  ++  +  +    + +   ++
Sbjct: 10  LKSVEQTFNELTRRLADPDTARNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELIGARQV 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
             E + D  + +  +  +  ++ +++Y +       L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNSDPELQEIAALEVNELEEKIKYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + ++ + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGDSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +EI I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMPEV-DEVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L  RE+   +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKL--REQQEEVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  S + VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKDS-RATDHRLG-QNFSLNPVLEGDLETVIQSCISQDQ 352


>gi|329957131|ref|ZP_08297698.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
 gi|328523399|gb|EGF50498.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
          Length = 370

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 172/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +       E  +   + +   DS +A LE+  GAGG E+ 
Sbjct: 71  IANETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +K +    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|319781345|ref|YP_004140821.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167233|gb|ADV10771.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 359

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 177/343 (51%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  V+R   L  +    P           +  E   + + ++ ++ ++    +   L  +
Sbjct: 10  DQVVKRFEMLEAQMSAGPA----PDAYVRMASEYAEIQDMVAKVRALRAAEHEQADLEAM 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +       L  ++  +E      Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  LADRGTDAEMRALAEAELPGVEDRIEALQKDIQILLLPRDAADDKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +R ++ E     DG+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAERGWRFETASASDGDAGGYKEIIATVSGKGVFAHLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++I+I   D RIDT RASG+GGQHVNTTDSAV
Sbjct: 186 QRVPATEASGRIHTSAATVAVLPEA-EEVDIDIRAEDIRIDTMRASGSGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+PTG++V  Q E+SQH+N+A+A  +LRA+LY+LE  K +E  +    S+   G   
Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERGKADEERSESRKSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V+ G+LD+ + A +A
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIINALIA 345


>gi|256820779|ref|YP_003142058.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|315223922|ref|ZP_07865767.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
 gi|256582362|gb|ACU93497.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|314946094|gb|EFS98098.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
          Length = 357

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 171/348 (49%), Gaps = 8/348 (2%)

Query: 13  LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  N   QR   ++     P +  +      L +E + L   +    E  +   +   
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKELMDKRDEYINVTGNLQE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L+  K  +   + E     +     D+ +A +E+ AG GG
Sbjct: 61  AEEIIADGSDAEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ + + + T  ++ ++G   G K     + G N YG LK E GV
Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  ++E+  +D +I    ++G GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVIVLPEA-EEFDVELDMADVKIIRTTSTGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+++ HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E  +    S    G
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYEMELAKKMEADSARRKSMVSSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D R  +      +V++GD+   +      +
Sbjct: 300 DRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346


>gi|15675118|ref|NP_269292.1| peptide chain release factor 1 [Streptococcus pyogenes M1 GAS]
 gi|20139346|sp|Q99ZP5|RF1_STRP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13622277|gb|AAK34013.1| putative peptide chain release factor 1 [Streptococcus pyogenes M1
           GAS]
          Length = 359

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREETNTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|227503858|ref|ZP_03933907.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
 gi|227199481|gb|EEI79529.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
          Length = 358

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   ++   ++     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMGDPEVAGDQKLFRKLSKRYAELRPIVAVNNDLVQARQDLEDAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ D    Q+  D L+ + +E+E K  + L    E DS D  +E+ AGAGG E+  +A
Sbjct: 68  AYEDHD---FQDEVDRLEPLVVELEEKLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+A+K  F+ E L +++ +  G+K  ++  K        A+   K E GVHR
Sbjct: 125 GDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  D+   + I E D R+D YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRIQTSAAGVLVYPEPDEVESVNIDEKDLRVDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           VRITH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A     S    +  
Sbjct: 245 VRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQIEREAREAEAGEQRASQVRTLDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL+GD+ D + A  A ++
Sbjct: 305 SERIRTYNW-PENRITDHRIGYKANNLDAVLNGDMQDLITALQAQER 350


>gi|160891026|ref|ZP_02072029.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270294364|ref|ZP_06200566.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|317480970|ref|ZP_07940050.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
 gi|156859247|gb|EDO52678.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270275831|gb|EFA21691.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|316902863|gb|EFV24737.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
          Length = 370

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLGGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  + +   + L   Q  + E+E  Q + LL  +   D  +A LE+  G GG E+
Sbjct: 71  IANETDQEMREMAREELDACQTRQPELEE-QIKLLLVPADPQDGRNAILEIRGGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++ E + ++ E    ++G   G K     + G N YG LK E GVHR+
Sbjct: 130 AIFAGDLFRMYTKYCESKGWRMEISSANEGAAGGFKEIVCSVTGDNVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG+V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|325911742|ref|ZP_08174149.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
 gi|325476508|gb|EGC79667.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
          Length = 362

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +    ++ EV       +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +   +         G    
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G+L+D + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISALV 346


>gi|312871649|ref|ZP_07731741.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
 gi|311092874|gb|EFQ51226.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
          Length = 362

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +    ++ EV       +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMPE-YEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +   +         G    
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTGDRSE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   V D R  +       +++G+L+D + A +
Sbjct: 307 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISALV 346


>gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614]
 gi|166223579|sp|A1SHH9|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp.
           JS614]
          Length = 357

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 179/344 (52%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  +   P    +   AK L +    L + I   +E+Q    D     EL
Sbjct: 5   VEGMLAEHADLEQRLGAPETHADARLAKQLNQRYAALSSIIGAYRELQQLDDDIEAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D +  +E +    R +   E  +   +    AD  DA LEV +G GG ES  +A 
Sbjct: 65  AQE--DPAFAEEAAALTGRRQEVEERLRRLLVPRDAADDKDAILEVKSGEGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMYTR+AE R +K E L+  + +  G KS T+ +K       G   Y  LK E GVH
Sbjct: 123 DLLRMYTRYAEARGWKVEVLDAAESDLGGYKSVTVAVKAKGTPEPGEAPYALLKFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + ++++I E+D RID +R+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESQGRVHTSAAGVLVLPEA-EQVDVQIDENDLRIDVFRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+VV CQ E+SQ +N+ QA  +LR++L     +K +  A     S+   + 
Sbjct: 242 AVRITHLPTGIVVSCQNEKSQLQNREQAMRILRSRLLAAAQEKADAEAGEARRSQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VLDGDL   + + +
Sbjct: 302 RSERIRTYNF-PENRISDHRTGYKAYNLDQVLDGDLQPVLDSCV 344


>gi|312865182|ref|ZP_07725410.1| peptide chain release factor 1 [Streptococcus downei F0415]
 gi|311099293|gb|EFQ57509.1| peptide chain release factor 1 [Streptococcus downei F0415]
          Length = 359

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE       ++  +E +  L       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMQLSREEASSRETVTVYREYKQILQAISDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L+  K+  E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDPELEEMAKEELKDSKIAKEDYEEKMKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVLYDQ 350


>gi|88807914|ref|ZP_01123425.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
 gi|88787953|gb|EAR19109.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
          Length = 365

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  ++    +Q    +     EL
Sbjct: 10  LEAARDSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYTSLQSVQAEREQAREL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +       L+ +       ++      L     D     LE+ AGAGG E+
Sbjct: 70  LRDSRGDEEMANLAQLELEELDKRHEVLIQRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R++ +R +  + +   + +  G K   L +KG + +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGDSVFSELKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKLYE +L   E  A    + + ++G G 
Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQL--AEANARESSARRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R      S   VL G ++D + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLG-RNFSLDPVLQGQMEDVIGACIAEEQ 352


>gi|322373126|ref|ZP_08047662.1| peptide chain release factor 1 [Streptococcus sp. C150]
 gi|321278168|gb|EFX55237.1| peptide chain release factor 1 [Streptococcus sp. C150]
          Length = 359

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + ++ EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVDYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|209527112|ref|ZP_03275626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209492452|gb|EDZ92793.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 371

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 179/355 (50%), Gaps = 17/355 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q    L  +  DP +  +  E + + + R  L++ ++  ++ +    +   
Sbjct: 6   LLDKLKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQDWKTTQTELAG 65

Query: 72  LLELALE-------EDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHA 123
             ++  E       ++   +     + L     E+E +    LL     D  +  LE+ A
Sbjct: 66  AKQILRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRA 125

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  WA  L+RMY+R+AE + ++   L     +  G K A L I+G   Y  LK 
Sbjct: 126 GTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGARVYSQLKF 185

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   ++  R HTS +++ + P V D +E++I   D  + T R+ GAGGQ+V
Sbjct: 186 EAGVHRVQRVPVTEAGGRVHTSTATVAIMPEV-DDVEVQIDPKDIEMTTARSGGAGGQNV 244

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++AV + H PTG+ V C +ERSQ KN+ +A  +LRAKLYE +L  RE+   +    +
Sbjct: 245 NKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--REQQDAVTSMRR 302

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++G G    +IR+Y  +    V D R      S + VL+G + D ++A +   +
Sbjct: 303 SQVGTGSRSEKIRTYNYKD-NRVTDHRLG-HNFSLAPVLEGGIGDLIQACIIQDQ 355


>gi|212550868|ref|YP_002309185.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549106|dbj|BAG83774.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 328

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 120/324 (37%), Positives = 193/324 (59%), Gaps = 11/324 (3%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +   AK  ++    + + +     +Q  + +  +  +   E       +E       + L
Sbjct: 3   DPGYAKKQIKAIGIIKSWVDAYNVVQTAVEELQLAFDFNKEGVVSE--EEVDKVYSDVVL 60

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
            +E  + +++L  E D   A ++++AGAGGTE+QDW  ML RMY+RW E + +K      
Sbjct: 61  LIEQLELKNMLHSEEDHLGAVIKINAGAGGTEAQDWVAMLYRMYSRWCEVKMYKVNITNW 120

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
            +G++AGIK+ TL ++G +A+G+LK E GVHRLVR+SPY++  +R TSF+S+ V P++DD
Sbjct: 121 LEGDDAGIKTVTLQVEGDDAFGYLKSENGVHRLVRVSPYNAQGKRMTSFASVAVVPLIDD 180

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQ 269
           +IEI+I+  D   DT+R+SGAGGQ+VN  ++ VR+ +          + +V++  + RSQ
Sbjct: 181 TIEIDINLGDITWDTFRSSGAGGQNVNKVETGVRLHYNYKDPNSGETSEIVIENTESRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             NK  A  +L++ LY+LEL++R +     E+ K +I WG QIRSYV    + VKD RT 
Sbjct: 241 FGNKDNAIRLLKSHLYKLELKRRRQAFAKIEAHKKKIEWGSQIRSYVFDD-RRVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            + ++   V+DGDLDD +KA L  
Sbjct: 300 WQTSNVQAVMDGDLDDLIKAYLMA 323


>gi|118475342|ref|YP_892837.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223541|sp|A0RRK4|RF1_CAMFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118414568|gb|ABK82988.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 355

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 182/343 (53%), Gaps = 21/343 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELAL 77
            R + LN+   DP +  ++     L +E+++L+   +A      I + + +N  LLE   
Sbjct: 11  DRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLE--- 67

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +   D L+ ++ E+    E  +   L     D  + +LE+ AG GG E+  +
Sbjct: 68  ---DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L   Y R+ E+R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+
Sbjct: 125 VGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQRV 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P V+DS EI+I+ +D +ID  R+SG GGQ VNTTDSAVR+T
Sbjct: 185 PETESQGRVHTSAITVAIMPEVEDS-EIDINPNDLKIDVMRSSGHGGQSVNTTDSAVRVT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           HIPTG+VV  Q  +SQHKNK  A  +L+A+LY+++  +RE      +  K ++G G    
Sbjct: 244 HIPTGLVVVNQDGKSQHKNKDAAIKVLKARLYDMQ--ERERREKESKERKDQVGTGDRSG 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           +IR+Y   P   + D R N+       ++   L D+ +   +A
Sbjct: 302 RIRTYNY-PQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIA 343


>gi|304321558|ref|YP_003855201.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
 gi|303300460|gb|ADM10059.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
          Length = 360

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 170/349 (48%), Gaps = 18/349 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            +    R + +  K         ++    L +E   L         + + +  L D   L
Sbjct: 7   LNALKTRFAEVEAKMAKATEADEIVR---LSKEHAELKPVAEAALLLTDARQGLLDAEGL 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +      D  + +   + +  +  ++E      Q   L   +AD     LEV AG GG 
Sbjct: 64  TK----STDPEMAEMAKEEIASLTGQIERLEADLQLMLLPKDKADQAPVILEVRAGTGGD 119

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+A  R ++ E L   +    G K     + G N +G LK E GVH
Sbjct: 120 EAALFAGDLFRMYQRYAATRGWRVEILSATESGVGGYKEIQANVSGDNVFGRLKFESGVH 179

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   + I+I+I ESD RID +RASG GGQ VNTTDS
Sbjct: 180 RVQRVPETETQGRIHTSAATVAVLPEP-EDIDIDIQESDLRIDVFRASGPGGQSVNTTDS 238

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIG 307
           AVRITHIPTGVVV  Q E+SQHKN+A+A  +LRA+LYE E  +   E A   +       
Sbjct: 239 AVRITHIPTGVVVSQQDEKSQHKNRAKAMKVLRARLYEAERSRVAAERAAERKGQVGSGD 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ +DD + A +   +
Sbjct: 299 RSERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEAVDDLIDALIVEDQ 346


>gi|83942386|ref|ZP_00954847.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
 gi|83846479|gb|EAP84355.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
          Length = 351

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 173/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I   +  L D      +
Sbjct: 7   LAQITQRFQFLEASMSAGS---DGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    + E   Q   L   EAD   A LE+  G GG E+  +A
Sbjct: 64  LKDPEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  G+K     IKG N +  LK E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYAEARGWKVELIEQQFTELGGVKEVVAHIKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 STESGGRIHTSAATVAVLPEA-EDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+A+LY++E Q+ +   +   +++   G    +IR
Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDMERQRVDSERSASRAAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 302 TYNF-PQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTA 339


>gi|225011020|ref|ZP_03701485.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
 gi|225004825|gb|EEG42782.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
          Length = 288

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 133/279 (47%), Positives = 188/279 (67%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +   +       E     Q     +E  +F ++LS E D+  A L++ AGAGGTES DWA
Sbjct: 2   MEFADAGEITEDELKIAYQNTLDVLEDLEFRNMLSEEGDNLSAVLQITAGAGGTESCDWA 61

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMY  W++K  FK + L   +G+ AG+K+ TL I+G  A+GWLKGE GVHRLVRIS
Sbjct: 62  AMLMRMYMMWSQKAGFKIKELNYQEGDVAGVKTVTLGIEGDFAFGWLKGENGVHRLVRIS 121

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN++RHTSF+S++VYP++DDSIEI I+ +D      R+ GAGGQ+VN  ++ V +TH
Sbjct: 122 PFDSNAKRHTSFASVYVYPLIDDSIEIVINPADISWAFARSGGAGGQNVNKVETKVILTH 181

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+++   + RSQ  N+  A  +L+++LYE+EL+KR+E  +  ESSK +I WG QIR+
Sbjct: 182 HPTGIIIHNSETRSQLDNRENAMKLLKSQLYEIELRKRQEARSEIESSKMKIEWGSQIRN 241

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVL PY++VKD+R+  E      VLDG LD F+K  L +
Sbjct: 242 YVLHPYKLVKDVRSGTETGDVDAVLDGHLDPFLKGFLML 280


>gi|83310717|ref|YP_420981.1| protein chain release factor A [Magnetospirillum magneticum AMB-1]
 gi|119361556|sp|Q2W6V3|RF1_MAGMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82945558|dbj|BAE50422.1| Protein chain release factor A [Magnetospirillum magneticum AMB-1]
          Length = 354

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 184/343 (53%), Gaps = 6/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +D  + R   +  +        +    + L +E   LD  ++ ++  +    D +   E+
Sbjct: 7   FDKVLYRHDEVRAQLSSGEGM-DSQTIQRLSKELSELDPVVTAVQAFRKAREDMVQAAEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+     +E + Q   L   EAD  +A +EV AG GG E+  +A
Sbjct: 66  MNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A    ++ E ++++D    G+K A+  I G N +  LK E GVHR+ R+ 
Sbjct: 126 AELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P   + ++I++++SD R D YR+ G+GGQ VNTTDSAVR+TH
Sbjct: 186 ATESQGRIHTSAATVAIMPEA-EEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG+ V CQQE+SQHKNKA A  +LRA+LYE E   ++        S+   G    +IR
Sbjct: 245 IPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +Y   P   V D R N+       V+ GD LD+ ++A +A  +
Sbjct: 305 TYNF-PQGRVTDHRINMTLYKIDAVMSGDALDELVEALVAADQ 346


>gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel]
 gi|75432752|sp|Q5FGZ2|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81557311|sp|Q5HB80|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden]
 gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 359

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 187/351 (53%), Gaps = 16/351 (4%)

Query: 13  LFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            FD   +   ++   L    EDP     V       +E   L   IS I E      D  
Sbjct: 2   SFDSGLEELSEKFYKLKHLLEDPSQLS-VESFVNASKEYSELLPIISVIDEYNAVQKDIK 60

Query: 71  ILLELALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGA 125
            L EL    E D  +     +    ++ ++       +   L   + D+ +A LE+ AG 
Sbjct: 61  DLQELINNQETDTELKNLAKEEFYELQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +   L RMY ++AEK+ +K E +        G K  +L + G N +  LK E 
Sbjct: 121 GGEEAALFVTDLYRMYIKYAEKKNWKIEQINSSSTGIGGHKEVSLCVSGSNVFAKLKFES 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +++ R HTS +++ V P + + ++++I E D RID YR+SG GGQ VNT
Sbjct: 181 GVHRVQRVPETEASGRLHTSAATVAVLPEI-EEVDLKIDEKDLRIDVYRSSGPGGQSVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIP+G+VV  Q E+SQHKNK +A  +LRA+LY+LE  K++  A I +  K++
Sbjct: 240 TDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYDLE--KQKRDAEISQLRKSQ 297

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           IG G    +IR+Y   P   + D R N+      D++ +GDLD+ ++A +A
Sbjct: 298 IGSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGDLDELIEALIA 347


>gi|291276374|ref|YP_003516146.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
 gi|290963568|emb|CBG39400.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
          Length = 352

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 174/340 (51%), Gaps = 10/340 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++R   +     DP +  ++     L +E+  +       K     L     L +L LE
Sbjct: 9   IIKRHDEITALLVDPAITSDIKALTNLSKEQSEIQEITQQTKAYMATLDTIRDLEDLILE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134
             D ++     + L+ ++   +  +   ++LL      D  + YLE+ AG GG E+  + 
Sbjct: 69  --DKALAGMAKEELEVLRERAKNLEESIKTLLIPKDPNDGKNIYLELRAGTGGDEAGIFV 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L R Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 127 GDLFRAYCRYADLKKWKVEIISSSENNVGGYKEIIALIKGEGVYSRLKFESGTHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ ++ SD RI+ +RA G GGQ VNTTDSAVRITH
Sbjct: 187 ATESQGRIHTSAITVALMPEV-DEVEVVLNPSDLRIEVFRAGGHGGQCVNTTDSAVRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           IPTG+ V  Q E+SQHKNK +A  +LR+++Y+ ++++++ + A   ++         +IR
Sbjct: 246 IPTGINVSIQDEKSQHKNKEKALKILRSRIYDAQMEQQQVQNAQTRKNQVGSGDRSERIR 305

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + D R  +   S  +V+  G+LD  +    A
Sbjct: 306 TYNY-PQNRLTDHRIGLTLYSLEEVMLSGNLDPIIDPLTA 344


>gi|15594541|ref|NP_212330.1| peptide chain release factor 1 [Borrelia burgdorferi B31]
 gi|216264551|ref|ZP_03436543.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218249543|ref|YP_002374724.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221217544|ref|ZP_03589014.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223889241|ref|ZP_03623829.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224532854|ref|ZP_03673469.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224534094|ref|ZP_03674677.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225549805|ref|ZP_03770769.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226321514|ref|ZP_03797040.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|3914620|sp|O51214|RF1_BORBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739097|sp|B7J1C9|RF1_BORBZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2688096|gb|AAC66592.1| peptide chain release factor 1 (prfA) [Borrelia burgdorferi B31]
 gi|215981024|gb|EEC21831.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218164731|gb|ACK74792.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221192607|gb|EEE18824.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223885274|gb|EEF56376.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224512243|gb|EEF82629.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224512793|gb|EEF83161.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225369613|gb|EEG99062.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226232703|gb|EEH31456.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|312148526|gb|ADQ31185.1| peptide chain release factor 1 [Borrelia burgdorferi JD1]
          Length = 357

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 127/345 (36%), Positives = 198/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  +  K +D +L ++  +   +++E  +L+   +     ++I  ++ D   +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|163759877|ref|ZP_02166961.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
 gi|162282835|gb|EDQ33122.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
          Length = 361

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 176/342 (51%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P    +      L  E   L   +  I+ +   L +   L  + 
Sbjct: 11  ELERRFGEVEARMAAGP----DPEAYVKLASEYSDLQPLVDQIRALDAALAERSDLEAML 66

Query: 77  LE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +  +D  +       L+  K+ +    E  +   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  QDTANDKEMRDLAESELRSTKVRIGELEEQIEIMLLPKDAADERSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  RK+K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYASSRKWKVEVLSASEGEAGGYKEIIATISGKGVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + I+IE+   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETESGGRIHTSAATVAVLPEA-EDIDIEVRSEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV    E+SQH+N+A+A  +LRA+LY++E Q+ ++  +    S+   G    
Sbjct: 246 ITHLPTGLVVTSS-EKSQHQNRARAMQVLRARLYDMERQRADDERSQSRRSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       ++ G++D+ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALIS 345


>gi|322411678|gb|EFY02586.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 359

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIADAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             + + D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDANGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQ 350


>gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104]
 gi|166223570|sp|A0QCW7|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104]
          Length = 357

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 118/333 (35%), Positives = 172/333 (51%), Gaps = 11/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   +   +++     D     EL
Sbjct: 8   IDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E +D L+    +++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  AA--DDDSFTAEVAD-LESRVAQLDTQLTDMLAPRDSHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR
Sbjct: 125 ADLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  E++I ESD RID +R+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTGVVV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +  
Sbjct: 245 VRITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             +IR+Y   P   + D R   +  +   VLDG
Sbjct: 305 SERIRTYNF-PENRITDHRIGFKAHNLDQVLDG 336


>gi|119511149|ref|ZP_01630266.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
 gi|119464137|gb|EAW45057.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
          Length = 365

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/350 (29%), Positives = 179/350 (51%), Gaps = 10/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q    L  +  DP    N  E + + + R  L+  ++  +  +    +   
Sbjct: 6   LLDKLKSVEQTFHELTRRLADPDTASNPDEYQKIAKSRSSLEEVVNTYETWKIATEELAG 65

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAG 126
             ++  E + D  + +  +  +  ++ ++E      +   L     D  +  LE+ AG G
Sbjct: 66  ARQVLKEANGDPELHEMAALEVNELEEKLEHLEARLKVLLLPRDPNDEKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  LLRMY+R+AE + +K + +    GE  G K   L I+G + Y  LK E G
Sbjct: 126 GDEASIWAGDLLRMYSRYAELQHWKVKLVSESLGEMGGFKEVILEIQGDSVYSQLKFEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ + P V D +EI I   D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPATEAGGRVHTSTATVAIMPEV-DDVEIHIDPKDIEMSTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++A  + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L ++++       S+   
Sbjct: 245 ETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLAEQQDAVTSMRRSQVGT 304

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y  +    V D R   +  S + VL+G+L+  +++ ++  +
Sbjct: 305 GSRSEKIRTYNYKD-NRVTDHRLG-QNYSLNPVLEGELETVIQSCISQDQ 352


>gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [Dietzia cinnamea P4]
 gi|319437888|gb|EFV92872.1| peptide chain release factor 1 [Dietzia cinnamea P4]
          Length = 361

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 177/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L ++   A+ + +    L   +   + +     D     EL
Sbjct: 12  IDDVLSEYGGLEAQLSDPTLHEDAAAARRVGKRFAELTPIVQCHRALVSTRDDAAAAREL 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S  +E  D L     E+E +  + L      D++D  +E+ +G GG ES  +A
Sbjct: 72  AG--DDPSFAEEA-DRLDAEAAELEARLADLLAPRDPHDADDVVMEIKSGEGGEESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMYTR+AEK  +  E L + + +  G K A+  I+         +  LK E GVHR
Sbjct: 129 ADLARMYTRYAEKHGWIVEVLGVTESDLGGYKDASFSIRSRQPSRDGVWSRLKFEGGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V+P  +D   +EI ESD RID YR+SG GGQ VNTTDSA
Sbjct: 189 VQRVPVTESQGRVHTSAAGVLVFPEPEDVGPVEIDESDLRIDVYRSSGKGGQGVNTTDSA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG VV CQ ERSQ +NK +A  +L A+L     +     A  G +S+   +  
Sbjct: 249 VRITHLPTGTVVTCQNERSQLQNKQRALQVLAARLQAAAEEAAGAEAAEGRASQVRTVDR 308

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDGDLD  + A  A ++
Sbjct: 309 SERIRTYNY-PENRIADHRVGFKAHNLDAVLDGDLDAVLDALAAEER 354


>gi|308190290|ref|YP_003923221.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
 gi|307625032|gb|ADN69337.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
          Length = 371

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72
             +       L  K +D  +  N+ E   + +E   + +      +   +Q+   D  ++
Sbjct: 22  LSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 81

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +    EE+         +N  ++    E  +   L   E D  +  +E+   AGG E+  
Sbjct: 82  INSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGDEANI 141

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVHR+ R
Sbjct: 142 FAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHRVQR 201

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDSAVRI
Sbjct: 202 VPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSAVRI 261

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++                +I
Sbjct: 262 THLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRSEKI 321

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R     +    V++G L   ++A L  ++
Sbjct: 322 RTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 362


>gi|225874213|ref|YP_002755672.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
 gi|254790854|sp|C1F2J1|RF1_ACIC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225791643|gb|ACO31733.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
          Length = 358

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 176/341 (51%), Gaps = 6/341 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            +    R   L  +  DP L  +  + +   ++ + L++ +   +E    Q+ + D   +
Sbjct: 5   LEQIETRYEELGREMADPALIADQQKYQKTAKQHRELEDVVEKFREYREVQNGIADARGM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +  A  E      +E +   +R+       +   L     D  +  +E+ AG GG E+  
Sbjct: 65  MNEADAEIRAMAEEELASLEERLPQIEADLKLLLLPKDPNDEKNVVVEIRAGTGGDEASL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  + RMY R+AE+R++K E L + +    G K    +I+G + Y  +K E GVHR+ R
Sbjct: 125 FAAEVFRMYARYAEQRRWKVEVLSMSESSVGGAKEVIAIIEGDHVYSQMKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P   + ++++I   D RIDT+ +SG GGQ VNTT SAVRI
Sbjct: 185 VPATETQGRVHTSAITVAVLPEA-EEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQ 311
           TH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+E++++++  A   +          +
Sbjct: 244 THLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERQQQALAKERKQQVGSGDRSEK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R  +     ++V++G L   + A  A
Sbjct: 304 IRTYNF-PQNRLTDHRIGLTIHQLAEVMEGRLQPVIDALTA 343


>gi|238810252|dbj|BAH70042.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 373

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72
             +       L  K +D  +  N+ E   + +E   + +      +   +Q+   D  ++
Sbjct: 24  LSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 83

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +    EE+         +N  ++    E  +   L   E D  +  +E+   AGG E+  
Sbjct: 84  INSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGDEANI 143

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVHR+ R
Sbjct: 144 FAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHRVQR 203

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDSAVRI
Sbjct: 204 VPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSAVRI 263

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++                +I
Sbjct: 264 THLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRSEKI 323

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R     +    V++G L   ++A L  ++
Sbjct: 324 RTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 364


>gi|319901262|ref|YP_004160990.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
 gi|319416293|gb|ADV43404.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
          Length = 370

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  +     + L   Q  + E+E  Q + LL  +   DS +A LE+  G GG E+
Sbjct: 71  ITNEADPEMRDMAREELDLCQARQPELEE-QIKLLLVPTDPQDSRNAILEIRGGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+++ + + +K E    ++G   G K     + G   YG +K E GVHR+
Sbjct: 130 AIFAGDLFRMYSKFCDIKGWKLEVSSANEGAAGGFKEIICSVTGDGVYGTMKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|156742398|ref|YP_001432527.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
 gi|156233726|gb|ABU58509.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
          Length = 364

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 171/349 (48%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L      P +  + +  +   RE++ L+  +   +  +D          L
Sbjct: 9   LASITARYDELLDLMAQPDVATDPVRLQRYAREQRELEPLVEAYRAYRDVERQIEDTSFL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + Q   D L  +       + +     L     DS +A +E+  G GG E+ 
Sbjct: 69  LEHETDQDVRQLAQDELDHLLERRAQLEQQIKVLLLPRDPNDSKNAIMELRQGEGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE+R +  E +   +    G K     ++G  AY  LK E GVHR+ 
Sbjct: 129 LFAADLFRMYTRYAEQRGWDIEVISATENGPGGYKEIIFEVRGEGAYSRLKYEGGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P V+++ +IE++ SD R+D +R+ G GGQ VNTTDSAVR
Sbjct: 189 RVPATEARGRIHTSTATVAVLPEVEET-DIELNPSDYRVDVFRSGGHGGQGVNTTDSAVR 247

Query: 252 ITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           I +    P  +VV CQ  RSQ KNKA A  +LRA+LY  E +KR     +GE+   ++G 
Sbjct: 248 IVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRR--KELGETRLAQVGA 305

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G    +IR+Y   P   V D R     ++   +LDGDLD  +   +   
Sbjct: 306 GERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGILDGDLDRLIDMLIIAD 353


>gi|91201018|emb|CAJ74075.1| strongly similar to class I peptide chain release factor
           [Candidatus Kuenenia stuttgartiensis]
          Length = 360

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 4/337 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R + L     DP +  +      LM+E   L   +    ++            L
Sbjct: 10  LEDMQKRYNELENLLADPQVIADSGRYMSLMKEHGCLSKIVHKYAQLTKTYIRKQDAENL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134
             + +   + +   D L+  +  +  +  E  ++ +  +N +   E+ AG GG E+  +A
Sbjct: 70  LSDGEFADMARMELDELEGHEKAIMDEIKELFIAEDKTANKNVIAEIRAGTGGEEAAIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++AE + +KTE  + ++ +  G K  T  I+G N Y  L+ E G HR+ R+ 
Sbjct: 130 ADLFRMYIKYAESQNWKTELFDYNETDLGGFKEVTFSIEGRNVYQKLRFESGTHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +++ R HTS +++ + P V + +EI+I+ +D  I+T+RASG GGQ VN T SAVRITH
Sbjct: 190 QTEASGRVHTSTATVAILPEV-EEVEIDINPADILIETFRASGPGGQKVNKTSSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           I TG+VV+C  E+SQHKNKA+A  +LR++L+E +E + + E   +            +IR
Sbjct: 249 ISTGIVVKCLDEKSQHKNKAKAMRILRSRLHESIEEKNQLERDQVRRIQIGTGDRSEKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y       V D R N    +   V+ G LD+ + A 
Sbjct: 309 TYNYS-QNRVTDHRINFSVYNLEHVMLGYLDEIIAAL 344


>gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 358

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP    +    +   +    L   ++   +++    D     EL
Sbjct: 8   VDDILAEYQGLEAQMADPEFANDPDNVRKAGKRYSQLQPIVNLNTQLEQARADLADAKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+   S      + L+   +E+E K  + L      D +D  +E+ AGAGG E+  +A
Sbjct: 68  AYED---SAFTAEVERLEPKVVELEEKLADMLAPRDPHDPDDMVMEIKAGAGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L+RMY R+AEK  F TE L+  + +  G+K  TL I+        A+   K E GVHR
Sbjct: 125 GELVRMYQRYAEKHGFITEVLDESESDLGGVKDMTLSIRSKNPSQDGAWSVFKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +SN R  TS + + VYP  D+  ++EI E D R+D YR+SG GGQ VNTTDSA
Sbjct: 185 VQRIPVTESNGRIQTSAAGVLVYPEPDEVGQVEIDEKDIRVDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIGW 308
           VR+TH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E +K E  A  G  +    +  
Sbjct: 245 VRLTHLPTGIIVTCQKERSQIQNKARAMQVLQARLQQIEEEKAEAEAAEGRHAQVRTMDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDGD+D  + A     +
Sbjct: 305 SERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMDALLMALQDADR 350


>gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
 gi|119361539|sp|Q2GGM5|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 359

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 189/351 (53%), Gaps = 16/351 (4%)

Query: 13  LFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            FD   +   Q+   L +  EDP     V       +E   L   IS I +      D  
Sbjct: 2   SFDNSLEELSQKFYKLKSMLEDPSQLS-VDSFVAASKEYSELLPVISVIDQYNILQKDIA 60

Query: 71  ILLELALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGA 125
            L EL    E D  +     +     + ++       +   L   + D+ +A LE+ AG 
Sbjct: 61  GLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +   L RMYT++AE++ +K E +        G K  +L I G N +  LK E 
Sbjct: 121 GGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCISGSNVFARLKFES 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +++ R HTS +++ V P + + ++++I E D RID YR+SG GGQ VNT
Sbjct: 181 GVHRVQRVPETEASGRLHTSAATVAVLPEI-EEVDLKIDEKDLRIDVYRSSGPGGQSVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIP+G+VV  Q E+SQHKNK++A  +LRA+LY LE  K++  A I +  K++
Sbjct: 240 TDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLE--KQKRDAEISQMRKSQ 297

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           IG G    +IR+Y   P   + D R N+      D++ +G+LD+F++A +A
Sbjct: 298 IGSGDRSERIRTYNF-PQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIA 347


>gi|328944392|ref|ZP_08241854.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
 gi|327490976|gb|EGF22753.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
          Length = 354

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 116/331 (35%), Positives = 168/331 (50%), Gaps = 7/331 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +  E   + +E     + ++  +E    L D     E+
Sbjct: 5   LEKLIAAYAELEKKMIDPAIVADPKEYARIAKEHARQGDLVARAREYLQALDDIEAAKEM 64

Query: 76  A--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQD 132
               + D+  +LQE     +     +E +    L+ G   D  D  +E+ AG GG E+  
Sbjct: 65  LHDADADEREMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVEIRAGVGGDEAAI 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MY R+AE + +K E L     E  G K+    + G   Y  +K E GVHR+ R
Sbjct: 125 FAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSVMKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R  TS +++ V P   D I+I+I  +D RIDTY ASG GGQ VNTT SAVRI
Sbjct: 185 VPKTESQGRIQTSTATVAVLPEA-DEIDIQIDPTDLRIDTYCASGPGGQCVNTTYSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL+K++E       S+   G    +
Sbjct: 244 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQGAARLSQIGHGNRSEK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           IR+Y  QP   V D R     T  + VL GD
Sbjct: 304 IRTYN-QPQDRVTDHRIGFNATY-NGVLLGD 332


>gi|154246564|ref|YP_001417522.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
 gi|226739122|sp|A7IIM2|RF1_XANP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154160649|gb|ABS67865.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
          Length = 360

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 171/344 (49%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R + +              E   L RE   L   +  ++ ++D   D     EL
Sbjct: 9   LDQLVARHAEIEAALSRG---AEGEEYVRLGREFSDLSPVVEQVRALKDAERDLEGANEL 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     ++R++  +E      +   L     D     LEV AG GG E+
Sbjct: 66  LAESAADPEMREMAEAEVERLQDRIEALATAVRLALLPKDAMDERGIILEVRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYTR+A ++ +  E L   +G   G K     + G  AY  LK E GVHR+
Sbjct: 126 ALFAGDLYRMYTRYAAEKGWSVEILSESEGTMGGYKEIVAALHGRGAYARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++++I+E+D RID YRA GAGGQHVN T+SAV
Sbjct: 186 QRVPATETSGRIHTSAATVAVLPEA-EDVDVDINEADLRIDVYRAQGAGGQHVNKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWG 309
           RITH+PT  VV  Q ERSQH+NKA+A  +LRA+L + E QK+E   A   +         
Sbjct: 245 RITHLPTNTVVAVQDERSQHRNKARAMALLRARLLDDERQKKEAGRAAERKGQVGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ G  LD+ +   L 
Sbjct: 305 ERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGTALDEIIDPLLT 347


>gi|322391878|ref|ZP_08065343.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
 gi|321145358|gb|EFX40754.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
          Length = 359

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQTVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|126697059|ref|YP_001091945.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9301]
 gi|166223586|sp|A3PF19|RF1_PROM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126544102|gb|ABO18344.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9301]
          Length = 364

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 171/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  +  DP +  +  + + + RER  L+  +    ++ D   +      L
Sbjct: 10  LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIEDSKNL 69

Query: 76  ALE-EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +D  +    ++ L  ++      ++      L     D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L  +E  A       +++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352


>gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973056|gb|EED91387.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 343

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 127/343 (37%), Positives = 195/343 (56%), Gaps = 20/343 (5%)

Query: 19  AVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRE---RQHLDNAISFIKEIQDRLCDNLILL 73
              RL  L T+T  P  W   N   ++++ RE      L   +   + ++      L LL
Sbjct: 1   IQSRLQDLETETSSPSFWDASNSDRSEVVTREIGRYTRLKGEMEGWERLRGDALGALELL 60

Query: 74  ELAL---------EEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +  L         EED+  +     +E   + Q++  + +  + ++LLSG  DS    L+
Sbjct: 61  QDLLDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGPYDSAQCTLQ 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTE+ DW +ML RMY R A+   +K   LE   G+  G KS  LL++G NAYGW
Sbjct: 121 LTAGAGGTEACDWVSMLYRMYMRHAQFMDYKVTVLEESVGDVVGYKSVELLVEGVNAYGW 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD--SIEIEISESDCRIDTYRASGA 238
            KGE+G HRLVR+SP+++N++R T+F+ + V P++++    EI+I E +  I T R+ G 
Sbjct: 181 FKGEKGAHRLVRLSPFNANNKRQTTFAGVDVIPLLEEGTVSEIDIPEKELEITTMRSGGK 240

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++ VR+ HIP+G+ ++C QERSQ +NK  A   L+ +L  +  +++ +  N 
Sbjct: 241 GGQNVNKVETGVRVKHIPSGIAIKCTQERSQSQNKQIALTRLKGQLLVIAQEQQLQSINA 300

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                 E  WG QIR+YV+QPY+MVKD R+  E +    VLDG
Sbjct: 301 IRGDIVEASWGAQIRNYVMQPYKMVKDARSGWETSDVEGVLDG 343


>gi|225548553|ref|ZP_03769601.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
 gi|225370816|gb|EEH00251.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
          Length = 357

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 127/345 (36%), Positives = 197/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  +  K +D +L ++  +   +++E   L+   +     ++I  ++ D   +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTCLEKINTKKIEYEKILSQINDTKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|163867491|ref|YP_001608690.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
 gi|189039959|sp|A9IMM3|RF1_BART1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161017137|emb|CAK00695.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
          Length = 358

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                +R   + ++   +P    N      L  E   L   I+ I+ +     +   L  
Sbjct: 9   IKQLEKRFEIIESQMTTNP----NAETYVKLASEYAELQPVIASIRALNALYGEITELET 64

Query: 75  LALEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTE 129
           +  ++  D  +     + L  +  +VE  + E     L    AD   A +E+ AG GG+E
Sbjct: 65  IINDKQTDIEMRHLAQEELPSLHKKVEQLEKELQILLLPKDVADEKSAIVEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  ++  L RMY R+A    +K E + + +GE  G K     I G   +  LK E GVHR
Sbjct: 125 AALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   ++  R HTS +++ V P   + I+I+I   D RIDT RASGAGGQHVNTTDSA
Sbjct: 185 VQRIPETETGGRIHTSAATVAVLPEA-EEIDIDIRPEDIRIDTMRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           VRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E   +    S+   G  
Sbjct: 244 VRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKVESERSASRKSQVGSGDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +L+GDLD+ + A ++
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDEIIHALIS 345


>gi|153807530|ref|ZP_01960198.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
 gi|149129892|gb|EDM21104.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
          Length = 370

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 169/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLGNIEEARNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +    E  +   + +   DS +A LE+  G GG E+ 
Sbjct: 71  LANESDADMREMAKEEMDSSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKYCETKGWKMEVSSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLTAFMDGDIQDCIDHLIVAE 360


>gi|163787722|ref|ZP_02182169.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
 gi|159877610|gb|EDP71667.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
          Length = 358

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 7/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   +N     P +  +      LM+E +     +      ++ L +     E+  +
Sbjct: 8   IKQRFDEVNDLIIQPDIISDQKRYAKLMKEYKDFKLIVDKGAVYKEALDNVAEAEEIITD 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +++     L   K  +E  +    F  +     D+ +  +EV AG GG E+  +A
Sbjct: 68  GSDDEMVEMAKMQLDEAKDTIEKLEEEIRFMLIPKDPDDAKNVVVEVRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++   + ++ + +   DG   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYSKYCSDKGWRVDVVSQSDGTSGGFKEVIFEVSGEDVYGTLKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   +  + E+  ++ RI+   ++G GGQ VNTT SA+++ H
Sbjct: 188 QTETQGRVHTSAATVMVLPEA-EEFDYELDMTEVRIERTTSTGPGGQSVNTTYSAIKLHH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            PTG++V CQ ++S HKN  +A  +LR++LYE EL KR+   +    S    G    +IR
Sbjct: 247 EPTGMIVSCQDQKSSHKNLEKALKVLRSRLYERELAKRQAADSEKRKSMVSSGDRSAKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R  +     +++++GD+   +   +  +
Sbjct: 307 TYNY-PQGRVTDHRIGLTLYDLTNIINGDIQKIIDELMLAE 346


>gi|146318502|ref|YP_001198214.1| peptide chain release factor 1 [Streptococcus suis 05ZYH33]
 gi|146320693|ref|YP_001200404.1| peptide chain release factor 1 [Streptococcus suis 98HAH33]
 gi|145689308|gb|ABP89814.1| Protein chain release factor A [Streptococcus suis 05ZYH33]
 gi|145691499|gb|ABP92004.1| Protein chain release factor A [Streptococcus suis 98HAH33]
 gi|292558283|gb|ADE31284.1| Peptide chain release factor 1 [Streptococcus suis GZ1]
          Length = 364

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 8/355 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           LN +           R   L     DP +  +      L +E     + ++  +E +  L
Sbjct: 3   LNLMNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVL 62

Query: 67  CDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121
            + +   E+  E   D  + +   + L++ K + E  +       L     D  +  LE+
Sbjct: 63  QNIVDAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEI 122

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
              AGG E+  +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  L
Sbjct: 123 RGAAGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKL 182

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G HR+ R+   +S  R HTS +++ + P V + +E +I   D R+D Y ASGAGGQ
Sbjct: 183 KYESGAHRVQRVPVTESQGRVHTSTATVLIMPEV-EEVEYDIDPKDLRVDIYHASGAGGQ 241

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300
           +VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +
Sbjct: 242 NVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERK 301

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           S+        +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 302 STIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 355


>gi|121602027|ref|YP_988678.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
 gi|166223530|sp|A1URS5|RF1_BARBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120614204|gb|ABM44805.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
          Length = 359

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 179/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++    P    N      L  E   L   ++ I+ +     +   L  +A
Sbjct: 11  QIEKRFEIIESQMAQNP----NAETYVKLASEYAELQQIVTPIRTLNALYKEVTELEAMA 66

Query: 77  LE-EDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  +     + L  ++ ++E  + E     L    AD   A +E+ AG GG+E+ 
Sbjct: 67  NTTQIDADMYALAQEELVLLRQKIEQLEQEIQILLLPKDIADEKSAIIEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A   K+K E + + D E  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETETSGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LR++L+++E QK E   +    ++   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRSRLFDIERQKAESERSASRKTQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDLD+ +   ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLDELINPLIS 345


>gi|163735803|ref|ZP_02143232.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
 gi|161390889|gb|EDQ15229.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
          Length = 351

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 175/340 (51%), Gaps = 14/340 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R  +L           ++     L +E   L   +  I   Q  L D     E+  
Sbjct: 9   QITERFQYLEAAMSTGDGGGDIA---TLAKEYSDLRPVVEQISAYQQLLNDLEDAAEML- 64

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  +     + + R+K  +       Q   L   +AD+  A LE+  G GG E+  +
Sbjct: 65  --GDPDMAPLAEEEIPRLKSALPQAEAALQLALLPKDKADAKPAMLEIRPGTGGDEAALF 122

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+AE + +K + +E+ + E  GIK     IKG + +  LK E GVHR+ R+
Sbjct: 123 AGDLFRMYQRYAETQGWKVDVIELQETELGGIKEVVAHIKGADVFARLKYESGVHRVQRV 182

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRIT
Sbjct: 183 PSTESGGRIHTSAATVAVLPEA-EDVDIHIEANDLRIDTMRSSGAGGQHVNTTDSAVRIT 241

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTG+VV    E+SQH+N+  A  +L+A+LY+LE  + ++  +   +++   G    +I
Sbjct: 242 HLPTGLVVTSS-EKSQHRNREIAMQVLKARLYDLERSRVDDERSADRAAQVGSGDRSERI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   + D R N+       +L GDLD+ + A  A
Sbjct: 301 RTYNF-PQGRMTDHRINLTLYRLDAILQGDLDEIIDALTA 339


>gi|326335566|ref|ZP_08201753.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692332|gb|EGD34284.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 366

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 9/359 (2%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M L + +  +    D     QR   ++     P++  +      L +E + L   +   +
Sbjct: 1   MHLDKIIWDMLARLDI--VKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKRE 58

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSND 116
           E      +     E+  +  D  +++     L+  K  +    E  +F  +     DS +
Sbjct: 59  EYIVITGNIAEAEEIIKDGSDAEMVEMAHLQLEEAKERLPQLEEEIKFLLIPKDPEDSKN 118

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A +E+ AG GG E+  +A  L RMY+++ + + +    +++++G   G K   L I G +
Sbjct: 119 AVMEIRAGTGGDEASIFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEINGED 178

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG LK E GVHR+ R+   ++  R HTS +++ V P   +  ++E++  D +I    ++
Sbjct: 179 VYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVIVLPEA-EEFDVELNMEDVKIIRTTST 237

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTT SA+++ HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E  
Sbjct: 238 GPGGQSVNTTYSAIQLQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKMEAD 297

Query: 297 NIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    S    G    +IR+Y   P   V D R  +      ++++GD+   +      +
Sbjct: 298 SARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLGNIINGDIQRLIDELQLAE 355


>gi|257056964|ref|YP_003134796.1| peptide chain release factor 1 [Saccharomonospora viridis DSM
           43017]
 gi|256586836|gb|ACU97969.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharomonospora
           viridis DSM 43017]
          Length = 358

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 178/355 (50%), Gaps = 18/355 (5%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L GL D        + L  +  DP +  +   A+ L R    L   +  + E++    
Sbjct: 4   ESLRGLLD------EYAELEKQLADPAVHADQARARKLGRRYSELSPVVKTVGELETTRS 57

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAG 126
           +     ELA E+   S   E  D L +    +E K  E LL     D +D  +E+ +G G
Sbjct: 58  ELEAAKELAAED---SSFAEEVDRLGKRVSALETKLAELLLPRDPYDGSDVVMEIKSGEG 114

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWL 181
           G ES  +A  LLRMY R+AE++ +  E L+    +  G K  T+ +K         +  L
Sbjct: 115 GEESALFAGDLLRMYLRFAERQGWTAEILDATPSDLGGYKDVTVSVKSKGTEAEGVWACL 174

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + +YP  ++        +D RID +R+SG GGQ
Sbjct: 175 KFEGGVHRVQRVPATESQGRIHTSAAGVLIYPEPEEIEVEI-DPNDLRIDVFRSSGPGGQ 233

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQ +N+A+A  +L+A+L  L  ++    A     
Sbjct: 234 SVNTTDSAVRVTHLPTGIVVSCQNEKSQIQNRARAIQVLQARLQALAEEEAAAKAADARR 293

Query: 302 SK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           S+   +    ++R+Y   P   + D R N +  +   VLDG+L   ++A  A  +
Sbjct: 294 SQVRTVDRSERVRTYNF-PENRISDHRVNYKAYNLDQVLDGELSGVLEALRAADR 347


>gi|319787948|ref|YP_004147423.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466460|gb|ADV28192.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
          Length = 360

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/324 (33%), Positives = 169/324 (52%), Gaps = 14/324 (4%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +    + L RE   L+   + +        D      +    DD  + +   + 
Sbjct: 25  DPGVMGDPARFRDLSREFSQLEPVATALAAEARAREDLATAEAM---RDDPELAELAQEE 81

Query: 92  LQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           +   +  +E    E  L        D  + +LEV AG GG E+  +A  L RMY R+AE+
Sbjct: 82  IAAARGRLEQLDHELALLLVPKDPRDEGNLFLEVRAGTGGDEAALFAGDLFRMYARYAER 141

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + +K E    + GE  G K     I G  AY  LK E G HR+ R+   +S  R HTS +
Sbjct: 142 QGWKVEVESDNPGEHGGHKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAA 201

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ + P  D+  EI I+ +D ++DT+R+SGAGGQHVN TDSA+RITH+P+G+VV+ Q ER
Sbjct: 202 TVAIIPEADEIEEITINPADLKVDTFRSSGAGGQHVNKTDSAIRITHLPSGLVVESQTER 261

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVK 324
           SQH N+ +A   L+A+L + E  K++  A   ES + ++G G    +IR+Y   P   + 
Sbjct: 262 SQHANRDKAMKRLKAQLLDAERSKQQ--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRIT 318

Query: 325 DLRT-NIEKTSPSDVLDGDLDDFM 347
           D R   +      ++L+GDLD  +
Sbjct: 319 DHRVEGLTLYDLPNILEGDLDPLV 342


>gi|84516322|ref|ZP_01003682.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
 gi|84510018|gb|EAQ06475.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
          Length = 351

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 174/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R  FL  K  D     ++     L RE   L   +  +   +D L   +    L
Sbjct: 7   IEQIIDRFRFLEAKMSDAAHGGDIA---ALGREYAELRPVVDTVTAYKDLLAQMIDTQAL 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ ++    L+      E+  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LKDPEMRALAEDELPELKAALAASEHAVQLALLPKDAADARPALLEIRPGTGGDEASLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE   ++ E LE    E  GIK     + G   +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAENMGWRFEILEQSQTELGGIKEVVARVAGEGVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRI H
Sbjct: 184 ETESGGRIHTSAATVAVLPEAQD-VDIQINPNDLRIDTMRASGSGGQHVNTTDSAVRILH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           IPTG++V    E+SQH+N+  A  +L+ +L++LE Q+ + E +   ++         +IR
Sbjct: 243 IPTGLIV-VSAEKSQHRNREIAMQVLKTRLFDLERQRIDGERSADRKAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+   S   V+ GDLD  + A  +
Sbjct: 302 TYNF-PQGRLTDHRINLTLYSLGQVMAGDLDTIIDALQS 339


>gi|260171648|ref|ZP_05758060.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|299148543|ref|ZP_07041605.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|315919960|ref|ZP_07916200.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|298513304|gb|EFI37191.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|313693835|gb|EFS30670.1| peptide chain release factor 1 [Bacteroides sp. D2]
          Length = 370

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 170/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +    E  +   + +   DS +A LE+  GAGG E+ 
Sbjct: 71  LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +        I   ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|296111565|ref|YP_003621947.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
 gi|295833097|gb|ADG40978.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
          Length = 357

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 94/345 (27%), Positives = 169/345 (48%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L++E   + + ++     +  + +     ++
Sbjct: 8   LQTVVDRYDELNEQLADPEVAGDGQKYMALLKEAGEMRDTVAAYTRYKQVIQEIQDAEDM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     ++L  ++ E    +       L     D  +  +E+   AGG ES 
Sbjct: 68  L---DDDELAPLAKEDLNTLRPEKSDLEAQLKILMLPKDPNDDKNIIMEIRGAAGGDESS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAADLLDMYRRYAEKQRWALSIIDETTTEVGGYKEVAIMISGDNVYSKLKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR
Sbjct: 185 RVPSTETQGRVHTSTATVGVMPEF-EEIDFELAESDLEEEFFRSGGAGGQNVNKVSTAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           + H PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E   A   +S+        
Sbjct: 244 LVHKPTGMMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +++GDL + + A +   +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGDLGEIIDAFVIADQ 347


>gi|323136601|ref|ZP_08071682.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
 gi|322397918|gb|EFY00439.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
          Length = 356

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 172/341 (50%), Gaps = 11/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   +  K        +      L RER  LD+ +  I+  +D   +   L  +
Sbjct: 7   LDLILRRYDEIGEKLAGG---ADGQTFVALSRERATLDDVVDAIRAWRDAQREVDDLAAM 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +           + ++E      +   L   EAD     LEV AG GG E+
Sbjct: 64  LADSSLDPEMRALAESETDGAREKLEAAANTLRLALLPKDEADEKGVILEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L R Y ++A  + ++ E +    G   G K     I G   YG LK E GVHR+
Sbjct: 124 ALFAGDLFRAYQKYAALKGWRVELVSESPGALGGFKEIVAEIIGRGVYGRLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I+I E D +IDT RA GAGGQHVN T+SA+
Sbjct: 184 QRVPETETQGRIHTSAATVAVLPQA-EDVDIDIDEKDLQIDTMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITHIP+G+VV  Q+ERSQH+NKA+A N+LR++LY+ E Q+  +E ++  +         
Sbjct: 243 RITHIPSGIVVMMQEERSQHRNKAKAMNVLRSRLYDAERQRLDKERSDDRKQQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R N+       V++G+ D+ + A 
Sbjct: 303 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGEFDEIIDAL 342


>gi|300933612|ref|ZP_07148868.1| peptide chain release factor 1 [Corynebacterium resistens DSM
           45100]
          Length = 353

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 183/342 (53%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   ++++    D+    E+
Sbjct: 2   VDDILAEYQGLEAQLGDPELHNDPAAARKVGKRFSELQPIIQTHQQLEQAREDHEAAAEM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E  D    +E    L+    E+E K  + L      D +D  +E+ +GAGG E+  +A
Sbjct: 62  ASE--DAEFAEEAKR-LETEIAELEEKLTDLLAPRDPHDGDDIVMEIKSGAGGEEAALFA 118

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+AE+  F TE L++++ +  G+K  T+ I+        A+   K E GVHR
Sbjct: 119 GELARMYQRYAERHGFATEVLDLNETDLGGVKDMTMSIRSKQPSRDGAWAEFKFEGGVHR 178

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +S  R  TS + + VYP  D+  +++I E D RID YR+SG GGQ VNTTDSA
Sbjct: 179 VQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDEKDLRIDVYRSSGKGGQGVNTTDSA 238

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTGVVV CQ+ERSQ +NKA+A  +L A+L ++E +K E  A  G +++   +  
Sbjct: 239 VRITHLPTGVVVTCQKERSQIQNKARAMQVLAARLQQMEEEKAEAEAAEGRAAQIRTMDR 298

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R   +  +   VL GDL+    A 
Sbjct: 299 SERIRTYNF-PESRVSDHRIGYKANNLDAVLGGDLESLFAAL 339


>gi|50914205|ref|YP_060177.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10394]
 gi|61214586|sp|Q5XC69|RF1_STRP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50903279|gb|AAT86994.1| Bacterial Peptide Chain Release Factor 1 [Streptococcus pyogenes
           MGAS10394]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +++ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMNEVIDALVMYDQ 350


>gi|296876522|ref|ZP_06900573.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
 gi|296432515|gb|EFH18311.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 165/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E  DD  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGDDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|167765221|ref|ZP_02437334.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
 gi|167696849|gb|EDS13428.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
          Length = 370

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 172/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +       E  +   + +   DS +A LE+  GAGG E+ 
Sbjct: 71  IANETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ +    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCEAKGWRLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|121608524|ref|YP_996331.1| peptide chain release factor 1 [Verminephrobacter eiseniae EF01-2]
 gi|166223615|sp|A1WI56|RF1_VEREI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121553164|gb|ABM57313.1| bacterial peptide chain release factor 1 (bRF-1) [Verminephrobacter
           eiseniae EF01-2]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 119/334 (35%), Positives = 176/334 (52%), Gaps = 7/334 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QRL  L+     P +  ++++ + + RE   +            R  D     EL  +  
Sbjct: 14  QRLGELDFLLARPDIMADMVQYRSIAREHAEVTQVAGRYARYLQREADLGAARELLADPG 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLR 139
              + QE  D+ Q    ++E +    LL  E D + +A++E+ AG GG ES  +A  L R
Sbjct: 74  MAELAQEEIDSSQTELRQLEDELQRLLLPKEPDDARNAFVEIRAGTGGDESALFAGDLTR 133

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYTR+A +R ++ + L  +  E  G K   L I G   YG LK E G HR+ R+   ++ 
Sbjct: 134 MYTRYAARRGWQVQVLSENPAELGGYKEIVLRIDGEQVYGTLKFESGGHRVQRVPATETQ 193

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P  D +  I ++ ++ RIDT+RASGAGGQH+N TDSAVR+ H+PTG+
Sbjct: 194 GRVHTSACTVAVMPEPDPARAIALNPAELRIDTFRASGAGGQHINKTDSAVRVVHLPTGI 253

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316
           V +CQ  RSQH NKA+A  +L+A+L E E  +R   A      K  IG G    +IR+Y 
Sbjct: 254 VAECQDGRSQHGNKARALQVLQARLQEKERSER--AAKEAALRKGLIGSGERSDRIRTYN 311

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             P   + D R  +       +LDG+LD  ++A 
Sbjct: 312 F-PQGRLTDHRIQLTLYQLQQLLDGELDPMLQAL 344


>gi|212690981|ref|ZP_03299109.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|237712531|ref|ZP_04543012.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|237726705|ref|ZP_04557186.1| peptide chain release factor 1 [Bacteroides sp. D4]
 gi|265752224|ref|ZP_06088017.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
 gi|212666213|gb|EEB26785.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|229435231|gb|EEO45308.1| peptide chain release factor 1 [Bacteroides dorei 5_1_36/D4]
 gi|229453852|gb|EEO59573.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|263237016|gb|EEZ22486.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 170/346 (49%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L++ +   +E    L       ++
Sbjct: 12  LDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAKQI 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   +     ++ +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 72  MTNESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ 
Sbjct: 132 IFAGDLFRMYSKYCETKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 192 RVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 250

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG+V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 251 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +      +IR+Y   P   + D R N    + +  +DGD+ D + 
Sbjct: 311 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCID 355


>gi|111115018|ref|YP_709636.1| peptide chain release factor 1 [Borrelia afzelii PKo]
 gi|119361512|sp|Q0SNW8|RF1_BORAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110890292|gb|ABH01460.1| peptide chain release factor 1 [Borrelia afzelii PKo]
          Length = 357

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 130/342 (38%), Positives = 204/342 (59%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  R+  +  K +D +L +N  +   +++E  +L+   +     + I +++ DN  +
Sbjct: 6   LNSATSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQ 131
           LE   +++   ++++   +L + K  +E++    LL   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|332290785|ref|YP_004429394.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168871|gb|AEE18126.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 99/338 (29%), Positives = 171/338 (50%), Gaps = 8/338 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLEL 75
             QR   ++     P +  +      L +E   L           E+ + L +   ++  
Sbjct: 8   VKQRFDEISDLIIQPDIITDQKRYVQLNKEYSDLKALMEVREVYIELSENLKEAEEIIAD 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +   +  +    E+E K +   +     D+ +  +E+ AG GG E+  +A
Sbjct: 68  GSDAEMVEMAKMQYEEAKTGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             L RMYT++ +    +K   ++  +G   G K     I G + YG +K E GVHR+ R+
Sbjct: 128 GDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEAGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   +  +++I   D R+D + +SG GGQ VNTT SAVR+T
Sbjct: 188 PQTETQGRVHTSAATVMVLPEA-EEFDVQIEPKDVRVDFFCSSGPGGQSVNTTYSAVRLT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQI 312
           HIPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL +K+EE A    S  +      +I
Sbjct: 247 HIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQEEDAAKRNSQVSSGDRSAKI 306

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +      ++++GD+   ++  
Sbjct: 307 RTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILEEL 343


>gi|319777684|ref|YP_004137335.1| peptide chain release factor 1 [Mycoplasma fermentans M64]
 gi|318038759|gb|ADV34958.1| Peptide chain release factor 1 [Mycoplasma fermentans M64]
          Length = 358

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72
             +       L  K +D  +  N+ E   + +E   + +      +   +Q+   D  ++
Sbjct: 9   LSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +    EE+         +N  ++    E  +   L   E D  +  +E+   AGG E+  
Sbjct: 69  INSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGDEANI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVHR+ R
Sbjct: 129 FAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDSAVRI
Sbjct: 189 VPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++                +I
Sbjct: 249 THLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRSEKI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R     +    V++G L   ++A L  ++
Sbjct: 309 RTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 349


>gi|160887043|ref|ZP_02068046.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|237715527|ref|ZP_04546008.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262408537|ref|ZP_06085083.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|293369398|ref|ZP_06615983.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|294646503|ref|ZP_06724140.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294807531|ref|ZP_06766328.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|298482182|ref|ZP_07000370.1| peptide chain release factor 1 [Bacteroides sp. D22]
 gi|156107454|gb|EDO09199.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|229444236|gb|EEO50027.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262353402|gb|EEZ02496.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|292635565|gb|EFF54072.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|292638122|gb|EFF56503.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294445232|gb|EFG13902.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|295086791|emb|CBK68314.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           xylanisolvens XB1A]
 gi|298271739|gb|EFI13312.1| peptide chain release factor 1 [Bacteroides sp. D22]
          Length = 370

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 170/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +    E  +   + +   DS +A LE+  GAGG E+ 
Sbjct: 71  LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEIVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +        I   ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|295707229|ref|YP_003600304.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
 gi|294804888|gb|ADF41954.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
          Length = 325

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 106/320 (33%), Positives = 170/320 (53%), Gaps = 11/320 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
           +   +E+  +   ++  +E +D   +L +   +LE  L+ D   +++E    L+  + E+
Sbjct: 2   REYSKEQSDIQQTVAAYQEYKDVKEQLSEAKTMLEDKLDADMRDMVKEEIAELETQQEEL 61

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            E  +   +     D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E  
Sbjct: 62  VEKLRILLIPKDPNDDKNVIMEVRGAAGGDEAALFAANLYRMYSRFAESQGWKTEVMEAT 121

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
                G K    +I G  AY  +K E G HR+ R+   +S  R HTS +++   P   + 
Sbjct: 122 TTGVGGYKEIIFMINGKGAYSKMKFENGAHRVQRVPETESGGRIHTSTATVACLPEA-EE 180

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+PT  VV CQ E+SQ KNK +A  
Sbjct: 181 VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPTNTVVSCQDEKSQIKNKEKAMK 240

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +LRA++Y+    +RE  A    + K  +G G    +IR+Y   P   V D R  +     
Sbjct: 241 VLRARVYD--KFQREAQAEYDATRKQAVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKL 297

Query: 336 SDVLDGDLDDFMKATLAIKK 355
             +L+G LD+ + A +   +
Sbjct: 298 DQILEGKLDEIIDALVMEDQ 317


>gi|260576769|ref|ZP_05844754.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
 gi|259021021|gb|EEW24332.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
          Length = 351

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 174/345 (50%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R  FL  K           E   L RE   L   ++ I   +  L D      L
Sbjct: 7   LDQISRRFEFLEAKLAAG---AGHAEIASLSREYTDLKPVVAEISAYRRALDDLAQAEAL 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     + L  +K  +   +       L    AD+  A LE+  G GG E+ 
Sbjct: 64  LA---DPEMRPLAEEELPSLKARIPELEQALRLALLPKDAADARPAILEIRPGTGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ E ++  D +  GI+  T+ ++G   +  LK E GVHR+ 
Sbjct: 121 LFAADLLRMYQRYAESQGWRFEIIDQQDSDLGGIRDVTVHVQGAGVFAKLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++++I  SD RIDT RASGAGGQHVNTTDSAVR
Sbjct: 181 RVPETESQGRVHTSAATVAVLPEA-EEVDLDIPASDIRIDTMRASGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG++V   Q +SQH+N+  A  +LRA+LY+LE  + +   A   ++         
Sbjct: 240 ITHLPTGIIVTSAQ-KSQHRNRDLAMQVLRARLYDLERARVDGARAADRKAQVGSGDRSE 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+   +   ++ GDL   + A +A  +
Sbjct: 299 RIRTYNF-PQGRLTDHRINLTLYALPQIMAGDLGGVIDALVAQDQ 342


>gi|216263966|ref|ZP_03435960.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
 gi|215980010|gb|EEC20832.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
          Length = 357

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 129/342 (37%), Positives = 203/342 (59%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++   R+  +  K +D +L +N  +   +++E  +L+   +     + I +++ DN  +
Sbjct: 6   LNSVTSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQ 131
           LE   +++   ++++   +L + K  +E++    LL   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|325269739|ref|ZP_08136350.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
 gi|324987940|gb|EGC19912.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
          Length = 370

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 168/353 (47%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  + +   + L   + ++ ++E  + + LL      D  +  +E+  GAGG E+
Sbjct: 71  IANESDAEMKEMAREELSENEGLQPKIEE-EIKLLLVPKDPEDGKNVQMEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+
Sbjct: 130 ALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYIDDIASRRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           ++GD+ + + A    +
Sbjct: 309 LVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAE 360


>gi|110635328|ref|YP_675536.1| peptide chain release factor 1 [Mesorhizobium sp. BNC1]
 gi|119361558|sp|Q11E04|RF1_MESSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110286312|gb|ABG64371.1| bacterial peptide chain release factor 1 (bRF-1) [Chelativorans sp.
           BNC1]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 176/343 (51%), Gaps = 14/343 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R   + T+    P           L  E   L    + I+ ++    +   L  +
Sbjct: 10  DQVLKRFELIETQMAAGPS----PDAYVKLASEYSELQEVANSIRALRKAEAELEDLDTM 65

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  I +    + + ++  VE      Q   L   EAD  +A LE+ AG GG E+
Sbjct: 66  LADKSIDREIRELAEIDREEVESRVEDMQQKLQVLLLPKDEADEKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +R ++ E +   +GE  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEIIASVTGRGVFSRLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+++I   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPATEAQGRIHTSAATVAVLPEA-EDIDVDIKPEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+PTG++V    E+SQH+N+A+A  +LRA+L+++E  +     +     +   G   
Sbjct: 245 RITHLPTGIMV-VSAEKSQHQNRARAMQILRARLFDMERSRAANERSEARRLQVGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+       V++G+LD+ + A +A
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDEVIDALIA 345


>gi|159044282|ref|YP_001533076.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
 gi|189039970|sp|A8LLU7|RF1_DINSH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157912042|gb|ABV93475.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
          Length = 351

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 173/347 (49%), Gaps = 18/347 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  ++  +       +++     L RE   L   ++ I        D      +
Sbjct: 7   LAQITERFEYIEARMAAGAAGEDIA---ALGREYAELKPVVAEIAAYSRARADLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     + +  +K  +   +       L    AD+  A +E+  G GG E+ 
Sbjct: 64  L---DDPEMRALAEEEIPALKARIPEMEQALRLALLPKDAADARPAMIEIRPGTGGEEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ + +     E  GIK     + G   +  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAHVSGSGVFAKLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   ++++I+I  SD RIDT RASGAGGQHVNTTDSAVR
Sbjct: 181 RVPVTESGGRIHTSAATVAVLPEA-EAVDIDIPASDIRIDTMRASGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV    E+SQH+N+  A  +LRA+LY+LE   +   A    + K ++G G  
Sbjct: 240 ITHIPTGLVVTSS-EKSQHRNRDIAMQVLRARLYDLER--QRADAERSAARKGQVGSGDR 296

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       V+ GDLD+ + A  A  +
Sbjct: 297 SERIRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIAALAADDQ 342


>gi|208434043|ref|YP_002265709.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
 gi|238058715|sp|B5Z680|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
          Length = 352

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|134102728|ref|YP_001108389.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291007815|ref|ZP_06565788.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915351|emb|CAM05464.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 357

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 126/349 (36%), Positives = 182/349 (52%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP +  +   A+ L R    L   +   KE+     D     EL
Sbjct: 6   LDGLLAEYAELERRLADPEVHADQAGARKLGRRYAELTPVVRCSKELDQARSDLATAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
           A E+       E +++L      +E K  E LL     D++D  LEV +G GG ES  +A
Sbjct: 66  ADEDP---AFAEEAESLAESVPALEAKLTELLLPRDPHDASDVLLEVKSGEGGEESALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGV 187
             LLRMY R+AE++ ++TE L+  + +  G K AT+ +K           +  LK E GV
Sbjct: 123 GDLLRMYLRFAERQGWRTEILDATESDLGGYKDATVAVKTKAGDTGPDGVWSKLKFEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + VYP  ++       E D RID YR+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEVEV-DEKDLRIDVYRSSGPGGQSVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVRITH+PTG+VV CQ E+SQ +NK +A  +LRA+L  L  ++ E  A+    S+   +
Sbjct: 242 SAVRITHLPTGIVVSCQNEKSQLQNKIRAIQVLRARLQALAEEEAEREASETRRSQVRTV 301

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R N +  +   VLDGDLD  + A +A  +
Sbjct: 302 DRSERIRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVLGALVAADR 349


>gi|195941927|ref|ZP_03087309.1| peptide chain release factor 1 [Borrelia burgdorferi 80a]
          Length = 357

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 126/345 (36%), Positives = 197/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++   ++  +  K +D +L ++  +   +++E  +L+   +     ++I  ++ D   +
Sbjct: 6   LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYRLEEFMQGELDPLLDPL 343


>gi|29349618|ref|NP_813121.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570013|ref|ZP_04847422.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298383879|ref|ZP_06993440.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
 gi|32171531|sp|Q8A011|RF1_BACTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29341528|gb|AAO79315.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840394|gb|EES68476.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298263483|gb|EFI06346.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
          Length = 370

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 170/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +    E  +   + +   DS +A LE+  GAGG E+ 
Sbjct: 71  LSNESDADMREMAKEEMDNSQERLPALEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGYKEIVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|325856854|ref|ZP_08172352.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|327314543|ref|YP_004329980.1| peptide chain release factor 1 [Prevotella denticola F0289]
 gi|325483227|gb|EGC86204.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|326945459|gb|AEA21344.1| peptide chain release factor 1 [Prevotella denticola F0289]
          Length = 370

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 168/353 (47%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  + +   + L   + ++ ++E  + + LL      D  +  +E+  GAGG E+
Sbjct: 71  IANESDAEMKEMAREELSENEELQPKIEE-EIKLLLVPKDPEDGKNVQMEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+
Sbjct: 130 ALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYIDDIASRRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           ++GD+ + + A    +
Sbjct: 309 LVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAE 360


>gi|270292697|ref|ZP_06198908.1| peptide chain release factor 1 [Streptococcus sp. M143]
 gi|270278676|gb|EFA24522.1| peptide chain release factor 1 [Streptococcus sp. M143]
          Length = 359

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIIDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|83953606|ref|ZP_00962327.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
 gi|83841551|gb|EAP80720.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
          Length = 351

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 173/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I   +  L D      +
Sbjct: 7   LAQITQRFQFLEASMSAGS---DGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    + E   Q   L   EAD   A LE+  G GG E+  +A
Sbjct: 64  LKDTEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  G+K     IKG N +  LK E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYAEARGWKFELIEQQFTELGGVKEVVAHIKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 STESGGRIHTSAATVAVLPEA-EDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+A+LY++E Q+ +   +   +++   G    +IR
Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDMERQRVDSERSASRAAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 302 TYNF-PQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTA 339


>gi|194364499|ref|YP_002027109.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693440|sp|B4SKS8|RF1_STRM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194347303|gb|ACF50426.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
          Length = 360

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 107/321 (33%), Positives = 168/321 (52%), Gaps = 8/321 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P +  +    + L RE   L+   + + +      D      +  + D   +  E     
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPIATALADETRAKADLAAAEGMRADPDLRELADEEIAAA 85

Query: 93  Q-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           Q R++   +      +     D  + +LEV AG GG E+  +A  L RMY R+AE++ +K
Sbjct: 86  QARLQELEQELALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + GE  G K     + G  A+  LK E G HR+ R+   +S  R HTS +++ +
Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  +I I+ +D R+DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH 
Sbjct: 206 IPEADEVDDIVINPADLRVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328
           N+ +A   L+A+L + E   + + A   ES + ++G G    +IR+Y   P   + D R 
Sbjct: 266 NRDKAMKRLKAQLLDAER--QRQDAAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322

Query: 329 -NIEKTSPSDVLDGDLDDFMK 348
             +      ++L GDLD  ++
Sbjct: 323 EGLTLYDLPNILAGDLDPLLQ 343


>gi|160872697|ref|ZP_02062829.1| peptide chain release factor 1 [Rickettsiella grylli]
 gi|159121496|gb|EDP46834.1| peptide chain release factor 1 [Rickettsiella grylli]
          Length = 363

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/337 (32%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            VQR   L     +  + ++    + L +E   L   +   ++ Q  L D L   E  L+
Sbjct: 12  IVQRYEELTALLANIEVIKDQNHFRNLSKEYVQLGPLVQCFQQYQTNL-DRLNQAEHCLK 70

Query: 79  EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + D  + +   + ++  + +     +  +   L     D  + +LE+ A AGG E+  +A
Sbjct: 71  DKDAIVQELAMEEMKIAQQKKIELEKELEHLLLPQDPNDDRNVFLEIRAAAGGDEAAIFA 130

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE + +  E +  +  E+ G K     I G   Y  LK E G HR+ R+ 
Sbjct: 131 GDLFRMYSRYAESQHWHVEIIHRNPSEQGGYKEIIARISGTKVYAHLKFESGAHRVQRVP 190

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P ++   +I +  SD +IDT+RASGAGGQHV  TDSA+RITH
Sbjct: 191 ETEAQGRVHTSTCTVAILPEIESMDDITLHPSDLKIDTFRASGAGGQHVQKTDSAIRITH 250

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           +P+G+VV+CQ ERSQHKN+A+A ++L+AKL   +  K R E A              +IR
Sbjct: 251 LPSGLVVECQDERSQHKNRARAMSLLQAKLLAAQKAKQRREEAETRRDLVGTGDRSERIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +Y   P   + D R N+     SD+++G L+  +++ 
Sbjct: 311 TYNF-PQGRLTDHRINLTLYQLSDIMEGHLEPVIQSL 346


>gi|49473852|ref|YP_031894.1| peptide chain release factor 1 [Bartonella quintana str. Toulouse]
 gi|61214617|sp|Q6G0R0|RF1_BARQU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49239355|emb|CAF25688.1| Peptide chain release factor 1 [Bartonella quintana str. Toulouse]
          Length = 359

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 179/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++   +P    +      L  E   L   ++ I+ +     +   L  + 
Sbjct: 11  QLEKRFEIIESQMAKNP----DSGTYVKLASEYADLQPIVTSIRTLNALSIEITELETII 66

Query: 77  LEE-DDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +     + L    Q+++   +  Q   L     D   A +E+ AG GG+E+ 
Sbjct: 67  SDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A    +K E + +++GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETETSGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E +K E   +    ++   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIEQKKAESERSASRKNQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +L+GDLD+ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDELINALIS 345


>gi|322389535|ref|ZP_08063086.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
 gi|321143810|gb|EFX39237.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
          Length = 359

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|326386588|ref|ZP_08208210.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208903|gb|EGD59698.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 356

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 174/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + L  +     L  +        R+   L+      ++++    +   L   
Sbjct: 8   LDQIAARFAELEARLASGTL--DAEAFIAASRDYAELEPVAHTARDVRLLRDELASLA-- 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           AL+E D  +     + + RI+ E+   +       L    ADS+ A LE+ AG GG E+ 
Sbjct: 64  ALDEPDADMRALAEEEMARIRAELPEAERRLALAMLPRDNADSHPAMLEIRAGTGGDEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E +  +  +  G K     + G   +  LK E GVHR+ 
Sbjct: 124 LFAADLFRMYERYAAEQGWKVEVISANASDIGGFKEVIAHVAGQGVFAKLKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D +++ I + D +ID YRASGAGGQHVNTTDSAVR
Sbjct: 184 RVPVTESGGRIHTSAATVAVLPEP-DEVDVSIDDKDLKIDIYRASGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+VV  Q ERSQHKNKA+A  +LR +LY+L  ++ +   A    +         
Sbjct: 243 ITHLPTGIVVTQQDERSQHKNKAKAMQVLRTRLYDLRREQAQGAEAEARRAMVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+      ++L G  L + + A  A  +
Sbjct: 303 RIRTYNF-PQGRVTDHRINLTLHRLPEILAGTGLGELIDALTAEDQ 347


>gi|228477589|ref|ZP_04062222.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
 gi|228250733|gb|EEK09931.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
          Length = 359

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTAYREYKQVIQSISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|251782311|ref|YP_002996613.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390940|dbj|BAH81399.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127208|gb|ADX24505.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 359

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIADAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDSELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQ 350


>gi|312863805|ref|ZP_07724043.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
 gi|311101341|gb|EFQ59546.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
          Length = 359

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350


>gi|261886265|ref|ZP_06010304.1| peptide chain release factor 1 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 355

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 21/343 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELAL 77
            R + LN+   DP +  ++     L +E+++L+   +A      I + + +N  LLE   
Sbjct: 11  DRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLE--- 67

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +   D L+ ++ E+    E  +   L     D  + +LE+ AG GG E+  +
Sbjct: 68  ---DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L   Y R+ E+R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+
Sbjct: 125 VGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQRV 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P V+DS EI+I+ +D +ID  R+SG GGQ VNT+ S+VR+T
Sbjct: 185 PETESQGRVHTSAITVAIMPEVEDS-EIDINPNDLKIDVMRSSGHGGQSVNTSVSSVRVT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           HIPTG+VV  Q  +SQHKNK  A  +L+A+LY+++  +RE      +  K ++G G    
Sbjct: 244 HIPTGLVVVNQDGKSQHKNKDAAIKVLKARLYDMQ--ERERREKESKERKDQVGTGDRSG 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
           +IR+Y   P   + D R N+       ++   L D+ +   +A
Sbjct: 302 RIRTYNY-PQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIA 343


>gi|78780006|ref|YP_398118.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9312]
 gi|119361576|sp|Q318L3|RF1_PROM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78713505|gb|ABB50682.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 364

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  +  DP +  +  + + + RER  L+  +    ++ D   +      L
Sbjct: 10  LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNL 69

Query: 76  ALE----EDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTES 130
             E    ++  S++ E   NL+  K ++  K   +LL     D     LE+ AGAGG+E+
Sbjct: 70  LKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAGGSEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L  +E  A       +++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQ 352


>gi|49475009|ref|YP_033050.1| peptide chain release factor 1 [Bartonella henselae str. Houston-1]
 gi|61214620|sp|Q6G5T7|RF1_BARHE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49237814|emb|CAF27009.1| Peptide chain release factor 1 [Bartonella henselae str. Houston-1]
          Length = 359

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 181/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++   +P    N      L  E   L   +S I+ +     +   L  + 
Sbjct: 11  QLEKRFEIIESQMAKNP----NAEIYVKLASEYAELQPIVSSIRALNALYGEITDLETII 66

Query: 77  LEE-DDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +     + L    Q+++   +  Q   L    AD   A +E+ AG GG+E+ 
Sbjct: 67  SDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  R +K E + +++GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIATISGRGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E   +    S+   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAENERSASRKSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       VL+GDLD+ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRVLEGDLDELIHALIS 345


>gi|240849863|ref|YP_002971251.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
 gi|240266986|gb|ACS50574.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
          Length = 358

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 179/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +   +P    N      L  E   L   I+ I+ +     +   L  + 
Sbjct: 11  QLEKRFEIIERQMTTNP----NAETYVKLASEYAELQPVIASIRALNALYKEITELETII 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +     + L  +  +VE  + E     L    AD  +A +E+ AG GG+E+ 
Sbjct: 67  NDKQTDVEMRNLAQEELPLLYKKVEQFEKELQILLLPKDVADEKNAIVEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY R+A    +K E + + +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+I+I   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLPEA-EEIDIDIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E   +    S+   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +L+GDLD+ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDELLHALIS 345


>gi|237750909|ref|ZP_04581389.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
 gi|229373354|gb|EEO23745.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
          Length = 356

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 178/340 (52%), Gaps = 11/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++R   L        +  ++ +   L +E+   D  ++  KE    L D      L  +
Sbjct: 9   IIERNDALAAMLSTEEVINDIAKLTALSKEKSESDEIVAKAKEYLKVLDDITSNKALLED 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136
           ++   + +E    L+  +  +E  + + LL      D  + YLE+ AG GG E+  +   
Sbjct: 69  KELGELAKEELKELEIAQKNLED-EIKILLIPKDPNDKKNIYLEIRAGTGGDEAGIFVGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L   Y R+A+ +++K E +   +    G K    L+KG  AY  LK E G HR+ R+   
Sbjct: 128 LFSAYCRYADSKQWKVEIISSSENSVGGYKEMIALVKGDGAYSRLKYEGGTHRVQRVPKT 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P V DS+EI I+ +D +ID +R+ G GGQ VNTTDSAVRITHIP
Sbjct: 188 ESQGRIHTSAITVAIMPEV-DSLEININPNDLKIDVFRSGGHGGQSVNTTDSAVRITHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V  Q E+SQHKNK +A  +L+A+LYE EL    + A   ES K ++G G    +IR
Sbjct: 247 TGISVSMQDEKSQHKNKDKALKILQARLYEAEL--EAQNAQNRESRKNQVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + D R N+   S  +++  GDLD  +   +A
Sbjct: 305 TYNY-PQNRMSDHRINLTLYSLEEIMLSGDLDKVIDPLIA 343


>gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
 gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
          Length = 357

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 172/345 (49%), Gaps = 18/345 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R + +              E   L RE   L   +  ++ ++    D     EL
Sbjct: 10  LDQLVARHAEVEALLAAG---AEGEEYVRLGREFSDLSPVVEQVRALRAAERDLADAREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +       + R++ E+E      +   L     D     LEV AG GG E+ 
Sbjct: 67  LA---DPEMRDLAQSEVTRLEAELETLAKEVRLALLPKDAMDERGVILEVRAGTGGDEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +  E L   +G   G K     + G  AY  LK E GVHR+ 
Sbjct: 124 LFAGDLFRMYARYAAEKGWSVELLSESEGTVGGYKEVVAAVHGRGAYARLKFESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + ++++I+ESD RID YRA GAGGQHVN T+SAVR
Sbjct: 184 RVPDTETSGRIHTSAATVAVLPEA-EDVDVDINESDLRIDVYRAQGAGGQHVNKTESAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q ERSQH+NKA+A  +LR+++ + E   ++  AN     K ++G G  
Sbjct: 243 ITHIPTGMVVAVQDERSQHRNKARAMALLRSRMLDEER--QKADANRAADRKGQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             +IR+Y   P   V D R N+      +V+ G  LD+ +   L 
Sbjct: 301 SERIRTYNF-PQGRVTDHRINLTLYKLDEVMTGQALDEIIDPLLT 344


>gi|281358665|ref|ZP_06245143.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
 gi|281314895|gb|EFA98930.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
          Length = 362

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N   R + L     DP ++    E + + +E + L+       + +  L +     E+
Sbjct: 10  IENLHGRFAELEAALADPAIYARGAECRRVSQEHRKLETLFRKFDDWRKALAELADNREM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +  + ++  ++   +  +       L     D+ +  + +   AGG E+ 
Sbjct: 70  LTAETDAELRELIAADIADLEERAQKLEADIQISLLPPDPNDAKNIIVGIKPAAGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L R Y ++AEK+ ++ E L+  D E  GIK  +  + G   Y  +K E GVHR+ 
Sbjct: 130 LFAGELFRAYMKFAEKKGWRIEVLDQTDTELGGIKDVSFSLSGDEVYSLMKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +E++I   D R D +R+SG GGQ VNTTDSAVR
Sbjct: 190 RVPATEAGGRIHTSTVTVAVMPEA-EEVELDIRPEDLRFDVFRSSGPGGQCVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+ V  QQE+SQH+NK  A  +L A+L  LE +++EE        ++++G G  
Sbjct: 249 VTHIPTGIAVASQQEKSQHRNKEIALRILYARL--LEHKQQEEADKQAADKRSQVGTGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +IR+Y   P   V D R N+       +++G+LD  +   L I
Sbjct: 307 SERIRTYNF-PQNRVTDHRFNVNTFDLPKLMEGELDLILDQILMI 350


>gi|302785656|ref|XP_002974599.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
 gi|300157494|gb|EFJ24119.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
          Length = 386

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 23/350 (6%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   R + L+    +P +  +  E   + +E + LD ++  IK ++ +  + + L EL  
Sbjct: 26  SIEDRHACLSKALLEPGIASD--ELIKMNKELRKLDYSVDMIKALRAKEKEVIGLKELVK 83

Query: 78  EE-DDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHA--------G 124
           E  +D  + +  S  LQ    EV   Q + LL      EADS    LE           G
Sbjct: 84  ESVEDEEMRRLASGELQTATREVRDAQHDVLLKLIPKDEADSRGCILEASCLICFIYLLG 143

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A+ L +MY ++A    ++ E L I   +  G K A+ +I G + YG LK E
Sbjct: 144 AGGDEASIFASDLFKMYEKYAANNSWRFEVLSITTTDTRGYKEASAVISGDDVYGALKFE 203

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +   R HTS +S+ + P  ++ +++EI   + +IDTYRA GAGGQHVN
Sbjct: 204 SGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-VDVEIRNDEIKIDTYRAGGAGGQHVN 262

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH PTG+VV  Q ERSQHKNKA+A ++L A+LYELE  +    A+  E  + 
Sbjct: 263 TTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AAASRSELRQD 320

Query: 305 EIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
           +IG      +IR+Y   P   V D R  + + S   +++G  L+ F+ A 
Sbjct: 321 QIGSSDRSERIRTYNF-PQGRVTDHRVGVTQHSIEQIMEGIGLEIFVNAL 369


>gi|166368082|ref|YP_001660355.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
 gi|189039979|sp|B0JYC5|RF1_MICAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166090455|dbj|BAG05163.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
          Length = 366

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 183/350 (52%), Gaps = 10/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q    L  +  DP +  N  E   L + R  L+  ++  +  Q    D + 
Sbjct: 6   LLDKLQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIG 65

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
             ++  E   D  + +  +  +  ++ ++   +       L     D  +  LE+ AG G
Sbjct: 66  AKQIFKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  L+R+Y+++AE + +K   L     +  G K A L IKG N Y  LK E G
Sbjct: 126 GDEASIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEIKGDNVYSKLKFEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +++ R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPLTEASGRVHTSTATVAIMPEV-DDVEVHIDPKDIELTTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AV + H PTG+ V C +ERSQ +N+ +A  +LRAKLY+++LQ+++E  +    S+   
Sbjct: 245 ETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRSQVGT 304

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y  +  ++  D R N +  S   +LDGD+++ +++ +A  +
Sbjct: 305 GSRSEKIRTYNYKDNRL-TDHRLN-QNFSLDRILDGDIEEVIQSCIAKDQ 352


>gi|220920161|ref|YP_002495462.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
 gi|254790889|sp|B8IUB4|RF1_METNO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219944767|gb|ACL55159.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
          Length = 359

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +           +      L RE   LD+ ++ I+  +    +    +E 
Sbjct: 9   LDAILARHDIVTATLSAGE--ADSESFVQLSRELSDLDDVVAAIRAYRAADAELRG-VEA 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            LEE D  +    ++    ++   +      Q   L    AD   A LE+ AG GG E+ 
Sbjct: 66  MLEEGDPEMRALAAEEKPEVEAARDAAAKALQILLLPKDSADEKSAILEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A+ + +K E +    G   G +     +KG   +  LK E G HR+ 
Sbjct: 126 LFAGDLFRMYARYADLKGWKVEVVSESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I ++E+D +IDT RA GAGGQHVN T+SA+R
Sbjct: 186 RVPETETQGRIHTSAATVAVLPEA-EEVDIHVNEADLKIDTMRAQGAGGQHVNKTESAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+P+G+VV  Q+ERSQHKN+A+A  +LRA+LYE E  +++        ++   G    
Sbjct: 245 ITHMPSGIVVFVQEERSQHKNRARAMAVLRARLYEQERSQKDAARAADRRAQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
           +IR+Y   P   V D R N+      +VL G  LD+ + A + 
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELVDALVT 346


>gi|184200614|ref|YP_001854821.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
 gi|238689221|sp|B2GLX4|RF1_KOCRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183580844|dbj|BAG29315.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
          Length = 369

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 174/343 (50%), Gaps = 10/343 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + L  +  DP +  +   A+ L R    L+  +   + ++    D     EL   
Sbjct: 8   LLDEHAQLQRELADPAVHADAGRARKLGRRYSELNGIVEAHRRVERLSEDLEAARELGSM 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D  +  E     + + +  E  + + +     D  +  LEV AG GG ES  +A  LL
Sbjct: 68  --DPELAAEVKPLEEELAVAREALRRKLVPRDPDDGRNVILEVKAGEGGDESALFAGDLL 125

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRLVR 192
           RMY R+AE+   KTE L     E  G K   L +KG        A+   K E GVHR+ R
Sbjct: 126 RMYMRFAEQSGLKTEILSSTPTELGGYKDVQLAVKGSSSDPSEGAWARFKYEGGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + V+P VD+  EI+IS++D +ID YR+SG GGQ VNTTDSAVRI
Sbjct: 186 VPVTESQGRVHTSAAGVLVFPEVDEPDEIDISQNDLKIDVYRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQ 311
           TH+PTG+VV  Q E+SQ +N+  A  +LRA+L   + ++ + E A   +S    +    +
Sbjct: 246 THVPTGIVVSMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAARKSQVRTVDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D RT  +  +   VLDG L+  + + + + 
Sbjct: 306 IRTYNF-PENRIADHRTGYKAYNLDHVLDGALEPVIASAVELD 347


>gi|123969269|ref|YP_001010127.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           AS9601]
 gi|229470358|sp|A2BTA9|RF1_PROMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123199379|gb|ABM71020.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           AS9601]
          Length = 364

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 176/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  +  DP +  +  + + + RER  L+  +    ++ D   +      L
Sbjct: 10  LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNL 69

Query: 76  ALE----EDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTES 130
             E    ++  S++ E   NL+ IK E+  K   +LL     D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I   D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVKIDPIDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L  +E  A       +++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQ 352


>gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM
           7109]
 gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
           7109]
          Length = 371

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +     L  +  DP L  +   A+ + +  Q L   I   + +     D+    E+A
Sbjct: 22  DDILSEYQGLEAQLADPELHNDPKAARRVGKRFQELQPVIQTYERLNTAREDHEAAAEMA 81

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E  D    +E +     I+   E            + +D  +E+ +GAGG E+  +A  
Sbjct: 82  SE--DAEFAEEATRLEAEIEELQEKLTDLLAPRDPKNGDDIIMEIKSGAGGEEAALFAGE 139

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRLV 191
           L RMY R+AE+  F TE L +++ +  G+K  T+ I+        A+   K E GVHR+ 
Sbjct: 140 LARMYQRYAERHGFATEVLGLNETDLGGVKDMTMSIRSKQPSRDGAWADFKFEGGVHRVQ 199

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS + + VYP  D+  ++EI E D R+D YR+SG GGQ VNTTDSAVR
Sbjct: 200 RVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKDIRVDVYRSSGKGGQGVNTTDSAVR 259

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTGVVV CQ+ERSQ +N+A+A  +L A+L +++ ++ E  A  G +++   +    
Sbjct: 260 ITHLPTGVVVTCQKERSQIQNRARAMQVLAARLQQMKEEEAEAEAAEGRAAQIRTMDRSE 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R   +  +   VLDGDL+    A    ++
Sbjct: 320 RIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLESLFAALKEAER 363


>gi|262282281|ref|ZP_06060049.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
 gi|262261572|gb|EEY80270.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
          Length = 359

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|157150598|ref|YP_001450441.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|172046863|sp|P47850|RF1_STRGC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157075392|gb|ABV10075.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 359

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|303232564|ref|ZP_07319250.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
 gi|302481351|gb|EFL44425.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
          Length = 354

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 115/333 (34%), Positives = 173/333 (51%), Gaps = 11/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +  E   + +E  H    ++  KE    L D     E+
Sbjct: 5   LEKLIAAYAELEKKMVDPAVVADQKEYTRIAKEHAHQSELVALAKEYIAALDDIEAAKEM 64

Query: 76  ALE--EDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E   D+  +LQ + + N +++    +  +   +     D  D  +E+ A AGG E+  
Sbjct: 65  LHEASSDEREMLQADIAANEEKLPALEDDIKIMLIPGDPNDEKDTIVEIRAAAGGDEAAI 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MY R+A+ + +K E L     E  G K+    + G   Y  +K E GVHR+ R
Sbjct: 125 FAGDLYKMYERFADSKHWKIEVLSSSPSEAGGFKTIEFKMLGDKVYSVMKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R  TS +++ V P   D I+++I  +D RIDTY ASG GGQ VNTT SAVRI
Sbjct: 185 VPKTESQGRIQTSTATVAVLPEA-DEIDVQIDPTDLRIDTYCASGPGGQCVNTTYSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL+K++  A  G    ++IG G   
Sbjct: 244 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQ--AEQGAERLSQIGRGNRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            +IR+Y  QP   V D R     ++ + VL GD
Sbjct: 302 EKIRTYN-QPQDRVTDHRIGF-NSTYNGVLLGD 332


>gi|94988610|ref|YP_596711.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS9429]
 gi|94990486|ref|YP_598586.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10270]
 gi|94992434|ref|YP_600533.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS2096]
 gi|94994408|ref|YP_602506.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10750]
 gi|139473768|ref|YP_001128484.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
 gi|119361619|sp|Q1JBR9|RF1_STRPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361620|sp|Q1JLQ2|RF1_STRPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361621|sp|Q1JGV2|RF1_STRPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361622|sp|Q1J6M1|RF1_STRPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223610|sp|A2REH9|RF1_STRPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94542118|gb|ABF32167.1| bacterial peptide chain release factor 1 (RF-1) [Streptococcus
           pyogenes MGAS9429]
 gi|94543994|gb|ABF34042.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10270]
 gi|94545942|gb|ABF35989.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS2096]
 gi|94547916|gb|ABF37962.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10750]
 gi|134272015|emb|CAM30254.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
          Length = 359

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|307709438|ref|ZP_07645895.1| peptide chain release factor 1 [Streptococcus mitis SK564]
 gi|307619752|gb|EFN98871.1| peptide chain release factor 1 [Streptococcus mitis SK564]
          Length = 359

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K+E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKVEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
 gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
          Length = 357

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   K++ +   D     E+
Sbjct: 8   VDDILSEYHGLEAQLADPELHNDPKAARKVGKRFNELQPVIQTHKKLTEVQDDLEAAREM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E        +   E            DS+D  +E+ +GAGG E+  +A 
Sbjct: 68  AYE--DSEFAAEAERLAAEAEELEEKLADLLAPRDPHDSDDIVMELKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AEK  F TE L + + +  G+K  T+ I+        A+   K E GVHR+
Sbjct: 126 ELARMYQRYAEKHGFTTEILGLSESDLGGVKDMTMSIRAKTPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  +I+I E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVEDIQIDEKDLRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+VV CQ+ERSQ +NKA+A  +L A+L ++ E +  E  ++  +S    +   
Sbjct: 246 RLTHLPTGLVVTCQKERSQIQNKARAMQVLAARLQQMKEEEIAEAASDQRKSQVRNMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R   +  +   VL GD+DD +KA    ++
Sbjct: 306 ERIRTYNF-PENRVSDHRIGYKAHNLDSVLGGDMDDLLKALHDAER 350


>gi|189347853|ref|YP_001944382.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
 gi|189342000|gb|ACD91403.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
          Length = 249

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 128/246 (52%), Positives = 175/246 (71%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LSG+ D  +A + +HAGAGGTE+QDWA +L RMY RWAE++ FK    +  +G+ AGIK
Sbjct: 1   MLSGKDDPGNAIITIHAGAGGTEAQDWAEILYRMYMRWAERKGFKVYTDDYQEGDGAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +ATL I+G  AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + 
Sbjct: 61  TATLEIQGQYAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKE 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  + T+R+ G GGQ+VN  ++AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+
Sbjct: 121 DLELSTFRSGGKGGQNVNKVETAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQ 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            + ++ E      E  K +I WG QIRSYVL   + +KD RTN E+     VLDGDLD F
Sbjct: 181 RQREEEEAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLDAF 239

Query: 347 MKATLA 352
           M+  L+
Sbjct: 240 MEKYLS 245


>gi|294786650|ref|ZP_06751904.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315226253|ref|ZP_07868041.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
 gi|294485483|gb|EFG33117.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315120385|gb|EFT83517.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
          Length = 366

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 170/345 (49%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A+     +  +   P +  +  + + L R    L   +S  +  +    D     E A E
Sbjct: 13  ALDEYHEIERQMSQPEVASDPDKIRKLGRRHAELGQIVSAYESYRQIRDDLEAAQEFASE 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S  QE       +    E  +   +     D+ D  +E+ AGAGG E+  +A  LL
Sbjct: 73  --DESFAQEAQRLEADLPEAAEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAGDLL 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLV 191
           RMYTR+AEKR + TE +  +  E  G+K   +  +           +  LK E GVHR+ 
Sbjct: 131 RMYTRYAEKRSWSTEIMSQNMTELGGVKDIQIAFRSKGVVAPADGVWASLKYEGGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  DD   EIE+   D +ID + +SG GGQ VNTT SAV
Sbjct: 191 RIPVTESQGRIQTSAAGVIVFPEADDDDDEIEVDPKDLKIDIFMSSGPGGQSVNTTYSAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWG 309
           R+THIPTG+VV  Q E+SQ +N+  A  +L+++L  ++ ++  +E A++  S    +   
Sbjct: 251 RMTHIPTGIVVSMQDEKSQIQNRQAALRVLKSRLLAMKHEEEAQEAADMRHSQVRSLDRS 310

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 311 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIKAD 354


>gi|306827355|ref|ZP_07460642.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
 gi|304430502|gb|EFM33524.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
          Length = 359

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y       V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNFS-QNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|332886361|gb|EGK06605.1| peptide chain release factor 2 [Dysgonomonas mossii DSM 22836]
          Length = 318

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 131/315 (41%), Positives = 199/315 (63%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +   E    +  +E  +  +     +E  + +
Sbjct: 1   MKIIRGLKGWIEGYNEVKASTDELQLAFDFQKEG--ITTEEEVDEAYKNALSLIENLELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L++++GAGGTE QDWA+ML RMY RW E +K+KT      DG+EAGI
Sbjct: 59  NMLRREEDKLGAVLKINSGAGGTEGQDWASMLFRMYQRWCEDKKYKTTITNWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL ++G  AYG+LK E GVHRLVR+SP+++  +R TSF+S++V P+VDD+I+I+I+ 
Sbjct: 119 KTATLQVEGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVVPLVDDTIDIDINL 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           SD   DT+R+SGAGGQ+VN  ++ VR+ +      TG    +V++  + RSQ  NK  A 
Sbjct: 179 SDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDNAI 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +L+++LYELEL++R    +  E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLKSQLYELELERRSREQSKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGDLDDF+K  L 
Sbjct: 298 VMDGDLDDFIKEYLM 312


>gi|306825267|ref|ZP_07458609.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432703|gb|EFM35677.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 359

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGHSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|254511294|ref|ZP_05123361.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535005|gb|EEE37993.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
          Length = 357

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 177/342 (51%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR  +L     D     ++     L +E   L   +  I   +  + D      +
Sbjct: 13  LEQITQRFQYLEAAMADGASGGDIA---ALAKEYSDLKPVVDQILGWRQLVADLAEAEAM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    LQ    E E+  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 70  LSDPDMKELAEEEIPQLQARIPEAEHALQLALLPRDAADARPAMLEIRPGTGGDEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R ++ E +E    +  GIK     IKG N +  +K E GVHR+ R+ 
Sbjct: 130 GDLLRMYQRYAEGRGWQFEIIEEQASDLGGIKEVVAHIKGDNVFARMKYESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 190 ETESGGRIHTSAATVAVLPEA-EDVDIQIDANDIRIDTMRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +P+G+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 249 LPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSARSADRASQVGSGDRSERIR 307

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+       V+ GDLD+ + A  A  +
Sbjct: 308 TYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALTADDQ 348


>gi|309800291|ref|ZP_07694464.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
 gi|308116075|gb|EFO53578.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
          Length = 359

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIIDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|298292694|ref|YP_003694633.1| peptide chain release factor 1 [Starkeya novella DSM 506]
 gi|296929205|gb|ADH90014.1| peptide chain release factor 1 [Starkeya novella DSM 506]
          Length = 365

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 120/345 (34%), Positives = 173/345 (50%), Gaps = 18/345 (5%)

Query: 16  WDNAVQRLSFLN-TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + +    + +P    +      L RE   L      +K ++           
Sbjct: 9   LDQLLARHAEIEHALSANP----DAETYVRLSREFAELSPLTDSVKALRSAERQLTDART 64

Query: 75  LALEE-DDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           LA E   D  +     + +  ++ +VE      +   L     D     LEV AG GG E
Sbjct: 65  LAAEAAGDKEMAALAEEEVASLEEQVETLTHAVRLALLPKDAMDERGVILEVRAGTGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A    +  E L + +G   G K     + G  AY  LK E GVHR
Sbjct: 125 AALFAGDLFRMYERFAGLNGWSVEVLSLTEGTAGGFKEIVAALHGSGAYAKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   + + R HTS +++ V P V + ++I I+ESD RID +RASGAGGQHVN T+SA
Sbjct: 185 VQRVPETEGSGRIHTSAATVAVLPEV-EDVDIAINESDLRIDVFRASGAGGQHVNKTESA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG VV  Q ERSQHKNKA+A  MLRA++YE E +KR+  +      K ++G G
Sbjct: 244 VRITHLPTGTVVAVQDERSQHKNKARAMGMLRARIYEAEREKRD--SARASERKVQVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
               +IR+Y   P   V D R  +      ++L G+ L + + A 
Sbjct: 302 DRSERIRTYNF-PQGRVTDHRIGLTLHKLPEILSGEGLGELVDAL 345


>gi|56751903|ref|YP_172604.1| peptide chain release factor 1 [Synechococcus elongatus PCC 6301]
 gi|81301012|ref|YP_401220.1| peptide chain release factor 1 [Synechococcus elongatus PCC 7942]
 gi|81561678|sp|Q5N0T6|RF1_SYNP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361627|sp|Q31L36|RF1_SYNE7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56686862|dbj|BAD80084.1| peptide chain release factor RF-1 [Synechococcus elongatus PCC
           6301]
 gi|81169893|gb|ABB58233.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus
           elongatus PCC 7942]
          Length = 368

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  +  E + + R R  ++  ++  +E + R  +     E+
Sbjct: 10  LQSVEQTFQDLTRRLADPEIATDPREFQRVARMRSSMEELVTTYEEWKQRDAELKGAREI 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +  +  +  ++  +    E  +   L     D  +  LE+ AG GG E+
Sbjct: 70  LRESSGDPELREMAALEVNELEALLVSLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+AE + ++ + L    GE  G K A L I+G + Y  LK E GVHR+
Sbjct: 130 SLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEIQGESVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMPEV-DEVEVSIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++LQ+++E  +    S+   G   
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQEAVSSMRRSQVGTGSRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R  +   S + VL+G++++ ++A ++  +
Sbjct: 309 EKIRTYNYKD-NRATDHRLGL-NFSLNPVLEGEIEEVIQACISKDQ 352


>gi|22297692|ref|NP_680939.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
 gi|32171539|sp|Q8DMG9|RF1_THEEB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22293869|dbj|BAC07701.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
          Length = 364

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 183/347 (52%), Gaps = 17/347 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLEL 75
             Q  + L  +  DP +  N  E + + R R  L+  ++   E Q    +L D   L + 
Sbjct: 13  VEQTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLNQQLVDARQLHKE 72

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  E    + Q   + +  +   +    E  +   L     D  +  LE+ AGAGG E+ 
Sbjct: 73  AANE--PELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEIRAGAGGDEAG 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L+RMY+R+A+ + ++   +     E  G K A L IKG   Y  LK E GVHR+ 
Sbjct: 131 IWAGDLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P V D +E+EI   D  + T R+ GAGGQ+VN  ++AV 
Sbjct: 191 RVPATEASGRIHTSTATVAVMPEV-DEVEVEIDPKDIELTTARSGGAGGQNVNKVETAVD 249

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L  RE+   I    ++++G G  
Sbjct: 250 LYHKPTGIRIFCTEERSQLKNKERAFQILRAKLYEIKL--REQQEAITSMRRSQVGTGDR 307

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D R   +  S S VL+GDL+  ++A ++  +
Sbjct: 308 SEKIRTYNYKD-DRVTDHRLG-QNFSLSSVLEGDLEPIIQACISRDQ 352


>gi|15890803|ref|NP_356475.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
 gi|22096038|sp|Q8U8B8|RF1_AGRT5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15159088|gb|AAK89260.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
          Length = 360

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 176/342 (51%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L+  +  I++ +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELEPVVKKIRDYEKAISEAADLEALL 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  ++  +   + +     L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIATITGRGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I++EI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLPEA-EDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG++V    E+SQH+N+A+A  +LR++LY++E QK +   +    S+   G    
Sbjct: 246 ITHLPTGLIVTSS-EKSQHQNRAKAMQVLRSRLYDIERQKVDSERSADRKSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       V++G++D+ + A +A
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEIDELVDALIA 345


>gi|16125109|ref|NP_419673.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
 gi|13422113|gb|AAK22841.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
          Length = 385

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 179/343 (52%), Gaps = 9/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ +     +   L  +
Sbjct: 37  LDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVM 93

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134
           A + +   ++++    L      +E +    L   + D N  A LEV AG GG E+  +A
Sbjct: 94  ASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAALFA 153

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A+ + ++ E   I +GE  G K     I G   +G LK E GVHR+ R+ 
Sbjct: 154 GDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVP 213

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 214 ATEAQGRIHTSAATVAVLPEA-EDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 272

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTGVVV    E+SQH+N+A+A   L+A+LY+++ +  +   +    S+   G    +IR
Sbjct: 273 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSERIR 331

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +Y   P   V D R N+   + + +++GD LDD +   +A  +
Sbjct: 332 TYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQ 373


>gi|198276935|ref|ZP_03209466.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
 gi|198270460|gb|EDY94730.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
          Length = 369

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 172/352 (48%), Gaps = 16/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP++  +      L +E + L + ++  KE    +        +
Sbjct: 11  LEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELGDLMAARKEYLQCINGLEEAK-M 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + E+D  + +   +     +  +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 70  MMSENDPEMKEMAREEAASCEARIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 IFAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGEKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG+V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 249 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359


>gi|284050702|ref|ZP_06380912.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca]
 gi|291567816|dbj|BAI90088.1| peptide chain release factor 1 [Arthrospira platensis NIES-39]
          Length = 371

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 17/355 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q    L  +  DP +  +  E + + + R  L++ ++  +E +    +   
Sbjct: 6   LLDKLKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQEWKTTQTELAG 65

Query: 72  LLELALE-------EDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHA 123
             ++  E       ++   +     + L     E+E +    LL     D  +  LE+ A
Sbjct: 66  AKQILRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRA 125

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  WA  L+RMY+R+AE + ++   L     +  G K A L I+G   Y  LK 
Sbjct: 126 GTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGDRVYSQLKF 185

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   ++  R HTS +++ + P V D +E++I   D  + T R+ GAGGQ+V
Sbjct: 186 EAGVHRVQRVPVTEAGGRVHTSTATVAIMPEV-DDVEVQIDAKDIEMTTARSGGAGGQNV 244

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++AV + H PTG+ V C +ERSQ KN+ +A  +LRAKLYE +L  RE+   +    +
Sbjct: 245 NKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--REQQDAVTSMRR 302

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++G G    +IR+Y  +    V D R      S + VL+G + D ++A +   +
Sbjct: 303 SQVGTGSRSEKIRTYNYKD-NRVTDHRLG-HNFSLAPVLEGGIGDLIQACVIQDQ 355


>gi|241895238|ref|ZP_04782534.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
 gi|241871544|gb|EER75295.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
          Length = 361

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 177/344 (51%), Gaps = 8/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL----CDNLILL 73
           + V R   ++    DP +  +      L +E   L   +   K  +  +     +  IL 
Sbjct: 10  SVVDRYEEVSEMISDPEVIADTKRFLALSKEEGSLRETVETFKHYKQVVVGIEENEEILR 69

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           E A + +   + +E   +L+  K  +E + +   L     D  +  +E+H  AGG E   
Sbjct: 70  EEANDSELEELAKEELKDLRVEKEALEDQIKILLLPKDPNDDKNIIMEIHGAAGGDEGAL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L  MY R+AEK+ ++ E ++ +  E  G K   L+I G N Y  LK E G HR+ R
Sbjct: 130 FAADLYDMYVRYAEKQGWQVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENGAHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++IEI++ D R+D YR+SGAGGQH+N T SAVR+
Sbjct: 190 VPETESAGRVHTSTATVGVMPE-YEDVDIEIADKDLRVDVYRSSGAGGQHINKTSSAVRM 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQ 311
           TH+PTG+VV  Q +RSQ +N+A+A  +L+A++Y+    + E   A   +++        +
Sbjct: 249 THLPTGIVVAMQDQRSQQQNRAKAMEILKARVYDYYASQNEAEYAEQRKTAVGTGDRSER 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       +++G+L D + A L   +
Sbjct: 309 IRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELSDVIDALLIADQ 351


>gi|15672577|ref|NP_266751.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|13878663|sp|Q9CHX3|RF1_LACLA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12723487|gb|AAK04693.1|AE006292_13 peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406096|gb|ADZ63167.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 357

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   E +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
           +  +L E  L++D   +L+E   + +  K  +E + +   L     D  +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V +  E+ I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEV-EEFEMTIDQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++   Q   +  N    S    
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 300 GDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|312148979|gb|ADQ29050.1| peptide chain release factor 1 [Borrelia burgdorferi N40]
          Length = 357

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 125/345 (36%), Positives = 197/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++   ++  +  K +D +L ++  +   +++E  +L+   +     ++I  ++ D   +
Sbjct: 6   LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQ+KNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQYKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|148238741|ref|YP_001224128.1| peptide chain release factor 1 [Synechococcus sp. WH 7803]
 gi|166223613|sp|A5GIR6|RF1_SYNPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147847280|emb|CAK22831.1| Peptide chain release factor 1 [Synechococcus sp. WH 7803]
          Length = 365

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  ++    +Q    +     EL
Sbjct: 10  LEAARSSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYASLQAVQSEREQAREL 69

Query: 76  ALEE-DDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +       L  +    +  +E      L     D     LE+ AGAGG E+
Sbjct: 70  LRDSRGDEEMAHLAQLELDELDIRHEALIERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R++ +R +  + +   + +  G K   L +KG + +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGESVFSELKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKLYE +L   E  A    + + ++G G 
Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQL--AEANARESSARRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R      S   VL G ++D + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLG-RNFSLDPVLQGQMEDVIGACIAEEQ 352


>gi|312194810|ref|YP_004014871.1| peptide chain release factor 1 [Frankia sp. EuI1c]
 gi|311226146|gb|ADP79001.1| peptide chain release factor 1 [Frankia sp. EuI1c]
          Length = 360

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 119/332 (35%), Positives = 176/332 (53%), Gaps = 13/332 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  DP +  +V EA+ L R    L   +   +EI+    D     EL
Sbjct: 5   LERMLDEHAVIEKRLADPAVHNDVGEARALGRRYAELAPIVELAREIEQANGDLETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A+E  D S   E +D    I+   +  +     +   D  DA LEV AGAGG ES  +A 
Sbjct: 65  AVE--DPSFRAEVTDLETAIQDRRQRLRTLLAPTDPDDGRDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIK--SATLLIKG------PNAYGWLKGEQGV 187
            LLRMY R+AE+R +KTE LE +  +  G +  S  +  +G      P  YG L+ E GV
Sbjct: 123 DLLRMYLRYAERRGWKTEILEANPSDLGGYRDVSVAVKYRGQVPPGQPGVYGRLRFEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P   + ++++I  +D RID +R+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESAGRIHTSAAGVLVMPEA-EEVDVQIDPNDLRIDVFRSSGPGGQSVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L  +  +K E   +   +S+   +
Sbjct: 242 SAVRITHVPTGVVVSCQNEKSQLQNKESALRILRARLLTVAREKAESEKSAARASQVRTM 301

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
               ++R+Y   P   + D R N +  +   V
Sbjct: 302 DRSDKVRTYNF-PENRIADHRVNYKAHNLEAV 332


>gi|253751628|ref|YP_003024769.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|253753530|ref|YP_003026671.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|253755645|ref|YP_003028785.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251815917|emb|CAZ51531.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|251818109|emb|CAZ55903.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251819776|emb|CAR45680.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|319758066|gb|ADV70008.1| peptide chain release factor 1 [Streptococcus suis JS14]
          Length = 359

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNIVDAEEM 66

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L++ K + E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 350


>gi|163739713|ref|ZP_02147121.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
 gi|161386943|gb|EDQ11304.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
          Length = 351

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 177/342 (51%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     ++     L +E   L      I   +  LCD     ++
Sbjct: 7   LEQILQRFQYLEAAMAEGVAGADIA---ALAKEYSDLRPVAEQITAYRRLLCDLEEAEQM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+    E E+  Q   L   EAD+  A LE+  G GG E+  +A
Sbjct: 64  LADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E    E  G+K     +KG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWGFEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I   D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLPEA-EDVDLRIDPGDLRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG++V    E+SQH+N+  A  ++R +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 243 IPTGIIVVSS-EKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRASQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 302 TYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342


>gi|225552361|ref|ZP_03773301.1| peptide chain release factor 1 [Borrelia sp. SV1]
 gi|225371359|gb|EEH00789.1| peptide chain release factor 1 [Borrelia sp. SV1]
          Length = 357

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 127/345 (36%), Positives = 198/345 (57%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  +  K +D +L ++  +   +++E  +L+   +     ++I  ++ D   +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIVKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
           LE   +ED   + +     L  +  + E  + +     L   E DS +  +E+ AG GG 
Sbjct: 66  LE---KEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVH
Sbjct: 123 EAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +SN R  TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDS
Sbjct: 183 RVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G 
Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 300 GDRSERIRTYNF-PQNRITDHRANITLYKLEEFIQGELDPLLDPL 343


>gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d]
          Length = 352

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 175/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L     +  +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|160885362|ref|ZP_02066365.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|237716574|ref|ZP_04547055.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|237720319|ref|ZP_04550800.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|260172304|ref|ZP_05758716.1| peptide chain release factor RF-2 [Bacteroides sp. D2]
 gi|262405351|ref|ZP_06081901.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|293370547|ref|ZP_06617099.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|294644599|ref|ZP_06722352.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294810341|ref|ZP_06769002.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|315920609|ref|ZP_07916849.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108984|gb|EDO10729.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|229442557|gb|EEO48348.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|229450070|gb|EEO55861.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|262356226|gb|EEZ05316.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292634281|gb|EFF52818.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|292640036|gb|EFF58301.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294442449|gb|EFG11255.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|295086344|emb|CBK67867.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           xylanisolvens XB1A]
 gi|313694484|gb|EFS31319.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 319

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 127/315 (40%), Positives = 190/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +   EE      ++      +    VE  + +
Sbjct: 1   MKLVKDLQKWIEGYNELKTLADELELAFDFYKEE--LVTEEDVDAAYAKASEAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           ++   DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 ANISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +D F+KA L 
Sbjct: 298 VMDGKIDGFIKAYLM 312


>gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 [Rhodococcus opacus B4]
 gi|226239092|dbj|BAH49440.1| peptide chain release factor 1 [Rhodococcus opacus B4]
          Length = 359

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 177/342 (51%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+   +    L   ++    ++    D     EL
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDASAARKAGKRFAELAPIMATYTRLKSAQDDLDAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E    L+   LE++    + L      D +D  LEV +G GG ES  +A
Sbjct: 70  AA--DDSSFAAEV-PALEEQVLELDKTLTDLLAPRDPHDGDDVVLEVKSGEGGEESALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
           + L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR
Sbjct: 127 SDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +  
Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R   +  +   VLDG+LD  + A 
Sbjct: 307 SERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDAL 347


>gi|33862085|ref|NP_893646.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|81575585|sp|Q7UZX1|RF1_PROMP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33634303|emb|CAE19988.1| peptide chain release factor RF-1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 364

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 176/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             NA +    L  +  DP +  N  + + + RER  L+  +    ++ D   +     +L
Sbjct: 10  LKNASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGDSKQL 69

Query: 76  ALE----EDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    +D  S++ E   +L+ +K ++ E      L     D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  ++  I T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVKIDPTEIEIGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L  +E  A        ++G G 
Sbjct: 249 DLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLMQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      +   +L G LDD + A LA ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFALEPILAGQLDDVIYACLAQEQ 352


>gi|315222986|ref|ZP_07864865.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
 gi|315187936|gb|EFU21672.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
          Length = 359

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYREYKRVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 SLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQ 350


>gi|76788237|ref|YP_329784.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77405475|ref|ZP_00782567.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
 gi|119361618|sp|Q3K119|RF1_STRA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76563294|gb|ABA45878.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77175872|gb|EAO78649.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
          Length = 359

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDAELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|313889382|ref|ZP_07823030.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313122214|gb|EFR45305.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 359

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E     + ++  ++ ++ +       E+
Sbjct: 7   LQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEASTRDTVTAYRQYKEIIQSIADAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  I +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDSEIEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EDVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIVDALIMYDQ 350


>gi|150002702|ref|YP_001297446.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254882204|ref|ZP_05254914.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294776956|ref|ZP_06742417.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|319643236|ref|ZP_07997864.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
 gi|149931126|gb|ABR37824.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254834997|gb|EET15306.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294449204|gb|EFG17743.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|317385140|gb|EFV66091.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 170/346 (49%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L++ +   +E    L       ++
Sbjct: 12  LDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAKQI 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   +     ++ +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 72  MTNESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + ++ E    ++G   G K     + G   YG LK E GVHR+ 
Sbjct: 132 IFAGDLFRMYSKYCETKGWRLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 192 RVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 250

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG+V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 251 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +      +IR+Y   P   + D R N    + +  +DGD+ D + 
Sbjct: 311 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCID 355


>gi|322517017|ref|ZP_08069906.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
 gi|322124434|gb|EFX95931.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
          Length = 359

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ + +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFDVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350


>gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585217|sp|C4LJM5|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 357

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     L  +  DP L  +   A+ + +    L   I     +     D     E+
Sbjct: 8   VDDIVSEYQGLEAQLADPDLHNDAARARKVGKRFSELQPIIQTNDRLNAVTDDLEAAEEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E     +  +   +            D +D  +EV +GAGG E+  +A 
Sbjct: 68  AHE--DQEFAAEAERLREEKEELSDKLADLLAPRDPHDGDDIVMEVKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L+RMY R+A+K  F  + L+    +  GIK  T+ I+        A+   K E GVHR+
Sbjct: 126 ELVRMYQRYADKHGFAIDVLDDAPTDLGGIKDITMSIRSKKPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  ++EI + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWG 309
           RITH+PTG++V CQ+ERSQ +NKA+A  +L A+L +++ ++ E  A+   +++   +   
Sbjct: 246 RITHLPTGLIVTCQKERSQIQNKARAMQVLAARLQQMKEEEAEAAASADRAAQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N +  +   VLDGDLDD   A  + ++
Sbjct: 306 ERIRTYNF-PENRISDHRINYKAHNLDQVLDGDLDDLFSALQSAER 350


>gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 406

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 129/360 (35%), Positives = 189/360 (52%), Gaps = 14/360 (3%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNAISFIKEIQDR 65
             L           +++ L T+   P  W   N   A ++  +       ++ I+  Q+ 
Sbjct: 36  KNLASTTKLPALQSQIADLETEQSQPDFWDEANTSRAAIVNAQVSTATRLLTRIQAWQEW 95

Query: 66  LCDNLILLE----LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             D    LE    LA EE    +L E    + R++ + +  + E LLSG  D   A L +
Sbjct: 96  HGDAQAALEILSQLASEER-AMLLDEFRSAIARLREDSDRFELELLLSGPYDHAPARLLL 154

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DW   L RMY R  E         +   GE  G KS  LL+ G NAYGWL
Sbjct: 155 TAGAGGTEANDWVGDLKRMYQRHCEAMGLSCVVQDEQAGEAVGYKSVELLVSGDNAYGWL 214

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE------IEISESDCRIDTYRA 235
           +GE+G HR+VR+SP+++N++R T+F+ + V P + +  +      I++ ES+  I T RA
Sbjct: 215 QGEKGAHRMVRLSPFNANNKRQTTFAGVDVAPDILNQDDDAYWNTIDVPESELEITTMRA 274

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  +SAVRI H+P+G+ V+C QERSQ  NK  A   L+A+L  +  ++R   
Sbjct: 275 GGKGGQNVNKVNSAVRIKHLPSGLQVKCAQERSQSMNKNIALKRLKAQLLAIVQEQRVAE 334

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
                    E  WG QIR+YV  PY+MVKD RT  E ++    +DGD L++ + + L  K
Sbjct: 335 IKEIRGDMVEASWGAQIRNYVFHPYKMVKDQRTGWETSNVQAFMDGDLLEECIGSFLRHK 394


>gi|323356873|ref|YP_004223269.1| protein chain release factor A [Microbacterium testaceum StLB037]
 gi|323273244|dbj|BAJ73389.1| protein chain release factor A [Microbacterium testaceum StLB037]
          Length = 368

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/355 (31%), Positives = 172/355 (48%), Gaps = 16/355 (4%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
              + GL D          +  +  DP +  +   AK + R    L+  +   +      
Sbjct: 12  FESVRGLID------EHREIELELNDPAVHADAARAKRVNRRYAELNRIVHAYQAWVSAS 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D     ELA E  D +   E     +R+    E  +   +     D+ D  +E+  G G
Sbjct: 66  DDLEAARELARE--DEAFAAEIPALEERVSETQERLRRLLIPRDPDDARDVIMEIKGGEG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGW 180
           G ES  +A  LLRMY ++A    +KTE LE  + +  G K   + IKG         +  
Sbjct: 124 GAESALFAADLLRMYLQYAASMGWKTELLERTESDLGGYKDVQVAIKGSSSDPAQGVWAH 183

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   +S  R HTS + + V+P VD+  E+ I  +D +ID +R+SG GG
Sbjct: 184 LKYEGGVHRVQRVPATESQGRIHTSTTGVLVFPEVDEPEEVAIDPNDLKIDVFRSSGPGG 243

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA+L   + ++R+ +A    
Sbjct: 244 QSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREAGMRVLRARLLAKQQEERDAVAADAR 303

Query: 301 SSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            S+   +    +IR+Y   P   + D RT  +  +   V+DG L   +++ +   
Sbjct: 304 RSQIRGMDRSERIRTYNF-PENRIADHRTGYKAYNLDQVMDGALGPIIESAITAD 357


>gi|281205221|gb|EFA79414.1| class I peptide chain release factor [Polysphondylium pallidum
           PN500]
          Length = 434

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 138/347 (39%), Positives = 211/347 (60%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + +  QRL  +  + +   +      +  +A+ L +E Q L   I  I+E+Q        
Sbjct: 90  YQDKKQRLVLIENELKSNGVESQLSIDNKKAQTL-KECQRLKRDIEQIEELQSNFMYYEE 148

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +   A +++D S+L E S+ +  +  +    +F+S++SGE D  D YLE+HAGAGG +S 
Sbjct: 149 ISGEAKKKNDQSMLSEMSECISDLYQQSTDLEFKSIMSGENDHEDCYLEIHAGAGGADSM 208

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW+ +L  MY +W++++ FK   ++I  GE  G K A L I+G  AYGW + E GVH+L+
Sbjct: 209 DWSEILSNMYRKWSQRKDFKVTLVDISPGEV-GYKRAILKIEGEFAYGWCRSESGVHKLI 267

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+SP+DS+ +RHTSF+S+  YP VDDSI I++   D  I+T R+SG GGQH N T+SAVR
Sbjct: 268 RLSPFDSSGKRHTSFASVLAYPAVDDSISIDLQTKDLLIETMRSSGPGGQHSNKTESAVR 327

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR 310
           ITH PTG+ V    +RSQH+NK+ A ++L+AK+   E++KR +      S     GW   
Sbjct: 328 ITHTPTGISVAVSDQRSQHQNKSIAMDLLKAKIMASEIKKRAQQEESFRSDLGVNGWASD 387

Query: 311 QI-RSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAIK 354
           +I R+Y + P   VKD RTN+E  +  ++L+G  +LD F+K  L+ K
Sbjct: 388 RIVRTYTMHPQTRVKDQRTNLESLNIDEILEGGDELDIFIKTALSQK 434


>gi|25011160|ref|NP_735555.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76798425|ref|ZP_00780665.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77408667|ref|ZP_00785400.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|77410552|ref|ZP_00786913.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77413289|ref|ZP_00789485.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|32171550|sp|Q8E5C3|RF1_STRA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23095559|emb|CAD46768.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76586220|gb|EAO62738.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77160676|gb|EAO71791.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|77163500|gb|EAO74450.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77172715|gb|EAO75851.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|319745079|gb|EFV97405.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC
           13813]
          Length = 359

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|149204050|ref|ZP_01881018.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
 gi|149142492|gb|EDM30537.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
          Length = 417

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/339 (33%), Positives = 175/339 (51%), Gaps = 10/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+R  ++  +        ++     L RE   L   +  I+  +  + D      +
Sbjct: 76  LQQIVERFDYVEAQMMQGG--GDIAR---LGREYSELRPVVEEIRAYRLAVNDLDGARAM 130

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    E+E   Q   L   EAD+  A LE+  G GG E+  + 
Sbjct: 131 LADPEMRDLAREEVAVLEARLPEMEQRLQLALLPRDEADARPAILEIRPGTGGEEAALFG 190

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+RMY R++E R +  E +E    E  GI+   + I G   +  LK E GVHR+ R+ 
Sbjct: 191 ADLMRMYQRYSEARGWSFEVIEEQQSELGGIRELVVRIGGEGVFARLKFESGVHRVQRVP 250

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I+ +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 251 ETESGGRIHTSAATVAVLPEA-EDVDIQINANDLRIDTMRSSGAGGQHVNTTDSAVRITH 309

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE  + +   +   +++   G    +IR
Sbjct: 310 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERNRVDSERSANRAAQVGSGDRSERIR 368

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       VL GDLD+ + A  A
Sbjct: 369 TYNF-PQGRMTDHRINLTLYKLEQVLGGDLDEVIDALTA 406


>gi|86159138|ref|YP_465923.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775649|gb|ABC82486.1| bacterial peptide chain release factor 2 (bRF-2) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 309

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 154/292 (52%), Positives = 205/292 (70%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +E
Sbjct: 7   AVRRSLDDAQALNELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVE 66

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGW
Sbjct: 67  VKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGW 126

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+D N+RR TSF+++ V P +DD I I+I E+D RIDTYR+SGAGG
Sbjct: 127 LKAERGVHRLVRISPFDQNARRQTSFAAVDVTPEIDDDIVIDIKEADVRIDTYRSSGAGG 186

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VN TDSAVR+TH+PTG+VV  Q ERSQ KN+  AW +LRAKLY+LE +KR    +  E
Sbjct: 187 QKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRNVAWKILRAKLYDLEEKKRAAARDAAE 246

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + K +I +G QIRSYVLQPYQMVKDLRT +E     DVLDGDLD F++  L 
Sbjct: 247 ALKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298


>gi|306829484|ref|ZP_07462674.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307708639|ref|ZP_07645102.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315613125|ref|ZP_07888035.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|322376710|ref|ZP_08051203.1| peptide chain release factor 1 [Streptococcus sp. M334]
 gi|304428570|gb|EFM31660.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307615213|gb|EFN94423.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315314687|gb|EFU62729.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|321282517|gb|EFX59524.1| peptide chain release factor 1 [Streptococcus sp. M334]
          Length = 359

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|217034576|ref|ZP_03439984.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
 gi|216942931|gb|EEC22416.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
          Length = 352

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSILENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|157363244|ref|YP_001470011.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
 gi|157313848|gb|ABV32947.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
          Length = 347

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 113/324 (34%), Positives = 177/324 (54%), Gaps = 9/324 (2%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  K    +L  ++ + +    E   L  A+   ++++    +     E   E  D S+
Sbjct: 18  ELEQKLSSSNL--DIEQLREFSVEYSRLKEALEIYQQLKQVEEEMNFWQEAMKE--DPSL 73

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            ++     ++ +  +       L   E   N+   E+ AG GG E+  +A  L RMY R+
Sbjct: 74  EEDFLKARKQYEDIISQLISHLLPFEEH--NNVIFEIRAGTGGEEAALFAADLYRMYIRY 131

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE++ ++ E  + HD    G K     +KG +AY +LK E GVHR+ R+   +S+ R HT
Sbjct: 132 AERKGWQVELSDFHDTGLGGFKEIVFFVKGKSAYKYLKYESGVHRVQRVPVTESSGRIHT 191

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P V D +EI I   D +IDT++ASG GGQ+VN T+SAVRITH+PTG++V CQ
Sbjct: 192 STATVAVLPEVSD-VEIHIDPKDLKIDTFKASGHGGQYVNKTESAVRITHLPTGIIVSCQ 250

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
            ERSQH+N+ +A  +LRAKLYE+E +K   +++N  ++         +IR+Y   P   V
Sbjct: 251 SERSQHQNRERALVILRAKLYEIEQEKINSQLSNQRKNQIGSAERSEKIRTYNF-PQNRV 309

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFM 347
            D R N       ++LDGDLD+ +
Sbjct: 310 TDHRINYTTYRLQEILDGDLDELI 333


>gi|322385289|ref|ZP_08058934.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
 gi|321270548|gb|EFX53463.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
          Length = 359

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|319939134|ref|ZP_08013498.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
 gi|319812184|gb|EFW08450.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  ++ +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYRDYKRVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 SLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQ 350


>gi|22537235|ref|NP_688086.1| peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
 gi|32171547|sp|Q8DZM4|RF1_STRA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22534102|gb|AAM99958.1|AE014241_9 peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE       ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEASTRETVTAYREYKQVIQNISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|19746088|ref|NP_607224.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS8232]
 gi|24418636|sp|Q8P125|RF1_STRP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19748260|gb|AAL97723.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS8232]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDIILSGKMDEVIDALVMYDQ 350


>gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
          Length = 352

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +EI I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|302346475|ref|YP_003814773.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
 gi|302150829|gb|ADK97090.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
          Length = 370

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 168/353 (47%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  + +   + L   + ++  +E  + + LL      D+ +  +E+  GAGG E+
Sbjct: 71  IANESDAEMKEMAREELSENEALQPALEE-EIKLLLVPKDPEDAKNVQMEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+
Sbjct: 130 ALFAGDLFNMYKRYCDKKGWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYVDDIASRRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           ++G++ D + A    +
Sbjct: 309 LVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAE 360


>gi|223932122|ref|ZP_03624126.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|302023743|ref|ZP_07248954.1| peptide chain release factor 1 [Streptococcus suis 05HAS68]
 gi|330832776|ref|YP_004401601.1| peptide chain release factor 1 [Streptococcus suis ST3]
 gi|223899103|gb|EEF65460.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|329306999|gb|AEB81415.1| peptide chain release factor 1 [Streptococcus suis ST3]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNMVDAEEM 66

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L++ K + E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 350


>gi|332360650|gb|EGJ38459.1| peptide chain release factor RF1 [Streptococcus sanguinis SK49]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1]
 gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1]
          Length = 355

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 171/340 (50%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + L  +     L     E     R+   L+       E++    +   L E+
Sbjct: 8   LDQIANRFAELEARMASGTL--EGEEFVAASRDYAELEPVAKIAGEVKAMREEIEGLEEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E    ++    E E     +LL    AD+  A LE+ AG GG E+  +A
Sbjct: 66  LADPEMKAMAEEELSAIREALPEKERSLAIALLPRDRADAKPAMLEIRAGTGGDEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++A ++ ++ E + +   E  G K     + G   +  LK E GVHR+ R+ 
Sbjct: 126 GDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIVANVSGQGVFAKLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D ++++I   D +IDTYRASGAGGQHVNTTDSA+RITH
Sbjct: 186 VTESGGRIHTSAATVAVLPEP-DEVDVQIDPGDLKIDTYRASGAGGQHVNTTDSAIRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
            PTG+VV CQ  RSQHKN+ +A  +LRA+LYE    + +   A   ++         +IR
Sbjct: 245 EPTGLVVTCQDGRSQHKNREKAMQVLRARLYEKTRDEAQGAEAEARKAMVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
           +Y   P   V D R  +      +VL G  LD+ + A +A
Sbjct: 305 TYNF-PQGRVTDHRIGLTLHKLEEVLAGPGLDELVDALIA 343


>gi|317010358|gb|ADU84105.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7]
          Length = 352

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 175/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++   +  KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVNDIKKLTELSKEQSSIEEISTASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKALEIKKSELEATIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          ++R
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERVR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|322387784|ref|ZP_08061393.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
 gi|321141651|gb|EFX37147.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
          Length = 359

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101]
 gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium
           erythraeum IMS101]
          Length = 288

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 136/276 (49%), Positives = 193/276 (69%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S+L E +  +  +  E++  + + LLSG  D N A + ++AGAGGT++QDWA MLL
Sbjct: 4   ETDESLLAEANLTIANLNQELDQWELQQLLSGLYDQNGAVVTINAGAGGTDAQDWAEMLL 63

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW E+ K+K +  EI +G+EAG+KSATL I G  AYG+LK E+G HRLVRISP+++
Sbjct: 64  RMYTRWGEEHKYKVQLAEISEGDEAGLKSATLEIIGRYAYGYLKAEKGTHRLVRISPFNA 123

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P++D S+E++I E D  I T R+ G GGQ+VN  ++AVR+ HIPTG
Sbjct: 124 NGKRQTSFAGVEVMPILDHSVELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTG 183

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + V+C QERSQ +NK +A  +L+A+L  +  ++R +  N       E  WG QIR+YV  
Sbjct: 184 LSVRCTQERSQLQNKDKALALLKARLLIIAQEQRAQEINEIRGDMVEAAWGNQIRNYVFH 243

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PYQMVKDLRT  E T+ +DV++G+LD F++A L  +
Sbjct: 244 PYQMVKDLRTQKETTAINDVMNGELDQFIEAYLRQE 279


>gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 352

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 180/345 (52%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   L  +        +      L +E   ++  +  ++ ++    D      +
Sbjct: 7   LDKVLYRYDELREQLAA----GDGGSFARLSKEFSDIEPVVHAVQALKKARADMAEAEAM 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E    L+     +E   Q   L   EAD  +A LEV AG GG E+  +A
Sbjct: 63  MADPDMKDLAAEEYYALKETLPGLERDVQLMLLPKDEADEKNAILEVRAGTGGEEAALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A  R ++ E +++++    G+K A+  I G   +  LK E GVHR+ R+ 
Sbjct: 123 AELFRMYERYASVRGWRFEVMDVNETGIGGMKEASATITGRGVFARLKFESGVHRVQRVP 182

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P   + ++I+I + D R D YR+ G+GGQ VNTTDSAVR+TH
Sbjct: 183 ATESGGRIHTSAATVAIMPEA-EEVDIQIDDKDLRFDVYRSQGSGGQSVNTTDSAVRVTH 241

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V CQQE+SQHKNKA A  +LRA+LYE+E     + A    + K+++G G    +
Sbjct: 242 IPTGLAVACQQEKSQHKNKATAMKLLRARLYEMER--ASKAAERAANRKSQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      D+++G  LD+   A +A  +
Sbjct: 300 IRTYNF-PQGRVTDHRINLTLYKIDDMMNGTALDEVADALIAADQ 343


>gi|293399752|ref|ZP_06643898.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306152|gb|EFE47395.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 358

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +      P +  +  E   L RE+  L   +   ++ +  +   L   + 
Sbjct: 8   LEGMVNRYHEITELMMQPDIVSDSRELAKLGREQADLTQVVETYQDYKHSME-ALEEAKE 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L+E+D  I +     ++ ++ ++E      +   +     DS++A +E+   AGG E  
Sbjct: 67  LLKEEDKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE + +K E +E+ D E  G    + ++KG   YG LK E G HR+ 
Sbjct: 127 IFAGDLYRMYSKYAESQGWKIEIVEMDDSEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P + ++ + +I  +D  I+T R+SGAGGQH+N TDSAVR
Sbjct: 187 RVPKTESQGRIHTSTATVLVTPEI-EAEDFDIDMNDLEIETMRSSGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+ V+CQ  RSQH+N+A A   +R+++Y  E  +R+     G   +++IG G  
Sbjct: 246 IVHKPTGITVKCQDGRSQHENRATALMTIRSRVY--EEHQRKLEEEQGMERRSKIGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R          +++G + D + A  +  +
Sbjct: 304 AEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGKMQDLLDALTSADQ 349


>gi|109948016|ref|YP_665244.1| peptide chain release factor 1 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973223|sp|Q17VT1|RF1_HELAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109715237|emb|CAK00245.1| peptide chain release factor RF-1 [Helicobacter acinonychis str.
           Sheeba]
          Length = 352

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/340 (31%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVINDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSELETTIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +EI I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|295688344|ref|YP_003592037.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
 gi|295430247|gb|ADG09419.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
          Length = 356

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 9/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ +     +   L  +
Sbjct: 8   LDQVLDRFREVEARMGAAT---DGTEIVKLSKEHAELKPVAEAVERLAKLSAERAELDVM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134
           A + +   ++++    L      +E      L   + D N  A LEV AG GG E+  +A
Sbjct: 65  AADPEMADMVRDEMAELDEKLPVLERDLALMLAPKDKDENASAILEVRAGTGGDEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A+   ++ E   I +GE  G K     I G   +G LK E GVHR+ R+ 
Sbjct: 125 GDLFRMYQRYAQLHGWRVEIDSISEGEMGGYKEIVASITGDGVFGRLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EI+I ESD RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 185 ATEAQGRIHTSAATVAVLPEA-EDVEIDIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTGVVV    E+SQH+N+A+A   L+A+LY+++ +  +   +    S+   G    +IR
Sbjct: 244 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSERIR 302

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +Y   P   V D R N+   + S +++GD LDD +   +A  +
Sbjct: 303 TYNF-PQGRVTDHRINLTLYNLSRIMEGDALDDVINPLIAEDQ 344


>gi|227548000|ref|ZP_03978049.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079906|gb|EEI17869.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 357

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 183/349 (52%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I+   E+ +   +     E+
Sbjct: 8   VDDYVSEYEGIQAQMGDPDVAGDAEQFRKLSKRYAELQPIINVYNELSEARENYEAAKEM 67

Query: 76  ALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E  D    +E      ++ R++ E+           E D +D  +E+ AGAGG E+  
Sbjct: 68  ASE--DKEFAEEAVRLEGDIARLEEELADL---LAPRDEHDGDDIIMEIKAGAGGEEAAL 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGV 187
           +A  L RMY ++ EK     E L++ + +  G K  T+ +K        A+  LK E GV
Sbjct: 123 FAGDLARMYQKYCEKNGLSWEVLDLAESDLGGAKDMTVAVKSKTPSRDGAWSKLKFEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS + ++V+P  ++   ++I E D RID YR+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESQGRIQTSAAGVYVFPEAEEVASVDIDEKDLRIDVYRSSGKGGQGVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVRITH+PT +VV CQ ERSQ +N+A+A  +L+A+L +LE +K +  A  G +S+   +
Sbjct: 243 SAVRITHLPTNIVVTCQNERSQIQNRARAMQVLQARLDQLEREKADAEAAEGRASQVRTM 302

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R N +  +   VLDG++D+ + A    ++
Sbjct: 303 DRSERIRTYNW-PENRISDHRINYKANNLDSVLDGNMDELISALQKHER 350


>gi|293363656|ref|ZP_06610406.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
 gi|292552763|gb|EFF41523.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
          Length = 354

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   +   +     +P +  ++ +   L +E   ++  +    +  +   +     E+
Sbjct: 5   LLSIKSKYEEMQQNLANPDVISDIKKYTKLNKELNSIEEIVVSFNKYLNAEENLKNAKEM 64

Query: 76  ALEEDDCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  +++    E S+N + +       +   L   E DS +  +E+   AGG E+ 
Sbjct: 65  -LAEKDSELVELAKIEISENEEIMTKLGAELKILILPKDENDSKNVIVEIRGAAGGDEAN 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY +W+++   + + L+    E  G    T  + G   Y  LK E GVHR+ 
Sbjct: 124 IFAGDLFRMYQKWSDQNDMRLKVLDETRAEAGGFTLITFTVTGEKPYSKLKFESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P +DD IEIE+   D R+D +R+SG GGQ VNTTDSAVR
Sbjct: 184 RIPVTETKGRVHTSTATVTVMPEIDDDIEIEVKPEDIRVDVFRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH  TG+VV CQ+ +SQ +NK  A  +L++KLY+LEL+K++E  +             +
Sbjct: 244 LTHNATGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKKQEEESGYRKLAGLGFRSEK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R +   +  S V++G ++  + + L  ++
Sbjct: 304 IRTYNY-PQDRVTDHRISYSTS-LSPVMEGKVNSIIDSLLTAEQ 345


>gi|170077656|ref|YP_001734294.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
 gi|238689045|sp|B1XJH8|RF1_SYNP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169885325|gb|ACA99038.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
          Length = 363

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 183/350 (52%), Gaps = 10/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q    +  +  DP +  N  E + + + R  L+  ++   + ++   +   
Sbjct: 6   LLDKLKSVEQTFQEMTRRLADPDIATNPDELQRVAKIRSSLEETVNTFNQWKEAQEELRG 65

Query: 72  LLELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
             E+  E   D  + +  +  ++ ++  ++  +       L     D  +  LE+ AG G
Sbjct: 66  AKEILKESAGDPEMKEMAALEVEELENTIDTLENRLKILLLPKDPNDEKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  LLRMY+R+AE + ++ + L     +  G K+  L I+G   Y  LK E G
Sbjct: 126 GDEASIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEIQGEQVYSKLKYEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS ++I V P V D +E+EI   D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPVTEAGGRVHTSTATIAVMPEV-DDVEVEIDPKDIEMTTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AV + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE+ELQ+++E  +    S+   
Sbjct: 245 ETAVDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEEVSSMRKSQVGT 304

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y  +    V D R   +  S +  L+GD++D ++A ++  +
Sbjct: 305 GARSEKIRTYNYKD-NRVTDHRLG-QNFSLAPALEGDIEDMLQACISQDQ 352


>gi|227832889|ref|YP_002834596.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262182622|ref|ZP_06042043.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790875|sp|C3PFQ4|RF1_CORA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|227453905|gb|ACP32658.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 358

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     +  +  DP +  +  + + L +    L   ++  +E+     D     E+
Sbjct: 8   VDDIISEYQGIEMQMADPEVAGDQSQFRKLSKRYAELRPIVAVNEELVQARQDLADAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ +    Q   D L+ + +++E +  + L    E DS D  +E+ AGAGG E+  +A
Sbjct: 68  AYEDHE---FQSEVDRLEPLVVQLEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+A+K  F+ E L +++ +  G+K  ++  K        A+   K E GVHR
Sbjct: 125 GDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRIQTSAAGVLVYPEPEEIDSVNIDDKDIRVDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           VRITH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A     S    +  
Sbjct: 245 VRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDGD+ D ++A  A ++
Sbjct: 305 SERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMQDLIEALQAQER 350


>gi|317181378|dbj|BAJ59162.1| peptide chain release factor 1 [Helicobacter pylori F57]
 gi|332672916|gb|AEE69733.1| peptide chain release factor RF1 [Helicobacter pylori 83]
          Length = 352

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 5/338 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL  
Sbjct: 10  SILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  +   
Sbjct: 70  DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+   
Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P
Sbjct: 190 ESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSY 315
           T + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR+Y
Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
              P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 309 NY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|282859526|ref|ZP_06268631.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
 gi|282587754|gb|EFB92954.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
          Length = 370

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 99/358 (27%), Positives = 169/358 (47%), Gaps = 18/358 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D  D    R   ++T   DP +  +      L RE + L + +   K     L    
Sbjct: 6   SILDKLDGLEARFEEVSTLITDPDVIGDQARYVKLTREYKDLGDIMDARKRYIACLSTIK 65

Query: 71  ILLELALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGA 125
              ++   E D  + +   + L   + ++ ++E  + + LL      D+ +  +EV AG 
Sbjct: 66  EAKDILANESDPDMKEMAREELSENETLQPKLEE-EIKILLVPKDPEDAKNVQMEVRAGT 124

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  +  MY R+ +K+ +     ++++G   G K     + G   YG LK E 
Sbjct: 125 GGDEAALFAGDIFNMYKRFCDKKGWTLSVTDVNEGAVGGFKEIDFAVSGDGVYGILKYES 184

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   D+  R  TS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN 
Sbjct: 185 GVHRVQRVPSTDTQGRMQTSAATVAVLPEA-DRFEVNINEGDIKWDTFRSSGAGGQNVNK 243

Query: 246 TDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIA 296
            +S VR+ +      TG V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA
Sbjct: 244 VESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIA 303

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           N  +S  +      +IR+Y   P   V D R           ++G++ + + A    +
Sbjct: 304 NRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLPGFMNGNIQEMIDALTVAE 360


>gi|300775397|ref|ZP_07085259.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
 gi|300506137|gb|EFK37273.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
          Length = 361

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 91/344 (26%), Positives = 170/344 (49%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +      L +E   L   +    + +  L       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVYDQYKGALDSIAESEEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +  D  ++    +     + ++    ++ + LL     AD  +  +E+ AG GG E+ 
Sbjct: 69  IADGSDRDLVDLAKEEKLEAQAKIPGLEEELKVLLIPKDPADDKNVIVELRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + + + ++ E  + ++    G K   + ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDIYRMYTMYFKAKGWRHEVTDSNEA-AKGYKELIMKVEGEGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLPEA-EEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH P+G+VV CQQ RSQ  N+  A  MLRAKLY+++LQ+ + +IA   ++  +      
Sbjct: 247 LTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVQGDIAAQRKTMVSTGDRSA 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I++Y   P   V D R N    +    ++GD+ + + A +  +
Sbjct: 307 KIKTYNY-PQGRVTDHRINKSMYNLDAYMNGDISEMIDAVIMAE 349


>gi|148984974|ref|ZP_01818217.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
 gi|147922672|gb|EDK73789.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
          Length = 354

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|332827204|gb|EGJ99978.1| hypothetical protein HMPREF9455_03672 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 318

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 134/315 (42%), Positives = 199/315 (63%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I   +E++    +  +  +   E       +E     +     VE  + +
Sbjct: 1   MKIIRGLKGWIEGYEEVKGAAEELQLAFDFQKEGVTSE--EEVDAAYENAVKLVENLELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L+V++GAGGTE QDWA+ML RMY RW + R +KT      DG+EAGI
Sbjct: 59  NMLRREEDKLGAVLKVNSGAGGTEGQDWASMLFRMYQRWCDARGYKTTITHWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL ++G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IEIE+++
Sbjct: 119 KTATLQVEGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVYVVPLVDDTIEIEVNQ 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           SD   DT+R+SGAGGQ+VN  ++ VR+ +      TG    +V++  + RSQ  NK  A 
Sbjct: 179 SDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDNAI 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +L+++LYE+EL++R    +  E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLKSQLYEMELERRSREQSKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGDLDDF+KA L 
Sbjct: 298 VMDGDLDDFIKAYLM 312


>gi|281491061|ref|YP_003353041.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           KF147]
 gi|281374819|gb|ADA64339.1| Peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           lactis KF147]
          Length = 357

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   + +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLCDKVATYNDYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
           +  +L E  L++D   +L+E   + +  K  +E + +   L     D  +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V +  E+ I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEV-EEFEMTIDQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++   Q   +  N    S    
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 300 GDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|254431314|ref|ZP_05045017.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
 gi|197625767|gb|EDY38326.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
          Length = 365

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A +    L  +  DP +  N  + + + RER  L+  +   +++Q  L +      L
Sbjct: 10  LEAARRTFETLERQLADPAVASNPDQLQAIARERARLEPLVLDQRQLQKLLAEEADARTL 69

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D ++ +  S+ L+++   +   +       L     D     LE+ AGAGG E+
Sbjct: 70  LRDHRGDRAMEELASEELKQLAERIHSLRTSLTIALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+   ++ E +   + E  G K   L I+G   +  LK E GVHR+
Sbjct: 130 AIWAGDLARMYERYAQSVGWRVEPVSASEAELGGYKELILSIRGEGVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVQIEPGDVEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKLYE +L   E  A    +   ++G G 
Sbjct: 249 DLLHKPSGIRVFCTQERSQMQNRERAMEILRAKLYERQL--AEANARERSARLAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   VL+G L D + A +A  +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLG-RNFSLEPVLNGQLQDVIGACIAADQ 352


>gi|322379189|ref|ZP_08053581.1| peptide chain release factor 1 [Helicobacter suis HS1]
 gi|322379995|ref|ZP_08054263.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321147584|gb|EFX42216.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321148391|gb|EFX42899.1| peptide chain release factor 1 [Helicobacter suis HS1]
          Length = 352

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 175/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   L      P +  +V     L +E+  L+      K     L        L
Sbjct: 6   LKEVVARYDALALCLTQPEVLNDVKRLTELSKEQASLEELAQAAKRYLKILDQIQENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E   +L+     + ++ +   +     DS + YLE+ AG GG E+  + 
Sbjct: 66  LEDKELGELAKEELKSLEEQSKNLGDHIKILLIPKDPNDSKNIYLELRAGTGGDEAGIFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L R Y R+A+ +++K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 126 GDLFRTYCRYADLKRWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +EI I+ SD RI+ +RA G GGQ VNTTDSAVRITH
Sbjct: 186 ETESQGRIHTSAITVAIMPEA-DDVEININPSDLRIEVFRAGGHGGQCVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V  Q E+SQHKN+ +A  +L+A+LYE +++++++  +     K ++G G    +
Sbjct: 245 IPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQAHSA--ERKMQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           IR+Y   P   + D R N+   S  +++  G+LD  ++  +A
Sbjct: 303 IRTYNY-PQNRLSDHRINLTLYSLEELMLSGNLDPVIEPLIA 343


>gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30]
          Length = 352

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 5/338 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL  
Sbjct: 10  SILKRYDELTALLSSTEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  +   
Sbjct: 70  DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+   
Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSKLKFEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P
Sbjct: 190 ESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSY 315
           T + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR+Y
Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
              P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 309 NY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|187918069|ref|YP_001883632.1| peptide chain release factor 1 [Borrelia hermsii DAH]
 gi|238689283|sp|B2RZQ6|RF1_BORHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119860917|gb|AAX16712.1| bacterial peptide chain release factor 1 [Borrelia hermsii DAH]
          Length = 357

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 132/341 (38%), Positives = 199/341 (58%), Gaps = 8/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              ++  L  K +D +L +N  E    ++E  +L+   +   E ++ L       ++  E
Sbjct: 9   IESKIKILEEKLQDINLVKNQKEYAKTVKEYNYLEKIKAKKDEYENILSQINENQKILSE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E++  + +     L  + L+ +  +       L   E DS +  +E+ AG GG E+  +A
Sbjct: 69  EENLEMKELVKQELAHLNLKKDEVEHMIKILLLHQDENDSKNIIIEIRAGTGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG + +  LK E GVHR+ R+ 
Sbjct: 129 HNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +SN R  TS +++ V P V+D+ +IEI+E D RID YR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 ITESNGRLQTSAATVAVLPEVEDT-DIEINEKDLRIDVYRSSGAGGQHVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E L+K+E+ +N  +          +IR
Sbjct: 248 LPTGIVVQCQNERSQHKNKDQAMKILRARLYEFENLKKQEQRSNDRKQQVGSGDRSERIR 307

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R NI      +++ G+LD  +  TLA+K
Sbjct: 308 TYNF-PQNRVTDHRANISLYKLEEIMQGELDFLLD-TLALK 346


>gi|307704777|ref|ZP_07641673.1| peptide chain release factor 1 [Streptococcus mitis SK597]
 gi|307621686|gb|EFO00727.1| peptide chain release factor 1 [Streptococcus mitis SK597]
          Length = 359

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSSRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|332366923|gb|EGJ44664.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1059]
          Length = 359

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|53712203|ref|YP_098195.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60680383|ref|YP_210527.1| peptide chain release factor 1 [Bacteroides fragilis NCTC 9343]
 gi|253563758|ref|ZP_04841215.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|265765536|ref|ZP_06093811.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|61214601|sp|Q64XW5|RF1_BACFR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81316547|sp|Q5LH11|RF1_BACFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52215068|dbj|BAD47661.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60491817|emb|CAH06575.1| putative peptide chain release factor 1 [Bacteroides fragilis NCTC
           9343]
 gi|251947534|gb|EES87816.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|263254920|gb|EEZ26354.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|301161917|emb|CBW21461.1| putative peptide chain release factor 1 [Bacteroides fragilis 638R]
          Length = 370

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 168/352 (47%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +     ++
Sbjct: 11  LDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLANIEEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 71  LSNESDADMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ + +      +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAE 360


>gi|157414134|ref|YP_001485000.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9215]
 gi|238686831|sp|A8G733|RF1_PROM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157388709|gb|ABV51414.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9215]
          Length = 364

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 175/341 (51%), Gaps = 13/341 (3%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---- 78
              L  +  DP +  +  + + + RER  L+  +    ++ D   +      L  E    
Sbjct: 17  FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANML 137
           ++  S++ E    L+  K E+  K   +LL     D     LE+ AGAGG+E+  WA  L
Sbjct: 77  KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGSEACIWAGDL 136

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+ +K  +  +++   + +  G K   + +KG + Y  LK E GVHR+ R+   +
Sbjct: 137 ARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+ + H PT
Sbjct: 197 SQGRVHTSTATVAVMPEA-DPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPT 255

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V C QERSQ +N+ +A  +LRAKLYE++L  +E  A       +++G G    +IR+
Sbjct: 256 GIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLSQVGTGDRSEKIRT 313

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 314 YNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352


>gi|311086167|gb|ADP66249.1| peptide chain release factor 2 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 133/247 (53%), Positives = 184/247 (74%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S + D  D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIK
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S+T+ + G  A+GW + E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ S
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++++K++E     E +K++I WG QIRSY+L     +KDLRT +EK     VLDGDLDDF
Sbjct: 181 IQMRKKQEEKQKIEQNKSDITWGNQIRSYIL-DNSKIKDLRTGVEKNHVQSVLDGDLDDF 239

Query: 347 MKATLAI 353
           ++ +L +
Sbjct: 240 IEQSLIM 246


>gi|306818471|ref|ZP_07452194.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
 gi|304648644|gb|EFM45946.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
          Length = 366

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 174/345 (50%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++  + +  +  DP L  +   A+ + R    L    +  +   +   D     E+
Sbjct: 11  VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ D          LQ     V+    E L      D+ D  +E+ AG GG ES  +A
Sbjct: 71  AAEDPD---FAAELPKLQEAFYTVQAALIEILTPRDPDDARDVIMEIKAGEGGEESALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGV 187
             L+RMY  +AEK  +  + L + + +  G+K A +  K           +  LK E GV
Sbjct: 128 GDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKYEGGV 187

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTD
Sbjct: 188 HRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTD 247

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVRITHIPTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   +
Sbjct: 248 SAVRITHIPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQVRTV 307

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   + D RT  +  +   VL+G+L   +++ +
Sbjct: 308 DRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAI 351


>gi|254446350|ref|ZP_05059826.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
 gi|198260658|gb|EDY84966.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
          Length = 408

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 179/339 (52%), Gaps = 16/339 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
             R+  ++     P  + +   +  L RE+  L   I     +   + +L +N  +L+ +
Sbjct: 55  KARVEEIDGLMSAPDFYSDARRSAALSREQIKLRQLIEDYDALDKAKQQLAENQEMLDDS 114

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQD 132
               D  + +     +  ++ +VE  + + L       E DS +  +E+ AGAGG E+  
Sbjct: 115 --SGDAELKELAEMEIPELEEKVEKLEEKILKAMIPPDETDSRNTIVEIRAGAGGDEASL 172

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR AE++ ++ E +   +    G K     I G   Y  LK E GVHR+ R
Sbjct: 173 FAADLYRMYTRLAERKGWRVEQMSASESGIDGFKEVIFSITGEEVYKKLKLESGVHRVQR 232

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + +++EI+  D  + T RASGAGGQHVNTTDSA+ I
Sbjct: 233 VPETESQGRIHTSTATVAVLPEA-EEVDVEINPQDLEVTTCRASGAGGQHVNTTDSAINI 291

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+ V C  ERSQ KN+A+A  +L +++  L++++ EE +   E+ K ++G G   
Sbjct: 292 VHKPTGITVYCADERSQIKNRAKAMKVLYSRI--LQVKQEEERSKYAENRKKQVGTGDRS 349

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   + D R  +   S   V+DGD+++ ++
Sbjct: 350 ERIRTYNF-PQSRLTDHRIGLTLHSLPAVMDGDMEEILE 387


>gi|319428670|gb|ADV56693.1| peptide chain release factor [Phaseolus vulgaris]
          Length = 498

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 174/328 (53%), Gaps = 13/328 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQE 87
           K  DP +  +  E + L +    LD  +S  ++ +D          LA +  +D  +++ 
Sbjct: 138 KLADPDVVSDPKEYQKLAQSVAELDEVVSIYRKFKDCEKHLEEAKALAKDGGNDEDMVEM 197

Query: 88  TSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            S  +  +  ++   +       L S   D+ +  +EV AG GG E+  WA  L+RMY R
Sbjct: 198 ISFEIDLLSKQLAELEDNLKVLLLPSDPLDARNIMIEVRAGTGGDEAGIWAGDLVRMYER 257

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           ++E+  +K   +     E+ G K+  + IKG   Y  LK E GVHR+ R+   ++  R H
Sbjct: 258 YSERNSWKYSLVSSSAAEKGGFKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTEAQGRVH 317

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++A+ + H PTG+ + C
Sbjct: 318 TSTATVAIMPEV-DEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFC 376

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
            +ER+Q KNK +A+ +LRAKLYE++L  RE+  ++    K+++G G    +IR+Y  +  
Sbjct: 377 TEERTQLKNKNRAFQLLRAKLYEIKL--REQQESLRNQRKSQVGTGARAEKIRTYNYKD- 433

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             V D R        +  LDGD++D ++
Sbjct: 434 NRVTDHRLK-TNYELTSFLDGDIEDAVQ 460


>gi|227875209|ref|ZP_03993351.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269978100|ref|ZP_06185050.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307700819|ref|ZP_07637844.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
 gi|227844114|gb|EEJ54281.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269933609|gb|EEZ90193.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307613814|gb|EFN93058.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
          Length = 366

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 178/348 (51%), Gaps = 19/348 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++  + +  +  DP L  +   A+ + R    L    +  +   +   D     E+
Sbjct: 11  VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70

Query: 76  ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E+ D +     LQE  D +Q   +E+             D+ D  +E+ AG GG ES 
Sbjct: 71  AAEDPDFAAELPKLQEAFDTVQAALIEILT------PRDPDDARDVIMEIKAGEGGEESA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGE 184
            +A  L+RMY  +AEK  +  + L + + +  G+K A +  K           +  LK E
Sbjct: 125 LFAGDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKYE 184

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VN
Sbjct: 185 GGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVN 244

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303
           TTDSAVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+ 
Sbjct: 245 TTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQV 304

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +    +IR+Y   P   + D RT  +  +   VL+G+L   +++ +
Sbjct: 305 RTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAI 351


>gi|94676864|ref|YP_588739.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|119361509|sp|Q1LTH5|RF1_BAUCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94220014|gb|ABF14173.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 366

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 7/339 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R   + T   +  + ++    ++L +E   L +  +  +  Q    +  I   +  +
Sbjct: 12  LQERYYEVETLLGNSEVAKDRERLRILSKEYAQLTDIHTCFQHWQQVQENISITGPMLED 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL-----SGEADSNDAYLEVHAGAGGTESQDW 133
            +   ++Q+  + L  +   +E +    LL         D    ++EV AG GG E+  +
Sbjct: 72  PEMHDMVQDELNKLHSLLSTLEQQLLTLLLQKDSNKDPNDERGCFIEVRAGTGGDEAALF 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY+R+AE   ++ + +    G   G K   + +   NAYG LK E G HR+ RI
Sbjct: 132 AGDLFRMYSRYAEIHSWQIDVISASSGPHGGYKEIIVKMSHDNAYGQLKFESGGHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P +  +   EIS  D R+DT+R+SGAGGQHVNTT+SA+RIT
Sbjct: 192 PETESQGRIHTSSCTVAVIPDILHAELPEISPEDIRVDTFRSSGAGGQHVNTTESAIRIT 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTG+VV+CQ ERSQHKNKA+A  +L A+L   E Q R++  +    +    G    +I
Sbjct: 252 HLPTGLVVECQDERSQHKNKAKAMAVLSARLRAAEAQCRQQEESCMRRNLLGSGYRSDRI 311

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   + D R        ++V++G L+  ++  +
Sbjct: 312 RTYNF-PQGRITDHRIGFTTYRLNEVIEGKLEILLQPII 349


>gi|312115445|ref|YP_004013041.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220574|gb|ADP71942.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 361

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 113/327 (34%), Positives = 178/327 (54%), Gaps = 14/327 (4%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIK 96
           +    K L +E   LD  ++ IK ++    +   L ++  +   +  + +   + L+  +
Sbjct: 28  DQETFKKLSKEFSDLDPLVAAIKTLEAAEEERDSLRQMIEDPAAEPDMAELAREELEAAE 87

Query: 97  LEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             VE  + E     L    AD   A LEV AG GG E+  +A  L RMY R+A+ + +K 
Sbjct: 88  PRVEQLEHELQIMLLPKDAADEKSAILEVRAGTGGEEAALFAADLFRMYQRYADLKGWKV 147

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             L + D +  G +     I G   +  +K E GVHR+ R+   ++  R HTS +++ V 
Sbjct: 148 NVLSVSDADAGGFREIVASISGKGVFARMKFESGVHRVQRVPETENQGRIHTSAATVAVL 207

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P   + +++EI E D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V    E+SQH+N
Sbjct: 208 PEA-EEVDVEIREQDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIIVTSS-EKSQHQN 265

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTN 329
           +A+A  +LRA+L+++E  + +E        K +IG G    +IR+Y   P   V D R N
Sbjct: 266 RARAMQVLRARLFDMERTRIDEA--RAAERKDQIGSGDRSQRIRTYNF-PQGRVTDHRVN 322

Query: 330 IEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +   +   +++G+ LD  + A +  ++
Sbjct: 323 VTLYNLPQIMEGEGLDTIIDALITERQ 349


>gi|261837535|gb|ACX97301.1| peptide chain release factor RF-1 [Helicobacter pylori 51]
          Length = 352

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 5/338 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL  
Sbjct: 10  SILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  +   
Sbjct: 70  DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+   
Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P
Sbjct: 190 ESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSY 315
           T + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR+Y
Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIRTY 308

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
              P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 309 NY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|237721316|ref|ZP_04551797.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
 gi|229449112|gb|EEO54903.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
          Length = 370

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 169/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R    +T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEETSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +    E  +   + +   DS +A LE+  GAGG E+ 
Sbjct: 71  LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +        I   ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|224373415|ref|YP_002607787.1| peptide chain release factor 1 [Nautilia profundicola AmH]
 gi|254790893|sp|B9L5Z9|RF1_NAUPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|223590043|gb|ACM93779.1| peptide chain release factor 1 [Nautilia profundicola AmH]
          Length = 355

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 180/339 (53%), Gaps = 11/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V++ + +N     P + Q++     L RE + L+  +   KE ++ +        + L++
Sbjct: 10  VEKYNEINQMLSSPEITQDIKRMTKLSREARSLEPIVEKAKEYENIINTIEEAK-MMLDD 68

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANML 137
            + + L +        KL    ++ + LL      D  + +LE+ AG GG E+  +   L
Sbjct: 69  PEMAELAKEELKEAEEKLPELEEEIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFVGDL 128

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           L+ Y R+A+ + +K E +     +  G K   LLIKG + Y  LK E G HR+ RI   +
Sbjct: 129 LKAYLRYADNKGWKVEIVSESKSDAGGYKEIILLIKGESVYSRLKYEGGTHRVQRIPATE 188

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ + P V D ++IE+   D +I+  RA GAGGQHVN T+SAVR+THIPT
Sbjct: 189 SQGRIHTSAVTVAIMPEV-DDVDIELDPKDIKIEVMRAGGAGGQHVNKTESAVRMTHIPT 247

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V  Q ERSQ +NK +A  +L+A+++  E  + E +A IGE+ K+++G G    +IR+
Sbjct: 248 GITVSMQDERSQQRNKEKAMQILKARVF--EKLENERLAAIGEARKSQVGSGDRSERIRT 305

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           Y   P   + D R  +       ++ +G  D+ +   +A
Sbjct: 306 YNY-PQNRITDHRIGLTLYRLEQIMSEGLFDEIIDPLIA 343


>gi|188995108|ref|YP_001929360.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594788|dbj|BAG33763.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
          Length = 319

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 132/315 (41%), Positives = 199/315 (63%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+ + L + I +   I     +  +  E   E    S  +E  +        +E  + +
Sbjct: 1   MRKVKELKSWIGYYDAIDTATEEVKLAYEYCKEG--ISTEEEVDEAYAHAIRLIEEVELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L+V+AGAGGTESQDWA+ML+RMY RWA+K+ ++       DG+EAGI
Sbjct: 59  NMLRSEEDHFGAVLKVNAGAGGTESQDWASMLVRMYQRWADKQGYQVTITNWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ ++G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIEIEI+ 
Sbjct: 119 KTVTMQVEGNLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEIEINA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  ++ VR+ +      TG    +V++  + R+Q+ N+  A 
Sbjct: 179 AGISWDTFRSGGAGGQNVNKVETGVRLHYKYKDPETGEDKEIVIENTESRTQYDNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +LR++LYE+ELQ+R       E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLRSQLYEMELQRRRAAEAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGD+D+F+KA L 
Sbjct: 298 VMDGDIDEFIKAYLM 312


>gi|255007722|ref|ZP_05279848.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313145421|ref|ZP_07807614.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313134188|gb|EFR51548.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
          Length = 370

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 168/352 (47%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +     ++
Sbjct: 11  LDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYMQLLANIEEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 71  LSNESDTDMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ + +      +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAE 360


>gi|323351595|ref|ZP_08087249.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|322122081|gb|EFX93807.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|324992933|gb|EGC24853.1| peptide chain release factor RF1 [Streptococcus sanguinis SK405]
 gi|325687437|gb|EGD29458.1| peptide chain release factor RF1 [Streptococcus sanguinis SK72]
 gi|325694524|gb|EGD36433.1| peptide chain release factor RF1 [Streptococcus sanguinis SK150]
 gi|325696481|gb|EGD38371.1| peptide chain release factor RF1 [Streptococcus sanguinis SK160]
 gi|327462229|gb|EGF08556.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1]
 gi|327470059|gb|EGF15523.1| peptide chain release factor RF1 [Streptococcus sanguinis SK330]
 gi|327474249|gb|EGF19656.1| peptide chain release factor RF1 [Streptococcus sanguinis SK408]
 gi|327489584|gb|EGF21376.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1058]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|255693621|ref|ZP_05417296.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
 gi|260620597|gb|EEX43468.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
          Length = 370

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 174/352 (49%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDN--LQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
              E D  I +   +   L + +L V  ++ + +L  +   DS +A LE+  GAGG E+ 
Sbjct: 71  LATESDTDIREMAKEEMDLSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKYCEVKGWKLEVSNANEGTAGGYKEIVCSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++ I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EEFDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYIWKNPNTGVSEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
 gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 119/335 (35%), Positives = 176/335 (52%), Gaps = 11/335 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  +  DP L  +   A+ + R    +   ++  ++++    D     EL
Sbjct: 10  IEALLAEHADLERQLADPALHADAGAARKVGRRFAQVSPIVACYRKLEAARGDLEAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E  + L     E++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 70  AA--DDASFADEV-EELTAKVAELDNQLTDLLAPRDPHDADDIVLEVKSGEGGEESALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L+    +  G K ATL I          +  LK E GVHR
Sbjct: 127 ADLARMYIRYAERHGWTVTLLDETTSDLGGYKDATLSIRSRGDSADGVWARLKFEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRVHTSAAGVLVYPEPEEVEEVQIDESDLRIDVYRSSGKGGQGVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++ E  A+   +S+   +  
Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEADASADRASQIRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             +IR+Y   P   + D R N +  +   VLDGD+
Sbjct: 307 SERIRTYNF-PENRIADHRINFKAHNLDQVLDGDM 340


>gi|298491428|ref|YP_003721605.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
 gi|298233346|gb|ADI64482.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
          Length = 364

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 181/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP   +N  E + + + R  L+  ++  +  +    + +   ++
Sbjct: 10  LQSVEQTFHELTRRLADPDTAKNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELVGARQV 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E + D  + +  +  ++ ++ ++E      +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNSDPELQEMAALEVKELEEKLEYLESRLKVLLLPCDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + +K + +    GE  G K   L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWKVKLVSQSLGEMGGFKEVILEIQGDRVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS ++I + P V D +EI I   D  + T R+ GAGGQ+VN  ++A 
Sbjct: 190 QRVPATESGGRVHTSTATIAIMPEV-DDVEIHIDPKDIEMSTARSGGAGGQNVNKVETAA 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L  RE+   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKL--REQQEAVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R      + + VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKDS-RVTDHRLG-NNFTLNPVLEGDLETIVQSCISQYQ 352


>gi|203284116|ref|YP_002221856.1| peptide chain release factor A [Borrelia duttonii Ly]
 gi|201083559|gb|ACH93150.1| peptide chain release factor A [Borrelia duttonii Ly]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 130/341 (38%), Positives = 195/341 (57%), Gaps = 8/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              ++  L  K +D +L +N  E   +++E  +L+       E Q  L       ++  E
Sbjct: 11  IESKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILNQINENQKILSE 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ED+  +       +  +  + +  +       L   E D  +  +E+ AG GG E+  +A
Sbjct: 71  EDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEEAALFA 130

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG + +  LK E GVHR+ RI 
Sbjct: 131 HNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVHRVQRIP 190

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +SN +  TS +++ V P V+D+ +IEI++ D RID YR+SGAGGQHVNTTDSAVRITH
Sbjct: 191 ITESNGKLQTSAATVAVLPEVEDT-DIEINDKDLRIDVYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+V QCQ ERSQHKNK QA  +LRA+LYELE L+K+E+ +N  +          +IR
Sbjct: 250 LPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQEQRSNDRKQQVGSGDRSERIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R NI      +++ G+LD  +  TLA+K
Sbjct: 310 TYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLN-TLALK 348


>gi|254526537|ref|ZP_05138589.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537961|gb|EEE40414.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
          Length = 364

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 174/341 (51%), Gaps = 13/341 (3%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---- 78
              L  +  DP +  +  + + + RER  L+  +    ++ D   +      L  E    
Sbjct: 17  FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANML 137
           ++  S++ E    L+  K E+  K   +LL     D     LE+ AGAGG E+  WA  L
Sbjct: 77  KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGDL 136

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+ +K  +  +++   + +  G K   + +KG + Y  LK E GVHR+ R+   +
Sbjct: 137 ARMYERYGQKIGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+ + H PT
Sbjct: 197 SQGRVHTSTATVAVMPEA-DPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPT 255

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V C QERSQ +N+ +A  +LRAKLYE++L  +E  A       +++G G    +IR+
Sbjct: 256 GIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLSQVGTGDRSEKIRT 313

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 314 YNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352


>gi|332360425|gb|EGJ38236.1| peptide chain release factor RF1 [Streptococcus sanguinis SK355]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVAAYREYKKVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKNAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|217977729|ref|YP_002361876.1| peptide chain release factor 1 [Methylocella silvestris BL2]
 gi|254790890|sp|B8EI32|RF1_METSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217503105|gb|ACK50514.1| peptide chain release factor 1 [Methylocella silvestris BL2]
          Length = 360

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 175/342 (51%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   ++ +  +            L RE   L+   + I++ + ++ +   L  +
Sbjct: 7   LDLILRRYDEVSARLNE---AVEPALYVQLSREFAGLEQVAAAIRDYRSQMQEVEGLAAM 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L+  K  +E  + +     L    AD   A LEV AG GG E+
Sbjct: 64  LADPTTDSEMRGLAEEELRDAKERLEALEHQLKIALLPKDAADERSAILEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE + +  E +  ++G   G K     I G   +  LK E G HR+
Sbjct: 124 ALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIAEIAGRGVFAKLKFESGAHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++EI+E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTETQGRIHTSAATVAVLPEAQE-VDVEINEADLKIDTMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG +V  Q ERSQHKN+A+A  +LR+++Y+ + QK +        S+   G   
Sbjct: 243 RITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQKLDAERAADRRSQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+       V+ G+ LD+ + A 
Sbjct: 303 ERIRTYNF-PQGRVTDHRINLTLYKLDKVITGEALDEVIDAL 343


>gi|317179883|dbj|BAJ57669.1| peptide chain release factor 1 [Helicobacter pylori F32]
          Length = 352

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|317008750|gb|ADU79330.1| peptide chain release factor 1 [Helicobacter pylori India7]
          Length = 352

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|254778803|ref|YP_003056908.1| peptide chain release factor 1 [Helicobacter pylori B38]
 gi|254000714|emb|CAX28630.1| Peptide chain release factor 1 (RF-1) [Helicobacter pylori B38]
          Length = 352

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 172/340 (50%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y   K E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRFKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+ +LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|261338133|ref|ZP_05966017.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
 gi|270276761|gb|EFA22615.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
          Length = 362

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 164/342 (47%), Gaps = 16/342 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +   P +  +    + L R    L   +   +  +  + D     E+A E
Sbjct: 12  ALEEYRNIEQRMAQPDVASDPNAMRKLGRRHAELAGIVGPYQRYRSMIDDLEAAREMAAE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E      ++    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DPDFAEEAKRLETQLDDAAEALRTALIPRDPDDARDMIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AEKR +       +  E  G+K   L I+           +  LK E GVHR+ 
Sbjct: 130 RMYTRYAEKRGWSVTIQSENSTELGGVKDVQLAIRAKGTVAPEDGVWASLKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +IR+Y   P   + D RTN +  +   VLDGDL   + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDS 348


>gi|327460378|gb|EGF06715.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1057]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|293365352|ref|ZP_06612069.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307703894|ref|ZP_07640835.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
 gi|291316802|gb|EFE57238.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307622729|gb|EFO01725.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDVDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|322374351|ref|ZP_08048865.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|331266424|ref|YP_004326054.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
 gi|321279851|gb|EFX56890.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|326683096|emb|CBZ00714.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
          Length = 359

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   ++
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEDM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|84503529|ref|ZP_01001580.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
 gi|84388019|gb|EAQ01067.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
          Length = 349

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 179/342 (52%), Gaps = 16/342 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  +L  +  +        +   L RE   L   ++ I   +        L E 
Sbjct: 7   LAQITQRFEYLEARMAEGG-----GDFAALSREYSELRPVVATIAAWEQAQT---ALSEA 58

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     + +QR++ ++    +  Q   L    ADS  A +E+  G GG E+ 
Sbjct: 59  EGLRDDPEMRALADEEIQRLRHDLPELEQALQIALLPKDAADSRPAMIEIRPGTGGDEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R++E R ++ + +E+++ E  GIK     ++G N +  LK E GVHR+ 
Sbjct: 119 LFAGDLLRMYQRYSEARGWRFQVVELNETELGGIKEVVANVQGENVFARLKFESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I+I  S+ RIDT RASGAGGQHVNTTDSAVR
Sbjct: 179 RVPETESGGRIHTSAATVAVLPEA-EDVDIQIDPSEIRIDTMRASGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV    E+SQH+N+A A  +LR +L++LE QK  +       ++   G    
Sbjct: 238 ITHVPTGIVVVSS-EKSQHQNRAIAMQVLRTRLFDLERQKAADARAADRKAQVGTGDRSE 296

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       V+ GDLD+ + A  A
Sbjct: 297 RIRTYNF-PQGRVTDHRINLTLYRLDQVMQGDLDEVIDALTA 337


>gi|311086739|gb|ADP66820.1| peptide chain release factor 2 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 133/247 (53%), Positives = 184/247 (74%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S + D  D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIK
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S+T+ + G  A+GW + E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ S
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++++K++E     E +K++I WG QIRSY+L     +KDLRT +EK     VLDGDLDDF
Sbjct: 181 IQIRKKQEEKQKIEQNKSDITWGNQIRSYIL-DNSKIKDLRTGVEKNHVQSVLDGDLDDF 239

Query: 347 MKATLAI 353
           ++ +L +
Sbjct: 240 IEQSLIM 246


>gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [Mycobacterium ulcerans Agy99]
 gi|166223575|sp|A0PUL1|RF1_MYCUA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118571279|gb|ABL06030.1| peptide chain release factor 1 PrfA [Mycobacterium ulcerans Agy99]
          Length = 357

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 115/333 (34%), Positives = 167/333 (50%), Gaps = 11/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L     EA+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHADLERALADPELHSRPDEARKAGRRFARLARIVATYRKLVAAREDLETAHEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A    D S + E    L+    E++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  AA--TDESFVAEA-AELEARVAELDSQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+  +    L     +  G + ATL I          +  +K E GVHR
Sbjct: 125 ADLARMYIRYAERHGWTVTVLGETTSDLGGYRDATLAIASKGDTADGVWSRMKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   +  
Sbjct: 245 VRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEERAMADASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             +IR+Y   P   V D R   +  +   VLDG
Sbjct: 305 SERIRTYNF-PENRVTDHRIGYKSHNLDQVLDG 336


>gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
 gi|258604288|gb|EEW17526.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
          Length = 358

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   ++++    D+    E+
Sbjct: 8   IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDHEAASEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D    +E     + I    E            D +D  +E+ +GAGG E+  +A 
Sbjct: 68  AAE--DKEFAEEAKRLEEEIGELEEQLTDLLAPRDPHDGDDIVMEIKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  F TE L +++ +  G+K  TL I+        A+   K E GVHR+
Sbjct: 126 ELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  D+  ++ I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PT +VV CQ+ERSQ +N+A+A  +L A+L +L+ ++ E  A  G +++   +   
Sbjct: 246 RITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R   +  +   VLDGDL+  + A 
Sbjct: 306 ERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEALLAAL 345


>gi|291334339|gb|ADD93998.1| peptide chain release factor 1 [uncultured marine bacterium
           MedDCM-OCT-S11-C310]
          Length = 355

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 171/340 (50%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + + +E + ++  +   +  +          EL
Sbjct: 5   LAEVEARYEELNRLLADPVVLSDQNRLRDVAKEHREVEELVEIYRSYRQLETQIQDNKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             + +D  + +   + L  ++ E++          +     D  +  LE+ AG GG E+ 
Sbjct: 65  IADGEDPELTELAKEELPELETELQNLTDKINVLLMPKDPNDDKNVLLEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE+  ++ + + + +G + G+K   + ++    +  +K E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAERSGWRVDVMSMSEGTQGGVKEVIVWLRAT-TFFCVKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P  +++ EI+I   D RIDTYR+ GAGGQHVNTTDSAVR
Sbjct: 184 RVPATESQGRIHTSAATVAVMPEAEEA-EIDIRNEDLRIDTYRSQGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VVQCQ E+SQ KN+A+A  +L ++L +   QK               G    
Sbjct: 243 ITHLPTGMVVQCQDEKSQIKNRAKAMKVLSSRLLDFIRQKEAAERAAERKELVRTGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R      +   VL GDL+  + A 
Sbjct: 303 KIRTYNF-PQDRITDHRIGFSAHNLPAVLQGDLEAVLIAL 341


>gi|254424165|ref|ZP_05037883.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
 gi|196191654|gb|EDX86618.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
          Length = 367

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LI 71
            ++  +    L  +  DP + ++  E + + + R  L+  +    + Q+   +      +
Sbjct: 10  LESVEETFGELTRRMADPDVAKDPDEFQKIAKMRASLEETVQTYHQWQETDGELAGAREV 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E A + +   +       L+     +E   +   L     D  +  LE+ AG GG E+
Sbjct: 70  YKEAASDSEMKEMAAMEVTELEESLAALEKRLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLR+Y+R+AE + +K   L     +  G+K A + I+G   Y  LK E GVHR+
Sbjct: 130 GIWAGDLLRLYSRYAEGQGWKANLLSESRADMGGVKEAIVEIQGNQVYSKLKFESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V D +EI I   +  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPLTESGGRVHTSTATVAVMPEV-DDVEIHIDPKEIVMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++L  +E+   I    K+++G G 
Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKL--QEQKDEISSMRKSQVGSGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R N +  S   VL+GD++  ++  ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFSLPAVLEGDIETVVQTCISQDQ 352


>gi|55820816|ref|YP_139258.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55822719|ref|YP_141160.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627620|ref|YP_820239.1| peptide chain release factor 1 [Streptococcus thermophilus LMD-9]
 gi|81559540|sp|Q5M0B7|RF1_STRT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81560720|sp|Q5M4W4|RF1_STRT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122267782|sp|Q03L79|RF1_STRTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|55736801|gb|AAV60443.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55738704|gb|AAV62345.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116100897|gb|ABJ66043.1| bacterial peptide chain release factor 1 (bRF-1) [Streptococcus
           thermophilus LMD-9]
 gi|312278142|gb|ADQ62799.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03]
          Length = 359

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    +   +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVIAYREYKQVIQNISDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   + L++ K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDADLEEMAKEELKKSKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGESVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEMEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKALKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350


>gi|23012458|ref|ZP_00052537.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 361

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 171/344 (49%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +  D            L RE   LD  ++ I   +    +   +  L
Sbjct: 9   LDAILARHEIVTAQLADGS--AEAESIVQLSRELSELDGVVAAIHAYRAAEANLAGIRAL 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +    ++     +  +E      Q   L    AD   A LE+ AG GG E+
Sbjct: 67  IDEPGGDPEMRALAAEEKPDAEEALEQAHRALQLMLLPKDAADEKSAILEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE + ++ E +   +G   G +     +KG + +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++ I+E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLPEA-EEVDVVINEADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITH+PTGVVV  Q+ERSQHKN+A+A  +LRA+L++ E   ++   A   ++        
Sbjct: 246 RITHLPTGVVVFVQEERSQHKNRARAMALLRARLFDAERSAKDSARAADRKAQVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ G  LD+ + A + 
Sbjct: 306 ERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVT 348


>gi|22331914|ref|NP_191850.2| APG3 (ALBINO AND PALE GREEN); translation release factor/
           translation release factor, codon specific [Arabidopsis
           thaliana]
 gi|19699096|gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|21928033|gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|34392768|dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana]
 gi|332646889|gb|AEE80410.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 422

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 183/347 (52%), Gaps = 13/347 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+ K  DP +  N  E + L +    LD  ++  +  +D     L    LA
Sbjct: 62  ESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLA 121

Query: 77  LEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            E  DD  + +     +  +  E+E  + +     L S   D+ +  LEV AG GG E+ 
Sbjct: 122 KEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAA 181

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            W   L+RMY R++E+  +K   +   + E  G K+  + IKG   Y  LK E GVHR+ 
Sbjct: 182 IWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQ 241

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ + P   D +E+ I   D  + + R+ GAGGQ+VN  ++A+ 
Sbjct: 242 RVPQTETQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTSARSGGAGGQNVNKVETAID 300

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++  RE+   I    K+++G G  
Sbjct: 301 LFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKV--REQQEKIRNERKSQVGTGAR 358

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D R  +   + +  LDG L+D ++A  A+++
Sbjct: 359 SEKIRTYNYKDS-RVTDHRLKM-NFALTTFLDGALEDAVQACAALEQ 403


>gi|330863233|emb|CBX73359.1| peptide chain release factor 1 [Yersinia enterocolitica W22703]
          Length = 330

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 112/313 (35%), Positives = 168/313 (53%), Gaps = 9/313 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D ++  +    + L RE   L +     KE +  + D++   E+
Sbjct: 9   LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRS-VQDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   D L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++  A+   +         
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQAEASERRNLLGSGDRSD 305

Query: 311 QIRSYVLQPYQMV 323
           + R+Y   P   V
Sbjct: 306 RNRTYNF-PQGRV 317


>gi|190572913|ref|YP_001970758.1| peptide chain release factor 1 [Stenotrophomonas maltophilia K279a]
 gi|229576662|sp|B2FQ14|RF1_STRMK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190010835|emb|CAQ44444.1| putative peptide chain release factor 1 [Stenotrophomonas
           maltophilia K279a]
          Length = 360

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/321 (33%), Positives = 166/321 (51%), Gaps = 8/321 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P +  +    + L RE   L+     + +      D      +  + D   +  E     
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPIAIALADESRAKADLAAAEGMRADPDLRELADEEIAAA 85

Query: 93  Q-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           Q R+    +      +     D  + +LEV AG GG E+  +A  L RMY R+AE++ +K
Sbjct: 86  QARLLELEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + GE  G K     + G  A+  LK E G HR+ R+   +S  R HTS +++ +
Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  +I I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH 
Sbjct: 206 IPEADEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328
           N+ +A   L+A+L + E   + + A   ES + ++G G    +IR+Y   P   + D R 
Sbjct: 266 NRDKAMKRLKAQLLDAER--QRQDAAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322

Query: 329 -NIEKTSPSDVLDGDLDDFMK 348
             +      ++L GDLD  ++
Sbjct: 323 EGLTLYDLPNILAGDLDPLLQ 343


>gi|328946334|gb|EGG40478.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1087]
 gi|332361225|gb|EGJ39029.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1056]
          Length = 359

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTNRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|306823422|ref|ZP_07456797.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|309802666|ref|ZP_07696770.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
 gi|304553129|gb|EFM41041.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|308220730|gb|EFO77038.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
          Length = 362

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 164/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +  +P +  +  + + L R    L   +S     +    D     E+A E
Sbjct: 12  ALEEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DPDFAEEAKRLENELPEFEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR +       +  E  G+K   L I+           +  LK E GVHR+ 
Sbjct: 130 RMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++    
Sbjct: 250 RMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|220906439|ref|YP_002481750.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
 gi|254790876|sp|B8HXV0|RF1_CYAP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219863050|gb|ACL43389.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
          Length = 364

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 98/341 (28%), Positives = 175/341 (51%), Gaps = 13/341 (3%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DD 81
              L  +  DP +  +  E + + + R  L+  +      +          ++A E   D
Sbjct: 17  FHELTRRLADPEVATDPEEFQRVAKARASLEETVDTYDTWKTVQQHLAEARQIAREAASD 76

Query: 82  CSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
             + +     +  +  +  + +       L     D  +  LE+ AG GG E+  WA  L
Sbjct: 77  PELQEMAVQEVNELTEKSAHLEQRLKILLLPRDPNDDKNIMLEIRAGTGGDEASIWAGDL 136

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +R+Y+R+AE ++++ + +    GE  G K A L I+G   Y  LK E GVHR+ R+   +
Sbjct: 137 VRLYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKLKYEAGVHRVQRVPATE 196

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           ++ R HTS +++ + P V D +E++I   D  + T R+ GAGGQ+VN  ++AV + H PT
Sbjct: 197 ASGRVHTSTATVAIMPEV-DEVEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPT 255

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ + C +ERSQ +NK +A  +LRAKLYE++L  +E+ + I    ++++G G    +IR+
Sbjct: 256 GIRIFCTEERSQLQNKERAMQILRAKLYEMKL--QEQQSEITSRRRSQVGTGSRSEKIRT 313

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y  +      D R   +    + VL+GD++  ++A +   +
Sbjct: 314 YNYKD-NRATDHRLG-QNFPLNQVLEGDIEGIIQACITQDQ 352


>gi|300871300|ref|YP_003786173.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
 gi|300689001|gb|ADK31672.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
          Length = 358

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +     + +  K  D ++ ++    + LM+++  +++ ++  K+++  L +     E+
Sbjct: 7   LSSVENTYNDIVDKLNDANI-KDNRVIQDLMKKKSEIEDIVNEYKKLKTVLKEIEDANEM 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D D  +       ++ +  + E      +   L   + D  +  +E+  G GG ES
Sbjct: 66  LNHSDTDKELKNMALLEIEELNQKKENIINDLRLLLLPKDKNDGKNIIVEIRVGTGGDES 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY+R+ E+  FK E ++I   E  G K     + G NAY  LK E G HR+
Sbjct: 126 ALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSVSGKNAYRTLKFESGTHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R HTS S++ + P  ++S ++ I + D R+D +R+SG GGQ VNTTDSAV
Sbjct: 186 QRIPATESGGRIHTSASTVAIMPEAEES-DVIIKDEDIRVDIFRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  +R+   +     K   G   
Sbjct: 245 RITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKEDKERRDKIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+        +DG++ +   A    ++
Sbjct: 305 ERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQ 349


>gi|125717977|ref|YP_001035110.1| peptide chain release factor 1 [Streptococcus sanguinis SK36]
 gi|166223611|sp|A3CN05|RF1_STRSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125497894|gb|ABN44560.1| Protein chain release factor A, putative [Streptococcus sanguinis
           SK36]
 gi|324991176|gb|EGC23110.1| peptide chain release factor RF1 [Streptococcus sanguinis SK353]
 gi|324994440|gb|EGC26353.1| peptide chain release factor RF1 [Streptococcus sanguinis SK678]
          Length = 359

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|308183875|ref|YP_003928008.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
 gi|308059795|gb|ADO01691.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
          Length = 352

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 175/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L     +  +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|171741092|ref|ZP_02916899.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
 gi|171276706|gb|EDT44367.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
          Length = 362

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 164/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +  +P +  +  + + L R    L   +S     +    D     E+A E
Sbjct: 12  ALEEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DPDFAEEAKRLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR +       +  E  G+K   L I+           +  LK E GVHR+ 
Sbjct: 130 RMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++    
Sbjct: 250 RMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|189485187|ref|YP_001956128.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|238054475|sp|B1GZI5|RF1_UNCTG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170287146|dbj|BAG13667.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 356

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 172/355 (48%), Gaps = 17/355 (4%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +L  L  +F           + +K  D  +  N  E + L ++  +L            
Sbjct: 4   EKLKLLNSIF---------EEVESKLSDLSVISNQEEYRELTKQHFYLRPLAEKYIRYSK 54

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLE 120
            L +     EL     D  + +        +  K      + + LL  +   +  +  +E
Sbjct: 55  LLNEIKDAEELQK-SKDAEMKEIAFAEYNNLIEKRNQMENEIKVLLIPTDPNEDKNIIVE 113

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG GG E+  +   L  MYTR+AE+  +K E L  +     G K     I G   +  
Sbjct: 114 IRAGTGGNEAALFVGDLYGMYTRFAERNGWKYEVLGSNPTGLGGYKEVVFEINGGKVWRC 173

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
            K E+G HR+ R+   +++ R HTS +++ V P   + +++EI   D RIDTYRASGAGG
Sbjct: 174 FKFERGAHRVQRVPETEASGRVHTSAATVAVLPEA-EEVDVEIKMEDLRIDTYRASGAGG 232

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIG 299
           QH+N TDSA+RITH+PTG+VV CQ ERSQ KN+A+A+ +LRAK+YE  + + E  +++  
Sbjct: 233 QHINKTDSAIRITHLPTGLVVACQDERSQIKNRAKAFKVLRAKIYEQRILEHEMRLSSER 292

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +          +IR+Y   P   + D R      + ++V+DG+L + +   +   
Sbjct: 293 KQQIGSGDRSEKIRTYNF-PQNRITDHRIGYSVYNITEVMDGNLSELVNKLIKAD 346


>gi|332716892|ref|YP_004444358.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
 gi|325063577|gb|ADY67267.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
          Length = 360

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 176/342 (51%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L+  +  ++E +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELEPVVKKVREYEKAVSEAADLQALL 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  ++  +   + E     L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADKTTDKDMRDLAEMELPEVEARIGELEKEMQVLLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIATISGRGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I++EI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLPEA-EDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG++V    E+SQH+N+A+A  +LR++LY++E QK E   +    S+   G    
Sbjct: 246 ITHLPTGLIVTSS-EKSQHQNRAKAMQVLRSRLYDIERQKVESERSADRKSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++G++D+ + A +A
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRMIEGEIDELVDALIA 345


>gi|225621133|ref|YP_002722391.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
 gi|254790865|sp|C0QWA1|RF1_BRAHW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225215953|gb|ACN84687.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
          Length = 358

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 113/353 (32%), Positives = 183/353 (51%), Gaps = 14/353 (3%)

Query: 12  GLFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D  + V++    +  K  D ++ ++    + LM+++  +++ +   K+++  L +  
Sbjct: 2   SIIDKLSLVEKTYEDIVQKLNDANI-KDNRVIQDLMKKKSEIEDIVEEYKKLKVVLKEIE 60

Query: 71  ILLELALEED-DCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGA 125
              E+    D D  +       ++ +  + E      +   L   + D  +  +E+  G 
Sbjct: 61  ESNEMVNNPDTDKELKDMALLEIEDLNQKKEDIVNGLRLLLLPKDKNDGKNIIVEIRVGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ES  +   L RMYTR+ E+   K E ++    E  G K     + G +AY  LK E 
Sbjct: 121 GGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGKDAYRTLKFES 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ RI   +S  R HTS S++ V P   +S ++ I + D R+D +R+SG GGQ VNT
Sbjct: 181 GTHRVQRIPATESGGRIHTSASTVAVMPEAMES-DVVIKDEDIRVDIFRSSGPGGQSVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  + E  A   +  + +
Sbjct: 240 TDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKE--EAERKAKEAKERREQ 297

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IG G    +IR+Y   P   V D R N+        +DG++ +   A    ++
Sbjct: 298 IGSGDRSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQ 349


>gi|320528629|ref|ZP_08029782.1| peptide chain release factor 1 [Solobacterium moorei F0204]
 gi|320130995|gb|EFW23572.1| peptide chain release factor 1 [Solobacterium moorei F0204]
          Length = 358

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   +  K  D  +  +      L +E+  L   +    ++   L   +   + 
Sbjct: 8   LSEIEKQYKEIVEKLMDEKVMSDPKLLTKLSKEQARLTQPVEAYHQLL-ELDSRIAQADE 66

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L+E+D  + +         + E    +E  Q   +     D +D  +E+  GAGG E  
Sbjct: 67  MLKENDPELKEMARMEKDECEPEREVLLERIQHLLVPRDPDDDHDVIMEIRGGAGGDEGN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE + +K + LE    E  G       +KG + Y  LK E GVHR+ 
Sbjct: 127 IFAGDLYRMYSKYAESKGWKVQVLEASVSEAGGYTQIIFSVKGTDVYKELKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++   P  +D+ +IEI   D  I+T+RASGAGGQH+N TDSAVR
Sbjct: 187 RVPKTETQGRIHTSTATVLCQPEAEDT-DIEIDPKDLTIETHRASGAGGQHINKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGR 310
           I H+PTG+ V CQ  RSQ +N+  A  ++RA++YE L+  + EE   I  +         
Sbjct: 246 IVHVPTGITVNCQDGRSQIENRETAMRLIRARVYEELKRIQEEEAGKIRRAKIGTGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   V D R ++  T    +++G LD  ++  LA +
Sbjct: 306 KIRTYNY-PQNRVTDHRISLTITQLDRIMEGKLDGVIEGLLAEE 348


>gi|300172696|ref|YP_003771861.1| peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887074|emb|CBL91042.1| Peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 357

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 95/345 (27%), Positives = 167/345 (48%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L++E   +   +      Q  +       ++
Sbjct: 8   LQTVVDRYDELNEQLADPDVAGDGQQYMALLKEAGEMRETVEVYTHYQQVMQGISDAEDM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  +     ++L  +K E     +  +   L     D  +  +E+   AGG ES 
Sbjct: 68  L---DDAEMAPLAKEDLNTLKPEKIVLEDQLKILMLPKDPNDDKNIIMEIRGAAGGDESS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAADLLDMYRRYAEKQRWVVSIIDETITEVGGYKEVAIMITGDNVYSKLKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR
Sbjct: 185 RVPSTETQGRVHTSTATVGVMPEF-EEIDFELAESDLEEEFFRSGGAGGQNVNKVSTAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           + H PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E   A   +S+        
Sbjct: 244 LVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +++G+L + + A +   +
Sbjct: 304 RIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEIVDALVIADQ 347


>gi|319947033|ref|ZP_08021267.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
 gi|319747081|gb|EFV99340.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
          Length = 359

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 164/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDMVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDSDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|116511384|ref|YP_808600.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123125765|sp|Q031E4|RF1_LACLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116107038|gb|ABJ72178.1| bacterial peptide chain release factor 1 (bRF-1) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 357

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   E +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
           +  +L E  L+++   +L+E   + +  K  +E + +   L     D  +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V +  E+ I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEV-EEFEMTIEQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++   Q   +  N    S    
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 300 GDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|302381433|ref|YP_003817256.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192061|gb|ADK99632.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 367

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 173/342 (50%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   +      +  +     +   L  +
Sbjct: 20  LDQVLDRFHQVEARMGA---ASDGQEIVRLSKEHAEMKPVADAVLALAKARTEIEELQAM 76

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134
             + +  +++ +  + L     E+E      L   +AD N  A LEV AG GG E+  +A
Sbjct: 77  TADPEMAAMVADELETLNARLPEMERDVALLLAPRDADENASAVLEVRAGTGGDEAALFA 136

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+A  R +K E     +G+  G K     + G   +G LK E GVHR+ R+ 
Sbjct: 137 GDLFRMYSRYASTRGWKVELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVHRVQRVP 196

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P V + +EI+I + D RIDTYRASG+GGQHVN TDSAVRITH
Sbjct: 197 TTEAGGRIHTSAATVAVLPEV-EDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRITH 255

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
            P+G+VV    E+SQH N+ +A   LR +LY+++ Q ++   +    S+   G    +IR
Sbjct: 256 FPSGIVVTSS-EKSQHVNRDKAMKNLRVRLYDMQRQMKDNARSDARKSQVGSGDRSERIR 314

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R  +   S   +L+GDLD  + A +A  +
Sbjct: 315 TYNF-PQGRVTDHRIGLTLHSLPQILEGDLDALLNALIAEDQ 355


>gi|171911189|ref|ZP_02926659.1| peptide chain release factor 1 [Verrucomicrobium spinosum DSM 4136]
          Length = 358

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 174/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R S L      P+ + +  +A  L+RE + L+  +    E Q          EL
Sbjct: 7   IEKKKDRFSELEEMMGHPNFYDDNRKAGDLLREHRSLEALVKAWSEYQRTEQQIADNQEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
           A    D  +     + L  ++  +   + E     L     +  D  +E+ AG GG E+ 
Sbjct: 67  AK-SGDAELAALAEEELPTLQARLLELEGEVQRHILPPDPLEGRDVIMEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+R +K E++E    +  G K     + G + +  LK E GVHR+ 
Sbjct: 126 IFAGDLYRMYNRYAEERGWKIESMEASPSDAGGYKEVVFKVSGEDVFRTLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++++   + RI+  RASG GGQ VNTTDSAV+
Sbjct: 186 RVPATEAQGRIHTSAATVAVLPEA-EEVDLQLKPDELRIEVCRASGHGGQGVNTTDSAVQ 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H+PTG++V+CQ  RSQ KNK +A  ++R++L  LE +++EE A      K  IG G  
Sbjct: 245 VMHLPTGMIVRCQDGRSQLKNKEKAITIMRSRL--LEKKQQEEAAKYSAHRKALIGGGGR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D R ++   +    +DG + D +    A +
Sbjct: 303 EEKIRTYNY-PQNRITDHRIDVTLYNLDMFVDGRIGDLVDKLQASE 347


>gi|189461883|ref|ZP_03010668.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
 gi|189431477|gb|EDV00462.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
          Length = 369

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 171/352 (48%), Gaps = 16/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L + +   KE    L        +
Sbjct: 11  LDGLVARFEEVSTLITDPNVISDQKRYVKLTKEYKELGDLMQARKEYLQCLNGLEEAK-M 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + E+D  + +   +     +  +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 70  MMAENDPEMKEMAREEAAACEARLPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 IFAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 249 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359


>gi|110680314|ref|YP_683321.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
 gi|119361597|sp|Q164F8|RF1_ROSDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109456430|gb|ABG32635.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
          Length = 351

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 114/313 (36%), Positives = 169/313 (53%), Gaps = 11/313 (3%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV----E 100
           L +E   L   +  I   Q  L D     E+     D  +     + + R+K  +     
Sbjct: 33  LAKEYSDLRPVVEQISAYQQLLSDLEDAAEML---GDPDMAPLAEEEIPRLKSALPQAEA 89

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             Q   L   +AD+  A LE+  G GG E+  +A  L RMY R+AE + +K + +E+ + 
Sbjct: 90  ALQLALLPKDKADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDLIELQET 149

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  GIK     IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P   + ++
Sbjct: 150 ELGGIKEVVAHIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEA-EDVD 208

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I I  +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L
Sbjct: 209 IHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVTSS-EKSQHRNREIAMQVL 267

Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +A+LY+LE  + ++  +   +++   G    +IR+Y   P   + D R N+       VL
Sbjct: 268 KARLYDLERSRVDDERSADRAAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLDAVL 326

Query: 340 DGDLDDFMKATLA 352
            GDLD+ + A  A
Sbjct: 327 QGDLDEIIDALTA 339


>gi|163743155|ref|ZP_02150537.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
 gi|161383572|gb|EDQ07959.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
          Length = 351

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 176/342 (51%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     ++     L +E   L      I   +  L D     ++
Sbjct: 7   LEQILQRFQYLEAAMAEGVAGADIA---ALAKEYSDLRPVAEQISAYRRLLSDLEEAEQM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+    E E+  Q   L   EAD+  A LE+  G GG E+  +A
Sbjct: 64  LADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E    E  G+K     +KG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWGIEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I   D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLPEA-EDVDLRIDPGDLRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG++V    E+SQH+N+  A  ++R +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 243 IPTGIIVVSS-EKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRASQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 302 TYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342


>gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Corynebacterium jeikeium K411]
 gi|119361528|sp|Q4JUI9|RF1_CORJK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68264030|emb|CAI37518.1| peptide chain release factor RF-1 [Corynebacterium jeikeium K411]
          Length = 358

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   ++++    D     E+
Sbjct: 8   IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDQEAASEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D    +E     + I    E            D +D  +E+ +GAGG E+  +A 
Sbjct: 68  ASE--DKEFAEEAKRLEEEISELEEQLTDLLAPRDPHDGDDIVMEIKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  F TE L +++ +  G+K  TL I+        A+   K E GVHR+
Sbjct: 126 ELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  D+  ++ I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PT +VV CQ+ERSQ +N+A+A  +L A+L +L+ ++ E  A  G +++   +   
Sbjct: 246 RITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R   +  +   VLDGDL+  + A 
Sbjct: 306 ERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEALLAAL 345


>gi|294155813|ref|YP_003560197.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
 gi|291600475|gb|ADE19971.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
          Length = 358

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 178/342 (52%), Gaps = 7/342 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N   + + +     DP++  ++ +   + +E   ++  +       +   +     E+ L
Sbjct: 11  NIKNKYNEMQEMLNDPNVINDIKKYTKINKELNSIEEIVKCFNHYLNAEQNFKSSKEM-L 69

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            E D  +++     + + +  +    E  +   L   + D  D  +E+   AGG E+  +
Sbjct: 70  SEKDEEMVELAKIEITQSEEIMTKLTEELKILILPKDKNDDKDVIVEIRGAAGGDEANIF 129

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY +W+++   K + L+ +  E  G    T  I G  AY  LK E GVHR+ RI
Sbjct: 130 AGDLFRMYQKWSDQNDMKLKVLDENRAEAGGFTLITFSILGDKAYSKLKFESGVHRVQRI 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P +DD IEIE+   D RID +R+SG GGQ VNTTDSAVRIT
Sbjct: 190 PVTETKGRVHTSTATVTVMPEIDDDIEIEVKSEDIRIDVFRSSGNGGQSVNTTDSAVRIT 249

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H  +G+VV CQ+ +SQ +NK  A  +L++KLY+LEL+K+EE  +             +IR
Sbjct: 250 HASSGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKKEEEESGYRKLAGSGFRSEKIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R +   +  S V++G L+  + A LA+++
Sbjct: 310 TYNY-PQDRVTDHRISYSTS-LSPVMEGKLNSIIDALLAMEQ 349


>gi|207091639|ref|ZP_03239426.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 352

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|308062940|gb|ADO04827.1| peptide chain release factor 1 [Helicobacter pylori Sat464]
          Length = 352

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 175/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R + L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYNELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|288802476|ref|ZP_06407915.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
 gi|288335004|gb|EFC73440.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
          Length = 370

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 169/353 (47%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E+D  + +   + L   + ++  +E  + + LL      D+ +  +E+  GAGG E+
Sbjct: 71  ITNENDAEMKEMAREELSENEALQPALEE-EIKLLLVPKDPEDAKNVQMEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+
Sbjct: 130 ALFAGDLFNMYKRYCDKKDWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYVDDIASRRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           ++G++ D + A    +
Sbjct: 309 LVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAE 360


>gi|114704325|ref|ZP_01437233.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
 gi|114539110|gb|EAU42230.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
          Length = 359

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 178/344 (51%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + L       P    +      L  E   L+  ++ I+E +    +      
Sbjct: 9   LDEILARFTRLEMDMAKGP----DHEVYSKLAAEYASLEEVVAAIREFRALETELADAES 64

Query: 75  LALE-EDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  + E D  +       +  ++   E      Q   L    AD   A LE+ AG GG+E
Sbjct: 65  LLDDPESDREMRNLAGVEVDDLRSRREGLRGRIQILLLPKDSADEKGAILEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE  ++K E L   +GE  G K     IKG   +  LK E GVHR
Sbjct: 125 AGLFAGDLYRMYQRYAELNRWKVELLSASEGEVGGFKEVIAAIKGNGVFSRLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + I+I++   D RIDT RASGAGGQHVNTTDSA
Sbjct: 185 VQRVPETESGGRIHTSAATVAVLPEA-EDIDIDVRNEDIRIDTMRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           VRITH+PTG+VV    E+SQH+N+AQA  +L+AKLY++E QK ++  +    S+   G  
Sbjct: 244 VRITHLPTGIVVTSS-EKSQHQNRAQAMQVLKAKLYDMERQKYDDERSAARKSQVGSGDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       V++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDKVIEGEMEELVDALVA 345


>gi|254412235|ref|ZP_05026010.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181201|gb|EDX76190.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
          Length = 371

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 185/352 (52%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           L D   +  Q    L  +  DP +  + +E + + + R  L+  +   +  +    +   
Sbjct: 6   LLDKLQSVEQTFHELTRRLADPDIATDPVEVQRVAKARSSLEEVVITYELWKTAQEELTG 65

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
             ++  E + D  + +  S  ++ ++ ++E  +       L     D  +  LE+ AG G
Sbjct: 66  ARQILKEANGDGEMHEMASLEVEELQTKLEELEKRLKILLLPRDPNDDKNIMLEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  WA  L+RMY+R+AE + ++ + L     +  G K A L I+G   Y  LK E G
Sbjct: 126 GDEASIWAGDLVRMYSRYAETQNWRVKLLSESPADMGGFKEAILEIQGEQVYSKLKFEAG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P V D +EIE+   D  + T R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPVTEAGGRVHTSTATVAVMPEV-DDVEIEVDPKDLEVSTARSGGAGGQNVNKV 244

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L  RE+   +    ++++
Sbjct: 245 ETAVDLFHKPTGIRIFCTEERSQLQNRERALQILRAKLYEMKL--REQQEAVTSMRRSQV 302

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y  +    V D R + +  S + +L+GD++  ++A +   +
Sbjct: 303 GTGSRSEKIRTYNYKD-NRVTDHRLS-QNYSLNSLLEGDIESVIQACITQDQ 352


>gi|125623422|ref|YP_001031905.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223566|sp|A2RIR4|RF1_LACLM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124492230|emb|CAL97159.1| peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070169|gb|ADJ59569.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 357

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   E +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
           +  +L E  L+++   +L+E   + +  K  +E + +   L     D  +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V +  E+ I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEV-EEFEMTIEQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++   Q   +  N    S    
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNTERKSTVGT 299

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 300 GDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|67923568|ref|ZP_00517041.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
 gi|67854594|gb|EAM49880.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
          Length = 370

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 179/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  +  Q+   +     ++
Sbjct: 10  LQSVEQTYQELTRRLADPDIATNPDELQRVAKLRSSLEETVNTYQTWQETQEELKGAKQI 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +  S  +  ++  +E  +       L     D  +  LE+ AG GG E+
Sbjct: 70  LKEAGSDPEMREMASMEVSELEENIEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +++  + +     +  G K A L I G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQRWNVKLVSESLADMGGFKEAILEITGEQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +EIEI   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMPEV-DDVEIEIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E  +    S+   G   
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRSQVGTGSRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +    V D R + +  +    L+GD+D+ +++ ++  +
Sbjct: 309 EKIRTYNYKD-NRVTDHRLS-QNFALVGALEGDIDNIIESCISQDQ 352


>gi|325689728|gb|EGD31732.1| peptide chain release factor RF1 [Streptococcus sanguinis SK115]
          Length = 359

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     ++
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEDM 66

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P + + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEI-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|260592403|ref|ZP_05857861.1| peptide chain release factor 1 [Prevotella veroralis F0319]
 gi|260535639|gb|EEX18256.1| peptide chain release factor 1 [Prevotella veroralis F0319]
          Length = 370

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 167/353 (47%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARKRYITCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  + +   + L   + ++  +E  + + LL      D+ +  +E+  GAGG E+
Sbjct: 71  IANESDAEMKEMAREELAENEELQPRLEE-EIKILLVPKDPEDAKNVQMEIRGGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+
Sbjct: 130 ALFAGDLFNMYKRYCDKKGWKLSITSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +Y+ E QK  ++IA+  ++
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYIDDIASRRKT 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           ++G++ + + A    +
Sbjct: 309 LVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGEIQEMIDALTVAE 360


>gi|86138685|ref|ZP_01057258.1| peptide chain release factor 1 [Roseobacter sp. MED193]
 gi|85824745|gb|EAQ44947.1| peptide chain release factor 1 [Roseobacter sp. MED193]
          Length = 361

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 123/339 (36%), Positives = 174/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     +  E   L RE   +      I   +  L D      +
Sbjct: 17  LEQILQRFQYLEAAMAEG---ASGAEIANLAREYSEIKPVAEQITAYRQLLTDLEDAEAM 73

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E    L+       E  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 74  LSDPDMKELAAEEIPELKAALPGAEEALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  GIK     IKG N +  +K E GVHR+ R+ 
Sbjct: 134 GDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVAHIKGENVFARMKYESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++++I  SD RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 194 VTESGGRIHTSAATVAVLPEAQE-VDVQIDPSDIRIDTMRASGAGGQHVNTTDSAVRITH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTGV+V    E+SQH+N+  A  +LRA+LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 253 IPTGVMV-VSAEKSQHRNREIAMQVLRARLYDLERQRVDSERSADRASQVGSGDRSERIR 311

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       ++ GDLD+ + A  A
Sbjct: 312 TYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTA 349


>gi|210634612|ref|ZP_03298189.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
 gi|210158740|gb|EEA89711.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
          Length = 355

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 174/341 (51%), Gaps = 13/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  K  DP +  ++ E   L +E  H  + +   +E    L D     E+
Sbjct: 5   LEKIIIAFEELEKKLSDPSIASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIEAAKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D    +     +   + ++    E  +   +     D  D  +E+ + AGG E+ 
Sbjct: 65  LREATDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E +K+K E L+    +  G KS    + G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYQRFIESKKWKMEVLDSSPSDAGGFKSIEFKVTGDRVYSVMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+++I++SD RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLPEA-DEIDVQINQSDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q++RSQ +N+     MLRA+LYE+EL+K++  A +G     +IG    
Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERSAQIGHGNR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
             +IR+Y  QP   V D R     ++ + VL GD L   ++
Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGF-NSTYNGVLLGDQLSSVIE 340


>gi|257064123|ref|YP_003143795.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
 gi|256791776|gb|ACV22446.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
          Length = 352

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 170/338 (50%), Gaps = 10/338 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              L  K  DP +  +  E   L +E       +   +E      D      +  + D  
Sbjct: 12  YKELEQKLGDPAVLADQKEYTRLSKEYSKQGPLVEKAREYLQACEDIDDAKSMLGDADMR 71

Query: 83  SILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              QET    + ++    E  +F  +    AD  D  +E+   AGG E+  +A  L +MY
Sbjct: 72  EFAQETIAECEAKLPGLEEDIKFMLIPEDPADEKDIIVEIRGAAGGDEAAIFAGDLYKMY 131

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+ E +++K E +++   E  G K     +KG + Y  +K E GVHR+ R+   +S  R
Sbjct: 132 ARFCESQRWKIETMDVSASEAGGYKEIQFKVKGDHVYSLMKFESGVHRVQRVPKTESQGR 191

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P   D I++EI+E+D RID YRA G GGQ VNTTDSAVRITH+P+G+VV
Sbjct: 192 IHTSTATVAVLPEA-DEIDVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITHLPSGLVV 250

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
           Q Q ++SQ +NK  A  +LR++LY  E    E+ A  G     +IG G    +IR+Y   
Sbjct: 251 QSQDQKSQLQNKIAAMAVLRSRLY--EKMLAEQQAAEGAERLAQIGSGDRAEKIRTYNA- 307

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           P   V D R      + + VL GD L D + A  A  +
Sbjct: 308 PQDRVTDHRIGY-NGTYNGVLLGDGLGDLITALQAADR 344


>gi|113954440|ref|YP_729638.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
 gi|119361628|sp|Q0ID34|RF1_SYNS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113881791|gb|ABI46749.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
          Length = 364

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +     +Q    + +    L
Sbjct: 10  LEAASSSFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQAKSL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D ++ +     LQ +       ++      L     D     LE+ AGAGG E+
Sbjct: 70  LKESRGDAAMEELAQQELQELDRHHADLIQRITLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R++ +R +    +  ++ +  G K   L +KG   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPSTESQGRVHTSTATVAVMPEA-DPVEVQIDPRDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE +L   E  A+   + ++++G G 
Sbjct: 249 DLMHKPTGIRVFCTQERSQMQNRERALEILRAKLYERQL--AEANASERSARRSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +  +M  D R      S   VL+G +DD + A +A ++
Sbjct: 307 RSEKIRTYNAKDNRM-TDHRLG-RNFSLDPVLEGQMDDVIDACIAEEQ 352


>gi|295105808|emb|CBL03351.1| bacterial peptide chain release factor 1 (bRF-1) [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 357

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 175/345 (50%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +Q    L  +  DP +  +  E   L +E           +E      D     E+
Sbjct: 10  LEKIIQAYEDLQGRMGDPAVLADQKEYNRLAKEYASQGPLAKKAREYVQASDDLAAAKEM 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE    ++ ++    E  +F  + +  AD  D  +E+ A AGG E+  +A
Sbjct: 70  MADPDMREFAQEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY R+A  + +KTE +++   E  G K     +KG + Y  +K E GVHR+ R+ 
Sbjct: 130 GDLYKMYERFAGAQGWKTETMDVSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +E++I+E+D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSTATVAVLPEA-DEVEVDINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VVQ Q ++SQ +NK  A  +LRA+LY  E    E+ A  G     +IG G    +
Sbjct: 249 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLY--EKMLAEQQAAEGAERLAQIGSGDRSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R      + + VL GD L D + A  A  +
Sbjct: 307 IRTYNG-PQDRVTDHRIGY-NGTYNGVLLGDGLGDVITALQAADR 349


>gi|325281736|ref|YP_004254278.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
 gi|324313545|gb|ADY34098.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
          Length = 368

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 94/346 (27%), Positives = 172/346 (49%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +     DP + Q++     L +E + L+       + +  L       ++
Sbjct: 9   LETYYIRFKEIGQLITDPEVIQDMERYVRLTKEYKELETITRTADKFKAALLSVEESKDI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
            L E+D  + +     ++ ++ ++    ++ + LL  +   DS +  LE+  G GG E+ 
Sbjct: 69  LLHEEDKELREMAEMEIEELEDKLPGMEQELKLLLVPADPDDSKNVILEIRGGTGGDEAC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E++ +K E    ++G   G K     + G   YG +K E GVHR+ 
Sbjct: 129 LFAGDLFRMYAKFCERKGWKVEVTNANEGTAGGYKEIVASVTGKGVYGIMKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   ++ E+EI+E   + DT+R+ GAGGQ+VN  +S VR
Sbjct: 189 RVPATETQGRVHTSAATVAVLPEA-EAFEVEINEGAIKWDTFRSGGAGGQNVNKVESGVR 247

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGV     ++C + R Q KNK +A + LR  +Y+ E QK  ++I+   ++ 
Sbjct: 248 LRYVWQNPNTGVAEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDISAKRKTM 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +      +IR+Y   P   V D R N    +   V+DG++D+ ++
Sbjct: 308 VSTGDRSAKIRTYNY-PQGRVTDHRINFTLYNLQAVMDGEIDEIIE 352


>gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16]
          Length = 352

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSFIEEISITSKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|116075738|ref|ZP_01472997.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
 gi|116067053|gb|EAU72808.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
          Length = 364

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 103/355 (29%), Positives = 169/355 (47%), Gaps = 16/355 (4%)

Query: 14  FDWDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
            D +  + RL         L  +  DP +  +    + + RER  L+  +   + +Q   
Sbjct: 1   MDLETLISRLDAATNSFHNLERQLADPDVASDPKRLQSIARERSRLEPLVQDYQSLQQVE 60

Query: 67  CDNLILLELALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEV 121
            +      L  E   D  + +     +Q +       +E      L S   D     LE+
Sbjct: 61  EERQQAESLLKESRGDSGMEELARLEIQDLNERQATLIERVTLALLPSDPRDERSVMLEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  WA  L RMY R+  ++ +  + +  +  +  G +   L +KG   +  L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERYGSRQGWNVQPVSANAADLGGYRELILSVKGDAVFSQL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS +++ V P   D +E++I  ++  I T R+ GAGGQ
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVEVQIDPTELEISTARSGGAGGQ 239

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKLYE +L +     +    
Sbjct: 240 NVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQLAEANAAESSARR 299

Query: 302 SKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++   G    +IR+Y  +    V D R      S   +L+G +DD + A +A ++
Sbjct: 300 AQVGTGDRSEKIRTYNAKD-NRVTDHRLG-RNFSLDPMLEGQMDDVIGACIAEEQ 352


>gi|297821206|ref|XP_002878486.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324324|gb|EFH54745.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 184/347 (53%), Gaps = 13/347 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+ K  DP +  N  E + L +    LD  ++  +  +D     L    LA
Sbjct: 62  ESVEKTWKELSVKLADPAVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLA 121

Query: 77  LEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            E  DD  + +     +  + +E+E  + +     L S   D+ +  LEV AG GG E+ 
Sbjct: 122 KEAGDDEDMAEMIGSEINSLSIEIEGLEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAA 181

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            W   L+RMY R++E+  +K   +   + E  G K+  + IKG   Y  LK E GVHR+ 
Sbjct: 182 IWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQ 241

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ + P   D +E+ I   D  + + R+ GAGGQ+VN  ++A+ 
Sbjct: 242 RVPQTETQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTSARSGGAGGQNVNKVETAID 300

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++  RE+   I    K+++G G  
Sbjct: 301 LFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKV--REQQEKIRNERKSQVGTGAR 358

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D R  +   + +  LDG L+D ++A  A+++
Sbjct: 359 SEKIRTYNYKDS-RVTDHRLKM-NFALTSFLDGALEDAVQACAALEQ 403


>gi|149195429|ref|ZP_01872512.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
 gi|149134434|gb|EDM22927.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
          Length = 355

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 107/338 (31%), Positives = 181/338 (53%), Gaps = 9/338 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V++ + +N K   P + +++ +   L RE + L+  ++  KE ++ L +      +  + 
Sbjct: 10  VEKYNEINQKLSSPEITKDIKQMTKLSREARSLEEIVNKAKEYEELLNNLEEAKMMLDDA 69

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    ++    ++E +    L      D  + +LE+ AG GG E+  +   L+
Sbjct: 70  EMSELAKEEIKEIEEKLPKLEEEIKLLLLPKDPNDDKNIFLEIRAGTGGDEAALFVGDLM 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+A+ + +K E +     +  G K   LLIKG  AY  LK E G HR+ RI   +S
Sbjct: 130 KAYLRYADNKGWKVEIVSESKNDIGGYKEIILLIKGEGAYSRLKYEGGTHRVQRIPATES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P V D ++IE+   D +I+  RA GAGGQHVN T+SAVR+THIPTG
Sbjct: 190 QGRIHTSAVTVAVMPEV-DDVDIELDPKDIKIEVMRAGGAGGQHVNKTESAVRMTHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + V  Q ERSQ +NK +A  +L+A++Y  E  ++E +  IG+  K+++G G    +IR+Y
Sbjct: 249 ITVSMQDERSQQRNKEKALQILKARVY--EKLEKERLEKIGKERKSQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
              P   + D R  +       +++  L D+ +   +A
Sbjct: 307 NY-PQNRITDHRIGLTLYRLEQIMNEGLFDEIIDPLIA 343


>gi|15611143|ref|NP_222794.1| peptide chain release factor 1 [Helicobacter pylori J99]
 gi|7388059|sp|Q9ZMZ0|RF1_HELPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4154581|gb|AAD05656.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Helicobacter pylori J99]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSVEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K   +LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|167644945|ref|YP_001682608.1| peptide chain release factor 1 [Caulobacter sp. K31]
 gi|167347375|gb|ABZ70110.1| peptide chain release factor 1 [Caulobacter sp. K31]
          Length = 334

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 113/321 (35%), Positives = 173/321 (53%), Gaps = 6/321 (1%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E   L +E   L      ++ +     +   L E+  + +  +++ +    L     
Sbjct: 6   DGAEIVKLSKEHAELRPVAEAVQALAKLAAERADLEEMTADPEMAAMVSDEIQALDEKLP 65

Query: 98  EVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
            +E +    L   + D N  A LEV AG GG E+  +A  L RMY R+A+ + +K E   
Sbjct: 66  VMERELALMLAPRDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQLQGWKVEVDS 125

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           + +GE  G K     + G   +G  K E GVHR+ R+   ++  R HTS +++ V P   
Sbjct: 126 VSEGEMGGYKEIIASVTGDGVFGRWKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEA- 184

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +EIEI+++D RIDTYR+SGAGGQHVN TDSAVRITH+PTGVVV    E+SQH+N+A+A
Sbjct: 185 EDVEIEINDADIRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSS-EKSQHQNRARA 243

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
              L+A+LY+L+    +   +    S+   G    +IR+Y   P   V D R N+   + 
Sbjct: 244 MKNLKARLYDLQRTALDTARSDARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTVYNL 302

Query: 336 SDVLDGD-LDDFMKATLAIKK 355
             V++GD LDD +K  +A  +
Sbjct: 303 PKVMEGDALDDIIKPLIAEDQ 323


>gi|229816317|ref|ZP_04446624.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
 gi|229808073|gb|EEP43868.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
          Length = 355

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 119/340 (35%), Positives = 182/340 (53%), Gaps = 13/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  K  DP +  ++ E   L +E  H  + +   +E    L D  +  E+
Sbjct: 5   LEKIIIAFEELEKKLSDPAVASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIDVAKEM 64

Query: 76  ---ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              A++ D+  +LQ E S+N  ++    E  +   +     D  D  +E+ + AGG E+ 
Sbjct: 65  LHDAVDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E +K+K   L+    E  G KS    ++G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYQRFIESKKWKMTVLDSSPSEAGGFKSIEFKVEGDKVYSVMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+I+I+++D R+DTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLPEA-DEIDIQINQADLRVDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q++RSQ +N+     MLRA+LYE+EL+K++  A +G     +IG    
Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERSAQIGHGNR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
             +IR+Y L P   V D R     ++ + VL GD L D +
Sbjct: 302 SEKIRTYNL-PQDRVTDHRIGF-NSTYNGVLLGDQLSDVI 339


>gi|15902968|ref|NP_358518.1| peptide chain release factor 1 [Streptococcus pneumoniae R6]
 gi|116517153|ref|YP_816384.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|148994243|ref|ZP_01823536.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|148998842|ref|ZP_01826278.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|149003880|ref|ZP_01828703.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|149006296|ref|ZP_01830008.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|149012959|ref|ZP_01833848.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|168488841|ref|ZP_02713040.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|168491915|ref|ZP_02716058.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|168494449|ref|ZP_02718592.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|168576251|ref|ZP_02722145.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|182683968|ref|YP_001835715.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|221231773|ref|YP_002510925.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854521|ref|YP_002736033.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225856675|ref|YP_002738186.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|225858811|ref|YP_002740321.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|237650077|ref|ZP_04524329.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974]
 gi|237822154|ref|ZP_04597999.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303255576|ref|ZP_07341627.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|303260464|ref|ZP_07346432.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|303262821|ref|ZP_07348758.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265291|ref|ZP_07351201.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|303266498|ref|ZP_07352385.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|303268383|ref|ZP_07354179.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|307067803|ref|YP_003876769.1| protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|307127431|ref|YP_003879462.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|32171541|sp|Q8DPZ4|RF1_STRR6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122278730|sp|Q04KR4|RF1_STRP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691157|sp|B2IPH6|RF1_STRPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790899|sp|C1C6Z5|RF1_STRP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790900|sp|B8ZPH1|RF1_STRPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790902|sp|C1CE12|RF1_STRZJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790903|sp|C1CK98|RF1_STRZP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15458532|gb|AAK99728.1| Peptide chain release factor I [Streptococcus pneumoniae R6]
 gi|116077729|gb|ABJ55449.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|147755269|gb|EDK62320.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|147758110|gb|EDK65114.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|147762073|gb|EDK69035.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|147763112|gb|EDK70053.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|147927384|gb|EDK78415.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|182629302|gb|ACB90250.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|183572574|gb|EDT93102.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|183573754|gb|EDT94282.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183575581|gb|EDT96109.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183577929|gb|EDT98457.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|220674233|emb|CAR68768.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225720924|gb|ACO16778.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|225723680|gb|ACO19533.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225724367|gb|ACO20219.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|301794156|emb|CBW36566.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104]
 gi|301801854|emb|CBW34572.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200]
 gi|302597432|gb|EFL64527.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|302636019|gb|EFL66517.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638376|gb|EFL68843.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|302642104|gb|EFL72455.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|302643949|gb|EFL74209.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|302645156|gb|EFL75393.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|306409340|gb|ADM84767.1| Protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|306484493|gb|ADM91362.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|332073352|gb|EGI83831.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570]
 gi|332075368|gb|EGI85837.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301]
 gi|332075634|gb|EGI86102.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545]
 gi|332202882|gb|EGJ16950.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901]
          Length = 359

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|15644707|ref|NP_206877.1| peptide chain release factor 1 [Helicobacter pylori 26695]
 gi|2500136|sp|P55998|RF1_HELPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2313158|gb|AAD07148.1| peptide chain release factor RF-1 (prfA) [Helicobacter pylori
           26695]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|308061372|gb|ADO03260.1| peptide chain release factor 1 [Helicobacter pylori Cuz20]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|255324516|ref|ZP_05365633.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298422|gb|EET77722.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
          Length = 358

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 183/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I    E+     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQAREDLADAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ D    QE +D L++    +E K  + L    E DS D  +E+ AGAGG E+  +A
Sbjct: 68  AYEDHD---FQEEADRLEKSVENLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+A+K  F  E L +++ +  G+K  T+  +        A+   K E GVHR
Sbjct: 125 GDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           VRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A     S    +  
Sbjct: 245 VRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL+GD++D +KA    ++
Sbjct: 305 SERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQER 350


>gi|114569197|ref|YP_755877.1| peptide chain release factor 1 [Maricaulis maris MCS10]
 gi|119361557|sp|Q0ARZ8|RF1_MARMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114339659|gb|ABI64939.1| bacterial peptide chain release factor 1 (bRF-1) [Maricaulis maris
           MCS10]
          Length = 357

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 173/346 (50%), Gaps = 13/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   +  +        +  E   L +E   L         ++    +   L E+
Sbjct: 8   LAQVIDRFDQVEARLGAAG---DADEIVKLSKEHAELKPVAEKANALKSARAELAELAEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            +E DD  + +   +    +K  +   +       L   + DS +A +E+ AG GG E+ 
Sbjct: 65  -MEGDDAEMAEMAREEFYALKERLPELEHAMSLMLLPKDKDDSANAMIEIRAGTGGDEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+A+ + +  E +   +GE  G K     I G   +G LK E GVHR+ 
Sbjct: 124 IFAGNLYGMYQRYAQLQGWSWELVSASEGEHGGYKEVVAAISGNGVFGRLKFESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + I+IE+   D R+DT RASGAGGQHVN TDSAVR
Sbjct: 184 RVPATESQGRIHTSAATVAIMPQP-EDIDIELDMGDVRVDTMRASGAGGQHVNKTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +THIPTG+VV CQ E+SQH+N+A+A  +L+AKLY+++ +            +   G    
Sbjct: 243 MTHIPTGLVVVCQ-EKSQHQNRARAQEILKAKLYDMQREAANAERAAERKGQIGSGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +IR+Y   P   V D R N+      D++ GD LD+ + A +A  +
Sbjct: 302 RIRTYNY-PQGRVSDHRINLTLYKLDDIVAGDGLDEVVAALIAEDQ 346


>gi|170742857|ref|YP_001771512.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
 gi|226739116|sp|B0UAV4|RF1_METS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168197131|gb|ACA19078.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
          Length = 359

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +           +      L RE   LD+ ++ I+  +    +    +E 
Sbjct: 9   LDAILARHDIVTATLSAGE--ADSESFVQLSRELSDLDDVVAAIRAYRAAEAELRG-VEA 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L+E D  +    ++    ++   +      Q   L    AD   A LE+ AG GG E+ 
Sbjct: 66  MLQEGDPEMRALAAEEKPEVEAARDAAAKALQIMLLPKDAADEKSAILEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+A+ + +K E +    G   G +     +KG   +  LK E G HR+ 
Sbjct: 126 LFAGDLLRMYARYADLKGWKIEVVSESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I ++E+D +IDT RA GAGGQHVN T+SA+R
Sbjct: 186 RVPETETQGRIHTSAATVAVLPEA-EEVDIHVNEADLKIDTMRAQGAGGQHVNKTESAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIP+G+VV  Q+ERSQHKN+A+A  +LRA+LYE E  +++        ++   G    
Sbjct: 245 ITHIPSGIVVFVQEERSQHKNRARAMAVLRARLYEQERSQKDAARAADRRAQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
           +IR+Y   P   V D R N+      +VL G  LD+ + A + 
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELVDALVT 346


>gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake]
 gi|119361538|sp|Q3YS23|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis
           str. Jake]
          Length = 359

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 186/351 (52%), Gaps = 16/351 (4%)

Query: 13  LFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            FD   +   Q+   L +  EDP     V       +E   L   IS I +      D  
Sbjct: 2   SFDSNLEELYQKFCKLKSILEDPSQLS-VDSFVAASKEYSELLPVISVIDQYNSLQKDIA 60

Query: 71  ILLELALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGA 125
            L EL    E D  +     +     + ++       +   +     D+ +A LE+ AG 
Sbjct: 61  DLEELINNPETDHELKSLAKEEFYERQKQLPKIKNKLKLSLIPKDRDDARNAILEIRAGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +   L RMYT++AE++ +K E +        G K  +L I G N +  LK E 
Sbjct: 121 GGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSLCISGSNVFARLKFES 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +++ R HTS +++ V P + + ++++I E D RID YR+SG GGQ VNT
Sbjct: 181 GVHRVQRVPETEASGRLHTSAATVAVLPEI-EEVDLKIDEKDLRIDVYRSSGPGGQSVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIP+G+VV  Q E+SQHKNK +A  +LRA+LY LE  K++  + I +  K++
Sbjct: 240 TDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLE--KQKRDSEISQMRKSQ 297

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           IG G    +IR+Y   P   + D R N+      D++ +G+LD+F+ A +A
Sbjct: 298 IGSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGNLDEFIDALIA 347


>gi|91205113|ref|YP_537468.1| peptide chain release factor 1 [Rickettsia bellii RML369-C]
 gi|119361596|sp|Q1RJT5|RF1_RICBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91068657|gb|ABE04379.1| Peptide chain release factor RF-1 [Rickettsia bellii RML369-C]
          Length = 357

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 121/321 (37%), Positives = 181/321 (56%), Gaps = 12/321 (3%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLE 98
            E     +E   L++ +  IKE      +         E   D + L+   + ++ ++  
Sbjct: 31  EEFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDS 90

Query: 99  VEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +       L   EADS  A +E+ AG GG E+  +A  L  MY R+AE + ++ E 
Sbjct: 91  LPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEI 150

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L I +    G K  +  IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P 
Sbjct: 151 LSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPE 210

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V + ++I++ E D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  Q E+SQHKNKA
Sbjct: 211 V-EDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKA 269

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
           +A  +LRA++YE E +K+++      + + +IG G    +IR+Y   P   V D R N+ 
Sbjct: 270 KALKILRARIYEEERRKKDQ--ERANNRRKQIGSGDRSERIRTYNF-PQGRVSDHRINLT 326

Query: 332 KTSPSDVLDGDLDDFMKATLA 352
                +V++G LD+F++A +A
Sbjct: 327 LYKIDEVINGQLDEFIEALIA 347


>gi|94496666|ref|ZP_01303242.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
 gi|94424026|gb|EAT09051.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
          Length = 361

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 181/345 (52%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +        L     +   L +E   ++   +  +E++    +   L E+
Sbjct: 8   IAQIEARRDEVQASMTRADLA--PDQFVRLSKEYAEIEPVAAAARELRRLRQELAAL-EM 64

Query: 76  AL--EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTE 129
               EE D ++     + +Q +K ++   +     + L    AD+  A LE+ AG GG E
Sbjct: 65  MTGGEEADPAMRDMAQEEMQLLKSQLPAAERALALQLLPRDAADARPAMLEIRAGTGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A+ + +K E L  +  E+ G K     I G   +  LK E GVHR
Sbjct: 125 AALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASINGAGVFAKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++++I+++D +ID YRASGAGGQHVNTTDSA
Sbjct: 185 VQRVPVTESGGRIHTSAATVAVLPEP-EEVDVQIADADLKIDIYRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGW 308
           VRITH+PTG+VV  Q ERSQHKNKA+A  +LRA+LYE E ++ + E A   ++       
Sbjct: 244 VRITHVPTGIVVTQQDERSQHKNKAKAMQVLRARLYEAERERTQNEQAGARKAMVGSGDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
             +IR+Y   P   V D R N+      ++L+G  L + + A  A
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALTA 347


>gi|254488030|ref|ZP_05101235.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
 gi|214044899|gb|EEB85537.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
          Length = 371

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 173/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I+  +  L D      +
Sbjct: 27  LAQITQRFQFLEASMSAGS---DGADFAKLAKEYADLRPVVEQIEGYRQLLQDMDDARAM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    + E   Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 84  LKDPEMAELAEEELPRLKAEIPKAEASLQLALLPKDAADTKPAMLEIRPGTGGDEAALFA 143

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + +K + +E    E  G+K     IKG N +  LK E GVHR+ R+ 
Sbjct: 144 ADLLRMYQRYAEAQGWKFDLIEEQLTELGGVKEVVAHIKGQNVFARLKYESGVHRVQRVP 203

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I +  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 204 STESGGRIHTSAATVAVLPEA-EDVDIHVDPNDLRIDTMRSSGAGGQHVNTTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG+VV    E+SQH+N+  A  +L+A+LY+ E Q+ +   +   +++   G    +IR
Sbjct: 263 IPTGIVVTSS-EKSQHRNREIAMQVLKARLYDAERQRVDSERSADRAAQVGSGDRSERIR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       +L GDLD+ + A  A
Sbjct: 322 TYNF-PQGRMTDHRINLTLYRLDAILQGDLDEIIDALTA 359


>gi|258648524|ref|ZP_05735993.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
 gi|260851292|gb|EEX71161.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L++ +   K   + L +      L
Sbjct: 12  LDGLRSRFEEVSTLITDPSVIADQTRYVRLTKEYKELEDLMQARKRYAELLSNLQESKNL 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  + +   + +   + E+    E  +   +     D  +A LE+ AG GG E+ 
Sbjct: 72  LLTETDAELKELAREEVAACEAEIPTCEEQIKLMLVPKDPEDGKNAILEIRAGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G + YG LK E GVHR+ 
Sbjct: 132 LFAGDLFRMYAKFCESKGWKFEVSSANEGAVGGFKEVVASVTGADVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   ++ ++EI E + R +T+R+SGAGGQ+VN  +S VR
Sbjct: 192 RVPATETQGRVHTSAATVAVLPEA-EAFDVEIHEGEIRWETFRSSGAGGQNVNKVESGVR 250

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG      ++C + R Q KNK +A   LR  +Y+ E QK  ++IAN  ++ 
Sbjct: 251 LRYDWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYVDDIANRRKTL 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    +    +DGD+ D +   +  +
Sbjct: 311 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLPAFVDGDIQDCIDQLMVAE 361


>gi|308182253|ref|YP_003926380.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
 gi|308064438|gb|ADO06330.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
          Length = 352

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 173/340 (50%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|326561958|gb|EGE12292.1| peptide chain release factor 1 [Moraxella catarrhalis 103P14B1]
          Length = 319

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 109/317 (34%), Positives = 161/317 (50%), Gaps = 13/317 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    +  ++      D     EL
Sbjct: 9   LDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   D ++  +  +E  +       L     D   A+LE+ AG GG E+ 
Sbjct: 69  LS---DPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY ++ + + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V+    +EI+ SD RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVV +CQQERSQH NK +A  ML A++ + ++  + +I    +  +  +G G  
Sbjct: 246 ITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV--QAQIDATSDMRRNLVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKD 325
             +IR+Y   P   + D
Sbjct: 304 SERIRTYNF-PQGRMTD 319


>gi|203287654|ref|YP_002222669.1| peptide chain release factor A [Borrelia recurrentis A1]
 gi|201084874|gb|ACH94448.1| peptide chain release factor A [Borrelia recurrentis A1]
          Length = 359

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 129/341 (37%), Positives = 194/341 (56%), Gaps = 8/341 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +++  L  K +D +L +N  E   +++E  +L+       E Q  L       ++  E
Sbjct: 11  IEKKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILNQINENQKILSE 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ED+  +       +  +  + +  +       L   E D  +  +E+ AG GG E+  +A
Sbjct: 71  EDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEEAALFA 130

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MYT+++EK+K+KTE +  +  E  G K  +  IKG + +  LK E GVHR+ RI 
Sbjct: 131 HNLYEMYTKYSEKKKWKTELINFNKTELGGFKEVSFEIKGKDVFKKLKHESGVHRVQRIP 190

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +SN +  TS +++ V P V+D+ +IEI++ D R D YR+SGAGGQHVNTTDSAVRITH
Sbjct: 191 ITESNGKLQTSAATVAVLPEVEDT-DIEINDKDLRTDVYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+V QCQ ERSQHKNK QA  +LRA+LYELE L+K+E+ +N  +          +IR
Sbjct: 250 LPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQEQRSNDRKQQVGSGDRSERIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R NI      +++ G+LD  +  TLA+K
Sbjct: 310 TYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLN-TLALK 348


>gi|149019616|ref|ZP_01834935.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|168483091|ref|ZP_02708043.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|147930991|gb|EDK81971.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|172043551|gb|EDT51597.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|301799986|emb|CBW32576.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141]
 gi|332200609|gb|EGJ14681.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317]
          Length = 359

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354]
          Length = 355

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 172/340 (50%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + +  +     L     E     R+   L+       E++    +   L E+
Sbjct: 8   LDQIANRFAEIEARMASGQL--EGEEFVQASRDYAELEPVAKLALELKAAREEVAGLDEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E  + L +   E+E +   ++L    AD+  A LE+ AG GG E+  +A
Sbjct: 66  LADPEMRDMAEEELEALNQRIPELEQQLAVAMLPRDSADAKPAMLEIRAGTGGDEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A ++ +K E + +   E  G K     + G   +  LK E GVHR+ R+ 
Sbjct: 126 GDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAHVTGTGVFAKLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +++++   D +IDTYRASGAGGQHVNTTDSA+RITH
Sbjct: 186 ETESGGRIHTSAATVAVLPEP-DEVDVQVDPGDLKIDTYRASGAGGQHVNTTDSAIRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PTG+VV CQ  RSQHKN+ QA  +LRA+LYE +    +   A   ++         +IR
Sbjct: 245 LPTGLVVTCQDGRSQHKNREQAMQVLRARLYEQQRDAAQGAEAEARKAMVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
           +Y   P   V D R  +       ++ G  L + + A +A
Sbjct: 305 TYNF-PQGRVTDHRIGLTLQKLPQIIAGPGLGELVDALIA 343


>gi|119025459|ref|YP_909304.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486885|ref|ZP_02028292.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
 gi|229470348|sp|A1A0I9|RF1_BIFAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118765043|dbj|BAF39222.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084748|gb|EDN83793.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
          Length = 362

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 163/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +  +P +  N  + + L R    L   +S     +    D     E+A E
Sbjct: 12  ALEEYHNIEQQMAEPEVASNPDKMRKLGRRHAELGAIVSAYTAYKQVKDDLEAAREMASE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DPDFAEEAKRLEGELPAAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR +       +  E  G+K   L I+           +  LK E GVHR+ 
Sbjct: 130 RMYMRYAEKRGWSVTVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHIPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|224026398|ref|ZP_03644764.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
 gi|224019634|gb|EEF77632.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
          Length = 369

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 172/352 (48%), Gaps = 16/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP++  +      L +E + L + ++  KE    L        +
Sbjct: 11  LEGLVARFEEVSTLITDPNVIGDQKRYVKLTKEYKELGDIMAARKEYLQCLNGLEEAK-M 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + E+D  + +   +     +  +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 70  MMAENDPEMKEMAREEAAACEARIPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 IFAGDLFRMYSKYCESKGWKLEVSNANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGVV    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 249 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYIDDIASKRKTM 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359


>gi|311740614|ref|ZP_07714441.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304134|gb|EFQ80210.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 362

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 183/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I    E+     D     E+
Sbjct: 12  VDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQAREDLADAKEM 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ D    QE +D L++    +E K  + L    E DS D  +E+ AGAGG E+  +A
Sbjct: 72  AYEDHD---FQEEADRLEKSVESLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+A+K  F  E L +++ +  G+K  T+  +        A+   K E GVHR
Sbjct: 129 GDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSA
Sbjct: 189 VQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           VRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A     S    +  
Sbjct: 249 VRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDR 308

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL+GD++D +KA    ++
Sbjct: 309 SERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQER 354


>gi|323345650|ref|ZP_08085873.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
 gi|323093764|gb|EFZ36342.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
          Length = 370

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 93/352 (26%), Positives = 156/352 (44%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +     L       EL
Sbjct: 11  LDGLESRYEEVSTLITDPDVINDQQRYVKLTKEYKDLGDIMEARRRYIACLNAIQEAKEL 70

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +       E  +   +     D  +  +E+ AG GG E+ 
Sbjct: 71  LANESDADMKEMAREELATNEALQPKLEEEIKLALVPKDPEDEKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ + + +        +G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKKYCDSKGWTLSVTSESEGAVGGFKEIDFAVSGANVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK  ++IAN  +S 
Sbjct: 250 LRYPWRNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIANRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R           L G++ + + A    +
Sbjct: 310 VSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFLGGNIQEMIDALTVAE 360


>gi|255010031|ref|ZP_05282157.1| putative peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 319

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 126/315 (40%), Positives = 189/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +   +E      QE  +   +    VE  + +
Sbjct: 1   MKLVKGLQKWIDGYNEVKTLADELELAFDFYKDE--LVTEQEVDEAYAKALEHVENLELQ 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG ++ F+KA L 
Sbjct: 298 VMDGKIEGFIKAYLM 312


>gi|65317305|ref|ZP_00390264.1| COG0216: Protein chain release factor A [Bacillus anthracis str.
           A2012]
          Length = 323

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 110/317 (34%), Positives = 170/317 (53%), Gaps = 11/317 (3%)

Query: 46  MRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EY 101
           ++    +   +   +E +D    L D   +LE  L+ +   +++E    L+  +  + E 
Sbjct: 3   IQRNXDIQETVEVYREYKDVREXLKDAKAMLEDKLDAEMREMVKEEVSELESQEKTLSER 62

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +   +     D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E    E
Sbjct: 63  LKILLVPKDPNDDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTE 122

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K    +I G  A+  LK E G HR+ R+   +S  R HTS +++ V P   + +EI
Sbjct: 123 LGGYKEIIFMINGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEA-EEVEI 181

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I E D R+DT+ +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LR
Sbjct: 182 DIHEKDVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLR 241

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A++Y+    ++E  A   ++ K  +G G    +IR+Y   P   V D R  +       +
Sbjct: 242 ARVYD--KFRQEAQAEYDQNRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQI 298

Query: 339 LDGDLDDFMKATLAIKK 355
           L G LDDF+ A +   +
Sbjct: 299 LQGKLDDFINALVMEDQ 315


>gi|229818480|ref|ZP_04448761.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
 gi|229784350|gb|EEP20464.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
          Length = 362

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 16/345 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
            A++    L  +   P +  +  + + L R    L + ++  K       D     E+A 
Sbjct: 11  AALKEYQSLEEQMASPEVVTDPNKMRKLGRRHAELGSIVTAYKAYLAVKNDLEAAREMAS 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E  D     E       +    E  +   +     D+ D  +E+ AG GG E+  +A  L
Sbjct: 71  E--DPDFAAEAKRLESELPDVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDL 128

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSA--TLLIKG-----PNAYGWLKGEQGVHRL 190
           LRMYTR+AEKR +       +  E  G+K     +  KG        +  LK E GVHR+
Sbjct: 129 LRMYTRYAEKRGWTVSVQSENTTELGGVKDVQVAIRAKGTPAPEDGVWASLKYEGGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSA 249
            R+   +S  R  TS + + V+P  DD  +       D +ID + +SG GGQ VNTT SA
Sbjct: 189 QRVPVTESQGRIQTSAAGVIVFPEADDDNDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--- 306
           VR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++   
Sbjct: 249 VRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSL 306

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 307 DRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|315497942|ref|YP_004086746.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
 gi|315415954|gb|ADU12595.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
          Length = 358

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 16/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +  + E      +  E   L +E   L   +  +  +         L EL
Sbjct: 9   LDQVVDRFRMIEARMESAT---DGTEIVKLSKEHAELKPVVDAVTALLKARASGPELEEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSN---DAYLEVHAGAGGTESQ 131
               +D  +     +  Q +K  +   +   +LL    D +    A LEV AG GG E+ 
Sbjct: 66  IAL-NDPELSPLAQEEFQELKERLPELERGVALLLAPKDKDENASAILEVRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+A  + ++ E   I +G+  G K     + G   +G LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAASQGWRVEIDSISEGDAGGYKEIIASVTGDGVFGKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +EI+I + D RIDTYRASG+GGQHVN TDSAVR
Sbjct: 185 RVPATEAGGRIHTSAATVAVLPEA-EDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+V     E+SQH N+  A   L+A+LY+++   +   A   ++ K+++G G  
Sbjct: 244 ITHLPTGIVATSS-EKSQHMNRQIAMRNLKARLYDIQR--QALDAARSDARKSQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+   + S  ++G++D  + A +A  +
Sbjct: 301 SERIRTYNY-PQGRVSDHRINLTLYNLSQFMEGEMDQMINALIADDQ 346


>gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238054477|sp|B3CL87|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 127/347 (36%), Positives = 189/347 (54%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++ S +    E+P       E     +E   L   I  I E      +   L E+
Sbjct: 7   LQDLKKKFSDVERNLENPTNLS-QKEFVSFSKEYSELRPIIEIIDEYNILKEEISDLEEI 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +E+ D  I +   + L   +  V        +   L   E DS +A LE+ AG GG E
Sbjct: 66  MKDENSDGDIKELAKEELLEKQKIVLPKVKAKLKLALLPKDEDDSRNAILEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E GVHR
Sbjct: 126 AALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S+ R HTS +++ + P V + ++ EI E D RID YR+SG GGQ VNTTDSA
Sbjct: 186 VQRVPETESSGRLHTSAATVAILPEV-EEVDFEIEEKDLRIDVYRSSGPGGQSVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E         K++IG G
Sbjct: 245 VRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKE--MERSTMRKSQIGSG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   + D R N+       ++ +G+LD+F++A ++
Sbjct: 303 DRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 348


>gi|191166656|ref|ZP_03028484.1| peptide chain release factor 1 [Escherichia coli B7A]
 gi|190903305|gb|EDV63026.1| peptide chain release factor 1 [Escherichia coli B7A]
          Length = 321

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 112/307 (36%), Positives = 167/307 (54%), Gaps = 9/307 (2%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE----VEYKQFE 105
             L +      + Q    D      +    DD  + +   D L+  K +     +  Q  
Sbjct: 4   ASLSDVSRCFTDWQQVQEDIETAQMML---DDPEMREMAQDELREAKEKSEQLEQQLQVL 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            L     D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G 
Sbjct: 61  LLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGY 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K     I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ 
Sbjct: 121 KEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++
Sbjct: 181 ADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIH 240

Query: 286 ELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
             E+ KR++  A+   +         + R+Y   P   V D R N+      +V++G LD
Sbjct: 241 AAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 299

Query: 345 DFMKATL 351
             ++  +
Sbjct: 300 MLIEPII 306


>gi|251799802|ref|YP_003014533.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
 gi|247547428|gb|ACT04447.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
          Length = 356

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 178/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   L+    DP +  +    +   +E+  L  A     E +    +L D
Sbjct: 1   MLDRLQALADRYEKLSELLCDPDVASDPKRLREYSKEQSDLQEAYEAFTEYKQVSEQLED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
             ++    L+++   +++   D L   K  ++ K +   L     D  +  +E+   AGG
Sbjct: 61  AKLMQGEKLDDEMREMVKMEIDELTERKTALDEKIRIVLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++A+ + ++ E +++++ +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAYELYRMYTKFADAQGWRCELMDLNENDLGGFKEVIFMITGKGAYSKMKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S+        + +E+EI + D RIDT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPVTESGGRIHTSTST-VSVMPEVEEVEVEILDKDIRIDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ H+PTG++  CQ  +SQ++NKA+A  +LRA++ ++    +EE A      K ++G
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARISDIRR--QEEEAKYAGERKLKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++GD+ + + +    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSVMNGDMAEIVSSLTIAEQ 347


>gi|27904663|ref|NP_777789.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|29427417|sp|P59456|RF1_BUCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27904060|gb|AAO26894.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 362

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 106/338 (31%), Positives = 174/338 (51%), Gaps = 3/338 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   + +   D  +  N  + + L +E   L +      + ++   D +    L
Sbjct: 9   LESLHRRYEEIESMLSDRTVISNQEKFRELSQEYLKLSDINYCFVQWKNCNHDVIETKLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            L+ +   + ++    L +   ++E   Q   L     D  + +LE+ + +GG E+  ++
Sbjct: 69  LLDSELHDVAEQELQMLSKKMKKIETEIQVLLLPCDPNDQQNCFLEIRSASGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY +++E + +KT  + +    + G K   + I G  +YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYIKYSEFQNWKTNIIHMTHSLKGGYKDIIVKITGKGSYGKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS   + V PVV      +++ +D +IDT+R+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRVHTSTCIVAVIPVVPKKEIEKVNINDLKIDTFRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IP+G VV+CQ ERSQHKNKA+A ++L +++   EL  + +   I        G    + R
Sbjct: 249 IPSGQVVECQDERSQHKNKAKALSVLVSRIKAAELYNQRKKNAIQRRDLLGTGMRSDRNR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y       V D R N+      +VLDG LD  ++  +
Sbjct: 309 TYNFA-QNRVTDHRINLVVYCLDEVLDGKLDVLIEPII 345


>gi|307706536|ref|ZP_07643343.1| peptide chain release factor 1 [Streptococcus mitis SK321]
 gi|307617991|gb|EFN97151.1| peptide chain release factor 1 [Streptococcus mitis SK321]
          Length = 359

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASSRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E ++   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDLDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|330840796|ref|XP_003292395.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
 gi|325077351|gb|EGC31069.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
          Length = 330

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 123/314 (39%), Positives = 186/314 (59%), Gaps = 5/314 (1%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++E   L   I     + +   D   ++E++ +E D  +L E+ + L  +       +  
Sbjct: 18  IKEYNSLKAVIDEFNSLNNSFKDYQEIVEMSKKEGDQEMLNESRNLLNSLYSICTDLEIN 77

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            L+ GE D N  ++EVHAG GG +S DW  ++ +MY  WAE++ F+   +E   GE  G+
Sbjct: 78  VLMIGEEDDNSCFIEVHAGVGGADSMDWTEIIHKMYINWAERKGFQVSIIESIPGEF-GL 136

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           + ATL I G NAYGWL+ E G+H+L+RISP+  + +RHTSF+S+ VYP  D+SI +++  
Sbjct: 137 RRATLKIDGKNAYGWLRTEMGIHKLIRISPFSPDFKRHTSFASVVVYPSSDNSINVDLKP 196

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D +I+  R+SGAGGQHVNTT+SAVRI HIPT + V C  ERSQH+NKA   ++L+ K++
Sbjct: 197 NDLKIEFTRSSGAGGQHVNTTESAVRIVHIPTNISVFCSSERSQHQNKAIGLDLLKTKIF 256

Query: 286 ELELQKREEIANIGESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342
              L  + E            G   G  +RSY + P + VKD RT  E +  S +L+GD 
Sbjct: 257 RHYLSIKNEKEKKFRDELGTNGFASGNIVRSYTMHPQERVKDQRTGFETSQLSKILEGDE 316

Query: 343 -LDDFMKATLAIKK 355
            LD  +K  L++ +
Sbjct: 317 ELDKMIKLALSVSQ 330


>gi|254476963|ref|ZP_05090349.1| peptide chain release factor 1 [Ruegeria sp. R11]
 gi|214031206|gb|EEB72041.1| peptide chain release factor 1 [Ruegeria sp. R11]
          Length = 351

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 177/342 (51%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     D    +++     L +E   L      I   +  L D     ++
Sbjct: 7   LEQILQRFQYLEAAMSDGASGEDIA---ALAKEYSDLRPVAEQIISYRRLLADLDEAEQM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E    L+    E E   Q   L    ADS  A LE+  G GG E+  +A
Sbjct: 64  LADPDMAALAEEELPGLRAALPEAEQALQLALLPRDAADSKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + +  E +E    E  G+K     +KG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEAQGWTFEIIEEQSTELGGLKEVVAHVKGNNVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I  +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLPEA-EEVDLRIDPADLRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IPTG++V    E+SQH+N+  A  +LR +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 243 IPTGIIVVSS-EKSQHRNREIAMQVLRTRLYDLERQRIDSERSADRASQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 302 TYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342


>gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [Mycobacterium kansasii ATCC 12478]
          Length = 357

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 116/333 (34%), Positives = 169/333 (50%), Gaps = 11/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N   A+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHADLEHALSDPELHSNPGAARKAGRRFALLAPIVATHRKLVAAREDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A    D S + E    L+    E++ +  + L      D++D  LEV +G GG ES  +A
Sbjct: 68  AA--SDDSFVAEA-AELEARVAELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHR 189
             L RMY R+AE+R +    L+    +  G K ATL I          +  +K E GVHR
Sbjct: 125 ADLARMYIRYAERRGWTVTVLDETTSDLGGYKDATLAIASKGDSVDGVWSRMKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   +  
Sbjct: 245 VRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQSMAEEQALADASADRASQIRTVDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             +IR+Y   P   + D R   +  +   VLDG
Sbjct: 305 SERIRTYNF-PENRITDHRIGYKAYNLDQVLDG 336


>gi|239787352|emb|CAX83829.1| Peptide chain release factor RF-1 [uncultured bacterium]
          Length = 354

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 182/351 (51%), Gaps = 23/351 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            D  ++R   L  + E      +  +   L +E   L+N        K +  +  D  I+
Sbjct: 7   LDQIIERYLDLQKQLEQE--VCDPKKFAGLSKEYAGLENIYQTILNYKSLLQQKADAEIM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L       D  + Q   + L  +KL  E      +   L     D   A LE+ AG GG 
Sbjct: 65  L------TDPGMRQLAEEELGALKLATEETWQMLRVLLLPKDVDDERSAILEIRAGTGGD 118

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L+RMY R+A    ++ + L + +     +K A + I G   +  LK E GVH
Sbjct: 119 EAGLFAADLMRMYQRYAAIHGWQFDVLGLSETGLGSVKEAQVGIVGKGVFAKLKFESGVH 178

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ V P V + ++IEI + D RID  RASGAGGQHVNTTDS
Sbjct: 179 RVQRVPETESSGRVHTSAATVAVLPEV-EDVDIEIKDEDLRIDICRASGAGGQHVNTTDS 237

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV  Q ERSQHKNKA+A  ++RA+LY+L   KRE+        K+++G 
Sbjct: 238 AVRLTHLPTGLVVAQQDERSQHKNKAKAMKIMRARLYDLR--KREQDEVRAADRKSQVGS 295

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       V+ G+ LD+ +   +A  +
Sbjct: 296 GDRSERIRTYNF-PQGRVTDHRINLTLYKLDQVMQGEALDELIDNLIADDQ 345


>gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Nocardia farcinica IFM 10152]
 gi|61214587|sp|Q5Z0Z2|RF1_NOCFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54014529|dbj|BAD55899.1| putative peptide chain release factor 1 [Nocardia farcinica IFM
           10152]
          Length = 356

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 122/331 (36%), Positives = 176/331 (53%), Gaps = 11/331 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L T+  DP L  +   A+ + +    L   ++  ++++    D     EL
Sbjct: 7   IDDILAEHAGLETQLADPTLHNDPSAARRVGKRFAELAPIMATYRKLESARADLTAAREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD S   E    L+R   E+E    + L      D +D  LEV +G GG ES  +A
Sbjct: 67  AA--DDASFAAEV-PELERQVDELEQALADLLAPRDPHDGDDVVLEVKSGEGGEESALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+AE+R ++ E L+    +  G K ATL IK         +   K E GVHR
Sbjct: 124 ADLARMYMRYAERRGWRVEVLDATVSDLGGYKEATLSIKSRDAARDGVWSRFKFEGGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  D+  E++I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 184 VQRVPVTESQGRIHTSAAGVLIYPEPDEVAEVQIDESDLRIDVYRSSGKGGQGVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++ E+ A  G +S+   +  
Sbjct: 244 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEQEAAAGRASQIRTVDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             +IR+Y   P   + D R   +  +   VL
Sbjct: 304 SERIRTYNF-PENRITDHRIGYKSHNLDAVL 333


>gi|317011921|gb|ADU82529.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75]
          Length = 352

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345


>gi|297181249|gb|ADI17443.1| protein chain release factor a [uncultured Rhodospirillales
           bacterium HF0070_31K06]
          Length = 357

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 128/349 (36%), Positives = 189/349 (54%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ + R + L        L  +  +     +E   L   +   +E++    +   L EL
Sbjct: 7   LDSVISRHAELAALMASGDL--DAGQYADYSKEYAELSPVVEKAQELKSLREELGGLEEL 64

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             + E D  + +      Q ++ +V    E  +   L    AD   A LE+ AG GG E+
Sbjct: 65  LADPETDSEMKELAEAERQELRDQVPDIEESLRILLLPKDAADEKSAILEIRAGTGGDEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L+RMY R+AE   ++TE L++ + E  G+K A L I G   +  LK E GVHR+
Sbjct: 125 ALFASDLMRMYQRYAEMHGWRTEFLDLSETELGGVKEAALSIAGRGVFARLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   DS  R HTS +++ V P   + ++I+I  SD R+DTYRASGAGGQHVN TDSA+
Sbjct: 185 QRVPTTDSGGRIHTSAATVAVLPEA-EEVDIQIDTSDLRVDTYRASGAGGQHVNKTDSAI 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VVQCQ E+SQHKN+A+A  +LRA+LY+ E   +   A      KT++G G 
Sbjct: 244 RITHLPTGIVVQCQDEKSQHKNRAKAMKVLRARLYDHER--QTLDAERAADRKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +L GD LD+ +   +A  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLDRILAGDELDEVVDLLIAEDQ 349


>gi|153809227|ref|ZP_01961895.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
 gi|149128203|gb|EDM19423.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
          Length = 319

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 128/315 (40%), Positives = 190/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   IS   E++    +  +  +   EE      ++      +    VE  + +
Sbjct: 1   MKLVKDLQKWISGYNEVKTLADELELAFDFYKEE--LVTEEDVDAAYAKASEAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNIET 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 ARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKMKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +D F+KA L 
Sbjct: 298 VMDGKIDGFIKAYLM 312


>gi|33519808|ref|NP_878640.1| peptide chain release factor 1 [Candidatus Blochmannia floridanus]
 gi|81666793|sp|Q7VR74|RF1_BLOFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33504153|emb|CAD83415.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           floridanus]
          Length = 358

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 116/332 (34%), Positives = 182/332 (54%), Gaps = 3/332 (0%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +  QR   L     + +   N  E   L +E  +L   I + +E  +   + +   ++  
Sbjct: 11  SLKQRFYKLEKSLNNFNTINN-KEFYSLSKEHTYLHEIIKYFEEWLNIQKNIVHTKDMLS 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           + D   I+Q+    L   K  +E K    L S   D  + ++E+ AG GG E+  +A  L
Sbjct: 70  DIDMHDIVQDELKILNTSKHNLENKIKILLFSDPQDQYNCFIELRAGTGGKEAAIFAGEL 129

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+ E +++  E +    GE  G K   + +    +YG LK E G HR+ RI   +
Sbjct: 130 FRMYSRYIEMQRWNMEIIHATYGECGGYKEIIIKVPVHGSYGQLKFESGGHRVQRIPNTE 189

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  +I V P + ++I  EI+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+
Sbjct: 190 SQGRIHTSTCTIAVIPNIPNAILPEINSNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYV 316
           G+ V+CQ ERSQHKNK++A ++L+++LY + + QK++E +N+  +         +IR+Y 
Sbjct: 250 GLSVECQDERSQHKNKSKALSVLKSRLYAINIKQKQQEESNVRRNLIGTGDRSDRIRTYN 309

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            Q    V D R         D+++G LD  ++
Sbjct: 310 FQ-QGRVTDHRIAFTSYKLHDIMNGKLDILIQ 340


>gi|296127053|ref|YP_003634305.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
 gi|296018869|gb|ADG72106.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
          Length = 358

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 112/353 (31%), Positives = 183/353 (51%), Gaps = 14/353 (3%)

Query: 12  GLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D  + V+     +  K  D ++ ++    + LM+++  +++ +   ++++  L +  
Sbjct: 2   SIIDKLSLVENTYEDIVQKLNDANI-KDNRVIQDLMKKKSEIEDIVEEYRKLKTVLKEID 60

Query: 71  ILLELALE-EDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGA 125
              E+    E D  + +     ++ +  + E      +   L   + D  +  +E+  G 
Sbjct: 61  DSNEMINNPETDKDLKEMALAEIEELNQKKEDIINSLRLLLLPKDKNDGKNIIIEIRVGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ES  +   L RMY+R+ E+   K E ++    E  G K     + G NAY  LK E 
Sbjct: 121 GGDESALFVGDLFRMYSRFIERANLKMEIIDTSPTELGGYKEVIFSVSGKNAYRALKFES 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ RI   +S  R HTS S++ V P   +S ++ I + D R+D +R+SG GGQ VNT
Sbjct: 181 GTHRVQRIPATESGGRIHTSASTVAVMPEAMES-DVVIKDEDIRVDIFRSSGPGGQSVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  + E  A   +  + +
Sbjct: 240 TDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKE--EAERKAKEAKERREQ 297

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IG G    +IR+Y   P   V D R N+        +DG++ +   A    ++
Sbjct: 298 IGSGDRSERIRTYNF-PQNRVTDHRINLTLYKLDRFMDGEITEITDALFKKEQ 349


>gi|157827554|ref|YP_001496618.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
 gi|166223596|sp|A8GXI1|RF1_RICB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157802858|gb|ABV79581.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
          Length = 357

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 120/319 (37%), Positives = 177/319 (55%), Gaps = 8/319 (2%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLE 98
            E     +E   L++ +  IKE      +         E   D + L+   + ++ ++  
Sbjct: 31  EEFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDS 90

Query: 99  VEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +   +       L   EADS  A +E+ AG GG E+  +A  L  MY R+AE + ++ E 
Sbjct: 91  LPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEI 150

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           L I +    G K  +  IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P 
Sbjct: 151 LSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPE 210

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V + ++I++ E D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V  Q E+SQHKNKA
Sbjct: 211 V-EDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKA 269

Query: 275 QAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           +A  +LRA++YE E +K+++  AN             +IR+Y   P   V D R N+   
Sbjct: 270 KALKILRARIYEEERRKKDQERANNRREQIGSGDRSERIRTYNF-PQGRVSDHRINLTLY 328

Query: 334 SPSDVLDGDLDDFMKATLA 352
              +V++G LD+F++A +A
Sbjct: 329 KIDEVINGQLDEFIEALIA 347


>gi|89890298|ref|ZP_01201808.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
 gi|89517213|gb|EAS19870.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
          Length = 358

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/344 (28%), Positives = 167/344 (48%), Gaps = 8/344 (2%)

Query: 13  LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68
           + D  N V+ R   +N     P +  +      L +E + L            +   L +
Sbjct: 1   MIDKLNIVKNRFDEVNDLIIQPDIISDQKRYVQLTKEYKDLKALMEVREEYMTLTANLDE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              ++    + D   + Q   D  +    E+E K +   +     D+ +A +E+ AGAGG
Sbjct: 61  AKEIIADGSDADMVEMAQMQYDEAKEAIPELEEKIRMMLVPKDPEDAKNAVMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY ++   + + T  ++   G   G K   L + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYEKYCSSKGWSTSVVDTSHGTSGGYKEIILEVNGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   +  ++E+  ++ RI+   ++G GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEA-EEFDVELDMTEVRIERTTSTGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+++ H PTG++V CQ ++S HKN  +A  +LR++LYE+EL K+ E  +    S    G
Sbjct: 240 SAIKLHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYEMELAKKMEADSEKRKSMVSSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y       V D R N+      ++++GD+   +   
Sbjct: 300 DRSAKIRTYNYS-QGRVTDHRINLTLYDLDNIINGDIQKIIDEL 342


>gi|150397700|ref|YP_001328167.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
 gi|166223607|sp|A6UCF2|RF1_SINMW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150029215|gb|ABR61332.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
          Length = 360

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 175/344 (50%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----L 72
              +R   +  +    P           L  E   L   +S I+  +    +       L
Sbjct: 11  ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIGAML 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + A ++D   + +     ++     +E + Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADRATDKDMRDLAELEKPEIEERVEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYAAGKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+I+I   D R+DT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EDIDIDIRSEDIRVDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++LY++E   +   +      + ++G G  
Sbjct: 246 ITHLPTGLVVTSS-EKSQHQNRAKAMQVLRSRLYDMER--QRADSERSADRRNQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       V++G++D+ + A LA
Sbjct: 303 SERIRTYNF-PQGRLTDHRINLTIYKLDRVMEGEIDEIVDALLA 345


>gi|90420193|ref|ZP_01228101.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335527|gb|EAS49277.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 359

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + L  +    P           L  E   L+  ++ I+  Q    +      
Sbjct: 9   LDEILNRFALLEHEMSKGPE----HEVYTKLAAEYSGLEEVVAAIRTYQKAEQELAEARA 64

Query: 75  LALE-EDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  E      + +     +  +K ++E      +   L    AD   A LE+ AG GG+E
Sbjct: 65  ILDEPAAGRDMRELAEIEIDELKEQLETLTAEIRILLLPKDAADEKGAILEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE  ++K E +   +GE  G +     I+G   +  LK E GVHR
Sbjct: 125 AGLFAGDLFRMYQRYAEMNRWKVEIISASEGEVGGYREVIAAIRGVGVFSRLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + I++E+   D RIDT RASGAGGQHVNTTDSA
Sbjct: 185 VQRVPETESGGRIHTSAATVAVLPEA-EDIDVEVKTEDIRIDTMRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           VRITH+PTG+VV    E+SQH+N+A+A  +L+A+L+++E Q+ ++  +    S+   G  
Sbjct: 244 VRITHLPTGIVVTSS-EKSQHQNRARAMQVLKARLFDMERQRADDERSAARKSQVGSGDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       V++G++D+ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEMDELVDALIA 345


>gi|319407578|emb|CBI81228.1| peptide chain release factor 1 [Bartonella sp. 1-1C]
          Length = 359

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++  + P    N      L  E   L   I+ I+ +     +   L  + 
Sbjct: 11  QLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIAPIRTLNSLRKEIAELETII 66

Query: 77  LE-EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            + + D  +     + L  +  +++  + E     L    AD     +E+ AG GG+E+ 
Sbjct: 67  SDIQTDTEMRNLAQEELSSLSQKIQELEKELQILLLPKDIADEKSVIIEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLPEA-EEIDIEIRSEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E   +    ++   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDL++ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALIS 345


>gi|158334426|ref|YP_001515598.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
 gi|189039957|sp|B0C424|RF1_ACAM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158304667|gb|ABW26284.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
          Length = 363

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  ++ +    +     ++
Sbjct: 10  LKSVEQTFHELTRRLGDPEVATNPTEFQEVAKARASLEETVNTFEDWKATQQELADAQQM 69

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
           A + ++D  + +  +     +  +++  + +     L     D  +  LE+ AGAGG E+
Sbjct: 70  AKDGDEDPELKEMAAMEAAELTEKLDGLETKLKVLLLPRDPNDEKNIMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+R+Y+++AE +K++ + L    GE  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEIQGERVYSKLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P V D +EIEI   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEASGRVHTSTATVAVMPEV-DDVEIEIDPKDIEMSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE+EL  +E+ A++    ++++G G 
Sbjct: 249 DLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMEL--QEQQASVTSMRRSQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y  +      D R N +      VL GD++  ++  +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLN-QNFPLEKVLVGDIELILETCI 348


>gi|325954306|ref|YP_004237966.1| peptide chain release factor 1 [Weeksella virosa DSM 16922]
 gi|323436924|gb|ADX67388.1| Peptide chain release factor 1 [Weeksella virosa DSM 16922]
          Length = 362

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/345 (28%), Positives = 170/345 (49%), Gaps = 8/345 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67
           GL D      QR   +      P +  +      L +E   L + +   +E +   + L 
Sbjct: 5   GLLDKLRAIKQRFDEVADLIIQPDIITDQARYAKLNKEYSDLRDYVEKQEEYEGLLNVLE 64

Query: 68  DNLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           +   ++    +E+   + +   D  L +I    E  +F  +     D  +  +E+ AG G
Sbjct: 65  EANAIIADGSDEEMVELAKLEKDEALHKIPKLEEEIKFMLIPKDPEDDKNVIVELRAGTG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   + RMY  + +++ ++ E L   +    G K   + ++G   YG +K E G
Sbjct: 125 GDEAAIFVEDIYRMYAMYFKQKGWQHEVLNTSEASGKGFKEMVISVEGNAVYGTMKYESG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P   + +++EI+ +D    T R+SGAGGQ+VN  
Sbjct: 185 VHRVQRVPETESQGRVHTSAITVAVLPEA-EEVDVEINPADLEYQTARSSGAGGQNVNKV 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++ V++TH P+G+V+ CQ+ RSQHKN+ +A  +LR KLYE+E +K+    +    S    
Sbjct: 244 ETKVQLTHKPSGIVIVCQEARSQHKNREKALQLLRTKLYEIEFEKKHAERSEQRKSLVST 303

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R N    +  + ++GD+ + + A 
Sbjct: 304 GDRSAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMIDAL 347


>gi|261838950|gb|ACX98715.1| peptide chain release factor RF-1 [Helicobacter pylori 52]
          Length = 352

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISITSKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|108562503|ref|YP_626819.1| peptide chain release factor 1 [Helicobacter pylori HPAG1]
 gi|119361549|sp|Q1CV77|RF1_HELPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|107836276|gb|ABF84145.1| peptide chain release factor RF-1 [Helicobacter pylori HPAG1]
          Length = 352

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGNEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K++ E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|188580162|ref|YP_001923607.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
 gi|226739114|sp|B1Z914|RF1_METPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179343660|gb|ACB79072.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
          Length = 361

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R  F+  +  D     +      L RE   LD  ++ I+  +    +   +  L
Sbjct: 9   LDAILARHEFVTAQLADGS--ADAESIVQLSRELSELDGVVAAIRHYRAAEANLAGIRAL 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +    ++     +  +       Q   L    AD   A LE+ AG GG E+
Sbjct: 67  IDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLMLLPKDAADEKSAILEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE + ++ E +   +G   G +     +KG + +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I I+E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLPEA-EEVDIAINEADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITH+PTGVVV  Q+ERSQHKN+A+A  +LR+KL++ E   ++   A   ++        
Sbjct: 246 RITHMPTGVVVFVQEERSQHKNRARAMALLRSKLFDAERTAKDSARAADRKAQVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ G  LD+ + A + 
Sbjct: 306 ERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVT 348


>gi|300858256|ref|YP_003783239.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685710|gb|ADK28632.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205977|gb|ADL10319.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           C231]
 gi|302330530|gb|ADL20724.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           1002]
 gi|308276212|gb|ADO26111.1| Peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis I19]
          Length = 356

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP    + +  + L +    L   I+   ++     D  +  E+
Sbjct: 7   VDDIVSEYQGIEAQMADPETMGDQMLFRKLSKRYSELQPIINVNNKLVQARDDYEVAKEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ +    QE +  L+   + +E +  + L      D +D  +EV AGAGG E+  +A
Sbjct: 67  AHEDHE---FQEEAARLETEVVVLEEQLADLLAPRDPHDGDDIVMEVKAGAGGEEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L+RMY R+A+K  F  E L+  + +  G+K  TL I+        A+   K E GVHR
Sbjct: 124 GELVRMYQRYADKHGFAIEVLDSSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  D+  EIEI + D RID YR+SG GGQ VNTTDSA
Sbjct: 184 VQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKDLRIDVYRSSGKGGQGVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  +  ++ E  A  G +++   +  
Sbjct: 244 VRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQSMAEEQAEAEAAEGRAAQIRTMDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL+G+LDD   A  A ++
Sbjct: 304 SERIRTYNW-PENRISDHRIGFKANNLDSVLNGELDDLFTALRAAER 349


>gi|229496829|ref|ZP_04390538.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316240|gb|EEN82164.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
          Length = 318

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 130/315 (41%), Positives = 196/315 (62%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+ + +   I   + ++  + +  +  +   E       +E     Q     +E  +  
Sbjct: 1   MRKVKEIRRWIEAYESVESAVEEVKLSFDFYKEGVAEE--EEVDQAYQIALSLIENVELR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L+V+AGAGGTESQDWA+ML+R+Y RWAE   +K       DG+EAGI
Sbjct: 59  NMLRREEDRLGAVLKVNAGAGGTESQDWASMLVRLYQRWAENHDYKVTITNWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIEI ++ 
Sbjct: 119 KTVTMQIEGDLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEIAVNP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           ++   DT+R+SGAGGQ+VN  ++ VR+ +      TG    +V++  + RSQ  N+  A 
Sbjct: 179 ANLSWDTFRSSGAGGQNVNKVETGVRLHYQFKDPDTGEEREIVIENTESRSQLDNRENAL 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +LR++LY++EL+KR       E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLRSQLYDIELEKRRAAQAEVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGD+DDF+KA L 
Sbjct: 298 VMDGDIDDFIKAYLM 312


>gi|15900891|ref|NP_345495.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
 gi|111658249|ref|ZP_01408941.1| hypothetical protein SpneT_02000563 [Streptococcus pneumoniae
           TIGR4]
 gi|20139341|sp|Q97R20|RF1_STRPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14972493|gb|AAK75135.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
          Length = 359

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 160/343 (46%), Gaps = 8/343 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R   L     DP +  +      L +E     + +   +E +  L + +   E+  E
Sbjct: 10  VEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEMIKE 69

Query: 79  ED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +     L+  K E E  +       L     D  +  LE+   AGG E+  +
Sbjct: 70  SGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALF 129

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+ R+
Sbjct: 130 AGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AVRI 
Sbjct: 190 PVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRIV 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312
           H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+        +I
Sbjct: 249 HLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRSERI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 309 RTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|225861003|ref|YP_002742512.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230460|ref|ZP_06964141.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255330|ref|ZP_06978916.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502960|ref|YP_003724900.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254790904|sp|C1CRE0|RF1_STRZT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225726985|gb|ACO22836.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238555|gb|ADI69686.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389396|gb|EGE87741.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04375]
 gi|332201491|gb|EGJ15561.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47368]
          Length = 359

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V   V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMLEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|88855314|ref|ZP_01129978.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
 gi|88815221|gb|EAR25079.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
          Length = 359

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 173/339 (51%), Gaps = 14/339 (4%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  +  DP L  + + +K + R    L   ++     +    D     E+A  ++D S 
Sbjct: 14  ELEGQLADPELHSDPVRSKKVNRRYAELSRIVAAYNNWRQLTDDLAAATEMA--DEDESF 71

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             E     + +    E  +   +     DS D  +E+  G GG ES  +A  LLRMY  +
Sbjct: 72  AAEIPGLTETLDTAQEKLRRILIPRDPNDSRDVIMEIKMGEGGAESALFAGDLLRMYLHY 131

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHRLVRISPYDS 198
           AE +K+KTE +E    +  GIK   L +KG         +  LK E GVHR+ R+   +S
Sbjct: 132 AESKKWKTEIIEQTSSDLGGIKDVQLAVKGNSSDPAEGVWAHLKYEGGVHRVQRVPATES 191

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS + + V+P VD+  E+EIS++D +ID YR+SG GGQ VNTTDSAVRITH+PTG
Sbjct: 192 QGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTG 251

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSY 315
           +VV  Q E+SQ +N+     +LRA++  L   + E  A   E  K++I       +IR+Y
Sbjct: 252 IVVAMQNEKSQLQNREAGMRVLRARI--LARYQEEADAEASEYRKSQIRTMDRSERIRTY 309

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              P   + D RT  +  +    ++G L+  +++ +   
Sbjct: 310 NF-PENRIADHRTGYKAYNLDQAINGALEPVIQSCIMAD 347


>gi|317013501|gb|ADU80937.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24]
          Length = 352

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++     L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSVEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K   +LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761553|ref|ZP_04759640.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81598182|sp|Q5NMC7|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241373861|gb|EER63394.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 358

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 173/343 (50%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  +   P L  +      L RE   ++  ++   E   RL +    LE 
Sbjct: 9   LAAIIARREELQAEMARPDL--DSNRLVALSREYSEVEP-VALAAENVGRLREEGETLEA 65

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++DD  +     + L+  K              L    AD   A LE+ AG GG E+ 
Sbjct: 66  MTKDDDPELQAMAVEELEANKTALAEAERALALSLLPRDAADERSAILEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LLRMY+R+AE+  ++ E +     E  G K   + I G   +  LK E GVHR+ 
Sbjct: 126 LFGGDLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVISITGAGVFARLKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++++I E D RID +R+SG GGQ VNTTDSAVR
Sbjct: 186 RVPVTESGGRIHTSAATVAVLPEA-EEVDVDIDERDLRIDIFRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIP+G+VV  Q E+SQHKNKA+A  +LRA+LYE E ++   E A   +S         
Sbjct: 245 ITHIPSGIVVSQQDEKSQHKNKAKAMKVLRARLYERERERLHSERAGQRKSMVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
           +IR+Y   P   V D R N+      ++L G  LD+ + A +A
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLHRLPEILAGPGLDEVISALIA 346


>gi|210134282|ref|YP_002300721.1| peptide chain release factor 1 [Helicobacter pylori P12]
 gi|238058714|sp|B6JPI0|RF1_HELP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|210132250|gb|ACJ07241.1| peptide chain release factor RF-1 [Helicobacter pylori P12]
          Length = 352

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345


>gi|329113396|ref|ZP_08242177.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
 gi|326697221|gb|EGE48881.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
          Length = 352

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 19/346 (5%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   D  V R   L  +     L  N        RE   ++  ++ I  ++  + D + 
Sbjct: 3   FDERLDQIVSRALELEAQLAS-GL--NGEAFTQASREYAEIEPVVARINALR-GVEDGIR 58

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL L   D  + +     L  ++ ++   Q       L    AD+  A LEV   AGG
Sbjct: 59  QAELLLA--DPEMKELAEAELTELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGG 116

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L  MY R+A+   ++   ++  + E  G++     I G   +  LK E GV
Sbjct: 117 DEAALFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGV 176

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++E++E+D R+D +RASGAGGQHVN T+
Sbjct: 177 HRVQRVPATESQGRIHTSTVTVAVLPEA-EDVDVEVNETDLRVDVFRASGAGGQHVNKTE 235

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LYE E    +  AN     ++++G
Sbjct: 236 SAVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERER--AQAHANRAADRRSQVG 293

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R N+       V+ G+LD+F+ A 
Sbjct: 294 TGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVDAL 338


>gi|283782510|ref|YP_003373265.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
 gi|283440963|gb|ADB19405.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
          Length = 358

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/347 (27%), Positives = 163/347 (46%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L     DP L  +  +   + RE   L       +  +    +   L+E+
Sbjct: 5   LEQKLARFEELERMMTDPSLMSDSSKMGNVAREHGSLAKLAVKYRRFKQLNDEVAALVEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSND--AYLEVHAGAGGTESQ 131
           +    D    +     +  ++ E E    +   +  G  D+      +E+ AG GG E  
Sbjct: 65  SKVS-DPDEREMAEAEIPNVRAERERIWSEVLDMTVGGEDAQRSRCVMEIRAGVGGAEGA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ EK+ +K E +E    +  G K   L  +G   +  L+ E G HR+ 
Sbjct: 124 LFAQDLYQMYKRFGEKKGWKVELMEASPTDMGGFKEVILGFEGEGVFRELQYESGGHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +E+ I   + R+D + ASG GGQHVN T+SAVR
Sbjct: 184 RVPETEAKGRVHTSAATVAVLPEP-EDVEVNIKPDEYRLDKFCASGPGGQHVNKTESAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH  TG+VV  Q E+SQHKN A+A  +L+++LY+    ++ E A      K+ +G G  
Sbjct: 243 LTHYETGIVVSMQDEKSQHKNLAKALRILKSRLYDF--YRQREQAKRAAERKSLVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P     D R  +       +++GDL   +   +   +
Sbjct: 301 SERIRTYNF-PENRCTDHRIGLTLYKLDQIINGDLQPVLDGLIEHDR 346


>gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
 gi|262085195|gb|ACY21163.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
          Length = 364

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+ + +    L   ++    +     D     EL
Sbjct: 15  IDDILAEHAGLEQQLSDPALHDDPAAARRVGKRFAELAPVMATHARLVAARDDLAAAREL 74

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A ++       E    L+    E++    + L      D +D  LE+ +GAGG ES  +A
Sbjct: 75  AADDP---AFAEEIPALESTVAELDATLTDLLAPRDPHDGDDVVLEIKSGAGGEESALFA 131

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY ++ E+  +K + L + + +  G K ATL IK         +  LK E GVHR
Sbjct: 132 ADLARMYLKYCERHGWKAQVLGVTESDLGGYKEATLSIKAKEAVREGVWSRLKFEGGVHR 191

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  ++  ++ I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 192 VQRVPVTESQGRIHTSAAGVLIYPEPEELEQVAIDESDLRIDVYRSSGKGGQGVNTTDSA 251

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     ++ +  A  G +++   +  
Sbjct: 252 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEEAQAAAAQGRAAQIRTVDR 311

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL G++D  + A +A  +
Sbjct: 312 SERIRTYNF-PENRIADHRIGYKANNLDAVLGGEMDGLLDALVAADR 357


>gi|330995510|ref|ZP_08319414.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
 gi|329575422|gb|EGG56964.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
          Length = 370

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 16/357 (4%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D  +  V R   + T   DP++  +      L +E + L + +   KE  D L    
Sbjct: 6   SILDKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQ 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAG 126
              E+   EDD  + +   + +   +  +   +   + LL  +   D  +  +E+  G G
Sbjct: 66  DAKEMLAIEDDPEMKEMAREEMAAAEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYT++ E + +K       +G   G K     + G   YG LK E G
Sbjct: 126 GDEAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P   +  ++EI+E + + DT+R+SGAGGQ+VN  
Sbjct: 186 VHRVQRVPATETQGRVHTSAATVAVLPEAQE-FDVEINEGEIKWDTFRSSGAGGQNVNKV 244

Query: 247 DSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIAN 297
           +S VR  +      TG      ++C + R Q KNK +A   LR  +Y+ E QK  ++IAN
Sbjct: 245 ESGVRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIAN 304

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             ++  +      +IR+Y   P   + D R      +    +DG++ D +      +
Sbjct: 305 RRKTMVSTGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQDCIDQLTVAE 360


>gi|224283865|ref|ZP_03647187.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287872|ref|YP_003939130.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|311064752|ref|YP_003971477.1| peptide chain release factor 1 (RF-1) PrfA [Bifidobacterium bifidum
           PRL2010]
 gi|313141020|ref|ZP_07803213.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309251808|gb|ADO53556.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|310867071|gb|ADP36440.1| PrfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium bifidum PRL2010]
 gi|313133530|gb|EFR51147.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 362

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +   P +  N  + + L R    L   +S  +       D     E+A E
Sbjct: 12  ALEEYQSIEQQMASPEVVTNPDKMRKLGRRHAELGAIVSAYQSYTAVRDDLEAAREMAGE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D     E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DPEFADEAKRLEAELPAAEEKLRNALIPRDPDDARDVIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR +       +  E  G+K   + I+           +  LK E GVHR+ 
Sbjct: 130 RMYLRYAEKRGWAVTVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASLKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|256842350|ref|ZP_05547853.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
 gi|256735957|gb|EEU49288.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
          Length = 322

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 127/315 (40%), Positives = 188/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E   EE      +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYSEVHAAAEELELAYEYVKEEIITE--EEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
 gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
          Length = 360

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 118/349 (33%), Positives = 184/349 (52%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   I+   E+     D     E+
Sbjct: 10  VDDYVSEYQGIQAQMGDPDVVGDQDLFRKLSKRYAQLQPIINVNNELTQAREDLEAAQEM 69

Query: 76  ALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E  D    +E       + R++ E+           E D++D  +E+ AGAGG E+  
Sbjct: 70  AAE--DKEFAEEATRLEGEIVRLEEELADL---LAPRDEHDADDVIMEIKAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGV 187
           +A  L RMY ++AEK     + L++ + +  G+K  T+ +K        A+  LK E GV
Sbjct: 125 FAGDLARMYQKYAEKAGLSWDVLDLSESDLGGVKDMTVAVKAKNPSRDGAWSMLKFEGGV 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R  TS + + VYP  ++   ++I E D R+D YR+SG GGQ VNTTD
Sbjct: 185 HRVQRIPVTESQGRIQTSAAGVLVYPEPEEVEAVDIDEKDLRVDVYRSSGKGGQGVNTTD 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVRITH+PTG+VV CQ+ERSQ +N+A+A  +L+A+L +LE +K E  A  G +S+   +
Sbjct: 245 SAVRITHLPTGIVVTCQKERSQIQNRARAMQVLQARLDQLEREKAEAEAAEGRASQVRTM 304

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R N +  +   VLDG++DD + A    ++
Sbjct: 305 DRSERIRTYNW-PENRISDHRINYKSNNLDAVLDGNMDDIITALQTHER 352


>gi|169833220|ref|YP_001694464.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|238688292|sp|B1IBH9|RF1_STRPI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168995722|gb|ACA36334.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 359

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTRRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ M A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVMDALVLYDQ 350


>gi|38233635|ref|NP_939402.1| peptide chain release factor 1 [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564890|sp|Q6NHU0|RF1_CORDI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|38199895|emb|CAE49561.1| peptide chain release factor 1 (RF-1) [Corynebacterium diphtheriae]
          Length = 356

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP    +    + L +    L   I+   ++     D+    E+
Sbjct: 7   VDDIVSEYQGIEAQMSDPETMGDQTLFRKLSKRYSELQPIINVNNKLVQARDDHEAAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E     + I    E            D +D  +EV AGAGG E+  +A 
Sbjct: 67  AYE--DKEFAAEAERLAEEIVSLEEQLADLLAPRDPHDGDDIVMEVKAGAGGEEAALFAG 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L+RMY R+AEK  F  E L + + +  G+K  TL I+        A+   K E GVHR+
Sbjct: 125 ELVRMYQRYAEKHGFTVEVLGLSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  E+EI + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESQGRIQTSAAGVLVYPEPDEVAEVEIDDKDLRVDVYRSSGKGGQGVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  +  ++ E  A  G +++   +   
Sbjct: 245 RITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAMAEEQAEAEAAEGRAAQIRTMDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL+GDLDD   A  A ++
Sbjct: 305 ERIRTYNW-PENRISDHRIGYKANNLDSVLNGDLDDLFSALQAAER 349


>gi|123966944|ref|YP_001012025.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9515]
 gi|229470357|sp|A2BYQ7|RF1_PROM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123201310|gb|ABM72918.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9515]
          Length = 364

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 175/338 (51%), Gaps = 13/338 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82
           L  +  DP +  N  + +++ +ER  L+  +    ++ D    + D+  LL+    + D 
Sbjct: 20  LEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDDSRQLLKDNRNDKDM 79

Query: 83  SIL-QETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L  E   NL+ +K  +  K   +LL     D     LE+ AGAGG E+  WA  L RM
Sbjct: 80  ELLINEELCNLEVLKNSLIQKVTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGDLARM 139

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+ +K  +  + +   + +  G K   + IKG + Y  LK E GVHR+ R+   +S  
Sbjct: 140 YERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKFEAGVHRVQRVPATESQG 199

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P   D +E++I  SD  I T R+ GAGGQ+VN  ++A+ + H PTG+ 
Sbjct: 200 RVHTSTATVAVMPEA-DPVEVKIDPSDLEIGTARSGGAGGQNVNKVETAIDLIHKPTGIR 258

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V C QERSQ +N+ +A  +LRAKLYE++L  +E           ++G G    +IR+Y  
Sbjct: 259 VFCTQERSQLQNRERAMEILRAKLYEIQL--KEANDKERSQRLMQVGTGDRSEKIRTYNF 316

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +      D R      +   +L G LD+ + A +A ++
Sbjct: 317 KD-NRTTDHRLG-SNFALEPILAGQLDEVIDACIAQEQ 352


>gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R]
 gi|24418635|sp|Q8NR57|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223553|sp|A4QDG1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC
           13032]
 gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum
           ATCC 13032]
 gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 358

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I+  +++     D     E+
Sbjct: 8   VDDILSEYHGLEQQMADPELHNDAAAARRVGKRYSELQPIINVHRDLVSAQEDLEAAREM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E       +    E            D  D  +E+ AGAGG E+  +A 
Sbjct: 68  AHE--DHEFQAEAERLEVEVVELEEKLADLLAPRDPHDGEDIVMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            LLRMY ++A+K  F  E L+  + +  G+K  TL I+        A+   K E GVHR+
Sbjct: 126 DLLRMYQKFADKHGFVVEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+   +EI E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVENVEIDEKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +N+A+A  +L A+L  ++ ++    A  G +++   +   
Sbjct: 246 RITHLPTGLVVTCQKERSQIQNRARAMQVLAARLQAMKEEEAAAEAATGRAAQIRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDG+LDD   A  A ++
Sbjct: 306 ERIRTYNW-PENRISDHRIGFKANNLDSVLDGELDDLFTALQAAER 350


>gi|297180646|gb|ADI16856.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_13E22]
          Length = 359

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 179/346 (51%), Gaps = 10/346 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  + R   + +   D        E   L RE   L      I  ++    D    + LA
Sbjct: 8   DKVLARRDEVESWLADAASMS-PDELASLSRELSELRPVCEQIDLVRRLEGDRDAAVMLA 66

Query: 77  LEE-DDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E  DD  + +     +Q I+     E+   Q   L     DS +A LEV AG GG E+ 
Sbjct: 67  EEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 127 LFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I++ +SD RID +RASG GGQ VNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EDVDIDVQDSDLRIDVFRASGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIPTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + + E A   +          
Sbjct: 246 ITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAERAASRKGQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+ G+ LD+ ++A +A  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDR 350


>gi|126658019|ref|ZP_01729171.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
 gi|126620657|gb|EAZ91374.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
          Length = 369

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  K  Q+   +     ++
Sbjct: 10  LQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAKQI 69

Query: 76  ALEED-DCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +  +  +    ++++   E  +   L     D  +  LE+ AG GG E+
Sbjct: 70  VKEAGGDPEMREMAAMEVSELEEQLQQLEEQLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +EI+I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMPEV-DEVEIQIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L  RE+   +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKL--REQQEAVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  + +  L+G++D+ ++  ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQ 352


>gi|300789609|ref|YP_003769900.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
 gi|299799123|gb|ADJ49498.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
          Length = 356

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L T+  DP +  +   A+ L R    L   +  + ++     D     E+
Sbjct: 6   LKGLLAEHAELETQLADPAVHADQARARKLGRRYAELTPVVRAVHDLDTVRDDLAATREM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
           A E    +     ++ L     ++E +  E LL     D +D  +E+ +G GG ES  +A
Sbjct: 66  ASE---DAEFAAEAEELAARIPDLESRLTELLLPRDPYDGSDVVMEIKSGEGGEESALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             LLRMY R+AE+  +K E L+  D +  G K  TL IK         +  LK E GVHR
Sbjct: 123 GDLLRMYLRYAERHGWKAEVLDSVDSDLGGFKDVTLSIKSKAAAVDGVWSRLKFEGGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS S + +YP  +  +E+EI  +D RID +R+SG GGQ VNTTDSA
Sbjct: 183 VQRVPATESQGRIHTSASGVLIYPEPE-EVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ E+SQ +N+A+A  +L+A+L  +  ++    A+    S+   +  
Sbjct: 242 VRITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAVAEEEAAAKASDARRSQVRTVDR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++R+Y   P   + D R N +  +   VLDGDLD  + A     +
Sbjct: 302 SERVRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVLDALATADR 347


>gi|157803730|ref|YP_001492279.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
 gi|166223597|sp|A8EYR1|RF1_RICCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157784993|gb|ABV73494.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
          Length = 355

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 127/344 (36%), Positives = 184/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V +   L  K     +  +  E     +E   L+  +  IKE      +       
Sbjct: 7   LAKIVDKYENLGKKLSS-GIMGD--EFVKASKEYAELEEVVEKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   EADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDEADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + +  E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIKGKDVFSKLKCESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S+ R HTS +++ V P V + ++I++ + D RIDTYR+SGAGGQHVNTT+SAV
Sbjct: 184 QRIPETESHGRIHTSAATVAVLPEV-EDVDIKLEDKDLRIDTYRSSGAGGQHVNTTNSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+E+  AN            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQKRANNRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F+ A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIA 345


>gi|53711665|ref|YP_097657.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60679910|ref|YP_210054.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|253564278|ref|ZP_04841735.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265765049|ref|ZP_06093324.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52214530|dbj|BAD47123.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60491344|emb|CAH06092.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|251948054|gb|EES88336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254433|gb|EEZ25867.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301161435|emb|CBW20975.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 319

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 125/315 (39%), Positives = 189/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    +++    +  +  +   +E      QE  +   +    VE  + +
Sbjct: 1   MKLVKGLQKWIEGYNDVKTLTDELELAFDFYKDE--LVTEQEVDEAYAKALEHVENLELQ 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG ++ F+KA L 
Sbjct: 298 VMDGKIEGFIKAYLM 312


>gi|83859678|ref|ZP_00953198.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
 gi|83852037|gb|EAP89891.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
          Length = 357

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 171/346 (49%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L       +E++           +
Sbjct: 8   LDQVIDRFDQVEARLSA---AADPDEIVKLSKEHAELKLVAEKARELKTARESFEEAEAI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++   +  Q +K  +       Q   +     D     LE+ AG GG E+ 
Sbjct: 65  IEDGSDRDMVELAEEERQELKKRLPGLERELQLLLIPKDRDDDASIMLEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A    +K + +E  + E  G K     + G   +G +K E GVHR+ 
Sbjct: 125 LFAGDLFRMYERYASNHGWKVDVVEASEAEVGGYKEIVASVSGKGVFGKMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   +++EI+I + D RIDT RASGAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSAATVAVLPEP-ENVEIDIKDEDIRIDTMRASGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGR 310
           +THIPTG+VV    E+SQH+N+A A  +L+A+LYE E ++++E  A   +          
Sbjct: 244 MTHIPTGIVVVSS-EKSQHQNRAIAMQVLKARLYEKERREKDEARAAERKGQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +IR+Y   P   V D R N+      ++L GD LD+ + A L+  +
Sbjct: 303 RIRTYNF-PQGRVSDHRINLTLYKLDEILSGDALDEVIDALLSEDQ 347


>gi|217033144|ref|ZP_03438604.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298736978|ref|YP_003729508.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
 gi|216945129|gb|EEC23827.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298356172|emb|CBI67044.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
          Length = 352

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 172/340 (50%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345


>gi|318042535|ref|ZP_07974491.1| peptide chain release factor 1 [Synechococcus sp. CB0101]
          Length = 365

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 159/346 (45%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D A      L  +  DP +  N  + + + RER  L+  +    E+Q          EL
Sbjct: 10  LDAARTTFDTLERQLADPDVAANPAQLEPIARERARLEPLVMGYDELQTLQGQEQQAREL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +     + L  +   +   +       L     D     LE+ AGAGG E+
Sbjct: 70  LRESRGDLDLEALAQEELAELATRISALEEQLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+   +K + +   + E  G K   L IKG   +  LK E GVHR+
Sbjct: 130 ALWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIKGDGVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVQIDPGDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE EL            ++   G   
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELATANAEERSARLAQVGTGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R      S   VL G L + + A ++  +
Sbjct: 309 EKIRTYNYKD-NRTTDHRLG-RNFSLEPVLQGQLAELIGACVSADQ 352


>gi|150009345|ref|YP_001304088.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262384740|ref|ZP_06077873.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
 gi|149937769|gb|ABR44466.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262293721|gb|EEY81656.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
          Length = 322

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 127/315 (40%), Positives = 188/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E   EE      +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVKEEIITE--EEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVET 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|188526883|ref|YP_001909570.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
 gi|238691882|sp|B2URQ8|RF1_HELPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188143123|gb|ACD47540.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
          Length = 352

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVSINSSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|332876543|ref|ZP_08444305.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685510|gb|EGJ58345.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 370

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 16/357 (4%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D  +  V R   + T   DP++  +      L +E + L + +   KE  D L    
Sbjct: 6   SILDKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQ 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAG 126
              E+   EDD  + +   + +   +  +   +   + LL  +   D  +  +E+  G G
Sbjct: 66  DAKEMLATEDDPEMKEMAREEMAATEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYT++ E + +K       +G   G K     + G   YG LK E G
Sbjct: 126 GDEAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P   +  ++EI+E + + DT+R+SGAGGQ+VN  
Sbjct: 186 VHRVQRVPATETQGRVHTSAATVAVLPEAQE-FDVEINEGEIKWDTFRSSGAGGQNVNKV 244

Query: 247 DSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIAN 297
           +S VR  +      TG      ++C + R Q KNK +A   LR  +Y+ E QK  ++IAN
Sbjct: 245 ESGVRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIAN 304

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             ++  +      +IR+Y   P   + D R      +    +DG++ D +      +
Sbjct: 305 RRKTMVSTGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQDCIDQLTVAE 360


>gi|307565625|ref|ZP_07628103.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
 gi|307345657|gb|EFN91016.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
          Length = 370

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/353 (28%), Positives = 168/353 (47%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP++  +      L RE + L + +   K     L       ++
Sbjct: 11  LDGLEARFEEVSTLITDPNVINDQARYVKLTREYKDLGDIMEARKRYIACLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E+D  + +   + L   + ++ ++E  + + LL      D+ +  +EV AG GG E+
Sbjct: 71  LANENDPDMKEMAREELSDNEILQPKLEE-EIKLLLVPKDSEDAKNVQMEVRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  +  MY R+ +K+ +     +I++G   G K     I G   YG LK E GVHR+
Sbjct: 130 ALFAGDIFNMYKRFCDKKGWTLSVTDINEGAVGGFKEIDFAISGEGVYGILKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   D+  R  TS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPSTDTQGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG +    ++C + R Q KNK +A + LR  +Y+ E QK   +IAN  +S
Sbjct: 249 RLRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYINDIANRRKS 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           ++G++ + + A    +
Sbjct: 309 LVSTGDRSAKIRTYNY-PQGRVTDHRIGFTSHDLPGFMNGNIQEMIDALTVAE 360


>gi|15966364|ref|NP_386717.1| peptide chain release factor 1 [Sinorhizobium meliloti 1021]
 gi|307313049|ref|ZP_07592676.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
 gi|20139338|sp|Q92MK5|RF1_RHIME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15075635|emb|CAC47190.1| Probable peptide chain release factor 1 (RF-1) protein
           [Sinorhizobium meliloti 1021]
 gi|306899368|gb|EFN30002.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
          Length = 360

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILL 73
              +R   +  +    P           L  E   L   +S I+  +     L D   +L
Sbjct: 11  ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIAAML 66

Query: 74  -ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + A ++D   + +     ++     +E + Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+I++   D R+DT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLPEA-EEIDIDVRPEDIRVDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV    E+SQH+N+A+A  +LR++LY++E Q+ +   +    S+   G    
Sbjct: 246 ITHIPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQRADSERSADRRSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+       +++G++DD + A LA
Sbjct: 305 RIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLA 345


>gi|269128128|ref|YP_003301498.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
 gi|268313086|gb|ACY99460.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
          Length = 361

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 119/348 (34%), Positives = 177/348 (50%), Gaps = 15/348 (4%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  +   + +  K  DP +  +   A+ L +    L   +   ++++    D     
Sbjct: 1   MNLDELIGEYTEIEGKLADPAVHADQNAARRLGKRYAQLRPIVETARQLRSVEGDLEAAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132
           ELA E          +  L++ + E+E K  + L+     D  D  LE+ AG GG ES  
Sbjct: 61  ELAAE---DGAFAAEAAELEKRRTELEQKLRKLLIPRDPNDDKDVILEIKAGEGGEESAL 117

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP--------NAYGWLKGE 184
           +A  LLRMY R+AE+  +KTE L     +  G K  T+ +K           A+  LK E
Sbjct: 118 FAGDLLRMYLRYAERIGWKTEILSSQPSDLGGYKDVTVAVKARPGPDGEPIGAWSHLKFE 177

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS   + V P   + I+++I  +D RID YR+SG GGQ VN
Sbjct: 178 GGVHRVQRVPVTESQGRIHTSAVGVLVTPEA-EEIDVQIDPNDLRIDVYRSSGPGGQSVN 236

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303
           TTDSAVRITH+PTGVVV CQ E+SQ +NK QA  +LR++L  L  Q+ E  A     S+ 
Sbjct: 237 TTDSAVRITHLPTGVVVSCQNEKSQLQNKEQAMRILRSRLLALAQQEAEAAAAAERRSQV 296

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +    ++R+Y   P   + D R   +  +   VLDGDL + ++  +
Sbjct: 297 RTVDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGDLHNVIQTLV 343


>gi|222149911|ref|YP_002550868.1| peptide chain release factor 1 [Agrobacterium vitis S4]
 gi|254790856|sp|B9JT13|RF1_AGRVS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221736893|gb|ACM37856.1| peptide chain release factor 1 [Agrobacterium vitis S4]
          Length = 359

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 22/346 (6%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILL 73
              +R   +  +    P           L  E   L   +  I+E+   +  + D   L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVKAIRELGLAEKEVADLKAL- 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTE 129
            LA +  D  +       L  ++  +E  +     + L    AD   A LE+ AG GG+E
Sbjct: 66  -LADKSTDREMRDLAEMELPDVEARLEGLEKEIQIQLLPKDAADEKSAILEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A  + +K E L   +G+  G K     + G   +  LK E GVHR
Sbjct: 125 AALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIATVTGRGVFSKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + I+IE+   D RIDT R+SGAGGQHVNTTDSA
Sbjct: 185 VQRVPDTETQGRIHTSAATVAVLPEA-EEIDIEVRAEDIRIDTMRSSGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV    E+SQH+N+A+A  +LR++L+++E   +   +      K+++G G
Sbjct: 244 VRITHLPTGLVVTSS-EKSQHQNRAKAMQVLRSRLFDMER--QRADSERSADRKSQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+       ++ G++D+ + A +A
Sbjct: 301 DRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALIA 345


>gi|307636767|gb|ADN79217.1| peptide chain release factor 1 [Helicobacter pylori 908]
 gi|325995353|gb|ADZ50758.1| Peptide chain release factor 1 [Helicobacter pylori 2018]
 gi|325996950|gb|ADZ49158.1| Peptide chain release factor 1 [Helicobacter pylori 2017]
          Length = 352

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 173/340 (50%), Gaps = 5/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++     L +E+  ++      KE    L       EL
Sbjct: 8   LSSILRRYDELTALLSSAEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    + L      D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K   +LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMPEV-DDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++   A   +          +IR
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + + R N+   S  +++  G+LD+ +   +A
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345


>gi|32475815|ref|NP_868809.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|81659907|sp|Q7ULT3|RF1_RHOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32446358|emb|CAD76186.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|327538345|gb|EGF25018.1| peptide chain release factor 1 [Rhodopirellula baltica WH47]
          Length = 360

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L     DP +  +        RE   L+   +  +  +    +    + +
Sbjct: 9   LEEKLARFEKLENDMSDPEVLSDGARMSATAREHGGLNRLANQYRTFKRLTDEIHQCVAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND--AYLEVHAGAGGTESQ 131
             + +D    +     ++ ++ E E   +   SL  G  DS+     +E+ AG GG E+ 
Sbjct: 69  VADAEDVDEREMAESEMESLRKERETVWEDLLSLTVGGEDSHRTRCVMEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MYTR+AEK  +KTE ++    E  G K  TL ++G N +  L+ E G HR+ 
Sbjct: 129 LFARDLFEMYTRYAEKVGWKTELMDASPTEMGGFKDVTLTLEGDNVFRDLQYESGGHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +EI++   D R D + ASG GGQHVN TDSAVR
Sbjct: 189 RVPETETQGRVHTSAATVAVMPEP-EDVEIDLKPDDYRKDFFGASGPGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH  TG+VVQCQ E+SQHKN A+A  +L+A++YE + ++               G   +
Sbjct: 248 LTHHETGIVVQCQDEKSQHKNLAKALRVLKARIYEKKREEEAAKQAEARKGLIGSGDRSQ 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+       ++ GDL+   +A +   +
Sbjct: 308 RIRTYNF-PQNRLTDHRINLTIYKLDQIIAGDLNPVTEALIEYDR 351


>gi|20139347|sp|Q9AG29|RF1_STRAG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13487345|gb|AAK27505.1|AF343879_1 peptide chain release factor 1 [Streptococcus agalactiae]
          Length = 359

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 8/343 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R   L     DP++  +      L RE  +    ++  +E +  + +     E+  +
Sbjct: 10  VEDRYEELGELLSDPYVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEMIKD 69

Query: 79  -EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +   + L+  K   E  +       L     D  +  LE+   AGG E+  +
Sbjct: 70  ASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALF 129

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+ R+
Sbjct: 130 AGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P V + +E EI + D R D Y ASGAGGQ+VN   +AVR+ 
Sbjct: 190 PVTESQGRVHTSTATVLVMPEV-EEVEYEIDQKDLRADIYHASGAGGQNVNKVATAVRMV 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312
           HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+        +I
Sbjct: 249 HIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 309 RTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|255016197|ref|ZP_05288323.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_7]
          Length = 322

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 127/315 (40%), Positives = 188/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E   EE      +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVKEEIITE--EEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|289167970|ref|YP_003446239.1| peptide chain release factor I [Streptococcus mitis B6]
 gi|288907537|emb|CBJ22374.1| peptide chain release factor I [Streptococcus mitis B6]
          Length = 359

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +         L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSETKRFMELSKEEASSRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|15604386|ref|NP_220902.1| peptide chain release factor 1 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225942|sp|Q9ZD21|RF1_RICPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3861078|emb|CAA14978.1| PEPTIDE CHAIN RELEASE FACTOR 1 (prfA) [Rickettsia prowazekii]
 gi|292572142|gb|ADE30057.1| Peptide chain release factor RF-1 [Rickettsia prowazekii Rp22]
          Length = 355

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 126/342 (36%), Positives = 188/342 (54%), Gaps = 12/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL----L 73
             + +   L  K     +  +  E     +E   L++ +  IK+      +        L
Sbjct: 9   KILDKYENLGKKLSS-GIIGD--EFVKASKEYAELEDVVVKIKQYNKAKSELEEANNFRL 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           E+AL+     ++      L+ +  ++E   +   L   EADS  A +EV AG+GG E+  
Sbjct: 66  EMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGGEEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A +L  MY R++E + ++ E L I D    G K A+  IKG + +  LK E GVHR+ R
Sbjct: 126 FAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS +++ V P   + I+I+I + D RIDTYRASGAGGQHVNTTDSAVRI
Sbjct: 186 IPETESQGRIHTSAATVAVLPEA-EGIDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           THIPTG+ V  Q E+SQHKNKA+A  +LRA+LYE + +++E+  +     +   G    +
Sbjct: 245 THIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQERSDSRRGQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
           IR+Y   P   V D R N+      +V+  G LD+F++A +A
Sbjct: 305 IRTYNF-PQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345


>gi|149196233|ref|ZP_01873288.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
 gi|149140494|gb|EDM28892.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
          Length = 358

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   + ++  DP ++ +    + L +E Q L + +      ++   +     E+
Sbjct: 8   VERLRMRFKQVESELSDPSVFDDKDRYQDLSKEHQRLSSLVQTYDRQEEVKAELADNKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +    ++  ++ E+   + + +         DS +  +E+   AGG E+ 
Sbjct: 68  LSGESDEELKEMIKLDMAGLEEELPLLEKKLMMLIVPPDPNDSRNCIVEIRPAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L++MY  ++  + +K E +E    +  G+K+    +KG + +  L  E GVHR+ 
Sbjct: 128 LFAEDLMKMYQIYSSNKSWKVEVMEYTPSDLGGLKATVFSVKGEDVFRELNFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS  ++ V P   + +++ I   + + DTYR+SGAGGQ VNTTDSAVR
Sbjct: 188 RIPKTETQGRVHTSTVTVAVLPEA-EEVDLHIDPKELKFDTYRSSGAGGQCVNTTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+    QQERSQH+NK  A  +LR+KL + ++  R+E   + +  + +IG G  
Sbjct: 247 VTHIPTGLACYSQQERSQHQNKEIAMQLLRSKLLDEKI--RQEKQKMSDERRGQIGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D R  +   +  DV+ G   D M   LAI 
Sbjct: 305 SERIRTYNY-PQSRITDHRFGVTVHNLPDVMAGKFADVMDKILAID 349


>gi|329888688|ref|ZP_08267286.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
 gi|328847244|gb|EGF96806.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
          Length = 345

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 177/344 (51%), Gaps = 18/344 (5%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            + R   +  +        +  E   L +E   L      ++ +     +   L  +A  
Sbjct: 1   MLDRFHQVEARMGAAT---DGAEIVRLSKEHAELKPVADAVQALARARAEADDLKAMAA- 56

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSN---DAYLEVHAGAGGTESQDWA 134
             D  +    SD L  +   +   + E  LL    D++    A LEV AG GG E+  +A
Sbjct: 57  --DPEMAALASDELDALTERLPTLEREVALLLAPRDADENASAVLEVRAGTGGDEAALFA 114

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+A+ R ++ E     +G+  G K     + G   +G LK E GVHR+ R+ 
Sbjct: 115 GDLFRMYSRYAQSRGWRVEIDSAAEGDAGGFKEIIATVSGEGVFGRLKFESGVHRVQRVP 174

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS ++I V P V + +EIEI + D RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 175 TTEAGGRIHTSAATIAVLPEV-EDVEIEILDKDIRIDTYRSSGAGGQHVNKTDSAVRITH 233

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V     E+SQH N+ +A   LR +LY+++   + + A   ++ K+++G G    +
Sbjct: 234 LPTGIVATSS-EKSQHVNRDKAMKNLRVRLYDMQR--QAKDAARSDARKSQVGSGDRSER 290

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +   S   +L+GDLD  + A +A  +
Sbjct: 291 IRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQ 333


>gi|260427219|ref|ZP_05781198.1| peptide chain release factor 1 [Citreicella sp. SE45]
 gi|260421711|gb|EEX14962.1| peptide chain release factor 1 [Citreicella sp. SE45]
          Length = 349

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 178/339 (52%), Gaps = 10/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  +L  +  +     ++     L RE   L   +  I E      D     E+
Sbjct: 7   LQQIRERFEYLEARMAEGG--GDIA---ALGREYAELKPVVDQIAEWNRLQADLTEAEEM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E    L+    E E   Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 62  LADPEMKALAEEELPALRARLPEAEKALQLALLPRDAADARPAILEIRPGTGGEEAALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R++E R ++ E +E  D E  G+K   + I+G N +  LK E GVHR+ R+ 
Sbjct: 122 GDLARMYQRYSEARGWRWEVIEEQDTELGGLKELVVRIEGENVFARLKFESGVHRVQRVP 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   ++++I+I+  D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 182 ETESGGRIHTSAATVAVLPEA-EAVDIDIASGDLRIDTMRSSGAGGQHVNTTDSAVRITH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIR 313
           +PTG+VV    E+SQH+N+  A N+LRA+LY++E QK ++  A+   +         +IR
Sbjct: 241 LPTGLVVTSS-EKSQHRNREIAMNVLRARLYDMERQKADDARASDRRAQVGSGDRSERIR 299

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R  +       +L GDLD+ + A  A
Sbjct: 300 TYNF-PQGRMTDHRIGLTLYRLEAILSGDLDEIVDALTA 337


>gi|172038958|ref|YP_001805459.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
 gi|171700412|gb|ACB53393.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
          Length = 375

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  K  Q+   +     ++
Sbjct: 16  LQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAKQI 75

Query: 76  ALEED-DCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +  +  +    ++++   E  +   L     D  +  LE+ AG GG E+
Sbjct: 76  VKEAGGDPEMREMAAMEVSELEEKLEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I G   Y  LK E GVHR+
Sbjct: 136 SIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVHRV 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +EI+I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 196 QRVPVTEAGGRVHTSTATVAIMPEV-DEVEIQIDPKDIEMTTARSGGAGGQNVNKVETAV 254

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L  RE+   +    ++++G G 
Sbjct: 255 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKL--REQQEAVSSMRRSQVGTGS 312

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  + +  L+G++D+ ++  ++  +
Sbjct: 313 RSEKIRTYNYKD-NRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQ 358


>gi|257791638|ref|YP_003182244.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
 gi|257475535|gb|ACV55855.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
          Length = 352

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 175/343 (51%), Gaps = 10/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++    +  K  DP +  +  E   L +E  +        +E      D     E+  
Sbjct: 7   KIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAEAREMLA 66

Query: 78  EEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + D     L+E +    ++    E  +F  + +  AD  D  +E+ A AGG E+  +A  
Sbjct: 67  DPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGE 126

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L +MY R+A  + +KTE +++   E  G K     +KG + Y  +K E GVHR+ R+   
Sbjct: 127 LYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKT 186

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   D +E+EI+E+D RID YRA G GGQ VNTTDSAVRITH+P
Sbjct: 187 ESQGRIHTSTATVAVLPEA-DEVEVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITHLP 245

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VVQ Q ++SQ +NK  A  +LRA+LY  E    E+ A  G     +IG G    +IR
Sbjct: 246 SGLVVQSQDQKSQLQNKIAAMAVLRARLY--EKMLAEQQAAEGAKRLAQIGSGDRSEKIR 303

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +Y   P   V D R      + + VL GD L D + A  A  +
Sbjct: 304 TYNG-PQDRVTDHRIGF-NGTYNGVLLGDGLGDVITALQAADR 344


>gi|307321056|ref|ZP_07600462.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
 gi|306893331|gb|EFN24111.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
          Length = 360

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILL 73
              +R   +  +    P           L  E   L   +S I+  +     L D   +L
Sbjct: 11  ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIAAML 66

Query: 74  -ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + A ++D   + +     ++     +E + Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 127 LFAGNLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+I++   D R+DT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLPEA-EEIDIDVRPEDIRVDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV    E+SQH+N+A+A  +LR++LY++E Q+ +   +    S+   G    
Sbjct: 246 ITHIPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQRADSERSADRRSQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+       +++G++DD + A LA
Sbjct: 305 RIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLA 345


>gi|304570793|ref|YP_002516272.2| peptide chain release factor 1 [Caulobacter crescentus NA1000]
 gi|22096040|sp|Q9A9V5|RF1_CAUCR RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 356

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 179/343 (52%), Gaps = 9/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ +     +   L  +
Sbjct: 8   LDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134
           A + +   ++++    L      +E +    L   + D N  A LEV AG GG E+  +A
Sbjct: 65  ASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A+ + ++ E   I +GE  G K     I G   +G LK E GVHR+ R+ 
Sbjct: 125 GDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 185 ATEAQGRIHTSAATVAVLPEA-EDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTGVVV    E+SQH+N+A+A   L+A+LY+++ +  +   +    S+   G    +IR
Sbjct: 244 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSERIR 302

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +Y   P   V D R N+   + + +++GD LDD +   +A  +
Sbjct: 303 TYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQ 344


>gi|325107093|ref|YP_004268161.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
 gi|324967361|gb|ADY58139.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
          Length = 358

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L  +  DP +  +  +   + +E   L      +++      D      +
Sbjct: 5   LETKYQRFLELEKQMADPDVLSDPQKMLAIQKEYGGLKKVAHAVRDYHTLEADIEAAEMM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLS--GEADSNDAYLEVHAGAGGTESQ 131
             EEDD    +     L  ++   +    + E L +           +E+ AG GG E+ 
Sbjct: 65  LEEEDDPDDREYAQSELDALEKRRDKMAEELEDLATAGDSITRGGLIMEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY+R+ E R +K E ++ H  E  G+K     + G  A+  L+ E G HR+ 
Sbjct: 125 LFALNLYEMYSRYIETRGWKKEVMDFHPTEMGGVKEVVFSVSGEGAFHELQFESGGHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D +EI+I   D ++DT+RASG GGQ VN T+SA+R
Sbjct: 185 RVPETETQGRIHTSAATVAVLPEA-DEVEIDIKPEDLKVDTFRASGPGGQKVNKTESAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV CQ E+SQHKN+A A  +LR+++  LE Q++   +      +T IG G  
Sbjct: 244 ITHLPTGTVVTCQDEKSQHKNRASAMRVLRSRI--LENQQQAADSERASQRRTLIGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       ++ G+L++ +   L   +
Sbjct: 302 SSRIRTYNY-PQGRVTDHRIGLTLHKLDQIMAGNLEELVSGLLEFDR 347


>gi|319760398|ref|YP_004124336.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039112|gb|ADV33662.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 265

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 142/254 (55%), Positives = 180/254 (70%), Gaps = 2/254 (0%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIH 158
           +  +   +   E D+ + Y+++ +G+GG E+QDWANMLLRMY +W + K+ F  +     
Sbjct: 7   DKLEMYRMFFQEHDNCNCYVDIQSGSGGIEAQDWANMLLRMYLKWLDSKKGFYVKKTTET 66

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            GE  GIKSAT+ I GP AYGWLK E GVHRLVR SP+DS  RRHTSF+SI+VYP +DD+
Sbjct: 67  SGEFLGIKSATIKIIGPYAYGWLKTESGVHRLVRKSPFDSGGRRHTSFASIFVYPELDDN 126

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           I I I   D R+D YRASGAGGQHVN T+SAVR+THIPT VV QCQ +RSQHKNK QA  
Sbjct: 127 ITINIRPEDLRVDVYRASGAGGQHVNRTESAVRVTHIPTNVVTQCQSDRSQHKNKNQAIK 186

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
            L+AKLY LELQK++    I E+ K +I WG QIRSY+L     +KDLRT +EK +   V
Sbjct: 187 QLKAKLYNLELQKKQYEKKIRENKKLDITWGSQIRSYILDDS-RIKDLRTGLEKRNVKAV 245

Query: 339 LDGDLDDFMKATLA 352
           L+GDLDDF+  ++ 
Sbjct: 246 LNGDLDDFVTMSIK 259


>gi|218440653|ref|YP_002378982.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
 gi|226739098|sp|B7KI17|RF1_CYAP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218173381|gb|ACK72114.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
          Length = 370

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 177/344 (51%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  +  Q    +     ++
Sbjct: 10  LKSVEQTYKELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEEITGARQI 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +  +  ++ ++ ++E      +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKEAGGDSEMREMAALEVEELEEQLEQLENKLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE + +  + +     +  G K A L IKG   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEIKGDQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMPEV-DEVEVQIDPKDIEVSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L  RE+   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKL--REQQEAVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y  +    V D R   +  S    L+GD++  +++ +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLVGALEGDIEVIIQSCI 348


>gi|320449105|ref|YP_004203663.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
 gi|320151737|gb|ADW23114.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
          Length = 354

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 173/329 (52%), Gaps = 8/329 (2%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
            DP + ++    + L R    +   I+ I+E +  L D   +  L  + +   + +   +
Sbjct: 20  ADPEVLKDQKRYQALSRRYAEMGEVIALIREYRKVLEDLEGVEGLLEDPELKEVARAEKE 79

Query: 91  NLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            L   K ++E   +   L     D  DA +E+ AG GG E+  +A  LL MY R+AE+  
Sbjct: 80  ALLSRKADLEKALERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ H  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEILDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++S + +++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEES-DFQLNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G    +IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R          +L G L   ++A     +
Sbjct: 316 RIGFTTHDLEGILSGHLQPLLEALKRADQ 344


>gi|108804488|ref|YP_644425.1| peptide chain release factor 1 [Rubrobacter xylanophilus DSM 9941]
 gi|119361598|sp|Q1AVG5|RF1_RUBXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108765731|gb|ABG04613.1| bacterial peptide chain release factor 1 (bRF-1) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 364

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 170/343 (49%), Gaps = 11/343 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           V R   L  +  DP ++ +      + RE   +       +   + L +     EL    
Sbjct: 13  VARYRELTEELSDPAIFNDQRRYAEVAREHSRMRRGAELSERFLEALREEREARELIPAA 72

Query: 80  DDCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +     +    E  +  +R     E  + E +     D  D  LE+ AG GG E+  +A 
Sbjct: 73  ESAEEREFFAGEAREAGRRAGELAEEIRSELIDRDPNDDKDVILEIRAGTGGDEAALFAG 132

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L  MY R+A++  F+   L+    E  G K   + I+G  AY   K E G HR+ R+  
Sbjct: 133 DLYEMYARYADRLGFRHRVLDASPAEVGGYKEIIVEIEGDGAYSVFKHEGGTHRVQRVPK 192

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   + +E+EI+ +D  ID YR+SG GGQ VNTTDSAVRITH 
Sbjct: 193 TESQGRIHTSTATVAVLPEA-EEVEVEINPNDLEIDVYRSSGPGGQSVNTTDSAVRITHK 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QI 312
           PTG+VV CQ E+SQ +NK QA  +LR++L  LE + RE     G+    + G G    +I
Sbjct: 252 PTGLVVTCQNEKSQLQNKEQALRILRSRL--LEREMRERQEREGQMRLAQFGSGDRSAKI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   + D R  +   +   VL G+L++F KA  A ++
Sbjct: 310 RTYNF-PQGRITDHRVGLTVHNLEAVLGGELEEFTKALAAKER 351


>gi|126736399|ref|ZP_01752141.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
 gi|126714220|gb|EBA11089.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
          Length = 351

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 176/345 (51%), Gaps = 20/345 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            +  + R  FL  K  D      +     L +E   L   +      K++  ++ +   +
Sbjct: 7   IEQLIDRFQFLEAKMADGSAGNEIA---ALGKEYADLRPVVETVTAYKDLVQQIDEAEAM 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L       D  + +     L  +K  +       Q   L    AD+  A LE+  G GG 
Sbjct: 64  L------ADPEMKELAEAELPDLKAALAASEHDVQLALLPKDAADARPALLEIRPGTGGD 117

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY R+AE + ++ E LE    E  G+K     I G   +  +K E GVH
Sbjct: 118 EAGLFAADLLRMYQRYAEGQGWRFEILEESLSELGGVKEVVARIVGDGVFAKMKYESGVH 177

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++IEI+ +D RIDT RASG+GGQHVNTTDS
Sbjct: 178 RVQRVPETESGGRIHTSAATVAVLPEA-EDVDIEINANDLRIDTMRASGSGGQHVNTTDS 236

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRI HIPTG++V    E+SQH+N+  A  +L+ +L++LE QK ++  +    ++   G 
Sbjct: 237 AVRILHIPTGMIVVSS-EKSQHRNREIAMQVLKTRLFDLERQKVDDERSADRKAQVGSGD 295

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   + D R N+   S + V+ GDL++ + A  A
Sbjct: 296 RSERIRTYNF-PQGRMTDHRINLTLYSLNQVMQGDLEEIVNALQA 339


>gi|72382938|ref|YP_292293.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL2A]
 gi|119361577|sp|Q46IT8|RF1_PROMT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72002788|gb|AAZ58590.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. NATL2A]
          Length = 365

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 173/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +  + + + RER  L+  ++   ++Q    + L    L
Sbjct: 10  LETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAKGL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  DD  +     + LQ ++L     ++      L     D     LE+ AGAGG E+
Sbjct: 70  VKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G +   + +KG + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPSTESQGRVHTSTATVAVMPEA-DPVEVKIESTDLEISTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKL ELEL   E  A    +  +++G G 
Sbjct: 249 DLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEL--AEANAKERSARLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  +       VL G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGV-NFPLEQVLSGQLEDVIGACIAEEQ 352


>gi|319788960|ref|YP_004090275.1| peptide chain release factor 1 [Ruminococcus albus 7]
 gi|315450827|gb|ADU24389.1| peptide chain release factor 1 [Ruminococcus albus 7]
          Length = 359

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 182/347 (52%), Gaps = 13/347 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA- 76
               + + +N +   P +  +      LM E ++L+  +  ++E      +    +E++ 
Sbjct: 7   ALEDKFNEINERLMQPEVVNDSKLYTELMIEYKNLEPVVEALREYDKAKAEFDEAVEMSS 66

Query: 77  ---LEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              L+ D   ++QE     +       E  +   L     D  +  +E+  GAGG E+  
Sbjct: 67  DSSLDADMKDMVQEQYAESKAAMARLEEELKILLLPKDPNDDRNVIIEIRGGAGGEEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +AN L RMY+ +A ++ ++ E +  ++ E  G K  T  + G  AY  LK E GVHR+ R
Sbjct: 127 FANSLYRMYSMYAAQKNWQIEVMSANETELGGYKEITFTVSGQGAYSRLKYESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-SDCRIDTYRASGAGGQHVNTTDSAVR 251
           +   +S  R HTS  ++ V P V D +E+EI+E  + +++ +R+SGAGGQH+N T SAVR
Sbjct: 187 VPETESQGRVHTSTVTVAVLPEV-DDVELEINEEKEIKMEVFRSSGAGGQHINKTSSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + HIPTG VV+CQ ERSQ +N+ +A  ML+AKL  L+ + R +   I  + ++++G G  
Sbjct: 246 LIHIPTGTVVECQNERSQFQNREKALKMLKAKL--LDEKVRAQEDEIASNRRSQVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +       +L+G+LD+ + A     +
Sbjct: 304 SEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQ 349


>gi|225350887|ref|ZP_03741910.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158343|gb|EEG71585.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 362

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +  +P +  +  + + L R    L   +S     +    D     E+A E
Sbjct: 12  ALEEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DPDFAEEAKRLESELPAVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR +       +  E  G+K   L I+           +  LK E GVHR+ 
Sbjct: 130 RMYMRYAEKRGWTVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +     + D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++    
Sbjct: 250 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|71894205|ref|YP_278313.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
 gi|119361563|sp|Q4A6L9|RF1_MYCS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71850993|gb|AAZ43602.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
          Length = 359

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 109/336 (32%), Positives = 171/336 (50%), Gaps = 6/336 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N  ++   L ++   P +  ++ +   L +E   +   +    E  +   +     EL
Sbjct: 9   LLNIKEKYQDLKSQLNLPEIIADIKKYTKLSKEINSISEIVETFDEFLNLEENIKSSKEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    + + + + +     E  +   L   + D+ D  +E+   AGG E+ 
Sbjct: 69  LDIETDAEVIMLAKEEISQAQSKQLELEEKLKVLLLPKDKNDNKDVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT+W ++   K   L++      G    T  I+G  AY  LK E GVHR+ 
Sbjct: 129 IFAGDLYRMYTKWCQQNNMKLSTLDLSPAVSGGFTLVTFSIQGEKAYSKLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P +DD IEIEI + D RID +R+SG GGQ VNTTDSAVR
Sbjct: 189 RIPVTETKGRVHTSTATVTVMPEIDDDIEIEIKKEDLRIDVFRSSGNGGQSVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH PTG+VV CQ+ +SQ +NK  A  +L++KLY+LELQK++   +             +
Sbjct: 249 ITHFPTGIVVSCQEGKSQIQNKDIAMRILKSKLYDLELQKKQSEESGYRKLAGSGARSEK 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           IR+Y   P   V D R     +  + V++G L+  +
Sbjct: 309 IRTYNY-PQDRVTDHRIGYSTS-LNYVMEGRLNPII 342


>gi|119361587|sp|Q2K3T1|RF1_RHIEC RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 359

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLETLL 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  ++  +E  + E     L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G  
Sbjct: 246 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|218296205|ref|ZP_03496961.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
 gi|218243277|gb|EED09807.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
          Length = 354

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 172/329 (52%), Gaps = 8/329 (2%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
            DP + ++    + L R    +   I+ I+E +  L D   +  L  + +   + +   +
Sbjct: 20  ADPEVLKDQKRYQALSRRYAEMGEIIALIREYRKVLEDLEGVESLLEDPELREVAKAEKE 79

Query: 91  NLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            L   K  +E   +   L     D  DA +E+ AG GG E+  +A  LL MY R+AE+  
Sbjct: 80  ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ +  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEILDSNPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++S + +++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEES-DFQLNMDEVRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G    +IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRQARLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R          VL G L   ++A     +
Sbjct: 316 RIGFTTHDLEGVLSGKLQPLLEALKRADQ 344


>gi|332188246|ref|ZP_08389974.1| peptide chain release factor 1 [Sphingomonas sp. S17]
 gi|332011745|gb|EGI53822.1| peptide chain release factor 1 [Sphingomonas sp. S17]
          Length = 357

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 174/344 (50%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L        L  +      + +E   L+   +   E++    +   L   
Sbjct: 9   IAQIEARRDELQAMMATGDLPSD--RFVAVSKEYAELEPVANAAAEVRRLRQEADSLT-F 65

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D  + +  ++ L      +     +     L    AD   A LE+ AG GG E+ 
Sbjct: 66  MTQDGDDELRELAAEELHANRTALAAADRHLALALLPRDAADERAAMLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ ++ E +     +  G K     + G   +  LK E GVHR+ 
Sbjct: 126 LFAGDLFRMYQRYAERQGWRVEVISASIPDTGGYKEVVASVAGAGVFAKLKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++++I + D RID YR+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPVTESGGRIHTSAATVAVLPEA-EEVDLQIDDKDLRIDIYRSSGAGGQHVNTTDSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q ERSQHKN+A+A  +LR +LYE E ++    A    + ++ +G G  
Sbjct: 245 ITHIPTGLVVIQQDERSQHKNRAKAMKVLRTRLYEAERERL--AAERAGTRRSMVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+      ++L+G+LD+ + A LA
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLHRLPEILEGELDELIGALLA 345


>gi|319899228|ref|YP_004159321.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
 gi|319403192|emb|CBI76751.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
          Length = 357

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 177/342 (51%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++  + P    N      L  E   L   I  I+ +     +   L  + 
Sbjct: 11  QLEKRFETIESQMAENP----NAETYVKLASEYAELQPIIVLIRALNSLCKEIAELETII 66

Query: 77  LE-EDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + + D  +     + L    Q+++   +  Q   L    AD     +E+ AG GG+E+ 
Sbjct: 67  SDTQTDTEMRNLAQEELSSLYQKVQQLEQELQILLLPKDIADEKSVIIEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGNLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E   +    ++   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDL++ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALIS 345


>gi|255534225|ref|YP_003094596.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
 gi|255340421|gb|ACU06534.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
          Length = 361

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 91/344 (26%), Positives = 167/344 (48%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +  +   L +E   L   +S   +    +       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDIISDQKKYSALNKEYSDLGKIVSVFDQYTQAINSIAESDEI 68

Query: 76  ALEEDDCSILQETS----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D   ++       + L++I    E  +   +    AD  +  +E+ AG GG E+ 
Sbjct: 69  IADGSDKEFVEMAKMEKNEALEKIPQIEEELKVLLIPKDPADDKNVIVELRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + R Y  + + + +K E  + ++  + G K   L ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDVYRAYAMFFKTKGWKHEITDANEASK-GYKELILKVEGEGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + ++ E++ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLPEA-EEVDFELNPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +TH P+G+VV CQQ RSQ  N+  A  MLR KLY++ELQ+ + +IA   ++  +      
Sbjct: 247 LTHKPSGMVVVCQQARSQLANRELAMEMLRTKLYDIELQRVQGDIAAQRKTMVSTGDRSA 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I++Y   P   V D R N    +    ++GD+ + + A +  +
Sbjct: 307 KIKTYNY-PQGRVTDHRVNKSVYNLDAYMNGDIQEMIDAVIMAE 349


>gi|319441088|ref|ZP_07990244.1| peptide chain release factor 1 [Corynebacterium variabile DSM
           44702]
          Length = 361

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 172/341 (50%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I     +     D+    E+
Sbjct: 11  VDDILSEYQGLEMQLSDPVLHNDAAAARRVAKRFSELQPVIQTYNRLTQAREDHEAAAEM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D     E       I    E            DS+D  +EV +GAGG E+  +A 
Sbjct: 71  ASE--DAEFAAEADRLAAEIPALEEKLTDLLAPRDPHDSDDVVMEVKSGAGGEEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L+RMY R+AEK  F  E L+ ++ +  G+K  T+ I+        A+   K E GVHR+
Sbjct: 129 ELVRMYQRYAEKHGFTCEVLDTNETDLGGVKDLTMSIRSKQPTRDGAWSVFKFEGGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  D+  +++I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 189 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDDKDLRVDVYRSSGKGGQGVNTTDSAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIGWG 309
           RITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L +++ ++ +  A  G  +    +   
Sbjct: 249 RITHLPTGIVVTCQKERSQIQNKARAMQVLAARLQQMKEEEADAAAAEGRHAQIRTMDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R   +  +   VLDGDL+    A 
Sbjct: 309 ERIRTYNF-PESRVSDHRIGYKANNLDAVLDGDLEALFGAL 348


>gi|86359340|ref|YP_471232.1| peptide chain release factor 1 [Rhizobium etli CFN 42]
 gi|86283442|gb|ABC92505.1| peptide chain release factor 1 protein [Rhizobium etli CFN 42]
          Length = 351

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 3   ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLETLL 58

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  ++  +E  + E     L    AD   A LE+ AG GG+E+ 
Sbjct: 59  EDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 119 LFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 179 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G  
Sbjct: 238 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDR 294

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 295 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 337


>gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
 gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia]
 gi|81599140|sp|Q5PAH2|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790858|sp|B9KIV2|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
          Length = 359

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  +  DP     V    +  RE   L   +S I+E Q    +   L  L
Sbjct: 7   LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLIEEYQTAQKEIEELEGL 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D D  ++    + L   +  +       Q   L   + DS  A LE+ AG GG E+
Sbjct: 66  INSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+L I G + +  LK E GVHR+
Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P V + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLPEV-EEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK  +EI+ + +S        
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDEISKMRKSQIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
            +IR+Y       + D R N+       ++ +GDLD+F+ A +A  +
Sbjct: 305 ERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350


>gi|296454711|ref|YP_003661854.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184142|gb|ADH01024.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 362

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +   P +  N  + + L R    L   +   K       D     E+A E
Sbjct: 12  ALEEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DADFAEEAKRLEAELPDAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AEKR +       +  E  G+K   + I+           +  +K E GVHR+ 
Sbjct: 130 RMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|226226590|ref|YP_002760696.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
 gi|226089781|dbj|BAH38226.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
          Length = 356

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 114/338 (33%), Positives = 175/338 (51%), Gaps = 8/338 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
            A+QR   +     DP   ++      L RE   L   ++    +Q    +     ELA 
Sbjct: 11  EALQRAIEVEQLLADPETTKDAPRLAELGREHHRLAQVVARATRLQKAEQELNEARELA- 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDW 133
             DD     E    + R++ E    + E L         D   A +E+ AG GG E+  +
Sbjct: 70  NGDDPDFAAEARTEMVRLEEETAVLEKELLPLLIPRDPLDERPAIVEIRAGTGGDEAGLF 129

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMYTR+ E+R ++ E +   +G   G+K +   + G   +G L+ E GVHR+ R+
Sbjct: 130 AGDLLRMYTRFLERRGWRIEPISYSEGTLGGVKESVFKVSGDGVFGVLRWESGVHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + +++ I + D RID +R+SG GGQ VNTTDSAVRIT
Sbjct: 190 PATESQGRIHTSAATVAVLPEA-EELDMRIEDKDLRIDVFRSSGPGGQSVNTTDSAVRIT 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           HIPTG+VV  Q ++SQ +NKA+A ++LRA+L +L L ++E   +    S+   G    +I
Sbjct: 249 HIPTGIVVSQQDQKSQLQNKAKAMDVLRARLLDLRLSEQEAERSRMRKSQVSTGDRSAKI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +       V++G++  F+ A 
Sbjct: 309 RTYNF-PQGRVTDHRVGLTLYDIDSVMNGEISSFLDAL 345


>gi|284929590|ref|YP_003422112.1| peptide chain release factor 1 [cyanobacterium UCYN-A]
 gi|284810034|gb|ADB95731.1| bacterial peptide chain release factor 1 (bRF-1) [cyanobacterium
           UCYN-A]
          Length = 367

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP +  N  E + + + R  L+  ++  ++ +    + L   ++
Sbjct: 10  LHSVEQTFNELTRRLADPSIATNPNELQKVAKTRSSLEETVNAYEQWKKTEKELLETKQI 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +  S   + +++++   +       L     D  +  LE+ AG GG E+
Sbjct: 70  VKDAGGDHEMREMASIEAKELEIKLNNLEELMKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY+R+AE + +  +       +  GIK   L I G   +  LK E GVHR+
Sbjct: 130 SIWAGDLARMYSRYAESQNWVVKLANESLADMGGIKETILEITGDKVFSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMPEV-DEVEVKIDAKDIDMSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L  RE+   I    K+++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKL--REQQEEISSMRKSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  + S +L+GD+D  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFALSGILEGDIDILIESCISQDQ 352


>gi|212716435|ref|ZP_03324563.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660688|gb|EEB21263.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
          Length = 383

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +  +P +  +  + + L R    L   +S     +    D     E+A E
Sbjct: 33  ALEEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASE 92

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 93  --DPDFAEEAKRLESELPAAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 150

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR +       +  E  G+K   L I+           +  LK E GVHR+ 
Sbjct: 151 RMYMRYAEKRGWSVAVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQ 210

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +     + D +ID + +SG GGQ VNTT SAV
Sbjct: 211 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTYSAV 270

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++    
Sbjct: 271 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLD 328

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 329 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 371


>gi|126739408|ref|ZP_01755101.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
 gi|126719508|gb|EBA16217.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
          Length = 351

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 176/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     +  E   L RE   +      I   +  L D      +
Sbjct: 7   LEQILQRFQYLEAAMAEG---ASGAEIADLAREYSEIKPVAEQICAYRQLLADLEEAEVM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+    + E+  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LADPDMKELAEEEIPTLKAALPDAEHALQLALLPKDAADTRPAMLEIRPGTGGDEASLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  GIK   + IKG N +  +K E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVVHIKGENVFARMKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLPEA-EDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +   +   +S+   G    +IR
Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSERSADRASQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       ++ GDLD+ + A  A
Sbjct: 302 TYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTA 339


>gi|291457338|ref|ZP_06596728.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
 gi|291381173|gb|EFE88691.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
          Length = 362

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +   P +  N  + + L R    L   +   K       D     E+A E
Sbjct: 12  ALEEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQLKDDLEAAQEMAGE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DADFAEEAKRLESELPGAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AEKR +       +  E  G+K   + I+           +  +K E GVHR+ 
Sbjct: 130 RMYTRYAEKRGWSVNIQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHLPTGITVNMQDEKSQIQNRASALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|261880577|ref|ZP_06007004.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
 gi|270332696|gb|EFA43482.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
          Length = 369

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   + T   DP +  +      L +E + L + +   K   D L       ++
Sbjct: 10  LDGLESRFEEVKTLITDPSVIADQKRYVKLTKEYKDLSDIMDARKRYIDCLNAIKESKDI 69

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   + ++ ++E + +   +     D+ +  +E+ AGAGG E+ 
Sbjct: 70  MTNESDADMKEMAREELSINESLQPQLEEEIKMALVPKDPEDAKNVQMEIRAGAGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ + + +      + +G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 LFAGDLFNMYKKFCDTKGWSVSVTSVSEGSVGGYKEIDFAVSGDNVYGVLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG V    ++C + R Q KNK +A + L   +Y+ E  K   +I++  +S 
Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHERSKYLNDISSRRKSL 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +      +IR+Y   P   + D R           L GD+ D + 
Sbjct: 309 VSTGDRSAKIRTYNF-PQGRITDHRIGYTTHDLQGFLGGDIQDMID 353


>gi|114766145|ref|ZP_01445149.1| peptide chain release factor 1 [Pelagibaca bermudensis HTCC2601]
 gi|114541605|gb|EAU44647.1| peptide chain release factor 1 [Roseovarius sp. HTCC2601]
          Length = 349

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 20/344 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  +L  +  +     ++     L RE   L   +  I +      D      +
Sbjct: 7   LQQIRERFEYLEARMAEGS--GDIA---ALGREYAELRPVVDQIHDWTSLQADLAEAEAM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L  ++  +    +  Q   L    AD+  A LE+  G GG E+ 
Sbjct: 62  L---DDPEMKELAEEELPGLRARLPEAEKALQLALLPKDAADARPAMLEIRPGTGGEEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE R ++ E +E    E  G++   + I+G N +  LK E GVHR+ 
Sbjct: 119 LFAGDLARMYQRYAEARGWRWEVIEEQPTELGGLRELVVRIEGDNVFARLKYESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   ++++I+I+ +D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 179 RVPETESGGRIHTSAATVAVLPEA-EAVDIDIAAADIRIDTMRASGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV    E+SQH+N+  A N+LR +L++LE   ++         K ++G G  
Sbjct: 238 ITHIPTGIVVTSS-EKSQHRNREIAMNVLRTRLFDLER--QKAADARASDRKAQVGSGDR 294

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R  +       +L GDLD+ + A  A
Sbjct: 295 SERIRTYNF-PQGRMTDHRIGLTLYRLEQILAGDLDEIIDALTA 337


>gi|124026680|ref|YP_001015795.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL1A]
 gi|229470356|sp|A2C4X1|RF1_PROM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123961748|gb|ABM76531.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           NATL1A]
          Length = 365

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 173/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +  + + + RER  L+  ++   ++Q    + L    L
Sbjct: 10  LETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAKGL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  DD  +     + LQ ++L     ++      L     D     LE+ AGAGG E+
Sbjct: 70  VKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G +   + +KG + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPSTESQGRVHTSTATVAVMPEA-DPVEVKIESTDLEISTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKL ELE+   E  A    +  +++G G 
Sbjct: 249 DLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEI--AEANAKERSARLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  +       VL G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGV-NFPLEQVLSGQLEDVIGACIAEEQ 352


>gi|29348961|ref|NP_812464.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340868|gb|AAO78658.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 319

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 125/315 (39%), Positives = 188/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +   EE       +      +    VE  + +
Sbjct: 1   MKLVKDLQKWIDGYNEVKTLADELELSFDFYKEE--LVTEGDVDAAYAKASEAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMACVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +++F+KA L 
Sbjct: 298 VMDGKIEEFIKAYLM 312


>gi|23335569|ref|ZP_00120804.1| COG0216: Protein chain release factor A [Bifidobacterium longum
           DJO10A]
 gi|189440751|ref|YP_001955832.1| peptide chain release factor 1 [Bifidobacterium longum DJO10A]
 gi|238692046|sp|B3DR51|RF1_BIFLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189429186|gb|ACD99334.1| Protein chain release factor A [Bifidobacterium longum DJO10A]
          Length = 362

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +   P +  N  + + L R    L   +   K       D     E+A E
Sbjct: 12  ALEEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVDAYKAWLQVKDDLAAAQEMAGE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DADFAEEAKRLEDELPGVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AEKR +       +  E  G+K   + I+           +  +K E GVHR+ 
Sbjct: 130 RMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|319404588|emb|CBI78194.1| peptide chain release factor 1 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 359

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++  + P    N      L  E   L   I+ I+ +     +   L  + 
Sbjct: 11  QLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIAPIRTLNSLHKEIAELETII 66

Query: 77  LE-EDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + + D  +     + L    Q+I+   +  Q   L    AD     +E+ AG GG+E+ 
Sbjct: 67  SDTQTDTEMRNLAQEELSSLSQKIQELEQELQILLLPKDIADEKSVIIEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E   +    ++   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDL++ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALIS 345


>gi|317487895|ref|ZP_07946487.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325830623|ref|ZP_08164044.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
 gi|316913021|gb|EFV34538.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325487369|gb|EGC89811.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
          Length = 357

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 175/343 (51%), Gaps = 10/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++    +  K  DP +  +  E   L +E  +        +E      D     E+  
Sbjct: 12  KIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAEAREMLA 71

Query: 78  EEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + D     L+E +    ++    E  +F  + +  AD  D  +E+ A AGG E+  +A  
Sbjct: 72  DPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGE 131

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L +MY R+A  + +KTE +++   E  G K     +KG + Y  +K E GVHR+ R+   
Sbjct: 132 LYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKT 191

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   D +E+EI+E+D RID YRA G GGQ VNTTDSAVRITH+P
Sbjct: 192 ESQGRIHTSTATVAVLPEA-DEVEVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITHLP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VVQ Q ++SQ +NK  A  +LRA+LY  E    E+ A  G     +IG G    +IR
Sbjct: 251 SGLVVQSQDQKSQLQNKIAAMAVLRARLY--EKMLAEQQAAEGAKRLAQIGSGDRSEKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +Y   P   V D R      + + VL GD L D + A  A  +
Sbjct: 309 TYNG-PQDRVTDHRIGF-NGTYNGVLLGDGLGDVITALQAADR 349


>gi|159899315|ref|YP_001545562.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892354|gb|ABX05434.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 365

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 167/349 (47%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN +   P    + +    L RE+  L   +   +E             L
Sbjct: 9   LARVEARYIELNDEMTQPDALSDHVRLTTLAREQTELGELVGRYREFMQAEKSVEEAKAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  + +     +  +   +E    +   LL      D  +  +E+  G GG E+ 
Sbjct: 69  LREENDPELREMAQLEIDELSARMEAIGAEVRVLLLPRDPNDEKNVIIEIRQGEGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMY R+AE R +KTE + + +    G K     ++G  A+  LK E GVHR+ 
Sbjct: 129 LFGADVYRMYQRYAEIRGWKTEVMSLSENGIGGFKEVIFEVQGQGAWSRLKYEGGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P V+++  +EI + D RID YR+ G GGQ VNTTDSAVR
Sbjct: 189 RVPATEARGRIHTSTITVAVLPEVEETA-VEIKQEDYRIDVYRSGGHGGQGVNTTDSAVR 247

Query: 252 ITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           I +    P  +VV CQ  RSQ KN+  A N+LRA+LY  E +KR+    +GES   ++G 
Sbjct: 248 IVYKAGTPEEIVVVCQDTRSQIKNRESALNVLRARLYAREQEKRQ--KELGESRLAQVGS 305

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G    ++R+Y   P   + D R     ++   VLDG LD  + A +   
Sbjct: 306 GERAEKMRTYNY-PQDRITDHRIGQNISNLPVVLDGALDRLIDALVTFD 353


>gi|294790651|ref|ZP_06755809.1| peptide chain release factor 1 [Scardovia inopinata F0304]
 gi|294458548|gb|EFG26901.1| peptide chain release factor 1 [Scardovia inopinata F0304]
          Length = 365

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 171/342 (50%), Gaps = 12/342 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           AV     +  +   P +  N  + + L R    L   ++  ++ +    D     E A E
Sbjct: 13  AVDEYHDIERQMSQPEIASNPDKIRKLGRRHAELAQIVTAYQDYKRLSDDLDAAKEFAAE 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S   E     +++    E  +   +     D+ D  +E+ AGAGG E+  +A  LL
Sbjct: 73  --DDSFAAEAQRLEEKLPAAEEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAGDLL 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQGVHRLV 191
           RMYTR+AEKR + TE +  +  E  G+K   +  +   A       +  LK E GVHR+ 
Sbjct: 131 RMYTRYAEKRGWATEIMSQNMTELGGVKDIQIAFRNKGAVAPEDGVWASLKYEGGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  DD  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 191 RIPVTESQGRIQTSAAGVIVFPEADDDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWG 309
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  ++ ++  +E A++  S    +   
Sbjct: 251 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEEEAQEAADMRHSQVRSLDRS 310

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 311 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 351


>gi|145352937|ref|XP_001420790.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581025|gb|ABO99083.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 343

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 100/334 (29%), Positives = 170/334 (50%), Gaps = 13/334 (3%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQET 88
             DP +  +  E + L +    L + +      ++ + +      +A +   D  ++   
Sbjct: 1   MADPSVTGDPKEFQKLSKALGELTSVVEQYARYKECMKEISEARAMAKDAAGDDEMVAMA 60

Query: 89  SDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            + +  +  E    VE      L     D  +  LE+ AG GG E+  WA  L RMY R+
Sbjct: 61  KEEIDALTTESDALVETMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWAGDLYRMYMRF 120

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE+  ++T  +  +  +  G K   + IKG + Y  LK E GVHR+ R+   ++  R  T
Sbjct: 121 AEREGWQTSVVTNNPADAGGYKEIVVEIKGDDVYSSLKWEAGVHRVQRVPATETQGRIQT 180

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P V D +E++I ++D  I T R+ GAGGQ+VN  ++A+ + H PTG+ V C 
Sbjct: 181 STATVAVMPEV-DEVEVKIDDNDLDISTARSGGAGGQNVNKVETAIDLMHKPTGIRVFCT 239

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
           +ER+Q KN+ +A  +LRAKL+EL+L   E+   + +  K+++G G    +IR+Y  +   
Sbjct: 240 EERTQMKNRIRAMQILRAKLFELQL--EEQRKAVSDKRKSQVGSGSRSEKIRTYNWKDS- 296

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            V D R      S  + LDGD+   +    A+++
Sbjct: 297 RVSDHRIG-ANFSLQNFLDGDIKGAIGGMQALEQ 329


>gi|328947853|ref|YP_004365190.1| peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
 gi|328448177|gb|AEB13893.1| Peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
          Length = 361

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 175/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R + ++    D  L ++  + K  MRE Q L   +S   E +  L        L
Sbjct: 7   LEDLSVRYTVVSELIGDASLIKDQKKYKETMREHQQLTELMSLYDEYKKILKGIEDATVL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  + +   + L+ ++ +        + + +     D  +  LE+ + AGG E+ 
Sbjct: 67  ITEEEDRDMKELAREELKELEEKKPKLEEEIKLKLIPPDPLDEKNIILEIRSAAGGDEAS 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L  MY   AE++ +KTE +E  + E  G       I G   YG L+ E GVHR+ 
Sbjct: 127 LFVRDLWEMYMHLAERKGWKTETMEAQETEVGGFNKIVTSIAGKFVYGTLRWESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS  ++ V P  +++ EI+I   D R+D  RA G GGQ VNTTDSAVR
Sbjct: 187 RVPATESQGRLQTSTVTVAVLPEAEET-EIQIRPEDVRVDVMRAGGPGGQCVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           +THIPTG+VV  Q E+SQHKNK +A+ +LRA+L++LE  KR+ E A+  ++         
Sbjct: 246 LTHIPTGIVVIQQDEKSQHKNKDKAFRVLRARLFDLEESKRQSERADARKNMVGSGARSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+   +    + G++D+ + A 
Sbjct: 306 KIRTYNF-PQDRVTDHRINLSLHNLPSFMMGNMDEMLDAL 344


>gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str.
           Mississippi]
          Length = 359

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  +  DP     V    +  RE   L   +S ++E Q    +   L  L
Sbjct: 7   LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLVEEYQTAQKEIEELEGL 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D D  ++    + L   +  +       Q   L   + DS  A LE+ AG GG E+
Sbjct: 66  INSTDTDAELVHLAKEELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+L I G + +  LK E GVHR+
Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P V + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLPEV-EEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK  +EI+ + +S        
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDEISKMRKSQIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
            +IR+Y       + D R N+       ++ +GDLD+F+ A +A  +
Sbjct: 305 ERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350


>gi|326510949|dbj|BAJ91822.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 411

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +    ++ +  DP +  +  E + L +   +L   ++   E ++          L
Sbjct: 54  LDSTEKAWKEMSIRLGDPDIVSDPGEYQKLAQSVSNLGEVVTAYGEFKECERQIEETKAL 113

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
             E  DD  + +  +  L+ +  ++   +       L S   +S +  LEV AG GG E+
Sbjct: 114 QKENGDDPDMAEMIASELESLSDQLAELEERLTVLLLPSDPLNSRNILLEVRAGTGGDEA 173

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY R+ E   +K + +   + E+ G K+  + +KG   Y  LK E GVHR+
Sbjct: 174 GIWAGDLVRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRV 233

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +++ I   D  +   R+ GAGGQ+VN  ++A+
Sbjct: 234 QRVPQTETMGRVHTSTATVAIMPEA-DEVDVVIDPKDIELKAARSGGAGGQNVNKVETAI 292

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE++L  RE+  +I      ++G G 
Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKL--REQQESIRTQRLLQVGTGA 350

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +     S  L GD++  +++  A+++
Sbjct: 351 RSEKIRTYNYKD-NRVTDHRLKM-NFILSSFLLGDIESAIQSCAALEQ 396


>gi|32267276|ref|NP_861308.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
 gi|46576742|sp|Q7VFA0|RF1_HELHP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32263329|gb|AAP78374.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
          Length = 355

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 183/340 (53%), Gaps = 11/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            V R   +++      +  N+ +   L +E+  +++     K     L + +    L  +
Sbjct: 9   IVARYDEISSLLSSESVLSNIKQLTELSKEQSDIESIAQNAKTYFSILENIVQNKALLED 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136
           ++   + +E   +L+  K  +E  + + LL      D+ + YLE+ AG GG E+  +   
Sbjct: 69  KELGELAKEELKDLESAKATLEE-EIKLLLIPKDPNDNKNIYLEIRAGTGGDEAGIFVGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+A+ +K+K E +  ++    G K    L+KG  AY  LK E G HR+ R+   
Sbjct: 128 LFKAYCRYADLQKWKVEIISSNENNVGGYKEVIALVKGNGAYSKLKFEGGTHRVQRVPET 187

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P V D +EI I+ +D +ID +R+ G GGQ VNTTDSAVRITHIP
Sbjct: 188 ESQGRIHTSAITVAIMPEV-DDVEININPNDLKIDVFRSGGHGGQSVNTTDSAVRITHIP 246

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V  Q E+SQHKNK +A  +L+A+LYE EL    + A   E+ KT++G G    +IR
Sbjct: 247 TGISVSMQDEKSQHKNKDKALKILKARLYEAEL--EAQNAQNKEARKTQVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           +Y   P   + D R  +   S  +++ G  LD+F+   +A
Sbjct: 305 TYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDEFINPLIA 343


>gi|190893591|ref|YP_001980133.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
 gi|190698870|gb|ACE92955.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
          Length = 351

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 3   ELERRFDEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLDTLL 58

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  +K  +E  + E     L    AD   A LE+ AG GG+E+ 
Sbjct: 59  EDKAVDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 119 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 179 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G  
Sbjct: 238 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDR 294

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 295 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 337


>gi|222087303|ref|YP_002545840.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
 gi|254790855|sp|B9JB75|RF1_AGRRK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221724751|gb|ACM27907.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
          Length = 359

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 173/344 (50%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I++ +  + +   L  + 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVAKIRDYEKAIAEASDLEAML 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  +K  +E  +       L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADKSVDREMRDLADMELPEVKERIEVLEQDIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A    +K E L   DGE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVIATITGKGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++L+++E   +   +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLFDMER--QRADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++D+ + A  A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIDEVVDALRA 345


>gi|15616790|ref|NP_240002.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681545|ref|YP_002467930.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682101|ref|YP_002468485.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471228|ref|ZP_05635227.1| peptide chain release factor 1 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11134308|sp|P57268|RF1_BUCAI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790868|sp|B8D8X1|RF1_BUCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790869|sp|B8D775|RF1_BUCAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299668|pir||H84949 peptide chain release factor 1 [imported] - Buchnera sp.  (strain
           APS)
 gi|10038853|dbj|BAB12888.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621834|gb|ACL29990.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624388|gb|ACL30543.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311085914|gb|ADP65996.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087068|gb|ADP67148.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 361

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 116/338 (34%), Positives = 174/338 (51%), Gaps = 3/338 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   +       ++  N    K L +E   L   I +  E +    D   +  L
Sbjct: 9   LKSLRNRYQEIEIMLTQKNVISNRENLKTLSKEYLKLSEIIKYFIEWEKLEVDIENVNIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E      + K  +E K  + LL     D +  ++E+ +  GG ES  +A
Sbjct: 69  LNDVEIQGMAEEELYFFNKKKKALEKKINQLLLPEDPNDKHSCFIEIRSATGGDESSIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE   +K E +   + E+ G K     I G  A G LK E G HR+ R+ 
Sbjct: 129 GELFRMYLRYAESYSWKVEIMNTSESEKGGFKEIIAKITGRGACGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V PV   + + EI+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSTCTVAVMPVTPKTEKEEINSSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           IPTG VV+CQ ERSQHKNKA+A ++L A++Y  +L+K R+E +++ +          + R
Sbjct: 249 IPTGNVVECQDERSQHKNKAKALSILSARVYAAKLEKDRQESSSMRKILLGTGERSDRNR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   + D R N+      +VL G LD  +   +
Sbjct: 309 TYNF-PQNRITDHRINLSIYKLDEVLQGKLDLLIDPII 345


>gi|297243816|ref|ZP_06927746.1| protein chain release factor A [Gardnerella vaginalis AMD]
 gi|296888237|gb|EFH26979.1| protein chain release factor A [Gardnerella vaginalis AMD]
          Length = 365

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 167/344 (48%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    + ++   P +  N    + L R    L + ++     +    D     E+A  
Sbjct: 15  ALEEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMA-- 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            DD    +E     +++    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 73  SDDPDFAEEAKRLEEQLPAAKEKLRTALIPRDPDDACDMIMEIKAGTGGEEAALFAGDLL 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR + T     +  E  G+K   L I+           +  +K E GVHR+ 
Sbjct: 133 RMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQ 192

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 193 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 252

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 253 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 311 RSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDI 353


>gi|298377870|ref|ZP_06987820.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|301312251|ref|ZP_07218168.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
 gi|298265316|gb|EFI06979.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|300829673|gb|EFK60326.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
          Length = 322

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 127/315 (40%), Positives = 189/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E   EE      +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVKEEIITE--EEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTIDIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|255692994|ref|ZP_05416669.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
 gi|260621306|gb|EEX44177.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
          Length = 319

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 127/315 (40%), Positives = 191/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +   EE      ++      + +  VE  + +
Sbjct: 1   MKLVKDLQKWIDGYNEVKTLADELELAFDFYKEE--LVTEEDVDTAYAKAREAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNIET 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 ARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG ++DF+KA L 
Sbjct: 298 VMDGKIEDFIKAYLM 312


>gi|194398144|ref|YP_002037655.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
 gi|238690818|sp|B5E4D9|RF1_STRP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194357811|gb|ACF56259.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
          Length = 359

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V+  +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEVE-EVEXDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|297181089|gb|ADI17288.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_17D04]
          Length = 359

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 180/346 (52%), Gaps = 10/346 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  + R   + ++  D        E   L RE   L      I  ++    D    + LA
Sbjct: 8   DKVLARRDEVESRLADAASMS-PDELASLSRELFELRPVCEQIDLVRRLEGDRDAAVMLA 66

Query: 77  LEE-DDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E  DD  + +     +Q I+     E+   Q   L     DS +A LEV AG GG E+ 
Sbjct: 67  EEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 127 LFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I++ ESD RID +RASG GGQ VNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EDVDIDVQESDLRIDVFRASGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIPTG++V  Q E+SQHKN+A+A  +LRA+LY+ E  + + E A   +          
Sbjct: 246 ITHIPTGIMVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAERAASRKGQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+ G+ LD+ ++A +A  +
Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQ 350


>gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
 gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
          Length = 359

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  +  DP     V    +  RE   L   +S ++E Q    +   L  L
Sbjct: 7   LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLVEEYQTAQKEIEELEGL 65

Query: 76  ALEED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D D  ++    + L   +  +       Q   L   + DS  A LE+ AG GG E+
Sbjct: 66  INSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+L I G + +  LK E GVHR+
Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P V + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLPEV-EEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK  +EI+ + +S        
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDEISKMRKSQIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
            +IR+Y       + D R N+       ++ +GDLD+F+ A +A  +
Sbjct: 305 ERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350


>gi|213691478|ref|YP_002322064.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254790863|sp|B7GP74|RF1_BIFLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|213522939|gb|ACJ51686.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457551|dbj|BAJ68172.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 362

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +   P +  N  + + L R    L   +   K       D     E+A E
Sbjct: 12  ALEEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DADFAEEAKRLEAELPGVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AEKR +       +  E  G+K   + I+           +  +K E GVHR+ 
Sbjct: 130 RMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|23466257|ref|NP_696860.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227546609|ref|ZP_03976658.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239621640|ref|ZP_04664671.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312134004|ref|YP_004001343.1| prfa [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482079|ref|ZP_07941103.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689793|ref|YP_004209527.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691739|ref|YP_004221309.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|81753501|sp|Q8G3P5|RF1_BIFLO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23327005|gb|AAN25496.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227212926|gb|EEI80805.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239515515|gb|EEQ55382.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291516325|emb|CBK69941.1| bacterial peptide chain release factor 1 (bRF-1) [Bifidobacterium
           longum subsp. longum F8]
 gi|311773307|gb|ADQ02795.1| PrfA [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916438|gb|EFV37836.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456595|dbj|BAJ67217.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320461129|dbj|BAJ71749.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 362

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +   P +  N  + + L R    L   +   K       D     E+A E
Sbjct: 12  ALEEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQVKDDLAAAQEMAGE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 72  --DADFAEEAKRLEDELPGVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AEKR +       +  E  G+K   + I+           +  +K E GVHR+ 
Sbjct: 130 RMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|283783535|ref|YP_003374289.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
 gi|283441331|gb|ADB13797.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
          Length = 365

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 167/344 (48%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    + ++   P +  N    + L R    L + ++     +    D     E+A  
Sbjct: 15  ALEEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMA-- 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            DD    +E     ++I    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 73  SDDPDFAEEAKRLEEQIPAAKEKLRTALIPRDPDDARDMIMEIKAGTGGEEAALFAGDLL 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR + T     +  E  G+K   L I+           +  +K E GVHR+ 
Sbjct: 133 RMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQ 192

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 193 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 252

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 253 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 311 RSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDI 353


>gi|255079106|ref|XP_002503133.1| predicted protein [Micromonas sp. RCC299]
 gi|226518399|gb|ACO64391.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +++ +    L  +  DP +  +  E + L +    L   +      ++   +     E+
Sbjct: 11  LESSERTHKELTFRLADPDVASDAKEFQKLSKALGELTGVVDMYARYKECQAEEADAREM 70

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + +  +K E++  +       L     D  +  LE+ AG GG E+
Sbjct: 71  VKDAAGDAEMEAMAREEIAALKGEMDELEEKMTIALLPKDPLDDKNIMLEIRAGTGGDEA 130

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+ + +    L  +  +  G K   + I G + Y  LK E GVHR+
Sbjct: 131 GIWAGDLWRMYQRYAQSKGWSATILSSNAADFGGYKEIVVEINGDSVYSELKWEAGVHRV 190

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS +++ V P V D +E++I + D  I + R+ GAGGQ+VN  ++A+
Sbjct: 191 QRVPATESQGRVQTSTATVAVMPEV-DEVEVKIDDKDIEISSARSGGAGGQNVNKVETAI 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ER+Q KN+ +A+ +LRAKL+E++L   E+   I    K ++G G 
Sbjct: 250 DLLHKPTGIRVFCTEERTQLKNRIRAFQILRAKLFEIQL--EEQQKEIAGRRKAQVGSGA 307

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +     + + GD+   +    A+++
Sbjct: 308 RSEKIRTYNWKDS-RVSDHRLG-QNFPLDNFIGGDIGPAIGGCQAMEQ 353


>gi|171057271|ref|YP_001789620.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
 gi|238689096|sp|B1XYX1|RF1_LEPCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170774716|gb|ACB32855.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
          Length = 360

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 116/336 (34%), Positives = 181/336 (53%), Gaps = 7/336 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ ++    DP +   +   + L RE   +   +   +  + R  D     EL  E + 
Sbjct: 15  RLAEIDAALADPKVCSQIGTLRSLNREHARVSALVDRWQRYEQREQDLAGAQELLDEPEM 74

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWANMLLRM 140
             + +      Q     ++ +   +L+  +AD   +A++E+ AG GG ES  +A  L RM
Sbjct: 75  AELARAEIGAAQADLDRLDSELLTALMPRDADDDRNAFVEIRAGTGGEESALFAADLARM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R AE+R +KTE +     +  G K   L I G   +  LK E G HR+ R+   ++  
Sbjct: 135 YLRHAERRGWKTELMSESVSDLGGYKDVVLHIIGDAVFEALKYESGGHRVQRVPATEAQG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V    D++ E+ ++ ++ RIDTYRASGAGGQH+N TDSAVR+TH+PTG+V
Sbjct: 195 RIHTSACTVAVLAEADEAEEVSLNPAELRIDTYRASGAGGQHINKTDSAVRVTHLPTGLV 254

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
            +CQ +RSQH+NKA+A  +L A+L +    ++E+ A    + K+ IG G    +IR+Y  
Sbjct: 255 AECQDDRSQHRNKARALAVLAARLRD--RVRQEQAAKDAAARKSLIGSGDRSDRIRTYNF 312

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            P   + D R N+       VL+GDLD+ + A  A 
Sbjct: 313 -PQGRLTDHRINLTLYKLGAVLEGDLDEVIGALQAA 347


>gi|325300471|ref|YP_004260388.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
 gi|324320024|gb|ADY37915.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
          Length = 370

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 169/352 (48%), Gaps = 16/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + L + +    E    L        +
Sbjct: 12  LDGLVARFEEVSTLITDPSVIADQKRYVKLTKEYKELSDIMKARGEYLQCLNGLEEAK-M 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + E+D  + +   +     +  +    E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 71  MMGENDPELKEMAREEAAACEARIPELEEEIKLLLIPADPQDDRNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E++ +K E     +G   G K     + G   YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYSKYCERKGWKLEVSSASEGASGGFKEIICSVTGDKVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   +  ++EI+E + + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGVV    ++C + R Q KNK +A   LR  +Y+ E QK  ++IA+  ++ 
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALARLRTFIYDKEHQKYIDDIASKRKTM 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|146277160|ref|YP_001167319.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17025]
 gi|166223594|sp|A4WRK0|RF1_RHOS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145555401|gb|ABP70014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 351

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 176/345 (51%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+R  FL  +           E   L RE   L   ++ I   +  L D      +
Sbjct: 7   LLQIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEIAAYRTALEDLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D L R++  +   +       L    AD+  A LE+  G GG E+ 
Sbjct: 64  LA---DPEMRALAEDELPRLRARIPEMEQALRLALLPRDAADARPAILEIRPGTGGEEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ E L++   E  GI+ AT  I+G  A+  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYQRYAEAQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 181 RVPETEAQGRIHTSAATVAVLPEA-EEVDIAIPAADIRIDTMRSSGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG+VV    E+SQH+N+  A  +LRA+LY+LE Q+  E  +   ++         
Sbjct: 240 ITHLPTGIVVTSS-EKSQHRNREIAMQVLRARLYDLERQRLAEARSADRKAQVGSGDRSE 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 299 RIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLAEVIAALTAHDQ 342


>gi|317968845|ref|ZP_07970235.1| peptide chain release factor 1 [Synechococcus sp. CB0205]
          Length = 367

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 165/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  N  + + + RER  L+  +    ++           +L
Sbjct: 10  LETARTTFETLERQLADPDVAANPAQLEPIARERARLEPLVLGYDQLCQWRKQEQEARQL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +     + L  +  ++   +       L     D     LE+ AGAGG E+
Sbjct: 70  LKESRGDQEMEALAQEELSGLATQIAAMEEQLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+   +K + +   + E  G K   L I+G + +  LK E GVHR+
Sbjct: 130 AIWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIQGDSVFSQLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVQIDPTDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE EL   E  A    +   ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYEREL--AEANAKERSARLAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   VL G L + + A ++  +
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLG-RNFSLEPVLQGQLAELIGACVSADQ 352


>gi|124024025|ref|YP_001018332.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964311|gb|ABM79067.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9303]
          Length = 367

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   + +Q    +     +L
Sbjct: 12  LETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQL 71

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D ++     + LQ+++      V       L S   D     LE+ AGAGG E+
Sbjct: 72  LRESRGDEAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ ++  +  + L   + +  G +   L IKG   +  LK E GVHR+
Sbjct: 132 CLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHRV 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E++I  S+  I T R+ GAGGQ+VN  ++AV
Sbjct: 192 QRVPTTESQGRVHTSTATVAVMPEA-DAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL  LE Q  E  A    + + ++G G 
Sbjct: 251 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKL--LERQIAEANARESSTRRAQVGTGD 308

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   VL G L++ + A +A ++
Sbjct: 309 RSEKIRTYNYKD-NRTTDHRLG-RNFSLEPVLTGQLEELIGACIAEEQ 354


>gi|298252617|ref|ZP_06976411.1| protein chain release factor A [Gardnerella vaginalis 5-1]
 gi|297532981|gb|EFH71865.1| protein chain release factor A [Gardnerella vaginalis 5-1]
          Length = 366

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 167/344 (48%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    + ++   P +  N    + L R    L + ++     +    D     E+A  
Sbjct: 16  ALEEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMA-- 73

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            DD    +E     ++I    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 74  SDDPDFAEEAKRLEEQIPAAKEKLRTALIPRDPDDARDMIMEIKAGTGGEEAALFAGDLL 133

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR + T     +  E  G+K   L I+           +  +K E GVHR+ 
Sbjct: 134 RMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQ 193

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 194 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 253

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 254 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 311

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 312 RSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDI 354


>gi|157964580|ref|YP_001499404.1| peptide chain release factor 1 [Rickettsia massiliae MTU5]
 gi|166977368|sp|A8F1S1|RF1_RICM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157844356|gb|ABV84857.1| Peptide chain release factor RF-1 [Rickettsia massiliae MTU5]
          Length = 361

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 184/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L++ ++ IKE      +       
Sbjct: 7   LAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIQIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++Y E   +K +E A+            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|224437763|ref|ZP_03658710.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313144209|ref|ZP_07806402.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313129240|gb|EFR46857.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
          Length = 354

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 21/345 (6%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLEL 75
            V R   +++      +  +V +   L +E+  ++  +        + + + DN  LLE 
Sbjct: 9   IVARYDEISSLLLSQEILSSVKQLTQLSKEQSDIEPIVQSAKMYFSVLEGIADNRALLE- 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   + L+ ++ +     E  +   +     DS + YLE+ AG GG E+ 
Sbjct: 68  -----DKELGELAKEELKELESKKAELEEEIKLLLIPKDPNDSKNIYLEIRAGTGGDEAG 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L + Y R+A+ +K+K E +   +    G K    LIKG  +Y  LK E G HR+ 
Sbjct: 123 IFVGDLFKAYCRYADLQKWKVEIISSSENNVGGYKEVIALIKGQGSYSKLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P V D +E+ I+ SD +ID +R+ G GGQ VNTTDSAVR
Sbjct: 183 RVPETESQGRIHTSAITVAIMPEV-DDVEVNINPSDLKIDVFRSGGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+ V  Q E+SQHKNK +A  +L+A+LYE EL    + A   E+ KT++G G  
Sbjct: 242 ITHIPTGISVSMQDEKSQHKNKDKALKILKARLYEAEL--EAQNAQNKEARKTQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             +IR+Y   P   + D R  +   S  +++ G  LD+ +   +A
Sbjct: 300 SERIRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDECINPLIA 343


>gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1]
 gi|166223608|sp|A5V9C3|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas
           wittichii RW1]
          Length = 360

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 171/344 (49%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L        L  +      L ++   ++       E++    +  +L  +
Sbjct: 9   IAQIEARRDELQALMARGDLPSDQ--FVQLSKDYAEIEPVAQAAGEVRRLRAELDVLKGM 66

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
           A +E  D  +     +  + I+  +   +     + L    AD   A LE+ AG GG E+
Sbjct: 67  AEDEAGDAELRAMAIEEAEEIRARLPEAERALALKLLPRDAADERSAMLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE R ++ E +     +  G K     + G   +  LK E GVHR+
Sbjct: 127 ALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASVTGAGVFARLKFESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +++ I + D RID YR+SG GGQ VNTTDSAV
Sbjct: 187 QRVPVTESGGRIHTSAATVAVLPEA-EEVDVHIDDKDLRIDVYRSSGPGGQSVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITH+PTG+VV  Q E+SQHKNKA+A  +LR +LYE+E ++   E A   +S        
Sbjct: 246 RITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEMERERLASERAGARKSMVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
            +IR+Y   P   V D R N+     S++L+G  LDD + A +A
Sbjct: 306 ERIRTYNF-PQGRVTDHRINLTLHRLSEILEGPGLDDLVGALIA 348


>gi|183602493|ref|ZP_02963858.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683536|ref|YP_002469919.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190567|ref|YP_002967961.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195973|ref|YP_002969528.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|254790862|sp|B8DTL4|RF1_BIFA0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183218134|gb|EDT88780.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621186|gb|ACL29343.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248959|gb|ACS45899.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250527|gb|ACS47466.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793554|gb|ADG33089.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 365

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 167/344 (48%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A++    +  +  +  +W N  + + L R +  L   ++  +   +   D     E+A E
Sbjct: 12  ALEEYENIERQMGEQEVWSNPDKMRKLGRRQAQLGTIVNAYRTWLNIRNDLDAAQEMAGE 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D    QE       +    E  +   +     D+ D  +E+ AGAGG E+  +A  LL
Sbjct: 72  --DPDFAQEAKRLESELPEAEEKLRTALIPRDPDDARDVIMEIKAGAGGEEAALFAGDLL 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR +       +  E  G+K   + I+           +  LK E GVHR+ 
Sbjct: 130 RMYMRYAEKRGWGVTIQSENSTELGGVKDVQMAIRAKGNPSPEEGVWASLKYEGGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 190 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 250 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 308 RSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 350


>gi|254521606|ref|ZP_05133661.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
 gi|219719197|gb|EED37722.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
          Length = 360

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 106/321 (33%), Positives = 168/321 (52%), Gaps = 8/321 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P +  +    + L RE   L+   + + +      D      +  + D   +  E     
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPVAAALADEARAKADLAAAEGMRADPDLRELADEEIGAA 85

Query: 93  Q-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           Q R++   +      +     D  + +LEV AG GG E+  +A  L RMY R+AE++ +K
Sbjct: 86  QTRLQQLEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + GE  G K     + G  A+  LK E G HR+ R+   +S  R HTS +++ +
Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  +I I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH 
Sbjct: 206 IPETDEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328
           N+ +A   L+A+L + E   + + A   ES + ++G G    +IR+Y   P   + D R 
Sbjct: 266 NRDKAMKRLKAQLLDAER--QRQDAAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322

Query: 329 -NIEKTSPSDVLDGDLDDFMK 348
             +      ++L GDLD  ++
Sbjct: 323 EGLTLYDLPNILAGDLDPLLQ 343


>gi|297180848|gb|ADI17053.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_30A23]
          Length = 358

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 185/351 (52%), Gaps = 20/351 (5%)

Query: 16  WDNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            +  V+R   +     D   P       +   L RE   ++  +  ++  Q  + D    
Sbjct: 8   LETVVRRHEEIQALLADHPEPG----SADYTKLTREYAEMNPIVEEMRAFQKSVQDLEDA 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGT 128
             LA  EDD  +     D  + ++ E++  +       L   EADS +A LE+  G GG 
Sbjct: 64  RALAASEDDADMRAMAEDEARELQAEIDATEQRMKVLLLPRDEADSRNAILEIRPGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LL MY R+AE + +K E LE+ + +  G+K  +  I G N +  LK E GVH
Sbjct: 124 EAGLFAGDLLAMYRRYAELQGWKFEILEMSENDVGGLKEVSAKINGTNVFAALKFESGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++IEI   D RIDT RASGAGGQHVNTTDS
Sbjct: 184 RVQRVPMTESGGRIHTSAATVAVLPEA-EDVDIEIKAEDIRIDTMRASGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG++V  Q ++SQH+N+ +A  +LRA+LY  E  + E  A    + K ++G 
Sbjct: 243 AVRITHLPTGIIVT-QSQKSQHRNREEAMRVLRARLY--EKAREEANAERAANRKGQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       ++ GD L + ++A  A  +
Sbjct: 300 GDRSERIRTYNY-PQGRVSDHRINLTLHKLDRIVAGDGLGEVIEALTAEDQ 349


>gi|189025285|ref|YP_001933057.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|238689313|sp|B2S1Z9|RF1_TREPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189017860|gb|ACD70478.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059466|gb|ADD72201.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 351

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 111/348 (31%), Positives = 183/348 (52%), Gaps = 14/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            +    +   L  + E+P L+ +    +  MR+  +L   +         + +L D  +L
Sbjct: 5   LEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLEDAHVL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGT 128
           ++   +E D          ++ ++  +    K+ ++LL         +  +E+  G GG 
Sbjct: 65  IQ---DESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDPLQEKNIIMEIRGGTGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYT +AE ++++ E L + + E  G K  T  I G + YG L+ E GVH
Sbjct: 122 EAALFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +++ R HTS  ++ V P ++++ E++I   D R+D  RASG GGQ VNTTDS
Sbjct: 182 RVQRVPSTEASGRIHTSAVTVAVLPEMEET-EVDIRAEDVRVDVMRASGPGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           AVR+TH+PTG+VV CQ E+SQ KNKA+A  +LR+++Y+LE  KR+   A   +S      
Sbjct: 241 AVRLTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQVARARERKSQVGSGD 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
              +IR+Y   P   V D R  +       V+ G LDD ++   +A +
Sbjct: 301 RSERIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIEPLCIASR 347


>gi|189182919|ref|YP_001936704.1| peptide chain release factor 1 [Orientia tsutsugamushi str. Ikeda]
 gi|238692229|sp|B3CQD1|RF1_ORITI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189179690|dbj|BAG39470.1| peptide chain release factor RF-1 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 359

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 127/345 (36%), Positives = 184/345 (53%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +Q+   L        L  +  E  ++ +E  +L   I  +        +   L ++
Sbjct: 7   LNKILQKYQDLEADLNGGKL--DNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQV 64

Query: 76  ALEEDDCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +      E  D L  +    E  +   L     D  +A +EV AG GG E+ 
Sbjct: 65  IDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE++K+K E L I D E  G K A+ LI G   +  LK E GVHR+ 
Sbjct: 125 LFAASLFQMYNRYAERKKWKFELLSISDTEIGGYKEASALISGNGVFANLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R HTS +++ V P   + ++++I   D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 185 RIPKTESNGRIHTSAATVVVLPEA-EEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVVV  Q E+SQHKNKA+A  +L A+LY+LE  K++       S K ++G G  
Sbjct: 244 ITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLE--KQKSQQEQAMSRKVQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   V D R N+      +++ +G LD+ +   ++
Sbjct: 302 SERIRTYNY-PQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLIS 345


>gi|304394129|ref|ZP_07376052.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
 gi|303293569|gb|EFL87946.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
          Length = 358

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 176/345 (51%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +  V R + +     + P    +      L +E   LD  +  I E+Q    +   L  
Sbjct: 7   IEQLVSRHAEVARLMSENP----DQETYVKLAKEYAELDPVVIKIGEMQAAQSEFADLAG 62

Query: 75  LALEED-DCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  + D D  + +     ++ +K  +E      Q   L   EAD+ +A LE+ AG GG+E
Sbjct: 63  MLADGDTDAEMKEMAQAEMEPLKAAIEEHEAELQILLLPRDEADAKNAILEIRAGTGGSE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R AE   +K + L    GE  G K     I G   +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRHAETSGWKVDVLSESAGEVGGYKEIIASINGTGVFARLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++IEI   D RIDT RASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESGGRVHTSAATVAVLPEA-EDVDIEIRNEDIRIDTMRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGW 308
           VRITHIPTGVVV    E+SQH+N+A A   LR +LY++E QK  +E A+  +        
Sbjct: 242 VRITHIPTGVVVLST-EKSQHQNRANAMKELRTRLYDMERQKVDQERADSRKGQVGSGDR 300

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             +IR+Y   P   V D R N+       ++ G+ LD+ + A + 
Sbjct: 301 SERIRTYNF-PQGRVSDHRINLTLYKLDKMIAGEGLDEMLDALIT 344


>gi|284046083|ref|YP_003396423.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
 gi|283950304|gb|ADB53048.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
          Length = 349

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R   L  +  DP +  +        R+ + L+ A     E +  + D     EL  
Sbjct: 8   QVESRFQELEAQMSDPEVIGDRQRYAETGRQYRDLEEAARLAAEWRRAVDDEAGARELLE 67

Query: 78  EE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           E  DD  +    +   +RI    E  +   +    AD  +  +E+  GAGG E+  +A  
Sbjct: 68  EGGDDAEVRDMLARARERIDALDEEIRLAMVEKDPADEKNVIVEIRPGAGGDEAGLFAGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RM TR+AE+R FKTEAL   DG        T  +KG  AY   K E G HR+ R+   
Sbjct: 128 LYRMLTRYAERRGFKTEALSESDG------QYTFAVKGEGAYSVFKFEGGTHRVQRVPET 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   + +++E++++D ++D YR+SG GGQ VNTTDSAVRITH P
Sbjct: 182 ESQGRIHTSTATVAVLPEA-EEVDVEVNDNDLQVDVYRSSGPGGQSVNTTDSAVRITHKP 240

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VV  Q E+SQ +N+ +A  +LRA+LYE  L   E+ A +  +   ++G G    +IR
Sbjct: 241 SGIVVSMQDEKSQLQNRDKAMRVLRARLYEAAL--AEQQAELSATRLAQVGSGERAEKIR 298

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +   +    L G+LDD   A    +K
Sbjct: 299 TYNF-PQGRITDHRIKLTVHNLDAALAGELDDVTDALQDDEK 339


>gi|282879521|ref|ZP_06288252.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
 gi|281306469|gb|EFA98498.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
          Length = 370

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 159/352 (45%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LEGLEARFEEVSTLITDPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  +       E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 71  LANETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY  + + + +      +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DQFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IAN  +S 
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYIDDIANRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R           + GD+   + A    +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDIQGVIDALTVAE 360


>gi|294010049|ref|YP_003543509.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
 gi|292673379|dbj|BAI94897.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
          Length = 363

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 178/346 (51%), Gaps = 13/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +        L     E   L +E   ++       E++    +   L  +
Sbjct: 8   IAQIEARRDEVQASMTRADLA--PEEFVRLSKEYAEIEPVAKAAHEVRRLRQELSALEYM 65

Query: 76  ALEED---DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
           A  ED   D  + +   + +Q IK  +   +     + L    AD+  A LE+ AG GG 
Sbjct: 66  AGGEDADSDPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+A+ + +K E +  +  E  G K     + G   +  LK E GVH
Sbjct: 126 EAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGTGVFAKLKFESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++++I++SD +ID YRASGAGGQHVNTTDS
Sbjct: 186 RVQRVPVTESGGRIHTSAATVAVLPEP-EEVDVQIADSDLKIDIYRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIG 307
           AVRITH+P+G+VV  Q ERSQHKNKA+A  +LRA++YE E ++ + E A   ++      
Sbjct: 245 AVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEAERERAQSEQAGARKAMVGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
              +IR+Y   P   V D R N+      ++L+G  L + + A +A
Sbjct: 305 RSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVA 349


>gi|148284270|ref|YP_001248360.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
 gi|166223581|sp|A5CCS8|RF1_ORITB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146739709|emb|CAM79522.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
          Length = 359

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 125/343 (36%), Positives = 182/343 (53%), Gaps = 10/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +Q+   L        L  +  E  ++ +E  +L   I  +        +   L ++
Sbjct: 7   LNKILQKYQDLEADLNGGKL--DNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQV 64

Query: 76  ALEEDDCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +      E  D L  +    E  +   L     D  +A +EV AG GG E+ 
Sbjct: 65  IDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY ++AE++K+K E L I D E  G K A+ LI G   +  LK E GVHR+ 
Sbjct: 125 LFAASLFQMYNKYAERKKWKFELLSISDTEIGGCKEASALISGNGVFANLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R HTS +++ V P   + ++++I   D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 185 RIPKTESNGRIHTSAATVVVLPEA-EEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTGVVV  Q E+SQHKNKA+A  +L A+LY+LE QK ++   I    +   G    
Sbjct: 244 ITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQKSKQEQAISRKVQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +IR+Y   P   V D R N+      +++ +G LD+ +   ++
Sbjct: 304 RIRTYNY-PQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLIS 345


>gi|157828568|ref|YP_001494810.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933282|ref|YP_001650071.1| peptide chain release factor 1 [Rickettsia rickettsii str. Iowa]
 gi|166223598|sp|A8GSC7|RF1_RICRS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039987|sp|B0BXT9|RF1_RICRO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157801049|gb|ABV76302.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908369|gb|ABY72665.1| bacterial peptide chain release factor 1 (RF-1) [Rickettsia
           rickettsii str. Iowa]
          Length = 355

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L++ ++ IKE      +       
Sbjct: 7   LAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+E+  A+            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQARADSRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R ++      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|163850388|ref|YP_001638431.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218528948|ref|YP_002419764.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240137464|ref|YP_002961935.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254559642|ref|YP_003066737.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
 gi|226739112|sp|A9W1A4|RF1_METEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790888|sp|B7L246|RF1_METC4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163661993|gb|ABY29360.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218521251|gb|ACK81836.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240007432|gb|ACS38658.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254266920|emb|CAX22719.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
          Length = 361

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 172/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +  D     +      L RE   LD  ++ I   +    +   +  +
Sbjct: 9   LDAILARHDIVTAQLADGS--ADAGSIVQLSRELSELDGVVAAIHHYRLAEANLAGIRAM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +    ++     +  +       Q   L    AD   A LE+ AG GG E+
Sbjct: 67  IDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLILLPKDAADEKSAILEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE + ++ E +   +G   G +     +KG + +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVVAEVKGRSVFSRLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I ++E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLPEA-EEVDIVVNEADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITHIPTGVVV  Q+ERSQHKN+A+A ++LR+KL++ E   ++   A   ++        
Sbjct: 246 RITHIPTGVVVFVQEERSQHKNRARAMSLLRSKLFDAERTAKDSARAADRKAQVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ G  LD+ + A + 
Sbjct: 306 ERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGQALDEVIDALVT 348


>gi|281420644|ref|ZP_06251643.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
 gi|281405417|gb|EFB36097.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
          Length = 369

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 165/352 (46%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T   DP +  +      L +E + L + +   K   + L       ++
Sbjct: 10  LEGLESRYEEVSTLITDPDVIADQPRYVKLTKEWKDLGDIMDARKRYINCLNSIKEAKDI 69

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   + ++ ++E +   +L      D+ +  +E+  GAGG E+ 
Sbjct: 70  LANESDPEMKEMAREELNENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRGGAGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ E + +      + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 130 LFAGDLFNMYKKYCESKGWTVSVTSVSEGAVGGYKEIDFAVSGTDVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG V    ++C + R Q KNK +A + L   +++ E QK  ++IA+  +S 
Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIASRRKSL 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R        +  L GD+ D + A    +
Sbjct: 309 VSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLNGFLAGDIQDMIDALTVAE 359


>gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
 gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
          Length = 361

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 125/350 (35%), Positives = 183/350 (52%), Gaps = 19/350 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +D  + R   L        L ++   A+ L +E   L    + I E++    +   L E+
Sbjct: 7   FDKVMARYDELRDTLAA-GLAESGDFAR-LSKEYADLTPIAAAIAELKRGRAEAADLAEM 64

Query: 76  --------ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
                     + +  S+ +E    L +   E+E K Q   L   EAD  +A LEV AG G
Sbjct: 65  IAAMMGDSGADPEMRSMAEEEFHLLTKRIPELERKVQISLLPKDEADEKNAILEVRAGTG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+A    ++ EA+++ +    G K AT  I G   +  LK E G
Sbjct: 125 GDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEATANITGRGVFAKLKFESG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P   + ++I I E D RID +R+SG GGQ VNTT
Sbjct: 185 VHRVQRVPATEAQGRIHTSAATVAVLPEA-EEVDIHIDEKDLRIDVFRSSGPGGQSVNTT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV  Q E+SQHKNKA+A  +LRA+LY+ E    E+ A      K ++
Sbjct: 244 DSAVRITHLPTGLVVSQQDEKSQHKNKAKALKVLRARLYDRER--AEKDAARAADRKNQV 301

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           G G    +IR+Y   P   V D R N+       V+ G+ LD+ + A +A
Sbjct: 302 GSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDKVMAGEALDELVDALVA 350


>gi|227495018|ref|ZP_03925334.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
 gi|226831470|gb|EEH63853.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
          Length = 369

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++  + +     DP +  +  + + L +    L    +    +     D     E+A E
Sbjct: 14  LLEEYAQVEASLADPEVLADRTQQRKLAKRFSELSVIKNAADALSMAADDLEAAKEMAKE 73

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S   E  +    ++          +    AD+++  LE+ AG GG ES  +A  L 
Sbjct: 74  --DSSFAAEIPEMEVALEAAHARLVKILIPRDPADADNVILEIKAGEGGEESALFAAELA 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AE + +K + L        G+K  +L I            +  LK E GVHR+ 
Sbjct: 132 RMYTRYAETKGWKVKELSSTYTGLGGVKEVSLSIAAKSDVAPEDGVWAHLKFEGGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   +S  R HTS   + V P V+D  E + I ++D RID +R+SG GGQ VNTTDSAV
Sbjct: 192 RVPVTESQGRIHTSAVGVLVTPEVEDDTEDLVIDQNDLRIDVFRSSGPGGQSVNTTDSAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWG 309
           RITHIPTGVVV  Q E+SQ +NK  A  +LR++L +LE +K+E  A+   +S+   +   
Sbjct: 252 RITHIPTGVVVSMQNEKSQLQNKEAAMRVLRSRLIQLEREKKEAEASAMRASQVRTVDRS 311

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RT  +  + + VL+G+L   +++ + ++
Sbjct: 312 ERIRTYNF-PENRIADHRTGYKAYNLATVLEGELGPVIESAIVLE 355


>gi|225022790|ref|ZP_03711982.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305682007|ref|ZP_07404811.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
 gi|224944397|gb|EEG25606.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305658480|gb|EFM47983.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
          Length = 360

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP    +    + L +    L   +     ++    D     E+
Sbjct: 11  VDDIVSEYQGIEAQMSDPETVGDQALFRKLSKRYSELQPIMKVNTALEQARADLADAKEM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E  D     E  D L    +E+E K  + L      D +D  +E+ AGAGG E+  +A
Sbjct: 71  AYE--DSEFAPEA-DRLAGEVVELEEKLADLLAPRDPHDGDDIVMEIKAGAGGEEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L+RMY R+A+K  F TE L + + +  G+K  TL I+        A+   K E GVHR
Sbjct: 128 GELVRMYQRYADKHGFSTEVLGLSESDLGGVKDMTLSIRSKQPSRDGAWSVFKFEGGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  D+   +EI + D R+D YR+SG GGQ VNTTDSA
Sbjct: 188 VQRVPVTESQGRIQTSAAGVLVYPEPDEIAAVEIDDKDIRVDVYRSSGKGGQGVNTTDSA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  L  ++ E  A  G +++   +  
Sbjct: 248 VRITHLPTGIVVTCQKERSQIQNKARALQVLAARLQALAEEQAEAEAAQGRAAQIRTLDR 307

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL+GD++D   A    ++
Sbjct: 308 SERIRTYNW-PENRISDHRIGFKANNLDSVLNGDMEDLFTALRTAER 353


>gi|218259544|ref|ZP_03475251.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225027|gb|EEC97677.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
          Length = 322

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 133/315 (42%), Positives = 192/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  +   E       +E  +        VE  +F 
Sbjct: 1   MKKVKELKKWIELYNEVHAAAEELQLAYDYVKEGIVSE--EEVDEAYGNAIQLVESLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+MLLRMYTRWAE   +K       +G+EAGI
Sbjct: 59  NMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++I +
Sbjct: 119 KTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKIDQ 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R E     E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|89070966|ref|ZP_01158192.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
 gi|89043473|gb|EAR49687.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
          Length = 351

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 175/341 (51%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  V R  +L  +  +  P       E   + RE   L   +  I   +    +     
Sbjct: 7   LDQIVARQQYLEARMAEGAPG-----AEMIAIAREYSDLKPVVETIARYRALTAELEEAQ 61

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +  E +   + +E    L+    E E   +   L    AD+  A +E+  G GG E+  
Sbjct: 62  AMLAEPEMRGLAEEEIARLKEALPEAEQALRLALLPRDAADARPAMIEIRPGTGGEEAAL 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+A+ + +  E ++    E  GI+  T  + G   +  LK E GVHR+ R
Sbjct: 122 FAADLLRMYQRYADAKGWSFEIIDEQATELGGIRELTARVAGDGVFARLKFESGVHRVQR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   D ++I+I+ +D RIDT RASGAGGQHVNTTDSAVRI
Sbjct: 182 VPETESGGRIHTSAATVAVLPEAAD-VDIDIAPADIRIDTMRASGAGGQHVNTTDSAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+VV    E+SQH+N+  A  +L+ +L+++E Q+  +  +    ++   G    +
Sbjct: 241 THLPTGLVVTSS-EKSQHRNREIAMQVLKTRLFDMERQRASDERSAARKAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+      ++L GDLD+ + A +A
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYRLEEILGGDLDETIDALIA 339


>gi|288925782|ref|ZP_06419713.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315608268|ref|ZP_07883258.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
 gi|288337437|gb|EFC75792.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315250049|gb|EFU30048.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
          Length = 370

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LDGLESRFEEVSTLITDPDVIADQQRYVKLTKEYKDLGDIMDVRKRYIACLNAIKESKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   + ++ ++E +   +L      D+ +  +E+ AGAGG E+ 
Sbjct: 71  LANESDADMKEMAREELATNEDLQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ + + +      + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKKYCDSKGWNLSVTSVSEGAVGGYKEIDFAVSGVDVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG V    ++C + R Q KNK +A + L   +++ E QK  ++IA+  +S 
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYIDDIASRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R           + GD+ D + A    +
Sbjct: 310 VSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFMGGDIQDMIDALTVAE 360


>gi|306835871|ref|ZP_07468866.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
 gi|304568236|gb|EFM43806.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
          Length = 358

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   I   +E+     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ D    QE +D L     E+E K  + L    E DS D  +E+ AGAGG E+  +A
Sbjct: 68  AYEDHD---FQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+A+K  FK E L +++ +  G+K  T+  +        A+   K E GVHR
Sbjct: 125 GDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +  
Sbjct: 245 VRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++R+Y   P   + D R   +  +   VL+GD+ D +KA    ++
Sbjct: 305 SERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQER 350


>gi|300727227|ref|ZP_07060643.1| peptide chain release factor 1 [Prevotella bryantii B14]
 gi|299775465|gb|EFI72059.1| peptide chain release factor 1 [Prevotella bryantii B14]
          Length = 370

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 96/352 (27%), Positives = 165/352 (46%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LEGLESRFEEVSTLITDPSVIADQPRFVKLTKEYKDLSDIMDARKRYIACLNSIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   + ++ ++E + +   +     D+ +  +E+ AGAGG E+ 
Sbjct: 71  LANESDPDMKEMAREELSENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ +KR +        +G   G K     I G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKKYCDKRGWTLSITSTSEGAVGGFKEIDCAISGDNVYGVLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG +    ++C + R Q KNK +A + L   +Y+ E QK  ++I++  +S 
Sbjct: 250 LRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYLDDISSRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R           L+GD+ D + A    +
Sbjct: 310 VSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLNGDIQDMIDALTVAE 360


>gi|227823188|ref|YP_002827160.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
 gi|227342189|gb|ACP26407.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
          Length = 352

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILL 73
              +R + +  +    P           L  E   L   ++ I+  +     L D  +LL
Sbjct: 3   ELERRFAEIEARMSAGPS----ADVYVKLASEYSELQPVVTKIRAYEKATAELADIEVLL 58

Query: 74  -ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + A +++   + +     ++     +E + Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 59  SDRATDKEMRDLAEMERPEVEERIEALEEEIQILLLPKDAADEKSAILEIRAGTGGSEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 119 LFAGDLFRMYERYAAAKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 179 RVPETEASGRIHTSAATVAVLPEA-EEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++L+++E   +   +      K+++G G  
Sbjct: 238 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLFDMER--QRADSERSADRKSQVGSGDR 294

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +++G++D+ + A LA
Sbjct: 295 SERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDEVVDALLA 337


>gi|254438684|ref|ZP_05052178.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
 gi|198254130|gb|EDY78444.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
          Length = 344

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 111/339 (32%), Positives = 170/339 (50%), Gaps = 14/339 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R  FL  +  +  L  +      + RE   L   +  ++  QD   +      +  
Sbjct: 2   QITERFEFLEARMGE-GLGGD--AFVSVSREYAELRPVVEVVRHYQDLTEEIEGAQAMLS 58

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +     L +++  +   +       +    AD   A LE+  G GG E+  +
Sbjct: 59  ---DPEMKELAEMELPQLRERLPDAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALF 115

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY R+AE R +  E LE    E  GIK  T  I G N +  +K E GVHR+ R+
Sbjct: 116 AGDLLRMYQRYAESRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRV 175

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRIT
Sbjct: 176 PETESGGRIHTSAATVAVLPEA-EDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRIT 234

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           H+P+G+VV    E+SQH+N+  A  +L+ +LY+ E QK  +E +    +         +I
Sbjct: 235 HMPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDAERQKVHDERSADRAAQVGSGDRSERI 293

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   + D R N+       +L GDLD+ +   +
Sbjct: 294 RTYNF-PQGRMTDHRINLTLYKLDAILQGDLDEVIDGLI 331


>gi|50954441|ref|YP_061729.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|61214606|sp|Q6AG71|RF1_LEIXX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50950923|gb|AAT88624.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 358

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 173/347 (49%), Gaps = 11/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD     +     L  +  DP L  + + +K + R    L   ++   E +    D   
Sbjct: 1   MFDSVTGLIAEHDDLQQQLSDPELHSDPVRSKKVNRRYAELSRIVAAYTEWKQLTDDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA   +D +   E     Q ++   E  +   +     DS DA +E+  G GG ES 
Sbjct: 61  ARELAA--EDDAFAAEIPGLEQGLEESEEKLRRLLIPRDPNDSRDAIMEIKMGEGGAESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQ 185
            +A  LL MY  +A+ R++K E +E    +  GIK   +  KG         +  LK E 
Sbjct: 119 LFAGDLLSMYLHYADSRRWKAEIIEQTSSDLGGIKDVQVAFKGSSSDPAEGVWAHLKYEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V+P VD+  E+EI+ +D +ID +R+SG GGQ VNT
Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEINPNDLKIDVFRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKT 304
           TDSAVRITH PTG+VV  Q E+SQ +N+  A  +LRA+L   + ++ +  A    +    
Sbjct: 239 TDSAVRITHAPTGIVVSMQNEKSQLQNREAAMRVLRARLLAKQQEEADAEAAEFRKGQIR 298

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +    +IR+Y   P   + D RT  +  +   V++G L   +++ +
Sbjct: 299 TMERSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGALGPVIESCI 344


>gi|83592089|ref|YP_425841.1| peptide chain release factor 1 [Rhodospirillum rubrum ATCC 11170]
 gi|119361593|sp|Q2RWE1|RF1_RHORT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83575003|gb|ABC21554.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 354

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 119/318 (37%), Positives = 169/318 (53%), Gaps = 11/318 (3%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            + RE   L   +  I  + D   +      L    DD  +     + + R++ E+   +
Sbjct: 33  RMSRELADLAPVVEAIGRLDDAKAELAGARALL---DDPDMRDLAREEVLRLEAEIPALE 89

Query: 104 F----ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  L   EAD     LEV AG GG E+  +A  LLRMY R+A++R ++ E +E  D
Sbjct: 90  HGVKLLLLPRDEADDRGVILEVRAGTGGDEAALFAGDLLRMYERYAQERGWRFEVMEASD 149

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            +  GIK A+  I G   +  LK E GVHR+ R+   +   R HTS +++ V P   + +
Sbjct: 150 TDIGGIKEASAAISGRGVFARLKFESGVHRVQRVPVTEGGGRIHTSAATVAVLPEA-EEV 208

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++EI E D RIDTYR+ GAGGQHVNTTDSAVRITH+P+GVV QCQ E+SQHKNKA+A  M
Sbjct: 209 DVEIEEKDLRIDTYRSQGAGGQHVNTTDSAVRITHLPSGVVAQCQDEKSQHKNKAKAMRM 268

Query: 280 LRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           LR KLY+   Q  ++        +   G    +IR+Y   P   V D R  +      +V
Sbjct: 269 LRTKLYDHARQTADDARAEARRVQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHRLPEV 327

Query: 339 LDG-DLDDFMKATLAIKK 355
           L G  LD+ ++  +A  +
Sbjct: 328 LAGTALDEVIEPLIAEDQ 345


>gi|325971906|ref|YP_004248097.1| peptide chain release factor 1 [Spirochaeta sp. Buddy]
 gi|324027144|gb|ADY13903.1| Peptide chain release factor 1 [Spirochaeta sp. Buddy]
          Length = 354

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 182/340 (53%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++L+ ++ K   P   Q++   K L +ER HL   I  ++ +       +   +L
Sbjct: 5   LPEYEKQLADIDEKLSRPETMQDMKLYKSLNQERSHLAPIIDQLQLMHSLQTQIIGAHQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +L+ T + L  ++ E+E  +       +     +  D  +E+ AG GG E+ 
Sbjct: 65  MKEETDQEMLEMTREELHELENELEVCEKKTKMLLIPPDPLEGKDIIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+ +A+++ +K E L  ++    G K   + I G + YG L+ E GVHR+ 
Sbjct: 125 LFAANLFRMYSHYADEKGWKMEILSSNETGIGGYKELVISISGKDVYGSLRWESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  +++ +IEI + D +ID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSAVTVAVLPEAEET-DIEIRQEDLKIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           +TH+PTG+VV CQ E+SQ KN+A+A  +LR++L++LE  K+         S+   G    
Sbjct: 244 LTHLPTGLVVICQDEKSQIKNRAKALRVLRSRLFDLEEDKKNRERAEARKSQVGSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+       +++G LD+ ++  
Sbjct: 304 RIRTYNF-PQNRLTDHRINLTLYKLELIMEGQLDEVVEGL 342


>gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199508|gb|EGD56689.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 364

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 175/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+ + +    L   ++   ++     D       
Sbjct: 16  IDDILAEHAGLQAQLSDPALHDDPANARRVGKRFAELAPVMTTYTKLTAARDDLEAAR-- 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
               +  +   E    L+    E++    + L      DS+D  LEV +GAGG ES  +A
Sbjct: 74  -ELAEADAAFAEEIPALEATVTELDATLTDLLAPRDPHDSDDVVLEVKSGAGGEESALFA 132

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
           + L+RMY ++ E+  +K   L   + +  G K ATL IK         +  LK E GVHR
Sbjct: 133 SDLVRMYLKYCERHGWKATVLGATESDLGGYKEATLSIKARETVRDGVWSRLKFEGGVHR 192

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  D+  EI+I ESD RID YR+SG GGQ VNTTDSA
Sbjct: 193 VQRVPVTESQGRIHTSAAGVLIYPEPDEVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSA 252

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PT +VV CQ ERSQ +NKA+A  +L A+L     ++ E  A+ G  ++   +  
Sbjct: 253 VRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLKAAAEEEAEAEASAGRQAQIRTVDR 312

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL G++D  + A +   K
Sbjct: 313 SERIRTYNF-PENRITDHRIGYKANNLDSVLGGEMDALLDALVEADK 358


>gi|154490399|ref|ZP_02030660.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
 gi|154089010|gb|EDN88054.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
          Length = 322

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 133/315 (42%), Positives = 192/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  +   E       +E  +        VE  +F 
Sbjct: 1   MKKVKELKKWIELYNEVHAAAEELQLAYDYVKEGIVSE--EEVDEAYGNAIQLVESLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+MLLRMYTRWAE   +K       +G+EAGI
Sbjct: 59  NMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++I +
Sbjct: 119 KTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKIDQ 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +      TG    ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R E     E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|283455530|ref|YP_003360094.1| peptide chain release factor 1 [Bifidobacterium dentium Bd1]
 gi|283102164|gb|ADB09270.1| prfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium dentium Bd1]
          Length = 340

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 159/333 (47%), Gaps = 16/333 (4%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P +  +  + + L R    L   +S     +    D     E+A E  D    +E  
Sbjct: 1   MAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASE--DPDFAEEAK 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                +    E  +   +     D+ D  +E+ AG GG E+  +A  LLRMY R+AEKR 
Sbjct: 59  RLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           +       +  E  G+K   L I+           +  LK E GVHR+ RI   +S  R 
Sbjct: 119 WAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRI 178

Query: 203 HTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAVR+THIPTG+VV
Sbjct: 179 QTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVV 238

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQ 318
             Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++       +IR+Y   
Sbjct: 239 SMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRSERIRTYNF- 295

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           P   + D RTN +  +   VLDGDL   + + +
Sbjct: 296 PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 328


>gi|87124992|ref|ZP_01080839.1| peptide chain release factor [Synechococcus sp. RS9917]
 gi|86167312|gb|EAQ68572.1| peptide chain release factor [Synechococcus sp. RS9917]
          Length = 365

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 103/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +     +Q    +      L
Sbjct: 10  LEAASTSFRNLERQLADPDVAADPKRLETIARERSRLEPLVQDFASLQQVESERDQAKAL 69

Query: 76  ALEE-DDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +D ++ +     L +++      +E      L +   D     LE+ AGAGG E+
Sbjct: 70  LRESREDPAMQELAQQELDQLEVRRSALLEQLTLALLPTDPRDGRSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+  ++ +  + +  +  +  G +   L +KG   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGTRQHWTVQPVSANAADLGGYRELILSVKGEAVFSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  ++  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVQIDPTELEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE +L   E  A    + + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQL--AEANARESSARRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R          VL+G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLG-RNFGLDPVLEGQLDEVIGACIAEEQ 352


>gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594]
 gi|122543160|sp|Q2N5U6|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594]
          Length = 355

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + L  +     L     E     R+   L+       E++    +   L E+
Sbjct: 8   LDQIANRFAELEARMASGTL--EGEEFVQASRDYAELEPVAKVAAEVKAMREEIGGLEEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ QE    ++    E E       L    AD+  A LE+ AG GG E+  +A
Sbjct: 66  LADPEMKAMAQEELAAIREALPEKERQLAIAMLPKDSADNKPAMLEIRAGTGGDEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A ++ +K E + ++  E  G K     + G   +  LK E GVHR+ R+ 
Sbjct: 126 GDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVANVSGTGVFAKLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D ++++I + D +ID YRASGAGGQHVNTTDSAVRITH
Sbjct: 186 ETESGGRIHTSAATVAVLPEP-DEVDVQIDDKDLKIDIYRASGAGGQHVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+VVQ Q ERSQHKNKA+A  +LR +LY+ L  Q + E A   ++         +IR
Sbjct: 245 LPTGIVVQQQDERSQHKNKAKAMQVLRTRLYDHLREQSQGEEAAARKAMVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
           +Y   P   V D R  +      +++ G  L + + A +A
Sbjct: 305 TYNF-PQGRVTDHRIGLTLHKLDEIIAGPGLGELVGALIA 343


>gi|33866628|ref|NP_898187.1| peptide chain release factor 1 [Synechococcus sp. WH 8102]
 gi|46576726|sp|Q7U4H2|RF1_SYNPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33633406|emb|CAE08611.1| peptide chain release factor RF-1 [Synechococcus sp. WH 8102]
          Length = 365

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 173/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   +E+Q    +     EL
Sbjct: 10  LEAATASFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLEGEQKQSREL 69

Query: 76  ALE-EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D ++ +   D+L  +        E      L     D     LE+ AGAGG E+
Sbjct: 70  LKECRGDAAMEELAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++K  +  + +  ++ +  G +   L +KG + +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKL  LE ++RE  A      + ++G G 
Sbjct: 249 DLLHKPSGIRVFCTQERSQLQNRERALEILRAKL--LEQEQREAAARESSDRRAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   VLDG L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLG-RNFSLDPVLDGQLEDLIGACIAEEQ 352


>gi|157825817|ref|YP_001493537.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
 gi|166223595|sp|A8GNQ4|RF1_RICAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157799775|gb|ABV75029.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
          Length = 355

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 125/344 (36%), Positives = 182/344 (52%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L++ +  IKE      +       
Sbjct: 7   LAKILDKYDNLGKKLSS-GIMGD--EFVKASKEYAELEDVVVKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L    D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLELGFDNATLAMIEDEIHILENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E   K +E A+            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRNKEQERADSRRGQIGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIA 345


>gi|148377997|ref|YP_001256873.1| peptide chain release factor 1 [Mycoplasma agalactiae PG2]
 gi|238686692|sp|A5IZH6|RF1_MYCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148292043|emb|CAL59435.1| Peptide chain release factor 1 [Mycoplasma agalactiae PG2]
          Length = 358

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 170/343 (49%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                Q    L  K +DP +  N+ E   + +E   +          ++ L D      +
Sbjct: 9   LSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILKDVEQAKIM 68

Query: 76  A--LEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                E++    +   D    ++    E  +   L   E D  +  +E+   AGG E+  
Sbjct: 69  LESKNEEEVEFAKMIIDENSLKLDELEEKLKILILPQDENDDKNIIVEIRGAAGGDEANI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++A++  F+ + L  +     G       IKG  AY   K E GVHR+ R
Sbjct: 129 FAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P +DDS+EIEI  SD +ID +R+SGAGGQ VNTTDSAVRI
Sbjct: 189 VPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+QK+ E  +             +I
Sbjct: 249 THLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHGDRSEKI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R +   +    +++G L   + A LA ++
Sbjct: 309 RTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQ 349


>gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi]
 gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi]
          Length = 357

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 188/345 (54%), Gaps = 11/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++ + +    E+P       E   L +E   L   I  I E      +   L E+
Sbjct: 5   LQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEEI 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEV------EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +E+    ++E +      K +V         +   L   E DS +A LE+ AG GG E
Sbjct: 64  MKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E GVHR
Sbjct: 124 AALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S+ R HTS +++ + P V + ++ +I E D RID YR+SG GGQ VNTTDSA
Sbjct: 184 VQRVPETESSGRLHTSAATVAILPEV-EEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           VR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E   +    S+   G  
Sbjct: 243 VRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTMRKSQIGSGDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ +G+LD+F++A ++
Sbjct: 303 SERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 346


>gi|46199879|ref|YP_005546.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55981909|ref|YP_145206.1| peptide chain release factor 1 [Thermus thermophilus HB8]
 gi|2500140|sp|P96077|RF1_THET8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81567592|sp|Q72HB8|RF1_THET2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88192257|pdb|2B64|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|209156517|pdb|3D5A|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156573|pdb|3D5C|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|300508626|pdb|3MR8|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508681|pdb|3MS0|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s).
 gi|1785848|dbj|BAA13349.1| peptide chain release factor 1 [Thermus thermophilus]
 gi|46197506|gb|AAS81919.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55773322|dbj|BAD71763.1| peptide chain release factor 1 (RF-1) [Thermus thermophilus HB8]
          Length = 354

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 8/329 (2%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
            DP + ++    + L R    +   I  I+E +  L D      L  + +   + +   +
Sbjct: 20  SDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAERE 79

Query: 91  NLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            L   K  +E   +   L     D  DA +E+ AG GG E+  +A  L  MY R+AE+  
Sbjct: 80  ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ H  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEVLDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++  +  ++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEEE-DFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G    +IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R          VL G L   ++A     +
Sbjct: 316 RIGFTTHDLEGVLSGHLTPILEALKRADQ 344


>gi|227501694|ref|ZP_03931743.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
 gi|227077719|gb|EEI15682.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
          Length = 352

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   I   +E+     D     E+
Sbjct: 2   VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E+ D    QE +D L     E+E K  + L    E DS D  +E+ AGAGG E+  +A
Sbjct: 62  AYEDHD---FQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFA 118

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
             L RMY R+A+K  FK E L +++ +  G+K  T+  +        A+   K E GVHR
Sbjct: 119 GDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGVHR 178

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSA
Sbjct: 179 VQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSA 238

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           VRITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A     S    +  
Sbjct: 239 VRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDR 298

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++R+Y   P   + D R   +  +   VL+GD+ D +KA    ++
Sbjct: 299 SERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQER 344


>gi|298711208|emb|CBJ32429.1| peptide chain release factor 1 [Ectocarpus siliculosus]
          Length = 448

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 170/352 (48%), Gaps = 17/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +  + L  +  DP +  N      + +ER  ++  ++   E      D     E+
Sbjct: 80  LSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEM 139

Query: 76  ALEE----DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E      D  + +   + ++ ++  +E  +       L +   D  +  LE+ AG GG
Sbjct: 140 FTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDDRNVMLEIRAGTGG 199

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  WA  LL +Y ++A ++ +  + +E    E  G ++    + G   Y  LK E GV
Sbjct: 200 DEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGV 259

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ + P V D + + I   D  I T R+ G+GGQ+VN  +
Sbjct: 260 HRVQRVPATETQGRVHTSTATVAIMPEV-DEVAVNIRPEDIEIKTARSGGSGGQNVNKVE 318

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAV + H PTG+ + C QERSQ KN+  A  +LR+++Y++EL+K++  A    + K ++G
Sbjct: 319 SAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQ--AETSGNRKAQVG 376

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
            G    +IR+Y  +      D R   +    ++ L G  LDD + A + + +
Sbjct: 377 SGSRSEKIRTYNWKDS-RCSDHRIG-KNFPLNNFLSGSGLDDMIGACILLDQ 426


>gi|297622890|ref|YP_003704324.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
 gi|297164070|gb|ADI13781.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
          Length = 373

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +    L     DP L  +    +  M     L   +   +E +D +       E 
Sbjct: 5   LENLRREFDELEASLGDPELIADQARYREAMGRYSELQTIVRTYREYKDLVDGLQNAREA 64

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+ +++      +   L     D  +  +E+ A AGG E+  +A
Sbjct: 65  LADPELAEMAREEIAALEPQLEALERRLERLLLPKDPFDDKNVIVEIRAAAGGDEASLFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             +  MY R+AE + FKTE L+ H     G    +  I G  AY   K E GVHR+ R+ 
Sbjct: 125 AEVFEMYRRYAEAQGFKTEVLDSHPSSVGGFSKVSFEILGRGAYSKFKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P   + +++++S +D R+D +R+SG GGQ VNTTDSAVRIT+
Sbjct: 185 ATETQGRIHTSTVTVAVLPEA-EDVDVQLSPADYRVDVFRSSGPGGQSVNTTDSAVRITY 243

Query: 255 IP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
            P     +VV CQ  +SQ KNK +A  +LRA+L E E ++    A      +   G    
Sbjct: 244 KPGTSDEIVVTCQDGKSQIKNKEKALAVLRARLLERERERAAAEAREARLVQIGSGERSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R      + SDVL G LD+  +A  + ++
Sbjct: 304 KIRTYNF-PQSRITDHRIGYTTHNLSDVLLGKLDELTEALSSAEQ 347


>gi|222100137|ref|YP_002534705.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572527|gb|ACM23339.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 218

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 120/210 (57%), Positives = 155/210 (73%)

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+LK E GVHRLVRISP+D+  R
Sbjct: 1   MRWAERKGFDVEIVEYQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARR 60

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ V P ++D + IEI   D +I+T+RASG GGQHVN T+SAVRITHIPTG+VV
Sbjct: 61  RHTSFASVNVIPEIEDDVHIEIKPEDLKIETFRASGHGGQHVNKTESAVRITHIPTGIVV 120

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQH+NK  A  +L+A+LY+LEL+K+ +     +    +I WG QIRSYV  PY 
Sbjct: 121 TCQNERSQHQNKQTALKILKARLYQLELEKKRKEIQEIQGELKDISWGNQIRSYVFHPYT 180

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +VKD RT +E ++   V+DGD+D F++A L
Sbjct: 181 LVKDHRTGVETSNVDAVMDGDIDIFIEAEL 210


>gi|126462320|ref|YP_001043434.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17029]
 gi|166223593|sp|A3PJZ6|RF1_RHOS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126103984|gb|ABN76662.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 351

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 177/345 (51%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+R  FL  +           E   L RE   L   ++ I   +  L D      +
Sbjct: 7   LLQIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEISAYRTALEDLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D +  ++  +    +  +   L    AD+  A LE+  G GG E+ 
Sbjct: 64  LS---DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ E L++   E  GI+ AT  ++G  A+  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 181 RVPETEAQGRIHTSAATVAVLPEA-EEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +  +   ++         
Sbjct: 240 ITHLPTGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDRSE 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 299 RIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|291297042|ref|YP_003508440.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
 gi|290472001|gb|ADD29420.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
          Length = 358

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 168/344 (48%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++       L  +  DP +  N  E + + +    + + +  I+  ++ L       EL
Sbjct: 5   LESLEAEYQALERQLADPAVLANQSEYQRISKRYAEMGHLVETIRSYKEALTHLAEAREL 64

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +     L+ RI+      +   L     D  +A +E+ AG GG E+  +A
Sbjct: 65  QFDPELGEMARADIAALEPRIRELEAELELLLLPKDPLDEKNAIVEIRAGTGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  M   +A++  ++ E L+    +  G+      + GP AYG+LK E GVHR+ R+ 
Sbjct: 125 AELRDMIMEYAKQGGYRVEVLDTSLTDLGGVSKVVFEVSGPGAYGYLKYEAGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + ++++I  +D  I   RASG GGQ VNTTDSAV++ H
Sbjct: 185 ATETQGRIHTSTATVAVMPEA-EEVDVQIDPADLEITVSRASGPGGQGVNTTDSAVQVLH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311
            PTG++V C + RSQ KNK +A ++LR++L  LE+++ EE A   E    +IG      +
Sbjct: 244 KPTGMIVSCMESRSQIKNKEKALSILRSRL--LEMKRAEEAARRREDRLAQIGAGERSEK 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R          VL GDL    +A     +
Sbjct: 302 IRTYNF-PQSRVTDHRIGFTTHDLEGVLAGDLSKLHEALRKADQ 344


>gi|254451602|ref|ZP_05065039.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
 gi|198266008|gb|EDY90278.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
          Length = 344

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 112/339 (33%), Positives = 170/339 (50%), Gaps = 14/339 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R  FL  +  +  L         + RE   L   +  ++  QD   +      +  
Sbjct: 2   QITERFEFLEAQMGE-GLGG--EAFVAVSREYAELRPVVEVVRTYQDLTAEIEGAEAMLS 58

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +     L +++ ++   +       +    AD   A LE+  G GG E+  +
Sbjct: 59  ---DPEMKELAEMELPQLRQQLPAAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALF 115

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY R+AE R +  E LE    E  GIK  T  I G N +  +K E GVHR+ R+
Sbjct: 116 AADLLRMYQRYAENRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRV 175

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRIT
Sbjct: 176 PETESGGRIHTSAATVAVLPEA-EDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRIT 234

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           H+P+G+VV    E+SQH+N+  A  +L+ +LY+ E QK  +E +    +         +I
Sbjct: 235 HMPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDAERQKVHDERSADRAAQVGSGDRSERI 293

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R+Y   P   + D R N+       VL GDLD+ +   +
Sbjct: 294 RTYNF-PQGRMTDHRINLTLYKLDAVLQGDLDEVIDGLI 331


>gi|309812101|ref|ZP_07705859.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
 gi|308433788|gb|EFP57662.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
          Length = 362

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 174/350 (49%), Gaps = 15/350 (4%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D     V     L  +  +P    +    + L +    L   ++     +    D   
Sbjct: 1   MLDSAATIVAEYDDLEKQLAEPATHADPTLMRRLNKRYAALAPTVAAYHAWKRAQDDLGA 60

Query: 72  LLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ELA E    +        LQ  +    +  +   L   E D  D  LEV AG GG ES
Sbjct: 61  AEELADE---DAAFAAELPALQTHLDASADKLRTLLLPRDEDDERDVVLEVKAGEGGAES 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKG 183
             +A  L+RMY R+AE+R +K E  +  D +  G K A + ++       G   +  LK 
Sbjct: 118 ALFAGDLVRMYLRYAERRGWKAEIADATDADLGGYKDARITVRAKGLPEPGEAPWARLKY 177

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQH 242
           E GVHR+ R+   +S  R HTS + + V P +D+  +      +D +ID YR+SG GGQ 
Sbjct: 178 EGGVHRVQRVPVTESQGRIHTSAAGVLVMPDLDEDDDEIEFGPNDLKIDVYRSSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTGVVV CQ E+SQ +NK  A  +L+A+L ++E++++E  A+    S
Sbjct: 238 VNTTDSAVRITHLPTGVVVSCQNEKSQLQNKESALRVLKARLRQMEIERKEAEASAARKS 297

Query: 303 K-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +   +    +IR+Y   P   + D RT  +  +   VLDGDLD  +++ L
Sbjct: 298 QVRTVDRSERIRTYNF-PENRIADHRTGYKSYNLDAVLDGDLDAVVQSAL 346


>gi|260911915|ref|ZP_05918480.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633938|gb|EEX52063.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 370

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 156/348 (44%), Gaps = 15/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L RE + L + ++  K     L       ++
Sbjct: 11  LDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVACLNSIAEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +     + L   + E     E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 71  LANETDAEMKDMAREELSTNEAERPKLEEEIKLLLVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ + + +        +G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFGMYKRYCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK  ++IAN  +S 
Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIANRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +      +IR+Y   P   V D R           + GD+   + A 
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDIQAMIDAL 356


>gi|332558342|ref|ZP_08412664.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
 gi|332276054|gb|EGJ21369.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
          Length = 351

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 177/345 (51%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+R  FL  +           E   L RE   L   ++ I   +  L D      +
Sbjct: 7   LLQIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEISAYRTALEDLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D +  ++  +    +  +   L    AD+  A LE+  G GG E+ 
Sbjct: 64  LS---DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ E L++   E  GI+ AT  I+G  A+  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 181 RVPETEAQGRIHTSAATVAVLPEA-EEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +  +   ++         
Sbjct: 240 ITHLPTGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDRSE 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 299 RIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|218672481|ref|ZP_03522150.1| peptide chain release factor 1 [Rhizobium etli GR56]
          Length = 352

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFDEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLDTLL 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  +K  +E  + E     L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDKSVDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAAEKSWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|329116672|ref|ZP_08245389.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
 gi|326907077|gb|EGE53991.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
          Length = 359

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       +   ++ +D +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAGTRETVDVYRKYKDVIQAIADAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  I +   + L+  K   E  +       L     D  +  LE+   AGG E+
Sbjct: 67  IKDSGGDSDIEEMAREELKESKAAKETYEEQLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKFAESQNWRFEVMEATYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P V + ++ +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMPEV-EEVDYQIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           R+ HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RMVHIPTNIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIVDALVLYDQ 350


>gi|163793919|ref|ZP_02187893.1| Protein chain release factor A [alpha proteobacterium BAL199]
 gi|159181030|gb|EDP65547.1| Protein chain release factor A [alpha proteobacterium BAL199]
          Length = 356

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 181/344 (52%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R   L  +   P        + + L +E   L   +  +  ++    +      
Sbjct: 7   LDRVLTRALELEARLASPDGFV--QSDFQRLSKELAELTPVVETVGLLRRTRAELADAQA 64

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
           LA EE D  + +   +    I+ ++   +       L   EAD+ +A LEV AG GG E+
Sbjct: 65  LA-EESDGEMRELAEEEAAAIEAKLPDLERAMMLHLLPRDEADARNAILEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+A+ R ++ E +E+ + E  G K A   I G + +  LK E GVHR+
Sbjct: 124 ALFAADLFAMYQRYAQGRGWRFEVMEVSENEIGGYKEAIATISGQSVFAHLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +++ I + D RID YR+SGAGGQHVNTTDSAV
Sbjct: 184 QRVPATESQGRIHTSAATVAVLPEA-EEVDVAIDDKDLRIDVYRSSGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITH+PTGVVV  Q E+SQHKN+A+A  +LRA+L++ E  +R+ E A   +S        
Sbjct: 243 RITHLPTGVVVTQQDEKSQHKNRAKAMKILRARLFDQERTRRDSERAADRKSQIGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            +IR+Y   P   V D R N+       V+ G+ LD+ + A +A
Sbjct: 303 ERIRTYNF-PQGRVTDHRINLTLYKIDKVMSGEALDEIVDALIA 345


>gi|254419936|ref|ZP_05033660.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
 gi|196186113|gb|EDX81089.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
          Length = 355

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 174/345 (50%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        + +E   L +E   L      ++ +     +   L  +
Sbjct: 8   LDQVLDRFHEVEARMGAAT---DGVEIVRLSKEHAELKPVADAVQGLARLRAEMADLEVM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSN---DAYLEVHAGAGGTESQ 131
           A    D  +     D L+ +   +   + +  LL    D++    A LEV AG GG E+ 
Sbjct: 65  AA---DPEMAAMAQDELRDLTERLPQMERDVALLLAPRDADENASAVLEVRAGTGGDEAA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+A  R ++ E     +G+  G K     + G   +G LK E GVHR+ 
Sbjct: 122 LFAGDLFRMYSRYAATRGWRIELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P V + +EIEI E D RIDT+RASG+GGQHVN TDSAVR
Sbjct: 182 RVPTTEAGGRIHTSAATVAVLPEV-EDVEIEILEKDIRIDTFRASGSGGQHVNKTDSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           ITH+PTG+V     E+SQH N+ +A   LR +LY+++ Q ++   A+  +S         
Sbjct: 241 ITHLPTGIVATSS-EKSQHVNRDKAMKNLRVRLYDMQRQAKDLARADSRKSQVGSGDRSE 299

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +   S   +L+GDLD  + A +A  +
Sbjct: 300 RIRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQ 343


>gi|32491189|ref|NP_871443.1| hypothetical protein WGLp440 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166396|dbj|BAC24586.1| prfB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 278

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 139/274 (50%), Positives = 191/274 (69%), Gaps = 1/274 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++LEE+D   L E ++ +  +   ++  +       + D  + Y+++  G+GG ++QDWA
Sbjct: 1   MSLEENDSKSLLEVNNEIILLNKRMKKIELMCYFFEKNDRCNCYMDIQPGSGGIDAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++LLRMY +WA++  FKT+ +     E AGIKSAT+   G  AYGWLK E G+HRLVR S
Sbjct: 61  SILLRMYLKWADRNNFKTDIIYKSSSEIAGIKSATVKFLGSYAYGWLKKETGIHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN +RHTSF SI+VYP ++D IEI+I+ SD RID YR+SGAGGQHVN T+SAVRITH
Sbjct: 121 PFDSNGKRHTSFCSIFVYPDINDKIEIKINLSDLRIDVYRSSGAGGQHVNRTESAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT +  QCQ +RSQHKNK +A N L++KLYE EL+K+ +   I E SK++I WG QIRS
Sbjct: 181 LPTKITTQCQSDRSQHKNKEKAINQLKSKLYEFELRKKNKDKKIIEKSKSKIAWGNQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           Y+     +VKDLRT IE      +LDGDL+ F+ 
Sbjct: 241 YIF-DNSIVKDLRTGIESKKIQSILDGDLNIFLN 273


>gi|319406093|emb|CBI79723.1| peptide chain release factor 1 [Bartonella sp. AR 15-3]
          Length = 359

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 177/342 (51%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++  + P    N      L  E   L   I  I+ +     +   +  + 
Sbjct: 11  QLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIVSIRALNSLCKEITDIETII 66

Query: 77  LE-EDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + + D  +     + L    Q+I+   +  Q   L    AD     +E+ AG GG+E+ 
Sbjct: 67  SDTQTDTEMRNLAQEELSSLYQKIQELEQELQILLLPKDIADEKSVIIEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLPEA-EEIDIEICPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E   +    ++   G    
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAESERSASRKTQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+       +++GDL++ + A ++
Sbjct: 305 RIRTYNF-PQGRVTDHRINMTLYKLDRIMEGDLNELINALIS 345


>gi|307296979|ref|ZP_07576795.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
 gi|306877505|gb|EFN08733.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
          Length = 363

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 179/346 (51%), Gaps = 13/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +        L     E   L +E   ++       E++    +   L  +
Sbjct: 8   IAQIEARRDEVQASMTRADLA--PEEFVRLSKEYAEIEPVARAAHEVRRLRQELSALEYM 65

Query: 76  ALEED---DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
           A  ED   D  + +   + +Q IK  +   +     + L    AD+  A LE+ AG GG 
Sbjct: 66  AGGEDADADPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+A+ + +K E +  +  E  G K     + G   +  LK E GVH
Sbjct: 126 EAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGVGVFAKLKFESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++++I++SD +ID YRASGAGGQHVNTTDS
Sbjct: 186 RVQRVPVTESGGRIHTSAATVAVLPEP-EEVDVQIADSDLKIDIYRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIG 307
           AVRITH+P+G+VV  Q ERSQHKNKA+A  +LRA++YE+E ++ + E A   ++      
Sbjct: 245 AVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVERERAQSEQAGARKAMVGSGD 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
              +IR+Y   P   V D R N+      ++L+G  L + + A +A
Sbjct: 305 RSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVA 349


>gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
 gi|238690952|sp|B2HQL3|RF1_MYCMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183177395|gb|ACC42505.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
          Length = 357

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 111/334 (33%), Positives = 160/334 (47%), Gaps = 13/334 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L     EA+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHADLERALADPELHSRPDEARKAGRRFARLAPIVATYRKLVAAREDLETAHEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           A                   ++     Q   +L      D++D  LEV +G GG ES  +
Sbjct: 68  AA----TDESFAAEAAELEARVAELDSQLTDMLAPRDPHDADDIVLEVKSGEGGEESALF 123

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVH 188
           A  L RMY R+AE+  +    L     +  G K ATL I          +  +K E GVH
Sbjct: 124 AADLARMYIRYAERHGWTVTVLGETTSDLGGYKDATLAIASKGDTADGVWSRMKFEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   + 
Sbjct: 244 AVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEEQAMADASADRASQIRTVD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              +IR+Y   P   + D R   +  +   VLDG
Sbjct: 304 RSERIRTYNF-PENRITDHRIGYKSHNLDQVLDG 336


>gi|225437801|ref|XP_002274067.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 181/345 (52%), Gaps = 14/345 (4%)

Query: 19  AVQRLSFLNTKTED-PHLWQNVI----EAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             QRLS +  ++               E     +E + L ++I  I E++++  +   L 
Sbjct: 28  MEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSSIEHITELRNKQKEIDGLK 87

Query: 74  ELALE-EDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L  E  +D  +L   ++ L    +  K          L   EAD  D  LEV AG GG 
Sbjct: 88  SLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEADERDCILEVRAGTGGE 147

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  + +MY ++++K  +K E ++I + +  G K A+  I G   YG LK E G+H
Sbjct: 148 EASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLKFESGIH 207

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+S
Sbjct: 208 RVQRVPVTEKSGRVHTSAVSVAILPQA-DEVDVQLRNEDLRIDTYRSGGSGGQHANTTNS 266

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIG 307
           AVRITHIP+G+ V  Q ERSQH NKA+A  +L AKLYE+E  + +++ + +         
Sbjct: 267 AVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRMEQIGSGD 326

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
              +IR+Y   P   V D R  I   S +DV+ G+ LD F+ A L
Sbjct: 327 RSERIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENLDVFIDALL 370


>gi|284992528|ref|YP_003411082.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
 gi|284065773|gb|ADB76711.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
          Length = 363

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 165/339 (48%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L T+  DP +  +   A+ L R    L   +   + +     D     EL
Sbjct: 16  LSGLLAEHAALETELADPAVHADASRARRLGRRYAQLAPLVETKRALDAVRDDLAAAREL 75

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  ++D S   E +   QR+    E  +   +     D  D  LE+ AG GG ES  +A 
Sbjct: 76  A--DEDASFAAEAAALEQRVPELEERLRSLLVPEDPDDDKDVILEIKAGEGGAESALFAG 133

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+R + TE L+    +  G K   + +K       +  LK E GVHR+ R
Sbjct: 134 DLLRMYLRYAERRGWATEVLDAVPADLGGYKDVAIAVKSRSDEGIWSRLKFEGGVHRVQR 193

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS   + V P   + +++ +  +D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 194 VPVTESQGRIHTSAVGVLVLPEA-EEVDVTVDPNDLRIDVFRSSGPGGQSVNTTDSAVRI 252

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQ 311
           TH+PTG+VV  Q E+SQ +N+  A  +LR++L      +     ++   S    +    +
Sbjct: 253 THLPTGIVVSSQNEKSQLQNRESALRVLRSRLLAAARDEAAAAASDQRRSQVRTVDRSER 312

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +R+Y   P   + D R   +  +   VLDG+LD  + A 
Sbjct: 313 VRTYNF-PESRISDHRVGFKAHNLDQVLDGELDPVIDAL 350


>gi|33864028|ref|NP_895588.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9313]
 gi|81576937|sp|Q7V518|RF1_PROMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33635612|emb|CAE21936.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9313]
          Length = 365

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   + +Q    +     +L
Sbjct: 10  LETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D ++     + LQ+++      V       L S   D     LE+ AGAGG E+
Sbjct: 70  LRESRGDDAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ ++  +  + L   + +  G +   L IKG   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E++I  S+  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL  LE Q  E  A    + + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKL--LERQIAEANARESSTRRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   VL G L++ + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLG-RNFSLEPVLTGQLEELIGACIAEEQ 352


>gi|162457313|ref|YP_001619680.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
 gi|229470353|sp|A9G9L1|RF1_SORC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161167895|emb|CAN99200.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
          Length = 364

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 172/344 (50%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L      P +     E + L RER  ++  +     ++D         E 
Sbjct: 7   LEAVQRRFQELEHLMCSPAVLAAPAELQRLNRERTEIEPVVVAFARMRDVERRIAEDREA 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + Q     L+  +  +  +    L      D+ +  +E+ +G GG E+  +A
Sbjct: 67  LSDPDLSELAQAELPELELERERLAAELEVLLLPKDPNDTRNTVIEIRSGEGGEEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RM  R+AE +++K E L + +    G K    LI G + Y  L+ E GVHR+ R+ 
Sbjct: 127 ADLFRMLCRYAETKRWKVEVLNLSEASAGGYKEVAALITGQDVYSHLRYEGGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   D +++ I E D  I    + G GGQ VNTT+SAV+I H
Sbjct: 187 STETQGRIHTSTATVAVLPEA-DEVDVHIDEKDLEISIAASGGPGGQGVNTTNSAVQIKH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +PTG++V+CQ ERSQ KNKA+A  +LR++L ELE +++EE  +     +T +G G    +
Sbjct: 246 LPTGMIVKCQDERSQLKNKAKAMKVLRSRLLELEQRRQEEAQSA--ERRTMVGTGERAQK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +R+Y   P   V D R  +       +++GDL++ + A    ++
Sbjct: 304 VRTYNF-PQNRVTDHRIGLTLHKLDKIIEGDLEELIGALRTHRQ 346


>gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|81652805|sp|Q73IC2|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 359

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 188/345 (54%), Gaps = 11/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++ + +    E+P       E   L +E   L   I  I E      +   L E+
Sbjct: 7   LQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEEI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV------EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +E+    ++E +      K +V         +   L   E DS +A LE+ AG GG E
Sbjct: 66  MKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E GVHR
Sbjct: 126 AALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S+ R HTS +++ + P V + ++ +I E D RID YR+SG GGQ VNTTDSA
Sbjct: 186 VQRVPETESSGRLHTSAATVAILPEV-EEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           VR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E   +    S+   G  
Sbjct: 245 VRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTMRKSQIGSGDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ +G+LD+F++A ++
Sbjct: 305 SERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 348


>gi|154252199|ref|YP_001413023.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
 gi|171769599|sp|A7HTY3|RF1_PARL1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154156149|gb|ABS63366.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
          Length = 355

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNV--IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             + + R   + ++        +V       L +E   L+   + I  +  R  +     
Sbjct: 7   LQSVIARFEAVQSEMN-----SDVPRDRFVALSKEFSELEPVAAAIGHLLARRREYADAE 61

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L    D   + +E    L      +E++ Q   L    AD  +  LEV AG GG E+  
Sbjct: 62  QLLRVRDMAEMAKEEIARLNEELPRLEHEVQLMLLPKDAADDRNVILEVRAGTGGDEAAL 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+A  + +K E +   +GE  G K     I GP  Y  LK E GVHR+ R
Sbjct: 122 FAGDLFRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRVQR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS +++ V P   + +++EI + D RID YRASGAGGQHVN T+SAVRI
Sbjct: 182 VPVTEGGGRIHTSAATVAVLPEA-EEVDVEIEDKDLRIDVYRASGAGGQHVNKTESAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+VV  Q E+SQHKNKA+A  +LRA++++ E ++ +   +     +   G    +
Sbjct: 241 THLPTGIVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSAARKGQVGSGDRSER 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+       VL+G+ L + + A +A  +
Sbjct: 301 IRTYNF-PQSRVTDHRINLTLHKLDQVLEGEALGELIDALIAEDQ 344


>gi|195978153|ref|YP_002123397.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868513|ref|YP_002744461.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
 gi|238689817|sp|B4U317|RF1_STREM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585255|sp|C0MF07|RF1_STRS7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195974858|gb|ACG62384.1| peptide chain release factor 1 PrfA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225701789|emb|CAW99200.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 360

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  ++ +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSIDDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGE----ADSNDAYLEVHAGAGGTES 130
             E   D  I +   + L+  K   E  + +  L        D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDPDIEEMAKEELKEAKAAKETYEDKLKLLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQ 350


>gi|315453082|ref|YP_004073352.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
 gi|315132134|emb|CBY82762.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
          Length = 349

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               VQR   +      P +  ++ +   L +E+  L+      K     L        L
Sbjct: 6   LQAIVQRYDAIAHSLTQPEVLGDIKQLTELSKEQAGLEELAQVAKTYLQTLEGIQENKSL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
            LE+ +   L +    +   +     ++ + LL      D+ + YLE+ AG GG E+  +
Sbjct: 66  -LEDKELGELAKEELKVLEEEKLSLEERIKILLIPKDPNDNKNIYLELRAGTGGDEAGIF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+
Sbjct: 125 VGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQRV 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P V D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRIT
Sbjct: 185 PETESQGRIHTSAVTVAIMPEV-DDVEVNINPNDLRIEVFRAGGHGGQCVNTTDSAVRIT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+ V  Q E+SQHKN+ +A  +L+A+LYE +++++++  +     K ++G G    
Sbjct: 244 HIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQANSES--RKMQVGSGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +IR+Y   P   + D R N+   S  +++  G+LD  ++  +A
Sbjct: 302 RIRTYNY-PQNRLSDHRINLTLYSLEEIMLSGNLDPVIEPLIA 343


>gi|189218443|ref|YP_001939084.1| protein chain release factor A [Methylacidiphilum infernorum V4]
 gi|189185301|gb|ACD82486.1| Protein chain release factor A [Methylacidiphilum infernorum V4]
          Length = 377

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 177/342 (51%), Gaps = 14/342 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE- 74
            +   ++   L T+     L+ +  +   + +E   L   +    E++  + +    +E 
Sbjct: 7   IEKIQKKFDKLQTELSKEELYTDPSKTIEIAKEHTRLKETLDLYGELKQ-IENAKSSVES 65

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE---SLLSGEADS--NDAYLEVHAGAGGTE 129
           LA E  D  I +     + R+  +++        SL   E +    +  +E+ AG GG E
Sbjct: 66  LAKETVDPEIQELAQQEITRLSNKIQELTMAILGSLFPPEENKSSKNVIIEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY+++AEK+ +K E L  +  E  G+K     ++G  A+  +K E GVHR
Sbjct: 126 AALFAADLYRMYSKYAEKKGWKQELLHFNPSELGGLKEVIFTVQGKEAFRKMKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V     + +E++I   D RI+  RASG GGQ VNTTDSA
Sbjct: 186 VQRVPATESQGRIHTSTATVAVLLE-TEEVELDIKAEDLRIEVCRASGPGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V++ HIP+G++V+CQ ERSQ KNK +A  +L+A+L  L  ++ EE     +  K+ IG G
Sbjct: 245 VQVFHIPSGIMVRCQDERSQIKNKEKALKILKARL--LARKQEEEAQKRAQERKSMIGSG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
               +IR+Y   P   V D R  I   +    +DGD+D  + 
Sbjct: 303 ERTEKIRTYNF-PQGRVTDHRIPITLYNLQSFMDGDIDPIVD 343


>gi|254461785|ref|ZP_05075201.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2083]
 gi|206678374|gb|EDZ42861.1| peptide chain release factor 1 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 351

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 178/346 (51%), Gaps = 20/346 (5%)

Query: 18  NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
              QR  FL  K     DP    +      L RE   +   +  +   +  L D      
Sbjct: 9   QITQRFEFLEAKMAGGADPGEIAD------LAREYSDMKPVVEQVAAYRQLLSDIEDAEA 62

Query: 75  LALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +    DD  + +   + L  +K  +       Q   L   EAD+  A +E+  G GG E+
Sbjct: 63  ML---DDPEMKELAEEELPALKAAMPKAEAALQLALLPKDEADARPAMIEIRPGTGGDEA 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMY R++E R +K E +E    E  GIK  T  IKG N +  LK E GVHR+
Sbjct: 120 ALFAADLLRMYQRYSEARGWKFEIIEEQLTELGGIKEVTGHIKGENVFARLKYESGVHRV 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +++ I+ +D RIDT RASGAGGQHVNTTDSAV
Sbjct: 180 QRVPTTESGGRIHTSAATVAVLPEAQE-VDLVIAANDIRIDTMRASGAGGQHVNTTDSAV 238

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V    E+SQH+N+  A  +LR +LY+ E Q+ +E  +    S+   G   
Sbjct: 239 RITHIPTGIIV-VSAEKSQHRNREIAMQVLRTRLYDAERQRIDEERSADRKSQVGSGDRS 297

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       V++GDLD+ + A  A  +
Sbjct: 298 ERIRTYNF-PQGRMSDHRINLTLYKLDQVMEGDLDEIIDALTADDQ 342


>gi|67459154|ref|YP_246778.1| peptide chain release factor 1 [Rickettsia felis URRWXCal2]
 gi|75536414|sp|Q4ULG0|RF1_RICFE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67004687|gb|AAY61613.1| Peptide chain release factor RF-1 [Rickettsia felis URRWXCal2]
          Length = 355

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 184/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L++ ++ IKE      +       
Sbjct: 7   LAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++Y E   +K +E A+            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|37523990|ref|NP_927367.1| peptide chain release factor 1 [Gloeobacter violaceus PCC 7421]
 gi|46576716|sp|Q7ND15|RF1_GLOVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|35214996|dbj|BAC92362.1| translation releasing factor RF-1 [Gloeobacter violaceus PCC 7421]
          Length = 364

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 96/347 (27%), Positives = 181/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +  + L T+  DP L  N  E   ++R R  L+  +      Q    +   + ++
Sbjct: 11  LNDIERTYNDLTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQRLCAERNAVRQM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   +    ++  +   +       L     D  +  LE+ AG GG E+ 
Sbjct: 71  IRDEQDPELRELAEEEHTGLEERIARLEDEITLLLLPRDPNDDKNVMLEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY R+AE + +  +       E  G K   L I+G + Y  LK E GVHR+ 
Sbjct: 131 IFAGDLMRMYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSKLKFEAGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ + P V + +++EI+ +D  I T R+ GAGGQ+VN  ++AV 
Sbjct: 191 RVPVTETQGRVHTSTATVAIMPEV-EEVDVEINPNDIEITTTRSGGAGGQNVNKVETAVH 249

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H P+G+ + CQ+ERSQ +NKA+A  +LR KLY+++  +RE+   +    ++++G G  
Sbjct: 250 LVHKPSGIHIHCQEERSQLQNKARAMQILRVKLYDIK--QREQHEQVSGLRRSQVGTGDR 307

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D R + +  + +  ++G+++  +++ +A  +
Sbjct: 308 SEKIRTYNYKD-NRVTDHRLS-QNFTLNTAIEGEIETLIQSAIAAAQ 352


>gi|269957243|ref|YP_003327032.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305924|gb|ACZ31474.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 366

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 169/343 (49%), Gaps = 11/343 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + +     DP +  +   A+ L R    L+  +   +       D     EL   
Sbjct: 12  LLAEHAEIERALADPAVHADAGRARTLGRRYAELNQVVGAYRAWAAARDDAEAAAELLEL 71

Query: 79  ED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            D  +  +  E            E+ +   +     D  D  LE+ AG GG ES  +A  
Sbjct: 72  SDGLEEELAAELPGLQAAEADAAEHLRRVLVPRDPDDGRDVILEIKAGEGGEESALFAGD 131

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHR 189
           LLRMY R+AE++ + T+ LE  D +  G K   + IK       G   +  LK E GVHR
Sbjct: 132 LLRMYLRYAERKGWSTQVLEATDTDLGGYKDVQVAIKARSVNDPGDGVWAHLKYEGGVHR 191

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS + + V+P VDD  E+EI  +D RID YR+SG GGQ VNTTDSA
Sbjct: 192 VQRVPVTETQGRIHTSAAGVLVFPEVDDPGEVEIDPNDLRIDVYRSSGPGGQSVNTTDSA 251

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV  Q E+SQ +NK QA  +LRA+L   + ++    A     S+   +  
Sbjct: 252 VRITHLPTGIVVSMQNEKSQLQNKEQAMRVLRARLLAAQQEEAAAQAADLRRSQVRTVDR 311

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D RT  +  +   VL GDL+  +++ +
Sbjct: 312 SERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLEPVVRSAI 353


>gi|308235424|ref|ZP_07666161.1| peptide chain release factor 1 [Gardnerella vaginalis ATCC 14018]
 gi|311114831|ref|YP_003986052.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
 gi|310946325|gb|ADP39029.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
          Length = 365

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 16/344 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           A+     +  +  +P +  N    + L R    L + +S     +    D  +  E+A E
Sbjct: 15  ALNEYRDIENRMGEPEVASNPDAIRKLGRRHAELGSIVSAYLNYKQLCEDYEVANEMASE 74

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D  + +E     ++I    E  +   +     D+ D  +E+ AG GG E+  +A  LL
Sbjct: 75  DED--LAKEAKQLEEQIPAAKEKLRTALIPRDPDDARDMIMEIKAGTGGEEAALFAGDLL 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AEKR + T     +  E  G+K   L I+           +  +K E GVHR+ 
Sbjct: 133 RMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQ 192

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAV 250
           RI   +S  R  TS + + V+P  D+  +       D +ID + +SG GGQ VNTT SAV
Sbjct: 193 RIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAV 252

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++    
Sbjct: 253 RMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLD 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RTN +  +   VL+GDL   + + +
Sbjct: 311 RSERIRTYNF-PENRIVDHRTNYKAYNLDQVLNGDLQPVIDSDI 353


>gi|87198313|ref|YP_495570.1| peptide chain release factor 1 [Novosphingobium aromaticivorans DSM
           12444]
 gi|119361571|sp|Q2GBN7|RF1_NOVAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|87133994|gb|ABD24736.1| bacterial peptide chain release factor 1 (bRF-1) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 354

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 111/351 (31%), Positives = 174/351 (49%), Gaps = 24/351 (6%)

Query: 16  WDNAVQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
                 R + L  +                      R+   L+      +E+++   + +
Sbjct: 8   LAQIAARFAELEARLASGTLEGADFI-------AASRDYAELEPVARVAEEVREMRGELV 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAG 126
            L  L    DD  + +   + L RI+ E+   +       L    AD+  A LE+ AG G
Sbjct: 61  SLAAL----DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGTG 116

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY R+A ++ ++ E + ++  +  G K     + G   +  LK E G
Sbjct: 117 GDEAALFAADLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQGVFAKLKFESG 176

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P   D +++ I + D +ID YRASGAGGQHVNTT
Sbjct: 177 VHRVQRVPVTESGGRIHTSAATVAVLPEP-DEVDVAIEDKDLKIDIYRASGAGGQHVNTT 235

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+P+G+VV CQ ERSQHKNKA+A  +LR +LY++  +  +        +    
Sbjct: 236 DSAVRITHLPSGLVVTCQDERSQHKNKAKAMQVLRTRLYDMRREAAQGAEAEARKAMVGS 295

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+      ++L+G  L + + A +A  +
Sbjct: 296 GDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLAELIDALIAEDQ 345


>gi|288928094|ref|ZP_06421941.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330928|gb|EFC69512.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 370

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 15/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L RE + L + ++  K     L       ++
Sbjct: 11  LDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVACLNSIAEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   + E     E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 71  LANESDAEMKEMAREELSANETERPKLEEEIKLLLVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ + + +        +G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFGMYKRFCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGVLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK  ++IAN  +S 
Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIANRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +      +IR+Y   P   V D R           + GD+   + A 
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIAGDIQAMIDAL 356


>gi|329848654|ref|ZP_08263682.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
 gi|328843717|gb|EGF93286.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 173/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  + E      +  E   L +E   +      ++ +         L E+
Sbjct: 9   LDQVMDRFRMIEARMESTT---DGAEIVRLSKEHAEIKPVCDAVERLLKARNQVPELEEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSN---DAYLEVHAGAGGTESQ 131
                D  +     + L  +K  +   +   +LL    D +    A LE+ AG GG E+ 
Sbjct: 66  IAL-GDPDLAPLAEEELGALKESLPDLERGVALLLAPKDKDENASAILELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+A  + +K E   + +GE  G K     + G   +G LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAAAQGWKVEVDSLSEGEAGGFKEIIASVTGEGVFGKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +EIEI + D RIDTYR+SGAGGQHVN TDSAVR
Sbjct: 185 RVPATEAGGRIHTSAATVAVLPEA-EDVEIEIHDKDLRIDTYRSSGAGGQHVNKTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV    E+SQH+N+A A   L+A++Y+++ Q  +   +    S+   G    
Sbjct: 244 ITHLPTGIVVTSS-EKSQHQNRAIAMRNLKARMYDMQRQALDTARSDSRKSQVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+   +    ++GD+   + A +A  +
Sbjct: 303 RIRTYNY-PQGRVSDHRINLTLYNLPQFMEGDMGQMINALIAEDQ 346


>gi|320169793|gb|EFW46692.1| peptide chain release factor 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 523

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 104/312 (33%), Positives = 172/312 (55%), Gaps = 11/312 (3%)

Query: 48  ERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +   L+  +  ++ +   +  + D   ++E +  E+D  + +           ++   + 
Sbjct: 187 QIAALNPLVDALQRMTAKRKDIDDLDAMVEASRNENDVEMRKMAQSEWTDAVEQLYELEQ 246

Query: 105 ESL----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E L       E D  +A LEV AG GG E+  +++ +  MY  +AE R +K E ++I   
Sbjct: 247 ELLNVLVPKNEVDDRNAILEVRAGTGGLEASLFSSDMFTMYQNYAEIRGWKFEVIDISRS 306

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           +  G K A+  I G   +G LK E GVHR+ R+   +S  R HTS  ++ + P   D ++
Sbjct: 307 DVGGFKEASATISGYGVFGHLKFESGVHRVQRVPQTESQGRVHTSTVTVALLPEAQD-VD 365

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           IE++E D RI+T RASGAGGQHVN T+SA+R+THIP+G+ V  Q++RSQHKN+A+A+++L
Sbjct: 366 IELNERDLRIETMRASGAGGQHVNKTESAIRVTHIPSGIAVHVQEDRSQHKNRAKAYSVL 425

Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           RA+LYE++ +K  +      + +   G    +IR+Y   P   V D R N+      + L
Sbjct: 426 RARLYEIQREKLAQERAAHRAEQVGTGSRSERIRTYNF-PQDRVTDHRVNVTLHGVPEFL 484

Query: 340 DGD-LDDFMKAT 350
            G+ LD+ + + 
Sbjct: 485 LGEGLDEIIASL 496


>gi|310816145|ref|YP_003964109.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
 gi|308754880|gb|ADO42809.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
          Length = 352

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 174/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R  FL  K +   L     E   L RE   L   +  +   Q    D     E 
Sbjct: 7   LAQLTDRFQFLEAKMQS-GLSG--AEIAALGREYSELKPVVDTLARYQALEADLASAEEW 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  +E    L+    E E   Q   L    AD   A LE+  G GG E+  +A
Sbjct: 64  LADPDMRAFAEEELPRLRTAFAEAEIEMQKALLPRDAADGRPAMLEIRPGTGGDEASLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R++E + ++ E +E  + E  GIK   + I+G   +  +K E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYSESKGWRFEIIEEAETELGGIKEVVVRIEGEGVFARMKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   ++++IEI+  D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLPEA-EAVDIEINPGDIRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PTG++V   Q +SQH+N+  A ++LRA+LY++E  + +   +   ++         +IR
Sbjct: 243 LPTGIIVTSSQ-KSQHRNRELAMDVLRARLYDMERSRVDGARSADRKAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       +L GDLD+ + A +A
Sbjct: 302 TYNF-PQGRMTDHRINMTLYRLDQILQGDLDEIVDALVA 339


>gi|77463465|ref|YP_352969.1| peptide chain release factor 1 [Rhodobacter sphaeroides 2.4.1]
 gi|119361594|sp|Q3J2B6|RF1_RHOS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77387883|gb|ABA79068.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides 2.4.1]
          Length = 351

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 176/345 (51%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+R  FL  +           E   L RE   L   +  I   +  L D      +
Sbjct: 7   LLQIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVVEISAYRTALEDLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D +  ++  +    +  +   L    AD+  A LE+  G GG E+ 
Sbjct: 64  LS---DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ E L++   E  GI+ AT  ++G  A+  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 181 RVPETEAQGRIHTSAATVAVLPEA-EEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +  +   ++         
Sbjct: 240 ITHLPTGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDRSE 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 299 RIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|317502848|ref|ZP_07960949.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
 gi|315666037|gb|EFV05603.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
          Length = 370

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 167/353 (47%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + ++  K     L        +
Sbjct: 11  LDGLESRFEEVSTLITDPDVIADQKRYVKLTKEWKDLGDIMNARKRYISCLDSIKEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQR---IKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              EDD  + +   + LQ    ++ ++E  + + LL      D+ +  +E+ AG GG E+
Sbjct: 71  LANEDDADMKEMAREELQENESLQPKLEE-EIKLLLVPKDPEDAKNVQMEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY ++ + + +     ++ +G   G K     I G + YG +K E GVHR+
Sbjct: 130 ALFAGDLFNMYKKYCDMKGWILSITDVSEGAVGGYKEIDFAISGTDVYGIMKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +SN R  TS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPVTESNGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +++ E QK  ++IA+  +S
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIADRRKS 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           L+G++ D + A    +
Sbjct: 309 LVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLNGNIQDMIDALTVAE 360


>gi|225870517|ref|YP_002746464.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
 gi|254790898|sp|C0MC15|RF1_STRE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225699921|emb|CAW93851.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
          Length = 360

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  ++ +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSIDDAEEM 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGE----ADSNDAYLEVHAGAGGTES 130
             E   D  I +   + L+  K   E  + +  L        D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDPDIEEMAKEELKEAKSAKEAYEDKLKLLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 306 ERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQ 350


>gi|221639323|ref|YP_002525585.1| peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
 gi|254790895|sp|B9KST8|RF1_RHOSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221160104|gb|ACM01084.1| Peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
          Length = 351

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 176/345 (51%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+R  FL  +           E   L RE   L   +  I   +  L D      +
Sbjct: 7   LLQIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVVEISAYRTALEDLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +     D +  ++  +    +  +   L    AD+  A LE+  G GG E+ 
Sbjct: 64  LS---DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE + ++ E L++   E  GI+ AT  ++G  A+  LK E GVHR+ 
Sbjct: 121 LFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 181 RVPETEAQGRIHTSAATVAVLPEA-EEVDLEIPAADLRIDTMRSSGAGGQHVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITH+PTG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +  +   ++         
Sbjct: 240 ITHLPTGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADARSADRKAQVGSGDRSE 298

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 299 RIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 [Mycobacterium gilvum PYR-GCK]
 gi|315443360|ref|YP_004076239.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
 gi|189039980|sp|A4T8L3|RF1_MYCGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145215381|gb|ABP44785.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           gilvum PYR-GCK]
 gi|315261663|gb|ADT98404.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
          Length = 357

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 114/326 (34%), Positives = 164/326 (50%), Gaps = 11/326 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           +     L  +  DP L  +   A+ + R    +   ++  ++++    D     ELA   
Sbjct: 12  LAEYGELEQRLADPDLHADAGAARKVGRRFAQISPIVATYRKLEAARGDLEAARELAA-- 69

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           DD S   E  D L     +++    + L      D++D  LEV +G GG ES  +A  L 
Sbjct: 70  DDASFAAEV-DELTDQIGDLDRALTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLA 128

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRLVRI 193
           RMY R+AE+  +    L     +  G K ATL I          +  LK E GVHR+ R+
Sbjct: 129 RMYIRYAERHGWTVTMLGETTSDLGGYKDATLSIASKGDSADGVWARLKFEGGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS + + VYP  D+  +++I ESD R+D YR+SG GGQ VNTTDSAVRIT
Sbjct: 189 PVTESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRVDVYRSSGKGGQGVNTTDSAVRIT 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312
           H+PTG+VV CQ ERSQ +NKA+A  +L A+L  L E Q   + +    S    +    +I
Sbjct: 249 HLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDV 338
           R+Y   P   + D R N +  +   V
Sbjct: 309 RTYNF-PENRIADHRINFKAHNLDQV 333


>gi|54020410|ref|YP_115756.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 232]
 gi|61214589|sp|Q601F9|RF1_MYCH2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53987583|gb|AAV27784.1| peptide chain release factor 1 (RF-1), peptide termination factor
           [Mycoplasma hyopneumoniae 232]
          Length = 361

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 171/342 (50%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              Q+   L    E   +  +  +   + +E   +   I   ++  D          + +
Sbjct: 11  KIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVLEDAKTILI 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +EDD  ++Q     +  +   +E  +       L   + D  D  +E+   AGG E+  +
Sbjct: 71  QEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L +MY +WA+ +K K + L        G       I G   Y  LK E GVHR+ R+
Sbjct: 131 VGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRIT
Sbjct: 191 PATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRIT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ  NK  A  +L++K+Y LELQK+++  +             +IR
Sbjct: 251 HIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N   +    ++ G+L+  ++A LA +K
Sbjct: 311 TYNY-PQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEK 350


>gi|209551100|ref|YP_002283017.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|238054472|sp|B5ZRR4|RF1_RHILW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209536856|gb|ACI56791.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 359

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 177/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAIAELADLETLL 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            ++  D  +       L  +K ++E  + E     L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R++ ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRITDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|15639045|ref|NP_218491.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|6093956|sp|O83090|RF1_TREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3322309|gb|AAC65047.1| peptide chain release factor 1 (prfA) [Treponema pallidum subsp.
           pallidum str. Nichols]
          Length = 351

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 111/348 (31%), Positives = 183/348 (52%), Gaps = 14/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            +    +   L  + E+P L+ +    +  MR+  +L   +         + +L D  +L
Sbjct: 5   LEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLEDAHVL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGT 128
           ++   +E D          ++ ++  +    K+ ++LL         +  +E+  G GG 
Sbjct: 65  IQ---DESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDSLQEKNIIMEIRGGTGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYT +AE ++++ E L + + E  G K  T  I G + YG L+ E GVH
Sbjct: 122 EAALFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +++ R HTS  ++ V P ++++ E++I   D R+D  RASG GGQ VNTTDS
Sbjct: 182 RVQRVPSTEASGRIHTSAVTVAVLPEMEET-EVDIRAEDVRVDVMRASGPGGQCVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307
           AVR+TH+PTG+VV CQ E+SQ KNKA+A  +LR+++Y+LE  KR+   A   +S      
Sbjct: 241 AVRLTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQVARARERKSQVGSGD 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
              +IR+Y   P   V D R  +       V+ G LDD ++   +A +
Sbjct: 301 RSERIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIEPLCIASR 347


>gi|115486501|ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|77552370|gb|ABA95167.1| Peptide chain release factor 1, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|215686469|dbj|BAG87730.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694739|dbj|BAG89930.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186139|gb|EEC68566.1| hypothetical protein OsI_36894 [Oryza sativa Indica Group]
 gi|222616368|gb|EEE52500.1| hypothetical protein OsJ_34701 [Oryza sativa Japonica Group]
          Length = 416

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 184/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A +    ++ +  DP +  +  E + L +    LD  +S  ++ +D          L
Sbjct: 58  LDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFKDCEKQIEETKVL 117

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTES 130
             E EDD  + +     ++ +  ++E  + +       +   D+ +  LEV AGAGG E+
Sbjct: 118 QKENEDDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNILLEVRAGAGGDEA 177

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++ E+  +K + +   + E+ G K+  + +KG   Y  LK E GVHR+
Sbjct: 178 GIWAGDLVRMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRV 237

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 238 QRVPQTETMGRVHTSTATVAIMPEA-DEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 296

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A+ +LRAKLYE++L  RE+  +I    K ++G G 
Sbjct: 297 DLIHKPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIKL--REQQESIRNQRKLQVGTGA 354

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +     +  L GD++  +++  ++++
Sbjct: 355 RSEKIRTYNYKD-NRVTDHRLKM-NFELTGFLMGDIESAVQSCSSMEQ 400


>gi|229586782|ref|YP_002845283.1| peptide chain release factor 1 [Rickettsia africae ESF-5]
 gi|259585242|sp|C3PNN0|RF1_RICAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|228021832|gb|ACP53540.1| Peptide chain release factor RF-1 [Rickettsia africae ESF-5]
          Length = 355

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 125/344 (36%), Positives = 186/344 (54%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L++ ++ IKE      +       
Sbjct: 7   LAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+E+        +   G   
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGNRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21]
 gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21]
          Length = 355

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 172/340 (50%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + L  +     L  +  E     R+   L+       E++    +   L ++
Sbjct: 8   LDQIAHRFAELEARMASGTLEGD--EFVQASRDYAELEPVAKVAAEVKAAREEIASLEDM 65

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E    LQ R+           L    AD+  A LE+ AG GG E+  +A
Sbjct: 66  LADPEMKAMAEEELAELQKRLPAAERQLAIAMLPRDSADNKPAMLEIRAGTGGDEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A +  +K E + ++  E  G K     + GPN +  LK E GVHR+ R+ 
Sbjct: 126 GDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVASVTGPNVFAKLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +++++  ++ +IDTYRASGAGGQHVNTTDSA+RITH
Sbjct: 186 ETESGGRIHTSAATVAVLPEP-DEVDVQLDPTELKIDTYRASGAGGQHVNTTDSAIRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIR 313
           +PTG VV CQ  RSQHKNK +A  +LR +LY+ + +  +   A   ++         +IR
Sbjct: 245 LPTGTVVTCQDGRSQHKNKEKAMQVLRTRLYDAQREATQGAEAEARKAMVGSGDRSERIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
           +Y   P   V D R  +       ++ G  L + ++A +A
Sbjct: 305 TYNY-PQGRVTDHRIGLTLQKLPQIIAGPGLAELVEALIA 343


>gi|229819782|ref|YP_002881308.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
 gi|229565695|gb|ACQ79546.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
          Length = 373

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 165/340 (48%), Gaps = 13/340 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +     +     DP +  +   A+ L R    L   +   +  +    D     ELA
Sbjct: 18  EPMLAEHREIEAALADPAVHADAGRARALGRRYAELGRVVGAYRAWRRAADDATAAAELA 77

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +E+D           LQ  + +        L      D  D  LE+ AG GG ES  +A 
Sbjct: 78  VEDD---AFASEVPALQVAEADAAEHLRRVLVPRDPDDGRDVILEIKAGEGGEESALFAG 134

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMY R+AE+R ++T+ LE  + +  G K   + +K           +  LK E GVH
Sbjct: 135 DLLRMYLRFAERRGWQTQVLEATESDLGGYKDVQVAVKSRGAAAPEDGVWAALKYEGGVH 194

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P VDD  E+EI   D RID +R+SG GGQ VNTTDS
Sbjct: 195 RVQRVPVTESQGRIHTSAAGVLVLPEVDDPGEVEIEGGDLRIDVFRSSGPGGQSVNTTDS 254

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L   + +     A     S+   + 
Sbjct: 255 AVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAAQQEAAAAEAAEARRSQVRTVD 314

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +IR+Y   P   + D RT  +  +   VL GDLD  +
Sbjct: 315 RSERIRTYNF-PENRIADHRTGYKAYNLDAVLAGDLDAVV 353


>gi|34580401|ref|ZP_00141881.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
 gi|28261786|gb|EAA25290.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
          Length = 355

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 184/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L++ ++ IKE      +       
Sbjct: 7   LAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++Y E   +K +E A+            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|224531646|ref|ZP_03672278.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
 gi|224511111|gb|EEF81517.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
          Length = 357

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 128/342 (37%), Positives = 200/342 (58%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  ++  L  K +D +L +N  E   +++E  HL+   +     ++I  ++ DN  +
Sbjct: 6   LNSATSKIKSLEEKLQDINLIKNQKEYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQ 131
           LE   +++   ++++   +L + K ++E++    LL   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEEQQEMKELIKQELIDLDKKKEDIEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++     +E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEIEI-NEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PT +VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTRIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|226492409|ref|NP_001142228.1| hypothetical protein LOC100274396 [Zea mays]
 gi|194707706|gb|ACF87937.1| unknown [Zea mays]
          Length = 416

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 196/365 (53%), Gaps = 18/365 (4%)

Query: 2   KLSRQL-----NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           ++S+QL       +          QR ++L  +   P    +  E     +E + L++ +
Sbjct: 48  EMSQQLPANLVEIMEQRMKL--IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTM 103

Query: 57  SFIKEIQDRLCDNLILLELA----LEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGE 111
             IK+++ +  +   L  L      E+D   + +E        +  ++++ F SLL   E
Sbjct: 104 ELIKDLRSKQEEIEGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDE 163

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  D  LEV AG GG E+  +A  + RMY ++A+K  +K + ++I +    G K A+  
Sbjct: 164 ADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGT 223

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I GP A+G LK E G+HR+ R+   + + R HTS  S+ V P   D +++++   D RID
Sbjct: 224 ISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQA-DEVDVQLRNEDLRID 282

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+ G+GGQ VNTTDSAVRITHIPTG VV  Q ERSQH NKA+A  +LRA+LYELE ++
Sbjct: 283 TYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRR 342

Query: 292 -REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
              + + +            +IR+Y   P   V D R  +   S +DV++G+ LD F+ A
Sbjct: 343 LHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDA 401

Query: 350 TLAIK 354
            L  +
Sbjct: 402 LLLQE 406


>gi|182677881|ref|YP_001832027.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|238691232|sp|B2IHL7|RF1_BEII9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182633764|gb|ACB94538.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 358

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 177/348 (50%), Gaps = 20/348 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  ++R   ++ +  +     N   A    L RE   LD     I+  +D + +   + 
Sbjct: 7   LDLILRRHEEISARLTE-----NPDAATFVSLSRELAGLDEVAQAIRAYRDEMTEISGME 61

Query: 74  ELALEEDDC-----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +  +            +E  D  QR+    ++ +   L     D   A LE+ AG GG 
Sbjct: 62  AMLADPATEPELLALAEEELQDARQRLGAFEQHLRIALLPKDADDEKSAILEIRAGTGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE + +  E L + +G   G K     I G   +  LK E G H
Sbjct: 122 EAALFAGDLFRMYQRYAEAKGWGVEILSVSEGTAGGYKEIVAEITGKGVFAKLKFESGTH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   + +++EI+E+D +IDT RA GAGGQHVN T+S
Sbjct: 182 RVQRVPDTETQGRIHTSAATVAVLPQA-EEVDVEINEADLKIDTMRAQGAGGQHVNKTES 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG V+  Q ERSQHKN+A+A ++LR+++Y+ +   ++  A      K ++G 
Sbjct: 241 AIRITHLPTGTVIFVQDERSQHKNRARAMSLLRSRIYDAKR--QQLEAERAADRKAQVGS 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           G    +IR+Y   P   + D R N+       V+ G+ LD+ + A + 
Sbjct: 299 GDRSERIRTYNF-PQGRLTDHRINLTLYKLDKVMTGEALDEVIDALIT 345


>gi|147818957|emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 168/345 (48%), Gaps = 40/345 (11%)

Query: 19   AVQRLSFLNTKTED-PHLWQNVI----EAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              QRLS +  ++               E     +E + L ++I  I E++++  +   L 
Sbjct: 1211 MEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSSIEHITELRNKQKEIDGLK 1270

Query: 74   ELALE-EDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             L  E  +D  +L   ++ L +     K          L   EAD  D  LEV AG GG 
Sbjct: 1271 SLMAECSEDKDMLNMAAEELGQAAGEEKRLQNLLLKSLLPKDEADERDCILEVRAGTGGE 1330

Query: 129  ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
            E+  +A  + +MY ++++K  +K E ++I + +  G K A+  I G   YG LK E G+H
Sbjct: 1331 EASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLKFESGIH 1390

Query: 189  RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
            R+                            +++++   D RIDTYR+ G+GGQH NTT+S
Sbjct: 1391 RVQ---------------------------VDVQLRNEDLRIDTYRSGGSGGQHANTTNS 1423

Query: 249  AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIG 307
            AVRITHIP+G+ V  Q ERSQH NKA+A  +L AKLYE+E  + +++ + +         
Sbjct: 1424 AVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRMEQIGSGD 1483

Query: 308  WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   V D R  I   S +DV+ G+ LD F+ A L
Sbjct: 1484 RSERIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENLDVFIDALL 1527


>gi|299140684|ref|ZP_07033822.1| peptide chain release factor 1 [Prevotella oris C735]
 gi|298577650|gb|EFI49518.1| peptide chain release factor 1 [Prevotella oris C735]
          Length = 370

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 98/353 (27%), Positives = 165/353 (46%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + ++  K     L       ++
Sbjct: 11  LDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIREAKDI 70

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  +     + LQ    ++ ++E  + + LL      D+ +  +E+ AG GG E+
Sbjct: 71  LANESDSDMKDMAREELQQNETLQPQLEE-EIKLLLIPKDPEDAKNVQMEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+ + + +     ++ +G   G K     I G + YG +K E GVHR+
Sbjct: 130 ALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +SN R  TS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPVTESNGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +++ E QK  ++IAN  +S
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIANRRKS 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           L G++ D + A    +
Sbjct: 309 LVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAE 360


>gi|15828576|ref|NP_325936.1| peptide chain release factor 1 [Mycoplasma pulmonis UAB CTIP]
 gi|20139344|sp|Q98RA5|RF1_MYCPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14089518|emb|CAC13278.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis]
          Length = 359

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 111/356 (31%), Positives = 167/356 (46%), Gaps = 12/356 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
               N L  + D      +   LN +   P +  ++   K   RE   + +      +  
Sbjct: 3   KSMYNSLKSILD------KYQELNQELLKPEVLSDIKLYKKFSRELNSIKSISEEFSKYL 56

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYL 119
           +          +  +E D  ++      +   + +    VE  +   L   + D  D  +
Sbjct: 57  NYEKTIESSKIILAQEKDEELISLAKKEILECEEKMSSLVEELKILLLPKDKNDELDVIM 116

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+   AGG E+  +A  L  MY++WA     K   L+ +     G       I G  AY 
Sbjct: 117 EIRGAAGGDEANIFAGDLFEMYSKWANNNNMKVSVLDRNYATSGGFTLIVFTISGEKAYS 176

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHR+ RI   +S  R HTS +++   P +DD IE+EI+ SD +IDT+R+SGAG
Sbjct: 177 KLKFESGVHRVQRIPVTESKGRVHTSTATVTAMPEIDDDIEVEINPSDLKIDTFRSSGAG 236

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITHIPTG++   Q+ RSQ  N+  A  +L+AKLY+ E QK+ E     
Sbjct: 237 GQSVNTTDSAVRITHIPTGIISSSQEGRSQISNRELALKILKAKLYDHENQKKLEKVGQY 296

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                      +IR+Y   P   V D R N   +S   +++G L   + + LA ++
Sbjct: 297 RKLAGSGARSEKIRTYNY-PQDRVTDHRINF-SSSLKQIMEGKLQIIIDSLLAEEQ 350


>gi|296445919|ref|ZP_06887870.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
 gi|296256587|gb|EFH03663.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
          Length = 356

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 105/342 (30%), Positives = 171/342 (50%), Gaps = 13/342 (3%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  ++R   +  +    P    +      L RE   LD+ ++ I+  +    +   L E
Sbjct: 7   LDLILRRHDEIGARLAAGP----DAASFVALSRELATLDDVVARIRTWRATSAEIAGLGE 62

Query: 75  L----ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +    ALE +  + ++ E       +    +  +   L    AD     LEV AG GG E
Sbjct: 63  MLADPALEPEMRAFVEGELDAAESALASAEQELKLALLPKDSADEKGVILEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L R Y ++A  + +  E L   +G   G K     I G   Y  LK E GVHR
Sbjct: 123 AALFAGDLFRAYQKYAGVKGWGVEILSASEGALGGYKEIVAEISGRGVYARLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + +++ I + D +I+T R+ GAGGQHVN T+SA
Sbjct: 183 VQRVPATETQGRIHTSAATVAVLPQA-EEVDVAIDDKDLQIETMRSGGAGGQHVNKTESA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           +RITH+P+G+VV  Q+ERSQH+N+A+A  +LR++L++ E Q+ +   A   ++       
Sbjct: 242 IRITHLPSGIVVMMQEERSQHRNRAKAMEVLRSRLFDAERQRLDSARAADRKAQVGSGDR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+       V++G+LD+   A 
Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGELDEIFDAL 342


>gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
 gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
          Length = 362

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 164/339 (48%), Gaps = 12/339 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D       
Sbjct: 6   LAALLDEYAELEKRLADPAIHADQNAARRVGRRYAELSPLHKAAAELEQARADLAAAR-- 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            L  +D S   ET      +    E      +     D+ D  +E+ AG GG ES  +A 
Sbjct: 64  ELAAEDPSFAAETESIAAGLPALEERLAELLIPRDPHDAKDVIVEIKAGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMYTR+AE+R + TE ++  D +  G+K  +L IK       G   +  LK E GVH
Sbjct: 124 DLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVWSRLKWEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++ +  +D RID +R+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLVLPEA-EDVDVSVDPNDLRIDVFRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIG 307
           AVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L    + Q     ++  ++    + 
Sbjct: 243 AVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARLLAAAQEQADAAASDARKAQVRTVD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              +IR+Y   P   + D R      +    L G+LD  
Sbjct: 303 RSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|302869596|ref|YP_003838233.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315503942|ref|YP_004082829.1| peptide chain release factor 1 [Micromonospora sp. L5]
 gi|302572455|gb|ADL48657.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315410561|gb|ADU08678.1| peptide chain release factor 1 [Micromonospora sp. L5]
          Length = 362

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 168/349 (48%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D       
Sbjct: 6   LAALLDEYAELERRLADPAIHADQGTARRVGRRYAELVPLHKAAGELEQARADLAAA--- 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
                + +     +D +      +E +  E L+     D+ D  +E+ AG GG ES  +A
Sbjct: 63  RELAAEDATFAVEADTIAASLPALEERLAELLIPRDPHDAKDVIVEIKAGEGGEESALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGV 187
             LLRMYTR+AE+  + TE ++  D +  G+K  +L IK       G   +  LK E GV
Sbjct: 123 GDLLRMYTRYAERHGWVTEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P   + +++ I  ++ RID +R+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESQGRIHTSAAGVLVLPEA-EDVDVTIDPNELRIDVFRSSGPGGQSVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEI 306
           SAVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L    + Q     ++  ++    +
Sbjct: 242 SAVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARLLAAAQEQADAAASDARKAQVRTV 301

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R      +    L G+LD  + A     +
Sbjct: 302 DRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGVLDALAEADR 349


>gi|15892685|ref|NP_360399.1| peptide chain release factor 1 [Rickettsia conorii str. Malish 7]
 gi|20139335|sp|Q92HK9|RF1_RICCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15619858|gb|AAL03300.1| peptide chain release factor RF-1 [Rickettsia conorii str. Malish
           7]
          Length = 355

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 183/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L++ ++ IKE      +       
Sbjct: 7   LAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + +  E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWHFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++Y E   +K +E A+            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|300025029|ref|YP_003757640.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526850|gb|ADJ25319.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 359

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 109/323 (33%), Positives = 170/323 (52%), Gaps = 14/323 (4%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKL 97
             +   L +E   L  A + I+ ++    ++  L +L  +   D  +          +  
Sbjct: 29  QAQYVKLTKEFAELSPAAAQIEALRKAEAESADLEQLLRDPSADKDMADLAYAERAALAE 88

Query: 98  EV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +    +  +   L    AD   A LEV AG GG E+  +A  L RMY+R+A+ R +K E
Sbjct: 89  RIGGLEQQLRIALLPKDAADEKSAILEVRAGTGGDEAALFAADLFRMYSRYADLRGWKVE 148

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +   + +  G K     I G   +  LK E GVHR+ R+   +++ R HTS +++ V P
Sbjct: 149 VISASENDLGGYKEIVASITGEGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLP 208

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
              + +EI+I   D RIDT RA GAGGQHVN T+SAVRITH+PTG+VV    E+SQH+N+
Sbjct: 209 EA-EDVEIDIKPDDIRIDTMRAGGAGGQHVNKTESAVRITHLPTGIVV-VSAEKSQHQNR 266

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNI 330
             A N+L+A++YELE +K        ++ K+++G G    +IR+Y   P   V D R N+
Sbjct: 267 RLAMNVLKARVYELEREK--AATERSDARKSQVGSGDRSQRIRTYNF-PQGRVTDHRINL 323

Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352
              +  +V+ G+ LD  + A + 
Sbjct: 324 TLYNLDEVMVGNGLDALVDALIT 346


>gi|330994789|ref|ZP_08318711.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
 gi|329758050|gb|EGG74572.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
          Length = 353

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 168/344 (48%), Gaps = 15/344 (4%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   D  V R   L     +     +  +A    RE   L+  ++ +  ++        
Sbjct: 4   FDHRLDRIVARCDELQALLAEGLSGADFSQA---SREYAELEPIVARVNALRAAEEAERD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++     D  + +     L  ++ ++       +   L   EAD   A LE+   AGG
Sbjct: 61  ASQMLA---DPEMRELAQAELDALRTQIPTLRHDIRLAMLPRDEADERSAILEIRPAAGG 117

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L   Y R+A+ R ++ E LE    E  G++     I G   +  LK E GV
Sbjct: 118 DEAGLFAAELFGAYQRYADLRGWRFEVLEYDQSELGGLREGIASITGRGVFARLKYESGV 177

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++E++E D RID YRASGAGGQHVN T+
Sbjct: 178 HRVQRVPATESQGRIHTSTVTVAVLPEA-EEVDVEVNEGDLRIDVYRASGAGGQHVNKTE 236

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +VV  Q+E+SQHKN+A+A  +LRA+LYE       E       ++   G
Sbjct: 237 SAVRITHLPTNIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAHETRAADRRAQVGTG 296

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   V D R  +       V+ G+LD+F+ A 
Sbjct: 297 DRSERIRTYNF-PQGRVTDHRIGLTLYKIDRVMAGELDEFVDAL 339


>gi|313678949|ref|YP_004056688.1| bacterial peptide chain release factor 1 (brf-1) [Oceanithermus
           profundus DSM 14977]
 gi|313151664|gb|ADR35515.1| bacterial peptide chain release factor 1 (bRF-1) [Oceanithermus
           profundus DSM 14977]
          Length = 358

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      +    L  +  DP +  +    +   R    L   I   +  +    +   
Sbjct: 1   MLDKLKKLEEEYRALERELGDPEVLADAARFREKSRRYAELGEVIEAFRAYRRVQDELEQ 60

Query: 72  LLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ELA + E      +E ++  +++    +  +   L    AD  +A +E+ AG GG E+
Sbjct: 61  ARELAADPELGEMAREEAAELEEKLGELEKKLELLLLPRDPADVRNAIVEIRAGTGGQEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MYTR+AE+  ++ E LE H  +  G    + ++KGP AYG  K E GVHR+
Sbjct: 121 ALFAGNLFEMYTRYAERLGYQVEMLESHPTDLGGFSKVSFMVKGPGAYGTFKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P  ++S ++E+  S+ RID  RASG GGQ VNTTDSAV
Sbjct: 181 QRVPATETQGRIHTSTATVAVLPEAEES-DVELDMSEVRIDVMRASGPGGQGVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ H PTG+++  Q  RSQ KN+ +A ++LR++L  LE+++ EE A +  S   +IG G 
Sbjct: 240 RVVHEPTGIIITIQDSRSQIKNREKALSILRSRL--LEMKRAEEEAALRTSRLAQIGTGE 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R +    +   VL G+LD+  +A     +
Sbjct: 298 RSEKIRTYNF-PQSRVTDHRIHFTTHNLEGVLAGELDELTEALKKADQ 344


>gi|320102129|ref|YP_004177720.1| peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC
           43644]
 gi|319749411|gb|ADV61171.1| bacterial peptide chain release factor 1 (bRF-1) [Isosphaera
           pallida ATCC 43644]
          Length = 364

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 176/344 (51%), Gaps = 14/344 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILLELAL 77
           +R   LN +   P L  +      LMRER  L       +   E+  R  +   ++E   
Sbjct: 10  RRYEELNRELASPDLVNDPGRLAALMRERSALAKLAVPYARYLELTRRRAEVQQVIETES 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA---DSNDAYLEVHAGAGGTESQDWA 134
           + +     Q   D L + + E      ++L+  +A   D     +E+ AG GG E+  +A
Sbjct: 70  DPEMKEYAQAEFDQLAQAEAESAEY-LKTLIYEQATGSDHAGVIVEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  MY R+ E++ ++ E LEI   E  G + A+  ++G  AY  L+ E G HR+ R+ 
Sbjct: 129 RDLYEMYRRFVERQGWRFEPLEIAPTELGGFREASFGVRGEGAYRHLQFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EIE+ + D +ID  RA G GGQH N T+S VRITH
Sbjct: 189 VTETQGRIHTSAATVAVLPEP-EEVEIELRDEDLQIDVMRAGGPGGQHQNKTESGVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           +P+G+VV C+ ERSQHKNKA+A  +LR++LYE +       +   ++ ++ IG G +   
Sbjct: 248 LPSGIVVNCRDERSQHKNKAKALRILRSRLYEAQRN--AAQSQRSQTRRSLIGSGDRSQR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++ G+L+   +  +   +
Sbjct: 306 IRTYNF-PQNRVTDHRINLTLHQLDRIVAGELELVTRPLIEHDR 348


>gi|294678208|ref|YP_003578823.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
 gi|294477028|gb|ADE86416.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
          Length = 351

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 123/350 (35%), Positives = 175/350 (50%), Gaps = 24/350 (6%)

Query: 16  WDNAVQRLSFLNTKT--EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
                 R  FL  K     P       E   L RE   L   ++ I   +  L D     
Sbjct: 7   LAQITARFEFLEAKLNTALP-----PAEIATLSREYSDLRPVVTEIAAYRQSLDD----- 56

Query: 74  ELALEED---DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
            LA  E    D  +     + L R+K  +   +       L    AD+  A LE+  G G
Sbjct: 57  -LAEAEGWLSDPEMKTLAEEELPRLKARIPAMEQALRLALLPKDAADARPAILEIRPGTG 115

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A+ L RMY R AEK  ++ E LE    E  G+K A   I+G   +  LK E G
Sbjct: 116 GEEAALFAHDLWRMYERHAEKMGWRFERLEFTATELGGVKEAMARIEGEGVFARLKYESG 175

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTT
Sbjct: 176 VHRVQRVPETEAGGRIHTSAATVAVLPEA-EEVDIDIPAADIRIDTMRSSGAGGQHVNTT 234

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTE 305
           DSAVRITH+PTG++V    E+SQH+N+A A  +LRA+LYE+E ++   E A    S    
Sbjct: 235 DSAVRITHLPTGIIVTSS-EKSQHQNRANAMAVLRARLYEIERERLATERAENRRSQVGS 293

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +IR+Y   P   + D R N+   +   +L GDL + + A +A  +
Sbjct: 294 GDRSERIRTYNF-PQGRMTDHRINLTLYALPQILAGDLGEVIDALVAHDQ 342


>gi|294673455|ref|YP_003574071.1| peptide chain release factor 1 [Prevotella ruminicola 23]
 gi|294472502|gb|ADE81891.1| peptide chain release factor 1 [Prevotella ruminicola 23]
          Length = 371

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/352 (26%), Positives = 156/352 (44%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 12  LDGLEARFEEVSTLITDPAVIADQQRFVKLTKEYKDLGDIMDARKRYIACLNGIKEAKDI 71

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L           E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 72  LANETDPEMKEMAREELAINEELQPQLEEEIKIALIPKDPEDAKNVEMEIRAGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY  + E + ++     + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 132 LFAGDLFKMYKNYCESKGWQVSITYVSEGAVGGFKEVDFSVTGADVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +SN R  TS +++ V P   D  E+ ++E + + DT+R+SGAGGQ+VN  +S VR
Sbjct: 192 RVPVTESNGRMQTSAATVAVLPEA-DKFEVHVNEGEIKWDTFRSSGAGGQNVNKVESGVR 250

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG      ++C + R Q KNK +A + L   +Y+ E QK  ++IAN  +S 
Sbjct: 251 LRYMWKNPNTGETEEILIECTETRDQPKNKERALSRLYTFIYDKEHQKYVDDIANRRKSL 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R           L GD+   + A    +
Sbjct: 311 VSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGDIQAMIDALTVAE 361


>gi|312601125|gb|ADQ90380.1| Peptide chain release factor 1 [Mycoplasma hyopneumoniae 168]
          Length = 357

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 170/342 (49%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              Q+   L    E   +  +  +   + +E   +   I   ++  D          + +
Sbjct: 7   KIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTILI 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +EDD  ++Q     +  +   +E  +       L   + D  D  +E+   AGG E+  +
Sbjct: 67  QEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L +MY +WA+ +K K + L        G       I G   Y  LK E GVHR+ R+
Sbjct: 127 VGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRIT
Sbjct: 187 PATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+V   Q ERSQ  NK  A  +L++K+Y LELQK+++  +             +IR
Sbjct: 247 HIPTGIVATSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSEKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N   +    ++ G+L+  ++A LA +K
Sbjct: 307 TYNY-PQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEK 346


>gi|302759765|ref|XP_002963305.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
 gi|300168573|gb|EFJ35176.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
          Length = 927

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 117/332 (35%), Positives = 180/332 (54%), Gaps = 22/332 (6%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   R + L+    +P +  +  E   + +E + LD ++  IK ++ +  + + L EL  
Sbjct: 26  SIEDRHACLSKALLEPGIASD--ELIKMNKELRKLDYSVDMIKALRAKEKEVIGLKELVK 83

Query: 78  EE-DDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQD 132
           E  +D  + +  S  LQ    EV   Q + LL      EADS         GAGG E+  
Sbjct: 84  ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSR--------GAGGDEASI 135

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L +MY ++     ++ E L I   +  G K A+ +I G   YG LK E GVHR+ R
Sbjct: 136 FASDLFKMYEKYTANNSWRFEVLSITTTDTRGYKEASAVISGDGVYGALKFESGVHRVQR 195

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS +S+ + P  ++ +++EI   + +IDTYRA GAGGQHVNTT SAVR+
Sbjct: 196 VPVTEKAGRIHTSTASVAILPEANE-VDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRV 254

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH PTG+VV  Q ERSQHKNKA+A ++L A+LYELE  +    A+  E  + +IG     
Sbjct: 255 THAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AAASRSELRQDQIGSSDRS 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   V D +  + + +   +++G
Sbjct: 313 ERIRTYNF-PQGRVTDHQVGVTQHAIEQIMEG 343


>gi|317125570|ref|YP_004099682.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
 gi|315589658|gb|ADU48955.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
          Length = 359

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 176/355 (49%), Gaps = 21/355 (5%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  +  + D        + L  +  DP +  +    + L +    L   ++  +  Q   
Sbjct: 2   LESVQAILD------EYADLEARLADPAVHADQDLVRTLNKRYAALGPTVASARAWQTAR 55

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-YLEVHAGA 125
            D     EL  E  D +   E    L+ +  E E      L+  + D +    LEV AG 
Sbjct: 56  DDVEAARELGAE--DAAFAAEV-PALEGVLAETEEHLLRQLVPRDPDDDRDVILEVKAGE 112

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--------GPNA 177
           GG ES  +A  LLRMY R+AE+R ++T   +  + +  G K   + I+        G   
Sbjct: 113 GGEESALFAGDLLRMYLRYAERRGWRTVVEDATESDLGGYKDVRVSIRSRGHQPGPGEAP 172

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           +  LK E GVHR+ R+   +S  R HTS + + V P   + +E+ I   D RID YR+SG
Sbjct: 173 WARLKYEGGVHRVQRVPVTESQGRVHTSAAGVLVMPEA-EEVEVTIDPHDLRIDVYRSSG 231

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK  A  +LRA+L++L   + +  A+
Sbjct: 232 PGGQSVNTTDSAVRITHLPTGLVVSCQNEKSQLQNKEAALRVLRARLHQLAKDEADAEAS 291

Query: 298 IGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               S+   +    +IR+Y   P   + D RT  +  +   V+DGDLD  +++ +
Sbjct: 292 AARRSQVRTVDRSERIRTYNF-PENRISDHRTGYKSYNLDHVIDGDLDPVVQSAI 345


>gi|154490829|ref|ZP_02030770.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
 gi|154088577|gb|EDN87621.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
          Length = 369

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 16/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L+  I   KE    L        L
Sbjct: 11  LDGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEAR-L 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + E D  + +   +     +  +    E  +   + +   D  +A +E+  G GG E+ 
Sbjct: 70  MMAETDPEMREIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 LFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEA-DEFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGV     ++C + R Q KNK +A   LR+ +Y+ E QK  ++IAN  ++ 
Sbjct: 249 LRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIANKRKTM 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + S  +DGD+   +   +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAE 359


>gi|168036672|ref|XP_001770830.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677889|gb|EDQ64354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 184/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A +    L+ +  DP +  N  E + + +    L+      +  ++         E+
Sbjct: 18  LDSAERTYKELSMRLADPDVANNNNEYQKIAKSLAELEEIYQTYQRFKECEAQLDDAKEM 77

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
           A +   D  + +  ++    +  +VE  + +     L S   DS +  LEV AG GG E+
Sbjct: 78  AKDAAGDREMAEMAAEEANILAQQVEELEEQLKVMLLPSDPLDSRNIMLEVRAGTGGDEA 137

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY +++E+  ++   +   + E+ G K   L I G   Y  LK E GVHR+
Sbjct: 138 GIWAGDLVRMYQKFSERNNWRCSPVSCTEAEKGGYKEFVLEITGERVYSKLKYESGVHRV 197

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P V D +E+ I   D  + T R+ GAGGQ+VN  ++A+
Sbjct: 198 QRVPATESQGRVHTSTATVAIMPEV-DEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 256

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L  RE+   I  + ++++G G 
Sbjct: 257 DLFHKPTGIRIFCTEERSQLKNKIRAFQLLRAKLYEIKL--REQQETIRNARQSQVGTGA 314

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D RT I     + VL+G+L+  +++  A+++
Sbjct: 315 RSEKIRTYNYKD-NRVSDHRTKI-NFDLTTVLNGELEGPVQSCAALEQ 360


>gi|269215990|ref|ZP_06159844.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
 gi|269130249|gb|EEZ61327.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
          Length = 356

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 166/342 (48%), Gaps = 8/342 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++  + +  K  DP +  +  E   L +E  +    +    +      D     E+  
Sbjct: 11  KIIEGYAEIEEKLGDPAVLADQREYTRLSKEFANQAALVGKANDYLQACRDIDDAKEMLG 70

Query: 78  EEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + D     QET    + ++    E  +   +    AD  D  +E+   AGG E+  +A  
Sbjct: 71  DPDMREFAQETIAESEAKLPALAETIKVMLIPDDPADEKDIIVEIRGAAGGDEAAIFAGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L +MY R+ E R +K E L+    E  G K     +KG + Y  +K E GVHR+ R+   
Sbjct: 131 LYKMYVRFCESRGWKVENLDASASEAGGFKKIEFKVKGDHVYSLMKFESGVHRVQRVPKT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R  TS +++ V P   D I++EI+E D RID YRA G GGQ VNTTDSAVRITH+P
Sbjct: 191 ESQGRIQTSTATVAVLPEA-DEIDVEINEGDLRIDVYRAGGPGGQCVNTTDSAVRITHLP 249

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VVQ Q ++SQ +NK  A  +LRA+LY  E    E+ A  G     +IG G    +IR
Sbjct: 250 SGLVVQSQDQKSQLQNKIAAMAVLRARLY--EKMLAEQQAAEGAERLAQIGSGDRAEKIR 307

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R     T    +L   L D + A  A  +
Sbjct: 308 TYNA-PQDRVTDHRIGYNGTYNGVLLADGLADLIVALQAADR 348


>gi|256827314|ref|YP_003151273.1| peptide chain release factor 1 [Cryptobacterium curtum DSM 15641]
 gi|256583457|gb|ACU94591.1| bacterial peptide chain release factor 1 (bRF-1) [Cryptobacterium
           curtum DSM 15641]
          Length = 357

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 173/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L T+  DP +  +  E   L +E  H     +  +     + D     E+
Sbjct: 7   LEKIIEAYRDLQTRMSDPAVISDQKEYNRLAKEYAHQGPLATAARTYVQDIDDLAEAKEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE    ++     +E   +F  + +  AD  D  +E+ AGAGG E+  +A
Sbjct: 67  ISDADMREFAQEEITRIENELPGLEDDIKFMLIPADPADDKDIIVEIRAGAGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY+ +A+ + +K E L     E  G K     +KG   Y  +K E GVHR+ R+ 
Sbjct: 127 GDLFKMYSHFADVKGWKIEVLNASASEAGGYKEIQFKVKGDKVYSEMKFESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +E+++ + D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 187 KTESQGRIHTSTATVAVLPEA-DEVEVDVKQEDLRIDVYRAGGPGGQCVNTTDSAVRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VVQ Q ++SQ +NK  A  +LRA+LY  E    E+ A  G   + +IG G    +
Sbjct: 246 LPTGLVVQSQDQKSQLQNKIAAMAVLRARLY--EKMLEEQRAAEGAERRAQIGTGDRSEK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLD---GDLDDFMKATLAIKK 355
           IR+Y   P   V D R     T    +++     L+D + A  A  +
Sbjct: 304 IRTYNG-PQDRVTDHRIGYNGTYNGILMNAGGAGLEDLITALQAADR 349


>gi|282877960|ref|ZP_06286769.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
 gi|281299961|gb|EFA92321.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
          Length = 370

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 158/348 (45%), Gaps = 15/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T    P +  +      L +E + L + +   K     L       ++
Sbjct: 11  LEGLEARFEEVSTLITAPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  +       E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 71  LANETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY  + + + +      +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DQFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IAN  +S 
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYIDDIANRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +      +IR+Y   P   V D R           ++GD+   + A 
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVNGDIQAMIDAL 356


>gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 317

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 9/306 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE----VEYKQFES 106
            L +      + Q    D      +    DD  + +   + L+  K +     +  Q   
Sbjct: 1   QLSDVSRCFTDWQQVQDDIETAQMML---DDPEMREMAQEELREAKEKSEQLEQQLQVLL 57

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           L     D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K
Sbjct: 58  LPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYK 117

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
                I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +
Sbjct: 118 EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPA 177

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ 
Sbjct: 178 DLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHA 237

Query: 287 LELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            E  KR++       +    G    + R+Y   P   V D R N+      + ++G LD 
Sbjct: 238 AETAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDM 296

Query: 346 FMKATL 351
            ++  +
Sbjct: 297 LIEPIV 302


>gi|51473710|ref|YP_067467.1| peptide chain release factor 1 [Rickettsia typhi str. Wilmington]
 gi|61214605|sp|Q68WK7|RF1_RICTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51460022|gb|AAU03985.1| peptide chain release factor 1 (RF-1) [Rickettsia typhi str.
           Wilmington]
          Length = 355

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 125/344 (36%), Positives = 191/344 (55%), Gaps = 16/344 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL----L 73
             + +   L  K     +  +  E     +E   L++ +  IKE      +        L
Sbjct: 9   KILDKYENLGRKLSS-GIIGD--EFVKASKEYAELEDIVVKIKEYNKVKSELEEANNLRL 65

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           E+AL+     ++      L+ +  ++E   +   L   EADS  A +EV AG+GG E+  
Sbjct: 66  EVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGGEEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A +L  MY R+AE + ++ E L I +    G K A+  IKG + +  LK E GVHR+ R
Sbjct: 126 FAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIKGKDVFSKLKFESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++I+I + D RIDTYR+SGAGGQHVNTTDSAVRI
Sbjct: 186 VPETESQGRIHTSAATVAVLPEA-EGVDIKIEDKDLRIDTYRSSGAGGQHVNTTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+ V  Q E+SQHKNKA+A  +LRA+LY  E ++R++     +S + ++G G   
Sbjct: 245 THIPTGITVALQDEKSQHKNKAKALKILRARLY--EEKRRQKEQERSDSRRWQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
            +IR+Y    +  V D R N+      +V+  G LD+F++A +A
Sbjct: 303 ERIRTYNFL-HGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345


>gi|255559292|ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
 gi|223540051|gb|EEF41628.1| peptide chain release factor, putative [Ricinus communis]
          Length = 370

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 180/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A +    L+ K  DP +  N  E + L +    LD  +S  +  +D          L
Sbjct: 12  LESAEKTWKELSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKDCEKQLEETKAL 71

Query: 76  ALEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           A EE  D  + +  +  +  +  E++      +   L S   D+ +  LEV AG GG E+
Sbjct: 72  AKEEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIMLEVRAGTGGDEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++ E+  +K   +   + E+ G K+  + +KG   Y  LK E GVHR+
Sbjct: 132 GLWAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKYESGVHRV 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 192 QRVPQTETQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q +NK +A  +LRAKLYE+++  RE+  +I    K ++G G 
Sbjct: 251 DLFHKPTGIRIFCTEERTQLQNKTRALQLLRAKLYEMKV--REQQESIRNQRKLQVGTGA 308

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +     +  L GD+++ ++A  + ++
Sbjct: 309 RAEKIRTYNYKD-NRVTDHRLKM-NFELTSFLQGDIENAVQACASTEQ 354


>gi|291320737|ref|YP_003516002.1| peptide chain release factor 1 [Mycoplasma agalactiae]
 gi|290753073|emb|CBH41049.1| Peptide chain release factor 1 [Mycoplasma agalactiae]
          Length = 358

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 171/343 (49%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                Q    L  K +DP +  N+ E   + +E   +          ++ L D      +
Sbjct: 9   LSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILKDVEQAKIM 68

Query: 76  A--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132
                E++    +   D       E+E +    +L   E D  +  +E+   AGG E+  
Sbjct: 69  LESKSEEEVEFAKMIIDENSLKLEELEERLKILILPQDENDDKNIIVEIRGAAGGDEANI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++A++  F+ + L  +     G       IKG  AY   K E GVHR+ R
Sbjct: 129 FAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P +DDS+EIEI  SD +ID +R+SGAGGQ VNTTDSAVRI
Sbjct: 189 VPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+QK+ E  +             +I
Sbjct: 249 THLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHGDRSEKI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R +   +    +++G L   + A LA ++
Sbjct: 309 RTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQ 349


>gi|303237122|ref|ZP_07323692.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
 gi|302482509|gb|EFL45534.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
          Length = 370

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LDGLEARFLEVSTLITDPDVISDQQRYVKLTKEYKDLGDIMDARKRYIKCLTTISEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     L   +  +       +   +     D  +  +E+ AGAGG E+ 
Sbjct: 71  LTNETDQEMKEMARLELSENEELLPNLEEEIKLLLVPKDPEDDKNVQMEIRAGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  +  MY R+ +K+ +      + +G   G K     + G   YG LK E GVHR+ 
Sbjct: 131 LFAGDIFNMYKRYCDKKGWNLSITSVSEGTVGGFKEIDFAVAGTGVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   D+  R  TS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPSTDTQGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG V    ++C + R Q KNK +A + LR  +Y+ E QK   +IA+  +S 
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVNDIASRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R           ++GD+ D + A    +
Sbjct: 310 VSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLPGFMNGDIQDMIDALTVAE 360


>gi|311743960|ref|ZP_07717766.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
 gi|311313090|gb|EFQ83001.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
          Length = 353

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 180/348 (51%), Gaps = 18/348 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V   + L  K  DP +  + ++AK + +    L   I   +E Q    D   
Sbjct: 1   MFDAVETLVAEHAELERKMADPSVHADPVQAKRIGQRYAELTAVIRTYREWQQTGDDLQA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL +++D   +     +  +R++  +       +     D+ D  LE+  G GG ES 
Sbjct: 61  ARELRMDDDVVQLEARLPELGERLQRLL-------VPRDPGDAKDVILEIKGGEGGEESA 113

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGE 184
            +A  LLRMYTR+AE+R ++ + L+  +    G KS T  +K       G      LK E
Sbjct: 114 LFAADLLRMYTRFAERRGWRVDILDSTESALGGYKSVTAAVKARSTPEPGEAPGALLKFE 173

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +++EI +SD RID YR+SG GGQ VN
Sbjct: 174 GGVHRVQRVPVTESQGRIHTSAAGVLVLPEA-EDVDVEIHDSDLRIDVYRSSGPGGQSVN 232

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LRA+L E      +  A+    S+ 
Sbjct: 233 TTDSAVRITHVPTGVVASCQNEKSQLQNKEQALRILRARLLEAAQATADAEASDARRSQI 292

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +    ++R+Y   P   + D RT  +  +   V+DG L+D + + +
Sbjct: 293 RTVDRSERVRTYNF-PENRISDHRTGFKAYNLDAVMDGGLEDVIGSLV 339


>gi|150021273|ref|YP_001306627.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
 gi|149793794|gb|ABR31242.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
          Length = 358

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 128/341 (37%), Positives = 182/341 (53%), Gaps = 14/341 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + + L FL  K           E K    +   +   +   K+  +   +  +  E  
Sbjct: 12  EWSTKTLKFLEEKLSSQLT---PEEIKKYSEKYSKMKEIVELSKKYLELEEEIELWKEEM 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E        E      + +  ++      L   E    + +LE+ AG GG E+  +A  
Sbjct: 69  PE----GFENEIEKLSDQQRKIMQELITLVLPKNEYSGKNVFLEIRAGTGGEEAALFAAD 124

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+ EK+ FK E ++ +  +  G K   + IKG N    LK E GVHR+ R+   
Sbjct: 125 LLRMYLRYVEKKNFKAEIVDENKTDLGGYKEVVVRIKGKNVGNLLKYESGVHRVQRVPTT 184

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P V  ++EIEI+ SD RIDTYRASGAGGQ+VN T+SAVRITHIP
Sbjct: 185 ESGGRIHTSTATVAVLPEVS-NVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIP 243

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIR 313
           TG+VV CQ ERSQ +NK QA N+LRA+LY+L+L   E+   I  + K++IG G    +IR
Sbjct: 244 TGIVVTCQSERSQLQNKEQAMNILRARLYKLKL--EEQAKKISSNRKSQIGTGERSEKIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R N    +   VLDG+LD+F+   + I 
Sbjct: 302 TYNF-PQNRVTDHRINYTSYNLQAVLDGELDEFITRLMRID 341


>gi|71893491|ref|YP_278937.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae J]
 gi|119361562|sp|Q4AAJ5|RF1_MYCHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71851618|gb|AAZ44226.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae J]
          Length = 361

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 170/342 (49%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              Q+   L    E   +  +  +   + +E   +   I   ++  D          + +
Sbjct: 11  KIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTILI 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +EDD  ++Q     +  +   +E  +       L   + D  D  +E+   AGG E+  +
Sbjct: 71  QEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L +MY +WA+ +K K + L        G       I G   Y  LK E GVHR+ R+
Sbjct: 131 VGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRIT
Sbjct: 191 PATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRIT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ  NK  A  +L++K+Y LELQK+++  +             +IR
Sbjct: 251 HIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N   +    ++ G L+  ++A LA +K
Sbjct: 311 TYNY-PQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEK 350


>gi|72080478|ref|YP_287536.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 7448]
 gi|119361561|sp|Q4A8M6|RF1_MYCH7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71913602|gb|AAZ53513.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae 7448]
          Length = 361

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 170/342 (49%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              Q+   L    E   +  +  +   + +E   +   I   ++  D          + +
Sbjct: 11  KIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVLEDAKTILI 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +EDD  ++Q     +  +   +E  +       L   + D  D  +E+   AGG E+  +
Sbjct: 71  QEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L +MY +WA+ +K K + L        G       I G   Y  LK E GVHR+ R+
Sbjct: 131 VGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRIT
Sbjct: 191 PATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRIT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV  Q ERSQ  NK  A  +L++K+Y LELQK+++  +             +IR
Sbjct: 251 HIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N   +    ++ G L+  ++A LA +K
Sbjct: 311 TYNY-PQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEK 350


>gi|254465069|ref|ZP_05078480.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
 gi|206685977|gb|EDZ46459.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
          Length = 351

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 115/311 (36%), Positives = 164/311 (52%), Gaps = 5/311 (1%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY-K 102
            L +E   L      +   +    D      +  + D   +  E    L+    E E+  
Sbjct: 32  ALAKEYSDLRPVAEQVAAYRKLQSDLREAELMLADPDMKELAAEEIPALKAAIPEAEHAL 91

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L    ADS  A LE+  G GG E+  +A  LLRMY R+AE + +K + +E    E 
Sbjct: 92  QLALLPKDAADSRPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEGQGWKFDIIEEQMTEL 151

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            GIK     IKG N +  LK E GVHR+ R+   +S  R HTS +++ V P   + ++I 
Sbjct: 152 GGIKEVVAHIKGDNVFARLKYESGVHRVQRVPATESGGRIHTSAATVAVLPEA-EDVDIH 210

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  +D RIDT RASGAGGQHVNTTDSAVRITH+PTG++V    E+SQH+N+  A  +L+ 
Sbjct: 211 IDANDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIVTSS-EKSQHRNREIAMQVLKT 269

Query: 283 KLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +LY+LE Q+ +   +   +S+   G    +IR+Y   P   + D R N+       V+ G
Sbjct: 270 RLYDLERQRIDSERSADRASQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDQVMGG 328

Query: 342 DLDDFMKATLA 352
           DLD+ + A  A
Sbjct: 329 DLDEIIDALTA 339


>gi|119952993|ref|YP_945202.1| peptide chain release factor 1 [Borrelia turicatae 91E135]
 gi|254790864|sp|A1QYZ0|RF1_BORT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119861764|gb|AAX17532.1| bacterial peptide chain release factor 1 [Borrelia turicatae
           91E135]
          Length = 357

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 121/329 (36%), Positives = 190/329 (57%), Gaps = 7/329 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              ++  L  K +D +L +N  E   +++E  +L+       E ++ +       ++  E
Sbjct: 9   IESKIKILEEKLQDTNLIKNQKEYAKVIKEYNYLEKIKEKKDEYENIISQIDENQKILSE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E++  + +     L  + L+ +  +       L   E D+ +  +E+ AG GG E+  +A
Sbjct: 69  EENLEMKELIKQELTHLNLKKDEIEHTIKILLLHQDENDNKNIIIEIRAGTGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG   +  LK E GVHR+ R+ 
Sbjct: 129 HNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKEVFKKLKHESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +SN R  TS +++ V P V+++ +IEI+E D RID YR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 ITESNGRLQTSAATVAVLPEVEET-DIEINEKDLRIDVYRSSGAGGQHVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+VVQCQ ERSQHKNK QA  +LRA+LY+ E L+K+E+ +N  +          +IR
Sbjct: 248 LPTGIVVQCQNERSQHKNKDQAMKILRARLYKFEDLKKQEQRSNDRKQQVGSGDRSERIR 307

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +Y   P   V + R NI      +++ G+
Sbjct: 308 TYNF-PQNRVTEHRANISLYKLEEIMQGE 335


>gi|24212814|ref|NP_710295.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45656013|ref|YP_000099.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|32171561|sp|Q8F9S6|RF1_LEPIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59798055|sp|Q72W38|RF1_LEPIC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24193465|gb|AAN47313.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45599246|gb|AAS68736.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 354

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 171/340 (50%), Gaps = 10/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   ++ +       ++    K L +ER  L      ++E      D     EL
Sbjct: 5   LEKIQEKYLRISEELNQ---AKDPSSLKNLYKERSRLTPLYLKVEEYLKIYKDRKDAEEL 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +     + ++   L++E      +   L        +  +E+ AG GG E+ 
Sbjct: 62  IQSEKDEEMHSMLKEEIREANLKLETLEREFEILLLPPDPNSGKNILVEIRAGTGGEEAG 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY+++A+K+K KTE ++       G+K     ++   AY   K E G HR+ 
Sbjct: 122 LFVADLFRMYSKFADKQKIKTEIIDSSPTGIGGLKEIIFALEDDRAYDLFKFEGGTHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   D  E++I+ESD RID YR+SGAGGQHVNTTDSAVR
Sbjct: 182 RIPSTESGGRIHTSAVTVAVLPEA-DEEEVQINESDLRIDVYRSSGAGGQHVNTTDSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITHIPTGVVV CQ E+SQHKNKA+A  +L A++ E +   K++    I +          
Sbjct: 241 ITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQAEDKKQASDAIKKQMIGSGDRSE 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++R+Y   P     D R      + S +++GDLD+ + A 
Sbjct: 301 RVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLDELIGAL 339


>gi|159904190|ref|YP_001551534.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9211]
 gi|238687119|sp|A9BCL8|RF1_PROM4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|159889366|gb|ABX09580.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9211]
          Length = 365

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 174/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   +++ +   + L + ++
Sbjct: 10  LETARSSFQNLELQLADPDVASDPKRLETIARERARLEPLVLDYEKLLEIEEELLEVKDV 69

Query: 76  ALEED-DCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  + +   D +++++L     +       L     D     LE+ AGAGG E+
Sbjct: 70  LRESKSDKDLEELAQDEMRKLELFKTNLINQLTLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +    +   D +  G +   + +KG + +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISVKGDSVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVQLDPGDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL E+E+   E  A    +   ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLEMEI--AEANAKERSARLAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  I      +VL+G+LD+ + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGI-NFPLENVLEGELDNLIGACIAEEQ 352


>gi|238650227|ref|YP_002916078.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
 gi|259585243|sp|C4K0C9|RF1_RICPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238624325|gb|ACR47031.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
          Length = 355

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 183/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L        +  +  E     +E   L++ ++ IKE      +       
Sbjct: 7   LAKILDKYENLGNTLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+A  +LRA++Y E   +K +E A+            
Sbjct: 243 RITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|241206502|ref|YP_002977598.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860392|gb|ACS58059.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 359

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRVYEKAVAELADLETLL 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +   D  + +     L  +K ++E      Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDRSVDREMRELAELELPEVKEQIEVLEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|306842976|ref|ZP_07475610.1| peptide chain release factor 1 [Brucella sp. BO2]
 gi|306286904|gb|EFM58429.1| peptide chain release factor 1 [Brucella sp. BO2]
          Length = 315

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/303 (36%), Positives = 168/303 (55%), Gaps = 9/303 (2%)

Query: 56  ISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSG 110
           +  I+E+ D   +   L  +  +   D  +     + L  ++  +    +  Q   L   
Sbjct: 2   VGKIRELSDARKEASDLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKD 61

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
            AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E +   +G+  G K    
Sbjct: 62  VADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 121

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G   +  LK E GVHR+ R+   ++  R HTS +++ V P   + I+IEI   D RI
Sbjct: 122 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRI 180

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E Q
Sbjct: 181 DTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQ 239

Query: 291 KREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           K E   +    S+   G    +IR+Y   P   V D R N+       V++GDLD+ + A
Sbjct: 240 KAESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDA 298

Query: 350 TLA 352
            ++
Sbjct: 299 LIS 301


>gi|34557214|ref|NP_907029.1| peptide chain release factor 1 [Wolinella succinogenes DSM 1740]
 gi|46576699|sp|Q7M9M4|RF1_WOLSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34482930|emb|CAE09929.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Wolinella succinogenes]
          Length = 355

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/337 (30%), Positives = 169/337 (50%), Gaps = 9/337 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   +        +  ++     L +E+  L+  +   KE             L  +++
Sbjct: 11  ERFEEITRLLGTMEVISDIKRMTELSKEQSALEALVLKAKEYLQTHRSIQENRALFEDKE 70

Query: 81  DCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E +  L+     +E + +   +     D  + YLE+ AG GG E+  +   L +
Sbjct: 71  LGDLAKEENKLLEESLESLESEIKLLLIPKDPNDDKNIYLEIRAGTGGDEAGIFVGDLFK 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+A+ + +K E +   +    G K    LIKG   Y  LK E G HR+ R+   +S 
Sbjct: 131 SYCRYADLKGWKVEIISSSENSVGGYKEVIALIKGNGVYSRLKYEGGTHRVQRVPETESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P V D +E+ I+ +D +ID +R+ G GGQ VNTTDSAVRITH+PTG+
Sbjct: 191 GRIHTSAITVAIMPEV-DDVEVNINPNDLKIDVFRSGGHGGQSVNTTDSAVRITHLPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            V  Q E+SQHKNK +A  +L+A+LYE EL    +++    + K ++G G    +IR+Y 
Sbjct: 250 SVSMQDEKSQHKNKDKALKILKARLYEAEL--EAKLSENSAARKLQVGSGDRSERIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             P   + D R  +   S  +++  G+ D  +   +A
Sbjct: 308 Y-PQNRLTDHRIGLTLYSLEEIMLSGNFDQVVDPIVA 343


>gi|242069313|ref|XP_002449933.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
 gi|241935776|gb|EES08921.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
          Length = 412

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 180/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A +    ++ +  DP +  +  E + L +    LD  ++  ++ +D          L
Sbjct: 54  LDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVSELDQVVTTYRQFKDCERQLEETKAL 113

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS----NDAYLEVHAGAGGTES 130
             E EDD  + +  +  L+ +  ++   + +  L           +  LEV AGAGG E+
Sbjct: 114 EKENEDDPDMSEMITSELEALSNQLAELEEKLKLLLLPSDPLDSRNILLEVRAGAGGDEA 173

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++ E+  +K + +   + +  G K+  + +KG   Y  LK E GVHR+
Sbjct: 174 GIWAGDLVRMYQKYCERNNWKFKPVSCSEADMGGYKTYVMEVKGKQVYSKLKFESGVHRV 233

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 234 QRVPLTETMGRVHTSTATVAIMPEA-DEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 292

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE++L  RE+  +I    K ++G G 
Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKL--REQQESIRNQRKMQVGTGA 350

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +     +  L GD++  +++   +++
Sbjct: 351 RSEKIRTYNYKD-NRVTDHRLKM-NYELTGFLLGDIESAVQSCATLEQ 396


>gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 prfa [Rhodococcus equi 103S]
 gi|325673529|ref|ZP_08153220.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
 gi|311888505|emb|CBH47817.1| peptide chain release factor 1 PrfA [Rhodococcus equi 103S]
 gi|325555550|gb|EGD25221.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
          Length = 359

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 176/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+   +    L   ++   +++    D     EL
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPVMATYAKLKSAQDDLDAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
           A +    +        L+    E++    + L      D +D  LE+ +G GG ES  +A
Sbjct: 70  AAD---DAAFAAEIPALEETVTELDKTLTDLLAPRDPHDGDDVVLELKSGEGGEESALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHR 189
           + L RMY R+AE+  ++ E L+    +  G K AT+ IK         +  LK E GVHR
Sbjct: 127 SDLARMYVRYAERAGWRVEILDATVSDLGGYKDATISIKSKGDVRDGVWSRLKFEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +  
Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VLDGD++  + A     +
Sbjct: 307 SERIRTYNF-PENRITDHRIGFKAHNLDAVLDGDMEALLDALGKADR 352


>gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
 gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
          Length = 388

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 177/345 (51%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +  +  +P +  +      L +    L + +S    +     D     +L
Sbjct: 36  IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 95

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           A E  D   +QE      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 96  ANE--DPVFVQEAER--LRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 151

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 152 AADLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRV 211

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  +D R+D YR+SG GGQ VNTTDSAV
Sbjct: 212 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAV 270

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+VV CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 271 RLTHLPTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 330

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL + + A  A +
Sbjct: 331 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 374


>gi|116254019|ref|YP_769857.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|119361588|sp|Q1MBB2|RF1_RHIL3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115258667|emb|CAK09771.1| putative peptide chain release factor 1 [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 359

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRVYEKAVTELADLETLL 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            +   D  +       L  +K ++E  + E     L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGKGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLPEA-EEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|209965909|ref|YP_002298824.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
 gi|209959375|gb|ACJ00012.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
          Length = 360

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 121/337 (35%), Positives = 176/337 (52%), Gaps = 11/337 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   L  +     L           +E   L+   + I E++    D   L  +A E DD
Sbjct: 18  RYDELRDQLASGTLSG--EVFVRSSQEYAELEPVATAIAELRRARADMADLQAMA-EGDD 74

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANML 137
             +     D L      +   +   +L      EAD  +A LEV AG GG E+  +A  L
Sbjct: 75  AEMATLARDELVEADRRIPELERRIMLALLPKDEADEKNAILEVRAGTGGDEAALFAAEL 134

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
             MY R+A  + ++ E +E+++    G K A+  I G N +  LK E GVHR+ R+   +
Sbjct: 135 FEMYRRYAGIQGWRFETIEVNETGLGGYKEASASITGRNVFRRLKFESGVHRVQRVPETE 194

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS +++ V P   + ++I I E D RID +R+ G+GGQ VNTTDSAVRITH+PT
Sbjct: 195 AGGRIHTSAATVAVLPEA-EEVDIHIEEKDLRIDVFRSQGSGGQSVNTTDSAVRITHLPT 253

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYV 316
            +VVQCQ E+SQHKNKA+A  +LRA+LYE+E Q+R+ E A    +         +IR+Y 
Sbjct: 254 NIVVQCQDEKSQHKNKAKALKVLRARLYEIERQRRDSERAASRRTQVGSGDRSERIRTYN 313

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             P   V D R N+       V+ G+ LD+ + A +A
Sbjct: 314 F-PQGRVTDHRINLTLYKIDKVMAGEALDELVDALVA 349


>gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
 gi|119361566|sp|Q2GE03|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
          Length = 367

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 192/354 (54%), Gaps = 14/354 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++ L G+   +  + R ++L  +   P    +      L +E   L   +  I   + +L
Sbjct: 1   MDNLWGVL--EEILNRHTYLADRLRCPEAIASQE-FSKLSKEYAELKPKVELIARYK-KL 56

Query: 67  CDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLE 120
            +    LEL ++   +D  I +    +LQ I+  +   + E     L   + D+ +  LE
Sbjct: 57  KEEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVIPKLELEIKRMLLPKDKDDALNVMLE 116

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V AG GG E+  +A  L  MY ++AE+ K++ E + I   E  G K A   I G + +  
Sbjct: 117 VRAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSDVFAK 176

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   +S  R HTS +++ V P   + ++++I++ D RID YR+SG GG
Sbjct: 177 LKFESGVHRVQRVPETESAGRIHTSTATVAVLPEP-EDVDVKINDKDLRIDVYRSSGPGG 235

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIG 299
           Q VNTTDSAVRITHIPTG+VV  Q E+SQHKN+A+A  +LR +LYE+E  K ++EI+++ 
Sbjct: 236 QSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAKAMKVLRVRLYEIERNKVQQEISSMR 295

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD-VLDGDLDDFMKATLA 352
           +S         + R+Y   P   + D R N+     ++ V +G+L+  ++A + 
Sbjct: 296 KSQIGSGERSEKTRTYNF-PQGRITDHRINLTTYRINETVKEGELEPIIEALIR 348


>gi|288800098|ref|ZP_06405557.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333346|gb|EFC71825.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 369

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 161/352 (45%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T   DP +  +      L +E + L + +   K+    L       ++
Sbjct: 10  LEGLESRFEEVSTLITDPAVIADQNRYVRLTKEYKDLGDIMEARKKYVTCLNVIKEAKDI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  +  +    E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 70  LANETDQDMREIAREELQANEPLLPKLEEEIKIALVPKDPEDAKNVEVEIRAGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY ++ +   +        +G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 LFAGDLFQMYKKYCDSMGWSISITNESEGTMGGFKEIAFSVTGTNVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TG V    ++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  +S 
Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIASRRKSL 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   V D R           + GD+   + A +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVGGDIQAMIDALIVAE 359


>gi|242089427|ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
 gi|241945831|gb|EES18976.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
          Length = 416

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 126/343 (36%), Positives = 188/343 (54%), Gaps = 11/343 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-- 76
             QR ++L  +   P    +  E     +E + L++ +  IKE++ +  +   L  L   
Sbjct: 68  IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKELRSKREEIEGLKSLVTN 125

Query: 77  --LEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D   +  E       ++  ++++ F SLL   EAD  D  LEV AG GG E+  +
Sbjct: 126 AREEKDMREMAAEELLEAVEVEKRLQHELFRSLLPKDEADERDCILEVRAGTGGEEASLF 185

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + RMY ++A+K  +K + ++I +    G K A+  I GP A+G LK E G+HR+ R+
Sbjct: 186 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 245

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ V P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 246 PVTEKSGRVHTSAVSVAVLPQA-DEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 304

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           HIPTG VV  Q ERSQH NKA+A  +LRA+LYELE  +   + + +            +I
Sbjct: 305 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERHRLHMDRSKLRSEQIGSGDRSERI 364

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           R+Y   P   V D R  I   S +DV++G+ LD F+ A L  +
Sbjct: 365 RTYNF-PQGRVTDHRVGITHHSIADVMEGESLDVFVDALLLQE 406


>gi|255262532|ref|ZP_05341874.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
 gi|255104867|gb|EET47541.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
          Length = 351

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 172/339 (50%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R  FL  K           +   L +E   L   I  I E Q    D      +
Sbjct: 7   LEQILGRFQFLEAKMASGDA---ADDIAALAKEYSDLRPVIDVITEYQTLEADLAEAELM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+    E+E   Q   L    AD+  A +E+  G GG E+  +A
Sbjct: 64  MSDPDMKELAEEELPMLRARLPEIEQNLQIALLPKDAADARPAMIEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E    E  GIK  T  +KG   +  +K E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWTFEIIEEQSTELGGIKEVTAHVKGEGVFARMKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I   D RIDT RASG+GGQHVNTTDSAVRITH
Sbjct: 184 TTESGGRIHTSAATVAVLPEA-EDVDIQIDPGDLRIDTMRASGSGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313
           IP+G+VV    E+SQH+N+  A   L+ +LY+ E Q+ +   +   +++   G    +IR
Sbjct: 243 IPSGIVVVSS-EKSQHRNREIAMLTLKTRLYDAERQRVDGERSADRAAQIGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +Y   P   + D R N+       V+ GDLD+ ++A  A
Sbjct: 302 TYNF-PQGRMTDHRINLTLYKLDQVMQGDLDETIEALTA 339


>gi|57504876|ref|ZP_00370851.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|305432416|ref|ZP_07401578.1| peptide chain release factor RF1 [Campylobacter coli JV20]
 gi|57019304|gb|EAL56006.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|304444455|gb|EFM37106.1| peptide chain release factor RF1 [Campylobacter coli JV20]
          Length = 355

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 181/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L        L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIISDISKMTALSKEQKNLEPIVLKAKEYLKTLDSIEENKTL 65

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  + +   + L+          E  +   L     D  + +LE+ AG GG E+ 
Sbjct: 66  L---NDAELGELAKEELKNLEELKPKLEEELKILLLPKDPNDERNIFLEIRAGTGGDEAS 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+AE R +K E +   +G   G K   +L+KG  A+  LK E G HR+ 
Sbjct: 123 LFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGAGAFSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  +I V P V D IEIEI+ +D +ID  R+SG GGQ VNTTDSAVR
Sbjct: 183 RVPQTESQGRIHTSAITIAVMPEV-DDIEIEINPNDLKIDVMRSSGHGGQSVNTTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q  +SQHKNK  A  +L+A+LYE++  +R  +A   E+ K+++G G  
Sbjct: 242 ITHLPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESER--LAQESEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +L DG  D+ ++  +A
Sbjct: 300 SERIRTYNF-PQNRISDHRINLTLYRLDAILQDGLFDEVIEPLIA 343


>gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
 gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
          Length = 355

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 173/343 (50%), Gaps = 10/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             + R   L        +  +        +E   + + I  +K     + D     ++  
Sbjct: 9   EIISRYETLEKTLSQTDI--DKNTYVKNSKEYSSIGDIIIDVKNYIKMVEDKEGSEKILE 66

Query: 78  E-EDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQD 132
           +   D  + +     L  IK ++   + +     L   EAD  +A +E+ AG GG E+  
Sbjct: 67  DKSADKELKEMAELELNEIKEKIGDLETKIKIFMLPKDEADEKNAIIEIRAGTGGLEASL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L  MY + A    +KTE + I D +  G K     + G N +  LK E GVHR+ R
Sbjct: 127 FAGDLFEMYQKVASNNGWKTEIISISDSDAGGYKEVVFSVTGKNVFSKLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + ++++I E++ RID +R+SG GGQ VNTTDSAVRI
Sbjct: 187 VPKTETQGRVHTSAATVAVLPEA-EDVDVKIDENELRIDVFRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           THIP+G+VV  Q E+SQHKNKA+A  +LR+KLYELE  K E+  +    S+   G    +
Sbjct: 246 THIPSGIVVSQQDEKSQHKNKAKALKILRSKLYELERSKLEKERSSARKSQIGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   V D R N+     SD L GD+   +   L I+
Sbjct: 306 IRTYNF-PQGRVTDHRINLTLHKLSDFLSGDVFSEISDALQIQ 347


>gi|218263804|ref|ZP_03477780.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222477|gb|EEC95127.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
          Length = 369

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 16/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP++  +      L +E + L+  I   KE    L        L
Sbjct: 11  LEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEAR-L 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            + E D  + +   +     +  +    E  +   + +   D  +A +E+  G GG E+ 
Sbjct: 70  MMAETDPEMKEIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 LFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEA-DEFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +      TGV     ++C + R Q KNK +A   LR+ +Y+ E QK  ++IAN  ++ 
Sbjct: 249 LRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIANKRKTM 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + S  +DGD+   +   +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAE 359


>gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 357

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 10/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V R + L +      +  +  E     +E   +   I  IK   D + D   L ++
Sbjct: 7   LESIVNRYNDLESSLSKTDI--DKKEFVKNSKEYSSIGEIIETIKSYIDAIKDKEDLKKI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTES 130
             ++D D  I +    +L+ IK + +  + +     L   EAD  +A +E+ AG GG E+
Sbjct: 65  LSDKDSDIEIREMAEHDLEEIKSKEQEYEKKVKVFLLPKDEADEKNAIVEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L  MY + +    ++ E L +   E  G K     I G N +  LK E GVHR+
Sbjct: 125 SLFASDLFNMYQKVSSINGWRVEVLSVSASEAGGYKEIVFTITGKNVFSKLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V     + ++++I E+D RID +R+ G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLAEA-EEVDVKIDENDLRIDVFRSGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTGVVV  Q E+SQHKNKA+A  +LR++LYE E  + E   ++   S+   G   
Sbjct: 244 RITHIPTGVVVAIQDEKSQHKNKAKAMTILRSRLYEAERLRLENERSVARKSQIGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            +IR+Y   P   V D R N+     +  L GD
Sbjct: 304 ERIRTYNF-PQGRVSDHRINLTLHKLTGFLAGD 335


>gi|289706369|ref|ZP_06502727.1| peptide chain release factor 1 [Micrococcus luteus SK58]
 gi|289556864|gb|EFD50197.1| peptide chain release factor 1 [Micrococcus luteus SK58]
          Length = 369

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 171/348 (49%), Gaps = 10/348 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +     L  +  DP + Q+   A+ L R    L   ++  +     + +     EL
Sbjct: 11  VDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAAVEELADAREL 70

Query: 76  ALEEDDCSILQ--ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           A   DD +     E            E  +   +     D+ D  LE+  G GG E+  +
Sbjct: 71  AAAGDDDAAAFAAEVPGLEAAEAEAAERLRRLLIPRDPDDARDVILEIKGGEGGEEAALF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGV 187
           A  LLRMY R+AE R +KTE L     +  G K   + ++G         Y  LK E GV
Sbjct: 131 AGDLLRMYLRYAESRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPADGVYARLKFEGGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P VD   E+ +  +D ++D +R+SG GGQ VNTTD
Sbjct: 191 HRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFRSSGPGGQSVNTTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVR+TH+PTG+VV  Q E+SQ +N+  A  +LR++L E +  +++   +   +++   +
Sbjct: 251 SAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDAEDSAARAAQVRTM 310

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   + D RT  +  +   VLDGDL+  + + LA+ 
Sbjct: 311 DRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357


>gi|86570230|gb|ABD04787.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris HaA2]
          Length = 373

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 105/339 (30%), Positives = 168/339 (49%), Gaps = 6/339 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +        + +     + E   L  A+   +E++D L D   LLE 
Sbjct: 21  LDVLLAHHASLEAQLLGEVAANDYVRITRELSELNPLVEAVKAYREVRDELGDIDDLLED 80

Query: 76  ALEEDDCSILQETSDNLQRIKLE--VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              + +   + E   +      E  ++  +   L     D  +  LE+ AG GG E+  +
Sbjct: 81  PATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGTGGDEASLF 140

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+ R+
Sbjct: 141 AGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRVQRV 200

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P V + ++++I   D +IDT RA GAGGQHVN T+SA+RIT
Sbjct: 201 PDTETQGRIHTSAATVAVLPEV-EEVDVDIKPDDLKIDTMRAQGAGGQHVNKTESAIRIT 259

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQI 312
           H+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +   +   +          +I
Sbjct: 260 HLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSARSAERKQKVGSGDRSERI 319

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
           R+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 320 RTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 357


>gi|281425822|ref|ZP_06256735.1| peptide chain release factor 1 [Prevotella oris F0302]
 gi|281400083|gb|EFB30914.1| peptide chain release factor 1 [Prevotella oris F0302]
          Length = 370

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 165/353 (46%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + ++  K     L       ++
Sbjct: 11  LDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIREAKDI 70

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130
              E D  +     + LQ    ++ ++E  + + LL      D+ +  +E+ AG GG E+
Sbjct: 71  LANESDSDMKDMAREELQQNETLQPQLEE-EIKLLLIPKEPEDAKNVQMEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+ + + +     ++ +G   G K     I G + YG +K E GVHR+
Sbjct: 130 ALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +SN R  TS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S V
Sbjct: 190 QRVPVTESNGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGV 248

Query: 251 RITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301
           R+ +      TG V    ++C + R Q KNK +A + L   +++ E QK  ++IA+  +S
Sbjct: 249 RLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKYVDDIASRRKS 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +      +IR+Y   P   V D R           L G++ D + A    +
Sbjct: 309 LVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAE 360


>gi|162447071|ref|YP_001620203.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
 gi|226739094|sp|A9NEP7|RF1_ACHLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161985178|gb|ABX80827.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
          Length = 354

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 170/343 (49%), Gaps = 13/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +    L  K        +V E   LM+E + L++A+   ++          L EL
Sbjct: 5   LEVMRKTYYALQEKLASG--ISDVKEITKLMKELKSLEDAVVAYEKYLSLKEQLKDLEEL 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E + S+L+      + ++ ++E  +       L     D  +  +E+   AGG E  
Sbjct: 63  LELETESSVLEMAKAEEKSLESDIENLEESLRILLLPKDPDDDKNVIIEIKGAAGGDEGN 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY+++AE   +K   +    G   G      +I G NA+ +LK E GVHR+ 
Sbjct: 123 IFAGDLFKMYSKYAESMGWKVTLVNTTPGSSGGFAGIEFIISGENAFSYLKHESGVHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + +   P   + IE ++   D R DTY +SGAGGQ VNTT SAVR
Sbjct: 183 RVPETESQGRIHTSTAVVLALPE-QEDIEYDVKWEDIRFDTYNSSGAGGQSVNTTYSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPT VVV  Q+ERSQH NK +A+ +L  ++Y+    ++E++   GES K  IG G  
Sbjct: 242 LTHIPTNVVVTSQEERSQHANKDRAYKLLVTRIYD--KIQQEQLEKEGESRKALIGRGNR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       +++G +D  ++  +
Sbjct: 300 SEKIRTYNY-PQNRVTDHRIGLTINRLDAIMEGRIDLIIEPLI 341


>gi|241116888|ref|XP_002401657.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215493201|gb|EEC02842.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 358

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 185/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L + ++ IKE      +       
Sbjct: 10  LAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELKDVVAKIKEYNKAKSELEEANNF 66

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 67  KLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+ LIKG + +  LK E GVHR+
Sbjct: 127 ALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D +IDTYRASGAGGQHVNTTDSAV
Sbjct: 187 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLKIDTYRASGAGGQHVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWG 309
           RITHIPT + V  Q E+SQHKNKA+A  +LRA++YE E +K+E+  A+            
Sbjct: 246 RITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 306 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 348


>gi|296116158|ref|ZP_06834776.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977264|gb|EFG84024.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 353

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 171/349 (48%), Gaps = 21/349 (6%)

Query: 12  GLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRL 66
             FD   D  V R   L     +  L           RE   LD  ++ +  +   +  +
Sbjct: 2   ARFDERLDRIVARGEELQALLAE-GLSG--AAFSQASREFAELDPIVAKVNALRATEQAV 58

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVH 122
            D   LL      DD  +       L  ++  +   + +     L   EAD   A LE+ 
Sbjct: 59  QDTQALL------DDPEMRGLAESELAELRRRIPELEHDIRIAMLPRDEADDRSAILEIR 112

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+  +A  +   Y R+A++R ++ E LE  + E  G++     I G   +  LK
Sbjct: 113 PAAGGDEAALFAGQMFGAYQRYADQRGWRFEILEYDESELGGLREGIASITGRGVFARLK 172

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS  ++ V P   + +++EI+++D RID YRASGAGGQH
Sbjct: 173 YESGVHRVQRVPATESQGRIHTSTVTVAVLPEA-EEVDVEINDNDLRIDVYRASGAGGQH 231

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LYE       E       S
Sbjct: 232 VNKTESAVRITHMPSGIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAHETRAADRRS 291

Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +   G    +IR+Y   P   V D R  +       V+ G+ D+F+ A 
Sbjct: 292 QVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDKVMGGEFDEFVDAL 339


>gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_05I22]
          Length = 334

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 114/331 (34%), Positives = 168/331 (50%), Gaps = 13/331 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILL 73
           D  ++R   + TK               L RE   L      I  ++ ++  L D + ++
Sbjct: 8   DKVLERRQEVETKLSRSAELS-SKALADLSRELSELRPVCEQIELVRALESELKDAITMV 66

Query: 74  ELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
                  D  +       +    +RI +E E  Q   L   + DS +A LEV AG GG E
Sbjct: 67  --VEAAGDDEMQAMAEAEVTLLKERIPIEKERLQLLLLPKDKDDSRNAILEVRAGTGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR
Sbjct: 125 AALFGANLFSMYQRFAAKNGWRFEVMEVSETGIGGYKEATATISGIDVFARLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + ++I+I E+D RID +R+SG GGQ VNTTDSA
Sbjct: 185 VQRVPETEAGGRIHTSAATVAVLPEA-EEVDIDIDENDLRIDVFRSSGPGGQSVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           VRITH+PTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + E E A   +        
Sbjct: 244 VRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVESERAAARKGQVGSGDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             +IR+Y   P   V D R N+       V+
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDRVM 333


>gi|220963008|gb|ACL94364.1| bacterial peptide chain Release factor 1 (RF-1) [Caulobacter
           crescentus NA1000]
          Length = 335

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 114/321 (35%), Positives = 174/321 (54%), Gaps = 6/321 (1%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E   L +E   L      ++ +     +   L  +A + +   ++++    L     
Sbjct: 6   DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVMASDPEMAEMVRDEIQALDEKLP 65

Query: 98  EVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
            +E +    L   + D N  A LEV AG GG E+  +A  L RMY R+A+ + ++ E   
Sbjct: 66  VMERELALMLAPKDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQTQGWRVEIDS 125

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I +GE  G K     I G   +G LK E GVHR+ R+   ++  R HTS +++ V P   
Sbjct: 126 ISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEA- 184

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH+PTGVVV    E+SQH+N+A+A
Sbjct: 185 EDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSS-EKSQHQNRARA 243

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
              L+A+LY+++ +  +   +    S+   G    +IR+Y   P   V D R N+   + 
Sbjct: 244 MKNLKARLYDMQREALDSARSEARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYNL 302

Query: 336 SDVLDGD-LDDFMKATLAIKK 355
           + +++GD LDD +   +A  +
Sbjct: 303 ARIMEGDALDDVINPLIAEDQ 323


>gi|193216649|ref|YP_001999891.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
 gi|226739117|sp|B3PMD5|RF1_MYCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193001972|gb|ACF07187.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
          Length = 355

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 170/342 (49%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +  ++   L  +     ++ ++ +   + +E   +++                +  E+  
Sbjct: 7   SIKEKYELLAQELTKLEIFNDIKKYTKIQKEHASIEDIAIAFINYLAAESSYNLSKEILQ 66

Query: 78  EEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            E D  ++    +++      ++   +  +   L   E D+ +  +E+   AGG E   +
Sbjct: 67  NEKDEELIALAKEDIDEQSTLMQKLEQELKELLLPQDENDNKNVIMEIRGAAGGDEGDIF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           +  L +MY ++ E   FK + ++   G   G      ++KG   +  LK E+GVHR+ R+
Sbjct: 127 SGDLFKMYQKFCEANDFKIKIVDSVYGTAGGYSRIVFIVKGEKVFSKLKFERGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P VDD ++IEI   D  +D +R+SGAGGQ VNTTDSAVRIT
Sbjct: 187 PQTETQGRVHTSTATVTVLPEVDDDVKIEIRPEDIEVDVFRSSGAGGQSVNTTDSAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H  TG++V  Q ERSQ  N+  A  +L+AKLYE+E++KREE                +IR
Sbjct: 247 HKKTGIIVTSQDERSQIMNRETALKILKAKLYEIEVKKREEEEQGLRKLAGTGDRSEKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R     +   +V++G+LD  + A +A +K
Sbjct: 307 TYNY-PQDRITDHRIGFSLS-LKNVMEGNLDKIIDALIADEK 346


>gi|12045113|ref|NP_072924.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|255660257|ref|ZP_05405666.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|1350577|sp|P47500|RF1_MYCGE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1045950|gb|AAC71478.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|166078949|gb|ABY79567.1| peptide chain release factor 1 [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 359

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 14/349 (4%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           F+ +  V+    L      P+L     + K++ +E +H    I   KE+Q  + +     
Sbjct: 9   FNVEKIVELTEQLEKDLNKPNLS--FEQIKVINKELKHKQPLIVKFKELQKLVENANEAE 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           ++        + +E    L++IK  +    E  +F  L   E +  +  +E+   AGG E
Sbjct: 67  QILNNSSLKELHEEAKKELEKIKASLPSLEEEIKFLLLPVDENNQKNVIVEIRPAAGGDE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  + + L  MY  +   + +  E  EI      GI   +  + G + +  LK E GVHR
Sbjct: 127 SCIFLSDLFNMYKNYCTSKNWTVELNEIIPASV-GINFVSFAVNGTDVFAKLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS  ++ V P + + +EI I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 186 VQRVPLTEAKGRVHTSTVTVAVLPQL-EEVEITINPSDLRIDTYRASGAGGQHVNRTESA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ+ +SQ  N+ +A  MLRAKL+E    K  +++   +  K+++G G
Sbjct: 245 VRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNK--QLSTQADLRKSQVGSG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R  +     + V+ GDLD+ ++A  A +K
Sbjct: 303 ERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQADEK 350


>gi|313606725|gb|EFR83443.1| peptide chain release factor 1 [Listeria monocytogenes FSL F2-208]
          Length = 309

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 99/296 (33%), Positives = 163/296 (55%), Gaps = 4/296 (1%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSND 116
             K + +++ +   LL   L+++   + +E    LQ+ K ++E   +   +     D  +
Sbjct: 1   EYKNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKN 60

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             LE+   AGG E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +
Sbjct: 61  VILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGND 120

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A+  +K E G HR+ R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++
Sbjct: 121 AFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFAST 179

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI 295
           GAGGQ VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE 
Sbjct: 180 GAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEY 239

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +S+        +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 240 DANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 294


>gi|78211899|ref|YP_380678.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
 gi|119361630|sp|Q3AMQ9|RF1_SYNSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78196358|gb|ABB34123.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
          Length = 365

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 168/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   +E+Q    +     +L
Sbjct: 10  LETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D ++ +   D L  ++ +     E      L     D     LE+ AGAGG E+
Sbjct: 70  LKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++K  +  +++   + +  G +   L ++G + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL E E     E  ++   +        
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRAQVGSGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R      +   VL+G L+D + A +A ++
Sbjct: 309 EKIRTYNYKD-NRTTDHRLG-RNFTLEPVLEGQLEDLIGACIAEEQ 352


>gi|269794320|ref|YP_003313775.1| peptide chain release factor 1 [Sanguibacter keddieii DSM 10542]
 gi|269096505|gb|ACZ20941.1| bacterial peptide chain release factor 1 (bRF-1) [Sanguibacter
           keddieii DSM 10542]
          Length = 361

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 13/344 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +   + +  +  DP +  +   A+ L R    L   ++  +  +  + D       A
Sbjct: 9   EPLLAEHAEIEQQLADPAVHADAARARTLGRRYAELGQVVAAYRGWRSAVDDAEAA---A 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWAN 135
               +     E    LQ    +   K    L+     D  D  LE+ AG GG ES  +A 
Sbjct: 66  ELAAEEPAFAEELPALQTAATDAAEKLRRVLIPRDPDDGRDVILEIKAGEGGEESALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMY R+AE+R +KTE +E  + +  G K   + +K           +  LK E GVH
Sbjct: 126 DLLRMYLRYAERRGWKTEVIEATESDLGGYKDVQVAVKAKGTVAPEDGPWANLKYEGGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V+P V+D+ E+EI ++D RID YR+SG GGQ VNTTDS
Sbjct: 186 RVQRVPVTESQGRIHTSAAGVLVFPEVEDAGELEIDQNDLRIDVYRSSGPGGQSVNTTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIG 307
           AVRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L     ++    AN I  S    + 
Sbjct: 246 AVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEEAAAANDIRRSQVRTVD 305

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VLDGDL+  +++ +
Sbjct: 306 RSERIRTYNY-PENRIADHRTGYKSYNLDQVLDGDLEPVVRSAI 348


>gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 337

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 177/337 (52%), Gaps = 9/337 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  +    L+ L+ +  +  LW +   AK +M +   +   +      +D+L D    L
Sbjct: 1   LDPPSLRAMLADLDKRASEATLWDDPKNAKAVMEQLADVREQLELAAAFEDKLGDARTAL 60

Query: 74  ELALEEDD----CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           E+  ++        +  E SD +  ++  +E  +   LL G  D+  A + ++AG GG +
Sbjct: 61  EMIADDPSSDVVPELASEISDAIASLEAALETWETRRLLVGTYDALGATVFINAGFGGFD 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + +WA  L   Y  WA +R F         GEE G++S TL I G  AYG+L  E+G HR
Sbjct: 121 AHEWAERLESCYVAWARRRGFAVRVEARTPGEEVGLRSVTLEIDGRFAYGYLASEKGAHR 180

Query: 190 LVRISPYDSNSRR--HTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVN 244
           +VRI      + R  H++F ++ V P +++   SI     +    I T R+ GAGGQ+VN
Sbjct: 181 MVRIGGVAGQTPRGRHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
             ++AVR+ H+PTG+VV+C++ERSQ  N+A+A   L+AKL  +  ++R            
Sbjct: 241 KVETAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVV 300

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               G+QIR+YVL PY++VKD+RT +E +    VL G
Sbjct: 301 RAERGQQIRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337


>gi|167842465|gb|ACA03160.1| RF2 [Dictyostelium fasciculatum]
 gi|328868131|gb|EGG16511.1| class I peptide chain release factor [Dictyostelium fasciculatum]
          Length = 425

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 133/349 (38%), Positives = 202/349 (57%), Gaps = 12/349 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +     RL  L     D  L      +  +   L++E  H+   +  I ++  +  D L 
Sbjct: 77  YKKMKIRLKELQP-IHDRSLVDITTIDQNDTGSLLKEYNHIRVQVDQIDQLPVQFKDYLE 135

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+++A    D  ++QE     +++  +    +F+SL+S + D++ AY+E+HAGAGGT+S 
Sbjct: 136 LVKMAKTAGDREMMQEAQSTTEQLMSQCNELEFKSLMSNDMDNDSAYMEIHAGAGGTDSM 195

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  ML  MY +WA +R F  + ++   G+  G K   L I GP AYGW + E GVH+L+
Sbjct: 196 DWTQMLSSMYIKWASRRGFDAQIIDESHGDICGYKKVILKISGPYAYGWTRTENGVHKLI 255

Query: 192 RISPYDSNSRRHTSFSSIWVYP--VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           R+SP+++N +RHTSF+S++VYP    D+ + +++   D  I+T R+SGAGGQH N T+SA
Sbjct: 256 RMSPFNTNGKRHTSFASVFVYPSSDADEKVAVDLVSRDLVIETMRSSGAGGQHTNKTESA 315

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--- 306
           VRITH P+G+ V   QERSQHKNK  A ++L++KL  LEL+KR+E      S +  I   
Sbjct: 316 VRITHTPSGLSVNISQERSQHKNKQIAMDLLKSKLLSLELRKRDEQEKNLRSEQMGINGF 375

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           G G   R Y   P   +KD RT  E ++  + L G  +LD  +K  L+I
Sbjct: 376 GSGSINRVYTQHPQTRIKDQRTGQESSNFEEFLQGGEELDQMIKEVLSI 424


>gi|75674575|ref|YP_316996.1| peptide chain release factor 1 [Nitrobacter winogradskyi Nb-255]
 gi|119361570|sp|Q3SVP7|RF1_NITWN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74419445|gb|ABA03644.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           winogradskyi Nb-255]
          Length = 358

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 166/342 (48%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L ++    H+  +      + RE   L+  +  +K  +    +   +  +
Sbjct: 7   LDLLLARHAALESELLS-HVSAD--RYVQMTRELAELNPIVDAVKNWRAVTAEIAGIDAM 63

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +          ++   +      +   L     D  +  LEV AG GG E+
Sbjct: 64  IADPATDAEMRAMAEAERPALEARNDELMQKIRVALLPKDAMDERNVMLEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  AY  +K E GVHR+
Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQVQGRGAYARMKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I   D RI+T RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTEAQGRVHTSAATVAVLPEA-EEVDVDIRPDDLRIETMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+     +     +   G   
Sbjct: 243 RITHIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQRINAARSADRKDQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+       V+ GD L + + A 
Sbjct: 303 ERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDAL 343


>gi|315122704|ref|YP_004063193.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496106|gb|ADR52705.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 357

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 14/345 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           N   R S +  +  + P +         L  E   +   IS I   + +  +   L  + 
Sbjct: 11  NLKNRFSEIELRMSESPSV----DVYIKLTEEYAAISPIISKIDIYEKKKGEEQDLRTII 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++D D  I       +  ++ E++  ++E     L     D     LE+ AG GG+E+ 
Sbjct: 67  DDQDSDLGIRDLAKAEIGEVEKEIKALEYEISCLLLPKDTDDDKSCILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A  +K+K E L   D ++ G K     I G   +  +K E GVHR+ 
Sbjct: 127 LFVGDLFRMYERYATYQKWKVEILSSSDNDDGGYKEIVATISGNGVFYRMKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I++ I+  D RIDT RASG+GGQHVNTTDSAVR
Sbjct: 187 RVPATEASGRVHTSAATVAVLPEA-EEIDVAIATEDIRIDTMRASGSGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           ITHIPTG++V    E+SQH+N+ QA  +LRA+LY++E ++   E +   ++         
Sbjct: 246 ITHIPTGIMVTSS-EKSQHQNRLQAMKVLRARLYDIERKRMAHERSENRKAQIGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R N+       VL G LD+ + A L   +
Sbjct: 305 RIRTYNF-PQGRITDHRINLTLYKLEYVLQGYLDEIVNALLTAHQ 348


>gi|148272337|ref|YP_001221898.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166223547|sp|A5CQ48|RF1_CLAM3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147830267|emb|CAN01201.1| peptide chain release factor RF-1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 359

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 169/341 (49%), Gaps = 10/341 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++    L  +  DP L  +   ++ + R    L   ++   E      D     ELA 
Sbjct: 7   QLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAARELA- 65

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            E+D +   E     Q +    E  +   +     D+ D  +E+  G GG ES  +A  L
Sbjct: 66  -EEDPAFADEIPGLEQALDAAQEKLRRLLIPRDPDDARDVIMEIKMGEGGAESALFAADL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP------NAYGWLKGEQGVHRLV 191
           LRMY  +AE R++KTE L     +  G K   + IKG         +  LK E GVHR+ 
Sbjct: 125 LRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLKYEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P V++  E+ I  +D +ID YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPATESQGRIHTSAAGVLVIPEVEEVEEVAIDPNDLKIDVYRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +  A+    S+   +    
Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAVRRSQIRTMDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D RT  +  +   V+DG LD  +++ +
Sbjct: 305 RIRTYNF-PENRIADHRTGYKAYNLDAVMDGALDPVVESCI 344


>gi|26553517|ref|NP_757451.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
 gi|32171558|sp|Q8EWY5|RF1_MYCPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26453523|dbj|BAC43855.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
          Length = 359

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 176/344 (51%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++ + LN + E   L   V     + +  +     +   KE +  L D     +L
Sbjct: 11  LLSMEEKFNDLNKELETEGLS--VKRMSEINKSIKETTPIVEKFKEYKRTLNDIDSAEKL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  I++     L   K  +E  ++E     L     D  +  +E+   AGG ES 
Sbjct: 69  IKSEKDNEIIELAQLELSEKKPLIEKYEYELKVLLLPKDPNDDKNVIVEMRPAAGGDESS 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L   Y R+A+   +K + LE+ +    G    + +I G N Y  +K E GVHR+ 
Sbjct: 129 IFVGDLFSAYKRYADSLGWKVKMLEVQESSH-GYGFISFMINGENVYSKMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + + +E+ I+ SD +IDTYRASGAGGQH+N T+SAVR
Sbjct: 188 RVPATESKGRVHTSTITVAVLPEL-EEVELVINNSDLKIDTYRASGAGGQHINKTESAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITHIPTG+ V CQ+ +SQ +N+  A  MLRAKL+  E ++ E   NI +  K ++G G  
Sbjct: 247 ITHIPTGIFVACQEGKSQIENRETAMKMLRAKLW--EKKEEENRKNISDLRKGQVGTGER 304

Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+      +V+ G+L + + + ++
Sbjct: 305 AEKIRTYNY-PQNRVTDHRINLTLNKLDNVMLGNLSEIIDSLIS 347


>gi|239947714|ref|ZP_04699467.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921990|gb|EER22014.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 355

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 124/344 (36%), Positives = 185/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + +   L  K     +  +  E     +E   L + ++ IKE      +       
Sbjct: 7   LAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELKDVVAKIKEYNKAKSELEEANNF 63

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
            LE   D + L+   D +  ++  +   +       L   +ADS  A +EV AG+GG E+
Sbjct: 64  KLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A +L  MY R+AE + ++ E L I D    G K A+ LIKG + +  LK E GVHR+
Sbjct: 124 ALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++I+I + D +IDTYRASGAGGQHVNTTDSAV
Sbjct: 184 QRVPETESQGRIHTSAATVAVLPEA-EEVDIKIEDKDLKIDTYRASGAGGQHVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWG 309
           RITHIPT + V  Q E+SQHKNKA+A  +LRA++YE E +K+E+  A+            
Sbjct: 243 RITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 ERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|256370731|ref|YP_003108556.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009523|gb|ACU52883.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
          Length = 360

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 118/342 (34%), Positives = 206/342 (60%), Gaps = 5/342 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KLS ++  +    +    +  L     K   P  W+N  ++K +++        ++    
Sbjct: 9   KLSNKIKEISISLEIKKKISFLKKEEKKLMSPFFWKNKKQSKKIIKSLSETKKWLNTFNL 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++   D  IL       ++  +  E ++ L++I+  +   + ++    + D+++A L++
Sbjct: 69  LKESFNDLKILFFYFKSGEETEL--EINNLLKKIENLISKIELKNFFFEKEDASNAVLQI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DW +ML RMY  WAEK  FK + L    G+  G KS T  +KG   +G+L
Sbjct: 127 SAGAGGTESCDWVSMLYRMYFLWAEKNNFKIKKLNSLQGDIIGFKSITFEVKGFYPFGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D++ +RHTSF+S+++YP++   + ++I  SD   DT+R+ GAGGQ
Sbjct: 187 KGENGVHRLVRISPFDNS-KRHTSFASVYIYPLIKKDLNLDIKASDITWDTFRSGGAGGQ 245

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++ VR+ H PT ++++  + RSQ +NK +A  +L+++LY +E  K++   +  + 
Sbjct: 246 NVNKVETGVRLHHRPTNIIIENSETRSQIQNKNKALKLLKSRLYYIE--KQKLFKSKMKF 303

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           +K +I WG QIR+Y++ PY++VKD++T  E +    VL+G++
Sbjct: 304 NKKKIEWGSQIRNYIMHPYKLVKDIKTGYETSDIHSVLNGEI 345


>gi|223997436|ref|XP_002288391.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975499|gb|EED93827.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 366

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +    L  +  DP +  +    + +M++R   +  +    E      +     EL
Sbjct: 11  LDGIRRSFQALTERLADPDVIADSNLLRQVMKDRSQSEETVQAFDEYCQLETELEGAQEL 70

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E  DD  + +     ++ I++ ++  +       L     D  +  LE+ AG GG+E+
Sbjct: 71  FQEAGDDVEMREMARSEMKEIEVRLDELETLIKILLLPKDPNDDRNCMLEIRAGTGGSEA 130

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL +Y ++     ++   ++   G++ G K+  L +KG + Y  LK E GVHR+
Sbjct: 131 NIFAGDLLDVYRKFMSAEGWQVSMMDSSPGDDGGYKNVVLEVKGDSVYSKLKWEAGVHRV 190

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D ++++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 191 QRVPATETQGRVHTSTATVAIMPEC-DEVDVKIDPKDIEMSTMRSGGAGGQNVNKVETAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGWG 309
            + H PTG+ ++C QERSQ KNK  A  ML A+LY++E +KRE         +    G  
Sbjct: 250 DLLHKPTGIRIKCTQERSQLKNKELAMKMLMARLYDIENEKREAEERERRGVQIGTGGRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +    V D R   +     + L GD+   +   +   +
Sbjct: 310 EKIRTYNWKDS-RVSDHRLG-QNFPLQNFLSGDVGPIIDGLIIKDQ 353


>gi|239917332|ref|YP_002956890.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|281414188|ref|ZP_06245930.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|239838539|gb|ACS30336.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
          Length = 369

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 170/348 (48%), Gaps = 10/348 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +     L  +  DP + Q+   A+ L R    L   ++  +       +     EL
Sbjct: 11  VDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAAAEELADAREL 70

Query: 76  ALEEDDCSILQ--ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           A   DD +     E            E  +   +     D+ D  LE+  G GG E+  +
Sbjct: 71  AAAGDDDAAAFAAEVPGLEAAEAEAAERLRRLLIPRDPDDARDVILEIKGGEGGEEAALF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGV 187
           A  LLRMY R+A+ R +KTE L     +  G K   + ++G         Y  LK E GV
Sbjct: 131 AGDLLRMYLRYADSRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPADGVYARLKFEGGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P VD   E+ +  +D ++D +R+SG GGQ VNTTD
Sbjct: 191 HRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFRSSGPGGQSVNTTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVR+TH+PTG+VV  Q E+SQ +N+  A  +LR++L E +  +++   +   +++   +
Sbjct: 251 SAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDAEDSAARAAQVRTM 310

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   + D RT  +  +   VLDGDL+  + + LA+ 
Sbjct: 311 DRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357


>gi|260435474|ref|ZP_05789444.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
 gi|260413348|gb|EEX06644.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
          Length = 365

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 168/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   +E+Q    +     +L
Sbjct: 10  LETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D ++ +   D L  ++ +     E      L     D     LE+ AGAGG E+
Sbjct: 70  LKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++K  +  +++   + +  G +   L ++G + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYSQKVGWAVQSMSCTEADLGGFRELILSVRGESVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL E E     E  ++   +        
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRAQVGSGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R      +   VL+G L+D + A +A ++
Sbjct: 309 EKIRTYNYKD-NRTTDHRLG-RNFTLEPVLEGQLEDLIGACIAEEQ 352


>gi|297182948|gb|ADI19096.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_34A12]
          Length = 353

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 180/346 (52%), Gaps = 10/346 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  + R + + ++  D        E   L RE   L      I  ++    D    + LA
Sbjct: 2   DKVLARRNEVESRLADAASMS-PDELASLSRELSELRPVCEQIDLVKRLEGDRDAAVMLA 60

Query: 77  LEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E  + + +      E  +   R+  E+   Q   L     DS +A LEV AG GG E+ 
Sbjct: 61  EEAAEDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 121 LFASDLFGMYQRFAGKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I++ ESD RID +RASG GGQ VNTTDSAVR
Sbjct: 181 RVPETEAGGRIHTSAATVAVLPEA-EDVDIDVQESDLRIDVFRASGPGGQSVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIPTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + + E A   +          
Sbjct: 240 ITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAERAASRKGQVGSGDRSE 299

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+ G+ LD+ ++A +A  +
Sbjct: 300 RIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQ 344


>gi|162138527|ref|YP_483698.2| peptide chain release factor 1 [Rhodopseudomonas palustris HaA2]
 gi|119361590|sp|Q2J423|RF1_RHOP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 361

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 105/339 (30%), Positives = 168/339 (49%), Gaps = 6/339 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +        + +     + E   L  A+   +E++D L D   LLE 
Sbjct: 9   LDVLLAHHASLEAQLLGEVAANDYVRITRELSELNPLVEAVKAYREVRDELGDIDDLLED 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE--VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              + +   + E   +      E  ++  +   L     D  +  LE+ AG GG E+  +
Sbjct: 69  PATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGTGGDEASLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+ R+
Sbjct: 129 AGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P V + ++++I   D +IDT RA GAGGQHVN T+SA+RIT
Sbjct: 189 PDTETQGRIHTSAATVAVLPEV-EEVDVDIKPDDLKIDTMRAQGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQI 312
           H+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +   +   +          +I
Sbjct: 248 HLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSARSAERKQKVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
           R+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 308 RTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
          Length = 388

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 176/345 (51%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +  +  +P +  +      L +    L + +S    +     D     +L
Sbjct: 36  IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 95

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           A E  D   +QE      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 96  ANE--DPVFVQEAER--LRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 151

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 152 AADLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRV 211

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  +D R+D YR+SG GGQ VNTTDSAV
Sbjct: 212 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAV 270

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 271 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 330

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL + + A  A +
Sbjct: 331 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 374


>gi|33241132|ref|NP_876074.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81663962|sp|Q7V9Z0|RF1_PROMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33238662|gb|AAQ00727.1| Protein chain release factor A [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 365

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A    + L  +  DP +  +  + + + RER  L+  +   KE+Q    +     EL
Sbjct: 10  LETASATFNNLELQLADPDVASDPKKLETIARERARLEPLVLDYKELQAIDLEYKEAKEL 69

Query: 76  ALEED-DCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L R+    K  V       L     D     LE+ AGAGG E+
Sbjct: 70  LRQSKSDKEMEALAQEELIRLEELEKDLVNRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+  K  +  +A+   + +  G +   + +KG   +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISVKGKAVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E+++  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVEVKLEPTDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL E E+   E  A    +   ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREI--EEANAKERSARLAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  +       VL+G+LDD + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGV-NFPLETVLEGELDDLIGACIAEEQ 352


>gi|21672454|ref|NP_660521.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009047|sp|Q8K9X0|RF1_BUCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21623068|gb|AAM67732.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 361

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 167/338 (49%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   +           N  + K L +E   +   +    + +    D   +  L
Sbjct: 9   LKSLRNRYEEIEIMLSQKDTISNQEKFKNLSKEYLQISEIVKNFIKWEKLETDIKNINLL 68

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +D  +     + L    ++ K   E  +   L     D +  ++E+ A  GG ES 
Sbjct: 69  F---NDVEMHDIAQEELFIVKKQKKKLEEKIKILLLPVDPNDQHSCFIEIRAATGGDESS 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE   +KTE +   + E  G K     + G  A G LK E G HR+ 
Sbjct: 126 IFAGELFRMYTRYAENYMWKTEIMSSSENERGGFKEIIAKVTGKGACGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + PV   + + EI  SD +IDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSTCTVAIMPVRPKTKKEEIKVSDLKIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           ITHIP+G VV+CQ ERSQHKNKA+A ++L A++Y  +L K ++E +++            
Sbjct: 246 ITHIPSGNVVECQDERSQHKNKAKALSILSARVYADKLAKSQKENSSMRRILLGTGERSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           + R+Y       + D R N+     ++VL G LD  + 
Sbjct: 306 RNRTYNFA-QNRITDHRINLTIYKLNEVLQGKLDLLID 342


>gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|75497913|sp|Q5GSS8|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 359

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 189/345 (54%), Gaps = 11/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++ +++  K E+P       E   L +E   L   I  I E      + L L E+
Sbjct: 7   LQDLKRKFNYIERKLENPTNLS-QKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEEI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV------EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +E+    ++E +      K +V         +   L   E DS +A LE+ AG GG E
Sbjct: 66  IKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A ML RMY ++AE+R +K E + I      G K A+ LI G   +  LK E GVHR
Sbjct: 126 AALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S+ R HTS +++ + P V + ++ +I E D RID YR+SG GGQ VNTTDSA
Sbjct: 186 VQRVPETESSGRLHTSAATVAILPEV-EEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308
           VR+TH+PT +VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E E + + +S       
Sbjct: 245 VRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEIERSTMRKSQIGSGDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       ++ +G+LD+F++  ++
Sbjct: 305 SERIRTYNF-PQSRITDHRINLTSHQLEQIIKEGELDEFIEVLIS 348


>gi|258542227|ref|YP_003187660.1| peptide chain release factor 1 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633305|dbj|BAH99280.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636364|dbj|BAI02333.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639417|dbj|BAI05379.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642473|dbj|BAI08428.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645528|dbj|BAI11476.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648581|dbj|BAI14522.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651634|dbj|BAI17568.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654625|dbj|BAI20552.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 352

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 19/346 (5%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   D  V R   L  +     L  N        RE   ++  ++ I  +++       
Sbjct: 3   FDERLDQIVSRALELEAQLAS-GL--NGEAFTQASREYAEIEPVVARINALREVEDGIQQ 59

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             +L     D  + +     L  ++ ++   Q       L    AD+  A LEV   AGG
Sbjct: 60  AEQLLA---DPEMKELAEAELAELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGG 116

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L  MY R+A+   ++   ++  + E  G++     I G   +  LK E GV
Sbjct: 117 DEAGLFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGV 176

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++E++E+D R+D +RASGAGGQHVN T+
Sbjct: 177 HRVQRVPATESQGRIHTSTVTVAVLPEA-EEVDVEVNETDLRVDVFRASGAGGQHVNKTE 235

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LYE E    +  AN     ++++G
Sbjct: 236 SAVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERER--AQAHANRAADRRSQVG 293

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R N+       V+ G+LD+F+ A 
Sbjct: 294 TGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVDAL 338


>gi|85713812|ref|ZP_01044802.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
 gi|85699716|gb|EAQ37583.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
          Length = 358

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 105/342 (30%), Positives = 168/342 (49%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L  +    H+  +      + RE   L+  +  +K+ +    +   +  +
Sbjct: 7   LDLLLARHAALENELLS-HVSAD--RYVQMTRELAELNPVVEAVKDWRAITAEIAGIDAM 63

Query: 76  ALE-EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +          ++      ++  +   L     D  +  LEV AG GG E+
Sbjct: 64  IADPATDAEMRAMAEAERPALEARNNELMQQIRIALLPKDAMDERNVMLEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  AY  +K E GVHR+
Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAEVQGRGAYAKMKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++EI   D RI+T RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTEAQGRVHTSAATVAVLPEA-EEVDVEIKPDDLRIETMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y++E Q+     +     +   G   
Sbjct: 243 RITHIPTGIVVNMQDSRSQHKNRASAMNILRSRIYDVERQRINAARSADRKDQVGSGDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+       V+ GD L + + A 
Sbjct: 303 ERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDAL 343


>gi|150008712|ref|YP_001303455.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|255014510|ref|ZP_05286636.1| peptide chain release factor 1 [Bacteroides sp. 2_1_7]
 gi|256841252|ref|ZP_05546759.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298375991|ref|ZP_06985947.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|301311522|ref|ZP_07217449.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
 gi|166223582|sp|A6LDR9|RF1_PARD8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149937136|gb|ABR43833.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|256737095|gb|EEU50422.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298267028|gb|EFI08685.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|300830608|gb|EFK61251.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
          Length = 369

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   + T   DP +  ++     L +E + L+  +    E    L        L
Sbjct: 10  LDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKAL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L      +    E  +   + +   D  +A +E+  G GG E+ 
Sbjct: 70  LESEQDPEMREMAREELDTCNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 LFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEA-DEFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +        +   ++++C + R Q KNK +A   LR+ +Y+ E QK  ++IA+  ++ 
Sbjct: 249 LRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIASKRKTM 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + S  +DG++ D +   +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAE 359


>gi|225159115|ref|ZP_03725422.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
 gi|224802321|gb|EEG20586.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
          Length = 373

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 168/348 (48%), Gaps = 12/348 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D     +R   L+ +   P  + +   A  + RE Q +   ++     +  L +      
Sbjct: 6   DISLFQRRADELDAQMRSPTFYNDARAAAAVTREHQQVTQLLADHAAHRKTLAEIAEAQA 65

Query: 75  LALE-EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTE 129
           L  +   D  + +     L  ++   E      L         DS D  LE+ AG GG E
Sbjct: 66  LIKDPSADPDLRELAEAELPELEARRERLFRTVLAGMIPPEPTDSRDTVLEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE R +  E     + E  G +  + +I+G + Y  LK E GVHR
Sbjct: 126 AALFAAELARMYHRYAEDRGWTVEPTGSSESERGGFREVSFIIRGQDVYKQLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++N R HTS  ++ V P   + ++I I   D  I   RASG GGQ VNTTDSA
Sbjct: 186 VQRVPLTEANGRIHTSTVTVAVLPEAQE-VDIRIDPQDLEITVQRASGPGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H PTG++V C   RSQ KNKA A ++LRA+L  L+ ++ EE A      + +IG G
Sbjct: 245 VRIVHKPTGMIVYCADGRSQQKNKASAMSVLRARL--LQRKQDEEAAKYAAQRRGQIGTG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   + D R  +   S + V++G L++ ++     +
Sbjct: 303 DRSERIRTYNF-PQNRLTDHRIGLTLYSLTQVMEGALNEVVQPLQKAE 349


>gi|294085498|ref|YP_003552258.1| protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665073|gb|ADE40174.1| Protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 358

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 181/348 (52%), Gaps = 14/348 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILL 73
           D  + R + +     D      V E     RE   L      I  ++ +   L D  +++
Sbjct: 8   DKVLARRTEVENILNDAASLS-VDEMANFARELSELRPVCEQIELVQRLTSELSDAEVMV 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTE 129
                 DD  +L+     +Q ++ ++  +Q +           D+ +A LEV AG GG E
Sbjct: 67  --GEAGDDPDMLEMARLEMQELQAQIPDEQQKLQLLLLPKDRDDARNAILEVRAGTGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A+ L  MY R++ K  +K E +E+ +    G K AT  I G + +  LK E GVHR
Sbjct: 125 AALFASDLFGMYQRFSAKYGWKFEVMEVSETGIGGYKEATATITGSDVFARLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + +++E+ ESD RID +RASG GGQ VNTTDSA
Sbjct: 185 VQRVPETETGGRIHTSAATVAVLPEA-EDVDVEVVESDLRIDVFRASGPGGQSVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGW 308
           VRITH+PTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + + E A   +        
Sbjct: 244 VRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVQAERAADRKGQVGSGDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       V+ G+ LD+ + A ++  +
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDRVIAGEALDEVIDALISEDQ 350


>gi|114327270|ref|YP_744427.1| peptide chain release factor 1 [Granulibacter bethesdensis CGDNIH1]
 gi|119361545|sp|Q0BUJ8|RF1_GRABC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114315444|gb|ABI61504.1| bacterial peptide chain release factor 1 (RF-1) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 352

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 173/348 (49%), Gaps = 19/348 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            D  V R   L     +  L  N        RE   L+  ++ I+E+   +  L +   +
Sbjct: 7   LDRIVARAEELRASLSE-GL--NGDSFAAASRELAELEPVVARIEELWAAERGLAEAEAM 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           L       D  + +      + ++ ++       +   L   EAD   A LE+   AGG 
Sbjct: 64  L------ADPDMRELAESEAEILREKLPSLTREIRIALLPKDEADERSAILEIRPAAGGD 117

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L  MY R+AE R ++ E LE  D    G+K     I G + +  LK E GVH
Sbjct: 118 EASLFAAQLFSMYQRYAEIRGWRFEILEYDDTGLGGLKGGMAEITGRSVFARLKYESGVH 177

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P   + +++++ E D RID YRASGAGGQHVN T+S
Sbjct: 178 RVQRVPATESQGRIHTSTVTVAVLPEA-EDVDVQVDEGDLRIDVYRASGAGGQHVNKTES 236

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIG 307
           AVRITH+P+G+VV  Q+E+SQHKN+A+A  +L+A+LYE +        A    +      
Sbjct: 237 AVRITHLPSGIVVAMQEEKSQHKNRAKAMKILKARLYEQQRAALHASRAADRRAQVGTGD 296

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+LDDF+ A  A  +
Sbjct: 297 RSERIRTYNF-PQGRVSDHRINLTLYKIDRVMLGELDDFVDALTAEDQ 343


>gi|116515052|ref|YP_802681.1| hypothetical protein BCc_111 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285552|sp|Q057W1|RF1_BUCCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116256906|gb|ABJ90588.1| peptide chain release factor 1 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 357

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 175/343 (51%), Gaps = 13/343 (3%)

Query: 16  WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             +  +R   L     +       +  E   L +E+ +L +             +    +
Sbjct: 9   LKSLKKRYIQLEKLLSNNYSKF--DKREFSKLSKEKANLYDLYKEFMSWLSIKSEIKD-I 65

Query: 74  ELALEEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +L L + D S L  +E    L+R K   +  +   +     D N  ++E+ A  GG E+ 
Sbjct: 66  QLLLNDLDLSTLAQEELLIALKRKKEIEKKIKMLLIPIDPYDKNSCFIEIRAATGGHEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L +MY ++A+ + +K + + +H+GE+ G K   L + G  A G LK E G HR+ 
Sbjct: 126 IFSGDLCKMYMKYADFKSWKVDIINMHEGEKGGYKEIILKVIGIGACGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P V  S  I ++ SD +IDT+R+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPQTESQGRVHTSACTVAIMPEVPKSKRIILNTSDLKIDTFRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+PTG VV+CQ ERSQHKNK +A ++L AK+Y       E+        K+ +G G  
Sbjct: 246 ITHLPTGCVVECQDERSQHKNKEKALSVLSAKIYS--KMNAEKKLKNSLMRKSLLGTGER 303

Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + R+Y       V D R N+     ++VL G LD  ++  L
Sbjct: 304 SDRNRTYNFS-QNRVTDHRINLTIYRLNEVLLGKLDLLIEPLL 345


>gi|256372571|ref|YP_003110395.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009155|gb|ACU54722.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 357

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 175/344 (50%), Gaps = 6/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           ++      + +  +  DP ++Q+   A+ + R  + L+  +  ++ +Q    D     EL
Sbjct: 6   YERFEHEYARVLEELADPAIFQDQRRAREVARRHKELEAIVGALRRVQALEGDRDAAREL 65

Query: 76  ---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              A   +   +  E  +    +    E  +   L S   D     LE+    GG E+  
Sbjct: 66  YRGASPAEREELKAELDEIDAALARAREALELLLLPSDPNDGRAVILEIRGAEGGEEANL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L  MY RWA++R +K E L     +  G    TLL++G +A+  LK E G HR+ R
Sbjct: 126 FAKDLADMYERWADRRSWKVEVLSRSVSDLGGYDDVTLLVRGDDAWKRLKHEAGPHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++   P   D IE+ I  SD RID YR++G GGQ VNTTDSAVRI
Sbjct: 186 VPVTETQGRVHTSSATVTALPEA-DEIEVSIDPSDLRIDVYRSTGPGGQSVNTTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQ 311
           TH+PTG+VV  Q E+SQ +N+A+A  +LRA+L +LE  KR+ E+    ++     G   +
Sbjct: 245 THLPTGIVVAMQDEKSQIQNRAKALQVLRARLLKLEQDKRQAELTATRKAQIRSGGRSEK 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y  +    V D R  +       +L GDLD+   A L  ++
Sbjct: 305 IRTYNFKE-NRVTDHRIGLTLYRLDQILQGDLDELSDALLVHER 347


>gi|116515195|ref|YP_802824.1| hypothetical protein BCc_269 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257049|gb|ABJ90731.1| peptide chain release factor RF-2 [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 365

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 130/275 (47%), Positives = 191/275 (69%), Gaps = 1/275 (0%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D +IL+E +   + IK ++   +   + + + D N+ YL++ +G+GG ESQDW  MLL
Sbjct: 90  ENDINILKEINIQYKAIKNKIYVLESYMMFNHKNDKNNCYLDIQSGSGGLESQDWTKMLL 149

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           +MY ++  K+KF T+ +    G+  GIKS TL IKG  A+GWL+ E G+HRLVR SP+D+
Sbjct: 150 KMYLKYLYKKKFVTKIISETVGDNGGIKSITLSIKGKFAFGWLRTETGIHRLVRKSPFDA 209

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             +RHT+FSSI+VYP + ++I+I +   + RID YR+SGAGGQHVN T+SAVRITH+PTG
Sbjct: 210 GKKRHTTFSSIFVYPALTNNIDINLQSKNLRIDVYRSSGAGGQHVNRTESAVRITHLPTG 269

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V QCQ  RSQHKNK  A   L+AKLYE+E++K++         K+ I  G QIRSY+L 
Sbjct: 270 IVTQCQNSRSQHKNKNTAIKQLKAKLYEIEIKKKKIEKKKINKKKSNIRSGNQIRSYILD 329

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               +KD+RT +E+   ++VL+GD+ +F+K +L +
Sbjct: 330 DS-RIKDMRTKLERKDINNVLNGDIHEFIKKSLKM 363


>gi|115522190|ref|YP_779101.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisA53]
 gi|122298096|sp|Q07VB3|RF1_RHOP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115516137|gb|ABJ04121.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisA53]
          Length = 359

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L  +   P    N      + RE   L+  +  +K  +    +   +  L
Sbjct: 9   LDILLARHAALEAQLLGP---VNSEHYVKITRELAELNPLVDAVKAYRQVRDEIGDIDSL 65

Query: 76  ALEED-DCSILQETSDN---LQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             + D D  +          L+  + E+ +  +   L     D  +  LEV AG GG E+
Sbjct: 66  IADPDSDPELRAMAQAEHAALEEHEAELAQQIRIALLPKDAMDDRNVMLEVRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGAAGGFKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P V + +++EI + D +IDT RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVMPEV-EEVDVEIKQDDLKIDTMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +   +     K   G   
Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDAARSAERKEKVGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 305 ERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDAL 345


>gi|281208935|gb|EFA83110.1| peptide chain release factor 1 [Polysphondylium pallidum PN500]
          Length = 463

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 101/336 (30%), Positives = 181/336 (53%), Gaps = 10/336 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              + + L +  E   L     + K    + Q ++ ++   ++  + + +   L  +   
Sbjct: 113 MSNKYTTLKSLMESQTLS--QEDIKRTSNDAQQIEESVQLFRQYVNEIGNIKELKMMLDM 170

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E + +  +   ++L+ +  ++   +    +  L + + D  +A +E+ AG GG E+Q +A
Sbjct: 171 EKEEASREMIIEDLKAMGEQLAALEKSLIYSLLPADKDDDGNAIIEIRAGTGGGEAQLFA 230

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + + RMY  +A  + ++ E+L+I   +  G + A+  I G   +G+LK E GVHR+ RI 
Sbjct: 231 HEMFRMYEGYAATKGWRFESLDISYTDVGGCREASAAISGKGVFGFLKNESGVHRVQRIP 290

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ + P   + ++I+I++ D +ID +R+SG GGQ VNTTDSAVRI H
Sbjct: 291 DTETQGRIHTSTTTVAIMPEPKE-VDIKINDRDLKIDVFRSSGNGGQSVNTTDSAVRIVH 349

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           +PTG+ V  Q ERSQ +NK++A  +LRA+LYE+E  + + E +    S         +IR
Sbjct: 350 LPTGITVSMQDERSQLQNKSKAMKVLRARLYEMERVRLQTERSAERNSQIGGATRSERIR 409

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           +Y   P   V D R NI       ++ G+ L DF++
Sbjct: 410 TYNF-PQDRVTDHRVNITTNDIDAIMTGETLGDFIE 444


>gi|255548277|ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545675|gb|EEF47179.1| peptide chain release factor, putative [Ricinus communis]
          Length = 422

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 180/345 (52%), Gaps = 14/345 (4%)

Query: 19  AVQRLSFLNTKTED-PHLWQN----VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             QRLS +  ++    +          E     +E + L   +  I E++    +   L 
Sbjct: 65  MEQRLSAIEHRSAYLENFIDKLEASPAEYSRANKELRKLRRPVELISELRSIQKEIDGLR 124

Query: 74  ELALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
            L  E  +D  ++   ++ L +   E +  Q       L + +AD  D  LEV AG GG 
Sbjct: 125 SLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLLPTDDADERDCILEVRAGTGGE 184

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  + RMY R+++K+ +K E ++I + +  G K A+  I G   +G LK E G+H
Sbjct: 185 EASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAISGAGVFGKLKFESGIH 244

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+S
Sbjct: 245 RVQRVPVTEKSGRVHTSAVSVAILPQA-DEVDVQLRNEDLRIDTYRSGGSGGQHANTTNS 303

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIG 307
           AVR+TH+PTG+ V  Q ERSQH NKA+A  +L AKLYE+E  + +   + +         
Sbjct: 304 AVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQMSRSKLRSEQIGSGD 363

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
              +IR+Y   P   V D R  I   + ++++ G+ LD F+ A L
Sbjct: 364 RSERIRTYNF-PQGRVTDHRVGITHHAINNMMQGESLDVFIDALL 407


>gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440]
 gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora
           tropica CNB-440]
          Length = 362

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/337 (30%), Positives = 164/337 (48%), Gaps = 14/337 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI-QDRLCDNLILLELAL 77
            +   + L  +  DP +  +   A+ + R    L        E+ Q R          A 
Sbjct: 9   LLDEYAELENRLADPAIHADQNTARRVGRRYAELVPLHKAATELTQARADLAAAKELAAE 68

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +    +  +  +  L  ++  +       +     D+ D  +E+ AG GG ES  +A  L
Sbjct: 69  DPAFAAEAEAIAATLPALEECLAEL---LIPRDPHDAKDVIVEIKAGEGGEESALFAGDL 125

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRL 190
           LRMYTR+AE+  +  E ++  D +  G+K  +L IK       G   +  LK E GVHR+
Sbjct: 126 LRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + + P   + I++ I  ++ RID +R+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIHTSAAGVLMLPEA-EEIDVTIDPNELRIDVFRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWG 309
           RITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L  +  ++ +  A+    +    +   
Sbjct: 245 RITHLPTGIVVSCQNEKSQLQNREQAMRILRARLLAVAQEQADAAASDARKAQVRTVDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            +IR+Y   P   + D R      +    L G+LD  
Sbjct: 305 ERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|218196470|gb|EEC78897.1| hypothetical protein OsI_19275 [Oryza sativa Indica Group]
 gi|222630945|gb|EEE63077.1| hypothetical protein OsJ_17885 [Oryza sativa Japonica Group]
          Length = 368

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 119/340 (35%), Positives = 183/340 (53%), Gaps = 11/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR ++L  +   P    +  E     +E   L++ +  I+E++ +  +   L  L   
Sbjct: 20  IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 77

Query: 79  E-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDW 133
             ++    +  +  L +   E +  Q +     L   EAD  D  LEV AG GG E+  +
Sbjct: 78  SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 137

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + +MY ++++K  +K +A++I +    G K A+  I GP AYG LK E G+HR+ R+
Sbjct: 138 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 197

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 198 PVTEKSGRVHTSAVSVAILPQA-DEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 256

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           H+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  +   + + +            +I
Sbjct: 257 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSERI 316

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           R+Y   P   V D R  I   S  DV++G+ LD F+ A L
Sbjct: 317 RTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 355


>gi|146337703|ref|YP_001202751.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
 gi|146190509|emb|CAL74508.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
          Length = 361

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 159/320 (49%), Gaps = 9/320 (2%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIK 96
           N      + RE   L+  I  +K  +  + +      L  + D D  +          + 
Sbjct: 28  NSDRYVQITRELAELNPLIDAVKAYRAGVKELADTEALIADPDTDAEMRAMAESERDELV 87

Query: 97  LEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
                 +       L     D  +  LE+ AG GG E+  +A  L RMY R+A  + +K 
Sbjct: 88  ARRGELEQKIRIALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKV 147

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E +   +G   G K     ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V 
Sbjct: 148 EVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVL 207

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P + + ++++I + D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV  Q  RSQHKN
Sbjct: 208 PEI-EDVDVDIKQDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKN 266

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIE 331
           +A A N+LR+++Y+ E QK +   +     K   G    +IR+Y   P   V D R N+ 
Sbjct: 267 RASAMNILRSRIYDAERQKVDAARSAERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLT 325

Query: 332 KTSPSDVLDGD-LDDFMKAT 350
                 V+ G+ L + + A 
Sbjct: 326 LYKLPQVIAGEALGELVDAL 345


>gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 365

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 170/344 (49%), Gaps = 12/344 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +     + T+   P    +  + K L R    L   +   +  +    D     E+ 
Sbjct: 9   EQVLAEHRKIETEMSSPEALSSPEKMKSLGRRYAELGRVVRVYQAYRRAEADLSETREIV 68

Query: 77  LE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               ED      E     +         +   +     D+ DA +EV AG GG ES  +A
Sbjct: 69  EAGGEDAELFRPELPGLQEAYAQAEAALKDALIPRDPDDARDAIVEVKAGEGGEESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--------GPNAYGWLKGEQG 186
             LLRMY R+AE+  ++T+ L     E  G K   L ++            +  LK E G
Sbjct: 129 GDLLRMYERYAERMGWQTQILSSVPTELGGFKDVQLAVRLRSAPEDPADGVWAHLKFEAG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V+  VDD  E+EI+++D R+D +R+SG GGQ VNTT
Sbjct: 189 VHRVQRVPVTESQGRLHTSAAGVLVFAEVDDPGEVEIADADIRVDVFRSSGPGGQSVNTT 248

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTE 305
           DSAVRITHIPTG+VV CQ E+SQ KN+  A  +LRA+L +++L+++ EE A +  S    
Sbjct: 249 DSAVRITHIPTGLVVSCQDEKSQIKNREAAMRVLRARLRQMQLEQQAEENAAMRRSQVRT 308

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           +    +IR+Y   P   + D RT  +  +   VL G+L   + +
Sbjct: 309 VDRSERIRTYNF-PENRISDHRTGYKAYNLDQVLAGNLGPLVDS 351


>gi|262383596|ref|ZP_06076732.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
 gi|262294494|gb|EEY82426.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
          Length = 369

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   + T   DP +  ++     L +E + L+  +    E    L        L
Sbjct: 10  LDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKAL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L      +    E  +   + +   D  +A +E+  G GG E+ 
Sbjct: 70  LESEQDPEMREMAREELDACNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 LFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  ++EI+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEA-DEFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +        +   ++++C + R Q KNK +A   LR+ +Y+ E QK  ++IA+  ++ 
Sbjct: 249 LRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLDDIASKRKTM 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y   P   + D R N    + S  +DG++ D +   +  +
Sbjct: 309 VSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAE 359


>gi|148258772|ref|YP_001243357.1| peptide chain release factor 1 [Bradyrhizobium sp. BTAi1]
 gi|146410945|gb|ABQ39451.1| bacterial peptide chain release factor 1 (bRF-1) [Bradyrhizobium
           sp. BTAi1]
          Length = 361

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 113/320 (35%), Positives = 172/320 (53%), Gaps = 9/320 (2%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL-ELALEEDDCSILQETSDNLQ 93
           N      + RE   L+  I  +K  +     L D   L+ + A + +  ++ +   D L 
Sbjct: 28  NSDRYVQITRELAELNPLIEAVKAYRAGVKELADTEALIADPATDAEMRAMAEAERDELI 87

Query: 94  RIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             + E+E K   +LL  +A D  +  LE+ AG GG E+  +A  L RMY R+A  + +K 
Sbjct: 88  ARRGELEQKIRVALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKV 147

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E +   +G   G K     ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V 
Sbjct: 148 EVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVL 207

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P V + ++++I + D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV  Q  RSQHKN
Sbjct: 208 PEV-EEVDVDIKQDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKN 266

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIE 331
           +A A N+LR+++Y+ E QK +   +     K   G    +IR+Y   P   V D R N+ 
Sbjct: 267 RASAMNILRSRIYDAERQKVDAARSAERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLT 325

Query: 332 KTSPSDVLDGD-LDDFMKAT 350
                 V+ G+ L + + A 
Sbjct: 326 LYKLPQVIAGEALGELIDAL 345


>gi|330469860|ref|YP_004407603.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
 gi|328812831|gb|AEB47003.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
          Length = 362

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 171/344 (49%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D     EL
Sbjct: 6   LARLLDEYAELEKRLADPAIHADQGTARRVGRRYAELVPLHKAAAELEQARADLAAAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
           A E+         ++ L      +E +  E L+     D+ D  +E+ AG GG ES  +A
Sbjct: 66  AAEDP---SFAAEAETLAAELPALEERLAELLIPRDPHDAKDVIVEIKAGEGGEESALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGV 187
             LLRMYTR+AE+R + TE ++  D +  G+K  +L IK       G   +  LK E GV
Sbjct: 123 GDLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVWSRLKWEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P   + +++ I  ++ RID +R+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESQGRIHTSAAGVLVLPEA-EEVDVTIDPNELRIDVFRSSGPGGQSVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEI 306
           SAVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L    + Q     ++  ++    +
Sbjct: 242 SAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARLLAAAQEQADAAASDARKAQVRTV 301

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   + D R      +    L G+LD  + A 
Sbjct: 302 DRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGVLDAL 344


>gi|168830308|gb|ACA34405.1| PrfA [uncultured bacterium pTW2]
          Length = 360

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 112/322 (34%), Positives = 164/322 (50%), Gaps = 8/322 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP    +    + L RE   L+     +        D      +  + +   + +E    
Sbjct: 25  DPGTIADAERFRALSREFAQLEPVAVALAAENRAQRDLAAAQAMRSDPELGGLAEEEIAA 84

Query: 92  LQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
                 E+E +    L+     D  + YLEV AG GG E+  +A  L RMY R+AE++ +
Sbjct: 85  ANARLQELESELMAQLVRRDPRDDGNLYLEVRAGTGGDEAAIFAGDLFRMYARYAERQGW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E      GE  G K     ++G  AY  LK E G HR+ R+   +S  R HTS +++ 
Sbjct: 145 KLEVESASVGEHGGYKEIVARVEGRGAYSKLKFESGTHRVQRVPDTESQGRIHTSAATVA 204

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +       + IEI+ +D RIDT+R+SGAGGQHVN TDSA+RITH+P+GVVV+ Q ERSQH
Sbjct: 205 IIAEDSSDVAIEINPADLRIDTFRSSGAGGQHVNKTDSAIRITHLPSGVVVENQTERSQH 264

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLR 327
            N+ +A   LRA L E E  +RE  A   +  K ++G G    +IR+Y   P   + D R
Sbjct: 265 ANRDKAMKRLRAMLVEAETSRRE--AAQAQDRKLQVGSGDRSQRIRTYNY-PQGRITDHR 321

Query: 328 T-NIEKTSPSDVLDGDLDDFMK 348
              +      +VL+G+LD  ++
Sbjct: 322 VEGLTLYDLPNVLEGNLDALIE 343


>gi|115462961|ref|NP_001055080.1| Os05g0277300 [Oryza sativa Japonica Group]
 gi|113578631|dbj|BAF16994.1| Os05g0277300 [Oryza sativa Japonica Group]
          Length = 349

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 119/340 (35%), Positives = 183/340 (53%), Gaps = 11/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR ++L  +   P    +  E     +E   L++ +  I+E++ +  +   L  L   
Sbjct: 1   IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 58

Query: 79  E-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDW 133
             ++    +  +  L +   E +  Q +     L   EAD  D  LEV AG GG E+  +
Sbjct: 59  SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + +MY ++++K  +K +A++I +    G K A+  I GP AYG LK E G+HR+ R+
Sbjct: 119 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 178

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 179 PVTEKSGRVHTSAVSVAILPQA-DEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 237

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           H+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  +   + + +            +I
Sbjct: 238 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSERI 297

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           R+Y   P   V D R  I   S  DV++G+ LD F+ A L
Sbjct: 298 RTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 336


>gi|48926665|gb|AAT47454.1| putative peptide chain release factor [Oryza sativa Japonica Group]
          Length = 350

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 119/340 (35%), Positives = 183/340 (53%), Gaps = 11/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR ++L  +   P    +  E     +E   L++ +  I+E++ +  +   L  L   
Sbjct: 2   IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 59

Query: 79  E-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDW 133
             ++    +  +  L +   E +  Q +     L   EAD  D  LEV AG GG E+  +
Sbjct: 60  SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 119

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + +MY ++++K  +K +A++I +    G K A+  I GP AYG LK E G+HR+ R+
Sbjct: 120 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 179

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 180 PVTEKSGRVHTSAVSVAILPQA-DEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 238

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           H+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  +   + + +            +I
Sbjct: 239 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSERI 298

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           R+Y   P   V D R  I   S  DV++G+ LD F+ A L
Sbjct: 299 RTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 337


>gi|297517277|ref|ZP_06935663.1| peptide chain release factor 1 [Escherichia coli OP50]
          Length = 274

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 102/245 (41%), Positives = 148/245 (60%), Gaps = 2/245 (0%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
                D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K 
Sbjct: 16  PKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKE 75

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
               I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D
Sbjct: 76  IIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPAD 135

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  
Sbjct: 136 LRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAA 195

Query: 288 ELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           E+ KR++       +    G    + R+Y   P   V D R N+      +V++G LD  
Sbjct: 196 EMAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDML 254

Query: 347 MKATL 351
           ++  +
Sbjct: 255 IEPII 259


>gi|297183691|gb|ADI19816.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_37G09]
          Length = 357

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 112/325 (34%), Positives = 168/325 (51%), Gaps = 13/325 (4%)

Query: 40  IEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            E   L RE   +      +   + +   L D   ++E   E  D  + +     +  + 
Sbjct: 30  DELTKLSRELAEVRPVAEQVFVVRHLAQALADARQMIE--EEGADPEMAEMAETEISELG 87

Query: 97  LEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
            ++   + +           DS +A LEV AG GG E+  +A  L  MY R A +  +K 
Sbjct: 88  PQLTEAEHDLKLLLLPKDTDDSRNAILEVRAGTGGDEAALFAADLFGMYQRTASRYGWKF 147

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E +EI +    G K AT  I G + +  LK E GVHR+ R+   ++  R HTS +++ V 
Sbjct: 148 EVMEISETGIGGYKEATANISGQDVFARLKFESGVHRVQRVPETETGGRIHTSAATVAVL 207

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P   D ++IE+SESD R+D +RASG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQHKN
Sbjct: 208 PEAQD-VDIEVSESDLRVDVFRASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKN 266

Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +A+A  +LRA++Y+ E  +++ E A   +          +IR+Y   P   V D R N  
Sbjct: 267 RAKAMKILRARIYDAERARQQAERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINFT 325

Query: 332 KTSPSDVLDGD-LDDFMKATLAIKK 355
                 VL G+ +D+ + A  +  +
Sbjct: 326 LYKLDKVLAGEAIDEVIDALASEDQ 350


>gi|304382675|ref|ZP_07365169.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
 gi|304336300|gb|EFM02542.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
          Length = 370

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 164/352 (46%), Gaps = 15/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   + T   DP +  +      L +E + L++ +   +   + +       ++
Sbjct: 11  LDGLESRYEEVATLITDPDVIADQERYVRLTKEYKDLEDIMDARRRYINCINAIQEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ    ++ ++E + +   +     D+ +  +E+ AG GG E+ 
Sbjct: 71  LNNETDADLKEMAREELQSNETLQPQLEEEIKIALVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ + + +      + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKKFCDSKGWTLSITSVSEGAVGGFKEIDFAVSGTDVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D  E+ I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESS 302
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK  ++IA+  +S 
Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKYVDDIASRRKSL 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +      +IR+Y  Q    V D R           L G++ + + A    +
Sbjct: 310 VSTGDRSAKIRTYNYQ-QGRVTDHRIGFTTHDLQGFLAGNIQEMIDALTVAE 360


>gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
 gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
          Length = 367

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 192/354 (54%), Gaps = 14/354 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++ L G+   +  + R ++L  +   P    +      L +E   L   +  I   + +L
Sbjct: 1   MDNLCGVL--EEILNRHTYLADRLRCPETIPSQE-FSKLSKEYAELKPKVELITRYK-KL 56

Query: 67  CDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLE 120
            +    LEL ++   +D  I +    +LQ I+  V   +FE     L   + D+ +  LE
Sbjct: 57  KEEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVVPKLEFEIRRMLLPKDKDDALNVMLE 116

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V AG GG E+  +A  L  MY ++AE+ K++ E + I   E  G K A   I G   +  
Sbjct: 117 VRAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSEVFAK 176

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   +S  R HTS +++ V P   + ++++I++ D RID YR+SG GG
Sbjct: 177 LKFESGVHRVQRVPETESAGRIHTSTATVAVLPEP-EDVDVKINDKDLRIDVYRSSGPGG 235

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIG 299
           Q VNTTDSAVR+THIPTG+VV  Q E+SQHKN+A+A  +L+ +LYE+E  K ++EI+++ 
Sbjct: 236 QSVNTTDSAVRVTHIPTGIVVIQQDEKSQHKNRAKAMKVLKVRLYEIERNKVQQEISSMR 295

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD-VLDGDLDDFMKATLA 352
           +S         + R+Y   P   + D R N+     ++ V +G+L+  ++A + 
Sbjct: 296 KSQIGSGERSEKTRTYNF-PQGRITDHRINLTTYRINETVKEGELEPIIEALIR 348


>gi|260755553|ref|ZP_05867901.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
 gi|260675661|gb|EEX62482.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 342

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 113/322 (35%), Positives = 171/322 (53%), Gaps = 14/322 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIE 331
            +IR+Y   P   V D R N+ 
Sbjct: 322 ERIRTYNF-PQGRVTDHRINLT 342


>gi|254690018|ref|ZP_05153272.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 337

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 113/322 (35%), Positives = 171/322 (53%), Gaps = 14/322 (4%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLPEA-EDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK E   +    S+   G   
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESERSQARRSQVGSGDRS 316

Query: 310 RQIRSYVLQPYQMVKDLRTNIE 331
            +IR+Y   P   V D R N+ 
Sbjct: 317 ERIRTYNF-PQGRVTDHRINLT 337


>gi|154248977|ref|YP_001409802.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
 gi|154152913|gb|ABS60145.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
          Length = 347

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 123/332 (37%), Positives = 178/332 (53%), Gaps = 16/332 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + L  +  K  + +L   + E   +  E          I E  + L D   L E   E
Sbjct: 8   VKKTLEEIEKKMME-NL--ELKEMIKISAEFTKFKEIDELINEYFNLL-DEKELWE--QE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
                 + +    +++I  E+       L   E    + +LE+ AG GG E+  +A  LL
Sbjct: 62  PGSEDEIAKLDSKIEKISNEIIAL---LLPDDEFRDRNVFLEIRAGTGGEEAALFAGDLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R++E+  + TE ++    +  G K   + IKG N+  ++K E+GVHR+ RI   +S
Sbjct: 119 RMYLRYSERMGWSTEIIDESKSDLGGYKEVVVRIKGKNSGTYMKYERGVHRVQRIPVTES 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P + D +++ I   D RIDTYRASGAGGQ+VN T+SA+RITHIPTG
Sbjct: 179 GGRIHTSTATVAVLPEMKD-VDVYIDPKDIRIDTYRASGAGGQYVNKTESAIRITHIPTG 237

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV CQ ERSQH+NK +A  +LRAKLYEL    +E+   +    K +IG G    +IR+Y
Sbjct: 238 IVVTCQSERSQHQNKEKAMMVLRAKLYELAR--KEQDEKLSSQRKNQIGSGERSEKIRTY 295

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              P   V D R N+   +   VLDGDLD  +
Sbjct: 296 NF-PQNRVTDHRINLTIYNLQAVLDGDLDLII 326


>gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 311

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 117/309 (37%), Positives = 180/309 (58%), Gaps = 16/309 (5%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           +   L   I+ ++E+ +    +  L  LA EE       E    L ++K      +   L
Sbjct: 3   QYNILQKDIAGLEELINNPETDHELKSLAKEE-----FYERQKQLPKVK---HKLKLSLL 54

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
              + D+ +A LE+ AG GG E+  +   L RMYT++AE++ +K E +        G K 
Sbjct: 55  PKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKE 114

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
            +L I G N +  LK E GVHR+ R+   +++ R HTS +++ V P + + ++++I E D
Sbjct: 115 ISLCISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEI-EEVDLKIDEKD 173

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RID YR+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQHKNK++A  +LRA+LY L
Sbjct: 174 LRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNL 233

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDL 343
           E  K++  A I +  K++IG G    +IR+Y   P   + D R N+      D++ +G+L
Sbjct: 234 E--KQKRDAEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLDDIMKEGNL 290

Query: 344 DDFMKATLA 352
           D+F++A +A
Sbjct: 291 DEFIEALIA 299


>gi|285017297|ref|YP_003375008.1| peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283472515|emb|CBA15020.1| probable peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans]
          Length = 361

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 108/326 (33%), Positives = 164/326 (50%), Gaps = 14/326 (4%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
            DP +  +    +   RE   L   ++     +     NL   E      D  + +   +
Sbjct: 24  SDPEVVSDHQRFRDYSREFAQLQP-VATALAEETAAKANLASAEAMRA--DPELRELAEE 80

Query: 91  NLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
            +   +              +     D  + +LEV AG GG E+  +A  L RMY R+AE
Sbjct: 81  EIAAAQAHLADLDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAE 140

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ +K E    + GE  G K     I G  AY  LK E G HR+ R+   +S  R HTS 
Sbjct: 141 RQGWKVEVESDNPGEHGGYKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSA 200

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ + P  DD  EI ++ +D +IDT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ E
Sbjct: 201 ATVAIIPEADDVEEIAVNPADLKIDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTE 260

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMV 323
           RSQH N+ +A   L+A+L + E  K  + A   +  K ++G G    +IR+Y   P   +
Sbjct: 261 RSQHANRDKALKRLKAQLLDAERNK--QAAAEAQDRKLQVGSGDRSQRIRTYNF-PQGRI 317

Query: 324 KDLRT-NIEKTSPSDVLDGDLDDFMK 348
            D R   +       V++GDLD  ++
Sbjct: 318 TDHRVEGLTLYDLPHVIEGDLDALIE 343


>gi|217077770|ref|YP_002335488.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
 gi|217037625|gb|ACJ76147.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
          Length = 358

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 127/341 (37%), Positives = 182/341 (53%), Gaps = 14/341 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + + L  L  K           + +    +   +       KE      +    +EL 
Sbjct: 12  EWSKKLLKSLEEKLSSQLT---PDQIRTYSEKYSKMKEIFQLAKEY----LEIEDEIELW 64

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE       E     ++ +  ++      L   E    + +LE+ AG GG E+  +A  
Sbjct: 65  KEEMPEGFEHEVEKLQKKQEDIMQDLISLVLPESEYSGKNVFLEIRAGTGGEEAALFAAD 124

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+ EK+ FK E ++ +  +  G K   + IKG N    LK E GVHR+ R+   
Sbjct: 125 LLRMYLRYVEKKNFKAEIVDENKTDLGGYKEVVIKIKGKNVGNLLKYESGVHRVQRVPTT 184

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P V  ++EIEI+ SD RIDTYRASGAGGQ+VN T+SAVRITHIP
Sbjct: 185 ESGGRIHTSTATVAVLPEVS-NVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIP 243

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIR 313
           TG+VV CQ ERSQ +NK QA N+LRA+L++L+L   E+   I  + K++IG G    +IR
Sbjct: 244 TGIVVTCQSERSQLQNKEQAMNILRARLFKLKL--EEQERKISSNRKSQIGTGERSEKIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +Y   P   V D R N    +   VLDG+LD+F+   + I 
Sbjct: 302 TYNF-PQNRVTDHRINYTSYNLQAVLDGELDEFITRLMRID 341


>gi|94502363|ref|ZP_01308828.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833646|ref|YP_001597842.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
 gi|94451077|gb|EAT14037.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206135|gb|ABS30445.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
          Length = 355

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 183/343 (53%), Gaps = 4/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L+     P +  +  +   L +E + +   I++    +++      +  L
Sbjct: 11  IEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIESL 70

Query: 76  ALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              + D  +L+      ++  ++LE   K+ E LL    ++N+  +E+ AG GG E+  +
Sbjct: 71  IKLDSDKELLEFAIFEKKKNLLELEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEACIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              + RMYT + ++  +K E L +  G   G K   + I+G N YG LK E GVHR+ R+
Sbjct: 131 VENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P  D +  I I  SD + +T+RASGAGGQHVN T+SA+R+T
Sbjct: 191 PSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIRLT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQI 312
           HIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL  K E+++   +S  +      +I
Sbjct: 251 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNEKLSKERKSLISTGDRSAKI 310

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N         ++G +++ + A   ++K
Sbjct: 311 RTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITALKILEK 352


>gi|187251505|ref|YP_001875987.1| peptide chain release factor 1 [Elusimicrobium minutum Pei191]
 gi|186971665|gb|ACC98650.1| Peptide chain release factor [Elusimicrobium minutum Pei191]
          Length = 358

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 183/351 (52%), Gaps = 19/351 (5%)

Query: 14  FDWDNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            D    ++    L  +      P       E +   +    L   +    E++       
Sbjct: 7   MDISKYLEEFKTLEAEMSSGNMPS-----EELQKKSKRHAFLRPIVEKGLELEAAQKGIK 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAG 126
              E+  +  D  + Q  ++ ++ +  ++   + E     +     DS   YLE+  GAG
Sbjct: 62  DAQEIIKDGSDKEMSQMAAEEMETLNAQIPVLEAELRVLVIPPDPNDSKSIYLELRPGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ES  +A  +LR+Y R+A+ + +KTE LE       G K A++ IKG  AY WL+ E G
Sbjct: 122 GDESSIFAAEMLRVYQRFADAKGWKTELLEYTPTGLKGCKYASMFIKGDGAYSWLRDESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +++ R HTS  ++ + P   + ++I+I+ +D  ++T RA GAGGQ+VN  
Sbjct: 182 THRVQRVPDTETSGRVHTSTITVAIMPEA-EEVDIQINPADIEMETCRAGGAGGQNVNKV 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVR+ H PTGVVV C++ERSQ  N+ +A NMLRAKLY++E +KR     I ++ K+++
Sbjct: 241 ETAVRLIHKPTGVVVSCREERSQGANRIKAMNMLRAKLYQMEEEKRN--KEIYDTRKSQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G G    +IR+Y   P   V D RT     + +++++G +++ +     ++
Sbjct: 299 GTGDRSEKIRTYNF-PQSRVTDHRTEKSYHNITEIMEGQIEEILNDLRTLR 348


>gi|257058120|ref|YP_003136008.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
 gi|256588286|gb|ACU99172.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
          Length = 370

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + R R  L+  +      +    + +   ++
Sbjct: 10  LQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAKQI 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +  +  ++ +  ++E  + +           D  +  LE+ AG GG E+
Sbjct: 70  LKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMPEV-DDVEVQIDAKDIEITTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + + P G+ + C +ERSQ +N+ +A  +LRAKLYEL+L  RE+   +    K+++G G 
Sbjct: 249 DLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYELKL--REQQDAVSSMRKSQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S +  L+GD+++ +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAGTLEGDIEEIIQSCISQDQ 352


>gi|27375329|ref|NP_766858.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
 gi|32171530|sp|Q89XT9|RF1_BRAJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27348465|dbj|BAC45483.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
          Length = 361

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 102/318 (32%), Positives = 157/318 (49%), Gaps = 9/318 (2%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLE 98
                + RE   +   I  +K  +  + +      L  +   D  +          +   
Sbjct: 30  ERYVQITRELAEITPLIEAVKTYRSAVKELADTEALIADPATDAEMRGMAEAERDELAPR 89

Query: 99  VEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +E      +   L     D  +  LE+ AG GG E+  +A  L RMY R+A  + +K E 
Sbjct: 90  IEDLVQKIRVALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEV 149

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +   +G   G K     ++G  A+  LK E GVHR+ R+   ++  R HTS +++ V P 
Sbjct: 150 ISASEGTVGGYKEIIAEVQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPE 209

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V + ++++I   D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV  Q  RSQHKN+A
Sbjct: 210 V-EDVDVDIKNDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRA 268

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A N+LR+++Y+ E Q+ +   +     K   G    +IR+Y   P   V D R N+   
Sbjct: 269 SAMNILRSRIYDAERQRVDAARSAERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 327

Query: 334 SPSDVLDGD-LDDFMKAT 350
               V+ G+ L + + A 
Sbjct: 328 KLPQVIAGEALGELIDAL 345


>gi|218245097|ref|YP_002370468.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
 gi|226739099|sp|B7K205|RF1_CYAP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218165575|gb|ACK64312.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
          Length = 370

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + R R  L+  +      +    + +   ++
Sbjct: 10  LQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAKQI 69

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +  +  ++ +  ++E  + +           D  +  LE+ AG GG E+
Sbjct: 70  LKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P V D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMPEV-DDVEVQIDAKDIEITTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + + P G+ + C +ERSQ +N+ +A  +LRAKLY+L+L  RE+   +    K+++G G 
Sbjct: 249 DLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKL--REQQDAVSSMRKSQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S +  L+GD+++ +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAGTLEGDIEEIIQSCISQDQ 352


>gi|320533186|ref|ZP_08033906.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134600|gb|EFW26828.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 340

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 113/327 (34%), Positives = 161/327 (49%), Gaps = 13/327 (3%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +    + L R    L   +S  +  Q    D   + ELA E++D          L+  +
Sbjct: 4   ADPGAMRRLGRRYAELGRVVSAYRAWQAASADLADVRELAAEDED---FAAEVPALETAE 60

Query: 97  LEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
                   E L      D+ D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L
Sbjct: 61  AAAGEHLREVLVPRDPDDARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVL 120

Query: 156 EIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           +  D +  G K   L IK           +  LK E GVHR+ R+   +S  R HTS + 
Sbjct: 121 DATDSDLGGYKDVRLAIKTRGPTEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAG 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P  DD  E++I  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+S
Sbjct: 181 VLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLR 327
           Q +NK  A  +LRA+L           A     S+   +    +IR+Y   P   + D R
Sbjct: 241 QLQNKEAAMRVLRARLLAERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHR 299

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T  +  +   VLDGDL   + + +A+ 
Sbjct: 300 TGFKAYNLDAVLDGDLGPVIASAIAMD 326


>gi|213622420|ref|ZP_03375203.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 240

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 142/234 (60%), Positives = 172/234 (73%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GG
Sbjct: 1   DVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGG 60

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GV
Sbjct: 61  TEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGV 120

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+
Sbjct: 121 HRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTE 180

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E+
Sbjct: 181 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMET 234


>gi|58038522|ref|YP_190486.1| peptide chain release factor 1 [Gluconobacter oxydans 621H]
 gi|81557234|sp|Q5FUR9|RF1_GLUOX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58000936|gb|AAW59830.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter
           oxydans 621H]
          Length = 353

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 172/346 (49%), Gaps = 8/346 (2%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   +  V R   +        L     +   L +E   L+  ++ I+  +        
Sbjct: 3   FDDRLERIVARSEEVQALMSSGELTG--EDFTRLSQEYAELEPVVASIQAWKSAEEQKAG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTES 130
              L  + +   + Q     ++    ++++  +   L    AD   A LE+   AGG E+
Sbjct: 61  AQALLDDPEMRELAQMELAEIEATLPDLQHALRLALLPKDAADERSAILEIRPAAGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L   Y R++E+  ++ E +E  + E AG+K     I G + +  LK E GVHR+
Sbjct: 121 GLFAAELFDAYRRFSEQNGWRFEVMEYAENEVAGLKEGMATISGRSVFARLKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P   + +++ +++ D RID YRASGAGGQHVN T+SAV
Sbjct: 181 QRVPATESQGRIHTSTVTVAVLPEA-EEVDVTVNDDDLRIDVYRASGAGGQHVNKTESAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           R+TH+P+G+VV  Q+E+SQHKNKA+A  +LRA+LYE E  +          S+   G   
Sbjct: 240 RVTHMPSGIVVAMQEEKSQHKNKAKAMKILRARLYERERAQLHATRAADRKSQVGTGDRS 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+       ++ G+ D+ + A    ++
Sbjct: 300 ERIRTYNF-PQGRVTDHRINLTLYKIDRIMGGEFDEIIDALTREEQ 344


>gi|194477029|ref|YP_002049208.1| peptide chain release factor 1 [Paulinella chromatophora]
 gi|171192036|gb|ACB42998.1| peptide chain release factor 1 [Paulinella chromatophora]
          Length = 366

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 165/346 (47%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A +    L  +  DP +  N  + +   RE   L+  +   K ++         + L
Sbjct: 10  LETATRTFENLERQLADPDVAVNPDQLQKFAREHSRLEPIVIDSKALKQAQKQREEAILL 69

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +D  +    ++ +  +   +E          L     D     LE+ +G GG E+
Sbjct: 70  LREHRNDPEMEALANEEIGALDEVIERLTKQLTLALLPRDSRDERSVMLEIRSGTGGGEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++   ++ +AL   + E  G +   L I+G   Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYSQSVGWQVQALSSSEAELGGFRELILAIRGEGVYSKLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DKVEVQLDPKDIEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL E +L +     +    ++   G   
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERQLAEAAAAESSARKAQVGTGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R   +  S   +L+G+L++ +   +A+ +
Sbjct: 309 EKIRTYNYKD-NRTTDHRLG-QNFSLDSILNGNLEEIIDTCIALDQ 352


>gi|170781877|ref|YP_001710209.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189039963|sp|B0RAQ5|RF1_CLAMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169156445|emb|CAQ01593.1| peptide chain release factor 1 (RF-1) [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 359

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 171/341 (50%), Gaps = 10/341 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++    L  +  DP L  +   ++ + R    L   ++   E      D     ELA 
Sbjct: 7   QLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAARELA- 65

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            E+D + + E     +++    E  +   +     D+ D  +E+  G GG ES  +A  L
Sbjct: 66  -EEDPAFVDEIPGLEEQLDQAQEKLRRLLIPRDPDDARDVIMEIKMGEGGAESALFAADL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP------NAYGWLKGEQGVHRLV 191
           LRMY  +AE R++KTE L     +  G K   + IKG         +  LK E GVHR+ 
Sbjct: 125 LRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLKYEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P V++  E+ +  +D +ID YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPATESQGRIHTSAAGVLVIPEVEEVEEVPLDPNDLKIDVYRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +  A+    S+   +    
Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAVRRSQIRTMDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +IR+Y   P   + D RT  +  +   V+DG LD  +++ +
Sbjct: 305 RIRTYNF-PENRIADHRTGYKAYNLDAVMDGALDPVVESCI 344


>gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1134

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 119/340 (35%), Positives = 179/340 (52%), Gaps = 13/340 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHL-WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           + A +R   L      P      VIEA    +E   LD  +     ++    +   L EL
Sbjct: 549 EAATKRHDELIALISAPDAAIDRVIEA---NKELARLDPLVKQYSMVKSLRDERESLDEL 605

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
           A   D+  I +   + L+ I  ++  ++       L   +AD   A LEV AGAGG E+ 
Sbjct: 606 ARTSDEKDITELAREELRAIDAKLPEQEHALRIMLLPRDDADDRGAILEVRAGAGGDEAA 665

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY   A K  ++ E L + + +  GI+  +  + G   +G LK E GVHR+ 
Sbjct: 666 LFAAELFRMYALHARKSGWRFETLNMSETDGKGIREGSAEVLGDGVFGRLKFESGVHRVQ 725

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   + ++++I + D RI+T RASGAGGQHVNTT+SAVR
Sbjct: 726 RVPETETQGRVHTSTASVAVLPHAAE-VDMDIRDEDVRIETMRASGAGGQHVNTTNSAVR 784

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
           +TH+PTG+ V  Q ERSQHKNKA+A+++L+++LY++E +K   E A +  S         
Sbjct: 785 LTHLPTGITVAIQDERSQHKNKAKAFSVLKSRLYDMEREKLANERAELRSSLIGTGDRSE 844

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD-LDDFMK 348
           ++R+Y   P   VKD R            +DG  LDD + 
Sbjct: 845 KVRTYNF-PQGRVKDHRVDGNVSGDIKGFMDGFLLDDLVD 883


>gi|168056816|ref|XP_001780414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668174|gb|EDQ54787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 362

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 124/355 (34%), Positives = 188/355 (52%), Gaps = 21/355 (5%)

Query: 11  GGLFDWDNAVQRLSF-LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            G+   ++   RL+  L+     P       E   L +E   L++ ++ I  +++   + 
Sbjct: 7   RGMLAIEHRHSRLNQALSESAACPD------EIIRLSKELSKLEDLMACITSLKNTRKEI 60

Query: 70  LILLELALEE-DDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAG 124
             L  L  E  +D  + Q  ++ L+ +      +++      L   EADS    LEV AG
Sbjct: 61  EGLKMLIEESAEDEDMKQAAAEELRSVSNLETEDLQRMLLLMLPKDEADSRGCILEVRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +A+ + RMY R+A+K+ +  E L I      G K A+  I G   YG LK E
Sbjct: 121 TGGDEASLFASDIFRMYERYAQKKLWSFEVLSITQTNSKGYKEASASITGDGVYGKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   + + R HTS +S+ V P   D +++++   D RIDTYRA GAGGQH N
Sbjct: 181 SGVHRVQRVPVTEKSGRVHTSAASVAVLPQA-DEVDVQMRNEDLRIDTYRAGGAGGQHAN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTG+V+  Q ERSQH N+A++  +LRAKL+E E    ++          
Sbjct: 240 TTSSAVRVTHLPTGIVIAIQDERSQHMNRAKSLKLLRAKLFERERM--QQAMARSTLRLE 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           +IG G    +IR+Y   P   V D R NI + S   ++ G+ LD F+ A L +K+
Sbjct: 298 QIGSGDRSERIRTYNF-PQGRVTDHRVNITQHSIVQIMQGEGLDGFIDA-LTMKQ 350


>gi|68171151|ref|ZP_00544559.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999421|gb|EAM86062.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 221

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 131/220 (59%), Positives = 168/220 (76%), Gaps = 1/220 (0%)

Query: 136 MLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ML RMY RWAE    FKTE +   DGEE G+KSAT+ + G NAYGW K E G+HRLVRIS
Sbjct: 1   MLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRIS 60

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P++SN++RHT+FSSI V PV+++   IEI + D RIDTYRASGAGGQHVN T+SAVRITH
Sbjct: 61  PFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITH 120

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IP+G+VVQCQ  RSQH+N A+A N+L+++LY+L+LQ++E+      + +  IGWG QIRS
Sbjct: 121 IPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRS 180

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV+ PYQMVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 181 YVMHPYQMVKDIRTGHEIGNVNSVLDGNLDSFIISALTTK 220


>gi|313678884|ref|YP_004056624.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
 gi|312950243|gb|ADR24838.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
          Length = 358

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 170/343 (49%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                Q    L  K +DP +  N+ E   + +E   +          ++ L D      +
Sbjct: 9   LSEIKQSYLELLKKVDDPAVINNIKEYSAINKEIAKIREISEKFITYENLLKDVEQAKLM 68

Query: 76  ALEEDDCS--ILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              + D      +   D    +++   E  +   L   E D  +  +E+   AGG E+  
Sbjct: 69  LESKSDEEVEFAKMIIDENSLKLEELEEKLKILILPQDENDDKNIIVEIRGAAGGDEANI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++A++  F+ + L  +     G       IKG  AY   K E GVHR+ R
Sbjct: 129 FAGDLFRMYNKFADELGFRLKILSTNSANAGGFSQIVFSIKGEKAYSKFKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P +DD+++IEI  SD +ID +R+SGAGGQ VNTTDSAVRI
Sbjct: 189 VPVTESQGRIHTSTTTVTVMPEIDDTVDIEIKPSDLKIDVFRSSGAGGQSVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+QK+ +  +             +I
Sbjct: 249 THLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKADEESGYRKLAGHGDRSEKI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R +   +    +++G L   ++A LA ++
Sbjct: 309 RTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIVEALLAEEQ 349


>gi|301629497|ref|XP_002943876.1| PREDICTED: peptide chain release factor 1-like [Xenopus (Silurana)
           tropicalis]
          Length = 460

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 4/274 (1%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
           +  +  ++L  I++     + + LL      D+ +A+LE+ AG GG ES  +A  L R+Y
Sbjct: 176 LAGQLFEDLGEIRVLFLENELQRLLLPKDPDDARNAFLEIRAGTGGDESALFAGDLARVY 235

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TR+A    ++ E +  ++ E  G K   L I+G + YG L+ E G HR+ R+   ++  R
Sbjct: 236 TRYAATVGWRVEIMSANESELGGYKEVVLRIEGDHVYGALRFESGGHRVQRVPATETQGR 295

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N TDSAVR+ HIPTG+V 
Sbjct: 296 IHTSACTVAVMPEPDEQQAIMLNPADLRIDTFRASGAGGQHINKTDSAVRVVHIPTGIVA 355

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPY 320
           +CQ  RSQH NKA+A  +L+A++ + E  +R    A +            +IR+Y   P 
Sbjct: 356 ECQDGRSQHSNKAKALQVLQARIQDKERSERAAKEAAVRRGLIGSGDRSDRIRTYNF-PQ 414

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               D R N+       +++GDL + ++A    +
Sbjct: 415 GRFTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 448


>gi|119383645|ref|YP_914701.1| peptide chain release factor 1 [Paracoccus denitrificans PD1222]
 gi|166223583|sp|A1B0G1|RF1_PARDP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119373412|gb|ABL69005.1| bacterial peptide chain release factor 1 (bRF-1) [Paracoccus
           denitrificans PD1222]
          Length = 351

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 179/346 (51%), Gaps = 20/346 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
             V+R  +L  +    P       E   + RE   L   ++ I + +    D      + 
Sbjct: 9   QIVERFEYLEARLNAGPA----AEEIAAISREYAELKPVVAQIAQWRSVQEDIRQAQAML 64

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQD 132
               D  + +   D L R++  +   +       L    AD+  A LE+  G GG E+  
Sbjct: 65  A---DHEMRELAQDELSRLRAGLPALEHALRVALLPRDAADARPAILEIRPGTGGEEAAL 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LL MY R+AE + ++ + LE+   +  G++ A   I+G   +  LK E GVHR+ R
Sbjct: 122 FAGDLLDMYRRFAESQGWQFQMLELVRSDLGGVREAMARIEGEGVFARLKYESGVHRVQR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++++I  +D RIDT RASGAGGQHVNTTDSAVRI
Sbjct: 182 VPETESGGRIHTSAATVAVLPEA-EEVDVDIPAADIRIDTMRASGAGGQHVNTTDSAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV    E+SQH+N+A A  +LRA+LY++E  +    A      K+++G G   
Sbjct: 241 THLPTGIVVTSS-EKSQHQNRANAMAVLRARLYDMERSR--ADAERAADRKSQVGSGDRS 297

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R  +   +   ++ G++ + ++A  A  +
Sbjct: 298 ERIRTYNF-PQGRMTDHRIGLTLYALDRIMQGEIGEIVEALAAHDQ 342


>gi|13508100|ref|NP_110049.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
 gi|2500138|sp|P75420|RF1_MYCPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1674166|gb|AAB96123.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
          Length = 359

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 176/347 (50%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+    L      P L    I+A  + +E +H    +   KE +  +   L    +
Sbjct: 11  VEKIVELAEQLEKDLNKPDLTFEQIKA--INKELKHKQPLVVKFKEFKRLIDQALEAEAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +   +  E    L+R++  V    E  +   L   E +  +  +E+   AGG ES 
Sbjct: 69  LENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L  MY  +   + +K +  E+      G+   +  + G + +  LK E GVHR+ 
Sbjct: 129 IFLADLFNMYRNFCSNKGWKLQINEMIPSSV-GLNFVSFEVNGVDVFAKLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +++E+ I+ +D R+DTYRASGAGGQHVN T+SAVR
Sbjct: 188 RVPATESKGRVHTSTVTVAVLPQL-EAVEVHINPADLRVDTYRASGAGGQHVNRTESAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ+ +SQ  N+  A  MLRAKL+  E  + E+++      K+++G G  
Sbjct: 247 ITHLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +     + ++ GDLD+ ++A  A +K
Sbjct: 305 AEKIRTYNY-PQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEK 350


>gi|307265645|ref|ZP_07547198.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919289|gb|EFN49510.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 246

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 104/236 (44%), Positives = 152/236 (64%), Gaps = 7/236 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   ++  R HTS +++ V P V + +++EI+ SD +ID +R+ G 
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEV-EEVDVEINPSDIKIDVFRSGGH 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I
Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMAL--QEQQREI 177

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E+ K+++G G +   IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 232


>gi|293977757|ref|YP_003543187.1| bacterial peptide chain release factor 1 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667688|gb|ADE35323.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Sulcia
           muelleri DMIN]
          Length = 352

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 107/338 (31%), Positives = 179/338 (52%), Gaps = 4/338 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L+     P +  +  +   L +E + +   I++    +++      +  L
Sbjct: 11  IEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIESL 70

Query: 76  ALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
                D  +L+      ++  ++LE   K+ E LL    ++N+  +E+ AG GG E+  +
Sbjct: 71  IKLSSDKELLEFAIFEKKKNLLELEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEACIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              + RMYT + ++  +K E L +  G   G K   + I+G N YG LK E GVHR+ R+
Sbjct: 131 VENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P  D +  I I  SD + +T+RASGAGGQHVN T+SA+R+T
Sbjct: 191 PSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIRLT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQI 312
           HIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL  K E+++   +S  +      +I
Sbjct: 251 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNEKLSKERKSLISTGDRSAKI 310

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R N         ++G +++ + A 
Sbjct: 311 RTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITAL 347


>gi|162147699|ref|YP_001602160.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542323|ref|YP_002274552.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|189039975|sp|A9HJ50|RF1_GLUDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161786276|emb|CAP55858.1| putative peptide chain release factor 1 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530000|gb|ACI49937.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 352

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 167/345 (48%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   L     +  +           RE   L+  +  I E++    +      L
Sbjct: 7   LDRIVARSEELQAALAEGLV---GEAFAKASREYAELEPIVDRIGELRLAEQEERQSQAL 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +     L+ ++  +    +  +   L   EAD   A LE+   AGG E+ 
Sbjct: 64  LA---DPEMRELAEAELEDLRARIPVLRQDIRIAMLPRDEADERSAILEIRPAAGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L   Y R+A  R ++ E +E  + E  G++     I G   +  LK E GVHR+ 
Sbjct: 121 LFAAELFDAYRRYAALRGWRFEIMEFDESELGGLREGIANITGRGVFARLKYESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   D ++++I++ D RID YRASGAGGQHVN T+SAVR
Sbjct: 181 RVPATESQGRIHTSTVTVAVLPEAGD-VDVQINDGDLRIDVYRASGAGGQHVNKTESAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q+E+SQHKN+A+A  +L A+LYE E             S+   G    
Sbjct: 240 ITHLPTGLVVAMQEEKSQHKNRAKAMKILMARLYERERAAAHATRAADRKSQVGTGDRSE 299

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+ G+ D+F+ A    ++
Sbjct: 300 RIRTYNF-PQGRVTDHRINLTAYKIDRVMMGEFDEFVDALTQDEQ 343


>gi|159475365|ref|XP_001695789.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158275349|gb|EDP01126.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 383

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 179/342 (52%), Gaps = 14/342 (4%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--D 80
              L  +  DP +  +  E + + +    L+  ++  +  QD         +   EE   
Sbjct: 34  FKELQMRMADPEVAASATEFQKVAKAASDLETTVNTYRAYQDTEQQLADAQKYLKEEASS 93

Query: 81  DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + +   + +  ++  +   Q     + +     D  +  LE+ AGAGG E+  WA  
Sbjct: 94  DPEMAEFAREEIAELEASLTKLQDALRLQLVPRDPLDDRNIMLEIRAGAGGDEASIWAGD 153

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+RMY R+A K+ +K   +     E  G K   L I G + Y  LK E GVHR+ R+   
Sbjct: 154 LMRMYQRYANKQGWKASLVSCTQAEAGGYKEIILQINGDSVYSKLKWEAGVHRVQRVPAT 213

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P V + +++ ++ +D  +   RASGAGGQ+VN  ++AV + H P
Sbjct: 214 EAAGRVHTSTATVAVMPEV-EEVDVALNMNDIDLKFARASGAGGQNVNKVETAVDLMHKP 272

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V CQ+ER+Q +NK +A+ +LRAKLYELEL  + + A I  + K+++G G    +I+
Sbjct: 273 TGIRVFCQEERTQAQNKERAFQILRAKLYELEL--QRQQAEIYAARKSQVGTGDRSEKIK 330

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y  +    V D R  +     + +++GDL+D ++A ++  +
Sbjct: 331 TYNYKDS-RVSDHRIKM-NFDLNSIIEGDLEDTLQAMISADQ 370


>gi|126642199|ref|YP_001085183.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
          Length = 296

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 103/275 (37%), Positives = 152/275 (55%), Gaps = 6/275 (2%)

Query: 81  DCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D        + +Q  K  +E  + +     +     DSN AYLE+ AG GG E+  ++  
Sbjct: 5   DPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFSGD 64

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+   
Sbjct: 65  LFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVPAT 124

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITHIP
Sbjct: 125 ESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITHIP 184

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSY 315
           TG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +         G    +IR+Y
Sbjct: 185 TGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSERIRTY 244

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              P   + D R N+       +++GDL + + + 
Sbjct: 245 NY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 278


>gi|84494539|ref|ZP_00993658.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
 gi|84384032|gb|EAP99912.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
          Length = 360

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 170/346 (49%), Gaps = 12/346 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   Q  + L  +  DP +  +  + + + +    L   ++     Q    D     ELA
Sbjct: 6   EVLAQEHATLEREMGDPAIASDPDKLREINKRYAALGPTVAAYAAWQLATDDLEAARELA 65

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E  D     E            +  +   +     D  D  +EV AG GG ES  +A  
Sbjct: 66  TE--DAGFAAEVPALETSANDAADRLRRLLIPRDPDDDRDVIVEVKAGEGGEESALFAGD 123

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHR 189
           LLRMY R+AE+R ++TE L   + +  G K   + +K       G   +  LK E GVHR
Sbjct: 124 LLRMYLRYAERRGWRTEVLGSTETDLGGFKDVQVSVKSKKAPLPGEGPWARLKYEGGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS + +WV P   + +E+EI  +D RID +R+SG GGQ VNTTDSA
Sbjct: 184 VQRVPITETQGRIHTSAAGVWVMPEA-EEVEVEIHANDLRIDVFRSSGPGGQSVNTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGW 308
           VR+TH+PTG VV CQ E+SQ +N+  A  +LRA+L+++ + +     A+I  S    +  
Sbjct: 243 VRLTHLPTGTVVICQNEKSQLQNREAAMRVLRARLHQMAMDEANAASADIRASQVRTVDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y       + D RT  +  +   VL G+LD  +++ +   
Sbjct: 303 SERIRTYNFAE-NRISDHRTGFKAYNLDTVLGGELDAVVESAMTAD 347


>gi|301633339|gb|ADK86893.1| peptide chain release factor 1 [Mycoplasma pneumoniae FH]
          Length = 359

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 176/347 (50%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+    L      P L    I+A  + +E +H    +   KE +  +   L    +
Sbjct: 11  VEKIVELAEQLEKDLNKPDLTFEQIKA--INKELKHKQPLVVKFKEFKRLIDQALEAEAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +   +  E    L+R++  V    E  +   L   E +  +  +E+   AGG ES 
Sbjct: 69  LENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L  MY  +   + +K +  E+      G+   +  + G + +  LK E GVHR+ 
Sbjct: 129 IFLADLFNMYRNFCTNKGWKLQINEMIPSSV-GLNFVSFEVNGVDVFAKLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + +++E+ I+ +D R+DTYRASGAGGQHVN T+SAVR
Sbjct: 188 RVPATESKGRVHTSTVTVAVLPQL-EAVEVHINPADLRVDTYRASGAGGQHVNRTESAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ+ +SQ  N+  A  MLRAKL+  E  + E+++      K+++G G  
Sbjct: 247 ITHLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +     + ++ GDLD+ ++A  A +K
Sbjct: 305 AEKIRTYNY-PQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEK 350


>gi|87309295|ref|ZP_01091431.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
 gi|87287934|gb|EAQ79832.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
          Length = 358

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 174/348 (50%), Gaps = 14/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R  FL  +  DP +  N  +   + RE   L    +  +  ++ + +     EL
Sbjct: 5   LEEKLSRFEFLEKQMSDPDVMGNSHQMATIAREHGSLAKLATKYRTFKNTIDEMGEAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSND--AYLEVHAGAGGTESQ 131
            LE DD  + +  + ++  +K + E    +   +  G  D+N     LE+  GAGG E+ 
Sbjct: 65  -LESDDEEMCELAAADIVTLKAKREKLWQELLDMTIGGDDANRTRIVLEIRGGAGGDEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+AE +K+K E +E +  E  G K   + ++G   Y  L+ E G HR+ 
Sbjct: 124 LFARDLYEMYKRYAETKKWKYEVMEANPTELGGFKEVIISVEGEGVYRELQYESGGHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAV 250
           R+   ++  R HTS +++ V P   + +E E++  D  ++ Y  +SG GGQHVN T SAV
Sbjct: 184 RVPETEAKGRVHTSAATVAVMPEP-EDVEFELNPEDYEVERYAASSGPGGQHVNKTASAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+ H   GV+VQC +ERSQHKN A+A  +L+ KLYE++    EE     +  K+ +G G 
Sbjct: 243 RLIHKD-GVIVQCCEERSQHKNLAKALRLLKTKLYEVKR--AEEEKQRSDHRKSLVGSGD 299

Query: 311 ---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       ++ G +   +   +   +
Sbjct: 300 RSQRIRTYNF-PENRVTDHRINLTLYKLDQIIAGAIQPVIDGLVDYDR 346


>gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of E.Coli 70s Ribosome Bound With
           Rf1
          Length = 333

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 122/328 (37%), Positives = 185/328 (56%), Gaps = 22/328 (6%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++     I+ I +R+ +    +EL           E 
Sbjct: 11  LLARPDLT--PEQMKNYGMEYAKIEE----IENITNRIKETQEFIELLR------EEGEN 58

Query: 89  SDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
              +++ + E++    +   LLS EA S+ A +E+  G GG E+  +A  L RMYTR+AE
Sbjct: 59  ELEIEKYEKELDQLYQELLFLLSPEA-SDKAIVEIRPGTGGEEAALFARDLFRMYTRYAE 117

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS 
Sbjct: 118 RKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTST 177

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P +++  +IEI   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ E
Sbjct: 178 ATVAVLPEIEEK-DIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNE 236

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           RSQ++NK  A  +LRA+LY+L+  K ++   I +  K++IG G    +IR+Y   P   V
Sbjct: 237 RSQYQNKQTALRILRARLYQLQ--KEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRV 293

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            D R N       ++LDGDLD+ +   +
Sbjct: 294 TDHRINYTSYRLQEILDGDLDEIISKLI 321


>gi|209883257|ref|YP_002287114.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
 gi|229470351|sp|B6JA06|RF1_OLICO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209871453|gb|ACI91249.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
          Length = 358

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 168/345 (48%), Gaps = 18/345 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + L  +     L Q N        RE   L   +  +K  +    +   L  
Sbjct: 7   LDILLARHAALEAEL----LGQLNAEAYVRATRELAELTPVVDAVKAYRAGASELSDLDA 62

Query: 75  LALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTE 129
           +  +   D  +          ++   E  +       L     D  +  LEV AG GG E
Sbjct: 63  MIDDPTTDAEMRAMAESERPVLQERQENLEQQIRIALLPKDAMDERNVVLEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR
Sbjct: 123 ASLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQGRGAFAKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +++ R HTS +++ V P   + I+I+I ++D RI+T RA GAGGQHVN T+SA
Sbjct: 183 VQRVPDTEASGRIHTSAATVAVLPEA-EEIDIDIKDTDLRIETMRAQGAGGQHVNKTESA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITHIPTG+VV  Q  RSQHKN+A A N+LR+++ + E   +   +      + ++G G
Sbjct: 242 IRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRILDAER--QRAASERSADRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
               ++R+Y   P   V D R N+       V+ G+ L++ + A 
Sbjct: 300 DRSERVRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALNELIDAL 343


>gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
 gi|7388056|sp|Q9X183|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1
 gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8]
          Length = 342

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 122/328 (37%), Positives = 185/328 (56%), Gaps = 22/328 (6%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++     I+ I +R+ +    +EL           E 
Sbjct: 11  LLARPDLT--PEQMKNYGMEYAKIEE----IENITNRIKETQEFIELLR------EEGEN 58

Query: 89  SDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
              +++ + E++    +   LLS EA S+ A +E+  G GG E+  +A  L RMYTR+AE
Sbjct: 59  ELEIEKYEKELDQLYQELLFLLSPEA-SDKAIVEIRPGTGGEEAALFARDLFRMYTRYAE 117

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS 
Sbjct: 118 RKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTST 177

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P +++  +IEI   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ E
Sbjct: 178 ATVAVLPEIEEK-DIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNE 236

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           RSQ++NK  A  +LRA+LY+L+  K ++   I +  K++IG G    +IR+Y   P   V
Sbjct: 237 RSQYQNKQTALRILRARLYQLQ--KEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRV 293

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            D R N       ++LDGDLD+ +   +
Sbjct: 294 TDHRINYTSYRLQEILDGDLDEIISKLI 321


>gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
 gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
          Length = 362

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 103/339 (30%), Positives = 163/339 (48%), Gaps = 12/339 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D       
Sbjct: 6   LAALLDEYADLEKRLADPAIHADQNMARRVGRRYAELVPLHKAASELEQARADLAAAK-- 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            L  +D + + E       +    E      +     D+ D  +E+ AG GG ES  +A 
Sbjct: 64  ELAAEDPAFVGEAEAMAAALPALEEGLAELLIPRDPHDAKDVIVEIKAGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVH 188
            LLRMYTR+AE+  +  E ++  D +  G+K  +L IK       G   +  LK E GVH
Sbjct: 124 DLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + + P   + +++ I  ++ RID +R+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLMLPEA-EEVDVTIDPNELRIDVFRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIG 307
           AVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L  +  ++ +  A+    +    + 
Sbjct: 243 AVRITHLPTGIVVSCQNEKSQLQNREQALRILRARLLAVAQEQADAAASDARKAQVRTVD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              +IR+Y   P   + D R      +    L G+LD  
Sbjct: 303 RSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|78185551|ref|YP_377985.1| peptide chain release factor 1 [Synechococcus sp. CC9902]
 gi|119361629|sp|Q3AW64|RF1_SYNS9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78169845|gb|ABB26942.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp.
           CC9902]
          Length = 365

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 165/346 (47%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A      L  +  DP +  +    + + RER  L+  +   + +Q    +     EL
Sbjct: 10  LQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQADAREL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D ++ +   D L  ++ +    ++      L     D     LE+ AGAGG E+
Sbjct: 70  LRESRSDAAMQELAQDELSELEAQHTALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + L   + +  G +   + +KG + +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGTSVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+E+   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DAVEVELDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL E EL    E  ++   S        
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAAAERESSHRRSQVGSGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R      S   VL G L+D + A +A ++
Sbjct: 309 EKIRTYNYKD-NRTTDHRLG-RNFSLEPVLQGQLEDLIGACIAEEQ 352


>gi|296533064|ref|ZP_06895708.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
 gi|296266608|gb|EFH12589.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
          Length = 351

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 115/349 (32%), Positives = 175/349 (50%), Gaps = 28/349 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKEIQDRL---CDNL 70
            D  + R   L    E          A+   L +E   L+  ++ ++ ++       +  
Sbjct: 7   LDRLLYRADELRALLET------AEGAQVGALAKELSELEPLVAQVEALRAAERARDEAE 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAG 126
            LL       D  + +         +  V       +   L    AD+  A LE+   AG
Sbjct: 61  ALL------ADPEMRELAEAEYYAQRDAVPVLERELRLMLLPKDAADAGSAILEIRPAAG 114

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L   Y ++A  R ++   L+  + E  GIK A   ++G   +  LK E G
Sbjct: 115 GDEAGLFAAELFAAYQKYAAARGWRFGVLDYDESELGGIKGAVAEVEGQGVFARLKFESG 174

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ V P   + ++++I+ESD RIDTYRASGAGGQHVN T
Sbjct: 175 VHRVQRVPATETQGRIHTSTVTVAVLPQA-EDVDVQINESDLRIDTYRASGAGGQHVNKT 233

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG VV  Q+ERSQHKN+A+A  +LRA+LYE +    + +A+     + ++
Sbjct: 234 DSAVRITHIPTGTVVAMQEERSQHKNRAKAMKVLRARLYEAQRS--QAVASRSADRRAQV 291

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G G    +IR+Y   P   V D R  +       V+ G++DD + A +A
Sbjct: 292 GTGDRSERIRTYNF-PQGRVTDHRIGLTLHKIDRVMQGEMDDIIDALIA 339


>gi|219119372|ref|XP_002180448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407921|gb|EEC47856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 358

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 170/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +    L  +  DP +  +    + +M +R  ++  +   +E      +     EL
Sbjct: 5   LDGIRRSYQALTERLADPDVINDSNLLRQVMTDRSQIEEVVMVFEEYVALQEELSGAKEL 64

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +  DD  + +   D ++ I+ +++  +       L     D+ +  LE+ AG GG+E+
Sbjct: 65  FQDAGDDPDMKEMARDEMKAIEPQLDSLEEKIKVLLLPKDPNDARNVMLEIRAGTGGSEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL +Y ++   + +++  ++   G++ G K+  L IKG   Y  LK E GVHR+
Sbjct: 125 NIFAGDLLDVYRKYISTQGWQSNLIDSSSGDDGGYKNVVLDIKGDMVYSKLKWEAGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   D ++I+I   +  + T R+ GAGGQ+VN  ++AV
Sbjct: 185 QRVPATESQGRVHTSTATVAIMPEC-DEVDIKIDPKEIEMSTMRSGGAGGQNVNKVETAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
            + H PTG+ ++C QERSQ KNK  A  ML AKLY++E +KRE E      S     G  
Sbjct: 244 DLLHKPTGIRIKCTQERSQLKNKELAMKMLMAKLYDMENEKREMEERARRGSQVGTGGRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R   +    +  L GD+     + +A  +
Sbjct: 304 EKIRTYNWKDS-RCSDHRLG-QNFPLAQFLSGDIGSMHDSMIAKDQ 347


>gi|297567138|ref|YP_003686110.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
 gi|296851587|gb|ADH64602.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
          Length = 364

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 169/344 (49%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  Q    L     DP +  +  E + L +    +   ++ I+E +    D      L
Sbjct: 5   LESLEQEYQSLEASLADPAVLSDQREYQRLSKRYAEMGELVATIREYKKAHSDLEEAKSL 64

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +   + ++R I       +   L     D  +  +E+ AG GG E+  +A
Sbjct: 65  LHDPDMAEMARLEVEEIRRRIPELEAKLELLLLPKDPLDDKNVIVEIRAGTGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  M   +A ++ F+TE L+++  +  G+   +  + G  AYG LK E GVHR+ R+ 
Sbjct: 125 AELRDMIMEFARRKGFRTEILDVNLTDLGGVSKVSFEVIGAGAYGVLKYEAGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +++E+  +D  I   RASG GGQ VNTTDSAV++ H
Sbjct: 185 ATEAQGRIHTSTATVAVMPEA-EEVDVELDPADLEITVSRASGPGGQGVNTTDSAVQVLH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311
            PTG++V C + RSQ KNK +A  +LR++L  LE+++ EE A   E    +IG      +
Sbjct: 244 KPTGMIVSCMESRSQIKNKEKALTILRSRL--LEMKRAEEAARRREDRLAQIGAGERSEK 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R      +   VL GDL +  +A     +
Sbjct: 302 IRTYNF-PQSRVTDHRIGFTTHNLEGVLSGDLFELHEALKRADQ 344


>gi|13357561|ref|NP_077833.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762199|ref|YP_001752083.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920085|ref|ZP_02690833.2| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508605|ref|ZP_02689678.2| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701604|ref|ZP_02553446.2| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|13124459|sp|Q9PRE0|RF1_UREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039997|sp|B1AHY9|RF1_UREP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|11277784|pir||D82945 translation releasing factor RF-1 UU003 [imported] - Ureaplasma
           urealyticum
 gi|6898949|gb|AAF30410.1|AE002100_3 peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|168827776|gb|ACA33038.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902439|gb|EDT48728.1| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182676062|gb|EDT87967.1| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700834|gb|EDU19116.1| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 359

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 175/362 (48%), Gaps = 19/362 (5%)

Query: 1   MKLSRQL-NCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           M+ +++L   +  +    D   + L           +  +  + K +  + +        
Sbjct: 1   MEYNKKLYEAIERVAIKNDALKKELE---------TVVTDFKKIKEINIQLKKTTKIAEA 51

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADS 114
             + + +L   +   ++   E D  +++    +L   K+ +       +   L +   D 
Sbjct: 52  FAKYKQKLDTGIAAEKILNTEKDLELIELAQMDLDEAKINIPIIENDLKIMLLPTDPNDD 111

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            +  +E+   AGG ES  +   L   Y  +AE   +K + +E+      G    + +I G
Sbjct: 112 KNVIVEMRPAAGGDESSIFVGNLFDTYRAYAENNNWKMKIIEMTPN-AVGFSFISFMISG 170

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
              Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D +++ I+ ++ RIDTYR
Sbjct: 171 EEVYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLPE-QDEVDVVINPTELRIDTYR 229

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIPTGVV  CQ+ +SQ +N+  A  MLRAKL+E   +++  
Sbjct: 230 ASGAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNA 289

Query: 295 I-ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             AN+ ++         +IR+Y   P   V D R N+       ++ G+LD+ + A +A 
Sbjct: 290 EFANLRKNQVGTGDRSEKIRTYNY-PQNRVTDHRINLTLNKLDQIMMGELDEIIDALIAD 348

Query: 354 KK 355
           ++
Sbjct: 349 EQ 350


>gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium sp. P08]
          Length = 361

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 176/345 (51%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +  +  +P +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
           A E  D   +QE      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  ANE--DPVFVQEAER--LRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  +D R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL + + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 347


>gi|87300884|ref|ZP_01083726.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
 gi|87284755|gb|EAQ76707.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
          Length = 367

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 16/355 (4%)

Query: 14  FDWDNAVQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
            D     +RL         L  +  DP +  +  E + L +ER  L+   + +   Q   
Sbjct: 1   MDPSLLRERLEAADRTFQALERQLADPAVAADPSELRRLSKERARLEPLATGLGHWQSLQ 60

Query: 67  CDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121
                  +LA +   D  +     + L+ +  +++  +       L S   D     LE+
Sbjct: 61  RQLKEAQQLARQSKGDPEMEALIQEELRELGAQLDGLEQQLTLALLPSDPRDERSVMLEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  WA  L RMY R+A+   +  + L   + +  G K   L I+G   Y  L
Sbjct: 121 RAGTGGDEAALWAGDLARMYERFAQTVGWSVQPLSASESDLGGFKELILAIRGDGVYSQL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS +++ V P   D +E+++  +D  I T R+ GAGGQ
Sbjct: 181 KYEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVEVQLDPADLDISTARSGGAGGQ 239

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKL E EL +     +    
Sbjct: 240 NVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERELAEAAAAESSARR 299

Query: 302 SKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++   G    +IR+Y  +    V D R      +   VL G L + + A +A ++
Sbjct: 300 AQVGSGERSEKIRTYNAKD-NRVTDHRLG-RNFALEPVLQGQLAEVIGACVAAEQ 352


>gi|256751358|ref|ZP_05492237.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749740|gb|EEU62765.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 246

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 102/236 (43%), Positives = 152/236 (64%), Gaps = 7/236 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   ++  R HTS +++ V P V + +++EI+ +D +ID +R+ G 
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEV-EEVDVEINPNDIKIDVFRSGGH 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L  +E+   I
Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMAL--QEQQREI 177

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            E+ K+++G G +   IR+Y   P   V D R  +      +VLDGDLD+ + A +
Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 232


>gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 335

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 116/308 (37%), Positives = 166/308 (53%), Gaps = 17/308 (5%)

Query: 37  QNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
            N   A+ L RE   L      I  ++ I+  L D L+++E A E  D  +L+       
Sbjct: 28  ANSELAQ-LARELSELRPICDQIELVRRIEAELADALLMVEEAGE--DADMLEMVQAEAG 84

Query: 94  RIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +K  +       Q   L   + D+ +A LEV AG GG E+  +A+ L  MY R+A K  
Sbjct: 85  LLKTRLPEAHSALQIMLLPKDKDDARNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHG 144

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E +E+ +    G K AT  I G + +  LK E GVHR+ R+   ++  R HTS +++
Sbjct: 145 WNFEVMEVSETGIGGYKEATATISGNDVFARLKFESGVHRVQRVPETEAGGRIHTSAATV 204

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P   + ++I I ESD R+D +RASG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ
Sbjct: 205 AVLPEA-EDVDIRIDESDLRVDVFRASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQ 263

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326
           HKN+A+A  +LRA++Y+ E  + E  A      K ++G G    +IR+Y   P   V D 
Sbjct: 264 HKNRAKAMKILRARIYDAERARVE--AQRAAERKGQVGSGDRSERIRTYNF-PQGRVTDH 320

Query: 327 RTNIEKTS 334
           R N     
Sbjct: 321 RINFTLYK 328


>gi|195650889|gb|ACG44912.1| peptide chain release factor 1 [Zea mays]
          Length = 356

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 124/343 (36%), Positives = 189/343 (55%), Gaps = 11/343 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-- 76
             QR ++L  +   P    +  E     +E + L++ +  IK+++ +  +   L  L   
Sbjct: 8   IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGLKSLVAN 65

Query: 77  --LEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D   + +E        +  ++++ F SLL   EAD  D  LEV AG GG E+  +
Sbjct: 66  DHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + RMY ++A+K  +K + ++I +    G K A+  I GP A+G LK E G+HR+ R+
Sbjct: 126 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ V P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 186 PATEKSGRMHTSAVSVAVLPQA-DEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQI 312
           HIPTG VV  Q ERSQH NKA+A  +LRA+LYELE ++   + + +            +I
Sbjct: 245 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSEQIGSGDRSERI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           R+Y   P   V D R  +   S +DV++G+ LD F+ A L  +
Sbjct: 305 RTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 346


>gi|317506166|ref|ZP_07963987.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255511|gb|EFV14760.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 354

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 126/345 (36%), Positives = 178/345 (51%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +     L  +  DP L ++V  AK + +    L        + +    D     EL
Sbjct: 5   LDELIAEYESLQERWADPSLQEDVAAAKKVGKRVAELAPIYEAHAQREAAQADLAAAHEL 64

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A  E D    +E  + L  RI    E            D  D  LEV AGAGG ES  +A
Sbjct: 65  A--ELDPEFAKEEVERLTGRISELDEELDELLAPRDPHDGEDVVLEVKAGAGGEESALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--------GPNAYGWLKGEQG 186
             L+RMYT++AE+R+++ E L I + +  G+K AT+ IK            + WLK E G
Sbjct: 123 GDLIRMYTKFAERRRWRVEVLSIAESDLGGVKDATISIKRTGGDQSPAQGVWAWLKHEGG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + +  YP  +D+ E+ I ES+ RID YR+SG GGQ VNTT
Sbjct: 183 VHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPEVVIDESELRIDVYRSSGKGGQGVNTT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L +L  +K    A  G   +   
Sbjct: 243 DSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQLREEKAAADAASGRKEQIRT 302

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +    +IR+Y   P   + D R   + ++   VL+GDL+  +   
Sbjct: 303 VDRSERIRTYNF-PENRIADHRIGYKASNLDMVLEGDLEPMLSEL 346


>gi|260906196|ref|ZP_05914518.1| peptide chain release factor 1 [Brevibacterium linens BL2]
          Length = 359

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 173/342 (50%), Gaps = 8/342 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +   + L ++  DP +  +   AK L R    LD      +       D     ELA 
Sbjct: 13  ALLDEHARLQSELSDPAVHADAGRAKKLTRRYAELDKVAVTARHFAQLEEDAAAAEELAD 72

Query: 78  EEDD-CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           ++ +  +  +        ++ E+       + S   D+ DA +E+ AG GG ES  +A  
Sbjct: 73  DDAEFGAEAKRLHAEAADVETELRDL---LVPSDPDDARDAIIEIKAGEGGDESALFAGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL--LIKGPNAYGWLKGEQGVHRLVRIS 194
           LLRMY RW + R + ++ L+    +  G K  TL    K   AYGW+K E GVHR+ R+ 
Sbjct: 130 LLRMYQRWIDSRGWSSQILDATHSDLGGYKDVTLALKAKDDGAYGWVKFEGGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS + + V+P VD+  E+ + ++D RID YR+SG GGQ VNTTDSAVRITH
Sbjct: 190 VTESQGRIHTSAAGVLVFPEVDEPEEVALDDNDLRIDVYRSSGPGGQSVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+   CQ E+SQ +NK  A  MLRA++   +  +   E A+I  S    +    +IR
Sbjct: 250 VPTGITASCQNEKSQLQNKEAALRMLRARILAKQAEEAAAEAADIRRSQVRTVDRSERIR 309

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D RT  +  +   VL G+LD  + +     K
Sbjct: 310 TYNF-PENRITDHRTGYKAYNLDQVLAGELDPVIGSCREADK 350


>gi|302811530|ref|XP_002987454.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
 gi|300144860|gb|EFJ11541.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
          Length = 505

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 115/315 (36%), Positives = 172/315 (54%), Gaps = 20/315 (6%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQ 93
              +  +   + +E ++LD ++  IK ++ +  + + L EL  E  +D  + +  S  LQ
Sbjct: 17  FHAHGEKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQ 76

Query: 94  RIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
               EV   Q + LL      EADS         GAGG E+  +A+ L +MY ++A    
Sbjct: 77  TATREVRDAQHDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYEKYAANNS 128

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L I   +    K A+  I G   YG LK E GVHR+ R+   +   R HTS +S+
Sbjct: 129 WRFEVLSITTTDTRCYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASV 188

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  ++ I++EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQ
Sbjct: 189 AILPEANE-IDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQ 247

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDL 326
           HKNKA+A ++L A+LYELE  +    A+  E  + +IG      +IR+Y   P   V D 
Sbjct: 248 HKNKAKALSILYARLYELERSR--AAASRSELRQDQIGSSDRSERIRTYNF-PQGRVTDR 304

Query: 327 RTNIEKTSPSDVLDG 341
           R  + + +   +++G
Sbjct: 305 RVGVTQHAIEQIMEG 319


>gi|296775701|gb|ADH42977.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_38M03]
          Length = 358

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 110/335 (32%), Positives = 171/335 (51%), Gaps = 10/335 (2%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSI 84
           L  +     +  +        +E  +L + I   K       +   L  +  ++ +D  +
Sbjct: 17  LEKELSTGDI--DPKLFAKKSKEYSNLGSIIDSAKSFVKFDNEKKDLENIVKDKTNDPEM 74

Query: 85  LQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           +     +L  +    E  +       L   E D  +A +E+ AG GG E+  +   L +M
Sbjct: 75  IDLAEKDLSELFKRREKWENDLKIFLLPKDEDDDKNAIVEIRAGTGGLEASLFCADLFKM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y +   K+K+  E + I   E  G K     + G + Y +LK E GVHR+ RI   ++  
Sbjct: 135 YEKVCSKKKWNLEIINISKSEAGGFKEVIFSVNGNDIYSYLKYESGVHRVQRIPETETQG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +++ V P V + ++IEI ESD R+D +RA G GGQ VNTTDSAVRITHIP+GVV
Sbjct: 195 RVHTSAATVAVLPEV-EEVDIEIKESDLRVDVFRAGGPGGQSVNTTDSAVRITHIPSGVV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQP 319
           V  Q E+SQHKNKA+A  +LR+++YE E +K+++  +    S+   G    +IR+Y   P
Sbjct: 254 VSQQDEKSQHKNKAKALKILRSRVYEAEKRKKDQERSSNRRSQIGSGDRSERIRTYNF-P 312

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              V D R N+      + L GD+ + M   L ++
Sbjct: 313 QGRVTDHRINLTLHKLEEFLSGDIHEEMNQELRLQ 347


>gi|332671313|ref|YP_004454321.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
 gi|332340351|gb|AEE46934.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
          Length = 362

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 166/342 (48%), Gaps = 13/342 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + +  +  DP +  +   A+ L R    L       +  +    D       A  
Sbjct: 11  LLDEHAEIEARLADPAVHADAALARRLGRRYAELGRVAQAYRAWRAASDDAEAA---AEL 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANML 137
            +           LQ +    E +  + L      D+ D  LE+ AG GG ES  +A  L
Sbjct: 68  AEVDEAFAAELPALQDVARTAEARLRDVLVPRDPDDARDVILEIKAGEGGEESALFAGDL 127

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRL 190
           LRMYTR+AE+  ++T+ LE  + +  G K   L +K           +  LK E GVHR+
Sbjct: 128 LRMYTRYAERMGWQTQVLESTESDLGGFKDVHLSVKARGAVAPEDGVWAHLKYEGGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V P  +D  E++I  +D RID YR+SG GGQ VNTTDSAV
Sbjct: 188 QRVPVTESQGRIHTSAAGVLVLPEAEDEGEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWG 309
           RITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L     ++    A+    S+   +   
Sbjct: 248 RITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASQARRSQVRTVDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   + D RT  +  +   VL GDL   +++ +
Sbjct: 308 ERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLGPVVQSAI 348


>gi|171920548|ref|ZP_02695589.3| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185178800|ref|ZP_02554523.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024350|ref|ZP_02570606.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518435|ref|ZP_02556548.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524208|ref|ZP_02557610.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867475|ref|ZP_03079479.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273256|ref|ZP_03205792.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225550782|ref|ZP_03771731.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225551438|ref|ZP_03772384.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903245|gb|EDT49534.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209423|gb|EDU06466.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018616|gb|EDU56656.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188998234|gb|EDU67331.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195660120|gb|EDX53500.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660951|gb|EDX54204.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249776|gb|EDY74556.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225379253|gb|EEH01618.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|225379936|gb|EEH02298.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 359

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 14/337 (4%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L T T       +  + K +  + +          + + ++   ++  EL   E D  
Sbjct: 23  QELETITS------DFKKIKEINIQLKKTTKIAEAFAKYKQKIDAGIVAEELLNTEKDLE 76

Query: 84  ILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           +++    +L   K  +       +   L +   D  +  +E+   AGG ES  +   L  
Sbjct: 77  LVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKNVIVEMRPAAGGDESSIFVGNLFD 136

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y  + E   +K + +E+      G    + +I G   Y  +K E GVHR+ R+   +S 
Sbjct: 137 TYRAYTESNNWKMKIIEMTPN-AVGFSFISFMISGEEVYSRMKFESGVHRVQRVPATESK 195

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P   D +++ I+ SD RIDTYRASGAGGQHVN T+SAVRITHIPTGV
Sbjct: 196 GRVHTSTITVAVLPE-QDEVDVVINPSDLRIDTYRASGAGGQHVNRTESAVRITHIPTGV 254

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIRSYVLQ 318
           V  CQ+ +SQ +N+  A  MLRAKL+E   +++    AN+ ++         +IR+Y   
Sbjct: 255 VAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEFANLRKNQVGTGDRSEKIRTYNY- 313

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   V D R ++       ++ G+LD+ + A +A ++
Sbjct: 314 PQNRVTDHRISLTLNKLDQIMMGELDEIIDALIADEQ 350


>gi|299132853|ref|ZP_07026048.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
 gi|298592990|gb|EFI53190.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
          Length = 358

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 16/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L  +        +        RE   +   +  +K  +    +   L  +
Sbjct: 7   LDILLARHAALEAELMAQ---VSAETYVRATRELAEISPVVEAVKAYRAGASEIADLEAM 63

Query: 76  ALE-EDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  +           L+R +   +  +   L     D  +  LE+ AG GG E+
Sbjct: 64  IADPATDADMRAMAESERPVLLERQESLEQQIRVALLPKDAMDERNVVLEIRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR+
Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVMSASEGTMGGYKEIVAEVQGRGAFAKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++I+I +SD RI+T RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTEASGRIHTSAATVAVLPEA-EDVDIDIKDSDLRIETMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++ + E   +   A      + ++G G 
Sbjct: 243 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRVLDGER--QRAAAERSADRRGQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDAL 343


>gi|293189723|ref|ZP_06608439.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
 gi|292821313|gb|EFF80256.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
          Length = 364

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 155/340 (45%), Gaps = 11/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +Q    +  +  DP    +    + + R    L    +    +     D     ELA E
Sbjct: 13  LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S   E     +      E            D+ D  LE+ AG GG ES  +A+ L 
Sbjct: 73  --DRSFADEIPALEEEEAAAHEALVKILAPRDPEDAMDVILEIKAGEGGEESALFASDLA 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AE   +    +     E  G K  TL I+           +  LK E GVHR+ 
Sbjct: 131 RMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + ++V P ++D  EI I  +D RID YR+SG GGQ VNTTDSAVR
Sbjct: 191 RVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGR 310
           ITHIP+G+VV  Q E+SQ +NK  A  +L ++L      K+E  A+    S    +    
Sbjct: 251 ITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKKEAEASAQRLSQVRTVDRSE 310

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D RT  +  +   VL G LD  + + 
Sbjct: 311 RIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVIASL 349


>gi|154509273|ref|ZP_02044915.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798907|gb|EDN81327.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
          Length = 364

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 155/340 (45%), Gaps = 11/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +Q    +  +  DP    +    + + R    L    +    +     D     ELA E
Sbjct: 13  LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D S   E     +      E            D+ D  LE+ AG GG ES  +A+ L 
Sbjct: 73  --DRSFADEIPALEEEEAAAHEALVKILAPRDPEDAMDVILEIKAGEGGEESALFASDLA 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMY R+AE   +    +     E  G K  TL I+           +  LK E GVHR+ 
Sbjct: 131 RMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + ++V P ++D  EI I  +D RID YR+SG GGQ VNTTDSAVR
Sbjct: 191 RVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGR 310
           ITHIP+G+VV  Q E+SQ +NK  A  +L ++L      ++E  A+    S    +    
Sbjct: 251 ITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARARKEAEASAQRLSQVRTVDRSE 310

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D RT  +  +   VL G LD  + + 
Sbjct: 311 RIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVIASL 349


>gi|39933683|ref|NP_945959.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192289040|ref|YP_001989645.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
 gi|61214634|sp|Q6NC66|RF1_RHOPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229470355|sp|B3QCF6|RF1_RHOPT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39647529|emb|CAE26050.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192282789|gb|ACE99169.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
          Length = 361

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 176/339 (51%), Gaps = 6/339 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +       ++ +     + E   L  A+   ++++D L +   LLE 
Sbjct: 9   LDVLLAHHAALEAQLMAQVGAEDYVRITRELSELNPLVEAVKSYRQVRDELGEIDELLED 68

Query: 76  -ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            A E +  ++ +   D L   + E+ +  +   L     D  +  LE+ AG GG E+  +
Sbjct: 69  PATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGTGGDEASLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+ R+
Sbjct: 129 AGDLFRMYEKFAALQGWSVEVISASEGTVGGYKEIIAEVKGRGAFAKLKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P V + ++++I + D RI+T RA GAGGQHVN T+SA+RIT
Sbjct: 189 PDTETQGRIHTSAATVAVLPEV-EDVDVDIKQDDLRIETMRAQGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +   +    +K   G    +I
Sbjct: 248 HLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDAARSAERKAKVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
           R+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 308 RTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|126728795|ref|ZP_01744610.1| peptide chain release factor 1 [Sagittula stellata E-37]
 gi|126710725|gb|EBA09776.1| peptide chain release factor 1 [Sagittula stellata E-37]
          Length = 349

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 172/341 (50%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL ++  +        +++    L RE   L   +  I E +    D      +
Sbjct: 7   LHQIKARLEYVEAQMATGG--GDIV---ALGREFAELSPVVRQIAEWERLTSDIEEAEAM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E   +L+      E   Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 62  LADPEMRALAEEELPDLRAALPAAEKAVQLALLPKDAADARPAVLEIRPGTGGDEAALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE   ++ + +E    E  G+K   + + G   +  LK E GVHR+ R+ 
Sbjct: 122 GDLARMYQRYAEAHGWRWDVIEEQMSELGGVKELVVRVVGEGVFARLKFESGVHRVQRVP 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I+ +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 182 ETESGGRIHTSAATVAVLPEA-EEVDIAIAAADIRIDTMRSSGAGGQHVNTTDSAVRITH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +LR +L++LE  K    A      K ++G G    +
Sbjct: 241 LPTGIVVTSS-EKSQHRNREIAMQVLRTRLFDLERSK--ADAARSADRKAQVGSGDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R  +       ++ GDLD+ + A ++
Sbjct: 298 IRTYNF-PQGRMTDHRIGLTLYKLDAIMGGDLDEIIDALIS 337


>gi|116072171|ref|ZP_01469439.1| peptide chain release factor 1 [Synechococcus sp. BL107]
 gi|116065794|gb|EAU71552.1| peptide chain release factor 1 [Synechococcus sp. BL107]
          Length = 365

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 166/346 (47%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A      L  +  DP +  +    + + RER  L+  +   + +Q    + +   EL
Sbjct: 10  LQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQVDAREL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D ++ +   + L  ++ +    ++      L     D     LE+ AGAGG E+
Sbjct: 70  LRESRSDAAMQELAQNELCELEAQHAALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + L   + +  G +   + +KG + +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGASVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL E EL    E  ++   S        
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAAAERESSDRRSQVGSGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +      D R      S   VL G L+D + A +A ++
Sbjct: 309 EKIRTYNYKD-NRTTDHRLG-RNFSLEPVLQGQLEDLIGACIAEEQ 352


>gi|168705097|ref|ZP_02737374.1| peptide chain release factor 1 [Gemmata obscuriglobus UQM 2246]
          Length = 358

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 14/342 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +  + R + L  +  DP +  + ++A  + +ER  L   +      K +   + D  + 
Sbjct: 5   LEPQLARYAELEQQLYDPAIAGDPVKAGAIGKERGALAKIVEPYIEYKRLCRAIADAEV- 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQ 131
             +A + D   +  E   +L+  +  +  +  E LL     D +   +E+ AG GG E+ 
Sbjct: 64  --MAADPDLKDMADEELADLRPKRDALHARIEEKLLLDPSEDFSKLIIEIRAGTGGDEAA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MYTR+A ++ +K E +    GE  G K     + G + Y  L+ E G HR+ 
Sbjct: 122 LFAGNLYEMYTRYAREKGWKIEEIASSPGEAGGFKEVAFGVTGDDVYQLLRYESGGHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD-CRIDTYRASGAGGQHVNTTDSAV 250
           R+   ++  R HTS +++ V P  +++ ++EI+E++    +  RA GAGGQHVN T+SAV
Sbjct: 182 RVPATETQGRIHTSAATVAVLPEPEEA-QVEINEANDIEWERMRAGGAGGQHVNKTESAV 240

Query: 251 RITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEI 306
           RI +    P  + V+CQ  RSQ KN  QA  +LR++L+E + ++   E A++ +      
Sbjct: 241 RIWYKKGTPDEMEVKCQDGRSQGKNYEQAMRILRSRLFERQQERIHRERASMRKEQIGSG 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
               +IR+Y   P     D R          ++ G LD  ++
Sbjct: 301 DRNARIRTYNF-PQNRCTDHRIEFTVYKLDAIMAGALDQMIQ 341


>gi|92116091|ref|YP_575820.1| peptide chain release factor 1 [Nitrobacter hamburgensis X14]
 gi|119361567|sp|Q1QQY7|RF1_NITHX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91798985|gb|ABE61360.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           hamburgensis X14]
          Length = 361

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 162/343 (47%), Gaps = 14/343 (4%)

Query: 16  WDNAVQRLSFLNTKT-EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + L  +                + RE   L+  +  +K  +    +   +  
Sbjct: 9   LDILLARHAALENELLSQIS----AERYVQMTRELSELNPVVEAVKNWRAVKTEIAGIDA 64

Query: 75  LALE-EDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  +   D  +          +    +      +   L     D  +  LE+ AG GG E
Sbjct: 65  MIADPATDAEMRAMAEAERPALGARGDELAQKIRVALLPKDAMDERNVMLEIRAGTGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A  + +K EA+   +G   G K     ++G  AY  LK E GVHR
Sbjct: 125 ASLFAGDLFRMYERFAGLQGWKVEAISASEGTMGGYKEIVAEVRGRGAYAKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + ++++I   D RI+T RA GAGGQHVN T+SA
Sbjct: 185 VQRVPDTETQGRVHTSAATVAVLPEA-EEVDVDIKTDDLRIETMRAQGAGGQHVNKTESA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-W 308
           +RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+     +     +   G  
Sbjct: 244 IRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRINAARSADRKDQVGSGDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
             +IR+Y   P   V D R N+       V+ GD L + + A 
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDAL 345


>gi|209554361|ref|YP_002284416.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|238054476|sp|B5ZAH6|RF1_UREU1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209541862|gb|ACI60091.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
          Length = 359

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 101/337 (29%), Positives = 164/337 (48%), Gaps = 14/337 (4%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L T T       +  + K +  + +          + + ++   ++  EL   E D  
Sbjct: 23  QELETITS------DFKKIKEINIQLKKTTKIAEAFAKYKQKIDAGIVAEELLNTEKDLE 76

Query: 84  ILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           +++    +L   K  +       +   L +   D  +  +E+   AGG ES  +   L  
Sbjct: 77  LVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKNVIVEMRPAAGGDESSIFVGNLFD 136

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y  + E   +K + +E+      G    + +I G   Y  +K E GVHR+ R+   +S 
Sbjct: 137 TYRAYTESNNWKMKIIEMTPN-AVGFSFISFMISGEEVYSRMKFESGVHRVQRVPATESK 195

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P   D +++ I+ SD RIDTYRASGAGGQHVN T+SAVRITHIPTGV
Sbjct: 196 GRVHTSTITVAVLPE-QDEVDVVINPSDLRIDTYRASGAGGQHVNRTESAVRITHIPTGV 254

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIRSYVLQ 318
           V  CQ+ +SQ +N+  A  MLRAKL+E   +++    AN+ ++         +IR+Y   
Sbjct: 255 VAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEFANLRKNQVGTGDRSEKIRTYNY- 313

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   V D R ++       ++ G+LD+ + A +  ++
Sbjct: 314 PQNRVTDHRISLTLNKLDQIMMGELDEIIDALITDEQ 350


>gi|320334062|ref|YP_004170773.1| peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
 gi|319755351|gb|ADV67108.1| Peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
          Length = 362

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/350 (28%), Positives = 164/350 (46%), Gaps = 15/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                     +     DP++  +  + + + R  + L   ++  +E            EL
Sbjct: 6   LAALEHEYEQVEAHLADPNIISDQGQYRRVARRHRELTPIVNLWREYCTLDTQARDAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  +      +L   +  +       +   L +   D +D  +E+ AGAGG E+ 
Sbjct: 66  LS---DPEMRDLARADLDASEARMRAIDTELEVLLLPTDPHDPHDCIVEIRAGAGGDEAA 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL MY R+AE    K   L+ ++ +  G+   T  + G  A+   + E+GVHR+ 
Sbjct: 123 LFAADLLSMYERYAEGAGLKLAVLDANESDLGGLSKVTFEVTGDGAFRAFRFERGVHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P V+D+ E+++  S+ RID +R+ GAGGQ VNTTDSAVR
Sbjct: 183 RVPATETQGRIHTSTVTVAVLPQVEDA-EVDLDLSEVRIDVFRSQGAGGQGVNTTDSAVR 241

Query: 252 ITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
             +    P  +VV CQ  RSQ KN+ +A  +LRA+L E E   RE       +++   G 
Sbjct: 242 AVYRPGTPDEIVVVCQDGRSQIKNREKALVVLRARLAERERAVREAQERADRAAQVGSGD 301

Query: 308 WGRQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R   +++      V+ G L   + A + +++
Sbjct: 302 RSEKIRTYNY-PQNRVTDHRLSGDVKNFPLETVVAGGLAPLIAALVNVER 350


>gi|270285531|ref|ZP_06194925.1| peptide chain release factor 2 [Chlamydia muridarum Nigg]
 gi|301336928|ref|ZP_07225130.1| peptide chain release factor 2 [Chlamydia muridarum MopnTet14]
          Length = 220

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 125/214 (58%), Positives = 155/214 (72%), Gaps = 1/214 (0%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           ++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K EI WG QIR+YV QP
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQIRNYVFQP 180

Query: 320 YQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           Y +VKD+RT  E  +   ++DG+ LD F+KA LA
Sbjct: 181 YTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 214


>gi|66810982|ref|XP_639198.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
 gi|60467811|gb|EAL65826.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
          Length = 430

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 103/320 (32%), Positives = 175/320 (54%), Gaps = 10/320 (3%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-L 97
             E K + +E Q     + +  ++ ++L +   L  + +EE D    Q    ++ ++K  
Sbjct: 101 QSEIKKISKELQETAEPLGYFGDLIEKLKELKELQTMLVEETDEDGKQMIKSDINKLKQE 160

Query: 98  EVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           E+E  + + L S     + D+ DA LE+ AG GG+E+Q +   +  MY  +  ++ +  E
Sbjct: 161 EIEPLEKQLLFSLLPGSKDDAGDAILEIRAGTGGSEAQLFTQDVYEMYRSYCLQKGWTFE 220

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            LE+   E  G +  T+ + G   +G+LK E GVHR+ R+   ++  R HTS  ++ + P
Sbjct: 221 PLELSVTEVGGYRDVTVSVSGKGVFGFLKYESGVHRVQRVPLTETQGRIHTSTITVAILP 280

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
              D ++I+I + D ++D YR+SG GGQ VNTTDSAVRITH+PTG+ V  Q ERSQH+N+
Sbjct: 281 EPKD-VDIQIHDRDLKVDIYRSSGNGGQSVNTTDSAVRITHLPTGITVAMQDERSQHQNR 339

Query: 274 AQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           ++A  +L+A++YE E  + + E  +   +         +IR+Y   P   + D R +I  
Sbjct: 340 SKAMKILKARIYERERIRLQNERVSERNAQIGSALRSERIRTYNY-PQDRITDHRVSI-N 397

Query: 333 TSPSDVLDGD-LDDFMKATL 351
            + +  ++ D LD F+   L
Sbjct: 398 GNLNSCMNSDGLDSFIDEIL 417


>gi|328870409|gb|EGG18783.1| peptide chain release factor 1 [Dictyostelium fasciculatum]
          Length = 530

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 111/322 (34%), Positives = 174/322 (54%), Gaps = 11/322 (3%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
             E K + +E   L   ++  K +  +  +   L E+  E  D    +  + +L+ +  +
Sbjct: 196 QSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEVKDKEEKELMNQDLKEMVEQ 255

Query: 99  VEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           V+  +       L S + D  +A +E+ AG GG+E+Q +A  +L MY  +A+   +K E 
Sbjct: 256 VKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEV 315

Query: 155 LEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           LEI   +  G    + A+  I G   +G+LK E GVHR+ RI   ++  R HTS  ++ +
Sbjct: 316 LEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAI 375

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P   + ++I+I +S+ RID YR+SG GGQ VNTTDSAVRITH+PTG VV  Q ERSQ  
Sbjct: 376 LPEPKE-VDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLM 434

Query: 272 NKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+A+A  +LRA+LYE E  +   E ++   S   +     +IR+Y   P   V D R NI
Sbjct: 435 NRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEKIRTYNF-PQDRVTDHRVNI 493

Query: 331 EKTSPSDVLDGD-LDDFMKATL 351
              +   V+ G+ L+D ++  +
Sbjct: 494 STNNIESVMAGESLNDLIEEII 515


>gi|183222627|ref|YP_001840623.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912661|ref|YP_001964216.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|238687790|sp|B0SH84|RF1_LEPBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687821|sp|B0SQV0|RF1_LEPBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167777337|gb|ABZ95638.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167781049|gb|ABZ99347.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 353

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 161/345 (46%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   +  +             K L +ER  L    +   E      D      L
Sbjct: 5   LKKIQEKYLRIEDELAKATASD---TLKNLSKERSRLTPVYTKADEYLKITKDCQDAKSL 61

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  +       ++  + +     +  +   L           +E+ AG GG ES 
Sbjct: 62  LESENDPDMHSMLKSEIEEGEKKLEELAKELEIMLLPPDPNSGKSILVEIRAGTGGEESG 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY ++A+K+  + E +++      G K     +    AY   K E G HR+ 
Sbjct: 122 LFCADLFRMYNKYADKKGLRVEIIDMSQTGIGGYKEIVFSLDDDKAYDLFKFESGTHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ + P  ++  E+EI ESD RID YR+SGAGGQHVNTTDSAVR
Sbjct: 182 RIPETESGGRIHTSAVTVAILPEAEEK-EVEIKESDLRIDVYRSSGAGGQHVNTTDSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITHIPTG+VV  Q+ERSQ KN+ +A  +LRA++ +   +  +  A+  + ++   G    
Sbjct: 241 ITHIPTGIVVASQEERSQIKNRDKAMRVLRARIADQAAETAKLSADALKKAQVGSGDRSE 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P     D R      +   +++GDLD+ + A +   +
Sbjct: 301 RIRTYNF-PQGRCTDHRIGFTSHNLPAIMEGDLDELIDALIQEDR 344


>gi|316932075|ref|YP_004107057.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
 gi|315599789|gb|ADU42324.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
          Length = 361

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 6/339 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +       ++ +     + E   L  A+   ++++D L +   LLE 
Sbjct: 9   LDVLLAHHAALEAQLMAQVGAEDYVRITRELSELNPLVEAVKSYRQVRDELGEIDELLED 68

Query: 76  -ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            A E +  ++ +   D L   + E+ +  +   L     D  +  LE+ AG GG E+  +
Sbjct: 69  PATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGTGGDEASLF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+ R+
Sbjct: 129 AGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P V + ++++I + D RI+T RA GAGGQHVN T+SA+RIT
Sbjct: 189 PDTETQGRIHTSAATVAVLPEV-EDVDVDIKQEDLRIETMRAQGAGGQHVNKTESAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQI 312
           H+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +   +     K   G    +I
Sbjct: 248 HLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVDAARSAERKEKVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
           R+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 308 RTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|167470794|ref|ZP_02335498.1| peptide chain release factor 1 [Yersinia pestis FV-1]
          Length = 303

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 109/298 (36%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D++   E+
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSA-QDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  K       +  Q   L     D  D +LE+ AG GG E+ 
Sbjct: 68  ML--DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY+R+AE R++K E +   +GE  G K     I G   +G LK E G HR+ 
Sbjct: 126 IFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           ITHIPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G
Sbjct: 246 ITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTG 301


>gi|47459025|ref|YP_015887.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
 gi|61214626|sp|Q6KIA0|RF1_MYCMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|47458353|gb|AAT27676.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
          Length = 358

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 178/347 (51%), Gaps = 13/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
             +  ++      K   P ++ N+ E   + +E   +   +    +    +  + D  IL
Sbjct: 9   LKSIKEKYDSNEKKLLLPEVFNNIKEYTKISKENNSISEIVENFNKFLINEQTIKDAKIL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
           L    +E D  ++    + + + +LE +  +       L   E D  +  +E+   AGG 
Sbjct: 69  L----DEKDEEMVSFAKNEIHKSELENQELEKKLRILILPKDENDERNVIIEIRGAAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LL+MY +WA+  K K + L+  +    G    T L++G  AY  LK E GVH
Sbjct: 125 EANIFAGDLLKMYNKWADINKMKLKLLDYANASSGGFSQVTFLVEGDKAYSKLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   ++  R HTS +++ V P VDD  E+EI+  D +IDT+R+SG GGQ VNTTDS
Sbjct: 185 RVQRIPVTETQGRVHTSTTTVTVMPEVDDVAEVEINPVDLKIDTFRSSGPGGQSVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VV  Q E+SQ  N+  A  +L++KLY+LE++KR E              
Sbjct: 245 AVRITHLPSGIVVSSQDEKSQISNRESALKILKSKLYDLEIKKRNEETGKFRKLAGSGAR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R     +     ++G +++ ++A  A ++
Sbjct: 305 SEKIRTYNY-PQDRITDHRIGFSTS-LKIAMEGKINNIIEALHAEEQ 349


>gi|50842731|ref|YP_055958.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289425142|ref|ZP_06426919.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|295130812|ref|YP_003581475.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|50840333|gb|AAT83000.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289154120|gb|EFD02808.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|291375831|gb|ADD99685.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|313764216|gb|EFS35580.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA1]
 gi|313772062|gb|EFS38028.1| peptide chain release factor 1 [Propionibacterium acnes HL074PA1]
 gi|313791908|gb|EFS40009.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA1]
 gi|313810262|gb|EFS47983.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA1]
 gi|313812711|gb|EFS50425.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA1]
 gi|313816309|gb|EFS54023.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA1]
 gi|313818790|gb|EFS56504.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA2]
 gi|313820562|gb|EFS58276.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA1]
 gi|313822633|gb|EFS60347.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA2]
 gi|313827397|gb|EFS65111.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA2]
 gi|313830592|gb|EFS68306.1| peptide chain release factor 1 [Propionibacterium acnes HL007PA1]
 gi|313833628|gb|EFS71342.1| peptide chain release factor 1 [Propionibacterium acnes HL056PA1]
 gi|313838323|gb|EFS76037.1| peptide chain release factor 1 [Propionibacterium acnes HL086PA1]
 gi|314915694|gb|EFS79525.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA4]
 gi|314917937|gb|EFS81768.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA1]
 gi|314920320|gb|EFS84151.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA3]
 gi|314924927|gb|EFS88758.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA3]
 gi|314931540|gb|EFS95371.1| peptide chain release factor 1 [Propionibacterium acnes HL067PA1]
 gi|314957925|gb|EFT02028.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA1]
 gi|314960548|gb|EFT04650.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA2]
 gi|314962564|gb|EFT06664.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA1]
 gi|314967573|gb|EFT11672.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA1]
 gi|314973593|gb|EFT17689.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA1]
 gi|314975815|gb|EFT19910.1| peptide chain release factor 1 [Propionibacterium acnes HL045PA1]
 gi|314983706|gb|EFT27798.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA1]
 gi|314987887|gb|EFT31978.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA2]
 gi|314989698|gb|EFT33789.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA3]
 gi|315084734|gb|EFT56710.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA2]
 gi|315085418|gb|EFT57394.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA3]
 gi|315095866|gb|EFT67842.1| peptide chain release factor 1 [Propionibacterium acnes HL038PA1]
 gi|315098771|gb|EFT70747.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA2]
 gi|315101459|gb|EFT73435.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA1]
 gi|315105832|gb|EFT77808.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA1]
 gi|315108751|gb|EFT80727.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA2]
 gi|327326418|gb|EGE68208.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA2]
 gi|327329874|gb|EGE71628.1| peptide chain release factor 1 [Propionibacterium acnes HL097PA1]
 gi|327445686|gb|EGE92340.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA2]
 gi|327448330|gb|EGE94984.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA1]
 gi|327450545|gb|EGE97199.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA3]
 gi|327453373|gb|EGF00028.1| peptide chain release factor 1 [Propionibacterium acnes HL092PA1]
 gi|328753199|gb|EGF66815.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA2]
 gi|328753962|gb|EGF67578.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA1]
 gi|328754695|gb|EGF68311.1| peptide chain release factor 1 [Propionibacterium acnes HL020PA1]
 gi|328760891|gb|EGF74456.1| peptide chain release factor 1 [Propionibacterium acnes HL099PA1]
          Length = 361

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|148243244|ref|YP_001228401.1| peptide chain release factor 1 [Synechococcus sp. RCC307]
 gi|166223614|sp|A5GVY9|RF1_SYNR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147851554|emb|CAK29048.1| Peptide chain release factor 1 [Synechococcus sp. RCC307]
          Length = 364

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 162/341 (47%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +  + L  +  DP +  +  +   L +ER  L+  +   + +Q    ++    +L
Sbjct: 10  LEATCRTFNALERQLADPSVAADPEQLLTLAKERSRLEPLVLDYQRLQQLHAEHQQAQQL 69

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E   D  +     + LQ++  E E      +   L S   D     LE+ AGAGG E+
Sbjct: 70  LKESKGDAELEALAQEELQQLSSEQEQLNQRLKVALLPSDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R A+   ++   +   + E  G K   L I+G   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFKELILAIRGDAVFSQLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D ++++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEA-DPVDVQIDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL   E ++     +    ++   G   
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLAKEEEEAAAAESSARRAQVGSGDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y  +      D R   +      VL+G L D ++A 
Sbjct: 309 EKIRTYNYKD-NRTTDHRLG-KNFPLETVLNGQLSDLIEAC 347


>gi|47096965|ref|ZP_00234541.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47014675|gb|EAL05632.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 314

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 150/275 (54%), Gaps = 5/275 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +    + L +E+  +   +   +E ++   ++ +   L
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++   + +E    LQ+ K ++E   +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYD 278


>gi|307128661|ref|YP_003880691.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
 gi|306483123|gb|ADM89993.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
          Length = 337

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 104/261 (39%), Positives = 178/261 (68%), Gaps = 3/261 (1%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  + L +IK  +   + + + + +    +A +++  GAGGTES DW +ML RMYT WA
Sbjct: 65  RELINKLNKIKNFINQIESQIIFTKKEYKLNAIIQITPGAGGTESCDWVSMLYRMYTMWA 124

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK  +  + L    G+  G+K     ++G + +G+LKGE GVHRLVRISP+D++ +RHTS
Sbjct: 125 EKNNYSIKELYNLQGDVGGLKYILFEVQGFSPFGFLKGENGVHRLVRISPFDNS-KRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+++YP+++D I+I+I+ SD +  T+R+ G+GGQ+VN  ++ VR+ H PT ++++  +
Sbjct: 184 FASVYIYPLINDDIKIKINNSDIKWSTFRSGGSGGQNVNKVETGVRLHHKPTNIIIENTE 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
            RSQ KNK +A  +L+++LY +E  K+ +     ++   +I WG QIR+Y++ PY++VKD
Sbjct: 244 TRSQIKNKTKALKLLKSRLYYIE--KQNKNIIRKKNKLKKIEWGSQIRNYIMHPYKLVKD 301

Query: 326 LRTNIEKTSPSDVLDGDLDDF 346
           L+T  E ++ + V+DG+L++F
Sbjct: 302 LKTGYETSNINSVMDGNLNNF 322


>gi|313801610|gb|EFS42850.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA2]
          Length = 361

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L R    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGRRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|42569997|ref|NP_182225.3| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana]
 gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R + L      P       E     +E + L +++  I +++ +  +   L  L
Sbjct: 60  LSAIEHRNAVLQKLINQPEYS--PEEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSL 117

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTES 130
             E  DD  +L      L     E +  Q   L       EAD  D  LEV AG GG E+
Sbjct: 118 VSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEA 177

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  + RMY R+++K+ +K + ++I + +  G K A+  I G + YG LK E G+HR+
Sbjct: 178 SLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLKFESGIHRV 237

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+SAV
Sbjct: 238 QRIPITEKSGRIHTSAISVAILPQA-DEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 296

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG++V  Q ERSQH N+A+A  +L A+LYE+E  + +  ++  +    +IG G 
Sbjct: 297 RIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQ--SSRSKLRSDQIGSGD 354

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +   IR+Y   P   V D R  I   +  D++ G+ LD F+ A L
Sbjct: 355 RSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMFIDALL 398


>gi|315080405|gb|EFT52381.1| peptide chain release factor 1 [Propionibacterium acnes HL078PA1]
          Length = 361

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 174/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G      YG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPVYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|66361428|pdb|1ZBT|A Chain A, Crystal Structure Of Peptide Chain Release Factor 1 (Rf-1)
           (Smu.1085) From Streptococcus Mutans At 2.34 A
           Resolution
          Length = 371

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 94/346 (27%), Positives = 156/346 (45%), Gaps = 8/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E 
Sbjct: 19  LQAVEDRYEELGELLSDPDVVSDTKRFXELSREEANSRETVAVYREYKQVVQNIADAQEX 78

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +   D  + +   + L+  K+  E  +    F  L     D  +  LE+   AGG E+
Sbjct: 79  IKDASGDPELEEXAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL  Y ++AE + +K E  E       G+K     + G + Y  LK E G HR+
Sbjct: 139 ALFAGDLLNXYQKYAENQGWKFEVXEASANGVGGLKEVVAXVSGQSVYSKLKYESGAHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS ++  +     + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 199 QRVPVTESQGRVHTSTAT-VLVXPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+       
Sbjct: 258 RIIHLPTNIKVEXQEERTQQKNRDKAXKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 317

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 318 ERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 362


>gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 278

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 109/273 (39%), Positives = 174/273 (63%), Gaps = 2/273 (0%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +L+E   +++ +   ++  +   LL G+ D+  A L+++AGAGG ++QDW  ML RMY  
Sbjct: 1   MLREALTSVEALDKALDAWELRRLLGGKYDAFGAVLQIYAGAGGLDAQDWTEMLERMYLG 60

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W EKR F   A E  +GE  G+K+ATL ++G  AYG+L  E+G HRLVR SP++ ++ R 
Sbjct: 61  WCEKRGFAVRATERLEGEGGGLKTATLEVEGRYAYGYLSSEKGTHRLVRQSPFNKDAARQ 120

Query: 204 TSFSSIWVYPVVDDSIE--IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           TSF+++ V P+ ++ +E  +++ ++D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V
Sbjct: 121 TSFAAVDVIPLFEEDMEEVVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGITV 180

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           + ++ R+Q  N+  A   ++AKL  L  + R            +  WG+QIR+YVL PY+
Sbjct: 181 KAEEHRTQQLNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQQIRNYVLHPYK 240

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +VKD+RT +E +  + VL+G LD++M   L  K
Sbjct: 241 LVKDVRTGVETSDANKVLNGALDEYMNGYLRWK 273


>gi|167842463|gb|ACA03159.1| RF1 [Dictyostelium fasciculatum]
          Length = 515

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 111/322 (34%), Positives = 174/322 (54%), Gaps = 11/322 (3%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
             E K + +E   L   ++  K +  +  +   L E+  E  D    +  + +L+ +  +
Sbjct: 181 QSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEVKDKEEKELMNQDLKEMVEQ 240

Query: 99  VEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           V+  +       L S + D  +A +E+ AG GG+E+Q +A  +L MY  +A+   +K E 
Sbjct: 241 VKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEV 300

Query: 155 LEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           LEI   +  G    + A+  I G   +G+LK E GVHR+ RI   ++  R HTS  ++ +
Sbjct: 301 LEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAI 360

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P   + ++I+I +S+ RID YR+SG GGQ VNTTDSAVRITH+PTG VV  Q ERSQ  
Sbjct: 361 LPEPKE-VDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLM 419

Query: 272 NKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           N+A+A  +LRA+LYE E  +   E ++   S   +     +IR+Y   P   V D R NI
Sbjct: 420 NRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEKIRTYNF-PQDRVTDHRVNI 478

Query: 331 EKTSPSDVLDGD-LDDFMKATL 351
              +   V+ G+ L+D ++  +
Sbjct: 479 STNNIESVMAGESLNDLIEEII 500


>gi|256370594|ref|YP_003108419.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009386|gb|ACU52746.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
          Length = 348

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 109/336 (32%), Positives = 176/336 (52%), Gaps = 7/336 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
            + L+     P + +N  +  +L +E + L   I++   ++    +   +  L     D 
Sbjct: 17  FNSLSKLISTPEIIKNYKKYILLSKEYKFLYKIINYYNNLKKNKTNIKEIENLLK--KDS 74

Query: 83  SILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
            +L+      + + LE +    + E+LL  + + N   +E+ AG GG E+  +   + RM
Sbjct: 75  ELLELAFLEKKNLFLEKKKILNKIENLLKKK-NYNKILMELRAGTGGDEACIFVEDIFRM 133

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YT + ++  +K + L +  G   G K   L I+G N Y  LK E GVHR+ RI   +S  
Sbjct: 134 YTLYFKELGWKYDILNMQQGSIKGYKEIILEIEGKNVYDKLKFESGVHRVQRIPYTESQG 193

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V P       I+I  SD + +T++ASGAGGQHVN T+SA+R+THIPTG+V
Sbjct: 194 RLHTSAITVAVIPENYYKNNIKIVLSDLKRETFKASGAGGQHVNKTESAIRLTHIPTGIV 253

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQP 319
            +CQ+ERSQHKN  +A  +LRA++Y  E +K+ E+ +    S    G    +IR+Y   P
Sbjct: 254 AECQEERSQHKNYEKAIKVLRARIYNSEFKKKNELLSKKRKSLISTGERSEKIRTYNY-P 312

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              V D R N         ++G L++ + A   ++K
Sbjct: 313 QGRVTDHRINKSIYYLDHFMNGKLNEMITALQILEK 348


>gi|91974579|ref|YP_567238.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB5]
 gi|119361592|sp|Q13F02|RF1_RHOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91681035|gb|ABE37337.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB5]
          Length = 361

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 107/317 (33%), Positives = 167/317 (52%), Gaps = 9/317 (2%)

Query: 41  EAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIK 96
           E   + RE   L+  +      +E++D L D   LLE    + +  ++ +   D L   +
Sbjct: 31  EYVRITRELSELNPLVEAVKAYREVRDELGDVDALLEDPDTDSEMRAMAEAERDALDAHR 90

Query: 97  LEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
            E+ +  +   L     D  +  LE+ AG GG E+  +A  L RMY ++A  + +  E +
Sbjct: 91  AELIQEIRVALLPKDAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVI 150

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
              +G   G K     +KG  A+  LK E GVHR+ R+   ++  R HTS +++ V P V
Sbjct: 151 SASEGSMGGFKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEV 210

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            + ++++I   D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV  Q  RSQHKN+A 
Sbjct: 211 -EEVDVDIKADDLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRAS 269

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A N+LR+++Y+ E Q+ +   +     K   G    +IR+Y   P   V D R N+    
Sbjct: 270 AMNILRSRIYDAEQQRLDAARSAERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYK 328

Query: 335 PSDVLDGD-LDDFMKAT 350
              V+ G+ L + + A 
Sbjct: 329 LPQVIAGEALGELIDAL 345


>gi|296393116|ref|YP_003658000.1| peptide subunit release factor 1 [Segniliparus rotundus DSM 44985]
 gi|296180263|gb|ADG97169.1| peptide chain release factor 1 [Segniliparus rotundus DSM 44985]
          Length = 354

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 121/345 (35%), Positives = 175/345 (50%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +     L  +  DP L  +V  AK + +    L        + +    D     EL
Sbjct: 5   LPELIAEYESLQKRWADPSLQDDVSAAKKIGKRVAELGPVYEAHTQREAARADLAAAHEL 64

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A  E D    +E  + L  RI                 D +D  LEV +GAGG ES  +A
Sbjct: 65  A--ELDPEFGREEVERLTGRIHELDAALAELLAPRDPHDGDDVVLEVKSGAGGEESALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--------GPNAYGWLKGEQG 186
             L+RMYT++AE+R+++ E L + + +  G+K AT+ IK            + WLK E G
Sbjct: 123 GDLMRMYTKFAERRRWRVEVLSMAESDLGGVKDATISIKRTGGDQSPANGVWAWLKHEGG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + +  YP  +D+ +I I E++ RID YR+SG GGQ VNTT
Sbjct: 183 VHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPDIVIDETELRIDVYRSSGKGGQGVNTT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L +L  +K    A  G   +   
Sbjct: 243 DSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQLREEKAAAEAASGRKEQIRT 302

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +    +IR+Y   P   + D R   +  +   VL+GDL+  +   
Sbjct: 303 VDRSERIRTYNF-PENRITDHRIGYKANNLDMVLEGDLEAMLSEL 346


>gi|295111639|emb|CBL28389.1| peptide chain release factor 2 [Synergistetes bacterium SGP1]
          Length = 224

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 126/219 (57%), Positives = 161/219 (73%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMY R+AE+   K   LE  + EEAGIKSAT++++G NAYG+LK E+GVHRLVRISP
Sbjct: 1   MLLRMYLRYAERDGLKATVLEATNDEEAGIKSATVMMEGDNAYGFLKAERGVHRLVRISP 60

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +DS  RRHTSF+S+ V P   D ++++I   D ++DTYRASGAGGQ+VN TDSA+RITH+
Sbjct: 61  FDSAHRRHTSFASVLVTPEFSDDVDVDIRPEDLKVDTYRASGAGGQYVNRTDSAIRITHL 120

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+VV CQ ERSQH N+  A ++LR+KLYE  LQ+R++        K E  WG QIRSY
Sbjct: 121 PTGIVVTCQNERSQHMNRQVAMHVLRSKLYERALQERQDELASVVGDKKETTWGSQIRSY 180

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VL PY +VKD RT +EK +   VLDGD+DDF+   L  +
Sbjct: 181 VLHPYTLVKDHRTGLEKGNAQAVLDGDIDDFIMEYLRFR 219


>gi|32491094|ref|NP_871348.1| hypothetical protein WGLp345 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173141|sp|Q8D2K9|RF1_WIGBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25166301|dbj|BAC24491.1| prfA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 364

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 3/338 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +     DP   +      +L +E   L+    ++K ++           +
Sbjct: 15  LKKLKNRYKEIKIILSDPFSAKKQKNFFLLSKEYSKLNILNKYLKSLESINNTIESTKTM 74

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWA 134
            L+ +   + +   +  +  K  +E K    L+  E +   + ++E+ +G GG E+  + 
Sbjct: 75  LLDPEMHDLAKNEINIYKNKKKLIEKKIILYLIPNEDEYICNCFIEIRSGTGGKEASLFV 134

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY +++E + +KT+ +   + E  G K   + I   NAY  LK E G HR+ RI 
Sbjct: 135 RDLCRMYIKYSEIKNWKTDIINYSNSEHGGYKEVIIKICNKNAYNKLKFESGGHRVQRIP 194

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  +I V P + D    +I  SD RIDT+R+SGAGGQH+NTTDSA+RITH
Sbjct: 195 ETESQGRIHTSTCTIAVMPEMLDFKLPKIKTSDLRIDTFRSSGAGGQHINTTDSAIRITH 254

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           IPT +VV+CQ ERSQHKNK++A  +L+++L   L   K+++   I +S         +IR
Sbjct: 255 IPTNIVVECQDERSQHKNKSKAMLVLKSRLQANLLKNKKQKEEIIRKSLLGSGDRSDRIR 314

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   + D R N+      +V+DG+L+  +   L
Sbjct: 315 TYNF-PQGRITDHRINLTIYKIDEVMDGNLNILINPIL 351


>gi|314955551|gb|EFS99954.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA1]
          Length = 361

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLRDIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|315604645|ref|ZP_07879708.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313657|gb|EFU61711.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 364

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 155/343 (45%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     +  +  DP    +    + + R    L    +    +     D     EL
Sbjct: 10  LEPLLAEYEQVEAQMADPRTLADPQLMRRVGRRYAELGRVKAAADRLSAAAGDLQAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A+E  D S   E     +      E            D+ D  LE+ AG GG ES  +A+
Sbjct: 70  AVE--DRSFADEIPALEEEEAAAHEALVKILAPRDPEDAMDVILEIKAGEGGEESALFAS 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            L RMY R+AE   +    L     E  G K  TL I+           +  LK E GVH
Sbjct: 128 DLARMYGRYAEAHGWSVTELSATHTELGGFKDVTLAIRAKGTPAPDEGVWAHLKYEGGVH 187

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   ++V P ++D  EI I  +D RID YR+SG GGQ VNTTDS
Sbjct: 188 RVQRVPITESQGRIHTSAVGVFVMPEIEDDDEIVIDPADLRIDVYRSSGPGGQSVNTTDS 247

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIG 307
           AVRITH+P+G+VV  Q E+SQ +NK  A  +L ++L      KRE  A+    S    + 
Sbjct: 248 AVRITHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEASAQRLSQVRTVD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D RT  +  +   VL G LD  + + 
Sbjct: 308 RSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVISSL 349


>gi|323342350|ref|ZP_08082582.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463462|gb|EFY08656.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 359

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 166/344 (48%), Gaps = 6/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +        +  +      L +E+  +   +   ++  +         E+
Sbjct: 10  LEKIQARDEEITEMMMSSEVLSDRKMMAKLGKEQSSMQQVLHAYRQFLEAEDFFTQAQEM 69

Query: 76  AL--EEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               E +   +    S    +++   +E  +   +    +DS DA +E+   AGG E   
Sbjct: 70  LAVDEPELQELAAMESAEYSEKMVKIIEELEVLLVPKDPSDSFDAIVEIRGAAGGDEGNI 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+AE   +K E +E  D E  G    + ++KG   +   K E G HR+ R
Sbjct: 130 FAGDLYRMYTRYAESLGYKYELIEAMDAEAGGYSLISFVVKGAEPFRHFKFESGAHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V   V+D  EI+I  +D  IDT R+SGAGGQHVN TDSAVRI
Sbjct: 190 VPKTETQGRIHTSTATVLVLADVEDE-EIDIDPNDLEIDTMRSSGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQ 311
            H PTG+ V+CQ  RSQH NK +A  ++RA++YE  + + +EE     +S         +
Sbjct: 249 VHKPTGIAVKCQDGRSQHDNKDKAMRLVRARVYEEHQRRIQEERHGERQSKVGTGARSEK 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       +++G LD+ + A L  ++
Sbjct: 309 IRTYNY-PQNRVSDHRIGLTLQKLDIIMEGKLDEIVNALLEQEQ 351


>gi|295698659|ref|YP_003603314.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
 gi|291157243|gb|ADD79688.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
          Length = 346

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 119/306 (38%), Positives = 177/306 (57%), Gaps = 5/306 (1%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L RE   L   IS  K+I+    +   + +L L+E+  S+  E  + L  +K +VE +  
Sbjct: 38  LQREYTKLFKIISNFKKIESIRKEIEEIKKLILDEELKSLALEELNKLINLKKKVENRLR 97

Query: 105 ESL-LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             L    + D  D +LE+ AG GG+E+  +A  L RMY ++AE   +K E + I++ E  
Sbjct: 98  NQLTPKDQNDRKDCFLEIKAGTGGSEAAIFAKDLFRMYCKYAESCSWKVEIISINEIESG 157

Query: 164 -GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G K     I G   Y  LK E G HR+ RI   +S  R HTS   + +   V D+ EI+
Sbjct: 158 SGYKEIIAKISGKEVYRKLKFESGGHRVQRIPETESRGRIHTSSCKVAILLKV-DASEIK 216

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+++D RIDT+R+SGAGGQHVNTT+SA+R+THIPTG+ V+CQ ERSQHKN+A+A ++L A
Sbjct: 217 INQNDIRIDTFRSSGAGGQHVNTTNSAIRVTHIPTGISVECQDERSQHKNRAKAMSVLLA 276

Query: 283 KLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +L  LEL+K  +  +  +      G    +IR+Y  Q   +V D RTN      ++V++G
Sbjct: 277 RLKNLELKKVAQEKSYKKKFLFGSGERSDRIRTYNFQRGTIV-DHRTNSVTYQINEVMNG 335

Query: 342 DLDDFM 347
            L+  +
Sbjct: 336 KLEILI 341


>gi|85057288|ref|YP_456204.1| peptide chain release factor 1 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789393|gb|ABC65125.1| bacterial peptide chain release factor 1 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 351

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 15/347 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKML--MRERQHLDNAISFIKEIQDRLCDN 69
           + D      Q+   L                + +   +    L+  +       +   + 
Sbjct: 1   MLDRLKKIKQKYQDLQKLL-----LNEQNITQKIDIFKNLSKLEPTVELFNRYLNLETEF 55

Query: 70  LILLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + +  +   E D  +L          L + K+ +E  +   L     D  +  LE+   A
Sbjct: 56  IQVQTILETEQDQELLLLARQEKDTILSKKKITLEKLKILLLPQDPFDKKNVVLEIKGAA 115

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  LLR Y ++AE +K+K E L ++   + G+ S  LLI G N Y +LK E 
Sbjct: 116 GGNEANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYES 175

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS + + V+P   + +E++I   D R DT+ +SG GGQ VNT
Sbjct: 176 GVHRVQRVPTTEAQGRIHTSTAVVLVFPEA-EELELKIDWHDIRTDTFNSSGPGGQSVNT 234

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+TH+P+G+ V CQ+ +SQH+NK +A+ +L+ ++Y   L  ++E           
Sbjct: 235 TKSAVRLTHVPSGISVACQEGKSQHENKDKAFTLLKTRIYNQMLNIKQEEEKTHRKKLVG 294

Query: 306 IG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   + D R  +       +++G LD  ++  +
Sbjct: 295 TGERSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLI 340


>gi|315077778|gb|EFT49829.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA2]
          Length = 361

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y     ++  D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNFSENRL-TDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|39938500|ref|NP_950266.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
 gi|81565140|sp|Q6YRK0|RF1_ONYPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39721609|dbj|BAD04099.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
          Length = 351

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 168/345 (48%), Gaps = 11/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      Q+   L     +    QN+ +   +++    L+  +       +   +   
Sbjct: 1   MLDRLKIIKQKYQDLQKLLLNE---QNINQKIDILKNLSKLEPTVELFNRYLNLETEFTQ 57

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +   + D  +L         I  E    ++  +   L     D  +  LE+   +GG
Sbjct: 58  IQTILKTQQDQELLLLAHQEKDTILSEKKTTLDQLKILLLPQDPFDKKNVVLEIKGASGG 117

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLR Y ++AE +K+K E L ++   + G+ S  LLI G N Y +LK E GV
Sbjct: 118 NEANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGV 177

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS + + V P   + +E++I   D R DT+ +SG GGQ VNTT 
Sbjct: 178 HRVQRVPATEAQGRIHTSTAVVLVVPEA-EELELKIDWHDIRTDTFNSSGPGGQSVNTTK 236

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIP+G+ V CQ+ +SQH+NK +A+ +L+ ++Y   L  ++E  N    +    G
Sbjct: 237 SAVRLTHIPSGISVACQEGKSQHENKDKAFTILKTRIYNQMLTAKQEEENKHRKNLVGTG 296

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   + D R  +       +++G LD  ++  +
Sbjct: 297 ERSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLI 340


>gi|260220347|emb|CBA27793.1| Peptide chain release factor 1 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 329

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 109/278 (39%), Positives = 155/278 (55%), Gaps = 17/278 (6%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
            +  + +++ E++      L     D+  A++E+ AG GG ES  +A  L RMYTR+ + 
Sbjct: 45  ATAEMAQLEAELQRM---LLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDA 101

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGP--------NAYGWLKGEQGVHRLVRISPYDSN 199
           +  +TE +   + E  G K   L I+G          AYG LK E G HR+ R+   ++ 
Sbjct: 102 KGLRTEIMSASESELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQ 161

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  +I V    D++  I+I+ SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+
Sbjct: 162 GRIHTSACTIAVLAEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGI 221

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYV 316
           V +CQ  RSQH NKAQA  +L A++   E  + E  A      K+ +G G +   IR+Y 
Sbjct: 222 VAECQDGRSQHSNKAQALKVLTARI--HEKDRSERAAKDAAERKSLVGSGDRSDRIRTYN 279

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             P   + D R N+        ++GDLDD ++A  A +
Sbjct: 280 Y-PQGRLTDHRINLTLYKLDRAMEGDLDDVIEALQAYE 316


>gi|327454116|gb|EGF00771.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA2]
          Length = 361

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDSSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|329945388|ref|ZP_08293151.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328529010|gb|EGF55941.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 364

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 160/320 (50%), Gaps = 11/320 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L R    L   ++  +  Q    D     ELA E++D     E            E+ 
Sbjct: 34  RRLGRRYAELGRVVAAYRAWQSASTDLADARELAAEDED--FAAEVPTLEAAEAAAGEHL 91

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   +     D+ D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+  D + 
Sbjct: 92  REVLVPRDPDDARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDL 151

Query: 163 AGIKSA--TLLIKGP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
            G K     +  +GP       +  LK E GVHR+ R+   +S  R HTS + + V P  
Sbjct: 152 GGYKDVRLAIKTRGPVEPQNGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEA 211

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD  E++I  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  
Sbjct: 212 DDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEA 271

Query: 276 AWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A  +LRA+L           A     S+   +    +IR+Y   P   + D RT  +  +
Sbjct: 272 AMRVLRARLLAERAAAVAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYN 330

Query: 335 PSDVLDGDLDDFMKATLAIK 354
              VLDGDL   + + +A+ 
Sbjct: 331 LDAVLDGDLGPVIASAIAMD 350


>gi|307104974|gb|EFN53225.1| hypothetical protein CHLNCDRAFT_25946 [Chlorella variabilis]
          Length = 360

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 175/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +    L  +  DP +  N    + L+R    + +A+      +D         EL
Sbjct: 10  LEETEKSFKELQERMADPEVSGNNTGYQKLVRAVSDIQDAVDGYTAYKDLERQLADAKEL 69

Query: 76  ALE-EDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E E D  + +   + ++ ++  +E      ++  L     D  +  LEV AG GG E+
Sbjct: 70  LKESEGDPEMAELAREEMEALQAAIEQQGERLKYLLLPKDPLDEKNIMLEVRAGTGGEEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++A+ + +K   +     E  G K   L I G      LK E GVHR+
Sbjct: 130 ALWAADLIRMYQKYADTQGWKVSLMSESSAEAGGYKECVLQITGD---RQLKYESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ + P V D + ++I   D  + T RA GAGGQ+VN  ++AV
Sbjct: 187 QRVPATETSGRVHTSTATVAIMPEV-DDVAVKIDPKDIALTTARAGGAGGQNVNKVETAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
            + H PTG+ + CQ+ER+Q +N+ +A  +LRAKL+ELEL+K+  EI+   +S        
Sbjct: 246 DLMHKPTGIRIFCQEERTQGRNRERAMALLRAKLFELELEKQRSEISARRKSQVGTGSRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +I++Y  +  +M  D R+ I     + V++G LD+ ++  + + +
Sbjct: 306 EKIKTYNYKDTRM-SDHRSKI-NYDLNKVMEGALDECIQTMVMLDQ 349


>gi|293977889|ref|YP_003543319.1| bacterial peptide chain release factor 2 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667820|gb|ADE35455.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Sulcia
           muelleri DMIN]
          Length = 345

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 124/355 (34%), Positives = 204/355 (57%), Gaps = 25/355 (7%)

Query: 2   KLSRQLNCLGGLFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAI 56
           K+S +L  +    + +     RL   +                  +++   L       +
Sbjct: 9   KISIKLKEIYYYLNIEQKYRSRLEKESH------------NFCKKIKKSNTLFFKKKQIL 56

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           ++   I+  L +  ILLE     +   +  E      +I+      +F     G+ D+ +
Sbjct: 57  NYFYSIKVLLNELKILLEFFPYGEVTEL--EIDFIYNKIEKFFSKIEFTKFFFGKEDNLN 114

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A L++ AGAGGTES DWA+ML RMY  WAEK  FK + +    G+  G++S T ++KG +
Sbjct: 115 AVLQISAGAGGTESCDWASMLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLS 174

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +G+LKGE GVHRLVRISP+D++ +RHTSF+S+++YP++DD I I+I+ SD   +T+R+ 
Sbjct: 175 PFGYLKGENGVHRLVRISPFDNS-KRHTSFASVYIYPLIDDDINIKINTSDISWNTFRSR 233

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+GGQ+VN  +S VR+ H PT ++++  + +SQ  NK +A  +L+++L+ +E    ++  
Sbjct: 234 GSGGQNVNKVESGVRLHHHPTNIIIENSETKSQFNNKIKALKLLKSRLFYIE----KKSK 289

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           N     K +I W  QIR+Y++ PY++VKDLRT  E +    VL+G++D F+K  L
Sbjct: 290 NTTCIKK-KIEWSSQIRNYIMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 343


>gi|323249834|gb|EGA33733.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 281

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 100/274 (36%), Positives = 150/274 (54%), Gaps = 7/274 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIH 279


>gi|289428601|ref|ZP_06430285.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|289158295|gb|EFD06514.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|313807753|gb|EFS46240.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA2]
 gi|313825434|gb|EFS63148.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA1]
 gi|314978719|gb|EFT22813.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA2]
 gi|315088524|gb|EFT60500.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA1]
 gi|327331707|gb|EGE73444.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA3]
 gi|327443483|gb|EGE90137.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA2]
 gi|332675656|gb|AEE72472.1| peptide chain release factor 1 [Propionibacterium acnes 266]
          Length = 361

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 174/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMYTR+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+ TG+V  CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLRTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|254780874|ref|YP_003065287.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040551|gb|ACT57347.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 357

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 18/347 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   R + +  +  + P +         L  E   +   IS I     +  +   L  + 
Sbjct: 11  DLKNRFAEIELRMSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
            + + D  I       +  I+ E+   + E     L     D     LE+ AG GG+E+ 
Sbjct: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A  RK+K E L   D ++ G K     I G   +  +K E GVHR+ 
Sbjct: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+++I   D RIDT RASG+GGQHVNTTDSAVR
Sbjct: 187 RVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG++V    E+SQH+N+ +A  +LRA+LY++E   +        + K +IG G  
Sbjct: 246 ITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVER--KRMANERSANRKLQIGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y       + D R N+       VL G +DD +   L   +
Sbjct: 303 SERIRTYNFS-QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348


>gi|297570956|ref|YP_003696730.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931303|gb|ADH92111.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 370

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 16/351 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V     +  +   P +     + + L R    L   +S  +  +    D   + E+ 
Sbjct: 8   DAMVAEYQHIEEQMASPEVLARPEKLRSLGRRYAQLGRVVSRYRTWEKAEADLADIREII 67

Query: 77  LEE-DDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
               DD  + +E    L+           ++L+     DS DA +EV AG GG ES  +A
Sbjct: 68  ELGGDDAELFEEELPRLEEAASTAAASLRDALIPRDPDDSRDAIVEVKAGEGGEESALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--------GPNAYGWLKGEQG 186
             L+RMY R+AE + +  + L     E  G K   L +K            +  LK E G
Sbjct: 128 ADLVRMYQRYAESKGWSVQTLSATHTELGGYKDIQLAVKSSSIPEDPADGVWAHLKFEAG 187

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V+  VD+  E+++++++ RID +R+SG GGQ VNTT
Sbjct: 188 VHRVQRVPATESQGRIHTSAAGVLVFAEVDEPEEVQVADNELRIDVFRSSGPGGQSVNTT 247

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTG+ V  Q E+SQ KN+  A  +L A     +LQ  E+ A   +  +++ 
Sbjct: 248 DSAVRITHLPTGITVSMQDEKSQIKNREAAMRVLLA--RLRQLQLEEQAAKEADQRRSQV 305

Query: 306 --IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +    ++R+Y   P   + D RT  +  +   VL+G+L+  + +   + 
Sbjct: 306 RTVDRSERVRTYNF-PENRIADHRTGYKAHNLDAVLNGELEPVITSLREMD 355


>gi|327327350|gb|EGE69126.1| peptide chain release factor 1 [Propionibacterium acnes HL103PA1]
          Length = 400

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 48  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 107

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 108 T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 163

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 164 AADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRV 223

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 224 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAV 282

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 283 RLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 342

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 343 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 386


>gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 289

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 113/281 (40%), Positives = 171/281 (60%), Gaps = 15/281 (5%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           D   +  E SD +  ++  +E  +   LL G  D+  A + ++AGAGGT++QDW+ ML R
Sbjct: 10  DVPELASEVSDAVNALEGALEAWEARRLLGGTYDALGATVFIYAGAGGTDAQDWSEMLER 69

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS- 198
            Y +WA++R F         G+EAG+KS TL I+G  AYG+L  E+G HRLVR SP++  
Sbjct: 70  CYLQWADRRGFAVRVEARTPGDEAGLKSVTLEIEGRYAYGYLASEKGTHRLVRTSPFNKG 129

Query: 199 -----NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
                ++ R TSF+++ V P ++D IE+          T R+ GAGGQ+VN  ++AVR+ 
Sbjct: 130 AFSFIHATRQTSFAAVDVMPTLEDKIEV---------TTMRSGGAGGQNVNKVETAVRMK 180

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H+PTG+VV+C++ERSQ  N+A+A   L+AKL  +  ++R            +  WG+QIR
Sbjct: 181 HLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVKAEWGQQIR 240

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +YV  PY+MVKD+RT +E +    V++G LD+F  A L  +
Sbjct: 241 NYVFHPYKMVKDVRTGMETSDVEGVMNGKLDEFQNAWLRWR 281


>gi|302759755|ref|XP_002963300.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
 gi|300168568|gb|EFJ35171.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
          Length = 509

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 115/299 (38%), Positives = 169/299 (56%), Gaps = 21/299 (7%)

Query: 58  FIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLL----SGEA 112
            IK ++ +  + + L EL  E  +D  + +  S  LQ    EV   Q + LL      EA
Sbjct: 1   MIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEA 60

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS         GAGG E+  +A+ L +MY ++A    ++ E L I   +  G K A+  I
Sbjct: 61  DSR--------GAGGDEASIFASDLFKMYDKYAANNSWRFEVLSITTTDTRGYKEASAAI 112

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G   YG LK E GVHR+ R+   +   R HTS +S+ + P  ++ I++EI   + +IDT
Sbjct: 113 SGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-IDVEIRNDEIKIDT 171

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQHKNKA+A ++L A+LYELE  + 
Sbjct: 172 YRAGGAGGQHVNTTCSAVRVTHTPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR- 230

Query: 293 EEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFM 347
             +A+  E  + +IG      +IR+Y   P   V D R  + + +   +++G D+D+++
Sbjct: 231 -AVASRSELRQDQIGSSDRSERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEGIDVDNWI 287


>gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0770_37D02]
          Length = 358

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 109/330 (33%), Positives = 178/330 (53%), Gaps = 10/330 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + V     L  +    ++  +  +     +E   ++  I+  +   D   +   L ++  
Sbjct: 9   SIVNTYKTLEKELASGNI--DKKDFVKKSKEYSSIEEVINEARGYIDFGKEKKELEKIID 66

Query: 78  EED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           E+D D  +++   + L ++  +    +       L   EAD+ +A LE+ AG GG E+  
Sbjct: 67  EKDGDKEMIKLAENELIQLSKKKSEYEQKLKIYLLPKDEADAKNAILEIRAGTGGLEATL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L +MY +   K+K+  E + I   E  G K   LLIKG N Y +LK E GVHR+ R
Sbjct: 127 FVADLYKMYEKVCLKKKWLLEIINISKSEAGGFKEVILLIKGNNIYSFLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + ++I+I+E D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 187 VPKTETQGRVHTSAATVAVLPEA-EEVDIKINEKDLRIDVFRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+P+GVVV  Q E+SQHKN+A+A  +LR+++YE E +K+++  +    ++   G    +
Sbjct: 246 THLPSGVVVSQQDEKSQHKNRAKAMKILRSRVYENEREKKDKERSRDRKNQIGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           IR+Y   P   V D R N+      + L+G
Sbjct: 306 IRTYNF-PQGRVTDHRINLTLHKLEEFLNG 334


>gi|326771965|ref|ZP_08231250.1| peptide chain release factor 1 [Actinomyces viscosus C505]
 gi|326638098|gb|EGE38999.1| peptide chain release factor 1 [Actinomyces viscosus C505]
          Length = 364

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 112/320 (35%), Positives = 159/320 (49%), Gaps = 11/320 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L R    L   ++  +  Q    D     ELA E++D     E            E+ 
Sbjct: 34  RRLGRRYAELGRVVAAYRAWQSASADLADARELAAEDED--FAAEVPALEAAEAAAGEHL 91

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +   +     DS D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+  D + 
Sbjct: 92  REVLVPRDPDDSRDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDL 151

Query: 163 AGIKSATLLIKG-------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
            G K   L IK           +  LK E GVHR+ R+   +S  R HTS + + V P  
Sbjct: 152 GGYKDVRLAIKARGPVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEA 211

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD  E++I  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  
Sbjct: 212 DDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEA 271

Query: 276 AWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A  +LRA+L           A     S+   +    +IR+Y   P   + D RT  +  +
Sbjct: 272 AMRVLRARLLAERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYN 330

Query: 335 PSDVLDGDLDDFMKATLAIK 354
              VLDGDL   + + +A+ 
Sbjct: 331 LDAVLDGDLGPVIASAIAMD 350


>gi|297828437|ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 410

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 15/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R + L      P       E     +E + L +++  I +++ +  +   L  L
Sbjct: 57  LSAIEHRNALLQKLINQPEYS--PEEFSRANKELRKLRDSMFLINDLRAKQKEIDGLKSL 114

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTES 130
             E  DD  +L      L     E +  Q   L       EAD  D  LEV AG GG E+
Sbjct: 115 VSESSDDKDMLDMAVSELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEA 174

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  + RMY R+++K+ +K + ++I + +  G K A+  I G + YG LK E G+HR+
Sbjct: 175 SLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYKEASAAICGASVYGKLKFESGIHRV 234

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+SAV
Sbjct: 235 QRIPITEKSGRIHTSAISVAILPQA-DEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAV 293

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG++V  Q ERSQH N+A+A  +L A+LYE+E  + +  ++  +    +IG G 
Sbjct: 294 RIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQ--SSRSKLRSDQIGSGD 351

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +   IR+Y   P   V D R  I   +  D++ G+ LD F+ A L
Sbjct: 352 RSGRIRTYNF-PQGRVTDHRVGITLHAIEDMMQGEILDSFIDALL 395


>gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1]
 gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga
           petrophila RKU-1]
          Length = 342

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 180/326 (55%), Gaps = 18/326 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++     I+ I +R+ +    +EL  EE +  +  E 
Sbjct: 11  LLARPDLT--PEQMKNYGMEYAKIEE----IENITNRIKETQEFIELLREEGENELEIEK 64

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +       +       S +  +     A +E+  GAGG E+  +A  L RMYTR+AE++
Sbjct: 65  YEKELDQLYQELLLLLSSEVGDK-----AIVEIRPGAGGEEAALFARDLFRMYTRYAERK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS ++
Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTAT 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +++  +IEI   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERS
Sbjct: 180 VAVLPEIEEK-DIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325
           Q++NK  A  +LRA+LY+L+  K ++   I +  K++IG G    +IR+Y   P   V D
Sbjct: 239 QYQNKQTALRILRARLYQLQ--KEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            R N       ++LDGDLD+ +   +
Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321


>gi|314981451|gb|EFT25545.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA3]
          Length = 379

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 87  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 143 AADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRV 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 203 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAV 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 262 RLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 322 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|314923482|gb|EFS87313.1| peptide chain release factor 1 [Propionibacterium acnes HL001PA1]
 gi|315092954|gb|EFT64930.1| peptide chain release factor 1 [Propionibacterium acnes HL060PA1]
 gi|315103525|gb|EFT75501.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA2]
          Length = 379

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 87  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 143 AADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRV 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 203 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAV 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 262 RLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 322 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|168203426|gb|ACA21561.1| protein release factor class I [Candidatus Pelagibacter ubique]
          Length = 356

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + +   L        +  +        +E   L+  I+  K+      D   L ++
Sbjct: 7   IEELINKHMQLEKDLSSDKI--DKKLFAEKSKEYSDLNEIIADAKKYLSFENDKTELKKI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +++ D  +L+     ++ ++++ E  +       L   EAD  +A +E+ AG GG E+
Sbjct: 65  LEDQNSDEELLKMAETEIKDLQIQFEKNEKKLKLFLLPRDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + K+K+  E + I   E  G+K     IKG N Y  LK E GVHR+
Sbjct: 125 SLFAGDLFKMYEKVSHKKKWLVEIISISKSEAGGLKEVIASIKGTNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLPEA-EEVDLKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG+ V  Q E+SQHKNKA+   +LRA+LYELE  + ++  +    SK   G   
Sbjct: 244 RITHIPTGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSQDRKSKIGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+      + L+G+  D+ +++ 
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTIHKLEEFLEGEAFDEMIESL 344


>gi|325186400|emb|CCA20906.1| peptide chain release factor 1 putative [Albugo laibachii Nc14]
          Length = 397

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 117/353 (33%), Positives = 179/353 (50%), Gaps = 27/353 (7%)

Query: 19  AVQRLSFLNTKTEDP-----HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            ++R   L+ +   P              K L  E   L   ++ I+++Q  L     L 
Sbjct: 43  LLERHKSLSEQLYSPQGKMSSFV-----LKNLSIELAELTPKVTTIQKLQSTLQTIDELS 97

Query: 74  ELALE---EDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAG 126
           E+      ++D  ++Q   + LQ  K +    +     + L    AD  +  LE+ AG G
Sbjct: 98  EILASPSSQNDKELIQLAKEELQEAKEDAIALEKSLTRQLLPRDPADDKNCILEIRAGTG 157

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN LL++Y + A  R +  + L I   +  G K     I+G   YG  K E G
Sbjct: 158 GEEACLFANDLLKLYQKIAIMRNWHFQILSISHTDLGGCKECVCTIQGRGVYGQTKFESG 217

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   D     HTS  S+ V P + + IE+E++  + RID YRASG+GGQHVNTT
Sbjct: 218 VHRVQRVPINDVRV--HTSAVSVVVLPEI-EEIEMELNPKELRIDVYRASGSGGQHVNTT 274

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIPTG+    Q ERSQH+NKA+A ++LRA++Y+    +R+  +   +    +I
Sbjct: 275 ESAVRITHIPTGIQAAVQDERSQHQNKAKAMSILRARVYDQMRDQRD--SKRHQLRSLQI 332

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
           G G    +IR+Y   P   V D R N+        L+G+L D  + A +  ++
Sbjct: 333 GSGDRSERIRTYNF-PQSRVSDHRVNVTLYGIERFLNGELMDPLVDALVLDEQ 384


>gi|222100202|ref|YP_002534770.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
 gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
          Length = 349

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 116/324 (35%), Positives = 174/324 (53%), Gaps = 18/324 (5%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
             P L     E K    E   L+   S +  I++      +              +E   
Sbjct: 20  SRPDLS--PEEMKNYGIEYAKLEEIESVVNRIRETQEFIEL----------LKEEEEDEQ 67

Query: 91  NLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + R + E++    +   LLS E     A +E+  G GG E+  +A  L RMYTR+AE++
Sbjct: 68  EIDRYEKELDSLFQELFLLLSPETGDK-AIVEIRPGTGGEEAALFARDLFRMYTRYAERK 126

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  E  E+H+ +  G+K A   +KG NAY  LK E GVHR+ R+   +S  R HTS ++
Sbjct: 127 GWDVEIAEMHETDLGGVKEAVFFVKGKNAYSILKYESGVHRVQRVPITESGGRIHTSTAT 186

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P + +  +IEI   D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERS
Sbjct: 187 VVVLPEI-EERDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERS 245

Query: 269 QHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           Q++NK  A  +LRA+LY+L+ ++  +E++   +S         +IR+Y   P   V D R
Sbjct: 246 QYQNKQTALRILRARLYQLQREQLEKELSQKRKSQIGTGERSEKIRTYNF-PQNRVTDHR 304

Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351
            N       ++LDGDLD+ +   +
Sbjct: 305 INYTSYRLQEILDGDLDEIIAKLI 328


>gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
 gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
          Length = 342

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 120/326 (36%), Positives = 180/326 (55%), Gaps = 18/326 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++     I+ I +R+ +    +EL  EE +  +  E 
Sbjct: 11  LLARPDLT--PEQMKNYGIEYAKIEE----IENIANRIKETQEFIELLREEGENELEIEK 64

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +       +       S +  +     A +E+  GAGG E+  +A  L RMYTR+AE++
Sbjct: 65  YEKELDQLYQELLLLLSSEVGDK-----AIVEIRPGAGGEEAALFARDLFRMYTRYAERK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ RI   +S  R HTS ++
Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRIPVTESGGRIHTSTAT 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +++  +IEI   D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERS
Sbjct: 180 VAVLPEIEEK-DIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325
           Q++N+  A  +LRA+LY+L+  K ++   I +  K++IG G    +IR+Y   P   V D
Sbjct: 239 QYQNRQTALRILRARLYQLQ--KEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            R N       ++LDGDLD+ +   +
Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321


>gi|315092115|gb|EFT64091.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA4]
          Length = 379

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 172/345 (49%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 87  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 143 AADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRV 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 203 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAV 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 262 RLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y       + D R   +      +L GDL D + A  A +
Sbjct: 322 ARVRTYNFS-QNRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|314966526|gb|EFT10625.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA2]
          Length = 379

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 87  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 142

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 143 AADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRV 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 203 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAV 261

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 262 RLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 321

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 322 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|320096082|ref|ZP_08027682.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976962|gb|EFW08705.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 366

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 154/343 (44%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +      P    +    + + R    L    +    +     D     E+
Sbjct: 11  LEPLLAEYAQVEQDMASPATLADPARLRRVGRRYAELGRVKAAADRLAAARDDLGAAREI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E  D S  QE     +      E            D+ +A LE+ AG GG ES  +A+
Sbjct: 71  AAE--DPSFAQEVPALEEEAAAAHEALMRILAPRDPQDALNAILEIKAGEGGEESALFAS 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            L RMY R+AE   +    +     E  G K  TL I+           +  LK E GVH
Sbjct: 129 DLARMYARYAEAHGWSVTEMSATRTELGGFKDVTLAIRAKGSPAPDEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   ++  P ++D  ++ I  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESAGRIHTSAVGVFAMPEIEDDEDVVIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIG 307
           AVR+TH+P+G+VV  Q E+SQ +NK  A  +L ++L      KRE  A+    S    + 
Sbjct: 249 AVRVTHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEASAQRLSQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D RT  +  +   VL G LD  + + 
Sbjct: 309 RSERIRTYNF-PENRIADHRTGFKAHNLDQVLGGALDPVIASL 350


>gi|307128516|ref|YP_003880546.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
 gi|306482978|gb|ADM89848.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
          Length = 355

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 185/343 (53%), Gaps = 4/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L +    P +  N      + +E ++++  I++    + +L +   +  L
Sbjct: 12  IESIKKRFYELYSLIIKPDIIHNNKNYIKIYKEYKNINKIINYYNNYKKKLKNLKEIENL 71

Query: 76  ALEEDDCSILQET--SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              + D   L+        Q ++L++  K+ +     + +  +A +E+ AG GG E+  +
Sbjct: 72  IKLDSDKEFLELANIDKKSQILELKLILKKIQIYFENQNNHKNALMELRAGTGGDEACIF 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              + RMYT + ++  +  E L +  G   G K   L I+G N YG LK E GVHR+ R+
Sbjct: 132 VEDIFRMYTMYFKELCWNYEILNMQHGPIKGYKEIILEIQGKNVYGTLKFESGVHRVQRV 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ ++P  D   +I +  SD + DT+RASGAGGQHVN T+SA+R+T
Sbjct: 192 PYTESQGRLHTSAITVAIFPEEDYKKKINLILSDIKRDTFRASGAGGQHVNKTESAIRLT 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQI 312
           HIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL QK+E+++   +   +      +I
Sbjct: 252 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELNQKKEKLSKERKDLISTGDRSAKI 311

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N    +    ++G +++ + A   +++
Sbjct: 312 RTYNY-PQGRVTDHRINKSIYNLDHFMNGKINEMITALKILER 353


>gi|297182760|gb|ADI18914.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0010_09O16]
          Length = 356

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 182/345 (52%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R S L       ++  +        +E   L+  ++  K+      D + L ++
Sbjct: 7   IEELISRHSSLEKDLASGNV--DKKLFAEKSKEYSDLNEIVNSAKKYASYKNDKIELEKI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTES 130
             +++ D  +++     L  +  + E  + +  L      EAD  +A +E+ AG GG E+
Sbjct: 65  LNDKNSDEELMKMAHTELSELNSQFEQNEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY +   K+K+  E + I   +  G+K     IKG N Y  LK E GVHR+
Sbjct: 125 SLFAGDLFKMYEKVCNKKKWSLELISISRSDAGGLKEVIASIKGNNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I+E+D RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLPEA-EEVDLKINETDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITH+P+G+ V  Q E+SQHKNKA+   +LRA+LYELE  + ++  +    SK   G   
Sbjct: 244 RITHLPSGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSADRKSKIGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   V D R N+      + L+G+  D +  +L++K
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHKLEEFLEGEAFDEIIESLSLK 347


>gi|149183883|ref|ZP_01862274.1| peptide chain release factor 1 [Bacillus sp. SG-1]
 gi|148848402|gb|EDL62661.1| peptide chain release factor 1 [Bacillus sp. SG-1]
          Length = 253

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 96/244 (39%), Positives = 141/244 (57%), Gaps = 7/244 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E +     G K    
Sbjct: 1   PNDDKNVIMEVRGAAGGDEAALFAGDLYRMYSRFAEAQGWKTEVMEANSTGVGGYKEIIF 60

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           +I G  AY  +K E G HR+ R+   +S  R HTS +++   P   + +EI+I E D R+
Sbjct: 61  MINGNGAYSKMKYENGAHRVQRVPETESGGRIHTSTATVACLPEA-EEVEIDIHEKDIRV 119

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT+ +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    
Sbjct: 120 DTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD--KF 177

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +RE  A    + K+ +G G    +IR+Y   P   V D R  +       +L+G +D+ +
Sbjct: 178 QREVQAEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVI 236

Query: 348 KATL 351
            A +
Sbjct: 237 DALI 240


>gi|114797902|ref|YP_759355.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
 gi|119361550|sp|Q0C4I8|RF1_HYPNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114738076|gb|ABI76201.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
          Length = 352

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 19/349 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
               + R   +  +        N  E   L +E   L   +   + +   +  L +   +
Sbjct: 3   LQQVIDRYEEVEARMGA---TSNTNEIIALSKEHAELRPVVEKARALMTVRKGLSEAEAM 59

Query: 73  LELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +       D  + +     +  ++  +    +  Q   L     D  D  LEV AG GG 
Sbjct: 60  I----ASGDREMAELAEMEIDDLRERLPGLEQEMQLLLLPKDVDDKADIVLEVRAGTGGD 115

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+A+   +  E +++  G+  G K     + G   +G +K E GVH
Sbjct: 116 EAALFAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANVSGDGVFGRMKWESGVH 175

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   ++IEIE+   D RIDT R+SGAGGQHVNTTDS
Sbjct: 176 RVQRVPATETQGRIHTSAATVAVLP-APENIEIEVRADDIRIDTMRSSGAGGQHVNTTDS 234

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITH+PTG++V    E+SQH N+ +A + L+ +LYE E  +++   +   +S+   G 
Sbjct: 235 AVRITHLPTGIMVTSS-EKSQHVNREKAMDQLKIRLYERERAEKDAARSEARASQIGSGD 293

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +++R+Y   P   + D R  +   S   ++ GD L D ++A +   +
Sbjct: 294 RSQKVRTYNY-PENRLTDHRIGLTLYSLDRIITGDKLGDVIEALITEDQ 341


>gi|197294284|ref|YP_001798825.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
 gi|226739118|sp|B1V950|RF1_PHYAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171853611|emb|CAM11482.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
          Length = 354

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 173/344 (50%), Gaps = 13/344 (3%)

Query: 19  AVQRLSFLNTKTE--DPHLWQNVIEAKMLM--RERQHLDNAISFIKEIQDRLCDNLILLE 74
            + RL  +  K +     L QN   +  +   +    L+  +   ++          + +
Sbjct: 1   MLARLKKIQQKYQNLQQDLLQNQSISNKINIFKNLSKLEPIVELFQQYLTLEEQLTNITK 60

Query: 75  LALEE--DDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGT 128
              ++  +D  IL+      + +  + +V + Q   LL      D  +  LE+    GG 
Sbjct: 61  ALNQDQIEDKEILELAQKEKETLSQQKKVLWNQLRILLLPQDPEDQKNVILEIKGAVGGN 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLR Y ++AE +K+K E L +H   + G+ S  LLI G N Y +LK E GVH
Sbjct: 121 EANLFAADLLRTYMKYAESKKWKVEILNLHPSIKGGLSSVELLISGQNIYSFLKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +   R HTS + + V P   + +EI+I  +D R DT+ +SG GGQ VNTT S
Sbjct: 181 RVQRVPATEVQGRIHTSTAIVLVLPEAKE-VEIKIDWNDIRTDTFNSSGPGGQSVNTTKS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVR++H+P+G+ V CQ+ +SQH+NK +A+ +L+A++Y   L  ++E  N    S    G 
Sbjct: 240 AVRLSHLPSGISVACQEGKSQHENKEKAFTLLKARIYNQILNAKQEAENKHRKSLVGTGD 299

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R  +       +++G LD  ++  +
Sbjct: 300 RSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDFIIEPLI 342


>gi|212697120|ref|ZP_03305248.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675895|gb|EEB35502.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 263

 Score =  242 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 104/257 (40%), Positives = 157/257 (61%), Gaps = 7/257 (2%)

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +   +     D  D  +E+ AGAGG E+  +A  L RMY  +A+K+ +KTE +++    
Sbjct: 1   MKILLIPQDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQG 60

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G+K AT +++G  AY  LK E GVHR+ R+   +S  R HTS +++ V P   D ++I
Sbjct: 61  IGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEA-DEVDI 119

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I  +D R D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A  +LR
Sbjct: 120 KIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLR 179

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A+LYE+E +KR+    I ++ K+++G G    +IR+Y   P   + D R N       D 
Sbjct: 180 ARLYEMEEEKRQ--KEISDNRKSQVGTGDRSERIRTYNY-PQGRITDHRINKTIYQLDDF 236

Query: 339 LDGDLDDFMKATLAIKK 355
           LDG++++ + + +   +
Sbjct: 237 LDGNIEEMIDSLITEDQ 253


>gi|282853790|ref|ZP_06263127.1| peptide chain release factor 1 [Propionibacterium acnes J139]
 gi|282583243|gb|EFB88623.1| peptide chain release factor 1 [Propionibacterium acnes J139]
          Length = 361

 Score =  242 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133
              E+D +   E      R +L++   +   LL  S   D  DA +E+H+G GG ES  +
Sbjct: 69  T--EEDPAFGLEAER--LRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---PNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +    L     +  G ++  + + G     AYG+LK E GVHR+
Sbjct: 125 AADLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS   + V P VD++ E++I  ++ R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGWG 309
           R+TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+      Q  +E   +       +   
Sbjct: 244 RLTHLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 304 ARVRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|145629736|ref|ZP_01785532.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
 gi|144978073|gb|EDJ87852.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
          Length = 267

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 98/264 (37%), Positives = 144/264 (54%), Gaps = 13/264 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            ++  +R   L     D  +  +  + +   +E   L+  +   +   ++   + +  IL
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGT 128
           L      DD  + +     ++  K E+E      Q   L     D  + YLE+ AG GG 
Sbjct: 70  L------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE +++  E L  ++ E+ G K   +L+ G   YG LK E G H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESGGH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDS
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKN 272
           AVRITHIPTG+VV+CQ ERSQHK 
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKK 267


>gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF4000_37C10]
          Length = 358

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 108/331 (32%), Positives = 172/331 (51%), Gaps = 10/331 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V     L  +     +  N  +     +    +   I+  +       +   L ++  
Sbjct: 9   QIVSTYETLEKELASGDI--NKKDFANKSKGYSSIREVINQARSYLSFKKEQAELEKIIE 66

Query: 78  EED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++  D  I++   + L ++  + E  +       L   EADS +A LE+ AG GG E+  
Sbjct: 67  DKKSDKDIIELAKNELIQLSKKREENEKILKVYLLPKDEADSKNAILEIRAGTGGLEATL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L +MY R    +K+  E + +   E  G K   LLIKG N Y +LK E GVHR+ R
Sbjct: 127 FVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + I++ I+E D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 187 VPETETQGRVHTSAATVAVLPEA-EEIDVNINEKDLRIDVFRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+VV  Q E+SQHKN+A+A  +LR+++Y+ E +K+++  +    ++   G    +
Sbjct: 246 THLPTGIVVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRKNQIGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           IR+Y   P   V D R N+      + L+GD
Sbjct: 306 IRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335


>gi|289812362|ref|ZP_06542991.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 288

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 96/262 (36%), Positives = 140/262 (53%), Gaps = 7/262 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 30  LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 89

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 90  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 146

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ 
Sbjct: 147 LFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 206

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 207 RVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 266

Query: 252 ITHIPTGVVVQCQQERSQHKNK 273
           ITH+PTG+VV+CQ ERSQHKNK
Sbjct: 267 ITHLPTGIVVECQDERSQHKNK 288


>gi|224130870|ref|XP_002320945.1| predicted protein [Populus trichocarpa]
 gi|222861718|gb|EEE99260.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R + L      P    +  E     +E + L  ++  I  ++ +  +   L  L
Sbjct: 5   LSAIEHRSACLENFMNQPE--ASPTEFSRANKELRKLRGSMELITYLRTKQKEIDGLRSL 62

Query: 76  ALE-EDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +D  +L   ++ L    +  K          L   +AD  D  LEV AG+GG E+
Sbjct: 63  MTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVRAGSGGEEA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  + +MY R+++   +K E + I + +  G K A+  I G + +G LK E G+HR+
Sbjct: 123 SLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLKFESGIHRV 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +   R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+SAV
Sbjct: 183 QRVPVTEKLGRVHTSAVSVAILPQA-DEVDLQLRNEDLRIDTYRSGGSGGQHANTTNSAV 241

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITH+PTG+ V  Q ERSQH NK++A  +L AKLYE+E  +     + +           
Sbjct: 242 RITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRLHMSRSRLRSEQIGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
            +IR+Y   P   V D R  I   S +DV+ G+ LD F+ A L
Sbjct: 302 ERIRTYNF-PQGRVTDHRVGITHHSINDVMQGESLDVFIDALL 343


>gi|215764957|dbj|BAG86654.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 314

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 112/303 (36%), Positives = 169/303 (55%), Gaps = 9/303 (2%)

Query: 56  ISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSG 110
           +  I+E++ +  +   L  L     ++    +  +  L +   E +  Q +     L   
Sbjct: 1   MDMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKD 60

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K +A++I +    G K A+ 
Sbjct: 61  EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASG 120

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I GP AYG LK E G+HR+ R+   + + R HTS  S+ + P   D +++++   D RI
Sbjct: 121 TISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQA-DEVDVQLRNEDLRI 179

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYR+ G+GGQ VNTTDSAVRITH+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  
Sbjct: 180 DTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERH 239

Query: 291 K-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           +   + + +            +IR+Y   P   V D R  I   S  DV++G+ LD F+ 
Sbjct: 240 RLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFID 298

Query: 349 ATL 351
           A L
Sbjct: 299 ALL 301


>gi|321310997|ref|YP_004193326.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802841|emb|CBY93487.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
          Length = 364

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 173/344 (50%), Gaps = 16/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   LN + E         E   + +E   L+       E +  L +    LE+
Sbjct: 13  LATIHEKYVQLNKRLEQET---EGKEIIQINKEIAKLEKIAQGFIEYKKELENLDECLEI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +E +   ++     L+  K  +   +   + LL  +   D  +  +E+ + AGG ES 
Sbjct: 70  IKKESNPEFVKLAQSELEAGKRRIPELENSLKRLLIPTDPMDEKNVIVEMRSAAGGDEST 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L   Y R+A+   +K   L I +        A   + G N +  +K E GVHR+ 
Sbjct: 130 IFVENLFDTYKRYADMNNWKLTILNIQENSIGMHFLA-FSLSGKNVFSKMKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   D IEI I  SD RID YRASGAGGQHVN T+S+VR
Sbjct: 189 RVPATESKGRVHTSTITVSVMPE-QDDIEINIDPSDLRIDVYRASGAGGQHVNKTESSVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQQE+SQ +N+A A  MLR+KL+E E +K  +   I E+ + +IG G  
Sbjct: 248 ITHLPTGIVVACQQEKSQIQNRAFAMKMLRSKLWEHEQEK--QSKEIAETVRKQIGRGFR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATL 351
             +IR+Y   P   + D R ++     ++++  GDL +  ++ L
Sbjct: 306 CEKIRTYNY-PQNRITDHRVSLTLNKLNEIMIGGDLTEIHESLL 348


>gi|325190234|emb|CCA24711.1| peptide chain release factor putative [Albugo laibachii Nc14]
          Length = 372

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 184/314 (58%), Gaps = 2/314 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  +L  +  + + +   +    L  ++     W N   A  + +    +++ +  +  
Sbjct: 55  QVKDKLAVIQNILETEKTTENTQRLREESSTLGFWGNAANAIAISQRLSAMESQLQRVSA 114

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            + +  +   L  L+  E D  +++E  + ++ I+  V+    E +LSG+ D    +LE+
Sbjct: 115 YRAQFLETKELYLLSEAEKDQEMMEECFETMESIRKAVQTLSMELMLSGKDDRLPCFLEI 174

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT+SQDW  ML +MY RWA+ +K+K + ++    E  G +S  L I G  AYGW+
Sbjct: 175 QAGAGGTDSQDWVAMLSKMYERWAQHKKYKVQYVDGLRTELGGFRSVCLRIDGDLAYGWI 234

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIEISESDCRIDTYRASGAG 239
           K E GVHRL+R+SPYD   RRHTSF+ + VYP+   + +    +S  D RIDT+RA+G G
Sbjct: 235 KLEAGVHRLIRLSPYDQQKRRHTSFAQVRVYPIEAAEATTRTAVSGKDLRIDTFRATGPG 294

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN+TDSAVRITH+P+G+VVQCQ ERSQH+NKAQA  +L AKL   E+ +++      
Sbjct: 295 GQHVNSTDSAVRITHLPSGIVVQCQSERSQHRNKAQAMEVLLAKLNNQEIAEQQSAKRQY 354

Query: 300 ESSKTEIGWGRQIR 313
                +  WG Q+R
Sbjct: 355 AKGLGDNAWGNQVR 368


>gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_005D21]
 gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 358

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 105/331 (31%), Positives = 174/331 (52%), Gaps = 10/331 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V     L  +     +  N  +     +    +   I+  +       + + L ++  
Sbjct: 9   QIVSTYETLEKELASGDI--NKKDFANKSKGYSSIREVINQARSYLGFEKEKVELEKIIE 66

Query: 78  EED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++  D  +++   + L ++  + E  +       L + EADS +A LE+ AG GG E+  
Sbjct: 67  DKKSDKDMIELAKNELIQLSKKKEENEKILKVYLLPNDEADSKNAILEIRAGTGGLEATL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L +MY R    +K+  E + +   E  G K   LLIKG N Y +LK E GVHR+ R
Sbjct: 127 FVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + ++++I+E D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 187 VPETETQGRVHTSAATVAVLPEA-EEVDVKINEKDLRIDVFRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+ V  Q E+SQHKN+A+A  +LR+++Y+ E +K+++  +    ++   G    +
Sbjct: 246 THLPTGIAVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRKNQIGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           IR+Y   P   V D R N+      + L+GD
Sbjct: 306 IRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335


>gi|308233416|ref|ZP_07664153.1| peptide chain release factor 1 [Atopobium vaginae DSM 15829]
          Length = 300

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 107/281 (38%), Positives = 151/281 (53%), Gaps = 7/281 (2%)

Query: 66  LCDNLILLELA--LEEDDCSILQE-TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           L D     E+    + D+  +LQE  + N +++    +  +   +     D  D  +E+ 
Sbjct: 1   LDDIEAAKEMLHDADADEREMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVEIR 60

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GG E+  +A  L +MY R+AE + +K E L     E  G K+    + G   Y  +K
Sbjct: 61  AGVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSVMK 120

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R  TS +++ V P   D I+I+I  +D RIDTY ASG GGQ 
Sbjct: 121 YESGVHRVQRVPKTESQGRIQTSTATVAVLPEA-DEIDIQIDPTDLRIDTYCASGPGGQC 179

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL+K++E       S
Sbjct: 180 VNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQGAARLS 239

Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +   G    +IR+Y  QP   V D R     T  + VL GD
Sbjct: 240 QIGHGNRSEKIRTYN-QPQDRVTDHRIGFNATY-NGVLLGD 278


>gi|28493402|ref|NP_787563.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
 gi|28572487|ref|NP_789267.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28410619|emb|CAD67005.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28476443|gb|AAO44532.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
          Length = 347

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 163/342 (47%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++  S +  +        +  E K L      L    +  +E Q    D     EL
Sbjct: 5   IDTLLREHSIIEDRLSRCD--ASPSEMKDLSLRYSKLSRVKAAYEEFQKISLDLSAAREL 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  +DD   L E     +++       Q       E D  D  +E+  G GG ES  +A 
Sbjct: 63  A--DDDPGFLVEIPVLTEKLSDAQARLQSLLTRRDENDHRDVIMEIKGGEGGAESALFAA 120

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190
            LLRMY  +A+   +K E L   +    G K   L I          +  LK E GVHR+
Sbjct: 121 DLLRMYAYFADSNGWKVEILSYSENTLGGYKDVQLAIRKTPSSTHGVWELLKYEGGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V+P VD   EIEI+  + RID +R+SG GGQ VNTTDSAV
Sbjct: 181 QRVPATESQGRIHTSTTGVLVFPEVDAPGEIEITNDEIRIDVFRSSGPGGQSVNTTDSAV 240

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ E+SQ +N+  A  +LRA+L      + E+  +    S+   +   
Sbjct: 241 RITHLPTGIVVSCQNEKSQIQNRESAMRILRARLIAKRQDEIEKTTHAARKSQIRAMDRS 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D RT  +  +   VL+GD+   +++ +
Sbjct: 301 ERIRTYNF-PENRVVDHRTGYKAYNLDQVLNGDVSQLIRSCI 341


>gi|221124304|ref|XP_002161242.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 281

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 109/274 (39%), Positives = 154/274 (56%), Gaps = 17/274 (6%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           + +++ E++      L     D+  A++E+ AG GG ES  +A  L RMYTR+ + +  +
Sbjct: 1   MAQLEAELQRM---LLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLR 57

Query: 152 TEALEIHDGEEAGIKSATLLIKGP--------NAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           TE +   + E  G K   L I+G          AYG LK E G HR+ R+   ++  R H
Sbjct: 58  TEIMSASESELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIH 117

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS  +I V    D++  I+I+ SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +C
Sbjct: 118 TSACTIAVLAEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAEC 177

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPY 320
           Q  RSQH NKAQA  +L A++   E  + E  A      K+ +G G +   IR+Y   P 
Sbjct: 178 QDGRSQHSNKAQALKVLTARI--HEKDRSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQ 234

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + D R N+        ++GDLDD ++A  A +
Sbjct: 235 GRLTDHRINLTLYKLDRAMEGDLDDVIEALQAYE 268


>gi|301094068|ref|XP_002997878.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
 gi|262109801|gb|EEY67853.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
          Length = 366

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 115/353 (32%), Positives = 180/353 (50%), Gaps = 20/353 (5%)

Query: 17  DNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D   +R   L  +    D     +  +   L  E   L+  +  ++E+Q +      L E
Sbjct: 10  DLLGRRYDELAHELSHNDGSFSSD--KITNLSIEMAELEPKVIAVRELQSQEKAVEELDE 67

Query: 75  LALEEDDC------SILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAG 124
           +  E+ D        +     +  + +   +   + E     L   EAD   + LE+ AG
Sbjct: 68  MINEQADSDEPDALELRHMAEEERRELLEAIINLEGEVVRLMLPRDEADDKSSILEIRAG 127

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GG E+  +A  +L+MY + A  + +K E + I + +  G+K     + G  AYG +K E
Sbjct: 128 SGGDEACLFAGDILKMYQKVALAKGWKFELMSISETDLGGVKECVCSLTGRGAYGRMKFE 187

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   D     HTS  S+ V P   + +E+EI   D RID YRASGAGGQHVN
Sbjct: 188 SGVHRVQRVPVNDVRV--HTSAVSVVVLPEA-EEVEVEIDPKDLRIDVYRASGAGGQHVN 244

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT+SAVRITHIPTG+V   Q ERSQH+NKA+A  +LRA++++   +KR+       +S+ 
Sbjct: 245 TTESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIRRKRDAERQTMRNSQV 304

Query: 305 EIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             G    ++R+Y   P   V D R N+       +L+G+ LD+ + A +  ++
Sbjct: 305 GSGDRSERVRTYNF-PQSRVSDHRVNVTVFGIERMLNGELLDEIVDALVVDEQ 356


>gi|295099339|emb|CBK88428.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           cylindroides T2-87]
          Length = 316

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 99/300 (33%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V+R + +N       +  +  +   L RE+  L   +    E +    +      L
Sbjct: 8   LDSLVERYNEINELMMSSSVVSDRKQMAKLGREQNELTPIVETYAEYKQAKEEFEEAKTL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD  + +  +  ++R++      ++  +   +     DS++A++E+   AGG E+ 
Sbjct: 68  QKE-DDKELRELANAEIERLEPAIKEYLDRLELLLVPKDPNDSHNAFMEIRGAAGGDEAN 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++AE + +K E  +  D E  G    T  + G NAYG LK E G HR+ 
Sbjct: 127 IFAGDLFRMYAKYAESKGWKVEVTDSEDSEAGGFSLITFKVTGQNAYGTLKFESGSHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++  YP + D  + +I  +D  I+  RASGAGGQHVN TDSAVR
Sbjct: 187 RVPKTESQGRIQTSTATVLCYPEL-DEEDFDIDMNDLEIEAMRASGAGGQHVNKTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           I H PTG+VV+CQ  RSQH+N+A A   + A++   E  +RE     G   +T+IG G +
Sbjct: 246 IVHKPTGIVVKCQDGRSQHENRATALATIAARVK--EEHQRELDEKAGAERRTKIGTGDR 303


>gi|40062805|gb|AAR37689.1| peptide chain release factor 1 [uncultured marine bacterium 440]
          Length = 359

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 110/332 (33%), Positives = 171/332 (51%), Gaps = 14/332 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            V     L  +    ++ +   +     +E   +   I+  K       + + L ++  +
Sbjct: 10  IVDTYKTLEIQLASGNISK--KDFVKKSKEYSSIGEVINQAKGYLSFEKEKIELEKIIED 67

Query: 79  -EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            E D  ++Q     L  +  + +  +       L    AD+ +A LE+ AG GG E+  +
Sbjct: 68  KESDEEMVQLAKKELNELLEKNKTHEKILRIYLLPKDGADAKNAILEIRAGTGGDEAGLF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L +MY +     K+  E + I      G K   LLIKG N Y +LK E+GVHR+ R+
Sbjct: 128 VADLYKMYEKVCLNNKWSFEIISISKSGAGGFKEVILLIKGNNIYSFLKYERGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   + ++I+I E D RID YR++G+GGQ VNTTDSAVRIT
Sbjct: 188 PKTETQGRVHTSAATVAVLPEA-EEVDIKIQEKDLRIDVYRSTGSGGQSVNTTDSAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+VV  Q E+SQHKN+A+   +LR+++YE E +K++      +  K +IG G    
Sbjct: 247 HIPTGIVVTNQDEKSQHKNRAKGMKILRSRVYEAEREKKD--KERSKDRKNQIGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +IR+Y   P   V D R N+      + L GD
Sbjct: 305 RIRTYNF-PQGRVTDHRINVTLHKLKEFLSGD 335


>gi|66805655|ref|XP_636549.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
 gi|60464924|gb|EAL63039.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
          Length = 424

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 124/311 (39%), Positives = 185/311 (59%), Gaps = 5/311 (1%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++       +I  +  +     D L ++E++    D   L+ET   + ++       + +
Sbjct: 114 IKNYNQTKQSIEELNLLSKEFNDYLEVVEMSKNIGDNDWLKETRSLINQLFSNCSELEVK 173

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L++G+ DS    LE+ AGAGG +S DW  +L  MY +W  ++ +  E ++  DGE  G 
Sbjct: 174 ALMNGKDDSKGCLLEIQAGAGGNDSMDWTKILFEMYCKWGARKGYNVEIIDTADGEF-GY 232

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           + A+L I G NAYGWL+ E G+HRL+RISP+ S+ +RHTSF+S+ VYP+ DDSI+I I  
Sbjct: 233 RHASLKIDGHNAYGWLRTEMGIHRLIRISPFSSSGKRHTSFASVVVYPISDDSIKINIDP 292

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D   +T R+SGAGGQHVN T+SAVRI HIPTG+ V    ERSQH+NK+    +L++KLY
Sbjct: 293 KDLHFETLRSSGAGGQHVNKTESAVRIVHIPTGISVLSSSERSQHQNKSNGLLLLKSKLY 352

Query: 286 ELELQKREEIANIGESSKTEIGWGRQ--IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-- 341
             EL+K+ E          +  W     +R+Y + P + VKD RT IE    S +LDG  
Sbjct: 353 SHELKKKIEAEKSFRDELGKNSWASDSVVRNYSMHPQERVKDQRTGIEVLQISKILDGEE 412

Query: 342 DLDDFMKATLA 352
           +LD+ +K  L+
Sbjct: 413 ELDNMIKKALS 423


>gi|218507716|ref|ZP_03505594.1| peptide chain release factor 1 [Rhizobium etli Brasil 5]
          Length = 282

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 103/270 (38%), Positives = 157/270 (58%), Gaps = 11/270 (4%)

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E  + ++ ++ E+   Q   L    AD   A LE+ AG GG+E+  +A  L RMY R+A
Sbjct: 7   PEVKERIEALEQEM---QILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFA 63

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
            ++ +K E L   +GE  G K     I G   +  LK E GVHR+ R+   ++  R HTS
Sbjct: 64  AEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTS 123

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV    
Sbjct: 124 AATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSS- 181

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G    +IR+Y   P   
Sbjct: 182 EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDRSERIRTYNF-PQGR 238

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           V D R N+       +++G++++ + A +A
Sbjct: 239 VTDHRINLTLYKLDRMMEGEIEEVVDALMA 268


>gi|116326889|ref|YP_796609.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329879|ref|YP_799597.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122282347|sp|Q04W81|RF1_LEPBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122285261|sp|Q056R9|RF1_LEPBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116119633|gb|ABJ77676.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123568|gb|ABJ74839.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 354

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 169/340 (49%), Gaps = 10/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   ++ +       ++    K L +ER  L      ++E      D     EL
Sbjct: 5   LEKIQEKYLRISEELNS---AKDPSSLKSLYKERSRLTPLYLKVEEYLKIYKDKKDAEEL 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQ 131
              E D  +     + ++R   ++E  + E  +           +  +E+ AG GG E+ 
Sbjct: 62  IPSEKDEEMHSMLKEEIRRASKKLEELEKELEILLLTPDPNSGKNILVEIRAGTGGEEAG 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY+++A+K+K K+E ++       G+K     ++   AY   K E G HR+ 
Sbjct: 122 LFVADLFRMYSKFADKQKIKSEIIDSAPTGIGGLKEIIFALEDERAYDLFKFEGGTHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P  D+      +E+D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 182 RIPSTESGGRIHTSAVTVAVLPEADEEEIEI-NENDLRIDVYRSSGAGGQHVNTTDSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGR 310
           ITHIPTGVVV CQ E+SQHKNKA+A  +L A++ E +   K++    I +          
Sbjct: 241 ITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQTEDKKQASDAIKKQMIGSGDRSE 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           ++R+Y   P     D R      + S +++GDL++ + A 
Sbjct: 301 RVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLEELIGAL 339


>gi|261749210|ref|YP_003256895.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497302|gb|ACX83752.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 364

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 105/353 (29%), Positives = 184/353 (52%), Gaps = 24/353 (6%)

Query: 18  NAVQRLSFLNTK-------TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           + +++   L  +          PH+  N  + K L+++ + L+  ++  ++ + +L    
Sbjct: 5   SLIKKFEILEKEFHGIGNSIIQPHIVSNQKKYKTLLKKYRKLEKVVNIYEKYKKKLTALQ 64

Query: 71  ILLELALEEDDCSILQETS-------DNLQRIKLEVEYKQFESLLSG----EADSNDAYL 119
               +   + D  + +          ++L  I+ + +   F +  +G    E D  +A +
Sbjct: 65  EANSILKNDSDPEMKEIAYLEKNKILEDLSNIEKKSDDLLFSTSPTGRENLENDHRNAIV 124

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPN 176
           E+ +G GG E+  +   +LRMY  + ++  +K + +    G   G K   L +   +G  
Sbjct: 125 ELRSGTGGDEACLFVEDILRMYIMYFKQVGWKYKIIHAQKGGIQGYKEIILDVSGKEGEG 184

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG LK E GVHR+ RI   +S  R HTS  ++ V P + D IE++I  SD + DT+R+S
Sbjct: 185 VYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLPEIKD-IEMKIHLSDIKKDTFRSS 243

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+GGQHVN T+SAVR+THIPT + V+CQ+ERSQHKN  +A N+LR+++Y+ E +KR +  
Sbjct: 244 GSGGQHVNKTESAVRLTHIPTKITVECQEERSQHKNFEKAMNVLRSRIYQNEKEKRFKER 303

Query: 297 NIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +I   S    G    +IR+Y   P   V D R +    +    ++G++ + + 
Sbjct: 304 SIKRKSLVSTGDRSVKIRTYNY-PKGRVTDHRIHKSIYNLVGFMNGNIQEMIN 355


>gi|126311212|ref|XP_001381267.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Monodelphis domestica]
          Length = 567

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 107/300 (35%), Positives = 163/300 (54%), Gaps = 14/300 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSN 115
           ++++++  +    +E  LE+++  + +   + +   + E+   + + +L    S E D N
Sbjct: 72  RKLREKEQELQE-IERLLEDENEDLRKLAENEIISCQKELTKLKQKIILLLIPSEETDEN 130

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D  LE+ AG GG E+  +   +  MY R+A  +K+  E LE    E  G++ A+  I GP
Sbjct: 131 DLILELTAGVGGQEAMLFTAEMFDMYQRYATYKKWHFEILEYFPSEIGGLRHASASIGGP 190

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  + RI+T RA
Sbjct: 191 EAYRHMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAILPQPTE-INLVINPKELRIETKRA 249

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRI H+PTGV  +CQQERSQ KNK  A   LRAKLY + L   EE 
Sbjct: 250 SGAGGQHVNTTDSAVRIVHLPTGVATECQQERSQIKNKEMAMKKLRAKLYSMLL--EEET 307

Query: 296 ANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
                + K +I   G   +IR+Y   P   V D R +         + G+  LD+ +++ 
Sbjct: 308 NKRYSARKIQIGTKGRSEKIRTYHF-PQNRVTDHRISKSLYDIQSFMLGEYLLDELIQSL 366


>gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis
           thaliana]
          Length = 419

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 103/348 (29%), Positives = 178/348 (51%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+ K  DP +  N  E + L +    LD  ++  +  +D     L    LA
Sbjct: 62  ESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLA 121

Query: 77  LEE-DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
            E  DD  + +     +  +  E+E  + +     L S   D+ +  LEV AG GG E+ 
Sbjct: 122 KEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAA 181

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            W   L+       ++     + LE+ +G    G K+  + IKG   Y  LK E GVHR+
Sbjct: 182 IWTGDLVGADVSEVQR----AQLLEVFNGFMLRGYKTCVMEIKGNRVYSKLKYESGVHRV 237

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + + R+ GAGGQ+VN  ++A+
Sbjct: 238 QRVPQTETQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTSARSGGAGGQNVNKVETAI 296

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++  RE+   I    K+++G G 
Sbjct: 297 DLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKV--REQQEKIRNERKSQVGTGA 354

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +   + +  LDG L+D ++A  A+++
Sbjct: 355 RSEKIRTYNYKDS-RVTDHRLKM-NFALTTFLDGALEDAVQACAALEQ 400


>gi|302759769|ref|XP_002963307.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
 gi|300168575|gb|EFJ35178.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
          Length = 622

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 111/332 (33%), Positives = 172/332 (51%), Gaps = 24/332 (7%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   R + L+    +P +     +   + +E ++LD ++  IK ++ +  + + L EL  
Sbjct: 53  SIEDRHACLSKALLEPGIAS--EKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVK 110

Query: 78  EE-DDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQD 132
           E  +D  + +  S  LQ    EV   Q + LL      EADS    LE        E + 
Sbjct: 111 ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSRGYILE--------ELEV 162

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
                LR+ +    +  F      + D  E   + A+ +I G   YG LK E GVHR+ R
Sbjct: 163 TKRQFLRLISSRC-RHVFLVHVECLLDFYEC-SQEASAVISGDGVYGALKFESGVHRVQR 220

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS +S+ + P  ++ +++EI   + +IDTYRA GAGGQHVNTT SAVR+
Sbjct: 221 VPVTEKAGRIHTSTASVAILPEANE-VDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRV 279

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH PTG+VV  Q ERSQHKNKA+A ++L A+LYELE  +   +A+  E  + +IG     
Sbjct: 280 THAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AVASRSELRQDQIGSSDRS 337

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   V D R  + + +   +++G
Sbjct: 338 ERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEG 368


>gi|226329845|ref|ZP_03805363.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
 gi|225200640|gb|EEG82994.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
          Length = 274

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 7/261 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +  +  +    + L +E   L +  +   + + ++ D++   E+
Sbjct: 9   LEALQERYEEIQALLSEADVIASQERFRALSKEYSQLTDVTACFSQWR-KVQDDIEAAEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +   + L+  +   +  + +           D  + +LE+ AG GG E+ 
Sbjct: 68  ML--DDPEMKEMAQEELKEAQALNDDLEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWRIEVMNANEGEHGGYKEVIAKVVGDGAYGVLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V   V ++   +IS SD RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPETESQGRIHTSACTVAVLAEVPEAELPDISPSDLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKN 272
           ITHIPTG+VV+CQ ERSQHK 
Sbjct: 246 ITHIPTGIVVECQDERSQHKK 266


>gi|213580224|ref|ZP_03362050.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 209

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 128/209 (61%), Positives = 154/209 (73%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MTQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           HVN T+SAVRITHIPTG+V QCQ +RSQH
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQH 209


>gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977]
 gi|238688924|sp|B1MLV1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium
           abscessus]
          Length = 356

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 114/297 (38%), Positives = 162/297 (54%), Gaps = 11/297 (3%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSG 110
           L   ++  +++     D     EL+   DD S   E +  L+    E+E +  + L    
Sbjct: 43  LSPIVATHRKLATARDDLATARELSA--DDPSFADEVT-ELESSIAELETQLSDMLAPRD 99

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             D +D  LEV +G GG ES  +A  L RMY R+AE+  +K   L+  + +  G K ATL
Sbjct: 100 PHDGDDILLEVKSGEGGEESALFAADLARMYIRYAERHGWKVTVLDETESDLGGYKDATL 159

Query: 171 LI-----KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
            I          +  LK E GVHR+ R+   +S  R HTS + + VYP  ++  EI+I E
Sbjct: 160 AIASKGDSADGVWSRLKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDE 219

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L 
Sbjct: 220 SDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQ 279

Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            L  ++ +  A+ G +S+   +    +IR+Y   P   + D R   +  +   VLDG
Sbjct: 280 ALAEEQAQADASAGRASQIRTVDRSERIRTYNF-PENRITDHRVGFKAHNLDQVLDG 335


>gi|40062641|gb|AAR37562.1| peptide chain release factor 1 [uncultured marine bacterium 313]
          Length = 358

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 172/333 (51%), Gaps = 10/333 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V     L  +     + +   +     +E   +   I   K   D   + L L ++
Sbjct: 7   IQQIVNTYKTLEKELASSDIGK--KDFVKKSKEYSGIGEIIDEAKGYLDFEKEKLELDKI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             ++  D  ++Q     L  +  + +  +       L   EADS +A +E+ AG GG E+
Sbjct: 65  IEDKKSDKEMIQLVKSELNELLKKKQSYEKILKVYLLPKDEADSKNAIVEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L +MY +    +K+  E + +   E  G K   LLIKG N Y +LK E GVHR+
Sbjct: 125 TLFVADLYKMYEKVCLNKKWSFEIINLSKSEAGGFKEVILLIKGANIYSFLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I + D RID +R++GAGGQ VNTTDSAV
Sbjct: 185 QRVPETETQGRVHTSAATVAVLPEA-EEVDVKIEDKDLRIDVFRSTGAGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG+VV  Q E+SQHKN+A+   +LR+++YE E +K+E+  +    ++   G   
Sbjct: 244 RITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRIYESEREKKEKERSRDRKNQIGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            +IR+Y   P   V D R N+      + L+GD
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTIHKLQEFLNGD 335


>gi|224035189|gb|ACN36670.1| unknown [Zea mays]
          Length = 301

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 113/281 (40%), Positives = 164/281 (58%), Gaps = 5/281 (1%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWAN 135
            E+D   + +E        +  ++++ F SLL   EAD  D  LEV AG GG E+  +A 
Sbjct: 13  EEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAM 72

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            + RMY ++A+K  +K + ++I +    G K A+  I GP A+G LK E G+HR+ R+  
Sbjct: 73  DIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPA 132

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            + + R HTS  S+ V P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRITHI
Sbjct: 133 TEKSGRMHTSAVSVAVLPQA-DEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHI 191

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRS 314
           PTG VV  Q ERSQH NKA+A  +LRA+LYELE ++   + + +            +IR+
Sbjct: 192 PTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSEQIGSGDRSERIRT 251

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           Y   P   V D R  +   S +DV++G+ LD F+ A L  +
Sbjct: 252 YNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 291


>gi|294659861|ref|XP_002770657.1| DEHA2G17204p [Debaryomyces hansenii CBS767]
 gi|199434289|emb|CAR65990.1| DEHA2G17204p [Debaryomyces hansenii]
          Length = 411

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 165/345 (47%), Gaps = 20/345 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++       L TK  +     +    +    +  ++   +    + Q  + +   LLE+ 
Sbjct: 54  ESMKDEFKILETKISEGSF--D----QETNVKFSNISVILDNYHKYQHEIENLQSLLEIL 107

Query: 77  LEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            EE+D  ++ E S+ L+ +  +V    +  Q   L         A LE+  G GG+E+  
Sbjct: 108 HEEEDAEMVHEASNELKEVIPKVFNFTKVLQSRLLPPVTHSDRPAMLELRPGVGGSEAAL 167

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LL MY  +A   K+K   +    G    +  A + I  P AY  L+ E GVHR+ R
Sbjct: 168 FAGDLLNMYINFANHMKWKWTMISESHGNNGSVNEAIISIDNPGAYSILRHESGVHRVQR 227

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNT 245
           I   ++  R HTS +++ V P + +         E +    + RIDT RA G GGQHVNT
Sbjct: 228 IPSTETKGRIHTSTAAVVVLPKMSEGTESSLKDDERQFQPGEVRIDTMRAGGKGGQHVNT 287

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKT 304
           TDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L  LE  K   E   +     T
Sbjct: 288 TDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVT 347

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
                 +IR+Y   P   V D R           ++G  L++ ++
Sbjct: 348 TTDRSDKIRTYNY-PQNRVTDHRCGFSLYDIDGCMEGYRLNEIVE 391


>gi|256825643|ref|YP_003149603.1| peptide chain release factor 1 [Kytococcus sedentarius DSM 20547]
 gi|256689036|gb|ACV06838.1| bacterial peptide chain release factor 1 (bRF-1) [Kytococcus
           sedentarius DSM 20547]
          Length = 357

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 173/350 (49%), Gaps = 21/350 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A+   + L  +   P +  +    +   R    L+         +    D     EL
Sbjct: 5   LGEALAEHARLEAEMARPEVVGDPARFRAAARGYAALEPVARAAARREAAEQDLAAAREL 64

Query: 76  ALEEDD-----CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           A EE D      ++++E     + +   +  +  +          D  LEV AG GG ES
Sbjct: 65  AAEEPDFAAELPALVEELEAAQEALTRALVPRDPDD-------DRDVILEVKAGEGGQES 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKG 183
             +A+ L+RMY R AE+R +    LE    +  G+K A + I+   A       +  LK 
Sbjct: 118 ALFAHELVRMYLRHAERRGWAATVLESTASDLGGVKDARVAIRARGAGEPGDAPWARLKF 177

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +S  R HTS   + V P VDD  E+EI+ +D ++D YR+SG GGQ V
Sbjct: 178 EGGVHRVQRVPVTESQGRIHTSAVGVLVLPEVDDPGEVEIAPADLKVDVYRSSGPGGQSV 237

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESS 302
           NTTDSAVR+TH+PTGVVV CQ E+SQ +NK  A  +L ++L  + L++ + E++    + 
Sbjct: 238 NTTDSAVRLTHLPTGVVVTCQNEKSQLQNKEAALRVLASRLRRMALEEAQAEVSQARRAQ 297

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +    ++R+Y   P   V D RT  +  +   VLDGDLD  + + +A
Sbjct: 298 VRTVDRSERVRTYNF-PESRVSDHRTGYKAHNLPAVLDGDLDAVIDSLVA 346


>gi|156389000|ref|XP_001634780.1| predicted protein [Nematostella vectensis]
 gi|156221867|gb|EDO42717.1| predicted protein [Nematostella vectensis]
          Length = 273

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 106/250 (42%), Positives = 153/250 (61%), Gaps = 9/250 (3%)

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            +   EAD NDA LEV AG GG E+  +A+ +  MY R+A  +K+K + L+I   +  G 
Sbjct: 5   LIPKDEADENDAILEVRAGTGGQEASLFASEMFIMYQRFAAFKKWKFDILDIARSDTGGY 64

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K A+  I G   +G +K E GVHR+ R+   ++  R HTS  ++ V P   + +++ IS 
Sbjct: 65  KEASASISGYGVFGKMKFEVGVHRVQRVPVTEAQGRVHTSTMTVAVLPQPQE-VDVIISP 123

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D +IDT+RASGAGGQHVNTTDSAVRITHIP+G+VV  Q+ERSQ KNKA+A  +LRA+LY
Sbjct: 124 NDLKIDTFRASGAGGQHVNTTDSAVRITHIPSGMVVSSQEERSQFKNKAKAMQVLRARLY 183

Query: 286 ELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L+   +E  +    + +T+IG      +IR+Y   P   V D R  +   +    L+G 
Sbjct: 184 DLQR--QEADSARVHARRTQIGTAERSEKIRTYNF-PQGRVTDHRIGMTSHTVDKFLEGG 240

Query: 343 --LDDFMKAT 350
             L+D + A 
Sbjct: 241 VLLEDMIDAL 250


>gi|30692917|ref|NP_198466.2| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 391

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 106/265 (40%), Positives = 162/265 (61%), Gaps = 3/265 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +    +     Q ++ L +K  D   W +  +A+  +     L + +  + E +
Sbjct: 92  SARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFK 151

Query: 64  DRLCDNLILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + D   +++L  E D  D S+L+E    ++ +   ++  +   LLSG  D   A + +
Sbjct: 152 TMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYI 211

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  AYG++
Sbjct: 212 TAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYI 271

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P + ++++ IEI E D  I   RA G GG
Sbjct: 272 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGG 331

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQ 265
           Q+VN  ++AVRITHIPTGV V+C  
Sbjct: 332 QNVNKVETAVRITHIPTGVAVRCTD 356


>gi|254293181|ref|YP_003059204.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
 gi|254041712|gb|ACT58507.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
          Length = 359

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 173/347 (49%), Gaps = 17/347 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             + R      +     +  +  E   L ++   L       +E+ D          +  
Sbjct: 11  QVIDRFEQTEARMS---VATDPTEIVQLSKDHAELKLVADKARELMDAREALAEADAILS 67

Query: 78  EED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++D D  + +   +  + +K  +    +  Q   L   E D  +A LEV AG GG E+  
Sbjct: 68  DKDSDADMKELAQEEREELKSSLPELEQSLQLLLLPKDEDDEANAMLEVRAGTGGDEAAL 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+A+ + +K +     +G+  G K     + G   +G +K E GVHR+ R
Sbjct: 128 FAGDLFRMYQRYAQIQGWKLDIESQSEGDAGGYKEIIASVTGKGVFGKMKFESGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +S+ V P   + + IEI   + RIDT R+SGAGGQHVNTTDSAVRI
Sbjct: 188 VPKTESAGRIHTSAASVAVLP-APEQVNIEIKPEEIRIDTMRSSGAGGQHVNTTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H+PT ++V    E+SQH N+A+A  ML+ +LYE E    E+ A + ++ KT++G G   
Sbjct: 247 IHLPTNIMVTSS-EKSQHANRARAMEMLKIRLYEKER--AEKDAAMADARKTQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +L GD + + + A +A  +
Sbjct: 304 EKIRTYNF-PENRVSDHRIKLTLYKLEQILAGDSISEVIDALIAEDQ 349


>gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 395

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 117/370 (31%), Positives = 180/370 (48%), Gaps = 40/370 (10%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---------- 65
                 R + L      P       E     +E + L +++  I +++ +          
Sbjct: 17  LSAIEHRNAVLQKLINQPEYS--PEEFSRANKELRKLRDSMLLINDLRAKQKVVNLLYRI 74

Query: 66  ---------------LCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESL-- 107
                            +   L  L  E  DD  +L      L     E +  Q   L  
Sbjct: 75  IYLFQRSSLIRFTFCWQEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKS 134

Query: 108 --LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
                EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K + ++I + +  G 
Sbjct: 135 LLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGY 194

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K A+  I G + YG LK E G+HR+ RI   + + R HTS  S+ + P   D +++++  
Sbjct: 195 KEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQA-DEVDVQLRN 253

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH N+A+A  +L A+LY
Sbjct: 254 EDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLY 313

Query: 286 ELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           E+E  + +  ++  +    +IG G +   IR+Y   P   V D R  I   +  D++ G+
Sbjct: 314 EIERLRIQ--SSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGE 370

Query: 343 -LDDFMKATL 351
            LD F+ A L
Sbjct: 371 NLDMFIDALL 380


>gi|257069075|ref|YP_003155330.1| peptide chain release factor 1 [Brachybacterium faecium DSM 4810]
 gi|256559893|gb|ACU85740.1| bacterial peptide chain release factor 1 (bRF-1) [Brachybacterium
           faecium DSM 4810]
          Length = 378

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 180/351 (51%), Gaps = 15/351 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-AL 77
             +  + L     DP L ++   A+ + R    L+  +     ++    D   + EL AL
Sbjct: 13  LRREHAALQEAMADPALHEDAARARRVGRRYAELEGVLDAAARLEATAADLETVHELEAL 72

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            E D  + +E +   +R++ E E+ +         D+ D  LE+ AGAGG ES  +A  +
Sbjct: 73  GEGDEELAREAAQLRERLEQEREHLEDLLAPRDPDDARDVILEIKAGAGGEESALFAAEM 132

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-------LIKGPNAYGWLKGEQGVHRL 190
           LRMY  +AE + ++ E L   + E  G K  T+          G   Y  LK E GVHR+
Sbjct: 133 LRMYRAYAESQGWRVEVLTSAESELGGFKDVTVAIAARGAGGSGSGVYAHLKHEAGVHRV 192

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-----ESDCRIDTYRASGAGGQHVNT 245
            R+   +S  R HTS   + V P  D++ E E+       ++ RID +R+SG GGQ VNT
Sbjct: 193 QRVPVTESQGRIHTSAVGVLVLPEADEADESELLAEAMAPANLRIDVFRSSGPGGQSVNT 252

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVRITH+PTGVVV CQ ++SQ +N+ QA  +LR +L +    ++E  ++    S+  
Sbjct: 253 TDSAVRITHLPTGVVVSCQDQKSQLQNREQALRILRTRLLDARRAEQEAQSSAARRSQVR 312

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +    +IR+Y   P   V D RT  +  + + VL GDL+D + ++   ++
Sbjct: 313 TVDRSERIRTYNF-PESRVADHRTGYKAGNLAQVLSGDLEDLIASSREAER 362


>gi|90422036|ref|YP_530406.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB18]
 gi|119361591|sp|Q21BZ9|RF1_RHOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90104050|gb|ABD86087.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB18]
          Length = 361

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 168/342 (49%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  + +   +  +      LMRE   L+  I  +K  +    +   +  L
Sbjct: 9   LDVLLAHHASLENQLQS-QVGADT--YVKLMRELAELNPLIEAVKAYRQVGAERGEIDAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  ++         E +     +   L     D  +  LE+ AG GG E+
Sbjct: 66  LADAATDAEMRAMAEAEHAALEAQEAELAQQIRVALLPKDAMDDRNVMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAVLQGWSVEVVSASEGTMGGYKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P V + ++++I   D RI+T RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLPEV-EEVDVDIKPDDLRIETMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           RITHIPTG+ V  Q  RSQHKN+A A N+LR+++Y+ E Q+ + + +     K   G   
Sbjct: 245 RITHIPTGLQVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSVRSAERKEKVGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 305 ERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|296483896|gb|DAA26011.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
          Length = 380

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 163/306 (53%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++  K + D+  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELVAVAKLLSDKEQELQETQHLLHDEN-EDLRKLAENEITSCEKEIAQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK  A   LRAKLY L+L
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQL 300

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE +    + K +I   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 301 --EEETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|114052078|ref|NP_001039843.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
 gi|122135943|sp|Q2KI15|RF1ML_BOVIN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|86826548|gb|AAI12807.1| Mitochondrial translational release factor 1-like [Bos taurus]
          Length = 380

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 163/306 (53%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++  K + D+  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELVAVAKLLSDKEQELQETQHLLHDEN-EDLRKLAENEITSCEKEIAQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK  A   LRAKLY L+L
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQL 300

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE +    + K +I   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 301 --EEETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|153210408|ref|ZP_01947622.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
 gi|120575132|gb|EAX31756.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
          Length = 267

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 137/260 (52%), Gaps = 5/260 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R S +     D  +  +    + L +E   L+  +   ++ Q      +   E 
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEK-AIESAEE 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L+++ L+ E  +   + LL      D  + +LE+ AG GG E+ 
Sbjct: 68  MQQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ 
Sbjct: 128 IFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+R
Sbjct: 188 RVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHK 271
           ITH+PTGVVV+CQ ER   K
Sbjct: 248 ITHLPTGVVVECQDERRNTK 267


>gi|194246573|ref|YP_002004212.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
 gi|193806930|emb|CAP18362.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
          Length = 347

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 92/321 (28%), Positives = 164/321 (51%), Gaps = 9/321 (2%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--DDCSILQETSDNLQRI 95
           N  +   L +E  +L   +    E  +   + L +      +  ++  +L       + +
Sbjct: 24  NSKKKVQLFKEIGNLKEIVDNYNEYLNLEKELLKIKHFIQNDSNNNDDLLNLAFQEQEIL 83

Query: 96  KLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             ++  E K+ + LL      D+ +  +++   AGG E+  ++  L RMY ++AE + +K
Sbjct: 84  NEKIHNELKKIKYLLFPLEPEDNKNVIMQIKGAAGGDEANLFSADLFRMYCKYAELKNWK 143

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L +    + GI S   ++ G   Y +LK E GVHR+ R+   +   R HTS S++ V
Sbjct: 144 LEILNLMTNIKGGISSVEFILSGKKVYYFLKYESGVHRVQRVPTTEVQGRIHTSTSTVLV 203

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P V D I+ +I   D R DT+ +SG GGQ VNTT SAVR+TH+P+ + V CQ  +SQH+
Sbjct: 204 MPEV-DEIDFKIDWKDIRFDTFNSSGPGGQSVNTTKSAVRLTHLPSNISVACQIGKSQHE 262

Query: 272 NKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NK +A+++L+A++Y+ +  Q  E+     +    +     +IR+Y   P   + D R ++
Sbjct: 263 NKKKAFSLLKARIYDKIHKQNMEKENKKRKFLVGDGQRSEKIRTYNY-PQNRITDHRISL 321

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
                  +++G LD  ++  +
Sbjct: 322 NLKKLDIIMEGKLDFIIEPLI 342


>gi|325283363|ref|YP_004255904.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
 gi|324315172|gb|ADY26287.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
          Length = 377

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 16/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIE-AKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
               V     +     DP +          L R  + L   ++  +E +    +     E
Sbjct: 6   LSELVSEFGMVERALGDPAVLAEGGREYTRLTRRHRELSPLVTLYREYETLGQEQQDSRE 65

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L     D  + +     L+RI   +       +   L +   D NDA LE+ +GAGG E+
Sbjct: 66  LLA---DPELREMAQAELERISARLAEVESELEVLLLPTDPLDPNDAVLEIRSGAGGAEA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMY+R+AE    + E L+ ++ +  G       + G  AY  LK E GVHR+
Sbjct: 123 ALFAADLLRMYSRYAESAGLRLEVLDSNESDLGGFAKVVAEVTGEFAYRTLKWESGVHRV 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P V +  E+++  S+ RID +R+ GAGGQ VNTTDSAV
Sbjct: 183 QRVPATESQGRIHTSTVTVAVLPQV-EQSEVQLDLSEVRIDVFRSQGAGGQSVNTTDSAV 241

Query: 251 RITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           R T+    P  ++V CQ  RSQ KN+ +A  +L ++L E E +K++       SS+   G
Sbjct: 242 RATYRAGTPDEIMVVCQDGRSQIKNREKALMILASRLAEREREKQQASEREARSSQIGSG 301

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355
               ++R+Y   P   V D R   E  +     V+ G L++ + A    ++
Sbjct: 302 DRSEKVRTYNY-PQNRVTDHRLEGETKNFPLETVIGGRLEELVGALARQQR 351


>gi|255017364|ref|ZP_05289490.1| peptide chain release factor 2 [Listeria monocytogenes FSL F2-515]
          Length = 231

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 113/231 (48%), Positives = 150/231 (64%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSA
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 231


>gi|152965225|ref|YP_001361009.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
 gi|189039977|sp|A6W7F6|RF1_KINRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151359742|gb|ABS02745.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
          Length = 355

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 163/340 (47%), Gaps = 12/340 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + L  +  DP +  +   A+ L R    L   +      +    D          
Sbjct: 8   LLDEHAELERRLADPAVHADAALARTLGRRYAELGAVVVAHAAWRAAADDAEAA---REL 64

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANML 137
             + +        LQR   E   K    LL     DS D  LE+ AG GG ES  +A  L
Sbjct: 65  AAEDAAFAAELPALQRAAEEAGEKLRRLLLPRDPDDSRDVILEIKAGEGGEESALFAGDL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRLVR 192
           LRMY R+AE+  + TE L+ +  +  G K  ++ +K         +  LK E GVHR+ R
Sbjct: 125 LRMYLRYAERHGWVTEVLDANPSDLGGYKDVSVAVKTRGAAAEGVWHRLKYEGGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS   + V P  ++        +D R+D +R+SG GGQ VNTTDSAVRI
Sbjct: 185 VPVTESQGRVHTSAVGVLVVPEAEEVEVAV-DPNDLRVDVFRSSGPGGQSVNTTDSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311
           TH+PTGVV  CQ E+SQ +N+ QA  +LRA+L+ L  +  +  A+    S+   +    +
Sbjct: 244 THLPTGVVATCQNEKSQLQNREQAMRILRARLHALAQEAADAQASAARRSQVRTVDRSER 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +R+Y       + D RT  +  +   VLDGDLD  +++ +
Sbjct: 304 VRTYNYGE-NRIADHRTGFKAYNLDTVLDGDLDPVIQSAI 342


>gi|326403021|ref|YP_004283102.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
 gi|325049882|dbj|BAJ80220.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
          Length = 352

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 106/343 (30%), Positives = 162/343 (47%), Gaps = 19/343 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72
            D  V R   L        +  +        RE   ++     I  ++  +    +    
Sbjct: 7   LDRIVLRAEELRAMLAA-GV--DGERFVAASRELAEIEPVEQQILLLRAAERARDEAEAA 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
                   D  + +     L  ++  +   + E     L    AD   A LE+   AGG 
Sbjct: 64  R------VDPELRELADAELDSLRETLPRLEHEIRLALLPRDAADERPAILEIRPAAGGD 117

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L   Y R+A+ R ++ E L+  + E  G++     I G   +  LK E GVH
Sbjct: 118 EAALFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGVH 177

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + +++E++E+D RID +RASGAGGQHVN T+S
Sbjct: 178 RVQRVPATETQGRIHTSTVTVAVLPEA-EDVDVEVNEADLRIDVFRASGAGGQHVNKTES 236

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITH+PTG+VV  Q+ERSQHKN+A+A  +LRA+LYE               S+   G 
Sbjct: 237 AVRITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAAAAAGRAADRKSQVGTGD 296

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R N+       V+ G+ D+ + A 
Sbjct: 297 RSERIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIIDAL 338


>gi|190348057|gb|EDK40443.2| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 153/341 (44%), Gaps = 20/341 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +  S L       +   +    +       +L   +         + +   L E+  EE 
Sbjct: 69  KEYSVLEEAITKGNF--D----QETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEET 122

Query: 81  DCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + QE    LQ +    +  V+  Q   L           LE+  G GG+E+  +   
Sbjct: 123 DPEMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGD 182

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+ MY  +A  +K+K   +         +    + I  P +Y  L+ E GVHR+ RI   
Sbjct: 183 LVNMYINFANNKKWKWTKISEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPAT 242

Query: 197 DSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           ++  R HTS +++ V P + +         E + +  + RIDT RA G GGQHVNTTDSA
Sbjct: 243 ETKGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSA 302

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGW 308
           VR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L  LE  K   E   +     T    
Sbjct: 303 VRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDR 362

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
             +IR+Y   P   V D R           + G  L++ ++
Sbjct: 363 SDKIRTYNF-PQNRVTDHRCGFSLHDIDGCMQGYKLEEIIE 402


>gi|296199479|ref|XP_002747187.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Callithrix jacchus]
          Length = 382

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 112/312 (35%), Positives = 162/312 (51%), Gaps = 17/312 (5%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            R  L   +  + E +  L +   LL     +++  + +   + +   + E+   + + +
Sbjct: 60  RRPELVAVVKLLNEKEQELRETEHLL----HDENEDLRKLAENEITLCQKEITQLKHQII 115

Query: 108 L----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
           L    S E D ND  LEV AG GG E+  + + +  MY R+A  +++  E LE    E  
Sbjct: 116 LLLVPSEETDENDLILEVTAGVGGQEAMLFTSEMFDMYQRYAAFKRWHFETLEYFPSEIG 175

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I
Sbjct: 176 GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVI 234

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAK
Sbjct: 235 NPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMKKLRAK 294

Query: 284 LYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           LY   +   EE      + K +I   G   +IR+Y   P   V D R +         + 
Sbjct: 295 LYS--MHLEEETNKRDNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRISKSLHDLQTFMQ 351

Query: 341 GD--LDDFMKAT 350
           GD  LD+ +++ 
Sbjct: 352 GDYLLDELVQSL 363


>gi|291243180|ref|XP_002741481.1| PREDICTED: CG5705-like [Saccoglossus kowalevskii]
          Length = 411

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 106/318 (33%), Positives = 175/318 (55%), Gaps = 10/318 (3%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           + K L R +  L   +  +K+ +++   L +  ILL+ + + +  S+ +E    +     
Sbjct: 72  KLKNLHRRKLELLPIVDLLKKWEEKNVELEEINILLQDSNDNEMISLAKEEKLEMMAAIR 131

Query: 98  EVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           E+E + F  L+  + D +  D  +E+ AG GG E+  +A  +  MY R+A  ++++ + L
Sbjct: 132 ELEDEIFSLLVPKDEDDDTSDVLVEISAGVGGQEAMLFAAEMFEMYQRYAHFQRWQFDVL 191

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           ++   +  GI+ AT+ + GP  Y ++K E GVHR+ R+   +   R HTS  ++ V P  
Sbjct: 192 DVGKSDIGGIRHATVSVSGPGVYSYMKYEGGVHRVQRVPKTEKQGRVHTSTMTVAVLPQP 251

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            + I+++I  SD +I+T RASGAGGQHVNTTDSAVRI H+PTG+  +CQQERSQ KNKA 
Sbjct: 252 RE-IDLQIKPSDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAAECQQERSQIKNKAM 310

Query: 276 AWNMLRAKLYELELQKREEIANIGES-SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A  +L  +LY  +L++++ I            G   +IR+Y       + D R      +
Sbjct: 311 AMKVLETRLYNKQLEEQQHIQRQSRKLQVGSSGRSEKIRTYNFN-QDRITDHRIGQHLHN 369

Query: 335 PSDVLDG--DLDDFMKAT 350
               L G  DL+D +++ 
Sbjct: 370 IDGFLSGGDDLNDLIESL 387


>gi|91762346|ref|ZP_01264311.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718148|gb|EAS84798.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 357

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 178/340 (52%), Gaps = 11/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ + + S L  +     +  +        +E   L+  I   ++      +   L ++
Sbjct: 7   IEDLISKHSVLEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTES 130
             + + D    +     L+ +KLE E  + +  L      EAD  +A +E+ AG GG E+
Sbjct: 65  LSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + ++K++ E + +   E  G+K     I+G N Y  LK E GVHR+
Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I+I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLPEA-EEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  + E E +   +S        
Sbjct: 244 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
            +IR+Y   P   V D R N+        L+G+  D+ ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVE 342


>gi|71083224|ref|YP_265943.1| protein release factor class I [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|119361574|sp|Q4FN99|RF1_PELUB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71062337|gb|AAZ21340.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 357

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 178/340 (52%), Gaps = 11/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ + + S L  +     +  +        +E   L+  I   ++      +   L ++
Sbjct: 7   IEDLISKHSILEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTES 130
             + + D    +     L+ +KLE E  + +  L      EAD  +A +E+ AG GG E+
Sbjct: 65  LSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + ++K++ E + +   E  G+K     I+G N Y  LK E GVHR+
Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I+I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLPEA-EEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  + E E +   +S        
Sbjct: 244 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
            +IR+Y   P   V D R N+        L+G+  D+ ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVE 342


>gi|260944632|ref|XP_002616614.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
 gi|238850263|gb|EEQ39727.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
          Length = 406

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 161/346 (46%), Gaps = 20/346 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +  S L  +        +      +++    + + +      Q  + +   LLE+
Sbjct: 48  VETMTKEFSVLEKQMSSNEF--DQD---TVVK-FSSISSVLDKYHTYQQDMENLSSLLEI 101

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  +++E ++ L+ +   V       +   L      +  A LE+  G GG+E+ 
Sbjct: 102 INEDLDAELVEEANEELKEVVPRVVKASSSLKKRLLPPIVHSNKPAILELRPGVGGSEAA 161

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LL MY  +A    +  + L         +  A + I  P AY  L+ E GVHR+ 
Sbjct: 162 LFTQDLLNMYINFANYMSWPYKILSESHSSNGFLNEAIISIDAPGAYNVLRHESGVHRVQ 221

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVN 244
           RI   +S  R HTS +++ V P + D         E   +  + RIDT R+ G GGQHVN
Sbjct: 222 RIPATESKGRIHTSTAAVVVLPKMSDGTEQSLKEDERSFAPGEIRIDTMRSGGKGGQHVN 281

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSK 303
           TTDSAVRI HIPTG++V  Q ERSQ KNKA+A+++LR++L ++E +K   E   +     
Sbjct: 282 TTDSAVRIVHIPTGIMVVQQDERSQPKNKAKAFSILRSRLAQMEREKEIAEQKKLRSDQV 341

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
           T      +IR+Y   P   V D R N         + G  L++ ++
Sbjct: 342 TTTDRSDKIRTYNY-PQNRVTDHRCNYSVHDLPGFMAGPKLEEMIE 386


>gi|146415684|ref|XP_001483812.1| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 153/341 (44%), Gaps = 20/341 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +  S L       +   +    +       +L   +         + +   L E+  EE 
Sbjct: 69  KEYSVLEEAITKGNF--D----QETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEET 122

Query: 81  DCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + QE    LQ +    +  V+  Q   L           LE+  G GG+E+  +   
Sbjct: 123 DPEMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGD 182

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+ MY  +A  +K+K   +         +    + I  P +Y  L+ E GVHR+ RI   
Sbjct: 183 LVNMYINFANNKKWKWTKILEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPAT 242

Query: 197 DSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           ++  R HTS +++ V P + +         E + +  + RIDT RA G GGQHVNTTDSA
Sbjct: 243 ETKGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSA 302

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGW 308
           VR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L  LE  K   E   +     T    
Sbjct: 303 VRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDR 362

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
             +IR+Y   P   V D R           + G  L++ ++
Sbjct: 363 SDKIRTYNF-PQNRVTDHRCGFSLHDIDGCMQGYKLEEIIE 402


>gi|311243768|ref|XP_003121185.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Sus scrofa]
          Length = 380

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 163/306 (53%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++  K + ++  + L    L  +E    + +   + +   + E+   + + +L    S
Sbjct: 63  ELVAVAKLLTEKERELLETEHLLHDES-EDLRKLAENEIISCQKEIAQLKHQIVLLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            EAD ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY L L
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHL 300

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE +    + K ++   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 301 --EEETSKRYNARKVQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLYDLGTFMQGEYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|15080204|gb|AAH11873.1| Mitochondrial translational release factor 1-like [Homo sapiens]
 gi|119568097|gb|EAW47712.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|119568101|gb|EAW47716.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|312151704|gb|ADQ32364.1| mitochondrial translational release factor 1-like [synthetic
           construct]
          Length = 380

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 298

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EEI     + K +I   G   +IR+Y   P   V D R N         + GD  LD
Sbjct: 299 HLEEEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|284931146|gb|ADC31084.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. F]
          Length = 360

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 163/339 (48%), Gaps = 14/339 (4%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             LN + E   L  +      + +E +     +   +     +   L   ++  +     
Sbjct: 19  QKLNKELE--SLTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKIINDNTMKE 76

Query: 84  ILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
             +    +L   K ++   + +       +   D  +  +E+   AGG ES  +   +  
Sbjct: 77  FHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDESSIFVGNMFD 136

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           +Y  +  K  +K   +E+      G    +  I G + Y  +K E GVHR+ R+   ++ 
Sbjct: 137 LYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRVQRVPATEAK 195

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  +I V P   D +EIEI+ +D RIDTYRASGAGGQHVN T+SAVRITHIPTG+
Sbjct: 196 GRVHTSTITIAVLPQ-QDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVRITHIPTGI 254

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           V  CQ+ +SQ  N+  A  MLR+KL+E    ++E+   +    K ++G G    +IR+Y 
Sbjct: 255 VAACQEGKSQIANRETAMKMLRSKLWEAA--EKEKNDALSALRKNQVGSGDRAEKIRTYN 312

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             P   V D R N+   S    + G++D+ + A  + ++
Sbjct: 313 Y-PQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQ 350


>gi|294660260|ref|NP_852919.2| peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|46576715|sp|Q7NBX3|RF1_MYCGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|284811917|gb|AAP56487.2| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930381|gb|ADC30320.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(high)]
          Length = 360

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 100/339 (29%), Positives = 163/339 (48%), Gaps = 14/339 (4%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             LN + E   L  +      + +E +     +   +     +   L   ++  +     
Sbjct: 19  QKLNKELE--SLTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKIINDNAMKE 76

Query: 84  ILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
             +    +L   K ++   + +       +   D  +  +E+   AGG ES  +   +  
Sbjct: 77  FHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDESSIFVGNMFD 136

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           +Y  +  K  +K   +E+      G    +  I G + Y  +K E GVHR+ R+   ++ 
Sbjct: 137 LYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRVQRVPATEAK 195

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  +I V P   D +EIEI+ +D RIDTYRASGAGGQHVN T+SAVRITHIPTG+
Sbjct: 196 GRVHTSTITIAVLPQ-QDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVRITHIPTGI 254

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           V  CQ+ +SQ  N+  A  MLR+KL+E    ++E+   +    K ++G G    +IR+Y 
Sbjct: 255 VAACQEGKSQIANRETAMKMLRSKLWEAA--EKEKNDALSALRKNQVGSGDRAEKIRTYN 312

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             P   V D R N+   S    + G++D+ + A  + ++
Sbjct: 313 Y-PQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQ 350


>gi|332213665|ref|XP_003255945.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 380

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 161/306 (52%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 298

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD
Sbjct: 299 HLEEETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|148988472|ref|ZP_01819919.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
 gi|147926153|gb|EDK77227.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
          Length = 294

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 88/287 (30%), Positives = 142/287 (49%), Gaps = 8/287 (2%)

Query: 75  LALEED-DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTE 129
           +  E   D  + +     L+  K E E  +       L     D  +  LE+   AGG E
Sbjct: 1   MIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 60

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR
Sbjct: 61  AALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 120

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P V + +E +I   D R+D Y ASGAGGQ+VN   +A
Sbjct: 121 VQRVPVTESQGRVHTSTATVLVMPEV-EEVEYDIDPKDLRVDIYHASGAGGQNVNKVATA 179

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGW 308
           VRI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +      ++E     +S+      
Sbjct: 180 VRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDR 239

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 240 SERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 285


>gi|166795303|ref|NP_061914.3| peptide chain release factor 1-like, mitochondrial isoform a [Homo
           sapiens]
 gi|74753314|sp|Q9UGC7|RF1ML_HUMAN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; AltName: Full=mtRF1a; Flags: Precursor
 gi|6706658|emb|CAB65994.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|158254756|dbj|BAF83351.1| unnamed protein product [Homo sapiens]
          Length = 380

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 111/306 (36%), Positives = 162/306 (52%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 298

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EEI     + K +I   G   +IR+Y   P   V D R N         + GD  LD
Sbjct: 299 HLEEEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|114609863|ref|XP_518818.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 6 [Pan troglodytes]
          Length = 380

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 109/306 (35%), Positives = 161/306 (52%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ I+ + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 298

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD
Sbjct: 299 HLEEETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|148260023|ref|YP_001234150.1| peptide chain release factor 1 [Acidiphilium cryptum JF-5]
 gi|166223523|sp|A5FX99|RF1_ACICJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146401704|gb|ABQ30231.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
          Length = 352

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 160/340 (47%), Gaps = 13/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   L        +  +        RE   ++     I  ++            
Sbjct: 7   LDRIVLRAEELRAMLAA-GV--DGERFVAASRELAEIEPVEQQILLLRAAERARDEAEAA 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             +     + +     L  ++  +   + E     L    AD   A LE+   AGG E+ 
Sbjct: 64  RAD---PELRELADAELDSLRETLPRLEHEIRLALLPRDAADERPAILEIRPAAGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L   Y R+A+ R ++ E L+  + E  G++     I G   +  LK E GVHR+ 
Sbjct: 121 LFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +++E++E+D RID +RASGAGGQHVN T+SAVR
Sbjct: 181 RVPATETQGRIHTSTVTVAVLPEA-EDVDVEVNEADLRIDVFRASGAGGQHVNKTESAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV  Q+ERSQHKN+A+A  +LRA+LYE               S+   G    
Sbjct: 240 ITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAAAAAGRAADRKSQVGTGDRSE 299

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   V D R N+       V+ G+ D+ + A 
Sbjct: 300 RIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIIDAL 338


>gi|296128915|ref|YP_003636165.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
 gi|296020730|gb|ADG73966.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
          Length = 392

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 11/340 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +     DP +  +   A+ L R    L   +   ++ +    D       
Sbjct: 36  VEAMLAEHAQIERDLADPAVHADAARARRLGRRYAELGRVVQAYRQWRAAADDAQAAA-- 93

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            L  +D S   E            E      +     D  D  LE+ AG GG ES  +A 
Sbjct: 94  ELAAEDASFATEVPALQAAADEAAERLHRVLVPRDPDDGRDVILEIKAGEGGEESALFAG 153

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMYTR+AE++ +  + L+  + +  G+K A + +K           +  LK E GVH
Sbjct: 154 DLLRMYTRYAERQGWSVQVLDATESDLGGVKDAQVAVKARAAGPPEDGVWAHLKYEGGVH 213

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V+P  DD  +++I ++D RID YR+SG GGQ VNTTDS
Sbjct: 214 RVQRVPVTESQGRIHTSAAGVMVFPEADDDGDVDIDQNDLRIDVYRSSGPGGQSVNTTDS 273

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L     ++    A+    S+   + 
Sbjct: 274 AVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASEARRSQVRTVD 333

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              +IR+Y   P   + D RT  +  +   VLDGDL   +
Sbjct: 334 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLDGDLGPVI 372


>gi|221128345|ref|XP_002163029.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 400

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 177/330 (53%), Gaps = 8/330 (2%)

Query: 16  WDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            ++ + +   LN K  D  +L     E K    E   +  A+     +  +  + + L  
Sbjct: 43  IEDVMFKYKQLNEKLLDSKNLT--PTEIKNYSSECHRMKPAVEIYNLLLKKREEIIELAA 100

Query: 75  LALE-EDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQD 132
           L ++ ++    +QE     Q    ++E +  +S+    + DSN+A +E+ AG GG E+  
Sbjct: 101 LGIDNKEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAAI 160

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  +L MY +++   ++K E L+  +  + G+K  ++ I G   +G LK E GVHR+ R
Sbjct: 161 FAAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQR 220

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P   +SI++ ++  D ++DT+R+SGAGGQHVNTTDSAVR+
Sbjct: 221 VPITESLGRVHTSTVTVAVLPQP-ESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRL 279

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311
           THIP+G+VV  Q +RSQ +NK++A  +L A+LY+ E  +  +E   +  +         +
Sbjct: 280 THIPSGLVVAVQSQRSQIENKSRALKILSAQLYDFERTRVVQERVELRRTQIGSGHRSER 339

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           IR+Y   P   + D R     +  SD + G
Sbjct: 340 IRTYNF-PQDRITDHRIGETLSGLSDFMLG 368


>gi|145348023|ref|XP_001418457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578686|gb|ABO96750.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 373

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 183/348 (52%), Gaps = 13/348 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + A++R   L        +  ++       +E   ++      + ++    +   L EL 
Sbjct: 22  EAALRRREELIALISRQGV--DIDRVVEANKELSRIEPIAEQYEVVKKLRAEKASLEELV 79

Query: 77  LEE----DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGT 128
            +     D   + +   + L+ + +++  ++       L   +AD   A LEV AGAGG 
Sbjct: 80  RDASSGGDSKELAELAREELRAVDIDLPDQELALQLLFLPHDDADDRGAILEVRAGAGGD 139

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY   A K  ++ + L + + +  G++ A+  I G   +G LK E GVH
Sbjct: 140 EAALFAAELFRMYALHARKSGWRFDTLNVSETDGKGVREASAEILGKGVFGRLKFESGVH 199

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +SI V P   + +E++I E D RIDT RASGAGGQHVNTT+S
Sbjct: 200 RVQRVPETETQGRVHTSTASIAVLPHA-EEVEMDIKEEDVRIDTMRASGAGGQHVNTTNS 258

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVR+TH PTG+ V  Q ERSQHKNKA+A+++L+A+LY+LE +K  +  +   SS    G 
Sbjct: 259 AVRLTHAPTGIQVVIQDERSQHKNKAKAFSVLKARLYDLEREKMAKERSELRSSLIGTGD 318

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y       VKD R     +  + ++DG L D +   L  K+
Sbjct: 319 RSERIRTYNFA-QGRVKDHRVEGTISDVNALMDGFLLDEITEKLKRKR 365


>gi|262341278|ref|YP_003284133.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272615|gb|ACY40523.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 361

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 180/345 (52%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + + +    ++     P++  +  + K+L+++   L+  +S  ++   +L        +
Sbjct: 10  LEGSKKEFYEISKSIIQPNIISDQKKYKILLKKYLKLEKIVSLYEKYNKKLALLQEADFI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGE-----ADSNDAYLEVHAGA 125
              + D  + +  S    +I   +   + ES      LS E      +  +A +E+ +G 
Sbjct: 70  LKNDSDADLKELASIEKYKILENLSSIEKESYDLIFSLSNETEETTENHRNAIVELRSGT 129

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKGE 184
           GG E+  +   +LRMYT + +K  +K + +    G   G K   L + G    YG LK E
Sbjct: 130 GGDEACLFVEDILRMYTMYFKKSGWKYKIIHAQKGGIKGYKEIILDVNGKEGVYGNLKFE 189

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ RI   +S  R HTS  ++ V P V D IE+ I+ SD + +T+R+SGAGGQHVN
Sbjct: 190 SGVHRVQRIPKTESQGRVHTSAITVAVLPQVKD-IEVNINLSDIKKETFRSSGAGGQHVN 248

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+TH+P+ + V+CQ+ERSQHKN  +A N+LR+++Y+ E +KR +  +I   S  
Sbjct: 249 KTESAVRLTHLPSKITVECQEERSQHKNFEKAINVLRSRIYQNEKEKRLKEISIKRKSLV 308

Query: 305 EIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             G    +IR+Y   P   V D R +      +  ++G++ + + 
Sbjct: 309 STGDRSVKIRTYNY-PKSRVTDHRIHKSIYDLAGFMNGNIQEMIN 352


>gi|118088382|ref|XP_419682.2| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Gallus gallus]
          Length = 394

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 110/304 (36%), Positives = 169/304 (55%), Gaps = 13/304 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
              + I+ ++D+  +     ELAL+++   + +     +   + E+   + + +L    S
Sbjct: 75  ELAARIQRLRDKERELQDTRELALQDESEDLRKLAEREIVSCEEEIAELKHQIVLLLIPS 134

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D++D  +EV AG GG E+  + + +  MY R+A  +K+K E LE    E  G++ A 
Sbjct: 135 EETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAV 194

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G +AY ++K E GVHR+ R+   +   R HTS  ++ + P   + +E++I+  D R
Sbjct: 195 ASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MELKINPKDLR 253

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           I+T RASGAGGQHVNTTDSAVRI HIPTGV  +CQQERSQ +NK +A  ML AKLY ++L
Sbjct: 254 IETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQMLCAKLYNIKL 313

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE      + K +I   G   +IR+Y   P   + D R +         + G+  LD
Sbjct: 314 --EEENKKRNSARKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVHHTECFMLGEEMLD 370

Query: 345 DFMK 348
           + +K
Sbjct: 371 EMIK 374


>gi|149038509|gb|EDL92839.1| rCG41113 [Rattus norvegicus]
          Length = 384

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 109/309 (35%), Positives = 162/309 (52%), Gaps = 17/309 (5%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--- 107
            L  A   + E +  L D   LL     +++  + +     +   + E+   +   +   
Sbjct: 67  QLAAAARLLNEKERELRDTESLL----HDENEDLKKLAESEIALCQKEIAELKHRIISLL 122

Query: 108 -LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
             S + D +D  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++
Sbjct: 123 VPSEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLR 182

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+  I GP AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I++ I+  
Sbjct: 183 HASASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTE-IKLVINPK 241

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+  A   LRA+LY 
Sbjct: 242 DLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYS 301

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342
           + L   EE A    + K ++G      +IR+Y   P   V D R N         + GD 
Sbjct: 302 MRL--EEETAKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDC 358

Query: 343 -LDDFMKAT 350
            LDD +++ 
Sbjct: 359 LLDDLIQSL 367


>gi|255083621|ref|XP_002508385.1| predicted protein [Micromonas sp. RCC299]
 gi|226523662|gb|ACO69643.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 113/325 (34%), Positives = 170/325 (52%), Gaps = 15/325 (4%)

Query: 17  DNAVQRLSFLNTK---TEDPHLWQNVIEAKMLM---RERQHLDNAISFIKEIQDRLCDNL 70
               +RL  ++ +        +      A  +    +E    +  +     +++R  +  
Sbjct: 3   PALERRLEAVSARHDALVAALVADPPPRAAEIARINKELARAERVVRAYAAVKERRHETA 62

Query: 71  ILLELALEED--DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAG 124
            L ++  E    D  + Q   D L  ++      +       L + EAD +   LEV AG
Sbjct: 63  SLEQVIAESAGVDAEMAQMAEDELATLEETTPALEETLAHLLLPADEADDSGVILEVRAG 122

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  LLRMY  +A K  ++ E +  +  E  G+K AT  + G + YG LK E
Sbjct: 123 AGGDEAALFAADLLRMYEMFARKTGWRFELVAANASEAGGVKEATASLAGDDVYGRLKFE 182

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   ++  R HTS +S+ V P   +++E++I + D +IDT RASGAGGQHVN
Sbjct: 183 SGVHRVQRVPATETQGRVHTSTASVAVLPQA-ETVELDIRDDDLKIDTMRASGAGGQHVN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSK 303
           TT+SAVRITH+PTGV V  Q ERSQHKNK +A  +LRA++YELE +K  +  A+   S  
Sbjct: 242 TTNSAVRITHVPTGVTVVMQDERSQHKNKEKAMKVLRARVYELERRKLADARADQRRSLI 301

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRT 328
                  ++R+Y  +    VKD R 
Sbjct: 302 GSGDRSERVRTYNYKE-GRVKDHRV 325


>gi|297679452|ref|XP_002817544.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 1 [Pongo abelii]
          Length = 380

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 110/306 (35%), Positives = 161/306 (52%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRQAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 298

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD
Sbjct: 299 HLEEETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMRGDYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|301786516|ref|XP_002928673.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 380

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 108/306 (35%), Positives = 163/306 (53%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++  K + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAAAKLLSEKEQELQETEHLLHDEN-EDLRKLAENEITSCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D+ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ V P   + I + I+  D R
Sbjct: 182 ASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + L
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYL 300

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE +    + K ++   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 301 --EEETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|281345517|gb|EFB21101.1| hypothetical protein PANDA_018665 [Ailuropoda melanoleuca]
          Length = 379

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 108/306 (35%), Positives = 163/306 (53%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++  K + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAAAKLLSEKEQELQETEHLLHDEN-EDLRKLAENEITSCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D+ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ V P   + I + I+  D R
Sbjct: 182 ASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + L
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYL 300

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE +    + K ++   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 301 --EEETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|292620387|ref|XP_002664272.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Danio rerio]
 gi|220679232|emb|CAX12803.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 431

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 14/305 (4%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---- 107
           L + +  IK+++ +  +   + +L  + +D  +L+      + +  +++  + + L    
Sbjct: 110 LAHLVHNIKKLEVKQKEMEDMQDLLKD-NDPELLELAETEKEAVLADIQDLRQKILSLLI 168

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
              E+D ++  LEV AG GG E+  +   +  MY  +A    +  + LE +  E  G++ 
Sbjct: 169 PEEESDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRH 228

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           A+  + GP +Y  LK E GVHR+ R+   +S  R HTS  ++ + P   + I   I+  D
Sbjct: 229 ASASVSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTE-ISFTINPKD 287

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            +I+T RASGAGGQHVNTTDSAVRITH+PTG V +CQQERSQ KNK  A  +LRAKLY  
Sbjct: 288 LKIETKRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSA 347

Query: 288 ELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342
            L   EE +   ++ K +I   G   +IR+Y  Q    + D R           L G+  
Sbjct: 348 RL--EEETSRRYQARKLQIGTRGRSEKIRTYNFQ-QDRITDHRIGKTVHDVHGFLQGEEL 404

Query: 343 LDDFM 347
           L++ +
Sbjct: 405 LEEMI 409


>gi|326915756|ref|XP_003204179.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Meleagris gallopavo]
          Length = 393

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 107/303 (35%), Positives = 166/303 (54%), Gaps = 12/303 (3%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE---SLLSG 110
              + I+ ++D+  +     ELAL+++   + +     +   + E+   + +    L+  
Sbjct: 75  ELAARIQRLRDKERELRDTRELALQDESEDLRKLAEREIVSCEEEIAELKHQIVLLLIPS 134

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E  ++D  +EV AG GG E+  + + +  MY R+A  +K+K E LE    E  G++ A  
Sbjct: 135 EETNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAVA 194

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G +AY ++K E GVHR+ R+   +   R HTS  ++ + P   + +E++I+  D RI
Sbjct: 195 SIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MELKINPKDLRI 253

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASGAGGQHVNTTDSAVRI HIPTGV  +CQQERSQ +NK +A  ML AKLY ++L 
Sbjct: 254 ETKRASGAGGQHVNTTDSAVRIVHIPTGVASECQQERSQIRNKEKAMQMLCAKLYNIKL- 312

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE        K +I   G   +IR+Y   P   + D R +         + G+  LD+
Sbjct: 313 -EEETKKRNSVRKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVHHIECFMLGEEMLDE 370

Query: 346 FMK 348
            ++
Sbjct: 371 MIQ 373


>gi|331657262|ref|ZP_08358224.1| peptide chain release factor 1 [Escherichia coli TA206]
 gi|331055510|gb|EGI27519.1| peptide chain release factor 1 [Escherichia coli TA206]
          Length = 323

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 130/262 (49%), Gaps = 7/262 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNK 273
           ITH+PTG+++  +      K K
Sbjct: 246 ITHLPTGLLLNVRTNVHNIKTK 267


>gi|30425080|ref|NP_780583.1| peptide chain release factor 1-like, mitochondrial precursor [Mus
           musculus]
 gi|81874010|sp|Q8BJU9|RF1ML_MOUSE RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|26347595|dbj|BAC37446.1| unnamed protein product [Mus musculus]
 gi|74186873|dbj|BAE20502.1| unnamed protein product [Mus musculus]
 gi|148671619|gb|EDL03566.1| mitochondrial translational release factor 1-like [Mus musculus]
          Length = 373

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 17/309 (5%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--- 107
            L  A   + E +  L D   LL     +++  + +     +   + ++   + + +   
Sbjct: 56  QLAAAARLLSEKERELRDTESLL----HDENEDLKKLAESEIALCQKQITELKHQIISLL 111

Query: 108 -LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
             S E D +D  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++
Sbjct: 112 VPSEEMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLR 171

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+  + GP AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I++ I+  
Sbjct: 172 HASASVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-IKLVINPK 230

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+  A   LRA+LY 
Sbjct: 231 DLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYS 290

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342
             +   EE A    + K ++G      +IR+Y   P   V D R N         + GD 
Sbjct: 291 --MHLEEETAKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDC 347

Query: 343 -LDDFMKAT 350
            LDD +++ 
Sbjct: 348 LLDDMIQSL 356


>gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 357

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 173/342 (50%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + + S L        L           +E   +   I   K+      D   L  +
Sbjct: 7   IEELILKHSTLEKDLSSRDL--EKKVFAEKSKEYSDISEVIVSAKKYLSYEKDKKELENI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTES 130
             +   D  + +     L  +K E E  + +  L      EAD  +A +E+ AG GG E+
Sbjct: 65  LNDNSVDEELKKLADTELLELKDEYERNEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L +MY + + K+K+  E + I   +  G+K     IKG N Y  LK E GVHR+
Sbjct: 125 SLFASDLFKMYEKVSHKKKWALELISISRSDAGGLKEVIASIKGTNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I+E+D RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLPEA-EEVDLKINEADLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q E+SQHKNKA+   +LR++LYELE  +  +E +   ++        
Sbjct: 244 RITHIPTGLTVSQQDEKSQHKNKAKGMKILRSRLYELERSRIDQERSQDRKTKIGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+      + L+G+  D+ +++ 
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHRLEEFLEGEAFDEMIESL 344


>gi|159462370|ref|XP_001689415.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158283403|gb|EDP09153.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 263

 Score =  225 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 103/256 (40%), Positives = 149/256 (58%), Gaps = 9/256 (3%)

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +   LL G  D   A L + AGAGG ++ DWA ML RMY RWAE   ++   L+   G+
Sbjct: 1   WELRRLLCGPYDDRGARLTISAGAGGVDAMDWAEMLERMYMRWAEAGGYQVAVLDRAAGD 60

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV--VDDSI 219
           EAGI        G +AYG+L+ E+G HRLVR SP+++   R TSF+ + V PV   DD  
Sbjct: 61  EAGITG------GRHAYGYLRCEKGTHRLVRNSPFNAKGLRQTSFAGVDVMPVLGPDDLP 114

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E++++E D  I T R+ G GGQ+VN  ++ VRI H+PTG+ V+C QERSQ +NKA A ++
Sbjct: 115 ELDLNEKDLEITTMRSGGKGGQNVNKVETGVRILHVPTGLAVKCTQERSQAQNKAIALDL 174

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           L+A+L     +   E A     +  +      +++  +  PY++VKD RT  E +    V
Sbjct: 175 LKARLLANSREPPMEEAGSRMGAVADCNTHAHRVQGCLFHPYKLVKDTRTGTETSDVQAV 234

Query: 339 LDGDLDDFMKATLAIK 354
           +DG+L  FM A L  +
Sbjct: 235 MDGELGGFMAAVLRQR 250


>gi|302759761|ref|XP_002963303.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
 gi|300168571|gb|EFJ35174.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
          Length = 391

 Score =  225 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 163/342 (47%), Gaps = 33/342 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   R + L+    +P +     +   + +E ++LD ++  IK ++ +  + + L EL  
Sbjct: 57  SIEDRHACLSEALLEPGIAS--EKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVK 114

Query: 78  EE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ--DWA 134
           E  +D  + +  S  LQ    EV   Q + LL  E    D      AG         D  
Sbjct: 115 ESVEDEEMRRLASGELQTATREVRDAQHDVLL--ELIPKDEAARSRAGKCSLMCLMFDMF 172

Query: 135 NMLLR--MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +++ R   Y ++A    ++ E L I   +  G K A+  I G   YG LK E GVHR+ R
Sbjct: 173 HLIFRSWRYDKYAANNSWRFEVLSITTTDTRGYKEASAAISGDGVYGALKFESGVHRVQR 232

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS +S+ + P  ++ +++EI   + +IDTYRA GAGGQHVNTT SAVR+
Sbjct: 233 VPVTEKAGRIHTSTASVAILPEANE-VDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRV 291

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH PTG+VV  Q  R                LYELE  +    A+  E  + +IG     
Sbjct: 292 THAPTGIVVAIQDTR----------------LYELERSR--AAASRSELRQDQIGSSDRS 333

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
            +IR+Y   P   V D R  + + +   +++G  L+ F+ A 
Sbjct: 334 ERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEGIGLEIFVNAL 374


>gi|329942484|ref|ZP_08291294.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
 gi|328815394|gb|EGF85382.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
          Length = 272

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 114/216 (52%), Positives = 153/216 (70%)

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D  + ++        +  +   + + LLSGE D N  +L ++AGAGGTES DW  ML RM
Sbjct: 16  DPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRM 75

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWA + ++K E ++  +G+ AGIK  T+   G  AYG+ K E+GVHRLVRISP+DSN+
Sbjct: 76  YCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAERGVHRLVRISPFDSNA 135

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG++
Sbjct: 136 KRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGIM 195

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           V CQ+ERSQ +N+     MLRA++Y+  LQ+R E  
Sbjct: 196 VSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQ 231


>gi|291397162|ref|XP_002714988.1| PREDICTED: mitochondrial translational release factor 1-like
           [Oryctolagus cuniculus]
          Length = 380

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 104/306 (33%), Positives = 160/306 (52%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++  K + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELVAAAKLLSEKEQELRETEHLLRDEN-EDLRRLAENEITLCQKEITQLKQQIVLLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLVLEVTAGIGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + ++  D R
Sbjct: 182 ASIGGSEAYKLMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTE-INLVVNPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KN+  A   L AKLY   +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNREMAMKKLCAKLYS--M 298

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE +    + K ++   G   +IR+Y   P   V D R N         + GD  LD
Sbjct: 299 HLEEETSKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSVHDLEAFMKGDYQLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 EMIQSL 363


>gi|149409336|ref|XP_001510216.1| PREDICTED: similar to low density lipoprotein receptor-related
           protein 10 [Ornithorhynchus anatinus]
          Length = 380

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 107/286 (37%), Positives = 151/286 (52%), Gaps = 13/286 (4%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTE 129
           EL + ++D  + +     +   + E+        F  + S EAD ND  LE+ AG GG E
Sbjct: 82  ELLMHDEDEELRKLAESEIITCQKEIAELNRQIVFLLIPSEEADENDLILELTAGIGGQE 141

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   +  MY ++A  +K+  E LE    E  G++ AT  I G  AY  LK E GVHR
Sbjct: 142 AMLFTAEMFDMYEQYAAYKKWHFETLEYFPSEIGGLRHATASIGGHEAYKHLKFEGGVHR 201

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +   R HTS  ++ V P   + I + I   D RI+T RASGAGGQHVNTTDSA
Sbjct: 202 VQRVPKTERQGRTHTSTMTVAVLPQPTE-INLVIHPKDLRIETKRASGAGGQHVNTTDSA 260

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--- 306
           VRI H+PTG+  +CQQERSQ KN+  A   LRAKLY ++L   EE +    + K +I   
Sbjct: 261 VRIVHVPTGIASECQQERSQLKNREMAMKKLRAKLYSIQL--EEETSKRYSARKIQIGTK 318

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
           G   +IR+Y       V D R +         + G+  LD+ + + 
Sbjct: 319 GRSEKIRTYNFS-QDRVTDHRISKSFHDIESFMLGERLLDELIHSL 363


>gi|149744102|ref|XP_001501636.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Equus caballus]
          Length = 380

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 106/306 (34%), Positives = 161/306 (52%), Gaps = 14/306 (4%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++  + + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELVAVARLLSEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E + ND  LEV AG GG E+  + + +  MY R+A  +++  E LE    E  G++ A+
Sbjct: 122 EETNENDLILEVTAGVGGQEAMLFTSEIFDMYQRYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY   +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYS--M 298

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE +    + K +I   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 299 HVEEETSKRYNARKVQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGENLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|71043904|ref|NP_001020894.1| peptide chain release factor 1-like, mitochondrial precursor
           [Rattus norvegicus]
 gi|81907899|sp|Q4V7E5|RF1ML_RAT RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|66910900|gb|AAH97970.1| Mitochondrial translational release factor 1-like [Rattus
           norvegicus]
          Length = 373

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 109/309 (35%), Positives = 162/309 (52%), Gaps = 17/309 (5%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--- 107
            L  A   + E +  L D   LL     +++  + +     +   + E+   +   +   
Sbjct: 56  QLAAAARLLNEKERELRDTESLL----HDENEDLKKLAESEIALCQKEIAELKHRIISLL 111

Query: 108 -LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
             S + D +D  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++
Sbjct: 112 VPSEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLR 171

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+  I GP AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I++ I+  
Sbjct: 172 HASASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTE-IKLVINPK 230

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+  A   LRA+LY 
Sbjct: 231 DLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYS 290

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342
           + L   EE A    + K ++G      +IR+Y   P   V D R N         + GD 
Sbjct: 291 MRL--EEETAKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDC 347

Query: 343 -LDDFMKAT 350
            LDD +++ 
Sbjct: 348 LLDDLIQSL 356


>gi|301617313|ref|XP_002938091.1| PREDICTED: LOW QUALITY PROTEIN: peptide chain release factor 1,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 446

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 168/351 (47%), Gaps = 25/351 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  +    L        + ++   +    R    L   I  +++I++   D   L EL
Sbjct: 79  LQSLSKEHERLTEMLGQTSVREDDRRSA--SRRHSELSRLIGLLRDIKETEQDVREL-EL 135

Query: 76  A-------LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAG--A 125
                    E    ++  E  + L++   ++  K  ++LL  E  D NDA LEV +G   
Sbjct: 136 MCAGKNXLEEGQMLALALEEKNTLKQNINKLRGKLLQALLPHEKYDMNDAVLEVTSGRTT 195

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG   Q +   +  MY  +A  + +  E L     E  G+  A   I G   Y  LK E 
Sbjct: 196 GGDICQQFTKEIFDMYQNYAYYKSWSFEILNYSPAEYGGLHHAAARISGEGVYKRLKYEG 255

Query: 186 GVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           G HR+ RI     +SR    HT   ++ V P   D +E++I   D RIDT+R+ GAGGQH
Sbjct: 256 GTHRVQRIPEVGLSSRMQRIHTGTMTVIVLPQP-DEVEVKIDSKDLRIDTFRSKGAGGQH 314

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRI HIPTG+ V+CQQERSQ  NK +A  +LR +LY  E    +E+     + 
Sbjct: 315 VNTTDSAVRIVHIPTGIAVECQQERSQIANKEKALRILRMRLY--EQTVEQELLERRSAR 372

Query: 303 KTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMK 348
           K ++G      +IR+Y       + D R + E  +  + L+G+  LDD ++
Sbjct: 373 KLQVGTRAQSERIRTYNF-TQDRLTDHRIHYEVRNIKEFLNGEELLDDLIQ 422


>gi|255716670|ref|XP_002554616.1| KLTH0F09482p [Lachancea thermotolerans]
 gi|238935999|emb|CAR24179.1| KLTH0F09482p [Lachancea thermotolerans]
          Length = 400

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 157/347 (45%), Gaps = 21/347 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   + L  L           +V       ++   L   +         +     L ++ 
Sbjct: 40  EKYAEELKALEKWMAKGEGTFDVER----QKKFSRLCAVVDSFHRYSREIELLKDLQDMM 95

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              DD S+  E    +  I+ ++E        + L           LE+  G GG E+  
Sbjct: 96  K--DDPSLRDEAQQEMAEIRPQLEKTSSSLLGQLLPPHPFADRPCILEIRPGVGGIEAMI 153

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           +A  LL MY  +A  +++K   +     E   GI  A L I  P +Y  L+ E GVHR+ 
Sbjct: 154 FAQDLLGMYINYAHNKRWKYHIISQSANESGSGIVDAILSIDEPGSYDKLRFEAGVHRVQ 213

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-------ISESDCRIDTYRASGAGGQHVN 244
           RI   ++  R HTS +++ V P + +  E E           + RID  RA G GGQHVN
Sbjct: 214 RIPATETKGRTHTSTAAVVVLPQMAEDNEKEAESYERTFKPDEIRIDVMRARGKGGQHVN 273

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSK 303
           TTDSAVR+TH P+G+V+  Q ERSQHKNKA+A+ +LRA+L E+E + +EE A        
Sbjct: 274 TTDSAVRLTHYPSGIVINMQNERSQHKNKAKAFAILRARLAEIEQKAKEEKARAARKGQV 333

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           +      ++R+Y   P   + D R          ++ G+ LDD + A
Sbjct: 334 STTDRSDKVRTYNF-PQNRITDHRCGFNLHDMEGIMAGERLDDVIDA 379


>gi|254572401|ref|XP_002493310.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033108|emb|CAY71131.1| hypothetical protein PAS_chr3_1249 [Pichia pastoris GS115]
 gi|328352673|emb|CCA39071.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435]
          Length = 405

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 163/344 (47%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               +L  L +K      +          R+   L + +    E      +   L  +  
Sbjct: 47  RLSSQLKDLESKLSSSDEFSYQD-----SRDYSLLVSTVETYNEFLRETENVEELQRMLH 101

Query: 78  EEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E  D S+ +E    L     ++K      + + L   E       LE+  G GG+E+  +
Sbjct: 102 E--DPSLKEEIESELTQAAPKLKRLTSKLKTKLLPPHEFADKPCILELRPGIGGSEANLF 159

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
              LL MY ++A+  ++  E +  +      G+  A ++I  P +Y  L+ E GVHR+ R
Sbjct: 160 TEDLLSMYEKYAQHHRWSYEIISRNPHPSGNGLVDAAIVINEPGSYNRLRFEAGVHRVQR 219

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           +   +S  R HTS +++ V P +D+   S+       D RID  RASG+GGQHVNTT+SA
Sbjct: 220 VPATESKGRTHTSTAAVVVLPKIDEDDTSLNRTFLPDDIRIDVMRASGSGGQHVNTTESA 279

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308
           VR+THIP+G+VV  Q ERSQHKNKA+A  +L+A+L E E  ++EE      +   +    
Sbjct: 280 VRVTHIPSGIVVLIQDERSQHKNKAKALTILKARLAEKERVEKEEKELAERKGQVSSTDR 339

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATL 351
             +IR+Y       + D R      +    L+G  LD+ + A L
Sbjct: 340 SDKIRTYNFS-QNRITDHRCGYSLHNVEGCLNGYKLDEIIDALL 382


>gi|210076204|ref|XP_504279.2| YALI0E22759p [Yarrowia lipolytica]
 gi|199426952|emb|CAG79876.2| YALI0E22759p [Yarrowia lipolytica]
          Length = 389

 Score =  222 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 21/339 (6%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
                    P+  ++  + K L+ +   L      +   ++ +     L+ +    DD  
Sbjct: 44  KEYEALQASPN--EDQFKDKKLIAKINLLGQVTHELDSYRNSIVQYDELMSMC---DDPE 98

Query: 84  ILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           + ++  D +  ++ E E      +   L +         +E+  G GG E+  + + LL 
Sbjct: 99  LKKDAEDEIPTVEAEAEKAIKKLETLLLPTHPYGDIGCIIEMRPGIGGEEACLFTDNLLN 158

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MYT +A++  +  +   +   ++ GI    L + G  +Y  L+ E GVHR+ R+   +S+
Sbjct: 159 MYTGYADEMGWPYQITNVTRNDKGGITEVILSVDGEGSYNMLQHEGGVHRVQRVPVTESS 218

Query: 200 SRRHTSFSSIWVYPVVDDS----IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            R HTS +++ V P + +S     +I+ +  + RID  RA GAGGQHVN T+SAVR+ HI
Sbjct: 219 GRVHTSAAAVIVLPQISESSVAADDIQFAPGEVRIDVMRAQGAGGQHVNKTESAVRLVHI 278

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQI 312
           PT  +V  Q  RSQ +NK  A+ +LR +L   E ++RE+ A    +  +++       +I
Sbjct: 279 PTKTMVVMQNSRSQRQNKEMAFMILRGRL--AEQKRREQAAKSKNARTSQVSATDRSDKI 336

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
           R+Y       V D R      +   V+ G  LD  ++A 
Sbjct: 337 RTYNFH-QNRVTDHRCGY-SGNLDVVMSGKKLDAVLEAL 373


>gi|326436517|gb|EGD82087.1| peptide chain release factor 2 [Salpingoeca sp. ATCC 50818]
          Length = 449

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 109/350 (31%), Positives = 171/350 (48%), Gaps = 21/350 (6%)

Query: 16  WDNAVQRLSFLNT---KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            D  ++R   L T   +  +     +        +     D          D   +   L
Sbjct: 81  LDRVLERRRDLQTTIVRLAEEG---DSESVVEKTQLLAKTDALAEAASAWFDLSKEMEEL 137

Query: 73  LELALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLS-GEADSNDAYLEVHAGAGGT 128
             +   E D  +       L+ ++    EVE     +++   +AD   A +E+ AG GGT
Sbjct: 138 EHMQRTETDPDLKAMAVSELKEVRARAPEVEQLLLSAMVPHDDADDGSAIVEIRAGTGGT 197

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHD----GEEAGIKSATLLIKGPNAYGWLKGE 184
           E+  +A  L ++Y   A +R ++ + +        G + G+K  T  + G +A+G LK E
Sbjct: 198 EAAIFAKDLYKLYQHLAVRRGWRVQEMTTSYTEGVGSDDGLKEVTFSVNGQDAFGSLKFE 257

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   ++  R HTS +++ V P   + + + I E D ++DTYR+ GAGGQHVN
Sbjct: 258 SGVHRVQRVPITEAAGRIHTSTATVAVLPQASE-VTVSIHERDIKMDTYRSGGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE---EIANIGES 301
           TTDSAVR+THIPTG+VV  Q ERSQH+N+  A  M+RA++Y+ E +K +           
Sbjct: 317 TTDSAVRLTHIPTGIVVAVQSERSQHRNRDVAMKMIRARVYQQEREKAQLERAEQRRALI 376

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
             T      +IR+Y   P   V D R N+ + S S VL+ D LD  + + 
Sbjct: 377 GGTPGSRSDRIRTYNF-PQDRVTDHRVNV-RASLSSVLEDDGLDGIISSL 424


>gi|150865313|ref|XP_001384475.2| hypothetical protein PICST_58482 [Scheffersomyces stipitis CBS
           6054]
 gi|149386569|gb|ABN66446.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 376

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 21/346 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   Q    +  K        +    + L  +  +L   +   ++    L     L  + 
Sbjct: 14  EVMKQEFDLVEEKMSSGDF--D----QELSIKFSNLSVILENYEKYTSDLSTFEELKSII 67

Query: 77  LEED-DCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +E + D   L+E        +  ++  +   Q   L   +     A LE+  G GG+E+ 
Sbjct: 68  VEPNQDPEFLEEAISEANVTIPHLEKSISTLQSRLLPPMKFSDKPAILEMRPGVGGSEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L++MY  +A   ++K   +   +G    +    + I  P +Y  L+ E GVHR+ 
Sbjct: 128 LFAGDLMQMYINFANHMRWKYTIVSKSEGNGGFVNEVIMSIDTPGSYNVLRHESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVN 244
           RI   +S  R HTS ++I V P + D         E + +  + RIDT RA G GGQHVN
Sbjct: 188 RIPSTESKGRIHTSTAAIVVLPKMSDGNESSLKEDERQFAPGEVRIDTMRAGGKGGQHVN 247

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSK 303
           TTDSAVR+ HIPTGV V  Q ERSQ KNKA+A+++LRA+L  LE  K   E   +     
Sbjct: 248 TTDSAVRLVHIPTGVTVMQQDERSQPKNKAKAFSILRARLAALERDKEFAEQRKMRTDQV 307

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           T      +IR+Y   P   V D R        +  + G+ L D ++
Sbjct: 308 TTTDRSDKIRTYNY-PQNRVTDHRCGFSLHDLTGCMAGNRLMDIIE 352


>gi|254577375|ref|XP_002494674.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
 gi|238937563|emb|CAR25741.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
          Length = 393

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 105/322 (32%), Positives = 152/322 (47%), Gaps = 16/322 (4%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK---LEVE 100
              +    + +  S  +E Q+ L +   L E+     D S+  +             +V 
Sbjct: 63  ETQKTYSRVSSIRSMYEEYQELLDNLKGLQEMIQ--TDPSLKDDAKSEFDNSLPQFRQVS 120

Query: 101 YKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                 LL           LE+  G GGTE+  +   LL MY  +A+   +K   +  ++
Sbjct: 121 NNLLRKLLPPHPFAEKACILELRPGVGGTEAMIFTQDLLNMYIGYAQYHHWKYHVIAQNE 180

Query: 160 GEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            +   G+  A L I  P AY  LK E GVHR+ RI   ++  R HTS +++ V P + +S
Sbjct: 181 NQSGNGLVDAILSIDEPGAYDKLKYESGVHRVQRIPATETKGRTHTSTAAVIVLPQIVES 240

Query: 219 I------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           +      E      + RID  RA G GGQHVNTTDSAVRITH P+G+VV  Q ERSQHKN
Sbjct: 241 VKDAEQSERSFRPDEIRIDVMRAGGKGGQHVNTTDSAVRITHFPSGIVVAMQDERSQHKN 300

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           KA+A+ +LRA+L E E +++E         + T      +IR+Y   P   + D R N  
Sbjct: 301 KAKAFAVLRARLAERERKEKENSERAARKDQVTTTDRSDKIRTYNY-PQNRITDHRCNFT 359

Query: 332 KTSPSDVLDG-DLDDFMKATLA 352
                 V  G  LD+ + +  A
Sbjct: 360 LYDIEGVTSGVKLDEVIDSMAA 381


>gi|78042486|ref|NP_001030185.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
 gi|118573310|sp|Q3MHI7|RF1M_BOVIN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|75773697|gb|AAI05225.1| Mitochondrial translational release factor 1 [Bos taurus]
 gi|296481791|gb|DAA23906.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
          Length = 447

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 108/326 (33%), Positives = 162/326 (49%), Gaps = 21/326 (6%)

Query: 43  KMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
           + L R    L         I+E +  + +   + +   ++D+  + +   +  Q I  ++
Sbjct: 106 RSLTRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTIAQKI 165

Query: 100 EYK---QFESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                  F+SLL  E  D ND  LEV +G   GG   Q +   +  MY  ++  + ++ E
Sbjct: 166 NMLYSELFQSLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWRFE 225

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIW 210
            L     +  G+  A   I G N Y  LK E G+HR+ RI     +SR    HT   S+ 
Sbjct: 226 LLNYTPADYGGLHHAAARISGDNVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 285

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P   D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ 
Sbjct: 286 VLPHP-DEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQI 344

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLR 327
           KNK  A  +LRA+LY  +    ++      + K ++G      +IR+Y       V D R
Sbjct: 345 KNKEIALRVLRARLY--QQIIEKDKCQQRSARKLQVGTRAQSERIRTYNF-TQDRVTDHR 401

Query: 328 TNIEKTSPSDVLDGD--LDDFMKATL 351
              E  +  + L G+  LD  ++  L
Sbjct: 402 IAYEVRNIKEFLCGEKCLDQLIQRLL 427


>gi|50309221|ref|XP_454617.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1172907|sp|P41767|RF1M_KLULA RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|641909|gb|AAB18362.1| peptide termination factor [Kluyveromyces lactis]
 gi|49643752|emb|CAG99704.1| KLLA0E14807p [Kluyveromyces lactis]
          Length = 396

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 163/347 (46%), Gaps = 22/347 (6%)

Query: 20  VQRLSFLNTKTEDP-HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           V  L  L            ++ +     +    L   +    + ++ +     L E+   
Sbjct: 44  VNELRELEDLLSQGGSF--DLEK----QKNFAKLSTIVDSYSKYREEVNQYKELQEIL-- 95

Query: 79  EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D S+ +E   ++  +  ++    +    + L         + LE+  G GG+E+  + 
Sbjct: 96  ELDPSLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSILELRPGVGGSEAMIFT 155

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             LL MY  +A   K+K   +   +     G+  A L I  P +Y  LK E GVHR+ R+
Sbjct: 156 QDLLNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRV 215

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIE-----ISESDCRIDTYRASGAGGQHVNTTDS 248
              +S  R HTS +++ V P + +  E +         + RID  RASG GGQHVNTTDS
Sbjct: 216 PATESKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTDS 275

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIG 307
           AVR+TH P+G+V+  Q+ERSQH+NKA+A+ +LRA+L  +  L+K E+  N  +   +   
Sbjct: 276 AVRLTHYPSGIVISMQEERSQHRNKAKAFAILRARLAEKERLEKEEKERNARKDQVSTTD 335

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAI 353
              +IR+Y   P   + D R          V+ G+ LDD + A  A 
Sbjct: 336 RSDKIRTYNY-PQNRITDHRCGFTLYDIEGVMKGERLDDVIDAMDAF 381


>gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
 gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
          Length = 242

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 96/226 (42%), Positives = 141/226 (62%), Gaps = 2/226 (0%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML RMY RWAE++      ++   GEEAG+KS  L + G   YG+L+ E+G HRL
Sbjct: 1   MDWAEMLERMYLRWAEQQGHGVRLVDRAPGEEAGVKSVELEVAGRYVYGYLRAEKGTHRL 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           VR SP+++   R TSF+ + V PV    D  +++++E D    T R+ G GGQ+VN  ++
Sbjct: 61  VRNSPFNAKGLRQTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVET 120

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
            VRI H+PTG+ V+C QERSQ +N+  A ++L+++L  +  ++             +  W
Sbjct: 121 GVRIVHLPTGISVKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVKAEW 180

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G+QIR+YV  PY++VKD RT +E +  + VLDGDL DFM A L +K
Sbjct: 181 GQQIRNYVFHPYKLVKDTRTGVETSDVAAVLDGDLADFMAAYLRMK 226


>gi|28950278|emb|CAD71246.1| related to translation releasing factor RF-1, mitochondrial
           [Neurospora crassa]
          Length = 430

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 167/374 (44%), Gaps = 45/374 (12%)

Query: 13  LFDWDNAVQ-RLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           L D    +      L  + E   +P        A  + +    L      + + +  L +
Sbjct: 37  LLDRARKLAAEHKQLTKQLESEYEPTA---AKRAGEISKVVAALQE----LDKAKAALDE 89

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124
              LLE     DD  + Q  +D+L   K  +E                      +E+H G
Sbjct: 90  LNGLLE----SDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPG 145

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPN 176
            GGTE + +A+ L RMY R+ E + +    +   + E        E  I  A L +  P 
Sbjct: 146 PGGTEGRHFADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPG 205

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI------------EIEIS 224
           A+   +GE G+HR+ RI   +   R HTS  ++WV P   ++             +  + 
Sbjct: 206 AFAAFRGEAGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVD 265

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            ++ + +  RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++
Sbjct: 266 PTEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRI 325

Query: 285 YELELQKREEIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             L  ++RE  A        S++++  G +IR+Y  Q      D R+ ++  +  +VL G
Sbjct: 326 ASLRREQREAQAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 384

Query: 342 D--LDDFMKATLAI 353
              LD  + +  + 
Sbjct: 385 GEVLDKVINSVQSW 398


>gi|73989054|ref|XP_848713.1| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 2 [Canis familiaris]
          Length = 444

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 106/318 (33%), Positives = 159/318 (50%), Gaps = 18/318 (5%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK---QF 104
           E   L      I+E +  + +   + +   ++D+  + +   +  Q I  ++       F
Sbjct: 111 ELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKINVLYSELF 170

Query: 105 ESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           +SL+  E  D ND  +EV +G   GG   Q +   +  MY  ++  + +K E L     +
Sbjct: 171 QSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPAD 230

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDS 218
             G+  A   I G N Y  LK E GVHR+ RI     ++R    HT   S+ V P   D 
Sbjct: 231 YGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQP-DE 289

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  
Sbjct: 290 VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALR 349

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +LRA+LY  +    ++      + K ++G      +IR+Y       V D R   E    
Sbjct: 350 VLRARLY--QQIIEKDKCQQQSTRKLQVGTRAQSERIRTYNF-TQDRVTDHRIAYEVRGI 406

Query: 336 SDVLDGD--LDDFMKATL 351
            + L G+  LD  ++  L
Sbjct: 407 KEFLCGEKCLDQLIQRLL 424


>gi|149730260|ref|XP_001492759.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Equus caballus]
          Length = 446

 Score =  219 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 111/360 (30%), Positives = 174/360 (48%), Gaps = 23/360 (6%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
             L      +   +    L+   +   +  N  + + L R    L    +  +EIQ    
Sbjct: 74  KALRKYM--EELNKEYRTLDQCLQR--VSANEGDRRSLNRRHAELAPLAAIYREIQEAEQ 129

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLE 120
            + +   + +   ++D+  + +   +  Q +  ++       F+SL+  E  D ND  LE
Sbjct: 130 AIEELESMCKSLNKQDEKQLQELALEERQTVAQKLNALYRELFQSLVPKEKYDKNDVILE 189

Query: 121 VHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           V +G   GG   Q +   +  MY  ++  +++K E L     +  G+  A   I G + Y
Sbjct: 190 VTSGRTTGGDICQQFTREIFDMYQNYSSYKRWKFELLNYTPADYGGLHHAAARISGDSVY 249

Query: 179 GWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             LK E G+HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA
Sbjct: 250 KHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPKDLRIDTFRA 308

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKRE 293
            GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ KNK  A  +LRA+LY+  +E  KR+
Sbjct: 309 KGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKRQ 368

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           + +       T      +IR+Y       V D R   E  +  + L G+  LD  ++  L
Sbjct: 369 QQSARKLQVGTRAQ-SERIRTYNF-TQDRVTDHRIAYEVRNIKEFLHGEKCLDHLIQRLL 426


>gi|213861334|ref|ZP_03385804.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 197

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 120/197 (60%), Positives = 144/197 (73%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MTQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTG 258
           HVN T+SAVRITHIPTG
Sbjct: 181 HVNRTESAVRITHIPTG 197


>gi|323172435|gb|EFZ58072.1| peptide chain release factor 1 [Escherichia coli LT-68]
          Length = 227

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+   +S 
Sbjct: 1   MYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+
Sbjct: 61  GRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQ 318
           VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++       +    G    + R+Y   
Sbjct: 121 VVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNF- 179

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           P   V D R N+      +V++G LD  ++  +
Sbjct: 180 PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 212


>gi|224048051|ref|XP_002187712.1| PREDICTED: mitochondrial translational release factor 1-like
           [Taeniopygia guttata]
          Length = 421

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 101/278 (36%), Positives = 150/278 (53%), Gaps = 13/278 (4%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           ++    +     +   + E+   +       + S E D +D  +EV AG GG E+  + +
Sbjct: 124 ENEDFRKLAEREIASCEEEIAELKQQIVLLLIPSEETDESDLVMEVTAGVGGQEAMLFTS 183

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            +  MY R+A  +K+K E LE    E  G++ A   I G  AY ++K E GVHR+ R+  
Sbjct: 184 EIFDMYQRYAAYKKWKFEVLEYFPSELGGLRHAVASIAGLEAYKYMKFEGGVHRVQRVPK 243

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +   R HTS  ++ + P   + + ++I+  D RI+T RASGAGGQHVNTTDSAVRI HI
Sbjct: 244 TEKQGRIHTSTMTVAILPQPTE-MRLQINPKDLRIETKRASGAGGQHVNTTDSAVRIVHI 302

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQI 312
           PTG+V +CQQERSQ +NK +A  ML AKLY  +L   EE      + K +I   G   +I
Sbjct: 303 PTGIVSECQQERSQIRNKEKAMQMLCAKLYNAKL--EEETKKRNYARKIQIGTKGRSEKI 360

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMK 348
           R+Y   P   + D R +         + G+  LD+ ++
Sbjct: 361 RTYNF-PQDRITDHRISRSVHHVESFMLGEEMLDEMIQ 397


>gi|213162329|ref|ZP_03348039.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 194

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 129/193 (66%), Positives = 154/193 (79%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G 
Sbjct: 2   DCYLDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRA
Sbjct: 62  YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRA 121

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+   
Sbjct: 122 SGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 181

Query: 296 ANIGESSKTEIGW 308
               E +K++IGW
Sbjct: 182 KQAMEDTKSDIGW 194


>gi|6321295|ref|NP_011372.1| Mrf1p [Saccharomyces cerevisiae S288c]
 gi|400276|sp|P30775|RF1M_YEAST RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|3972|emb|CAA42932.1| mitochondrial release factor 1 [Saccharomyces cerevisiae]
 gi|1322722|emb|CAA96855.1| MRF1 [Saccharomyces cerevisiae]
 gi|1498241|emb|CAA68219.1| MRF1 [Saccharomyces cerevisiae]
 gi|151943668|gb|EDN61978.1| mitochondrial translation release factor [Saccharomyces cerevisiae
           YJM789]
 gi|190407089|gb|EDV10356.1| mitochondrial polypeptide chain release factor [Saccharomyces
           cerevisiae RM11-1a]
 gi|207345440|gb|EDZ72262.1| YGL143Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272236|gb|EEU07227.1| Mrf1p [Saccharomyces cerevisiae JAY291]
 gi|259146366|emb|CAY79623.1| Mrf1p [Saccharomyces cerevisiae EC1118]
 gi|285812067|tpg|DAA07967.1| TPA: Mrf1p [Saccharomyces cerevisiae S288c]
 gi|323304985|gb|EGA58739.1| Mrf1p [Saccharomyces cerevisiae FostersB]
          Length = 413

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 105/315 (33%), Positives = 153/315 (48%), Gaps = 17/315 (5%)

Query: 49  RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQF 104
              L        E +++L +   L E+ +   D S+  E       +  + E        
Sbjct: 85  YAKLSALTDTFIEYKEKLNELKSLQEMIV--SDPSLRAEAEQEYAELVPQYETTSSRLVN 142

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA- 163
           + L         + LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E   
Sbjct: 143 KLLPPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGS 202

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GI  A L I+   +Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D     I
Sbjct: 203 GIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSI 262

Query: 224 S-------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
                     + R+D  RASG GGQHVNTTDSAVR+THIP+G+VV  Q ERSQHKNKA+A
Sbjct: 263 DAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKA 322

Query: 277 WNMLRAKLYELELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           + +LRA+L E E  ++EE       S+        +IR+Y   P   + D R        
Sbjct: 323 FTILRARLAEKERLEKEEKERKARKSQVSSTNRSDKIRTYNF-PQNRITDHRCGFTLLDL 381

Query: 336 SDVLDGD-LDDFMKA 349
             VL G+ LD+ ++A
Sbjct: 382 PGVLSGERLDEVIEA 396


>gi|115403013|ref|XP_001217583.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189429|gb|EAU31129.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 447

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/363 (28%), Positives = 161/363 (44%), Gaps = 34/363 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +       L+ K ED     +   AK +  E   +   +       + + +   +LE   
Sbjct: 49  SLAAEHKSLSAKLED-SF--DAKTAKRIG-ELAAITKVLKEWDTANESIAELKSMLEDP- 103

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            + D  +     ++L+  K  +    +  +   +           LE+  GAGG E+  +
Sbjct: 104 -DTDGELRSLAVEDLESSKNNLPVLSDSLKQALVPRHPFAELPCLLEIRPGAGGDEAGLF 162

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRL 190
           A  LLRMYT +  +R F++  +++   + AG   +  A L ++   AY  L+ E GVHR+
Sbjct: 163 AFELLRMYTAFCSRRGFRSSVIKLDVADGAGDDRLTEAILEVEANGAYDVLRTESGVHRV 222

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS--------------IEIEISESDCRIDTYRAS 236
            R+   +S  R HTS  S+ V P   DS               +  +   + R +  RA 
Sbjct: 223 QRVPATESKGRTHTSAVSVMVLPSFPDSGAGSDSALNVDDPNSDYYVDPQEVRSEKMRAG 282

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI- 295
           GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH N+ +AW +LRA+L E   + RE+  
Sbjct: 283 GAGGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQEL 342

Query: 296 ---ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKAT 350
                        +G G +IR+Y         D R+     +   VLDG   L+  M + 
Sbjct: 343 VELRRGVMGGVARMGRGDKIRTYNYG-QSRCTDHRSGTTIHNLDSVLDGGDGLETVMDSV 401

Query: 351 LAI 353
              
Sbjct: 402 RTW 404


>gi|289615662|emb|CBI57583.1| unnamed protein product [Sordaria macrospora]
          Length = 436

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 50/362 (13%)

Query: 40  IEAKMLMRERQHL-------------------DNAISFIKEIQDRLCDNLILLELALEED 80
             A+ L  E Q L                      ++ ++E+         L  L    D
Sbjct: 45  ERARKLAAEHQQLTKQLESDYEPAAAKRAGEISKVVAALQELDKAKAALDELHGLLK-SD 103

Query: 81  DCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSND--AYLEVHAGAGGTESQDWANM 136
           D  + Q  +D+L   K  +E       + L+ +    D    +E+H G GGTE + +A+ 
Sbjct: 104 DAELRQLANDDLDATKKHLETLGTNLSATLTPKHPFADMPCLIELHPGPGGTEGRHFADT 163

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQGVH 188
           L RMY ++ E + +    L   + E        E  I  A L +  P A+   +GE G+H
Sbjct: 164 LFRMYQKYCENKGYTARVLSYQEAEDRTPGLDGEVPISEAVLEVTDPGAFAAFRGEAGMH 223

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSI------------EIEISESDCRIDTYRAS 236
           R+ RI   +   R HTS  ++WV P   ++             +  I  ++ + +  RAS
Sbjct: 224 RVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYIDPTEVKSEKMRAS 283

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++  L  ++R+  A
Sbjct: 284 GAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQSQNREKAWRLLRSRIASLRREQRDAQA 343

Query: 297 NIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
                   S+ ++  G +IR+Y  Q      D R+ ++  +  +VL G   LD  + +  
Sbjct: 344 KDLRDSVLSQAQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQGGEILDKVINSVQ 402

Query: 352 AI 353
           + 
Sbjct: 403 SW 404


>gi|322699423|gb|EFY91185.1| putative translation releasing factor RF-1 [Metarhizium acridum
           CQMa 102]
          Length = 800

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/343 (27%), Positives = 154/343 (44%), Gaps = 36/343 (10%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  +A    R    L    + +   Q  L     L  +A +E D  +     D LQ  + 
Sbjct: 439 DSQKA----RRAGELHRVAAALSAWQQSLSSIRDLQAMADDEQDPDLAAIARDELQAEEA 494

Query: 98  EVEYKQ--FESLLSG--EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++   +    + L+           +E   G GG E + + + L +MY     +R ++  
Sbjct: 495 KLGSLEKNLSASLTPRHPFADMPCMIEFRPGPGGLEGRYFTDSLFKMYKALCTRRGYRAN 554

Query: 154 ALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
            L+    + AG          ++ A L I+   AY   + E G+HR+ RI   +S  R H
Sbjct: 555 VLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDMFRSEAGMHRVQRIPSTESKGRVH 614

Query: 204 TSFSSIWVYPVVDDSI------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           TS  ++WV P   +S             +  ++  + +++T RA GAGGQHVN T+SA+R
Sbjct: 615 TSAVAVWVLPSFPESSSGGEADADDPESDFYVNPQEVKVETMRARGAGGQHVNKTESAIR 674

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGW 308
           +TH+PTG  V  Q  RSQ +N+  AW +LR+++     + R   A    +S   +T+I  
Sbjct: 675 MTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIASQRAELRMHEAARLRNSVLAQTQITR 734

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
           G +IR+Y         D R  ++  +  DVLDG   LD  M A
Sbjct: 735 GDKIRTYNYN-QDRCTDHRAGLDVHNLPDVLDGGETLDRVMDA 776


>gi|94984716|ref|YP_604080.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
 gi|119361533|sp|Q1J0S3|RF1_DEIGD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94554997|gb|ABF44911.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
          Length = 370

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 161/347 (46%), Gaps = 9/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +        +     DP +  +  E   L R  + L   ++  +E      D     EL
Sbjct: 6   LEELAAEFGLVERALGDPAMLADPREYARLTRRHRELTPIVTLYREHAVLSSDLEGAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + Q   ++L     ++E   +   L +   D+ +  LE+ AGAGG E+  +A
Sbjct: 66  LADPDMRELAQGEIESLSARLAQIEAELEVLLLPTDPDDAKNVILELRAGAGGAEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE    K   L+  + +  G       + G  A+   K E+GVHR+ R+ 
Sbjct: 126 VDLLRMYTRYAEGAGLKLNVLDASESDLGGASKVVAEVTGEFAFRAFKWERGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   +  E+ +  S+ RID +R+ GAGGQ VNTTDSAVR  +
Sbjct: 186 ATESQGRIHTSTVTVAVLPEA-EQGEVSVDPSEVRIDVFRSQGAGGQGVNTTDSAVRAVY 244

Query: 255 ---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
               P  +VV CQ  RSQ KN+ +A  +L ++L E E   REE      +++   G    
Sbjct: 245 RPGTPDEIVVVCQDSRSQIKNREKALVVLASRLAERERAAREERERETRAAQVGTGERSE 304

Query: 311 QIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R   + +  +   V+ G L   + A    ++
Sbjct: 305 KIRTYNY-PQNRVTDHRLEGDAKNFALDSVMAGGLAPIVAALSRDER 350


>gi|327262069|ref|XP_003215848.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Anolis carolinensis]
          Length = 394

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 100/293 (34%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLE 120
           +  +      LA E+++  + +     +   + E+   + + +L    S E D +D  +E
Sbjct: 82  KEEELGDTERLAREDENEDLRKLAETEIVFCQEEIAELKRQIMLHLIPSEETDESDLIME 141

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V +G GG E+  +   +  MY ++A  + +  + LE    +  G++ A+  I G  AY  
Sbjct: 142 VTSGVGGQEAMLFTAEMFDMYQQYAAYKNWNFDILEYAPSDIGGLRYASAAIAGHEAYRQ 201

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHR+ R+   +   R HTS  ++ + P  ++ I + I+  + RI+T RASGAGG
Sbjct: 202 MKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPNE-INLTINPKELRIETKRASGAGG 260

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRI HIPTGVV +CQQERSQ KNKA+A  +LRAKLY ++L+          
Sbjct: 261 QHVNTTDSAVRILHIPTGVVSECQQERSQIKNKAKAIQILRAKLYNMKLEDESRKRETAR 320

Query: 301 -SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
                  G   +IR+Y   P   V D R +         + G+  LD+ ++A 
Sbjct: 321 KIQTGTKGRSEKIRTYNF-PQDRVTDHRISRSVHHIEQFMLGEELLDEMIQAL 372


>gi|299739044|ref|XP_001835016.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
 gi|298403596|gb|EAU86782.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
          Length = 345

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/323 (33%), Positives = 168/323 (52%), Gaps = 16/323 (4%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +V   K + +E + L  A    KE +  L +   LL     + D S+    S+    + 
Sbjct: 12  DDVSRLKQV-KESEPLQEAWDQWKETRKLLDETNALL----SDPDPSMRAMASEESTALN 66

Query: 97  LEVEYKQFES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             ++     +     L         A LE+ +G GG+ES  +A  LLRMY R A +R +K
Sbjct: 67  STLQTLVESTFPSLLLPPSPTAQLSALLELKSGVGGSESSLFAGDLLRMYQRLAVQRGWK 126

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    +D ++ G+K   + IKG  AY  L+ E GVHR+ R+   +S  R HTS  ++ V
Sbjct: 127 AEIAAKNDTDDGGVKDVIMEIKGVGAYDALRWESGVHRVQRVPATESKGRVHTSAVAVLV 186

Query: 212 YPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            P+V+++    E      D +I+  RA GAGGQHVN T+SAVR+THIP+G+ V  Q ERS
Sbjct: 187 LPLVEENDTHGEDLFKMEDVKIEVMRARGAGGQHVNRTESAVRLTHIPSGITVSMQDERS 246

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLR 327
           QH+N+ +A+ +LR++L + ++ +          +         +IR+Y   P + V D R
Sbjct: 247 QHQNRRRAFQVLRSRLLDQKIHREMAERRATRRNLVSGSDRSDKIRTYNF-PQERVTDHR 305

Query: 328 TNIEKTSPSDVLDGD-LDDFMKA 349
             +  T+ S VL+G+ L+DF+ A
Sbjct: 306 IGLTLTNLSSVLEGEGLEDFIDA 328


>gi|270007320|gb|EFA03768.1| hypothetical protein TcasGA2_TC013879 [Tribolium castaneum]
          Length = 387

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 106/301 (35%), Positives = 157/301 (52%), Gaps = 14/301 (4%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFES 106
            L   I+ + E +D + +   L EL  E+DD  I +   +     +  +    E      
Sbjct: 66  QLQPLINALNERKDAVENIQNLSELLNEKDD-DIRKLAEEEKLTFESRIKSIDEKLLEAI 124

Query: 107 LLSGEADSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           L S + D  ++  LEV+AG GG E+  +AN L  MY  +AE + ++T+  +    +  GI
Sbjct: 125 LPSDKEDECNSIVLEVNAGVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGI 184

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           + A+ LI GP  + + K E GVHR+ RI   +   R HTS  S+   P   + IE+ I  
Sbjct: 185 RHASALINGPQVFQFFKHEAGVHRVQRIPTTEKAGRIHTSTVSVVALPQPTE-IEVNIDN 243

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +I+T RASGAGGQHVNTT+SAVR+TH+PTG  V+CQ +RSQ KN+  A   LRA +Y
Sbjct: 244 KDLKIETKRASGAGGQHVNTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIY 303

Query: 286 ELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           + +L   E+IA      K ++       +IR+Y   P   + D R       +    L G
Sbjct: 304 QRDL--EEQIARNENMRKNQVRSNFRNEKIRTYNF-PQDRITDHRLQGCNVHNLKGFLQG 360

Query: 342 D 342
           +
Sbjct: 361 N 361


>gi|301760227|ref|XP_002915915.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281349098|gb|EFB24682.1| hypothetical protein PANDA_003948 [Ailuropoda melanoleuca]
          Length = 445

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 159/318 (50%), Gaps = 18/318 (5%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK---QF 104
           E   L      I+E +  + +   + +   ++D+  + +   +  Q I  ++       F
Sbjct: 112 ELAPLAAIYQEIQEAEQAIEELDSMCKSLNKQDEKQLQELALEERQTIAQKINMLYSELF 171

Query: 105 ESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
           +SL+  E  D ND  LEV AG   GG   Q +   +  MY  ++  + +K E L     +
Sbjct: 172 QSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPAD 231

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDS 218
             G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ V P   D 
Sbjct: 232 YGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DE 290

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  
Sbjct: 291 VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALR 350

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +LRA+LY  +    ++      + K ++G      +IR+Y       V D R   E    
Sbjct: 351 VLRARLY--QQIIEKDKCQQQSTRKLQVGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDI 407

Query: 336 SDVLDGD--LDDFMKATL 351
            + L G+  LD  ++  L
Sbjct: 408 KEFLCGEKCLDQLIQTLL 425


>gi|157134367|ref|XP_001663262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870516|gb|EAT34741.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 173/318 (54%), Gaps = 10/318 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQ 103
           ++    L + +   ++ +  + +   L E++ E  ED   +++E  +    I  +++ + 
Sbjct: 92  IKRMALLSHVVEMYEQRRIIMDNLNSLQEMSAEKDEDMLQLMREEKEAYTNILRKLDGEI 151

Query: 104 FESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
              +LS   E D N   LEV AG GG E+  ++  L  MY  + + + ++TE +E  D E
Sbjct: 152 MNGILSMDDEEDYNTLILEVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETEDTE 211

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             GI+ A++++ G +AY +LK E GVHR+ R+   + ++R HTS +++ V P   D  EI
Sbjct: 212 LGGIRHASIVVHGRDAYRYLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRP-DEFEI 270

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ + D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A   L 
Sbjct: 271 ELKDKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQKLL 330

Query: 282 AKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVL 339
           AKL + EL+ +     ++ +S         +IR+Y       + D R       +    L
Sbjct: 331 AKLTQQELESKFNATQSMKKSQVGSSLRNEKIRTYNYN-QDRITDHRVDGGTTHNLKAFL 389

Query: 340 DG--DLDDFMKATLAIKK 355
           +G   L+D +    A+ +
Sbjct: 390 EGGSQLEDMIAKLQAMHR 407


>gi|91081965|ref|XP_967739.1| PREDICTED: similar to AGAP012082-PA, partial [Tribolium castaneum]
          Length = 383

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 107/300 (35%), Positives = 160/300 (53%), Gaps = 12/300 (4%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFES-L 107
            L   I+ + E +D + +   L EL  E+DD    + +E     +     ++ K  E+ L
Sbjct: 66  QLQPLINALNERKDAVENIQNLSELLNEKDDDIRKLAEEEKLTFESRIKSIDEKLLEAIL 125

Query: 108 LSGEADSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
            S + D  ++  LEV+AG GG E+  +AN L  MY  +AE + ++T+  +    +  GI+
Sbjct: 126 PSDKEDECNSIVLEVNAGVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIR 185

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+ LI GP  + + K E GVHR+ RI   +   R HTS  S+   P   + IE+ I   
Sbjct: 186 HASALINGPQVFQFFKHEAGVHRVQRIPTTEKAGRIHTSTVSVVALPQPTE-IEVNIDNK 244

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I+T RASGAGGQHVNTT+SAVR+TH+PTG  V+CQ +RSQ KN+  A   LRA +Y+
Sbjct: 245 DLKIETKRASGAGGQHVNTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQ 304

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD 342
            +L   E+IA      K ++       +IR+Y   P   + D R       +    L G+
Sbjct: 305 RDL--EEQIARNENMRKNQVRSNFRNEKIRTYNF-PQDRITDHRLQGCNVHNLKGFLQGN 361


>gi|164424709|ref|XP_960901.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
 gi|157070629|gb|EAA31665.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
          Length = 415

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 167/374 (44%), Gaps = 45/374 (12%)

Query: 13  LFDWDNAVQ-RLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           L D    +      L  + E   +P        A  + +    L      + + +  L +
Sbjct: 22  LLDRARKLAAEHKQLTKQLESEYEPTA---AKRAGEISKVVAALQE----LDKAKAALDE 74

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124
              LLE     DD  + Q  +D+L   K  +E                      +E+H G
Sbjct: 75  LNGLLE----SDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPG 130

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPN 176
            GGTE + +A+ L RMY R+ E + +    +   + E        E  I  A L +  P 
Sbjct: 131 PGGTEGRHFADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPG 190

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI------------EIEIS 224
           A+   +GE G+HR+ RI   +   R HTS  ++WV P   ++             +  + 
Sbjct: 191 AFAAFRGEAGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVD 250

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            ++ + +  RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++
Sbjct: 251 PTEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRI 310

Query: 285 YELELQKREEIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             L  ++RE  A        S++++  G +IR+Y  Q      D R+ ++  +  +VL G
Sbjct: 311 ASLRREQREAQAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 369

Query: 342 D--LDDFMKATLAI 353
              LD  + +  + 
Sbjct: 370 GEVLDKVINSVQSW 383


>gi|157133587|ref|XP_001656262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870765|gb|EAT34990.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 107/318 (33%), Positives = 173/318 (54%), Gaps = 10/318 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQ 103
           ++    L + +   ++ +  + +   L E++ E  ED   +++E  +    I  +++ + 
Sbjct: 92  IKRMALLSHVVEMYEQRRIIMDNLNSLQEMSTEKDEDMLQLMREEKEAYTNILRKLDGEI 151

Query: 104 FESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
              +LS   E D N   LEV AG GG E+  ++  L  MY  + + + ++TE +E  D E
Sbjct: 152 MNGILSMDDEEDYNTLILEVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETEDTE 211

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             GI+ A++++ G +AY +LK E GVHR+ R+   + ++R HTS +++ V P   D  EI
Sbjct: 212 LGGIRHASIVVHGRDAYRYLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRP-DEFEI 270

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ + D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A   L 
Sbjct: 271 ELKDKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQKLL 330

Query: 282 AKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVL 339
           AKL + EL+ +     ++ +S         +IR+Y       + D R       +    L
Sbjct: 331 AKLTQQELESKFNATQSMKKSQVGSSLRNEKIRTYNYN-QDRITDHRVDGGTTHNLKAFL 389

Query: 340 DG--DLDDFMKATLAIKK 355
           +G   L+D +    A+ +
Sbjct: 390 EGGPQLEDMIAKLQAMHR 407


>gi|126337707|ref|XP_001368579.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Monodelphis domestica]
          Length = 447

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 110/352 (31%), Positives = 169/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILL 73
           ++       L+       +  +    + + R    L    +  KEIQ+    + D   + 
Sbjct: 79  EDLTGEYQRLDRLLHHVSV-SDGDR-RTMSRRHAELAQFTAIYKEIQESEKAIEDLESMC 136

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGEADSN-DAYLEVHAG--AGG 127
           +   E+D+  +L+   +  + I  ++       F+SL+  E D   D  LEV +G   GG
Sbjct: 137 KSLNEQDEKQLLELAFEEREVIDQKINRLCQELFQSLVPKEKDDKSDVILEVTSGRTTGG 196

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +  E L     +  G+  A   I G + Y ++K E G+
Sbjct: 197 DICQQFTKEIFEMYQSYSCYKGWNFEILNYTTADYGGLHHAAARISGDSVYEYMKYEGGI 256

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D ++I +   D RIDT+RA GAGGQHVN
Sbjct: 257 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDIRVEPKDLRIDTFRAKGAGGQHVN 315

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRI HIPTG+VV+CQQ+RSQ +NK  A+ +LRAKLY  +    +E +      K 
Sbjct: 316 TTDSAVRIVHIPTGLVVECQQQRSQIQNKDTAFRLLRAKLY--QQTIEKEQSKKQSVRKL 373

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R + E     + L G   LD  ++  L
Sbjct: 374 QVGTRAQSERIRTYNF-TQDRVTDHRISYEARDIKEFLCGGRPLDTLIQRLL 424


>gi|323445681|gb|EGB02173.1| hypothetical protein AURANDRAFT_35500 [Aureococcus anophagefferens]
          Length = 268

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 107/259 (41%), Positives = 154/259 (59%), Gaps = 9/259 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E+ ++G  D  D  LE+ AGAGG ++Q+W  M+ RMY R+ EKR F     E  +G+ 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 163 AGIKS-ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS--- 218
            G     +L I+G NA+G  +GE+G HRLVR SP++S ++R TSF+S+   P + D    
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 219 ---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                 E+  +D  + T RA GAGGQ+VN  ++AVR+TH+PTG+ V+C +ER+Q  NKA 
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRMTHVPTGLRVRCARERTQGANKAI 180

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  MLRAKL     ++R          +    +G  +RSYVL PY++VKD +   E    
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVAADFGASVRSYVLHPYKLVKDDK--HETPHA 238

Query: 336 SDVLDGDLDDFMKATLAIK 354
           +DVLDGDL  F+ A L  +
Sbjct: 239 TDVLDGDLGPFLDAELRRR 257


>gi|156055958|ref|XP_001593903.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980]
 gi|154703115|gb|EDO02854.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 490

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 170/367 (46%), Gaps = 38/367 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N       L+++T +     N   AK +  E Q +  A+   +E ++ L +   LL+ + 
Sbjct: 111 NLAAEHDRLSSETSE-SF--NAKVAKRIG-ELQDVATALKKWEETKESLSELDALLQDS- 165

Query: 78  EEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  + +   ++L      +E                      +E+  GAGG E+  +
Sbjct: 166 -STDEELRELAVEDLTTTTAHLEELSRNLTTSLTPKHPFAELPCLVEIRPGAGGGEAAIF 224

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAG------IKSATLLIKGPNAYGWLKGEQGV 187
           A  LLRMY  +  +++F++  ++    +  G      I    L I+ P +Y  L+GE GV
Sbjct: 225 AADLLRMYRAYCARKRFRSTIIKYETADGEGAGSDSPISEVVLEIETPGSYDSLRGEAGV 284

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDS----------------IEIEISESDCRID 231
           HR+ R+   +   R HTS  S+ V P    +                 +  ++ +D R D
Sbjct: 285 HRVQRVPATEKQGRTHTSAVSVMVLPSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTD 344

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
             RA GAGGQHVNTTDSAVR+TH+PT  VV  Q+ RSQ +N+ +AW +LR++L   + + 
Sbjct: 345 VMRARGAGGQHVNTTDSAVRLTHVPTNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREA 404

Query: 292 REEI---ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDF 346
           REE             ++G G +IR+Y     Q V D R+ +   +  DV++G  +L+  
Sbjct: 405 REEQLINLRRSVIGVAKMGRGDKIRTYNWG-QQRVTDHRSGLSVHNLDDVMEGGDELEKV 463

Query: 347 MKATLAI 353
           + +  A 
Sbjct: 464 IDSVKAW 470


>gi|328466430|gb|EGF37577.1| peptide chain release factor 2 [Lactobacillus rhamnosus MTCC 5462]
          Length = 189

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 99/189 (52%), Positives = 136/189 (71%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  +E D  +  E    L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW 
Sbjct: 1   MLQDEPDPDLQHEEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWG 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML+RMY RWA++  FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRIS
Sbjct: 61  SMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS  RRHTSF+S+ V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H
Sbjct: 121 PFDSAGRRHTSFASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIH 180

Query: 255 IPTGVVVQC 263
           +PTG+V   
Sbjct: 181 LPTGIVTSS 189


>gi|302307223|ref|NP_983812.2| ADL284Cp [Ashbya gossypii ATCC 10895]
 gi|299788896|gb|AAS51636.2| ADL284Cp [Ashbya gossypii ATCC 10895]
          Length = 397

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 22/342 (6%)

Query: 21  QRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             L  L            +V +     ++   L + +   +  QD +     L ++  + 
Sbjct: 44  AELETLEKLLSKGESF--DVEK----QKKYSKLSSIVDTFRAYQDNVHMYRELQDMIAQ- 96

Query: 80  DDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D S+  E    L  +        +    + L           +E+  G GG E+  +  
Sbjct: 97  -DASLRTEAQAELDELAPTLARSADTLLDKLLPPHPFAEKPCIVELRPGVGGIEAMIFTQ 155

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            LL MY  +A+  ++K       +     G+  A L I  P +Y  LK E GVHR+ RI 
Sbjct: 156 DLLNMYIGYAQHHRWKWSVTSATENTTGAGLSEAILSIDEPGSYDRLKFESGVHRVQRIP 215

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIE-----ISESDCRIDTYRASGAGGQHVNTTDSA 249
             +S  R HTS +++ V P + +  E +         + RID  RASG GGQHVNTTDSA
Sbjct: 216 ATESKGRTHTSTAAVVVLPKMAEEAESDAYERTFKPGEIRIDVMRASGKGGQHVNTTDSA 275

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGW 308
           VRITH P+G+ +  Q+ERSQH+NKA+A+ +LRAKL +LE ++RE         +      
Sbjct: 276 VRITHFPSGIAIHMQEERSQHRNKAKAFQILRAKLADLERKEREARERSARKDQVSSTDR 335

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
             +IR+Y   P   V D R  +   + ++V+ G+ LD+ + +
Sbjct: 336 SDKIRTYNF-PQNRVTDHRCAVSLHALAEVVTGERLDELIDS 376


>gi|226356572|ref|YP_002786312.1| peptide chain release factor 1 [Deinococcus deserti VCD115]
 gi|259585218|sp|C1CWJ1|RF1_DEIDV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226318562|gb|ACO46558.1| putative Peptide chain release factor 1 (RF-1) [Deinococcus deserti
           VCD115]
          Length = 366

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 13/349 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                     +     DP    +      L R  + L   ++ ++E +    D     EL
Sbjct: 5   LSELAAEFGMVERALGDPAALADPQAYTRLTRRHRELLPLVTLLREREALESDLRGAQEL 64

Query: 76  ALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + Q E ++   R++      +   L +   D  +  LE+ AGAGG E+  + 
Sbjct: 65  LSDPDMRELAQNEITEATARLEQLGAELEVLLLPTDPDDLKNVILELRAGAGGAEAGLFV 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE R  +   LE  + +  G       I G  A+   K E+GVHR+ R+ 
Sbjct: 125 MDLLRMYTRYAEDRGLRLNVLEASESDLGGASKVVAEISGEFAFRAFKWERGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   +  E+++  S+ RID +R+ GAGGQ VNTTDSAVR  +
Sbjct: 185 ATESQGRIHTSTVTVAVLPEA-EQGEVQLDLSEVRIDVFRSQGAGGQGVNTTDSAVRAVY 243

Query: 255 ---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
               P  ++V CQ  RSQ KN+ +A  +L ++L E E   R+  A        ++G G  
Sbjct: 244 RAGTPDEIMVVCQDGRSQIKNREKALVVLASRLAERERAARD--AQEARDRAAQVGSGER 301

Query: 310 -RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R   + +      V+ G L   + A    ++
Sbjct: 302 SEKIRTYNY-PQNRVTDHRLEGDSKNHPLDSVMAGGLGPVVSALARDER 349


>gi|73946154|ref|XP_541157.2| PREDICTED: similar to mitochondrial translational release factor
           1-like [Canis familiaris]
          Length = 280

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 105/257 (40%), Positives = 143/257 (55%), Gaps = 11/257 (4%)

Query: 101 YKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           Y Q   LL  S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE  
Sbjct: 11  YLQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYF 70

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
             E  G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + 
Sbjct: 71  PSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE- 129

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           I + I+  D RI T RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A  
Sbjct: 130 INLVINPKDLRIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMK 189

Query: 279 MLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
            LRAKLY + L   EE +    + K ++   G   +IR+Y   P   V D R N      
Sbjct: 190 KLRAKLYSMYL--EEETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDL 246

Query: 336 SDVLDGD--LDDFMKAT 350
              + G+  LD+ +++ 
Sbjct: 247 ETFMQGEYLLDELVQSL 263


>gi|121591760|ref|ZP_01678968.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
 gi|121546377|gb|EAX56631.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
          Length = 242

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 5/235 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTT
Sbjct: 188 RVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTT 242


>gi|301346253|ref|ZP_07226994.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301513591|ref|ZP_07238828.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301596660|ref|ZP_07241668.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 201

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 103/201 (51%), Positives = 144/201 (71%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F
Sbjct: 1   MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AG
Sbjct: 61  RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+
Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNT 245
            SD R DTYRASGAGGQH+N 
Sbjct: 181 PSDVRTDTYRASGAGGQHINK 201


>gi|317151025|ref|XP_001824394.2| peptide chain release factor 1 [Aspergillus oryzae RIB40]
          Length = 427

 Score =  215 bits (548), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEV--- 99
            + +    L    + + E          L  L  + D D  +     ++L+ +K  +   
Sbjct: 68  RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTI 127

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            E  +   +      +    LE+  GAGG E+  +A  LLRMYT +  +R F++  +++ 
Sbjct: 128 SENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLE 187

Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
            G+   E  +  A + ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P  
Sbjct: 188 VGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 247

Query: 216 DDS--------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            ++               +  +   + R +  RA GAGGQHVN T+SA+R+TH+PTG+VV
Sbjct: 248 PETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVV 307

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 308 SMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNY 367

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R++I   + +DVLDG   L+  M++  + 
Sbjct: 368 G-QSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSW 404


>gi|167517235|ref|XP_001742958.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778057|gb|EDQ91672.1| predicted protein [Monosiga brevicollis MX1]
          Length = 416

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/362 (29%), Positives = 173/362 (47%), Gaps = 41/362 (11%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL+ L T+   P+      E   + R    +      I      L     L ++   
Sbjct: 33  LSERLTQLTTENGAPN------EIASISRRLAKVAALTEVIHARDKALEAIAELQDMLKT 86

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E+D  + +  + +L + + +++  + E     +    AD   A +E+ AG GG E+  +A
Sbjct: 87  EEDSELRELAASDLAQEQTQLQELEQELLQALVPEDTADEASAVVELRAGTGGREAALFA 146

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MY   A+++++  + L+    ++ G++ A+L I G   +G LK E GVHR+ RI 
Sbjct: 147 HDLKLMYQGLAQQQRWSFKVLDEQATDDGGLREASLSISGSGVFGMLKFESGVHRVQRIP 206

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   D +E+E+ + D  ++TYRA GAGGQHVNTTDSAVR+TH
Sbjct: 207 TTETAGRIHTSTATVAVLPEPTD-VEVEVLDKDIHVETYRAGGAGGQHVNTTDSAVRLTH 265

Query: 255 IPTGVVVQCQQERSQH-------------------------KNKAQAWNMLRAKLYELEL 289
           +PTG VV CQ ERSQH                         +NKA A  +L+A+++    
Sbjct: 266 LPTGTVVACQTERSQHKLEHIVSTRVAIDQCVLFNRVHHLVQNKAAAMKVLKARIFAQVR 325

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDD 345
            K+EE        +          +IR+Y + P   V D R      +   +L G  L +
Sbjct: 326 AKQEEERRAARREQISTTPGERSDRIRTYNM-PQDRVTDHRIKASLNNVETLLKGISLPE 384

Query: 346 FM 347
            +
Sbjct: 385 LI 386


>gi|330919897|ref|XP_003298803.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
 gi|311327840|gb|EFQ93110.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
          Length = 416

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 166/362 (45%), Gaps = 34/362 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                   L  K  +     +   AK L          +S + E          L  +  
Sbjct: 46  AITSEHKELTEKLAN-GF--DTRAAKKLG----EYSPIVSALGEWDKANESVTELTSMIH 98

Query: 78  EED-DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +   D  +    SD+L+  + ++    +      +           LE+  GAGG+E+  
Sbjct: 99  DSTTDPELRSLASDDLEETRTQLVNASQSLITSLVPVHPFAHLPCLLEIRPGAGGSEAAI 158

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHD---GEEAGIK--SATLLIKGPNAYGWLKGEQGV 187
           +A  L RMY+ +  +  F+T  ++  +     EAG+    A + ++  NAYG  + E GV
Sbjct: 159 FAGDLFRMYSAFCNRNGFRTNLIKYENINGTSEAGVPLSEAIMEVENENAYGVFRCEAGV 218

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-----------EIEISESDCRIDTYRAS 236
           HR+ R+   ++  R HTS +S+ V P + ++            +  I   + +++  RAS
Sbjct: 219 HRVQRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYYIDPKEVKLEVMRAS 278

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T+SAVR+THIPT  VV  Q  RSQHKNK +AW +LRA++ +   +KREE  
Sbjct: 279 GAGGQHVNKTESAVRLTHIPTNTVVAMQDSRSQHKNKEKAWALLRARIAQTRREKREEEM 338

Query: 297 NIGESSKT---EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
                S     ++G G ++R+Y     Q V D R+ +      DV+ G   LD  M++  
Sbjct: 339 ANMRRSVIGVAKMGRGDKVRTYNWG-QQRVTDHRSGMTVHDLDDVMGGGQTLDKVMESVR 397

Query: 352 AI 353
           + 
Sbjct: 398 SW 399


>gi|300175228|emb|CBK20539.2| unnamed protein product [Blastocystis hominis]
          Length = 299

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 17/289 (5%)

Query: 81  DCSILQETSDNL-QRIKLEVEYKQFESLLSGEA----------DSNDAYLEVHAGAGGTE 129
              +L E   +L Q  +  +E     SL S +           D  +  +EV AGAGG E
Sbjct: 1   MREMLNEEYTHLLQEEEKVLEEANIISLPSNKYCCITLFTPREDHKNCTIEVRAGAGGAE 60

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   ++ MY  +   + +K   L  +     GIK A + I G  ++G L+ E GVHR
Sbjct: 61  ACLFTEDIMNMYKNYCSLKDWKWSVLSCNAPTGGGIKEAIIKITGEGSFGVLRTESGVHR 120

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P V +++E  I  SD RID +R+SG GGQHVN T+SA
Sbjct: 121 VQRVPETESQGRIHTSTMTVAVLPEV-ENMETLIRPSDLRIDLFRSSGKGGQHVNKTESA 179

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGW 308
           VRITH+PTG+VV  Q ER+QH NKA+A  +L  +L   +     EEI +   S      W
Sbjct: 180 VRITHLPTGIVVSNQDERNQHMNKAKAMQILAIRLQNRQNSLFNEEIDSERRSYPFAFDW 239

Query: 309 G--RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
               + R+Y   P   + D R  +       +++G+ LD+F  A    +
Sbjct: 240 ARCEKNRTYNY-PNSRITDHRIGLTLYGMDKMMNGELLDEFAVALKQWR 287


>gi|83773134|dbj|BAE63261.1| unnamed protein product [Aspergillus oryzae]
          Length = 388

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEV--- 99
            + +    L    + + E          L  L  + D D  +     ++L+ +K  +   
Sbjct: 29  RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTI 88

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            E  +   +      +    LE+  GAGG E+  +A  LLRMYT +  +R F++  +++ 
Sbjct: 89  SENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLE 148

Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
            G+   E  +  A + ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P  
Sbjct: 149 VGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 208

Query: 216 DDS--------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            ++               +  +   + R +  RA GAGGQHVN T+SA+R+TH+PTG+VV
Sbjct: 209 PETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVV 268

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 269 SMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNY 328

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R++I   + +DVLDG   L+  M++  + 
Sbjct: 329 G-QSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSW 365


>gi|114651379|ref|XP_001150035.1| PREDICTED: mitochondrial translational release factor 1 isoform 1
           [Pan troglodytes]
          Length = 455

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 107/335 (31%), Positives = 160/335 (47%), Gaps = 19/335 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +      
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 376

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            T      +IR+Y       V D R   E      
Sbjct: 377 GTRAQ-SERIRTYNF-TQDRVSDHRIAYEVRDIKA 409


>gi|47218188|emb|CAF97052.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 409

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 108/308 (35%), Positives = 159/308 (51%), Gaps = 14/308 (4%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
               L   I  I+E++ +  + +   E  LE++D ++ +      +    +++    + L
Sbjct: 87  RVSLLAPLIRSIRELETKQMEMVET-ETLLEDEDPALRELAETERENCVKDIQDLSKKIL 145

Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
                  EAD N+  LEV AG GG E+  +   +  MY  +A+   +  + LE    +  
Sbjct: 146 DLLIPEEEADLNELVLEVTAGVGGQEAMLFTAEVFDMYQGYAQHHGWSFDTLEYMTSDLG 205

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A+  I G   Y  +K E GVHR+ R+   +   R HTS  ++ V P   + I   I
Sbjct: 206 GLRHASASISGRLCYKKMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAVLPQPTE-ISFTI 264

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           ++ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ +A   LRAK
Sbjct: 265 NQKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVAECQQERSQLKNREKAMKALRAK 324

Query: 284 LYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           LY L+L   EE +      K +I   G   +IR+Y       + D R  +      + L 
Sbjct: 325 LYSLKL--EEETSKRYNQRKIQIGTKGRSEKIRTYNFA-QDRITDHRIGMTLHDIKNFLL 381

Query: 341 GD--LDDF 346
           G+  LD+ 
Sbjct: 382 GEDLLDEM 389


>gi|301613862|ref|XP_002936423.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Xenopus (Silurana) tropicalis]
          Length = 420

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 104/247 (42%), Positives = 143/247 (57%), Gaps = 9/247 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
            GE++ ND  +EV AG GG E+  +   +  MY  +A  + +  + LE    E  G++ A
Sbjct: 154 RGESEDNDLIMEVTAGVGGQEAMLFTAEMFDMYQHYAVHKNWSFDLLEYFSSELGGLRHA 213

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           T+ I G +AY  LK E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D 
Sbjct: 214 TVSIGGQDAYKCLKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPSE-INLVINPKDL 272

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RI+T RASGAGGQHVNTTDSAVRI HIPTGVV +CQQERSQ KNK +A  +LRAKLY ++
Sbjct: 273 RIETKRASGAGGQHVNTTDSAVRIVHIPTGVVSECQQERSQIKNKEKAMQVLRAKLYTMK 332

Query: 289 LQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
           L   EE +    + K +I   G   +IR+Y   P   V D R      +    L G+  L
Sbjct: 333 L--EEETSKRYNARKIQIGTRGRSEKIRTYNY-PQDRVTDHRIGKSLHNIEGFLFGEELL 389

Query: 344 DDFMKAT 350
           DD +++ 
Sbjct: 390 DDLIQSL 396


>gi|193786181|dbj|BAG51464.1| unnamed protein product [Homo sapiens]
          Length = 445

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 168/351 (47%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADNGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +      
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 376

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
            T      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 377 GTRAQ-SERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|194040714|ref|XP_001926694.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Sus scrofa]
 gi|311266318|ref|XP_003131053.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Sus scrofa]
          Length = 446

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/326 (31%), Positives = 159/326 (48%), Gaps = 21/326 (6%)

Query: 43  KMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
           + L R    L         I+E +  + +   + +   ++D+  + +   +  + I  ++
Sbjct: 105 RSLNRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEEKRTIAQKI 164

Query: 100 EYKQFES----LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                E     +   + D ND  LEV +G   GG   Q +   +  MY  ++  + +  E
Sbjct: 165 NMLYHELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWTFE 224

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIW 210
            L     +  G+  A   I G N Y  LK E G+HR+ RI     +SR    HT   S+ 
Sbjct: 225 LLNYTPADYGGLHHAAARISGANVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 284

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P   D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ 
Sbjct: 285 VLPQP-DEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQI 343

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLR 327
           KNK  A  +LRA+LY+  ++K +         K ++G      +IR+Y       V D R
Sbjct: 344 KNKEIALRVLRARLYQQIIEKEKCQQQSA--RKLQVGTRAQSERIRTYNF-TQDRVTDHR 400

Query: 328 TNIEKTSPSDVLDGD--LDDFMKATL 351
              E  +  + L G+  LD  ++  L
Sbjct: 401 IAYEVRNIKEFLCGEKCLDLLIQRLL 426


>gi|194377328|dbj|BAG57612.1| unnamed protein product [Homo sapiens]
          Length = 468

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 107/335 (31%), Positives = 160/335 (47%), Gaps = 19/335 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 93  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 150

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 151 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 210

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 211 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 270

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 271 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGGQHVN 329

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +      
Sbjct: 330 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 389

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            T      +IR+Y       V D R   E      
Sbjct: 390 GTRAQ-SERIRTYNF-TQDRVSDHRIAYEVRDIKA 422


>gi|327267784|ref|XP_003218679.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Anolis carolinensis]
          Length = 443

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 159/326 (48%), Gaps = 21/326 (6%)

Query: 43  KMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETSDN---LQRIK 96
           + L +    L       KEIQ+    + D   L       ++ ++L+   +    + +  
Sbjct: 99  RDLSKRHAELFPLAVSFKEIQEAKKEMQDLEALCAKLNSSEEKALLELAIEEKGVIDQKI 158

Query: 97  LEVEYKQFESLLS-GEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            E+  K F+ L+   + D  D  LEV +G   GG   Q +   +  MY  +A+ + +  E
Sbjct: 159 RELYQKLFQILIPRDKYDECDVLLEVTSGRTTGGDICQQFTKEVFDMYQNYADYKCWTFE 218

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIW 210
             +    E  G+  A   I G + Y  LK E G+HR+ RI     +SR    HT   S+ 
Sbjct: 219 IRKYTPSEYGGLHHAAAYISGDDVYRHLKYEGGIHRVQRIPETGLSSRMQRIHTGTMSVI 278

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P + + I I++   D RIDT+RA GAGGQHVNTTDSAVRI HIPTG+ V+CQQERSQ 
Sbjct: 279 VLPQL-EEINIKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRIVHIPTGITVECQQERSQQ 337

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLR 327
            N+ +A   L+ KLY+  +    E++    + K ++G      +IR+Y       V D R
Sbjct: 338 VNREKAMQALKDKLYQQAI--ERELSQKQSARKMQLGTRSQSERIRTYNFN-QDRVSDHR 394

Query: 328 TNIEKTSPSDVLDGD--LDDFMKATL 351
            + E      +L G   LD+ +   L
Sbjct: 395 ISYEVRDIKGILSGKGVLDELINKLL 420


>gi|291393031|ref|XP_002713016.1| PREDICTED: mitochondrial translational release factor 1
           [Oryctolagus cuniculus]
          Length = 446

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 111/352 (31%), Positives = 171/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILL 73
           ++  +    L+   +   +  +    K L R    L    +  +EI   Q  + +   + 
Sbjct: 81  EDLHKEYQTLDECLQRISV-NDGGR-KSLTRRHAELAPLAAIYQEILEAQQAIEELESMC 138

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +    +D+  +     +  Q I  ++       F++L+  E  D ND  LEV +G   GG
Sbjct: 139 KSLNTQDEKQLQALALEERQTIDEKLNMLYSELFQNLVPKEKYDKNDVILEVISGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     E  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSCYKHWKFELLNYTPAEYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPKDLRIDTFRAKGAGGQHVN 317

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A ++LRA+LY+  ++K +         K 
Sbjct: 318 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIALHVLRARLYQQIIEKDKCQQQSA--RKL 375

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R + E     + L G+  LD  ++  L
Sbjct: 376 QVGTRAQSERIRTYNF-TQDRVTDHRISYEVRDIKEFLCGEKCLDQLIQRLL 426


>gi|34577120|ref|NP_004285.2| peptide chain release factor 1, mitochondrial precursor [Homo
           sapiens]
 gi|114651371|ref|XP_509647.2| PREDICTED: peptide chain release factor 1, mitochondrial isoform 5
           [Pan troglodytes]
 gi|114651373|ref|XP_001150158.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Pan troglodytes]
 gi|114651375|ref|XP_001150218.1| PREDICTED: mitochondrial translational release factor 1 isoform 4
           [Pan troglodytes]
 gi|62512140|sp|O75570|RF1M_HUMAN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|27503783|gb|AAH42196.1| Mitochondrial translational release factor 1 [Homo sapiens]
 gi|55958420|emb|CAI16615.1| mitochondrial translational release factor 1 [Homo sapiens]
 gi|119629053|gb|EAX08648.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629054|gb|EAX08649.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629056|gb|EAX08651.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629058|gb|EAX08653.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
          Length = 445

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 168/351 (47%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +      
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 376

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
            T      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 377 GTRAQ-SERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|109120568|ref|XP_001090893.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Macaca mulatta]
 gi|109120570|ref|XP_001090782.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 445

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 80  ENLNKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SLL  E  D ND  LEV +G   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY  +    ++      + K 
Sbjct: 317 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLY--QQIIEKDKCQQRSARKL 374

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 375 QVGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|270132345|ref|NP_666072.3| peptide chain release factor 1, mitochondrial precursor [Mus
           musculus]
 gi|27151667|sp|Q8K126|RF1M_MOUSE RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|20810364|gb|AAH28898.1| Mitochondrial translational release factor 1 [Mus musculus]
 gi|26336078|dbj|BAC31724.1| unnamed protein product [Mus musculus]
 gi|148703819|gb|EDL35766.1| mitochondrial translational release factor 1, isoform CRA_a [Mus
           musculus]
          Length = 446

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 169/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILL 73
           ++  +    L+   +   + +N  + + L R    L         I+E +  + +   L 
Sbjct: 81  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAG--AGG 127
           +   ++D+  + +  S+  Q I  ++     E L       + D +D  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D R+DT+RA GAGGQHVN
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPKDLRVDTFRARGAGGQHVN 317

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K           K 
Sbjct: 318 TTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKL 375

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 376 QVGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 426


>gi|170114318|ref|XP_001888356.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636668|gb|EDR00961.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 338

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 110/330 (33%), Positives = 172/330 (52%), Gaps = 19/330 (5%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P    +V+  K L +E + L  A     + +  L +   LL    ++ D ++     
Sbjct: 1   MSSPE---DVLRLKQL-KESKALQTAWDEWTQTRQLLDNTAPLL----DDPDPTMRSLAV 52

Query: 90  DNLQRIKLEVEYKQ---FESLLSGEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRW 144
           D    +   +       F SLL   + ++   A +E+ +G GG+ES  +   LLRMY R 
Sbjct: 53  DEYTSLTSTLTQFLESTFPSLLVPPSTTSHLSALMEMKSGVGGSESSLFLGDLLRMYQRL 112

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A   ++K + +  +D +  G K A + IKG  AY  L+ E GVHR+ R+   +S+ R HT
Sbjct: 113 ANVNRWKAQVVAQNDNDGGGTKDAIIEIKGDGAYDALRFESGVHRVQRVPATESSGRVHT 172

Query: 205 SFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           S  SI V P+V+++    E   S SD +++  RA GAGGQHVN T+SAVR+THIPTG+ V
Sbjct: 173 STVSIVVLPLVEETDTQAEELFSMSDIKLEVMRARGAGGQHVNKTESAVRLTHIPTGITV 232

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPY 320
             Q ERSQH+N+ +A+ +LR++L + +L +  E       +         +IR+Y     
Sbjct: 233 SMQDERSQHQNRRRAFQVLRSRLLDKKLTREMEERRDTRRNLVRGADRSEKIRTYNFV-Q 291

Query: 321 QMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           + V D R  +   + S VL+GD + DF+ A
Sbjct: 292 ERVTDHRIGLTLMNLSSVLEGDGIQDFIDA 321


>gi|332241803|ref|XP_003270069.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 1
           [Nomascus leucogenys]
 gi|332241805|ref|XP_003270070.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 445

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 112/352 (31%), Positives = 170/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D ++++++  D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLNPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K           K 
Sbjct: 317 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDRRQQQSA--RKL 374

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 375 QVGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|156844661|ref|XP_001645392.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116054|gb|EDO17534.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 404

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 22/342 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
             L  L     D + +          ++            E + +L D   L E+     
Sbjct: 51  DELDKLKKDMFDGNAFD-----VEQQKKYARFSTIADAFHEYKSQLDDYKGLNEMIK--S 103

Query: 81  DCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D ++  E S  L+++   +         + L   E       +E+  G GG E+  +A  
Sbjct: 104 DPALKDEASQELEQLIPLLNRSSSVLLDKLLPPHEFADKPCIIELRPGVGGIEAMIFAQD 163

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL MY  +A  +K+K E +  ++ E   GI  A L I  P AY  ++ E GVHR+ R+  
Sbjct: 164 LLNMYIGYATSKKWKHEIISRNENESGSGIVDAILSINEPGAYDRMRLEVGVHRVQRVPA 223

Query: 196 YDSNSRRHTSFSSIWVYPVV-------DDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
            ++  R HTS +++ V P +        ++ E      + RID  RA G GGQHVNTTDS
Sbjct: 224 TETKGRTHTSTAAVVVLPQLGNGSEREAEAYERTFKPDEIRIDVMRARGKGGQHVNTTDS 283

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVR+TH P+G+V+  Q ERSQHKNKA+A+ +L++KL E+E  ++EE        +     
Sbjct: 284 AVRLTHFPSGIVISMQDERSQHKNKAKAFAILKSKLAEIERLEKEEKERSARKEQVSTTD 343

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
              +IR+Y   P   + D R  +   + ++V+ G+ LD+ M 
Sbjct: 344 RSDKIRTYNY-PQNRITDHRCGLTLYALNEVITGERLDEVMD 384


>gi|50286945|ref|XP_445902.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525208|emb|CAG58821.1| unnamed protein product [Candida glabrata]
          Length = 405

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 165/346 (47%), Gaps = 21/346 (6%)

Query: 21  QRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + L+ L  +     D  +     +   LM     L +     KE      +   +++   
Sbjct: 55  KELAELEKQISNGYDEDV---QRKYNSLM----SLQDVYDRYKEQLGNYRELKEMID-VD 106

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +        E  + +  +K   +      +           LE+  G GG+E+  +A  L
Sbjct: 107 KSLAEEAAAELHELVPNLKKTTQDLLHRLIPPHPFAEKACMLELRPGVGGSEAMIFAKDL 166

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L MY  +A  +K+K   + I + E   GI  A L I  P  Y  LK E GVHR+ RI   
Sbjct: 167 LNMYIGYAHNKKWKHHIVSIRENEAGSGIMDAVLAIDEPGTYNILKYEAGVHRVQRIPAT 226

Query: 197 DSNSRRHTSFSSIWVYPVVDD------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +S  R HTS +++ V P + D      + E      + RID  RASG GGQHVNTT+SAV
Sbjct: 227 ESKGRTHTSTAAVVVLPQLGDEGKDLDAFERSFKPEEIRIDVKRASGKGGQHVNTTESAV 286

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWG 309
           R+THIPTG+++  Q ERSQH+NKA+A+++LR+KL ELE Q++ E+   + +   T +   
Sbjct: 287 RLTHIPTGIMIHMQDERSQHRNKAKAFSILRSKLAELEQQQKAEKERQVRKEQVTTMDRS 346

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
            +IR+Y       + D R  +       V+ G+ LDD + A  +  
Sbjct: 347 DKIRTYNFS-QNRITDHRCGLNLYDLEGVISGERLDDVINAVRSFD 391


>gi|3328106|gb|AAD12759.1| translational release factor 1 [Homo sapiens]
          Length = 445

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 165/351 (47%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +E Q+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEESRRSLNRRHAELAPLAAIYQETQETEQAIEELGSMC 137

Query: 77  LE---EDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
                 D+  +L+   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 138 KSLNKRDEKQLLELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFEPLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +      
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 376

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
            T      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 377 GTRAQ-SERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|72024372|ref|XP_797931.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115937037|ref|XP_001184225.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 422

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 102/320 (31%), Positives = 161/320 (50%), Gaps = 17/320 (5%)

Query: 47  RERQ----HLDNAISFIKEIQDRLCDNLILLELALE-------EDDCSILQETSDNLQRI 95
           +E +     L   +   +E+     +   L  L  E       ++   +     D+L  +
Sbjct: 81  KELRGSLMELGAVLDKWEELTSAEEEITELQRLIEEPSDTSQDKEMQELAAAEKDDLDAM 140

Query: 96  KLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
             ++  +  + LL S E D ND  +E  AG GG E+  +A  +  MY R+A  R +    
Sbjct: 141 IADISEELVDLLLPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRYAAYRGWTFSV 200

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE    +  G++ A++ + G  AY  L+ E GVHR+ R+   +S  R HTS  +I V P 
Sbjct: 201 LEYFTTDMGGLRHASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQ 260

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             + I++++   D R++T +ASGAGGQHVNTTDSAVRITH+PTG+  + QQERSQHKN++
Sbjct: 261 PKE-IDLKLDPKDLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRS 319

Query: 275 QAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A  ML+ ++Y   L  +     ++  S     G   +IR+Y  Q    + D R      
Sbjct: 320 IAMTMLQTRIYNRILADQTSSERSMRSSQVGTGGRSEKIRTYNYQ-QDRITDHRRGRTVH 378

Query: 334 SPSDVLDGD--LDDFMKATL 351
              + L G   LD+ + + +
Sbjct: 379 GVPEYLLGSELLDEMVTSCV 398


>gi|241998776|ref|XP_002434031.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215495790|gb|EEC05431.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 356

 Score =  212 bits (540), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 171/349 (48%), Gaps = 25/349 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D     + L   +          +    + L  +   L + ++ +K+I +   +   L +
Sbjct: 5   DLKQVEEELEKCSH---------DSQRTRELTAKMSRLSSIVALVKKINELNREMEGLKD 55

Query: 75  LALE---EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
           L  +     D  ++    D+ +  + E++    + L         D+ +  LEV AG GG
Sbjct: 56  LERDFTRTGDKDMVSMAVDDQKNCQAELKQLNDQILDQIVPPDPIDTTEVLLEVTAGVGG 115

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   +L MY R+A  + +    ++    +  G++ A+L + G +A   LK E GV
Sbjct: 116 QEAMLFTKDVLDMYVRYASWKGWSCRIVDYETSDMGGVRHASLNVGGRDAGKCLKFESGV 175

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +   R HTS  ++ V P+  + +++ ++  D  + T RASG GGQHVNTT+
Sbjct: 176 HRVQRVPQTERAGRIHTSTMAVAVLPLPAE-VDVVLNSKDLVMKTKRASGPGGQHVNTTE 234

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306
           SAV+I HIP+G++V+  QERSQ +NK  A   LRAKLYE+EL K+   ++     K ++ 
Sbjct: 235 SAVQIQHIPSGIMVESSQERSQLQNKELALKKLRAKLYEIELNKK--TSSHVTQRKLQVG 292

Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
             G   +IR+Y       V D R  +   +  D L G  +LD  ++  L
Sbjct: 293 TRGRSEKIRTYNFA-QDRVTDHRIPVTVHNVEDFLHGQDNLDSVIRRLL 340


>gi|73989052|ref|XP_542584.2| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 1 [Canis familiaris]
          Length = 456

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 108/338 (31%), Positives = 161/338 (47%), Gaps = 33/338 (9%)

Query: 43  KMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
           K L R    L         I+E +  + +   + +   ++D+  + +   +  Q I  ++
Sbjct: 103 KSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKI 162

Query: 100 EYK---QFESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                  F+SL+  E  D ND  +EV +G   GG   Q +   +  MY  ++  + +K E
Sbjct: 163 NVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFE 222

Query: 154 ALEIHDGE------------EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            L     +              G+  A   I G N Y  LK E GVHR+ RI     ++R
Sbjct: 223 LLNYTPADYGSDLKPCGFVIVGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSAR 282

Query: 202 R---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
               HT   S+ V P   D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG
Sbjct: 283 MQRIHTGTMSVIVLPQP-DEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTG 341

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSY 315
           +VV+CQQERSQ KNK  A  +LRA+LY  +    ++      + K ++G      +IR+Y
Sbjct: 342 LVVECQQERSQIKNKEIALRVLRARLY--QQIIEKDKCQQQSTRKLQVGTRAQSERIRTY 399

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
                  V D R   E     + L G+  LD  ++  L
Sbjct: 400 NF-TQDRVTDHRIAYEVRGIKEFLCGEKCLDQLIQRLL 436


>gi|297693940|ref|XP_002824258.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Pongo abelii]
 gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 445

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 168/351 (47%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENQRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQAIDQKINMLYNELFQSLVPKEKYDKNDVILEVAAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT  +S+ V P   D +++++   D RIDT+RA G GGQHVN
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTTSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGPGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302
            TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +      
Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 376

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
            T      +IR+Y       + D R   E     + L G   LD  ++  L
Sbjct: 377 GTRAQ-SERIRTYNF-TQDRISDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|307069624|ref|YP_003878101.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
 gi|306482884|gb|ADM89755.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
          Length = 345

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 167/329 (50%), Gaps = 12/329 (3%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K +D +++ N+ + K + +    +   I +    +  +       +     +D    
Sbjct: 23  LLKKIQDKNIFNNLKKYKKICKNIFKIRPIIKYYNLYKKEINKIKENKKFI---NDKEFK 79

Query: 86  QETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
               D +++ K +   +  K  ++++  +  +N   LE+ A +GG E+  +   L +MY 
Sbjct: 80  NIALDEIKKCKDKIFFLNKKIEKNIIINKNINNKILLEIRAASGGEEAALFVKDLYKMYF 139

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +++K  +K + L        G K   + I G N+Y  LK E G HR+ RI   +S+ + 
Sbjct: 140 NFSQKNNWKIKILSFIKSNNNGYKEIIIQIYGLNSYSLLKNESGNHRVQRIPITESHDKV 199

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  +I V   + ++ +I I+  D +I T++ASGAGGQHVN TDSAVRI HIPT + V+
Sbjct: 200 HTSTCTIAVINKIKNNKKILINNKDLKIHTFKASGAGGQHVNKTDSAVRIFHIPTKITVE 259

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
           CQ  RSQH NK  A  +L+ K+  L++ K        +  K+ IG G    +IR+Y   P
Sbjct: 260 CQSNRSQHINKKNALKILKYKI--LKINKNSIKNKEDKFRKSLIGTGKRSEKIRTYNF-P 316

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              V + + N+   + + +L+G+L+   K
Sbjct: 317 QNRVTNHKINLTVYNLNSILNGNLEKIFK 345


>gi|196013797|ref|XP_002116759.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
 gi|190580737|gb|EDV20818.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
          Length = 271

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 100/248 (40%), Positives = 153/248 (61%), Gaps = 9/248 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           + EAD ++A +E+ A  GG E+  +A  L +MY R+A  R +K EAL  H+ E  G K A
Sbjct: 4   NDEADDSNAIIEIRAATGGLEAALFAADLFQMYKRYASHRNWKFEALSFHENEVGGFKEA 63

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
              I G   +G +K E GVHR+ R+   +S+ R HTS +++ + P   + I+I I+++D 
Sbjct: 64  IASIVGAGVFGEMKLESGVHRVQRVPITESDGRVHTSTATVAILPQP-EEIDIVINKNDI 122

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           + DT+RA GAGGQHVNTTDSAVR+THIPTG++V  Q+E+SQH+NKA+A  +L+AKL++ +
Sbjct: 123 KFDTFRAQGAGGQHVNTTDSAVRLTHIPTGMIVAVQEEKSQHRNKAKAIQILQAKLFDEQ 182

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
              ++   +   + + +IG G    +IR+Y  Q    + D R N+      D L G+  L
Sbjct: 183 R--QQNQTDRVHARRQQIGTGARSERIRTYNYQ-QDRITDHRINMSLYGIDDFLSGNESL 239

Query: 344 DDFMKATL 351
           +  M + L
Sbjct: 240 NHLMSSLL 247


>gi|159474546|ref|XP_001695386.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
 gi|158275869|gb|EDP01644.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
          Length = 336

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 113/308 (36%), Positives = 161/308 (52%), Gaps = 13/308 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + + RE   L         +     +   L  LA +  D  +    +D    ++ E    
Sbjct: 8   RDVGREYARLQPLAHGYSRLLQVRAELSDLAGLARD-PDAGVRAMAADEAAALRQEAADL 66

Query: 103 QFESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-----KRKFKTE 153
               LL       + S  A LEV AGAGG E+  +A+ LL MY R A+      R +  E
Sbjct: 67  TRRLLLALVPPEPSASRPALLEVRAGAGGAEAALFASELLAMYRRLAQARTCASRGWTWE 126

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            LE+ + E  G++ AT+   G   YG L GE GVHR+ R+   ++  R HTS +++ V P
Sbjct: 127 VLELGNSEHGGVRHATVAGAGEGVYGVLSGESGVHRVQRVPVTEAGGRLHTSTAAVVVLP 186

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
              D +++ + E D R++T RASGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+
Sbjct: 187 QA-DEVDVRLREEDLRVETMRASGAGGQHVNVTDSAVRITHLPTGLVVSCQNERSQHLNR 245

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEK 332
           A A  +LR++LY+LE Q+R   A    S+    G    ++R+Y   P   V D R ++  
Sbjct: 246 AAALKVLRSRLYDLEAQRRARQAGEQRSALVASGDRSERVRTYNF-PQGRVTDHRIHLTV 304

Query: 333 TSPSDVLD 340
                VL+
Sbjct: 305 HDLGSVLE 312


>gi|302829783|ref|XP_002946458.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
 gi|300268204|gb|EFJ52385.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 108/335 (32%), Positives = 159/335 (47%), Gaps = 38/335 (11%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVE 100
           + + RE   L    +  + +     +   L  L  + D    ++ +E    LQ+    + 
Sbjct: 26  RDVGREYSLLKPLATAYERLLRVRRELEDLAALLKDPDSRVRAMAEEEGRELQQQAAGLT 85

Query: 101 YKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
            +   +L      D   A LE+ AGAGG E+  +   LL MY ++A  R +  + +E+  
Sbjct: 86  RRLLLALVPRDPRDGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTA 145

Query: 160 GEEAGIKS--ATLLIKGPNA------------------------------YGWLKGEQGV 187
            E  G        +  G  A                              YG L  E GV
Sbjct: 146 SEVPGGVKHVVAAVADGRGAGRRAGEIGDGGEGYDGGEGNGDQDGDAIGVYGTLLPESGV 205

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   D +++++ + D RI+T RASGAGGQHVN TD
Sbjct: 206 HRVQRVPVTEAQGRVHTSTVAVVVLPQA-DEVDVKLRDEDLRIETMRASGAGGQHVNVTD 264

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEI 306
           SAVRITH+PTG+VV CQ ERSQH N+A A  +LRA+LY+LE+QKR +E+     +     
Sbjct: 265 SAVRITHVPTGLVVSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASA 324

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               +IR+Y   P   V D RT++       VL G
Sbjct: 325 DRSERIRTYNF-PQGRVTDHRTHLTLHDLDSVLVG 358


>gi|40062727|gb|AAR37632.1| peptide chain release factor 1, degenerate [uncultured marine
           bacterium 438]
          Length = 358

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 168/342 (49%), Gaps = 10/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ + + S L  +     +  +        +E   L+  I   ++      +   L ++
Sbjct: 7   IEDLISKHSILEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTES 130
             +   D    +     L+ +KLE E  + +  L      EAD  +A +E+ AG GG E+
Sbjct: 65  LSDSSSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + ++K++ E + +   E  G+K     I+G N Y  LK E G    
Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGSSSC 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            + S Y ++    T     W      + ++I+I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 SKSSRYRNSREEFTLLQQQWAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309
           RITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  + E E +   +S        
Sbjct: 245 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGTGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            +IR+Y   P   V D R N+        L+G+  D+ +++ 
Sbjct: 305 ERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVESL 345


>gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 98/219 (44%), Positives = 143/219 (65%), Gaps = 1/219 (0%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+    RW  K+++K+  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP+
Sbjct: 7   LVAPTPRWGGKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPF 66

Query: 197 DSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++   R TSF+ + V P+  ++S+++EI E D  I   RA G GGQ+VN  ++AVR+ HI
Sbjct: 67  NAKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHI 126

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+ V+C +ERSQ  NK +A   L+AKL  +  ++R            +  WG+QIR+Y
Sbjct: 127 PTGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 186

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           V  PY++VKD+RT  E +  S V+DG+LD F+KA L  K
Sbjct: 187 VFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 225


>gi|50730809|ref|XP_417026.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 455

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 113/371 (30%), Positives = 172/371 (46%), Gaps = 26/371 (7%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVI-----EAKMLMRERQHLDNAIS 57
           L ++      L+  +   + L  L+ + +      N       E + L R R  L    +
Sbjct: 66  LRKKHQDSRALWKHEAVQKYLETLSKEYQQVDHLLNADSKNEFEQRTLRRRRADLSPVAT 125

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE------VEYKQFESLLSGE 111
             +EI++   +   L  +  E D     Q     L+  +        +  K F+ L+  E
Sbjct: 126 AFQEIREAESELQELETMCRELDSRDEKQLLELALEEKETLDKKINTLCRKLFQLLVPKE 185

Query: 112 -ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
             D +   LEV AG   GG   Q +   +  MY  +A+ + +  + L     E  G+  A
Sbjct: 186 KYDKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHA 245

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISE 225
              I G + Y  LK E G HR+ RI     +SR    HT   S+ V P   + +++++  
Sbjct: 246 AAHISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQP-EEVDVKVDP 304

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RA GAGGQHVN TDSAVRI H+PTGVVV+CQQERSQ  NK  A   LRAKLY
Sbjct: 305 KDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLY 364

Query: 286 ELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG- 341
             +    ++++    + K ++G      +IR+Y       V D R + +  +  ++L G 
Sbjct: 365 --QQIIEKQLSQEQSARKLQLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGK 421

Query: 342 -DLDDFMKATL 351
            +LD  +   L
Sbjct: 422 EELDKLINRLL 432


>gi|325973695|ref|YP_004250759.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
 gi|325990139|ref|YP_004249838.1| peptide chain release factor 1 [Mycoplasma suis KI3806]
 gi|323575224|emb|CBZ40889.1| Peptide chain release factor 1 [Mycoplasma suis]
 gi|323652297|gb|ADX98379.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
          Length = 359

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 8/308 (2%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            L +E       I      +  + D     E   +  D        +  + ++ ++E  +
Sbjct: 36  ALQKEISKNRELIEKFSSYKKYISDYEECKESISKGKDAEFKSLLEEECRLLEKKIEQLE 95

Query: 104 FES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
            E       S + D  +  +E+H+ AGG E+  + + L   Y ++A + K+K   +++ +
Sbjct: 96  QELKSDLFPSNKYDGKNIVIEMHSAAGGEEAAIFVSNLFDSYKKYANENKWKLNVVDLRE 155

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            E  G+   T  + G   Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D I
Sbjct: 156 SE-RGLAFITFTLSGSKVYSKMKYESGVHRVQRVPETESKGRVHTSTITVSVLPEA-DEI 213

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           EI++  SD RID YRASGAGGQHVN T+SAVR+ HIPT ++V CQQERSQ  NK  A+ +
Sbjct: 214 EIQLDPSDIRIDVYRASGAGGQHVNKTESAVRLVHIPTNIMVACQQERSQMLNKEIAFKI 273

Query: 280 LRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           L+ KL+E E + ++EE  +  +    +     +IR+Y   P   + D R  +   + + V
Sbjct: 274 LKTKLWEREKKLQKEEFFSNLKQQIGKGERAEKIRTYNY-PQNRITDHRILLTINNLTSV 332

Query: 339 LDGDLDDF 346
           ++G  +  
Sbjct: 333 MEGHFEQI 340


>gi|26346685|dbj|BAC36991.1| unnamed protein product [Mus musculus]
          Length = 446

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 169/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILL 73
           ++  +    L+   +   + +N  + + L R    L         I+E +  + +   L 
Sbjct: 81  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAG--AGG 127
           +   ++D+  + +  S+  Q I  ++     E L       + D +D  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D R+DT+RA GAGGQHVN
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPKDLRVDTFRARGAGGQHVN 317

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K           K 
Sbjct: 318 TTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKL 375

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 376 QVGTRAQSERIRTYNF-TQDRVTDPRIAYEVRDIKEFLRGEKCLDQLIERLL 426


>gi|147836146|emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 171/341 (50%), Gaps = 8/341 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + +  R   +  K    +LW +V ++  ++ +       +  +K++  +  +  ++ +L 
Sbjct: 110 EASRIRQEEMIRKY---NLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLV 166

Query: 77  L-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             +  +  + ++  +    +   +   +   LL G+ D   A L + AG  G  S+ WA 
Sbjct: 167 EMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAE 226

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LL MYT+WAEK+ +K   +E +  +  GIKSAT+  +    YG+L GE+GVH ++R S 
Sbjct: 227 QLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSD 286

Query: 196 YDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
            +S     T  + + V P+  ++  +++I + D RI +    G        T  AV I H
Sbjct: 287 DESILHEQTGSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGV---EQGRTGHAVCIQH 343

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+ VQ   ERS   NK +A N L+AKL    +++        +       W ++ R 
Sbjct: 344 IPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQETRR 403

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           YV  P ++V+D++T+I+    + VLDG+++  + A +++++
Sbjct: 404 YVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 444


>gi|109502759|ref|XP_001073018.1| PREDICTED: CG5705-like [Rattus norvegicus]
 gi|149050030|gb|EDM02354.1| rCG37077, isoform CRA_b [Rattus norvegicus]
          Length = 446

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 169/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +        L+   +D  + ++  + +   R    L   ++  +EIQ     + +   + 
Sbjct: 81  EGLNDEYQSLDQCLQD--ISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELESMC 138

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAG--AGG 127
           +   ++D+  + +  S+  Q I  ++     E L       + D ++  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D R+DT+RA GAGGQHVN
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPRDLRVDTFRARGAGGQHVN 317

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY  +    ++      + K 
Sbjct: 318 TTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLY--QQIIEKDKCQQQNARKL 375

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 376 QVGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 426


>gi|312220543|emb|CBY00484.1| similar to peptide chain release factor 1 [Leptosphaeria maculans]
          Length = 418

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 94/336 (27%), Positives = 161/336 (47%), Gaps = 27/336 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNL----QRIKLE 98
            + ++       ++ + +          L  L  +   D  + +  +D+L    +++   
Sbjct: 67  RIAKKLGEYSPIVNALGKWDKANESVTELTSLIHDSTTDPELRELAADDLIETREQLSAA 126

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA---L 155
            +      +           LE+  GAGG+E+  +A  L RMY  +  +  F+T      
Sbjct: 127 SQSLITALVPVHPFAHLPCLLELRPGAGGSEAAIFAGDLFRMYLAFCNRNGFRTNLLKYE 186

Query: 156 EIHDGEEAGIK--SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            I+   EAG+    A L ++  NAYG  + E GVHR+ R+   ++  R HTS  S+ V P
Sbjct: 187 NINGTSEAGVPLSEAVLEVENDNAYGVFRCEAGVHRVQRVPATETKGRTHTSAVSVHVLP 246

Query: 214 VVDD-----------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            + +             +  I   + +++  RASGAGGQHVN T+SAVR+TH+PT  VV 
Sbjct: 247 SLQENNSSEENFDDPDSDYYIDVKEVKVEVMRASGAGGQHVNKTESAVRLTHLPTNTVVA 306

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT---EIGWGRQIRSYVLQP 319
            Q  RSQHKNK +AW +LR+++ +   ++REE  +    S     ++G G ++R+Y    
Sbjct: 307 MQDSRSQHKNKEKAWALLRSRIAQSRREQREEEISNMRRSVIGVAKMGRGDKVRTYNWG- 365

Query: 320 YQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
            Q V D R+ +      DV++G  +L+  M++  + 
Sbjct: 366 QQRVTDHRSGLTVHDLDDVMEGGQNLEKVMESVRSW 401


>gi|290982185|ref|XP_002673811.1| predicted protein [Naegleria gruberi]
 gi|284087397|gb|EFC41067.1| predicted protein [Naegleria gruberi]
          Length = 324

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 109/306 (35%), Positives = 161/306 (52%), Gaps = 29/306 (9%)

Query: 75  LALEEDDCSILQETSDNLQRIKLE---VEYKQFESLL----SGEAD-----SNDAYLEVH 122
           +   E D  + Q   +     ++E    + +    LL    S   D     +++A +E+ 
Sbjct: 1   MMNTEKDPELKQLAKEEYSETEIEYSKTQERLISVLLNAPVSDTEDHQISPNSNAIIEIR 60

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP------ 175
            G GG E+  +A  L +MY  +A KR +K E L +       G K    LI G       
Sbjct: 61  PGTGGDEASLFAMELFKMYEFYATKRGWKFEVLSLSANNGGEGCKEGIALISGSSYGDDE 120

Query: 176 --NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
               YG +K E GVHR+ R+   +S  R HTS +SI V P V ++ +++I+ +D RIDT 
Sbjct: 121 GLGVYGCMKFESGVHRVQRVPATESQGRVHTSSASIVVLPEVTEA-DVKINLADVRIDTM 179

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVNTTDSAVR+THIPTG VV    ERSQH+NK +A+ +L ++LY+ +    E
Sbjct: 180 RASGAGGQHVNTTDSAVRLTHIPTGTVVCIADERSQHRNKEKAFKILHSRLYQKQQD--E 237

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           +I  +    K +IG G    +IR+Y   P   + D R +  +     ++DG+ LD F + 
Sbjct: 238 KIQKMSSERKEQIGSGDRSDKIRTYNF-PQDRITDHRISFSQFGLDKMMDGEILDSFFEI 296

Query: 350 TLAIKK 355
               +K
Sbjct: 297 LAKQEK 302


>gi|315304796|ref|ZP_07874958.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
 gi|313626836|gb|EFR95807.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
          Length = 229

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 81/216 (37%), Positives = 127/216 (58%), Gaps = 3/216 (1%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           + RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ R+   
Sbjct: 1   MFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQRVPET 60

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR+THIP
Sbjct: 61  ESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVRLTHIP 119

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSY 315
           TG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +S+        +IR+Y
Sbjct: 120 TGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTGDRSERIRTY 179

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              P   V D R  +       +++G LD+ + A +
Sbjct: 180 NY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 214


>gi|68486191|ref|XP_709944.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|46434441|gb|EAK93850.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|238881487|gb|EEQ45125.1| peptide chain release factor 1, mitochondrial precursor [Candida
           albicans WO-1]
          Length = 394

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 148/341 (43%), Gaps = 31/341 (9%)

Query: 40  IEAKMLMRERQHLDNAI------------SFIKEIQDRLCDNLIL----LELALEEDDCS 83
             A+ + +E + L   +                 I         L    +EL    DD  
Sbjct: 52  QRAQTIQQEHKELSEKLADKYIPDLQVKFDNYTNILSMFDKLETLTQEYIELTEITDDPD 111

Query: 84  ILQETSDNLQRI---KLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLL 138
           + +E  + L+ I   ++E    +    L            +E+  G GG E+  +   LL
Sbjct: 112 LYKEAQEELKSIVIPQIEKLVSELRVKLRPPVKYADKGCIIELRPGVGGNEASLFTGDLL 171

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY  +A +  +K + +         I  A L I    +Y  ++ E GVHR+ RI   ++
Sbjct: 172 NMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRIPETET 231

Query: 199 NSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
             R HTS +++ V P + +         E   +  + RIDT RA G GGQHVNTTDSAVR
Sbjct: 232 KGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTTDSAVR 291

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           + HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++   +   +     +      
Sbjct: 292 LLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQVSSTDRSD 351

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
           +I++Y  +    V D R N        VL+G  L   +   
Sbjct: 352 KIKTYNYKE-NRVTDHRINYSMHDLEGVLEGRKLGQLIDVY 391


>gi|317033212|ref|XP_001395081.2| peptide chain release factor 1 [Aspergillus niger CBS 513.88]
          Length = 429

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 151/338 (44%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV--- 99
            L +    L    S +KE +        LL L  + E D  +     ++L+  K+ +   
Sbjct: 68  KLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPETDAELRSLAVEDLESSKIALPAI 127

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LE 156
            +  +   +           LE+  GAGG E+  +A  +LRMY  +  +R F+      +
Sbjct: 128 ADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQD 187

Query: 157 IHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           + DG  +  +  A L +    AY  L+ E GVHR+ R+   ++  R HTS  S+ + P  
Sbjct: 188 VADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSF 247

Query: 216 DDS--------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            DS               +  +   + R +  RA GAGGQHVN T+SA+R+THIPTG VV
Sbjct: 248 PDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVV 307

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 308 SMQDSRSQHANRKKAWQVLRARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTYNY 367

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R+ +   +   VLDG   L+  M +    
Sbjct: 368 G-QNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 404


>gi|303310501|ref|XP_003065262.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240104924|gb|EER23117.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034924|gb|EFW16867.1| peptide chain release factor 1 [Coccidioides posadasii str.
           Silveira]
          Length = 438

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 30/336 (8%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV-- 99
           K   +    L   +  +KE          L  L  +   D  + +  SD+LQ     +  
Sbjct: 68  KETAKRVGELTATVQALKEWDKAHESIAELNHLLDDPSSDPELRELASDDLQTTVSSLFA 127

Query: 100 --EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK------ 151
                +   +           +E+  GAGG E+  +A+ LLRMY  +  +   +      
Sbjct: 128 LSGKLKESLIPRHPFAELPCLVEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKK 187

Query: 152 -TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E      G E  +  A + I+ P +Y  L+ E GVHR+ RI   ++  R HTS  S+ 
Sbjct: 188 DVEDGAGGSGSEDRLSEAVMEIEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVM 247

Query: 211 VYPVVDD-----------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           + P   +           + +  I+  D + +  RASGAGGQHVN T+SA+R+TH+PT  
Sbjct: 248 ILPSFSEQNDSALNFDDPNSDYYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTST 307

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSY 315
           VV  Q  RSQH+N+ +AW +LR+K+ ++  + RE+               +G G ++R+Y
Sbjct: 308 VVAVQDSRSQHENRRKAWRLLRSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTY 367

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
                    D R+ +   +   VLDG   LD+ M++
Sbjct: 368 NFG-QNRCTDHRSGVTIHNLGSVLDGGEGLDNIMES 402


>gi|119195451|ref|XP_001248329.1| peptide chain release factor 1, mitochondrial precursor (MRF-1)
           [Coccidioides immitis RS]
          Length = 438

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 30/336 (8%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV-- 99
           K   +    L   +  +KE          L  L  +   D  + +  SD+LQ     +  
Sbjct: 68  KETAKRVGELTATVQALKEWDKAHESIAELNHLLDDPSSDPELRELASDDLQTTVSSLFA 127

Query: 100 --EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK------ 151
                +   +           +E+  GAGG E+  +A+ LLRMY  +  +   +      
Sbjct: 128 LSGKLKESLIPRHPFAELPCLVEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKK 187

Query: 152 -TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E      G E  +  A + I+ P +Y  L+ E GVHR+ RI   ++  R HTS  S+ 
Sbjct: 188 DVEDGAGGSGSEDRLSEAVMEIEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVM 247

Query: 211 VYPVVDD-----------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           + P   +           + +  I+  D + +  RASGAGGQHVN T+SA+R+TH+PT  
Sbjct: 248 ILPSFSEQNDSALNFDDPNSDYYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTST 307

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSY 315
           VV  Q  RSQH+N+ +AW +LR+K+ ++  + RE+               +G G ++R+Y
Sbjct: 308 VVAVQDSRSQHENRRKAWRLLRSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTY 367

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
                    D R+ +   +   VLDG   LD+ M++
Sbjct: 368 NFG-QNRCTDHRSGVTIHNLGSVLDGGEGLDNIMES 402


>gi|116198067|ref|XP_001224845.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
 gi|88178468|gb|EAQ85936.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
          Length = 400

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 37/347 (10%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ---- 93
           +  +AK    E   + +A+  +++ +  L +   LLE     +D  + +   D+L+    
Sbjct: 34  DAKKAKRAG-ELSRVASAVKELEKAKAALVELQGLLE----SNDAEMRELARDDLEATNA 88

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++                       LE+  G GG E + +A+ L +MY  +   + ++T 
Sbjct: 89  QLAESSHNLSVALTPKHPFADMPCLLEIRPGPGGLEGRFFADSLFQMYKAYCSNKGYRTR 148

Query: 154 ALEIHDGEEAGI---------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            ++    +  G          + A L ++   AYG  +GE G+HR+ R+   + + R HT
Sbjct: 149 IVQYEASDSDGSTGSEGEIPLQEAVLEVQEEGAYGLFRGEAGMHRVQRVPATEKSGRTHT 208

Query: 205 SFSSIWVYPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           S  ++WV P   ++              +  I  ++ R +T RA GAGGQHVN T+SA+R
Sbjct: 209 SAVAVWVLPSFPENGTSDSEADWDKPESDFYIDPNEVRSETMRAGGAGGQHVNKTESAIR 268

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGW 308
           +THIPTG  V  Q  RSQ +N+  AW +LR++L +   + REE A    SS    ++I  
Sbjct: 269 LTHIPTGTTVSMQDSRSQQRNREDAWRLLRSRLAQQRREAREEQARQLRSSVLANSQITR 328

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353
           G +IR+Y  Q      D R+ +   +  DVL G   L+  M +    
Sbjct: 329 GDKIRTYQYQ-QDRCTDHRSGLNTHNLPDVLRGGETLEKVMDSVQNW 374


>gi|148703820|gb|EDL35767.1| mitochondrial translational release factor 1, isoform CRA_b [Mus
           musculus]
          Length = 440

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 162/338 (47%), Gaps = 22/338 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILL 73
           ++  +    L+   +   + +N  + + L R    L         I+E +  + +   L 
Sbjct: 99  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 156

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAG--AGG 127
           +   ++D+  + +  S+  Q I  ++     E L       + D +D  LEV +G   GG
Sbjct: 157 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 216

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 217 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 276

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D R+DT+RA GAGGQHVN
Sbjct: 277 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPKDLRVDTFRARGAGGQHVN 335

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K           K 
Sbjct: 336 TTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKL 393

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++G      +IR+Y       V D R   E      V+
Sbjct: 394 QVGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDI-KVM 429


>gi|67969776|dbj|BAE01236.1| unnamed protein product [Macaca fascicularis]
          Length = 378

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 23/352 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 13  ENLNKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 70

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SLL  E  D ND  LEV +G   GG
Sbjct: 71  KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 131 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 190

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGGQHVN
Sbjct: 191 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGGQHVN 249

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K +         K 
Sbjct: 250 TTVSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKCQQQSA--RKL 307

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 308 QVGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 358


>gi|326914097|ref|XP_003203364.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Meleagris gallopavo]
          Length = 455

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 108/353 (30%), Positives = 164/353 (46%), Gaps = 23/353 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +    +N+        +N  E + L R    L    +  +EI++   +   L  +
Sbjct: 86  LETLSKEYQQVNSLLNADS--KNEFEQRTLRRRSADLSPVATAFQEIKEAEGELRELETM 143

Query: 76  ALEEDDCSILQETSDNLQRIKLE------VEYKQFESLLSGE-ADSNDAYLEVHAG--AG 126
             E       Q     L+  +        +  K F+ L+  E  D +   LEV AG   G
Sbjct: 144 CRELGSREEKQLLELALEEKETLNKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTTG 203

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G   Q +   +  MY  +A+ + +  + L     E  G+  A   I G + Y  LK E G
Sbjct: 204 GDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEGG 263

Query: 187 VHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
            HR+ RI     +SR    HT   S+ V P   + +++++   D RIDT+RA GAGGQHV
Sbjct: 264 THRVQRIPETGLSSRMQRIHTGTMSVIVLPQP-EEVDVKVDPKDLRIDTFRAKGAGGQHV 322

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRI H+PTGVVV+CQQERSQ  NK  A   LRAKLY  +    ++++    + K
Sbjct: 323 NKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLY--QQIIEKQLSQEQSARK 380

Query: 304 TEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
            ++G      +IR+Y       V D R + +  +  ++L G  +LD  +   L
Sbjct: 381 LQLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEELDKLINRLL 432


>gi|68486252|ref|XP_712983.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
 gi|46434408|gb|EAK93818.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
          Length = 394

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 149/341 (43%), Gaps = 31/341 (9%)

Query: 40  IEAKMLMRERQHLDNAI------------SFIKEIQDRLCDNLIL----LELALEEDDCS 83
             A+ + +E + L   +                 I         L    +EL    DD  
Sbjct: 52  QRAQTIQQEHKELSEKLADKYIPDLQMKFDNYTNILSMFGKLETLTQEYIELTEITDDPD 111

Query: 84  ILQETSDNLQRI---KLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLL 138
           + +E  + L+ I   ++E    +    L       +    +E+  G GG E+  +   LL
Sbjct: 112 LYKEAQEELKSIVIPQIEKLVSELRVKLRPPVKYANKGCIIELRPGVGGNEASLFTGDLL 171

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY  +A +  +K + +         I  A L I    +Y  ++ E GVHR+ RI   ++
Sbjct: 172 NMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRIPETET 231

Query: 199 NSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
             R HTS +++ V P + +         E   +  + RIDT RA G GGQHVNTTDSAVR
Sbjct: 232 KGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTTDSAVR 291

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGR 310
           + HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++   +   +     +      
Sbjct: 292 LLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQVSSTDRSD 351

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
           +I++Y  +    V D R N        VL+G  L   +   
Sbjct: 352 KIKTYNYKE-NRVTDHRINYSMHDLEGVLEGRKLGQLIDVY 391


>gi|301029486|ref|ZP_07192568.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
 gi|299877629|gb|EFI85840.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
          Length = 219

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 2/205 (0%)

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R+++ E +   +GE  G K     I G   YG LK E G HR+ R+   +S  R HTS  
Sbjct: 1   RRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSAC 60

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 61  TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 120

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDL 326
           SQHKNKA+A ++L A+++  E+ KR++       +    G    + R+Y   P   V D 
Sbjct: 121 SQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDH 179

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351
           R N+      +V++G LD  ++  +
Sbjct: 180 RINLTLYRLDEVMEGKLDMLIEPII 204


>gi|134079787|emb|CAK40922.1| unnamed protein product [Aspergillus niger]
          Length = 462

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 151/338 (44%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV--- 99
            L +    L    S +KE +        LL L  + E D  +     ++L+  K+ +   
Sbjct: 101 KLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPETDAELRSLAVEDLESSKIALPAI 160

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LE 156
            +  +   +           LE+  GAGG E+  +A  +LRMY  +  +R F+      +
Sbjct: 161 ADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQD 220

Query: 157 IHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           + DG  +  +  A L +    AY  L+ E GVHR+ R+   ++  R HTS  S+ + P  
Sbjct: 221 VADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSF 280

Query: 216 DDS--------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            DS               +  +   + R +  RA GAGGQHVN T+SA+R+THIPTG VV
Sbjct: 281 PDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVV 340

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 341 SMQDSRSQHANRKKAWQVLRARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTYNY 400

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R+ +   +   VLDG   L+  M +    
Sbjct: 401 G-QNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 437


>gi|224043444|ref|XP_002196330.1| PREDICTED: mitochondrial translational release factor 1
           [Taeniopygia guttata]
          Length = 418

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 104/353 (29%), Positives = 164/353 (46%), Gaps = 23/353 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    ++ +     L  +  + + L R    L    +  +EI++   +   L  +
Sbjct: 50  LESLSKEYQQVSHQLSAHSL-NDFEQ-RTLRRRCADLSPIAAAFQEIKEAEREVQELEAM 107

Query: 76  ALEEDDCSILQETSDNLQRIKLE------VEYKQFESLLSGE-ADSNDAYLEVHAG--AG 126
             E D     Q     L+  +        +  K F+ L+  E  D +   LEV AG   G
Sbjct: 108 CTELDSRDEKQLLELALEEKESLDKKMNMLCRKLFQLLVPKEKYDRSSVILEVTAGRTTG 167

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G   Q +   +  MY  +A+ +++  + +     E  G+  A   I G N Y  LK E G
Sbjct: 168 GDICQQFTKEMFDMYQSYADYKRWTFDIVNYTPAEIGGLHHAAAHISGENVYRHLKYEGG 227

Query: 187 VHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
            HR+ RI     +SR    HT   S+ V P   + +++++   D RIDT+RA GAG QHV
Sbjct: 228 THRVQRIPETGMSSRMQRIHTGTMSVIVLPQP-EEVDVKVDPKDLRIDTFRAKGAGEQHV 286

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRI H+PTG+ V+CQQERSQ  NK  A   LRAKLY  +    ++++    + K
Sbjct: 287 NKTDSAVRIVHLPTGLAVECQQERSQQLNKEIALRTLRAKLY--QQLVEKQLSQEQSARK 344

Query: 304 TEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
            ++G      +IR+Y       V D R + +  +  ++L G   LD  +   L
Sbjct: 345 LQLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEALDKLINRLL 396


>gi|158300556|ref|XP_320444.4| AGAP012082-PA [Anopheles gambiae str. PEST]
 gi|157013216|gb|EAA00433.4| AGAP012082-PA [Anopheles gambiae str. PEST]
          Length = 384

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 166/312 (53%), Gaps = 10/312 (3%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLS 109
           L N +   ++ +  + +   L EL  ++DD    +L+E  +    I   ++ +    +LS
Sbjct: 61  LSNVVEMYEQRKIIVDNLSSLKELKDDKDDEMVQLLKEEREAYGSILFRLDSEILNGILS 120

Query: 110 --GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
              E D     +EV AG GG E+  +A  L  MY  + E + ++ E L+  + +  G + 
Sbjct: 121 MDDEEDYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRH 180

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           AT +I GP+AY +LK E GVHR+ RI   + + R HTS  ++ + P   D  ++E+ E D
Sbjct: 181 ATTVISGPDAYRYLKHEGGVHRVQRIPATEKSGRIHTSTVTVSIIPRP-DDFQVELKEKD 239

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  A   L AKL ++
Sbjct: 240 LKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQI 299

Query: 288 ELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG--DL 343
           EL+ R       + S+  +     +IR+Y       + D R       +    L+G   L
Sbjct: 300 ELEARFSSTQALKKSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGTAHNLKGFLEGGEQL 358

Query: 344 DDFMKATLAIKK 355
           DD ++     ++
Sbjct: 359 DDMIEKLRRSQR 370


>gi|331674376|ref|ZP_08375136.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
 gi|331068470|gb|EGI39865.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
          Length = 184

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 91/184 (49%), Positives = 117/184 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W     A+ L +ER  L+  +  + +++  L D   LLELA+E DD     E  
Sbjct: 1   MEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R 
Sbjct: 61  AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS 
Sbjct: 121 FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSA 180

Query: 210 WVYP 213
             YP
Sbjct: 181 VCYP 184


>gi|303287338|ref|XP_003062958.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455594|gb|EEH52897.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 294

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 111/286 (38%), Positives = 157/286 (54%), Gaps = 8/286 (2%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A +++  S+  E  D L      +E K     L S +AD   A LE+ AGAGG E+  +A
Sbjct: 4   ASDDELASMASEEHDALASTVPALEEKLAHLLLPSDDADDGGAILEIRAGAGGDEAARFA 63

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY  +A +R +  E +     +E G K  T  + G + YG LK E GVHR VR  
Sbjct: 64  ANLARMYDMFARRRGWTFERMTATTTDEGGYKDVTFNVSGDDVYGTLKYESGVHRRVRRV 123

Query: 195 PYDS--NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              S    + HTS +S+ V P   + +E+++ + D RIDT RASGAGGQHVNTT+SAVR+
Sbjct: 124 QRVSGDEGKVHTSTASVAVMPHA-EEVELDLRDEDVRIDTMRASGAGGQHVNTTNSAVRL 182

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQ 311
           TH+P+G VV    ERSQHKNK +A+ +LRA++YE L  +   E A+  +S         +
Sbjct: 183 THVPSGTVVVMMDERSQHKNKEKAFKILRARIYEGLRAEAHRERADQRKSLIGSGDRSER 242

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAIKK 355
           +R+Y  +    VKD R N +      +L+G   L D + A    +K
Sbjct: 243 VRTYNYKD-GRVKDHRVNAQVNDLEGLLNGGDALSDIVDALRTEEK 287


>gi|161833777|ref|YP_001597973.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
 gi|152206267|gb|ABS30577.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
          Length = 214

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 94/216 (43%), Positives = 149/216 (68%), Gaps = 4/216 (1%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           ML RMY  WAEK  FK + +    G+  G++S T ++KG + +G+LKGE GVHRLVRISP
Sbjct: 1   MLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGYLKGENGVHRLVRISP 60

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D++ +RHTSF+S+++YP++DD I I+I+ SD   +T+R+ G+GGQ+VN  +S VR+ H 
Sbjct: 61  FDNS-KRHTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGGQNVNKVESGVRLHHH 119

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PT ++++  + +SQ  NK +A  +L+++L+ +E + +    N     K +I W  QIR+Y
Sbjct: 120 PTNIIIENSETKSQFNNKIKALKLLKSRLFYIEKKSKNTTCNKL---KKKIEWSSQIRNY 176

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ PY++VKDLRT  E +    VL+G++D F+K  L
Sbjct: 177 IMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 212


>gi|114052118|ref|NP_001040455.1| mitochondrial translational release factor 1 [Bombyx mori]
 gi|95102962|gb|ABF51422.1| mitochondrial translational release factor 1 [Bombyx mori]
          Length = 401

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 14/337 (4%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS----I 84
             E  +L   + ++    R  Q +   ++ +++          L EL  +E D S    +
Sbjct: 46  MVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 105

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           ++E +    +   E++      LL          LE+ AGAGG E+  +A  L  MY  +
Sbjct: 106 IKEEAAIYLKRLKEIDDDLQLILLEPPLTEGGVLLELTAGAGGQEAMLFAKELFNMYQSY 165

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A  + ++ +       E  G++  ++LI+G      ++ E GVHR+ RI   +   R HT
Sbjct: 166 AINKGWEVDIASFDLTEIGGVRKGSMLIQGFGVPELMRMEAGVHRVQRIPATEKGGRIHT 225

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  ++ + P   + IE+ I E D  I+T RASGAGGQHVNTTDSAVR+ H PTG  V+CQ
Sbjct: 226 STVTVAILPQPSE-IELNIPERDVVIETKRASGAGGQHVNTTDSAVRLIHTPTGTTVECQ 284

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
           + RSQ KNK  A   LR  L  LE Q +E+   +    K+++G G    +IR+Y   P  
Sbjct: 285 EGRSQIKNKQIAMQKLRTLL--LEKQIQEQALKLQSERKSQVGSGNRNEKIRTYNF-PQD 341

Query: 322 MVKDLR-TNIEKTSPSDVLDG--DLDDFMKATLAIKK 355
            V + R       +    ++G   L+   ++ L  ++
Sbjct: 342 RVTEHRDGGGTFHNLKGFMEGGEQLEQLQESLLKKER 378


>gi|154310299|ref|XP_001554481.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
 gi|150851401|gb|EDN26594.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
          Length = 402

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 33/342 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYK 102
            + +    L +    +++ ++       L +L  +   D  + +   ++L      +E  
Sbjct: 42  KIAKRIGELQDVAVALRKWEETKESLSELDDLLKDSATDEELRELAVEDLTTTTAHLEEL 101

Query: 103 ----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LE 156
                               LE+  GAGG E+  +A  LLRMY  +  +++F++     E
Sbjct: 102 SRNLTTSLTPKHPFAELPCLLEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYE 161

Query: 157 IHDGEEAGIK----SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             DGE AG         L I+   +Y  L+GE GVHR+ R+   +   R HTS  S+ V 
Sbjct: 162 TTDGEGAGSDAPISEVVLEIESSGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVL 221

Query: 213 PVVDDS----------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           P    +                 +  ++ +D R D  RA GAGGQHVNTTDSAVR+TH+P
Sbjct: 222 PSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVP 281

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI---ANIGESSKTEIGWGRQIR 313
           T  VV  Q+ RSQ +N+ +AW +LR++L   + + REE             ++G G +IR
Sbjct: 282 TNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIR 341

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           +Y     Q V D R+ +   +  DV++G  +L+  + +  A 
Sbjct: 342 TYNWG-QQRVTDHRSGLSVHNLDDVMEGGDELEKIIDSVKAW 382


>gi|312375908|gb|EFR23156.1| hypothetical protein AND_13424 [Anopheles darlingi]
          Length = 406

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 106/313 (33%), Positives = 163/313 (52%), Gaps = 10/313 (3%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLL 108
            L N +   ++ +  + +   L EL  ++DD    +L+E  +    I   ++ +  E +L
Sbjct: 82  ALSNVVEMYEQRKIVVENLGSLKELKDDKDDEMIQLLKEEREAYSNILGRLDREIMEGIL 141

Query: 109 SGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           S + D       +EV AG GG E+  +A  L  MY  + E + ++ E L+    +  GI+
Sbjct: 142 SMDEDEEYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEHKDWEVEMLQTEGTDLGGIR 201

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT++I G + Y  LK E GVHR+ RI   + + R HTS  ++ + P   D  E+++ E 
Sbjct: 202 HATIIINGTDVYRCLKYEGGVHRVQRIPATEKSGRIHTSTVTVAIIPRP-DDFEVDLKEK 260

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  A   L AKL +
Sbjct: 261 DLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQVKNREIAKQKLVAKLMQ 320

Query: 287 LELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG--D 342
            EL+ R       + S+  +     +IR+Y       + D R       +    L+G   
Sbjct: 321 QELEARFASTQALKKSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGTVHNLKGFLEGGQQ 379

Query: 343 LDDFMKATLAIKK 355
           LDD +      ++
Sbjct: 380 LDDMIDKLHRSER 392


>gi|158300562|ref|XP_320450.4| AGAP012078-PA [Anopheles gambiae str. PEST]
 gi|157013219|gb|EAA00316.4| AGAP012078-PA [Anopheles gambiae str. PEST]
          Length = 760

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 15/300 (5%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYL 119
           +Q  L D+        +++   +L+E  +    I   ++ +    +LS   E D     +
Sbjct: 456 LQRELKDD-------KDDEMVQLLKEEREAYGSILFRLDSEILNGILSMDDEEDYGSLIM 508

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           EV AG GG E+  +A  L  MY  + E + ++ E L+  + +  G + AT +I GP+AY 
Sbjct: 509 EVTAGVGGQEAMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRHATTVISGPDAYR 568

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E GVHR+ RI   + + R HTS  ++ + P   D  ++E+ E D +I+T RASGAG
Sbjct: 569 YLKHEGGVHRVQRIPATEKSGRIHTSTVTVSIIPRP-DDFQVELKEKDLKIETKRASGAG 627

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  A   L AKL ++EL+ R       
Sbjct: 628 GQHVNTTDSAVRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQIELEARFSSTQAL 687

Query: 300 ESSKT-EIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG--DLDDFMKATLAIKK 355
           + S+  +     +IR+Y       + D R       +    L+G   LDD ++     ++
Sbjct: 688 KKSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGTAHNLKGFLEGGEQLDDMIEKLRRSQR 746


>gi|315047700|ref|XP_003173225.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
 gi|311343611|gb|EFR02814.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
          Length = 438

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQR----IKL 97
           +   +    L    + +++          L  L  E   D  +     D++      +  
Sbjct: 71  RAAAKRIGELAPVANALRDWDTAHESITELQGLVNEPSTDAELKSLAEDDITTTIGTLSS 130

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAGI------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              + AG           + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGAGAGAEDRLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P   +S              +  ++  D + + +RASGAGGQHVN T+SAVR+TH+PTG
Sbjct: 251 LPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHVPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  +++    
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQNW 410


>gi|170070084|ref|XP_001869460.1| peptide chain release factor 1 [Culex quinquefasciatus]
 gi|167866004|gb|EDS29387.1| peptide chain release factor 1 [Culex quinquefasciatus]
          Length = 425

 Score =  205 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 104/302 (34%), Positives = 166/302 (54%), Gaps = 8/302 (2%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQ 103
           ++    L + +   ++ +  + +   L E+  E  ED   +++E  +    I  +++ + 
Sbjct: 95  IKRMALLSHVVEMYEQRRIIVDNLSSLAEMGAEKDEDMLQLMKEEKEAYTNILRKLDGEI 154

Query: 104 FESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            + +LS   E D +   LEV AG GG E+  +A  +  MY  + E + ++ E L+  D E
Sbjct: 155 MDGILSMDEEEDYSSLILEVAAGVGGQEAMLFAREVFDMYCGFVEFKGWEIEMLQTEDTE 214

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             GI+ A+++I G +AY +LK E GVHR+ RI   + ++R HTS +++ V P   D  +I
Sbjct: 215 LGGIRHASMVINGRDAYRFLKFEAGVHRVQRIPSTEKSARIHTSTATVSVLPRP-DEFQI 273

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ + D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A   L 
Sbjct: 274 ELKDKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGMAVECQTERSQGKNKEIAKQKLL 333

Query: 282 AKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVL 339
           AKL + EL+ +     ++ +S         +IR+Y   P   + D R       +    +
Sbjct: 334 AKLTQQELESKFNAKQSLKKSQVGSSTRNEKIRTYNY-PQDRITDHRLEGGTTHNLKVFM 392

Query: 340 DG 341
           +G
Sbjct: 393 EG 394


>gi|241954572|ref|XP_002420007.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223643348|emb|CAX42223.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 392

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 147/341 (43%), Gaps = 31/341 (9%)

Query: 40  IEAKMLMRERQHLDNAI------------SFIKEIQDRLCDNLIL----LELALEEDDCS 83
             A+ + +E + L   +                 I         L    +EL    DD  
Sbjct: 50  ERAQTIQQEHKELSEKLADKYIPDLQVKFDNYTNILSMFGKLETLTQEYIELTEITDDPG 109

Query: 84  ILQETSDNLQ-----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           + +E  + L+     +I+  V     +     +       +E+  G GG E+  +   LL
Sbjct: 110 LYKEAQEELKSIVIPQIEKLVSELTVKLRPPVKYADKGCIIELRPGVGGNEASLFTGDLL 169

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY  +A +  +K + +         I  A L I    +Y  ++ E GVHR+ RI   ++
Sbjct: 170 NMYINFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRIPETET 229

Query: 199 NSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
             R HTS S++ V P + +         E   +  + RIDT RA G GGQHVNTTDSAVR
Sbjct: 230 KGRVHTSTSAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTTDSAVR 289

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310
           + HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++       +     +      
Sbjct: 290 LVHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEILRQKKLRTDQVSSTDRSD 349

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
           +I++Y  +    V D R N        VL+G  L   +   
Sbjct: 350 KIKTYNYKE-NRVTDHRINYSMHDLQGVLEGRKLGQLIDTY 389


>gi|310796023|gb|EFQ31484.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
          Length = 397

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 155/338 (45%), Gaps = 34/338 (10%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV---- 99
              R    L + ++ ++E +        L  L     D  +    ++ L+  + ++    
Sbjct: 36  KTARRLGELSSVVTALREWEQATSSVAELNGLLG-SKDKELRDMAAEELESTRDQLAAVS 94

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                              LE+  G GG E + +A+ L RMY ++  ++ ++ E ++   
Sbjct: 95  RRLSASLTPKDPYAHMPCLLEIRPGPGGLEGRFFADTLFRMYKQYCSRKGYRAEVIKYET 154

Query: 160 GEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            + AG          ++ A + I  P AY   +GE G+HR+ RI   + N R HTS  ++
Sbjct: 155 ADAAGDQSTAAGESPLQEAIVEIHDPGAYDLFRGEAGMHRVQRIPATEKNGRVHTSAVAV 214

Query: 210 WVYPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           WV P   +S              +  I  ++ +I+T RA GAGGQHVN T+SA+R+TH+P
Sbjct: 215 WVLPSFQESGGEGGAQDMDNPESDFYIDPAEVKIETMRARGAGGQHVNKTESAIRMTHVP 274

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES---SKTEIGWGRQIR 313
           TG VV  Q  RSQ +N+  AW ++R+++  +  + REE A        S+  I    +IR
Sbjct: 275 TGTVVSMQDSRSQSRNREDAWKLMRSRVALIRREAREEAAAQLRDSVLSQHRISRSDKIR 334

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
           +Y       V D R  ++  +  DV++G   LD  + A
Sbjct: 335 TYNYN-QDRVTDHRAGLDVYNLDDVINGGESLDKIVDA 371


>gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor
           [Cryptococcus gattii WM276]
 gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 476

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 159/346 (45%), Gaps = 25/346 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +++     K  D  +   +  A+ + +E   L    +   E++  + D    LE    + 
Sbjct: 113 KKVMENEAKATDIDVKGQIERAR-VQKELAPLLEVWNRYLELKQSIIDMKPFLE----DS 167

Query: 81  DCSILQETSDNLQRIKLEVEYKQFES-----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           D ++ +        +  E++     +     L      S  A + ++AG GG ES     
Sbjct: 168 DPTLREMFETEHASLCTELDTLIISTFPTVLLPPSSTASLPAVMSLNAGVGGLESALCTE 227

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----------KGPNAYGWLKGE 184
            L RMY R+A  R +K E +   +G           +           +G   YG L+ E
Sbjct: 228 DLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGTEVYGALQWE 287

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHV 243
           +GVHR+ R+   ++  R HTS  ++ V P+  D+ E   +   D RID  RA GAGGQHV
Sbjct: 288 KGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHV 347

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVR+THIPTG+ V  Q  RSQH+N+A AW +LRA+L E +  +  E        +
Sbjct: 348 NRTESAVRLTHIPTGITVSMQDSRSQHQNRAWAWEILRARLSEKKHNEEVEARRASRRDQ 407

Query: 304 TE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
            +      +IR+Y       + D R  I  T    VLDG+ L+D +
Sbjct: 408 VKGADRSDKIRTYNFN-QDRLTDHRFGITVTGLQRVLDGEGLEDVI 452


>gi|39961534|ref|XP_364694.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
 gi|145011042|gb|EDJ95698.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
          Length = 425

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 170/368 (46%), Gaps = 40/368 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N       L+T+ E  +   +  +AK +  E   + +A+      Q  + +   L     
Sbjct: 36  NLTDEHDQLHTELEA-NF--DSTKAKRMG-EISKVADALKAWDAAQASINELTGL----S 87

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  D  + +   + L+    E+    +  +               +E   G GG E + +
Sbjct: 88  KSQDEEMRELAKEELETTNNELGTLSDKIKIALTPKHPFADMPCLIEFRPGPGGMEGRLF 147

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGE-------EAGIKSATLLIKGPNAYGWLKGEQG 186
            + L +MY  +   + ++T+ +     +       E  ++ A L +  P +Y   +GE G
Sbjct: 148 TDALFKMYQSYCTFKGYRTKTVTYERVDGPPGADGETPLQEAILEVINPGSYDIFRGEAG 207

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDD---------------SIEIEISESDCRID 231
           +HR+ R+   + + R HTS +++WV P   +               + +  I  ++ R++
Sbjct: 208 MHRVQRVPATEKSGRIHTSAAAVWVLPSFPEEAGASDEGTTDVNDPNSDFYIDPTEVRVE 267

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+R+TH+PTG +V  Q ERSQ +N+  AW +LR+++ +   ++
Sbjct: 268 TMRARGAGGQHVNKTESAIRLTHMPTGTMVSMQDERSQQRNREAAWKVLRSRIAQKRREQ 327

Query: 292 REEIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDF 346
           REE+A    S   SK +I  G +IR+Y     +   D R+ ++  +   V+ G  +LD  
Sbjct: 328 REEMAQNLRSSVLSKDKITRGEKIRTYNY-VQKRCTDHRSGLDIHNLPGVMMGGPELDRI 386

Query: 347 MKATLAIK 354
           + +    +
Sbjct: 387 IASVHEWQ 394


>gi|114651377|ref|XP_001150094.1| PREDICTED: mitochondrial translational release factor 1 isoform 2
           [Pan troglodytes]
          Length = 487

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 110/295 (37%), Positives = 150/295 (50%), Gaps = 22/295 (7%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAG- 124
            D   L ELALEE      Q     +  +  E+    F+SL+  E  D ND  LEV AG 
Sbjct: 185 QDEKQLQELALEE-----RQTIDQKINMLYNEL----FQSLVPKEKYDKNDVILEVTAGR 235

Query: 125 -AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
             GG   Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK 
Sbjct: 236 TTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKY 295

Query: 184 EQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           E G+HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGG
Sbjct: 296 EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGG 354

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANI 298
           QHVN TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +  
Sbjct: 355 QHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSAR 414

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
                T      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 415 KLQVGTRAQ-SERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 467


>gi|299469865|emb|CBN76719.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 364

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 176/346 (50%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   +        +   V E   + +E   L+  +    +++++  +   L E+
Sbjct: 5   LEHMKGRHEEIVESMTKGEV--PVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLEEV 62

Query: 76  ALE------EDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
                    E D  +     +E +D    ++          L   E DS +A LEV +G+
Sbjct: 63  MQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRSGS 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L  MY R+AE + +K E +     +  G + A+  I+G + YG LK E 
Sbjct: 123 GGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKFEN 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+    ++ R HTS +S+ V     + +++++ +SD R + +RASGAGGQHVNT
Sbjct: 183 GVHRVQRVP--SNSPRLHTSAASVVVMMEA-EEMDLKLEQSDLRFEAFRASGAGGQHVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKT 304
           T+SAVRITH+PTG+    Q ERSQH NK +A  +LR++++E+   +   + A +  S+  
Sbjct: 240 TESAVRITHVPTGITASIQDERSQHSNKEKALKVLRSRVFEVRRDEIARKEAAVRASAVG 299

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
                 +IR+Y   P   + D R N  +     ++ G+ L DF++A
Sbjct: 300 SGDRSERIRTYNF-PQDRITDHRANYSRHGWEAMMRGEMLGDFLEA 344


>gi|296804966|ref|XP_002843310.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
 gi|238845912|gb|EEQ35574.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
          Length = 438

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 149/341 (43%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNL----QRIKL 97
           +   R    L    + +K+          L  L  E   D  +     D++      +  
Sbjct: 71  RAAARRLGELAPVANALKDWDRANESITELQGLINEPSTDAELKSLAQDDITSTIATLSS 130

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMY  +   R  +T  ++ 
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYMAFCSSRGLRTAIIKK 190

Query: 158 HDGEEAGI------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G         A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 ETEDGVGAGAEERLSEAVMEIETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P   D+              +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPDNNQGDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  M++    
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQNW 410


>gi|119629057|gb|EAX08652.1| mitochondrial translational release factor 1, isoform CRA_c [Homo
           sapiens]
          Length = 487

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 110/295 (37%), Positives = 150/295 (50%), Gaps = 22/295 (7%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAG- 124
            D   L ELALEE      Q     +  +  E+    F+SL+  E  D ND  LEV AG 
Sbjct: 185 QDEKQLQELALEE-----RQTIDQKINMLYNEL----FQSLVPKEKYDKNDVILEVTAGR 235

Query: 125 -AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
             GG   Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK 
Sbjct: 236 TTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKY 295

Query: 184 EQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           E G+HR+ RI     +SR    HT   S+ V P   D +++++   D RIDT+RA GAGG
Sbjct: 296 EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKLDPKDLRIDTFRAKGAGG 354

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANI 298
           QHVN TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  +E  KR++ +  
Sbjct: 355 QHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSAR 414

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
                T      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 415 KLQVGTRAQ-SERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 467


>gi|149192359|ref|ZP_01870562.1| peptide chain release factor 1 [Vibrio shilonii AK1]
 gi|148833798|gb|EDL50832.1| peptide chain release factor 1 [Vibrio shilonii AK1]
          Length = 229

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 89/217 (41%), Positives = 133/217 (61%), Gaps = 6/217 (2%)

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+++AEK+ ++ E +  ++ E+ G K     + G  AYG LK E G HR+ R+   +
Sbjct: 1   FRMYSKYAEKKGWRIEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATE 60

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PT
Sbjct: 61  SQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPT 120

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G VV+CQ ERSQHKNKA+A ++L A    +  ++ +  A + ++ +  +G G    +IR+
Sbjct: 121 GTVVECQDERSQHKNKAKAMSVLAA--RIIAAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 178

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   V D R N+     S+V++GDL   +   L
Sbjct: 179 YNY-PQGRVSDHRINLTLYRLSEVMEGDLQSLVDPVL 214


>gi|302653122|ref|XP_003018392.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
 gi|291182035|gb|EFE37747.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
          Length = 438

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQR----IKL 97
           +   +    +    + +K+          L  L  E   D  +     D++      +  
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAGI------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G           + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P   ++              +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  +++  + 
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQSW 410


>gi|330951103|gb|EGH51363.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 243

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 5/236 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  K ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           R+   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TD
Sbjct: 188 RVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTD 243


>gi|145485050|ref|XP_001428534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395620|emb|CAK61136.1| unnamed protein product [Paramecium tetraurelia]
          Length = 390

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 113/361 (31%), Positives = 180/361 (49%), Gaps = 19/361 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISF 58
           + S  LN +          QRL  LNT+ E   D  +  ++ E K   R    L   I  
Sbjct: 15  QFSNTLNNISKTLYL--INQRLGELNTEYETYQDQTIKGDMNEIKR--RRMNELQPKIHI 70

Query: 59  IKEIQDR---LCDNLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADS 114
            K+IQ     + D   L+ +    D+ S+L +E    ++ +K   +    + +   E D 
Sbjct: 71  YKQIQASVSVIEDAKQLIGMGGSSDEISMLNEEIQSQIEYLKKYQDDALSQLIEEDEYDH 130

Query: 115 -NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE--AGIKSATLL 171
                +EV AG GG+E   +A  ++ M   +A  + +    + I    +   G K+  L 
Sbjct: 131 IRQLNVEVRAGVGGSEGSLFAEDIIGMIQNYASLQNWDCRVISIQKDNQIGKGCKTGILQ 190

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G N Y  LK E GVH+++R+   ++  R H+S +S+ V P V DS    +S+ D R +
Sbjct: 191 INGENVYQHLKCESGVHKVIRVPETEAKGRLHSSTASMIVLPKVTDSFH--LSDKDLRYE 248

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQ 290
             RASG GGQHVN T+SA RITH+PTG+ V   ++RSQ +NK +A+ +LR KL+ +   +
Sbjct: 249 YMRASGPGGQHVNKTESACRITHVPTGIQVVNMEDRSQERNKQRAYQILRDKLFAIHVQE 308

Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           K+E +A   +S  T      +IR+Y   P + + D RTN+       +L G+ L +F++ 
Sbjct: 309 KQERMAQTRKSQVTGSDRSDKIRTYNF-PQERITDHRTNLTLYGMEKMLSGELLGEFIQK 367

Query: 350 T 350
            
Sbjct: 368 Y 368


>gi|23335364|ref|ZP_00120601.1| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 240

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/223 (34%), Positives = 119/223 (53%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I 
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIP 234


>gi|145627802|ref|ZP_01783603.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979577|gb|EDJ89236.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 183

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 113/182 (62%), Positives = 141/182 (77%), Gaps = 1/182 (0%)

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID
Sbjct: 1   MSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRID 60

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK
Sbjct: 61  VYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQK 120

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 121 KNADKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASL 179

Query: 352 AI 353
             
Sbjct: 180 KA 181


>gi|218459801|ref|ZP_03499892.1| peptide chain release factor 1 [Rhizobium etli Kim 5]
          Length = 230

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/221 (39%), Positives = 132/221 (59%), Gaps = 8/221 (3%)

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ R+ 
Sbjct: 1   GDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVP 60

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 61  ETEAGGRIHTSAATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITH 119

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV    E+SQH+N+A+A  +LR++LY+ E   +   +      K+++G G    +
Sbjct: 120 LPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDRSER 176

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 177 IRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 216


>gi|297739884|emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 168/340 (49%), Gaps = 7/340 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + +  R   +  K    +LW +V ++  ++ +       +  +K++  +  +  ++ +L 
Sbjct: 75  EASRIRQEEMIRKY---NLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLV 131

Query: 77  L-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             +  +  + ++  +    +   +   +   LL G+ D   A L + AG  G  S+ WA 
Sbjct: 132 EMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAE 191

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LL MYT+WAEK+ +K   +E +  +  GIKSAT+  +    YG+L GE+GVH ++R S 
Sbjct: 192 QLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSD 251

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S      S     +   ++ + +++I + D RI +    G        T  AV I HI
Sbjct: 252 DESILHETGSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGV---EQGRTGHAVCIQHI 308

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+ VQ   ERS   NK +A N L+AKL    +++        +       W ++ R Y
Sbjct: 309 PTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQETRRY 368

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           V  P ++V+D++T+I+    + VLDG+++  + A +++++
Sbjct: 369 VFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 408


>gi|326470521|gb|EGD94530.1| peptide chain release factor 1 [Trichophyton tonsurans CBS 112818]
          Length = 438

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQR----IKL 97
           +   +    +    + +K+          L  L  E   D  +     D++      +  
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
             +  +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAGI------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G           + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P   ++              +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  +++    
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQNW 410


>gi|302496498|ref|XP_003010250.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
 gi|291173792|gb|EFE29610.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
          Length = 438

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQR----IKL 97
           +   +    +    + +K+          L  L  E   D  +     D++      +  
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAGI------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G           + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P   +S              +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  M++  + 
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQSW 410


>gi|225441347|ref|XP_002274658.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 417

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 168/340 (49%), Gaps = 7/340 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + +  R   +  K    +LW +V ++  ++ +       +  +K++  +  +  ++ +L 
Sbjct: 78  EASRIRQEEMIRKY---NLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLV 134

Query: 77  L-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             +  +  + ++  +    +   +   +   LL G+ D   A L + AG  G  S+ WA 
Sbjct: 135 EMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAE 194

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LL MYT+WAEK+ +K   +E +  +  GIKSAT+  +    YG+L GE+GVH ++R S 
Sbjct: 195 QLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSD 254

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S      S     +   ++ + +++I + D RI +    G        T  AV I HI
Sbjct: 255 DESILHETGSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGV---EQGRTGHAVCIQHI 311

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+ VQ   ERS   NK +A N L+AKL    +++        +       W ++ R Y
Sbjct: 312 PTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQETRRY 371

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           V  P ++V+D++T+I+    + VLDG+++  + A +++++
Sbjct: 372 VFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 411


>gi|327306561|ref|XP_003237972.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
 gi|326460970|gb|EGD86423.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
          Length = 438

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 87/341 (25%), Positives = 151/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQR----IKL 97
           +   +    +    + +K+          L  L  E   D  +     D++      +  
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAGI------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G           + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P   ++              +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  M++  + 
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQSW 410


>gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 480

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 160/346 (46%), Gaps = 25/346 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++++    K  D  +   +  A+ + +E   L    +   E++  + +    LE    + 
Sbjct: 117 KKVTEDEAKATDIDIKSQIERAR-VQKELAPLVEVWNKYLELKQSIIEIKPFLE----DS 171

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESL---LSGEAD--SNDAYLEVHAGAGGTESQDWAN 135
           D ++ Q        +  E++     +L   L       +  A + ++AG GG ES     
Sbjct: 172 DPTLRQMFEAEHASLGTELDALITSTLPIVLLPPLSTAALPAVMSLNAGVGGLESALCTE 231

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----------KGPNAYGWLKGE 184
            L RMY R+A  R +K E +   +G           +           +G   YG L+ E
Sbjct: 232 DLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGIEVYGALQWE 291

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHV 243
           +GVHR+ R+   ++  R HTS  ++ V P+  D+ E   +   D RID  RA GAGGQHV
Sbjct: 292 KGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHV 351

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVR+THIPTG+ V  Q  RSQH+N+  AW +LRA+L E +  +  E        +
Sbjct: 352 NRTESAVRLTHIPTGITVSMQDSRSQHQNRTWAWEILRARLSEKKHNEEVEARRASRRDQ 411

Query: 304 TE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
            +      +IR+Y       + D R  I  T    VLDG+ L+D +
Sbjct: 412 VKGADRSDKIRTYNFN-QDRLTDHRFGITVTGLQHVLDGEGLEDVI 456


>gi|323337560|gb|EGA78805.1| Mrf1p [Saccharomyces cerevisiae Vin13]
 gi|323348703|gb|EGA82945.1| Mrf1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 303

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 100/283 (35%), Positives = 142/283 (50%), Gaps = 15/283 (5%)

Query: 81  DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D S+  E       +  + E        + L         + LE+  G GG E+  +   
Sbjct: 5   DPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFTQN 64

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL MY  +A  RK+K   +  ++ E   GI  A L I+   +Y  L+ E GVHR+ RI  
Sbjct: 65  LLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRIPS 124

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEIS-------ESDCRIDTYRASGAGGQHVNTTDS 248
            ++  R HTS +++ V P + D     I          + R+D  RASG GGQHVNTTDS
Sbjct: 125 TETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTTDS 184

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT-EIG 307
           AVR+THIP+G+VV  Q ERSQHKNKA+A+ +LRA+L E E  ++EE       S+     
Sbjct: 185 AVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEKEEKERKARKSQVSSTN 244

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
              +IR+Y   P   + D R          VL G+ LD+ ++A
Sbjct: 245 RSDKIRTYNF-PQNRITDHRCGFTLLDLPGVLSGERLDEVIEA 286


>gi|321479100|gb|EFX90056.1| hypothetical protein DAPPUDRAFT_299896 [Daphnia pulex]
          Length = 417

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 92/289 (31%), Positives = 156/289 (53%), Gaps = 12/289 (4%)

Query: 61  EIQDRLCDNLILLELALEEDD----CSILQETSDNLQRIKLEVEYKQFESLLSGEADS-N 115
           ++     D   L  L+ ++D       ++ E    L++I ++++ +  E +L  +     
Sbjct: 104 KLLQTENDLQELKALSADDDKNGDLAKMVSEEFSQLKQILVQIQNEVLELILQEDNHQTE 163

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
              +E  AG GG ES  + N +L+MY  + E   +  E  +I   +  GI+ A + I   
Sbjct: 164 GIIMEFSAGVGGQESMLFCNEILQMYITYCESEGWDYELTDIEKSDLEGIRHAAICINNS 223

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           +AY  L+ E GVHR+ R+   +   R HTS  ++ + P   + + + I + D +I+T RA
Sbjct: 224 DAYDRLQFESGVHRVQRVPKTEKAGRVHTSTVAVAILPRPSE-VTVNIEQKDLKIETKRA 282

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRI HIP+GVV +CQ +RSQ +N+  A + +RA+L+++++   +++
Sbjct: 283 SGAGGQHVNTTESAVRIVHIPSGVVAECQTQRSQMQNRKVAIDKIRARLFQMKID--QQL 340

Query: 296 ANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           A    S K ++   G   +IR+Y   P   + D R N    +  + L G
Sbjct: 341 ATTRSSRKLQVGSSGRSEKIRTYNF-PQDRITDHRINFTSHNLGEFLRG 388


>gi|300176358|emb|CBK23669.2| unnamed protein product [Blastocystis hominis]
          Length = 244

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 97/220 (44%), Positives = 140/220 (63%), Gaps = 2/220 (0%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLL MYT +A+K  +K + +   D +     S+ L ++G +   +L  E GVHRLVRISP
Sbjct: 1   MLLAMYTSFAQKMNWKCKLISKLD-DGDSCHSSILKLEGDDLASYLSLESGVHRLVRISP 59

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D N RRHTSF+S+ V PV + +  + I  ++ +ID +R+SG GGQHVN T+SAVR+TH+
Sbjct: 60  FDKNQRRHTSFASVSVSPVPEAASSLRILPTELQIDRFRSSGPGGQHVNKTESAVRVTHL 119

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           P+G+V +CQ ER+QH+N   A  M+++KL   E +K  E      + K    W  QIRSY
Sbjct: 120 PSGIVAECQAERNQHQNLEIAMEMVKSKLLLREAEKEAEKKQEDHARKDVNAWSSQIRSY 179

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           VL PY+MVKD R  +E+     +L GDL  F++  +A +K
Sbjct: 180 VLHPYKMVKDHRFGVEEGDVEKILGGDLKGFVEE-IARRK 218


>gi|213026460|ref|ZP_03340907.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 201

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 83/200 (41%), Positives = 121/200 (60%), Gaps = 2/200 (1%)

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R+++ E + + +GE  G K     I G   YG LK E G HR+ R+   +S  R HTS
Sbjct: 1   EARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 60

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ 
Sbjct: 61  ACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVK 324
           ERSQHKNKA+A ++L A+++  E  KR++       +    G    + R+Y   P   V 
Sbjct: 121 ERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVT 179

Query: 325 DLRTNIEKTSPSDVLDGDLD 344
           D R N+      + ++G LD
Sbjct: 180 DHRINLTLYRLDETMEGKLD 199


>gi|195031191|ref|XP_001988305.1| GH11092 [Drosophila grimshawi]
 gi|193904305|gb|EDW03172.1| GH11092 [Drosophila grimshawi]
          Length = 395

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 9/304 (2%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYK 102
           L      LD  ++ +++ +    +     ELA E  ED  +++QE ++    +  + E  
Sbjct: 55  LYERLSRLDPVVNSLEKHRALQRNITPKQELAAEKDEDMRALMQEENNVYADLLRKQEED 114

Query: 103 QFESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             + LL+     D      EV AGAGG E+  +A  L  MYT + E   ++ E       
Sbjct: 115 MLQELLTLADNVDYPALIFEVKAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEEFAYETT 174

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           +  G++ A LL+  P AY WL+ E GVHR+ R+   + + R HTS +SI V P   D + 
Sbjct: 175 DIGGLRHANLLVSDPEAYNWLRYEAGVHRVQRVPTTEKSGRMHTSTASITVIPRPAD-VH 233

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + +++ D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  A   L
Sbjct: 234 VHLTDRDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVECQSERSQLKNRELALKRL 293

Query: 281 RAKLYELELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRT--NIEKTSPSD 337
           +AKL + +L+  E        S+   +    +IR+Y       V D R        + S 
Sbjct: 294 QAKLMQQQLESAEASKQATRKSQQGNLNRNEKIRTYNFM-QDRVTDHRVQQGGTLHNLSG 352

Query: 338 VLDG 341
            L G
Sbjct: 353 FLAG 356


>gi|193613150|ref|XP_001944471.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 400

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 11/294 (3%)

Query: 54  NAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQR----IKLEVEYKQFESLL 108
             +S I+ ++    D   L E  +E E D    ++     +     + L         + 
Sbjct: 81  ALVSAIRSLK---VDLQSLDEFEIEKEKDEEFGEQLQKEKKSHEEQLTLLELELLNSLVP 137

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           +   D  D  LE+ AG GG E+  +   L  MY  +A  + +K+E  +    E  GI+ A
Sbjct: 138 NENFDCEDVMLEITAGVGGQEAMIFTQELFEMYNSFAHYKGWKSEVADYCHTEMGGIRHA 197

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
            L++ G + Y  L+ E GVHR+ R+   + + R HTS  ++ + P   + +++ I++ D 
Sbjct: 198 CLMLSGTDCYSLLQHEGGVHRVQRVPKTEKSGRIHTSTVTVAILPQPTE-LDVVINDRDL 256

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            I+T RASGAGGQHVN TDSA+R+ H PTGV+V+CQ +RSQ KN+  A   LRA +Y+ +
Sbjct: 257 VIETKRASGAGGQHVNKTDSAIRMHHKPTGVIVECQTDRSQIKNRKIALQKLRAIIYKKQ 316

Query: 289 LQKREEI-ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           L++++ +  +  +          +IR+Y       + D R      +    L+G
Sbjct: 317 LEQQQSLTRSARKQQVGSSARSEKIRTYNFN-QDRITDHRLTKSFHNLVGFLEG 369


>gi|149237364|ref|XP_001524559.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452094|gb|EDK46350.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 392

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 18/307 (5%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSG 110
            +    E    L +   L  +     D  ++ E  + LQ +  +    +E    + L   
Sbjct: 70  VLKTYDEFSRILLEIRELSTI----RDPDLISEAQEELQELVPKYTSIIEELNNKLLPPV 125

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           +       +E+  G GG E+  + + L++MY  +A  + +    +         +    L
Sbjct: 126 KYAECGCMIELRPGVGGNEASLFTDDLMQMYLNFASIQSWPALVISRSTNSSGFVNEIIL 185

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEI 223
            I  P AY  L+ E GVHR+ RI   ++  R HTS S++ + P + D       + E++ 
Sbjct: 186 SINQPGAYDVLRHESGVHRVQRIPETENKGRVHTSTSAVIILPKMSDGNENSLRADEMQF 245

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
              + RIDT RA G GGQHVNTTDSAVR+ HIPTG++V  Q ERSQ +NKA+A+ +LRA+
Sbjct: 246 KPGEVRIDTMRAGGKGGQHVNTTDSAVRLVHIPTGIMVMQQDERSQPQNKAKAFAILRAR 305

Query: 284 LYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           L E E  +       +  S  +      +IR+Y   P   V D R        +  + G+
Sbjct: 306 LAEKERVEELNRQRQMRTSQVSSTDRSDKIRTYNY-PQNRVTDHRCGFSLHDIAGCMGGN 364

Query: 343 -LDDFMK 348
            L++ + 
Sbjct: 365 KLNEIID 371


>gi|296203802|ref|XP_002749048.1| PREDICTED: peptide chain release factor 1, mitochondrial
           [Callithrix jacchus]
          Length = 488

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 106/296 (35%), Positives = 151/296 (51%), Gaps = 24/296 (8%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAG- 124
            D   L ELALEE      Q     +  +  E+    F+SL+  E  D ND  LEV +G 
Sbjct: 186 QDEKQLQELALEE-----RQTLVQKINMLYSEL----FQSLVPKEKYDKNDVILEVTSGK 236

Query: 125 -AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
             GG   Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK 
Sbjct: 237 TTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKY 296

Query: 184 EQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           E G+HR+ RI     +SR    HT   S+ + P   D +++++   D RIDT+RA GAGG
Sbjct: 297 EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIILPQP-DEVDVKLDPKDLRIDTFRARGAGG 355

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVR+ HIPTG+VV+CQQERSQ +NK  A ++LRA+LY  +    +       
Sbjct: 356 QHVNTTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLY--QQIIEKNKCQQHS 413

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           + K ++G G    +IR+Y       V D R   E     + + G   LD  ++  L
Sbjct: 414 TRKLQVGTGAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFVCGGKALDQLIQRLL 468


>gi|323452428|gb|EGB08302.1| hypothetical protein AURANDRAFT_13671 [Aureococcus anophagefferens]
          Length = 235

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 97/233 (41%), Positives = 140/233 (60%), Gaps = 7/233 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E+ ++G  D  D  LE+ AGAGG ++Q+W  M+ RMY R+ EKR F     E  +G+ 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 163 AGIKS-ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS--- 218
            G     +L I+G NA+G  +GE+G HRLVR SP++S ++R TSF+S+   P + D    
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 219 ---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                 E+  +D  + T RA GAGGQ+VN  ++AVR+TH+PTG+ V+C +ER+Q  NKA 
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRVTHVPTGLRVRCARERTQGANKAI 180

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           A  MLRAKL     ++R          +    +G  +RSYVL PY++VKD R 
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVAADFGASVRSYVLHPYKLVKDDRH 233


>gi|255945217|ref|XP_002563376.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588111|emb|CAP86182.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 423

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 150/339 (44%), Gaps = 31/339 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEV--- 99
              +    L    + +KE  +     + L  L  + + D  +    +++L+  +  +   
Sbjct: 67  KTAKRAGELAPVANILKEWVNANDSIVELNSLLTDPNTDAELRSLATEDLESSRDALPSI 126

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            +  +   +           LE+  GAGG E+  +A  +LRMY  +  +R  +   L+  
Sbjct: 127 SDRLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEMLRMYVAFCSRRGLRPTILK-Q 185

Query: 159 DGEEAGIK----SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           D E    +     A + I+   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P 
Sbjct: 186 DTEVGPSEDRLSEAVIEIQANGAYDILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPS 245

Query: 215 VDD--------------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
             +              S +  I   + R++  RA GAGGQHVN T+SA+R+THIPT  V
Sbjct: 246 FPEDTSEMDNALNFEDPSSDYYIDPQEVRVEKMRAGGAGGQHVNKTESAIRLTHIPTNTV 305

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYV 316
           V  Q ERSQ  N+ +AW +LRAKL E   + RE+              ++G G +IR+Y 
Sbjct: 306 VSMQDERSQQANRRKAWQVLRAKLAEARQEAREQELMQLRRGILGGVAKMGRGDKIRTYN 365

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                   D RT I   +   +LDG   L+  M +    
Sbjct: 366 FG-QSRCTDHRTGITIHNLDGILDGGDGLETVMDSVRTW 403


>gi|72071048|ref|XP_793802.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
 gi|115937039|ref|XP_001184371.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
          Length = 298

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 94/249 (37%), Positives = 136/249 (54%), Gaps = 5/249 (2%)

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            L S E D ND  +E  AG GG E+  +A  +  MY R+A  R +    LE    +  G+
Sbjct: 28  LLPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRFAAYRGWTFSVLEYFTTDMGGL 87

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           + A++ + G  AY  L+ E GVHR+ R+   +S  R HTS  +I V P   + I++++  
Sbjct: 88  RHASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQPKE-IDLKLDP 146

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R++T +ASGAGGQHVNTTDSAVRITH+PTG+  + QQERSQHKN+  A  ML+ ++Y
Sbjct: 147 KDLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRFIAMTMLQTRIY 206

Query: 286 ELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342
              L  +     +I  S     G   +IR+Y  Q    + D R         + L G   
Sbjct: 207 NRILADQTSSERSIRSSQVGTGGRSEKIRTYNYQ-QDRITDHRRGRTVHGVPEYLLGSEL 265

Query: 343 LDDFMKATL 351
           LD+ + + +
Sbjct: 266 LDEMVTSCV 274


>gi|295657325|ref|XP_002789232.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
 gi|226284000|gb|EEH39566.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
          Length = 438

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 98/353 (27%), Positives = 157/353 (44%), Gaps = 36/353 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     + L +K  +     N   AK +  E      A+    +  + + +   LLE + 
Sbjct: 51  SIADEHASLTSKLAE-SF--NPKTAKRVG-ELATTATALKEWDKAHESISELNALLEDS- 105

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  +     ++LQ     +    E  +   +           LE+  GAGG E+  +
Sbjct: 106 -STDSDLRSLALEDLQTTTASLSVLSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIF 164

Query: 134 ANMLLRMYTRWAEKRKFKT-------EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           AN LLRMYT +   R  +        E      G E  +  A + I+ P +Y  L+ E G
Sbjct: 165 ANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAG 224

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVD--------------DSIEIEISESDCRIDT 232
           VHR+ R+   +S  R HTS  S+ + P                  + +  I   +  ++ 
Sbjct: 225 VHRVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDPNSDFYIDPREVNVEK 284

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW +LRA++ +   + R
Sbjct: 285 MRASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQQRREAR 344

Query: 293 EEI----ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           EE              ++G G +IR+Y         D R+ +   +  D+++G
Sbjct: 345 EEEMVKLRRGAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLVDIMEG 396


>gi|255721217|ref|XP_002545543.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240136032|gb|EER35585.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 390

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 98/340 (28%), Positives = 155/340 (45%), Gaps = 30/340 (8%)

Query: 40  IEAKMLMRERQHLDNAI--SFIKEIQDRLCDNLILL--------------ELALEEDDCS 83
             A+ + +E + L   +   +I ++Q +  +   +L              EL    DD  
Sbjct: 49  ERAESIRKEHKELSEKLSNDYIPDLQVKYDNYTNILGLYDKLNTYRSEYQELVNITDDPD 108

Query: 84  ILQETSDNLQRIKLEVEYK--QFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLR 139
           + +E  + L+ I  EVE    Q    L            +E+  G GG E+  +   LL 
Sbjct: 109 LRKEAQEELETIAPEVEKLVSQLSVKLRPPVKYAEKGCMIELRPGVGGNEASLFTGDLLN 168

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY  +A +  +K++ +         +  A L I    +Y  ++ E GVHR+ RI   ++ 
Sbjct: 169 MYMGFASEMNWKSKIISEGRNASGFLNEAILCIDTLGSYDIMRHESGVHRVQRIPETETK 228

Query: 200 SRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            R HTS +++ V P + +         E   +  + RIDT RASG GGQHVNTTDSAVR+
Sbjct: 229 GRVHTSTAAVVVLPKLSEGNESSLKEDERVFAPGEVRIDTMRASGKGGQHVNTTDSAVRL 288

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQ 311
            HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++      N+     +      +
Sbjct: 289 VHIPTGMIVYQQDERSQPMNKAKAFAVLRSRLAQKEQEEEMIRQKNLRLDQVSSTDRSDK 348

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
           I++Y  +    V D R N        VL G  L   +   
Sbjct: 349 IKTYNFKE-NRVTDHRVNYSMHDLQGVLSGRKLGQLIDVY 387


>gi|327357433|gb|EGE86290.1| peptide chain release factor 1 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 438

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 33/338 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVE-- 100
              +    L      +K+ +D       L  L  +   D  +     ++LQ     +   
Sbjct: 70  KTAKRAGELATTARALKKWEDANETIAELNNLLKDPSTDSELHSLALEDLQSTTTSLAIL 129

Query: 101 --YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT------ 152
               +   +           LE+  GAGG E+  +AN LLRMYT +   R          
Sbjct: 130 STNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMFCSNRGLHVTLLKKE 189

Query: 153 -EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E      G E  +  A + I+ P +Y  L+ E GVHR+ R+   +S  R HTS  S+ +
Sbjct: 190 SENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVI 249

Query: 212 YPVVDDS--------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            P   ++               +  I   +  ++  RA GAGGQHVN T+SA+R+THIPT
Sbjct: 250 LPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPT 309

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIR 313
           G+VV  Q  RSQH+N+ +AW++LRA++ +   + REE              ++G G +IR
Sbjct: 310 GIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGAMGGVGKMGRGDKIR 369

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
           +Y         D R+     +   +++G   L+  M +
Sbjct: 370 TYNFG-QNRCTDHRSGFTVHNLGSIMEGGDGLEKIMDS 406


>gi|46117472|ref|XP_384754.1| hypothetical protein FG04578.1 [Gibberella zeae PH-1]
          Length = 445

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 30/340 (8%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--LQETSDNLQRI 95
           +   AK +  E   +  A+  +++ Q  + +   +L+ A  + D +     E S    ++
Sbjct: 79  DSTTAKRVG-ELSRVAEALKALEKSQTSVKELKQMLDDASLDQDLAAIARDELSSETGQL 137

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +                      LE   G GG E + + + L +MY     +R ++   +
Sbjct: 138 EALARKLSASLTPRHPFADFPCMLEFRPGPGGLEGRFFMDTLFKMYKGLCMRRGYRHTVV 197

Query: 156 EIHDGEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +    + AG          ++ A L +    A+   +GE G+HR+ RI   ++  R HTS
Sbjct: 198 KYEFADGAGDSSSSAGENPLQEAILEVHDQGAFDIFRGEAGMHRVQRIPSTETKGRVHTS 257

Query: 206 FSSIWVYPVVDDSI-----------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++WV P   ++            +  ++  + +I+T RA GAGGQHVN T+SA+R+TH
Sbjct: 258 AVAVWVLPSFPENSATSIDFEDPESDFYVNPQELKIETMRARGAGGQHVNKTESAIRMTH 317

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES---SKTEIGWGRQ 311
           +PTG  V  Q  RSQ +N+ +AW ++R+++ +   ++RE+ A+   +   SKT+I  G +
Sbjct: 318 LPTGTTVSMQDHRSQQRNREEAWKLMRSRIADQRREQREQEASQLRNSVLSKTQITRGDK 377

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
           IR+Y         D R  I+     +VL+G   LD  M  
Sbjct: 378 IRTYNYN-QDRCTDHRAGIDVHGLPNVLEGGEKLDKIMDG 416


>gi|261188569|ref|XP_002620699.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239593183|gb|EEQ75764.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239613247|gb|EEQ90234.1| peptide chain release factor 1 [Ajellomyces dermatitidis ER-3]
          Length = 438

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 33/338 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVE-- 100
              +    L      +K+ +D       L  L  +   D  +     ++LQ     +   
Sbjct: 70  KTAKRAGELATTARALKKWEDANETIAELNNLLKDPSTDSELHSLALEDLQSTTTSLAIL 129

Query: 101 --YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT------ 152
               +   +           LE+  GAGG E+  +AN LLRMYT +   R          
Sbjct: 130 STNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMFCSNRGLHVTLLKKE 189

Query: 153 -EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E      G E  +  A + I+ P +Y  L+ E GVHR+ R+   +S  R HTS  S+ +
Sbjct: 190 SENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVI 249

Query: 212 YPVVDDS--------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            P   ++               +  I   +  ++  RA GAGGQHVN T+SA+R+THIPT
Sbjct: 250 LPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPT 309

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIR 313
           G+VV  Q  RSQH+N+ +AW++LRA++ +   + REE              ++G G +IR
Sbjct: 310 GIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGAMGGVGKMGRGDKIR 369

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
           +Y         D R+     +   +++G   L+  M +
Sbjct: 370 TYNFG-QNRCTDHRSGFTVHNLGSIMEGGDGLEKIMDS 406


>gi|242814526|ref|XP_002486386.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218714725|gb|EED14148.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 427

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/337 (27%), Positives = 152/337 (45%), Gaps = 28/337 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV--- 99
            + +    L      +K+          L  L  + E D  +     ++L++ + ++   
Sbjct: 69  KVAKRMGELAPVAQAVKDWDKTHETITELNSLINDPETDSELRSLAIEDLEQTQTQLPIV 128

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-- 156
            E  +   +      +    LE+  GAGG E+  +A  LLRMY  +  ++  +T  ++  
Sbjct: 129 SEKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAYELLRMYQSFCSRKGLRTSIVKQD 188

Query: 157 -IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
                    +  A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P  
Sbjct: 189 MEESTSNDRVTEAVVEIETPGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPSF 248

Query: 216 DDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            +S              +  ++  + R +  RASGAGGQHVN T+SA+R+THIPTG+ V 
Sbjct: 249 PESGANEDNLNFEDPNSDYYVNPQEVRSEKMRASGAGGQHVNKTESAIRLTHIPTGLTVS 308

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQ 318
            Q  RSQH N+ +AW +LRAKL E   + RE    ++         ++G G ++R+Y   
Sbjct: 309 MQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKLRRGAMGGVAKMGRGDKVRTYNFS 368

Query: 319 PYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                 D R+ I       VLDG   L+  M +    
Sbjct: 369 -QSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTW 404


>gi|289678406|ref|ZP_06499296.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 219

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 90/210 (42%), Positives = 126/210 (60%), Gaps = 6/210 (2%)

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+R  + E L  ++GE  G K     ++G + YG LK E G HR+ R+   +S  R HTS
Sbjct: 1   ERRGGRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTS 60

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+
Sbjct: 61  ACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQE 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQHKN+A+A + L AKL + +         I    K  +G G    +IR+Y   P   
Sbjct: 121 ERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDRSERIRTYNF-PQGR 177

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           V D R N+   S  +VL G +D  ++  LA
Sbjct: 178 VTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 207


>gi|15806000|ref|NP_294700.1| peptide chain release factor 1 [Deinococcus radiodurans R1]
 gi|7388053|sp|P56905|RF1_DEIRA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|6458704|gb|AAF10553.1|AE001950_5 peptide chain release factor 1 [Deinococcus radiodurans R1]
          Length = 375

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 158/352 (44%), Gaps = 14/352 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     +  +  DP    +  E   L R  + L   ++ ++E +    D     EL
Sbjct: 7   LNELVSEFGLVERRLGDPQALADGREYARLTRRHRELLPLVTLVREREQAEADLSGAREL 66

Query: 76  -----ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTE 129
                  + D   + Q     LQ    E+E   +   L +   D  D  LE+ AGAGG E
Sbjct: 67  LQDPDMRDPDMKELAQLEVGGLQARLAEIEAELEVLLLPTDPDDGKDVILELRAGAGGAE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   LLRMY R+A     K   L+  + +  G       + G  A+  LK E+GVHR
Sbjct: 127 AGLFVMDLLRMYERYAAGLNLKLNVLDAAESDLGGASKVVAEVTGDFAFRALKWERGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   +  E+ +  S+ RID +R+ GAGGQ VNTTDSA
Sbjct: 187 VQRVPATESQGRIHTSTATVAVLPEA-EPGEVNLDLSEVRIDVFRSQGAGGQGVNTTDSA 245

Query: 250 VRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           VR  +    P  ++V CQ  RSQ KN+ +A  +L A+L E E   RE       +S+   
Sbjct: 246 VRAVYRAGTPDEIMVICQDGRSQIKNREKALQVLTARLAERERAAREAQERQERASQVGS 305

Query: 307 G-WGRQIRSYVLQPYQMVKDLRTNIE--KTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R   E        V+ G L   + A    ++
Sbjct: 306 GDRSEKIRTYNY-PQNRVTDHRLEGEDKNHPLDAVMAGGLAPVVSALARAQR 356


>gi|189191194|ref|XP_001931936.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973542|gb|EDU41041.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 321

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 26/298 (8%)

Query: 81  DCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +    SD+L+ I+ ++    +      +           LE+  GAGG+E+  +A  
Sbjct: 8   DPELRSLASDDLEEIRTQLVHASQSLITSLVPVHPFAHLPCLLEIRPGAGGSEAAIFAGD 67

Query: 137 LLRMYTRWAEKRKFKTEA---LEIHDGEEAGIK--SATLLIKGPNAYGWLKGEQGVHRLV 191
           L RMY  +  +  F+T       I+   EAG+    A + ++  NAYG  + E GVHR+ 
Sbjct: 68  LFRMYMAFCNRNGFRTNLLKYENINGTTEAGVPLSEAIMEVENENAYGVFRCEAGVHRVQ 127

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSI-----------EIEISESDCRIDTYRASGAGG 240
           R+   ++  R HTS +S+ V P + ++            +  I   + +++  RASGAGG
Sbjct: 128 RVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYYIDPKEVKLEVMRASGAGG 187

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVR+TH+PT  VV  Q  RSQHKNK +AW +LRA++ +   +KREE      
Sbjct: 188 QHVNKTESAVRLTHMPTNTVVAMQDSRSQHKNKEKAWALLRARIAQTRREKREEEMANMR 247

Query: 301 SSKT---EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353
            S      +G G ++R+Y     Q V D R+        DV+ G   L+  M++  + 
Sbjct: 248 RSVIGVARMGRGDKVRTYNWG-QQRVTDHRSGTTVHDLDDVMGGGQTLEKVMESVRSW 304


>gi|19113899|ref|NP_592987.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1172908|sp|Q09691|RF1M_SCHPO RecName: Full=Putative peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|1052800|emb|CAA90504.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe]
          Length = 396

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 14/328 (4%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +   AK + R  + + NA S  K + +++ D   L ++  +E D  +       +  I 
Sbjct: 64  NDTDLAKRIAR-LRRVHNAYSKFKSLSEQISD---LKQMEAQESDAEVKMMAVTEINEIS 119

Query: 97  ----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
                 +E  +   L   ++ +  A +E+  G GGTE+  +AN L+ MY ++A  + +  
Sbjct: 120 NKIPKSIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNC 179

Query: 153 EALEIHD-GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           + +          I  A   I+G  AYG L  E GVHR+ R    ++  R HTS +S+ V
Sbjct: 180 KFISKSAVQGLEAITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIV 239

Query: 212 YPVVDDSIEIEI-SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            P V +     +   S+ +I+  R+ GAGGQHVN T+SAVR+THIPTG+ V  Q  RSQH
Sbjct: 240 LPQVSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQH 299

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTN 329
           +NK +A+ +L ++L  L   K  E   +   ++ T      ++R+Y       V D R  
Sbjct: 300 QNKEKAFLVLNSRLAALNAAKENEAERLKRKNQVTSSDRSEKLRTYNFN-QNRVTDHRIG 358

Query: 330 IEKTSPSDVLDGD--LDDFMKATLAIKK 355
           +     S  + G+   D+F++      +
Sbjct: 359 LSMHDLSTFMQGEEKFDEFLEKIRIWNR 386


>gi|260792424|ref|XP_002591215.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
 gi|229276418|gb|EEN47226.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
          Length = 353

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 101/308 (32%), Positives = 162/308 (52%), Gaps = 11/308 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           E +H+   +  ++  Q  L +   LL   LE+ +  +        +  + ++++ + E L
Sbjct: 23  ELRHIVEKVQQVETTQKELVEVEKLLS-GLEDGETEMRDLALQEKEAYENDMKHLEDEIL 81

Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
                + EAD ND  LEV AG GG E+  + + +  MY ++A  + +  + L +      
Sbjct: 82  TLLVPADEADENDIILEVVAGVGGQEAMLFTSDMFEMYCQYAAYKNWHMQVLTMDTSTLG 141

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ AT  IKG NAY  LK E GVHR+ R+   +   R HTS  ++ V P   + I+   
Sbjct: 142 GLRHATASIKGLNAYKLLKLEAGVHRVQRVPKTEKAGRVHTSTMTVAVLPQPKE-IDNTW 200

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG-VVVQCQQERSQHKNKAQAWNMLRA 282
            +S+ +I+T +ASGAGGQHVN T+SAVRI HIPTG   V+CQQERSQ +N+A A   ++A
Sbjct: 201 DKSEFKIETKKASGAGGQHVNKTESAVRIVHIPTGENAVECQQERSQLRNRAIAMTTIQA 260

Query: 283 KLYELELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +LY+++L ++     +    +        +IR+Y       V D R  +   +  D L G
Sbjct: 261 RLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNF-TQDRVTDHRAGVNMFNLQDFLLG 319

Query: 342 D--LDDFM 347
              LD+ +
Sbjct: 320 GDRLDEMI 327


>gi|88607753|ref|YP_505069.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598816|gb|ABD44286.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 226

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 1/216 (0%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +  +AK L+ ER  +   ++  + ++    D   L E+  + DD   L   +  LQ +K
Sbjct: 3   DDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDRDFLATINAELQSLK 62

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEAL 155
           L +  K+ E + S EAD+N  +L + +GAGGTES DW  MLLRMYT+WAE   +F  E +
Sbjct: 63  LRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETV 122

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +  DGEE G+K+ T+ I G  AYGW + E G+HRLVRISP+D  ++RHTSF+S+ V PVV
Sbjct: 123 DSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVV 182

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           D  I+I+I E D RIDTYRASGAGGQHVN T+SAVR
Sbjct: 183 DHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVR 218


>gi|156546340|ref|XP_001606563.1| PREDICTED: similar to ENSANGP00000017484 [Nasonia vitripennis]
          Length = 402

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 100/292 (34%), Positives = 157/292 (53%), Gaps = 11/292 (3%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
                IK + + + ++  + +LA EE    +  E    L+ I  E+     +SL     D
Sbjct: 93  KIYENIKNLAELVEEDKDMKKLAEEE---KLSNEAR--LKEIDNELFSALAQSLSGDNFD 147

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
                LE+ AG GG E+  +   LL MY +      +  + +E+ +  + G + A+++I 
Sbjct: 148 E--IILEITAGVGGQEAMLFVKNLLEMYIKHLSYLGYSYDIIEMDESPQGGCRHASIMIS 205

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  ++  L+ E GVHR+ R+   + + R HTS  S+ V P  +D I++EI   D RIDT 
Sbjct: 206 GKESFEKLRHEAGVHRVQRVPATEKSGRIHTSVVSVGVLPQPND-IQVEIHAKDLRIDTM 264

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVNTT+SAVR+TH+PTG+ V+CQ +RSQ +N+  A   LRAK+YE +L ++ 
Sbjct: 265 RASGAGGQHVNTTNSAVRVTHLPTGMSVECQTDRSQIRNRELAMAKLRAKMYEQKLARQL 324

Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLR-TNIEKTSPSDVLDGDL 343
             A+     +  +G    +IR+Y       V D R +N    +    L+G +
Sbjct: 325 RSASEMRKQQMGMGERHEKIRTYNFN-QDRVTDHRLSNGTLHNLKGFLEGGM 375


>gi|171693921|ref|XP_001911885.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946909|emb|CAP73713.1| unnamed protein product [Podospora anserina S mat+]
          Length = 431

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 161/369 (43%), Gaps = 40/369 (10%)

Query: 12  GLFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            L D           L  +  D     N  E   + +    +       K+ +       
Sbjct: 38  ALLDRARFLTAEHDQLTAQLAD-----NFDE--KIAKRAGEVHRIAEAFKKFEHAKASLR 90

Query: 71  ILLELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            L E  L+ DD  + +   ++L    +++                       +EV  G G
Sbjct: 91  EL-EGLLKSDDAEMREMAQEDLAATNEQLAESSRNLSVALTPKHPFADMPCLIEVVPGPG 149

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEI----HDGEEAG-----IKSATLLIKGPNA 177
           GTE + +A+ + +MY  +   + F+T+ ++       GE+ G     ++ A L +    A
Sbjct: 150 GTEGRFFADSVFKMYQAYCANKGFRTKVVQYLAADSTGEKGGDGETALQEAVLEVMEEGA 209

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS------------IEIEISE 225
           Y   +GE G+HR+ R+   + + R HTS  ++WV P   ++             +  I  
Sbjct: 210 YAHFRGEAGMHRVQRVPATEKSGRTHTSAVAVWVLPSFAENATASDGDWDNPESDFYIDP 269

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++ + +  RASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQH N+A AW +LR+++ 
Sbjct: 270 AEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGITVSMQDSRSQHTNRADAWRLLRSRIA 329

Query: 286 ELELQKREEIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +   + REE A    S   S  ++  G +IR+Y         D R  ++  +  DVL G 
Sbjct: 330 QKRREAREEAARALRSSVLSSAQLTRGDKIRTYNYG-QDRCTDHRAGLDVHNLPDVLRGG 388

Query: 343 --LDDFMKA 349
             L   + A
Sbjct: 389 DTLGKVIDA 397


>gi|67526009|ref|XP_661066.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
 gi|40743816|gb|EAA63002.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
          Length = 367

 Score =  199 bits (505), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 25/324 (7%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEV--- 99
            + R    L        E  +       L  +  + D +  +     + LQ  + ++   
Sbjct: 38  KIARRAGELGPVAKAWAEWSNANESMSELHSMLEDPDTEAELRSIAVEELQTTEAKLTAI 97

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            +  +   +           LE+  GAGG E+  +A  LL+MY  +   +  ++  +++ 
Sbjct: 98  SDNLKRALVPRHPFADLSCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLE 157

Query: 159 DGEE--AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
            G+     +  A L ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P   
Sbjct: 158 RGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLPSFP 217

Query: 217 DS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           D+              +  I   + R +  RASGAGGQHVN T+SA+R+TH+PTG+VV  
Sbjct: 218 DTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSM 277

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVLQP 319
           Q  RSQH N+ +AW +LRAKL E   + RE+               +G G ++R+Y    
Sbjct: 278 QDSRSQHANRKKAWQILRAKLAEARQEAREQELVELRRGAMGGIGRMGRGDKVRTYNYG- 336

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDL 343
                D R+     +  +VL+G L
Sbjct: 337 QSRCTDHRSGFTVHNLDNVLEGVL 360


>gi|301347896|ref|ZP_07228637.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513180|ref|ZP_07238417.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597157|ref|ZP_07242165.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 239

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 1/234 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
               D    R   L     D  +  +    + L RE   L        + +    D    
Sbjct: 6   RLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + D   + +E     + +  E+E       +     DSN AYLE+ AG GG E+ 
Sbjct: 66  EMMKSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           R+   +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N 
Sbjct: 186 RVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINK 239


>gi|56808306|ref|ZP_00366070.1| COG1186: Protein chain release factor B [Streptococcus pyogenes M49
           591]
          Length = 214

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 90/216 (41%), Positives = 133/216 (61%), Gaps = 2/216 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P    + I A+   +E   L         +Q+   +  +LLE+   
Sbjct: 1   MEEEIALLENHMTEPDFXNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 59  DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT++
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFQ 214


>gi|212545056|ref|XP_002152682.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
 gi|210065651|gb|EEA19745.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
          Length = 421

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 28/337 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV--- 99
            + +    L      +K+          L  L  + E D  +     ++L + + ++   
Sbjct: 68  KVAKRLGELAPVAQAVKDWDKTHETITELNSLISDPETDSELRSLALEDLDQTQTQLPIV 127

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LE 156
            +  +   +      +    LE+  GAGG E+  +A  LLRMY  +  ++  +T     +
Sbjct: 128 SDKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAYELLRMYQNFCSRKGLRTSIVKQD 187

Query: 157 IHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           + +      +  A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P  
Sbjct: 188 MEEAISNDRLSEAVVEIETPGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPNF 247

Query: 216 DDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            +S              +  ++  + + +  RASGAGGQHVN T+SA+R+THIPTG+ V 
Sbjct: 248 PESGANEENLNFEDPNSDYYVNPQEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGLTVS 307

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQ 318
            Q  RSQH N+ +AW +LRAKL E   + RE    ++         ++G G ++R+Y   
Sbjct: 308 MQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKLRRGAMGGVAKMGRGDKVRTYNFS 367

Query: 319 PYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                 D R+ I       VLDG   L+  M +    
Sbjct: 368 -QSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTW 403


>gi|331242267|ref|XP_003333780.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312770|gb|EFP89361.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 416

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 27/320 (8%)

Query: 44  MLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-LEV 99
            ++++++ +     A+    E+    C+   + E   ++ D  + +     L+ I+   +
Sbjct: 69  EIIKKQKAIQPLKLAVEKYDELSSLACELKTISE---KDPDEDMREIAITELKTIEERAL 125

Query: 100 EYKQFESL-------LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
              +              E+    A +E+  G GG E+  +A +L+ +YTR A ++++  
Sbjct: 126 RTIEQVKQGLIQVASPRPESYDQSALVEIKPGVGGVEASHFATLLMNLYTRLATRKRWHI 185

Query: 153 EALEIHDGEEA----GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           + + +          G++ A L I+G   YG L+ E GVHR+ R+    + +  HTS +S
Sbjct: 186 KPVSVEYMTSGQGQDGLREAVLEIEGQAVYGSLRWEAGVHRVQRVPVMQNTASIHTSTAS 245

Query: 209 IWVYP------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           + V P        ++S ++   E D +++T R+ GAGGQHVN T+SAVR+THIPTG VV 
Sbjct: 246 VIVLPLNPSGSEENESEDL-FDEKDIKLETMRSQGAGGQHVNKTESAVRLTHIPTGTVVS 304

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            Q  RSQH+N+ +A+ +LRA+L +L+L+++  E      S         +IR+Y  Q   
Sbjct: 305 MQDSRSQHQNRERAYMILRARLLDLKLRQKVIENRESRLSQVKNTNRSEKIRTYNFQ-QG 363

Query: 322 MVKDLRTNIEKTSPSDVLDG 341
            V D R  +     +D++DG
Sbjct: 364 RVTDHRIGLTLPRLNDIIDG 383


>gi|259485545|tpe|CBF82657.1| TPA: mitochondrial translation release factor (RF-1), putative
           (AFU_orthologue; AFUA_3G05410) [Aspergillus nidulans
           FGSC A4]
          Length = 418

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/322 (27%), Positives = 144/322 (44%), Gaps = 25/322 (7%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEV--- 99
            + R    L        E  +       L  +  + D +  +     + LQ  + ++   
Sbjct: 66  KIARRAGELGPVAKAWAEWSNANESMSELHSMLEDPDTEAELRSIAVEELQTTEAKLTAI 125

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            +  +   +           LE+  GAGG E+  +A  LL+MY  +   +  ++  +++ 
Sbjct: 126 SDNLKRALVPRHPFADLSCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLE 185

Query: 159 DGEE--AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
            G+     +  A L ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P   
Sbjct: 186 RGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLPSFP 245

Query: 217 DS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           D+              +  I   + R +  RASGAGGQHVN T+SA+R+TH+PTG+VV  
Sbjct: 246 DTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSM 305

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVLQP 319
           Q  RSQH N+ +AW +LRAKL E   + RE+               +G G ++R+Y    
Sbjct: 306 QDSRSQHANRKKAWQILRAKLAEARQEAREQELVELRRGAMGGIGRMGRGDKVRTYNYG- 364

Query: 320 YQMVKDLRTNIEKTSPSDVLDG 341
                D R+     +  +VL+G
Sbjct: 365 QSRCTDHRSGFTVHNLDNVLEG 386


>gi|194761148|ref|XP_001962794.1| GF14253 [Drosophila ananassae]
 gi|190616491|gb|EDV32015.1| GF14253 [Drosophila ananassae]
          Length = 392

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/310 (31%), Positives = 162/310 (52%), Gaps = 12/310 (3%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  ++ +++   ++  +     + EL  +ED  S++QE +     +  + E    
Sbjct: 58  RLAQLEGVVTALEQRRVLERNITSAQDM-ELEKDEDMRSLMQEENAIYTDLLSKQEQTLL 116

Query: 105 ESLLSGEADSNDAYLE--VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
             LL+   D     L   ++AGAGG E+  +A  L  MYT + E + +  E       + 
Sbjct: 117 RELLAMADDEVYPALIFGINAGAGGQEAMLFAQELYEMYTNYFEHKGWDYEEFAHETTDI 176

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            GI+ A++++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P   D +++ 
Sbjct: 177 GGIRHASIMVSGEDAFTWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-VQVH 235

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I++ D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A + LR+
Sbjct: 236 IADKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMSRLRS 295

Query: 283 KLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
           +L + +L+  E       ++ +  +    +IR+Y       + D R       +    L 
Sbjct: 296 RLVQRQLESAEASTKATKKAQQGSLNRNEKIRTYNFV-QDRITDHRLQGGTMHNLDGFLK 354

Query: 341 G--DLDDFMK 348
           G   L   ++
Sbjct: 355 GGEQLTSLIE 364


>gi|224086914|ref|XP_002308002.1| predicted protein [Populus trichocarpa]
 gi|222853978|gb|EEE91525.1| predicted protein [Populus trichocarpa]
          Length = 374

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/340 (24%), Positives = 160/340 (47%), Gaps = 4/340 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R         + +LW++  ++  ++ +      AI  +K+++ +  +  ++ +L
Sbjct: 35  LEHEEARRIKQEEMIHECNLWEDPAKSNEILIKLAGSAKAIDALKDLKYKAEEAKLISQL 94

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
              E  +  + ++       ++  ++  +   LL G  D   A + + AG+ G   + W 
Sbjct: 95  VEMEAINYQLFKQAYTASLDVRKLLDQYEMSRLLKGPYDKQGACVVIRAGSKGLNHEIWK 154

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY +WAEK  +K   +E H     GI+SAT+  +   AYG+L GE+G+H     S
Sbjct: 155 EELLNMYVKWAEKLGYKGRLVEKHTSMHGGIESATIEFEFECAYGYLSGERGIHH-KINS 213

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
              S     T+     V   +    + +I + +  +    +        + T+  V + H
Sbjct: 214 QNGSVHHEVTTACVDVVPLFLGTGFDFQIDDEELIVS--CSPSLLRDRKSRTELTVCLQH 271

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+ VQ   ERS   NK +A N L+AKL  +  +++    +    +     W ++ R 
Sbjct: 272 IPTGISVQSSGERSHFANKVKAHNRLKAKLLVIAEEQKVCDVSSIRRADIVDEWQKETRR 331

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV QPY++V+D+RT IE    + +LDG+++  + A + I+
Sbjct: 332 YVSQPYKLVQDVRTGIELPDLNSILDGNINTLIGAHINIR 371


>gi|76664975|emb|CAJ17928.1| protein chain release factor 2 [Candidatus Phytoplasma solani]
          Length = 175

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 95/166 (57%), Positives = 122/166 (73%), Gaps = 1/166 (0%)

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN++RHTSF S  V P + D I+I +   D +ID +R+SGAGGQHVNTTD
Sbjct: 1   HRLVRVSPFDSNAKRHTSFVSCDVLPEIKDEIKINVKPEDLKIDVFRSSGAGGQHVNTTD 60

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEI 306
           SAVRITH+PTG+VV CQ ERSQ KN+ +A  ML+ KL++L L++++E      +S + EI
Sbjct: 61  SAVRITHLPTGLVVGCQNERSQIKNREKALQMLKTKLFQLALKEQKEETVKQFQSDQKEI 120

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYV  PY+MVKD RTN E      V+DG+LDDF+   L 
Sbjct: 121 GWGSQIRSYVFHPYKMVKDHRTNQENFQLEQVMDGNLDDFINGYLT 166


>gi|320592214|gb|EFX04653.1| mitochondrial translation release factor [Grosmannia clavigera
           kw1407]
          Length = 437

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 53/368 (14%)

Query: 40  IEAKMLMRERQHLDNAISF-------------------IKEIQDRLCDNLILLELALE-E 79
             A+ L  E   L  ++                     + E ++       L  +A   E
Sbjct: 42  ERARRLAAEHGQLQQSLETEYDATAAKRAGEIQGVAQALAEWEEAQRTAEELRTMASAQE 101

Query: 80  DDCSILQETSDNLQRIKLEVE--YKQFESLLSG--EADSNDAYLEVHAGAGGTESQDWAN 135
           +D  + +   D L+  +  ++   +Q  + L+           LE   G GG E + + +
Sbjct: 102 EDEELRKLAKDELEATEARLDGVAQQLTTTLTPKHPFGEMPCLLEFRPGPGGLEGRFFTD 161

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGI---------KSATLLIKGPNAYGWLKGEQG 186
            L  MY  +  ++ ++   ++    +  G          + A L ++   AY   +GE G
Sbjct: 162 SLFHMYQSYCTRQGYRARVIKYEVSDSLGETGADGESALQEAVLEVQEAGAYDVFRGEAG 221

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRIDT 232
           +HR+ RI   + N R HTS +++WV P   DS               +  +  +D R++T
Sbjct: 222 IHRVQRIPATEKNGRTHTSAAAVWVLPSFPDSSGEGDSANDYDDPESDFYVQPADVRVET 281

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RA GAGGQHVN T+SA+R+TH+P+G VV  Q  RSQH+N+  AW +LRA++ +   ++R
Sbjct: 282 MRARGAGGQHVNKTESAIRLTHVPSGTVVSMQDSRSQHQNRDSAWKILRARIAQRRREQR 341

Query: 293 EEIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFM 347
           EE A        SK ++    +IR+Y       V D R  ++  +  DVL G   L   +
Sbjct: 342 EEEARRLRDAVLSKAQVTRSDKIRTYNYS-QDRVTDHRCGLDVHNLPDVLAGGDTLARIV 400

Query: 348 KATLAIKK 355
            A  A ++
Sbjct: 401 SAVCAWQR 408


>gi|325089543|gb|EGC42853.1| peptide chain release factor 1 [Ajellomyces capsulatus H88]
          Length = 438

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 33/338 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVE-- 100
            +++    L    + +KE +        L  L  +   D  +     ++L+  K  +   
Sbjct: 70  KIVKRAGELATTATTLKEWEKANESISELNNLLEDPSTDSELRSLALEDLRSAKASLAIL 129

Query: 101 --YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK------- 151
               +   +           LE+  GAGG E+  +AN LLRMYT +   R  +       
Sbjct: 130 SSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMFCSNRSLRATLLKKE 189

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + G E  +  A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 190 CENAGANGGSEDRLIEAVMEIETPGSYETLRTEAGVHRVQRVPATENKGRTHTSAVSVVI 249

Query: 212 YPVVDDSI--------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            P    +I              +  I   +  ++  RA GAGGQHVN T+SA+R+THIPT
Sbjct: 250 LPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPT 309

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIR 313
           G+VV  Q  RSQH+N+ +AW++LRA++ +   + REE              ++G G +IR
Sbjct: 310 GIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGVMGGVAKMGRGDKIR 369

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
           +Y         D R+ +   +   +++G   L+  M +
Sbjct: 370 TYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEKIMDS 406


>gi|195116636|ref|XP_002002858.1| GI17608 [Drosophila mojavensis]
 gi|193913433|gb|EDW12300.1| GI17608 [Drosophila mojavensis]
          Length = 393

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 162/315 (51%), Gaps = 13/315 (4%)

Query: 44  MLMRERQHLDNAISFI---KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
            L      LD  ++ +   + +Q  +     LL    +ED  ++++E ++    +  + E
Sbjct: 53  RLYARLTRLDPVVNSLEKHRALQRNITSEKDLLAE-KDEDMRALMEEENNVYTSLLRKQE 111

Query: 101 YKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
               + LL  S + D      EV+AGAGG E+  +A  L  MYT + +   ++ E  +  
Sbjct: 112 EDMLQELLALSDDEDYPAVIFEVNAGAGGQEAMLFAQELYDMYTSYFDHMGWEYEEFDRE 171

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
             +  G++ A L +  P AY WL+ E GVHR+ R+   + + R HTS +SI V P   D 
Sbjct: 172 TTDIGGLRHANLQVNDPEAYNWLRFEAGVHRVQRVPATEKSGRIHTSTASITVIPRPAD- 230

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           ++++I+E D +I+T RASGAGGQHVNTTDSAVRI H+P+G+ V+ Q ERSQ KN+  A  
Sbjct: 231 VQVQIAERDLKIETKRASGAGGQHVNTTDSAVRIVHLPSGLAVESQSERSQLKNREVALK 290

Query: 279 MLRAKLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT--NIEKTSP 335
            L+AKL   +LQ  E       ++ +  +    +IR+Y       V D R        + 
Sbjct: 291 RLQAKLIHQQLQSAEATKKATRKAQQGNLNRNEKIRTYNF-VQDRVTDHRVQQGGTLHNL 349

Query: 336 SDVLDG--DLDDFMK 348
              L+G   L   ++
Sbjct: 350 PGFLEGGQQLSGLIE 364


>gi|240279273|gb|EER42778.1| peptide chain release factor 1 [Ajellomyces capsulatus H143]
          Length = 438

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 33/338 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVE-- 100
            +++    L    + +KE +        L  L  +   D  +     ++L+  K  +   
Sbjct: 70  KIVKRAGELATTATTLKEWEKANESISELNNLLEDPSTDSELRSLALEDLRSAKASLAIL 129

Query: 101 --YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK------- 151
               +   +           LE+  GAGG E+  +AN LLRMYT +   R  +       
Sbjct: 130 SSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMFCSNRSLRATLLKKE 189

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + G E  +  A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 190 CENAGANGGSEDRLIEAVMEIETPGSYETLRTEAGVHRVQRVPATENKGRTHTSAVSVVI 249

Query: 212 YPVVDDSI--------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            P    +I              +  I   +  ++  RA GAGGQHVN T+SA+R+THIPT
Sbjct: 250 LPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPT 309

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIR 313
           G+VV  Q  RSQH+N+ +AW++LRA++ +   + REE              ++G G +IR
Sbjct: 310 GIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGVMGGVAKMGRGDKIR 369

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
           +Y         D R+ +   +   +++G   L+  M +
Sbjct: 370 TYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEKIMDS 406


>gi|218514632|ref|ZP_03511472.1| peptide chain release factor 1 [Rhizobium etli 8C-3]
          Length = 236

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 8/209 (3%)

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           K+ +K E L   +GE  G K     I G   +  LK E GVHR+ R+   ++  R HTS 
Sbjct: 19  KKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSA 78

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV    E
Sbjct: 79  ATVAVLPEA-EEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSS-E 136

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           +SQH+N+A+A  +LR++LY+ E   +   +      K+++G G    +IR+Y   P   V
Sbjct: 137 KSQHQNRAKAMQVLRSRLYDAER--QRADSERSADRKSQVGSGDRSERIRTYNF-PQGRV 193

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            D R N+       +++G++++ + A +A
Sbjct: 194 TDHRINLTLYKLDRMMEGEIEEVVDALMA 222


>gi|71028468|ref|XP_763877.1| peptide chain release factor 2 [Theileria parva strain Muguga]
 gi|68350831|gb|EAN31594.1| peptide chain release factor 2, putative [Theileria parva]
          Length = 376

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 88/272 (32%), Positives = 144/272 (52%), Gaps = 20/272 (7%)

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK---- 149
           ++K   +  + +   + + D N   L + +G GG+ES DW  +L  MY ++         
Sbjct: 66  KLKDSNKSAELD--PTRKYDRNYCKLIIKSGVGGSESFDWCRILAEMYKKFISSYDPPPG 123

Query: 150 ------FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
                  + + +++  G   G +     + G  AY  LKGE G HRL+R SP++S+ +R 
Sbjct: 124 PNLPTSLRLKEVDVCPGTSGGFRRVEYDVIGDYAYRLLKGENGTHRLIRNSPFNSDHKRQ 183

Query: 204 TSFSSIWVYPVVDDSIEIEIS--------ESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           T+F+++   P++ D+ E  I+        + D  I++ R+SG GGQ+VN  ++AVR+ H 
Sbjct: 184 TTFATVQAVPILSDTDEEIINFKKNRQILKKDLIIESMRSSGKGGQNVNKVETAVRVYHK 243

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+ V+ QQER+  +N+  A  ML   + E  L+K  E  +  + +     WG  IR+Y
Sbjct: 244 PTGLSVKVQQERTNTQNREIAIRMLTKLVDEHYLKKLNEKLDDIKGADLVGTWGSHIRTY 303

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            L P Q VKD RTN E    ++VL+GDL   +
Sbjct: 304 TLNPEQRVKDHRTNFETAKATNVLNGDLLPII 335


>gi|47218558|emb|CAG10257.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 438

 Score =  195 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 105/380 (27%), Positives = 168/380 (44%), Gaps = 43/380 (11%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA-------KMLMRERQHLDNAISFIKE 61
            LG L   ++  + L  L  +    ++ Q +  A       K L+R    L    + +  
Sbjct: 54  DLGDLLSNESVQKYLQQLMEECR--NVSQKLQHAHLSESERKGLLRRHAELLPVATALDS 111

Query: 62  IQDRLCDNLILLELALEE---DDCSI----LQETSDNLQRIKLEVEYKQFESLLS-GEAD 113
           ++    D   ++ L       D+  +    L+E   ++ +  L +     ++LL     D
Sbjct: 112 VRRASRDREEVVSLLQSSSGVDEDKLFTQQLEEEEGHISQKLLSLRRDLVKALLPADPLD 171

Query: 114 SNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE---------- 161
           S++  LEV +G   GG   Q +   +  MY  +A  + +  E +   + E          
Sbjct: 172 SSNVLLEVVSGRTTGGDICQQFTREVFDMYQGFASHKNWDFEPVNYTNAEYGCDVRGCCL 231

Query: 162 --EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVD 216
               G+  A   I G N Y  LK E G HR+ RI     +SR    HT   ++ + P   
Sbjct: 232 LLSGGLHHAAARITGENVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPA 291

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +++ +   D RIDT+R+ GAGGQ VNTTDSAVR+ H+PTG+ V+CQQ RSQ +N+  A
Sbjct: 292 E-LDLHVDPKDLRIDTFRSRGAGGQSVNTTDSAVRVVHLPTGIAVECQQSRSQLQNRDTA 350

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKT 333
              LRA+LY+  L K  E      + + ++G      +IR+Y       V D RT     
Sbjct: 351 MRALRARLYQARLGK--ESQRRLSARRQQVGTRSQSERIRTYNFS-QDRVTDHRTGYTAR 407

Query: 334 SPSDVLDGD--LDDFMKATL 351
              + + G   L D +   L
Sbjct: 408 DIKEFMRGGQALQDLIGDVL 427


>gi|195398186|ref|XP_002057705.1| GJ17953 [Drosophila virilis]
 gi|194141359|gb|EDW57778.1| GJ17953 [Drosophila virilis]
          Length = 393

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 11/310 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFE 105
               LD  ++ +++ +    +     +LA E  ED  +++ E ++    +  + E    +
Sbjct: 58  RLSRLDPVVNSLEKHRALQRNITPEQDLAAEKDEDMRALMLEENNVYAELLRKQEEAMLQ 117

Query: 106 SLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
            LL+     D      EV+AGAGG E+  +A  L  MYT + E   ++ E       +  
Sbjct: 118 ELLALADHEDYPSLIFEVNAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEQYAHETTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A LL+  P AY WL+ E GVHR+ R+   + + R HTS +SI V P   D +++ I
Sbjct: 178 GLRYANLLVNDPEAYNWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-VQVHI 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+AK
Sbjct: 237 AERDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVESQSERSQLKNRELALKRLQAK 296

Query: 284 LYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT--NIEKTSPSDVLD 340
           L + +L+  E       ++ +  +    +IR+Y       V D R      + + S  L+
Sbjct: 297 LMQQQLESSEATKQATRKAQQGNLNRNEKIRTYNFV-QDRVTDHRVQQGGTQHNLSGFLE 355

Query: 341 GD--LDDFMK 348
           G   L D ++
Sbjct: 356 GGQPLSDLIE 365


>gi|225559538|gb|EEH07820.1| peptide chain release factor 1 [Ajellomyces capsulatus G186AR]
          Length = 438

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 93/338 (27%), Positives = 152/338 (44%), Gaps = 33/338 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEV--- 99
              +    L    + +KE +        L  L  +   D  +     ++L+  K  +   
Sbjct: 70  KTAKRAGELATTATTLKEWEKANESISELNNLLEDPSTDSELRSLALEDLRSAKASLTIL 129

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT------ 152
               +   +           LE+  GAGG E+  +AN LLRMYT +   R  +T      
Sbjct: 130 SSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMFCSNRSLRTTLLKKE 189

Query: 153 -EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + G E  +  A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 190 CENAGANGGSEDRLIEAVMEIETPGSYETLRTEAGVHRVQRVPTTENKGRTHTSAVSVVI 249

Query: 212 YPVVDDSI--------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            P    +I              +  I   +  ++  RA GAGGQHVN T+SA+R+THIPT
Sbjct: 250 LPSFSSNIGEGDSELNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPT 309

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIR 313
           G+VV  Q  RSQH+N+ +AW++LRA++ +   + REE              ++G G +IR
Sbjct: 310 GIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGVMGGVAKMGRGDKIR 369

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
           +Y         D R+ +   +   +++G   L+  M +
Sbjct: 370 TYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEKIMDS 406


>gi|332375689|gb|AEE62985.1| unknown [Dendroctonus ponderosae]
          Length = 400

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 96/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE---VEYKQFESL 107
            L   I+ I +  + + + + L ELA    D  +     +    ++ +   +E    ++L
Sbjct: 77  ELQPVINIITKRDELITNIVDLKELAA-SPDKDLAALAKEEETELETKLYHLEETLIDAL 135

Query: 108 LSGEADSND----AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
           L    D  D      LEV AG GG E+  +A  +  MY  +   + +K + ++    +  
Sbjct: 136 L--PEDREDSFDTIILEVQAGVGGQEAMLFAQEMFDMYCSFISLKGWKYDIVDYMGTDLG 193

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GI+  ++L+ G  AY + K E GVHR+ RI   + +SR HTS  S+   P  ++ I+I I
Sbjct: 194 GIRRGSILVNGSKAYKFFKHEGGVHRVQRIPSTEKSSRIHTSTVSVTALPQPNE-IDIRI 252

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
              D +I+T R++GAGGQHVNTTDSAVRI H+PT ++V+CQ +RSQ KN+  A   LRA 
Sbjct: 253 DPKDLKIETKRSTGAGGQHVNTTDSAVRIVHLPTNIMVECQVDRSQIKNRKLALTKLRAL 312

Query: 284 LYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR-TNIEKTSPSDVLD- 340
           LY+ EL+++  +  +  +S  +      +IR+Y       + D R + +   +    ++ 
Sbjct: 313 LYQRELEEQLAQQESTKKSQVSSNNRNEKIRTYNFN-QDRITDHRLSGVHFHNIKMFMET 371

Query: 341 -GDLDDF 346
             DL++ 
Sbjct: 372 GADLEEL 378


>gi|323446989|gb|EGB02968.1| hypothetical protein AURANDRAFT_12526 [Aureococcus anophagefferens]
          Length = 305

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/301 (32%), Positives = 145/301 (48%), Gaps = 26/301 (8%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFE---SLLSGEA--DSNDAYLEVHAGAGGTESQDWA 134
            D  +  E     + +  +V     +    LL  +A  D+    +EV A AGG E+  +A
Sbjct: 2   GDAELRDEARRERELLTPKVATLAHDLTAKLLPRDAVDDAPACLVEVKAAAGGDEASLFA 61

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+A +R+   + L +   +  G+  A   +KGP AYG L+ E GVHR+ R+ 
Sbjct: 62  GDLLAMYERFAGRRRHGWDLLSVTKSDCGGVSHAYAEVKGPGAYGALRFESGVHRVQRVP 121

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH------------ 242
             D      T+   ++     D    ++   ++ RIDT+RASGAGGQH            
Sbjct: 122 RNDVRIHTSTASVVVFPAGAEDRGATVDFDPAELRIDTFRASGAGGQHATTRMEIFNPTS 181

Query: 243 ------VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
                 VNTT+SAVR+TH+PTG VV  Q ERSQH+NKA+A  +L +++   +        
Sbjct: 182 MRAYQNVNTTNSAVRVTHLPTGTVVSIQDERSQHRNKAKALKVLASRVVGAQAAAAAAAR 241

Query: 297 NIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           +   +     G    +IR+Y   P+  V D R+     S   VL GD LDD + +  A  
Sbjct: 242 SASRAKLAGSGDRAERIRTYNA-PHDRVTDHRSGFTANSVDRVLRGDLLDDVVASLEAAD 300

Query: 355 K 355
           +
Sbjct: 301 R 301


>gi|19921226|ref|NP_609617.1| CG5705 [Drosophila melanogaster]
 gi|7298021|gb|AAF53262.1| CG5705 [Drosophila melanogaster]
 gi|16769148|gb|AAL28793.1| LD18447p [Drosophila melanogaster]
 gi|220943136|gb|ACL84111.1| CG5705-PA [synthetic construct]
 gi|220953196|gb|ACL89141.1| CG5705-PA [synthetic construct]
          Length = 392

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 96/310 (30%), Positives = 162/310 (52%), Gaps = 12/310 (3%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  +S +++   ++  +     + E   +ED   +++E ++    +  + +    
Sbjct: 58  RLAQLEGVVSALEQRRVLERHITSAKDM-EAEKDEDMRELMREENEVYVDLLGKQDQALL 116

Query: 105 ESLLSGEADSNDAYLE--VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + LL+   D     L   ++AGAGG E+  +A  L  MYT + E   ++ E       + 
Sbjct: 117 QELLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDI 176

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++ A+L++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P   D I++ 
Sbjct: 177 GGLRHASLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IQVH 235

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR+
Sbjct: 236 IAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRS 295

Query: 283 KLYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
           +L + +L+  E       ++ +  +    +IR+Y       + D R       + +  L 
Sbjct: 296 RLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNF-VQDRITDHRIQGGTLHNLNGFLK 354

Query: 341 G--DLDDFMK 348
           G   L   ++
Sbjct: 355 GGDQLSGLIE 364


>gi|302830560|ref|XP_002946846.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
 gi|300267890|gb|EFJ52072.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
          Length = 361

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 105/320 (32%), Positives = 152/320 (47%), Gaps = 38/320 (11%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESL-LSGEADS 114
            I+ +   L     L  L  + D    ++ +E    LQ+    +  +   +L      D 
Sbjct: 1   MIRGMASSLLQLEDLAALLKDPDSRVRAMAEEEGRELQQQAAGLTRRLLLALVPRDPRDG 60

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-- 172
             A LE+ AGAGG E+  +   LL MY ++A  R +  + +E+   E  G     +    
Sbjct: 61  RAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVPGGVKHVVAAVA 120

Query: 173 ----------------------------KGP--NAYGWLKGEQGVHRLVRISPYDSNSRR 202
                                        G     YG L  E GVHR+ R+   ++  R 
Sbjct: 121 AGRGAGRRAGGIGDGGEGYDGGEGNSDQDGDAIGVYGTLLPESGVHRVQRVPVTEAQGRV 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  ++ V P   D +++++ + D RI+T RASGAGGQHVN TDSAVRITH+PTG+VV 
Sbjct: 181 HTSTVAVVVLPQA-DEVDVKLRDEDLRIETMRASGAGGQHVNVTDSAVRITHVPTGLVVS 239

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           CQ ERSQH N+A A  +LRA+LY+LE+QKR +E+     +         +IR+Y   P  
Sbjct: 240 CQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSERIRTYNF-PQG 298

Query: 322 MVKDLRTNIEKTSPSDVLDG 341
            V D R ++       VL G
Sbjct: 299 RVTDHRIHLTLHDLDSVLVG 318


>gi|194860855|ref|XP_001969666.1| GG23822 [Drosophila erecta]
 gi|190661533|gb|EDV58725.1| GG23822 [Drosophila erecta]
          Length = 392

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 95/301 (31%), Positives = 158/301 (52%), Gaps = 10/301 (3%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  +S +++   ++ ++     + E   +ED   +++E ++    +  + +    
Sbjct: 58  RLAQLEGVVSALEQRRVLERQITSAKDM-EAEKDEDMRELMREENEVYVDLLGKQDQALL 116

Query: 105 ESLLSGEADSNDAYLE--VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + LL+   D     L   ++AGAGG E+  +A  L  MYT + E   ++ E       + 
Sbjct: 117 QELLTLSDDEMYPALIFGLNAGAGGQEAMLFAQELYEMYTGFFEHMGWEWEEFASEITDI 176

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++ A+L++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P   D I + 
Sbjct: 177 GGLRHASLMVSGEDAFRWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IHVH 235

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR+
Sbjct: 236 IAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRS 295

Query: 283 KLYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
           +L + +L+  E       ++ +  +    +IR+Y       + D R       +    L 
Sbjct: 296 RLVQQQLESAEASKMATKKAQQGSLNRNEKIRTYNF-VQDRITDHRIQGGTMHNLDGFLK 354

Query: 341 G 341
           G
Sbjct: 355 G 355


>gi|322704975|gb|EFY96565.1| putative translation releasing factor RF-1 [Metarhizium anisopliae
           ARSEF 23]
          Length = 415

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 94/346 (27%), Positives = 153/346 (44%), Gaps = 39/346 (11%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  +A    R    L    + +   Q        L  +A +E D  +     D LQ  + 
Sbjct: 49  DSQKA----RRAGELHRVAAALSAWQQSHSSIRDLQAMADDEQDPDLAAIARDELQAEEE 104

Query: 98  EVEYKQ--FESLLSGEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++   +    + L+ +    D    +E   G GG E + + + L +MY     +R ++  
Sbjct: 105 KLASLEKNLSASLTPQHPFADMPCMIEFRPGPGGLEGRYFTDSLFKMYKALCARRGYRAN 164

Query: 154 ALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
            L+    + AG          ++ A L I+   AY   + E G+HR+ RI   +S  R H
Sbjct: 165 VLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDLFRSEAGMHRVQRIPSTESKGRVH 224

Query: 204 TSFSSIWVYPVVDD---------------SIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           TS  ++WV P   +                 +  ++  + R++T RA GAGGQHVN T+S
Sbjct: 225 TSAVAVWVLPSFPEGGSSGGGGEADADDPESDFYVNPQEVRVETMRARGAGGQHVNKTES 284

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTE 305
           A+R+TH+PTG  V  Q  RSQ +N+  AW +LR+++     + R   A    +S   + +
Sbjct: 285 AIRMTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIAGQRAELRMHEAARLRNSVLAQAQ 344

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
           I  G +IR+Y         D R  ++  +  DVLDG   LD  M A
Sbjct: 345 ITRGDKIRTYNYN-QDRCTDHRAGLDVHNLPDVLDGGETLDRVMDA 389


>gi|242087755|ref|XP_002439710.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
 gi|241944995|gb|EES18140.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
          Length = 409

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 5/343 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A QR+          +LW N  ++   +         +  +K+++ +  +  ++ 
Sbjct: 70  LELEEA-QRIKQ-EEVLRKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLIS 127

Query: 74  ELAL-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L+  +  +  + ++   +       ++  Q   LL G  D   A + V A + G  S+ 
Sbjct: 128 QLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACIIVTAVSNGVTSEL 187

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  +  MYT WA K+ +K   +E        I+SA + I+    +G L GE+G+H+++ 
Sbjct: 188 WAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSAAMEIESEYMFGTLSGEKGMHQMIY 247

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            S  +S+  +  S     +   +D  +++ + + D    T  +     +      +AVR+
Sbjct: 248 SSLENSDIDQALSARVDIIPLFLDRPVDLHLDDGDIE--TSPSPSVHKKRGRRNGAAVRV 305

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H+P+GV  +   ERS   NK +A + L+AKL  +  + R     +      E     + 
Sbjct: 306 QHVPSGVTAESSGERSYFANKLKATSRLKAKLLLVARELRVSDVKLINRQAIEDKCNSET 365

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R Y   P+++V DL T I+ +  + VL+GD++ F++  +  ++
Sbjct: 366 RRYTFGPHKLVHDLNTGIQLSDLNSVLEGDIEPFIRGRVTSRQ 408


>gi|195472530|ref|XP_002088553.1| GE18626 [Drosophila yakuba]
 gi|194174654|gb|EDW88265.1| GE18626 [Drosophila yakuba]
          Length = 392

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 12/310 (3%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  +S +++   ++  +     + E   +ED   +++E ++    +  + +    
Sbjct: 58  RLAQLEGVVSALEQRRVLERHITSAKDM-EAEKDEDMRELMREENEVYVDLLGKQDQALL 116

Query: 105 ESLLSGEADSNDAYLE--VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + LL+   D     L   ++AGAGG E+  +A  L  MYT + +   +  E       + 
Sbjct: 117 QELLTLSDDEQYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFDHMGWNWEEFAGESTDI 176

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++ A+L++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P   D I++ 
Sbjct: 177 GGLRHASLMVSGEDAFRWLRFEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IQVH 235

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR+
Sbjct: 236 IAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRS 295

Query: 283 KLYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
           +L + +L+  E       ++ +  +    +IR+Y       + D R       +    L 
Sbjct: 296 RLVQQQLESVEANKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGTLHNLDGFLK 354

Query: 341 G--DLDDFMK 348
           G   L   ++
Sbjct: 355 GGDQLSGLIE 364


>gi|256079594|ref|XP_002576071.1| peptide chain release factor [Schistosoma mansoni]
 gi|238661330|emb|CAZ32306.1| peptide chain release factor, putative [Schistosoma mansoni]
          Length = 1202

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 94/323 (29%), Positives = 159/323 (49%), Gaps = 36/323 (11%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALE------EDDCSILQETSDNLQRIKLEVEYK- 102
           ++L   +  I+E+   L  +  + +L  +      EDD + L+     L+R +  V+ + 
Sbjct: 77  KNLRPIVDVIEELDILLEADKEVDQLVTDIVGTDTEDDVNDLK-AIAELERKQRNVQREA 135

Query: 103 -----QFESLLSGEADSNDA-YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                    L   E D N A  +E+ AGAGG E+  +A+ L+ MY  +A ++ +    L 
Sbjct: 136 LEKKLLSLLLPIDERDLNSAVIMELFAGAGGKEAGLFAHDLMNMYHAFAVQQNWSFTVLH 195

Query: 157 --IHDGEEAGIKS-------ATLLIKGP----------NAYGWLKGEQGVHRLVRISPYD 197
             +   EE              + I+G            AYG LK E GVHR+ R+    
Sbjct: 196 KTVMSNEECAPSHNETSLSYVRVEIEGEPTTEAGVMSLGAYGQLKWEAGVHRVQRVPVTS 255

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S ++ HTS  ++ + P   + ++++I ++D + + +R +G GGQ+VN + SAVR+TH+PT
Sbjct: 256 SQNKIHTSTVAVSIQPK-YEDVDVDIPDNDLKWEFHRPTGPGGQNVNKSTSAVRLTHLPT 314

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYV 316
           G+V+ CQ+ER QH NK  A +ML+ +L E+ L+ +   I +I  S    +    +IR+Y 
Sbjct: 315 GIVISCQRERYQHVNKILALDMLKERLREIHLKSQSHLIDSIRRSHLGNLDRSEKIRTYN 374

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL 339
             P   V D R N    +    +
Sbjct: 375 F-PQDRVTDHRLNHSWNNLYRFM 396


>gi|163803384|ref|ZP_02197260.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
 gi|159172846|gb|EDP57688.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
          Length = 193

 Score =  192 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 91/192 (47%), Positives = 131/192 (68%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  +
Sbjct: 2   WNEPERAQALGKERASLEAIVETIVQLEQGVEDVEGLLELAVEEEDQETFDEIEPELAEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E +
Sbjct: 62  EGKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +
Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEI 181

Query: 216 DDSIEIEISESD 227
           DD+I I+I+ SD
Sbjct: 182 DDNINIDINPSD 193


>gi|125984748|ref|XP_001356138.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
 gi|54644457|gb|EAL33198.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
          Length = 392

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 95/301 (31%), Positives = 154/301 (51%), Gaps = 10/301 (3%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  ++ +++   ++  +      +E   +ED   +++E ++    +  + E    
Sbjct: 58  RLSQLEGVVNALEQRRVLERNITSAKD-IEQEKDEDMRKLMEEENEVYADLLSKQEQTML 116

Query: 105 ESLLSGEADSNDAYLE--VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + LL+   D     L   V+AGAGG E+  +A  L  MYT + E   ++ E       + 
Sbjct: 117 QELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDI 176

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++ A +++ G +A+ WL+ E GVHR+ R+   +   R HTS  SI V P   D + + 
Sbjct: 177 GGLRHANVMVNGADAFHWLRFEAGVHRVQRVPATEKAGRMHTSTVSITVIPRPAD-VHVH 235

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+A
Sbjct: 236 IAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELALKRLQA 295

Query: 283 KLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
           +L + +L+  E       ++ +  +    +IR+Y       V D R       +    L 
Sbjct: 296 RLVQQQLESSEASKQATKKAQQGSLNRNEKIRTYNFV-QDRVTDHRIQGGTLHNLDGFLK 354

Query: 341 G 341
           G
Sbjct: 355 G 355


>gi|146161938|ref|XP_001008252.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila]
 gi|146146594|gb|EAR88007.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 452

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 88/335 (26%), Positives = 165/335 (49%), Gaps = 18/335 (5%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL----ELALEEDD 81
           L+ + +   +       + L ++   L       ++++  +     L     E A + + 
Sbjct: 99  LSQEQQQADI-----NLEQLRKKINVLQPLNDVFEKLEQNIKTLQELQKQKEESASDPEM 153

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAY-LEVHAGAGGTESQDWANMLLR 139
            ++++E  +N +++  E++ +  E LL  G+ D      LEV  GAGG+ES  +A  + +
Sbjct: 154 LALIEEEMENSKQLIDELQDECLEQLLPKGKHDDCSEITLEVRGGAGGSESSLFAEEVFK 213

Query: 140 MYTRWAEKRKFKTEALEIH--DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           MY  +  ++ ++              G K   L + G N Y  +  E GVH+++R+   +
Sbjct: 214 MYQAFFAQQGYQFSIDSFQVDMAINKGCKLGVLKVSGTNIYKKMMNESGVHKVIRVPETE 273

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R H+S  S  V  +    ++ ++ E D + +  R+ GAGGQHVN  +SA R+TH+PT
Sbjct: 274 SKGRLHSSTIS--VVVMPVVPMDFKVDEKDLKFEFMRSQGAGGQHVNKVESACRVTHLPT 331

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYV 316
           G+ V CQ +R Q +NK +A  +L  KL+++E++K  +  +    S+   G    +IR+Y 
Sbjct: 332 GISVLCQDDRQQERNKQRALKLLTEKLFQVEVEKSNQQQSDQRKSQIGGGDRSDKIRTYN 391

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
             P   + D RTN+       ++ G+ L++F+   
Sbjct: 392 F-PQGRITDHRTNLTLFGIEKMMKGEFLEEFIDEY 425


>gi|226493092|ref|NP_001141218.1| hypothetical protein LOC100273305 [Zea mays]
 gi|194703328|gb|ACF85748.1| unknown [Zea mays]
          Length = 407

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 91/338 (26%), Positives = 150/338 (44%), Gaps = 36/338 (10%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYKQ 103
           + +    L      +K  Q        L  +  + D D  +     D L     ++E   
Sbjct: 46  IAKRVGELSRVAEALKAWQTSQASVAELTSMLDDPDQDADLAAIARDELSSETGKLES-- 103

Query: 104 FESLLSGEADSND------AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
               LS               LE   G GG E + + + L +MY     +R ++   ++ 
Sbjct: 104 LARRLSASLTPRHPFADFPCMLEFRPGPGGLEGRYFMDTLFKMYKALCMRRGYRHTVVKY 163

Query: 158 HDGEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
              + AG          ++ A L +  P A+   + E G+HR+ RI   ++  R HTS  
Sbjct: 164 EFADTAGDSSSSAGENPLQEAILEVHDPGAFDIFRSEAGMHRVQRIPSTETKGRVHTSAV 223

Query: 208 SIWVYPVVDDS-----------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++WV P   ++            +  ++  + +I+T RA GAGGQHVN T+SA+R+TH+P
Sbjct: 224 AVWVLPSFPENGAANIDFDDPESDFYVNPQEVKIETMRARGAGGQHVNKTESAIRMTHLP 283

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES---SKTEIGWGRQIR 313
           TG  V  Q  RSQ +N+ +AW +LR+++ +   + REE A+   +   SKT+I  G +IR
Sbjct: 284 TGTTVSMQDHRSQQRNREEAWKLLRSRIADQRREAREEEASNLRNSVLSKTQITRGDKIR 343

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKA 349
           +Y         D R  ++     +VL+G   LD  M  
Sbjct: 344 TYNYN-QDRCTDHRAGVDVHDLPNVLEGGEKLDRIMDG 380


>gi|328853865|gb|EGG03001.1| hypothetical protein MELLADRAFT_109720 [Melampsora larici-populina
           98AG31]
          Length = 413

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 92/325 (28%), Positives = 159/325 (48%), Gaps = 24/325 (7%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W N    K   +    + + +   + + + + +  ++   +  + D  + Q     L+ +
Sbjct: 65  WSNGEFLKK-SKRVDSIKSTLEEWERVMNLVSELQLI---SNTDPDPDMRQIALTELESL 120

Query: 96  -----------KLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTR 143
                         ++ +  ESL          A +E+  G GG E+  +A  L+ +Y R
Sbjct: 121 YSSSDQESSNNLSNIKSRLLESLFPTPISHRQSALVEIKPGVGGVEAAHFATSLMNLYNR 180

Query: 144 WAEKRKFKTEALEI----HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            A ++K+K + + +          G++ ATL I+G + Y  ++ E GVHR+ R+    + 
Sbjct: 181 HALRQKWKVKPVNVEFMVSGHSMDGLREATLEIEGEDVYKRMRWEAGVHRVQRVPVMQNT 240

Query: 200 SRRHTSFSSIWVYPVVDDSIEIE--ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  HTS +++      +   + E    E D R++T R+ GAGGQHVN T+SAVR+TH+PT
Sbjct: 241 SSVHTSTAAVLPLDPGNQDSQEEALFEEKDVRMETMRSQGAGGQHVNKTESAVRLTHVPT 300

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQIRSYV 316
           G+VV  Q  RSQH+N+A+A+ +LRA+L +L   QK+ E   +  S        ++IR+Y 
Sbjct: 301 GIVVSMQDSRSQHQNRARAFMILRARLSDLRNQQKQVEERGLRLSQVKTSDRNQKIRTYN 360

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDG 341
            Q    V D R  +      DV++G
Sbjct: 361 FQ-QGRVTDHRIGLTLPRLHDVMEG 384


>gi|170595371|ref|XP_001902354.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
 gi|158590015|gb|EDP28797.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
          Length = 382

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 156/315 (49%), Gaps = 15/315 (4%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFES 106
           HL+   +   +  D+L     L  L  E +D  I +    + +++  E++          
Sbjct: 53  HLETVTTLAHKFYDKLEMLTQLDLLLKEGNDPEIQEIAKLDSEQLTEELDSVVNKLTDVV 112

Query: 107 LLSGEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +   E D  N+  LE+  G GG E+  +A+ L +MY  +A+  K+K    ++      GI
Sbjct: 113 IPVTEYDLLNNCQLEITPGVGGVEASLFASELAQMYHNYAQFMKWKWTPYQMDVSPSGGI 172

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +SA + ++G  A+  L+ E GVHR+ R    D  +R HTS S + V P   D IE  ++ 
Sbjct: 173 RSAVVFVRGNGAFRTLRYEAGVHRVQRFPVTD-KTRMHTSTSVVAVLPEP-DKIEACVTP 230

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D +++T RASG GGQ+VN   +AVR+TH  TGV V C  ER+Q+ N   A+  L A L 
Sbjct: 231 ADVKVETMRASGPGGQNVNQRSTAVRLTHRETGVTVHCTDERTQYSNMEIAYKRLAAILL 290

Query: 286 ELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           + +L   E       S K +IG      ++R+Y  +  Q V D R        ++V+ G+
Sbjct: 291 QRKLD--ETQKQYSSSRKLQIGTKARAEKVRTYNFKDDQ-VTDHRLGRAWQGVANVMKGN 347

Query: 343 --LDDFMKATLAIKK 355
             L+  +++   + K
Sbjct: 348 SVLNQIIQSLDELSK 362


>gi|329913866|ref|ZP_08275999.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545272|gb|EGF30526.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 164

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 99/162 (61%), Positives = 129/162 (79%), Gaps = 1/162 (0%)

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +R SP+DS + RHTSFSS++VYP VDDS+EI+I+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 1   MRKSPFDSANGRHTSFSSLFVYPEVDDSLEIDINPADVRVDTYRASGAGGQHINKTDSAV 60

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+VVQCQ +RSQH+N+A+AW ML+++LYE E++KR       E SKT+IGWG 
Sbjct: 61  RLTHGPTGIVVQCQNDRSQHRNRAEAWAMLKSRLYEHEMRKRMSDQQKLEDSKTDIGWGH 120

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT+ E  +   VLDGD+D+F+ A+L 
Sbjct: 121 QIRSYVL-DQSRIKDLRTSFETGNTKAVLDGDIDEFIAASLK 161


>gi|302901381|ref|XP_003048424.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
 gi|256729357|gb|EEU42711.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
          Length = 412

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 159/364 (43%), Gaps = 41/364 (11%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +       L           +  +AK +  E   +  A+   ++ Q  + +   +  L  
Sbjct: 30  SMTSEYDELQKTLNA-SF--DSTKAKRVG-ELSRVAEALKAWEKSQASVAELTAM--LND 83

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND------AYLEVHAGAGGTESQ 131
            E D  ++    D L+    ++E       LS               +E   G GG E +
Sbjct: 84  PEQDADLVSIARDELESETGKLES--LARNLSASLTPRHPFADFPCMIEFRPGPGGLEGR 141

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWL 181
            + + L +MY     ++ ++   ++    + AG          ++ A L I+   A+   
Sbjct: 142 YFTDTLFKMYKALCMRKGYRHSVMKYEFADTAGDSSSSAGENPLQEAVLEIQDQGAFDLF 201

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-----------IEIEISESDCRI 230
           + E G+HR+ RI   +S  R HTS  ++WV P   +S            +  ++  D +I
Sbjct: 202 RSEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESGAGSVDFEDPESDFYVNPQDVKI 261

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +  RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+ +AW M+RA++ +   +
Sbjct: 262 EAMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNRDEAWKMMRARIADQRRE 321

Query: 291 KREEIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDD 345
            REE A    +   SKT+I  G +IR+Y         D R  I+     +VL+G   LD 
Sbjct: 322 AREEEAARLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHDLPNVLEGGEKLDR 380

Query: 346 FMKA 349
            M  
Sbjct: 381 IMDG 384


>gi|296422823|ref|XP_002840958.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637185|emb|CAZ85149.1| unnamed protein product [Tuber melanosporum]
          Length = 309

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 19/292 (6%)

Query: 81  DCSILQETSDNLQRIKLEVEYK---QFESLL-SGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +      ++   +  +        +SL+         A +E+  G GG+E+  +A  
Sbjct: 8   DPELRPLAVSDIASTESSLSALATTITQSLVQPHPFAHLSALVEIRPGTGGSEASLFAGD 67

Query: 137 LLRMYTRWAEK-RKFKTEALEIHDGEEAG--IKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           LL++YT +    R +    + +  G E G  ++ A   ++   AY   +GE GVHR+ R+
Sbjct: 68  LLKLYTMYCANIRNWPLSMVSLTAGAEGGDGVQEAIFEVEASGAYEIFRGEAGVHRVQRV 127

Query: 194 SPYDSNSRRHTSFSSIWVYP--------VVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
              +   R HTS  ++ V P          ++  +  I   D R+D  RA GAGGQHVNT
Sbjct: 128 PATEKQGRTHTSTVNVVVLPSFPEVQLGEGEEDPDSIIDMKDVRVDVMRARGAGGQHVNT 187

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTG+V   Q  RSQHKN+A+A  +L++++ E    +RE        S  +
Sbjct: 188 TDSAVRMTHIPTGIVAAIQDSRSQHKNRAKAMVVLKSRIAEKRRAEREAEELALRRSVAK 247

Query: 306 I--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           +  G   ++R+Y       V D R           ++G+ LD  +      +
Sbjct: 248 VNAGRSDKMRTYNYI-QNRVTDHRCGFSLHDLPSFMNGETLDSMIDRVRKWQ 298


>gi|332027664|gb|EGI67732.1| Peptide chain release factor 1-like, mitochondrial [Acromyrmex
           echinatior]
          Length = 406

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 92/314 (29%), Positives = 159/314 (50%), Gaps = 17/314 (5%)

Query: 34  HLWQ--NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +     ++  +  L  ER  L   +  I+ + +    ++ + +LA EE          + 
Sbjct: 76  NFIDFIDLNASGSLFNERIQL---VENIQNLHNLGQQDIEIKKLADEETM-----LYKEQ 127

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L  +   + +    ++       ++  +E+ AG GG E+  +   L  MY  +A+     
Sbjct: 128 LNELDERLLHMILTNMCKDFY--SNIIIEITAGVGGQEAMLFVKDLYDMYIDYAKCLDLD 185

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++I   +  GI+  +++I G       + E GVHR+ R+   + + R HTS +S+ +
Sbjct: 186 HEVIDIEMTDNKGIRHVSIMISGDQVD-KFQHEGGVHRVQRVPATEKSGRVHTSTASVAI 244

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            PV  + I+I I+E+D +I+T R+SGAGGQHVNTTDSAVRITH+P+G+ V CQ +RSQ++
Sbjct: 245 LPVPSE-IQIMINENDLKIETKRSSGAGGQHVNTTDSAVRITHLPSGLSVTCQVDRSQNR 303

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNI 330
           NK  A + LR+ LYE +L K+    +     +  +G    +IR+Y       V D R   
Sbjct: 304 NKKIAMDKLRSILYEQQLNKQTSFTSKLRQKQMGMGFRNEKIRTYNYN-QNRVTDHRLGQ 362

Query: 331 -EKTSPSDVLDGDL 343
               +  + + G +
Sbjct: 363 NGTFNLIEFMQGGI 376


>gi|258566533|ref|XP_002584011.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237907712|gb|EEP82113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 412

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 32/327 (9%)

Query: 44  MLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV- 99
              +    L  A+  +KE    Q+ + +  +L E +    D  + +  S++L+     + 
Sbjct: 45  ETAKRVGELTLAVQALKEWDKAQETIAELNVLREDS--STDHELRELVSEDLETAVSSLP 102

Query: 100 ---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                 +   +           +E+  GAGG E+  +A+ LLRMY     +R F+T  L+
Sbjct: 103 TLSNKLKESLVPRHPFAEFPCLVEIRPGAGGAEASLFASELLRMYLAVCSRRGFRTTILK 162

Query: 157 I-------HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
                     G E  +  A + I+ P +Y   + E GVHR+ RI   ++  R HTS  S+
Sbjct: 163 KDTEDGYGSGGSEDLLSEAVVEIETPRSYDIFRTEAGVHRVQRIPATEAKGRVHTSAVSV 222

Query: 210 WVYPVVDD-----------SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            + P   +           + +  I+  + + +  RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 223 MILPSFPEQNDGALNFDDPNSDYYINPQEVQSEKMRASGAGGQHVNKTESAVRLTHIPTG 282

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRS 314
            VV  Q  RSQH+N+ +AW +LR+K+ ++  + RE+              ++G G ++R+
Sbjct: 283 TVVAVQDTRSQHENRRKAWRLLRSKIAQMRREAREQQLVELRRGIMGGVAKMGRGDKVRT 342

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y         D R+ +   + SDVL+G
Sbjct: 343 YNFG-QNRCTDHRSGMTIHNLSDVLEG 368


>gi|14042548|dbj|BAB55295.1| unnamed protein product [Homo sapiens]
          Length = 238

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 92/225 (40%), Positives = 125/225 (55%), Gaps = 9/225 (4%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +   R HTS  ++ + P   + I + I+  D RIDT RASGAGGQHVNTTDSAV
Sbjct: 61  QRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAV 119

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--- 307
           RI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +   EEI     + K +IG   
Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--MHLEEEINKRQNARKIQIGSKG 177

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
              +IR+Y   P   V D R N         + GD  LD+ +++ 
Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221


>gi|114609867|ref|XP_001140527.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114609869|ref|XP_001140612.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 238

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 91/225 (40%), Positives = 124/225 (55%), Gaps = 9/225 (4%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +   R HTS  ++ + P   + I + I+  D RIDT RASGAGGQHVNTTDSAV
Sbjct: 61  QRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAV 119

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--- 307
           RI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +   EE      + K +IG   
Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--MHLEEETNKRQNARKIQIGSKG 177

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
              +IR+Y   P   V D R N         + GD  LD+ +++ 
Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221


>gi|328788515|ref|XP_001119866.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Apis mellifera]
          Length = 354

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 104/298 (34%), Positives = 161/298 (54%), Gaps = 17/298 (5%)

Query: 49  RQHLDNAISFI--KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +++L+  ++    ++ +  +  N  L  LA EE+   + Q    + Q + + ++Y   E 
Sbjct: 35  KKYLNYLMNAYQNEDERKGINGNEELKNLAKEEELTYMQQLLEIDEQILNIIIKYIDVEH 94

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
                 D  +  +E+  G GG E+  +A  LL MY ++     F  E LEI   E  G++
Sbjct: 95  -----YD--NIIMEIVPGVGGQEAMLFAKDLLNMYIKYFNHIGFNYEILEILSNELNGLR 147

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+LI   NA+  LK E GVHR+ RI   + + R HTS + + + P   D ++I++ + 
Sbjct: 148 KATVLISDNNAFKKLKYEGGVHRVQRIPATEKSGRLHTSTAVVTILPEPKD-VDIKLEDK 206

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  I++ +ASGAGGQHVNTTDSA+RITHIPTG +V CQ  RSQ KNK  A   L++ LYE
Sbjct: 207 DLIIESKKASGAGGQHVNTTDSAIRITHIPTGTIVTCQTNRSQIKNKQIALTKLKSLLYE 266

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
            EL K  +++ I +  K +IG      +IR+Y       V D R  N    +  + ++
Sbjct: 267 EELNK--QVSFINQIRKKQIGKRLRNEKIRTYNFN-QDRVTDHRIPNGTMYNLKEFME 321


>gi|307176123|gb|EFN65821.1| Peptide chain release factor 1-like, mitochondrial [Camponotus
           floridanus]
          Length = 412

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 95/338 (28%), Positives = 162/338 (47%), Gaps = 22/338 (6%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNAISFIKEIQDR 65
           + +    D+            +    + ++  ++     L+ +R HL   +  I+ +QD 
Sbjct: 60  DKIRRYLDYVTK-----EYKNEASKSNFFEFIDLKTVGHLLDDRTHL---VENIQNLQDL 111

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
              ++ + +LA EE+         + L  +   +      ++     DS    +E+ AG 
Sbjct: 112 AKQDVEMKKLAKEEE-----TLYKEQLNELDERLLDNILINICKESYDS--IIIEITAGV 164

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +   L  MY  +A+      E +++   +  GI+  ++L+ G   Y  L+ E 
Sbjct: 165 GGQEAMLFVKDLYEMYMGYAKYLDLTHEVIDMETNDNNGIRHVSILLSGDETY-KLQYEG 223

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ RI   + + R HTS +S+ + P     ++I I++ D +I+T RASGAGGQHVNT
Sbjct: 224 GVHRVQRIPATERSGRVHTSTASVAILPTPS-KVQIVINDKDLKIETKRASGAGGQHVNT 282

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRI ++P+G+ V CQ  RSQ KNK  A   LR+ LYE +L K+    +     +  
Sbjct: 283 TDSAVRIIYLPSGLSVSCQMHRSQIKNKEVAMIKLRSILYEQQLNKQTTFISELRQKQMG 342

Query: 306 I-GWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           +     ++R+Y       V D R  N    +  + + G
Sbjct: 343 MKSRNEKVRTYNYN-QDRVTDHRLQNGTMYNLPEFMQG 379


>gi|145627801|ref|ZP_01783602.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979576|gb|EDJ89235.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 174

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 71/167 (42%), Positives = 106/167 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ IK ++  L
Sbjct: 7   LQCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQALGKERVSLEQVVNTIKNLEQGL 66

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  +  GE D+ D Y+++ AG+G
Sbjct: 67  EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFGGEHDACDCYVDLQAGSG 126

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+  +
Sbjct: 127 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKSE 173


>gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos
           saltator]
          Length = 362

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 12/288 (4%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I+ +QD +  +  + +LA EE+         + L  +   +       +     D  
Sbjct: 53  VENIQNLQDLVKQDTEIKKLAEEEELV-----YKEQLDELDKNLLDIILADMCKECCD-- 105

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +  +E+ AG GG E+  +   L  MY  +AE      E L++   +  G ++ T+++ G 
Sbjct: 106 NIIIEITAGVGGQEAMLFVKNLYEMYIGYAEYLGLCHEVLDMDTTDCNGYRNVTIIVSGK 165

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 + E GVHR+ R+   +   R HTS +S+ + P+  + +EI I+E D +I+T RA
Sbjct: 166 QT-SKFRYEGGVHRVQRVPTTEKLGRVHTSTASVAILPIPSE-VEIVINERDLKIETKRA 223

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG+GGQHVN T+SAVRITHIPTG++V+CQ  RSQ +NK  A   LR  +YE +L K+   
Sbjct: 224 SGSGGQHVNKTNSAVRITHIPTGLIVECQVHRSQIRNKKLAMMRLRNMMYEQQLNKQTSF 283

Query: 296 ANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
            +     +  +G    ++R+Y       V D R  N    + S+ + G
Sbjct: 284 RSELRKKQIGMGFRNEKVRTYNYN-QDRVTDHRLQNGTFYNLSEFMQG 330


>gi|84996385|ref|XP_952914.1| peptide chain release factor [Theileria annulata strain Ankara]
 gi|65303911|emb|CAI76290.1| peptide chain release factor, putative [Theileria annulata]
          Length = 364

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 91/280 (32%), Positives = 139/280 (49%), Gaps = 39/280 (13%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR-----------KFKTEALEIHD 159
           + D N   L + +G GG+ES DW  +L  MY ++                 + + +++  
Sbjct: 81  KYDRNSCKLIIKSGVGGSESFDWCRILTEMYKKFISHYEPPDSDDNFPSSLRLKEVDVCP 140

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G   G +     + G  AY  LKGE G HRL+R SP++S ++R TSF S+ V P++ D+ 
Sbjct: 141 GSTGGFRRVEFDVIGDYAYRLLKGENGTHRLIRNSPFNSENKRQTSFGSVQVVPILSDTD 200

Query: 220 EIEIS--------ESDCRIDTYRASGAGGQHVNTTDSA--------------------VR 251
           E  ++        + D  I++ R+SG GGQ+VN  ++A                    VR
Sbjct: 201 EEVVNFKKNRQLLKKDLIIESMRSSGKGGQNVNKVETAGNLLFLKSIFTKSTIDIFVLVR 260

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG+ V+ QQER+  +N+  A  ML   + +  L+K  E  N  +       WG  
Sbjct: 261 VYHKPTGLSVKVQQERTNTQNREIAIRMLTKLVDQHYLKKLNEKVNEIKGEDLVGTWGSH 320

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y L P Q VKD RTN E +  ++VL+GDL  F+   L
Sbjct: 321 IRTYTLNPEQRVKDHRTNFETSKATNVLNGDLLPFILTYL 360


>gi|119625009|gb|EAX04604.1| hCG2025689 [Homo sapiens]
          Length = 238

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 90/225 (40%), Positives = 123/225 (54%), Gaps = 9/225 (4%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSEVGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +     HTS  ++ + P   + I + I+  D RIDT RASGAG QHVNTTDSAV
Sbjct: 61  QRVPKTEKQGCVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGEQHVNTTDSAV 119

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--- 307
           RI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +   EEI     + K +IG   
Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--MHVEEEINKRQNARKIQIGSKG 177

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
              +IR+Y   P   V D R N         + GD  LD+ +++ 
Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221


>gi|148703821|gb|EDL35768.1| mitochondrial translational release factor 1, isoform CRA_c [Mus
           musculus]
          Length = 436

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 159/352 (45%), Gaps = 33/352 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILL 73
           ++  +    L+   +   + +N  + + L R    L         I+E +  + +   L 
Sbjct: 81  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAG--AGG 127
           +   ++D+  + +  S+  Q I  ++     E L       + D +D  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D R+DT+RA GAGGQHVN
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPKDLRVDTFRARGAGGQHVN 317

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTD           +VV+CQQERSQ KNK  A  +LRA+LY  +    ++      + K 
Sbjct: 318 TTDR----------LVVECQQERSQLKNKEIALRVLRARLY--QQIIEKDRCQQQNARKL 365

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 366 QVGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 416


>gi|30694592|ref|NP_191278.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332646104|gb|AEE79625.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 406

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 78/325 (24%), Positives = 159/325 (48%), Gaps = 13/325 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL-EEDDCSILQETSDNL 92
            LW +  ++  ++ +      A+  +K+++ +  +  ++++L   +  D S+ ++  D+ 
Sbjct: 87  DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             +   + + +   LL  + D+  A + + +G+ G +SQ W   ++ MY +WAE+     
Sbjct: 147 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNA 206

Query: 153 EALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
              E       ++G+ SAT+  +   AYG+L GE+GVHRL+  S     S    S +   
Sbjct: 207 RVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLIISS----TSNEECSATVDI 262

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +   +  S + E+ E D  +          +     ++ V I HIP+GV +Q   ER++ 
Sbjct: 263 IPLFLRASPDFEVKEGDLIVSY-----PAKEDHKIAENMVCIHHIPSGVTLQSSGERNRF 317

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+ +A N L+AKL  +  +++    N  +S    +    + RSYV + ++MV D +T +
Sbjct: 318 ANRIKALNRLKAKLLVIAKEQKVSDVNKIDSKNI-LEPREETRSYVSKGHKMVVDRKTGL 376

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
           E      VLDG++   + A +++++
Sbjct: 377 EILDLKSVLDGNIGPLLGAHISMRR 401


>gi|312082910|ref|XP_003143641.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
 gi|307761198|gb|EFO20432.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
          Length = 384

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 15/315 (4%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----S 106
           HL+   +  +   D+L     L  L  E +D  I +    + +++ +E++    E     
Sbjct: 53  HLETVTTLARRFYDKLGMLTELDMLLKEGNDAEIQKIAKLDSEQLTVELDSIVNELTDVV 112

Query: 107 LLSGEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +   E DS N+  LE+  G GG E+  +A+ L  MY  +A+  K+K    ++      GI
Sbjct: 113 IPVTEYDSLNNCQLEIIPGVGGVEASLFASELAEMYHNYAQFMKWKWTPYQVDASPSGGI 172

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +SA + ++G  A+  L+ E GVHR+ R    D  +R HTS S + V P   + IE  ++ 
Sbjct: 173 RSAVVFVRGNGAFRALRYEAGVHRVQRFPVTD-KTRMHTSTSVVAVLPEP-EKIEACVTP 230

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D +++T RASG GGQ+VN   +AVR+TH  TG+ V C  ER+Q+ N   A+  L A L 
Sbjct: 231 ADVKVETMRASGPGGQNVNQRSTAVRLTHRETGIAVHCVDERTQYSNMEIAYKRLAAILL 290

Query: 286 ELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           + +L   E       S K ++G      ++R+Y  +  Q V D R        ++V+ G 
Sbjct: 291 QRKLD--ETQKQYSSSRKLQVGTKARAEKVRTYNFKDDQ-VIDHRLGKAWQGVANVMKGS 347

Query: 343 --LDDFMKATLAIKK 355
             LD  +++   + K
Sbjct: 348 SVLDQIIQSLDELSK 362


>gi|194387338|dbj|BAG60033.1| unnamed protein product [Homo sapiens]
          Length = 344

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 103/306 (33%), Positives = 145/306 (47%), Gaps = 50/306 (16%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRHAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 262

Query: 290 QKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EEI     + K +IG      +IR+Y   P   V D R N         + GD  LD
Sbjct: 263 HLEEEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLD 321

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 322 ELVQSL 327


>gi|332213669|ref|XP_003255947.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 3 [Nomascus leucogenys]
          Length = 344

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 102/306 (33%), Positives = 144/306 (47%), Gaps = 50/306 (16%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRHAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 262

Query: 290 QKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE      + K +IG      +IR+Y   P   V D R N         + GD  LD
Sbjct: 263 HLEEETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYLLD 321

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 322 ELVQSL 327


>gi|297604413|ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group]
 gi|255676317|dbj|BAF17292.2| Os05g0375600 [Oryza sativa Japonica Group]
          Length = 407

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 142/322 (44%), Gaps = 12/322 (3%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNL 92
           +LW N  ++   +         +  +K+++ +  +  ++ +L+  +  +  + ++     
Sbjct: 95  NLWDNPAKSHETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTS 154

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
                 ++  Q   LL G  D   A + V AG+           +  MY+ WA K+  K 
Sbjct: 155 VDATEFLDRYQMYKLLKGPYDKEGACIIVTAGSD--------ERIFCMYSSWARKQGCKD 206

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             +E        + +A + I+    +G L GE+G HR++  S  ++ +   TS     + 
Sbjct: 207 GLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAGTYEATSARVDIIP 266

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
             +D  + + + E+D  I    +      H N   SA+R+ HI TGV  +   ERS   N
Sbjct: 267 LFLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFAN 323

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           K +A + L+AKL  +  + R       +    E  + R+ R Y   P ++V DL T ++ 
Sbjct: 324 KMKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLVHDLNTGLQL 383

Query: 333 TSPSDVLDGDLDDFMKATLAIK 354
           +  + VLDGD+D F++  +  +
Sbjct: 384 SELNSVLDGDIDPFIRGRIVSR 405


>gi|114609865|ref|XP_001140693.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 4 [Pan troglodytes]
          Length = 344

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 101/306 (33%), Positives = 144/306 (47%), Gaps = 50/306 (16%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ I+ + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRHAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 262

Query: 290 QKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE      + K +IG      +IR+Y   P   V D R N         + GD  LD
Sbjct: 263 HLEEETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLD 321

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 322 ELVQSL 327


>gi|270289542|ref|ZP_06195844.1| peptide chain release factor 2 [Chlamydia muridarum Weiss]
          Length = 182

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 97/158 (61%), Positives = 119/158 (75%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           ++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQN 158


>gi|325278151|ref|ZP_08143660.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096726|gb|EGB95063.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 157

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 99/155 (63%), Positives = 120/155 (77%), Gaps = 1/155 (0%)

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH+PT
Sbjct: 1   SGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 60

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
             VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL
Sbjct: 61  NTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVL 120

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                +KDLRT +E++    VLDGDLD +++A+L 
Sbjct: 121 DDS-RIKDLRTGVERSDCQKVLDGDLDQYLEASLK 154


>gi|325067255|ref|ZP_08125928.1| peptide chain release factor 1 [Actinomyces oris K20]
          Length = 397

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 87/215 (40%), Positives = 118/215 (54%), Gaps = 9/215 (4%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA E++D     E            E+ +   +     DS D  +EV AG GG ES 
Sbjct: 173 ARELAAEDED--FAAEVPALEAAEAAACEHLREVLVPRDPDDSRDVIIEVKAGEGGEESA 230

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGE 184
            +A+ L RMY+R+AE++ +  E L+  D +  G K   L IK           +  LK E
Sbjct: 231 LFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKARGPVEPQDGVWAHLKYE 290

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P  DD  E++I  +D RID +R+SG GGQ VN
Sbjct: 291 GGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVN 350

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           TTDSAVRITH+PTG+VV  Q E+SQ +NK  A  +
Sbjct: 351 TTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRV 385


>gi|149050029|gb|EDM02353.1| rCG37077, isoform CRA_a [Rattus norvegicus]
          Length = 436

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 159/352 (45%), Gaps = 33/352 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +        L+   +D  + ++  + +   R    L   ++  +EIQ     + +   + 
Sbjct: 81  EGLNDEYQSLDQCLQD--ISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELESMC 138

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAG--AGG 127
           +   ++D+  + +  S+  Q I  ++     E L       + D ++  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           HR+ RI     +SR    HT   S+ V P   D +++++   D R+DT+RA GAGGQHVN
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP-DEVDVKVDPRDLRVDTFRARGAGGQHVN 317

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTD           +VV+CQQERSQ KNK  A  +LRA+LY  +    ++      + K 
Sbjct: 318 TTDR----------LVVECQQERSQLKNKEIALRVLRARLY--QQIIEKDKCQQQNARKL 365

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 366 QVGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 416


>gi|22135990|gb|AAM91577.1| putative protein [Arabidopsis thaliana]
 gi|30725574|gb|AAP37809.1| At3g57190 [Arabidopsis thaliana]
          Length = 372

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 78/325 (24%), Positives = 159/325 (48%), Gaps = 13/325 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL-EEDDCSILQETSDNL 92
            LW +  ++  ++ +      A+  +K+++ +  +  ++++L   +  D S+ ++  D+ 
Sbjct: 53  DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 112

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             +   + + +   LL  + D+  A + + +G+ G +SQ W   ++ MY +WAE+     
Sbjct: 113 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNA 172

Query: 153 EALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
              E       ++G+ SAT+  +   AYG+L GE+GVHRL+  S     S    S +   
Sbjct: 173 RVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLIISS----TSNEECSATVDI 228

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +   +  S + E+ E D  +          +     ++ V I HIP+GV +Q   ER++ 
Sbjct: 229 IPLFLRASPDFEVKEGDLIVSY-----PAKEDHKIAENMVCIHHIPSGVTLQSSGERNRF 283

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+ +A N L+AKL  +  +++    N  +S    +    + RSYV + ++MV D +T +
Sbjct: 284 ANRIKALNRLKAKLLVIAKEQKVSDVNKIDSKNI-LEPREETRSYVSKGHKMVVDRKTGL 342

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
           E      VLDG++   + A +++++
Sbjct: 343 EILDLKSVLDGNIGPLLGAHISMRR 367


>gi|297679454|ref|XP_002817545.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 344

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 102/306 (33%), Positives = 144/306 (47%), Gaps = 50/306 (16%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRQAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY   +
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYS--M 262

Query: 290 QKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
              EE      + K +IG      +IR+Y   P   V D R N         + GD  LD
Sbjct: 263 HLEEETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMRGDYLLD 321

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 322 ELVQSL 327


>gi|145362209|ref|NP_973706.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|330255694|gb|AEC10788.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 256

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 134/241 (55%), Gaps = 6/241 (2%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKL 97
             E     +E + L +++  I +++ +  +   L  L  E  DD  +L      L     
Sbjct: 16  PEEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVE 75

Query: 98  EVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           E +  Q   L       EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K +
Sbjct: 76  EEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFD 135

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++I + +  G K A+  I G + YG LK E G+HR+ RI   + + R HTS  S+ + P
Sbjct: 136 IVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILP 195

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
              D +++++   D RIDTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH ++
Sbjct: 196 QA-DEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMSQ 254

Query: 274 A 274
           +
Sbjct: 255 S 255


>gi|213403996|ref|XP_002172770.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000817|gb|EEB06477.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 312

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 137/275 (49%), Gaps = 11/275 (4%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADS--NDAYLEVHAGAGGTESQ 131
             +E D  +LQ        I  +          LLS + ++    A LEV AG GG+E+ 
Sbjct: 1   MNDESDKELLQLAESENNEIMKKTHDVLEGMHKLLSLKPNNYQAPALLEVRAGVGGSEAA 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A+ LL MY R+   R +K + L +   E   GI  A + + G + YG L  E GVHR+
Sbjct: 61  LFASELLSMYERYCAFRNWKWKPLSLSKTENGNGITEAIVSVSG-HVYGELFHEAGVHRV 119

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVNTTD 247
            R    ++  R HTS  S+ V P V+      E ++  +D R+D  RA GAGGQHVN T+
Sbjct: 120 QRTPATETKGRLHTSTVSVIVLPTVNSQTLETESKLDANDIRVDVMRAKGAGGQHVNRTE 179

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEI 306
           SAVR+THIP+G+ V  Q  RSQH+NK +A  +LR+++  L     +++  +      +  
Sbjct: 180 SAVRLTHIPSGITVCMQDSRSQHENKERALLILRSRVAALRHENLQKQQHDARRKQVSSP 239

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               +IR+Y       + D R +         ++G
Sbjct: 240 VRSEKIRTYNYA-QNRITDHRCSCSMYDTEGFMEG 273


>gi|164660096|ref|XP_001731171.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
 gi|159105071|gb|EDP43957.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
          Length = 395

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 95/327 (29%), Positives = 147/327 (44%), Gaps = 31/327 (9%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE---YK 102
            +  + L+         +++L        L   E D  +L+     L +++ E +     
Sbjct: 36  SQRIKDLEAVHKTWSAWREQLQCVQDTQRLCETEKDKDMLEMAEQELSQMRDEADARHEA 95

Query: 103 QFESLLSGEAD--SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR------------ 148
             + +LS      S  A +E+  G GG ES  +   +LRMY ++ E R            
Sbjct: 96  LKQQILSNSRSIQSKGAIMELRQGVGGQESCLFLGEMLRMYIKFCETRAQKAQDEDDPSM 155

Query: 149 ---KFKTEALEIHD-------GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
               + T+ L           G     + A L I GPNA+  L+ E GVHR+ RI    +
Sbjct: 156 LGAGWSTDLLSATPVDVSATSGAGDAYREAILQIHGPNAFEALRFEAGVHRVQRIPATQN 215

Query: 199 NSRRHTSFS--SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
             +  TS     +      +D  +  +   D R++T RA GAGGQHVN T+SAVR+TH P
Sbjct: 216 LGKLQTSTMAIIVLPMQAENDVSKDIVDSKDVRVETMRARGAGGQHVNRTESAVRLTHDP 275

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSY 315
           +G+ V  Q  RSQH+N+ +AW++LRA+L ++ LQK   E   +  S         ++R+Y
Sbjct: 276 SGITVSMQDSRSQHQNRVKAWDVLRARLLDIHLQKEASENRALRRSQVASAERSERVRTY 335

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              P   V D R  I  +     +DGD
Sbjct: 336 NF-PQDRVTDHRIGISLSDIHRFMDGD 361


>gi|195435374|ref|XP_002065668.1| GK14545 [Drosophila willistoni]
 gi|194161753|gb|EDW76654.1| GK14545 [Drosophila willistoni]
          Length = 397

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 159/317 (50%), Gaps = 12/317 (3%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  ++ +++   ++  L     L E   +ED   +++E +     +  + E    
Sbjct: 60  RLSQLEGVVNALEQRRVLERNLTSQKDL-EQEKDEDMRQLMEEENQVYTDLLAKQEQTML 118

Query: 105 ESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + LL+   D         V++GAGG E+  +A  L  MYT + E   +  E       + 
Sbjct: 119 QELLTLADDEVYPSLLFGVNSGAGGQEAMLFAQELYEMYTSYFEHMDWDYEEFARETTDI 178

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++ A +LI   +AY WL+ E GVHR+ R+   + + R HTS +SI V P   D +++ 
Sbjct: 179 GGLRHANILINDQDAYNWLRYEAGVHRVQRVPATEKSGRIHTSTASITVIPKPAD-VQVH 237

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
            +E D RI+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+A
Sbjct: 238 TAEKDLRIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNREVALKRLQA 297

Query: 283 KLYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
           +L + +L+  E       ++ +  +    +IR+Y       + D R  N    + +  L 
Sbjct: 298 RLVQQQLESSEATHLATKKAQQGSLNRNEKIRTYNF-VQDRITDHRIQNGTLHNLNGFLQ 356

Query: 341 G--DLDDFMKATLAIKK 355
           G   L   ++     ++
Sbjct: 357 GGEQLSGLIEKLQLEQR 373


>gi|297817036|ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322239|gb|EFH52660.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 409

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 77/328 (23%), Positives = 157/328 (47%), Gaps = 16/328 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL-EEDDCSILQETSDNL 92
            LW +  ++  ++ +       +  +K+++ +  +  ++++L   +  D S+ ++  D+ 
Sbjct: 87  DLWDDPAKSDEILLKLADRAKTVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRK 149
             +   + + +   LL+ + D+  A + + +G+   +SQD   W   ++ MY +WAEK  
Sbjct: 147 LDVSRSLHHYEMSKLLTDQYDAEGACMIIKSGSQDAKSQDLQIWTEQVVSMYIKWAEKLG 206

Query: 150 FKTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
                 E       ++G+ SAT+  +   AYG+L GE+GVHRL+  S     S    S +
Sbjct: 207 QNARVAEKCSFLSNKSGVNSATIEFEFDFAYGYLLGERGVHRLIISS----TSSEECSAT 262

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
              +   +  S + E+ E D  +          ++    ++ V I HIP+G+ V+   ER
Sbjct: 263 VDIIPLFLRASPDFEVKEDDLIVSY-----PAKENHKIAENMVSIQHIPSGITVESSGER 317

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           ++  N+ +A N L+AKL  +  +++    N   S      W  + R YV +  +MV D +
Sbjct: 318 NRFANRIKALNRLKAKLLVIAKEQKISDVNKINSKNILKPW-EETRRYVSKGQKMVVDTK 376

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           T +E      VLDG++   + A +++++
Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404


>gi|6735298|emb|CAB68125.1| putative protein [Arabidopsis thaliana]
          Length = 409

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/328 (24%), Positives = 160/328 (48%), Gaps = 16/328 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL-EEDDCSILQETSDNL 92
            LW +  ++  ++ +      A+  +K+++ +  +  ++++L   +  D S+ ++  D+ 
Sbjct: 87  DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRK 149
             +   + + +   LL  + D+  A + + +G+ G +SQD   W   ++ MY +WAE+  
Sbjct: 147 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQDLQIWTEQVVSMYIKWAERLG 206

Query: 150 FKTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
                 E       ++G+ SAT+  +   AYG+L GE+GVHRL+  S     S    S +
Sbjct: 207 QNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLIISS----TSNEECSAT 262

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
              +   +  S + E+ E D  +          +     ++ V I HIP+GV +Q   ER
Sbjct: 263 VDIIPLFLRASPDFEVKEGDLIVSY-----PAKEDHKIAENMVCIHHIPSGVTLQSSGER 317

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           ++  N+ +A N L+AKL  +  +++    N  +S    +    + RSYV + ++MV D +
Sbjct: 318 NRFANRIKALNRLKAKLLVIAKEQKVSDVNKIDSKNI-LEPREETRSYVSKGHKMVVDRK 376

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           T +E      VLDG++   + A +++++
Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404


>gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462]
          Length = 198

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 3/190 (1%)

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              ++I G N Y  LK E G HR+ R+   +S  R HTS +++ V P   D ++++I   
Sbjct: 2   EVVVMITGDNVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMPE-YDEVDLKIDPK 60

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R D YR+SGAGGQHVN T SAVR+THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y+
Sbjct: 61  DIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYD 120

Query: 287 L-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
             E + +E+     +++        +IR+Y   P   V D R  +       +++G+LD+
Sbjct: 121 YYETENQEKYDQNRKNAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDE 179

Query: 346 FMKATLAIKK 355
            + A +   +
Sbjct: 180 IIDALIVHDQ 189


>gi|121727222|ref|ZP_01680389.1| peptide chain release factor 1 [Vibrio cholerae V52]
 gi|121630467|gb|EAX62860.1| peptide chain release factor 1 [Vibrio cholerae V52]
          Length = 193

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 80/181 (44%), Positives = 116/181 (64%), Gaps = 6/181 (3%)

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  AYG LK E G HR+ R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+
Sbjct: 1   GDGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTF 60

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR 
Sbjct: 61  RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR- 119

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             A I ++ +  +G G    +IR+Y   P   V D R N+     ++V++GD+   +   
Sbjct: 120 -AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPV 177

Query: 351 L 351
           +
Sbjct: 178 I 178


>gi|159900504|ref|YP_001546751.1| ATPase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893543|gb|ABX06623.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1027

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 76/353 (21%), Positives = 142/353 (40%), Gaps = 17/353 (4%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +L  +L  L    +   A +R + L  +   P  W +  +A+ L+ E  ++   +    +
Sbjct: 685  QLHNRLKHLIKQLNVVEARERQTELMDEMSSPSFWDDHEQAQFLLTELSNVARRVGRCDD 744

Query: 62   IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++    D   LL+   E ++  +  E     +R++ ++ + + E L S   D +DAY+ +
Sbjct: 745  LRRLYDDADQLLQRIRERNERRLFPELMRMAKRLERDLRFAELEMLFSNPEDWHDAYIIL 804

Query: 122  HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             +   G     W   L   Y  W+  ++F+ + ++    E   +   TL I G  A+G L
Sbjct: 805  ESDQAGL---RWVRNLANAYLEWSLGKRFEAKVIDETPAE-DNLIRVTLQISGSGAFGLL 860

Query: 182  KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
            + E G HR   IS      R  T  + + +  +   + +     S         + A G 
Sbjct: 861  RSEAGTHR---ISETGGEPRLKT-VTQVQITVLPVPTEDTPAPASSDIEMAVMNTRADGY 916

Query: 242  HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
             +       R  H  +G              +A    +L   L  L +++ ++       
Sbjct: 917  FLRKLRVTGRAIHRYSGAAAFA----CAGSERAVREMLLSILLGRLAMKQLDD-----FI 967

Query: 302  SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              ++  WG  +RSY L     +KD RT I  T+P   L G+LD F++A L  +
Sbjct: 968  QPSDDAWGSVVRSYHLGKRSTIKDPRTEIVHTNPKAALAGELDLFIEAALRWR 1020


>gi|302820744|ref|XP_002992038.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
 gi|300140160|gb|EFJ06887.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
          Length = 654

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 82/199 (41%), Positives = 121/199 (60%), Gaps = 4/199 (2%)

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
              GEEAGIKSATL I G  AYG++ GE+G HRLVR  P++S   R TSF+ + V  V  
Sbjct: 116 SSPGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQLPFNSKGLRQTSFAGVEVMHVRT 175

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
                +  ++       R+ G GGQ+VN  ++AVR+THIPTG+ ++C ++RSQ +NK +A
Sbjct: 176 KLNSTQPGQATL----CRSGGKGGQNVNMVETAVRVTHIPTGIALRCSEKRSQLQNKIKA 231

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
             +L++KL  +   +R            +  WG+QIR+YV  PY++V DLRTN+E +  S
Sbjct: 232 IVLLKSKLLVILEDQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYKLVMDLRTNVETSDIS 291

Query: 337 DVLDGDLDDFMKATLAIKK 355
            ++DG L+  + A L  K+
Sbjct: 292 GIMDGKLEPLLTAYLMSKQ 310



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           DLRTN E +  S ++ G+L+  + A L  K+
Sbjct: 81  DLRTNTETSDISVIMGGNLEPLLTAYLMSKQ 111


>gi|330802966|ref|XP_003289482.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
 gi|325080440|gb|EGC33996.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
          Length = 226

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 80/214 (37%), Positives = 125/214 (58%), Gaps = 5/214 (2%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY  + E++ +K E LE    E  G +  T+ I G   +G+LK E GVHR+ R+   ++ 
Sbjct: 1   MYRNYCEQKGWKFETLESQSSEVGGFRDCTISISGKGVFGFLKYESGVHRVQRVPDTETQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P   + ++++I + D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+
Sbjct: 61  GRIHTSTITVAILPEPKE-VDLQIHDRDIKVDVFRSSGNGGQSVNTTDSAVRMTHLPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQ 318
           VVQ Q ERSQ +N+A+A  +LRA++YE E Q+   E      S         +IR+Y   
Sbjct: 120 VVQMQDERSQLQNRAKALKILRARVYEQERQRLHSERERERNSQIGNATRSERIRTYNY- 178

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           P   + D R +I   + S  ++ + L+ F+   L
Sbjct: 179 PQDRITDHRVSI-NGNLSSCMEEEGLEGFIDEIL 211


>gi|291533125|emb|CBL06238.1| Protein chain release factor B [Megamonas hypermegale ART12/1]
          Length = 182

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 100/158 (63%), Positives = 128/158 (81%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWAE+  F  E  ++  G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D+N
Sbjct: 1   MYGRWAERNGFSVETADLLPGDEAGVKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDAN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           SRRHTSFS+  V P +DD +E++I+ +D R+DTYRASGAGGQH+N TDSAVR+THIPTGV
Sbjct: 61  SRRHTSFSACDVMPEIDDDVEVDINMADVRVDTYRASGAGGQHINKTDSAVRMTHIPTGV 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           V QCQ ERSQ +N+ Q   +LRA+L+ELE++K+E+   
Sbjct: 121 VAQCQSERSQLQNREQCLRLLRARLFELEMEKKEKNLQ 158


>gi|213581389|ref|ZP_03363215.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 197

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 2/183 (1%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D R
Sbjct: 1   AKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLR 60

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E 
Sbjct: 61  IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAET 120

Query: 290 QKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            KR++       +    G    + R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 121 AKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 179

Query: 349 ATL 351
             +
Sbjct: 180 PIV 182


>gi|294994856|ref|ZP_06800547.1| peptide chain release factor 1 [Mycobacterium tuberculosis 210]
          Length = 206

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 81/200 (40%), Positives = 113/200 (56%), Gaps = 7/200 (3%)

Query: 162 EAGIKSATLLIKG-----PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             G K ATL I          +  +K E GVHR+ R+   +S  R HTS + + VYP  +
Sbjct: 1   MGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPE 60

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           +  +++I ESD RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A
Sbjct: 61  EVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRA 120

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
             +L A+L  +  ++    A+   +S+   +    +IR+Y   P   + D R   +  + 
Sbjct: 121 LQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNL 179

Query: 336 SDVLDGDLDDFMKATLAIKK 355
             VLDGDLD    A  A  K
Sbjct: 180 DQVLDGDLDALFDALSAADK 199


>gi|194705206|gb|ACF86687.1| unknown [Zea mays]
 gi|195648693|gb|ACG43814.1| hypothetical protein [Zea mays]
          Length = 230

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 8/219 (3%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E+  +K + +   + E  G K+  + +KG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 61  GRVHTSTATVAIMPEA-DEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ERSQ +N+ +A+ +LRAKLYE++L  RE+  ++    K ++G G    +IR+Y 
Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKL--REQQESLRNQRKLQVGTGARSEKIRTYN 177

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +    V D R  +     +  L GD++  +++   +++
Sbjct: 178 YKD-NRVTDHRLKM-NFELTSFLLGDIESAIQSCATMEQ 214


>gi|322801718|gb|EFZ22324.1| hypothetical protein SINV_03599 [Solenopsis invicta]
          Length = 300

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 88/276 (31%), Positives = 142/276 (51%), Gaps = 13/276 (4%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           ++ + +LA EE+           L  +   +      ++     DS    +E+ AG GG 
Sbjct: 3   DIEMKKLAEEEE-----ALYKGQLNELDERLLDIVLANMYKDFYDS--IIIEITAGVGGQ 55

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L  MY  +A+      E +++   +  GI+  +++I G       + E GVH
Sbjct: 56  EAMLFVKDLYDMYLGYAKYLDLDHEIIDMEVTDNKGIRHVSVIISGNQVD-KFQHEGGVH 114

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +  SR HTS +S+ + PV  + I+I I+E D +I+T R+SGAGGQHVNTTDS
Sbjct: 115 RVQRVPATERLSRVHTSTASVAILPVPSE-IQIMINEKDLKIETKRSSGAGGQHVNTTDS 173

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AVRITH+P+GV V C+  RSQ KN+  A + L++ LYE +L K+    +     +  +G 
Sbjct: 174 AVRITHLPSGVSVTCEVHRSQDKNRKMAMDKLKSVLYERQLNKQTSFTSELRQKQMGMGF 233

Query: 308 WGRQIRSYVLQPYQMVKDLRTNI--EKTSPSDVLDG 341
              +IR+Y       V D R        + ++ + G
Sbjct: 234 RNEKIRTYNYN-QDRVTDHRLGQNGTLYNLAEFMQG 268


>gi|302672683|ref|XP_003026029.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
 gi|300099709|gb|EFI91126.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
          Length = 251

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 11/243 (4%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-KG 174
            A LE+  G GG E   +   L RMYTR+A +  ++   +   + E  G++   + + KG
Sbjct: 4   GALLELKPGVGGAEGALFCVDLERMYTRYAAEHGWQLTPVNRSETESGGLREVLMEVRKG 63

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD---SIEIEISESDCRID 231
               G    E G HR+ RI   +S+ R HTS +S+ V P+V++   +        D RI+
Sbjct: 64  K---GRGDFESGAHRVQRIPATESSGRVHTSTASVLVLPLVEEGTPTTTPLFKMEDVRIE 120

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
             RA GAGGQHVN T+SAVR+THIPTG+VV  Q ERSQH N+ +A+ +L ++L    L +
Sbjct: 121 VMRARGAGGQHVNKTESAVRLTHIPTGIVVAMQDERSQHVNRRRAFTVLTSRLLAQRLVQ 180

Query: 292 REEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKA 349
             E      +S    +    +IR+Y   P   + D R  +   +   V++G  L+  ++A
Sbjct: 181 EAEDRRKRRNSLVSGVDRSDKIRTYNW-PQSRITDHRIGMSV-NLEPVMEGHGLETLIRA 238

Query: 350 TLA 352
             A
Sbjct: 239 LAA 241


>gi|71008811|ref|XP_758238.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
 gi|46097913|gb|EAK83146.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
          Length = 526

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 91/356 (25%), Positives = 163/356 (45%), Gaps = 39/356 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              QRL  L           + +++  + ++ + LD       +   +    +  + ++ 
Sbjct: 138 EKRQRLLELT----------DGVDSADIGKQLKELDPLRQAWDKFSAKRKQLISTISISQ 187

Query: 78  EEDDCSILQETSDNLQRI-------KLEVEYKQFESLLSG-EADSNDAYLEVHAGAGGTE 129
            + D  +    S+ +  +       + +++    ES+    EA +  A LEV  G GG E
Sbjct: 188 NDPDEDMRALASEEILLLEEELLELRSDMQELILESVTDPIEAKAVGAVLEVRPGVGGQE 247

Query: 130 SQDWANMLLRMYTRWAEKR--------KFKTEA--------LEIHDGEEAGIKSATLLIK 173
           S  +   + RMY R+ E++        +++ E              G  +G+K A + +K
Sbjct: 248 STLFTAEVARMYQRFCEQKPVEEDGSGEWQVEMLSSTSVDVSTSSSGSGSGLKEAIIEVK 307

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDCRI 230
           G   +  LK E GVHR+ RI    S  +  TS  ++ V P+ + S    +  +   D ++
Sbjct: 308 GKGVFKKLKYEAGVHRVQRIPSTQSLGKLQTSTIAVMVLPISEGSEHKADDLVDPKDVKV 367

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +  R+ GAGGQHVN T+SA+R+TH PTG+ V  Q  RSQH+N+ +AW +LRA+L +  L+
Sbjct: 368 EVMRSRGAGGQHVNKTESAIRLTHEPTGISVSMQDSRSQHQNRTKAWAVLRARLLDRRLK 427

Query: 291 KREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +  E       +    +    ++R+Y   P   V D R N+       +++G+ D 
Sbjct: 428 QEVEGNRERRLAQVASMDRSDRVRTYNF-PQDRVTDHRINLSLNGIDAIMEGEHDP 482


>gi|225685111|gb|EEH23395.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb03]
          Length = 316

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 26/275 (9%)

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  + +  E  +   +           LE+  GAGG E+  +AN LLRMYT +   R  +
Sbjct: 1   MASLSVLSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIFANELLRMYTMFCANRGLR 60

Query: 152 T-------EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
                   E      G E  +  A + I+ P +Y  L+ E GVHR+ R+   +S  R HT
Sbjct: 61  ATLLKKESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAGVHRVQRVPATESKGRTHT 120

Query: 205 SFSSIWVYPVVD--------------DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           S  S+ + P                  + +  I   +  ++  RASGAGGQHVN T+SA+
Sbjct: 121 SAVSVVILPSFPRNGEEGDGELNFDDPNSDFYIDPQEVNVEKMRASGAGGQHVNKTESAI 180

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEI 306
           R+THIPTG+VV  Q  RSQH+N+ +AW +LRA++ +   + RE    ++         ++
Sbjct: 181 RLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRRGAMGGVGKM 240

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           G G +IR+Y         D R+ +   +  ++++G
Sbjct: 241 GRGDKIRTYNFG-QNRCTDHRSGLTLHNLVNIMEG 274


>gi|324506204|gb|ADY42656.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 376

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 11/306 (3%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLL 108
            N ++  KE   R  + L L  L   E D  +     +    ++ E+           + 
Sbjct: 51  QNLLTLSKEFIMRRDELLQLNALMSAESDVELETMARNERVLLESELNDLARNIVDAVMP 110

Query: 109 SGEADSND-AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
             E D      LEV AG GG E+  + + L+ MY  +A  + +    ++  + +  G++S
Sbjct: 111 RTELDVLSKCQLEVTAGVGGIEAMLFTSELVDMYRNFAAFKGWTWTVMQQDNIQLGGVRS 170

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           A + + G  AYG L+ E GVHR+ R+   D  +R HTS +S+ V P   + ++  +  + 
Sbjct: 171 ALIAVSGDEAYGRLRFEAGVHRVQRMPITD-KTRMHTSTASVSVLPEP-EKVDAYVPSNS 228

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            +I+T RASG GGQ+VN   +AVR+TH  +G+ V C  ER QH N   A+  L A L + 
Sbjct: 229 VKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQHLNIQIAFRRLAAILMQE 288

Query: 288 ELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLD 344
           ++ +  E+ A   +          ++R+Y  +    V D R     +  +DV+ G  +LD
Sbjct: 289 KMDRIYEKSAAARKLQVGSKARAEKVRTYNFKD-DRVTDHRLKKSWSRVTDVMRGGHELD 347

Query: 345 DFMKAT 350
             +   
Sbjct: 348 AIINEL 353


>gi|218297203|ref|ZP_03497865.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
 gi|218242480|gb|EED09019.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
          Length = 176

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 86/164 (52%), Positives = 110/164 (67%), Gaps = 1/164 (0%)

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +R SP+D++ RRHTSF+ + V P VDD++E+ I   D RID +R+ G GGQ VNTTDSAV
Sbjct: 1   MRPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAV 60

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V CQ  RSQ KNK  A  +LR++L+ELE +K++E           I WG 
Sbjct: 61  RIVHLPTGITVTCQTTRSQIKNKELALKVLRSRLFELEWKKKQEELQKLRGEVRPIEWGS 120

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYVL   Q VKD RT + +  P +VLDGDL DF+ A L  K
Sbjct: 121 QIRSYVL-DKQYVKDHRTGLMRFDPQNVLDGDLMDFIWAGLEWK 163


>gi|326520682|dbj|BAJ92704.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 125/220 (56%), Gaps = 8/220 (3%)

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+ E   +K + +   + E+ G K+  + +KG   Y  LK E GVHR+ R+   ++
Sbjct: 7   RMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTET 66

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ + P   D +++ I   D  +   R+ GAGGQ+VN  ++A+ + H PTG
Sbjct: 67  MGRVHTSTATVAIMPEA-DEVDVVIDPKDIELKAARSGGAGGQNVNKVETAIDLIHKPTG 125

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + + C +E+SQ +NK +A+ +LRAKLYE++L  RE+  +I      ++G G    +IR+Y
Sbjct: 126 IRIFCTEEKSQLQNKERAFQLLRAKLYEIKL--REQQESIRTQRLLQVGTGARSEKIRTY 183

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +    V D R  +     S  L GD++  +++  A+++
Sbjct: 184 NYKD-NRVTDHRLKM-NFILSSFLLGDIESAIQSCAALEQ 221


>gi|297291498|ref|XP_001095577.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 2 [Macaca mulatta]
          Length = 326

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 99/278 (35%), Positives = 132/278 (47%), Gaps = 49/278 (17%)

Query: 84  ILQETSDNLQRIKLEVE------YKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135
           +L +    L+  +  +       Y Q   LL  S E D ND  LEV AG GG        
Sbjct: 70  LLNQKEQELRETEPLLHGGVIFLYLQIILLLVPSEETDENDLILEVTAGVGG-------- 121

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
                                       G++ A+  I G  AY  +K E GVHR+ R+  
Sbjct: 122 ----------------------------GLRHASASIGGSEAYRHMKFEGGVHRVQRVPK 153

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +   R HTS  ++ + P   + I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+
Sbjct: 154 TEKQGRIHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHL 212

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRS 314
           PTGVV +CQQERSQ KN+  A   LRAKLY + L+K   +  N  +      G   +IR+
Sbjct: 213 PTGVVSECQQERSQLKNRELAMKKLRAKLYSMHLEKEANKTQNARKIQIGSKGRSEKIRT 272

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
           Y   P   V D R +         + GD  LD+ +++ 
Sbjct: 273 YNF-PQNRVTDHRISKTLHDLETFMQGDYLLDELVQSL 309


>gi|194699680|gb|ACF83924.1| unknown [Zea mays]
          Length = 174

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 82/162 (50%), Positives = 114/162 (70%), Gaps = 1/162 (0%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              LLSG  D   A + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEA
Sbjct: 1   MTQLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEA 60

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIE 222
           GIKSAT+ ++G  AYG+L GE+G HR+VR SP+++   R TSF+ + V P + ++S+ ++
Sbjct: 61  GIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVD 120

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           I E D  I   RA G GGQ+VN  ++AVR+ HIPTG+ V+C 
Sbjct: 121 IPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCS 162


>gi|224001842|ref|XP_002290593.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
 gi|220974015|gb|EED92345.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
          Length = 282

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 94/272 (34%), Positives = 147/272 (54%), Gaps = 25/272 (9%)

Query: 92  LQRIKLEVEYKQFESLLS-----GEAD-----SNDAYLEVHAGAGGTESQDWANMLLRMY 141
           L ++K ++E    + LLS        D     S+DA +++ AG GG E+  +A+ +L  Y
Sbjct: 14  LSQLKEQLEPLSQKMLLSLVPVLNPDDLQDLTSSDAVIDIRAGTGGDEACLFASEILACY 73

Query: 142 TRWAEK----------RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
              A+           + +  E L +   +  GIK A+L++K    YG+ + E GVHR+ 
Sbjct: 74  EATAKAGGADESGNGGKSWDLEFLSLSRTDLGGIKEASLILKQLGPYGFFQYESGVHRVQ 133

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   D  ++  TS  S+ V P V DS+  E +  ++ +I+T RASGAGGQHVNTT+SAV
Sbjct: 134 RVPVND--NKLQTSAVSVAVLPSVPDSLIAEALPPTELKIETMRASGAGGQHVNTTESAV 191

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WG 309
           R+THIPTG++   Q+ERSQHKNKA+A  ++ +++Y L  ++  +  +   SS    G   
Sbjct: 192 RVTHIPTGIMAYMQEERSQHKNKAKALKLVASRVYALRKEQERKNRSAARSSLMGGGDRS 251

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   + D R  +        L G
Sbjct: 252 ERIRTYNF-PQDRITDHRCKVSVQGVQSWLGG 282


>gi|255641350|gb|ACU20952.1| unknown [Glycine max]
          Length = 230

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 74/219 (33%), Positives = 128/219 (58%), Gaps = 8/219 (3%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R++E+  +K   +     E+ G K+  + IKG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++A+ + H PTG+
Sbjct: 61  GRVHTSTATVAIMPEA-DEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ER+Q KN+ +A+ +LRAKLYE+++  RE+  ++    K ++G G    +IR+Y 
Sbjct: 120 RIFCTEERTQLKNRNRAFQLLRAKLYEIKV--REQQESLRNQRKLQVGTGARSEKIRTYN 177

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +    V D R  I     +  LDGD++D +++ + +++
Sbjct: 178 YKD-NRVTDHRLKI-NYELTSFLDGDIEDAVQSCVTMEQ 214


>gi|156094764|ref|XP_001613418.1| peptide chain release factor [Plasmodium vivax SaI-1]
 gi|148802292|gb|EDL43691.1| peptide chain release factor, putative [Plasmodium vivax]
          Length = 334

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 36/274 (13%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE----KRKFKTEALEIHDGEEAGIK 166
           +   N   L + +G GGTE+ D+ +ML  MY ++      K+  K E +++   E  GIK
Sbjct: 59  KYFKNSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVIDLSKNEV-GIK 117

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI------- 219
              + I G  ++     E+G+HR+VR SP+++ +++ TSF  + V P +  +        
Sbjct: 118 KVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINFL 177

Query: 220 ----------------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
                                 EI +++SD  I T R+ G GGQ+VN  ++AVRI H PT
Sbjct: 178 NIAESSSPSVKKNMNSRNINVNEIALNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPT 237

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            + V+   ERSQ  NK  A   +  KL  L+L +  +      S+K+   +G QIR+Y+L
Sbjct: 238 NISVKVSSERSQILNKRIALKTIYEKLLYLQL-EALKNKKYEFSNKSLTHFGEQIRNYIL 296

Query: 318 QPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350
              +M+KD RTN+  T    VL  G+++ F+ A 
Sbjct: 297 YGNKMIKDTRTNVSSTDVDRVLSQGEIELFVDAY 330


>gi|221051906|ref|XP_002257529.1| peptidyl-trna hydrolase [Plasmodium knowlesi strain H]
 gi|193807359|emb|CAQ37864.1| peptidyl-trna hydrolase, putative [Plasmodium knowlesi strain H]
          Length = 334

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 36/274 (13%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE----KRKFKTEALEIHDGEEAGIK 166
           +   N   L + +G GGTE+ D+ +ML  MY ++      K+  K E +++   E  GIK
Sbjct: 59  KYFKNSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVMDLSKNEV-GIK 117

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI------- 219
              + I G  ++     E+G+HR+VR SP+++ +++ TSF  + V P +  +        
Sbjct: 118 KVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINFL 177

Query: 220 ----------------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
                                 EI +++SD  I T R+ G GGQ+VN  ++AVRI H PT
Sbjct: 178 NIAESSSTPVKKTLNSRNINVNEIPLNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPT 237

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            + V+   ERSQ  NK  A   +  KL  L+L +  +      S+K+   +G QIR+Y+L
Sbjct: 238 NISVKVSSERSQILNKRIALKTIYEKLLYLQL-EALKNKKYEFSNKSLTHFGEQIRNYIL 296

Query: 318 QPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350
              +M+KD RTN+  T    VL  G+++ F+ A 
Sbjct: 297 YGNKMIKDTRTNVFSTDVDRVLSQGEIELFVDAY 330


>gi|294623963|ref|ZP_06702760.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601738|gb|EFF45678.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 178

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 85/145 (58%), Positives = 109/145 (75%), Gaps = 1/145 (0%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RS
Sbjct: 1   MFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 60

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT
Sbjct: 61  QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVL-DQSRIKDLRT 119

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
            IE++    VLDGDLD+F++A+L  
Sbjct: 120 GIERSDTQKVLDGDLDEFVEASLKA 144


>gi|297304301|ref|XP_001086824.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like,
           partial [Macaca mulatta]
          Length = 346

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 97/310 (31%), Positives = 140/310 (45%), Gaps = 48/310 (15%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            R  L   I  + E +  L +   LL     +++  + +   + +   + E+   + + +
Sbjct: 61  RRPELAAVIKLLNEKEQELRETEPLL----HDENEDLRKLAENEITLCQKEITQLKHQII 116

Query: 108 L----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
           L    S E D N             E QD                       E    E  
Sbjct: 117 LLLVPSEETDEN-------------ELQDL----------------------EYFPSEIG 141

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A+  I G  AY  +K E GVHR+ R+       R HTS  ++ + P   + I + I
Sbjct: 142 GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTQKQGRIHTSTMTVAILPQPTE-INLVI 200

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +  D RIDT +ASGAGGQHVNTTDSAVRI H+PT VV +CQQERSQ KN+  A   LRAK
Sbjct: 201 NPKDLRIDTKQASGAGGQHVNTTDSAVRIVHLPTSVVSKCQQERSQLKNRELAMTKLRAK 260

Query: 284 LYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           LY + L+K   +  N  +      G   +IR+Y   P   V D R +         + GD
Sbjct: 261 LYSMHLEKETNKRQNARKIRIGSKGRSEKIRTYNF-PQNRVTDHRISKTLHDLETFMQGD 319

Query: 343 --LDDFMKAT 350
             LD+ +++ 
Sbjct: 320 DLLDELVQSL 329


>gi|313636342|gb|EFS02127.1| peptide chain release factor 2 [Listeria seeligeri FSL S4-171]
          Length = 142

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 82/140 (58%), Positives = 101/140 (72%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ 
Sbjct: 1   LDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNRD 60

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E  +
Sbjct: 61  QAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGN 120

Query: 335 PSDVLDGDLDDFMKATLAIK 354
              V+DGDLDDF+ A L  +
Sbjct: 121 IQAVMDGDLDDFINAYLRSR 140


>gi|198421557|ref|XP_002128173.1| PREDICTED: similar to mitochondrial translational release factor
           1-like [Ciona intestinalis]
          Length = 432

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 76/292 (26%), Positives = 142/292 (48%), Gaps = 11/292 (3%)

Query: 59  IKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGE--A 112
           ++ + +RL D   + +L+ E + D  + +ET    + ++ E+   +    ESL++ +   
Sbjct: 110 VETLNERLHDLGEIEKLSKEFKSDEEMFKETEIERRSLEDEISEIKTSIVESLVTDKDSE 169

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA-TLL 171
           D++ A LEV  G GG E+  +A  +  MY ++  +  +  + +E   GE   +  A  ++
Sbjct: 170 DNDGAVLEVTPGIGGVEAAMFATEIFDMYQKFCHRSGYDLDVVEYDMGENGALVKANAVV 229

Query: 172 IKGP-NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
             G   AY   K E G+HR+ R+   + + R HTS  S+ V P  ++ I   +   D +I
Sbjct: 230 SSGDGYAYSLFKHEAGIHRVQRVPKTEKSGRLHTSTVSVAVLPKSNE-ILPPLQRKDLKI 288

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELEL 289
              ++SG GGQH N+T S   + HIPTG +V+ ++ R Q  N  +A   L   ++ E   
Sbjct: 289 TFSKSSGHGGQHANSTLSCAVVCHIPTGNIVRVEETRCQKTNLDRAQQKLTHIVHSEAMK 348

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            K+ ++ ++            +IR+Y    +  + D R  +  +   + L+G
Sbjct: 349 AKQAQVNSVRRKQTRSRERSDKIRTYNFH-HSRITDHRIGVTLSGIEEFLNG 399


>gi|56203458|emb|CAI18897.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 231

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 97/252 (38%), Positives = 123/252 (48%), Gaps = 45/252 (17%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              + S E D ND  LEV AG GG                                    
Sbjct: 3   LLLVPSEETDENDLILEVTAGVGG------------------------------------ 26

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I
Sbjct: 27  GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVI 85

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAK
Sbjct: 86  NPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAK 145

Query: 284 LYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           LY   +   EEI     + K +IG      +IR+Y   P   V D R N         + 
Sbjct: 146 LYS--MHLEEEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQ 202

Query: 341 GD--LDDFMKAT 350
           GD  LD+ +++ 
Sbjct: 203 GDYLLDELVQSL 214


>gi|169838094|ref|ZP_02871282.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division
           TM7 single-cell isolate TM7a]
          Length = 190

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 85/172 (49%), Positives = 119/172 (69%), Gaps = 2/172 (1%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           M+TR+AE+ ++KTE +E ++    G+K  T LIKG  AY  LK E GVHR+ R+   +S+
Sbjct: 1   MFTRYAERNRWKTEIIEKNEIGVGGLKEVTFLIKGHGAYSRLKFESGVHRVQRVPATESS 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P +DD  E+EI+ SD +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+
Sbjct: 61  GRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGL 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           VV  Q  RSQ KNK  A  +L +KLYE+E    ++ + +    ++++G G +
Sbjct: 121 VVTSQDGRSQIKNKEAAMKVLVSKLYEME--CEKQRSAVENERRSQVGSGDR 170


>gi|315926256|ref|ZP_07922444.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315620443|gb|EFV00436.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 173

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 92/170 (54%), Positives = 119/170 (70%), Gaps = 2/170 (1%)

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVRISP+D+  RR TSF+ + V PVV+++  ++I  SD R+D + ASG GGQ VNT
Sbjct: 1   GTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPGSDLRVDVFHASGPGGQGVNT 60

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL  LE  + E+ A +       
Sbjct: 61  TDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLKSEG 118

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 119 NSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 168


>gi|20799561|gb|AAM28548.1|AF494518_1 peptide releasing factor 1 [Tomato big bud phytoplasma]
          Length = 269

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 19/275 (6%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKM--LMRERQHLDNAISFIKEIQDRLCDN 69
           +FD  +   ++      K  +     N    +   L++E   L   +   +E      + 
Sbjct: 1   MFDKLELIKKKYLQNQKKILE-----NPKNFQNINLLKEMNKLQKIVFAYEEYIQLKKEY 55

Query: 70  LILLELALEEDD----CSILQETSDNLQRIKLEVEYK--QFESLL-SGEA---DSNDAYL 119
             + +   + +D      I+Q        + ++++ K  Q E LL   +    D  D  +
Sbjct: 56  KTIQKTLSQXNDKILEEEIIQLAEXEKNNLIIKIKXKTNQLEKLLYPDQYNAEDKQDVIV 115

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+  G GG E+  + + L R Y ++ E +K+K E + +    + GI S   +I G N + 
Sbjct: 116 EIKKGIGGQEANLFVSDLFRAYKKYIEYKKWKLEIINLLSTSKEGISSVEFVINGKNVFY 175

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E G+HR+ RI   ++  R HTS   I V P  ++  +IEI+ +D R+DT+ ASG G
Sbjct: 176 YLKYESGIHRVQRIPKTENKGRIHTSTVKILVIP-NNNHQKIEINWNDIRVDTFNASGPG 234

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           GQ VNTT SAVR+TH+PTG+   CQ  +SQH NK 
Sbjct: 235 GQSVNTTKSAVRLTHLPTGISSSCQIAKSQHDNKE 269


>gi|253795640|ref|YP_003038736.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739948|gb|ACT34283.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 240

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 90/233 (38%), Positives = 128/233 (54%), Gaps = 3/233 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LE+ AG GG E+  +A+ LLRMY R+A K +++    E+  G + GIK A   + G   
Sbjct: 1   MLELRAGVGGREAGLFASQLLRMYERFAAKMRWRVTLTEVSFGCDGGIKRAVADVVGEGV 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             WL  E GVHR+ R+   ++  R HTS  ++ + P    S E+ +  SD +I+T RASG
Sbjct: 61  GLWLAHEAGVHRVQRVPKTETRGRVHTSTVTLALLPSAGASCELGLLNSDLKIETMRASG 120

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVNTTDSAVRITH+PTG V  C   RSQH+N+A A  +LR ++    L      A 
Sbjct: 121 AGGQHVNTTDSAVRITHLPTG-VTACASCRSQHQNRAMALKLLRERVAARALSNAAADAA 179

Query: 298 IGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +++   G    + R+Y       V D +        + VLDG+L   ++A
Sbjct: 180 GVRAAQVADGARAHRARTYSF-VMDKVTDHKLGRSVVGVARVLDGELQLLVRA 231


>gi|219129897|ref|XP_002185114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403293|gb|EEC43246.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 283

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 26/275 (9%)

Query: 81  DCSILQETSDNLQRIKLE---VEYKQFESLLSGEAD--SNDAYLEVHAGAGGTESQDWAN 135
           D  + +E  + LQR+  E   +E    +++L  + D   +DA +E+ AG GG E+  +A+
Sbjct: 9   DKDMQRECENELQRVDRERAVLEGLIVDAVLPEDEDDYESDAIIEIRAGTGGDEASLFAS 68

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-------------------N 176
            LL  Y + A   ++K E L     +  GI+ A++ I G                     
Sbjct: 69  ELLEAYQKAAMAIRWKVEVLAESRTDIGGIREASISISGNASFRLPATDSEREDSGPLLG 128

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG  K E GVHR+ R+   DS         ++  +     + +  +  S+ RI+T R+S
Sbjct: 129 PYGAFKFESGVHRVQRVPINDSRIHTSACSIAVLPFVSSISNEKELLPMSELRIETMRSS 188

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVNTTDSAVRITH+PTG+    Q ERSQHKNKA+A  ++ A++ + +    +   
Sbjct: 189 GAGGQHVNTTDSAVRITHLPTGITAAIQDERSQHKNKAKALKLITARVRDRQRTDAQLAR 248

Query: 297 NIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNI 330
               S+    G    +IR+Y   P   + D R  +
Sbjct: 249 GELRSNLMGGGDRSERIRTYNY-PQDRITDHRCKV 282


>gi|116248645|gb|ABJ90461.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis]
          Length = 158

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 77/158 (48%), Positives = 108/158 (68%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R+   +S 
Sbjct: 1   MYSRYAEDKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQRVPETESQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R+THIPTGV
Sbjct: 61  GRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGV 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           VV+CQ +RSQHKN+A+A ++L A+L + E +KR     
Sbjct: 121 VVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEA 158


>gi|149003372|ref|ZP_01828261.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758555|gb|EDK65553.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 145

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 71/143 (49%), Positives = 98/143 (68%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 1   MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 60

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 61  NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 120

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
                 V+DGDLD F+ A L  +
Sbjct: 121 VAQVDKVMDGDLDGFIDAYLKWR 143


>gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 439

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 43/320 (13%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           A+ +    + LD  ++   ++Q +              +D  IL    +++  +  ++  
Sbjct: 105 AEKVCVVLRQLDENVTLHDQLQSKS---------VRSREDEEILDMLKEDIATLTEQLRL 155

Query: 102 KQFESLLSGEADSNDAYLEVHAG-------------------AGGTESQDWANMLLRMYT 142
            + E          +A +E   G                   AGG E+  +A  L  MY 
Sbjct: 156 LEGEV---------NAVMERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYR 206

Query: 143 RWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            +A E R +K   +   DG EA   S    + G   Y  +  E GVH++ R+   D+  +
Sbjct: 207 TYATEFRNWKVRPVVKDDGSEA-ASSNEFQVSGEGVYRNMHHEIGVHKVQRVPVTDAAGK 265

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
             TS + ++    V D + +++ ESDC+ID  R SG GGQ + ++ + V +TH P+G+ V
Sbjct: 266 MQTSTA-VFTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISV 324

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPY 320
           +C Q RS   NK  A  M+  ++    ++++    +    ++   G    ++R+Y   P 
Sbjct: 325 KCHQSRSALGNKELALQMVAQQILAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQ 383

Query: 321 QMVKDLRTNIEKTSPSDVLD 340
             V D R   +  + S  ++
Sbjct: 384 NRVTDHRIGKD-YALSSFME 402


>gi|153845428|ref|ZP_01993769.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|149745113|gb|EDM56364.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
          Length = 148

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 87/142 (61%), Positives = 108/142 (76%), Gaps = 1/142 (0%)

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +YP +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQH
Sbjct: 5   IYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQH 64

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           KNK QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +
Sbjct: 65  KNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGV 123

Query: 331 EKTSPSDVLDGDLDDFMKATLA 352
           E  +   VLDGDLD F++A+L 
Sbjct: 124 ENRNTQAVLDGDLDKFIEASLK 145


>gi|238506130|ref|XP_002384267.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
 gi|220690381|gb|EED46731.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
          Length = 267

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 24/238 (10%)

Query: 140 MYTRWAEKRKFKTEALEIHDGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R F++  +++  G+   E  +  A + ++   AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCSRRGFRSNVIKLEVGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYPVVDDS--------------IEIEISESDCRIDTYRASGAGGQH 242
           ++  R HTS  S+ V P   ++               +  +   + R +  RA GAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANI 298
           VN T+SA+R+TH+PTG+VV  Q  RSQH N+ +AW +LRA+L E   + RE+        
Sbjct: 121 VNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAIK 354
                  +G G +IR+Y         D R++I   + +DVLDG   L+  M++   ++
Sbjct: 181 VLGGVARMGRGDKIRTYNYG-QSRCTDHRSSITIHNLNDVLDGGEGLETVMESFTTVQ 237


>gi|322499707|emb|CBZ34781.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 439

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 136/320 (42%), Gaps = 43/320 (13%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           A+ +    + LD  ++   ++Q +              +D  I     +++  +  ++  
Sbjct: 105 AEKVCAVLRQLDENVTLHDQLQSKS---------VRSREDEEIFDMAKEDIATLTDQLRV 155

Query: 102 KQFESLLSGEADSNDAYLEVHAG-------------------AGGTESQDWANMLLRMYT 142
            + E          +A +E   G                   AGG E+  +A  L  MY 
Sbjct: 156 LEGEV---------NAVMERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYR 206

Query: 143 RWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            +A E R +K   +   DG EA   S    + G   Y  ++ E GVH++ R+   D+  +
Sbjct: 207 MYATEFRNWKVRPVVKDDGSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGK 265

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
             TS + ++    V D + +++ ESDC+ID  R SG GGQ + ++ + V +TH P+G+ V
Sbjct: 266 MQTSTA-VFTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISV 324

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPY 320
           +C Q RS   NK  A   +  ++    ++++    +    ++   G    ++R+Y   P 
Sbjct: 325 KCHQSRSALGNKELALQTVAQQILVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQ 383

Query: 321 QMVKDLRTNIEKTSPSDVLD 340
             V D R   +  + S  ++
Sbjct: 384 NRVTDHRIGKD-YALSSFME 402


>gi|169607138|ref|XP_001796989.1| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
 gi|160707160|gb|EAT86455.2| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
          Length = 294

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 42/283 (14%)

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +    +D+L   + ++       + S             LE+  GAGG+E+  +A  
Sbjct: 19  DPELRSLAADDLGESRTQLANASQSLITSLVPVHPFAHLPCILEIRPGAGGSEAAIFAGD 78

Query: 137 LLRMYTRWAEKRKFKTEA---LEIHDGEEAGIK--SATLLIKGPNAYGWLKGEQGVHRLV 191
           L RMY  +  +  F+T       ++   EAG+    A   I+  +AYG  + ++      
Sbjct: 79  LFRMYQTFCNRSGFRTSLLKYENVNGTTEAGVPLSEAIFEIENADAYGVFRSQEDFENP- 137

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
                                       +  I + + +++  RASGAGGQHVN T+SAVR
Sbjct: 138 --------------------------ESDYYIDQKEIKLEVMRASGAGGQHVNKTESAVR 171

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA---NIGESSKTEIGW 308
           +THIPT  VV  Q  RSQHKNK  AW+++R+++ +L  +KREE             ++G 
Sbjct: 172 LTHIPTNTVVSMQDSRSQHKNKESAWSLMRSRIAQLRREKREEEMVNLRRSVVGVAKMGR 231

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
           G ++R+Y     Q V D R+ I      DV+ G   L+  M++
Sbjct: 232 GDKVRTYNWG-QQRVTDHRSGITVHDLDDVMGGGQTLEKVMES 273


>gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
 gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
          Length = 439

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 136/320 (42%), Gaps = 43/320 (13%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           A+ +    + LD  ++   ++Q +              +D  I     +++  +  ++  
Sbjct: 105 AEKVCAVLRQLDENVTLHDQLQSKS---------VRSREDEEIFDMAKEDIATLTDQLRV 155

Query: 102 KQFESLLSGEADSNDAYLEVHAG-------------------AGGTESQDWANMLLRMYT 142
            + E          +A +E   G                   AGG E+  +A  L  MY 
Sbjct: 156 LEGEV---------NAVMERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYR 206

Query: 143 RWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            +A E R +K   +   DG EA   S    + G   Y  ++ E GVH++ R+   D+  +
Sbjct: 207 MYATEFRNWKVRPVVKDDGSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGK 265

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
             TS + ++    V D + +++ ESDC+ID  R SG GGQ + ++ + V +TH P+G+ V
Sbjct: 266 MQTSTA-VFTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISV 324

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPY 320
           +C Q RS   NK  A   +  ++    ++++    +    ++   G    ++R+Y   P 
Sbjct: 325 KCHQSRSALGNKELALQTVAQQILVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQ 383

Query: 321 QMVKDLRTNIEKTSPSDVLD 340
             V D R   +  + S  ++
Sbjct: 384 NRVTDHRIGKD-YALSSFME 402


>gi|60279679|ref|NP_001012512.1| peptide chain release factor 1, mitochondrial [Danio rerio]
 gi|58701973|gb|AAH90173.1| Zgc:113104 [Danio rerio]
          Length = 235

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 12/219 (5%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           +  MY  +A  + +  E       E  G+  A++ + G   + WLK E G HR+ RI   
Sbjct: 1   MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60

Query: 197 DSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
             +SR    HT   ++ V P + + ++I+I+  D RIDT+R+ GAGGQHVNTTDSAVR+ 
Sbjct: 61  GLSSRMQRIHTGTMTVIVLPQM-EEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLV 119

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GR 310
           H+PTG V +CQQ RSQ KN+  A  +LRA+L++  + ++ E      + + ++G      
Sbjct: 120 HLPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQRE--QTHTARRLQVGTRAQSE 177

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFM 347
           +IR+Y       V D R         + + G   L+D +
Sbjct: 178 RIRTYNF-TQDRVTDHRIGFVTRDIKEFMRGAEGLEDLL 215


>gi|121704606|ref|XP_001270566.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
 gi|119398712|gb|EAW09140.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
          Length = 251

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 115/237 (48%), Gaps = 24/237 (10%)

Query: 140 MYTRWAEKRKFKTEAL--EIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R F +  +  ++ DG  E  +  A + I    AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCSRRGFPSHVIKLDVQDGPSEDRLSEAVIEIDAGGAYDLLRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYPVVDDS--------------IEIEISESDCRIDTYRASGAGGQH 242
           ++  R HTS  S+ V P   D+               +  I   + R +  RASGAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPDTATGAEGALNFDDPNSDYYIDPQEVRTEKMRASGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANI 298
           VN T+SA+R+THIPTG VV  Q  RSQH N+ +AW +LRAKL E   + RE+        
Sbjct: 121 VNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRAKLAEARQESREQELVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  +G G +IR+Y         D R+ I   +  D+L G   LD  M +    
Sbjct: 181 VLGGVARMGRGDKIRTYNYG-QSRCTDHRSGITVHNLDDILGGGQGLDTVMDSVRTW 236


>gi|207109382|ref|ZP_03243544.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 196

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 77/203 (37%), Positives = 110/203 (54%), Gaps = 10/203 (4%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  IKE ++ L D   L ELA EE    IL+    +L+    ++       +     D 
Sbjct: 3   VLENIKENKELLED-KELSELAKEE--LKILEIQKSDLETAIKQL------LIPKDPNDD 53

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG
Sbjct: 54  KNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKG 113

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
              Y  LK E G HR+ R+   +S  R HTS  ++ + P V D +E+ I+ SD +I+ +R
Sbjct: 114 KGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEV-DDVEVSINPSDLKIEVFR 172

Query: 235 ASGAGGQHVNTTDSAVRITHIPT 257
           A G GGQ VNTTDSAVRITH+PT
Sbjct: 173 AGGHGGQCVNTTDSAVRITHLPT 195


>gi|62719461|gb|AAX93331.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis]
          Length = 156

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 84/156 (53%), Positives = 108/156 (69%), Gaps = 1/156 (0%)

Query: 178 YGWLKGEQG-VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           YG+LK  +G    LVR+SP+DS  RRHTS +S+ V P +D++   +I+  D RID +R+S
Sbjct: 1   YGYLKIRKGEFIGLVRLSPFDSAGRRHTSLASVNVMPELDENANGDINPDDLRIDVFRSS 60

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A NML++KLYELE +K+ E  
Sbjct: 61  GAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEK 120

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
              E  + EIGWG QIRSYV  PY MVKD  T  E 
Sbjct: 121 AKIEGKQLEIGWGSQIRSYVFHPYTMVKDHGTGHET 156


>gi|149003371|ref|ZP_01828260.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758554|gb|EDK65552.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 165

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 2/166 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           +  K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E  D S+ 
Sbjct: 1   MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+ 
Sbjct: 59  DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
             + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLV
Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLV 164


>gi|82540115|ref|XP_724399.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479026|gb|EAA15964.1| Peptidyl-tRNA hydrolase domain, putative [Plasmodium yoelii yoelii]
          Length = 330

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 89/272 (32%), Positives = 142/272 (52%), Gaps = 34/272 (12%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIK 166
           +   N   L + +G GGTE+ D+ NML  MY ++      K+  K E ++I   E  GIK
Sbjct: 57  KYFKNSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKNIKYEVIDISKNEI-GIK 115

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV------------ 214
              + + G  ++  L  E+G+HRLVR SP++S +++ TSF  + V P             
Sbjct: 116 KVEIKVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNFL 175

Query: 215 -VDDSIEIE--------------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            ++++  I               +++SD  I T R+ G GGQ+VN  ++AVRI H PT +
Sbjct: 176 NINENDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTNI 235

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
            V+   ERSQ  NK  A  M+  KL  L++ +  +      S+K+   +G QIR+Y+L  
Sbjct: 236 SVKVSSERSQILNKRIALKMIYEKLLYLQI-EALKNVKYELSNKSLTHFGEQIRNYILYG 294

Query: 320 YQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350
            +M+KD RTN+  T    +L  G++D F++A 
Sbjct: 295 NKMIKDTRTNVFSTEIDKILSQGEIDIFVEAY 326


>gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major]
 gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain
           Friedlin]
          Length = 439

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 43/320 (13%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           A  +    + LD   +   ++Q +              +D  IL    +++  +  ++  
Sbjct: 105 AAKVCAVLRQLDENATLHDQLQSKS---------LRNREDEEILDMVKEDIATLMNQLRL 155

Query: 102 KQFESLLSGEADSNDAYLEVHAG-------------------AGGTESQDWANMLLRMYT 142
            + E          +A +E   G                   AGG E+  +A  L  MY 
Sbjct: 156 LEGEV---------NAVMERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYR 206

Query: 143 RWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            +A E R +K   +   DG EA   S    + G   Y  ++ E GVH++ R+   D+  +
Sbjct: 207 MYATEFRNWKVRPVVKDDGSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGK 265

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
             TS + ++    V D + +++ E+DC+ID  R SG GGQ + ++ + V +TH P+G+ V
Sbjct: 266 MQTSTA-VFTMMPVLDPVSVDVHENDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISV 324

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPY 320
           +C Q RS   NK  A  M+  ++    ++++    +    ++   G    ++R+Y   P 
Sbjct: 325 KCHQSRSALGNKELALQMVAQQILAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYN-HPQ 383

Query: 321 QMVKDLRTNIEKTSPSDVLD 340
             V D R   +  + S  ++
Sbjct: 384 NRVTDHRLGKD-YALSSFME 402


>gi|71000757|ref|XP_755060.1| mitochondrial translation release factor (RF-1) [Aspergillus
           fumigatus Af293]
 gi|66852697|gb|EAL93022.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus Af293]
 gi|159128074|gb|EDP53189.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus A1163]
          Length = 256

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 24/237 (10%)

Query: 140 MYTRWAEKRKFKTEAL--EIHDGEEAGI-KSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R  ++  +  ++ DG        A + I    AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCSRRGLQSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYPVVDD--------------SIEIEISESDCRIDTYRASGAGGQH 242
           ++  R HTS  S+ V P   +              + +  +   + R +  RASGAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPEAGPSMDSALNFDDPNSDYYVDPQEVRTEKMRASGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANI 298
           VN T+SA+R+THIPTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE+        
Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353
                  +G G +IR+Y         D R+ I   +  +VLDG   L+  M +    
Sbjct: 181 VLGGVARMGRGDKIRTYNYG-QSRCTDHRSGITVHNLDNVLDGGESLETIMDSVRTW 236


>gi|221133260|ref|XP_002171178.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 205

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 71  ILLELALEEDD-CSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGA 125
            ++ELA    D   + +   + +   ++ +   +   L       + DSN+A +E+ AG 
Sbjct: 1   EIIELAALGIDNKEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGT 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  +L MY +++   ++K E L+  +  + G+K  ++ I G   +G LK E 
Sbjct: 61  GGREAAIFAAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEI 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS  ++ V P   +SI++ ++  D ++DT+R+SGAGGQHVNT
Sbjct: 121 GVHRVQRVPITESLGRVHTSTVTVAVLPQP-ESIDVVLNMKDVKVDTFRSSGAGGQHVNT 179

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHK 271
           TDSAVR+THIP+G+VV  Q +RSQ +
Sbjct: 180 TDSAVRLTHIPSGLVVAVQSQRSQIE 205


>gi|237830659|ref|XP_002364627.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211962291|gb|EEA97486.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221507504|gb|EEE33108.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 545

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 138/258 (53%), Gaps = 7/258 (2%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSN----DAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           +   ++   + E +    +   E D      DA LE+ AG GG ++  ++  LL MY  +
Sbjct: 247 AREKEKKNAQEEKRDKSMIFDPENDEQALQGDAVLEIQAGVGGEDAALFSRDLLGMYEAF 306

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           +  R +    L+I + E+ G + A+  ++GP+A+  L  E G+HR+ R+ P ++  R  T
Sbjct: 307 SLARGWVFRVLDIQETEKGGYRRASAQVEGPDAFRLLSLEAGIHRVQRVPPTEARGRMQT 366

Query: 205 SFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           S +++ V P   +  + I++S    +ID  RASG GGQ VN +++AVRITH PTGV V C
Sbjct: 367 SATAVTVLPRSGNLEDKIDLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHC 426

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
            + +SQ +NK+ A  +LRA+L +  +++  EE     ++ K       +IR+Y  Q   +
Sbjct: 427 MRTQSQMENKSLALELLRAQLLQQLMRQASEERGRALDAQKGSKDRSEKIRTYNFQ-RDV 485

Query: 323 VKDLRTNIEKTSPSDVLD 340
           V D R  +      + LD
Sbjct: 486 VTDHRCRMHVNGVEEFLD 503


>gi|326478702|gb|EGE02712.1| peptide chain release factor 1 [Trichophyton equinum CBS 127.97]
          Length = 360

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 28/298 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQR----IKL 97
           +   +    +    + +K+          L  L  E   D  +     D++      +  
Sbjct: 44  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 103

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
             +  +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 104 LSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAKMLRMYTSFCSSRGLRTTIIKM 163

Query: 158 HDGEEAGI------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G           + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 164 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 223

Query: 212 YPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P   ++              +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 224 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 283

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQI 312
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +I
Sbjct: 284 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKI 341


>gi|119493428|ref|XP_001263904.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
 gi|119412064|gb|EAW22007.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
          Length = 256

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 114/237 (48%), Gaps = 24/237 (10%)

Query: 140 MYTRWAEKRKFKTEAL--EIHDGEEAGI-KSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           MYT +  +R  ++  +  ++ DG        A + I    AY  L+ E GVHR+ R+   
Sbjct: 1   MYTAFCTRRGLRSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60

Query: 197 DSNSRRHTSFSSIWVYPVVDD--------------SIEIEISESDCRIDTYRASGAGGQH 242
           ++  R HTS  S+ V P   +                +  +   + R +  RASGAGGQH
Sbjct: 61  ETKGRTHTSAVSVMVLPSFPEAGASMDSALNFDDPDSDYYVDPQEVRTEKMRASGAGGQH 120

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANI 298
           VN T+SA+R+THIPTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE+        
Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353
                  +G G +IR+Y         D R+ I   +  +VLDG   L+  M +    
Sbjct: 181 VLGGVARMGRGDKIRTYNYG-QSRCTDHRSGITVHNLDNVLDGGESLETIMDSVRTW 236


>gi|56755637|gb|AAW25997.1| SJCHGC05491 protein [Schistosoma japonicum]
          Length = 431

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 38/336 (11%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALE------EDDCSILQETSDNLQRIKLEVEYKQ 103
           + L   +  I+E+   L  +  + +L  +      EDD + L+  ++   + +  +    
Sbjct: 77  KKLRPLVDVIEELDILLEADKEVEQLVADIVGTDAEDDVNDLKALAELEHKQRNILREAL 136

Query: 104 FESLLSG--EADSND----AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
            + LL+     D  D      +E+ AGAGG E+  +A+ LL MY   A +R +     + 
Sbjct: 137 EKKLLNLLLPVDQRDLESTVIMELFAGAGGKEAGLFAHDLLIMYQALAIQRNWSFNIKQE 196

Query: 158 H--DGEEAGIKS-------ATLLIKGP----------NAYGWLKGEQGVHRLVRISPYDS 198
                EE              + I+G            AYG LK E GVHR+ R+    S
Sbjct: 197 TVMSSEECTPSHNEKSLSYVRVEIQGEPTAESGILSLGAYGQLKWEAGVHRVQRVPVTSS 256

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            ++ HTS  ++ + P   D      S+ D + + +R +G GGQ++N + SAVR+TH+PTG
Sbjct: 257 QNKIHTSTVAVSIQPNYGDVDVDI-SDDDLKWEFHRPTGPGGQNLNKSTSAVRLTHLPTG 315

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYVL 317
           ++V CQ+ER QH NK  A  ML+ KL +++L+ +   I +I +S    +    +IR+Y  
Sbjct: 316 IIVSCQRERHQHTNKKHALGMLKEKLRDIQLKSQLHLIDSIRQSHLGNLDRSEKIRTYNF 375

Query: 318 QPYQMVKDLRTNIEKTSPSDVLD---GDLDDFMKAT 350
            P   + D R      +    +    G L + +++ 
Sbjct: 376 -PQDRITDHRLGNSWNNLHRFMKQAVG-LSELIESL 409


>gi|213421201|ref|ZP_03354267.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 148

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 87/144 (60%), Positives = 108/144 (75%), Gaps = 1/144 (0%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQ
Sbjct: 4   FVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQ 63

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT 
Sbjct: 64  HKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDS-RIKDLRTG 122

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDG LD F++A+L  
Sbjct: 123 VETRNTQAVLDGSLDQFIEASLKA 146


>gi|68072219|ref|XP_678023.1| peptide chain release factor [Plasmodium berghei strain ANKA]
 gi|56498354|emb|CAH99275.1| peptide chain release factor, putative [Plasmodium berghei]
          Length = 329

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 35/272 (12%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIK 166
           +   N   L + +G GGTE+ D+ NML  MY ++      K+  K E ++I   E  GIK
Sbjct: 57  KYFKNSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKYIKYEVIDISKNEI-GIK 115

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV------------ 214
              + + G  ++  L  E+G+HRLVR SP++S +++ TSF  + V P             
Sbjct: 116 KVEIKVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNFL 175

Query: 215 -VDDSIEIE--------------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            ++++  I               +++SD  I T R+ G GGQ+VN  ++AVRI H PT +
Sbjct: 176 NINENDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTNI 235

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
            V+   ERSQ  NK  A  M+   LY     +  +      S+K+   +G QIR+Y+L  
Sbjct: 236 SVKVSSERSQILNKRIALKMIEKLLYL--QIEALKNVKYELSNKSLTHFGEQIRNYILYG 293

Query: 320 YQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350
            +M+KD RTN+  T    +L  G++D F++A 
Sbjct: 294 NKMIKDTRTNVFSTEIDKILSQGEIDIFVEAY 325


>gi|308454222|ref|XP_003089760.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
 gi|308269005|gb|EFP12958.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
          Length = 390

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 91/303 (30%), Positives = 147/303 (48%), Gaps = 17/303 (5%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQE-TSDNLQRIKLEV 99
            + + ++   + +  S + ++   + D     E+  L E D   ++E     LQ +   V
Sbjct: 68  WEAIAKQASIVSDTRSELSQLNSIINDLKETEEMRKLAEGDVESIKETLESELQELATRV 127

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  +LS         +E+ +GAGG E+  +   LL MY + A    +K + L++ +
Sbjct: 128 VPLNNLDVLSK------CQIELSSGAGGQEAMLFTGELLDMYQKLAASNSWKWDPLQVDN 181

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
               G++SA + + G N Y  ++ E GVHR+ R+   DS  R HTS SSI V P  ++  
Sbjct: 182 VPLGGVRSALIAVSGENVYAKMRFEAGVHRVQRVPVNDS--RMHTSTSSISVLPEPEEVS 239

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +  S+S  +I+  RASG GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  
Sbjct: 240 VVVPSDSV-KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKR 298

Query: 280 LRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L A L + ++    E   I    K ++G      +IR+Y  Q +  V D R  +  T  +
Sbjct: 299 LAAILMQRQVDAMLE--KIVSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIQMAITGVN 355

Query: 337 DVL 339
           + L
Sbjct: 356 EFL 358


>gi|268552039|ref|XP_002634002.1| Hypothetical protein CBG20109 [Caenorhabditis briggsae]
 gi|187023852|emb|CAP37210.1| hypothetical protein CBG_20109 [Caenorhabditis briggsae AF16]
          Length = 389

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 87/303 (28%), Positives = 143/303 (47%), Gaps = 17/303 (5%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEEDDCSILQETSDNLQRIKLEV 99
            + + ++   + +    + ++   + D     E+    E D  S+ +     L+ +   V
Sbjct: 67  WEAIAKQSSVVSDTRFELAQLNSIIKDPNETEEMRKLAEADVESLKETLETGLKELAARV 126

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  +LS         +E+ +GAGG E+  +   LL MY + A    +K + L++  
Sbjct: 127 VPLTNLDVLSK------CQIELSSGAGGQEAMLFTGELLDMYQKLAATNSWKWDPLQVDS 180

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
               G++SA + + G N Y  ++ E GVHR+ R+   DS  R HTS +SI V P  ++  
Sbjct: 181 VPLGGVRSALIAVSGENVYSKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVS 238

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +  S+S  +I+  RASG GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  
Sbjct: 239 VVVPSDSV-KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKR 297

Query: 280 LRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L A L + ++    E   I    K ++G      +IR+Y  Q +  V D R  +  T   
Sbjct: 298 LAAILMQRQVDAMLE--KIVSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIGMAITGVE 354

Query: 337 DVL 339
           + L
Sbjct: 355 EFL 357


>gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei TREU927]
 gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei]
 gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 459

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 31/313 (9%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ------ 103
            HL      IK ++D+L  +  L      +DD  IL    ++++ +  +V          
Sbjct: 121 AHLLKINDNIK-LKDQLHSHETL-----SDDDRDILLMVEEDVRELVEKVRDMDSDVNAV 174

Query: 104 FESLLSGEADSNDAY-----LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALE- 156
               L+   D+  +      LEV   AGG E+  +A+ LL MY  +A E R +  +    
Sbjct: 175 MTRRLNLS-DALGSCTNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGG 233

Query: 157 -------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
                     G   G     + +KG   Y  L+ E GVH++ R+   D + +  TS + +
Sbjct: 234 EGDGEPVSSGGPAVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVV 293

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + PV+ D + +++ E DC I+  R SG GGQ + ++ +AV +TH P+G+ V+C Q RS 
Sbjct: 294 TLMPVL-DPVSVDVHEKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSA 352

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRT 328
             NK  A  M+  +L    ++ +    +    ++   G    ++R+Y   P   V D R 
Sbjct: 353 LGNKELALQMVAQQLLVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNY-PQNRVTDHRL 411

Query: 329 NIEKTSPSDVLDG 341
             +  S    LDG
Sbjct: 412 GRD-YSLGTFLDG 423


>gi|255023944|ref|ZP_05295930.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 184

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 3/171 (1%)

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K   G HR+ R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ
Sbjct: 1   KYXNGAHRVQRVPETESGGRIHTSTATVAILPEA-EEVEIELHDKDIRTDTFASTGAGGQ 59

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGE 300
            VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+  E + REE     +
Sbjct: 60  SVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRK 119

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           S+        +IR+Y   P   V D R  +       +++G LD+ + A +
Sbjct: 120 SAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 169


>gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 459

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 31/313 (9%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ------ 103
            HL      IK ++D+L  +  L      +DD  IL    ++++ +  +V          
Sbjct: 121 AHLLKINDNIK-LKDQLHSHETL-----SDDDRDILLMVEEDVRELVEKVRDMDSDVNAV 174

Query: 104 FESLLSGEADSNDAY-----LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALE- 156
               L+   D+  +      LEV   AGG E+  +A+ LL MY  +A E R +  +    
Sbjct: 175 MTRRLNLS-DALGSCTNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGG 233

Query: 157 -------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
                     G   G     + +KG   Y  L+ E GVH++ R+   D + +  TS + +
Sbjct: 234 EGDGEPVSSGGPAVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVV 293

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + PV+ D + +++ E DC I+  R SG GGQ + ++ +AV +TH P+G+ V+C Q RS 
Sbjct: 294 TLMPVL-DPVSVDVHERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSA 352

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRT 328
             NK  A  M+  +L    ++ +    +    ++   G    ++R+Y   P   V D R 
Sbjct: 353 LGNKELALQMVAQQLLVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNY-PQNRVTDHRL 411

Query: 329 NIEKTSPSDVLDG 341
             +  S    LDG
Sbjct: 412 GRD-YSLGTFLDG 423


>gi|308478247|ref|XP_003101335.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
 gi|308263236|gb|EFP07189.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
          Length = 390

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 89/303 (29%), Positives = 143/303 (47%), Gaps = 17/303 (5%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQE-TSDNLQRIKLEV 99
            + + ++   + +  S + ++   + D     E+  L E D   ++E     LQ +   V
Sbjct: 68  WEAIAKQAAIVSDTRSELFQLNSIINDLKETEEMRKLAEGDVESIKETLESELQVLATRV 127

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  +LS         +E+ +GAGG E+  +   LL MY + A    +K + L++ +
Sbjct: 128 VPLNNLDVLSK------CQIELSSGAGGQEAMLFTGELLDMYQKLAASNSWKWDPLQVDN 181

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
               G++SA + + G N Y  ++ E GVHR+ R+   DS  R HTS SSI V P  ++  
Sbjct: 182 VPLGGVRSALIAVSGENVYAKMRFEAGVHRVQRVPVNDS--RMHTSTSSISVLPEPEEVS 239

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +       +I+  RASG GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  
Sbjct: 240 VVV-PSDSVKIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKR 298

Query: 280 LRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L A L + ++    E   I    K ++G      +IR+Y  Q +  V D R  +  T   
Sbjct: 299 LAAILMQRQVDAMLE--KIVSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIQMAITGVD 355

Query: 337 DVL 339
           + L
Sbjct: 356 EFL 358


>gi|17542784|ref|NP_500737.1| hypothetical protein W03F8.3 [Caenorhabditis elegans]
 gi|6093954|sp|O44568|RF1M_CAEEL RecName: Full=Probable peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|2736385|gb|AAB94190.1| Hypothetical protein W03F8.3 [Caenorhabditis elegans]
          Length = 389

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 90/314 (28%), Positives = 152/314 (48%), Gaps = 19/314 (6%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEEDDCSILQETSDNLQRIKLEV 99
            + + ++   + +  S + +++  + D     E+    E D  SI +     LQ + +++
Sbjct: 67  WESISKQSAKVSDGRSELSQLRTIINDPKETEEMRKLAEVDVESIEENLETELQELAVKI 126

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  +LS         +E+  GAGG E+  +   LL MY + A    +K + L++ +
Sbjct: 127 VPLNNLDVLSK------CQIELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDN 180

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
               G++SA + + G   Y  ++ E GVHR+ R+   DS  R HTS +SI V P  ++  
Sbjct: 181 VPLGGVRSALIAVSGEKVYAKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVS 238

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +  S+S  +I+  RASG GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  
Sbjct: 239 VVVPSDSV-KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKR 297

Query: 280 LRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L A L + ++    E   I    K ++G      +IR+Y  Q +  V D R  +  T  +
Sbjct: 298 LAAILMQKQVDAMLE--KIVSKRKLQVGSKARAEKIRTYNFQ-HDRVTDHRIQMSITGVA 354

Query: 337 DVLD-GD-LDDFMK 348
           + L  G+ L   ++
Sbjct: 355 EFLSAGETLQTMIE 368


>gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 302

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 34/278 (12%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG------------------- 124
           +L  T +++  +  ++       LL GE    +A +E   G                   
Sbjct: 1   MLDMTKEDIATLTDQLR------LLEGEI---NAVMERRIGSDDMIGSATSVWNINVEGK 51

Query: 125 AGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           AGG E+  +A  L  MY  +A E  K++   + + DG EA   S    ++G   Y  +  
Sbjct: 52  AGGEEASLFAAELAEMYRTYAMEFCKWEVCPVAMDDGSEA-CSSNEFQVRGEGVYRNMHH 110

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVH++ R+   D+  +  TS + ++    V D + +++ ESDC+ID  R SG GGQ +
Sbjct: 111 EIGVHKVQRVPVTDATGKMQTSTA-VFTLMPVLDPVSVDVHESDCKIDFVRGSGPGGQGM 169

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
            ++ + V +TH P+G+ V+C Q RS   NK  A  M+  ++    ++++    +    ++
Sbjct: 170 QSSSNCVVLTHKPSGISVKCHQCRSALGNKELALQMVAQQILARRVKEQNSSLHKAWQNQ 229

Query: 304 TEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
              G    ++R+Y   P   V D R   +  + S  ++
Sbjct: 230 WSSGERSDRMRTYNY-PQNRVTDHRIGKD-YALSSFME 265


>gi|255637443|gb|ACU19049.1| unknown [Glycine max]
          Length = 155

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/140 (46%), Positives = 90/140 (64%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            D+S+ +EI E D  I   RA G GGQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK 
Sbjct: 5   PDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKI 64

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           +A + L+AKL  +  ++R            +  WG+QIR+YV  PY++VKD+RT  E T 
Sbjct: 65  RALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETTD 124

Query: 335 PSDVLDGDLDDFMKATLAIK 354
            + V+DG+LD F+K+ L  K
Sbjct: 125 ITSVMDGELDPFIKSYLKHK 144


>gi|149919721|ref|ZP_01908199.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
 gi|149819492|gb|EDM78922.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
          Length = 311

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/297 (22%), Positives = 122/297 (41%), Gaps = 25/297 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            +N  +R   L     D  +  +      L RE   L       + + E++ +L +   L
Sbjct: 9   IENIAERHEELGEMICDQEVMADKRRFLELSREHAELTPVAMAFAKLVELERQLGETREL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGT 128
           L      DD  + +    +++ +  +VE  +     LL      D+ +  LE+ AG GG 
Sbjct: 69  L------DDPDMRELAQADVRELGGQVEDAETELTRLLTPKDPNDAKNVILEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L RMY R++E+ ++  + +E  +    G K  T  ++G  A+  LK E+GVH
Sbjct: 123 EAGLFVADLWRMYNRFSERHRWAIDQVEFSENSAGGFKEITGRVQGKGAWAQLKFERGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ + P    S    I     R  + R      +  +T+  
Sbjct: 183 RVQRVPATESQGRIHTSTATVAIMPEPRTSTSTSIP----RTSSSRPCARAARAGSTSTP 238

Query: 249 AVRITHIP--TGVVVQC------QQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            +R    P   G  V+C      Q   S    +++  + +++K        R E   
Sbjct: 239 RLRGPPAPQAHGHRVRCDQRSPAQNASSHEALRSRCSDQIQSKQRRRPWSDRREAQK 295


>gi|332825293|ref|XP_003311599.1| PREDICTED: mitochondrial translational release factor 1-like [Pan
           troglodytes]
          Length = 281

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 6/209 (2%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ I+ + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           IDT RASGAGGQHVNTTDSAVRI H+PTG
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTG 269


>gi|315254830|gb|EFU34798.1| PCRF domain protein [Escherichia coli MS 85-1]
          Length = 210

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 7/196 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFS 207
           R+   +S  R HTS  
Sbjct: 186 RVPATESQGRIHTSAC 201


>gi|71900150|ref|ZP_00682291.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
 gi|71730099|gb|EAO32189.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
          Length = 175

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 7/159 (4%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+RIT
Sbjct: 2   PATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRIT 61

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310
           H+PTGVVV+ Q ERSQH N+ +A   L+A+L E E    ++      + K ++G G    
Sbjct: 62  HLPTGVVVESQTERSQHANRDKAMKRLKAQLIESERS--QQATAEAMTRKLQVGSGDRSQ 119

Query: 311 QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348
           +IR+Y   P   + D R  N+      ++++GDLD  + 
Sbjct: 120 RIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLID 157


>gi|332213667|ref|XP_003255946.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 271

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 6/208 (2%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|119568099|gb|EAW47714.1| mitochondrial translational release factor 1-like, isoform CRA_c
           [Homo sapiens]
          Length = 271

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 6/208 (2%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|114609871|ref|XP_001140771.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 5 [Pan troglodytes]
          Length = 271

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 6/208 (2%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ I+ + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|166795305|ref|NP_001107656.1| peptide chain release factor 1-like, mitochondrial isoform b [Homo
           sapiens]
 gi|15680165|gb|AAH14428.1| MTRF1L protein [Homo sapiens]
 gi|56203459|emb|CAI18898.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|193787809|dbj|BAG53012.1| unnamed protein product [Homo sapiens]
          Length = 271

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 6/208 (2%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 182 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPT 268


>gi|317491073|ref|ZP_07949509.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920620|gb|EFV41943.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 205

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 6/209 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E      + L+   + A     K    E      AG  +S  L + G 
Sbjct: 2   ILLQISSAQGPDECALAVALALKQLQKEAAALGVKVTVAEQEPARRAGTLRSVLLSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+   + R   F  +  Y   D  IE EI     + ++ ++
Sbjct: 62  AAEHISNTWCGTLQWTCESPWRGGNGRKNWFIGVARYCFEDVVIEGEI-----KFESLKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SA+R TH+ +G+VV+ Q ERSQH NK  A  ++  KL + +   + EI
Sbjct: 117 SGPGGQHVNKTESAIRATHLASGIVVKVQTERSQHANKRLAKLLIAHKLEQQQQNMQSEI 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                    +I  G  +R +    +  VK
Sbjct: 177 KAQRRMFHHQITRGNPVRMFKGPDFTPVK 205


>gi|323964710|gb|EGB60181.1| peptide chain release [Escherichia coli M863]
          Length = 160

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/146 (42%), Positives = 94/146 (64%), Gaps = 2/146 (1%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ E
Sbjct: 1   MTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDE 60

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKD 325
           RSQHKNKA+A ++L A+++  E+ KR++       +    G    + R+Y   P   V D
Sbjct: 61  RSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTD 119

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            R N+      +V++G LD  ++  +
Sbjct: 120 HRINLTLYRLDEVMEGKLDMLIEPII 145


>gi|116334943|ref|YP_802438.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
 gi|116235224|dbj|BAF35072.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
          Length = 229

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 8/230 (3%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N   +E+  G GG ES ++A  + +MY ++ EK+    E +   +      K   L ++
Sbjct: 2   KNYLIIEIRQGIGGEESINFAKDIYKMYVKFFEKQNINFEIISNSN-----FKEIILKVE 56

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
                  L  E G+HR+ RI   ++  R HTS  +++V  +  D+  +++   D +I+  
Sbjct: 57  NNVFDKKLLNESGIHRVQRIPKSETQGRVHTSTCTVFVANINLDN-NLKLKNEDLKIEIC 115

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           ++SG+GGQHVN T+SA++I H+PT + V+C  ERSQ+ NK +A  +L  K+ + +     
Sbjct: 116 KSSGSGGQHVNKTNSAIKIIHLPTKIAVECSDERSQNLNKTKALIILNMKILKFQKNNYN 175

Query: 294 -EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            ++ N+ +   +     ++IR+Y       + D   N      + +L+G+
Sbjct: 176 TQLNNVRKKLISNSERAKKIRTYNF-TNNKITDHINNKNYFQLNKILNGE 224


>gi|124808906|ref|XP_001348439.1| peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
 gi|23497333|gb|AAN36878.1|AE014820_28 peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
          Length = 304

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 10/245 (4%)

Query: 112 ADSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE-ALEIHDGEEAGIKSAT 169
            D+ +   +E   G GG E+  W+  LL  Y  +AE+ K K E   +I D      K   
Sbjct: 60  NDNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENL 119

Query: 170 LLIKGP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            +IK       N Y   K E G+H++ RI   DS +R H+S +++ ++    +  + EI+
Sbjct: 120 RIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEIN 179

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +I T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER+Q  NK  A   L  K+
Sbjct: 180 LKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKI 239

Query: 285 YELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
             +E +++E +     +    E     +IR+Y       + D   N +K        G L
Sbjct: 240 QHMESKEKENMVQHERAKLIKESNRSNRIRTYNFF-RGYITDH-INKKKIDLIYFEKGKL 297

Query: 344 DDFMK 348
           +  + 
Sbjct: 298 EYILN 302


>gi|323964709|gb|EGB60180.1| peptide chain release [Escherichia coli M863]
          Length = 200

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 7/195 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   D L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSF 206
           R+   +S  R HTS 
Sbjct: 186 RVPATESQGRIHTSA 200


>gi|241205972|ref|YP_002977068.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859862|gb|ACS57529.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 204

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 94/199 (47%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L + AG G  E +     LL +  R A +     E       ++ G KSA + + G  A 
Sbjct: 6   LLITAGNGPVECRMALAALLGILEREAVRLGCSFETNLGPMPDQHGAKSAIVSLNGFEAE 65

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
                  G  R    S      +R   + S+       +  E+ I  +D R +T RA G 
Sbjct: 66  QIANDYCGTIRFTFKSQVRPGHKRQNWYVSVQRIDTKPEGGEVTIDPADLRFETLRAGGP 125

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH NTTDSAVR+ H PTG+V   + ERSQH+NKA A   L A L  LE++K+E   + 
Sbjct: 126 GGQHQNTTDSAVRVLHRPTGLVATARDERSQHRNKALALRRLEAMLRHLEVEKQEAAKSG 185

Query: 299 GESSKTEIGWGRQIRSYVL 317
              +   I  G +++S+ L
Sbjct: 186 RFIANRTIERGNEVKSFKL 204


>gi|332878808|ref|ZP_08446523.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683159|gb|EGJ56041.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 235

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 4/205 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
            +++ AG G  E Q     +L+++ + A ++      +   +G+    IKS T+ +KG  
Sbjct: 5   IIQITAGRGPLECQWVVAKVLKVFLQEATQKGIDYTIVSREEGDANLTIKSVTVQLKGKE 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              +LK   G    V  S +    +R   +  ++    +        SE D +  T R+ 
Sbjct: 65  LSAFLKSWLGTVCWVGKSTFRKFHQRSNWYIGVFELDQLQRQ---SFSERDVQFQTTRSQ 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  +SAVR TH+PTGV V  Q  RSQ  NK  A N LR KL E+ELQ+  E A
Sbjct: 122 GNGGQNVNKVNSAVRATHLPTGVSVFAQDSRSQLDNKKLALNRLREKLAEIELQQLAEQA 181

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               ++ T++  G  +R++    ++
Sbjct: 182 QNHWNNHTQVQRGNPVRTFNGSDFK 206


>gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 456

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 85/334 (25%), Positives = 149/334 (44%), Gaps = 32/334 (9%)

Query: 35  LWQ-----NVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDCSILQ 86
           LW       +  A+ +      L+  +    +I   +D + ++  LL + LEED  S+L 
Sbjct: 92  LWNIQYREEIDVAEEISGYLVKLNENVKLRDQILLEKDSVGEDRDLLSI-LEEDMESLLN 150

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   N+      V  ++ ES  +  + S    LEV   AGG E+  +A  L  MY  ++ 
Sbjct: 151 QVR-NMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFAAELAEMYREYST 209

Query: 147 K-RKFKTEALEIHDGEEAGIKS-----------------ATLLIKGPNAYGWLKGEQGVH 188
             R ++ E  E   G  AG                          G N Y  L+ E GVH
Sbjct: 210 GVRNWRIEEAENGAGGAAGGGGGGGDASALSAPALASTGVKFKAIGDNVYRNLRHEIGVH 269

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           ++ R+   D + +  TS + + + PV+ D + + + E+DC+I+  R SG GGQ + ++ +
Sbjct: 270 KVQRVPLTDQDGKMQTSTAVVTLMPVL-DPVSVNVHENDCKIEFVRGSGPGGQGMQSSSN 328

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AV +THIP+G+ V+C Q RS   NK  A  ++  +L    ++ +    +    ++   G 
Sbjct: 329 AVCLTHIPSGISVKCHQSRSALGNKEIALQLVAQQLLAQRVKDQNSSLHEAWRNQWSSGE 388

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              ++R+Y   P   V D R   +    +  ++G
Sbjct: 389 RSDKMRTYNY-PQNRVTDHRLGKD-FPLNTFMEG 420


>gi|226510582|ref|NP_001146175.1| hypothetical protein LOC100279745 [Zea mays]
 gi|219886065|gb|ACL53407.1| unknown [Zea mays]
          Length = 184

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/167 (35%), Positives = 101/167 (60%), Gaps = 3/167 (1%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E+  +K + +   + E  G K+  + +KG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 61  GRVHTSTATVAIMPEA-DEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            + C +ERSQ +N+ +A+ +LRAKLYE++L  RE+  ++    K ++
Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKL--REQQESLRNQRKLQV 164


>gi|225714246|gb|ACO12969.1| Peptide chain release factor 1 [Lepeophtheirus salmonis]
          Length = 352

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 48/311 (15%)

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGE- 111
           S I  +Q  L +   L  +A EE D    +E  ++L +++ +V+          L+S + 
Sbjct: 50  SDIYALQTGLQEIEALKSMAQEEKDFE--KEVLEDLSKLEPQVDELVTRLANNILISNQR 107

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHD----GEEAGIK 166
            D ++A LEV  GAGG E+  +A  +  +Y  +  +   +  E  E  +     +   I 
Sbjct: 108 YDQDNAVLEVLPGAGGLEASVFAAEVFNLYCSYCRDYLGYNVEVQEHVETTGASDYFAIS 167

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A++LIKG                        + R  TS  S+ V P++ D   I+++ S
Sbjct: 168 KASILIKG----------------------SKSDRLQTSTRSLSVLPLLTDFSRIDVNPS 205

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  +   R+SG GGQ VNTT+SAVR+ H PT +   CQ+ R+ H+N   A   L+ +LY 
Sbjct: 206 DLSVTYCRSSGPGGQGVNTTNSAVRMIHNPTKISAHCQELRTAHENYGLALEKLKRELY- 264

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTN---IEKTSPSDVLD 340
             +   +E + +  + K++IG      +IR+Y       V D R      +  +  D + 
Sbjct: 265 -RVMFEKENSKVSSTRKSQIGQMNRNEKIRTYHYGRNT-VLDHRIQGVVKQVPNLFDFMK 322

Query: 341 GD-----LDDF 346
           G+     LD F
Sbjct: 323 GEYGFTILDQF 333


>gi|124507187|ref|XP_001352190.1| peptide release factor, putative [Plasmodium falciparum 3D7]
 gi|23505221|emb|CAD52001.1| peptide release factor, putative [Plasmodium falciparum 3D7]
          Length = 404

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 73/315 (23%), Positives = 145/315 (46%), Gaps = 11/315 (3%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRI 95
            ++I+ +        L+  +   K++   + D+    E    + +D + L    +++  +
Sbjct: 46  SDIIKLQKHSHMLHTLNEELDIYKQLLKEIIDSKESYEERLKKNEDINQLNCHIESVTNL 105

Query: 96  KLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            ++     ++S ++ +   D+ +  +E+ AG GG E++ ++  L  MY  +   R +  E
Sbjct: 106 IIDDIILFYKSYVNQDHHLDATEIKMEITAGVGGFEAKMFSKELFHMYENFCRVRNYDYE 165

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
             E+ + E    K+  L I+G N Y     E G+HR+ R+    ++++  TS S +++  
Sbjct: 166 MKEVINDEAKENKNIVLYIRGNNIYEDFYQENGIHRVQRVPI--NSNKVQTSTSIVFICD 223

Query: 214 VVDDSI----EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
                     +I  S+ D  I T R+ GAGGQ VN  ++ V+I H PT + V+ Q+  SQ
Sbjct: 224 EKKQKDNIMKKINFSKQDLLIQTKRSGGAGGQSVNKNETCVKILHKPTNIFVEVQKTSSQ 283

Query: 270 HKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
             NK  A  +L+ KLY      ++       ++ K       +IR+Y    + ++ D  T
Sbjct: 284 IHNKNLAMQLLKDKLYNFYYELEKNNFLKEKKNQKQSADRSHKIRTYNFL-HDVIIDHIT 342

Query: 329 NIEKTSPSDVLDGDL 343
           N + +   +   G +
Sbjct: 343 NTQYSGIQNFFKGHM 357


>gi|156084766|ref|XP_001609866.1| peptide chain release factor 2 [Babesia bovis T2Bo]
 gi|154797118|gb|EDO06298.1| peptide chain release factor 2, putative [Babesia bovis]
          Length = 281

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 75/226 (33%), Positives = 116/226 (51%), Gaps = 24/226 (10%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTR----WAEKRKFKTEAL----------- 155
           E D N   + + AG GGTE+ D+  ML RMY R    + +   +  E             
Sbjct: 39  EYDKNHCKVTITAGVGGTEAFDFCKMLGRMYKRFIQHYCQPESWNRELYGDLPRSLHYVD 98

Query: 156 -EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
             +  G++AG +     + G  AY   KGE+G HRLVR SPY++  +R T+FSS+ V P+
Sbjct: 99  GTVVPGDKAGYRILEFEVHGDYAYKLFKGEKGTHRLVRNSPYNAMRKRQTTFSSVQVVPL 158

Query: 215 VD-DSIEIE-------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +  D  +++       ++E D  ++T R+ G GGQ+VN  ++AVRITH  TG+ V+ Q E
Sbjct: 159 LSADDRDVQHYESSKHVTEKDVIVETMRSGGKGGQNVNKVETAVRITHKKTGLSVRVQTE 218

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           RSQ +N+  A   +   +     ++  E  N     + E  WGR +
Sbjct: 219 RSQSQNREIAMRRISEMVDAHYKEQLREKCNELRGEEVEADWGRHM 264


>gi|82540995|ref|XP_724771.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479536|gb|EAA16336.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 2075

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 10/240 (4%)

Query: 112  ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE-ALEIHDG-EEAGIKSAT 169
             + N   +E  +G GG E++ W+N L ++Y  +AEK+K   +   +  +           
Sbjct: 1834 LNKNHVRIEFRSGIGGDEAELWSNELKKIYQNYAEKKKCTVKSVKDATNSLIIKSPNDVK 1893

Query: 170  LLIKGPNA----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
            +  +G       Y   K E G+H++ RI   ++  +  +S ++I V+     + + EI+ 
Sbjct: 1894 INKEGEEIQISLYDLFKNESGIHQVKRIPKNENKEKIQSSTATIAVFIQDYAN-KYEINS 1952

Query: 226  SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             D +I T+R+S  GGQ+VN  +SAVRI H  TG+  + Q+ER+Q  NK  A   L  K++
Sbjct: 1953 KDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESQKERTQELNKKIAMKKLTQKIH 2012

Query: 286  ELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            +L  +++E+ + N       +     +IR+Y       + D   N +         G L+
Sbjct: 2013 DLRNREKEQSLQNERSKFTKDCSRSNRIRTYNFFT-GYITDHVKNRK-YDLMYFEKGKLE 2070


>gi|300770278|ref|ZP_07080157.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762754|gb|EFK59571.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 232

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKG 174
           D  + V AG G  E       +++   + A     + + L+  +G   G   SA+L I G
Sbjct: 2   DKIIGVTAGRGPEECSWVVAQVIKKIIQEAPTFDVEVQVLDRQEGSINGTVISASLKISG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            N   +     G  + +  S +  + +R   F  ++    +  S        D R    R
Sbjct: 62  ENCMAFSALWTGTIQWIGKSDFRKSHKRKNWFIEVF---EIKPSASWIFDVKDIRYQAMR 118

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVN   SAVR TH+PTGV V     RSQH+NK  A   L+ K+ EL L   +E
Sbjct: 119 SSGAGGQHVNKVSSAVRATHMPTGVSVVAMDSRSQHQNKKIATERLQTKVNELNLLHWKE 178

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQ 321
                  ++ ++  G  IR++V   ++
Sbjct: 179 NEKYKWFNQIQVERGNAIRTFVGTDFK 205


>gi|322829249|gb|EFZ32717.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 476

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 83/337 (24%), Positives = 150/337 (44%), Gaps = 35/337 (10%)

Query: 35  LWQ-----NVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDCSILQ 86
           LW       +  A+ +      L+  +    +I   +D + ++  LL + LEED  S+L 
Sbjct: 109 LWNIQYREEIDVAEEISGYLVKLNENVKLRDQILLEKDPVGEDRDLLSM-LEEDMESLLN 167

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   N+      V  ++ ES  +  + S    LEV   AGG E+  +A+ L  MY  ++ 
Sbjct: 168 QVR-NMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFASELAEMYREYST 226

Query: 147 K-RKFKTEALEIHDGEEAGIKS--------------------ATLLIKGPNAYGWLKGEQ 185
             R ++ E  E   G   G  +                          G + Y  L+ E 
Sbjct: 227 GVRNWRIEEAENGAGGGGGGAAGGGGGGDASALSAPALASTGVKFKAIGDSVYRNLRHEI 286

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVH++ R+   D + +  TS + + + PV+ D + + + E+DC+I+  R SG GGQ + +
Sbjct: 287 GVHKVQRVPLTDQDGKMQTSTAVVTLMPVL-DPVSVNVHENDCKIEFVRGSGPGGQGMQS 345

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           + +AV +THIP+G+ V+C Q RS   NK  A  ++  +L    ++ +    +    ++  
Sbjct: 346 SSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQLLAQRVKDQNSSFHEAWRNQWS 405

Query: 306 IG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            G    ++R+Y   P   V D R   +    +  ++G
Sbjct: 406 SGERSDKMRTYNF-PQNRVTDHRLGKD-FPLNTFMEG 440


>gi|315497766|ref|YP_004086570.1| peptide chain release factor h [Asticcacaulis excentricus CB 48]
 gi|315415778|gb|ADU12419.1| peptide chain release factor H [Asticcacaulis excentricus CB 48]
          Length = 208

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 5/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L + +G G  E       L R +TR A K     E   I+ GEE    S  + + G  
Sbjct: 4   IILHLTSGKGPDECCWVVAQLSRAFTREALKDGVACEV--INSGEE-LPASLLMSVTGDQ 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A  ++    G  + +  SP+    +R   F  + + P  D   +  + + D    T RAS
Sbjct: 61  AQAFVSARVGTIQWIGDSPFRPRHKRRNWFVGVNIAPSPDAMPD--LRDEDIVFQTMRAS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR TH  TG+VV  Q++RSQH N+  A   L   L E   +  +   
Sbjct: 119 GPGGQHVNKTDSAVRATHRSTGLVVTAQEQRSQHANRKLARQKLAVLLDEQRQKASDSAR 178

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQM 322
            +  S+   +  G+ +R+Y    + +
Sbjct: 179 QVQWSAHQNLERGKSVRTYTGPLFSL 204


>gi|315254829|gb|EFU34797.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
          Length = 155

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/141 (43%), Positives = 91/141 (64%), Gaps = 2/141 (1%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHK
Sbjct: 1   MPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHK 60

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNI 330
           NKA+A ++L A+++  E+ KR++       +    G    + R+Y   P   V D R N+
Sbjct: 61  NKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINL 119

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
                 +V++G LD  ++  +
Sbjct: 120 TLYRLDEVMEGKLDMLIEPII 140


>gi|23010857|ref|ZP_00051405.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 94/110 (85%), Positives = 104/110 (94%)

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI ESDCRIDTYR+SGAGGQHVNTT
Sbjct: 1   MHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKESDCRIDTYRSSGAGGQHVNTT 60

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           DSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE A
Sbjct: 61  DSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKA 110


>gi|323333643|gb|EGA75036.1| Mrf1p [Saccharomyces cerevisiae AWRI796]
          Length = 311

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 70/220 (31%), Positives = 102/220 (46%), Gaps = 14/220 (6%)

Query: 49  RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQF 104
              L        E +++L +   L E+ +   D S+  E       +  + E        
Sbjct: 85  YAKLSALTDTFIEYKEKLNELKSLQEMIV--SDPSLRAEAEQEYAELVPQYETTSSRLVN 142

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA- 163
           + L         + LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E   
Sbjct: 143 KLLPPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGS 202

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GI  A L I+   +Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D     I
Sbjct: 203 GIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSI 262

Query: 224 S-------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
                     + R+D  RASG GGQHVNTTDSAVR+THIP
Sbjct: 263 DAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIP 302


>gi|307943084|ref|ZP_07658429.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
 gi|307773880|gb|EFO33096.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
          Length = 217

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 2/209 (0%)

Query: 113 DSND-AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           D  D A L V +G G  E +   +++L   T  A K +   E     +G      SA L 
Sbjct: 7   DKTDTARLLVTSGDGPRECRRAVSLVLARITTEAAKLRVNVEETLSTEGPNQDPASAILR 66

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G +A    K   G  R    SP+  + +R   F  ++      D  E  +S SD + +
Sbjct: 67  LSGKDASEIAKRWTGTIRWTCQSPFRPHHKRKNWFVGVFALATERDQTET-LSPSDLKFE 125

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T+RA G GGQH NTTDSAVR+TH+PTG+ V  + ERSQH+N+A A N L  +LY L  + 
Sbjct: 126 TFRAGGPGGQHQNTTDSAVRLTHLPTGLSVVARDERSQHRNRAAALNRLHDRLYLLAAEA 185

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPY 320
                +       ++  G    S+    +
Sbjct: 186 DAGAKSSENLLHRQLERGNATLSFKGPSF 214


>gi|221054928|ref|XP_002258603.1| peptide release factor [Plasmodium knowlesi strain H]
 gi|193808672|emb|CAQ39375.1| peptide release factor, putative [Plasmodium knowlesi strain H]
          Length = 407

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 38/338 (11%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ---NVIEAKMLMRER--QHLDNAISFIKEIQDRLCDNL 70
                  L       ++        N       ++E     L +    IKE+   + D  
Sbjct: 66  LKTLHDDLDVYTELFQESGFIDGGLNPD---KTIQEVKSSSLMDTDDDIKELLRTIEDVG 122

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL           LQE  D  + +     +           D+ +  +E+  G GG E+
Sbjct: 123 SLL-----------LQEVVDFYKSVVNTEHHL----------DTEEVKVEITPGVGGLEA 161

Query: 131 QDWANMLLRMYTRWAEKRKFKTE-ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + + N L  MY ++ +++ F+        +  + G +S   +IKG   Y     E G+HR
Sbjct: 162 KLFCNDLFSMYEQFCKEKNFQCNLIKGESEDTKDGYRSIVAIIKGERVYEHFVQENGIHR 221

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE----ISESDCRIDTYRASGAGGQHVNT 245
           + RI    ++ +  TS S ++V        +I+      ++D  I+T R+ GAGGQ VN 
Sbjct: 222 VQRIPV--NSKKIQTSTSVVFVSDEESLKKKIQKKMNFGKNDLLIETKRSGGAGGQSVNK 279

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKT 304
            ++ V+I H PT + V+ Q+  SQ +N++ A   L+ KL+    Q+ +++     +S K 
Sbjct: 280 NETCVKILHKPTNLSVEVQKTSSQIQNRSMAIQALKNKLFSFYYQQEKDLYFKYKKSHKM 339

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
                 +IR+Y       + D   N++         GD
Sbjct: 340 SGDRSEKIRTYNFV-GNFITDHLRNVQYPGIDLFFRGD 376


>gi|71900159|ref|ZP_00682300.1| PCRF [Xylella fastidiosa Ann-1]
 gi|71730108|gb|EAO32198.1| PCRF [Xylella fastidiosa Ann-1]
          Length = 270

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 10/196 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV--EYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131
                D  + +     +   +  +    +Q + LL      D  + +LEV AG GG E+ 
Sbjct: 69  ---RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK---GEQGVH 188
            +A  L RMYTR+AE++++K E      GE  G K     I G  AY  LK        +
Sbjct: 126 IFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKLNPAHTAYN 185

Query: 189 RLVRISPYDSNSRRHT 204
             ++ +P D++  +  
Sbjct: 186 ACLQPNPRDASILQQP 201


>gi|326334366|ref|ZP_08200579.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325693450|gb|EGD35376.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 233

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 4/205 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
            +++ AG G  E Q     +L+++ + A +       L   +G+    +KS T+ +KG  
Sbjct: 5   IIQITAGRGPLECQWVVAKVLKVFLQEATQAGISYTILSREEGDANLTVKSVTVQLKGKE 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              +LK   G    V  S +    +R   +  ++    +        SE D +  T R+ 
Sbjct: 65  LAAFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVFELDQLQRQP---FSECDVQFQTTRSQ 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+  E A
Sbjct: 122 GNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKFALARLKEKLIEIELQQLSEQA 181

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               ++ T++  G  +R++    ++
Sbjct: 182 QSHWNNHTQVQRGNPVRTFKGTDFK 206


>gi|242021553|ref|XP_002431209.1| peptide chain release factor, putative [Pediculus humanus corporis]
 gi|212516458|gb|EEB18471.1| peptide chain release factor, putative [Pediculus humanus corporis]
          Length = 413

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 41/348 (11%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S     L  L+D ++  + +SF+   ++  +   N +       E+++++     I + +
Sbjct: 45  SSNSQDLSDLYDNESMKKYISFIE--SDHVNFSDNFL-------EKKYIEEIRHSIDKKK 95

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +  C+ L L  +  EE    IL    D  +  ++E+                     +  
Sbjct: 96  EIECEILALNTVNSEE---KILPHNFDGGEESQIEIH--------------------IFP 132

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
             GG E++ +A  L  MY  +   + +     EI    + G     L ++G   Y  L  
Sbjct: 133 AVGGEEAKYFAEELFNMYVNYIIYKNWNCIRAEIKQDTKVGH----LTLQGNTIYNSLIC 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +   R HTS  S+ ++    ++ EI I+  D  I+T R+ G GGQ+V
Sbjct: 189 EAGVHRVQRVPETEKFGRTHTSTCSLNIFQKSLNN-EIIINPKDIIIETLRSGGPGGQNV 247

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESS 302
           N  ++ VRI HIPTG++++ Q+ R Q++NK +A+  L++ L  +   K         +  
Sbjct: 248 NKVETRVRIKHIPTGLIIESQESRYQYENKIKAFKKLQSTLLNMYEDKINSSKKATLKDQ 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
                +  +IR+Y       + D R N    +    L G  +LDD ++
Sbjct: 308 TGNNDYSDKIRTYNFN-QNRITDHRINYSLYNMDAFLSGGKELDDMIE 354


>gi|329848554|ref|ZP_08263582.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
 gi|328843617|gb|EGF93186.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
          Length = 208

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 5/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L + +G G  E       L + +TR   ++       ++ D  EA   S  L + G  
Sbjct: 4   IILHISSGKGPDECCWVVTKLAQAFTREGAEQG---VTCDVLDAGEALPASLLLSVSGEA 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A  +++   G  + V  SP+    +R   F  + + P      +  + ESD    T RAS
Sbjct: 61  APAFVRERIGTIQWVGDSPFRPLHKRRNWFVGVALAPSPQSVPD--LRESDITFSTMRAS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR  H PTG+V   Q++RSQH N+  A   L   L E  ++   +  
Sbjct: 119 GPGGQHVNKTDSAVRAVHRPTGLVATAQEQRSQHANRKLATLKLALMLEERRVEAGGQAR 178

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQM 322
               S+   +  G  +R+Y+   +++
Sbjct: 179 RDQWSAHQALERGNPVRTYIGPHFKL 204


>gi|73667063|ref|YP_303079.1| class I peptide chain release factor domain-containing protein
           [Ehrlichia canis str. Jake]
 gi|72394204|gb|AAZ68481.1| Class I peptide chain release factor domain [Ehrlichia canis str.
           Jake]
          Length = 173

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 9/162 (5%)

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHR+ R+   +++ R +TS +++ V P + + ++++I E D RID YR+SG GG
Sbjct: 1   MKFESGVHRVQRVPETEASGRLYTSAATVAVLPEI-EEVDLKIDEKDLRIDVYRSSGPGG 59

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVRITHIP+G+VV  + E+SQHKNK  A  +LRA+LY LE  K++  + I +
Sbjct: 60  QSVNTTDSAVRITHIPSGIVVIQRDEKSQHKNK--ALKVLRARLYNLE--KQKRDSEISQ 115

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             K++IG G    +IR+Y   P   + D R N+      D++
Sbjct: 116 MRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIM 156


>gi|237840539|ref|XP_002369567.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211967231|gb|EEB02427.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221503426|gb|EEE29124.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 497

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 54/305 (17%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +  Q    EVE    ++ L  E +S +   A +E+   AGG E+Q WA  L  MYTR+ 
Sbjct: 153 REATQERLREVEASIEKTALLPEKESRNENVAIVEIRPAAGGEEAQLWATDLAEMYTRFF 212

Query: 146 E-KRKFKT-----------------------------------------EALEIHDGEEA 163
             ++ ++                                          +      G   
Sbjct: 213 TLQKGWRFSQLQLGGPNAGSRPPTQQRREDAVSGKRRAHANSSDSAAKDDGRSALSGALG 272

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G+      ++GP  Y  L  E GVHR+ R+   ++  R HTS +++ +     +   +EI
Sbjct: 273 GVTCIAFRVEGPGVYRQLLKESGVHRVQRVPRTEAQGRIHTSTATVAIVAE-HNFRGVEI 331

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +++D  I T R+SG GGQ+VN  ++AV + H+PTG+ V CQQER+Q  NK  A  +L  K
Sbjct: 332 NDADLVIRTARSSGCGGQNVNKVETAVDLLHVPTGIRVFCQQERTQAANKKAAKAVLLKK 391

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR--TNIEKTSPSDV 338
           L      + E +  + E  + ++  G    ++R+Y  +    V + R        S   V
Sbjct: 392 L--AARHEEEVVQQMREERRDQVSSGLRSERVRTYNFRD-GRVNEHRLTGGEGLFSLKSV 448

Query: 339 LDGDL 343
           L+G L
Sbjct: 449 LEGQL 453


>gi|146301198|ref|YP_001195789.1| peptide chain release factor-like protein [Flavobacterium
           johnsoniae UW101]
 gi|146155616|gb|ABQ06470.1| Class I peptide chain release factor [Flavobacterium johnsoniae
           UW101]
          Length = 229

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 4/208 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS-ATLLIKGPN 176
            +++ AG G  E       +L+     A+ +      L+   GEE G    A++ +KG N
Sbjct: 4   IIQITAGRGPAECTWVVAQVLKKVLEEAQDQNLDVVLLQREKGEENGTIETASISVKGKN 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A  ++K   G  + +  S +    +R   F  I+    ++      +SE+D +    R+S
Sbjct: 64  ADQFVKSWIGTIQWIGQSQFRKMHKRKNWFIGIF---EIEPQKNASVSENDIQYQAMRSS 120

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN   SA+R THIPTG+ V     RSQH+NK  A   L  KL + +L + +   
Sbjct: 121 GAGGQHVNKVSSAIRATHIPTGIAVVAMDSRSQHQNKKLATERLLKKLEDEKLVQLKNHV 180

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                ++  +  G  IR +    ++ +K
Sbjct: 181 GKQWENQLNVERGNPIRVFTGSDFKKIK 208


>gi|227112372|ref|ZP_03826028.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 207

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 6/209 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L   TR A ++    E +E   G+ AG  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATTKALHALTRDAARQGVNCEIIETEAGKRAGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  +  +       + EI     R +  ++
Sbjct: 62  QAEPLAANWCGTLQWTCNSPWRKGGGRKNWFIGVARFHQEQAFADHEI-----RFEATKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                    +I  G  ++ +  + + +V 
Sbjct: 177 RPQRRLFHHQIERGNPVKVFKGEDFTLVT 205


>gi|228472445|ref|ZP_04057207.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276130|gb|EEK14877.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 231

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 4/205 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
            +++ AG G  E Q     +L+ + + A +       L   +G+    +KS TL +KG  
Sbjct: 5   IIQITAGRGPLECQWVVAKVLKTFLQEATQAGISYTILSREEGDANLTVKSVTLQLKGKE 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              +LK   G    V  S +    +R   +  ++    +   +    SE D +  T R+ 
Sbjct: 65  LASFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVFELDQLQRQL---FSERDVQFQTTRSQ 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+  E A
Sbjct: 122 GNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQLAEQA 181

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               ++ T++  G  +R++    ++
Sbjct: 182 QNHWNNHTQVQRGNPVRTFKGTDFK 206


>gi|261822834|ref|YP_003260940.1| peptide chain release factor-like protein [Pectobacterium wasabiae
           WPP163]
 gi|261606847|gb|ACX89333.1| peptide chain release factor H [Pectobacterium wasabiae WPP163]
          Length = 207

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L+   R A ++  ++E +E   G+ AG  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALIRDAARQGIESEIIETEAGKRAGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  I  +       + EI     R +T ++
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIARFHQERAFADNEI-----RFETTKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                    +I  G  I+ +  + + +V 
Sbjct: 177 RAQRRLFHHQIERGNPIKVFKGEDFTLVT 205


>gi|301347115|ref|ZP_07227856.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301512357|ref|ZP_07237594.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301597511|ref|ZP_07242519.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 113

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKLYELE+QKR E A   E 
Sbjct: 1   HINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALED 60

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L 
Sbjct: 61  SKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLDRFIEASLK 110


>gi|319637886|ref|ZP_07992652.1| peptide chain release factor H [Neisseria mucosa C102]
 gi|317401041|gb|EFV81696.1| peptide chain release factor H [Neisseria mucosa C102]
          Length = 206

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 2/205 (0%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L      A+ +    E +     ++ GI SATL ++G  
Sbjct: 2   IYLQISTAQGPAECRIFARFVLGKLLAEAQAKGIDAELVTET-ADKHGILSATLKLEGQK 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + +  SP      R   +  ++  P +  + E+  SE+     T R+ 
Sbjct: 61  AESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQTYEM-PSENGIEFQTCRSG 119

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    +    A
Sbjct: 120 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGSFA 179

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               +   ++  G   R++V   ++
Sbjct: 180 QEQHAQLYQVERGNPKRTFVGTAFK 204


>gi|261379932|ref|ZP_05984505.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
 gi|284797642|gb|EFC52989.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
          Length = 212

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 2/205 (0%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L      A+ +    E +     ++ GI SATL ++G  
Sbjct: 8   IYLQISTAQGPAECRIFARFVLGKLLAQAQAKGIDAELVTET-ADKHGILSATLKLEGQK 66

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + +  SP      R   +  ++  P +    E+  SE+     T R+ 
Sbjct: 67  AESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQMYEM-PSENGIEFQTCRSG 125

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    +    A
Sbjct: 126 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGSFA 185

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               +   ++  G   R++V   ++
Sbjct: 186 QEQHAQLYQVERGNPKRTFVGATFK 210


>gi|213963016|ref|ZP_03391275.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
 gi|213954357|gb|EEB65680.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
          Length = 230

 Score =  138 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 4/205 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
            +++ AG G  E Q     +L+ + + A +       L   +G+    +KS TL +KG  
Sbjct: 5   IIQITAGRGPLECQWVVAKVLKTFLQEAAQAGIDYTILSREEGDANLTVKSVTLQLKGKE 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              +LK   G    V  S +    +R   +  ++    +        SE D +  T R+ 
Sbjct: 65  LAPFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVFELDQLQRQT---FSERDVQFQTTRSQ 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+  E A
Sbjct: 122 GNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQLAEQA 181

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               ++ T++  G  +R++    ++
Sbjct: 182 QSHWNNHTQVQRGNPVRTFKGTDFK 206


>gi|50122538|ref|YP_051705.1| peptide chain release factor-like protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613064|emb|CAG76515.1| putative peptide chain release factor [Pectobacterium atrosepticum
           SCRI1043]
          Length = 207

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L   TR A ++  + E +E   G+ AG  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALHALTRDAARQGIECEIIETEVGKRAGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  +  +       + EI     R +T ++
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVARFHQEQAFADDEI-----RFETTKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                    +I  G  ++ +  + + +  
Sbjct: 177 RAQRRLFHHQIERGNPVKVFKGEDFTLAT 205


>gi|227325964|ref|ZP_03829988.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 207

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 6/211 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L+  TR A ++  + E +E   G+ +G  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALTRDAARQGIECEVIETEAGKRSGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  I  +       + EI     R +  ++
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIARFHQEQAFADNEI-----RFEATKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
                    +I  G  ++ +  + + +V   
Sbjct: 177 RAQRRLFHHQIERGNPVKVFKGEDFTLVVSH 207


>gi|296775660|gb|ADH42937.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 181

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/159 (42%), Positives = 97/159 (61%), Gaps = 3/159 (1%)

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
                 HTS +++ + P   + ++I+I++SD RID +R+SG GGQ VNTTDSAVRITH P
Sbjct: 15  RRRVEVHTSAATVAILPEA-EDVDIKINDSDLRIDVFRSSGPGGQSVNTTDSAVRITHGP 73

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSY 315
           +G+VV  Q E+SQHKNKA+A  +LRA+LYE E  K+E   +    S+   G    +IR+Y
Sbjct: 74  SGIVVTQQDEKSQHKNKAKALKILRARLYESEKLKKERQRSSERKSQIGTGDRSERIRTY 133

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              P   V D R N      +D L+G++ + M   L +K
Sbjct: 134 NF-PQGRVTDHRINFTLHKLTDFLNGEIHEEMNENLRLK 171


>gi|95007275|emb|CAJ20495.1| peptide chain release factor 1, putative [Toxoplasma gondii RH]
 gi|221482780|gb|EEE21111.1| peptide chain release factor, putative [Toxoplasma gondii GT1]
          Length = 497

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 54/305 (17%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +  Q    EVE    ++ L  E ++ +   A +E+   AGG E+Q WA  L  MYTR+ 
Sbjct: 153 REATQERLREVEASIEKTALLPEKEARNENVAIVEIRPAAGGEEAQLWATDLAEMYTRFF 212

Query: 146 E-KRKFKT-----------------------------------------EALEIHDGEEA 163
             ++ ++                                          +      G   
Sbjct: 213 TLQKGWRFSQLQLGGPNAGSRPPTQQRREDAVSGKRRAHANSSDSAAKDDGRSALSGALG 272

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G+      ++GP  Y  L  E GVHR+ R+   ++  R HTS +++ +    +    + I
Sbjct: 273 GVTCIAFRVEGPGVYRQLLKESGVHRVQRVPRTEAQGRIHTSTATVAIVAEHNFQG-VAI 331

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +++D  I T R+SG GGQ+VN  ++AV + H+PTG+ V CQQER+Q  NK  A  +L  K
Sbjct: 332 NDADLVIRTARSSGCGGQNVNKVETAVDLLHVPTGIRVFCQQERTQAANKKAAKAVLLKK 391

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR--TNIEKTSPSDV 338
           L      + E +  + E  + ++  G    ++R+Y  +    V + R        S   +
Sbjct: 392 L--AARHEEEVVQQMREERRDQVSSGLRSERVRTYNFRD-GRVNEHRLTGGEGLFSLKSI 448

Query: 339 LDGDL 343
           L+G L
Sbjct: 449 LEGQL 453


>gi|325267596|ref|ZP_08134248.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324980946|gb|EGC16606.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 202

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 5/204 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++  G    E Q +A   LR   R AE      E L      + G++SA + + G  
Sbjct: 2   IYLQLSTGQAPAECQYFARFALRQMLREAEAAGLDVEILSETPS-KHGLRSAVVAVSGSL 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              + +   G  + V  SP+  N  R   F ++   P      E    E + R +T RA 
Sbjct: 61  QDNFAQRWLGTLQWVCASPFRPNHARKNWFVAVSRLPDFPALPE----EGEVRFETCRAG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR  H  TG+ V+ + ERSQH NK +A  +L  KL     ++    A
Sbjct: 117 GKGGQHVNKTESAVRAVHTATGISVRVESERSQHANKKRALELLAVKLAAQHAEQMGRHA 176

Query: 297 NIGESSKTEIGWGRQIRSYVLQPY 320
               +   ++  G  +R +  + +
Sbjct: 177 ADAHAQLYQLERGNAVRVFRGKTF 200


>gi|156081736|ref|XP_001608361.1| peptide release factor [Plasmodium vivax SaI-1]
 gi|148800932|gb|EDL42337.1| peptide release factor, putative [Plasmodium vivax]
          Length = 446

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 67/273 (24%), Positives = 129/273 (47%), Gaps = 13/273 (4%)

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDWANM 136
           +DD   L    +++  + L+     ++S+++ E   D+++  LE+  G GG E++ + + 
Sbjct: 147 DDDVRQLLRAVEDVGSLLLQDVVDFYKSVVNAEHHLDTDEVKLEITPGVGGLEAKLFCSD 206

Query: 137 LLRMYTRWAEKRKFKTE-ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL MY  + + + F+        D  + G ++   ++KG   Y     E G+HR+ R+  
Sbjct: 207 LLSMYEHFCKLKDFQCTLIRGESDDAKDGHRNIVAVVKGERVYEHFVQENGIHRVQRVPV 266

Query: 196 YDSNSRRHTSFSSIWVYPV----VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
             ++ +  TS S ++VY           ++ + +SD  I+T R+ G GGQ VN  ++ V+
Sbjct: 267 --NSKKIQTSTSVVFVYDEESLRKKIKKKMNLKKSDLIIETKRSGGPGGQSVNKNETCVK 324

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--GWG 309
           + H PT + V+ Q+  SQ +N+  A   L+ KL+     ++E+          ++     
Sbjct: 325 VLHKPTNISVEVQKTSSQMQNRNMAIEALKTKLFSFY-YQQEKDLFFKCRRSHKMSGDRS 383

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
            +IRSY       V D  +N++         GD
Sbjct: 384 EKIRSYNFI-NDFVTDHLSNVQYPGIDLFFRGD 415


>gi|294949753|ref|XP_002786323.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239900543|gb|EER18119.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 423

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 84/341 (24%), Positives = 146/341 (42%), Gaps = 45/341 (13%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELA--LEEDDCSIL----QETSDNLQRIKLEVEYKQF 104
            L    S + E+     +   L + +  LE +D S+      E    L++I +E+E + F
Sbjct: 70  ELAPYFSMVDEMLSVSDEIAKLEQESAKLERNDISMKSMFNAEVDSQLEKI-IEIENRLF 128

Query: 105 ESL---LSGE-----------ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
           + L   +S E            D++D  +E+  G GG E+  W   +  M  R+A    +
Sbjct: 129 DHLHTRMSNEGIDCATWHAYVKDASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGW 188

Query: 151 KT-EALEIHDGEEAGIKSAT---LLIKG------PNAYGWLKGEQGVHRLVRISPYDSNS 200
              E   +  G ++G +       L  G         +G+LK E G+HR+ R+  + ++S
Sbjct: 189 AAPEVKVMEQGWQSGYRQIIADFFLKPGVKRTPEKGIFGYLKFEAGIHRVQRVPSWPADS 248

Query: 201 RRHTSFSSIWV--YPVVDDSIEIEISESDCR-IDTYRASGAGGQHVNTTDSAVRITHIPT 257
              TS  S+ V      + ++   +   + +   T ++SG GGQ VN    AVRI HI +
Sbjct: 249 LPQTSACSVVVLPREDPNSNLIPVLKPHEYKVWITKKSSGPGGQCVNAAHQAVRIRHIES 308

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           GV       R+   NKA A   +  K+  +E + ++     G   K  +G G    +IRS
Sbjct: 309 GVEGFADCYRALKSNKALALQQVSQKI--MEEKGKKIAKERGIIRKQHMGSGDRSEKIRS 366

Query: 315 YVLQPYQMVKDLR---TNIEKTSPSDVLDGD--LDDFMKAT 350
           Y      +V D R   +     +  +++DG+  L D ++  
Sbjct: 367 YNYLNGTVV-DHRLPKSEDGPNALEEIMDGEGLLHDIIEPL 406


>gi|301019126|ref|ZP_07183330.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
 gi|300399385|gb|EFJ82923.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
          Length = 204

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQKNSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|255024491|ref|ZP_05296477.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 165

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   + L  ++ E    +   + LL      D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEELAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
            +A  L RMY+++AE R +K E ++ +     G K    ++
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165


>gi|117622538|ref|YP_851451.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
 gi|115511662|gb|ABI99736.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
          Length = 232

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 6/208 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
                L++ +  G  E        L    + A ++      LE   G     ++SA + +
Sbjct: 27  KRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISL 86

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T
Sbjct: 87  DGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYET 141

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +  
Sbjct: 142 LRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENS 201

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPY 320
             + +       +I  G   R++    +
Sbjct: 202 AALKSQRRMFHHQIERGNPRRTFTGMAF 229


>gi|1149684|emb|CAA60204.1| prfA [Clostridium perfringens]
          Length = 136

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 7/139 (5%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            +++ V P V D +EIEI++ D +ID +RASG GGQ VNTTDSAVRITH+P+G+VV CQ 
Sbjct: 1   TATVAVLPEV-DDVEIEINDKDIKIDVFRASGNGGQCVNTTDSAVRITHLPSGLVVSCQD 59

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           E+SQ KNK +A  +LRA+L+  E  + E +A I E  K+++G G    +IR+Y   P   
Sbjct: 60  EKSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVGTGDRSERIRTYNY-PQGR 116

Query: 323 VKDLRTNIEKTSPSDVLDG 341
           V D R N+        L+G
Sbjct: 117 VTDHRINMTLYKLDSFLEG 135


>gi|294668973|ref|ZP_06734059.1| putative peptide chain release factor H [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308965|gb|EFE50208.1| putative peptide chain release factor H [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 205

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 5/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L+     AE R  K E       ++ GI SA L+++G  
Sbjct: 2   IYLQISTAQGPAECRIFARFVLKKLLAEAEARNVKAEIAGET-ADKHGILSAVLILEGAA 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + V  SP      R   +  I+  P   +      SES+    T R+ 
Sbjct: 61  ADTLAQSWQGTLQWVCASPVRPKHPRKNWYIGIFRLPEKPEMP----SESEIEFQTCRSG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK +A  +L  K+ E +  +  + A
Sbjct: 117 GKGGQHVNKTESAVRATHKASGISVRVESERSQHANKKRALELLAYKMAEHQTAQNADYA 176

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               S   ++  G   R +    ++
Sbjct: 177 KQQHSGLYQVERGNPKRVFEGPGFR 201


>gi|255067533|ref|ZP_05319388.1| putative peptide chain release factor H [Neisseria sicca ATCC
           29256]
 gi|255048154|gb|EET43618.1| putative peptide chain release factor H [Neisseria sicca ATCC
           29256]
          Length = 219

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 5/212 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L      A+    + E +     ++ G+ SA L + G +
Sbjct: 13  IYLQISTAQGPAECRIFARFVLGRLLAEAKAESVEAEIISET-ADKHGMMSAVLKLDGKH 71

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + +  SP      R   +  ++  P + D      SES+    + R+ 
Sbjct: 72  AETLAQRWQGSLQWICASPVRPKHPRKNWYIGVFRMPDMPDMP----SESEIEFQSCRSG 127

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    + +  A
Sbjct: 128 GKGGQHVNKTESAVRATHKASGISVRVESERSQHANKKLALTLLTQKLAEHHAGQTDNYA 187

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
               S   ++  G   R++    ++   D ++
Sbjct: 188 RAQHSRLYQVERGNPKRTFAGTEFKEKPDAKS 219


>gi|237707745|ref|ZP_04538226.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|306813274|ref|ZP_07447467.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|91070898|gb|ABE05779.1| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|226898955|gb|EEH85214.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|281177449|dbj|BAI53779.1| peptide chain release factor [Escherichia coli SE15]
 gi|294492701|gb|ADE91457.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli IHE3034]
 gi|305854037|gb|EFM54476.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|307628262|gb|ADN72566.1| peptide chain release factor-like protein [Escherichia coli UM146]
 gi|315287746|gb|EFU47149.1| putative peptide chain release factor H [Escherichia coli MS 110-3]
 gi|320197281|gb|EFW71897.1| peptide chain release factor-like protein [Escherichia coli
           WV_060327]
 gi|323953122|gb|EGB48990.1| RF-1 domain-containing protein [Escherichia coli H252]
 gi|323958696|gb|EGB54397.1| RF-1 domain-containing protein [Escherichia coli H263]
 gi|324010206|gb|EGB79425.1| putative peptide chain release factor H [Escherichia coli MS 57-2]
          Length = 204

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|227884748|ref|ZP_04002553.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300977367|ref|ZP_07173858.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|301045877|ref|ZP_07193064.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|331656314|ref|ZP_08357276.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331681653|ref|ZP_08382286.1| putative peptide chain release factor H [Escherichia coli H299]
 gi|26106678|gb|AAN78863.1|AE016756_46 Peptide chain release factor homolog [Escherichia coli CFT073]
 gi|222032084|emb|CAP74823.1| Peptide chain release factor homolog [Escherichia coli LF82]
 gi|227838349|gb|EEJ48815.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300302127|gb|EFJ58512.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|300409892|gb|EFJ93430.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|307552166|gb|ADN44941.1| peptide chain release factor-like protein [Escherichia coli ABU
           83972]
 gi|312944860|gb|ADR25687.1| peptide chain release factor-like protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315295160|gb|EFU54495.1| putative peptide chain release factor H [Escherichia coli MS 153-1]
 gi|315300862|gb|EFU60084.1| putative peptide chain release factor H [Escherichia coli MS 16-3]
 gi|323191394|gb|EFZ76656.1| putative peptide chain release factor H [Escherichia coli RN587/1]
 gi|331054562|gb|EGI26571.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331080855|gb|EGI52020.1| putative peptide chain release factor H [Escherichia coli H299]
          Length = 204

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVRKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|121730460|ref|ZP_01682775.1| conserved domain protein [Vibrio cholerae V52]
 gi|121627803|gb|EAX60412.1| conserved domain protein [Vibrio cholerae V52]
          Length = 156

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A E DD  + +   D ++  K  +E      Q   L     D  + +LE+ AGAGG E+ 
Sbjct: 69  AQE-DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAG 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDG 160
            +A  L RMY+R+AEK+ ++ E +   + 
Sbjct: 128 IFAGDLFRMYSRFAEKKGWRIEVMSSSEA 156


>gi|221060184|ref|XP_002260737.1| Peptide chain release factor [Plasmodium knowlesi strain H]
 gi|193810811|emb|CAQ42709.1| Peptide chain release factor, putative [Plasmodium knowlesi strain
           H]
          Length = 263

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 8/221 (3%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE-ALEIHDGE-EAGIKSATL 170
           + N   +E   G GG E+  W+  LL  Y  +AE+   + E   +  +           +
Sbjct: 20  NKNCVRIEFRPGVGGEEAFLWSTELLNTYKAFAERINCRVERVHDASESLLVVSPSDVCI 79

Query: 171 LIKGPNA----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             +G       Y  LK E G+H++ R+   +S  + H+S ++I V+   D+  + EI+  
Sbjct: 80  TQEGYEIKTTLYDLLKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHEDEQKKDEINLK 139

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RI T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER+Q  NK  A   L  K+ +
Sbjct: 140 DLRITTFRSSKPGGQNVNKIESGVSILHKPTGIKTECQEERTQEMNKKIAMKRLIQKVLQ 199

Query: 287 LELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
              ++  EE+         +     +IR+Y       + D 
Sbjct: 200 FRHKQSEEELRGERAKLIKDSSRSSRIRTYNFF-RGYITDH 239


>gi|191171385|ref|ZP_03032934.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300991271|ref|ZP_07179531.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|110342064|gb|ABG68301.1| putative peptide chain release factor [Escherichia coli 536]
 gi|190908319|gb|EDV67909.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300305588|gb|EFJ60108.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|324015571|gb|EGB84790.1| putative peptide chain release factor H [Escherichia coli MS 60-1]
          Length = 204

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|260853488|ref|YP_003227379.1| putative peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|260866434|ref|YP_003232836.1| putative peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|257752137|dbj|BAI23639.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|257762790|dbj|BAI34285.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|323178470|gb|EFZ64048.1| putative peptide chain release factor H [Escherichia coli 1180]
          Length = 204

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGHYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            ++      +I  G   R++    +
Sbjct: 177 KSLRRMFHHQIERGNPRRTFTGMAF 201


>gi|15896625|ref|NP_349974.1| protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|15026468|gb|AAK81314.1|AE007835_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510788|gb|ADZ22424.1| Protein chain release factor B [Clostridium acetobutylicum EA 2018]
          Length = 204

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPN 176
           +L++ AG G  ES  +  + L +  +  + R  K E L+   GE+ G  KS  L + G  
Sbjct: 2   WLQISAGTGPVESCRFVYLFLNLVKKECKYRNIKIEVLDFVPGEKIGTLKSVFLKLSGEG 61

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A  +     G H L+  S Y  N RR   F ++            ++++ D  I+  R+S
Sbjct: 62  AKTYASSITGTHLLIWESEYRKNHRRKNWFIAV---NSFSYETNEDLNDKDIIIEKMRSS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T++AVRITH  TG+VV   +ERSQ  N   A   L  +L +L  ++R+   
Sbjct: 119 GKGGQHVNKTETAVRITHKKTGIVVNSSEERSQFANIKLAKARLIIELKKLSDERRKRNR 178

Query: 297 NIGESSKTEIGWGRQIRSYVLQ 318
           +   ++   I  G  +  Y  +
Sbjct: 179 SERWTAGINIVRGNPVNVYTYK 200


>gi|194432592|ref|ZP_03064878.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|194419153|gb|EDX35236.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|320178936|gb|EFW53898.1| peptide chain release factor-like protein [Shigella boydii ATCC
           9905]
 gi|332085764|gb|EGI90928.1| putative peptide chain release factor H [Shigella dysenteriae
           155-74]
 gi|332094999|gb|EGJ00038.1| putative peptide chain release factor H [Shigella boydii 5216-82]
          Length = 204

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQGQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|312964708|ref|ZP_07778959.1| putative peptide chain release factor H [Escherichia coli 2362-75]
 gi|312290729|gb|EFR18607.1| putative peptide chain release factor H [Escherichia coli 2362-75]
          Length = 204

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|293403381|ref|ZP_06647472.1| prfH [Escherichia coli FVEC1412]
 gi|293408390|ref|ZP_06652229.1| peptide chain release factor H [Escherichia coli B354]
 gi|298378993|ref|ZP_06988874.1| prfH [Escherichia coli FVEC1302]
 gi|300898963|ref|ZP_07117256.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
 gi|59889806|emb|CAH19162.1| Probable peptide chain release factor [Escherichia coli]
 gi|284920069|emb|CBG33127.1| putative peptide chain release factor [Escherichia coli 042]
 gi|291429234|gb|EFF02254.1| prfH [Escherichia coli FVEC1412]
 gi|291471568|gb|EFF14051.1| peptide chain release factor H [Escherichia coli B354]
 gi|298280106|gb|EFI21610.1| prfH [Escherichia coli FVEC1302]
 gi|300357405|gb|EFJ73275.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
          Length = 204

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAITVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|331645440|ref|ZP_08346544.1| putative peptide chain release factor H [Escherichia coli M605]
 gi|331045602|gb|EGI17728.1| putative peptide chain release factor H [Escherichia coli M605]
          Length = 232

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 6/208 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
                L++ +  G  E        L    + A ++      LE   G     ++SA + +
Sbjct: 27  KRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISL 86

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NA+   +   G  + +  SPY  +  R   F  I  +     + + +        +T
Sbjct: 87  DGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIHYET 141

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +  
Sbjct: 142 LRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENS 201

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPY 320
             + +       +I  G   R++    +
Sbjct: 202 AALKSQRRMFHHQIERGNPRRTFTGMAF 229


>gi|325278153|ref|ZP_08143661.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096712|gb|EGB95050.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 141

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/140 (45%), Positives = 94/140 (67%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D   + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELEGLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLV 191
           IKG  A+GWL+ E GVHRLV
Sbjct: 122 IKGEYAFGWLRTEIGVHRLV 141


>gi|260596640|ref|YP_003209211.1| putative peptide chain release factor [Cronobacter turicensis
           z3032]
 gi|260215817|emb|CBA28276.1| Putative peptide chain release factor homolog [Cronobacter
           turicensis z3032]
          Length = 240

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 6/212 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLI 172
                L++ +  G  E     +  L    + A +       +E   G  AG  +SA + +
Sbjct: 34  KRMILLQLSSAQGPDECCLAVSKALEALRKEAAQADVALSVIEEEPGPRAGTLRSALVSL 93

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NA    +   G  + +  SPY     R   F    V+  V D     + +SD R D 
Sbjct: 94  EGENAQPLAQRWCGTLQWICESPYRPRHARKNWFIGAAVFTPVGD-----MPQSDIRFDA 148

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQHVN TDSA+R TH+ +G+ V+ Q ERSQH NK  A  ++  KL E    + 
Sbjct: 149 LRASGPGGQHVNKTDSAIRATHVASGISVKVQSERSQHANKRLATLLIAHKLEEQRDAQS 208

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                       +I  G   R +  + +  VK
Sbjct: 209 AGQKAQRRWFHHQIARGNPTRCFTGKGFTPVK 240


>gi|225076746|ref|ZP_03719945.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
 gi|224951914|gb|EEG33123.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
          Length = 212

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 2/201 (0%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L      A+ +    E +     ++ GI SATL ++G  
Sbjct: 8   IYLQISTAQGPAECRIFARFVLGKLLAEAQVKGIDAELVTET-ADKHGILSATLKLEGQK 66

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                +  QG  + +  SP      R   +  ++  P +    E+  SE+     T R+ 
Sbjct: 67  TESLAQTWQGTLQWICPSPIRPKHPRKNWYIGVFRLPDMPQRYEM-PSENGIEFQTCRSG 125

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    +    A
Sbjct: 126 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGNFA 185

Query: 297 NIGESSKTEIGWGRQIRSYVL 317
               +   ++  G   R++V 
Sbjct: 186 QEQHAQLYQVERGNPKRTFVG 206


>gi|170684096|ref|YP_001742396.1| peptide chain release factor-like protein [Escherichia coli
           SMS-3-5]
 gi|170521814|gb|ACB19992.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
          Length = 204

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAITVLETEAGRYPDTMRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|293418352|ref|ZP_06660787.1| peptide chain release factor H [Escherichia coli B088]
 gi|291324880|gb|EFE64295.1| peptide chain release factor H [Escherichia coli B088]
 gi|323945388|gb|EGB41442.1| RF-1 domain-containing protein [Escherichia coli H120]
 gi|324115579|gb|EGC09518.1| RF-1 domain-containing protein [Escherichia coli E1167]
          Length = 204

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|207724424|ref|YP_002254821.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
 gi|206589645|emb|CAQ36606.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
          Length = 207

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R + +   + E +E  DGE AG  +SA + ++G 
Sbjct: 2   ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGEHAGTLRSALVSLEGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        ++      S+ R +T RA
Sbjct: 62  AEADIAQRWEGTIQWTCPSPYRPRHARKNWFFGVARCAAPAVTL-----PSEIRFETTRA 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  +L   E       
Sbjct: 117 SGPGGQHVNKTESAVRAVHVATGISVKVQTERSQHANKRLAVLLLAHRLASHEETMNAAQ 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                +   ++  G   R +  + +
Sbjct: 177 RAQRRTLHHQVERGNPRRVFKGERF 201


>gi|300934927|ref|ZP_07149981.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
 gi|300459833|gb|EFK23326.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
          Length = 204

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|300697304|ref|YP_003747965.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074028|emb|CBJ53565.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
          Length = 210

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R + +   + E +E  DGE AG  +SA + ++G 
Sbjct: 5   ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGECAGTLRSALVSLEGD 64

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        ++      S+ R +T RA
Sbjct: 65  AEADVAQRWEGTIQWTCPSPYRPRHARKNWFFGVARCAAPAVTL-----PSEIRFETTRA 119

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  +L   E       
Sbjct: 120 SGPGGQHVNKTESAVRAIHVATGISVKVQTERSQHANKRLAVLLLAHRLANHEEAMNAAQ 179

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                +   ++  G   R +  + +
Sbjct: 180 RAQRRTLHHQVERGNPRRVFKGERF 204


>gi|331675918|ref|ZP_08376635.1| putative peptide chain release factor H [Escherichia coli H591]
 gi|331076478|gb|EGI47755.1| putative peptide chain release factor H [Escherichia coli H591]
          Length = 232

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 6/208 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
                L++ +  G  E        L    + A ++      LE   G     ++SA + +
Sbjct: 27  KRMILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSL 86

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T
Sbjct: 87  DGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYET 141

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +  
Sbjct: 142 LRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENS 201

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPY 320
             + +       +I  G   R++    +
Sbjct: 202 AVLKSQRRMFHHQIERGNPRRTFTGMAF 229


>gi|256020250|ref|ZP_05434115.1| peptide chain release factor-like protein [Shigella sp. D9]
 gi|332281412|ref|ZP_08393825.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
 gi|323181570|gb|EFZ66990.1| putative peptide chain release factor H [Escherichia coli 1357]
 gi|332103764|gb|EGJ07110.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
          Length = 204

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +   +            R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTANEQE-----QSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|167948499|ref|ZP_02535573.1| hypothetical protein Epers_18991 [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589280|gb|ABG77149.1| hypothetical protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 153

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 64/112 (57%), Positives = 82/112 (73%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  +   +F  + SGE D ++A+L++ AG+GGTE+QDWA MLLRMY RW E   FKTE +
Sbjct: 3   EQRIAELEFRRMFSGEMDPSNAFLDIQAGSGGTEAQDWAEMLLRMYLRWGEAHGFKTELM 62

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           E   GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSFS
Sbjct: 63  EASPGEVAGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFS 114


>gi|330910076|gb|EGH38586.1| hypothetical protein ECAA86_00359 [Escherichia coli AA86]
          Length = 204

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|157156041|ref|YP_001461424.1| peptide chain release factor-like protein [Escherichia coli
           E24377A]
 gi|187732116|ref|YP_001879031.1| peptide chain release factor-like protein [Shigella boydii CDC
           3083-94]
 gi|300817246|ref|ZP_07097464.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|300823448|ref|ZP_07103578.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|307313497|ref|ZP_07593118.1| peptide chain release factor H [Escherichia coli W]
 gi|309797856|ref|ZP_07692238.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|331666568|ref|ZP_08367442.1| putative peptide chain release factor H [Escherichia coli TA271]
 gi|157078071|gb|ABV17779.1| putative peptide chain release factor H [Escherichia coli E24377A]
 gi|187429108|gb|ACD08382.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC
           3083-94]
 gi|300524066|gb|EFK45135.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|300530222|gb|EFK51284.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|306906665|gb|EFN37176.1| peptide chain release factor H [Escherichia coli W]
 gi|308118540|gb|EFO55802.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|320176701|gb|EFW51738.1| peptide chain release factor-like protein [Shigella dysenteriae CDC
           74-1112]
 gi|320185048|gb|EFW59829.1| peptide chain release factor-like protein [Shigella flexneri CDC
           796-83]
 gi|323379877|gb|ADX52145.1| peptide chain release factor H [Escherichia coli KO11]
 gi|331065792|gb|EGI37676.1| putative peptide chain release factor H [Escherichia coli TA271]
          Length = 204

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|156101992|ref|XP_001616689.1| peptide chain release factor 1 [Plasmodium vivax SaI-1]
 gi|148805563|gb|EDL46962.1| peptide chain release factor 1, putative [Plasmodium vivax]
          Length = 263

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 9/223 (4%)

Query: 114 SNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE-ALEIHDGEEAGIKS-ATL 170
           + +   +E   G GG E+  W+  LL  Y  +AE+   + E   +  +       S   +
Sbjct: 20  NKNCIRIEFRPGVGGEEALLWSRELLNTYKTFAERMNCRVERVHDAGESLVVTSPSDVCI 79

Query: 171 LIKGPNA----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             +G       Y   K E G+H++ R+   +S  + H+S ++I V+   D+  + E++  
Sbjct: 80  AKQGQEIKASLYDLFKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHTDEHRKDEVNLK 139

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RI T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER+Q  NK  A   L  K+  
Sbjct: 140 DLRIKTFRSSKPGGQNVNKIESGVSILHKPTGMQTECQEERTQEMNKKIALKRLTEKISH 199

Query: 287 LELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           L  ++  E++         +    R+IR+Y       + D  T
Sbjct: 200 LRHKQSEEQLRRERSKLVKDSSRSRRIRTYNFF-RGYITDHVT 241


>gi|70951470|ref|XP_744973.1| peptide chain release factor 1 [Plasmodium chabaudi chabaudi]
 gi|56525140|emb|CAH78733.1| peptide chain release factor 1, putative [Plasmodium chabaudi
           chabaudi]
          Length = 260

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 10/243 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE--AGIKSATL 170
           + N   +E   G GG E++ W+N L + Y  +AEK+K   ++++               +
Sbjct: 20  NKNHIRIEFRPGIGGDEAELWSNELKKTYQNYAEKKKCSVKSVKDITNSIIIKSPTDVQI 79

Query: 171 LIKGPNA----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              G       Y   K E G H++ RI   +S  + H+S ++I ++ + DD+ + EI+  
Sbjct: 80  NKDGEEIQISLYDLFKNESGTHQVKRIPKNESKDKIHSSTATIAIF-IQDDADKYEINSK 138

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I T+R+S  GGQ+VN  +S VRI HIPTG+  + Q+ER+Q  NK  A   L  K+++
Sbjct: 139 DLKIMTFRSSKPGGQNVNKIESGVRIVHIPTGIQTESQEERTQELNKRIAMKKLTQKIHD 198

Query: 287 LE-LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           L   +K EE+ N       +     +IR+Y       + D      K        G L+ 
Sbjct: 199 LRSREKEEELQNERSKLVKKCHRSSRIRTYNFFT-GYITDH-VKHRKYDLMYFEKGKLEH 256

Query: 346 FMK 348
              
Sbjct: 257 LFN 259


>gi|323976247|gb|EGB71340.1| RF-1 domain-containing protein [Escherichia coli TW10509]
          Length = 204

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TSDEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL +   +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|324114895|gb|EGC08861.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
          Length = 204

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL +   +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|157159718|ref|YP_001457036.1| peptide chain release factor-like protein [Escherichia coli HS]
 gi|191165713|ref|ZP_03027552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300921975|ref|ZP_07138121.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|301325442|ref|ZP_07218928.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|157065398|gb|ABV04653.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|190904220|gb|EDV63930.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300421645|gb|EFK04956.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|300847740|gb|EFK75500.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|320201148|gb|EFW75731.1| peptide chain release factor-like protein [Escherichia coli
           EC4100B]
 gi|323169568|gb|EFZ55240.1| putative peptide chain release factor H [Shigella sonnei 53G]
 gi|324019875|gb|EGB89094.1| putative peptide chain release factor H [Escherichia coli MS 117-3]
          Length = 204

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|193063214|ref|ZP_03044305.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194427638|ref|ZP_03060186.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|260842481|ref|YP_003220259.1| putative peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
 gi|192931122|gb|EDV83725.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194414408|gb|EDX30682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|257757628|dbj|BAI29125.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
          Length = 204

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGAIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|209917447|ref|YP_002291531.1| peptide chain release factor-like protein [Escherichia coli SE11]
 gi|209910706|dbj|BAG75780.1| peptide chain release factor [Escherichia coli SE11]
          Length = 202

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 6/204 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
            L++ +  G  E        L    + A ++      LE   G     ++SA + + G N
Sbjct: 1   MLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGDN 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+S
Sbjct: 61  AWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRSS 115

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    + 
Sbjct: 116 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 175

Query: 297 NIGESSKTEIGWGRQIRSYVLQPY 320
           +       +I  G   R++    +
Sbjct: 176 SQRRMFHHQIERGNPRRTFTGMAF 199


>gi|323965216|gb|EGB60674.1| RF-1 domain-containing protein [Escherichia coli M863]
 gi|327254578|gb|EGE66194.1| putative peptide chain release factor H [Escherichia coli STEC_7v]
          Length = 204

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL +   +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGIRVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R++    +
Sbjct: 177 KSQRRMFHHQIERGNPRRTFTGMAF 201


>gi|300775389|ref|ZP_07085251.1| probable peptide chain release factor H [Chryseobacterium gleum
           ATCC 35910]
 gi|300506129|gb|EFK37265.1| probable peptide chain release factor H [Chryseobacterium gleum
           ATCC 35910]
          Length = 232

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 6/213 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPN 176
            +++ +G G  E Q  A  +L+ +   A++     E +   +G+E   +KS T+L+KG  
Sbjct: 4   IIQITSGRGPLECQWVAAKVLKTFLEEAKQNTIDYEIIHRENGDENLTLKSVTILLKGKE 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              +LK   G       S +    +R   F  I+    +++   I+ +E D R  T R+ 
Sbjct: 64  INLFLKNWLGTVCWTGKSTFRKLHKRSNWFIGIF---ELENVKMIDFNEKDIRFQTARSQ 120

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+GGQ+VN  ++AVR THIPT   V  Q  RSQ +NK ++   L+ K+  + +Q+ E   
Sbjct: 121 GSGGQNVNKVNTAVRATHIPTNETVFVQDSRSQLENKKRSVIRLKEKVMAVYIQQLERKM 180

Query: 297 NIGESSKTEIGWGRQIRSYVLQPY-QMVKDLRT 328
               S + ++  G  +R++    + +  KD RT
Sbjct: 181 KDTWSLQMQVERGNPVRTFSGTDFKKNYKD-RT 212


>gi|256045467|ref|ZP_05448354.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 141

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 3/128 (2%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY
Sbjct: 2   EDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLY 60

Query: 286 ELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           ++E QK E   +    S+   G    +IR+Y   P   V D R N+       V++G+LD
Sbjct: 61  DMERQKAESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELD 119

Query: 345 DFMKATLA 352
           + + A ++
Sbjct: 120 ELVDALIS 127


>gi|218196675|gb|EEC79102.1| hypothetical protein OsI_19734 [Oryza sativa Indica Group]
 gi|222631381|gb|EEE63513.1| hypothetical protein OsJ_18329 [Oryza sativa Japonica Group]
          Length = 214

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+ WA K+  K   +E        + +A + I+    +G L GE+G HR++  S  ++ 
Sbjct: 1   MYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAG 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           +   TS     +   +D  + + + E+D  I    +      H N   SA+R+ HI TGV
Sbjct: 61  TYEATSARVDIIPLFLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGV 117

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
             +   ERS   NK +A + L+AKL  +  + R       +    E  + R+ R Y   P
Sbjct: 118 TAESSGERSYFANKMKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGP 177

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++V DL T ++ +  + VLDGD+D F++  +  +
Sbjct: 178 QKLVHDLNTGLQLSELNSVLDGDIDPFIRGRIVSR 212


>gi|154270254|ref|XP_001535983.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410054|gb|EDN05442.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 223

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 21/191 (10%)

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEIS 224
              + E GVHR+ R+   ++  R HTS  S+ + P     I              +  I 
Sbjct: 2   RRFETEAGVHRVQRVPTTENKGRTHTSAVSVVILPSYPSIIGEGDSELNFDDPNSDYYID 61

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             +  ++  RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++
Sbjct: 62  PQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARI 121

Query: 285 YELELQKREEI----ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
            +   + REE              ++G G +IR+Y         D R+ +   +   +++
Sbjct: 122 AQQRREAREEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIME 180

Query: 341 G--DLDDFMKA 349
           G   L+  M +
Sbjct: 181 GGDGLEKIMDS 191


>gi|261345238|ref|ZP_05972882.1| putative peptide chain release factor H [Providencia rustigianii
           DSM 4541]
 gi|282566935|gb|EFB72470.1| putative peptide chain release factor H [Providencia rustigianii
           DSM 4541]
          Length = 203

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 6/206 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L+  +  G  E           + + A     + + LE     + G+KS  + ++G  +
Sbjct: 3   LLQFSSAQGPDECCIAVEKAFSCFLKEAALLDVQIDVLESFPS-KQGLKSVLVSLEGKQS 61

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
              +    G  +    SP     +R   F S+  +  +    E EI       +  ++ G
Sbjct: 62  EQLVNVWSGTVQWQCQSPLRPRHKRKNWFISVIAFSPIQPLEESEI-----EYEFTKSQG 116

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  ++  KL E + Q+R ++  
Sbjct: 117 AGGQHVNKTCSAVRAKHVSTGISVKVQSERSQHANKRLAKELIHWKLSEFQSQQRTDLDK 176

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMV 323
               S  +I  G    ++V   ++ V
Sbjct: 177 QRHHSHYQIERGNASITFVGNEFKRV 202


>gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 270

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 22/234 (9%)

Query: 127 GTESQDWANMLLRMYTRWAEK-RKFKTEALEIHDGEEAGIKS-----------------A 168
           G E+  +A  L  MY  ++   R ++ E  E   G                         
Sbjct: 4   GEEASLFAAELAEMYREYSTGVRNWRIEEAENGAGGGGAAGGGGGDASALSAPALASTGV 63

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
                G + Y  L+ E GVH++ R+   D + +  TS + + + PV+ D + + + E+DC
Sbjct: 64  KFKAIGDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVL-DPVSVNVHENDC 122

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +I+  R SG GGQ + ++ +AV +THIP+G+ V+C Q RS   NK  A  ++  +L    
Sbjct: 123 KIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQLLAQR 182

Query: 289 LQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           ++ +    +    ++   G    ++R+Y   P   V D R   +    +  ++G
Sbjct: 183 VKDQNSSFHEAWRNQWSSGERSDKMRTYNF-PQNRVTDHRLGKD-FPLNTFMEG 234


>gi|331671827|ref|ZP_08372623.1| putative peptide chain release factor H [Escherichia coli TA280]
 gi|331070816|gb|EGI42175.1| putative peptide chain release factor H [Escherichia coli TA280]
          Length = 232

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 6/208 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
                L++ +  G  E        L    + A ++      LE   G     ++SA + +
Sbjct: 27  KRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISL 86

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G +A+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T
Sbjct: 87  DGDSAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYET 141

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +  
Sbjct: 142 LRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENS 201

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPY 320
             + +       +I  G   R +    +
Sbjct: 202 AALKSQRRMFHHQIERGNPRRIFTGMAF 229


>gi|60682199|ref|YP_212343.1| peptide chain release factor-like protein [Bacteroides fragilis
           NCTC 9343]
 gi|60493633|emb|CAH08422.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
          Length = 206

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    R A+KRK + E LE   G     + S  + ++G  
Sbjct: 5   YLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVALEGAG 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                   +G    +  SPY  + RR   F  +  + +   S   E +E D R +T RAS
Sbjct: 65  CDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLL---SESCEATEDDIRYETLRAS 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++    A
Sbjct: 122 GPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQAMIQA 181

Query: 297 NIGESSKTEIGWGRQI 312
               S+   +  G  +
Sbjct: 182 QTNWSNHNSLQRGNPV 197


>gi|224538378|ref|ZP_03678917.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520007|gb|EEF89112.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 205

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 8/199 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
            Y+++ +G G  E      ++L    + A  +  KTE +E   G     + SA + ++G 
Sbjct: 4   VYMQITSGRGPAECCRVVALVLEKILKQAVAKGVKTEIVERETGPLNRTLLSAVISLQGG 63

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRIDTY 233
           + +  ++  +G  + +  SPY    +R   F  +  +      ++ E EI     R +T 
Sbjct: 64  DYHALIEDWEGSVQWIAQSPYRIYHKRKNWFVGVQTFTLSESQEATEAEI-----RYETL 118

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG GGQHVN T+SAVR  HIPTG+ V    +RSQ +NK  A   L  KL    +++  
Sbjct: 119 RASGPGGQHVNKTESAVRAVHIPTGMSVVASDQRSQWQNKKLATERLLLKLASWSIEQAM 178

Query: 294 EIANIGESSKTEIGWGRQI 312
             A    S+   +  G  +
Sbjct: 179 IQAQANWSNHNCLQRGNPV 197


>gi|325498389|gb|EGC96248.1| prfH [Escherichia fergusonii ECD227]
          Length = 204

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
            +       +I  G   R +    +
Sbjct: 177 KSQRRMFHHQIERGNPRRIFTGMAF 201


>gi|17548920|ref|NP_522260.1| peptide chain release factor-like protein [Ralstonia solanacearum
           GMI1000]
 gi|17431170|emb|CAD17850.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum GMI1000]
          Length = 207

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R +     + E LE  DGE  G  +SA + ++G 
Sbjct: 2   ILLQFSSAQGPAECELAVLKGLACLQRESALAGVRVEVLEQEDGEHPGTLRSALVSLEGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        ++      S+ R +T RA
Sbjct: 62  AEAAVAQRWEGTIQWTCPSPYRPRHARKNWFFGVARCAAPAATL-----PSEIRFETARA 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  KL   +       
Sbjct: 117 SGPGGQHVNKTESAVRAIHLATGISVKVQTERSQHANKRLAVLLLAHKLASHDAAASAAQ 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                +   ++  G   R +  + +
Sbjct: 177 RAHRRTLHHQVARGNPRRVFKGERF 201


>gi|82538743|ref|XP_723804.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23478225|gb|EAA15369.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 358

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 71/315 (22%), Positives = 137/315 (43%), Gaps = 28/315 (8%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE---------DDCSILQETSDN 91
           + + + ++ +     +   K++   L +N+ L     EE         +D S ++E   N
Sbjct: 27  KIQNMSKQLKIAWEELDIYKQL---LTENMKLTLRKDEESKKIDTINFNDYSEVKEIIYN 83

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           L+ I   +  +  +   +           +  G GG E++ +AN L  MY  + + + ++
Sbjct: 84  LENICDSIVKQLLDIYTN----------FIVPGVGGQEAKMFANELFSMYEHFCKLKNYE 133

Query: 152 TEALE--IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
                  + +  +   K+    IKG   Y     E G+HR+ RI       +  TS   +
Sbjct: 134 CLIKNNKLIEEGKGIYKNIVADIKGEGVYIDFIQEIGIHRVQRIPINSKKMQTSTSIVLL 193

Query: 210 WVYPVVDDSIE--IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           +      + +E  ++I +++  I+T R+ GAGGQ VN  ++ V+I H PT + V+ Q+  
Sbjct: 194 FDEKQTKEKLEKKMKIPKNEFLIETKRSGGAGGQSVNKNETCVKIIHKPTNIFVEVQKTS 253

Query: 268 SQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           SQ +NK+ A  M++ KLY    ++ +       ++ K       +IR+Y    +  V D 
Sbjct: 254 SQIQNKSIAMEMIKNKLYNFYYEQEKINFLKDKKNQKQNGDRSEKIRTYNFS-HNTVIDH 312

Query: 327 RTNIEKTSPSDVLDG 341
             N++ T       G
Sbjct: 313 IANVQYTGIDQFFKG 327


>gi|53714002|ref|YP_099994.1| peptide chain release factor-like protein [Bacteroides fragilis
           YCH46]
 gi|253567006|ref|ZP_04844457.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764352|ref|ZP_06092920.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52216867|dbj|BAD49460.1| putative peptide chain release factor [Bacteroides fragilis YCH46]
 gi|251944130|gb|EES84639.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263256960|gb|EEZ28306.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301163677|emb|CBW23231.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 206

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    R A+KRK + E LE   G     + S  + ++G  
Sbjct: 5   YLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVALEGAG 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                   +G    +  SPY  + RR   F  +  + +   S   E +E D R +T RAS
Sbjct: 65  CDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLL---SESREATEDDIRYETLRAS 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++    A
Sbjct: 122 GPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQAMIQA 181

Query: 297 NIGESSKTEIGWGRQI 312
               S+   +  G  +
Sbjct: 182 QTNWSNHNSLQRGNPV 197


>gi|332829815|gb|EGK02457.1| peptide chain release factor H [Dysgonomonas gadei ATCC BAA-286]
          Length = 207

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 4/197 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
            YL++ +G G  E      + +      A+K     E +E   GE    + SA + I+G 
Sbjct: 6   IYLQITSGRGPAECGRVVALTVEKILTQAKKIGLDVEVVEREPGEINRTLFSAVISIEGL 65

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A   ++  +G  + +  SPY    +R   F  +  + + D   +  + E +    T RA
Sbjct: 66  KADEIVREWEGTIQWIAQSPYRIYHKRKNWFVGVRSFTIPD---KHNVDEREISYQTLRA 122

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR THI +G+ V    +RSQ +NK  A   L  KL    +++  + 
Sbjct: 123 SGPGGQHVNKTESAVRATHISSGLSVTASDQRSQLQNKKLAVERLLIKLAAWNMEQNMQK 182

Query: 296 ANIGESSKTEIGWGRQI 312
           A    ++   +  G  +
Sbjct: 183 AQENWNNHNTLQRGNPV 199


>gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
          Length = 427

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 47/240 (19%)

Query: 108 LSGEADSN-----DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           L+   D       DA LE+ AG GG ++  ++                            
Sbjct: 184 LTDPEDDELALQGDAVLEIQAGVGGEDAALFSR--------------------------- 216

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-I 221
                       P+A+ +L  E G+HR+ R+ P ++  R  TS +++ V P   +  + I
Sbjct: 217 ------------PDAFRFLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPRSSNLEDKI 264

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++S    +ID  RASG GGQ VN +++AVRITH PTGV V C + +SQ +NK  A  +LR
Sbjct: 265 DLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQTENKNLALELLR 324

Query: 282 AKLYELELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           A+L +  ++K  E       ++        +IR+Y  Q   +V D R  +      D LD
Sbjct: 325 AQLLQQMMRKASEERGRAIDAQKGSKDRSEKIRTYNFQ-RDVVTDHRCRMHVNGVEDFLD 383


>gi|281414235|ref|ZP_06245977.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
          Length = 129

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 1/120 (0%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SG   Q V    SAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L   + E+
Sbjct: 1   SSGPASQSVGAPHSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAE-ED 59

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 +   +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +  +
Sbjct: 60  AKKKEMAGDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 119


>gi|90019981|ref|YP_525808.1| putative peptide chain release factor [Saccharophagus degradans
           2-40]
 gi|89949581|gb|ABD79596.1| Class I peptide chain release factor [Saccharophagus degradans
           2-40]
          Length = 248

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 15/220 (6%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE----------AGIKS 167
           +L++ AG G  E       LL++    A+ R    E +E    ++              S
Sbjct: 29  WLQLTAGQGPKECGWVVAQLLKVMLVQAQARGIDVEVVESLAFDKMLRNQHIVMPDAYLS 88

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             L I+G  A  +     G H+    S Y    +R   F  +     V   +E  I+   
Sbjct: 89  VLLRIEGEQAQLFANEWCGTHKWQGESIYRPKHKRINWFVGVERITPVK-PVETSINYQQ 147

Query: 228 CR----IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            +     ++ ++SGAGGQHVNTT+SAVR TH P+G+ V+   +RSQH+NK  A   +   
Sbjct: 148 LQRQLVFESMKSSGAGGQHVNTTNSAVRATHTPSGITVRVDTDRSQHRNKRLALERIAML 207

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           L   E +   +  N       ++  G  +++++ Q ++ +
Sbjct: 208 LLSAEKEGANKQVNERWLQHYQVKRGSPVKTFIGQEFKEI 247


>gi|255009670|ref|ZP_05281796.1| peptide chain release factor-like protein [Bacteroides fragilis
           3_1_12]
 gi|313147455|ref|ZP_07809648.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
 gi|313136222|gb|EFR53582.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 207

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 8/198 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176
           YL++ +G G  E      ++L    + A+ RK K E +E   G     + SA + ++G  
Sbjct: 6   YLQITSGRGPVECCRVVALVLERILKQAQTRKLKVEIVEKEAGPANRTLLSAVIALEGAG 65

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRIDTYR 234
               ++  +G    +  SPY  + RR   F  +  ++     ++ E EI     R +T R
Sbjct: 66  CDTLVEEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESREATENEI-----RYETLR 120

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++   
Sbjct: 121 ASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNVEQAMI 180

Query: 295 IANIGESSKTEIGWGRQI 312
            A    S+   +  G  +
Sbjct: 181 QAQANWSNHNSLQRGNPV 198


>gi|300693607|ref|YP_003749580.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
 gi|299075644|emb|CBJ34941.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
          Length = 207

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 6/207 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R + +   + E +E  DGE  G  +SA + ++G 
Sbjct: 2   ILLQFSSAQGPVECELAVVKALAYLQRESAQAGVRVEVIEQEDGERPGTLRSALVSLEGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        ++      S+ R +T R+
Sbjct: 62  AEAAAAQRWEGTIQWTSPSPYRPRHARKNWFFGVARCATPAVTL-----PSEIRFETTRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  KL   +       
Sbjct: 117 SGPGGQHVNKTESAVRAIHMATGISVKVQTERSQHANKRLAVLLLAHKLASHDEAMNAAQ 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQM 322
                +   ++  G   R +  + +++
Sbjct: 177 RAQRRTLHRQVERGNPRRVFKGERFEL 203


>gi|312891971|ref|ZP_07751474.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
 gi|311295602|gb|EFQ72768.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
          Length = 205

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 4/198 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIKGPN 176
            +++ +G G  E       + R+  + A++     + LE  + + +G   SAT++ +G  
Sbjct: 5   MIQITSGKGPAECCRVVACVQRLMLKQAKQFGVDIQVLENREADLSGTFLSATMMAQGMQ 64

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              + +  +G  R +  SPY    +R   F  +  + +      ++ +  D +++T R+S
Sbjct: 65  LEVFRREWEGTIRWIAQSPYRRYHQRKNWFVGVAFFDIKQ---LMQWNPKDVKLETTRSS 121

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN  ++AVR TH+P+G+ V     RSQ +NK      L AK+   + ++  E  
Sbjct: 122 GPGGQHVNKVETAVRGTHLPSGIQVMAMDSRSQLENKKLCLARLEAKIMVWQTEQLMEQQ 181

Query: 297 NIGESSKTEIGWGRQIRS 314
           +        +  G  +++
Sbjct: 182 HSQWLQHHALERGNPVKT 199


>gi|253689801|ref|YP_003018991.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756379|gb|ACT14455.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 207

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L+   + A ++  + E +E  +G+ +G  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALIQDAARQGIECEIIETEEGKRSGTLRSALVLLNGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                     G  +    SP+     R   F  +  +       + EI     R +  ++
Sbjct: 62  RTEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVARFHQEQAFADNEI-----RFEATKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLKALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                    +I  G  ++ +  + + +V 
Sbjct: 177 RAQRRLFHHQIERGNPVKVFKGEDFTLVT 205


>gi|303240867|ref|ZP_07327379.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2]
 gi|302591595|gb|EFL61331.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2]
          Length = 204

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 6/205 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ +G G  E +   ++ L+ Y    + +   T  ++   G  +G   + LL     A
Sbjct: 2   WIQISSGKGPDECELAVSLFLKSYQNECKNKGIITNVIDAIPGNISGNLKSVLLSLECQA 61

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
              L    G    +  SPY  N +R   F ++        + ++  SE D   ++ R+SG
Sbjct: 62  QEEL---NGTVLWICKSPYRPNHKRKNWFINVEA---FQSTEKLNFSEKDVSFESMRSSG 115

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ+VN  +SAVR  H+PTG+ V   +ERSQ+ NK  A   L   +  +  +       
Sbjct: 116 PGGQNVNKVESAVRAIHLPTGLTVTASEERSQYMNKKLALGRLSNLIKAINNEDSASHKK 175

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQM 322
                  ++  G  IR Y    +++
Sbjct: 176 TMWMQHNDLERGNPIRIYEGLNFKL 200


>gi|270659693|ref|ZP_06222357.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
 gi|270316971|gb|EFA28651.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
          Length = 170

 Score =  128 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 10/156 (6%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYL 119
             + +  ILL      DD  + +     ++  K E+E      Q   L     D  + YL
Sbjct: 2   QNIEEAEILL------DDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYL 55

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG
Sbjct: 56  EIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYG 115

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
            LK E G HR+ R+   +S  R HTS  ++ V P  
Sbjct: 116 QLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPEF 151


>gi|253572326|ref|ZP_04849729.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838101|gb|EES66189.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 206

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 8/202 (3%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
               YL++ +G G  E      ++L    R A+    K E +E   G     + SAT+ +
Sbjct: 2   KEKVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIAL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRI 230
           +G  +       +G  + +  SPY    +R   F  +  +V     ++ E +      R 
Sbjct: 62  QGAASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQEATERDF-----RY 116

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    ++
Sbjct: 117 ETLRASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTME 176

Query: 291 KREEIANIGESSKTEIGWGRQI 312
           +    A    S+   +  G  +
Sbjct: 177 QAMIQAQENWSNHNHLQRGNPV 198


>gi|298386489|ref|ZP_06996045.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
 gi|298260866|gb|EFI03734.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
          Length = 206

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 8/202 (3%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
               YL++ +G G  E      ++L    R A+    K E +E   G     + SAT+ +
Sbjct: 2   KEKVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIAL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRI 230
           +G  +       +G  + +  SPY    +R   F  +  +V     ++ E +      R 
Sbjct: 62  QGTASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQEATERDF-----RY 116

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    ++
Sbjct: 117 ETLRASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTME 176

Query: 291 KREEIANIGESSKTEIGWGRQI 312
           +    A    S+   +  G  +
Sbjct: 177 QAMIQAQENWSNHNHLQRGNPV 198


>gi|238022850|ref|ZP_04603276.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
 gi|237865658|gb|EEP66796.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
          Length = 206

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 5/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++  G    E Q +A  +LR   R AE      E L      + GI SA   + G  
Sbjct: 2   IYLQLSTGQSPAECQIFAQFVLRKILREAEAAGVAAELLS-QTASKHGILSAVFALSGAG 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  + +  SP      R   +  ++  P +    +    +   R +T RA 
Sbjct: 61  AEDLAQRWLGTLQWIGNSPVRPKHPRKNWYIGVFRLPQIPALPD----DDSIRFETCRAG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR TH+ TGV V+ + ERSQH NK +A  +L  KL E       + +
Sbjct: 117 GKGGQHVNKTDSAVRATHLATGVSVRVESERSQHANKKRARELLALKLAEQHSAALGQHS 176

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
               S   ++  G  +R +    ++
Sbjct: 177 AHAHSQLYQVERGNPVRVFKGANFR 201


>gi|319935093|ref|ZP_08009534.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1]
 gi|319809988|gb|EFW06365.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1]
          Length = 195

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 15/208 (7%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTR-WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            +++++G G  E +    ML +   + ++       E +  +  ++  +KS T  I    
Sbjct: 2   LIQINSGQGPKECEYACYMLYQELLKEYS-----SLEVVSRYVSDQKCLKSITFSIHEDL 56

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           +Y      +G  + +  SP+  + +R   F  I +         +E    D + +T+R+S
Sbjct: 57  SY-----LEGTVQWICQSPFRPHHKRRNWFVDISIIKEELKIENVE----DIKFETFRSS 107

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN   +A+R  HIPTG+ V    +RSQ +NK  A+  L  K+ ++     + I 
Sbjct: 108 GKGGQNVNKVSTAIRAIHIPTGISVVAMDQRSQLQNKKIAYLRLMEKINQVNSSHHKRID 167

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            +  +   +I  G  IR Y    ++ +K
Sbjct: 168 YLNWNKHNQIVRGNPIRVYSGMKFKRIK 195


>gi|294894730|ref|XP_002774927.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239880702|gb|EER06743.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 272

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 21/249 (8%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D  +E+  G GG E+  W   +  M  R+A    +    +++ +             
Sbjct: 17  DASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKVMEQGVKRTPE----- 71

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV--YPVVDDSIEIEISESDCR- 229
                +G+LK E G+HR+ R+  + ++S   TS  S+ V      + ++   +   + + 
Sbjct: 72  --KGIFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLKPHEYKV 129

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
             T ++SG GGQ VN    AVRI HI +GV       R+   NKA A   +  K+  +E 
Sbjct: 130 WITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQKI--MEE 187

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR---TNIEKTSPSDVLDGD- 342
           + ++     G   K  +G G    +IRSY      +V D R   +     +  +++DG+ 
Sbjct: 188 KGKKIAKERGIIRKQHMGSGDRSEKIRSYNYLNGTVV-DHRLPKSEDGPNALEEIMDGEG 246

Query: 343 -LDDFMKAT 350
            L D ++  
Sbjct: 247 LLHDIIEPL 255


>gi|167553099|ref|ZP_02346849.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205322360|gb|EDZ10199.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 204

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKTLDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|218682457|ref|ZP_03530058.1| peptide chain release factor-like protein [Rhizobium etli CIAT 894]
          Length = 186

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/181 (33%), Positives = 89/181 (49%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LL +  R A       E       +  G KSA + + G  A G      G  R    SP 
Sbjct: 6   LLDIIEREAVGLGCSFEKSLGPMPDRHGAKSAVVSLDGLEAEGIASSYCGTIRFTFKSPA 65

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
               +R   + ++       +  ++ I  +D R +T RA G GGQH NTTDSAVRI H P
Sbjct: 66  RPGHKRQNWYVAVQRIDAGTEGGKVTIDPADLRFETLRAGGPGGQHQNTTDSAVRILHRP 125

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG++V+ + ERSQH+NKA A   L A L  +E++K+E   +    +   I  G +++S+ 
Sbjct: 126 TGLMVRARDERSQHRNKALALRRLEAMLRHIEVEKQEAAKSGRFVANRTIERGNEVKSFK 185

Query: 317 L 317
           L
Sbjct: 186 L 186


>gi|254472541|ref|ZP_05085940.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
 gi|211958005|gb|EEA93206.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
          Length = 212

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 1/207 (0%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L + +G G  E +      +    + A+K      +        A + SA + + G  
Sbjct: 7   VRLLLSSGDGPAECRLALCHSVAAMEKTAKKLGLSFASDPERSDLSANVASAEVTLAGEG 66

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A  + K   G  +    SP+  N +R   F  ++    V  +   E +  D R +T RA 
Sbjct: 67  AKTFAKAWCGTIKWTCQSPFRPNHKRQNWFIGVY-ELPVSAAEAGEFNAEDLRFETLRAG 125

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQH N T+SAVR+TH+PTG+ V  + ERSQH+NK  A   L+ KL  L  ++   + 
Sbjct: 126 GPGGQHQNKTESAVRVTHVPTGLSVVARDERSQHRNKQIALQRLQEKLSGLSAEEGARLR 185

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMV 323
                   ++  G  +R +  + ++ V
Sbjct: 186 KSERLLHHQLERGNPVRCFKGERFKEV 212


>gi|323355075|gb|EGA86905.1| Mrf1p [Saccharomyces cerevisiae VL3]
          Length = 201

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/188 (34%), Positives = 91/188 (48%), Gaps = 12/188 (6%)

Query: 81  DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D S+  E       +  + E        + L         + LE+  G GG E+  +   
Sbjct: 5   DPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFTQN 64

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL MY  +A  RK+K   +  ++ E   GI  A L I+   +Y  L+ E GVHR+ RI  
Sbjct: 65  LLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRIPS 124

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEIS-------ESDCRIDTYRASGAGGQHVNTTDS 248
            ++  R HTS +++ V P + D     I          + R+D  RASG GGQHVNTTDS
Sbjct: 125 TETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTTDS 184

Query: 249 AVRITHIP 256
           AVR+THIP
Sbjct: 185 AVRLTHIP 192


>gi|16759310|ref|NP_454927.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16763697|ref|NP_459312.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142917|ref|NP_806259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|62178886|ref|YP_215303.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161615515|ref|YP_001589480.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167993332|ref|ZP_02574427.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168232270|ref|ZP_02657328.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168465389|ref|ZP_02699271.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168819094|ref|ZP_02831094.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194443695|ref|YP_002039557.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194472201|ref|ZP_03078185.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|198241865|ref|YP_002214270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389746|ref|ZP_03216357.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207855800|ref|YP_002242451.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213025683|ref|ZP_03340130.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213161389|ref|ZP_03347099.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213416713|ref|ZP_03349857.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213425142|ref|ZP_03357892.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213649630|ref|ZP_03379683.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213852433|ref|ZP_03381965.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|224582156|ref|YP_002635954.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|289826861|ref|ZP_06545771.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25513287|pir||AI0542 probable peptide chain release factor prfH [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16418816|gb|AAL19271.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501601|emb|CAD08785.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138549|gb|AAO70119.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62126519|gb|AAX64222.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364879|gb|ABX68647.1| hypothetical protein SPAB_03287 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402358|gb|ACF62580.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194458565|gb|EDX47404.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|195631774|gb|EDX50294.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197936381|gb|ACH73714.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602191|gb|EDZ00737.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205328589|gb|EDZ15353.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333479|gb|EDZ20243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205344152|gb|EDZ30916.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|206707603|emb|CAR31885.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224466683|gb|ACN44513.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245540|emb|CBG23335.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992008|gb|ACY86893.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301156930|emb|CBW16412.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911285|dbj|BAJ35259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320084570|emb|CBY94362.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224975|gb|EFX50036.1| Peptide chain release protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713338|gb|EFZ04909.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323128632|gb|ADX16062.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622014|gb|EGE28359.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332987265|gb|AEF06248.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 204

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|239623937|ref|ZP_04666968.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47_FAA]
 gi|239521968|gb|EEQ61834.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47FAA]
          Length = 196

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 12/206 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +G G  E +    +  R   +  E+R  +      H     G  S     +     
Sbjct: 3   VQISSGQGPAECELAVGLFYRQLQK--ERRDMRL-VQSAHGKTGRGYSSIMFETEED--- 56

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             ++  +G    +  SP+    RR   F  + +   + D+ E    +   R +T+ + G 
Sbjct: 57  --MRELEGSVLWICKSPFRPEHRRKNWFIDVSILEQLPDARE----DMKLRFETFCSGGK 110

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN  ++ VRI H+PTG+ V   + RSQH NK  A N L   L ++EL+ R+    +
Sbjct: 111 GGQHVNKVETGVRIIHVPTGISVVSTEARSQHMNKKLAMNRLCDILADMELENRQREKEL 170

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVK 324
                T +  G  +R Y    +   K
Sbjct: 171 AWLEHTRLERGNPVRIYEGMQFIRKK 196


>gi|215485384|ref|YP_002327815.1| peptide chain release factor-like protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|215263456|emb|CAS07777.1| predicted peptide chain release factor [Escherichia coli O127:H6
           str. E2348/69]
          Length = 193

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I  +     + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGR 310
            +       +I  G 
Sbjct: 177 KSQRRMFHHQIERGN 191


>gi|268592903|ref|ZP_06127124.1| putative peptide chain release factor H [Providencia rettgeri DSM
           1131]
 gi|291311693|gb|EFE52146.1| putative peptide chain release factor H [Providencia rettgeri DSM
           1131]
          Length = 203

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E        L  + + A+K     + LE       G+KSA + ++G N
Sbjct: 2   ILLQFSSAQGPEECCIAVEKALACFFQEAKKLSVIADTLEFFPS-RYGLKSALISLEGEN 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  +    S      +R   F S+  +  +       I +S+   +  +A 
Sbjct: 61  AEILSQKWTGTIQWQCQSQIRPRHKRKNWFLSVTRFSPIK-----PIEDSEIEFEFTKAQ 115

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  +++ KL E + Q+  E+ 
Sbjct: 116 GAGGQHVNKTSSAVRAKHVATGITVKVQSERSQHANKKLAKQLIQWKLNEHQSQQLNELD 175

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                S  +I  G  + ++    ++ +K
Sbjct: 176 KQRHHSHYQIERGNAVMTFSGNEFKRLK 203


>gi|56414557|ref|YP_151632.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363487|ref|YP_002143124.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128814|gb|AAV78320.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094964|emb|CAR60501.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 204

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN +DSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKSDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|238913295|ref|ZP_04657132.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
          Length = 204

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYIGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|168240054|ref|ZP_02664986.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194449085|ref|YP_002044299.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197263075|ref|ZP_03163149.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|194407389|gb|ACF67608.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197241330|gb|EDY23950.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205339954|gb|EDZ26718.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 204

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|315652605|ref|ZP_07905584.1| chain release factor B [Eubacterium saburreum DSM 3986]
 gi|315485145|gb|EFU75548.1| chain release factor B [Eubacterium saburreum DSM 3986]
          Length = 199

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 9/207 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L++ AG G  E Q     + +   +         E L   DGEE     + +L    + 
Sbjct: 2   ILQISAGMGPVECQRAVFGICKALMKEIPS----LEILSYVDGEEKETFYSVMLSSDED- 56

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
              L   +G    +  S Y    +R   F  + + P    +++   SE+D  ++ + ASG
Sbjct: 57  ---LSYIEGTMLWICKSRYRPEHKRKNWFVDVSIIPETV-NVDDNFSEADIIVEKFHASG 112

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ+VN  ++ VR+ HIPTG+ +   +ERSQ  NK  A   L   L      + E+  N
Sbjct: 113 PGGQNVNKVETGVRVIHIPTGIRISSTRERSQLMNKKDALRKLAIVLKNKNTSQIEQSKN 172

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVK 324
              S  TEI  G  IR Y  + +++ K
Sbjct: 173 NAWSKHTEIVRGNPIRVYEGEKFRLKK 199


>gi|326201214|ref|ZP_08191086.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782]
 gi|325988782|gb|EGD49606.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782]
          Length = 205

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 4/205 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ +G G  E +   ++ L+ +     K + K   ++   GE +G   + LL    + 
Sbjct: 2   WIQISSGKGPVECELAVSLFLKAFENECNKNQIKINIIDAVPGEISGNYKSVLLSLDCSE 61

Query: 178 YGWLKG-EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           +  +   + G    +  SPY  N +R   F ++ V+ + D   ++   E D R ++ R+S
Sbjct: 62  HQVIDNIKSGTVLWICKSPYRPNHKRKNWFINVDVFQIPD---KLSFCEKDVRFESMRSS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR  H+PTG+    ++ERSQ+ NK  A   L   + E+   K     
Sbjct: 119 GPGGQNVNKVETAVRAIHLPTGLTATAREERSQYMNKKLALCRLSNLIREMNDSKFSVQK 178

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
                    +  G  IR Y  + ++
Sbjct: 179 RNLWEQHNALERGNPIRIYKGKEFK 203


>gi|149369402|ref|ZP_01889254.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
 gi|149356829|gb|EDM45384.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
          Length = 238

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 4/211 (1%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIK 173
           N   +++ AG G  E        L+   +         E +   +G E   I+S TL +K
Sbjct: 9   NTQIIQITAGRGPAECCWVVAQTLKFLIKELTATNITYEIISKENGFENRTIQSVTLQLK 68

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G     +L    G  + V  S +  + +R   F + +    V+++ ++E+  ++      
Sbjct: 69  GKQLDTFLANWLGTIQWVGTSTFRKHHKRKNWFIACF---KVEETNKLELVLNEVSFQAM 125

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQHVN   SA+R TH  +G+ V     RSQH+N+  A   L+ K+        +
Sbjct: 126 RSSGPGGQHVNKVSSAIRATHKKSGLQVVAMDSRSQHQNRKIAIKRLQEKVSNFNRNTLQ 185

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
              +    +  EI  G  +R +    ++  K
Sbjct: 186 NSVDDQWRNHLEIKRGNPVRVFKGTDFKKEK 216


>gi|183600289|ref|ZP_02961782.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
 gi|188020079|gb|EDU58119.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
          Length = 202

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 6/206 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L+  +  G  E        L  +   A+KR+     LE     + G+KSA + ++G  A
Sbjct: 2   LLQFSSAQGPEECCIAVEKALACFFIEAKKREVMVNTLE-TVASKHGLKSALVALEGHGA 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +   G  +    SP     +R   F ++  +  +       I ESD   +  +A G
Sbjct: 61  EELAQLWSGTIQWQCQSPLRPKHKRKNWFINVIRFSPIQ-----TIEESDIEFEFIKAQG 115

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  ++  +L E + Q+   +  
Sbjct: 116 PGGQHVNKTCSAVRAKHLATGISVKVQSERSQHANKKLAKQLIYWRLNEYQDQQASALNK 175

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMV 323
              ++  +I  G     +  Q ++ +
Sbjct: 176 QRHNAHYQIERGNANIIFSGQAFKRI 201


>gi|205351639|ref|YP_002225440.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271420|emb|CAR36228.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326626670|gb|EGE33013.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 204

 Score =  126 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +        +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRLEQQRQNGCAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|227538749|ref|ZP_03968798.1| peptide chain release factor family protein [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241258|gb|EEI91273.1| peptide chain release factor family protein [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 170

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKG 174
           D  + V AG G  E       +++   + A     +   L+  +G   G   SA+L I G
Sbjct: 2   DKIIGVTAGRGPEECSWVVAQVIKKIIQEAATFDVEVRVLDRQEGSINGTVISASLQISG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            N   +     G  + +  S +  + +R   F  ++    +  S      E D      R
Sbjct: 62  ENCMAFAALWTGTIQWIGKSDFRKSHKRKNWFIEVF---EIKQSASWIFDEKDVGYQAMR 118

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +SGAGGQHVN   SAVR THIPTGV V     RSQH+NK  A   L+ KL
Sbjct: 119 SSGAGGQHVNKVSSAVRATHIPTGVSVVSMDSRSQHQNKKIATKRLQKKL 168


>gi|29346864|ref|NP_810367.1| peptide chain release factor-like protein [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29338761|gb|AAO76561.1| putative peptide chain release factor [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 206

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 8/202 (3%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
               YL++ +G G  E      ++L    R A+    K E +E   G     + SAT+ +
Sbjct: 2   KEKVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKMEMIEREVGPVNRTLLSATIAL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRI 230
           +G  +       +G  + +  SPY    +R   F  +  +V     ++ E +      R 
Sbjct: 62  QGAASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQEATERDF-----RY 116

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    ++
Sbjct: 117 ETLRASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTME 176

Query: 291 KREEIANIGESSKTEIGWGRQI 312
           +    A    S+   +  G  +
Sbjct: 177 QAMIQAQENWSNHNHLQRGNPV 198


>gi|213610056|ref|ZP_03369882.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 204

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 6/203 (2%)

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAY 178
           ++ +  G  E        L   T+ A + K     LE   G      +SA + + G  A 
Sbjct: 5   QLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAM 64

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+SG 
Sbjct: 65  AFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRSSGP 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   + + 
Sbjct: 120 GGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAALKSE 179

Query: 299 GESSKTEIGWGRQIRSYVLQPYQ 321
                 +I  G  +R +    + 
Sbjct: 180 RRLFHHQIERGNPLRIFKGMAFT 202


>gi|168261270|ref|ZP_02683243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205349709|gb|EDZ36340.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 204

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAVL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|265991893|ref|ZP_06104450.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263002901|gb|EEZ15252.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 133

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 3/121 (2%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK 
Sbjct: 1   MRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKA 59

Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           E   +    S+   G    +IR+Y   P   V D R N+       V++G+LD+ + A +
Sbjct: 60  ESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALI 118

Query: 352 A 352
           +
Sbjct: 119 S 119


>gi|156086270|ref|XP_001610544.1| peptide chain release factor 1 [Babesia bovis T2Bo]
 gi|154797797|gb|EDO06976.1| peptide chain release factor 1, putative [Babesia bovis]
          Length = 276

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 39/260 (15%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP- 175
             +E+  G GGTE+  WA  L + + ++ + +K   +       EE       L I+G  
Sbjct: 21  VVVEIRPGVGGTEANTWAQELAKAFKKFCQNKKCNVK-------EENIGSIIILHIQGDD 73

Query: 176 ---------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV-----YPVVDDSI-- 219
                            E G+H++ R+   +   R H+S +++ V          + I  
Sbjct: 74  DKFRENGCTGLEERFLREAGIHQVKRVPTSEKAGRMHSSTATVAVLPTELTKAKYEDILA 133

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +I I   D    T R+SGAGGQ+VN  ++A  +TH PTG+ ++ Q+ER+Q KNK  A   
Sbjct: 134 KIVIDPRDIEWKTCRSSGAGGQNVNKVETAAALTHKPTGIRIESQEERTQSKNKEIALEK 193

Query: 280 LRAKL-YELELQKREEIANIGESSKTEIG------------WGRQIRSYVLQPYQMVKDL 326
           L+ +L  ++E   R +  N  +     I                ++++Y    +Q++ D 
Sbjct: 194 LKIQLAKDIESDVRHDAQNRRKEQVKAIEMNYICTQIKGSKRSERLKTYFFNTHQIIND- 252

Query: 327 RTNIEKTSPSDVLDGDLDDF 346
           R   +  + +D L   L+  
Sbjct: 253 RCGCK-YNLNDFLKFKLEKV 271


>gi|126737179|ref|ZP_01752914.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
 gi|126721764|gb|EBA18467.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
          Length = 213

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 3/211 (1%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           S    + V +G+G  E Q     +L +    AE      +        + G KSA +L+ 
Sbjct: 4   SRHISVLVTSGSGPAECQQAVANVLNVMRTEAEL--LAVDFDTNGARSKHGYKSAVVLVS 61

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  A  + K  +G  +    S      +R   F  ++  P    + E  I  SD  +DT+
Sbjct: 62  GAEAEAFAKNWRGTIQWRAQSNLRPKHKRANWFIGVFDLPASVRTPER-IQASDVILDTF 120

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RA G GGQH NTTDSAVR TH PTG+    ++ERSQH+NKA A   L+  +         
Sbjct: 121 RAGGPGGQHQNTTDSAVRATHRPTGLSAVAREERSQHRNKALALERLQHLMAAQAAADEA 180

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                       +  G  +R +    ++ VK
Sbjct: 181 AQKASRNELHYALERGNPVRCFKGHDFREVK 211


>gi|56203457|emb|CAI18896.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 164

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 1/128 (0%)

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           + G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I +
Sbjct: 38  QGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INL 96

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LR
Sbjct: 97  VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLR 156

Query: 282 AKLYELEL 289
           AKLY + L
Sbjct: 157 AKLYSMHL 164


>gi|68076525|ref|XP_680182.1| peptide chain release factor 1 [Plasmodium berghei strain ANKA]
 gi|56501082|emb|CAH94168.1| peptide chain release factor 1, putative [Plasmodium berghei]
          Length = 252

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 10/239 (4%)

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--EAGIKSATL 170
           + N   +E   G GG E++ W+  L ++Y  +A K+K K ++++               +
Sbjct: 12  NKNHIRIEFRPGIGGDEAELWSKELKKIYQSYANKKKLKVKSVKDITNSLIIKSPNDVKI 71

Query: 171 LIKGPNA----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
              G       Y   K E G H++ RI   ++  +  +S ++I ++       + EI+  
Sbjct: 72  NKDGKEIQISLYDLFKNESGTHQVKRIPKNENKEKIQSSTATIAIFIQNY-INKYEINLK 130

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I T+R+S  GGQ+VN  +SAVRI H  TG+  +  +ER+Q  NK  A   L  K+++
Sbjct: 131 DLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESHEERTQELNKKIAMKRLTQKIHD 190

Query: 287 LELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           L+ +++EE + N       +     +IR+Y       + D   N  K        G L+
Sbjct: 191 LQNREKEEFLQNERIKFTKDCNRSNRIRTYNFFT-GYITDH-VNNRKYDLMYFEKGKLE 247


>gi|69249982|ref|ZP_00605073.1| PCRF [Enterococcus faecium DO]
 gi|68194043|gb|EAN08594.1| PCRF [Enterococcus faecium DO]
          Length = 139

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E             + + L +  +++E+  EE D ++ +E  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEA 163
           ++ E L+    +  
Sbjct: 121 YQVETLDYQKSQXG 134


>gi|332885245|gb|EGK05496.1| peptide chain release factor H [Dysgonomonas mossii DSM 22836]
          Length = 206

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 4/200 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172
           +N  YL++ +G G  E      ++L    + A + K + E LE   GE    + SA + +
Sbjct: 2   NNKIYLQITSGRGPAECCRAVALVLEKILKQARELKLEAEVLEREQGEINRTLFSAIISL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G      +   +GV +    SPY    +R   F  +  +   + S   ++        T
Sbjct: 62  EGNKIDEIVNEWEGVIQWTAQSPYRIYHKRKNWFVGVKSFTPSELS---DVDMKYITYQT 118

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SGAGGQHVN T++AVR  H P+G+ V    +RSQH+NK  A   L  KL     ++ 
Sbjct: 119 LRSSGAGGQHVNKTETAVRAIHNPSGLSVIASDQRSQHQNKKLATERLLVKLSAWTEEQM 178

Query: 293 EEIANIGESSKTEIGWGRQI 312
            + A     +   +  G  +
Sbjct: 179 MQEAQKNWDNHNSLERGNPV 198


>gi|197248567|ref|YP_002145297.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|204927397|ref|ZP_03218599.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|197212270|gb|ACH49667.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|204324062|gb|EDZ09257.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 204

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S + ++   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEQMQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|160935130|ref|ZP_02082513.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441861|gb|EDP19558.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
          Length = 198

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 12/208 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +G G  E +    ML     + A         +    G++ G  S+ +     +  
Sbjct: 3   VQISSGQGPAECELAVAMLYEELRKEAGD----VRLVGCTPGKKPGCMSSVVFETDRD-- 56

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L+  +G  + +  SPY    RR   +  + +   V    E    E   R +T+R+ G 
Sbjct: 57  --LRELEGSVQWICKSPYRPGHRRKNWYVDVSILDQVPRISE----ERMVRFETFRSGGK 110

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN  ++ VR  HIPTG  V   Q RSQH NK  A + L + L E+  + +++  ++
Sbjct: 111 GGQHVNKVETGVRAIHIPTGTAVVSTQARSQHMNKQIAMDRLCSILAEMNARNQQKEKSL 170

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDL 326
                  +  G  +R Y    ++  +  
Sbjct: 171 AWMEHARLERGNPVRIYEGMKFERSRKH 198


>gi|146332693|gb|ABQ22852.1| mitochondrial peptide chain release factor 1 precursor-like protein
           [Callithrix jacchus]
          Length = 192

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 12/174 (6%)

Query: 186 GVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           G+HR+ RI     +SR    HT   S+ + P   D +++++   D RIDT+RA GAGGQH
Sbjct: 3   GIHRVQRIPEVGLSSRMQRIHTGTMSVIILPQP-DEVDVKLDPKDLRIDTFRARGAGGQH 61

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ HIPTG+VV+CQQERSQ +NK  A ++LRA+LY  +    +       + 
Sbjct: 62  VNTTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLY--QQIIEKNKCQQHSTR 119

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           K ++G G    +I +Y       V D R   E     + + G   LD  ++  L
Sbjct: 120 KLQVGTGAQSERILTYNF-TQDRVTDHRIAYEVRDIKEFVCGGKALDQLIQRLL 172


>gi|168238579|ref|ZP_02663637.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194735122|ref|YP_002113341.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194710624|gb|ACF89845.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288612|gb|EDY27989.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 204

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S + ++   +   +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEQMQSDEIHFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|167948500|ref|ZP_02535574.1| peptide chain release factor 2 (programmed frameshift) [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 105

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 1/103 (0%)

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH PTG+VVQCQ +RSQHKNK QA   L+AKLYELE+QK+ E     E +K++IGW 
Sbjct: 1   MRITHNPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELEIQKQRETQQAVEDTKSDIGWD 60

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRTN+E  +   VLDG LD F++A+L 
Sbjct: 61  SQIRSYVL-DASRIKDLRTNVETGNTQAVLDGGLDIFIEASLK 102


>gi|322614608|gb|EFY11537.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620127|gb|EFY16999.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623421|gb|EFY20260.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629281|gb|EFY26060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632001|gb|EFY28755.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637261|gb|EFY33963.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642458|gb|EFY39060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646289|gb|EFY42803.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652443|gb|EFY48797.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653395|gb|EFY49728.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660457|gb|EFY56693.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664609|gb|EFY60802.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669338|gb|EFY65488.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670884|gb|EFY67017.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678877|gb|EFY74932.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681906|gb|EFY77931.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322688032|gb|EFY83998.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194387|gb|EFZ79582.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197802|gb|EFZ82934.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203402|gb|EFZ88427.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323206853|gb|EFZ91806.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210378|gb|EFZ95270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214620|gb|EFZ99371.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323223176|gb|EGA07519.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224853|gb|EGA09116.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230057|gb|EGA14177.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233795|gb|EGA17884.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238511|gb|EGA22569.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244199|gb|EGA28208.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246359|gb|EGA30342.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251985|gb|EGA35848.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257982|gb|EGA41661.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323259921|gb|EGA43552.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265065|gb|EGA48564.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272628|gb|EGA56035.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 204

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L    + A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLAKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S + ++   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEQMQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L +    +   +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRLEQQRQNECAAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
            +       +I  G  +R +    + 
Sbjct: 177 KSERRLFHHQIERGNPLRIFKGMAFT 202


>gi|325114215|emb|CBZ49772.1| putative peptide chain release factor 1 [Neospora caninum
           Liverpool]
          Length = 489

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 66/308 (21%)

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRM 140
           +LQ+  +  Q     VE    +  L  E ++ +A    +E+   AGG E+Q WA  L  M
Sbjct: 165 LLQQEREEAQDRLRAVEEAIEKVALMPEEENKNANVAIVEIRPAAGGEEAQLWATDLAEM 224

Query: 141 YTRWAEKRK-FKT-----------------------------------------EALEIH 158
           YTR+ E +K ++                                          E     
Sbjct: 225 YTRFFELQKTWRFAQLQLAGPNAGSKSPALQRRDDAAPARRKSRAGSSRPTSKEEERNAV 284

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            G   G+      ++GP  Y  L  E GVHR+ R+   ++ +     F  +         
Sbjct: 285 SGALGGVTCIAFRVEGPGVYRQLLKESGVHRVQRVPRTETQN-----FQGVA-------- 331

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
               + E+D  I T R+SG GGQ+VN  ++AV + H PTG+ + CQQER+Q  NK  A  
Sbjct: 332 ----LDEADLVIRTARSSGCGGQNVNKVETAVDLLHAPTGIRIFCQQERTQAANKKAAKE 387

Query: 279 MLRAKL-YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR--TNIEKTSP 335
           +L  KL    E +  +++               ++R+Y  +    V + R        + 
Sbjct: 388 ILLKKLAARHEEEVVQQMREERREQVCSGLRSERVRTYNFRD-GRVNEHRLTGGEGLFAL 446

Query: 336 SDVLDGDL 343
             +L+G L
Sbjct: 447 KPILEGQL 454


>gi|290475750|ref|YP_003468639.1| putative peptide chain release factor [Xenorhabdus bovienii
           SS-2004]
 gi|289175072|emb|CBJ81875.1| putative peptide chain release factor (modular protein)
           [Xenorhabdus bovienii SS-2004]
          Length = 205

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 6/206 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L      A++       LE   G  +   +S  + I+G 
Sbjct: 2   ILLQISAAQGPDECALAVRKALERLIDEADELGIMVNILEKESGRRSRTLRSVMVAIQGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           N   + +   G  + +  SP+     R   F  +  +  +      +I ES+ R +T RA
Sbjct: 62  NEQQFFERWDGTIKWICASPWRKGDGRKNWFIGVAQFKPLQ-----QIMESEIRFETLRA 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SA+R  HI +G+ V+ Q ERSQH N+  A  +L  +L + +   + ++
Sbjct: 117 SGPGGQHVNKTESAIRAVHIASGISVKVQSERSQHANRRLACLLLEHRLQQQQDMHQAQL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQ 321
                    +I  G  +R++    + 
Sbjct: 177 KAERRLFHNQIERGNPVRTFAGMQFS 202


>gi|213420646|ref|ZP_03353712.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 112

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/112 (50%), Positives = 73/112 (65%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MTQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I 
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKIS 112


>gi|302781616|ref|XP_002972582.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
 gi|300160049|gb|EFJ26668.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
          Length = 163

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 13/142 (9%)

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS +S+ + P V++ ++++I   + +IDTYRA GA GQHVNTT SAVR+TH+PTG+VV 
Sbjct: 3   HTSTASVAILPEVNE-VDVDIRNDEIKIDTYRAGGADGQHVNTTCSAVRVTHVPTGIVVA 61

Query: 263 CQQERSQHK------NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IR 313
            Q ERS+HK      NKA+A ++L A+LYELE  +    A+  E  + +IG   +   IR
Sbjct: 62  IQDERSRHKEGPSARNKAKALSILYARLYELERSR--AAASRSELQQDQIGSSDRSESIR 119

Query: 314 SYVLQPYQMVKDLRTNIEKTSP 335
           +Y   P   V D R  + + S 
Sbjct: 120 TYNF-PQDRVTDHRVGVTQHSI 140


>gi|330467788|ref|YP_004405531.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
 gi|328810759|gb|AEB44931.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
          Length = 202

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 3/198 (1%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGP 175
             L + AG G  E       LLR     A +++ +   ++   G+  G  +S  + + G 
Sbjct: 3   VRLLLSAGRGPQECAWALAHLLRRLEAEAARQRLRVHRVDTVAGDRPGTYRSVLVEVGGA 62

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
               +     G       SPY +   R   + +    P   D+   E  ESD  +   R 
Sbjct: 63  GVEAFAASWTGTLCWQAPSPYRAGVGRKNWYVTAQPCPADPDATCFE--ESDVEVVACRT 120

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQH N   +AVR TH PTG+VV    ER    N+  A  +LR +L   +     + 
Sbjct: 121 GGPGGQHRNKVSTAVRATHRPTGLVVVVDTERQFSLNRRIALRLLRQRLANRDETAVRDA 180

Query: 296 ANIGESSKTEIGWGRQIR 313
                     +  G  +R
Sbjct: 181 TTARWQLHDRLVRGDPVR 198


>gi|70729456|ref|YP_259194.1| peptide chain release factor-like protein [Pseudomonas fluorescens
           Pf-5]
 gi|68343755|gb|AAY91361.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf-5]
          Length = 206

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 6/205 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPN 176
            L++ +  G  E +      LR     AE +  +   +E    +     +S  + + G +
Sbjct: 4   LLQLSSAQGPAECELAVTHALRRLHHEAEAQNVRLGIIEQVASQARDAHRSVLVSLDGEH 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G    +  SP     RR   + +   +  ++++   EI     R +  RAS
Sbjct: 64  AANLARRWTGTLLWICKSPLRPAHRRKNWYFAGQPFCALEEAEGGEI-----RFEAMRAS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK  A  +++ +L + + Q  +E+ 
Sbjct: 119 GPGGQHVNKTDSAVRATHVATGISVKVQSERSQHDNKRLARLLIQQRLADRQEQSVQELR 178

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
                +   +  G  +R++    + 
Sbjct: 179 LQRRDAHHRVERGNAVRTFSGSAFT 203


>gi|212710167|ref|ZP_03318295.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM
           30120]
 gi|212687166|gb|EEB46694.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM
           30120]
          Length = 203

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E           + + A   K  TE LE     + G+KS  + + G +
Sbjct: 2   ILLQFSSAQGPEECCIAVENAFACFVKEAALLKVNTELLESCPS-KQGLKSVLIALDGIH 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  +    SP     +R   F S+ ++  +      EI       +  ++ 
Sbjct: 61  AEKMAERWSGTIQWQCQSPLRPRHKRKNWFISVMMFTPIQPLENSEI-----EYEFTQSQ 115

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  ++  KL E + Q+   + 
Sbjct: 116 GAGGQHVNKTCSAVRAKHVATGISVKVQSERSQHANKKLAKELIHWKLCEYQSQQLNTLD 175

Query: 297 NIGESSKTEIGWGR 310
                S  +I  G 
Sbjct: 176 KQRHLSHYQIERGN 189


>gi|163803524|ref|ZP_02197393.1| protein chain release factor B [Vibrio sp. AND4]
 gi|159172659|gb|EDP57512.1| protein chain release factor B [Vibrio sp. AND4]
          Length = 103

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG Q
Sbjct: 1   MTHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 60

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 61  IRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLK 100


>gi|149197057|ref|ZP_01874109.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
 gi|149139603|gb|EDM28004.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
          Length = 203

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 4/202 (1%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKG 174
           +A+++  +G G  E +     + +++ R AE    + E ++   G E+   +S  + ++G
Sbjct: 2   NAWIQFSSGQGPRECERVLWHIFKIFCREAEDENIQCELIKAEKGSEKNSFRSLLISLEG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
                  K  +G       SP+  + +R   F     + +   +   E+  S  + +  R
Sbjct: 62  NQLETLRKNWEGSLLWRAPSPFRPHHKRRNWFVQASFFAIPAKA---ELDLSQIKFEAQR 118

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
            SG GGQHVN   +A+R  + P  + + C +ERSQ++NK  A   +   L     QK  E
Sbjct: 119 GSGPGGQHVNKCATAIRAYYAPLQLSILCNEERSQYRNKMLAMARVLEALNLHHSQKEGE 178

Query: 295 IANIGESSKTEIGWGRQIRSYV 316
            +        ++  G   R++ 
Sbjct: 179 ESKAQRQKHYQLERGNPCRTFK 200


>gi|115372342|ref|ZP_01459651.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|310819555|ref|YP_003951913.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370555|gb|EAU69481.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|309392627|gb|ADO70086.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 939

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 46/337 (13%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R + L ++T+ P+LW +   A   +R  + ++  I+ ++ ++  +     L+  A  
Sbjct: 636 LEERRNQLLSETQAPNLWDDPARAAATLRAFRTVEAQINELERMEQAVTFARRLVREAKN 695

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD-WAN 135
           E     +Q TS   Q  ++  E +  E+L +  A +ND  A +++   +   E+QD W  
Sbjct: 696 E-----VQLTSAAKQVEEVAREVQMSEALHASGATANDVEALVDICV-SDSVEAQDAWIQ 749

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L  MY  WA+KR ++     +   E        + I GP AYG+L GE G+HR +    
Sbjct: 750 ELATMYLGWAQKRGYEA----MLVAEAESPARVVVRIAGPGAYGFLAGEAGLHRRIE--- 802

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
                +R  ++  +     +D   ++E+S     +  +   GA  + V T  +   +   
Sbjct: 803 ---EEKRQRAYVRVHRGGALDAPEDLELSVEGRPVKQH--EGAFLERVRTEVT---VKDS 854

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
            TG V+         + K  A  ++                        +     + R Y
Sbjct: 855 ATGRVLTLMGSGELDELKGIATRVV----------------------SGQATSTDEARRY 892

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            L     V+D RT        DVL GD+D F+ A ++
Sbjct: 893 YLGRGARVEDPRTGAGTPRVKDVLRGDMDLFIAAWIS 929


>gi|160897900|ref|YP_001563482.1| peptide chain release factor H [Delftia acidovorans SPH-1]
 gi|160363484|gb|ABX35097.1| peptide chain release factor H [Delftia acidovorans SPH-1]
          Length = 199

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 83/202 (41%), Gaps = 9/202 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN- 176
            +++ A  G  E +    + LR   R         + LE      AG KS  L  +G   
Sbjct: 3   LIQLTASHGPAECEHAVRLTLRELLRDCAASGIAVDVLEETPTP-AGYKSVLLRCEGDTG 61

Query: 177 -AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYR 234
             +G L    G  + V  SP   +  R   F ++           + EI    C+     
Sbjct: 62  LLHGTLGAWLGTIQWVFDSPLRPHHPRRNWFVAVQKCEPPRQLPADGEIVFQACK----- 116

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASG GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL  L  Q   +
Sbjct: 117 ASGKGGQHVNTTDSAVHALHVPSGISVKVMSERSQHANKRLARELLALKLARLNAQGEGQ 176

Query: 295 IANIGESSKTEIGWGRQIRSYV 316
                     E+  G  ++ + 
Sbjct: 177 ARRTRSQQHWEVERGSPVKVFR 198


>gi|218297204|ref|ZP_03497866.1| PCRF domain protein [Thermus aquaticus Y51MC23]
 gi|218242481|gb|EED09020.1| PCRF domain protein [Thermus aquaticus Y51MC23]
          Length = 148

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 4/147 (2%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           + +E   L   +   + ++  L   + L E    E+  ++  E  +  +++    E    
Sbjct: 1   MSQEAARLRRTVETFRSLEGDLEGLMELWEELPAEEREALKPELLEAAKKL----EVLYH 56

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E+LL+      +A L +  GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAG
Sbjct: 57  ETLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFEVEVVDLRPGAEAG 116

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLV 191
           +  A +L+KG NAYG L  E GVHR  
Sbjct: 117 VDYAQILVKGENAYGLLSAEAGVHRPG 143


>gi|218670324|ref|ZP_03519995.1| peptide chain release factor-like protein [Rhizobium etli GR56]
          Length = 175

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/157 (35%), Positives = 83/157 (52%)

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           +  G KSA + + G +A     G  G  R    SP     +R   + ++       +  +
Sbjct: 19  DRHGAKSAIVNLDGLHADRIAGGYCGKIRFTFESPVRPGHKRQNWYVAVQRIQAGPEGGQ 78

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I+ +D R  T RA G GGQH NTTDSAVR+ H PTG+VV  + ERSQH+NKA A   L
Sbjct: 79  VTINPADQRFQTLRAGGPGGQHQNTTDSAVRVLHRPTGLVVTARDERSQHRNKALALRRL 138

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            A L ++E +K+E   +    +   I  G +++++ L
Sbjct: 139 EAMLRQVEAEKQEAAKSGRFIANRTIERGNEVKAFKL 175


>gi|225023353|ref|ZP_03712545.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC
           23834]
 gi|224943831|gb|EEG25040.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC
           23834]
          Length = 204

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 5/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E Q +A   L+   R AE    + E LE     + GI SA L + G  
Sbjct: 2   IYLQISTAQGPAECQMFARFALQKILREAEAAGVEAEILEQTPS-KHGILSAVLKLSGSR 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A     G QG  + V  SP      R   +  ++  P +    E E         T RA 
Sbjct: 61  AESLATGWQGTLQWVCPSPLRPQHPRKNWYIGVFRLPEIPALPESE----GIEFQTCRAG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR  H+ +G+ V+ + ERSQH NK +A  +L  KL E       + A
Sbjct: 117 GKGGQHVNKTESAVRAVHLASGIAVRAEGERSQHANKKRALGLLALKLAEHHQTALRQHA 176

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQ 321
                S  ++  G   R +  + ++
Sbjct: 177 ADAHKSLYQVERGNPRRVFKGEGFR 201


>gi|225390312|ref|ZP_03760036.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
 gi|225043636|gb|EEG53882.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
          Length = 196

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 15/205 (7%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D  +++ +G G  E +    +  +   R  E    + + +    G   G  S  L     
Sbjct: 3   DMRIQISSGQGPEECELAVGLFYQALRREVE----EIQMVSCVKGRRGGFSSVVLEAD-- 56

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                  G +G    V  SP     +R   +  + +   +  +      E   R +T+R+
Sbjct: 57  -----WSGLEGSVLWVCKSPLRPGHKRKNWYIDVSILEEIPRTS----KEMQVRFETFRS 107

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++ VR+ HIPTG+ V   + RSQH NK  A N L   L + +LQ     
Sbjct: 108 GGKGGQNVNKVETGVRVVHIPTGIAVVSTEARSQHMNKQIALNRLCDILADRDLQCARRE 167

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
             +       +  G  +R Y  + +
Sbjct: 168 KELAWMEHNRLERGNPVRIYEGREF 192


>gi|296775661|gb|ADH42938.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 214

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 7/189 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++R   L  +     +           +E   L N +   KE  D   +   L  +  
Sbjct: 9   KVIERYISLEKELSTGKV--EPKLLAKKSKEYSDLKNILPSAKEYVDFEKNKKDLNNIIE 66

Query: 78  EE-DDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++ +D  ++      L+      +   +  +   L   + D  +  +E+ AG GG E+  
Sbjct: 67  DKKNDKEMISLAEKELKDAIENKEKNEKKLKIFLLPKDKDDEKNTIVEIRAGTGGLEATL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L RMY +   K+ +K E + I   E  G K     + G N Y +LK E GVHR+ R
Sbjct: 127 FVADLFRMYEKVCSKKGWKIEIISISKSEAKGFKEVIFSVIGENIYSYLKYESGVHRVQR 186

Query: 193 ISPYDSNSR 201
           +   ++  R
Sbjct: 187 VPTTEAQGR 195


>gi|104779685|ref|YP_606183.1| peptide chain release factor-like protein [Pseudomonas entomophila
           L48]
 gi|95108672|emb|CAK13366.1| putative peptide chain release factor [Pseudomonas entomophila L48]
          Length = 206

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 79/205 (38%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L      A+ +      LE   G   G  +S  L + G 
Sbjct: 2   ILLQLSAAQGPDECALAVAKALLRLQAEADAQAVAVRILEEEPGPRRGTLRSVLLALDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SPY     R   F     +      +  EI     R     +
Sbjct: 62  QAERLADHWTGSLQWTCSSPYRPGHARKNWFFGGARFAPPAPELASEIHFETLR-----S 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +GV V+ Q ERSQH NK  A  ++  +L +   Q   E+
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGVSVKVQSERSQHANKRLALLLIGQRLAQQAEQVDSEL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                     I  G   R +  + +
Sbjct: 177 RAERRLFHHRIERGNPRRVFRGERF 201


>gi|323938779|gb|EGB35025.1| RF-1 domain-containing protein [Escherichia coli E1520]
          Length = 185

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 6/175 (3%)

Query: 147 KRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++      LE   G     ++SA + + G NA+   +   G  + +  SPY  +  R   
Sbjct: 13  RQDVAVTVLETETGRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNW 72

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F  I  +     + + +      R +T R+SG GGQHVN TDSAVR TH+ TG+ V+ Q 
Sbjct: 73  FLGIGRF-----TADEQEQSDAVRYETLRSSGPGGQHVNKTDSAVRATHLATGISVKVQS 127

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ERSQH NK  A  ++  +L + + +    + +       +I  G   R++    +
Sbjct: 128 ERSQHANKRLARLLIAWRLEQQQQENSAALKSQRRMIHHQIERGNPRRTFTGMAF 182


>gi|78066331|ref|YP_369100.1| peptide chain release factor-like protein [Burkholderia sp. 383]
 gi|77967076|gb|ABB08456.1| Class I peptide chain release factor [Burkholderia sp. 383]
          Length = 204

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPN 176
            +++ +  G  E Q  A   LR     A+ ++     L+   GE  G  +SA L + G  
Sbjct: 2   LMQISSAHGPLECQLAAANALRRLQAEADAQRVVVTVLDAEPGERPGTLRSALLDLDGAG 61

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A        G  + +  SPY     R   F  +             + + D R +  RA 
Sbjct: 62  AQALADRWTGTLQWICASPYRLRHPRKNWFIGVTRCADAQ-----PLPDGDVRFEAMRAR 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T SA+R TH+ TG+ V+ + ERSQH NK  A  +L+ +L +   +   +  
Sbjct: 117 GPGGQHVNKTSSAIRATHVATGLSVRVESERSQHANKRLALQLLQVRLQQEADRHASDAR 176

Query: 297 NIGESSKTEIGWGRQIRSYVLQPY 320
                    +  G  +R +    +
Sbjct: 177 RQRRMQHFALERGNPVRVFHGAAF 200


>gi|300947294|ref|ZP_07161497.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|300955685|ref|ZP_07168035.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|301643547|ref|ZP_07243589.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
 gi|260450569|gb|ACX40991.1| peptide chain release factor H [Escherichia coli DH1]
 gi|300317436|gb|EFJ67220.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|300453095|gb|EFK16715.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|301078047|gb|EFK92853.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
          Length = 178

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 6/175 (3%)

Query: 147 KRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++      LE   G     ++SA + + G NA+   +   G  + +  SPY  +  R   
Sbjct: 6   RQDVAVTVLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNW 65

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F  I  +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q 
Sbjct: 66  FLGIGRF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQS 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ERSQH NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 121 ERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 175


>gi|300929514|ref|ZP_07144981.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|300462556|gb|EFK26049.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|323972417|gb|EGB67624.1| RF-1 domain-containing protein [Escherichia coli TA007]
          Length = 178

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 6/175 (3%)

Query: 147 KRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++      LE   G     ++SA + + G NA+   +   G  + +  SPY  +  R   
Sbjct: 6   RQDVAVTVLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNW 65

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F  I  +     + E E S++  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q 
Sbjct: 66  FLGIGRFT----ADEKEQSDA-IRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQS 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ERSQH NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 121 ERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 175


>gi|323943355|gb|EGB39508.1| RF-1 domain-containing protein [Escherichia coli E482]
          Length = 185

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 6/175 (3%)

Query: 147 KRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++      LE   G     ++SA + + G NA+   +   G  + +  SPY  +  R   
Sbjct: 13  RQDVAVTVLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNW 72

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F  I  +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q 
Sbjct: 73  FLGIGRF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQS 127

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ERSQH NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 128 ERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 182


>gi|213419806|ref|ZP_03352872.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 133

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 2/119 (1%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR+
Sbjct: 1   RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQ 60

Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       +    G    + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 61  QAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 118


>gi|323963546|gb|EGB59104.1| RF-1 domain-containing protein [Escherichia coli H489]
          Length = 185

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 6/175 (3%)

Query: 147 KRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++      LE   G     ++SA + + G NA+   +   G  + +  SPY  +  R   
Sbjct: 13  RQDVAVTVLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNW 72

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F  I  +     + E E S++  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q 
Sbjct: 73  FLGIGRFT----ADEKEQSDA-IRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQS 127

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ERSQH NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 128 ERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 182


>gi|207109871|ref|ZP_03244033.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 130

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 74/118 (62%), Positives = 92/118 (77%)

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVR
Sbjct: 1   WASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVR 60

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           ISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN   + +
Sbjct: 61  ISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKQKAVI 118


>gi|213583753|ref|ZP_03365579.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 166

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 7/161 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG GG E+ 
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
            +A  L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166


>gi|15799941|ref|NP_285953.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           EDL933]
 gi|15829517|ref|NP_308290.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. Sakai]
 gi|82775830|ref|YP_402177.1| peptide chain release factor-like protein [Shigella dysenteriae
           Sd197]
 gi|168750219|ref|ZP_02775241.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|168757264|ref|ZP_02782271.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|168763477|ref|ZP_02788484.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|168770034|ref|ZP_02795041.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|168776124|ref|ZP_02801131.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|168782997|ref|ZP_02808004.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|168789709|ref|ZP_02814716.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|168800326|ref|ZP_02825333.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|195938639|ref|ZP_03084021.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208806453|ref|ZP_03248790.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208812358|ref|ZP_03253687.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208821267|ref|ZP_03261587.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209398288|ref|YP_002268863.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|217325768|ref|ZP_03441852.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254791396|ref|YP_003076233.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261223709|ref|ZP_05937990.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261255882|ref|ZP_05948415.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281080|ref|YP_003497898.1| putative peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|309786024|ref|ZP_07680653.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|12513007|gb|AAG54561.1|AE005201_14 probable peptide chain release factor [Escherichia coli O157:H7
           str. EDL933]
 gi|13359720|dbj|BAB33686.1| probable peptide chain release factor [Escherichia coli O157:H7
           str. Sakai]
 gi|81239978|gb|ABB60688.1| probable peptide chain release factor [Shigella dysenteriae Sd197]
 gi|187768441|gb|EDU32285.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|188015585|gb|EDU53707.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|188999642|gb|EDU68628.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|189355734|gb|EDU74153.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|189361064|gb|EDU79483.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|189366361|gb|EDU84777.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|189370775|gb|EDU89191.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|189377360|gb|EDU95776.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|208726254|gb|EDZ75855.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208733635|gb|EDZ82322.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208741390|gb|EDZ89072.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209159688|gb|ACI37121.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|209745314|gb|ACI70964.1| probable peptide chain release factor [Escherichia coli]
 gi|209745316|gb|ACI70965.1| probable peptide chain release factor [Escherichia coli]
 gi|209745318|gb|ACI70966.1| probable peptide chain release factor [Escherichia coli]
 gi|209745320|gb|ACI70967.1| probable peptide chain release factor [Escherichia coli]
 gi|209745322|gb|ACI70968.1| probable peptide chain release factor [Escherichia coli]
 gi|217321989|gb|EEC30413.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254590796|gb|ACT70157.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|290760953|gb|ADD54914.1| Probable peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|308926135|gb|EFP71613.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|320190210|gb|EFW64860.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320638171|gb|EFX07920.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. G5101]
 gi|320643253|gb|EFX12452.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. 493-89]
 gi|320648900|gb|EFX17518.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. H 2687]
 gi|320660248|gb|EFX27758.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320665014|gb|EFX32124.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. LSU-61]
 gi|326338757|gb|EGD62576.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1044]
 gi|326342456|gb|EGD66236.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1125]
          Length = 166

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + + +SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRPSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|163754646|ref|ZP_02161768.1| putative peptide chain release factor [Kordia algicida OT-1]
 gi|161325587|gb|EDP96914.1| putative peptide chain release factor [Kordia algicida OT-1]
          Length = 198

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 7/199 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ +G+G  E       L    +R      +    +E+   +    KS  L   G +A
Sbjct: 6   WVQISSGSGPEECCLAVKYLTEKLSR---LPNYTFNVIELVATKYQNYKSVWLRATGDSA 62

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
                  QG  + +  SPY ++ +R   F  + VY +     +I  S  + ++ T R+SG
Sbjct: 63  EFK-NHWQGSIQFIFRSPYRAHHQRKNWFVDVKVYVMPT---QISWSPKEIQVKTARSSG 118

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN  ++AV + HIPTG+ VQ  +ERSQ  NK  A+  L   +     +++  I  
Sbjct: 119 AGGQHVNKVETAVSMIHIPTGITVQASEERSQFLNKKLAFARLDIAIKAQNQKQQNAIEK 178

Query: 298 IGESSKTEIGWGRQIRSYV 316
                  ++  G  ++ + 
Sbjct: 179 QKWMQHKQLQLGNPVQVFK 197


>gi|218703550|ref|YP_002411069.1| peptide chain release factor-like protein [Escherichia coli UMN026]
 gi|218430647|emb|CAR11515.1| putative peptide chain release factor [Escherichia coli UMN026]
          Length = 166

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|89093039|ref|ZP_01165990.1| peptide chain release factor 2 [Oceanospirillum sp. MED92]
 gi|89082689|gb|EAR61910.1| peptide chain release factor 2 [Oceanospirillum sp. MED92]
          Length = 207

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 9/205 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGP 175
             L++ AG G  E      + L+   + A+ +    + +     E+  G KS  L     
Sbjct: 2   ILLQLSAGQGPDECAYAVGLALKQLDKDAKAQAVSIKLISGTPSEKRGGYKSLLLQCDAD 61

Query: 176 N---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +   A  + +  QGV   +  SP+    +R   F S  VY + +++ + EI+   CR   
Sbjct: 62  SPQRAKQFAETWQGVLLWICQSPFRPKHKRKNWFFSGQVYEIAEETNDGEITYQTCR--- 118

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
             ASGAGGQHVNTTDSAVR TH+ +G+ V+ + ERSQH NK  A  ++  KL E   +++
Sbjct: 119 --ASGAGGQHVNTTDSAVRATHVSSGISVRVESERSQHANKRLAKLLILQKLAEQVREEQ 176

Query: 293 EEIANIGESSKTEIGWGRQIRSYVL 317
             +         E+  G   R +  
Sbjct: 177 SRLDKAHWLQHQELERGNPARVFKG 201


>gi|331001770|ref|ZP_08325292.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412744|gb|EGG92127.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 200

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 9/205 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L++ AG G  E Q     + R   +         E L    G E     + +L    + 
Sbjct: 2   ILQLSAGMGPVECQRAVFGICRELMKEIPS----PEILNYVAGAEDETFLSVMLYSKQDV 57

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
                  +G    +  S Y    +R   F  + + P   + +E   SE+D RI+ + A+G
Sbjct: 58  ----SYLEGSMLWICKSKYRPWHKRKNWFIDVSIIPETTE-MEENFSENDLRIEKFHANG 112

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ+VN  ++ VR+ HIP+G+ V   +ERSQ  NK  A   L   L      ++ +  N
Sbjct: 113 PGGQNVNKVETGVRVIHIPSGIRVSSTRERSQLLNKKDAIRKLAIVLKSRNDFEKVKSRN 172

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQM 322
              S  +EI  G  +R Y  + +++
Sbjct: 173 NAWSKHSEIVRGNPVRIYEGENFRL 197


>gi|161486311|ref|NP_752319.2| peptide chain release factor-like protein [Escherichia coli CFT073]
 gi|162138491|ref|YP_539310.2| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|218557192|ref|YP_002390105.1| peptide chain release factor-like protein [Escherichia coli S88]
 gi|218688128|ref|YP_002396340.1| peptide chain release factor-like protein [Escherichia coli ED1a]
 gi|218363961|emb|CAR01626.1| putative peptide chain release factor [Escherichia coli S88]
 gi|218425692|emb|CAR06484.1| putative peptide chain release factor [Escherichia coli ED1a]
          Length = 166

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|323158080|gb|EFZ44179.1| putative peptide chain release factor H [Escherichia coli EPECa14]
          Length = 166

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGHYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + ++      +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAVLKSLRRMFHHQIERGNPRRTFTGMAF 163


>gi|162138281|ref|YP_668200.2| peptide chain release factor-like protein [Escherichia coli 536]
          Length = 166

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|222100136|ref|YP_002534704.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572526|gb|ACM23338.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 160

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 2/136 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + +   + L  L  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 14  ELEKKFKDVLSIVNEEEVNRELKELEKKLSDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL+  E+D  ++ +  + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 74  VRSLFEDLEVAIELS--EEDMDMVNQVEEIVQDLEKAVKKLELEIILNGKYDPNNAYLSV 131

Query: 122 HAGAGGTESQDWANML 137
           H GAGGTESQDWA ML
Sbjct: 132 HPGAGGTESQDWAQML 147


>gi|331651168|ref|ZP_08352193.1| putative peptide chain release factor H [Escherichia coli M718]
 gi|331050909|gb|EGI22961.1| putative peptide chain release factor H [Escherichia coli M718]
          Length = 166

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETQRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|124511698|ref|XP_001348982.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
 gi|23498750|emb|CAD50820.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
          Length = 352

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 2/132 (1%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +  I++SD  I T R+ G GGQ+VN  ++AVRI H PT + V+   ER+Q  NK  A   
Sbjct: 218 DFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKR 277

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +  KL  L+  +  +      ++K+   +G QIR+YVL   +M+KD RTN+  T    VL
Sbjct: 278 IYEKLLYLQ-TEALKNKKYELANKSLTHFGEQIRNYVLYGNKMIKDTRTNVFSTDIDKVL 336

Query: 340 -DGDLDDFMKAT 350
             G++D F+ A 
Sbjct: 337 YQGEIDIFIDAY 348



 Score = 76.2 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 5/117 (4%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA----EKRKFKTEALEIHDGEEAGIKS 167
              N   L + +G GGTE+ D+ NML  MY ++      ++  K E ++I   E  GIK 
Sbjct: 47  YFKNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEV-GIKK 105

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
             + I G  ++     E+G+HRLVR SP+++ +++ TSF  + V P ++ +    I+
Sbjct: 106 VEIKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTSFVKVDVIPTLNFNDLNVIN 162


>gi|218552840|ref|YP_002385753.1| peptide chain release factor-like protein [Escherichia coli IAI1]
 gi|218359608|emb|CAQ97149.1| putative peptide chain release factor [Escherichia coli IAI1]
          Length = 166

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGHYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|89107109|ref|AP_000889.1| predicted peptide chain release factor [Escherichia coli str. K-12
           substr. W3110]
 gi|256024120|ref|ZP_05437985.1| peptide chain release factor-like protein [Escherichia sp. 4_1_40B]
 gi|307136901|ref|ZP_07496257.1| peptide chain release factor-like protein [Escherichia coli H736]
 gi|331640765|ref|ZP_08341900.1| putative peptide chain release factor H [Escherichia coli H736]
 gi|115311624|sp|P28369|RFH_ECOLI RecName: Full=Putative peptide chain release factor homolog;
           Short=RF-H
 gi|1552804|gb|AAB08656.1| PrfH [Escherichia coli]
 gi|85674391|dbj|BAA77905.2| predicted peptide chain release factor [Escherichia coli str. K12
           substr. W3110]
 gi|315134921|dbj|BAJ42080.1| peptide chain release factor 2 [Escherichia coli DH1]
 gi|315616801|gb|EFU97418.1| putative peptide chain release factor H [Escherichia coli 3431]
 gi|331037563|gb|EGI09783.1| putative peptide chain release factor H [Escherichia coli H736]
          Length = 166

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|319937084|ref|ZP_08011493.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1]
 gi|319807862|gb|EFW04447.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1]
          Length = 197

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 15/208 (7%)

Query: 118 YLEVHAGAG-GT-ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            +++ +G G G  E +    +L +   +         E +  H   +  +KSA       
Sbjct: 2   LIQISSGHGKGIKECEYACCLLYKELLKEFSS----LEVVSTHYSNKECLKSAIF----- 52

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                L   +G  + +  SPY  + +R   F  + +   + + I+I+ + +D R + +R+
Sbjct: 53  YTEKDLSFLEGTVQWICQSPYRPHHKRKNWFIDVSI---IKEDIKID-NTNDIRYEVFRS 108

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ+VN   +A+R  HIPTG+V     +RSQ +NK  A+  L  K+ E      + I
Sbjct: 109 SGKGGQNVNKVSTAIRAIHIPTGIVTVSMDQRSQLQNKKIAYLRLLEKIDETSSSINKSI 168

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMV 323
             +      +I  G  IR Y    +  +
Sbjct: 169 HYLNWVKHNQIERGNPIRVYKGMKFIRI 196


>gi|194438235|ref|ZP_03070327.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|253774739|ref|YP_003037570.1| peptide chain release factor-like protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160350|ref|YP_003043458.1| peptide chain release factor-like protein [Escherichia coli B str.
           REL606]
 gi|297520538|ref|ZP_06938924.1| peptide chain release factor-like protein [Escherichia coli OP50]
 gi|312970362|ref|ZP_07784543.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|194422899|gb|EDX38894.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|242376066|emb|CAQ30751.1| prfH [Escherichia coli BL21(DE3)]
 gi|253325783|gb|ACT30385.1| peptide chain release factor H [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972251|gb|ACT37922.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253976460|gb|ACT42130.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|310337011|gb|EFQ02149.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|332341589|gb|AEE54923.1| peptide chain release factor-like protein PrfH [Escherichia coli
           UMNK88]
          Length = 166

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + E E S++  R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RFT----ADEKEQSDA-IRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|266622646|ref|ZP_06115581.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
 gi|288865627|gb|EFC97925.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
          Length = 206

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 14/205 (6%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNA 177
           +++ +G G  E +    +L     R A         L    G++  G  S     +    
Sbjct: 3   IQISSGQGPAECELAVGLLYEELKREAPD----IRLLSFTQGKKREGFSSIMFETEHD-- 56

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
                  +G    +  SPY    +R   +  + +     +++     E   R +T+++ G
Sbjct: 57  ---FTSLEGSVLWICKSPYRPEHKRKNWYVDVSIL----ETVPRVTEEKLVRFETFKSGG 109

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ+VN  ++ VR  HIPTG  V   + RSQH NK  A N L   L E+ L+      N
Sbjct: 110 KGGQNVNKVETGVRAIHIPTGTAVVSTEARSQHMNKQAALNRLCEILAEMNLESGRREKN 169

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQM 322
           +     T +  G  +R Y  + + +
Sbjct: 170 LAWMEHTRLERGNPVRVYEGRAFHL 194


>gi|227357000|ref|ZP_03841372.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
 gi|227162878|gb|EEI47837.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
          Length = 203

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 6/193 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L+  +  G  E        L  +    E+R+     LE       G+KS  + +KG  A
Sbjct: 2   LLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQVDVIILEQEPS-RYGLKSVLVSLKGAEA 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +   G  +    S      +R   F  I  +    +  + EI       +T RA+G
Sbjct: 61  KAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGIAYFEPPQEIQDTEIL-----FETMRANG 115

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN T SAVR THI TG+ V+ Q +RSQH NK  A  ++   L     Q++    N
Sbjct: 116 PGGQHVNKTSSAVRATHIATGISVKIQSQRSQHANKKLAKQLIAWHLNHYLSQQQASFNN 175

Query: 298 IGESSKTEIGWGR 310
               +   +  G 
Sbjct: 176 QRHLAHHRVIRGN 188


>gi|271961827|ref|YP_003336023.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270505002|gb|ACZ83280.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 219

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 3/196 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177
           L + AG G  E       LLR     A ++  +T   +   G+     +S  + I G  A
Sbjct: 5   LLLSAGRGPQECAWALARLLRRLEADATRQNLETHRAQTVPGDRPDTYRSVLIQISGAGA 64

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             +     G       SPY + + R   +  +   P   D+     +E+D  I   R  G
Sbjct: 65  EAFAASWTGTLCWQAPSPYRAGTGRKNWY--VIAQPCQVDTPRTTFAEADVDIVACRTGG 122

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQH N   +AVR TH P+G+VV    ER    N+  A  +LR ++ + +      +  
Sbjct: 123 PGGQHRNKASTAVRATHRPSGIVVVVDTERQFSLNRRIAMRLLRQRIEDGDATAGRAVTT 182

Query: 298 IGESSKTEIGWGRQIR 313
                  E+  G   R
Sbjct: 183 ARWRVHDELVRGNPTR 198


>gi|320654680|gb|EFX22681.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
          Length = 166

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + + +SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R SG GGQHVN TD AVR TH+ TG+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRPSGPGGQHVNKTDLAVRATHLATGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|218693719|ref|YP_002401386.1| peptide chain release factor-like protein [Escherichia coli 55989]
 gi|218350451|emb|CAU96139.1| putative peptide chain release factor [Escherichia coli 55989]
          Length = 166

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|218698820|ref|YP_002406449.1| peptide chain release factor-like protein [Escherichia coli IAI39]
 gi|218368806|emb|CAR16554.1| putative peptide chain release factor [Escherichia coli IAI39]
          Length = 166

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|145594573|ref|YP_001158870.1| class I peptide chain release factor [Salinispora tropica CNB-440]
 gi|145303910|gb|ABP54492.1| Class I peptide chain release factor [Salinispora tropica CNB-440]
          Length = 202

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 3/202 (1%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG 174
           + +L + AG G  E       LL      A +       L+   G+  G  +S  + + G
Sbjct: 2   NLHLLLSAGRGPQECAWALARLLSRLEADAVRNDVDVVRLDSVVGDRPGTYRSVLVRLTG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
                +     G       SPY +   R   +  +       D      +E+D  +   R
Sbjct: 62  TGVEAFAARWTGTLCWQAPSPYRTGHGRKNWY--VAARQCEVDVPVTPFTEADVEVLAVR 119

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
             G GGQH N   +AVR TH PTG VV    ER    N++ A  +LR ++   +   R  
Sbjct: 120 TGGPGGQHRNKASTAVRATHRPTGTVVVVDTERQLSLNRSIALRLLRQRITAGDEAARRA 179

Query: 295 IANIGESSKTEIGWGRQIRSYV 316
           +  I   +  E+  G   R+  
Sbjct: 180 LVAIRRRAHDEVVRGGPTRTER 201


>gi|74310877|ref|YP_309296.1| peptide chain release factor-like protein [Shigella sonnei Ss046]
 gi|82542839|ref|YP_406786.1| peptide chain release factor-like protein [Shigella boydii Sb227]
 gi|188494291|ref|ZP_03001561.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|73854354|gb|AAZ87061.1| probable peptide chain release factor [Shigella sonnei Ss046]
 gi|81244250|gb|ABB64958.1| probable peptide chain release factor [Shigella boydii Sb227]
 gi|188489490|gb|EDU64593.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|323171088|gb|EFZ56737.1| putative peptide chain release factor H [Escherichia coli LT-68]
 gi|332098554|gb|EGJ03520.1| putative peptide chain release factor H [Shigella boydii 3594-74]
          Length = 166

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|256426219|ref|YP_003126872.1| peptide chain release factor-like protein [Chitinophaga pinensis
           DSM 2588]
 gi|256041127|gb|ACU64671.1| peptide chain release factor H [Chitinophaga pinensis DSM 2588]
          Length = 210

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIK 173
           N + ++V AG G  E       ++ M  + A  +      LE   G   G   SA LLI+
Sbjct: 2   NKSIIQVTAGRGPEECSRVVARVVEMMMKDARGKALDITLLESTKGHLKGTLLSAVLLIQ 61

Query: 174 GPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
                       +++  +G  + V  SP+    +R   F  + V+ V       E +  D
Sbjct: 62  TGGISSNKTLEAFIQEWRGTIQWVAQSPFRKYHKRKNWFVGVEVFDVNKQQ---EWNLKD 118

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            ++++ RASG GGQHVN  ++AVR TH+P+G+ V     RSQ +NK      L AK    
Sbjct: 119 VKLESCRASGPGGQHVNKVETAVRGTHLPSGMQVLAMDSRSQLENKQLCLKRLEAKFMAW 178

Query: 288 ELQKREEIANIGESSKTEIGWGR 310
           ++++             E+  GR
Sbjct: 179 QMEQLLAKQQDQWQEHNELERGR 201


>gi|225631245|ref|ZP_03787932.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591056|gb|EEH12251.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 178

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 7/175 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++ + +    E+P       E   L +E   L   I  I E      +   L E+
Sbjct: 5   LQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEEI 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEV------EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +E+    ++E +      K +V         +   L   E DS +A LE+ AG GG E
Sbjct: 64  MKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E
Sbjct: 124 AALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFE 178


>gi|323160301|gb|EFZ46254.1| putative peptide chain release factor H [Escherichia coli E128010]
          Length = 166

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAF 163


>gi|46190861|ref|ZP_00121023.2| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 115

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 1/105 (0%)

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L   + E       +   +  WG
Sbjct: 1   MRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELAGDIKASWG 59

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 60  DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 104


>gi|218550059|ref|YP_002383850.1| peptide chain release factor-like protein [Escherichia fergusonii
           ATCC 35469]
 gi|218357600|emb|CAQ90239.1| putative peptide chain release factor [Escherichia fergusonii ATCC
           35469]
          Length = 166

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 9/170 (5%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            NK  A  ++  KL + + +    + +       +I  G   R +    +
Sbjct: 114 ANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRIFTGMAF 163


>gi|302420205|ref|XP_003007933.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
 gi|261353584|gb|EEY16012.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
          Length = 253

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 28/192 (14%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGI----------KSATLLIKGPNAYGWLKGEQGVHR 189
           MY ++     ++  AL+    + AG           + A L IK   AYG  +GE G+HR
Sbjct: 1   MYKQYCAYMGYRAVALKYEMADGAGSASTSAGEEPLQEAVLEIKDAGAYGLFRGEAGMHR 60

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDS------------------IEIEISESDCRID 231
           + R+   + + R HTS  ++WV P   DS                   +  +  ++ RI+
Sbjct: 61  VQRVPDTEKSGRTHTSAVAVWVLPSFPDSHEAAGGGGGGDMNVDDPASDFYLDPAELRIE 120

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+R+TH+PTG VV  Q  R Q +N+  AW ++R+++  L  + 
Sbjct: 121 TMRARGAGGQHVNKTESAIRMTHLPTGTVVSMQDSRQQSRNREDAWKLMRSRVALLRREA 180

Query: 292 REEIANIGESSK 303
           REE A     + 
Sbjct: 181 REEQAARLRDND 192


>gi|323486906|ref|ZP_08092222.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323691951|ref|ZP_08106201.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323399769|gb|EGA92151.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323504009|gb|EGB19821.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 197

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 12/202 (5%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +G G  E +  A +  R   +     +       +   +  G  S     +     
Sbjct: 3   IQISSGQGPAECELAAELFYRQLQKEIGDIRM---VQCVRGSKAKGFSSVIFETEED--- 56

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             +   +G    V  SPY    +R   +  + +     +++     E   R +T+R+ G 
Sbjct: 57  --MSSLEGSILWVCKSPYRPKHKRKNWYIDVSIL----ENMPKLTQELKLRFETFRSGGK 110

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++ VR+ HIPTG+ V   + RSQH NK  A N L   L E  ++   +   +
Sbjct: 111 GGQNVNKVETGVRVIHIPTGISVVSTEARSQHMNKKLAVNRLCDILAERNMESGRKEKEL 170

Query: 299 GESSKTEIGWGRQIRSYVLQPY 320
                  +  G  +R Y    +
Sbjct: 171 AWLEHNRLERGNPVRIYEGGNF 192


>gi|108763642|ref|YP_629741.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
 gi|108467522|gb|ABF92707.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
          Length = 966

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 64/339 (18%), Positives = 127/339 (37%), Gaps = 46/339 (13%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
               QR + L  +T+ P+LW +   A  ++R  + ++  ++ ++ ++        L+  A
Sbjct: 660 PQLEQRRAELLAETQAPNLWDDPTRAAEVIRAFRTVEAQLNELERLEAAGLFARRLVREA 719

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQ-DW 133
             E     L   +  ++ +  EV+  +  +L +  A + D  A +++ A +   E+Q  W
Sbjct: 720 KNE---VQLGSAARQVEDVAREVQMAE--ALHASGATTQDTEALVDICA-SDSVEAQATW 773

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L  MY  WA++R +      +   E        + I GP AYG+L GE G+HR +  
Sbjct: 774 VQELATMYLGWAQRRGY----EAVAVAEAEEPSRVVVRIAGPGAYGFLAGEAGMHRRLE- 828

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
                + +R  ++  +     + +        +   +         G ++    + V + 
Sbjct: 829 -----DEKRQRAYVRVHRGGSLSEE-----ELAYLEVQGRPMKSHEGAYLQRVRTEVTVK 878

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
              +G V+         + K  A  ++                        +     + R
Sbjct: 879 DESSGRVLTLTGATELDELKDIAARVV----------------------YGQGSNTDEAR 916

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            Y L     V+D RT        DVL G+LD F+ A + 
Sbjct: 917 RYYLGRGARVEDPRTGAGTPRVKDVLRGELDVFIAAWIT 955


>gi|239982309|ref|ZP_04704833.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 241

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 23  VEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAREL 82

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A ++ D          L+  + E+ E  +   +    +D  D  LE+ AGAGG ES  +A
Sbjct: 83  AADDPD---FAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFA 139

Query: 135 NMLLRMYTRW 144
             LLR   RW
Sbjct: 140 GDLLRPPRRW 149


>gi|116335021|ref|YP_802516.1| peptide chain release factor B [Candidatus Carsonella ruddii PV]
 gi|116235302|dbj|BAF35150.1| peptide chain release factor B [Candidatus Carsonella ruddii PV]
          Length = 270

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 62/178 (34%), Positives = 103/178 (57%), Gaps = 2/178 (1%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           L+ + ++ + ++E+ +  GG ++ D     L  Y +W  K KF  E + + +    G K 
Sbjct: 40  LNIKFNNLNCFVEIISNQGGIDTHDLNKFFLNFYYKWLLKNKFNVEIINL-EQSPYGYKK 98

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           + LLI    ++   K E G+HR++R +P  S+ +  TS+ ++ + P + +++   I+++D
Sbjct: 99  SLLLINNFFSFFLFKNESGLHRIIRKNPLISSKKIQTSYLNLNIVPKIINNVNF-INKND 157

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             I+ YR+ G+GGQHVNTT+SA+RI H PT +VV  Q ERSQ  NK  A   L  KL 
Sbjct: 158 LIIENYRSKGSGGQHVNTTNSAIRIVHKPTNIVVTSQSERSQMLNKKFAMQTLEYKLL 215


>gi|197287314|ref|YP_002153186.1| peptide chain release factor [Proteus mirabilis HI4320]
 gi|194684801|emb|CAR46873.1| probable peptide chain release factor [Proteus mirabilis HI4320]
          Length = 203

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 6/193 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L+  +  G  E        L  +    E+R+     LE       G+KS  + +KG  A
Sbjct: 2   LLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQVDVIILEQEPS-RYGLKSVLVSLKGAEA 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               +   G  +    S      +R   F  I  +    +  + EI       +T RA+G
Sbjct: 61  KAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGIAYFDPPQEIQDTEIL-----FETMRANG 115

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN T SAVR THI TG+ V+ Q +R QH NK  A  ++   L     Q++    N
Sbjct: 116 PGGQHVNKTSSAVRATHIATGISVKIQSQRIQHANKKLAKQLIAWHLTHYLSQQQASFNN 175

Query: 298 IGESSKTEIGWGR 310
               +   +  G 
Sbjct: 176 QRHLAHHRVIRGN 188


>gi|291454153|ref|ZP_06593543.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357102|gb|EFE84004.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 223

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 5   VEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A ++ D          L+  + E+ E  +   +    +D  D  LE+ AGAGG ES  +A
Sbjct: 65  AADDPD---FAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFA 121

Query: 135 NMLLRMYTRW 144
             LLR   RW
Sbjct: 122 GDLLRPPRRW 131


>gi|302866524|ref|YP_003835161.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315502934|ref|YP_004081821.1| peptide chain release factor h [Micromonospora sp. L5]
 gi|302569383|gb|ADL45585.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315409553|gb|ADU07670.1| peptide chain release factor H [Micromonospora sp. L5]
          Length = 201

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 77/196 (39%), Gaps = 3/196 (1%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177
           L + AG G  E       LL      A +R  +TE +E   G+ AG  +S  + I G  A
Sbjct: 4   LLLSAGRGPAECAWALARLLSRLEGEAARRGLRTERVETVPGDRAGTYRSVLVRITGAGA 63

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             +  G  G       SPY +   R   +  +       D +     E+D      R  G
Sbjct: 64  EAFAAGWTGTLCWQAPSPYRTGHGRKNWY--VTARTCRTDVVVTPFHEADVEFVPCRTGG 121

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQH N   +AVR TH P+G  V    ER  H N+  A  +LR ++   +   R    +
Sbjct: 122 PGGQHRNKASTAVRATHRPSGRTVVVDTERHLHLNRRIAVELLRQRIAADDEAARRAGVD 181

Query: 298 IGESSKTEIGWGRQIR 313
                  E+  G  +R
Sbjct: 182 ARWRVHDELVRGDPVR 197


>gi|107104573|ref|ZP_01368491.1| hypothetical protein PaerPA_01005652 [Pseudomonas aeruginosa PACS2]
          Length = 207

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE     +S  L ++G 
Sbjct: 5   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 64

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     S+E EI     R +T R+
Sbjct: 65  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRS 119

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 120 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 179

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                 +   I  G   R +  + +
Sbjct: 180 RAERRRAHGRISRGAARRVFRGERF 204


>gi|218894572|ref|YP_002443442.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           LESB58]
 gi|218774801|emb|CAW30619.1| probable peptide chain release factor [Pseudomonas aeruginosa
           LESB58]
          Length = 204

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E LE   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVTGERPRTWRSLLLGLRGI 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     S+E EI     R +T R+
Sbjct: 62  AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                 +   I  G   R +  + +
Sbjct: 177 RAERRQAHGRISRGAARRVFRGERF 201


>gi|296392334|ref|ZP_06881809.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAb1]
          Length = 204

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERSRTWRSLLLGLRGT 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     S+E EI     R +T R+
Sbjct: 62  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                 +   I  G   R +  + +
Sbjct: 177 RAERRQAHGRISRGAARRVFRGERF 201


>gi|116053620|ref|YP_793947.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115588841|gb|ABJ14856.1| putative peptide chain release factor [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 204

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E LE   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVAGERPRTWRSLLLGLRGI 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     S+E EI     R +T R+
Sbjct: 62  AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                 +   I  G   R +  + +
Sbjct: 177 RAERRQAHGRISRGAARRVFRGERF 201


>gi|15600663|ref|NP_254157.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAO1]
 gi|254237846|ref|ZP_04931169.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|254243022|ref|ZP_04936344.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
 gi|9951802|gb|AAG08855.1|AE004959_11 probable peptide chain release factor [Pseudomonas aeruginosa PAO1]
 gi|126169777|gb|EAZ55288.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|126196400|gb|EAZ60463.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
          Length = 204

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     S+E EI     R +T R+
Sbjct: 62  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                 +   I  G   R +  + +
Sbjct: 177 RAERRRAHGRISRGAARRVFRGERF 201


>gi|261884219|ref|ZP_06008258.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 115

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/107 (40%), Positives = 64/107 (59%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
             K ++  + D   L ELA  EDD   +    ++ Q ++ ++   +   +LSGE DS +A
Sbjct: 8   KFKNVKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGEDDSKNA 67

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            + +H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG
Sbjct: 68  IVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAG 114


>gi|70936414|ref|XP_739155.1| peptide release factor [Plasmodium chabaudi chabaudi]
 gi|56515938|emb|CAH84701.1| peptide release factor, putative [Plasmodium chabaudi chabaudi]
          Length = 210

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 4/177 (2%)

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE--IEISE 225
               IKG   Y     E G+HR+ RI       +  TS   ++      + +E  ++I +
Sbjct: 4   IIAHIKGEGVYVDFIQEIGIHRVQRIPINSKKMQTSTSIVLLFDEKQTKEKLEKKMKIPK 63

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I+T R+ GAGGQ VN  ++ V+ITH PT + V+ Q+  SQ +NK+ A +M++ KLY
Sbjct: 64  NDFIIETKRSGGAGGQSVNKNETCVKITHKPTNIFVEVQKTSSQIQNKSIAMDMIKNKLY 123

Query: 286 E-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                Q++       ++ K       +IR+Y    +  V D   N++ T       G
Sbjct: 124 NFYYEQEKMNFLKDKKNQKQNGDRSEKIRTYNFS-HNTVIDHIANVQYTGIDQFFKG 179


>gi|313111591|ref|ZP_07797390.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
 gi|310883892|gb|EFQ42486.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
          Length = 204

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 6/205 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F           S+E EI     R +T R+
Sbjct: 62  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERLAAPPASLEGEI-----RFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPY 320
                 +   I  G   R +  + +
Sbjct: 177 RAERRRAHGRISRGAARRVFRGERF 201


>gi|162455289|ref|YP_001617656.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
 gi|161165871|emb|CAN97176.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
          Length = 222

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 7/204 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ AG G  E + +   L        ++R           G+E    S  +L++G  A
Sbjct: 5   WVQISAGRGPIEVRRFVARLAERMEALCQERGLAV-VDVTLHGDEDAPASVEILVEGD-A 62

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-----ISESDCRIDT 232
              L+GE G H LV  S     + R   F+ + ++    D+         +   +  I  
Sbjct: 63  RRCLEGELGTHALVERSAARGKAARKRWFAGVAIHAAGADAGAGAGEGVGVDLRELEISA 122

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQHVN T SAVRI H P+G+ V+   ERSQ  N  +    +  +L E   ++ 
Sbjct: 123 CRASGPGGQHVNKTLSAVRIHHRPSGITVRVADERSQRANVRRGVERIAERLAERAARRV 182

Query: 293 EEIANIGESSKTEIGWGRQIRSYV 316
            E      S    I  G  +R+Y 
Sbjct: 183 AEGEAARWSEHDRIVRGEPVRTYR 206


>gi|220679233|emb|CAX12804.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 273

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 6/166 (3%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L + +  IK+++ +  +   + +L  + +D  +L+      + +  +++  + +     E
Sbjct: 110 LAHLVHNIKKLEVKQKEMEDMQDLLKD-NDPELLELAETEKEAVLADIQDLRQK-----E 163

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D ++  LEV AG GG E+  +   +  MY  +A    +  + LE +  E  G++ A+  
Sbjct: 164 SDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASAS 223

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
           + GP +Y  LK E GVHR+ R+   +S  R HTS  ++ + P   +
Sbjct: 224 VSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTE 269


>gi|289678407|ref|ZP_06499297.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 145

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + ++  + ++   + +     L     D  + +LE+ AG GG E+ 
Sbjct: 69  LKDS-DPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRK 149
            ++  L RMY+R+AE+R 
Sbjct: 128 IFSGDLFRMYSRYAERRG 145


>gi|407639|gb|AAD12326.1| unknown [Mycoplasma genitalium]
          Length = 113

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 6/113 (5%)

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PTG+VV CQ+ +SQ  N+ +A  MLRAKL+E    K  +++   +  K++
Sbjct: 1   TESAVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNK--QLSTQADLRKSQ 58

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +G G    +IR+Y   P   + D R  +     + V+ GDLD+ ++A  A ++
Sbjct: 59  VGSGERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQADER 110


>gi|290984795|ref|XP_002675112.1| predicted protein [Naegleria gruberi]
 gi|284088706|gb|EFC42368.1| predicted protein [Naegleria gruberi]
          Length = 156

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 62/155 (40%), Positives = 92/155 (59%), Gaps = 4/155 (2%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L++ ++FI      + +N  LL+L+  E+D  +++    +L  +   +E K+ ES LSG 
Sbjct: 2   LEDQLNFIDNTIADINNNEELLKLSEMENDKEMIEYIQKSLSDLINVLEKKEIESFLSGP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMY---TRWAEKRKFKTEALEIHDGEEAGIKSA 168
            DS D YLE+H GAGG ++ DW+ MLL MY    R +E   F+    +    E  GI+SA
Sbjct: 62  HDSKDCYLEIHTGAGGEDASDWSQMLLNMYINCLRGSELSSFEVTLEDTSFKET-GIRSA 120

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
            L I G  AYG+LK EQGVHRLVR+SP++++    
Sbjct: 121 LLFISGRYAYGYLKHEQGVHRLVRLSPFNADVSIQ 155


>gi|167590758|ref|ZP_02383146.1| peptide chain release factor-like protein [Burkholderia ubonensis
           Bu]
          Length = 177

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 6/172 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPN 176
            L++ +  G  E Q  A   L+     A+  +     L++  GE  G  +S  L + G +
Sbjct: 2   LLQISSAHGPAECQLAAAKALQRLQAEADACRVALTVLDLQPGERPGTVRSVLLDLDGAD 61

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A        G  + +  SPY     R   F  +             + +   + +  RA 
Sbjct: 62  AAALADRWAGTLQWICASPYRLRHPRKNWFVGVTRCADAP-----PLPDGAVKFEAMRAR 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G GGQHVN T SA+R TH+ TG  V+ + ERSQH NK  A  +L A+L E  
Sbjct: 117 GPGGQHVNKTSSAIRATHLATGTSVRVESERSQHANKRLALQLLHARLREQA 168


>gi|313226924|emb|CBY22069.1| unnamed protein product [Oikopleura dioica]
          Length = 394

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 24/291 (8%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLL---SGEADSNDAYLEVHAG 124
            L E   +E D  +     + ++  +  +   +   F+ L    + EA+  +  +E  AG
Sbjct: 72  ELSENVAKESDAEMKDLLQEEIKEAEERIGEIEEEVFDVLAEYETEEAEKANFVVE--AG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  LL  Y  + E   +  E +   + E   +    +++ G NA+     E
Sbjct: 130 AGGDEAGIFARELLDHYLLFFEFMNWDYEQVNRDE-ENGMLTEGHIVVSGLNAFNRNLAE 188

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ RI    + ++ HTS  ++ V P + +   I+I E +  I + R SG GGQ +N
Sbjct: 189 AGVHRVARIP--QNATKLHTSTCAVKVTP-ILERRLIDIPEKELDISSCRGSGKGGQKIN 245

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN------- 297
           T  +   + HIP+G+     +     +N   A N+ +AK     + +  + A        
Sbjct: 246 TVHARAVVKHIPSGITTTYFE---PGRNNTLAANIEKAKEELRSILQARQDAEFEREFLG 302

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
              S  T    G +IR+Y      +V D RT  +  +      G   + M+
Sbjct: 303 FKNSMNTNFERGERIRNYSWS-NNIVTDYRTKRK-FNLQKYFSGAGFEMME 351


>gi|264679478|ref|YP_003279385.1| class I peptide chain release factor [Comamonas testosteroni CNB-2]
 gi|262209991|gb|ACY34089.1| Class I peptide chain release factor [Comamonas testosteroni CNB-2]
          Length = 195

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 9/201 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +++ +  G  E +    + LR   +         E LE      AG +S  L  +    
Sbjct: 3   LMQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVEVLEEFRTP-AGYRSVLLRCERET- 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRAS 236
              L+   G  + +  SP+     R   F ++         +++ EI    C+     AS
Sbjct: 61  -PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAMDGEIQFQSCK-----AS 114

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL +   +   +  
Sbjct: 115 GKGGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLARELLAIKLAQHNARSEGQAQ 174

Query: 297 NIGESSKTEIGWGRQIRSYVL 317
            +      E+  G+ I+ + L
Sbjct: 175 RLRSQQHWEVERGQAIKVFRL 195


>gi|195611870|gb|ACG27765.1| peptide chain release factor 2 [Zea mays]
          Length = 262

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 3/182 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A QR+       +  +LW N  ++   +         +  +K+++ +  +  ++ 
Sbjct: 69  LELEEA-QRIKQ-EEVLQKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLIS 126

Query: 74  ELAL-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L+  +  +  + ++   +       ++  Q   LL G  D   A + V A + G  S+ 
Sbjct: 127 QLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACIIVTAVSNGVTSEL 186

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  +  MYT WA K+ +K   +E        I+SAT+ I+    +G L GE+G+H+++ 
Sbjct: 187 WAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSATMEIESEYMFGTLSGEKGMHQMIY 246

Query: 193 IS 194
            S
Sbjct: 247 SS 248


>gi|299530560|ref|ZP_07043980.1| Class I peptide chain release factor [Comamonas testosteroni S44]
 gi|298721536|gb|EFI62473.1| Class I peptide chain release factor [Comamonas testosteroni S44]
          Length = 195

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 9/201 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +++ +  G  E +    + LR   +         + LE      AG +S  L  +    
Sbjct: 3   LMQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVKVLEESRTP-AGCRSVLLRCERET- 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRAS 236
              L+   G  + +  SP+     R   F ++         +++ EI    C+     AS
Sbjct: 61  -PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAMDGEIQFQSCK-----AS 114

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL +       +  
Sbjct: 115 GKGGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLARELLAIKLAQHNALSEGQAQ 174

Query: 297 NIGESSKTEIGWGRQIRSYVL 317
            +       +  G+ ++ + L
Sbjct: 175 RLRNQQHWGVERGQAVKVFRL 195


>gi|281356039|ref|ZP_06242532.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
 gi|281317408|gb|EFB01429.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
          Length = 204

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 5/200 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPN 176
           +LE+ +G G  E +     L+   T    +  +F+ E     + E++ +KS    ++G  
Sbjct: 5   FLEISSGQGPEECELLVAKLMVRLTSELRREVRFR-EVALNGNREKSLVKSVLFELEGEG 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A   +    G  + +  SP+  + +R   ++ I ++       E+    +D      R+S
Sbjct: 64  AAVSVAPWLGTIQWIAASPFRPHHKRRNWYAGIRLFEAEP---ELAFDPNDVEFSASRSS 120

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVNT+++ ++  H PTG      +ERSQ +N+  A   L AK+          + 
Sbjct: 121 GPGGQHVNTSNTRIQAFHRPTGQCAVAGEERSQLRNRELALARLAAKVATRGSAGSARLG 180

Query: 297 NIGESSKTEIGWGRQIRSYV 316
                +  E+  G+ +R + 
Sbjct: 181 LEAWRAHRELERGKPVRVFR 200


>gi|326789649|ref|YP_004307470.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
 gi|326540413|gb|ADZ82272.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
          Length = 195

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 14/206 (6%)

Query: 119 LEVHAGAGGTESQDWANM-LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           +++ +G G  E +    M   ++   ++  +      +E H G+  G  +         A
Sbjct: 3   VQISSGKGPCECELAVGMYFEKLKEEYSNLK-----LVEAHQGKAKGCFTYITCELDEAA 57

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
                 +QG    +  SPY +N +R   +  + +   V      EI     R +T+R+ G
Sbjct: 58  ----DLKQGSVLWICESPYRANCKRKNWYIDVSILEEVKKVSTEEI----IRFETFRSGG 109

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN  ++ VR  H+PTG+ V   + RSQH NK  A N L   L ++     ++   
Sbjct: 110 KGGQHVNKVETGVRAIHMPTGIAVVSTEARSQHMNKQIAMNRLLDLLAQVNEDANQKEKQ 169

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMV 323
           +    +  +  G  IR +  + ++ +
Sbjct: 170 LAWLEQNRLIRGNPIRIFKGRDFKEI 195


>gi|170728229|ref|YP_001762255.1| peptide chain release factor H [Shewanella woodyi ATCC 51908]
 gi|169813576|gb|ACA88160.1| peptide chain release factor H [Shewanella woodyi ATCC 51908]
          Length = 218

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 19/221 (8%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL----- 171
             L++ AG G         + L+   +   ++    + +E  + +E     + LL     
Sbjct: 2   ILLQLSAGQGPAACCKAIGLALKEIEKQCREKGVAFDLIEAIETKERFCFKSVLLQLESK 61

Query: 172 ----IKGPNAYGWLKGEQGVHRLVRISPY-----DSNSRRHTSFSSIWVYPVVDDSIEIE 222
                +   A    K  QG    +  SP+        ++R   F S  +Y   +  ++ E
Sbjct: 62  QSVLGEDDLAKQLAKSWQGAMLWICQSPFQLEKNRVKNKRKNWFFSGQMYEFNETELDKE 121

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +S   CR     ASGAGGQHVNTTDSAVR  H+ TG+ V+ + ERSQH NK  A  +L  
Sbjct: 122 VSFQTCR-----ASGAGGQHVNTTDSAVRAIHVATGISVRVESERSQHANKRLARALLFQ 176

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           KL   ++++             E+  G  ++++  + + +V
Sbjct: 177 KLESTKVEQMSLQEKARWQQHWEVERGNPVKTFKGEKFTLV 217


>gi|24111726|ref|NP_706236.1| peptide chain release factor 2 [Shigella flexneri 2a str. 301]
 gi|30061853|ref|NP_836024.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|24050507|gb|AAN41943.1| probable peptide chain release factor [Shigella flexneri 2a str.
           301]
 gi|30040097|gb|AAP15830.1| probable peptide chain release factor [Shigella flexneri 2a str.
           2457T]
          Length = 151

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 139 RMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
               + A ++      LE   G     ++SA + + G NA+   +   G  + +  SPY 
Sbjct: 6   DRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYR 65

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            +  R   F  I  +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +
Sbjct: 66  PHHGRKNWFLGIGRF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLAS 120

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           G+ V+ Q ERSQH NK  A  ++  KL + +
Sbjct: 121 GISVKVQSERSQHANKRLARLLIAWKLDQQQ 151


>gi|219362723|ref|NP_001136772.1| hypothetical protein LOC100216914 [Zea mays]
 gi|194697000|gb|ACF82584.1| unknown [Zea mays]
          Length = 262

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 3/182 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A QR+       +  +LW N  ++   +         +  +K+++ +  +  ++ 
Sbjct: 69  LELEEA-QRIKQ-EEVLQKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLIS 126

Query: 74  ELAL-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L+  +  +  + ++   +       ++  Q   LL G  D   A + V A + G  S+ 
Sbjct: 127 QLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACIIVTAVSNGVTSEL 186

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  +  MYT WA K+ +K   +E        I+SAT+ I+    +G L GE+G+H+++ 
Sbjct: 187 WAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSATMEIESEYMFGTLSGEKGMHQMIY 246

Query: 193 IS 194
            S
Sbjct: 247 SS 248


>gi|301344980|ref|ZP_07225721.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513510|ref|ZP_07238747.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597421|ref|ZP_07242429.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 127

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 2/110 (1%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +    +   +    
Sbjct: 1   HINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRR 60

Query: 302 SKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                G    +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 61  DLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 109


>gi|332213671|ref|XP_003255948.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 4 [Nomascus leucogenys]
          Length = 235

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 42/208 (20%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRHAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|302857242|ref|XP_002959826.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
 gi|300254224|gb|EFJ39110.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
          Length = 194

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 1/103 (0%)

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             YG L  E GVHR+ R+   ++  R HTS  ++ V P   D +++++ + D RI+T RA
Sbjct: 93  GVYGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVLPQA-DEVDVKLRDEDLRIETMRA 151

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+A A  
Sbjct: 152 SGAGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLNRAAALK 194


>gi|77415494|gb|AAI05974.1| MTRF1L protein [Homo sapiens]
          Length = 235

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 42/208 (20%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRHAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|221065979|ref|ZP_03542084.1| peptide chain release factor H [Comamonas testosteroni KF-1]
 gi|220711002|gb|EED66370.1| peptide chain release factor H [Comamonas testosteroni KF-1]
          Length = 195

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 9/201 (4%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +++ +  G  E +    + LR   +         E LE      AG +S  L  +    
Sbjct: 3   LMQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVEVLEEFRTP-AGYRSVLLRCERET- 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRAS 236
              L+   G  + +  SP+     R   F ++         +++ EI    C+     AS
Sbjct: 61  -PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLTMDGEIQFQSCK-----AS 114

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL     + + +  
Sbjct: 115 GKGGQHVNTTDSAVHALHVPSGMAVKVMSERSQHANKQLARELLAIKLARHNARSQGQAQ 174

Query: 297 NIGESSKTEIGWGRQIRSYVL 317
            +      E+  G+ ++ + L
Sbjct: 175 RLRSQQHREVERGQAVKVFRL 195


>gi|114609873|ref|XP_001140447.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 1 [Pan troglodytes]
          Length = 235

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 42/208 (20%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ I+ + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRHAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|56203460|emb|CAI18899.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 235

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 42/208 (20%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----S 109
             ++ IK + ++  +      L  +E+   + +   + +   + E+   + + +L    S
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDEN-EDLRKLAENEITLCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D ND  LEV AG GG                                    G++ A+
Sbjct: 122 EETDENDLILEVTAGVGG------------------------------------GLRHAS 145

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  D R
Sbjct: 146 ASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLR 204

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPT 257
           IDT RASGAGGQHVNTTDSAVRI H+PT
Sbjct: 205 IDTKRASGAGGQHVNTTDSAVRIVHLPT 232


>gi|195351215|ref|XP_002042131.1| GM10257 [Drosophila sechellia]
 gi|194123955|gb|EDW45998.1| GM10257 [Drosophila sechellia]
          Length = 166

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            I++ I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A 
Sbjct: 5   DIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAM 64

Query: 278 NMLRAKLYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSP 335
             LR++L + +L+  E       ++ +  +    +IR+Y       + D R       + 
Sbjct: 65  KRLRSRLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNF-VQDRITDHRIQGGTLHNL 123

Query: 336 SDVLDG--DLDDFMK 348
              L G   L   ++
Sbjct: 124 DGFLKGGDQLSGLIE 138


>gi|213583820|ref|ZP_03365646.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 95

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 1/94 (1%)

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           + QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL  
Sbjct: 1   MTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD 60

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 61  S-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 93


>gi|281599646|gb|ADA72630.1| putative peptide chain release factor H [Shigella flexneri 2002017]
 gi|313646632|gb|EFS11091.1| putative peptide chain release factor H [Shigella flexneri 2a str.
           2457T]
 gi|332761634|gb|EGJ91914.1| putative peptide chain release factor H [Shigella flexneri 4343-70]
 gi|332761778|gb|EGJ92057.1| putative peptide chain release factor H [Shigella flexneri 2747-71]
 gi|332764451|gb|EGJ94684.1| putative peptide chain release factor H [Shigella flexneri K-671]
 gi|332768583|gb|EGJ98765.1| putative peptide chain release factor H [Shigella flexneri 2930-71]
 gi|333008731|gb|EGK28195.1| putative peptide chain release factor H [Shigella flexneri K-218]
 gi|333009717|gb|EGK29167.1| putative peptide chain release factor H [Shigella flexneri VA-6]
 gi|333010787|gb|EGK30213.1| putative peptide chain release factor H [Shigella flexneri K-272]
 gi|333021285|gb|EGK40538.1| putative peptide chain release factor H [Shigella flexneri K-227]
 gi|333022100|gb|EGK41343.1| putative peptide chain release factor H [Shigella flexneri K-304]
          Length = 131

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 9/138 (6%)

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           +TE     D     ++SA + + G NA+   +   G  + +  SPY  +  R   F  I 
Sbjct: 3   ETETGRYSDT----LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIG 58

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
            +     + + +      R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH
Sbjct: 59  RF-----TADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQH 113

Query: 271 KNKAQAWNMLRAKLYELE 288
            NK  A  ++  KL + +
Sbjct: 114 ANKRLARLLIAWKLDQQQ 131


>gi|221133060|ref|XP_002169670.1| PREDICTED: similar to peptide chain release factor, putative,
           partial [Hydra magnipapillata]
          Length = 171

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 8/171 (4%)

Query: 13  LFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            FD   +  V+R   L          ++  +   L +E   L +    I +++++  +  
Sbjct: 2   SFDNKLNRLVERHIDLRDLLATHD-MKDAKDFAKLSKEYSDLTDIAEAIADLRNKQAEKN 60

Query: 71  ILLELALEED-DCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGA 125
            L  +  +   D  + Q    +   +  E+   + +     L     D  +A LEV AG 
Sbjct: 61  DLAAMLSDSSLDTEMKQLAQSDYDLLLEELPNIEQQIKVLLLPKDADDERNAILEVRAGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           GG E+  +A +L RMY R+A  + ++ E + + D     IK A+  I G  
Sbjct: 121 GGEEAGLFAAVLFRMYQRYAANKGWRFEIIAMSDTGLGAIKEASASISGKG 171


>gi|289807125|ref|ZP_06537754.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 145

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 6/148 (4%)

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAYGWLKGEQGV 187
           E        L   T+ A + K     LE   G      +SA + + G  A  + +   G 
Sbjct: 1   ECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAMAFSERWCGT 60

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
              +  SPY  +  R   +  I  +     S +  I   + R +T R+SG GGQHVN TD
Sbjct: 61  LLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRSSGPGGQHVNKTD 115

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           SAVR TH+ +G+ V+ Q ERSQH NK  
Sbjct: 116 SAVRATHLASGISVKVQSERSQHANKRL 143


>gi|301631891|ref|XP_002945028.1| PREDICTED: hypothetical protein LOC100485311 [Xenopus (Silurana)
           tropicalis]
          Length = 782

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 77/188 (40%), Gaps = 4/188 (2%)

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY-GWLKGEQ 185
             E +    + LR   R A+         +      AG KS  L      A   WL   Q
Sbjct: 591 PAECERAVAITLRALLRDAQAHAIALAVAQEVAT-AAGFKSVLLQGAASAAALQWLATWQ 649

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G  + V  SP+    RR   F  +      +      + +        RASG GGQHVNT
Sbjct: 650 GSVQCVFTSPWRPGHRRKNWFVGVQRCAAPETVA--GLDDGAIVYQACRASGKGGQHVNT 707

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAV   H+ +G+ V+   ERSQH NK  A  ++  +L E +  + E+         T 
Sbjct: 708 TDSAVHALHLASGIAVKVMGERSQHANKRLARALIALRLAERQTAQAEDAGRQRRLQHTA 767

Query: 306 IGWGRQIR 313
           +  GR +R
Sbjct: 768 VQRGRPVR 775


>gi|12329992|emb|CAC24560.1| mitochondrial peptide chain release factor [Platichthys flesus]
          Length = 183

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 64  DRLCDNLILLEL---ALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDA 117
             L +   LL+    A +ED+    +L+E  +++    L +     ++L+     DS++ 
Sbjct: 1   RDLEEVRSLLQGSAGAKDEDEQVMQMLKEEEEHISSKILALREDLIKALVPADPLDSSND 60

Query: 118 YLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            LEV +G   GG   Q +   +  MY  +A  + +  E       +  G+  A + I G 
Sbjct: 61  LLEVVSGRTTGGDICQQFTKEMFDMYQGFAFYKNWDFEVYNYTSADFGGLHHAAVRIAGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           N Y  LK E G HR+ RI     +SR    HT   ++ + P   +  ++ I   D RIDT
Sbjct: 121 NVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPVE-FDVHIDPKDLRIDT 179

Query: 233 YRA 235
           +RA
Sbjct: 180 FRA 182


>gi|226294427|gb|EEH49847.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18]
          Length = 153

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 5/104 (4%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIAN 297
           HVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW +LRA++ +   + RE    ++  
Sbjct: 9   HVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRR 68

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                  ++G G +IR+Y         D R+ +   +  ++++G
Sbjct: 69  GAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLVNIMEG 111


>gi|269119386|ref|YP_003307563.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
 gi|268613264|gb|ACZ07632.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
          Length = 206

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 2/206 (0%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +G G  E +       +   +   K   +   +E   G +A    + +L    N  
Sbjct: 3   MIISSGNGPQECEKAVYEYFKYLKKEFAKYNIEYRYIESEAGNKAKTFRSVVLQIKENT- 61

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            +     G    +  S Y  N RR   +    +    ++ +   IS+    I T R+SG 
Sbjct: 62  KFTNIYTGTILWINESIYRKNHRRKNWYIKSVLIKE-NEFLNKSISKKTTEITTMRSSGN 120

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++AVRI HIPTG+ +  ++ER+Q+ NK  A   L  KL  +E+  ++E    
Sbjct: 121 GGQNVNKLETAVRIKHIPTGISIVSREERTQYANKKAAVKKLEEKLTNMEIYHQKEEEMK 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVK 324
             S K EI  G     +    ++ +K
Sbjct: 181 IWSVKNEIERGNPDLIFEGDKFRRIK 206


>gi|239835036|ref|ZP_04683364.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239823099|gb|EEQ94668.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 136

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 1/130 (0%)

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           + LV  SP     +R   F S+          +I I  +D R +T RA G GGQH NT+D
Sbjct: 8   YLLVFKSPVRPQHKRQHWFISVSRIARPA-INDIVIQPNDVRFETLRAGGPGGQHQNTSD 66

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+ +  + ERSQH+NKA A   L   L  L+  + E    +       I 
Sbjct: 67  SAVRVVHIPTGIQLIARNERSQHRNKATALERLEMVLKHLQEDEIENAEAVRHHENRNIE 126

Query: 308 WGRQIRSYVL 317
            G +++++  
Sbjct: 127 RGNEVKTFRF 136


>gi|167933019|ref|ZP_02520106.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7b]
          Length = 106

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 1/92 (1%)

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITH+PTG+ V  Q ERSQ +NK  A  +LR+KL +++ ++  E  N  
Sbjct: 1   GQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKILRSKLAQIQTEQHAETINDL 60

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
            + +    WG QIR+Y+L PY ++KD RT  E
Sbjct: 61  RAGE-SANWGSQIRNYILHPYTLIKDTRTKYE 91


>gi|213583737|ref|ZP_03365563.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 147

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 6/151 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE   G      +SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I  +     S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGIGRF-----SADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SG GGQHVN TDSAVR TH+ +G+ V+ Q E
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSE 147


>gi|330951102|gb|EGH51362.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 111

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 6/102 (5%)

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV+CQ+ERSQHKN+A+A + L AKL + +         I    K  +G G    
Sbjct: 1   HLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTS--AAANAIASERKLLVGSGDRSE 58

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   V D R N+   S  +VL G +D  ++  LA
Sbjct: 59  RIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 99


>gi|307688011|ref|ZP_07630457.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 80

 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 52/80 (65%), Positives = 63/80 (78%)

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +D YR SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+
Sbjct: 1   MDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEM 60

Query: 290 QKREEIANIGESSKTEIGWG 309
           QK+       E +K++IGWG
Sbjct: 61  QKKNAEKQAMEDNKSDIGWG 80


>gi|71032615|ref|XP_765949.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68352906|gb|EAN33666.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 216

 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 17/166 (10%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV----------YPVVDDSI 219
                         E GVH++ R+   + + R H+S +++ V              +D +
Sbjct: 35  FSPNTEGLEDRFLREGGVHQVKRVPMTEKSGRMHSSTATVAVLPSEMAKGRGTNNFEDVL 94

Query: 220 E-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           E +EI+ SD    T RASG GGQ+VN  ++AV + H PTG+ V+C +ERSQ KNK  A  
Sbjct: 95  EAVEINPSDIEWKTCRASGPGGQNVNKVETAVSLYHKPTGIKVECSEERSQGKNKELALK 154

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY-VLQPYQMV 323
            LR ++  + +   E  +      K+++ +   I++Y  L  Y+++
Sbjct: 155 KLREEIARIRI--EEMFSEARVRRKSQVHF---IQNYSTLHIYKLI 195


>gi|222872913|gb|EEF10044.1| predicted protein [Populus trichocarpa]
          Length = 245

 Score = 95.8 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +KT++GWG QIRS
Sbjct: 1   MPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIRS 60

Query: 315 YVLQPYQMVKDLRTNIEKTSPSD 337
           YVL     +KDLRTN+E ++   
Sbjct: 61  YVL-DNSRIKDLRTNVEISATQK 82


>gi|289178305|gb|ADC85551.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 115

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308
           +THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++     
Sbjct: 1   MTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDR 58

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D RTN +  +   VLDGDL   + + +
Sbjct: 59  SERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDI 100


>gi|298369317|ref|ZP_06980635.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298283320|gb|EFI24807.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 106

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSY 315
           +VV+CQ  RSQH NKAQA  +L A+L + +  KRE  A      K+ IG G +   IR+Y
Sbjct: 1   MVVECQDGRSQHANKAQAMKVLAARLNDAQ--KREAQAKEAAERKSLIGSGDRSECIRTY 58

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              P   V D R N+       V+DGDL++   A +A
Sbjct: 59  NY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 94


>gi|302780523|ref|XP_002972036.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii]
 gi|300160335|gb|EFJ26953.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii]
          Length = 402

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 101/329 (30%), Gaps = 114/329 (34%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   R + L+    +  +  +  E   + ++   LD ++   K ++ +  + + L EL  
Sbjct: 26  SIEDRHACLSKALLETGIASD--ELIKMNKDLCKLDYSVDMFKALKAKEKEVIGLKELVK 83

Query: 78  EE-DDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQD 132
           E  +D  + +  S  LQ    EV   Q E LL      EADS         GAGG E+  
Sbjct: 84  ESVEDEEMRRLASGELQTATREVRDAQDEVLLERIPKDEADSR--------GAGGDEASI 135

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L + Y ++A+                                       G  +   
Sbjct: 136 FASDLFKKYEKYAQ------------------------------------TTHGGLKFSA 159

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           + P                       ++++I   + +IDTYRA GA    +  + +A   
Sbjct: 160 LPP-------------------PTPEVDVDIRNDEIKIDTYRAGGAMLYELERSRTAA-- 198

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
                         RS+ +                                       +I
Sbjct: 199 -------------SRSELQQDQIG----------------------------SSDRLERI 217

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           R+    P   V D R  + + S   +++G
Sbjct: 218 RTCNF-PQDRVTDHRVGVTQHSIEQIMEG 245


>gi|10092253|gb|AAG12666.1|AC027033_1 peptide chain release factor, putative; 62597-62246 [Arabidopsis
           thaliana]
          Length = 88

 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/80 (48%), Positives = 52/80 (65%)

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NKA A  +L++ L +LE+ ++  +      S TEI WG QIR+YVL  Y+MVKDLRTN E
Sbjct: 2   NKASAMAVLQSWLDQLEMARQTSVNAQHTRSLTEISWGNQIRTYVLHQYRMVKDLRTNYE 61

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            + P  VL+GDLD F+   L
Sbjct: 62  VSDPDSVLEGDLDGFISKLL 81


>gi|313622391|gb|EFR92858.1| peptide chain release factor 2 [Listeria innocua FSL J1-023]
          Length = 55

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/53 (58%), Positives = 36/53 (67%)

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 1   EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 53


>gi|226294428|gb|EEH49848.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18]
          Length = 315

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 17/205 (8%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     + L +K  +     N   AK +  E      A+    +  + + +   LLE + 
Sbjct: 112 SIADEHASLTSKLAE-SF--NPKTAKRVG-ELATTATALKEWDKAHESISELNALLEDS- 166

Query: 78  EEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              D  +     ++LQ     +    E  +   +           LE+  GAGG E+  +
Sbjct: 167 -STDSELRSLALEDLQTTMASLSVLSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIF 225

Query: 134 ANMLLRMYTRWAEKRKFKT-------EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           AN LLRMYT +   R  +        E      G E  +  A + I+ P +Y  L+ E G
Sbjct: 226 ANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAG 285

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWV 211
           VHR+ R+   +S  R HTS  S+ +
Sbjct: 286 VHRVQRVPATESKGRTHTSAGSVAI 310


>gi|259418312|ref|ZP_05742230.1| putative peptide chain release factor H [Silicibacter sp.
           TrichCH4B]
 gi|259345707|gb|EEW57551.1| putative peptide chain release factor H [Silicibacter sp.
           TrichCH4B]
          Length = 211

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 7/214 (3%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           S    L + +G G  E +     LL      A +     E        + G  SA +++ 
Sbjct: 2   SEKEALLLSSGNGPGECRQAVGHLLAWLATKAAQYG--VELDIATRDAQHGPSSAVVILS 59

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  A       +GV      S      +R   F  + ++ +   +  + +  +   +   
Sbjct: 60  GTQASALALSVEGVILWRCQSELRPKHKRKNWF--VQIFRLPTTTKVVSVDPASVEMQAI 117

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQC---QQERSQHKNKAQAWNMLRAKLYELELQ 290
           RA G GGQH N T SA+R   +     V     +  RSQH+N+  A   L A     + +
Sbjct: 118 RAGGPGGQHQNKTSSAIRARWVSPHKQVYSVVVRDSRSQHQNRRLALERLAALASAEQAE 177

Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
                     +   ++  G   R +  + ++ VK
Sbjct: 178 AEASRRGETWALHGQLKRGEPHRVFEGRHFKEVK 211


>gi|110224569|emb|CAJ98782.1| peptide release factor protein 2 [Francisella novicida]
 gi|259236249|gb|ACW20342.1| PrfB [Francisella sp. FnSp1]
          Length = 101

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     L++LA  E+D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLQTLTELIDLA--EEDESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|326525162|dbj|BAK07851.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 149

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 2/137 (1%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +   + ++D  I    +    G   N   + VR+ HIP+GV  +   ERS   NK +A 
Sbjct: 13  PVNFHLDDNDLEISPLPSKCENGDRRN--GATVRVQHIPSGVTAESSGERSYFANKLKAV 70

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           + L+AKL  +  + R     + E    E G  R+ R Y L P ++V DL T I+ +  + 
Sbjct: 71  SRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHDLNTGIQLSDLNS 130

Query: 338 VLDGDLDDFMKATLAIK 354
           VL+GD++ F++  +  +
Sbjct: 131 VLEGDIEPFIRGRIVSR 147


>gi|239982310|ref|ZP_04704834.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291454154|ref|ZP_06593544.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357103|gb|EFE84005.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 121

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 2/119 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D     EL
Sbjct: 5   VEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A   DD     E  +     +   E  +   +    +D  D  LE+ AGAGG ES  +A
Sbjct: 65  AA--DDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESALFA 121


>gi|315283645|ref|ZP_07871778.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
 gi|313612712|gb|EFR86721.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
          Length = 70

 Score = 88.1 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/67 (47%), Positives = 41/67 (61%)

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E +++E         + EIGWG QIRSYV  PY MVKD RT+ E  +   V+DGDLDDF+
Sbjct: 2   EQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTSYETGNIQAVMDGDLDDFI 61

Query: 348 KATLAIK 354
            A L  +
Sbjct: 62  NAYLRSR 68


>gi|328852101|gb|EGG01250.1| hypothetical protein MELLADRAFT_92621 [Melampsora larici-populina
           98AG31]
          Length = 174

 Score = 88.1 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 29/190 (15%)

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           +      G++ A L IKG + Y  ++ E GVH +  +    + S  HTS +++ V     
Sbjct: 2   VSGHSMDGLREAPLEIKGEDVYKRMRWEAGVHCVQCVPVMQNTSLVHTSTAAVIVLAFDP 61

Query: 217 DSIEIE----ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
            + + +      + D R +T R+ G GGQHVN T+S VR+TH+P                
Sbjct: 62  GNQDRQEEALFEDKDVRTETMRSQGVGGQHVNKTESVVRLTHVPN--------------W 107

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
            ++ + +LRA L +L   +++++   G      I                V D R  +  
Sbjct: 108 NSRVFMILRAILSDL-RNQQKQVEERGLRLLQLICV----------FQGRVTDHRIGLTL 156

Query: 333 TSPSDVLDGD 342
                V++GD
Sbjct: 157 PRLHYVMEGD 166


>gi|226320894|ref|ZP_03796445.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233666|gb|EEH32396.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 86

 Score = 88.1 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/86 (39%), Positives = 51/86 (59%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +   E DS +  +E+ AG GG E+  +AN L  MY +++EK+K+KTE +  ++ E  G K
Sbjct: 1   MPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVR 192
                IKG + +  LK E GVHR+ R
Sbjct: 61  EIIFEIKGKDVFKKLKYESGVHRVQR 86


>gi|156305180|ref|XP_001617535.1| hypothetical protein NEMVEDRAFT_v1g157388 [Nematostella vectensis]
 gi|156194391|gb|EDO25435.1| predicted protein [Nematostella vectensis]
          Length = 80

 Score = 88.1 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
               LRAKLYE+E+ KR   A   E SK +IGWG QIRSYVL   Q +KDLRT ++ ++ 
Sbjct: 2   CMKQLRAKLYEMEMMKRNAAAQELEDSKADIGWGSQIRSYVLDD-QRIKDLRTGVQTSNC 60

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDG+LD F++A+L  
Sbjct: 61  DRVLDGELDMFIEASLKA 78


>gi|262196479|ref|YP_003267688.1| class I peptide chain release factor [Haliangium ochraceum DSM
           14365]
 gi|262079826|gb|ACY15795.1| Class I peptide chain release factor [Haliangium ochraceum DSM
           14365]
          Length = 196

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 2/183 (1%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           +++  +L             +  A+  H  +E+  +S    + G      L G  G H L
Sbjct: 2   REFVALLAEELQTRCRAAGLRIGAVSTHGNDES-PRSVAFTVSGA-VSAALAGFVGTHVL 59

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           V  S       R   F+ + ++     +   EI   +  +   RA G GGQHVNTTDSAV
Sbjct: 60  VARSSRRGRRARKRWFAGVSIHAQQAATAVAEIRPDEVEVTASRAGGPGGQHVNTTDSAV 119

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+ H  +G+ V+   ERSQH+N++ A   LR  L E E ++R E A     +  ++  G 
Sbjct: 120 RVRHKASGISVRVAGERSQHRNRSVALTRLRELLGEREQRERAERAKRRRRAHYQLERGG 179

Query: 311 QIR 313
            +R
Sbjct: 180 AVR 182


>gi|302823050|ref|XP_002993180.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
 gi|300139071|gb|EFJ05820.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
          Length = 221

 Score = 85.8 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 53/86 (61%)

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +NK +A  +L++KL  +  +++            +  WG++IR+YV  PY++V D
Sbjct: 19  ERSQLENKIKAIALLKSKLLVILEEQKAAEIKEIRGDVVKAEWGQEIRNYVFHPYRLVHD 78

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
           LRTN+E +  S ++DG+++  + A L
Sbjct: 79  LRTNVETSDISGIMDGNVEPLLTAYL 104


>gi|281414236|ref|ZP_06245978.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
          Length = 107

 Score = 85.4 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 44/95 (46%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           + R+ D   ++ELA EED+ S+L + +  L  I+ 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRK 107


>gi|153846265|ref|ZP_01993846.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|149744945|gb|EDM56287.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
          Length = 116

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 5/107 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAY 118
           A E DD  + +   + ++  K  +E      Q   L     D  + Y
Sbjct: 69  AKE-DDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCY 114


>gi|213855686|ref|ZP_03383926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 78

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 1/77 (1%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
              ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +  
Sbjct: 1   MKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQ 59

Query: 337 DVLDGDLDDFMKATLAI 353
            VLDG LD F++A+L  
Sbjct: 60  AVLDGSLDQFIEASLKA 76


>gi|148252694|ref|YP_001237279.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. BTAi1]
 gi|146404867|gb|ABQ33373.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. BTAi1]
          Length = 207

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           ++ +  G  SA +++ GP A    +   QG    V  SP   +  R   F  I   P+  
Sbjct: 42  NEADRLGPASAIVVLDGPLADQIAQRWTQGPLLWVCRSPLRPHHGRKNWFVGIVDLPLPH 101

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
              +  ++ +D R +++RA G GGQH N T+SAVR  H+PTG+    +  RSQH+N+A A
Sbjct: 102 QVPD--LAAADVRCESFRAGGPGGQHQNKTESAVRAIHLPTGLTAIARDGRSQHRNRALA 159

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
              L A L           A +  ++   +  G
Sbjct: 160 LTRLAALLDGRARLAEAGEARLVHAAHDRVQRG 192


>gi|146343293|ref|YP_001208341.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. ORS278]
 gi|146196099|emb|CAL80126.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. ORS278]
          Length = 207

 Score = 83.1 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 4/192 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L + +G G  E +      L      A             D +  G  SA  ++ G  A 
Sbjct: 4   LLLTSGRGPAECRIAVAHALARLADEAAAADCDCAIAP-SDADRHGPASAIAVLDGTGAD 62

Query: 179 GWLKGEQ-GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
              +    G    V  SP   +  R   F  + +  +   +    +S SD R +++RA G
Sbjct: 63  AIAQRWTRGSLLWVCRSPLRPHHGRKNWF--VGIVDLPLPAQLPMLSTSDVRFESFRAGG 120

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQH N T+SAVR  H+P+G+    +  RSQH NKA A   L A L             
Sbjct: 121 PGGQHQNKTESAVRAVHLPSGLTAIARDGRSQHGNKALAIARLAALLDGRARVAEAGEVR 180

Query: 298 IGESSKTEIGWG 309
           + +++   +  G
Sbjct: 181 LVQAAHGRVERG 192


>gi|169840002|ref|ZP_02873190.1| peptide chain release factor 2 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 86

 Score = 83.1 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/85 (49%), Positives = 58/85 (68%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           + E+ I++ D RID YR+ G GGQ VNTTDSAVRITH+PTG+ V  Q ERSQ +NK  A 
Sbjct: 2   TDEVNINDKDLRIDVYRSGGRGGQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETAL 61

Query: 278 NMLRAKLYELELQKREEIANIGESS 302
            +LR+KL +++ ++  E  N   + 
Sbjct: 62  KILRSKLAQIQTEQHAETINDLRAR 86


>gi|259235601|gb|ACW20312.1| peptide release factor protein 2 [Francisella cf. novicida 3523]
          Length = 111

 Score = 82.7 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 2/113 (1%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D +++QE +
Sbjct: 1   LEDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELL--ELAEEDETLMQEIA 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY 
Sbjct: 59  KDTQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYM 111


>gi|293413513|ref|ZP_06656162.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
 gi|291433571|gb|EFF06544.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
          Length = 122

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E+    DT R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL
Sbjct: 24  EAGRYPDTLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKL 83

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            + + +    + +       +I  G   R++    +
Sbjct: 84  EQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 119


>gi|119513510|ref|ZP_01632531.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119461826|gb|EAW42842.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 66

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/57 (56%), Positives = 39/57 (68%)

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  E  WG QIR+YV  PYQMVKDLRTN+E T+ SDV+DGDLD F++A L  +
Sbjct: 1   EIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYLRQE 57


>gi|291533126|emb|CBL06239.1| hypothetical protein MHY_13580 [Megamonas hypermegale ART12/1]
          Length = 121

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 45/93 (48%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ + +E   +   +   K I  +  +  IL E+ +E+ D ++  +  
Sbjct: 1   MGEPTFWDDPDQAQKITQELNGVKAGVDKYKNILHKFEEMQILWEMGMEDKDETVCDDVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ I   +E  + E LLSG+ D+N+A  +  
Sbjct: 61  AEIKEINEAIEQLELELLLSGKYDANNAIFDST 93


>gi|110224565|emb|CAJ98780.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
          Length = 101

 Score = 80.8 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I   L     LLEL  E  D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKE--DESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|71027353|ref|XP_763320.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68350273|gb|EAN31037.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 299

 Score = 80.4 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 19/181 (10%)

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138
             + +   D    ++ ++   Q  SL SG   + +     L+V  G GG ES  +A  L 
Sbjct: 92  RDMNENLRDEFVNLRRKLVDMQ-NSLFSGSLHTLNYHKILLQVLQGVGGEESGKFAAELY 150

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY         K      +  E           +G +     + E GVHR+ R+ P++S
Sbjct: 151 DMYANICNLNNLKHIKHPNNTLEI---------FQGLD---RFRYEFGVHRVQRV-PFNS 197

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
              + +S     V     +  +I I  SD  ++T R+SG+GGQ VN +++AVRITHIPTG
Sbjct: 198 RRIQTSSAVVTVVPHFNVE--DINIKSSDLMVETMRSSGSGGQSVNKSETAVRITHIPTG 255

Query: 259 V 259
           +
Sbjct: 256 I 256


>gi|39943940|ref|XP_361507.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea]
 gi|145014700|gb|EDJ99268.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 195

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 2/156 (1%)

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AG    ++  +      + +    +      S +     +  +F++ W+      S    
Sbjct: 5   AGHMMISIFARCRQVVSFSQSIGALSHHSGRSGWSHPMPQARTFTTSWLPLKQMPSRPKP 64

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
             E++      + SG GGQ +N T+SAV++ HIPTG+VV+CQ+ RS+ +N+  A  +L  
Sbjct: 65  PPETEIEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQLLAT 124

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQ--IRSYV 316
           +L +L    +   A +G     +     +   R Y 
Sbjct: 125 RLDDLNNGDQSRSAIVGAHKVKKRASAAKKSARKYR 160


>gi|195161900|ref|XP_002021796.1| GL26306 [Drosophila persimilis]
 gi|194103596|gb|EDW25639.1| GL26306 [Drosophila persimilis]
          Length = 313

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 6/149 (4%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  ++ +++   ++  +      +E   +ED   +++E ++    +  + E    
Sbjct: 58  RLSQLEGVVNALEQRRVLERNITSAKD-IEQEKDEDMRKLMEEENEVYADLLSKQEQTML 116

Query: 105 ESLLSGEADSNDAYLE--VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + LL+   D     L   V+AGAGG E+  +A  L  MYT + E   ++ E       + 
Sbjct: 117 QELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDI 176

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            G++ A +++ G +A+ WL+ E GVHR+ 
Sbjct: 177 GGLRHANVMVNGADAFHWLRFEAGVHRVQ 205



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 3/73 (4%)

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT- 328
           + +  A   L+A+L + +L+  E       ++ +  +    +IR+Y       V D R  
Sbjct: 205 QTRELALKRLQARLVQQQLESSEASKQATKKAQQGSLNRNEKIRTYNFV-QDRVTDHRIQ 263

Query: 329 NIEKTSPSDVLDG 341
                +    L G
Sbjct: 264 GGTLHNLDGFLKG 276


>gi|146340|gb|AAA23958.1| peptide-chain-release factor 2 [Escherichia coli]
          Length = 72

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG 
Sbjct: 1   KLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGS 59

Query: 343 LDDFMKATLAI 353
           LD F++A+L  
Sbjct: 60  LDQFIEASLKA 70


>gi|302761444|ref|XP_002964144.1| hypothetical protein SELMODRAFT_405853 [Selaginella moellendorffii]
 gi|300167873|gb|EFJ34477.1| hypothetical protein SELMODRAFT_405853 [Selaginella moellendorffii]
          Length = 330

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 49/163 (30%)

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            Q   L SG  D   A + + AGAGGT+ Q                              
Sbjct: 140 AQLIKLFSGTYDKERARITITAGAGGTDVQ------------------------------ 169

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           EA IKSATL I         +GE+G HRLV   P+++ + R TSF+ + V  +++++ EI
Sbjct: 170 EAEIKSATLEID--------RGEKGTHRLVLCVPFNAKALRQTSFAGVEVTALLEEN-EI 220

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           E+           + G GGQ++N  ++AVR+THIPTG+ ++C 
Sbjct: 221 EVE----------SGGKGGQNLNKVETAVRVTHIPTGIALRCS 253


>gi|261885046|ref|ZP_06009085.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 83

 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 2/79 (2%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
              L+++LYE EL K++E  N     K+EIGWG QIRSYVL PYQ VKD R+    +   
Sbjct: 1   MKWLKSRLYEFELMKQQEANNAI--EKSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTD 58

Query: 337 DVLDGDLDDFMKATLAIKK 355
            +LDGD+   +++ L  +K
Sbjct: 59  AILDGDIKKIIESVLISQK 77


>gi|297183730|gb|ADI19854.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_46D07]
          Length = 90

 Score = 77.7 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  Q   L   + DS +A LEV AG GG E+  +A+ L  MY R+A K  +K E +E+ +
Sbjct: 25  DALQLLLLPKDKDDSRNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWKFEVMEVSE 84

Query: 160 GEEA 163
               
Sbjct: 85  TGIG 88


>gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex
           echinatior]
          Length = 163

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 5/147 (3%)

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S    +K PN+  +L        L  +   +S   R+ SF     Y  V    EI++ E 
Sbjct: 5   SVLTCLKVPNSIFFLVSRNEFLLLGIVFNSESIQVRNKSFKRYLDYSNVPKLDEIDLEEQ 64

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
             R      SG GGQ  N T++AV + H PTG+VV+C + RSQ  NK +A  +L  KL  
Sbjct: 65  FIR-----GSGPGGQATNKTNNAVLLKHKPTGLVVKCHETRSQWDNKKRAREILVTKLDN 119

Query: 287 LELQKREEIANIGESSKTEIGWGRQIR 313
           L  ++R   A I    K E       R
Sbjct: 120 LLNKERSIEAQIHALEKKEQARKEYKR 146


>gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818]
 gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97]
          Length = 191

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 43/74 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ES+      + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +N+  A  +L  
Sbjct: 49  IDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAE 108

Query: 283 KLYELELQKREEIA 296
           K+  LE  ++   A
Sbjct: 109 KIELLEKGEQSRAA 122


>gi|149626821|ref|XP_001515177.1| PREDICTED: similar to peptide chain release factor 1, putative,
           partial [Ornithorhynchus anatinus]
          Length = 612

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 21/172 (12%)

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +AN L  MY  +       T        +         L    NA  +L  E GV
Sbjct: 107 AEAAYFANELFEMYKNFC----HSTNIQNTQINQN--TLEIFDLGFSQNA-KYLLYEFGV 159

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPV----------VDDSIEI--EISESDCRIDTYRA 235
           HR+ RI    +++R  TS + + V P             DS  I      SD  ++T R+
Sbjct: 160 HRVQRIPK--NSNRIQTSTAVVTVVPTGWSSCHGGRGSKDSPHIGDSFKPSDVIMETMRS 217

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            GAGGQ VN +++AVR+TH+PTG+ V CQ   SQ  NK+ A   ++    ++
Sbjct: 218 RGAGGQSVNKSETAVRVTHVPTGMSVSCQDTSSQIDNKSLALGKVKGMSLDM 269


>gi|39996074|ref|NP_952025.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982839|gb|AAR34298.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens
           PCA]
 gi|298505090|gb|ADI83813.1| hydrolase, putative [Geobacter sulfurreducens KN400]
          Length = 107

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/76 (50%), Positives = 55/76 (72%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I ++D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+ +A   L
Sbjct: 3   VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62

Query: 281 RAKLYELELQKREEIA 296
           R  L + E + ++ IA
Sbjct: 63  RIALEKRERKAKKRIA 78


>gi|118581948|ref|YP_903198.1| class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
 gi|118504658|gb|ABL01141.1| Class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
          Length = 109

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/91 (47%), Positives = 55/91 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E D RI+ YRASG GGQH NTTDSAVRI H+PTG+V Q  + RSQ +N+ +A   L
Sbjct: 5   VEIREEDIRIEYYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQSRNRERAMERL 64

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQ 311
            A L + E   ++ IA        E   G +
Sbjct: 65  TAALEKRERVVKKRIATRVPRGAREKRLGDK 95


>gi|255945923|ref|XP_002563729.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588464|emb|CAP86573.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 186

 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/83 (40%), Positives = 50/83 (60%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS   + P       ++IS++D  I   + +G GGQ +N T+SAV+I H P+GVVV+CQ 
Sbjct: 21  FSQTPIVPAKPLPPRLKISDADISISYLKGTGPGGQKINKTNSAVQIIHKPSGVVVKCQA 80

Query: 266 ERSQHKNKAQAWNMLRAKLYELE 288
            RSQ +N   A ++L  K+  LE
Sbjct: 81  TRSQSQNAKIARSLLADKIEALE 103


>gi|110224725|emb|CAJ98860.1| peptide release factor protein 2 [Francisella philomiragia]
 gi|110224727|emb|CAJ98861.1| peptide release factor protein 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 101

 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L R++  L+N +   + I + L     LL   L E+D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELL--ELAEEDESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWA 101


>gi|84999208|ref|XP_954325.1| peptide chain release factor 1, mitochondrial precursor [Theileria
           annulata]
 gi|65305323|emb|CAI73648.1| peptide chain release factor 1, mitochondrial precursor, putative
           [Theileria annulata]
          Length = 194

 Score = 73.1 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 11/104 (10%)

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEI 223
                    E GVH++ R+   + + R H+S +++ V P                 E+E+
Sbjct: 67  EGLEDRFLREGGVHQVKRVPITEKSGRMHSSTATVAVLPSDMVKGNDMNNFDKLVEEVEL 126

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           + SD    T RASG GGQ+VN  +++V + H PTG+ ++C +ER
Sbjct: 127 NPSDIEWKTCRASGPGGQNVNKVETSVSLYHKPTGIKIECSEER 170


>gi|189426554|ref|YP_001953731.1| class I peptide chain release factor [Geobacter lovleyi SZ]
 gi|189422813|gb|ACD97211.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
          Length = 107

 Score = 73.1 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/78 (50%), Positives = 54/78 (69%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + IEI+E+D R++ YRASG GGQH NTTDSAVRI H+PTG+VV   + RSQ +N+  A  
Sbjct: 1   MSIEINETDIRVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVHAAENRSQLRNREVAME 60

Query: 279 MLRAKLYELELQKREEIA 296
            LR  L +    +++ +A
Sbjct: 61  RLRLALEKRNRVEKKRMA 78


>gi|12322377|gb|AAG51209.1|AC051630_6 peptide chain release factor, putative; 8726-9996 [Arabidopsis
           thaliana]
          Length = 255

 Score = 73.1 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E     CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR
Sbjct: 92  EELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLR 151

Query: 282 AKLYELELQKREEIANIGESSKTEI---------GWGRQI 312
             L      K +  A        +I           G QI
Sbjct: 152 TLLAIKVRNKVDIEAYAPPPELLQILPPKSTIRTSSGSQI 191


>gi|30692851|ref|NP_174601.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|12322576|gb|AAG51290.1|AC027035_13 unknown protein [Arabidopsis thaliana]
 gi|26450075|dbj|BAC42157.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|29824307|gb|AAP04114.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|332193463|gb|AEE31584.1| Class I peptide chain release factor [Arabidopsis thaliana]
          Length = 257

 Score = 73.1 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E     CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR
Sbjct: 92  EELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLR 151

Query: 282 AKLYELELQKREEIANIGESSKTEI---------GWGRQI 312
             L      K +  A        +I           G QI
Sbjct: 152 TLLAIKVRNKVDIEAYAPPPELLQILPPKSTIRTSSGSQI 191


>gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
 gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
          Length = 192

 Score = 72.7 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 43/74 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I +S+      + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +N+  A  +L  
Sbjct: 49  IDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAE 108

Query: 283 KLYELELQKREEIA 296
           K+  LE  ++   A
Sbjct: 109 KIELLEKGEQSRAA 122


>gi|297851766|ref|XP_002893764.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339606|gb|EFH70023.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 256

 Score = 72.7 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR  L
Sbjct: 94  MKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 153

Query: 285 YELELQKREEIANIGESSKTEI---------GWGRQI 312
                 K +  A        +I           G QI
Sbjct: 154 AIKVRNKVDLEAYAPPPELLQILPPKSTIRTSSGSQI 190


>gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC
           18224]
 gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC
           18224]
          Length = 177

 Score = 72.7 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K    ++   R       S    SFS+     V       ++ + D      + +G G
Sbjct: 5   WSKAPNAIYTACR-------STNRPSFSTCPALAVKQLPPRPKLDDKDITGSYLKGTGPG 57

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK--REEIAN 297
           GQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L AK+  LE  +  RE I N
Sbjct: 58  GQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKIAKEILAAKVEVLEKGEQSREAIKN 117

Query: 298 IGESSKTEIGWGRQIRSYV 316
             +  +      ++ R Y 
Sbjct: 118 ALKKKRKASSMKKKRRKYR 136


>gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
 gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
          Length = 125

 Score = 72.7 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I   D      + SG GGQ VN + + V + H PTG+V++C Q RSQ+ N+  A  +L+
Sbjct: 20  QIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPTGIVIKCHQSRSQYHNRIIARQLLK 79

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            K+ E                +       +IRS
Sbjct: 80  DKI-EASQNCSNNSQEKKFLKQKRKKMTSKIRS 111


>gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia
           clavigera kw1407]
          Length = 149

 Score = 72.7 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E +      + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L A+L
Sbjct: 52  EDEIEEMFVKGTGPGGQKINKTNSAVQLIHRPTGIVVKSQATRSRSQNRTIARQVLAARL 111

Query: 285 YELELQKREEIANIGESSKTEIGWGRQI--RSYV 316
            EL    +   A + +S + +     +   R Y 
Sbjct: 112 DELHNGSQSRTAIVADSKRRKKASASKKSRRKYR 145


>gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03]
          Length = 247

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 8/147 (5%)

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRH------TSFSSIWVYPVVDDSIEIEISESDCRI 230
           AY    G         I    +             FS      V       +++ ++   
Sbjct: 64  AYDIPSGLTMFLLRAGIPLRRTKQPWQQVNYSVRFFSHCHQLSVKQMPPRPKLNPAEVTG 123

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
              + SG GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+      
Sbjct: 124 TYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELHLKG 183

Query: 291 KREEIANIGESSKTEIGWGRQI--RSY 315
            +   A + E+ K       +   R Y
Sbjct: 184 DKSRAAIVAETKKKRKARSVKKARRKY 210


>gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis
           Pb18]
          Length = 177

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 2/138 (1%)

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
                 G+       P+         FS      V       +++ ++      + SG G
Sbjct: 1   MFLLRAGIPLRRTKQPWQQVHYSVRFFSHCHQLSVKQMPPRPKLNPAEVTGTYLKGSGPG 60

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+       +   A + 
Sbjct: 61  GQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVA 120

Query: 300 ESSKTEIGWGRQI--RSY 315
           E+ K       +   R Y
Sbjct: 121 ETKKKRKARSVKKARRKY 138


>gi|224127830|ref|XP_002329188.1| predicted protein [Populus trichocarpa]
 gi|222870969|gb|EEF08100.1| predicted protein [Populus trichocarpa]
          Length = 257

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/60 (51%), Positives = 42/60 (70%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              C +DT++ASG GGQH N  +SAVR+ H+PTG++ Q  ++RSQH N+A A   LRA L
Sbjct: 99  MRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHMNRASALKRLRALL 158


>gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
 gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
          Length = 190

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 43/74 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I +S+      + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +N+  A  +L  
Sbjct: 49  IDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAE 108

Query: 283 KLYELELQKREEIA 296
           K+  LE  ++   A
Sbjct: 109 KIELLEKGEQSRAA 122


>gi|148264585|ref|YP_001231291.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
 gi|146398085|gb|ABQ26718.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
          Length = 108

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/85 (48%), Positives = 57/85 (67%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI ESD +I+ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+  A + L
Sbjct: 3   MEIKESDIKIEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREVAMHRL 62

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
           +  L + E + ++ +A+       E
Sbjct: 63  QEALLKRERKVKKRVASRVPRKAKE 87


>gi|110224561|emb|CAJ98778.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis]
 gi|110224571|emb|CAJ98783.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis ATCC 6223]
 gi|110224573|emb|CAJ98784.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis]
 gi|110224575|emb|CAJ98785.1| peptide release factor protein 2 [Francisella novicida]
          Length = 101

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|110224557|emb|CAJ98776.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
 gi|110224559|emb|CAJ98777.1| peptide release factor protein 2 [Francisella novicida]
 gi|110224563|emb|CAJ98779.1| peptide release factor protein 2 [Francisella novicida]
 gi|110224587|emb|CAJ98791.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
          Length = 101

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELAEEDESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 59  TQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|294658124|ref|XP_460455.2| DEHA2F02090p [Debaryomyces hansenii CBS767]
 gi|202952893|emb|CAG88762.2| DEHA2F02090p [Debaryomyces hansenii]
          Length = 180

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +E EI E+  +       G GGQ +N ++S V++TH PTG+VV CQ  RSQ +N+ +A  
Sbjct: 39  VEEEIDEAFLK----GGRGPGGQKINKSNSKVQLTHKPTGLVVTCQYSRSQEQNRKRARE 94

Query: 279 MLRAKLYELE 288
           +L  KL EL+
Sbjct: 95  ILALKLDELQ 104


>gi|222056398|ref|YP_002538760.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
 gi|221565687|gb|ACM21659.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
          Length = 108

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/105 (40%), Positives = 63/105 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E+D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+  A + L
Sbjct: 3   MEIKETDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQAAENRSQWQNRELAMSRL 62

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +  L + E + ++ IA        E     +      +  ++V+D
Sbjct: 63  QQALIKRERKTKKRIATKTPKKAKERRLSEKKIVSRRKKERVVRD 107


>gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii]
          Length = 160

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +  +     S+S +         + +EI+E +      R SG GGQ  N T + V + HI
Sbjct: 24  FRRSQFPQYSYSFVRWKRDNISKLLVEINEDELDEQFVRGSGPGGQATNKTSNCVVLKHI 83

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTEIGWGRQI 312
           P+G+ V+C Q RSQ KN+  +  +LR KL   Y+ +           E  + E     ++
Sbjct: 84  PSGITVKCHQTRSQSKNRELSRRILREKLDVFYKGDESIIVIEKKKEEKRRQEKKRKSKV 143

Query: 313 RSYVLQPYQ 321
           R   L+ ++
Sbjct: 144 RLEKLKAFK 152


>gi|168701291|ref|ZP_02733568.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 185

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/60 (53%), Positives = 41/60 (68%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             C +DTYRASG GGQ  N T SAVR+ H PTG++V  ++ RSQH+NKA+A   L   L+
Sbjct: 26  RQCEVDTYRASGPGGQKRNKTSSAVRLRHAPTGLIVIAEESRSQHENKAKALKRLWHALF 85


>gi|253730877|ref|ZP_04865042.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725386|gb|EES94115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 59

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 2   KAMEGNKSDIGWGNQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 57


>gi|116878616|ref|YP_357940.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
 gi|114843252|gb|ABA89770.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
          Length = 138

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 52/107 (48%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           +  +S   S  +R  S  +    P    +  + I++ D  I  ++A G GGQH N T++A
Sbjct: 1   MTHMSVLRSIDKRKISTMAGLKRPAPSRNGVMTINKQDLDITFFKAGGPGGQHRNKTETA 60

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           VRI H P+G+ V   + RS+  N   A   L  +L  +  + R  IA
Sbjct: 61  VRIHHRPSGITVTASERRSRQANIEHALERLAQRLEAMRRKPRRRIA 107


>gi|224071118|ref|XP_002189696.1| PREDICTED: similar to CL065 protein [Taeniopygia guttata]
          Length = 228

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/85 (35%), Positives = 49/85 (57%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EISE+D      R  G GGQ  N T++ V + HIP+G+VV+C Q RS  KN+  A  +L
Sbjct: 117 LEISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSLEKNRKIAREIL 176

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
           + K+Y     +  ++    ++S+ +
Sbjct: 177 QEKVYLFYKGEDSDVFKEKKASEKQ 201


>gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 156

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 48/100 (48%)

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +     R   F  ++            ++E D      R SG GGQ  N T + V + HI
Sbjct: 27  FQLLRVRPPGFLCVFAAGKKGLIDPPVLNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHI 86

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           P+G+VV+C Q RS   N+ +A +++R KL  L+  +  EI
Sbjct: 87  PSGIVVKCHQTRSVDINRKRARDIMREKLDVLQKGELSEI 126


>gi|302800437|ref|XP_002981976.1| hypothetical protein SELMODRAFT_421349 [Selaginella moellendorffii]
 gi|300150418|gb|EFJ17069.1| hypothetical protein SELMODRAFT_421349 [Selaginella moellendorffii]
          Length = 208

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 16/159 (10%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW-ANMLL---RMYTR-WAEKRKFKTEA 154
              +   LLSG +D   A + + A AGGT++Q      +    R  +R W     ++   
Sbjct: 54  HSFELIKLLSGTSDKEGARIIITADAGGTDAQVTSCADIFFEGRALSRLW-----WRVLL 108

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +          +S      G          +          ++S   R  SF+ + V P+
Sbjct: 109 VRKLGSNRPHSRS-----TGDMRMVISPERKARTGWYCACLFNSKGLRQMSFAGVEVMPL 163

Query: 215 VDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +++S IE+E+ + D  I T R+ G GGQ+V   ++AVR+
Sbjct: 164 LEESEIEVELPDGDLEITTRRSGGKGGQNVKKVETAVRV 202


>gi|213616409|ref|ZP_03372235.1| hypothetical protein SentesTyp_18844 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 65

 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A
Sbjct: 1   QKKNAEKQAMEDTKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEA 59

Query: 350 TLAI 353
           +L  
Sbjct: 60  SLKA 63


>gi|253700800|ref|YP_003021989.1| class I peptide chain release factor [Geobacter sp. M21]
 gi|251775650|gb|ACT18231.1| Class I peptide chain release factor [Geobacter sp. M21]
          Length = 105

 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 52/85 (61%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q  + RSQ +N+ +A   L
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
              L   E + ++ +A        E
Sbjct: 61  AELLRRREQKAKKRVATKVPRRAKE 85


>gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta]
          Length = 220

 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 5/118 (4%)

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           Y++   R+ SF     Y  V      +++E+D      R SG GGQ  N T++AV + H 
Sbjct: 91  YENIQVRNKSFKHYLDYSNVP-----KLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHK 145

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           PTG +V+C + RSQ  NK +A  +L  KL  L  ++R   A I    + +       R
Sbjct: 146 PTGFIVKCHETRSQWDNKKRAREILITKLDNLLNKERSIEAQIRALEEKQQTRKEYKR 203


>gi|302786792|ref|XP_002975167.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
 gi|300157326|gb|EFJ23952.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
          Length = 411

 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 44/59 (74%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q  ++RSQH+N+  A   LR  +
Sbjct: 47  AQCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRESAVQRLRHTI 105


>gi|197118419|ref|YP_002138846.1| hydrolase [Geobacter bemidjiensis Bem]
 gi|197087779|gb|ACH39050.1| hydrolase, putative [Geobacter bemidjiensis Bem]
          Length = 105

 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 52/85 (61%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q  + RSQ +N+ +A   L
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
              L   E + ++ +A        E
Sbjct: 61  AELLRRREQKAKKRVATKVPRRAKE 85


>gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980]
 gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 201

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 43/74 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I E++        SG GGQ +N T SAV++ HIPTG+V++ Q  RS+ +N+  A  ML  
Sbjct: 59  IDEAEFTEVFLHGSGPGGQKINKTSSAVQLKHIPTGMVLKVQATRSRTQNRKIARQMLAE 118

Query: 283 KLYELELQKREEIA 296
           ++  LE  K   +A
Sbjct: 119 RVELLEKGKESRVA 132


>gi|294671261|ref|ZP_06736114.1| hypothetical protein NEIELOOT_02971 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307089|gb|EFE48332.1| hypothetical protein NEIELOOT_02971 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 178

 Score = 70.0 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 15/157 (9%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L+     AE R  K E       ++ GI SA L+++G  
Sbjct: 2   IYLQISTAQGPAECRIFARFVLKKLLAEAEARNVKAEIAGET-ADKHGILSAVLILEGAA 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + V  SP      R   +  I+  P              CR+    +S
Sbjct: 61  ADTLAQSWQGTLQWVCASPVRPKHPRKNWYIGIFRLPENP----------KCRLKAKSSS 110

Query: 237 GAGGQHVNTTDSAV----RITHIPTGVVVQCQQERSQ 269
               +      +++    R  H  +    +   +R+Q
Sbjct: 111 KPAARAAKAGSTSINRVGRPRHTQSQRYFRAGGKRTQ 147


>gi|37523609|ref|NP_926986.1| hypothetical protein glr4040 [Gloeobacter violaceus PCC 7421]
 gi|35214614|dbj|BAC91981.1| glr4040 [Gloeobacter violaceus PCC 7421]
          Length = 125

 Score = 70.0 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 48/74 (64%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            ++ E  E DC ++   ASG GGQH N T+S VR+TH P+GVVV   + RSQH+N+  A+
Sbjct: 15  PLDREALERDCTLEFVIASGPGGQHRNKTESGVRLTHRPSGVVVSATERRSQHQNREVAF 74

Query: 278 NMLRAKLYELELQK 291
             + AKL +L+  +
Sbjct: 75  ERMAAKLADLQRVR 88


>gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
           1]
 gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
           1]
          Length = 203

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 50/91 (54%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS     P       ++I+++D  I   + +G GGQ +N T+SAV++ H PTG+VV+ Q 
Sbjct: 29  FSLTPYLPEKQLPPRLKINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQA 88

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
            RS+ +N+  A  +L  K+ EL+       A
Sbjct: 89  TRSRSQNEKIARQILADKVEELQKGDESRRA 119


>gi|194697006|gb|ACF82587.1| unknown [Zea mays]
          Length = 95

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)

Query: 272 NKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
           NKA+A  +LRA+LYELE ++   + + +            +IR+Y   P   V D R  +
Sbjct: 2   NKAKALKVLRARLYELERRRLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGV 60

Query: 331 EKTSPSDVLDGD-LDDFMKATLAIK 354
              S +DV++G+ LD F+ A L  +
Sbjct: 61  THHSIADVMEGESLDMFVDALLLQE 85


>gi|302791615|ref|XP_002977574.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
 gi|300154944|gb|EFJ21578.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
          Length = 207

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 44/59 (74%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q  ++RSQH+N+  A   LR  +
Sbjct: 47  AQCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRDSAVQRLRHTI 105


>gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
           10500]
 gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
           10500]
          Length = 174

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + + D      + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L A
Sbjct: 43  LDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKIAREILAA 102

Query: 283 KLYELELQK--REEIANIGESSKTEIGWGRQIRSYV 316
           K+ ELE  +  RE I N  +  +      ++ R Y 
Sbjct: 103 KVEELEKGEQSREAIKNALKRKRKASSMKKKRRKYR 138


>gi|145629735|ref|ZP_01785531.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
 gi|144978072|gb|EDJ87851.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
          Length = 102

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTN 329
           KNKA+A ++L +++ + E +++         +    G    +IR+Y   P   V D R N
Sbjct: 7   KNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRIN 65

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           +      +V++G +D+ ++  + 
Sbjct: 66  LTIYRLDEVINGKIDELIQPIIT 88


>gi|110224567|emb|CAJ98781.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224577|emb|CAJ98786.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224579|emb|CAJ98787.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224581|emb|CAJ98788.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224583|emb|CAJ98789.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224585|emb|CAJ98790.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
          Length = 101

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE + +
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLMQEIAKD 58

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            Q +  E+E  +F  + SG+ D+N A+L++ +G+GGTE+QDWA
Sbjct: 59  TQNVASEIEKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWA 101


>gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar]
          Length = 166

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 6/120 (5%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
            P+   +    S + +      D      ++E +      R SG GGQ  N T + V + 
Sbjct: 25  PPF---TVPPVSLAHVQSNGKKDYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLR 81

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VV+C Q RS   N+ +A  ++R KL   E+  + E ++I ++ K  I   +  R
Sbjct: 82  HIPTGIVVKCHQTRSVETNRKRARRIMREKL---EVTYKGEESDILKNKKESIQRKQDKR 138


>gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis
           Pb01]
 gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis
           Pb01]
          Length = 175

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 2/123 (1%)

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+   +     FS      V       +++ ++      + SG GGQ +N T+SAV++ H
Sbjct: 16  PWQQVNFSVRFFSHCHQLSVKQMPPRPKLNPAEITGTYLKGSGPGGQAINKTNSAVQLIH 75

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI-- 312
            PTG+VV+ Q  RS+ +N+  A  +L  K+       +   A + E+ K       +   
Sbjct: 76  KPTGIVVKSQATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVAETKKKRKARSVKKAR 135

Query: 313 RSY 315
           R Y
Sbjct: 136 RKY 138


>gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 172

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDT-YRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           T   SI     +    +  I+E +      +  SG GGQ +N T+S V++TH PTG+VV 
Sbjct: 13  TRALSIPKKNQLPPRPKWLINEDELEEKFLHGGSGPGGQKINKTNSKVQLTHKPTGIVVS 72

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELE 288
           CQ+ RSQ +N+ +A  +L  KL +++
Sbjct: 73  CQESRSQDQNRKKAREILALKLEDIQ 98


>gi|207111206|ref|ZP_03245368.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 55

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 2   KKDEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 54


>gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 142

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 53/110 (48%)

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
             S+S R + F+       +D S    + + D      R SG GGQ V  T++ V +TH 
Sbjct: 6   TISSSVRQSIFAITRFKTTIDVSKVPVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHK 65

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           PTG+V+QC   RS  KN+ +A  +L  KL ELE   +   A   +    +
Sbjct: 66  PTGIVIQCHSSRSLFKNREEARRLLILKLDELENGDQSVEAQRQKIEAKK 115


>gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 162

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 7/130 (5%)

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
               I  +D+      +  ++   P      E EI+ S  +      SG GGQ +N T S
Sbjct: 13  SRCFIPHFDTRLFSTFAALNVKQMPARPTIDESEITGSYLK-----GSGPGGQKINKTSS 67

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AV++ H+PT  VV+ Q  RS+ +N+  A  +L  K+  L+   +   A + ++ +     
Sbjct: 68  AVQLIHLPTNTVVKSQATRSRSQNRKIALQILAEKVELLQKGGQSRAAIVAQTKQKRKAS 127

Query: 309 GRQ--IRSYV 316
             +   R Y 
Sbjct: 128 KTKKSKRKYR 137


>gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+]
          Length = 187

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/88 (34%), Positives = 49/88 (55%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            ES+      + SG GGQ +N T+SAV+I H+PT +V++CQ  RS+ +N+  A ++L  +
Sbjct: 9   PESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTNIVIKCQATRSRSQNRKIARDILAER 68

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQ 311
           L EL    +  +A +G   K       +
Sbjct: 69  LDELYNGSQSRVAIVGSVKKKRADSAAK 96


>gi|238494178|ref|XP_002378325.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
           NRRL3357]
 gi|317148917|ref|XP_003190253.1| peptidyl-tRNA hydrolase domain protein [Aspergillus oryzae RIB40]
 gi|220694975|gb|EED51318.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
           NRRL3357]
          Length = 176

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 48/81 (59%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +++ ++D  I   + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L
Sbjct: 39  LKLHDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQNEKIARQLL 98

Query: 281 RAKLYELELQKREEIANIGES 301
             K+ +LE   +   A   + 
Sbjct: 99  ADKVEQLEKGDQSRAAIKADR 119


>gi|298249625|ref|ZP_06973429.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
 gi|297547629|gb|EFH81496.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
          Length = 118

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 42/72 (58%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            I+ +  E DC I+ + A G GGQH N  +S VR+ H P+G VV   + RSQ+ N+  A+
Sbjct: 7   PIDRDSLERDCTIEFFIAGGPGGQHRNKVESGVRLIHRPSGQVVTATERRSQYANREMAF 66

Query: 278 NMLRAKLYELEL 289
             + A+L  L+ 
Sbjct: 67  ERMAARLERLQH 78


>gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
 gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
          Length = 257

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 40/66 (60%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T + V++ H PTG+ V CQ+ RS  +N+ +A  ++ 
Sbjct: 152 ELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPTGIRVVCQETRSLEQNRKRARKIMI 211

Query: 282 AKLYEL 287
           AKL +L
Sbjct: 212 AKLDQL 217


>gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae]
          Length = 138

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 44/91 (48%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++E D      + SG GGQ V+ T S + + HIPTG+VV+CQ+ RS  +NK  A   L  
Sbjct: 31  LNEQDLEEKQVKGSGPGGQKVSKTSSCIVLKHIPTGIVVKCQETRSVLQNKKIARLHLIT 90

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIR 313
           KL      +    A I      + G   Q R
Sbjct: 91  KLDNTINGENSVEAQIKRLENKKRGCNEQKR 121


>gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae
           ARSEF 23]
          Length = 182

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 50/107 (46%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
             RI      +     F+   +             +++      + SG GGQ +N T+SA
Sbjct: 7   PRRIPRTHPLAALSRPFTLTALRSKNLPPRPKPPPDAEIEESFLKGSGPGGQKINKTNSA 66

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           V++ H+PTG+VV+ Q  RS+ +N+  A  +L  K+ +L   ++   +
Sbjct: 67  VQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDDLLHGEQSRSS 113


>gi|51038077|gb|AAT93880.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 481

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 38/94 (40%), Gaps = 1/94 (1%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNL 92
           +LW N  ++   +         +  +K+++ +  +  ++ +L+  +  +  + ++     
Sbjct: 95  NLWDNPAKSHETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTS 154

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                 ++  Q   LL G  D   A + V AG+ 
Sbjct: 155 VDATEFLDRYQMYKLLKGPYDKEGACIIVTAGSD 188



 Score = 52.7 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            + + + E+D  I    +      H N   SA+R+ HI TGV  +   ERS   NK +A 
Sbjct: 191 PVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAI 247

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           + L+AKL  +  + R       +    E  + R+ RS
Sbjct: 248 SRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRS 284


>gi|78222830|ref|YP_384577.1| class I peptide chain release factor [Geobacter metallireducens
           GS-15]
 gi|78194085|gb|ABB31852.1| Class I peptide chain release factor [Geobacter metallireducens
           GS-15]
          Length = 107

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 54/94 (57%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           IEI+E+D + + YR SG GGQH N T+S VRI H+PTGVVVQ  + RSQ +N+  A   L
Sbjct: 2   IEINEADLKFEFYRGSGPGGQHRNVTESGVRIRHVPTGVVVQACESRSQARNREIALERL 61

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           R  L   E + ++ +A      + E     + R 
Sbjct: 62  RQILERRERRVKKRVATTVPRGQKEKRIEEKKRR 95


>gi|149197233|ref|ZP_01874285.1| putative peptide chain release factor 2 [Lentisphaera araneosa
           HTCC2155]
 gi|149139779|gb|EDM28180.1| putative peptide chain release factor 2 [Lentisphaera araneosa
           HTCC2155]
          Length = 125

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 5/108 (4%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E E    +C+   +RASGAGGQHVNTTDSAVR+ H PTG+VVQ  + RSQH+N+      
Sbjct: 17  EDEALFRECQFSAFRASGAGGQHVNTTDSAVRLVHFPTGLVVQSSESRSQHRNREICLKK 76

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           LR  L     ++++ +A   + S        + R Y     Q  ++ R
Sbjct: 77  LRQSLVMAGRKRKKRVATRKKRSV-----SVRERKYREVQKQKKQNRR 119


>gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
          Length = 193

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 43/72 (59%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +S+      + SG GGQ +N T SAV++ HIPTGVVV+ Q  RS+ +N+  A  +L  KL
Sbjct: 50  DSEIEESYLKGSGPGGQKINKTSSAVQLKHIPTGVVVKSQATRSRTQNRKIAREILAQKL 109

Query: 285 YELELQKREEIA 296
            +L+   +   A
Sbjct: 110 DDLQNGDQSRSA 121


>gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
           77-13-4]
 gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
           77-13-4]
          Length = 186

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)

Query: 191 VRISPYDSNSRRHTSFSSIWVY---PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
             +SP+ S  R  T  S+       P      E EI ES  +      SG GGQ +N T+
Sbjct: 13  AALSPFGSPVRTFTIISTQLAKALPPRPKPPPEFEIEESYVK-----GSGPGGQKINKTN 67

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           SAV++ HIPTG+VV+ Q  RS+ +N+  A  +L  ++ E     +   A
Sbjct: 68  SAVQLKHIPTGIVVKSQATRSRDQNRKHARELLAQRVDEFHNGDQSRSA 116


>gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1]
          Length = 189

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 189 RLVRISPYDSNSRRHTSFSSIWVY-PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
               I+P    +    +FSS  +Y             ES+      + SG GGQ +N T+
Sbjct: 7   SFRLIAPRSPFASPTCTFSSTSIYLAKALPPRPKPPPESEIEESYVKGSGPGGQKINKTN 66

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           SAV++ H+PTG+VV+ Q  RS+ +N+  A  +L  ++ EL    +   A
Sbjct: 67  SAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRVDELRNGDQSRSA 115


>gi|88607060|ref|YP_505064.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598123|gb|ABD43593.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 72

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           Y + PY+MVKDLRT  E  +   V++GDLD F+ A L 
Sbjct: 23  YKMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 60


>gi|207093409|ref|ZP_03241196.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 111

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 49/99 (49%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           +D L +++ L ELA  ++D   L    +    ++  V+ 
Sbjct: 73  KDSLDESVELFELAQNDNDEITLSLLYEEAPILEHSVQK 111


>gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str.
           Silveira]
          Length = 172

 Score = 67.7 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 44/83 (53%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ES+      + SG GGQ +N T SAV++ H+PT  VV+ Q  RS+ +N+  A  +L  
Sbjct: 43  IDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIALQILAE 102

Query: 283 KLYELELQKREEIANIGESSKTE 305
           K+  L+       A + E+ +  
Sbjct: 103 KVELLQKGDESRAAIVAETKRKR 125


>gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
 gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
          Length = 180

 Score = 67.7 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E EI E   +       G GGQ +N ++S V++TH PTG+VV CQ  RSQ +N+ +A  +
Sbjct: 51  EEEIDEEFLK----GGRGPGGQKINKSNSKVQLTHKPTGIVVTCQYSRSQEQNRKKAREI 106

Query: 280 LRAKLYELELQKREEIA 296
           L  KL EL+  +    A
Sbjct: 107 LALKLEELQDPENSRTA 123


>gi|218196674|gb|EEC79101.1| hypothetical protein OsI_19733 [Oryza sativa Indica Group]
 gi|222631380|gb|EEE63512.1| hypothetical protein OsJ_18328 [Oryza sativa Japonica Group]
          Length = 195

 Score = 67.7 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 41/99 (41%), Gaps = 1/99 (1%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNL 92
           +LW N  ++   +         +  +K+++ +  +  ++ +L+  +  +  + ++     
Sbjct: 95  NLWDNPAKSHETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTS 154

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                 ++  Q   LL G  D   A + V AG+ G  S+
Sbjct: 155 VDATEFLDRYQMYKLLKGPYDKEGACIIVTAGSDGAASE 193


>gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti]
 gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti]
 gi|108869799|gb|EAT34024.1| conserved hypothetical protein [Aedes aegypti]
 gi|108871632|gb|EAT35857.1| conserved hypothetical protein [Aedes aegypti]
          Length = 142

 Score = 67.7 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 47/92 (51%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + + D      R SG GGQ V  T++ V +TH PTG+V+QC   RS  KN+ +A  +L A
Sbjct: 33  LRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNREEARRLLVA 92

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           KL ELE   +   A      + +     + RS
Sbjct: 93  KLDELENGDQSVEAQQRRIDQKKHSEAARRRS 124


>gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           Af293]
 gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           Af293]
 gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           A1163]
          Length = 208

 Score = 67.7 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 48/83 (57%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I ++D  +   + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L
Sbjct: 51  LKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNEKIARQIL 110

Query: 281 RAKLYELELQKREEIANIGESSK 303
             K+ EL        A   E ++
Sbjct: 111 ADKVEELLKGDASRNAIRAERAR 133


>gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi]
          Length = 225

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D      R SG GGQ V  T++ V +TH PTG+VVQC   RS  +N+  A  +L  
Sbjct: 114 LQEDDLEESFVRGSGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRSLFENRRIARQLLVT 173

Query: 283 KLYELELQKR--EEIANIGESSKTEIGWGRQIR 313
           KL +L   ++  E      +  K      R++R
Sbjct: 174 KLDQLINGEQSVEAQRQRLDQRKQTEAARRKMR 206


>gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis]
          Length = 168

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           S +   P   D +E +I E       +   G GGQ +N  +S V++ H+PTG+VV CQ  
Sbjct: 32  SKMPPRPKFTDDMERDIEEKFL----HGGRGPGGQKINKCNSKVQLRHVPTGIVVDCQAT 87

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           RS+ +N+  A   L  +L + E   +     + +    +     + R
Sbjct: 88  RSRDQNRKIAREKLALRLAQWENGDQPIERELAKIQWEQQSKRSKER 134


>gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar]
 gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar]
          Length = 166

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 15/145 (10%)

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
              + G   +G      G   L  + P         S + +      D      ++E + 
Sbjct: 9   IFQVTGKVTWGT----SGRPPLFTVPPV--------SLAHVQSNGKKDYIDLPVLNEDEL 56

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
                R SG GGQ  N T + V + HIPTG+VV+C Q RS   N+ +A  ++R KL   E
Sbjct: 57  DEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKRARQIMREKL---E 113

Query: 289 LQKREEIANIGESSKTEIGWGRQIR 313
           +  + E ++I ++ K  I   +  R
Sbjct: 114 VTYKGEESDILKNKKESIQRKQDKR 138


>gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 171

 Score = 67.3 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 223 ISESDCRIDTYRAS-GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           I E D          G GGQ +N T+S V++THIPTG+VV CQ  RSQ +N+A A   L 
Sbjct: 35  IKEEDIEEKFLHGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLA 94

Query: 282 AKLYEL 287
            KL + 
Sbjct: 95  LKLDDF 100


>gi|322419681|ref|YP_004198904.1| Class I peptide chain release factor [Geobacter sp. M18]
 gi|320126068|gb|ADW13628.1| Class I peptide chain release factor [Geobacter sp. M18]
          Length = 106

 Score = 67.3 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI ESD +++ YRASG GGQH NTTDSAVRI H+PTG+V Q  + RSQ +N+ +A   L
Sbjct: 2   VEIKESDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQAQNREKALERL 61

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQ 311
              L   E ++++ IA        E     +
Sbjct: 62  AEMLRRREQKRKKRIATKVPRGAKEKRLSDK 92


>gi|46575986|gb|AAT01347.1| unknown protein [Oryza sativa Japonica Group]
          Length = 499

 Score = 67.3 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 38/94 (40%), Gaps = 1/94 (1%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNL 92
           +LW N  ++   +         +  +K+++ +  +  ++ +L+  +  +  + ++     
Sbjct: 95  NLWDNPAKSHETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTS 154

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                 ++  Q   LL G  D   A + V AG+ 
Sbjct: 155 VDATEFLDRYQMYKLLKGPYDKEGACIIVTAGSD 188



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            + + + E+D  I    +      H N   SA+R+ HI TGV  +   ERS   NK +A 
Sbjct: 191 PVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAI 247

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQI-RSYV 316
           + L+AKL  +  + R       +    E  + R+  R+Y 
Sbjct: 248 SRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRTYS 287


>gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36]
 gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36]
          Length = 171

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 223 ISESDCRIDTYRAS-GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           I E D          G GGQ +N ++S V++THIPTG+VV CQ  RSQ +N+A A   L 
Sbjct: 35  IKEEDLEEKFLHGGRGPGGQKINKSNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLA 94

Query: 282 AKLYEL 287
            KL + 
Sbjct: 95  LKLDDY 100


>gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 184

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 2/129 (1%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
                 +   +     FS      V       ++  S+      + +G GGQ +N T+SA
Sbjct: 4   WRIRPQWRQPNGILRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSA 63

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V++ H PTG+VV+ Q  RS+ +N+  A  +L  K+      ++   A   E+ +      
Sbjct: 64  VQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123

Query: 310 RQ--IRSYV 316
            +   R Y 
Sbjct: 124 EKKAKRKYR 132


>gi|115756417|ref|XP_001202254.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115938185|ref|XP_798467.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 156

 Score = 66.9 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 44/82 (53%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ E +      R SG GGQ  N T + V + HIPTG+VV+C Q RSQ +N+  A  +++
Sbjct: 31  DLKEEELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGLVVKCHQTRSQSENQKIARLLMK 90

Query: 282 AKLYELELQKREEIANIGESSK 303
            +L +     +  I+   ++  
Sbjct: 91  ERLDQHLHADQSAISQYQQTMN 112


>gi|226329846|ref|ZP_03805364.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198]
 gi|225200641|gb|EEG82995.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198]
          Length = 90

 Score = 66.9 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 277 WNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
            ++L A++   E+QKR+E  A+   +         +IR+Y   P   V D R N+     
Sbjct: 1   MSVLGARIRAAEMQKRQEAEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTFYRL 59

Query: 336 SDVLDGDLDDFMKATLA 352
            +V++G LD  ++  + 
Sbjct: 60  DEVMEGKLDPLIQPIVT 76


>gi|213423387|ref|ZP_03356375.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 62

 Score = 66.9 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+   +S  
Sbjct: 1   YSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQG 60

Query: 201 R 201
           R
Sbjct: 61  R 61


>gi|326517198|dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 170

 Score = 66.9 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/60 (46%), Positives = 42/60 (70%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            + C + T+++SG GGQH N  +SAVR+ H PTG+V Q  ++RSQHKN++ A + LR  +
Sbjct: 7   MAQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVEDRSQHKNRSSALSRLRTLI 66


>gi|213419088|ref|ZP_03352154.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 118

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 7/113 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAG 124
               DD  + +   + L+  K +     +  Q   L     D  +A+LEV AG
Sbjct: 69  L---DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAG 118


>gi|46446182|ref|YP_007547.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399823|emb|CAF23272.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 118

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 50/70 (71%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C++ T+R+SG+GGQH+N T+SAVR+TH PTG+VV  Q  RSQ++NK      LR  + 
Sbjct: 17  AECQVQTFRSSGSGGQHINVTNSAVRLTHFPTGIVVSSQTFRSQYRNKQNCLAKLRQTVE 76

Query: 286 ELELQKREEI 295
           +L  ++ + I
Sbjct: 77  KLNYRQPKRI 86


>gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog,
           mitochondrial isoform a [Mus musculus]
 gi|81895172|sp|Q80VP5|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65
           homolog, mitochondrial; Flags: Precursor
 gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus]
 gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus]
          Length = 184

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 43/79 (54%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q
Sbjct: 41  ASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQ 100

Query: 266 ERSQHKNKAQAWNMLRAKL 284
            RS  +N+  A  +L+ K+
Sbjct: 101 TRSVDQNRKIARKVLQEKV 119


>gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus]
          Length = 152

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 43/79 (54%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q
Sbjct: 41  ASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQ 100

Query: 266 ERSQHKNKAQAWNMLRAKL 284
            RS  +N+  A  +L+ K+
Sbjct: 101 TRSVDQNRKIARKVLQEKV 119


>gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica]
 gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica]
          Length = 154

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 46/90 (51%)

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            ++ R  S S   +          ++ E++ R    R SG GGQ +N   +  +ITHIPT
Sbjct: 3   KSASRAFSTSRALLKKTPQMPPRPKVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPT 62

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           G+VV  Q+ RS  +N+  A  +L  KL ++
Sbjct: 63  GLVVSSQKTRSLEENRKIARQILADKLEQM 92


>gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
 gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
          Length = 713

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 41/91 (45%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                S  ++         + + E D      R SG GGQ +N   + V++TH+PTG  V
Sbjct: 579 PEWYTSGTYMLQPGSRKYPLTLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKV 638

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            CQ+ RS+ +N+  A   +   L +L    R
Sbjct: 639 TCQETRSRDRNRELARRRMSLTLEKLVRGDR 669


>gi|289613196|emb|CBI59790.1| unnamed protein product [Sordaria macrospora]
          Length = 250

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 41/62 (66%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+  A  +L A
Sbjct: 83  LPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREILAA 142

Query: 283 KL 284
           K+
Sbjct: 143 KV 144


>gi|226320937|ref|ZP_03796485.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233639|gb|EEH32372.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 88

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LYE E  K++E      + K ++G G    +IR+Y   P   + D R NI   
Sbjct: 1   MKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDRSERIRTYNF-PQNRITDHRANITLY 57

Query: 334 SPSDVLDGDLDDFMKAT 350
              + + G+LD  +   
Sbjct: 58  KLEEFMQGELDPLLDPL 74


>gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 171

 Score = 65.8 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +E EI E   +       G GGQ +N ++S V++THIPTG VV CQ  RSQ +N+ +A  
Sbjct: 38  VEEEIKEVFLK----GGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKARE 93

Query: 279 MLRAKLYELE 288
           +L  KL EL+
Sbjct: 94  ILALKLEELQ 103


>gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 171

 Score = 65.8 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +E EI E   +       G GGQ +N ++S V++THIPTG VV CQ  RSQ +N+ +A  
Sbjct: 38  VEEEIKEVFLK----GGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKARE 93

Query: 279 MLRAKLYELE 288
           +L  KL EL+
Sbjct: 94  ILALKLEELQ 103


>gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus]
          Length = 142

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 43/79 (54%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q
Sbjct: 41  ASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQ 100

Query: 266 ERSQHKNKAQAWNMLRAKL 284
            RS  +N+  A  +L+ K+
Sbjct: 101 TRSVDQNRKIARKVLQEKV 119


>gi|153006316|ref|YP_001380641.1| class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5]
 gi|152029889|gb|ABS27657.1| Class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5]
          Length = 122

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C    +   G GGQH N T+SAVR+ H PTGV V   + RSQ +N+  A   LR +L  L
Sbjct: 25  CEETFFVGGGPGGQHRNKTESAVRLVHRPTGVTVTATERRSQLQNREAALARLRERLGPL 84

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRS 314
             + +           T    G Q R 
Sbjct: 85  AHRPKAR-------RPTRPTRGSQERR 104


>gi|242059479|ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
 gi|241930860|gb|EES04005.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/63 (47%), Positives = 43/63 (68%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E     C + T++ASG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+A A + LR
Sbjct: 93  EELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRASALSRLR 152

Query: 282 AKL 284
             +
Sbjct: 153 TLI 155


>gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus
           floridanus]
          Length = 138

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 11/124 (8%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
              +     + +RH  +S +            ++ E+D      R SG GGQ  N T++A
Sbjct: 9   CKNVPVRSKSYKRHLDYSKVP-----------KLDEADLEEKFIRGSGPGGQATNKTNNA 57

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V + H PTG+VV+C + RS   NK +A  ++  KL  L  ++    A I    K +    
Sbjct: 58  VSLKHKPTGLVVKCHETRSLWDNKKRAREIMITKLDNLLNKEYSIEAQIRGLEKKQQSQK 117

Query: 310 RQIR 313
              R
Sbjct: 118 ENKR 121


>gi|229815133|ref|ZP_04445470.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
 gi|229809363|gb|EEP45128.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
          Length = 126

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/79 (43%), Positives = 50/79 (63%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           S+ I+    DC I  +RASG GGQ VNTTDSAVR+ H+P+G+VV  ++ RSQ +N+A   
Sbjct: 16  SMPIDELVRDCDIQAFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCL 75

Query: 278 NMLRAKLYELELQKREEIA 296
             L+ +L       ++ +A
Sbjct: 76  RKLKEELTRRARPFKKRVA 94


>gi|210634150|ref|ZP_03298012.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
 gi|210158897|gb|EEA89868.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
          Length = 126

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 45/70 (64%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            +C +  +RASG GGQ VNTTDSAVR+ H+P+G+VV  ++ RSQ +N+A     L+A+L 
Sbjct: 24  RECEVQVFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCLRKLKAELE 83

Query: 286 ELELQKREEI 295
                 ++  
Sbjct: 84  RRARPPKQRK 93


>gi|139437086|ref|ZP_01771246.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
 gi|133776733|gb|EBA40553.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
          Length = 132

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           W        + +E    DC +  +RA+G GGQ VNTTDSAVR+ H PTG+VV  ++ RSQ
Sbjct: 14  WREYAHYAEMSVEELARDCEVQVFRATGPGGQGVNTTDSAVRMKHGPTGIVVTARESRSQ 73

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            +N++     LRA+L       R  +         +
Sbjct: 74  FQNRSCCLRKLRAELERRGRPPRRRVKTKVPQRSRQ 109


>gi|296213216|ref|XP_002753183.1| PREDICTED: uncharacterized protein C12orf65-like [Callithrix
           jacchus]
          Length = 170

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQIAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum]
          Length = 179

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 4/138 (2%)

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A   L                    R     SI  +  +D S   ++ ES+      R 
Sbjct: 29  GADARLTKRNSTSCTTCRP----MINRTRLIFSIVRFKHIDYSRVPQLVESELEEQHVRG 84

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ  N T + V + H+PTG+VV+C + RS  +N+ +A   L  KL  L    +   
Sbjct: 85  SGPGGQATNKTSNCVVLKHVPTGLVVKCHETRSLDQNRKKARQYLVTKLDNLLNGDQSVE 144

Query: 296 ANIGESSKTEIGWGRQIR 313
           A + E  K       + R
Sbjct: 145 AQMREIEKKNTLNKERKR 162


>gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Anolis carolinensis]
          Length = 197

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 44/83 (53%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                S +      + +  + ++E+D      R SG GGQ  N T + V + H+P+G+VV
Sbjct: 67  PQWPGSLVLAVSKKNSNNLLPLNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPSGIVV 126

Query: 262 QCQQERSQHKNKAQAWNMLRAKL 284
           +C Q RS  +N+ +A  +L+ K+
Sbjct: 127 KCHQTRSVEQNRKKARTILQEKV 149


>gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
           181]
 gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
           181]
          Length = 208

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 48/83 (57%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I ++D  +   + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L
Sbjct: 51  LKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNEKIARQIL 110

Query: 281 RAKLYELELQKREEIANIGESSK 303
             K+ EL        A   E ++
Sbjct: 111 ADKVEELLKGDASRNAIRAERAR 133


>gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 136

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 44/83 (53%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ES+      + SG GGQ +N T SAV++ H+PT  VV+ Q  RS+ +N+  A  +L  
Sbjct: 7   IDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIALQILAE 66

Query: 283 KLYELELQKREEIANIGESSKTE 305
           K+  L+       A + E+ +  
Sbjct: 67  KVELLQKGDESRAAIVAETKRKR 89


>gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius]
          Length = 167

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++E +      R SG GGQ  N T + V + H PTG+VV+C Q RS   N+ +A  ++R 
Sbjct: 52  LNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRARQIMRE 111

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIR 313
           KL   E+  + E ++I ++ K  I   +  R
Sbjct: 112 KL---EVIYKGEESDILKNKKESIQRKQDKR 139


>gi|99034620|ref|ZP_01314576.1| hypothetical protein Wendoof_01000612 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 89

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A  +LRA+LYE+E QK+E   +    S+   G    +IR+Y   P   + D R N+    
Sbjct: 1   ALKVLRARLYEIERQKKEMERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHR 59

Query: 335 PSDVL-DGDLDDFMKATLA 352
              ++ +G+LD+F++A ++
Sbjct: 60  LEQIIKEGELDEFIEALIS 78


>gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius]
          Length = 167

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++E +      R SG GGQ  N T + V + H PTG+VV+C Q RS   N+ +A  ++R 
Sbjct: 52  LNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRARQIMRE 111

Query: 283 KL---YELELQKREEIANIGESSKTEIG 307
           KL   Y+ E     +        K + G
Sbjct: 112 KLEVIYKGEESDILKNKKESIQRKQDKG 139


>gi|282890772|ref|ZP_06299292.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499365|gb|EFB41664.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 118

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 48/80 (60%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            +C +  +RA G+GGQHVN TDSAVR+TH PTG+V+ CQ  RSQH NK +    LR ++ 
Sbjct: 15  KECTMTAFRARGSGGQHVNVTDSAVRLTHNPTGIVITCQVHRSQHLNKKECLVKLREEVE 74

Query: 286 ELELQKREEIANIGESSKTE 305
               +K + +      +  +
Sbjct: 75  RRNYRKPKRVPTRIPHAVVQ 94


>gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS
           6054]
 gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 156

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 223 ISESDCRIDTYRAS-GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           I E +      +   G GGQ +N ++S V++TH+PTG+VV CQ  RSQ  N+ +A  +L 
Sbjct: 17  IKEEELDEKFLKGGRGPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILA 76

Query: 282 AKLYELELQK--REEIANIGESSKTEIGWGRQIRSYV 316
            KL +L   +  R  + N  ++   +    +  R Y 
Sbjct: 77  LKLDDLNNPETSRNAVVNDRKTKVKQSKSKKANRKYT 113


>gi|218778396|ref|YP_002429714.1| protein chain release factor B-like protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759780|gb|ACL02246.1| Protein chain release factor B-like protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 139

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPN 176
           Y  + +G G  E Q  A  +   + + AE+RK   +  E   G+  G I+S  L++    
Sbjct: 4   YATITSGRGPAECQWAAARVRDRFVKEAEERKIPVKIRESIPGDNPGDIRSCLLILDREK 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           A  +LK  +G    +  SPY    +R   
Sbjct: 64  ARDFLKSWEGTILWIGQSPYRPYHKRKNW 92


>gi|213026528|ref|ZP_03340975.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 54

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
           +  Q   L     D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ 
Sbjct: 2   QQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRV 54


>gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa
           102]
          Length = 187

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
             RI      +     F+                 + +      + SG GGQ +N T+SA
Sbjct: 7   PRRIPRTHLLATLSRPFTLTAPQSKNLPPRPKPPPDCEIEESFLKGSGPGGQKINKTNSA 66

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           V++ H+PTG+VV+ Q  RS+ +N+  A  +L  K+ +L   ++   +
Sbjct: 67  VQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDDLLHGEQSRSS 113


>gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 1 [Nomascus leucogenys]
 gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 2 [Nomascus leucogenys]
 gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 3 [Nomascus leucogenys]
 gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 4 [Nomascus leucogenys]
          Length = 166

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 5 [Pan troglodytes]
 gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 1 [Pan troglodytes]
 gi|114647629|ref|XP_001169362.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 3 [Pan troglodytes]
 gi|114647633|ref|XP_001169404.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
 gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Pan troglodytes]
 gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Pan troglodytes]
          Length = 166

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|74733574|sp|Q9H3J6|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65,
           mitochondrial; Flags: Precursor
 gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens]
 gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens]
 gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens]
 gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens]
 gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens]
 gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct]
          Length = 166

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos
           saltator]
          Length = 165

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 45/88 (51%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E+D +    R SG GGQ  N T++AV + H PTG+VV+C + RS   N+ +A  +L  
Sbjct: 58  LEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPTGIVVKCHETRSLWDNQKRARELLVT 117

Query: 283 KLYELELQKREEIANIGESSKTEIGWGR 310
           KL  L  ++    A I    + +     
Sbjct: 118 KLDNLLNKEHSIEAQIRAIQQKQRACKE 145


>gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera]
          Length = 178

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD +    +  G GGQ  N T +A+ + H PTG+VV+C + RS  +N+  A  +L  
Sbjct: 71  LEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPTGLVVKCHETRSLDQNRKIARKILLT 130

Query: 283 KLYEL 287
           +L  L
Sbjct: 131 RLDNL 135


>gi|297693336|ref|XP_002823974.1| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Pongo
           abelii]
 gi|297693338|ref|XP_002823975.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Pongo
           abelii]
 gi|297693340|ref|XP_002823976.1| PREDICTED: uncharacterized protein C12orf65-like isoform 3 [Pongo
           abelii]
 gi|297693342|ref|XP_002823977.1| PREDICTED: uncharacterized protein C12orf65-like isoform 4 [Pongo
           abelii]
 gi|297693344|ref|XP_002823978.1| PREDICTED: uncharacterized protein C12orf65-like isoform 5 [Pongo
           abelii]
          Length = 166

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLYLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|302343659|ref|YP_003808188.1| class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
 gi|301640272|gb|ADK85594.1| Class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
          Length = 113

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E +   + +RASG GGQH N  ++ VR+TH+P+G+VV   + RS+ +N+  A   L  +
Sbjct: 8   PEHELSWEYFRASGPGGQHRNKVETGVRLTHLPSGLVVSATERRSREQNRQAALERLARR 67

Query: 284 LYELELQKR 292
           L +     +
Sbjct: 68  LADQAKPVK 76


>gi|55958422|emb|CAI16617.1| mitochondrial translational release factor 1 [Homo sapiens]
          Length = 226

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 11/149 (7%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILL 73
           +N  +    L    +   +  N    + L R    L    +  +EIQ     + +   + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK---QFESLLSGE-ADSNDAYLEVHAG--AGG 127
           +   ++D+  + +   +  Q I  ++       F+SL+  E  D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALE 156
              Q +   +  MY  ++  + ++ E L 
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLN 226


>gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R]
          Length = 268

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 38/66 (57%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+  A  +L 
Sbjct: 161 ELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRILL 220

Query: 282 AKLYEL 287
            KL  L
Sbjct: 221 GKLDAL 226


>gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS
           513.88]
 gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger]
          Length = 198

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 47/81 (58%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++I ++D  +   + +G GGQ +N T+SAV+I H PTGVVV+ Q  RS+ +N+  A  +L
Sbjct: 43  LKIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLL 102

Query: 281 RAKLYELELQKREEIANIGES 301
             K+ EL    +   A   + 
Sbjct: 103 ADKVEELLHGDQSRAAIKADR 123


>gi|325066842|ref|ZP_08125515.1| peptide chain release factor RF1 [Actinomyces oris K20]
          Length = 68

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    +IR+Y   P   + D RT  +  +   VLDGDL   + + +A+ 
Sbjct: 7   VDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMD 54


>gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
 gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
          Length = 236

 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 42/69 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + + +SD        SG GGQ +N T SAV++ HIPTG+VV+ Q  RS+  N+  A  +L
Sbjct: 39  VPLPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSRTVNRKMARKIL 98

Query: 281 RAKLYELEL 289
           + ++ E EL
Sbjct: 99  QERIEEAEL 107


>gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
           HRM2]
 gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
           HRM2]
          Length = 118

 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++ I+++D      + SG GGQ VN T  AV + H+PTG+ V+C  ERSQH N+  A   
Sbjct: 18  DLGINKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPTGITVKCGSERSQHLNRFLALRR 77

Query: 280 LRAKLY 285
           L  ++ 
Sbjct: 78  LVDRIE 83


>gi|73995153|ref|XP_543374.2| PREDICTED: similar to CG30100-PA [Canis familiaris]
          Length = 440

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ES+      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 329 LDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARQILQE 388

Query: 283 KL 284
           K+
Sbjct: 389 KV 390


>gi|125528646|gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group]
          Length = 246

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/60 (46%), Positives = 40/60 (66%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              C + T++ASG GGQH N  +SAVR+ H PTG++ Q  ++RSQH N+A A + LR  +
Sbjct: 83  MGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALSRLRTLI 142


>gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus]
          Length = 220

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 94  LNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKMARKILQE 153

Query: 283 KL 284
           K+
Sbjct: 154 KV 155


>gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
 gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
          Length = 264

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 39/70 (55%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           I  E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+  A  
Sbjct: 154 IVPELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRKIARK 213

Query: 279 MLRAKLYELE 288
            L  KL +L 
Sbjct: 214 RLLEKLDKLA 223


>gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
 gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
          Length = 248

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S  S          + I++ E D R    R SG GGQ +N   + V + HIPT   + CQ
Sbjct: 112 SAGSYAFARDGSKKMPIDLDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTSTRITCQ 171

Query: 265 QERSQHKNKAQAWNMLRAKLY 285
             RS+ +N+  A   L  +L 
Sbjct: 172 LTRSRAQNRELARRQLSQRLE 192


>gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R]
 gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R]
          Length = 275

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 38/66 (57%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+  A  +L 
Sbjct: 166 ELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRILL 225

Query: 282 AKLYEL 287
            KL  L
Sbjct: 226 GKLDAL 231


>gi|108758265|ref|YP_629628.1| peptidyl-tRNA hydrolase domain-containing protein [Myxococcus
           xanthus DK 1622]
 gi|108462145|gb|ABF87330.1| peptidyl-tRNA hydrolase domain protein [Myxococcus xanthus DK 1622]
          Length = 129

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/71 (43%), Positives = 38/71 (53%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             C +D + ASG GGQH NTT S VR+TH PT + V   + RSQ +NK  A   LR  L 
Sbjct: 28  KACEVDYFIASGPGGQHRNTTASGVRLTHAPTELSVSATERRSQVQNKGVALERLREGLK 87

Query: 286 ELELQKREEIA 296
            L    +   A
Sbjct: 88  VLTFVPKVRRA 98


>gi|212697039|ref|ZP_03305167.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675814|gb|EEB35421.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 115

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G   D DN  + +  +  +T   + W +  +A+ +M +     +       
Sbjct: 13  ELDKNLKMIGAHLDPDNLFKEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72

Query: 62  IQDRLCDNLILLELALEEDDC-SILQETSDNLQRIKLEVEYKQ 103
           +++ L D   L+++  E ++    L +  ++L  +K +    +
Sbjct: 73  LKEELEDQSDLIDIIEETNEELDSLVDVENSLNMLKKKYHLLK 115


>gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 165

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E++ R    +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 55  LDENELREQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKLARRILQE 114

Query: 283 KL 284
           K+
Sbjct: 115 KV 116


>gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 491

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E++E D      R SG GGQ  N T + V + H PT + V+CQ  RS  +N+  A   LR
Sbjct: 387 ELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRKIARKRLR 446

Query: 282 AKLYEL 287
           AKL E 
Sbjct: 447 AKLDEF 452


>gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
 gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
          Length = 205

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/71 (39%), Positives = 46/71 (64%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + + +SD   +  + SG GGQ +N T SAV++ HIPTG+VV+ Q  RS+  N+  A  +L
Sbjct: 23  VPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMARRIL 82

Query: 281 RAKLYELELQK 291
           + ++ EL+L +
Sbjct: 83  QDRIEELQLGE 93


>gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus]
          Length = 143

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 38/76 (50%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +      D    + + E +      +  G GGQ  N T + V + H+P+G+VV+C Q RS
Sbjct: 41  VQAAGKKDRPTLLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARRILQEKV 116


>gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 175

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 45/74 (60%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + + +SD   +  + SG GGQ +N T SAV++ HIPTG+VV+ Q  RS+  N+  A  +L
Sbjct: 28  VPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMARRIL 87

Query: 281 RAKLYELELQKREE 294
           + ++ EL+L     
Sbjct: 88  QDRIEELQLGDEAR 101


>gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST]
 gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST]
          Length = 151

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 41/80 (51%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + + D      R SG GGQ V  T++ V +TH PTG+VVQC   RS  +N+ +A  ML  
Sbjct: 40  LRDEDLEESFVRGSGPGGQAVAKTNNKVVLTHKPTGIVVQCHTTRSLFENRREARKMLIG 99

Query: 283 KLYELELQKREEIANIGESS 302
           KL +L    +   A +    
Sbjct: 100 KLDQLYNGDQSVEAQLQRIE 119


>gi|197927088|ref|NP_001102535.2| hypothetical protein LOC498179 [Rattus norvegicus]
 gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus]
          Length = 181

 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++ES+      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 55  LNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKMARKILQE 114

Query: 283 KL 284
           K+
Sbjct: 115 KV 116


>gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A]
 gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa]
 gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A]
          Length = 172

 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 41/62 (66%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+  A  +L A
Sbjct: 7   LPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREILAA 66

Query: 283 KL 284
           K+
Sbjct: 67  KV 68


>gi|156552109|ref|XP_001605206.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
           vitripennis]
          Length = 159

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E D  I   R SG GGQ  N T + V + H+PTG+V++C + RSQ +N   A   L  
Sbjct: 45  INEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRSQTQNLKIAKEKLIN 104

Query: 283 K---LYELELQKREEIANIGESSKTEIGWGRQIR 313
           K   LY  E     +   +     +E    ++ R
Sbjct: 105 KLDLLYNGEDAVENQKKKLLAKKTSEKQRRQKKR 138


>gi|126324306|ref|XP_001375022.1| PREDICTED: similar to RIKEN cDNA 2810006K23 gene [Monodelphis
           domestica]
          Length = 212

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++E D      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 94  LNERDLEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLAREILQG 153

Query: 283 KL 284
           K+
Sbjct: 154 KV 155


>gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 196

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
                 +   +     FS      V       ++  S+      + +G GGQ +N T+SA
Sbjct: 4   WRIRPQWRQPNGILRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSA 63

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V++ H PTG+VV+ Q  RS+ +N+  A  +L  K+      ++   A   E+ +      
Sbjct: 64  VQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123

Query: 310 RQ 311
            +
Sbjct: 124 EK 125


>gi|213401645|ref|XP_002171595.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
 gi|211999642|gb|EEB05302.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
          Length = 144

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 45/92 (48%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP         + E+D      R  G GGQ +N T    ++ H P+G++V+CQ+ RS+
Sbjct: 22  FVYPAFIQQRFYHLVEADLDETFIRGHGPGGQKINKTSIVCQLRHKPSGLIVRCQETRSR 81

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            +N+  A   L  KL  L   ++  +A   + 
Sbjct: 82  EQNRKIARKRLAEKLDLLANGEKSRLAQDRQR 113


>gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Sus scrofa]
          Length = 202

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 41/81 (50%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           T+ + +      D    + + E +      +  G GGQ  N T + V + HIP+G+VV+C
Sbjct: 36  TAGAPVQAAGKKDRPALLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHIPSGIVVKC 95

Query: 264 QQERSQHKNKAQAWNMLRAKL 284
            Q RS  +N+  A  +L+ K+
Sbjct: 96  HQTRSVDQNRKLARRILQEKV 116


>gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 294

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 36/66 (54%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ  RS   N+  A   L 
Sbjct: 185 ELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDTRSLSLNRKLARRWLL 244

Query: 282 AKLYEL 287
            KL +L
Sbjct: 245 EKLDKL 250


>gi|134115677|ref|XP_773552.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256178|gb|EAL18905.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 315

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 40/68 (58%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E +      +  G GGQ +N T+S+V +THIPTG+ VQ Q  RS+ +N+  A  +L
Sbjct: 125 VEIPEDELEERFVKGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRIL 184

Query: 281 RAKLYELE 288
             +L  L 
Sbjct: 185 AERLEVLR 192


>gi|315305718|ref|ZP_07875316.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
 gi|313625914|gb|EFR95448.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
          Length = 81

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5  LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNAQIEETKEL 64

Query: 76 ALEEDDCSILQETSDN 91
            E+ D  + +   + 
Sbjct: 65 LSEKLDDDMREMAKEE 80


>gi|68061541|ref|XP_672770.1| peptide release factor [Plasmodium berghei strain ANKA]
 gi|56490109|emb|CAI01539.1| peptide release factor, putative [Plasmodium berghei]
          Length = 210

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 85/210 (40%), Gaps = 19/210 (9%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED--------DCSILQETSDNL 92
           + + + ++ +     +   K++     +  + L  A E +        + S ++E + N+
Sbjct: 3   KIQNMSKQLKIAWEELDIYKQLLT--ENMKLTLRKAEESEQIDTINFNEYSEVKEINYNI 60

Query: 93  QRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           + I   +  +  +        +   DSN+  LE+  G GG E++ +AN L  MY  + + 
Sbjct: 61  ENICDSIVKQLLDIYTNFVNFNHHLDSNEVRLEIVPGVGGQEAKMFANELFSMYEHFCKL 120

Query: 148 RKFKTEALE--IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           + ++       + +  +   K+    IKG   Y     E G+HR+ RI    ++ +  TS
Sbjct: 121 KNYECLIKNNKLCEEGKGIYKNIVAYIKGEGVYVDFIQEIGIHRVQRIPI--NSKKMQTS 178

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            S + ++       ++E      + D    
Sbjct: 179 TSIVLLFDEKQTKEKLEKKMKIPKNDFLIK 208


>gi|187607772|ref|NP_001119948.1| hypothetical protein LOC100004874 [Danio rerio]
 gi|162416112|sp|A5WUX7|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65
           homolog, mitochondrial; Flags: Precursor
 gi|148726035|emb|CAN87842.1| novel protein [Danio rerio]
          Length = 156

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      R SG GGQ  N T + V + HIP+G+VV+C + RS   N+ +A  +LR 
Sbjct: 42  VHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETRSVDLNRKRAREILRE 101

Query: 283 KLY--------ELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           KL         EL   K+E +    +  +       + R + 
Sbjct: 102 KLEVAYKGEESELLKMKKESMQKKQDKRRKVNENIEKKRRFK 143


>gi|283780964|ref|YP_003371719.1| peptide chain release factor I [Pirellula staleyi DSM 6068]
 gi|283439417|gb|ADB17859.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068]
          Length = 191

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S   V      ++ +E    +C+I+  R  G GGQH N  ++AV ITH PTG+  Q  +
Sbjct: 18  ASLAMVDAPHPAALPLEKLARECQIEFTRRGGPGGQHRNKVETAVVITHQPTGLAGQASE 77

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES-SKTEIGWGRQI 312
            RSQ  N+ +A+  LR +L      +RE  A I     K   G   QI
Sbjct: 78  TRSQDHNREEAYQRLRIELATGLRTRREPTAPISPLWEKFRKGRAVQI 125


>gi|266622715|ref|ZP_06115650.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865552|gb|EFC97850.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 51

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +QPY MVKD RTN E  + + VLDG LD F+ A L  
Sbjct: 1   MQPYTMVKDHRTNAETGNVNSVLDGALDLFIYAYLRW 37


>gi|255556733|ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis]
 gi|223541467|gb|EEF43017.1| peptide chain release factor, putative [Ricinus communis]
          Length = 185

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
              C +DTY+ASG GGQH N  +SAVRI H+PTG++ Q  ++RSQHKN+A
Sbjct: 1   MRQCEMDTYKASGPGGQHRNKRESAVRIKHLPTGIISQAVEDRSQHKNRA 50


>gi|297734721|emb|CBI16955.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/53 (49%), Positives = 38/53 (71%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           E     C + T+++SG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+A
Sbjct: 58  EQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 110


>gi|321255196|ref|XP_003193341.1| hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
 gi|317459811|gb|ADV21554.1| Hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
          Length = 316

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 40/68 (58%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI E +      R  G GGQ +N T+S+V +THIPTG+ VQ Q  RS+ +N+  A  +L
Sbjct: 126 VEIPEDELEERFVRGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRIL 185

Query: 281 RAKLYELE 288
             +L  L 
Sbjct: 186 AERLEVLR 193


>gi|225459890|ref|XP_002263666.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 507

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/53 (49%), Positives = 38/53 (71%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           E     C + T+++SG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+A
Sbjct: 58  EQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 110


>gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial [Danio rerio]
          Length = 156

 Score = 62.7 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      R SG GGQ  N T + V + HIP+G+VV+C + RS   N+ +A  +LR 
Sbjct: 42  VHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETRSVDLNRKRAREILRE 101

Query: 283 KLY--------ELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           KL         EL   K+E +    +  +       + R + 
Sbjct: 102 KLEVAYKGEESELLKMKKESMQKKQDKRRKVNENIEKKRRFK 143


>gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum]
          Length = 132

 Score = 62.7 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 52/113 (46%)

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
            R     SI  +  +D S   ++ ES+      R SG GGQ  N T + V + H+PTG+V
Sbjct: 3   NRTRLIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLV 62

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           V+C + RS  +N+ +A   L  KL  L    +   A + E  K       + R
Sbjct: 63  VKCHETRSLDQNRKKARQYLVTKLDNLLNGDQSVEAQMREIEKKNTLNKERKR 115


>gi|207111525|ref|ZP_03245687.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 45

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/35 (80%), Positives = 31/35 (88%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           G GGQHVN T+SAVRITH PTG+VVQCQ +RSQHK
Sbjct: 11  GRGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHK 45


>gi|33322102|gb|AAQ06771.1|AF496112_1 peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 64

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR
Sbjct: 1   ASLFAGDLLRMYEKYAENQGWKVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHR 60

Query: 190 LVRI 193
           + RI
Sbjct: 61  VQRI 64


>gi|212697119|ref|ZP_03305247.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM
          7454]
 gi|212675894|gb|EEB35501.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM
          7454]
          Length = 87

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 28/82 (34%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           ++  +    L  K  DP +  +  + K + RE   L   +    EI+          EL
Sbjct: 5  LEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTEL 64

Query: 76 ALEEDDCSILQETSDNLQRIKL 97
            E +D  ++      +   K 
Sbjct: 65 LKEAEDKEMIDLLKAEIDENKK 86


>gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21]
 gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21]
          Length = 132

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            E+ +SE         ASG GGQHVN + S V + H+PTGV V+C + RSQ  N+  A  
Sbjct: 19  EELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARR 78

Query: 279 MLRAKLYEL--ELQKREEIAN 297
           +L  K+      L K+E+ A 
Sbjct: 79  LLLEKITAAGGGLTKKEQAAE 99


>gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia]
          Length = 723

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 38/67 (56%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI ++D      +  G GGQ +N T + V++TH PTG+ ++CQ+ R    NK  A   L
Sbjct: 611 VEIHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPTGIQIKCQKSRDLETNKNYAIKAL 670

Query: 281 RAKLYEL 287
           + KL E 
Sbjct: 671 KEKLDEQ 677


>gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM
           4136]
          Length = 141

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 11/113 (9%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I E D      R +GAGGQ +N T S V +TH+PTG+ V+CQ+ERSQ  N+  A   L +
Sbjct: 24  IREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRVVAREELCS 83

Query: 283 KLYEL----ELQKREE-IANIGESSKTEIGWGRQI------RSYVLQPYQMVK 324
           KL E     +L++R E      ++ K   G   +I      RS V +    V+
Sbjct: 84  KLEERLAAVKLERRNEVEKKKRQNRKRPRGLKERILKTKHQRSEVKKQRSRVR 136


>gi|209526204|ref|ZP_03274734.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209493301|gb|EDZ93626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 98

 Score = 61.9 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTN 329
           +   +A  +LRAKLY+++LQ+R+E       S+   G    +IR+Y  +    + D R  
Sbjct: 3   ELLERAIQILRAKLYDIKLQERQEKVTSLRRSQVGTGARSEKIRTYNYKD-NRITDHRLG 61

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            +  + +++LDGD+D  M+A ++  +
Sbjct: 62  -QNFTLANILDGDIDQVMEACISQDQ 86


>gi|189911793|ref|YP_001963348.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776469|gb|ABZ94770.1| Peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
          Length = 131

 Score = 61.9 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 42/74 (56%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ESD +    +ASG GGQ+VN   +AV + H+PTG  V+C   RSQ  N+ +A ++L  
Sbjct: 27  IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLLCL 86

Query: 283 KLYELELQKREEIA 296
           +L + +  +     
Sbjct: 87  ELEKEQRPESFRQK 100


>gi|298713472|emb|CBJ27027.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 191

 Score = 61.9 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            E+ + D      + SG GGQ +N   + V++TH+P+GV V CQ  R  H N+  A   L
Sbjct: 35  FELLDEDIEERFVKGSGPGGQKINKVRNCVQLTHVPSGVSVSCQDSRELHANRHIARKRL 94

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           + K+ E +L      A+     +      ++ RS
Sbjct: 95  KEKV-EFQLM----GADSKVGRRINKIRNKKARS 123


>gi|293331715|ref|NP_001169537.1| hypothetical protein LOC100383413 [Zea mays]
 gi|224029957|gb|ACN34054.1| unknown [Zea mays]
          Length = 229

 Score = 61.9 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 42/63 (66%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E     C + T++ASG GGQH N  +SAVR+ H+P G++ Q  ++RSQHKN+A A + LR
Sbjct: 4   EELMEQCDMGTFKASGPGGQHCNKRESAVRLKHLPIGIIAQAVEDRSQHKNRASALSRLR 63

Query: 282 AKL 284
             +
Sbjct: 64  TLI 66


>gi|86159828|ref|YP_466613.1| class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776339|gb|ABC83176.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 123

 Score = 61.9 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L 
Sbjct: 24  AECDESFFVGGGPGGQHRNKTESGVRLVHRPTEITVTATERRSQLQNRGAALERLRARLQ 83

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRS 314
            L  + +           T+   G + R 
Sbjct: 84  PLAHRPK-------PRRPTKPTRGAKERR 105


>gi|61886963|ref|XP_584238.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos
           taurus]
 gi|297484729|ref|XP_002694521.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos
           taurus]
 gi|296478551|gb|DAA20666.1| chromosome 12 open reading frame 65 ortholog [Bos taurus]
          Length = 172

 Score = 61.9 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +      D    + + E +      +  G GGQ  N T + V + H+P+G+VV+C Q RS
Sbjct: 41  VQAAGKKDRPTLLSLDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAK----------LYELELQKREEIANIGESSKTE 305
             +N+  A  +L+ K          L   E ++ E+     +    E
Sbjct: 101 VDQNRKLARRILQEKVDVFYNGENSLVCREKREAEKRKQERKKRAKE 147


>gi|115634718|ref|XP_787728.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115976393|ref|XP_001185397.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 90

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGW 308
           +R T    G+  + QQERSQHKN++ A  ML+  +Y   L  +     ++  S     G 
Sbjct: 1   MRATSGMNGL-AESQQERSQHKNRSIAMTMLQPHIYNRILADQTSSERSMRSSQVGTGGR 59

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
             +IR+Y  Q    + D R  +        +D
Sbjct: 60  SEKIRTYNYQ-QDRITDHRRGLTVHGVPSAID 90


>gi|197123884|ref|YP_002135835.1| class I peptide chain release factor [Anaeromyxobacter sp. K]
 gi|196173733|gb|ACG74706.1| Class I peptide chain release factor [Anaeromyxobacter sp. K]
          Length = 128

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L 
Sbjct: 29  AECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQ 88

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRS 314
            L  + +            E     + R 
Sbjct: 89  PLAHRPKPRRPTKPTRGAKERRLSEKKRR 117


>gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem]
 gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis
           Bem]
          Length = 132

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 38/66 (57%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            E+ +SE         ASG GGQHVN + S V + H+PTGV V+C + RSQ  N+  A  
Sbjct: 19  EELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARR 78

Query: 279 MLRAKL 284
           +L  K+
Sbjct: 79  LLLEKI 84


>gi|162312297|ref|NP_596474.2| peptide release factor [Schizosaccharomyces pombe 972h-]
 gi|212288570|sp|Q9Y811|YONI_SCHPO RecName: Full=Uncharacterized peptide chain release factor-like
           protein C1105.18c, mitochondrial; Flags: Precursor
 gi|157310457|emb|CAB50981.2| peptide release factor [Schizosaccharomyces pombe]
          Length = 162

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHT + S          +E  + E D         G GGQ +N T    ++ HIPTG++V
Sbjct: 30  RHTWYCS---KKETPYQLER-LQEEDIEETFICGKGPGGQKINKTSIVAQVKHIPTGIIV 85

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELEL 289
           + Q  RS+ +N+  A   L  K+ E + 
Sbjct: 86  RSQDTRSREQNRCIARKRLTEKVDEFKH 113


>gi|115378407|ref|ZP_01465569.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310819398|ref|YP_003951756.1| peptidyl-tRNA hydrolase domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364597|gb|EAU63670.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392470|gb|ADO69929.1| Peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 125

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 37/71 (52%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             C ++ + ASG GGQH NTT S VR+TH  T + V   + RSQ +NK  A   LR  L 
Sbjct: 24  KTCEVEYFIASGPGGQHRNTTASGVRLTHPSTELSVTATERRSQIQNKGVALERLREGLK 83

Query: 286 ELELQKREEIA 296
            L    +   A
Sbjct: 84  VLTFVPKVRRA 94


>gi|289806630|ref|ZP_06537259.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 97

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRT 328
            K KA+A ++L A+++  E  KR++       +    G    + R+Y   P   V D R 
Sbjct: 1   IKTKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRI 59

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           N+      + ++G LD  ++  +
Sbjct: 60  NLTLYRLDETMEGKLDMLIEPIV 82


>gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila]
 gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 636

 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 34/75 (45%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P   + I+ +I E D      + SG GGQ VN T +   + H PTG+ V+    R   KN
Sbjct: 512 PQKKERIKPQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPTGIQVRSHASRELDKN 571

Query: 273 KAQAWNMLRAKLYEL 287
           K      L  KL  L
Sbjct: 572 KQYCMKQLSEKLDVL 586


>gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys
           calcitrans]
          Length = 183

 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++E D      R SG GGQ +N T + V + H+PT +VV+C   RS  KN+ +A  +L  
Sbjct: 62  LNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTNIVVKCHIHRSAQKNRVEARKILLE 121

Query: 283 KL 284
           KL
Sbjct: 122 KL 123


>gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata]
          Length = 187

 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 16/115 (13%)

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
             P  D S+E +I E       +  +G GGQ +N  +S V+I H+P+ +VV CQ  RS+ 
Sbjct: 39  PRPKFDASMEADIEEKFL----HGGTGPGGQKINKCNSKVQIKHVPSNIVVTCQATRSRD 94

Query: 271 KNKAQAWNMLRAKLYELELQKRE------------EIANIGESSKTEIGWGRQIR 313
           +N+  A   L  +L   +L + +            E A +    + +   G++ R
Sbjct: 95  QNRKIAREKLALELERWQLGQEKDGNSGVQVMTEREQALLEWKRQQKRSKGKKSR 149


>gi|149633371|ref|XP_001507092.1| PREDICTED: similar to My030 protein [Ornithorhynchus anatinus]
          Length = 217

 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++ES+      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+ +A  +L+ 
Sbjct: 99  LNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKKAREILQE 158

Query: 283 KL 284
           K+
Sbjct: 159 KV 160


>gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
          Length = 196

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 2/129 (1%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
                 +   +     FS      V       ++  S+      + +G GGQ +N T+SA
Sbjct: 4   WRIRPQWWQPNGILRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSA 63

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V++ H PTG+VV+ Q  RS+ +N+  A  +L  K+      ++   A   E+ +      
Sbjct: 64  VQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123

Query: 310 RQ--IRSYV 316
            +   R Y 
Sbjct: 124 EKKAKRKYR 132


>gi|240280457|gb|EER43961.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 186

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +  S+      + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  
Sbjct: 37  LDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAE 96

Query: 283 KLYELELQKRE 293
           K+ EL+L+  +
Sbjct: 97  KV-ELQLKGEQ 106


>gi|221101663|ref|XP_002163246.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 159

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           S  + + ESD +    + SG GGQ +N T + V + H  TG++V+CQ+ RS  +N+  A 
Sbjct: 51  SDTVILKESDFQEKFIKGSGPGGQKINKTSNCVELKHDATGIIVKCQETRSLERNRVIAR 110

Query: 278 NMLRAK---LYELELQKREEIANIGESSKTEIGWGRQIR 313
             L  K   LY     K+++  +  +  +  I   R++R
Sbjct: 111 ERLLEKLRFLYNPSESKQQQRLDAKQKQEKNIERKRRLR 149


>gi|148912865|ref|YP_001293444.1| hypothetical protein ORF037 [Pseudomonas phage 73]
          Length = 164

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + +  +D RIDT+R  GA    V + ++ VRITHIPTGV V+    RS H NK+ A   L
Sbjct: 1   MNLDPADIRIDTFRKPGASA-WVASVETCVRITHIPTGVFVERCDLRSAHANKSAAMADL 59

Query: 281 RAKLYEL 287
           R KL E+
Sbjct: 60  RKKLDEM 66


>gi|220918650|ref|YP_002493954.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956504|gb|ACL66888.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 123

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L 
Sbjct: 24  AECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQ 83

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRS 314
            L  + +            E     + R 
Sbjct: 84  PLAHRPKPRRPTRPTRGAKERRLTEKKRR 112


>gi|323172436|gb|EFZ58073.1| peptide chain release factor 1 domain protein [Escherichia coli
           LT-68]
          Length = 145

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 3/87 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK 102
               DD  + +   D L+  K +    
Sbjct: 69  L---DDPEMREMAQDELREAKEKASNW 92


>gi|296814610|ref|XP_002847642.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
           CBS 113480]
 gi|238840667|gb|EEQ30329.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
           CBS 113480]
          Length = 247

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 58/162 (35%), Gaps = 45/162 (27%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
              A   I    A G  K   G  R  R SP           +++   P      + EIS
Sbjct: 34  YSRALAQISKQAAQGRFKQHVGDVRFFRTSPP----------AAVKQMPPRPTIDDSEIS 83

Query: 225 ESDCRIDTYRASGAGGQHVN------------------------------TTDSAVRITH 254
            S  +      SG GGQ +N                               T+SAV++ H
Sbjct: 84  GSYLK-----GSGPGGQKINEYFNKKKYPILYSKLIIHEHPYSAEDKCQNKTNSAVQLIH 138

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           IPT  VV+CQ  RSQ +N+  A  +L  K+  LE   +   A
Sbjct: 139 IPTNTVVKCQATRSQSQNRKIAKQILAEKVELLEKGDQSRAA 180


>gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like isoform 1 [Acyrthosiphon pisum]
 gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like [Acyrthosiphon pisum]
 gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 150

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E++      + SG GG  VN   + V + H PTG+V++C + R    N+  A   L  
Sbjct: 41  INENELEEMFVKGSGPGGSAVNKNANCVVLKHKPTGIVIKCHESRCVEDNRKMAREKLAI 100

Query: 283 KLYELELQK---REEIANIGESSKTEIGWGRQ 311
           KL  +E        +   I E    +  W R+
Sbjct: 101 KLDVIENGNNSVEAQKKAIIEKKNAQKEWKRK 132


>gi|148726036|emb|CAN87843.1| novel protein [Danio rerio]
          Length = 137

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 8/102 (7%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      R SG GGQ  N T + V + HIP+G+VV+C + RS   N+ +A  +LR 
Sbjct: 23  VHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETRSVDLNRKRAREILRE 82

Query: 283 KLY--------ELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           KL         EL   K+E +    +  +       + R + 
Sbjct: 83  KLEVAYKGEESELLKMKKESMQKKQDKRRKVNENIEKKRRFK 124


>gi|170578563|ref|XP_001894460.1| peptide chain release factor 2, programmed [Brugia malayi]
 gi|170584020|ref|XP_001896825.1| peptide chain release factor 2, programmed [Brugia malayi]
 gi|158595842|gb|EDP34329.1| peptide chain release factor 2, programmed, putative [Brugia
           malayi]
 gi|158598945|gb|EDP36701.1| peptide chain release factor 2, programmed, putative [Brugia
           malayi]
          Length = 93

 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            +++E   + N I    +++    D + L++  ++E+D     E  + L + +  V+ K+
Sbjct: 9   RILKEYSKIKNDIESFSKLESDYNDAISLMKSTIDENDEEFFSEIENELLKSEKLVKRKE 68

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQD 132
              L +  AD+     E+H+G GGTES D
Sbjct: 69  TNFLFTDGADNT----EIHSGVGGTESDD 93


>gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni]
 gi|238664498|emb|CAZ35331.1| conserved hypothetical protein [Schistosoma mansoni]
          Length = 155

 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 37/80 (46%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D        SG GGQ +N T + V + HIPTG+VV+CQ  R   +N+  A   L  K
Sbjct: 31  NECDLSEMAVLGSGPGGQSINKTANCVVLKHIPTGIVVKCQDSRELERNRILARQRLNDK 90

Query: 284 LYELELQKREEIANIGESSK 303
           L      +   I  +    K
Sbjct: 91  LDVHFNGENSRIEQLRHREK 110


>gi|203459047|ref|YP_002224203.1| gp204 [Mycobacterium phage ScottMcG]
 gi|197312494|gb|ACH62849.1| gp204 [Mycobacterium phage ScottMcG]
          Length = 118

 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DC ++T R SG GGQ+ N  D+AVRI H P+G V + Q+ERSQ +NK  A+  + A+  
Sbjct: 12  ADCVVETKRGSGKGGQNRNKRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM-AESS 70

Query: 286 ELELQKREEIAN 297
           + +L  + ++AN
Sbjct: 71  KFQLWLKRQVAN 82


>gi|183221718|ref|YP_001839714.1| putative translation release factor [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|167780140|gb|ABZ98438.1| Putative translation release factor [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 110

 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 42/74 (56%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ESD +    +ASG GGQ+VN   +AV + H+PTG  V+C   RSQ  N+ +A ++L  
Sbjct: 6   IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLLCL 65

Query: 283 KLYELELQKREEIA 296
           +L + +  +     
Sbjct: 66  ELEKEQRPESFRQK 79


>gi|169838354|ref|ZP_02871542.1| protease Do [candidate division TM7 single-cell isolate TM7a]
          Length = 351

 Score = 60.0 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335
           ++ ++L  L+ +  +E A +    ++ IG G    +IR+Y   P   + D R +  ++  
Sbjct: 266 IITSRL--LQSKIEKEQAKLTAERRSLIGSGDRSEKIRTYNF-PQDRITDHRISYSRSGI 322

Query: 336 SDVLDGDLDDFMKATLAIKK 355
              +DG+++D  +   + ++
Sbjct: 323 PQAMDGNINDLTEHLQSYER 342


>gi|295798158|emb|CAX69014.1| peptide chain release factor class A (=1), fragment [uncultured
           bacterium]
          Length = 170

 Score = 60.0 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I E D      R+ G GGQ++N   + V + H  +G+ ++CQ +R+Q  N+  A  +L +
Sbjct: 53  IREPDLEERFVRSRGPGGQNINKVSTCVYLKHRTSGIEIKCQSQRTQSANRIAARALLVS 112

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           K+ +    +   ++   +  +  I   R+ R+
Sbjct: 113 KIEQ----EAAALSQRQKKQRFLIERARRTRT 140


>gi|224109198|ref|XP_002315120.1| predicted protein [Populus trichocarpa]
 gi|222864160|gb|EEF01291.1| predicted protein [Populus trichocarpa]
          Length = 59

 Score = 60.0 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
            ++SI+ E+ E D  I T RASG GGQ+VN  ++A RITH PTGV V+C 
Sbjct: 5   PEESIDAELPEEDLEITTSRASGRGGQNVNKVETAARITHTPTGVPVRCT 54


>gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria]
          Length = 169

 Score = 60.0 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      R SG GGQ  N T + V + HIP+G VV+C Q RS   N+ +A +++R 
Sbjct: 54  LDEDELEEQFVRGSGPGGQATNKTGNCVVLKHIPSGTVVKCHQTRSVDINRKRARDIMRE 113

Query: 283 KL 284
           KL
Sbjct: 114 KL 115


>gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens
           PCA]
 gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
           KN400]
          Length = 126

 Score = 59.6 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 43/68 (63%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E+ +SE+D      R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ  N+  A   
Sbjct: 22  ELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFLARRE 81

Query: 280 LRAKLYEL 287
           +  ++  L
Sbjct: 82  ILERIERL 89


>gi|225629578|ref|ZP_03787603.1| Protein chain release factor B [Wolbachia endosymbiont of
          Muscidifurax uniraptor]
 gi|225591567|gb|EEH12582.1| Protein chain release factor B [Wolbachia endosymbiont of
          Muscidifurax uniraptor]
          Length = 69

 Score = 59.6 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 37/68 (54%)

Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
          RL  L+++  +  LWQ+  +A+ +++ER  + N +    +++    D + L++ A++E+D
Sbjct: 2  RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 82 CSILQETS 89
               E  
Sbjct: 62 EEFFSEVE 69


>gi|169838607|ref|ZP_02871795.1| peptide chain release factor 2 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 61

 Score = 59.6 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 42/61 (68%)

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GGT++QD+A ML RMY R+AEK   + + +E   G+EAG+K++ + I GP AYG L  
Sbjct: 1   GVGGTDAQDFAEMLERMYLRFAEKSSLEAKIVERSSGDEAGLKTSVIEINGPYAYGRLHS 60

Query: 184 E 184
           E
Sbjct: 61  E 61


>gi|116328132|ref|YP_797852.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331415|ref|YP_801133.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120876|gb|ABJ78919.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125104|gb|ABJ76375.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 154

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)

Query: 207 SSIWVYPVVDDSIEI-EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S+     + + +++ E+ E++      R+ G GGQ+VN   +AV + H PTG+ V+C  
Sbjct: 7   VSVEKESKLLELMDVLEVKENELEESFTRSGGKGGQNVNKVSTAVHLKHKPTGIEVKCSL 66

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            R+Q  N+ +A  +L  K+ E   +K+              +    R+   Y  +   
Sbjct: 67  YRTQGLNRYKARAILCEKIQEENRKKQGTVSDERKNTIRNKQKDAKRKKEKYSRKDQN 124


>gi|78224169|ref|YP_385916.1| class I peptide chain release factor [Geobacter metallireducens
           GS-15]
 gi|78195424|gb|ABB33191.1| Class I peptide chain release factor [Geobacter metallireducens
           GS-15]
          Length = 121

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 45/72 (62%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E+ ++E+D      R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ  N+  A   
Sbjct: 22  ELGVAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPTGIEVKCMKDRSQSVNRFLARRE 81

Query: 280 LRAKLYELELQK 291
           +  ++  L+  +
Sbjct: 82  ILVRIERLQKGE 93


>gi|46203521|ref|ZP_00208999.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 51

 Score = 59.2 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/39 (64%), Positives = 32/39 (82%)

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +LQPYQ+VKDLRT  + T P +VLDGDLD FM+A+LA +
Sbjct: 1   MLQPYQLVKDLRTGTQSTDPDEVLDGDLDPFMEASLAQR 39


>gi|169838095|ref|ZP_02871283.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division
           TM7 single-cell isolate TM7a]
          Length = 157

 Score = 59.2 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 4/109 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V +   L  K  DP +  +  +     +    +D  +      + R  +   L E 
Sbjct: 5   LDDVVLKHKELTEKLMDPEVVSDPKKIMEYNKALNSIDEVVKKYTYYKSRKEELEGLKED 64

Query: 76  ALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
              E D  + +          + I    E  +   L     D  +  +E
Sbjct: 65  LKIEKDAEMKEMMHEEIHLIEEEIPHLEEELKVLLLPKDPNDDKNVIME 113


>gi|206889859|ref|YP_002249325.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741797|gb|ACI20854.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 114

 Score = 59.2 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I ESD      + SG GGQ +N T + V + HIP+ + V+C +ERSQ  N+  A  ML  
Sbjct: 23  IKESDIEEKFIKCSGHGGQKLNKTSTGVYLKHIPSAIEVKCTKERSQGLNRFFARRMLVE 82

Query: 283 KLYEL 287
           K+ E 
Sbjct: 83  KIKEF 87


>gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1]
 gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1]
          Length = 131

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/75 (40%), Positives = 38/75 (50%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +   +      R SG GGQ +N T S V + H PTGV V+CQ ERSQ  N+  AW  L  
Sbjct: 16  VRVEEVDERFVRGSGPGGQKINKTSSTVWLRHGPTGVEVRCQAERSQAANREVAWWELCE 75

Query: 283 KLYELELQKREEIAN 297
           KL     ++RE    
Sbjct: 76  KLEARVRREREASLQ 90


>gi|203460691|ref|YP_002224425.1| gp204 [Mycobacterium phage Spud]
 gi|197312272|gb|ACH62628.1| gp204 [Mycobacterium phage Spud]
          Length = 113

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  + A+  
Sbjct: 7   ADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM-AESS 65

Query: 286 ELELQKREEIAN 297
           + +L  + ++AN
Sbjct: 66  KFQLWLKRQVAN 77


>gi|29566685|ref|NP_818251.1| gp200 [Mycobacterium phage Bxz1]
 gi|109393384|ref|YP_656182.1| gp202 [Mycobacterium phage Catera]
 gi|29425410|gb|AAN16834.1| gp200 [Mycobacterium phage Bxz1]
 gi|91981206|gb|ABE67921.1| gp202 [Mycobacterium phage Catera]
          Length = 113

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  + A+  
Sbjct: 7   ADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM-AESS 65

Query: 286 ELELQKREEIAN 297
           + +L  + ++AN
Sbjct: 66  KFQLWLKRQVAN 77


>gi|68171148|ref|ZP_00544556.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999418|gb|EAM86059.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 39

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + PYQMVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 1   MHPYQMVKDIRTGHEVGNINSVLDGNLDSFIISALTTK 38


>gi|169840413|ref|ZP_02873601.1| peptide chain release factor 1 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 56

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 37/44 (84%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +VNTTDSAVRITH+PTG+VV  Q E+SQ KNK +A ++LR++L 
Sbjct: 13  NVNTTDSAVRITHLPTGLVVTNQDEKSQIKNKEKALSVLRSRLL 56


>gi|328463691|gb|EGF35277.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC
          5462]
          Length = 76

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%)

Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
          D  + R   L     DP +  +      L +E   + + ++  K+ +  L D     E+ 
Sbjct: 2  DGLLVRYEGLEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESEEVL 61

Query: 77 LEEDDCSILQETSDN 91
           E  D  +     ++
Sbjct: 62 RESKDEDMEALAKED 76


>gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Meleagris gallopavo]
          Length = 165

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 40/64 (62%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           ++++E++ +    R  G GGQ  N T + V + H+P+G+VV+C Q RS  KN+  A  +L
Sbjct: 54  VQLTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREIL 113

Query: 281 RAKL 284
           + K+
Sbjct: 114 QEKV 117


>gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14]
          Length = 152

 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E D      + SG GGQ +N   + V + H PTG+ V+CQ+ R    N+  A  +L  K
Sbjct: 37  REEDLNEQFVKGSGKGGQKINKVRNCVLLKHSPTGIQVRCQKTRCLDDNRRIARKLLTEK 96

Query: 284 LYEL---ELQKREEIANIGESSK 303
           L +L   E   R +     +  K
Sbjct: 97  LDDLYNGEKSVRNQKIQKIQKRK 119


>gi|317490594|ref|ZP_07949067.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325831509|ref|ZP_08164763.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1]
 gi|316910296|gb|EFV31932.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325486763|gb|EGC89211.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1]
          Length = 124

 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 49/96 (51%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DC +  +RASG GGQ VNTTDSAVR+TH+P+G+    ++ RSQ +N+      LR +  
Sbjct: 24  RDCDVQAFRASGPGGQCVNTTDSAVRMTHVPSGMTATSRESRSQFRNRQLCLQKLRDRFA 83

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
              +  +   A     +  E    ++ R    +  +
Sbjct: 84  REAVPPKARRATKATRASKERRLAQKRRRSQTKAQR 119


>gi|204305830|ref|YP_002224647.1| gp203 [Mycobacterium phage Cali]
 gi|197312803|gb|ACH63156.1| gp203 [Mycobacterium phage Cali]
          Length = 110

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  + A+  
Sbjct: 4   ADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM-AESS 62

Query: 286 ELELQKREEIAN 297
           + +L  + ++AN
Sbjct: 63  KFQLWLKRQVAN 74


>gi|322421630|ref|YP_004200853.1| Class I peptide chain release factor [Geobacter sp. M18]
 gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18]
          Length = 143

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 37/63 (58%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++E D       ASG GGQHVN + S V + HIP+G+ V+C + RSQ  N+  A  +L  
Sbjct: 23  VAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPSGLEVKCMESRSQSLNRFLARRLLLE 82

Query: 283 KLY 285
           KL 
Sbjct: 83  KLE 85


>gi|281416112|ref|YP_003347848.1| gp198 [Mycobacterium phage ET08]
 gi|255927791|gb|ACU41412.1| gp198 [Mycobacterium phage ET08]
 gi|255928079|gb|ACU41698.1| gp203 [Mycobacterium phage LRRHood]
          Length = 136

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  + A+  
Sbjct: 30  ADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM-AESS 88

Query: 286 ELELQKREEIAN 297
           + +L  + ++AN
Sbjct: 89  KFQLWLKRQVAN 100


>gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum]
          Length = 163

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 36/78 (46%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D      R  G GGQ +NTT + V + H PTG++V+CQ  R   KN+  A   L  K
Sbjct: 41  NECDLSEMFVRGWGPGGQSINTTANCVVLKHEPTGIMVKCQDSRELEKNRELARRRLNDK 100

Query: 284 LYELELQKREEIANIGES 301
           L      +   I  I   
Sbjct: 101 LDVHFNGENSRIQQIHRQ 118


>gi|332375198|gb|AEE62740.1| unknown [Dendroctonus ponderosae]
          Length = 139

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D      R SG GG  ++TT S V + HIPTG+VV+CQ+ R   +N+ +A   L  
Sbjct: 32  LDECDLEEQHIRGSGPGGSKISTTCSCVLLKHIPTGLVVKCQETRFLEQNRKRARLNLLT 91

Query: 283 KLYEL---ELQKREEIANIGESSKTEIGW-GRQIR 313
           KL      E   + + A +  + K  +     +IR
Sbjct: 92  KLDIHLNGENSVQAQTARLQANRKASMDQKKEKIR 126


>gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster]
 gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster]
 gi|157816290|gb|ABV82139.1| AT22563p [Drosophila melanogaster]
          Length = 146

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 26/144 (18%)

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G+ R + + P     + +  +S   V           + ESD      R SG GGQ VN 
Sbjct: 4   GLVRFLALPPTAVRCKSNLDYSRFPV-----------LQESDIEETFMRGSGPGGQAVNK 52

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--------ELQKREEIAN 297
           T + V + H+PT + V+C   R   KN+ +A  +L  KL              K +E   
Sbjct: 53  TSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHSIAAQVKAQEQRK 112

Query: 298 IGESSKTE-------IGWGRQIRS 314
             E  + +         W  + R+
Sbjct: 113 STERRRRQEKLQEMKKSWQDRERT 136


>gi|194214381|ref|XP_001492966.2| PREDICTED: similar to My030 protein [Equus caballus]
          Length = 166

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 63  QFVKGHGPGGQATNKTSNCVVLKHMPSGIVVKCHQTRSVDQNRKLARKILQEKV 116


>gi|154277694|ref|XP_001539684.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150413269|gb|EDN08652.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 187

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +  S+      + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  
Sbjct: 37  LDLSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAE 96

Query: 283 KLYELELQKRE 293
           K+ EL+L+  +
Sbjct: 97  KV-ELQLKGEQ 106


>gi|296423832|ref|XP_002841456.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637696|emb|CAZ85647.1| unnamed protein product [Tuber melanosporum]
          Length = 237

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 25/118 (21%)

Query: 223 ISESDCRIDTYRASGAGGQH-----------------------VNTTDSAVRITHIPTGV 259
           + E +      + SG GGQ                        VN T SAV++ H+PTG+
Sbjct: 48  VKEEEIEESFLKGSGPGGQKSESQYPLHCMLLRTHVTPGNISAVNKTSSAVQLKHLPTGI 107

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--IRSY 315
           VV+ Q  RS+ +N+  A  +L  KL  +E      +  + E  +       +   R Y
Sbjct: 108 VVKSQATRSRSQNRKIARKILAEKLEFMERGTESRVGALAERDRRRKASKTKKAKRKY 165


>gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni]
 gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni]
          Length = 167

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 41/88 (46%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            IE    ESD      R SG GGQ VN T + V + H+PT + ++C   R   KN+ +A 
Sbjct: 50  EIEFSFKESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNLTIKCHTHRLASKNRIEAR 109

Query: 278 NMLRAKLYELELQKREEIANIGESSKTE 305
            +L  KL E    +    A I    + +
Sbjct: 110 KLLLEKLDEHLNGENSIAAQIKGQEQRK 137


>gi|255725070|ref|XP_002547464.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240135355|gb|EER34909.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 172

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/55 (41%), Positives = 34/55 (61%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           +   G GGQ +N  +S V++ HIPTG+V+ CQ  RS+ +N+A A   L  KL + 
Sbjct: 47  HGGRGPGGQKINKCNSKVQLKHIPTGIVIDCQATRSKEQNRAIAREKLALKLDDY 101


>gi|255718823|ref|XP_002555692.1| KLTH0G15158p [Lachancea thermotolerans]
 gi|238937076|emb|CAR25255.1| KLTH0G15158p [Lachancea thermotolerans]
          Length = 155

 Score = 57.7 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +E E+ E       +   G GGQ +N  +S V++ H+P+G+VV+CQ+ RS+ +N+  A 
Sbjct: 31  QMETELEEKFL----HGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRDQNRKLAR 86

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
             L  ++ + +         +        G   + R
Sbjct: 87  EKLALRIAQWQGGGGPVAREVALHEWERQGKRSKER 122


>gi|213026980|ref|ZP_03341427.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 102

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 3/85 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 14  LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE 100
               DD  + +   + L+  K +  
Sbjct: 74  L---DDPEMREMAQEELREAKEKRR 95


>gi|324558223|gb|ADY49829.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 51

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 31/47 (65%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           +  +I+T RASG GGQ+VN   +AVR+TH  +G+ V C  ER QH  
Sbjct: 4   NSVKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQHLK 50


>gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi]
 gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi]
          Length = 148

 Score = 57.3 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T++ V + H+PTG+ V+C   R   KN+ +A  +L  
Sbjct: 34  LQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGLTVKCHLHRLASKNRIEARKILLD 93

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           KL      ++   A +    + +     + R 
Sbjct: 94  KLDAHLNGEQSIAAQLKVFDQKK--SSERKRR 123


>gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
          Length = 544

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D         G GGQ+VN   + V + H+PTG+ V+  ++R   +N+  A   L+ 
Sbjct: 414 LEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPTGLSVKVHEDRLLQRNRIIARVRLQE 473

Query: 283 KLYEL---ELQKREEIANIGESSKTEIGWGRQ 311
           KL +L   E       A   +    +  W R+
Sbjct: 474 KLDQLLNGENSFLALKAKELKQKSLKAQWKRR 505


>gi|169837781|ref|ZP_02870969.1| peptide chain release factor 1 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 63

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  +++ +IEI+ +D +ID +R+ G GGQ VNTTDSA
Sbjct: 1   MQRVPSTESQGRVHTSTVTVAVLPEAEET-DIEINPNDLKIDVFRSGGHGGQSVNTTDSA 59


>gi|24214865|ref|NP_712346.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24195884|gb|AAN49364.1| peptidyl-tRNA hydrolase involved in peptide chain release
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 155

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 207 SSIWVYPVVDDSIEI-EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S+     + + +EI +I E++      R+ G GGQ+VN   +AV + H PTG+ V+C  
Sbjct: 7   VSVEKESKLLELMEILQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSL 66

Query: 266 ERSQHKNKAQAWNMLRAKLYEL 287
            R+Q  N+ +A  +L  K+ + 
Sbjct: 67  YRTQGLNRYKARAILCEKIRDF 88


>gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB]
 gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB]
          Length = 136

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 44/77 (57%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ISE D R    R+SG GGQ+VN T + V + H+PTG+ V+CQQ+RSQ  N+  A  +L  
Sbjct: 20  ISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVNRLLARRLLLD 79

Query: 283 KLYELELQKREEIANIG 299
           ++  L+  +        
Sbjct: 80  RIERLKTGRIAAEKARI 96


>gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis]
 gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis]
          Length = 181

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 15/112 (13%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ES+      R SG GGQ VN T + V + H+PT + ++C   R   KN+ +A  +L  
Sbjct: 69  LQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEARKLLLD 128

Query: 283 KLYEL---------------ELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           KL                  + +  E     G+  + +  W  + R+     
Sbjct: 129 KLDAHFNGENSIAAQIKVLEQRKSTERRRRQGKMQEMKTRWQERERTEESND 180


>gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans]
 gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans]
          Length = 146

 Score = 56.9 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 15/122 (12%)

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+     +D S    + ESD      R SG GGQ VN T + V + H+PT + V+C   R
Sbjct: 15  SVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHR 74

Query: 268 SQHKNKAQAWNMLRAKLYEL--------ELQKREEIANIGESSKTE-------IGWGRQI 312
              KN+ +A  +L  KL              K +E     E  + +         W  + 
Sbjct: 75  LASKNRVEARKLLLEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQEKLQEMKKSWQDRE 134

Query: 313 RS 314
           R+
Sbjct: 135 RT 136


>gi|557260|emb|CAA57573.1| protein release factor 1 [Pseudomonas aeruginosa PAO1]
          Length = 96

 Score = 56.9 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 24/84 (28%), Gaps = 1/84 (1%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9  LDVLSDRYEELTALLGDAEVISDQDPFRAYSREYAEVEPVILRFRDYRKVQADLEGAQAL 68

Query: 76 ALEEDDCSILQETSDNLQRIKLEV 99
            +  D  +     + +   +  +
Sbjct: 69 LKDS-DPELRDLAEEEVAEARGRL 91


>gi|296121082|ref|YP_003628860.1| class I peptide chain release factor [Planctomyces limnophilus DSM
           3776]
 gi|296013422|gb|ADG66661.1| Class I peptide chain release factor [Planctomyces limnophilus DSM
           3776]
          Length = 203

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           D  ++ H S    W +PV+      E   S+C+    + SG GGQH N  ++ V + H P
Sbjct: 24  DPQTQPHASQIQGWKHPVLLSH---EQLLSECKARRQKTSGPGGQHRNKVETGVFLKHTP 80

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           TGV  Q  + RSQ +N+++A   LR +L      ++  +            W  ++R
Sbjct: 81  TGVEAQATERRSQAENQSKALKRLRLQLALEIRSQKSALEAPSPL------WKSRVR 131


>gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia]
 gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia]
          Length = 146

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 15/121 (12%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +     +D S    + ESD      R SG GGQ VN T + V + H+PT + V+C   R 
Sbjct: 16  VRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRL 75

Query: 269 QHKNKAQAWNMLRAKLYEL--------ELQKREEIANIGESSKTE-------IGWGRQIR 313
             KN+ +A  +L  KL              K +E     E  + +         W  + R
Sbjct: 76  ASKNRVEARKLLLEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQEKLQEMKKSWQDRER 135

Query: 314 S 314
           +
Sbjct: 136 T 136


>gi|45201377|ref|NP_986947.1| AGR281Cp [Ashbya gossypii ATCC 10895]
 gi|44986311|gb|AAS54771.1| AGR281Cp [Ashbya gossypii ATCC 10895]
          Length = 176

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 225 ESDCRIDTYRAS-GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           E+           G GGQ +N  +S V++ H+P+G+V++CQ  RS+ +N+  A   L A 
Sbjct: 50  EASIEEKFLHGGRGPGGQKINKCNSKVQLRHVPSGIVIECQATRSREQNRKLAREKLAAA 109

Query: 284 LYE 286
           L +
Sbjct: 110 LAQ 112


>gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta]
 gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta]
          Length = 148

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 15/121 (12%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +     +D S    + ESD      R SG GGQ VN T + V + H+PT + V+C   R 
Sbjct: 16  VRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRL 75

Query: 269 QHKNKAQAWNMLRAKLYEL--------ELQKREEIANIGESSKTE-------IGWGRQIR 313
             KN+ +A  +L  KL              K +E     E  + +         W  + R
Sbjct: 76  ASKNRVEARKLLLEKLDVHLNGEHSIATQVKAQEQRKSTERRRRQEKLLEMKKSWQDRER 135

Query: 314 S 314
           +
Sbjct: 136 T 136


>gi|265991894|ref|ZP_06104451.1| peptide chain release factor [Brucella melitensis bv. 1 str. Rev.1]
 gi|263002907|gb|EEZ15253.1| peptide chain release factor [Brucella melitensis bv. 1 str. Rev.1]
          Length = 133

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 10/110 (9%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLE 120
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILE 133


>gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis]
 gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis]
 gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis]
 gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis]
          Length = 142

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T++ V + H+PTG+ V+C   R   KN+ +A  +L  
Sbjct: 32  LQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRLASKNRIEARKILLD 91

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           KL      ++   A        +     + R 
Sbjct: 92  KLDAHLNGEQSIAAQQKV--LDQKKSSERKRR 121


>gi|268537314|ref|XP_002633793.1| Hypothetical protein CBG03485 [Caenorhabditis briggsae]
 gi|187036700|emb|CAP24377.1| hypothetical protein CBG_03485 [Caenorhabditis briggsae AF16]
          Length = 137

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+ + DC        G GGQ VNT  +AV++TH PTG VV+  + R   KN   A+  ++
Sbjct: 26  EVKKDDCEQKYISGWGPGGQKVNTAQNAVQLTHRPTGTVVKVHESRLLPKNIEIAFERMK 85

Query: 282 AKL---------YELELQKREEIANIGESSKTEIGWGRQ 311
             L         YE +L++ ++   +  + K +     +
Sbjct: 86  VVLDRQINGDNCYEEQLKRLQQAKEVKANKKRDQARKEK 124


>gi|45657623|ref|YP_001709.1| peptide chain release factor 2-like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45600863|gb|AAS70346.1| peptide chain release factor 2-like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 155

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 207 SSIWVYPVVDDSIEI-EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S+     + + +EI +I E++      R+ G GGQ+VN   +AV + H PTG+ V+C  
Sbjct: 7   VSVEKESKLLELMEILQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSL 66

Query: 266 ERSQHKNKAQAWNMLRAKLYEL 287
            R+Q  N+ +A  +L  K+ + 
Sbjct: 67  YRTQGLNRYKARAILCEKIQDF 88


>gi|256045469|ref|ZP_05448355.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 128

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 10/110 (9%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76  ALE-EDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLE 120
             +   D  +     + L  ++  +    +  Q   L    AD  +A LE
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILE 128


>gi|254582148|ref|XP_002497059.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
 gi|238939951|emb|CAR28126.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
          Length = 155

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 225 ESDCRIDTYRAS-GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           ES C         G GGQ +N  +S V++ H+PTG+VV+CQQ RS+ +N+  A   L  +
Sbjct: 31  ESQCEEKFLHGGRGPGGQKINKCNSKVQLKHLPTGIVVECQQTRSRDQNRKIAREKLALE 90

Query: 284 LYE 286
           +  
Sbjct: 91  IER 93


>gi|307265646|ref|ZP_07547199.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii
          Rt8.B1]
 gi|306919290|gb|EFN49511.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii
          Rt8.B1]
          Length = 90

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL
Sbjct: 5  LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 76 ALEEDDCSILQETSDNLQRIKLE 98
           L  +D  + +   + L +++ +
Sbjct: 65 -LSSNDEELKEMAEEELSQLEEK 86


>gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
 gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
          Length = 177

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ 285
             R  G GGQ  N T++ V + H+PTG+VV+C Q RS  +N+  A   +R KL       
Sbjct: 75  FQRGWGPGGQATNKTNNCVLLKHVPTGIVVKCHQTRSLDENRKIARQHMREKLDLHLKGQ 134

Query: 286 --ELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             EL  +KRE      E  K       + R++ 
Sbjct: 135 ESELVKEKRELAIKKREKRKKANKNLEKKRAFK 167


>gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae]
 gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae]
          Length = 141

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T + V + H+PT + ++C   R   KN+ +A  +L  
Sbjct: 32  LQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEARKLLLE 91

Query: 283 KLYEL--------ELQKREEIANIGESSKTEI-------GWGRQIRS 314
           KL              K +E     E  + +         W  + R+
Sbjct: 92  KLDAHLNGENSIAAQIKVQEQRKSTERRRRQNKLQELKKNWQERERT 138


>gi|325110517|ref|YP_004271585.1| class I peptide chain release factor [Planctomyces brasiliensis DSM
           5305]
 gi|324970785|gb|ADY61563.1| Class I peptide chain release factor [Planctomyces brasiliensis DSM
           5305]
          Length = 168

 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 36/59 (61%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           S+C +   R SG GGQH N  ++A+RI H PTGV  Q  + RSQ +N+  A   LR +L
Sbjct: 13  SECDVTRQRRSGPGGQHRNKVETAIRIEHRPTGVTGQASERRSQEENRKVALFRLRVEL 71


>gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum]
          Length = 141

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           EI   DC       SG GGQ VNT  +AV + HIPTG+VV+  + R   KN   A+  LR
Sbjct: 36  EIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPTGIVVKVHESRLLPKNIEIAYERLR 95

Query: 282 -----------AKLYELELQKREEIANIGESSKTEIGW 308
                       K YE +L+K E         K E   
Sbjct: 96  LKYALDRHVNKEKCYEEQLKKLERAKEEKLKRKREALR 133


>gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
 gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
          Length = 181

 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 15/112 (13%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ES+      R SG GGQ VN T + V + H+PT + ++C   R   KN+ +A  +L  
Sbjct: 69  LQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEARKLLLD 128

Query: 283 KLYE--------------LELQK-REEIANIGESSKTEIGWGRQIRSYVLQP 319
           KL                LE +K  E     G+  + +  W  + R+     
Sbjct: 129 KLDAHFNGENSIAAQIKVLEHRKSTERRRRQGKMQEMKTRWQERERTEESND 180


>gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba]
 gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba]
          Length = 146

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 15/121 (12%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +     +D S    + ESD      R SG GGQ VN T + V + H+PT + V+C   R 
Sbjct: 16  VRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRL 75

Query: 269 QHKNKAQAWNMLRAKLYEL--------ELQKREEIANIGESSKTE-------IGWGRQIR 313
             KN+ +A  +L  KL              K +E     E  + +         W  + R
Sbjct: 76  ASKNRVEARKLLLEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQEKLQEMKKSWQDRER 135

Query: 314 S 314
           +
Sbjct: 136 T 136


>gi|225560984|gb|EEH09265.1| hypothetical protein HCBG_02802 [Ajellomyces capsulatus G186AR]
          Length = 385

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           G   Q +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L  K+ EL+L+  +
Sbjct: 64  GKSRQSINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLKGEQ 119


>gi|302654387|ref|XP_003019001.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI
           0517]
 gi|291182691|gb|EFE38356.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI
           0517]
          Length = 212

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 21/95 (22%)

Query: 223 ISESDCRIDTYRASGAGGQHV---------------------NTTDSAVRITHIPTGVVV 261
           + ES+      + SG GGQ +                         SAV++ HIPT  VV
Sbjct: 49  LDESEITGTYLKGSGPGGQKIVSQSLIPRSLVALHKLAVSPIGMISSAVQLIHIPTNTVV 108

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           +CQ  RSQ +N+  A  +L  K+  LE  ++   A
Sbjct: 109 KCQATRSQSQNRKIAKRILAEKIELLEKGEQSRAA 143


>gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
 gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
          Length = 127

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 36/66 (54%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D      R+SG GGQHVN T + V + H PTG+ V+C +ERSQ  N+  A   L  
Sbjct: 23  VREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPTGIEVKCMRERSQSLNRFLARRELLE 82

Query: 283 KLYELE 288
           K+    
Sbjct: 83  KIEARA 88


>gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 136

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R+SG GGQ+VN   + V + H PTG+ V+C++ER Q  N+  A  +L  
Sbjct: 23  VQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPTGIEVKCRRERIQGLNRFFARRLLAE 82

Query: 283 KLYELELQKREEIANIG 299
           K+ E  L +  E     
Sbjct: 83  KIEEKVLGRISEKRQKI 99


>gi|256751359|ref|ZP_05492238.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
          CCSD1]
 gi|256749741|gb|EEU62766.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
          CCSD1]
          Length = 90

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL
Sbjct: 5  LQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 76 ALEEDDCSILQETSDNLQRIKLE 98
           L  +D  + +   + L +++ +
Sbjct: 65 -LSSNDEELKEMAEEELSQLEEK 86


>gi|222053782|ref|YP_002536144.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
 gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
          Length = 139

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 35/63 (55%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E D      R+SG GGQHVN T + V + H PTG+ V+C  ERSQ  N+  A   L  
Sbjct: 23  VREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPTGIEVKCMAERSQSLNRFLARRQLLE 82

Query: 283 KLY 285
           K+ 
Sbjct: 83  KIE 85


>gi|189425837|ref|YP_001953014.1| class I peptide chain release factor [Geobacter lovleyi SZ]
 gi|189422096|gb|ACD96494.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
          Length = 124

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 43/80 (53%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E+ + E +      RASG GGQH+N T SAV++ H+PTG+  +C +ERSQ  N+  A   
Sbjct: 22  ELGVKEEELEEQFVRASGRGGQHLNKTSSAVQVRHLPTGIEARCGRERSQSLNRFLARRE 81

Query: 280 LRAKLYELELQKREEIANIG 299
           L  K+        E+   + 
Sbjct: 82  LLEKIARHLGLVTEQDRELA 101


>gi|302421296|ref|XP_003008478.1| peptidyl-tRNA hydrolase domain-containing protein [Verticillium
           albo-atrum VaMs.102]
 gi|261351624|gb|EEY14052.1| peptidyl-tRNA hydrolase domain-containing protein [Verticillium
           albo-atrum VaMs.102]
          Length = 202

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 35/57 (61%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
            N T+SAV++ HIPTG+V++ Q  RS+ +N+  A  +L  +L +LE   +   A + 
Sbjct: 76  QNKTNSAVQLKHIPTGIVIKSQATRSRSQNRKIARQLLAERLDDLENGDQSRNAIVA 132


>gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis]
 gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis]
          Length = 141

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R SG GGQ VN T++ V + H+PTG+ V+C   R   KN+ +A  +L  
Sbjct: 32  LQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRLASKNRIEARKILLE 91

Query: 283 KLYELELQKREEIANI 298
           KL      ++   A  
Sbjct: 92  KLDVHLNGEKSIAAQQ 107


>gi|156837376|ref|XP_001642715.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113276|gb|EDO14857.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 162

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 4/98 (4%)

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
             P  ++ +E E +ES      +   G GGQ +N ++S V++ HIPTG+VV+CQ+ RS+ 
Sbjct: 24  PRPKFNEQLETECTESFM----HGGRGPGGQKINKSNSKVQLKHIPTGIVVECQETRSRD 79

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           +N+  A   +   +             I E  K    W
Sbjct: 80  QNRKIAREKMALAIERFRNGIEVNGEVISEREKAVQEW 117


>gi|82539988|ref|XP_724342.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478956|gb|EAA15907.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 172

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 12/101 (11%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQA 276
           +I I   +      + +G GGQ VN T++ V I +  T    +V++C + R   +N+  A
Sbjct: 69  DIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYA 128

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
             +L  K+  +  + +E+I N  E  +         R++  
Sbjct: 129 RELLYDKITSINNKVKEDIINQIEKRQ---------RTFFF 160


>gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
 gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
          Length = 120

 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I E D      R SG GGQ VN T++ V + H PTG+ V+C  +RS+  N+  A   L  
Sbjct: 19  IREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRFLARRELCD 78

Query: 283 KLYELE 288
            + +++
Sbjct: 79  AVEQMQ 84


>gi|196230546|ref|ZP_03129408.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
 gi|196225476|gb|EDY19984.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
          Length = 132

 Score = 53.8 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D      R+SG GGQHVN   +AV + H+P+G  V  Q  RSQ  N+  AW  L   + 
Sbjct: 23  ADFEEKFSRSSGPGGQHVNKVSTAVMLRHVPSGAAVTVQDTRSQSMNRQLAWTRLLDAIE 82

Query: 286 ELELQKREEIANIGESSKTEIG---WGRQIR 313
           E    +R    +  E  + +      G + R
Sbjct: 83  EQRRAERAARRSEIEKKRRQNSKRPRGVKER 113


>gi|213161326|ref|ZP_03347036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 42

 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 1   RSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 40


>gi|237837039|ref|XP_002367817.1| peptidyl-tRNA hydrolase domain-containing protein [Toxoplasma
           gondii ME49]
 gi|211965481|gb|EEB00677.1| peptidyl-tRNA hydrolase domain-containing protein [Toxoplasma
           gondii ME49]
          Length = 330

 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E   +  +      +  G GGQ VN T+S V I H+  G+V++CQ  RSQ KN+  A  +
Sbjct: 196 EFGTNVEEVVEQCVKGGGKGGQKVNKTNSCVVIVHLTRGLVIRCQHSRSQRKNRIMAREL 255

Query: 280 LRAKLYE-----LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           L  KL E      +  +  E      + +       ++R+   +     +  R
Sbjct: 256 LLKKLQESIRQQHQQSRDAEEKQRRRNRQPTEAQKARVRAEKQRHSDRKEQRR 308


>gi|326564767|gb|EGE14979.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1]
          Length = 62

 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 8  NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM 44
             GG+FD ++  +RL  +N + E+P +W N   A  
Sbjct: 3  KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATK 39


>gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 177

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 40/85 (47%)

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I P  S +      +   V   V   + +++ E+D      + SG GGQ +N    +V++
Sbjct: 36  IPPQTSAATLSIQPTQSQVPKEVKKRLPVQLVETDLVEKFTKGSGPGGQKINKCKHSVQL 95

Query: 253 THIPTGVVVQCQQERSQHKNKAQAW 277
            H PTG+ V+ Q+ R    N+ +A 
Sbjct: 96  WHTPTGLFVETQRFRELASNRREAR 120


>gi|313004791|emb|CAE17950.2| C. elegans protein T23B5.4a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 133

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ + DC        G GGQ VNT  +AV++TH+PTG V++  + R   KN   A+  ++
Sbjct: 26  DVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMK 85

Query: 282 AKLYEL--------ELQKREEIANIGESSKTEIGWGRQIRSYV 316
             L           E  KR +IA   +S+K  +   ++  SY 
Sbjct: 86  FVLDRQINGENCYEEQLKRLQIAKEEKSNKRRVQARKEKESYK 128


>gi|70934187|ref|XP_738357.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56514509|emb|CAH83815.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 194

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQA 276
           +I I   +      + +G GGQ VN T++ V I +  T    +V++C + R   +N+  A
Sbjct: 70  DIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYA 129

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEI 306
             +L  K+  +  + +E+I N  E  K +I
Sbjct: 130 RELLYEKITSINNKAKEDIINQIEKEKRQI 159


>gi|221505032|gb|EEE30686.1| peptidyl-tRNA hydrolase domain-containing protein, putative
           [Toxoplasma gondii VEG]
          Length = 330

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E   +  +      +  G GGQ VN T++ V I H+  G+V++CQ  RSQ KN+  A  +
Sbjct: 196 EFGTNVEEVVEQCVKGGGKGGQKVNKTNNCVVIVHLTRGLVIRCQHSRSQRKNRIMAREL 255

Query: 280 LRAKLYE-----LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           L  KL E      +  +  E      + +       ++R+   +     +  R
Sbjct: 256 LLKKLQESIRQQHQQSRDAEEKQRRRNRQPTEAQKARVRAEKQRHSDRKEQRR 308


>gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby]
 gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby]
 gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 136

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKLYELELQKREEIANIG 299
             KL  +   ++ +     
Sbjct: 77  CEKLQAVFSDEKTKTQQRI 95


>gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 136

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKLYELELQKREEIANIG 299
             KL  +   ++ +     
Sbjct: 77  CEKLQAVFSDEKTKTQQRI 95


>gi|6323311|ref|NP_013383.1| hypothetical protein YLR281C [Saccharomyces cerevisiae S288c]
 gi|74676369|sp|Q05863|YL281_YEAST RecName: Full=Uncharacterized peptide chain release factor-like
           protein YLR281C, mitochondrial; Flags: Precursor
 gi|596041|gb|AAB67327.1| Ylr281cp [Saccharomyces cerevisiae]
 gi|45269753|gb|AAS56257.1| YLR281C [Saccharomyces cerevisiae]
 gi|151940986|gb|EDN59367.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190405338|gb|EDV08605.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
 gi|256269833|gb|EEU05093.1| YLR281C-like protein [Saccharomyces cerevisiae JAY291]
 gi|259148263|emb|CAY81510.1| EC1118_1L7_1343p [Saccharomyces cerevisiae EC1118]
 gi|285813696|tpg|DAA09592.1| TPA: hypothetical protein YLR281C [Saccharomyces cerevisiae S288c]
          Length = 155

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+         +   G GGQ +N  +S V++ H PTG+VV+CQ+ RS+ +N+  A   L 
Sbjct: 32  EMEAQCTEKFLHGGRGPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLARLKLA 91

Query: 282 AKL 284
            +L
Sbjct: 92  REL 94


>gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
 gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
          Length = 136

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKLYELELQKREEIANIG 299
             KL  +   ++ +     
Sbjct: 77  CEKLQAVFSDEKTKTQQRI 95


>gi|169837782|ref|ZP_02870970.1| peptide chain release factor 1 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 62

 Score = 52.7 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +E+ AGAGG E+  +A+ L RMY R+ E   FKTE 
Sbjct: 1   MEIRAGAGGDEASLFASELYRMYLRYCEIHNFKTEL 36


>gi|54293184|ref|YP_125599.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
 gi|53753016|emb|CAH14459.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
          Length = 136

 Score = 52.7 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 41/79 (51%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I E+D       +SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  A   L
Sbjct: 17  LHIYETDLSEKFILSSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76

Query: 281 RAKLYELELQKREEIANIG 299
             KL  +   ++ +     
Sbjct: 77  CEKLQAVFSDEKTKTQQRI 95


>gi|297517598|ref|ZP_06935984.1| peptide chain release factor 1 [Escherichia coli OP50]
          Length = 92

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 3/87 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK 102
               DD  + +   D L+  K + E  
Sbjct: 69  L---DDPEMREMAQDELREAKEKSEQL 92


>gi|156343066|ref|XP_001621028.1| hypothetical protein NEMVEDRAFT_v1g7994 [Nematostella vectensis]
 gi|156206594|gb|EDO28928.1| predicted protein [Nematostella vectensis]
          Length = 87

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +++ E D      +  G GGQ VN T++ V + H+PTG+   C Q RS  +N++ A  +L
Sbjct: 5   VKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIARELL 61

Query: 281 RAKLYELELQKREEIA 296
             +L +L   K  + A
Sbjct: 62  LNQLDQLYNGKDSKAA 77


>gi|156374287|ref|XP_001629739.1| predicted protein [Nematostella vectensis]
 gi|156216746|gb|EDO37676.1| predicted protein [Nematostella vectensis]
          Length = 95

 Score = 51.9 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +++ E D      +  G GGQ VN T++ V + H+PTG+   C Q RS  +N++ A  +L
Sbjct: 5   VKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIARELL 61

Query: 281 RAKLYELELQKREEIA 296
             +L +L   K  + A
Sbjct: 62  LNQLDQLYNGKDSKAA 77


>gi|297621679|ref|YP_003709816.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
           86-1044]
 gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
           86-1044]
          Length = 139

 Score = 51.9 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 38/77 (49%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I   D        SG GGQ VN T S V + H P+G+ ++CQ ERS+  N+  A  +L  
Sbjct: 20  IRNEDLTEKFILGSGKGGQKVNKTASCVYLKHEPSGIEIKCQLERSRELNRFYARRLLCE 79

Query: 283 KLYELELQKREEIANIG 299
           K+ E  L+ + E     
Sbjct: 80  KIEEKILKIKTEKQKEI 96


>gi|169841079|ref|ZP_02874192.1| hypothetical protein cdivTM_28268 [candidate division TM7
          single-cell isolate TM7a]
          Length = 65

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 7  LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
          +   GG+FD +N    ++ L  +T +   W     ++ +++        +    ++    
Sbjct: 1  MKKSGGIFDIENLKNEINELEKRTFEADFWN-TDNSQEILKNISAKKKLLEEYDKLNGLF 59

Query: 67 CDNLIL 72
           D   +
Sbjct: 60 EDVSTI 65


>gi|207108877|ref|ZP_03243039.1| peptide chain release factor 2 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 85

 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 36/69 (52%)

Query: 3  LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
          L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63 QDRLCDNLI 71
          +D L +++ 
Sbjct: 73 KDSLDESVD 81


>gi|320102860|ref|YP_004178451.1| Class I peptide chain release factor [Isosphaera pallida ATCC
           43644]
 gi|319750142|gb|ADV61902.1| Class I peptide chain release factor [Isosphaera pallida ATCC
           43644]
          Length = 209

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             C     R SG GGQ+ N  ++A+ + H PTG+ V+  + R Q +N   A   LR  L 
Sbjct: 41  RQCDTTRTRRSGPGGQNRNKVETAIVLVHRPTGIKVEANERRRQGENLQVALFRLRIALA 100

Query: 286 ELELQKRE--EIANIGESSKTEIGW 308
                 R+  +  +     +   G 
Sbjct: 101 LAVRLPRDLAQGPSALWRGRCRQGR 125


>gi|118581341|ref|YP_902591.1| class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
 gi|118504051|gb|ABL00534.1| Class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
          Length = 117

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 43/84 (51%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            +   + + E D      R+SG+GGQHVN T S+V + HIP+G+ V   +ERSQ  N+  
Sbjct: 16  REMARLNVREEDLEEQFVRSSGSGGQHVNKTSSSVFLRHIPSGICVSASRERSQSVNRFL 75

Query: 276 AWNMLRAKLYELELQKREEIANIG 299
           A   L  ++      +  E+  I 
Sbjct: 76  ARRELLERIEAQTGAETGEMRRIA 99


>gi|300361281|ref|ZP_07057458.1| peptide chain release factor [Lactobacillus gasseri JV-V03]
 gi|300353900|gb|EFJ69771.1| peptide chain release factor [Lactobacillus gasseri JV-V03]
          Length = 53

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
            +P  W +  +A+ L+ E   +       K+++++  D    LEL   + D
Sbjct: 1  MAEPGFWDDQEQAQSLINETNRMKEKSENFKQLEEKFEDAQTALELLKTDPD 52


>gi|149179343|ref|ZP_01857902.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797]
 gi|148841815|gb|EDL56219.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797]
          Length = 179

 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 36/64 (56%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +++   +C+I+  R SG GGQH N  ++ V I HIPT    +  + R Q +N++ A   L
Sbjct: 22  LDLLLKNCQIEQVRRSGPGGQHRNKVETGVVIKHIPTNFTGEASERRQQGRNRSMALFRL 81

Query: 281 RAKL 284
           R  L
Sbjct: 82  RVNL 85


>gi|289806047|ref|ZP_06536676.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 41

 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 1   SYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 39


>gi|270159507|ref|ZP_06188163.1| putative peptide chain release factor [Legionella longbeachae
           D-4968]
 gi|289165692|ref|YP_003455830.1| unknown proteins [Legionella longbeachae NSW150]
 gi|269987846|gb|EEZ94101.1| putative peptide chain release factor [Legionella longbeachae
           D-4968]
 gi|288858865|emb|CBJ12787.1| putative unknown proteins [Legionella longbeachae NSW150]
          Length = 134

 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           +++ I+E+D        SG GGQ ++ T S V + H P+G+ ++CQ+ RS+  N+  A  
Sbjct: 15  MKLSINEADLIEKFILGSGKGGQKLHKTASTVYLKHEPSGLEIKCQESRSREDNRYFARV 74

Query: 279 MLRAKL---YELELQKREEIANIGESSKTEIGWGRQIR 313
            L  KL     LE  ++++     +  K       Q R
Sbjct: 75  RLCEKLNAILSLEKTQKQQKIEKLKRQKKRRTRRAQQR 112


>gi|68067771|ref|XP_675820.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|68077037|ref|XP_680438.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56495222|emb|CAI02598.1| conserved hypothetical protein [Plasmodium berghei]
 gi|56501376|emb|CAI04754.1| hypothetical protein PB001267.02.0 [Plasmodium berghei]
          Length = 147

 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 7/124 (5%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQA 276
           +I I   +      + +G GGQ VN T++ V I +  T    +V++C + R   +N+  A
Sbjct: 22  DIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYA 81

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQ-MVKDLRTNIEK 332
             +L  K+  +  + +E+I N  E  K +I       + RS   +  +  +K  R     
Sbjct: 82  RELLYDKITSINNKAKEDIINQIEKEKRQILKLTESEKNRSINYKKKRSEIKSNRQKHIM 141

Query: 333 TSPS 336
               
Sbjct: 142 HDSD 145


>gi|313004792|emb|CBY25203.1| C. elegans protein T23B5.4b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 149

 Score = 50.0 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--- 287
                 G GGQ VNT  +AV++TH+PTG V++  + R   KN   A+  ++  L      
Sbjct: 51  KYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDRQING 110

Query: 288 -----ELQKREEIANIGESSKTEIGWGRQIRSYV 316
                E  KR +IA   +S+K  +   ++  SY 
Sbjct: 111 ENCYEEQLKRLQIAKEEKSNKRRVQARKEKESYK 144


>gi|223936544|ref|ZP_03628455.1| Class I peptide chain release factor [bacterium Ellin514]
 gi|223894708|gb|EEF61158.1| Class I peptide chain release factor [bacterium Ellin514]
          Length = 120

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++E++      R+SG GGQ+VN   + V + H+PT V V  Q  RSQ  N+  A   L  
Sbjct: 7   LNEAELEETFSRSSGPGGQNVNKVATRVTLRHLPTNVTVSVQDSRSQFMNRQLARERLLL 66

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRS 314
                 LQ R + A   E  +      +Q R 
Sbjct: 67  A-----LQNRHQEAKDAEKHRRAKLRRQQARR 93


>gi|71994442|ref|NP_001023399.1| hypothetical protein T23B5.4 [Caenorhabditis elegans]
          Length = 125

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--- 287
                 G GGQ VNT  +AV++TH+PTG V++  + R   KN   A+  ++  L      
Sbjct: 27  KYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDRQING 86

Query: 288 -----ELQKREEIANIGESSKTEIGWGRQIRSYV 316
                E  KR +IA   +S+K  +   ++  SY 
Sbjct: 87  ENCYEEQLKRLQIAKEEKSNKRRVQARKEKESYK 120


>gi|703443|gb|AAB02290.1| release factor 1 [Streptococcus gordonii]
          Length = 67

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 20/60 (33%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7  LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66


>gi|302024126|ref|ZP_07249337.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
          Length = 50

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
            +P  W + + A+   +E   L N      ++ D   ++ ILL+   
Sbjct: 1  MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLA 48


>gi|254498257|ref|ZP_05110999.1| peptide chain release factor [Legionella drancourtii LLAP12]
 gi|254352506|gb|EET11299.1| peptide chain release factor [Legionella drancourtii LLAP12]
          Length = 135

 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 39/78 (50%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           + I+E          SG GGQ ++ T S V + H+P+G+ ++CQ+ RS+  N+  A   L
Sbjct: 17  LHINEDSLIEKFIIGSGKGGQKLHKTASTVYLKHVPSGIEIKCQESRSREGNRYFARVRL 76

Query: 281 RAKLYELELQKREEIANI 298
             K + +   ++ +    
Sbjct: 77  CEKYHAIISDEKTKEQQR 94


>gi|254568480|ref|XP_002491350.1| hypothetical protein [Pichia pastoris GS115]
 gi|238031147|emb|CAY69070.1| Hypothetical protein PAS_chr2-1_0443 [Pichia pastoris GS115]
          Length = 168

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+S V++THI TG+VV  Q  RS+ +N+  A  +L  KL +LE         + E  
Sbjct: 49  INKTNSKVQLTHIATGIVVTSQATRSREQNRKIAREILALKLQDLEDPANSRQRIVIERQ 108

Query: 303 KTEIGWGRQIRS 314
           K       + R+
Sbjct: 109 KMVKARKNK-RT 119


>gi|195351213|ref|XP_002042130.1| GM10246 [Drosophila sechellia]
 gi|194123954|gb|EDW45997.1| GM10246 [Drosophila sechellia]
          Length = 171

 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 48  ERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
               L+  +S +++   ++  +     + E   +ED   +++E ++    +  + +    
Sbjct: 58  RLAQLEGVVSALEQRRVLERHITSAKDM-EAEKDEDMRELMREENEVYVDLLGKQDQALL 116

Query: 105 ESLLSGEADSNDAYLE--VHAGAGGTESQDWANMLLRMYT 142
           + LL+   D     L   ++AGAGG E+  +A  L  MYT
Sbjct: 117 QELLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYT 156


>gi|289663375|ref|ZP_06484956.1| peptide chain release factor 2 [Xanthomonas campestris pv.
          vasculorum NCPPB702]
 gi|289668831|ref|ZP_06489906.1| peptide chain release factor 2 [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 48

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
          W +   A+ L RER  L+  +  I ++   L D   LLELA  E D 
Sbjct: 2  WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDE 48


>gi|95930653|ref|ZP_01313387.1| ABC transporter related [Desulfuromonas acetoxidans DSM 684]
 gi|95133305|gb|EAT14970.1| ABC transporter related [Desulfuromonas acetoxidans DSM 684]
          Length = 646

 Score = 46.9 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKE 61
           L +QL  L    D + A    + L  +  DP L+Q+  +   L  + +    A+    ++
Sbjct: 576 LEKQLQQLEA--DIETAETHQADLEQQLADPELYQDQAQFSQLSDQHRDQAEALEGMYEQ 633

Query: 62  IQDRLCDNLILLE 74
            +    D   L E
Sbjct: 634 WEKLQHDLTTLAE 646


>gi|260792422|ref|XP_002591214.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae]
 gi|229276417|gb|EEN47225.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae]
          Length = 99

 Score = 46.9 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
              ++A+LY+++L ++     +    +        +IR+Y       V D R  +   + 
Sbjct: 1   MTTIQARLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNF-TQDRVTDHRAGVNMFNL 59

Query: 336 SDVLDGD--LDDFM 347
            D L G   LD+ +
Sbjct: 60  QDFLLGGDRLDEMI 73


>gi|320352217|ref|YP_004193556.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
 gi|320120719|gb|ADW16265.1| ABC transporter related protein [Desulfobulbus propionicus DSM
           2032]
          Length = 666

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 4/59 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCDNL 70
            +    R + L     DP L+ +        +E     +HL+ A    +E Q  +    
Sbjct: 600 IERYESRKAELEALMADPDLYGDQERWSATSKEYGQVERHLERAYQRWEEAQQAIEAIE 658


>gi|56784339|dbj|BAD82360.1| unknown protein [Oryza sativa Japonica Group]
 gi|56785244|dbj|BAD82132.1| unknown protein [Oryza sativa Japonica Group]
          Length = 137

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
              C + T++ASG GGQH N  +SAVR+ H PTG++ Q
Sbjct: 83  MGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQ 120


>gi|281358821|ref|ZP_06245294.1| Class I peptide chain release factor [Victivallis vadensis ATCC
           BAA-548]
 gi|281314710|gb|EFA98750.1| Class I peptide chain release factor [Victivallis vadensis ATCC
           BAA-548]
          Length = 160

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 32/59 (54%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + C ++ ++ SG GGQ  N T SAVR+      +      ERSQH+N+A A   LR  L
Sbjct: 17  ACCELEFFKGSGNGGQKRNKTSSAVRVHLKAFDLSASDCTERSQHRNRANALAKLRHSL 75


>gi|297263790|ref|XP_001097466.2| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Macaca
           mulatta]
 gi|297263792|ref|XP_002798863.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Macaca
           mulatta]
          Length = 122

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+    R
Sbjct: 44  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKVDNRR 102


>gi|328352136|emb|CCA38535.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435]
          Length = 147

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%)

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+S V++THI TG+VV  Q  RS+ +N+  A  +L  KL +LE         + E  
Sbjct: 28  INKTNSKVQLTHIATGIVVTSQATRSREQNRKIAREILALKLQDLEDPANSRQRIVIERQ 87

Query: 303 KTEIGWGRQ 311
           K       +
Sbjct: 88  KMVKARKNK 96


>gi|156098522|ref|XP_001615293.1| Immature colon carcinoma transcript 1 [Plasmodium vivax SaI-1]
 gi|148804167|gb|EDL45566.1| Immature colon carcinoma transcript 1, putative [Plasmodium vivax]
          Length = 153

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 25/121 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------HIPT---------------- 257
            EI        T R+SG GGQ VN  ++ V++         IP                 
Sbjct: 12  FEIPFGQIEKVTARSSGPGGQSVNKAETKVQLRFNVDAAKWIPPAVRDNLKKVHKNRLNK 71

Query: 258 --GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
              ++V+C++  SQ  N     + LRA L E E  K +      +     I    QI+ Y
Sbjct: 72  NNELIVECEETSSQISNYKICADKLRALLEEAENYKEKTKYTSVKDFIHLIKTDEQIKRY 131

Query: 316 V 316
            
Sbjct: 132 K 132


>gi|72390633|ref|XP_845611.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62359860|gb|AAX80288.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802146|gb|AAZ12052.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|261329018|emb|CBH11996.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 469

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 20/181 (11%)

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+       +    RW                      +A    +  + Y  +   + 
Sbjct: 27  GAETCGAFTAAIVCPQRWCAALG-------ERRLSRRRYSAANTKGRCKHVYNIINSLKL 79

Query: 187 VHRLVRISPYDSNSRR-------------HTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           V + V  S +D    R                 S + V+     + +    E+D   D+ 
Sbjct: 80  VPKAVLASEFDKLHPRDKLDVKRALVRRRSRRSSCLPVFKSALFNRKYFFREADLTEDST 139

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
              G GGQ  N       + H+PTG+ V+  +  S   N+  A ++L  +L E  L  + 
Sbjct: 140 LGRGPGGQATNRRKQTAIVKHVPTGITVKFSKFPSYWLNRRAARDVLNLQLEERMLGSKS 199

Query: 294 E 294
           E
Sbjct: 200 E 200


>gi|313230025|emb|CBY07730.1| unnamed protein product [Oikopleura dioica]
          Length = 336

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 94/282 (33%), Gaps = 38/282 (13%)

Query: 77  LEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEA--DS-NDAYLEVHAGA--GGT 128
             E D  I +   + +Q+ + E+     + F SL+S E   D        +H     GG 
Sbjct: 38  ENEKDAEIRELFEEEIQKTENELAVNTKELFSSLISSEETVDPLQTVIFSIHTVKQEGGL 97

Query: 129 ESQDWANMLLRMYTRWAEKRKF------KTEALEIHDGEEAGIKS-ATLLIKGPNAYGWL 181
           ES      +   Y ++ E   +      +      +   +          ++G  A   L
Sbjct: 98  ESGITVRQMAEFYEKFFEFYDWQILSYKEVPYASSNTKTQGDPMELVQFCVQGEGALDIL 157

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSF-----SSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
             E+G+H+  R S +++    +  F         +        EI+           R  
Sbjct: 158 AKEKGIHQHKRQS-FNTKIGINLKFSVAVHCRPQIMKQRRSKDEIKTDLRFISTRGIRGG 216

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
            A G         + I     G+ +      ++ +N  +A +++  K+ +LE +      
Sbjct: 217 NADGG----VRIRLNIHDPVYGLHLTYDGVGNKQQNMKEAVDLMTKKIRKLEERDFLNTK 272

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
              E   ++    + IR+Y         D  TN   +S S V
Sbjct: 273 AELEGDISQ----KMIRTY---------DHTTNKVISSNSTV 301


>gi|269925711|ref|YP_003322334.1| ABC transporter related protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789371|gb|ACZ41512.1| ABC transporter related protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 767

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 6/104 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  Q+  L    +  +   RL  L    ED  L+Q+      L+ E   L   +  + 
Sbjct: 564 LRLRAQVQDLET--EISDTEDRLQELQAHLEDDSLYQDREHYYSLLSEYGELQGRLQDLN 621

Query: 61  EIQDRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEY 101
           E  ++    L  LE+   A  E D  +  E    L+ +K  +E 
Sbjct: 622 ERWEKKASLLEQLEMLGSASFEPD-ELEPEAQRRLRELKNALED 664


>gi|170575451|ref|XP_001893249.1| hypothetical protein Bm1_08890 [Brugia malayi]
 gi|158600871|gb|EDP37928.1| hypothetical protein Bm1_08890 [Brugia malayi]
          Length = 116

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 11/83 (13%)

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL------ 284
                 G GGQ VN T +AV I H+PTGVVV+  Q R   +N   A   L+  +      
Sbjct: 7   KVISGWGPGGQKVNMTKNAVTIKHVPTGVVVRVHQSRLLQENIEIALERLKHAVDRHLNG 66

Query: 285 -----YELELQKREEIANIGESS 302
                 +LE  +RE  A      
Sbjct: 67  ENSYDAQLERMERERGAKNKRKR 89


>gi|84999574|ref|XP_954508.1| Dead/deah box RNA helicase [Theileria annulata]
 gi|65305506|emb|CAI73831.1| Dead/deah box RNA helicase, putative [Theileria annulata]
          Length = 988

 Score = 46.5 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-IPTGVV---VQCQQERSQHKNKAQ 275
           EI    S       +ASG GGQ +N +   V++ +  P+G +   ++C++ R+   N+ +
Sbjct: 83  EISEPNSKLEEKYIKASGPGGQKINKSAICVQLNYSNPSGSIKINIKCKKHRTLILNRIE 142

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTE 305
           A  +L AK+ E++ ++  EI          
Sbjct: 143 ATEILIAKINEIKEKEIMEIKRENFKEAMR 172


>gi|323249067|gb|EGA32987.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 56

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + R+Y   P   V D R N+      + ++G LD  ++  +
Sbjct: 1   DRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIEPIV 41


>gi|298674540|ref|YP_003726290.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
 gi|298287528|gb|ADI73494.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
          Length = 880

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 15/107 (14%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDNLILLELALE 78
            +RL  L  +        N+ E    +RE+ Q     IS ++  ++++ D    LE A  
Sbjct: 440 KERLESLEKELS------NIREQSKTLREQWQKEKEIISELRSFKEQIEDTKTQLERAEN 493

Query: 79  EDDCSILQE--------TSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           ++D  +                +  + E+   Q E LL  E D  D 
Sbjct: 494 DNDFELASRLKYGTLIPLQRQYEEKEEELHQMQDEMLLREEVDEEDI 540


>gi|258616657|ref|ZP_05714427.1| Peptide chain release factor 2 (RF-2) [Enterococcus faecium DO]
          Length = 63

 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 26/63 (41%)

Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            +P  W +   A+ ++ E             + + L +  +++E+  EE D ++ +E  
Sbjct: 1  MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60

Query: 90 DNL 92
            +
Sbjct: 61 TRI 63


>gi|119946803|ref|YP_944483.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
 gi|119865407|gb|ABM04884.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
          Length = 638

 Score = 46.1 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKE 61
            +QL+    L   +   Q+L  +  +  DP L+++  +A+   L++++  L  ++    E
Sbjct: 561 KKQLSSSEKLM--EKLSQQLEEIEKQLADPALYEHAQKARLTELLKQQGELKESLE---E 615

Query: 62  IQDRLCDNLILLELALEEDDC 82
            +    D    +EL   E + 
Sbjct: 616 AEMAWMDAQEKIELMEAEFEE 636


>gi|312084786|ref|XP_003144416.1| hypothetical protein LOAG_08838 [Loa loa]
 gi|307760418|gb|EFO19652.1| hypothetical protein LOAG_08838 [Loa loa]
          Length = 140

 Score = 46.1 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL------ 284
                 G GGQ VN T +AV I H+PTG+VV+  Q R   +N   A   L+  +      
Sbjct: 30  KIISGWGPGGQKVNMTRNAVTIKHVPTGIVVRVHQSRLLQENIEIAQERLKHAVDRYLNG 89

Query: 285 ---YELELQKREEIANIGESSKTEI 306
              Y+ +L++ E         K  +
Sbjct: 90  ENSYDAQLERMERERGAMNKRKKAV 114


>gi|221056078|ref|XP_002259177.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
 gi|193809248|emb|CAQ39950.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 153

 Score = 46.1 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 25/121 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------HIPT---------------- 257
            EI  S  +  T R+SG GGQ VN  +S V++         IP+                
Sbjct: 12  FEIPFSQIQKVTARSSGPGGQSVNKAESKVQLRFNVDTAKWIPSTVKDNLKKIHKNKLNK 71

Query: 258 --GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
              ++++C++  SQ  N     + LRA L E E  K +      +     I    QI+ Y
Sbjct: 72  NNELIIECEETPSQISNYKICTDKLRALLEEAENYKEKTKHTSVKDFIHLIKTDEQIKRY 131

Query: 316 V 316
            
Sbjct: 132 K 132


>gi|297569022|ref|YP_003690366.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924937|gb|ADH85747.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 668

 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLILL 73
            +   QR   L     DP ++    E   L +E   L+  +     + +    +   +L
Sbjct: 607 VEKQEQRKDELEKLLADPEIYHRQEEFAELSKEYAELERRLERLYDQWEKVNSEIEEIL 665


>gi|253742520|gb|EES99348.1| Coiled-coil protein [Giardia intestinalis ATCC 50581]
          Length = 2094

 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 25/176 (14%)

Query: 16  WDNAVQRLSFLNTKTEDPH--LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D   QR+  L  +  +    + +   E   L+ +   L  A   +      L + +  L
Sbjct: 307 IDELNQRIEELLRRIAEQDDTIVEQQKEIADLLDQLASLKKAYDRLDNDHVALQNTMDAL 366

Query: 74  ELALEE---DDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVH----- 122
            L   E   +   + ++ +D L+RI   + E +  + + +  G+ D N + ++++     
Sbjct: 367 TLGKTESAAEAEKLKRQIADLLKRIAAAEAERDKYKQQVM-KGDPDRNVSLVDINNNTVK 425

Query: 123 ----AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
                G+ G    D  ++       + E   F         G + G     +  KG
Sbjct: 426 SARLPGSAGDNGFDTKSLFSAKQLLY-ELTGFNL------LGYQDGFTETYVSSKG 474


>gi|296101362|ref|YP_003611508.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055821|gb|ADF60559.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 140

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 24/118 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN   +A+ +                      H+ 
Sbjct: 5   SRNVSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKESLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           T    +V++ Q+ RSQ  N+  A   L A + EL   ++   A     +  E     +
Sbjct: 65  TSDGVIVIKAQEYRSQELNREAAMARLVAVIKELTTVQKSRRATRPTRASKERRLSSK 122


>gi|154342057|ref|XP_001566980.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064305|emb|CAM40506.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 464

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 5/173 (2%)

Query: 160 GEEAGIKSATLLIKGPNA---YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           GE   +  A   +   +A   Y  L     +  +  +S      +     S +  Y  V 
Sbjct: 54  GEAKELVHAMKKMSAQDAKALYDALHPRVRLDIMRLLSEKRRKRQSDRVTSKLTKYYSVP 113

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
                   E D    +    G GGQ  N       + H+P+G++V+  +  S   N+  A
Sbjct: 114 FEKNYFFREEDVEEMSTLGKGPGGQATNRRMQTAIVKHVPSGLIVKFSRFPSLWLNRRAA 173

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM--VKDLR 327
             +L  +L E  L    ++  I  + +      ++   Y+ +       KD R
Sbjct: 174 RELLSLRLEEHLLGPTSQLGKIRVARERRRRRQQRTLKYLSEKGARLQTKDTR 226


>gi|254443205|ref|ZP_05056681.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198257513|gb|EDY81821.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 644

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 21/59 (35%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
             +   + S    +  DP  +++  +++ ++         I    E+   L D +   E
Sbjct: 586 IADLESQQSEYEKQMADPDFYKDPKKSQEVLTTYDDNKAKIEAAYELWSDLSDQIAAAE 644


>gi|94263448|ref|ZP_01287261.1| ABC transporter related [delta proteobacterium MLMS-1]
 gi|93456178|gb|EAT06317.1| ABC transporter related [delta proteobacterium MLMS-1]
          Length = 682

 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 4/56 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLC 67
            D    R + L  +  DP  +    +   L +E       L++      ++Q  L 
Sbjct: 622 VDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELE 677


>gi|94269500|ref|ZP_01291480.1| ABC transporter related [delta proteobacterium MLMS-1]
 gi|93451197|gb|EAT02108.1| ABC transporter related [delta proteobacterium MLMS-1]
          Length = 301

 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 4/56 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLC 67
            D    R + L  +  DP  +    +   L +E       L++      ++Q  L 
Sbjct: 241 VDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELE 296


>gi|18089197|gb|AAH20885.1| C12orf65 protein [Homo sapiens]
 gi|119618801|gb|EAW98395.1| hypothetical protein FLJ38663, isoform CRA_a [Homo sapiens]
          Length = 119

 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+    R
Sbjct: 41  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKVDHRR 99


>gi|71032197|ref|XP_765740.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352697|gb|EAN33457.1| hypothetical protein TP01_0213 [Theileria parva]
          Length = 215

 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 8/122 (6%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-IPTGVV---VQCQQERSQHKNKAQ 275
           EI    S       +ASG GGQ +N +   V++ +  P+G +   ++ ++ R+   N+ +
Sbjct: 90  EISEPNSKLEEKYIKASGPGGQKINKSAICVQLNYSNPSGSIKINIKTKKHRTLILNRIE 149

Query: 276 AWNMLRAKLYEL---ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ-MVKDLRTNIE 331
           A  +L AKL E+   E+   +           E+    + R  V +  +  +K +R+  +
Sbjct: 150 ATEILIAKLKEIKDKEIMDEKREQFKESMRNRELSEKSKYRRMVYKKNRSFIKKMRSTAK 209

Query: 332 KT 333
             
Sbjct: 210 IH 211


>gi|255529922|ref|YP_003090294.1| hypothetical protein Phep_0006 [Pedobacter heparinus DSM 2366]
 gi|255342906|gb|ACU02232.1| conserved hypothetical protein [Pedobacter heparinus DSM 2366]
          Length = 1102

 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 50/126 (39%), Gaps = 7/126 (5%)

Query: 2   KLSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKM-LMRERQHLD---NAI 56
           +L  +   L   F D    +++L   N + E P+ +QN  +    + ++++  +   +  
Sbjct: 690 ELKNKQQQLSESFNDLKKEMKKLDEKNQQLERPNPFQNPEKETKDIEQQQKGAEVQLDKN 749

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
              K  + +      + +LAL      + QE+++    +  +   +  E+LL    D   
Sbjct: 750 DRKKAAEQQQKAADQMEQLAL--KMSEMQQESAEMENNLNAKELRQLLENLLKTSFDQEK 807

Query: 117 AYLEVH 122
             L + 
Sbjct: 808 VMLNLR 813


>gi|33859720|ref|NP_082586.1| probable peptide chain release factor C12orf65 homolog,
           mitochondrial isoform b [Mus musculus]
 gi|26333153|dbj|BAC30294.1| unnamed protein product [Mus musculus]
 gi|148687648|gb|EDL19595.1| RIKEN cDNA 2810006K23, isoform CRA_a [Mus musculus]
          Length = 128

 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 30/57 (52%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+
Sbjct: 41  ASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVK 97


>gi|15642858|ref|NP_227899.1| flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
 gi|4980572|gb|AAD35177.1|AE001695_3 flagellar hook-associated protein 1 [Thermotoga maritima MSB8]
          Length = 858

 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDP----------HLWQNVIEAKMLMRE---RQHLDNAISFIKEI 62
           WD  +  L F+     +P          + W      K +M +          +S  +++
Sbjct: 97  WDTVLSNLHFIEQLLAEPGEDGIRSLVDNFWN---AFKEVMSDPSSTASKAEVVSRAQQM 153

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGE----ADSN 115
             ++ D    LE   E+ D  I+Q   E +  ++R+       +   +L+       D  
Sbjct: 154 VSQIKDLYGRLEQLREDIDAEIVQRVSEINQMIKRLADLNNKIRTSMMLNSPPNDLLDER 213

Query: 116 DAYLE 120
           D  L+
Sbjct: 214 DRILD 218


>gi|77415301|ref|ZP_00791262.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|77158648|gb|EAO69998.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
          Length = 53

 Score = 44.6 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 18/53 (33%)

Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
          R   L     DP +  +      L RE  +    ++  +E +  + +     E
Sbjct: 1  RYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVISNISDAEE 53


>gi|148269976|ref|YP_001244436.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
           RKU-1]
 gi|147735520|gb|ABQ46860.1| flagellar hook-associated protein FlgK [Thermotoga petrophila
           RKU-1]
          Length = 858

 Score = 44.6 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDP----------HLWQNVIEAKMLMRE---RQHLDNAISFIKEI 62
           WD  +  L F+     +P          + W      K +M +          +S  +++
Sbjct: 97  WDTVLSNLHFIEQLLAEPGEDGVRSLVDNFWN---AFKEVMSDPSSTASKAEVVSRAQQM 153

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGE----ADSN 115
             ++ D    LE   E+ D  I+Q   E +  ++R+       +   +L+       D  
Sbjct: 154 VSQIKDLYGRLEQLREDIDDEIVQRVSEINQMIKRLADLNNKIRTSMMLNSPPNDLLDER 213

Query: 116 DAYLE 120
           D  L+
Sbjct: 214 DRILD 218


>gi|281412143|ref|YP_003346222.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
           RKU-10]
 gi|281373246|gb|ADA66808.1| flagellar hook-associated protein FlgK [Thermotoga naphthophila
           RKU-10]
          Length = 858

 Score = 44.6 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDP----------HLWQNVIEAKMLMRE---RQHLDNAISFIKEI 62
           WD  +  L F+     +P          + W      K +M +          +S  +++
Sbjct: 97  WDTVLSNLHFIEQLLAEPGEDGIRSLVDNFWN---AFKEVMSDPSSTASKAEVVSRAQQM 153

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGE----ADSN 115
             ++ D    LE   E+ D  I+Q   E +  ++R+       +   +L+       D  
Sbjct: 154 VSQIKDLYGRLEQLREDIDDEIVQRVSEINQMIKRLADLNNKIRTSMMLNSPPNDLLDER 213

Query: 116 DAYLE 120
           D  L+
Sbjct: 214 DRILD 218


>gi|221052668|ref|XP_002261057.1| Polypeptide chain release factor 2 [Plasmodium knowlesi strain H]
 gi|194247061|emb|CAQ38245.1| Polypeptide chain release factor 2, putative [Plasmodium knowlesi
           strain H]
          Length = 186

 Score = 44.6 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP---TGVVVQCQQERSQHKNKAQAW 277
           I +   D      + +G GGQ VN T++ V I +       +V++C + R   KN+  A 
Sbjct: 62  IGVLPKDIEETFVKGTGKGGQKVNKTNNCVMIKYDSGNGEKIVIKCHKYRCLQKNRIYAR 121

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEI 306
            +L  K+  +     + I +  E  K  +
Sbjct: 122 ELLYDKITSMRENLEDAIIHEIEKEKRRV 150


>gi|170288661|ref|YP_001738899.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
 gi|170176164|gb|ACB09216.1| flagellar hook-associated protein FlgK [Thermotoga sp. RQ2]
          Length = 858

 Score = 44.6 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDP----------HLWQNVIEAKMLMRE---RQHLDNAISFIKEI 62
           WD  +  L F+     +P          + W      K +M +          +S  +++
Sbjct: 97  WDTVLSNLHFIEQLLAEPGEDGIRSLVDNFWN---AFKEVMSDPSSTASKAEVVSRAQQM 153

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGE----ADSN 115
             ++ D    LE   E+ D  I+Q   E +  ++R+       +   +L+       D  
Sbjct: 154 VSQIKDLYGRLEQLREDIDDEIVQRVSEINQMIKRLADLNNKIRTSMMLNSPPNDLLDER 213

Query: 116 DAYLE 120
           D  L+
Sbjct: 214 DRILD 218


>gi|154290812|ref|XP_001545996.1| hypothetical protein BC1G_15445 [Botryotinia fuckeliana B05.10]
 gi|150847396|gb|EDN22589.1| hypothetical protein BC1G_15445 [Botryotinia fuckeliana B05.10]
          Length = 168

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +++ HIPTG+V++ Q  RS+ +N+  A  ML  +L  LE  K   +A +GE+ K      
Sbjct: 44  IQLKHIPTGMVLKVQATRSRTQNRKIARQMLAERLELLEKGKESRVAIVGETKKKRKSSA 103

Query: 310 RQ--IRSYVL 317
            +   R Y L
Sbjct: 104 VKKSKRKYRL 113


>gi|148988471|ref|ZP_01819918.1| peptide chain release factor 1 [Streptococcus pneumoniae
          SP6-BS73]
 gi|147926152|gb|EDK77226.1| peptide chain release factor 1 [Streptococcus pneumoniae
          SP6-BS73]
          Length = 67

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 17/55 (30%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
                R   L     DP +  +      L +E     + +   +E +  L +N 
Sbjct: 7  LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNNR 61


>gi|157872880|ref|XP_001684964.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68128034|emb|CAJ06865.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 456

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E D   ++    G GGQ  N       + H+P+G++V+  +  S   N+  A  +L  +
Sbjct: 116 REEDVEEESTLGRGPGGQATNRRMQTAIVKHVPSGLIVKFSRFPSLWLNRRAARELLNLR 175

Query: 284 LYEL 287
           L E 
Sbjct: 176 LEEH 179


>gi|304396667|ref|ZP_07378548.1| Class I peptide chain release factor [Pantoea sp. aB]
 gi|304356176|gb|EFM20542.1| Class I peptide chain release factor [Pantoea sp. aB]
          Length = 136

 Score = 44.2 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           +EI ES+  +   RA GAGGQHVN   +A+ +                      H+ TG 
Sbjct: 8   VEIPESEIELTAIRAQGAGGQHVNKASTAIHLRFDIAASSLPAFYKERLLTASHHLITGD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             VV++ Q+ RSQ  N+  A   L   + EL   ++   A
Sbjct: 68  GVVVIKAQEYRSQEMNREAALQRLVNLIQELSTVEKARRA 107


>gi|168011647|ref|XP_001758514.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690124|gb|EDQ76492.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 282

 Score = 44.2 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 14/100 (14%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           CR++T R+SG GGQH NTT+SA               ++RSQHKN+A+A+  LR  +   
Sbjct: 132 CRVETLRSSGPGGQHRNTTESAA-------------AEDRSQHKNRAKAFKRLREVIALT 178

Query: 288 ELQKREEIANIGESSKTEIGWGR-QIRSYVLQPYQMVKDL 326
             +  E            I     Q RS      Q+  + 
Sbjct: 179 VRRPLELKDYKAPPELMRILPSSPQTRSRRGGGQQIGSNH 218


>gi|308048193|ref|YP_003911759.1| class I peptide chain release factor [Ferrimonas balearica DSM
           9799]
 gi|307630383|gb|ADN74685.1| Class I peptide chain release factor [Ferrimonas balearica DSM
           9799]
          Length = 141

 Score = 44.2 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 25/118 (21%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HI---P 256
           + I  ++      RASG GGQHVN T +A+ +                      H    P
Sbjct: 8   VSIPANELEFQMIRASGPGGQHVNKTSTAIMLIFDVKHSTALPDHYKSRILARAHPNLTP 67

Query: 257 TGV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
            G  +++ QQ RSQ  N+  A   L+A +    + +++ IA     +  +     + R
Sbjct: 68  GGKIIIKAQQYRSQEMNRQDALERLKAMIDAAMVVQKKRIATKPTRASQKRRVDSKKR 125


>gi|322493744|emb|CBZ29034.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 456

 Score = 44.2 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E D   ++    G GGQ  N       + H+P+G++V+  +  S   N+  A  +L  +
Sbjct: 116 REEDVEEESTLGRGPGGQATNRRMQTAIVKHVPSGLIVKFSRFPSLWLNRRAARELLNLR 175

Query: 284 LYEL 287
           L E 
Sbjct: 176 LEEH 179


>gi|146093690|ref|XP_001466956.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134071320|emb|CAM70006.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 202

 Score = 44.2 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 40/121 (33%), Gaps = 29/121 (23%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           S  +     HTS      Y  + +   I I      I T R SG GGQ  N++ + V + 
Sbjct: 39  SLTEGARAAHTSSKEAGYYR-LQNPKHINIDPCVYEIRTMRGSGPGGQGTNSSSNKVELR 97

Query: 254 HIP----------------------------TGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
                                          T +VV C + RS  +NK      L+  L+
Sbjct: 98  ADMELLSEFFDDELLAALRRHEAGGALTSDGTTIVVSCHEHRSALQNKEGCLRKLQTLLH 157

Query: 286 E 286
           +
Sbjct: 158 K 158


>gi|308185762|ref|YP_003929893.1| hypothetical protein Pvag_0224 [Pantoea vagans C9-1]
 gi|308056272|gb|ADO08444.1| Uncharacterized protein yaeJ [Pantoea vagans C9-1]
          Length = 136

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTGV 259
           +EI ES+  +   RA GAGGQHVN   +A+ +                      H+ TG 
Sbjct: 8   VEIPESEIELTAIRAQGAGGQHVNKASTAIHLRFDIAASSLPAFYKERLLTASHHLITGE 67

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
              V++ Q+ RSQ  N+  A   L   + EL   ++   A
Sbjct: 68  GVVVIKAQEYRSQEMNREAALQRLVNLIQELSTVEKARRA 107


>gi|325278846|ref|YP_004251388.1| ATP-binding cassette protein, ChvD family [Odoribacter splanchnicus
           DSM 20712]
 gi|324310655|gb|ADY31208.1| ATP-binding cassette protein, ChvD family [Odoribacter splanchnicus
           DSM 20712]
          Length = 562

 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 16/137 (11%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE--IQDRLCD 68
            G+ D  +A++    +N K  DP + +N  +   L+  +  L + I       +  RL  
Sbjct: 95  EGVQDIVDALKEFEEVNQKFGDPEVLENPDKLNALINRQAELQDKIDATDAWNLDSRLER 154

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +  L    E+     L         +   +  +    LL    +  DA           
Sbjct: 155 AMDALRCPPEDQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLDA----------- 203

Query: 129 ESQDWANMLLRMYTRWA 145
           ES DW   L +   ++A
Sbjct: 204 ESIDW---LEQHLQQYA 217


>gi|295098680|emb|CBK87770.1| Protein chain release factor B [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 138

 Score = 43.8 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 24/118 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN   +A+ +                      H+ 
Sbjct: 5   SRNVSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKESLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           T    +V++ Q+ RSQ  N+  A   L A + EL   ++   A     +  E     +
Sbjct: 65  TSEGVMVIKAQEYRSQELNREAAIARLVAVIKELTAVQKSRRATRPTRASKERRLSSK 122


>gi|212703970|ref|ZP_03312098.1| hypothetical protein DESPIG_02023 [Desulfovibrio piger ATCC 29098]
 gi|212672673|gb|EEB33156.1| hypothetical protein DESPIG_02023 [Desulfovibrio piger ATCC 29098]
          Length = 668

 Score = 43.8 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   L G  + + A+   S + T   DP ++ +   +  L++    L +    + E 
Sbjct: 586 LQQKYAALEG--ELEKAMNEQSDVETLLADPAVYADGARSTELLKRFNDLRDLTERLMED 643

Query: 63  QDRLCDNLILLELALEEDD 81
              L + +  +E    + D
Sbjct: 644 MAALEEQIAAIEAKRADID 662


>gi|154283571|ref|XP_001542581.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150410761|gb|EDN06149.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 747

 Score = 43.8 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 40/195 (20%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTED--PHLWQNVIEA----------------- 42
           +  + +  L G  D      +L   N K          +   A                 
Sbjct: 279 EFQKSITELEG-LDALQVRAQLREKNEKIAALTAEF--DSHRADFRSTLDTLEVAAAETE 335

Query: 43  -------KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQ 93
                  + LM+  + L +    ++ +  +L     L+    +  ED      E    ++
Sbjct: 336 RVYERRLEELMQANRELQDRGEDVETVARQLKQLEELVSELEDGLEDARRGEAEARGEVE 395

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            ++ EVE  + E  L  E + ++    V+ GAGG +    +  L +      E R  K  
Sbjct: 396 FLRGEVERTRLE--LKQEREKSN---SVYKGAGG-DGHASSKDLDQKDD---EIRGLKAI 446

Query: 154 ALEIHDGEEAGIKSA 168
              +  GE  G+   
Sbjct: 447 IHSLSRGEPTGLTHI 461


>gi|167525375|ref|XP_001747022.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774317|gb|EDQ87946.1| predicted protein [Monosiga brevicollis MX1]
          Length = 238

 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 25/104 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------HIPTGV---------------- 259
           I     +I   R+SG GGQ+VN  ++   +         +PT V                
Sbjct: 69  IPSDALQIQFARSSGPGGQNVNKVNTKADVRFHVASAEWLPTEVREKLQEQQQSRINKNG 128

Query: 260 --VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
             VV     RSQ KN   A   +     E    +RE  A   + 
Sbjct: 129 ELVVAVSDTRSQKKNLQLAMQRILDMCREASAIERETSAETKQR 172


>gi|308481019|ref|XP_003102715.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
 gi|308260801|gb|EFP04754.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
          Length = 162

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 14/80 (17%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV--------------QCQQER 267
           E+ + DC        G GGQ VNT  +AV++TH+PTG V+              Q  + R
Sbjct: 26  EVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVLRFFFTISFNFHQVHESR 85

Query: 268 SQHKNKAQAWNMLRAKLYEL 287
              KN   A+  ++  L   
Sbjct: 86  LLPKNIEIAFERMKFVLDRQ 105


>gi|218260605|ref|ZP_03475832.1| hypothetical protein PRABACTJOHN_01496 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224451|gb|EEC97101.1| hypothetical protein PRABACTJOHN_01496 [Parabacteroides johnsonii
           DSM 18315]
          Length = 562

 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 16/137 (11%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE--IQDRLCD 68
            G+ D  + ++    +N K  DP + ++  +   L+  +  L + I       +  RL  
Sbjct: 95  EGVQDIVDTLKEYEEVNEKFGDPEVLEDPDKMDALINRQAELQDKIDATDAWNLDSRLER 154

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            +  L    E+     L         +   +  +    LL    +  DA           
Sbjct: 155 AMDALRCPPEDQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLDA----------- 203

Query: 129 ESQDWANMLLRMYTRWA 145
           ES DW   L +   ++A
Sbjct: 204 ESIDW---LEQHLQQYA 217


>gi|146094206|ref|XP_001467214.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134071578|emb|CAM70267.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 456

 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E D    +    G GGQ  N       + H+P+G++V+  +  S   N+  A  +L  +
Sbjct: 116 REEDVEEKSTLGRGPGGQATNRRMQTAIVKHVPSGLIVKFSRFPSLWLNRRAARELLNLR 175

Query: 284 LYEL 287
           L E 
Sbjct: 176 LEEH 179


>gi|322501302|emb|CBZ36381.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 456

 Score = 43.4 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E D    +    G GGQ  N       + H+P+G++V+  +  S   N+  A  +L  +
Sbjct: 116 REEDVEEKSTLGRGPGGQATNRRMQTAIVKHVPSGLIVKFSRFPSLWLNRRAARELLNLR 175

Query: 284 LYEL 287
           L E 
Sbjct: 176 LEEH 179


>gi|149198864|ref|ZP_01875906.1| peptidyl-tRNA hydrolase domain protein [Lentisphaera araneosa
           HTCC2155]
 gi|149138062|gb|EDM26473.1| peptidyl-tRNA hydrolase domain protein [Lentisphaera araneosa
           HTCC2155]
          Length = 157

 Score = 43.4 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             C  D ++ASG GGQ  N T SAVR+ H  T +     ++R Q  NK +A   LR +L 
Sbjct: 16  KQCTQDFFKASGPGGQKKNKTSSAVRLIHKETDIQASASEDRQQSVNKKRALRRLRLELA 75

Query: 286 ELELQKREE 294
               ++ E 
Sbjct: 76  LQMREEYEA 84


>gi|157872305|ref|XP_001684701.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68127771|emb|CAJ06120.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 166

 Score = 43.4 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 41/121 (33%), Gaps = 29/121 (23%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR-- 251
           S  +     HTS      Y  +     I I      I T R SG GGQ  N++ + V   
Sbjct: 3   SLTEGARASHTSSKEAGYYR-LQSPKHINIDPCVYEIRTMRGSGPGGQGTNSSSNKVELR 61

Query: 252 --------------------------ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
                                     +T+  T +VV C + RS  +NK      L+  L+
Sbjct: 62  ADMELLSEFFDEELLAALRRHEAGGALTNDGTTIVVSCHEHRSALQNKEGCLRKLQTLLH 121

Query: 286 E 286
           +
Sbjct: 122 K 122


>gi|322823188|gb|EFZ28993.1| hypothetical protein TCSYLVIO_4766 [Trypanosoma cruzi]
          Length = 486

 Score = 43.4 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 12/109 (11%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E D    +    G GGQ  N       + H P+G+VV+  +  S   N+  A  +L  +
Sbjct: 130 REEDLCEQSTLGRGPGGQATNRRMQTAIVKHEPSGIVVKFSKFPSYWLNRKAAREILNLR 189

Query: 284 LYELELQKREEIA-----------NIGESSKTEIGWGRQIRSYVLQPYQ 321
           L E  L     IA              ++ +  +  G  IR+  +   +
Sbjct: 190 LEEHLLGPGSRIARIKRREVRRRLQQIQTREKMVEKGN-IRAAKMSQQR 237


>gi|322501056|emb|CBZ36133.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 202

 Score = 43.4 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 35/103 (33%), Gaps = 28/103 (27%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------------- 256
           Y  + +   I I      I T R SG GGQ  N++ + V +                   
Sbjct: 56  YYRLQNPKHINIDPCVYEIRTMRGSGPGGQGTNSSSNKVELRADMELLSEFFDDELLAAL 115

Query: 257 -------------TGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
                        T +VV C + RS  +NK      L+  L++
Sbjct: 116 RRHEAGGALTSDGTTIVVSCHEHRSALQNKEGCLRKLQTLLHK 158


>gi|254966718|gb|ACT97351.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
           bacterium AM_gF3SD01_01]
 gi|254966740|gb|ACT97367.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
           bacterium AM_gF3SD01_07]
          Length = 140

 Score = 43.4 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 24/118 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +G   ++++ Q+ RSQ  N+  A + L A + EL   ++   A     +  E     +
Sbjct: 65  SGDGVIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASKERRLSSK 122


>gi|189183342|ref|YP_001937127.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180113|dbj|BAG39893.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 86

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            +N  D AV+ITHIPT ++ +C+  +S +KNK +A   L+  LYE EL+K   +     S
Sbjct: 17  DINPVDYAVKITHIPTSIITECRSYKSHYKNKIEAILSLKKTLYERELKKNSSMKTTLPS 76

Query: 302 SK 303
             
Sbjct: 77  RS 78


>gi|283835254|ref|ZP_06354995.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC
           29220]
 gi|291068965|gb|EFE07074.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC
           29220]
          Length = 140

 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 24/118 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAARHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +G   ++++ Q+ RSQ  N+  A + L A + EL   ++   A     +  E     +
Sbjct: 65  SGDGVIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASKERRLSSK 122


>gi|323450697|gb|EGB06577.1| hypothetical protein AURANDRAFT_65597 [Aureococcus anophagefferens]
          Length = 3079

 Score = 43.0 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 25/140 (17%)

Query: 1   MKLSRQLNCLGGLFD----WDNAVQRLSFLNTKTEDPHLWQNVIEA----KMLMRERQHL 52
           M+L+ +   +    +     D  V ++             +    A    + + R+ + +
Sbjct: 454 MQLADRTEAMNKAQEEKRTLDEKVSKIQE--------DFAEEQKTAFEITRDMTRQYKGM 505

Query: 53  DNAI--------SFIKEIQDRLCDNLILLELALEEDDCSI-LQETSDNLQRIKLEVEYKQ 103
              +          ++E+QD+L D    LE  + E D  I L++   +  + K+E   ++
Sbjct: 506 QEQLVDRITQLSHTVQELQDKLEDAEQHLEKTMREKDRIISLKDEEISAMKAKMEDMARE 565

Query: 104 FESLLSGEADSNDAYLEVHA 123
           F  +L    D     +E+ +
Sbjct: 566 FGGMLKETLDKMRERIELSS 585


>gi|77919634|ref|YP_357449.1| ABC transporter ATPase [Pelobacter carbinolicus DSM 2380]
 gi|77545717|gb|ABA89279.1| ABC-type transport system, ATPase component [Pelobacter
           carbinolicus DSM 2380]
          Length = 642

 Score = 43.0 bits (100), Expect = 0.065,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEIQD-RLCD 68
            +   + L+ L  +  DP L+++   ++ +  E Q L + +    +  +  +L +
Sbjct: 586 IETGEENLAQLEARLADPGLYEDPERSRQIAAEYQSLQDEVGVLYQRWESLQLEE 640


>gi|213513061|ref|NP_001134526.1| peptidyl-tRNA hydrolase ICT1, mitochondrial [Salmo salar]
 gi|296439630|sp|B5XAM2|ICT1_SALSA RecName: Full=Peptidyl-tRNA hydrolase ICT1, mitochondrial; AltName:
           Full=Immature colon carcinoma transcript 1 protein
           homolog; Flags: Precursor
 gi|209734046|gb|ACI67892.1| Immature colon carcinoma transcript 1 protein precursor [Salmo
           salar]
          Length = 191

 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 56/179 (31%), Gaps = 29/179 (16%)

Query: 178 YGWLKGEQGVHR----LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           Y  L    G+ R      ++ P    + +  SFS             + I      +   
Sbjct: 8   YFLLSRCSGIIRSVTLQGKLPPVCIRNSQCPSFSYGNRASDNPQDGHVNIPVDRLTVSYS 67

Query: 234 RASGAGGQHVNTTDSAVRI-THIPT------------------------GVVVQCQQERS 268
           R+SG GGQHVN   +   +  H+ T                         ++V  +Q RS
Sbjct: 68  RSSGPGGQHVNKVSTKAEVRFHVYTADWIPEDVRQKIILNNKNRINKAGELLVTSEQSRS 127

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           Q +N       +   + +   +  E  A       + +    + R    + +  VK  R
Sbjct: 128 QQRNMGDCIQKISDIIAKATEKPHEPSAEDIALRASRLEKRNKERLKQKKLHSAVKQTR 186


>gi|325091351|gb|EGC44661.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 698

 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLE 98
             + LM+  + L +    ++ +  +L     L+    +  ED      E    ++ ++ E
Sbjct: 292 RLEELMQANRELQDRGEDVETVARQLKQLEELVSELEDGLEDARRGEAEARGEVEFLRGE 351

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  + E  L  E + ++    V+ GAGG +    +  L +      E R  K     + 
Sbjct: 352 VERTRLE--LKQEREKSN---SVYKGAGG-DGHASSKDLDQKDD---EIRGLKAIIHSLS 402

Query: 159 DGEEAGIKSA 168
            GE  G+   
Sbjct: 403 RGEPTGLTHI 412


>gi|237729498|ref|ZP_04559979.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226909227|gb|EEH95145.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 140

 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 24/118 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +G   ++++ Q+ RSQ  N+  A + L A + EL   ++   A     +  E     +
Sbjct: 65  SGDGIIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASKERRLSSK 122


>gi|71663991|ref|XP_818981.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70884262|gb|EAN97130.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 486

 Score = 43.0 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%)

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            E D    +    G GGQ  N       + H P+G+VV+  +  S   N+  A  +L  +
Sbjct: 130 REEDLCEQSTLGRGPGGQATNRRMQTAIVKHEPSGIVVKFSKFPSYWLNRKAAREILNLR 189

Query: 284 LYEL 287
           L E 
Sbjct: 190 LEEH 193


>gi|224477038|ref|YP_002634644.1| putative ABC transporter ATP-binding protein [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222421645|emb|CAL28459.1| putative ABC transporter ATP-binding protein [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 642

 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAIS 57
           ++ RQ+       + +   Q+++ +N +   P ++ +  +A  L  E+      L+  + 
Sbjct: 575 QIERQIENCEA--EIEACEQKIADINEQLTQPEIFSDPEKAGELADEKNNTEQQLEQIMI 632

Query: 58  FIKEIQDRL 66
             +E+Q+++
Sbjct: 633 RWEELQEKI 641


>gi|312141323|ref|YP_004008659.1| clp peptidase ATP-binding subunit clpb [Rhodococcus equi 103S]
 gi|325673839|ref|ZP_08153529.1| chaperone protein ClpB [Rhodococcus equi ATCC 33707]
 gi|311890662|emb|CBH49981.1| putative Clp peptidase ATP-binding subunit ClpB [Rhodococcus equi
           103S]
 gi|325555104|gb|EGD24776.1| chaperone protein ClpB [Rhodococcus equi ATCC 33707]
          Length = 850

 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 17/140 (12%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  D     +  + + L    Q+  NAI  ++E++++L       E A  +
Sbjct: 439 KERLEKLREELAD-----DREKLRQLTARWQNEKNAIDSVREVKEQLEALRGEEERAERD 493

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQF--------ESLLS---GEADSNDAYLEVHAGAGG 127
            D   + E     +  ++ ++E              +L    G  D  D          G
Sbjct: 494 GDLGKVAELRYGRIPELEKQLEAAAAVSDGASDGAVMLKEEVGPDDVADVVAAWTGIPAG 553

Query: 128 TESQDWANMLLRMYTRWAEK 147
              +     LLRM T  A++
Sbjct: 554 RMMEGETAKLLRMETELAKR 573


>gi|225561906|gb|EEH10186.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 698

 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLE 98
             + LM+  + L +    ++ +  +L     L+    +  ED      E    ++ ++ E
Sbjct: 292 RLEELMQANRELQDRGEDVETVARQLKQLEELVSELEDGLEDARRGEAEARGEVEFLRGE 351

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  + E  L  E + ++    V+ GAGG +    +  L +      E R  K     + 
Sbjct: 352 VERTRLE--LKQEREKSN---SVYKGAGG-DGHASSKDLDQKDD---EIRGLKAIIHSLS 402

Query: 159 DGEEAGIKSA 168
            GE  G+   
Sbjct: 403 RGEPTGLTHI 412


>gi|139439680|ref|ZP_01773093.1| Hypothetical protein COLAER_02121 [Collinsella aerofaciens ATCC
           25986]
 gi|133775021|gb|EBA38841.1| Hypothetical protein COLAER_02121 [Collinsella aerofaciens ATCC
           25986]
          Length = 678

 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 10/82 (12%)

Query: 3   LSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI- 56
           L+++L  +           D    R   L        L+ +  +    + E   L   + 
Sbjct: 597 LNKKLKGVRNQLKKIETELDKKRARYDELMELMASEELYADQDKFNAALGEYNGLKQELP 656

Query: 57  ---SFIKEIQDRLCDNLILLEL 75
                  E+  ++ +     EL
Sbjct: 657 KLEDEWLELSTQIEE-ETAREL 677


>gi|170780828|ref|YP_001709160.1| hypothetical protein CMS_0381 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155396|emb|CAQ00502.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 140

 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 32/57 (56%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           I  ++ R    R+SG GGQHVNT+DS V++T    G +V   ++R++   +     +
Sbjct: 11  IPAAELRWRFSRSSGPGGQHVNTSDSRVQLTWYAAGSMVLSDEQRARILQRLDRRMV 67


>gi|188533060|ref|YP_001906857.1| peptidyl-tRNA hydrolase domain protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028102|emb|CAO95959.1| Conserved hypothetical protein YaeJ [Erwinia tasmaniensis Et1/99]
          Length = 138

 Score = 42.6 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THI--PT 257
           I I ++D  +   RA GAGGQHVN + +A+ +                      H+  P 
Sbjct: 8   IVIPDADIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPEFYQQRMLAVSHHLITPE 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+V ++ Q+ RSQ  N+  A   L   + EL   ++   A
Sbjct: 68  GMVIIKAQEYRSQEMNREAALKRLENLILELTTVEKTRRA 107


>gi|296417609|ref|XP_002838445.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634384|emb|CAZ82636.1| unnamed protein product [Tuber melanosporum]
          Length = 1482

 Score = 42.6 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 16/163 (9%)

Query: 16   WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER------QHLDNAISFIKEIQDRLCDN 69
             D   ++L  LN +  +  + +   E      E+      + L+N    ++E+ + + D+
Sbjct: 1098 VDGIREQLETLNEQLSNADMARTKAEKSRTKAEKAFNGSTKELENIAVELEELHEEIQDH 1157

Query: 70   LILLEL--ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              L E   A  E+  + L+E S+ L  +K E++ K       GE +   A  E+      
Sbjct: 1158 AKLAEADNAKAEEAQAYLEEKSEELAAVKEELDEKL------GELNKTRAA-EIEMKNKL 1210

Query: 128  TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             E Q       +    W E+   K E   + DG EA  +  +L
Sbjct: 1211 EEHQKALVDNQKRLRHW-EQELSKLELQSVSDGAEATEEDLSL 1252


>gi|303236051|ref|ZP_07322654.1| ATP-dependent chaperone protein ClpB [Prevotella disiens
           FB035-09AN]
 gi|302483924|gb|EFL46916.1| ATP-dependent chaperone protein ClpB [Prevotella disiens
           FB035-09AN]
          Length = 863

 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 3/132 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  L  + E      +  +  +L +E   L    +  K   +     +  ++ 
Sbjct: 410 LDEITRRLKQLEIEREAIKRENDTEKIALLDKEIAELKEQETSFKAKWEGEKALVNKIQQ 469

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG---TESQD 132
             EE +    +      +     V   ++  L + E D  +  L++ A  GG      + 
Sbjct: 470 DKEEIEHLKFEAEKAEREGNYERVAEIRYSRLKALEDDIKNIQLQLQATQGGEAMIREEV 529

Query: 133 WANMLLRMYTRW 144
            A+ +  + +RW
Sbjct: 530 TADDIAEVVSRW 541


>gi|255605645|ref|XP_002538425.1| conserved hypothetical protein [Ricinus communis]
 gi|223512202|gb|EEF23957.1| conserved hypothetical protein [Ricinus communis]
          Length = 75

 Score = 42.6 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307
           AV +TH PTGV V     RSQ  N+  A + L  KL    + K +E+A      + ++G 
Sbjct: 2   AVVLTHRPTGVSVTI-DSRSQADNRRVARDELLRKL--RAVSKADEVATAAADKRAQVGT 58

Query: 308 --WGRQIRSYVLQPY 320
              G ++RSY +Q  
Sbjct: 59  GQRGDKVRSYQVQNQ 73


>gi|212637318|ref|YP_002313843.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           piezotolerans WP3]
 gi|212558802|gb|ACJ31256.1| Class I peptide chain release factor [Shewanella piezotolerans WP3]
          Length = 140

 Score = 42.6 bits (99), Expect = 0.091,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           + I +S+      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 10  VSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKNSSLPEFYQARLLAKADHRITKS 69

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++++CQQ RSQ  N+  A     A +  +   +++ IA
Sbjct: 70  GKIIIKCQQSRSQDFNRQTALEQFIALVASVAAVQKKRIA 109


>gi|328852030|gb|EGG01179.1| hypothetical protein MELLADRAFT_92698 [Melampsora larici-populina
           98AG31]
          Length = 177

 Score = 42.6 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 20/109 (18%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSA------------------VRITHIPTGVVVQCQ 264
           ++ESD   +  R SG GGQ +N+   +                  V + H PTG+ VQC 
Sbjct: 38  LNESDLIEEFVRGSGPGGQCINSLSFSQNMLMDDSCILKKTNFISVSLIHKPTGIRVQCH 97

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
            +RS+  N+ +A  +L  K+ +L L   +           +     +IR
Sbjct: 98  AQRSRESNRKEARKILSEKV-DLFLNPGKSKLEFKWQKARDKKR-AKIR 144


>gi|292489203|ref|YP_003532090.1| hypothetical protein EAMY_2735 [Erwinia amylovora CFBP1430]
 gi|292898562|ref|YP_003537931.1| peptidyl-tRNA hydrolase [Erwinia amylovora ATCC 49946]
 gi|291198410|emb|CBJ45517.1| putative peptidyl-tRNA hydrolase [Erwinia amylovora ATCC 49946]
 gi|291554637|emb|CBA22320.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Erwinia
           amylovora CFBP1430]
 gi|312173363|emb|CBX81617.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Erwinia
           amylovora ATCC BAA-2158]
          Length = 138

 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THI--PT 257
           I I  ++  +   RA GAGGQHVN + +A+ +                      H+  P 
Sbjct: 8   IVIPAAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPDFYQQRMLAVSHHLITPE 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+V ++ Q+ RSQ  N+  A   L   + EL   ++   A
Sbjct: 68  GMVIIKAQEYRSQEMNRDAALKRLENLIIELTAVEKSRRA 107


>gi|326333804|ref|ZP_08200037.1| class I peptide chain release factor [Nocardioidaceae bacterium
           Broad-1]
 gi|325948386|gb|EGD40493.1| class I peptide chain release factor [Nocardioidaceae bacterium
           Broad-1]
          Length = 141

 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 19/84 (22%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG-------------------VVVQC 263
           I +S+      R+ G GGQ VNTTDS V ++  P+                    + V  
Sbjct: 18  IPDSELVERFSRSPGPGGQSVNTTDSRVELSWDPSASEALDESQRARILARSPGPITVVS 77

Query: 264 QQERSQHKNKAQAWNMLRAKLYEL 287
            ++RSQH+N+  A   L  ++ EL
Sbjct: 78  HEQRSQHRNRVAARERLALRIREL 101


>gi|322831612|ref|YP_004211639.1| Class I peptide chain release factor [Rahnella sp. Y9602]
 gi|321166813|gb|ADW72512.1| Class I peptide chain release factor [Rahnella sp. Y9602]
          Length = 136

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           +EI +S+  +   RA G GGQ+VN T +A+ +                      H  T  
Sbjct: 8   LEIPDSEIELTAIRAQGNGGQNVNKTSTAIHLRFDIKASSLPEYYKERLLAFNHHSVTAD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             V+++ Q+ RSQ  N+  A   L A + +  + ++           T+   G +IR 
Sbjct: 68  GWVIIKAQEYRSQEMNREAALARLGALISQAMVVEK-------PRRATKPTRGSKIRR 118


>gi|238763955|ref|ZP_04624911.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC
           33638]
 gi|238697772|gb|EEP90533.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC
           33638]
          Length = 138

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + + +S+  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SNNVSLPDSEVELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLM 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           T    ++++ Q+ RSQ  N+  A   L A + +  + ++           T+   G +IR
Sbjct: 65  TAEGVIIIKAQEYRSQDMNREAAQQRLVALIRQAMVIEK-------PRRATKPTRGSKIR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|238792731|ref|ZP_04636362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC
           29909]
 gi|238727839|gb|EEQ19362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC
           29909]
          Length = 138

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + + +S+  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SNHVSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPDYYKERLLLLNSHLM 64

Query: 257 TGV---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           T     +++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR
Sbjct: 65  TAEGIVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTK-------GSKIR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|157960364|ref|YP_001500398.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157845364|gb|ABV85863.1| Class I peptide chain release factor [Shewanella pealeana ATCC
           700345]
          Length = 140

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           + I +S+      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 10  VSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLAKADHRITKS 69

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++++CQQ RSQ  N+  A     A +  +   +++ IA
Sbjct: 70  GKIIIKCQQSRSQDFNRQTALEQFIALVASVNAVQKKRIA 109


>gi|218779987|ref|YP_002431305.1| ABC transporter [Desulfatibacillum alkenivorans AK-01]
 gi|218761371|gb|ACL03837.1| ABC transporter related [Desulfatibacillum alkenivorans AK-01]
          Length = 666

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 25/57 (43%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
               R + ++    DP ++ +  +++ L+ E Q + + +  +    +   + +  LE
Sbjct: 601 KLEAREAEISELLADPDVFSDSEKSQPLLEEYQKVKDGLDNLMTAWEADQEAIEELE 657


>gi|254393228|ref|ZP_05008382.1| hypothetical protein SSCG_05723 [Streptomyces clavuligerus ATCC
           27064]
 gi|197706869|gb|EDY52681.1| hypothetical protein SSCG_05723 [Streptomyces clavuligerus ATCC
           27064]
          Length = 1138

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 17/88 (19%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAK-----------MLMRERQHLDNAISFIKEIQDRLCD 68
           + R   L  +  D        EA+            L+R +  L       +E++ RL +
Sbjct: 476 LSRAEELEEQLADAD-----REAQRITARQAALEEALLRRQDRLKELRGECRELKLRLAE 530

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRI 95
             +L  E A  E + S LQE   +L+  
Sbjct: 531 VEVLRGEHAQLEQERSALQEEVVHLKEA 558


>gi|301019027|ref|ZP_07183243.1| conserved domain protein [Escherichia coli MS 196-1]
 gi|299882432|gb|EFI90643.1| conserved domain protein [Escherichia coli MS 196-1]
          Length = 63

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%)

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           + Q ERSQH NK  A  ++  KL + + +    + +       +I  G   R++    +
Sbjct: 2   KVQSERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAF 60


>gi|240275514|gb|EER39028.1| Noc1p protein [Ajellomyces capsulatus H143]
          Length = 655

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLE 98
             + LM+  + L +    ++ +  +L     L+    +  ED      E    ++ ++ E
Sbjct: 249 RLEELMQANRELQDRGEDVETVARQLKQLEELVSELEDGLEDARRGEAEARGEVEFLRGE 308

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
           VE  + E  L  E + ++    V+ GAGG +    +  L +      E R  K     + 
Sbjct: 309 VERTRLE--LKQEREKSN---SVYKGAGG-DGHASSKDLDQKDD---EIRGLKAIIHSLS 359

Query: 159 DGEEAGIKSA 168
            GE  G+   
Sbjct: 360 RGEPTGLTHI 369


>gi|257784522|ref|YP_003179739.1| ABC transporter-like protein [Atopobium parvulum DSM 20469]
 gi|257473029|gb|ACV51148.1| ABC transporter related [Atopobium parvulum DSM 20469]
          Length = 672

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 8/81 (9%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  ++L+ +        A +R   L     D  L+ +  +    M E Q L   I  ++ 
Sbjct: 600 ETKKRLDEVEAALTP--AHKRYDELMALMADEALYNDQQKFDECMTEYQALSKKIPALEA 657

Query: 62  IQDRLCDNLILLELALEEDDC 82
                 + L L E    + D 
Sbjct: 658 ------EWLELSEKMEADIDE 672


>gi|255730056|ref|XP_002549953.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240133022|gb|EER32579.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 617

 Score = 41.9 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           +  +  + +  ++E++ L+  I+ +K+ Q++        E  L E + S+ Q     L++
Sbjct: 238 IINDTEK-QEFLKEKERLEKEITKLKDKQEQFTREQEAKERKLSEQEQSLKQLEKSLLKK 296

Query: 95  IKLEVEYKQFESLLSGE 111
            + E++  +F+   S  
Sbjct: 297 -EKELQDSEFKLKQSPP 312


>gi|290953350|ref|ZP_06557971.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313397|ref|ZP_06804004.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 83

 Score = 41.9 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LL   L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELL--ELGEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGE 111
           + + Q +  E+E  +F  + SG+
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGK 82


>gi|330685714|gb|EGG97352.1| hypothetical protein SEVCU121_0789 [Staphylococcus epidermidis
          VCU121]
          Length = 34

 Score = 41.9 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 16/34 (47%)

Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
             +P+ W +   A+ ++ +   L + ++   E+
Sbjct: 1  MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYEL 34


>gi|326433344|gb|EGD78914.1| hypothetical protein PTSG_01889 [Salpingoeca sp. ATCC 50818]
          Length = 203

 Score = 41.9 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 25/101 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI-------------------------THIPT 257
           I +        R+ GAGGQHVN   + V +                          +   
Sbjct: 68  IPQEALTATYSRSGGAGGQHVNKVSTKVTLRFNVDEAYWLTEEAKAAIKTNLSTRMNKQG 127

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
            +VVQCQ  RSQ++N   A   +     E   Q +E  A  
Sbjct: 128 ELVVQCQDTRSQNRNYDLAVQRMTEMCVEATKQDKEASAQQ 168


>gi|332880579|ref|ZP_08448253.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332681567|gb|EGJ54490.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 866

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 15/103 (14%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA--------------ISFIKE 61
            D   +RL  L  + E      +  + + L +E   L                 ++ I++
Sbjct: 410 LDEIERRLKQLEIEREAIKRENDQPKLEQLSKEIAELKEQESSYKAKWEAERGLVNKIQQ 469

Query: 62  IQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQ 103
            + ++       E A  E D   + E     L+ ++ E+   Q
Sbjct: 470 NKQQIEQLKFEAERAEREGDYGKVAEIRYGKLKALEDEINRIQ 512


>gi|328771060|gb|EGF81100.1| hypothetical protein BATDEDRAFT_23806 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1815

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 23   LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
            +   N +  +  LW +  EA+   +E   ++         Q +L    ++ E+   + D 
Sbjct: 1118 IQETNQEMAEEALWLDAQEARK--QELAEMERKCE-----QAKLEREKLMQEMERLKTDI 1170

Query: 83   SILQE--TSDNLQRIKL 97
            ++ +E    D ++RI+ 
Sbjct: 1171 TLKRERAELDEIERIER 1187


>gi|148271389|ref|YP_001220950.1| hypothetical protein CMM_0210 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829319|emb|CAN00232.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 140

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 31/51 (60%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           I  ++ R    R+SG GGQHVNT+DS V++T  P   +V   Q+R++   +
Sbjct: 11  IPAAELRWRFSRSSGPGGQHVNTSDSRVQLTWSPVESLVLNDQQRARILER 61


>gi|110634105|ref|YP_674313.1| ABC transporter related [Mesorhizobium sp. BNC1]
 gi|110285089|gb|ABG63148.1| ABC transporter related protein [Chelativorans sp. BNC1]
          Length = 625

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKE 61
           L++++    GL   +   +R+  +  +  DP L+  +  +   L +ER  L  A++  +E
Sbjct: 553 LAKEIKATEGL--IERTRKRIEAIEAQMADPGLYARDPGKISTLGKERADLAQALARQEE 610

Query: 62  IQDRLCDNLILLELALEE 79
              +  +     E  + E
Sbjct: 611 ---KWLELSTEYEEGVAE 625


>gi|238784903|ref|ZP_04628903.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC
           43970]
 gi|238714220|gb|EEQ06232.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC
           43970]
          Length = 138

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTGV 259
           + + +S+  +   RA GAGGQHVN T +A+ +                      H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
              +++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR 
Sbjct: 68  GVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKPRRATKPTK-------GSKIRR 118


>gi|330997711|ref|ZP_08321556.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila
           YIT 11841]
 gi|329570239|gb|EGG51979.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila
           YIT 11841]
          Length = 866

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 15/103 (14%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA--------------ISFIKE 61
            D   +RL  L  + E      +  + + L +E   L                 ++ I++
Sbjct: 410 LDEIERRLKQLEIEREAIKRENDQPKLEQLSKEIAELKEQESSYKAKWEAERGLVNKIQQ 469

Query: 62  IQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQ 103
            + ++       E A  E D   + E     L+ ++ E+   Q
Sbjct: 470 NKQQIEQLKFEAERAEREGDYGKVAEIRYGKLKALEDEINRIQ 512


>gi|167622537|ref|YP_001672831.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167352559|gb|ABZ75172.1| Class I peptide chain release factor [Shewanella halifaxensis
           HAW-EB4]
          Length = 140

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           + I +S+      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 10  VSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEYYQQRLLAKADHRITKS 69

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++++CQQ RSQ  N+  A     A +  +   +++ IA
Sbjct: 70  GKIIIKCQQSRSQDFNRQTALEQFIALVASVSAVQKKRIA 109


>gi|317127421|ref|YP_004093703.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
 gi|315472369|gb|ADU28972.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
          Length = 1287

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 13/119 (10%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +L  ++  L G  +  +   RLS +    E             L      L+  +S ++ 
Sbjct: 1147 ELQARIADLEGSSEIADLENRLSEIEGLLE------------ELKSNFNELEEYVSHLEA 1194

Query: 62   IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            +   L D +  L+  LE+  +     E  D+ +      E K        +   + A L
Sbjct: 1195 LIKDLKDEIAALKAQLEDLPEAPGAPEEEDDDKDGPASKEEKDANDSPKNDESKDGAEL 1253



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 23/112 (20%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D D   QR++ L                  L      L+ + S I ++++RL +   LLE
Sbjct: 1130 DTDELQQRINELMELIA------------ELQARIADLEGS-SEIADLENRLSEIEGLLE 1176

Query: 75   LAL----EEDD-----CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSND 116
                   E ++      +++++  D +  +K ++E   +       E D  D
Sbjct: 1177 ELKSNFNELEEYVSHLEALIKDLKDEIAALKAQLEDLPEAPGAPEEEDDDKD 1228


>gi|299470020|emb|CBN79197.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 250

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 30/140 (21%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRI-------------------------THIP 256
           E+ E   ++   RASGAGGQ+VN   + V +                          +  
Sbjct: 116 EVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNK 175

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             +VV  Q+ R+Q +N++QA     AKL E+ + +  E A   +        G+ IR   
Sbjct: 176 GELVVTAQEFRTQKQNRSQAL----AKLREM-INEAWEPAKERKMRTGISKKGKAIRKQD 230

Query: 317 LQPYQMVKDLRTNIEKTSPS 336
                 VK  R+ +      
Sbjct: 231 KLHRSKVKAGRSKLSSRDYD 250


>gi|311748330|ref|ZP_07722115.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
 gi|126576838|gb|EAZ81086.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
          Length = 559

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 39/99 (39%), Gaps = 1/99 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N ++    +N K  DP L ++      L+  +  +   +      +  +  +  +  L L
Sbjct: 101 NLLKEFEEINEKFMDPALMEDPDAMNKLIERQGEVQEKLDAANAWELDVMLDKAMDALRL 160

Query: 78  EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSN 115
              D ++   +    +R+ L  +  ++ + LL  E  ++
Sbjct: 161 PPSDANVENLSGGEKRRVALCRLLLQEPDVLLLDEPTNH 199


>gi|238796634|ref|ZP_04640141.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC
           43969]
 gi|238719612|gb|EEQ11421.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC
           43969]
          Length = 138

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTGV 259
           + + +S+  +   RA GAGGQHVN T +A+ +                      H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
              +++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR 
Sbjct: 68  GVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKTRRATKPTK-------GSKIRR 118


>gi|332982851|ref|YP_004464292.1| ABC transporter-like protein [Mahella australiensis 50-1 BON]
 gi|332700529|gb|AEE97470.1| ABC transporter related protein [Mahella australiensis 50-1 BON]
          Length = 617

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
              R++ L     DP ++ +  + + L  E   L   +  + E
Sbjct: 572 IEDRIAELEAAMCDPDVYTDGQKMRQLTDEHAKLKTELEELYE 614


>gi|308160454|gb|EFO62944.1| Coiled-coil protein [Giardia lamblia P15]
          Length = 2095

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPH--LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D   QR+  L  +  +    + +   E    + +   L  A   +      L + + +L
Sbjct: 307 IDELNQRIEELLRRIAEQDDTIVEQQKEIADFLDQLASLKKAYDGLDNDHLALQNTIDVL 366

Query: 74  ELALEE---DDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
            +   E   ++  + ++ +D L+R         +  + +  GE D N + +++++  
Sbjct: 367 NMGKAESIAENEKLKRQIADLLKRVAAAEAERDRYKQQVAKGEPDRNLSLVDINSNT 423


>gi|229917818|ref|YP_002886464.1| ABC transporter [Exiguobacterium sp. AT1b]
 gi|229469247|gb|ACQ71019.1| ABC transporter related [Exiguobacterium sp. AT1b]
          Length = 633

 Score = 41.5 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IK 60
           ++ +++  +      +    RL  +     +P ++ +   A+ L  E      +I+    
Sbjct: 569 RIKQRIEEIEQA--IEQHENRLDEIEQLLCEPDVFNDFARAQELSTESDAAKESITALYA 626

Query: 61  EIQD 64
           E ++
Sbjct: 627 EWEE 630


>gi|83950821|ref|ZP_00959554.1| hypothetical protein ISM_06965 [Roseovarius nubinhibens ISM]
 gi|83838720|gb|EAP78016.1| hypothetical protein ISM_06965 [Roseovarius nubinhibens ISM]
          Length = 140

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 25/103 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAV-------------------------RI 252
           + +I I + +      R+SG GGQ+VN   +AV                         R 
Sbjct: 5   TDDISIEDWELTEQFVRSSGPGGQNVNKVSTAVELRFEAERSPNLPDPVKRRLKRLAGRR 64

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
                 +V+QC++ RSQ +N+  A   L   + +  ++ +  I
Sbjct: 65  WTDAGTLVIQCEETRSQARNREIARQRLAELIAKAAVKPKRRI 107


>gi|332202418|gb|EGJ16487.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
           protein [Streptococcus pneumoniae GA41317]
          Length = 446

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 40/263 (15%)

Query: 10  LGGLFDWDN-AVQRL-SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +GG+   D    ++L   LN +          +  + + R  +H++     I+  +    
Sbjct: 206 MGGIKKLDTYLKEKLQEELNQEQT--------LRYRDMERYSRHIEELYKEIRSFRHDYT 257

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + L  L L +EE+D   ++E  D++ R          + L   + D     + +   A  
Sbjct: 258 NLLTSLRLGIEEEDMEQIKEIYDSVLRDSS-------QKLQDNKYD-LGRLVNIRDRA-- 307

Query: 128 TESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
                  ++L   + +  EK   F  E  E    E   +     ++        +  +  
Sbjct: 308 -----LKSLLAGKFIKAREKNIVFNVEVPEEIQVEGMSLLDFLTIVS-------ILCDNA 355

Query: 187 VHRLVRIS-PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           +      S P+ S +         ++         I+IS     I  + AS  G +    
Sbjct: 356 IEASAEASQPHVSIAFLKNGAQETFIIENSIKEEGIDIS----EIFFFGASSKGEERGVG 411

Query: 246 TDSAVRIT--HIPTGVVVQCQQE 266
             + ++I   H  T +   CQ +
Sbjct: 412 LYTVMKIVESHPNTNLNTTCQNQ 434


>gi|194336150|ref|YP_002017944.1| Class I peptide chain release factor [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308627|gb|ACF43327.1| Class I peptide chain release factor [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 137

 Score = 41.5 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           I I + +  + T RA GAGGQ+VN  ++AV +                      H  T  
Sbjct: 8   IAIPDEEIELQTMRAQGAGGQNVNKVETAVHLRFDVKASSLPEDFREKLLLLKDHRMTKD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
             ++++ Q+ RSQ KN+  A   L+A L  + L  ++  
Sbjct: 68  GVIIIKAQRYRSQEKNRTDALMRLQALLQHVALPVKKRK 106


>gi|298208124|ref|YP_003716303.1| hypothetical protein CA2559_07781 [Croceibacter atlanticus
           HTCC2559]
 gi|83848045|gb|EAP85915.1| conserved hypothetical transmembrane protein [Croceibacter
           atlanticus HTCC2559]
          Length = 624

 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 11/94 (11%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL- 72
            D +   +R+  L              E + L +E +HL  +   +K+ + ++ D+    
Sbjct: 437 LDPEMTEERIKALEKL---------HEERQKLSKEEKHLKKSEKRLKKFEAKVEDHEKKR 487

Query: 73  LELALEEDDCSILQETSDNLQRIKL-EVEYKQFE 105
            EL  E+ +          ++R +  E   K+ E
Sbjct: 488 AELLKEKSEKQREAYEKAMVKRAEAIEKRSKKLE 521


>gi|146310394|ref|YP_001175468.1| peptidyl-tRNA hydrolase domain protein [Enterobacter sp. 638]
 gi|145317270|gb|ABP59417.1| Class I peptide chain release factor [Enterobacter sp. 638]
          Length = 140

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I +S+  I   RA GAGGQHVN   +A+ +                      H+ T  
Sbjct: 8   VSIPDSEFEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPESYKDALLAASHHLITSD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL + ++   A     +  E     +
Sbjct: 68  GVIIIKAQEYRSQELNREAALARLVALIKELTVVQKSRRATRPTRASKERRLSSK 122


>gi|302761410|ref|XP_002964127.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii]
 gi|300167856|gb|EFJ34460.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii]
          Length = 388

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           KDLRTN E +  S ++ G+L+  + A L  K+
Sbjct: 66  KDLRTNAETSDISVIMGGNLEPLLTAYLMSKQ 97


>gi|283477406|emb|CAY73322.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Erwinia
           pyrifoliae DSM 12163]
          Length = 138

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THI--PT 257
           I + +++  +   RA GAGGQHVN + +A+ +                      H+  P 
Sbjct: 8   IVVPDAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPDFYQQRMLAVSHHLITPE 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+V ++ Q+ RSQ  N+  A   L   + EL   ++   A
Sbjct: 68  GMVIIKAQEYRSQEMNRDAALKRLENLIIELTTVEKSRRA 107


>gi|124026030|ref|YP_001015146.1| hypothetical protein NATL1_13231 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961098|gb|ABM75881.1| Hypothetical protein NATL1_13231 [Prochlorococcus marinus str.
           NATL1A]
          Length = 140

 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 24/115 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------- 258
           + ++EI +++ +    R+SGAGGQ+VN TDS   I    +                    
Sbjct: 6   NTKLEIPDNEIKWRFSRSSGAGGQNVNKTDSRAEIVFNVSESKTLTPYQKYRISIQDEVK 65

Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
                + +  Q +R+Q++N+  A   L + L EL     ++      +  ++   
Sbjct: 66  LSNGCICIAVQDKRTQYQNRQLALTRLTSTLRELLKPPPKKRRETIPTRSSQRKR 120


>gi|261338810|ref|ZP_05966668.1| hypothetical protein ENTCAN_05005 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318633|gb|EFC57571.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 140

 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 24/103 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN   +A+ +                      H+ 
Sbjct: 5   SRNVSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           T    ++++ Q+ RSQ  N+  A + L A + EL  +++   A
Sbjct: 65  TSDGVIIIKAQEYRSQELNREAALSRLVAVIKELTAEQKSRRA 107


>gi|55981833|ref|YP_145130.1| S-layer protein-like protein [Thermus thermophilus HB8]
 gi|55773246|dbj|BAD71687.1| S-layer protein-related protein [Thermus thermophilus HB8]
          Length = 439

 Score = 41.1 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L             +RL  L  + +      +  E + L R ++ L   +  +++
Sbjct: 168 RLEENLKGTEASLK--TLEERLKALEARPQA-----DPKEVEALRRAQEELKGRLEALEK 220

Query: 62  IQDRLCDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQ 103
            +    + L  LE AL++  +   + QE  D LQ ++  ++  +
Sbjct: 221 ARSAQEEALRRLEEALKDLPEATRLAQEAQDRLQALEPRLQRAE 264



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +    R+  L  K   P    +    + L +E+  L   +  ++E    L      LE  
Sbjct: 113 EALETRVRELEAK---PG--ADPEALEALRKEKDDLARRVQALEEALKVLEAAQKALEAK 167

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ 103
             E++   L+ T  +L+ ++  ++  +
Sbjct: 168 RLEEN---LKGTEASLKTLEERLKALE 191


>gi|304440560|ref|ZP_07400447.1| peptidase M16C family protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371038|gb|EFM24657.1| peptidase M16C family protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 960

 Score = 41.1 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 13/144 (9%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSF--LNTK-----TEDPHLWQNVIEAKMLMRERQHLD 53
           +  S+ +N +    D D   + +    LN +        P   +N  EAK L  +     
Sbjct: 414 LDFSKTINFIRDKIDTDYFERYIEEKFLNNENSVVMVATPSATKNEKEAKELKDKLSAYK 473

Query: 54  NAISFIKEIQDRLCDNLILLE-LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            ++S  +EI+  + D     E L+ E+ D       +  L  IK E+E+ +F      E 
Sbjct: 474 ASLSD-EEIEKLIEDTKAFNEFLSKEDSDEDKATLPTLELTDIKPEIEHTEFTV----EE 528

Query: 113 DSNDAYLEVHAGAGGTESQDWANM 136
             N   L++     G    ++   
Sbjct: 529 YKNSEILKIDQPTNGITFLNFMFD 552


>gi|16128184|ref|NP_414733.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
 gi|89107072|ref|AP_000852.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|170079828|ref|YP_001729148.1| hypothetical protein ECDH10B_0172 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238899590|ref|YP_002925386.1| hypothetical protein BWG_0184 [Escherichia coli BW2952]
 gi|256025504|ref|ZP_05439369.1| peptidyl-tRNA hydrolase domain protein [Escherichia sp. 4_1_40B]
 gi|300949774|ref|ZP_07163749.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1]
 gi|300956077|ref|ZP_07168401.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1]
 gi|301028687|ref|ZP_07191907.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1]
 gi|301646517|ref|ZP_07246391.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1]
 gi|307136792|ref|ZP_07496148.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli H736]
 gi|331640646|ref|ZP_08341794.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
 gi|1175507|sp|P40711|YAEJ_ECOLI RecName: Full=Uncharacterized protein yaeJ
 gi|845336|gb|AAA82971.1| orf 140; significant similarity to ORF next to beta-keto adipate
           succinyl CoA transferase from P. putida [Escherichia
           coli]
 gi|1552767|gb|AAB08619.1| hypothetical [Escherichia coli]
 gi|1785845|dbj|BAA08432.1| YaeJ [Escherichia coli W3110]
 gi|1786389|gb|AAC73302.1| conserved protein [Escherichia coli str. K-12 substr. MG1655]
 gi|85674377|dbj|BAA77867.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|169887663|gb|ACB01370.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|238860430|gb|ACR62428.1| conserved protein [Escherichia coli BW2952]
 gi|260450605|gb|ACX41027.1| Class I peptide chain release factor [Escherichia coli DH1]
 gi|299878286|gb|EFI86497.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1]
 gi|300317071|gb|EFJ66855.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1]
 gi|300450839|gb|EFK14459.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1]
 gi|301075270|gb|EFK90076.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1]
 gi|315134882|dbj|BAJ42041.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli DH1]
 gi|315616323|gb|EFU96941.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3431]
 gi|323939932|gb|EGB36130.1| RF-1 domain-containing protein [Escherichia coli E482]
 gi|331040392|gb|EGI12599.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
 gi|332341525|gb|AEE54859.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 140

 Score = 41.1 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + EL  +K+  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEKKAR 105


>gi|56751268|ref|YP_171969.1| DNA gyrase subunit A [Synechococcus elongatus PCC 6301]
 gi|81299065|ref|YP_399273.1| DNA gyrase subunit A [Synechococcus elongatus PCC 7942]
 gi|56686227|dbj|BAD79449.1| DNA gyrase A subunit [Synechococcus elongatus PCC 6301]
 gi|81167946|gb|ABB56286.1| DNA gyrase subunit A [Synechococcus elongatus PCC 7942]
          Length = 856

 Score = 41.1 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-------EDDCSILQETSDNLQ 93
           EA+ + +E Q L   I   ++I  R    L ++E  LE       E   + L E    L+
Sbjct: 439 EAEKIEQEHQDLQRRIEDYRDILARRERVLEIIETELEQLQQRFQEPRRTTLLEADGELE 498

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            I L    K    L            E  A + GT
Sbjct: 499 TIDLIANEKSILLLTQQGYIKRMPVNEFTAQSRGT 533


>gi|290892220|ref|ZP_06555216.1| ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|290558343|gb|EFD91861.1| ABC transporter [Listeria monocytogenes FSL J2-071]
          Length = 650

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 ETLSEELESM 650


>gi|150007908|ref|YP_001302651.1| putative ABC transporter ATP-binding protein [Parabacteroides
           distasonis ATCC 8503]
 gi|255013404|ref|ZP_05285530.1| putative ABC transporter ATP-binding protein [Bacteroides sp.
           2_1_7]
 gi|256840153|ref|ZP_05545662.1| ABC transporter ATP-binding protein [Parabacteroides sp. D13]
 gi|262381528|ref|ZP_06074666.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_33B]
 gi|298376745|ref|ZP_06986700.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_19]
 gi|301310049|ref|ZP_07215988.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3]
 gi|149936332|gb|ABR43029.1| ABC transporter ATP-binding protein [Parabacteroides distasonis
           ATCC 8503]
 gi|256739083|gb|EEU52408.1| ABC transporter ATP-binding protein [Parabacteroides sp. D13]
 gi|262296705|gb|EEY84635.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_33B]
 gi|298266623|gb|EFI08281.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_19]
 gi|300831623|gb|EFK62254.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3]
          Length = 562

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 16/128 (12%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE--IQDRLCDNLILLELAL 77
           ++    +N +  DP + ++  +   L+  +  L + I       +  RL   +  L    
Sbjct: 104 LKEYEEVNERFGDPEVLEDPDKMDALINRQAELQDKIDATDAWNLDSRLERAMDALRCPP 163

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E+     L         +   +  +    LL    +  DA           ES DW   L
Sbjct: 164 EDQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLDA-----------ESIDW---L 209

Query: 138 LRMYTRWA 145
            +   ++A
Sbjct: 210 EQHLQQYA 217


>gi|60679074|gb|AAX33818.1| putative peptide chain release factor 2 [Campylobacter jejuni
           subsp. jejuni]
          Length = 40

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 2   PYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 38


>gi|309390181|gb|ADO78061.1| uncharacterized protein with myosin-like domain [Halanaerobium
           praevalens DSM 2228]
          Length = 427

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 12  GLFDWDNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            LF+ ++ + RL  LN + E  D +L     E +   ++   L   I   ++        
Sbjct: 76  ALFNINDVLNRLENLNQQLEKRDQNLAAKNEELEARDQKLAELQAQIEAREDKIAAKEAE 135

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGG 127
           +   E  ++  D  +L      L  +    +  +   E+L S   D  +   E+ A    
Sbjct: 136 IETKEAEIKAKDQELLA-VEKELAELTKNRDQLEQRIENLSSQRQDLEEQVSELQAQISD 194

Query: 128 TES 130
            E+
Sbjct: 195 LEA 197


>gi|217963778|ref|YP_002349456.1| ABC transporter ATP-binding protein [Listeria monocytogenes HCC23]
 gi|217333048|gb|ACK38842.1| ABC transporter, ATP-binding protein [Listeria monocytogenes HCC23]
 gi|307571649|emb|CAR84828.1| ABC transporter, ATP-binding protein [Listeria monocytogenes L99]
          Length = 650

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 ETLSEELESM 650


>gi|297736949|emb|CBI26150.3| unnamed protein product [Vitis vinifera]
          Length = 1648

 Score = 41.1 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVI---EAKMLMRERQHL------DNAISFIKEIQDRLCD 68
             V R+  L  + ++   W N      A+ L +++  L         +  +K+ +  L D
Sbjct: 392 KLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLED 451

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           N    +L+  E+    L + S  ++R    V   + E+
Sbjct: 452 N-TAKKLSEMEN---ALGKASGQVERANAAVRRLEVEN 485


>gi|325119395|emb|CBZ54948.1| Smc ABC ATpase, related [Neospora caninum Liverpool]
          Length = 1982

 Score = 41.1 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            ++  + + L      +   +R+  L+ + E         +A+ L R  +  +  I+ +++
Sbjct: 1689 EVESRFSALR--LTVEEKKKRVKRLDAEAE-----SLQAQAQELYRRVEEKEEEIAALEQ 1741

Query: 62   IQDRLCDNLILLELALEEDDCSI------LQETSDNLQRIKLEVEYKQFES 106
             Q +L      L+ A EE +  +       +E  +  +  + E    Q   
Sbjct: 1742 RQKQLEKKRRNLQAAREEGEKRLAAQTQAREEKENQAKAARKEAADLQVRL 1792


>gi|13162302|ref|NP_077044.1| dynactin subunit 1 [Rattus norvegicus]
 gi|2506256|sp|P28023|DCTN1_RAT RecName: Full=Dynactin subunit 1; AltName: Full=150 kDa
           dynein-associated polypeptide; AltName: Full=DAP-150;
           Short=DP-150; AltName: Full=p150-glued
 gi|1743380|emb|CAA44091.1| 150K dynein-associated polypeptide [Rattus norvegicus]
          Length = 1280

 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 12/108 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT---KTEDPHLW-----QNVIEAKMLMRERQHLDN 54
           L  +L  L           +L  L     + E    W     +   + +  ++E +    
Sbjct: 227 LEEKLETLR--LKRSEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEAKEAKE 284

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           A+   +   + + D    +E+A    D  + +E +++LQ+    ++ +
Sbjct: 285 ALEAKERYMEEMADTADAIEMATL--DKEMAEERAESLQQEVEALKER 330


>gi|303232237|ref|ZP_07318936.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4]
 gi|302481647|gb|EFL44708.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4]
          Length = 699

 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            ++L  +           R + L  K  D  L+ +      +M E   L   +S ++E  
Sbjct: 631 KKRLREIDAAL--AAGSARKAELEEKLADSDLYNDKAAFGDVMSEYNALVEKVSALEEEW 688

Query: 64  DRLCDNLI 71
             L D + 
Sbjct: 689 LELSDVVD 696


>gi|327393366|dbj|BAK10788.1| ABC transporter ATP-binding protein Uup [Pantoea ananatis AJ13355]
          Length = 639

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISF-- 58
            L+R+L  L      +    R+  L  K   P  +     + + ++ E   ++  +    
Sbjct: 569 NLTRELEQLPQ--KLEQLEARIGELQAKMSHPDFFSQPHDKTQPVLDELADVEQQLETAF 626

Query: 59  --IKEIQD 64
              +E++ 
Sbjct: 627 ARWEELES 634


>gi|259907565|ref|YP_002647921.1| peptidyl-tRNA hydrolase domain protein [Erwinia pyrifoliae Ep1/96]
 gi|224963187|emb|CAX54671.1| conserved uncharacterized protein YaeJ [Erwinia pyrifoliae Ep1/96]
 gi|310764927|gb|ADP09877.1| peptidyl-tRNA hydrolase domain protein [Erwinia sp. Ejp617]
          Length = 136

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THI--PT 257
           I + +++  +   RA GAGGQHVN + +A+ +                      H+  P 
Sbjct: 6   IVVPDAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPDFYQQRMLAVSHHLITPE 65

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+V ++ Q+ RSQ  N+  A   L   + EL   ++   A
Sbjct: 66  GMVIIKAQEYRSQEMNRDAALKRLENLIIELTTVEKSRRA 105


>gi|157377219|ref|YP_001475819.1| hypothetical protein Ssed_4087 [Shewanella sediminis HAW-EB3]
 gi|157319593|gb|ABV38691.1| class I peptide chain release factor [Shewanella sediminis HAW-EB3]
          Length = 142

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------H--IPT 257
           + + E++      R+SGAGGQH+N   +A +I                      H    +
Sbjct: 12  VSLQENEIEWQFIRSSGAGGQHINKVSTAAQIIFDIKASSLPDFYKQALLKKADHRITKS 71

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G V ++CQQ RSQ  N+  A       +  + + ++  IA
Sbjct: 72  GKVIIKCQQSRSQDFNRQTALAQFIELIASVAITQKRRIA 111


>gi|297690391|ref|XP_002822603.1| PREDICTED: pleckstrin homology-like domain family B member 1-like
           isoform 4 [Pongo abelii]
          Length = 1319

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRM---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|288958910|ref|YP_003449251.1| ABC transporter ATP-binding protein [Azospirillum sp. B510]
 gi|288911218|dbj|BAI72707.1| ABC transporter ATP-binding protein [Azospirillum sp. B510]
          Length = 609

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNAISFIKEI 62
            R+L+ L    D       ++ L     DP    ++  + +    +      A++  +E 
Sbjct: 536 QRELDELPARMD--TLSAEIAKLEKLLADPDLFTRDAAKFQKTSEQLHARQAALATAEE- 592

Query: 63  QDRLCDNLILLELAL 77
             R  +   + E   
Sbjct: 593 --RWLELEAMREELE 605


>gi|225432464|ref|XP_002277269.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 893

 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVI---EAKMLMRERQHL------DNAISFIKEIQDRLCD 68
             V R+  L  + ++   W N      A+ L +++  L         +  +K+ +  L D
Sbjct: 546 KLVPRVRELQNQLQEWTEWANQKVMQAARRLGKDKAELKTLRQEKEEVERLKKEKQTLED 605

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           N    +L+  E+    L + S  ++R    V   + E+
Sbjct: 606 N-TAKKLSEMEN---ALGKASGQVERANAAVRRLEVEN 639


>gi|291616938|ref|YP_003519680.1| Uup [Pantoea ananatis LMG 20103]
 gi|291151968|gb|ADD76552.1| Uup [Pantoea ananatis LMG 20103]
          Length = 639

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISF-- 58
            L+R+L  L      +    R+  L  K   P  +     + + ++ E   ++  +    
Sbjct: 569 NLTRELEQLPQ--KLEQLEARIGELQAKMSHPDFFSQPHDKTQPVLDELADVEQQLETAF 626

Query: 59  --IKEIQD 64
              +E++ 
Sbjct: 627 ARWEELES 634


>gi|114640667|ref|XP_001161945.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 1 [Pan troglodytes]
          Length = 1212

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|293349193|ref|XP_002727099.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 3 [Rattus norvegicus]
 gi|293361089|ref|XP_002729963.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 2 [Rattus norvegicus]
          Length = 1323

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 722 EERAQVLGRV---EQLKVRVKELEQQL--------QEAAREAEMERALLQGEREAERALL 770

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + +D L+      E  +F+ L
Sbjct: 771 QKEQRAMDQLQEKLVALETGIQKERDKEADALETETKLFEDLEFQQL 817


>gi|238759925|ref|ZP_04621079.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236]
 gi|238701832|gb|EEP94395.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236]
          Length = 138

 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           + + +S+  +   RA GAGGQHVN T +A+ +                      H+ T  
Sbjct: 8   VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             V+++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR 
Sbjct: 68  GVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTK-------GSKIRR 118


>gi|297690387|ref|XP_002822601.1| PREDICTED: pleckstrin homology-like domain family B member 1-like
           isoform 2 [Pongo abelii]
 gi|297690389|ref|XP_002822602.1| PREDICTED: pleckstrin homology-like domain family B member 1-like
           isoform 3 [Pongo abelii]
          Length = 1377

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRM---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|46581455|ref|YP_012263.1| ABC transporter ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450877|gb|AAS97523.1| ABC transporter, ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235108|gb|ADP87962.1| ABC transporter related protein [Desulfovibrio vulgaris RCH1]
          Length = 659

 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D +  +     +  +  DP ++ +   A  L++    L  A   + E    L   +  LE
Sbjct: 589 DLEKLLDEQGTVEAELADPDVYADGARASALLQRFGELQAASEKLLERMGELEPVIAELE 648


>gi|126332018|ref|XP_001365741.1| PREDICTED: similar to dynactin 1 p150 [Monodelphis domestica]
          Length = 1285

 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 13/111 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT---KTEDPHLW-----QNVIEAKMLMRE-RQHLD 53
           L  +L  L           +L  L     + E    W     +   + +  ++E R+   
Sbjct: 231 LEEKLETLR--LKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRKLKEARKEAK 288

Query: 54  NAISFIKEIQDRLCDNLILLELA-LEEDDCSILQE-TSDNLQRIKLEVEYK 102
           +A+   +   + + D    +E+A L+++      E     ++ +K  +E  
Sbjct: 289 DALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERLEEL 339


>gi|120601374|ref|YP_965774.1| ABC transporter [Desulfovibrio vulgaris DP4]
 gi|120561603|gb|ABM27347.1| ABC transporter related protein [Desulfovibrio vulgaris DP4]
          Length = 659

 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D +  +     +  +  DP ++ +   A  L++    L  A   + E    L   +  LE
Sbjct: 589 DLEKLLDEQGTVEAELADPDVYADGARASALLQRFGELQAASEKLLERMGELEPVIAELE 648


>gi|293349191|ref|XP_001067414.2| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 1 [Rattus norvegicus]
 gi|293361087|ref|XP_576401.3| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 3 [Rattus norvegicus]
          Length = 1370

 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 722 EERAQVLGRV---EQLKVRVKELEQQL--------QEAAREAEMERALLQGEREAERALL 770

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + +D L+      E  +F+ L
Sbjct: 771 QKEQRAMDQLQEKLVALETGIQKERDKEADALETETKLFEDLEFQQL 817


>gi|300797394|ref|NP_001178507.1| pleckstrin homology-like domain family B member 1 [Rattus
           norvegicus]
 gi|293349189|ref|XP_002727098.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 2 [Rattus norvegicus]
          Length = 1381

 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 722 EERAQVLGRV---EQLKVRVKELEQQL--------QEAAREAEMERALLQGEREAERALL 770

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + +D L+      E  +F+ L
Sbjct: 771 QKEQRAMDQLQEKLVALETGIQKERDKEADALETETKLFEDLEFQQL 817


>gi|333010687|gb|EGK30120.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri VA-6]
          Length = 140

 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRAPSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTKEQKAR 105


>gi|261334819|emb|CBH17813.1| dynein heavy chain, putative [Trypanosoma brucei gambiense DAL972]
          Length = 4152

 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 37   QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            ++ I A+ + +ER  L+     +   +D    N  L EL  +E+   +L+E   ++   +
Sbjct: 3240 EDQILARTVEKERNDLEQEKQRLT--RDCAEKNRELKEL--QENILRMLEEAEGDILDQE 3295

Query: 97   LEVEYKQFESLLSGE 111
              ++  +   L S E
Sbjct: 3296 ELIDALEKSKLKSTE 3310


>gi|254486382|ref|ZP_05099587.1| peptidyl-tRNA hydrolase domain protein [Roseobacter sp. GAI101]
 gi|214043251|gb|EEB83889.1| peptidyl-tRNA hydrolase domain protein [Roseobacter sp. GAI101]
          Length = 140

 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 25/90 (27%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------------------------THI 255
           +I I + +      RASG GGQ+VN   SAV +                           
Sbjct: 7   DIAIQDWELTETFMRASGPGGQNVNKVSSAVELRFEAATSPSLSAPVKTRLRRLAGRRWT 66

Query: 256 PTG-VVVQCQQERSQHKNKAQAWNMLRAKL 284
             G +V+QC + RSQ +N+  A + L+A +
Sbjct: 67  TEGALVIQCDETRSQARNREIARDRLKALI 96


>gi|71755951|ref|XP_828890.1| dynein heavy chain [Trypanosoma brucei TREU927]
 gi|70834276|gb|EAN79778.1| dynein heavy chain, putative [Trypanosoma brucei]
          Length = 4152

 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 37   QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            ++ I A+ + +ER  L+     +   +D    N  L EL  +E+   +L+E   ++   +
Sbjct: 3240 EDQILARTVEKERNDLEQEKQRLT--RDCAEKNRELKEL--QENILRMLEEAEGDILDQE 3295

Query: 97   LEVEYKQFESLLSGE 111
              ++  +   L S E
Sbjct: 3296 ELIDALEKSKLKSTE 3310


>gi|332208407|ref|XP_003253295.1| PREDICTED: pleckstrin homology-like domain family B member 1
           isoform 1 [Nomascus leucogenys]
          Length = 1318

 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 19/109 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR-----ERQHLDNAISF 58
             +   LG +   +    R+  L  + ++      +  A  L++     ER  L      
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQLQESSREAEMERA--LLQGEREAERALLQKEQKA 772

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           + ++Q++L    + LE  ++E D       ++ L+      E  +F+ L
Sbjct: 773 VDQLQEKL----VALETGIQERDKE-----AEALETETKLFEDLEFQQL 812


>gi|39996025|ref|NP_951976.1| ABC transporter ATP-binding protein [Geobacter sulfurreducens PCA]
 gi|39982790|gb|AAR34249.1| ABC transporter, ATP-binding protein [Geobacter sulfurreducens PCA]
          Length = 645

 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQD 64
           L+ L  +  DP  + +  +A+    E   L   I+   +E + 
Sbjct: 599 LADLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWES 641


>gi|313676944|ref|YP_004054940.1| ABC transporter related protein [Marivirga tractuosa DSM 4126]
 gi|312943642|gb|ADR22832.1| ABC transporter related protein [Marivirga tractuosa DSM 4126]
          Length = 561

 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCDNLILL 73
           N ++    +N K  DP +  N  +   L+ ++  +   +      E+  RL   +  L
Sbjct: 101 NLLKEFEEINEKFADPEVLDNPDKMNDLIEQQAKVQEKLDHANAWELDSRLEQAMDAL 158


>gi|146329967|ref|YP_001210275.1| BcepGomrgp55 [Burkholderia phage BcepGomr]
 gi|145321143|gb|ABP63626.1| BcepGomrgp55 [Burkholderia phage BcepGomr]
          Length = 124

 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +  S  ++  +     G   +N     VR+ + PTG +++  +ERS H+NK  A   +
Sbjct: 3   LDLSKLQVSVFSPEPVGF--MNPILRGVRLYYPPTGHIIEESEERSVHRNKHMAMRRM 58


>gi|168487073|ref|ZP_02711581.1| pneumococcal surface protein A [Streptococcus pneumoniae
           CDC1087-00]
 gi|183570000|gb|EDT90528.1| pneumococcal surface protein A [Streptococcus pneumoniae
           CDC1087-00]
          Length = 776

 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 26/128 (20%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKT--EDPHLWQNVIEAK--------MLMRERQH 51
           +L ++ + L       +  + +S L       DP    +    +         L +++  
Sbjct: 296 ELDKKADELQN--KVADLEKEISNLEILLGGADPE--DDTAALQNKLAAKQAELAKKQTE 351

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL 108
           L+  +  +        +     EL  E ++  +     E  + +  ++ E+   +    L
Sbjct: 352 LEKLLDSLD------PEGKTQDELDKEAEEAELDKKADELQNKVADLEKEISNLEI---L 402

Query: 109 SGEADSND 116
            G ADS D
Sbjct: 403 LGGADSED 410


>gi|328955493|ref|YP_004372826.1| ABC transporter related protein [Coriobacterium glomerans PW2]
 gi|328455817|gb|AEB07011.1| ABC transporter related protein [Coriobacterium glomerans PW2]
          Length = 675

 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 8/79 (10%)

Query: 2   KLSRQLNCLGGLF-----DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L+R+L            D      R   L        L+++ +     + E   L   I
Sbjct: 593 ELNRRLKQRRTRLSTVDADLARKRARYDELMAIMSSEGLYEDQVAFNRALAEYGALKKEI 652

Query: 57  SFIKEIQDRLCDNLILLEL 75
           S    +++   D    LE 
Sbjct: 653 SV---LEEEWLDLSAQLEE 668


>gi|284802519|ref|YP_003414384.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578]
 gi|284995661|ref|YP_003417429.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923]
 gi|284058081|gb|ADB69022.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578]
 gi|284061128|gb|ADB72067.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923]
          Length = 650

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +    +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|91774122|ref|YP_566814.1| ATPase AAA-2 [Methanococcoides burtonii DSM 6242]
 gi|91713137|gb|ABE53064.1| Chaperone ClpB/Hsp104 [Methanococcoides burtonii DSM 6242]
          Length = 869

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 13/100 (13%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +R++ L  +  D     + + AK          + I+ +  ++ ++ D  I LELA   
Sbjct: 440 KERVADLEKELADIRAESDAMRAKWQSE-----KDTIANLGSLKQQIEDIKIQLELAENS 494

Query: 80  DDCSILQE--------TSDNLQRIKLEVEYKQFESLLSGE 111
            D  +  +             +  + +++ +Q + LL  E
Sbjct: 495 GDFELASKLKYGSLTPLEHQYKEEETKLQEQQDDMLLKEE 534


>gi|332208409|ref|XP_003253296.1| PREDICTED: pleckstrin homology-like domain family B member 1
           isoform 2 [Nomascus leucogenys]
 gi|332208411|ref|XP_003253297.1| PREDICTED: pleckstrin homology-like domain family B member 1
           isoform 3 [Nomascus leucogenys]
          Length = 1376

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 19/109 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR-----ERQHLDNAISF 58
             +   LG +   +    R+  L  + ++      +  A  L++     ER  L      
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQLQESSREAEMERA--LLQGEREAERALLQKEQKA 772

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           + ++Q++L    + LE  ++E D       ++ L+      E  +F+ L
Sbjct: 773 VDQLQEKL----VALETGIQERDKE-----AEALETETKLFEDLEFQQL 812


>gi|298531050|ref|ZP_07018451.1| ABC transporter related protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509073|gb|EFI32978.1| ABC transporter related protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 651

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNLI 71
            + ++ R   L      P   Q+    + L RE + +    D+ +  ++E++ ++     
Sbjct: 589 LEQSLLRQEELENAMSLPETCQDPDRIRELSREYREVCAQNDSLMHRLEELEQQITQLEA 648

Query: 72  LL 73
             
Sbjct: 649 AK 650


>gi|94971406|ref|YP_593454.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553456|gb|ABF43380.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 900

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNA----IS 57
           +  L+ L  LF        L+ ++       L Q  ++  A+ + RE   L+        
Sbjct: 323 ATALDLLRKLFIKLGQKAYLNEISELLAH-ALVQKGDLKRARDIYRELAELEPENPVHAQ 381

Query: 58  FIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLE 98
             +++  +L D+ +   LA E  +   +++E       I+ E
Sbjct: 382 NYRQLSAKLGDDPLSKPLAKEQANAPMMVEELDSTSAEIEQE 423


>gi|331266325|ref|YP_004325955.1| ABC transporter ATP-binding protein, ATPase components of ABC
           transporters with duplicated ATPase domains
           [Streptococcus oralis Uo5]
 gi|326682997|emb|CBZ00614.1| ABC transporter ATP-binding protein, ATPase components of ABC
           transporters with duplicated ATPase domains
           [Streptococcus oralis Uo5]
          Length = 633

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 23/108 (21%)

Query: 15  DWDNAVQRLSFLNT----------KTEDPHLWQN-------VIEAKMLMRERQHLDNAIS 57
           D+D  V++ + +            + ++P    +         EA+ LMR+ + L+  I 
Sbjct: 524 DYDYYVEKKAEVEAIQTEEASTSNQAKEPSPVNDYQTQKESQKEARKLMRQIESLEAEIE 583

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            ++     +       E  LE +D   L E    L +I    E    E
Sbjct: 584 ELETQSQAIS------EQMLETNDAEKLMELQAELDKISHRQEEAMLE 625


>gi|154290808|ref|XP_001545994.1| hypothetical protein BC1G_15443 [Botryotinia fuckeliana B05.10]
 gi|150847394|gb|EDN22587.1| hypothetical protein BC1G_15443 [Botryotinia fuckeliana B05.10]
          Length = 161

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 220 EIEISESDCRIDTYRASGAGG---QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           EIE++  +        SG       + N T SAV++ HIPTG+V++ Q  RS+ +N+ 
Sbjct: 5   EIEVNGREEVERCTNGSGTFCLEYPYGNKTSSAVQLKHIPTGMVLKVQATRSRTQNQK 62


>gi|33592829|ref|NP_880473.1| ABC transporter ATP-binding protein [Bordetella pertussis Tohama I]
 gi|33572477|emb|CAE42048.1| probable ABC transporter ATP-binding protein [Bordetella pertussis
           Tohama I]
 gi|332382242|gb|AEE67089.1| ABC transporter ATP-binding protein [Bordetella pertussis CS]
          Length = 641

 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER----QHLDNAI 56
           L+ +L  +    D + A  RL  L+    D  L+ +      + +M E     + L++  
Sbjct: 565 LAAKLAKVEA--DMERARARLQELDAVIADADLYSDARRTERQQVMTEHGESGKRLNDLE 622

Query: 57  SFIKEIQDRLCDNLI 71
               EIQ  L +   
Sbjct: 623 EQWLEIQQALEEIEQ 637


>gi|302697897|ref|XP_003038627.1| hypothetical protein SCHCODRAFT_64474 [Schizophyllum commune H4-8]
 gi|300112324|gb|EFJ03725.1| hypothetical protein SCHCODRAFT_64474 [Schizophyllum commune H4-8]
          Length = 1045

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 26/128 (20%)

Query: 15  DWDNAVQRLSF-LNTKTEDPHLWQNV-----IEAKMLMRERQHLDNAISFIKE------- 61
           D +  + RLS  LN    +  LW++        A+ L  E   L   I+  +        
Sbjct: 756 DLETKIGRLSRRLNFLMTESDLWRDKFVTFEQYAEKLSAEANQLRAKINKEQRETKRLSG 815

Query: 62  -----------IQDRLCDNLIL--LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
                      +Q +L D        +A  E+    ++        +  EVE +   +L 
Sbjct: 816 LVSLTAQEKGRLQSQLRDTEAEHKKAMAELEEMRETMERMELERAEMVAEVEAQIERALA 875

Query: 109 SGEADSND 116
           S   D +D
Sbjct: 876 SMAVDIDD 883


>gi|328856522|gb|EGG05643.1| hypothetical protein MELLADRAFT_116786 [Melampsora larici-populina
           98AG31]
          Length = 1443

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 47/109 (43%), Gaps = 11/109 (10%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLILLELA- 76
           A  ++  L  +        + + A+ ++ +    +  +   I +++  + D   L ELA 
Sbjct: 598 AEAQIEELKQQL------DDSMGAEDMLEQLTERNLTLNEKIDDMKMIIEDLEALKELAD 651

Query: 77  -LEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            LEE+     ++  + +  + ++L  + K+ ESL    AD  +  L+  
Sbjct: 652 ELEENHVETEKQMQEEIDFKDLQLRDQRKRNESLEESVADYENTILQFR 700



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 22/131 (16%)

Query: 2   KLSRQLNCLGGLFDWDNA--VQRLSFLNTKTEDPHLWQN-VIEAKMLMRERQHLDNAISF 58
           +L   L  +  L    +    +++S L  +     L      E  +LM E    +  I  
Sbjct: 548 RLKEALARMRDLSHEADLASRKKISDLEQEL---DLSAELQGEYSVLMNELSIAEAQIE- 603

Query: 59  IKEIQDRLCD---NLILLELALEE--------DDCSILQETSDNLQRIKLEVEYK--QFE 105
             E++ +L D      +LE   E         DD  ++ E  + L+ +  E+E    + E
Sbjct: 604 --ELKQQLDDSMGAEDMLEQLTERNLTLNEKIDDMKMIIEDLEALKELADELEENHVETE 661

Query: 106 SLLSGEADSND 116
             +  E D  D
Sbjct: 662 KQMQEEIDFKD 672



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 16/101 (15%)

Query: 20  VQRLSFLNTKTEDPHLWQN------VIEAKMLMRERQHLDNAISFIK----EIQDRLCDN 69
             ++  L    ED   W N        +      E + L      ++    E ++RL D 
Sbjct: 415 RDKIRELEKVKEDTEDWNNVVKPKLQAKLNECTEEIKALKKLNKELEASQQEAENRLADF 474

Query: 70  LILLELALEEDDCSILQETSDNLQRI----KLEVEYKQFES 106
              +ELA    D  + +E  D  + +    K E+E  + E 
Sbjct: 475 SDEVELATL--DKEMAEERLDQTEVLMVTMKEELENLKVEL 513


>gi|33601163|ref|NP_888723.1| ABC transporter ATP-binding protein [Bordetella bronchiseptica
           RB50]
 gi|33575598|emb|CAE32676.1| probable ABC transporter ATP-binding protein [Bordetella
           bronchiseptica RB50]
          Length = 641

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER----QHLDNAI 56
           L+ +L  +    D + A  RL  L+    D  L+ +      + +M E     + L++  
Sbjct: 565 LAAKLAKVEA--DMERARARLQELDAVIADADLYSDARRTERQQVMTEHGESGKRLNDLE 622

Query: 57  SFIKEIQDRLCDNLI 71
               EIQ  L +   
Sbjct: 623 EQWLEIQQALEEIEQ 637


>gi|16804112|ref|NP_465597.1| hypothetical protein lmo2073 [Listeria monocytogenes EGD-e]
 gi|224501129|ref|ZP_03669436.1| hypothetical protein LmonFR_01170 [Listeria monocytogenes FSL
           R2-561]
 gi|254827039|ref|ZP_05231726.1| ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|16411543|emb|CAD00151.1| lmo2073 [Listeria monocytogenes EGD-e]
 gi|258599421|gb|EEW12746.1| ABC transporter [Listeria monocytogenes FSL N3-165]
          Length = 650

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +    +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|27806009|ref|NP_776819.1| myosin-X [Bos taurus]
 gi|17433133|sp|P79114|MYO10_BOVIN RecName: Full=Myosin-X; AltName: Full=Unconventional myosin-10
 gi|1755049|gb|AAB39486.1| myosin X [Bos taurus]
          Length = 2052

 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 12/110 (10%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN--AISFIKEIQDRLCDNLILLE 74
           + A ++   L    ++         A  L RE +       +  I  ++  + D   + E
Sbjct: 853 EEAARKQRELEALQQE------SQRAAELSRELEKQKENKQVEEILRLEKEIEDLQRMKE 906

Query: 75  LAL----EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
                  E     + Q   + L+R++ E      E L S   D  D  + 
Sbjct: 907 RQELSLTEASLQKLQQLRDEELRRLEDEACRAAQEFLESLNFDEIDECVR 956


>gi|296475667|gb|DAA17782.1| myosin-X [Bos taurus]
          Length = 2052

 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 12/110 (10%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN--AISFIKEIQDRLCDNLILLE 74
           + A ++   L    ++         A  L RE +       +  I  ++  + D   + E
Sbjct: 853 EEAARKQRELEALQQE------SQRAAELSRELEKQKENKQVEEILRLEKEIEDLQRMKE 906

Query: 75  LAL----EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
                  E     + Q   + L+R++ E      E L S   D  D  + 
Sbjct: 907 RQELSLTEASLQKLQQLRDEELRRLEDEACRAAQEFLESLNFDEIDECVR 956


>gi|283783979|ref|YP_003363844.1| peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
 gi|282947433|emb|CBG86979.1| putative peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
          Length = 139

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THI--PT 257
           + I+E +  I   RA GAGGQHVN   +A+ +                      H+  P 
Sbjct: 8   VSIAEDELEITAIRAQGAGGQHVNKASTAIHLRFDIRASGLPEYYKERLLAASHHLISPD 67

Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G ++++ Q+ RSQ  N+  A   L A + EL ++++   A
Sbjct: 68  GIIIIKAQEYRSQTLNREAALARLVAVIKELTVEQKSRRA 107


>gi|323935032|gb|EGB31405.1| RF-1 domain-containing protein [Escherichia coli E1520]
          Length = 140

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKEHLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQKAR 105


>gi|169833489|ref|YP_001694024.1| histidine kinase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995991|gb|ACA36603.1| histidine kinase [Streptococcus pneumoniae Hungary19A-6]
          Length = 446

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 40/263 (15%)

Query: 10  LGGLFDWDN-AVQRL-SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +GG+   D    ++L   LN +          +  + + R  +H++     I+  +    
Sbjct: 206 MGGIKKLDTYLKEKLQEELNQEQT--------LRYRDMERYSRHIEELYKEIRSFRHDYT 257

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + L  L L +EE+D   ++E  D++ R          + L   + D     + +   A  
Sbjct: 258 NLLTSLRLGIEEEDMEQIKEIYDSVLRDSS-------QKLQDNKYD-LGRLVNIRDRA-- 307

Query: 128 TESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
                  ++L   + +  EK   F  E  E    E   +     ++        +  +  
Sbjct: 308 -----LKSLLAGKFIKAREKNIVFNVEVPEEIQVEGMSLLDFLTIVS-------ILCDNA 355

Query: 187 VHRLVRIS-PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           +      S P+ S +         ++         I+IS     I ++ AS  G +    
Sbjct: 356 IEASAEASQPHVSIAFLKNGAQETFIIENSIKEEGIDIS----EIFSFGASSKGEERGVG 411

Query: 246 TDSAVRIT--HIPTGVVVQCQQE 266
             + ++I   H  T +   CQ +
Sbjct: 412 LYTVMKIVESHPNTNLNTTCQNQ 434


>gi|56418775|ref|YP_146093.1| ABC transporter ATP-binding protein [Geobacillus kaustophilus
           HTA426]
 gi|56378617|dbj|BAD74525.1| ABC transporter (ATP-binding protein) [Geobacillus kaustophilus
           HTA426]
          Length = 641

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 15/43 (34%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
                ++L+ L+ +  DP +  +    +  ++    L      
Sbjct: 94  LLGLEKQLAELSMQLGDPDVLADPARYEKTLKTYDELQEQYKE 136



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 4/44 (9%), Positives = 16/44 (36%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
                 +++ +  +  DP ++ +    + L +E       +  +
Sbjct: 587 IATLEAQIAEIEQQLCDPSVYGDYETMQRLTQENDERKQRVEML 630


>gi|33596608|ref|NP_884251.1| ABC transporter ATP-binding protein [Bordetella parapertussis
           12822]
 gi|33573309|emb|CAE37292.1| probable ABC transporter ATP-binding protein [Bordetella
           parapertussis]
          Length = 641

 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER----QHLDNAI 56
           L+ +L  +    D + A  RL  L+    D  L+ +      + +M E     + L++  
Sbjct: 565 LAAKLAKVEA--DMERARARLQELDAVIADADLYSDARRTERQQVMTEHGESGKRLNDLE 622

Query: 57  SFIKEIQDRLCDNLI 71
               EIQ  L +   
Sbjct: 623 EQWLEIQQALEEIEQ 637


>gi|15902508|ref|NP_358058.1| histidine kinase [Streptococcus pneumoniae R6]
 gi|116515327|ref|YP_815977.1| histidine kinase BlpH, putative [Streptococcus pneumoniae D39]
 gi|149026411|ref|ZP_01836549.1| histidine kinase BlpH, putative [Streptococcus pneumoniae
           SP23-BS72]
 gi|168490578|ref|ZP_02714721.1| histidine kinase [Streptococcus pneumoniae CDC0288-04]
 gi|225858364|ref|YP_002739874.1| histidine kinase [Streptococcus pneumoniae 70585]
 gi|10303393|emb|CAC10171.1| histidine kinase [Streptococcus pneumoniae]
 gi|15458033|gb|AAK99268.1| Histidine kinase [Streptococcus pneumoniae R6]
 gi|116075903|gb|ABJ53623.1| histidine kinase BlpH, putative [Streptococcus pneumoniae D39]
 gi|147929294|gb|EDK80294.1| histidine kinase BlpH, putative [Streptococcus pneumoniae
           SP23-BS72]
 gi|156465257|gb|ABU68075.1| SpiH [Streptococcus pneumoniae]
 gi|156465270|gb|ABU68087.1| SpiH [Streptococcus pneumoniae]
 gi|183574836|gb|EDT95364.1| histidine kinase [Streptococcus pneumoniae CDC0288-04]
 gi|225721569|gb|ACO17423.1| histidine kinase [Streptococcus pneumoniae 70585]
 gi|301799593|emb|CBW32146.1| sensor histidine kinase BlpH [Streptococcus pneumoniae OXC141]
 gi|332203697|gb|EGJ17764.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
           protein [Streptococcus pneumoniae GA47368]
          Length = 446

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 40/263 (15%)

Query: 10  LGGLFDWDN-AVQRL-SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +GG+   D    ++L   LN +          +  + + R  +H++     I+  +    
Sbjct: 206 MGGIKKLDTYLKEKLQEELNQEQT--------LRYRDMERYSRHIEELYKEIRSFRHDYT 257

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + L  L L +EE+D   ++E  D++ R          + L   + D     + +   A  
Sbjct: 258 NLLTSLRLGIEEEDMEQIKEIYDSVLRDSS-------QKLQDNKYD-LGRLVNIRDRA-- 307

Query: 128 TESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
                  ++L   + +  EK   F  E  E    E   +     ++        +  +  
Sbjct: 308 -----LKSLLAGKFIKAREKNIVFNVEVPEEIQVEGMSLLDFLTIVS-------ILCDNA 355

Query: 187 VHRLVRIS-PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           +      S P+ S +         ++         I+IS     I ++ AS  G +    
Sbjct: 356 IEASAEASQPHVSIAFLKNGAQETFIIENSIKEEGIDIS----EIFSFGASSKGEERGVG 411

Query: 246 TDSAVRIT--HIPTGVVVQCQQE 266
             + ++I   H  T +   CQ +
Sbjct: 412 LYTVMKIVESHPNTNLNTTCQNQ 434


>gi|261418563|ref|YP_003252245.1| ABC transporter [Geobacillus sp. Y412MC61]
 gi|297528591|ref|YP_003669866.1| ABC transporter [Geobacillus sp. C56-T3]
 gi|319765377|ref|YP_004130878.1| ABC transporter [Geobacillus sp. Y412MC52]
 gi|261375020|gb|ACX77763.1| ABC transporter related protein [Geobacillus sp. Y412MC61]
 gi|297251843|gb|ADI25289.1| ABC transporter related protein [Geobacillus sp. C56-T3]
 gi|317110243|gb|ADU92735.1| ABC transporter related protein [Geobacillus sp. Y412MC52]
          Length = 641

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 15/43 (34%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
                ++L+ L+ +  DP +  +    +  ++    L      
Sbjct: 94  LLGLEKQLAELSMQLGDPDVLADPARYEKTLKTYDELQEQYKE 136



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 4/44 (9%), Positives = 16/44 (36%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
                 +++ +  +  DP ++ +    + L +E       +  +
Sbjct: 587 IAALEAQIAEIEQQLCDPSVYGDYETMQRLTQENDERKQRVEML 630


>gi|24111627|ref|NP_706137.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
           301]
 gi|30061748|ref|NP_835919.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
           2457T]
 gi|110804243|ref|YP_687763.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella
           flexneri 5 str. 8401]
 gi|24050398|gb|AAN41844.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30039990|gb|AAP15724.1| hypothetical protein S0184 [Shigella flexneri 2a str. 2457T]
 gi|110613791|gb|ABF02458.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|281599547|gb|ADA72531.1| Peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2002017]
 gi|313646747|gb|EFS11206.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
           2457T]
 gi|332762021|gb|EGJ92292.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2747-71]
 gi|332762196|gb|EGJ92465.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 4343-70]
 gi|332765041|gb|EGJ95269.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-671]
 gi|332768695|gb|EGJ98875.1| putative-tRNA hydrolase domain protein [Shigella flexneri 2930-71]
 gi|333009346|gb|EGK28802.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-218]
 gi|333022233|gb|EGK41472.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-304]
          Length = 140

 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTKEQKAR 105


>gi|123443461|ref|YP_001007434.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122090422|emb|CAL13290.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 138

 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + + +S+  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SNNVSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLSLNSHLM 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           T    ++++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR
Sbjct: 65  TAEGVIIIKAQEYRSQDMNREAALARLVALIRQSMVVEKTRRATKPTK-------GSKIR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|328957960|ref|YP_004375346.1| protein of unknown function DUF214 [Carnobacterium sp. 17-4]
 gi|328674284|gb|AEB30330.1| protein of unknown function DUF214 [Carnobacterium sp. 17-4]
          Length = 1090

 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 13/97 (13%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM-LMRERQHLDNAISF-IKEIQDRLCDN 69
           GL D + A   L+    +  D         A+  L +E+ +    ++  +++++    D 
Sbjct: 445 GLADIEAAKTTLANGEAQLAD---------AQEQLNQEKANGQAELATALEKLESGRADY 495

Query: 70  L-ILLELALEEDDCSI-LQETSDNLQRIKLEVEYKQF 104
              L E   E  D    + +    L   K E+E  + 
Sbjct: 496 ETALAEFEQESADAEKKISDGEAELADAKKELEELEM 532


>gi|156094577|ref|XP_001613325.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148802199|gb|EDL43598.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 196

 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLR 281
             D      + +G GGQ VN T++ V I +       ++++C + R   KN+  A  +L 
Sbjct: 76  PKDIEETFIKGTGKGGQKVNKTNNCVMIRYASGEGEKIIIKCHKHRCLQKNRIYARELLY 135

Query: 282 AKL 284
            K+
Sbjct: 136 DKI 138


>gi|12719433|ref|NP_075504.1| hypothetical protein phiSLTp42 [Staphylococcus phage phiSLT]
 gi|21283127|ref|NP_646215.1| hypothetical protein MW1398 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49483693|ref|YP_040917.1| hypothetical protein SAR1516 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49485841|ref|YP_043062.1| hypothetical protein SAS0935 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651297|ref|YP_185262.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus subsp. aureus COL]
 gi|66395517|ref|YP_239859.1| ORF009 [Staphylococcus phage 42E]
 gi|66395666|ref|YP_240005.1| ORF010 [Staphylococcus phage 47]
 gi|87161729|ref|YP_494098.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88195248|ref|YP_500051.1| hypothetical protein SAOUHSC_01535 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|215401149|ref|YP_002332404.1| major head protein [Staphylococcus phage phiSauS-IPLA35]
 gi|253315474|ref|ZP_04838687.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|284024508|ref|ZP_06378906.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|295428017|ref|ZP_06820649.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296276331|ref|ZP_06858838.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus MR1]
 gi|12697863|dbj|BAB21735.1| unnamed protein product [Staphylococcus phage phiSLT]
 gi|21204567|dbj|BAB95263.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
 gi|49241822|emb|CAG40514.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244284|emb|CAG42711.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57285483|gb|AAW37577.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus subsp. aureus COL]
 gi|62636010|gb|AAX91121.1| ORF009 [Staphylococcus phage 42E]
 gi|62636090|gb|AAX91201.1| ORF010 [Staphylococcus phage 47]
 gi|87127703|gb|ABD22217.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87202806|gb|ABD30616.1| conserved hypothetical phage protein [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|215260500|gb|ACJ64630.1| gp41 [Staphylococcus phage phiSauS-IPLA35]
 gi|295128375|gb|EFG58009.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|315128435|gb|EFT84443.1| hypothetical protein CGSSa03_13332 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315197737|gb|EFU28071.1| hypothetical protein CGSSa01_10798 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|329729407|gb|EGG65812.1| phage capsid family [Staphylococcus aureus subsp. aureus 21189]
 gi|329730628|gb|EGG67013.1| phage capsid family [Staphylococcus aureus subsp. aureus 21193]
          Length = 387

 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  SDN + +K + E+ +   L + 
Sbjct: 56  VERQVQDIEE-KEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNE 103


>gi|291616369|ref|YP_003519111.1| YaeJ [Pantoea ananatis LMG 20103]
 gi|291151399|gb|ADD75983.1| YaeJ [Pantoea ananatis LMG 20103]
 gi|327392820|dbj|BAK10242.1| class I peptide chain release factor YaeJ [Pantoea ananatis
           AJ13355]
          Length = 136

 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 24/103 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  +E+ +S+  +   RA G+GGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVELPDSEIELTAIRAQGSGGQHVNKTSTAIHLRFDIAASSLPPFYKERLLNASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           TG   V+++ Q+ RSQ  N+  A   L   + EL   ++   +
Sbjct: 65  TGDGTVIIKAQEYRSQEMNREAALQRLVNLIRELTTVEKVRRS 107


>gi|88706760|ref|ZP_01104461.1| ABC transporter, ATP-binding protein [Congregibacter litoralis
           KT71]
 gi|88698941|gb|EAQ96059.1| ABC transporter, ATP-binding protein [Congregibacter litoralis
           KT71]
          Length = 629

 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQH----LDNAISFIKEIQDR 65
           D +    R   L T   DP  ++ +  E K L+ E       L+  I    E+++R
Sbjct: 573 DIEALESRQGELETLCADPAFYERDPREVKDLLAELASIGGTLEEKIERWTELEER 628


>gi|110801619|ref|YP_698735.1| clpB protein [Clostridium perfringens SM101]
 gi|110682120|gb|ABG85490.1| clpB protein [Clostridium perfringens SM101]
          Length = 866

 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL+ L  +     L     E      +E+ H    IS I++++  L +   L+E 
Sbjct: 440 DASKERLAALEKELA--ELQDKNDEMTIKYEKEKSH----ISAIRDLKAELDEARGLVEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEE----SMEKDNENALL 534


>gi|17229871|ref|NP_486419.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
 gi|17131471|dbj|BAB74078.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
          Length = 1344

 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 20/125 (16%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L  + D    V  +  L  K  +            L +  Q L+  I    ++++ L 
Sbjct: 269 TNLLQVLDPLEIVNVIQALEAKVAEQTF--------QLQQTNQQLEAEIKQRHQVEESLR 320

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE------ADSNDAYLEV 121
                LEL + E    ++Q         +L    +Q ++L          AD    Y++V
Sbjct: 321 QVQQELELRVAERTAELVQ------ANARLRRREQQLQALFDQALDAILIADDEGCYVDV 374

Query: 122 HAGAG 126
           +A A 
Sbjct: 375 NAAAC 379


>gi|148267496|ref|YP_001246439.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393550|ref|YP_001316225.1| phage major capsid protein HK97 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|147740565|gb|ABQ48863.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946002|gb|ABR51938.1| phage major capsid protein HK97 [Staphylococcus aureus subsp.
           aureus JH1]
          Length = 387

 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  SDN + +K + E+ +   L + 
Sbjct: 56  VERQVQDIEE-KEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNE 103


>gi|221194820|ref|ZP_03567877.1| ABC transporter, ATP-binding protein [Atopobium rimae ATCC 49626]
 gi|221185724|gb|EEE18114.1| ABC transporter, ATP-binding protein [Atopobium rimae ATCC 49626]
          Length = 678

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 5/71 (7%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            ++L  +        A QR   L     D  L+ +  +    M E   L   I     ++
Sbjct: 608 KKRLKEVEAALQP--AHQRYDELMALMADEDLYNDAEKFDACMAEYNALAKKIP---ALE 662

Query: 64  DRLCDNLILLE 74
               +    +E
Sbjct: 663 QEWLELSEKME 673


>gi|16120118|ref|NP_395706.1| hypothetical protein VNG6173C [Halobacterium sp. NRC-1]
 gi|169237376|ref|YP_001690580.1| SMC-like protein sph2 [Halobacterium salinarum R1]
 gi|10584228|gb|AAG20841.1| Vng6173c [Halobacterium sp. NRC-1]
 gi|167728603|emb|CAP15443.1| SMC-like protein sph2 [Halobacterium salinarum R1]
          Length = 667

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D   Q +  L  + E      +  EA+ + +    L+     ++ I +R+       E
Sbjct: 196 DLDECDQEIEELRNQLEQ--FDADPEEAEEIEQALTSLEERKQELESITNRIRTQEDTRE 253

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
              +E   S LQ   + ++  + E++  +   
Sbjct: 254 ALRDE--QSELQTEREAIETSEEELKRIETRL 283


>gi|323975640|gb|EGB70736.1| RF-1 domain-containing protein [Escherichia coli TW10509]
          Length = 140

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|170680631|ref|YP_001742320.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
 gi|293418077|ref|ZP_06660699.1| yaeJ protein [Escherichia coli B185]
 gi|331651097|ref|ZP_08352125.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
 gi|170518349|gb|ACB16527.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
 gi|291430795|gb|EFF03793.1| yaeJ protein [Escherichia coli B185]
 gi|309700400|emb|CBI99688.1| putative peptidyl-tRNA hydrolase [Escherichia coli ETEC H10407]
 gi|331051551|gb|EGI23600.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
          Length = 140

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQKAR 105


>gi|29028650|ref|NP_803339.1| SLT orf 37-like protein [Staphylococcus phage phi 12]
 gi|161509679|ref|YP_001575338.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|209363590|ref|YP_002268008.1| putative capsid protein [Staphylococcus phage phi2958PVL]
 gi|257432455|ref|ZP_05608818.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|258420297|ref|ZP_05683244.1| bacteriophage capsid protein [Staphylococcus aureus A9719]
 gi|258448836|ref|ZP_05696946.1| bacteriophage capsid protein [Staphylococcus aureus A6224]
 gi|282919222|ref|ZP_06326957.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           C427]
 gi|294848477|ref|ZP_06789223.1| phage major capsid protein [Staphylococcus aureus A9754]
 gi|295407558|ref|ZP_06817351.1| bacteriophage capsid protein [Staphylococcus aureus A8819]
 gi|297207830|ref|ZP_06924264.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297246588|ref|ZP_06930421.1| bacteriophage capsid protein [Staphylococcus aureus A8796]
 gi|297591012|ref|ZP_06949650.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300911916|ref|ZP_07129359.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|18920574|gb|AAL82314.1| SLT orf 37-like protein [Staphylococcus phage phi 12]
 gi|160368488|gb|ABX29459.1| possible bacteriophage capsid protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|208973091|dbj|BAG74407.1| putative capsid protein [Staphylococcus phage phi2958PVL]
 gi|257283334|gb|EEV13466.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257843722|gb|EEV68124.1| bacteriophage capsid protein [Staphylococcus aureus A9719]
 gi|257857873|gb|EEV80764.1| bacteriophage capsid protein [Staphylococcus aureus A6224]
 gi|282317032|gb|EFB47406.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           C427]
 gi|294824503|gb|EFG40926.1| phage major capsid protein [Staphylococcus aureus A9754]
 gi|294967577|gb|EFG43613.1| bacteriophage capsid protein [Staphylococcus aureus A8819]
 gi|296887546|gb|EFH26445.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297176546|gb|EFH35811.1| bacteriophage capsid protein [Staphylococcus aureus A8796]
 gi|297575898|gb|EFH94614.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300886162|gb|EFK81364.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333118|gb|ADL23311.1| putative phage capsid protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|320140400|gb|EFW32255.1| phage capsid family protein [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142756|gb|EFW34559.1| phage capsid family protein [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 402

 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  SDN + +K + E+ +   L + 
Sbjct: 71  VERQVQDIEE-KEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNE 118


>gi|282911086|ref|ZP_06318888.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324781|gb|EFB55091.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312438084|gb|ADQ77155.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH60]
          Length = 402

 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++   K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEYIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  SDN + +K + E+ +   L + 
Sbjct: 71  VERQVQDIEE-KEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNE 118


>gi|315269287|gb|ADT96140.1| Class I peptide chain release factor [Shewanella baltica OS678]
          Length = 143

 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E++      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 13  VELQENEIEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEFYQERLLNKADHRITKS 72

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             ++++CQ  RSQ  N+  A     A +  +   +++ I             G Q R 
Sbjct: 73  GKIIIKCQASRSQDANRQTALEQFIALVASVGEVQKKRIPTRATK-------GSQTRR 123


>gi|149012594|ref|ZP_01833591.1| histidine kinase BlpH, putative [Streptococcus pneumoniae
           SP19-BS75]
 gi|147763399|gb|EDK70336.1| histidine kinase BlpH, putative [Streptococcus pneumoniae
           SP19-BS75]
          Length = 446

 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 40/263 (15%)

Query: 10  LGGLFDWDN-AVQRL-SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +GG+   D    ++L   LN +          +  + + R  +H++     I+  +    
Sbjct: 206 MGGIKKLDTYLKEKLQEELNQEQT--------LRYRDMERYSRHIEELYKEIRSFRHDYT 257

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + L  L L +EE+D   ++E  D++ R          + L   + D     + +   A  
Sbjct: 258 NLLTSLRLGIEEEDMEQIKEIYDSVLRDSS-------QKLQDNKYD-LGRLVNIRDRA-- 307

Query: 128 TESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
                  ++L   + +  EK   F  E  E    E   +     ++        +  +  
Sbjct: 308 -----LKSLLAGKFIKAREKNIVFNVEVPEEIQVEGMSLLDFLTIVS-------ILCDNA 355

Query: 187 VHRLVRIS-PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           +      S P+ S +         ++         I+IS     I ++ AS  G +    
Sbjct: 356 IEASAEASQPHVSIAFLKNGAQETFIIENSIKEEGIDIS----EIFSFGASSKGEERGVG 411

Query: 246 TDSAVRIT--HIPTGVVVQCQQE 266
             + ++I   H  T +   CQ +
Sbjct: 412 LYTVMKIVESHPNTNLNTTCQNQ 434


>gi|260842424|ref|YP_003220202.1| hypothetical protein ECO103_0190 [Escherichia coli O103:H2 str.
           12009]
 gi|257757571|dbj|BAI29068.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
          Length = 140

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|149041490|gb|EDL95331.1| pleckstrin homology-like domain, family B, member 1 [Rattus
           norvegicus]
          Length = 1203

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 602 EERAQVLGRV---EQLKVRVKELEQQL--------QEAAREAEMERALLQGEREAERALL 650

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + +D L+      E  +F+ L
Sbjct: 651 QKEQRAMDQLQEKLVALETGIQKERDKEADALETETKLFEDLEFQQL 697


>gi|114640651|ref|XP_001162312.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 6 [Pan troglodytes]
          Length = 1330

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|114640653|ref|XP_001162786.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 16 [Pan troglodytes]
 gi|114640655|ref|XP_001162862.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 18 [Pan troglodytes]
 gi|114640657|ref|XP_001162931.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 20 [Pan troglodytes]
          Length = 1319

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|293394733|ref|ZP_06639025.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
 gi|291422859|gb|EFE96096.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
          Length = 137

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 24/120 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I++ +  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVAIADHEIELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALNHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           TG   V+++ Q+ RSQ  N+  A   L A + +  + ++   A        +     ++R
Sbjct: 65  TGDGVVIIKAQEYRSQELNREAALARLVALIRQAMVVEKTRKATKPSKGAKKRRLENKVR 124


>gi|114640661|ref|XP_001162125.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 3 [Pan troglodytes]
          Length = 1257

 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|254826171|ref|ZP_05231172.1| ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|293595411|gb|EFG03172.1| ABC transporter [Listeria monocytogenes FSL J1-194]
          Length = 650

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EQISEELESM 650


>gi|168482770|ref|ZP_02707722.1| histidine kinase [Streptococcus pneumoniae CDC1873-00]
 gi|172043797|gb|EDT51843.1| histidine kinase [Streptococcus pneumoniae CDC1873-00]
          Length = 446

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 40/263 (15%)

Query: 10  LGGLFDWDN-AVQRL-SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +GG+   D    ++L   LN +          +  + + R  +H++     I+  +    
Sbjct: 206 MGGIKKLDTYLKEKLQEELNQEQT--------LRYRDMERYSRHIEELYKEIRSFRHDYT 257

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + L  L L +EE+D   ++E  D++ R          + L   + D     + +   A  
Sbjct: 258 NLLTSLRLGIEEEDMEQIKEIYDSVLRDSS-------QKLQDNKYD-LGRLVNIRDRA-- 307

Query: 128 TESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
                  ++L   + +  EK   F  E  E    E   +     ++        +  +  
Sbjct: 308 -----LKSLLAGKFIKAREKNIVFNVEVPEEIQVEGMSLLDFLTIVS-------ILCDNA 355

Query: 187 VHRLVRIS-PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           +      S P+ S +         ++         I+IS     I ++ AS  G +    
Sbjct: 356 IEASAEASQPHVSIAFLKNGAQETFIIENSIKEEGIDIS----EIFSFGASSKGEERGVG 411

Query: 246 TDSAVRIT--HIPTGVVVQCQQE 266
             + ++I   H  T +   CQ +
Sbjct: 412 LYTVMKIVESHPNTNLNTTCQNQ 434


>gi|254933501|ref|ZP_05266860.1| ABC transporter [Listeria monocytogenes HPB2262]
 gi|293585065|gb|EFF97097.1| ABC transporter [Listeria monocytogenes HPB2262]
 gi|332312522|gb|EGJ25617.1| ABC transporter related protein [Listeria monocytogenes str. Scott
           A]
          Length = 650

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EQISEELESM 650


>gi|114640645|ref|XP_001162477.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 9 [Pan troglodytes]
          Length = 1381

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|256080173|ref|XP_002576357.1| restin-like [Schistosoma mansoni]
 gi|238661623|emb|CAZ32594.1| restin-like [Schistosoma mansoni]
          Length = 1450

 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 14/137 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT-KTEDPHLWQNV----IEAKMLMRERQHLD---- 53
           L  Q+  L      +    R+  L   K +   L +N      +A  L RE   L     
Sbjct: 329 LHDQIEALK--MKREEDKTRIQELERIKIQFTQLEENRRLMREQAAELQREIAQLKTEKA 386

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFES-LLSG 110
                    +D + + +  +E+A  + +     L+  +  ++ +K +VE    E+ +L  
Sbjct: 387 ETKEAFDRYRDEVAEMVESVEMATLDKEMAEEKLESLTTEIELLKEQVEELTLENQILKE 446

Query: 111 EADSNDAYLEVHAGAGG 127
           E++       +    GG
Sbjct: 447 ESEEKGGATTLPGADGG 463


>gi|290992673|ref|XP_002678958.1| hypothetical protein NAEGRDRAFT_79155 [Naegleria gruberi]
 gi|284092573|gb|EFC46214.1| hypothetical protein NAEGRDRAFT_79155 [Naegleria gruberi]
          Length = 1304

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 6/82 (7%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE--IQDRLCDNLILLELALEEDD 81
                ++EDP       E   + R+   L N     K   +++   D   L  +  E D 
Sbjct: 856 EQFEKESEDPDFIA--AEIGNIQRKFYDLQNKYEKFKTIILKETFTDLEDLETMYNEAD- 912

Query: 82  CSILQETSDNLQRIKLEVEYKQ 103
            ++L E  + L       E  +
Sbjct: 913 -AMLNEAKEALASFIASEEKTE 933


>gi|78355249|ref|YP_386698.1| hypothetical protein Dde_0202 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217654|gb|ABB37003.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 143

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 33/96 (34%), Gaps = 25/96 (26%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI------------------ 255
            +DD   + I E +      R SG GGQHVN T S V +                     
Sbjct: 5   QLDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKERIASR 64

Query: 256 -------PTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
                     + V C   RSQH N+  A   L A L
Sbjct: 65  LASRISSAGELAVSCADGRSQHANRRTALQRLAALL 100


>gi|68533599|gb|AAH98586.1| PHLDB1 protein [Homo sapiens]
 gi|167887653|gb|ACA06043.1| pleckstrin homology-like domain family B member 1 variant 3 [Homo
           sapiens]
          Length = 995

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|119587809|gb|EAW67405.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_e
           [Homo sapiens]
          Length = 1019

 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|114640639|ref|XP_001162204.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 4 [Pan troglodytes]
 gi|114640641|ref|XP_001162275.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 5 [Pan troglodytes]
          Length = 1377

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|295702444|ref|YP_003595519.1| putative ABC transporter ATP-binding protein [Bacillus megaterium
           DSM 319]
 gi|294800103|gb|ADF37169.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium
           DSM 319]
          Length = 644

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                + L  L TK  DP ++ + ++ + L +E   L 
Sbjct: 94  LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQ 131


>gi|114640649|ref|XP_001162611.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 12 [Pan troglodytes]
          Length = 1366

 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|299756035|ref|XP_001829048.2| hypothetical protein CC1G_01728 [Coprinopsis cinerea okayama7#130]
 gi|298411493|gb|EAU92683.2| hypothetical protein CC1G_01728 [Coprinopsis cinerea okayama7#130]
          Length = 996

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
           + L      ++E++ +L D   LL+   EE    + +E       ++  ++  + +S L+
Sbjct: 287 KELKEDTKALEELRGQLKDAEDLLK-VKEEAVTDLEEELEKLKASLQSALDDVESKSALT 345

Query: 110 GEADSNDAYLE 120
            E     A LE
Sbjct: 346 DELTKAKAELE 356


>gi|294497079|ref|YP_003560779.1| putative ABC transporter ATP-binding protein [Bacillus megaterium
           QM B1551]
 gi|294347016|gb|ADE67345.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium
           QM B1551]
          Length = 644

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                + L  L TK  DP ++ + ++ + L +E   L 
Sbjct: 94  LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQ 131


>gi|194212744|ref|XP_001501037.2| PREDICTED: similar to KIAA0638 protein [Equus caballus]
          Length = 1537

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 20/147 (13%)

Query: 4    SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 881  EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 929

Query: 64   DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
             +    +  L+     LE        + ++ L+      E  +F+ L        +  L 
Sbjct: 930  QKEQKAVDQLQEKLVTLETGIQKERDKEAEALETETKLFEDLEFQQLERESRVEEEREL- 988

Query: 121  VHAGAGGTESQDWANMLLRMYTRWAEK 147
              AG G   S      LLR  T+  E+
Sbjct: 989  --AGQGLLRS---KAELLRSITKRKER 1010


>gi|255521638|ref|ZP_05388875.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes FSL
           J1-175]
          Length = 650

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EQISEELESM 650


>gi|282927350|ref|ZP_06334968.1| phage major capsid protein [Staphylococcus aureus A10102]
 gi|282590674|gb|EFB95750.1| phage major capsid protein [Staphylococcus aureus A10102]
          Length = 402

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  SDN + +K + E+ +   L + 
Sbjct: 71  VERQVQDIEE-KEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNE 118


>gi|114640663|ref|XP_001161980.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 2 [Pan troglodytes]
          Length = 1216

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|120597425|ref|YP_961999.1| peptidyl-tRNA hydrolase domain protein [Shewanella sp. W3-18-1]
 gi|146294434|ref|YP_001184858.1| peptidyl-tRNA hydrolase domain protein [Shewanella putrefaciens
           CN-32]
 gi|120557518|gb|ABM23445.1| Class I peptide chain release factor [Shewanella sp. W3-18-1]
 gi|145566124|gb|ABP77059.1| Class I peptide chain release factor [Shewanella putrefaciens
           CN-32]
 gi|319427787|gb|ADV55861.1| protein of unknown function YaeJ [Shewanella putrefaciens 200]
          Length = 143

 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 31/125 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E++      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 13  VELQENEIEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEFYQERLLNKADHRITKS 72

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             ++++CQ  RSQ  N+  A     A +  +   +++ I             G Q R   
Sbjct: 73  GKIIIKCQASRSQDANRQTALEQFIALVASVGEVQKKRIPTRATK-------GSQTRRLE 125

Query: 317 LQPYQ 321
            +  +
Sbjct: 126 TKKQK 130


>gi|126172721|ref|YP_001048870.1| peptidyl-tRNA hydrolase domain protein [Shewanella baltica OS155]
 gi|217974946|ref|YP_002359697.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           baltica OS223]
 gi|125995926|gb|ABN60001.1| Class I peptide chain release factor [Shewanella baltica OS155]
 gi|217500081|gb|ACK48274.1| Class I peptide chain release factor [Shewanella baltica OS223]
          Length = 143

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E++      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 13  VELQENEIEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEFYQERLLNKADHRITKS 72

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             ++++CQ  RSQ  N+  A     A +  +   +++ I             G Q R 
Sbjct: 73  GKIIIKCQASRSQDANRQTALEQFIALVASVGEVQKKRIPTRATK-------GSQTRR 123


>gi|108757726|ref|YP_631538.1| ABC transporter ATP-binding protein [Myxococcus xanthus DK 1622]
 gi|108461606|gb|ABF86791.1| ABC transporter, ATP-binding protein [Myxococcus xanthus DK 1622]
          Length = 657

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 13/85 (15%)

Query: 2   KLSRQLNCLGGLFDWD--NAVQRLSFLNT-------KTEDPHLWQNVIEAKMLMRERQ-- 50
           +  ++ + + G    +      R++ +         +  DP L+ +   AK LM   +  
Sbjct: 572 EARQRRSVVEGPLKKEIAKLEARIAEVEAGQKEREAQLADPALYNDFARAKPLMDTHRAS 631

Query: 51  --HLDNAISFIKEIQDRLCDNLILL 73
              L++  +  +  Q++L +    L
Sbjct: 632 KEELEDLYARWEAAQEKLAEASASL 656


>gi|194439906|ref|ZP_03071968.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1]
 gi|253774781|ref|YP_003037612.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160311|ref|YP_003043419.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B str.
           REL606]
 gi|300932150|ref|ZP_07147433.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1]
 gi|312970293|ref|ZP_07784475.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70]
 gi|194421152|gb|EDX37177.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1]
 gi|242376023|emb|CAQ30706.1| conserved protein [Escherichia coli BL21(DE3)]
 gi|253325825|gb|ACT30427.1| Class I peptide chain release factor [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972212|gb|ACT37883.1| hypothetical protein ECB_00190 [Escherichia coli B str. REL606]
 gi|253976421|gb|ACT42091.1| hypothetical protein ECD_00190 [Escherichia coli BL21(DE3)]
 gi|300460087|gb|EFK23580.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1]
 gi|310337791|gb|EFQ02902.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70]
 gi|323959953|gb|EGB55600.1| RF-1 domain-containing protein [Escherichia coli H489]
 gi|323970671|gb|EGB65927.1| RF-1 domain-containing protein [Escherichia coli TA007]
          Length = 140

 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|330808496|ref|YP_004352958.1| ABC transporter ATP-binding protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327376604|gb|AEA67954.1| Putative ABC transporter, ATP-binding component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 639

 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R+L  L G  D D   Q+++ +  +  D   +Q    A    +   HL+     +  
Sbjct: 574 KLQRELEALPG--DIDAKEQQIAAVEAEMADAGFYQRP--AAETAKVIAHLEQLQVELDA 629

Query: 62  IQDRLCDNLI 71
           + +R  +   
Sbjct: 630 LVERWAELDA 639


>gi|298693636|gb|ADI96858.1| SLT orf 37-like protein [Staphylococcus aureus subsp. aureus ED133]
          Length = 387

 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  S N + +K + E+ +   L + 
Sbjct: 56  VERQVKDIEE-KEKAKVKDTGEAYQSLSANEKMVKAKAEFYRHAILPNE 103


>gi|296114798|ref|ZP_06833448.1| peptidyl-tRNA hydrolase domain protein [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295978722|gb|EFG85450.1| peptidyl-tRNA hydrolase domain protein [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 140

 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 25/120 (20%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP----------------------- 256
           ++ IS+ D  +    ASG GGQ+VN   +A ++                           
Sbjct: 8   DLVISDDDIVVTYIHASGPGGQNVNKVATAAQLRFDMARCAALTSRIRARLHLLAGSRMT 67

Query: 257 --TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
               +V+  Q+ RSQ +N+  A   L   L +        IA     ++       + R 
Sbjct: 68  RDGTIVLTAQKFRSQTRNREDAIERLCDLLRQAAHVPTRRIATRPSRTQRRRRMDDKSRR 127


>gi|157147376|ref|YP_001454695.1| peptidyl-tRNA hydrolase domain protein [Citrobacter koseri ATCC
           BAA-895]
 gi|157084581|gb|ABV14259.1| hypothetical protein CKO_03174 [Citrobacter koseri ATCC BAA-895]
          Length = 140

 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 24/118 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +    ++++ Q+ RSQ  N+  A   L A + EL   ++   A     +  E     +
Sbjct: 65  SSDGVIIIKAQEYRSQELNREAAIARLVAVIKELTAVQKSRRATRPTRASKERRLSSK 122


>gi|87200084|ref|YP_497341.1| ABC transporter related [Novosphingobium aromaticivorans DSM 12444]
 gi|87135765|gb|ABD26507.1| ABC transporter related protein [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 598

 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 11/68 (16%)

Query: 15  DWDNAVQRLSFL-------NTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           D++    R+  L         +  DP L+  +  +   LM     L+      +  ++R 
Sbjct: 533 DYELLPTRIEELEAAIARGEAQLADPDLYARDPKKFDALM---AALEKVRGEKEAAEERW 589

Query: 67  CDNLILLE 74
            +   ++E
Sbjct: 590 LELAEMVE 597


>gi|15799873|ref|NP_285885.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           EDL933]
 gi|15829447|ref|NP_308220.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. Sakai]
 gi|168752175|ref|ZP_02777197.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4113]
 gi|168758716|ref|ZP_02783723.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4401]
 gi|168764945|ref|ZP_02789952.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4501]
 gi|168769960|ref|ZP_02794967.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4486]
 gi|168777700|ref|ZP_02802707.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4196]
 gi|168782085|ref|ZP_02807092.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4076]
 gi|168789302|ref|ZP_02814309.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC869]
 gi|168802463|ref|ZP_02827470.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC508]
 gi|195939888|ref|ZP_03085270.1| hypothetical protein EscherichcoliO157_26391 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807788|ref|ZP_03250125.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208814264|ref|ZP_03255593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208820681|ref|ZP_03261001.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209397979|ref|YP_002268800.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4115]
 gi|217326506|ref|ZP_03442590.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254791324|ref|YP_003076161.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|261226946|ref|ZP_05941227.1| hypothetical protein EscherichiacoliO157_20487 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255350|ref|ZP_05947883.1| hypothetical protein EscherichiacoliO157EcO_05914 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|12512922|gb|AAG54493.1|AE005195_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13359649|dbj|BAB33616.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767117|gb|EDU30961.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4196]
 gi|188013923|gb|EDU52045.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4113]
 gi|189000423|gb|EDU69409.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4076]
 gi|189354517|gb|EDU72936.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4401]
 gi|189361069|gb|EDU79488.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4486]
 gi|189365142|gb|EDU83558.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4501]
 gi|189371137|gb|EDU89553.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC869]
 gi|189375543|gb|EDU93959.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC508]
 gi|208727589|gb|EDZ77190.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4206]
 gi|208735541|gb|EDZ84228.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4045]
 gi|208740804|gb|EDZ88486.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4042]
 gi|209159379|gb|ACI36812.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC4115]
 gi|209748692|gb|ACI72653.1| hypothetical protein ECs0193 [Escherichia coli]
 gi|209748694|gb|ACI72654.1| hypothetical protein ECs0193 [Escherichia coli]
 gi|209748696|gb|ACI72655.1| hypothetical protein ECs0193 [Escherichia coli]
 gi|217322727|gb|EEC31151.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. TW14588]
 gi|254590724|gb|ACT70085.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|320190282|gb|EFW64932.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320639998|gb|EFX09583.1| hypothetical protein ECO5101_12093 [Escherichia coli O157:H7 str.
           G5101]
 gi|326339753|gb|EGD63561.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. 1044]
 gi|326345087|gb|EGD68830.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
           str. 1125]
          Length = 136

 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 32/139 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++           T      + R
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR-------RPTRPTRASKER 117

Query: 314 SYVLQPYQ-MVKDLRTNIE 331
               +  +  VK +R+  E
Sbjct: 118 RLASKAQKSSVKAMRSGRE 136


>gi|304410829|ref|ZP_07392446.1| Class I peptide chain release factor [Shewanella baltica OS183]
 gi|307305000|ref|ZP_07584750.1| Class I peptide chain release factor [Shewanella baltica BA175]
 gi|304350726|gb|EFM15127.1| Class I peptide chain release factor [Shewanella baltica OS183]
 gi|306912402|gb|EFN42826.1| Class I peptide chain release factor [Shewanella baltica BA175]
          Length = 143

 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E++      R+SGAGGQH+N   +A +++                     H  T  
Sbjct: 13  VELQENEIEWQFIRSSGAGGQHLNKVSTAAQLSFDIKSSSLPEFYQERLLNKADHRITKS 72

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             ++++CQ  RSQ  N+  A     A +  +   +++ I             G Q R 
Sbjct: 73  GKIIIKCQASRSQDANRQTALEQFIALVASVGEVQKKRIPTRATK-------GSQTRR 123


>gi|308809980|ref|XP_003082299.1| unnamed protein product [Ostreococcus tauri]
 gi|116060767|emb|CAL57245.1| unnamed protein product [Ostreococcus tauri]
          Length = 325

 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 48/156 (30%), Gaps = 11/156 (7%)

Query: 47  RERQHLDNAISFIKE-----IQDRLCDNLILLELALEEDD-CSILQETSDNLQRIKLEVE 100
           R    ++ A+  + E     ++ ++ D+L+  E  LE+++    L     ++  +  E E
Sbjct: 36  RREAEIERAVESLDEKGMVVLEKKIMDDLLEFERYLEDEEVLEALPRAVADITELTSEPE 95

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQD-----WANMLLRMYTRWAEKRKFKTEAL 155
               E++     D+++A      G     S       W   L+    R A +  +     
Sbjct: 96  RATIETMHRALGDADEASARGLDGLCSELSAIEVDPAWRGRLMAEVQRSAAENGWSAGNF 155

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
                  +             A      ++      
Sbjct: 156 AYGSTSFSTWSELFARCDALRARARTLNDEDFVVFG 191


>gi|323442647|gb|EGB00275.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus O46]
          Length = 402

 Score = 39.9 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  S N + +K + E+ +   L + 
Sbjct: 71  VERQVKDIEE-KEKAKVKDTGEAYQSLSANEKMVKAKAEFYRHAILPNE 118


>gi|146342892|ref|YP_001207940.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium
           sp. ORS278]
 gi|146195698|emb|CAL79725.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. ORS278]
          Length = 139

 Score = 39.9 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 25/122 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------- 258
           S ++ I E+D  I   RASG GGQ+VN   ++ ++    +                    
Sbjct: 5   SRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRITLPEDAAARLARLAGQRM 64

Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQI 312
                +V+Q ++ R+Q +NKA A   L   L E     K          SK     G++I
Sbjct: 65  TKTGVIVIQAERFRTQERNKADAIERLVTLLREAMVRPKVRRPTKPTFGSKQRRLEGKKI 124

Query: 313 RS 314
           RS
Sbjct: 125 RS 126


>gi|226304880|ref|YP_002764838.1| chaperone ClpB [Rhodococcus erythropolis PR4]
 gi|226183995|dbj|BAH32099.1| chaperone ClpB [Rhodococcus erythropolis PR4]
          Length = 850

 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 14/139 (10%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D +  RL  L  +  D     +  +   L    Q+   AI  ++ ++++L       E A
Sbjct: 436 DASKARLEKLRQELAD-----DREKLNQLSTRWQNEKQAIDSVRVLKEQLETLRGESERA 490

Query: 77  LEEDDCSILQETS-DNLQRIKLEVEYKQF--------ESLLSGEADSNDAYLEVHAGAGG 127
             + D     E     +  ++ E+E            + +L  E   +D    V A  G 
Sbjct: 491 ERDGDLGKAAELRYGRIPALEKELEEAAVASGAASDGDVMLKEEVGPDDVADVVAAWTGI 550

Query: 128 TESQDWANMLLRMYTRWAE 146
              +       ++    +E
Sbjct: 551 PAGRMMEGETEKLLRMESE 569


>gi|170036789|ref|XP_001846244.1| laminin alpha-1, 2 chain [Culex quinquefasciatus]
 gi|167879687|gb|EDS43070.1| laminin alpha-1, 2 chain [Culex quinquefasciatus]
          Length = 2296

 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 3    LSRQLNCL--GGLFDWDNAVQRLSFLNTKTE---DPHLWQNVI-EAKMLMRERQHLDNAI 56
            L+     +    L + +   Q+   +  + +   D  +  +   + + ++   + L+   
Sbjct: 970  LTESFTSMNRRKLAELERKFQQADEMVDEMQVFLDEDILADSAVKYEQIIDNYKQLEQNR 1029

Query: 57   SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
              +K + D L D +   +   EE    ++ +      ++K E +  Q
Sbjct: 1030 ENLKWLNDALEDTIKEFDRRFEELMQDVVPKAIARGHQLKEEADEYQ 1076


>gi|161504640|ref|YP_001571752.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865987|gb|ABX22610.1| hypothetical protein SARI_02761 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 140

 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           I I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   ISIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDILASGLPEYYKQRLLTASHHLISHD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A     +  E     +
Sbjct: 68  GVIIIKAQEYRSQELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSK 122


>gi|256080177|ref|XP_002576359.1| restin-like [Schistosoma mansoni]
 gi|238661625|emb|CAZ32596.1| restin-like [Schistosoma mansoni]
          Length = 1417

 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 14/137 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT-KTEDPHLWQNV----IEAKMLMRERQHLD---- 53
           L  Q+  L      +    R+  L   K +   L +N      +A  L RE   L     
Sbjct: 296 LHDQIEALK--MKREEDKTRIQELERIKIQFTQLEENRRLMREQAAELQREIAQLKTEKA 353

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFES-LLSG 110
                    +D + + +  +E+A  + +     L+  +  ++ +K +VE    E+ +L  
Sbjct: 354 ETKEAFDRYRDEVAEMVESVEMATLDKEMAEEKLESLTTEIELLKEQVEELTLENQILKE 413

Query: 111 EADSNDAYLEVHAGAGG 127
           E++       +    GG
Sbjct: 414 ESEEKGGATTLPGADGG 430


>gi|78486102|ref|YP_392027.1| ABC transporter related [Thiomicrospira crunogena XCL-2]
 gi|78364388|gb|ABB42353.1| ABC transporter ATP-binding protein homolog [Thiomicrospira
           crunogena XCL-2]
          Length = 642

 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCD 68
            +   Q L  LN +   P  +Q     + ++         L+ A    ++++  L D
Sbjct: 587 IETLEQELEKLNVQMSAPDFYQ-QENTQAVIDRLNTCESELEAAFERWEKLEALLND 642


>gi|157157087|ref|YP_001461361.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E24377A]
 gi|157159657|ref|YP_001456975.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|187732441|ref|YP_001878994.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella boydii
           CDC 3083-94]
 gi|188494154|ref|ZP_03001424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638]
 gi|191167036|ref|ZP_03028858.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|193063171|ref|ZP_03044262.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|193067745|ref|ZP_03048712.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019]
 gi|194428309|ref|ZP_03060851.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|194435008|ref|ZP_03067249.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|218552773|ref|YP_002385686.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           IAI1]
 gi|218693657|ref|YP_002401324.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 55989]
 gi|254037611|ref|ZP_04871688.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia sp.
           1_1_43]
 gi|256021624|ref|ZP_05435489.1| peptidyl-tRNA hydrolase domain protein [Shigella sp. D9]
 gi|260853402|ref|YP_003227293.1| hypothetical protein ECO26_0194 [Escherichia coli O26:H11 str.
           11368]
 gi|291281014|ref|YP_003497832.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293476849|ref|ZP_06665257.1| yaeJ protein [Escherichia coli B088]
 gi|300816232|ref|ZP_07096455.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1]
 gi|300824085|ref|ZP_07104205.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7]
 gi|300902011|ref|ZP_07120038.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1]
 gi|300920122|ref|ZP_07136575.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1]
 gi|300923016|ref|ZP_07139083.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1]
 gi|300938601|ref|ZP_07153333.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1]
 gi|301305328|ref|ZP_07211424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1]
 gi|301330006|ref|ZP_07222693.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1]
 gi|307311360|ref|ZP_07591002.1| Class I peptide chain release factor [Escherichia coli W]
 gi|309796369|ref|ZP_07690778.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7]
 gi|331666433|ref|ZP_08367314.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
 gi|331680771|ref|ZP_08381430.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
 gi|332282866|ref|ZP_08395279.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
 gi|157065337|gb|ABV04592.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|157079117|gb|ABV18825.1| putative peptidyl-tRNA hydrolase [Escherichia coli E24377A]
 gi|187429433|gb|ACD08707.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC
           3083-94]
 gi|188489353|gb|EDU64456.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638]
 gi|190902929|gb|EDV62656.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|192931079|gb|EDV83682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|192959157|gb|EDV89593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019]
 gi|194413684|gb|EDX29964.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|194416744|gb|EDX32872.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|218350389|emb|CAU96072.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218359541|emb|CAQ97079.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|226840717|gb|EEH72719.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia sp.
           1_1_43]
 gi|257752051|dbj|BAI23553.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|290760887|gb|ADD54848.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291321302|gb|EFE60744.1| yaeJ protein [Escherichia coli B088]
 gi|300405897|gb|EFJ89435.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1]
 gi|300412856|gb|EFJ96166.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1]
 gi|300420643|gb|EFK03954.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1]
 gi|300456447|gb|EFK19940.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1]
 gi|300523362|gb|EFK44431.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7]
 gi|300531439|gb|EFK52501.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1]
 gi|300839433|gb|EFK67193.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1]
 gi|300843960|gb|EFK71720.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1]
 gi|306908339|gb|EFN38837.1| Class I peptide chain release factor [Escherichia coli W]
 gi|308120073|gb|EFO57335.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7]
 gi|315059410|gb|ADT73737.1| conserved hypothetical protein [Escherichia coli W]
 gi|315254994|gb|EFU34962.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
 gi|320180900|gb|EFW55822.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii ATCC 9905]
 gi|320196931|gb|EFW71552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli WV_060327]
 gi|320200282|gb|EFW74868.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EC4100B]
 gi|320644768|gb|EFX13812.1| hypothetical protein ECO9389_12489 [Escherichia coli O157:H- str.
           493-89]
 gi|320652924|gb|EFX21162.1| hypothetical protein ECO2687_24853 [Escherichia coli O157:H- str. H
           2687]
 gi|320658312|gb|EFX26041.1| hypothetical protein ECO7815_24381 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320663622|gb|EFX30906.1| hypothetical protein ECO5905_24126 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668935|gb|EFX35730.1| hypothetical protein ECOSU61_24498 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323157971|gb|EFZ44073.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EPECa14]
 gi|323160241|gb|EFZ46199.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E128010]
 gi|323170984|gb|EFZ56633.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli LT-68]
 gi|323181700|gb|EFZ67114.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1357]
 gi|323380031|gb|ADX52299.1| Class I peptide chain release factor [Escherichia coli KO11]
 gi|323945669|gb|EGB41718.1| RF-1 domain-containing protein [Escherichia coli H120]
 gi|324118312|gb|EGC12207.1| RF-1 domain-containing protein [Escherichia coli E1167]
 gi|331066644|gb|EGI38521.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
 gi|331072234|gb|EGI43570.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
 gi|332097593|gb|EGJ02570.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae
           155-74]
 gi|332105218|gb|EGJ08564.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
          Length = 140

 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|72012906|ref|XP_786280.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115976395|ref|XP_001185479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 101

 Score = 39.9 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 11/89 (12%)

Query: 277 WNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRS-----YVL-QPYQMVKDLRTN 329
             ML+ ++Y   L  +     ++  S  +  G   +IR+     Y        + D R  
Sbjct: 1   MTMLQPRIYNRILADQTSSERSMRCSQVSRGGRSEKIRTTNPNLYNYNYQQDRITDHRRG 60

Query: 330 IEKTSPSDVLDGD--LDDFMKAT--LAIK 354
                    L G   LD+ + +   +  K
Sbjct: 61  RTVHGVPAYLLGSELLDEMVTSYERIVWK 89


>gi|209917382|ref|YP_002291466.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SE11]
 gi|209910641|dbj|BAG75715.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|324017841|gb|EGB87060.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 117-3]
          Length = 140

 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 24/99 (24%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG 258
            + I + +  I   RA GAGGQHVN T +A+ +                      H+ + 
Sbjct: 7   HVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISS 66

Query: 259 ---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
              +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 67  DGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|113968856|ref|YP_732649.1| peptidyl-tRNA hydrolase domain protein [Shewanella sp. MR-4]
 gi|114049006|ref|YP_739556.1| peptidyl-tRNA hydrolase domain protein [Shewanella sp. MR-7]
 gi|117918966|ref|YP_868158.1| peptidyl-tRNA hydrolase domain protein [Shewanella sp. ANA-3]
 gi|113883540|gb|ABI37592.1| Class I peptide chain release factor [Shewanella sp. MR-4]
 gi|113890448|gb|ABI44499.1| Class I peptide chain release factor [Shewanella sp. MR-7]
 gi|117611298|gb|ABK46752.1| Class I peptide chain release factor [Shewanella sp. ANA-3]
          Length = 137

 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 24/108 (22%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E++      R+SGAGGQ+VN   +A ++                      H  T  
Sbjct: 8   VELPENEIEWQFIRSSGAGGQNVNKVSTAAQLIFDIRNSSLPEFYQQRLLQKADHRITAS 67

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
             ++++CQ  RSQ  N+  A     A +  +    ++ I      S  
Sbjct: 68  GKIIIKCQASRSQEANRQTALEQFIALVASVAEVPKKRIPTRATKSSQ 115


>gi|115523440|ref|YP_780351.1| peptidyl-tRNA hydrolase domain protein [Rhodopseudomonas palustris
           BisA53]
 gi|115517387|gb|ABJ05371.1| Class I peptide chain release factor [Rhodopseudomonas palustris
           BisA53]
          Length = 141

 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 24/94 (25%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------------------- 258
           +I I E D  I   RASG GGQ+VN   +A ++    T                      
Sbjct: 9   DIVIDEDDIEIGFVRASGPGGQNVNKLSTAAQLRFDTTRLTMPDDMVVRLARLAGQRMTK 68

Query: 259 ---VVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
              +V+  Q+ R+Q +N+A A + L   L E  +
Sbjct: 69  DGVIVIHAQRFRTQERNRADAIDRLVELLKEAAI 102


>gi|119776325|ref|YP_929065.1| peptidyl-tRNA hydrolase domain protein [Shewanella amazonensis
           SB2B]
 gi|119768825|gb|ABM01396.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 137

 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 24/109 (22%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258
           +++ + +      R+SGAGGQ+VN   +  ++                      H  T  
Sbjct: 8   VQLQDQEIEWQFIRSSGAGGQNVNKVSTCAQLIFDIRASSLPEFYKEKLLARSDHRITQS 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
             ++++CQ+ RSQ  N+  A     A +  +   +++ I      +  +
Sbjct: 68  GKIIIKCQESRSQEANRETALAQFIALVQSVNQVQKKRIPTKATRASQK 116


>gi|154492953|ref|ZP_02032579.1| hypothetical protein PARMER_02595 [Parabacteroides merdae ATCC
           43184]
 gi|154087258|gb|EDN86303.1| hypothetical protein PARMER_02595 [Parabacteroides merdae ATCC
           43184]
          Length = 562

 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 2/100 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE--IQDRLCDNLILLELAL 77
           ++    +N K  DP + ++  +   L+  +  L + I       +  RL   +  L    
Sbjct: 104 LKEYEEVNEKFGDPEILEDPDKMDALINRQAELQDKIDATDAWNLDSRLERAMDALRCPP 163

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           E+     L         +   +  +    LL    +  DA
Sbjct: 164 EDQVVDTLSGGERRRVALCRLLLQQPDILLLDEPTNHLDA 203


>gi|300715418|ref|YP_003740221.1| conserved uncharacterized protein YaeJ [Erwinia billingiae Eb661]
 gi|299061254|emb|CAX58363.1| conserved uncharacterized protein YaeJ [Erwinia billingiae Eb661]
          Length = 139

 Score = 39.9 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 24/103 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THI- 255
           S  + I +S+  +   RA G GGQ+VN + +A+ +                      H+ 
Sbjct: 5   SRNVTIPDSELELTAIRAQGNGGQNVNKSSTAIHLRFDIRASSLPGFYKERLMAVSHHLI 64

Query: 256 -PTGVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
            P GVV+ + Q+ RSQ  N+  A   L   + EL + ++   A
Sbjct: 65  TPEGVVIIKAQEYRSQEMNREAALKRLENLIQELTVVEKTRRA 107


>gi|317405183|gb|EFV85524.1| ABC transporter ATP-binding protein [Achromobacter xylosoxidans
           C54]
          Length = 644

 Score = 39.9 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER----QHLDNAI 56
           L  +L  +    + +    +L  L+    DP L+ +   A  + +M E     + ++   
Sbjct: 569 LEAKLAKVEA--EMEKLRAKLQALDAVIADPDLYSDARRAERQKVMAEHGEHGKRMETLE 626

Query: 57  SFIKEIQDRLCDNLI 71
               E+Q  L +   
Sbjct: 627 EQWLELQGSLEEIEQ 641


>gi|296216340|ref|XP_002754540.1| PREDICTED: pleckstrin homology-like domain family B member 1
           isoform 4 [Callithrix jacchus]
          Length = 1319

 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERSLL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEELVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|256080175|ref|XP_002576358.1| restin-like [Schistosoma mansoni]
 gi|238661624|emb|CAZ32595.1| restin-like [Schistosoma mansoni]
          Length = 1409

 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 14/137 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT-KTEDPHLWQNV----IEAKMLMRERQHLD---- 53
           L  Q+  L      +    R+  L   K +   L +N      +A  L RE   L     
Sbjct: 288 LHDQIEALK--MKREEDKTRIQELERIKIQFTQLEENRRLMREQAAELQREIAQLKTEKA 345

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFES-LLSG 110
                    +D + + +  +E+A  + +     L+  +  ++ +K +VE    E+ +L  
Sbjct: 346 ETKEAFDRYRDEVAEMVESVEMATLDKEMAEEKLESLTTEIELLKEQVEELTLENQILKE 405

Query: 111 EADSNDAYLEVHAGAGG 127
           E++       +    GG
Sbjct: 406 ESEEKGGATTLPGADGG 422


>gi|114640671|ref|XP_001162736.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 15 [Pan troglodytes]
 gi|114640673|ref|XP_001162693.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 14 [Pan troglodytes]
          Length = 1199

 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 598 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 646

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 647 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 693


>gi|291222160|ref|XP_002731086.1| PREDICTED: laminin B2-like [Saccoglossus kowalevskii]
          Length = 1629

 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 49/142 (34%)

Query: 13   LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM-LMR------------------------ 47
            + D D+  Q L  L+ + +      +   A+  LM+                        
Sbjct: 1484 MMDVDDTEQELDELDKQAD-----NDAALAQEALMKANEARRNAQEASDTVQSALSDVND 1538

Query: 48   ---ERQHLDNA-ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
               E  HL+   +  + E++ +L D    L+ A          +  + L+ +K   + ++
Sbjct: 1539 LLNELAHLEPIDLERLNELEGQLADTNDTLQDA----------DLDNKLEDLKAARDQQK 1588

Query: 104  FESLLSGEADSNDAYLEVHAGA 125
               +     D  DA +++ A  
Sbjct: 1589 QWIM-----DYEDALVDLRAAV 1605


>gi|148992707|ref|ZP_01822350.1| pneumococcal surface protein A [Streptococcus pneumoniae SP9-BS68]
 gi|147928433|gb|EDK79448.1| pneumococcal surface protein A [Streptococcus pneumoniae SP9-BS68]
          Length = 746

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 26/128 (20%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKT--EDPHLWQNVIEAK--------MLMRERQH 51
           +L ++ + L       +  + +S L       DP    +    +         L +++  
Sbjct: 286 ELDKKADELQN--KVADLEKEISNLEILLGGADPE--DDTAALQNKLAAKQAELAKKQTE 341

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL 108
           L+  +  +        +     EL  E ++  +     E  + +  ++ E+   +    L
Sbjct: 342 LEKLLDSLD------PEGKTQDELDKEAEEAELDKKADELQNKVADLEKEISNLEI---L 392

Query: 109 SGEADSND 116
            G ADS D
Sbjct: 393 LGGADSED 400


>gi|240143575|ref|ZP_04742176.1| ABC transporter, ATP-binding protein [Roseburia intestinalis L1-82]
 gi|257204471|gb|EEV02756.1| ABC transporter, ATP-binding protein [Roseburia intestinalis L1-82]
          Length = 632

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           ++++ L  +    KE +  + D++  LEL LE+ D  +    ++  +  +L  E +  E 
Sbjct: 550 KQKKKLKFSYKEQKEYET-IEDDIAALELKLEDLDNEMAANATNAAKLRELVEEKENAEK 608

Query: 107 LLSGEADSNDAYLEVHAGAGGTES 130
           +L  + D  +   E+ A   G +S
Sbjct: 609 MLEEKMDRWEYLEELAAKIAGQQS 632


>gi|311747695|ref|ZP_07721480.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
 gi|126575683|gb|EAZ79993.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
          Length = 640

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL   L+ +      +   Q  S L TK  DP L+ +  EAK    + Q L   ++ + +
Sbjct: 566 KLEESLSKVEAS--IEKLEQSKSQLETKMADPSLYSDDEEAKKAQLKHQELHKQLNEMND 623

Query: 62  IQDRLCDNLILLEL 75
             + L D + +++ 
Sbjct: 624 KWEALVDQISMIQE 637


>gi|170021455|ref|YP_001726409.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli ATCC 8739]
 gi|169756383|gb|ACA79082.1| Class I peptide chain release factor [Escherichia coli ATCC 8739]
          Length = 140

 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|82542790|ref|YP_406737.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii Sb227]
 gi|81244201|gb|ABB64909.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|320186614|gb|EFW61339.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri CDC
           796-83]
 gi|332098782|gb|EGJ03742.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 3594-74]
          Length = 140

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|315283123|ref|ZP_07871384.1| ABC transporter, ATP-binding protein [Listeria marthii FSL S4-120]
 gi|313613225|gb|EFR87108.1| ABC transporter, ATP-binding protein [Listeria marthii FSL S4-120]
          Length = 650

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +   P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEQAM--EETEEKIAELELQLTKPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 ETISEELESM 650


>gi|291539939|emb|CBL13050.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Roseburia intestinalis XB6B4]
          Length = 632

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           ++++ L  +    KE +  + D++  LEL LE+ D  +    ++  +  +L  E +  E 
Sbjct: 550 KQKKKLKFSYKEQKEYET-IEDDIAALELKLEDLDNEMAANATNAAKLRELVEEKENAEK 608

Query: 107 LLSGEADSNDAYLEVHAGAGGTES 130
           +L  + D  +   E+ A   G +S
Sbjct: 609 MLEEKMDRWEYLEELAAKIAGQQS 632


>gi|258571870|ref|XP_002544738.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237905008|gb|EEP79409.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 582

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 17/129 (13%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R +  +  +       Q +S L  K                 +++   + A+   K  
Sbjct: 119 LQRSICTIWQV-----KQQEISELEEKIS------------EFEKQKSENEKAVKAAKRE 161

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L      LE A  E+   + +E+   LQ  + E++    + +   +AD   AY  + 
Sbjct: 162 RVELEKQKKDLERARGEEKSRMEEESRKKLQAKEKELDKASQKKIEKAKADIKAAYDTLK 221

Query: 123 AGAGGTESQ 131
           A     E Q
Sbjct: 222 ADKEMLEKQ 230


>gi|153002359|ref|YP_001368040.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           baltica OS185]
 gi|151366977|gb|ABS09977.1| Class I peptide chain release factor [Shewanella baltica OS185]
          Length = 143

 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E +      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 13  VELQEKEIEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEYYQERLLNKADHRITKS 72

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             ++++CQ  RSQ  N+  A     A +  +   +++ I             G Q R 
Sbjct: 73  GKIIIKCQASRSQDANRQTALEQFIALVASVGEVQKKRIPTRATK-------GSQTRR 123


>gi|332075798|gb|EGI86265.1| choline binding protein A [Streptococcus pneumoniae GA17570]
          Length = 741

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 26/128 (20%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKT--EDPHLWQNVIEAK--------MLMRERQH 51
           +L ++ + L       +  + +S L       DP    +    +         L +++  
Sbjct: 281 ELDKKADELQN--KVADLEKEISNLEILLGGADPE--DDTAALQNKLAAKQAELAKKQTE 336

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL 108
           L+  +  +        +     EL  E ++  +     E  + +  ++ E+   +    L
Sbjct: 337 LEKLLDSLD------PEGKTQDELDKEAEEAELDKKADELQNKVADLEKEISNLEI---L 387

Query: 109 SGEADSND 116
            G ADS D
Sbjct: 388 LGGADSED 395


>gi|332160616|ref|YP_004297193.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325664846|gb|ADZ41490.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860910|emb|CBX71190.1| uncharacterized protein yaeJ [Yersinia enterocolitica W22703]
          Length = 138

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + + +S+  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SNNVSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLSLNSHLM 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           T    ++++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR
Sbjct: 65  TAEGVIIIKAQEYRSQDMNREAALVRLVALIRQSMVVEKTRRATKPTK-------GSKIR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|296216336|ref|XP_002754538.1| PREDICTED: pleckstrin homology-like domain family B member 1
           isoform 2 [Callithrix jacchus]
 gi|296216338|ref|XP_002754539.1| PREDICTED: pleckstrin homology-like domain family B member 1
           isoform 3 [Callithrix jacchus]
          Length = 1377

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERSLL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEELVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|225378603|ref|ZP_03755824.1| hypothetical protein ROSEINA2194_04271 [Roseburia inulinivorans DSM
           16841]
 gi|225209440|gb|EEG91794.1| hypothetical protein ROSEINA2194_04271 [Roseburia inulinivorans DSM
           16841]
          Length = 695

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 11/87 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D+A   ++    K  D         A+  + +  + L +A + IKE + +L D     +
Sbjct: 53  LDSAKAEIAENEQKLND---------AQSEINKNEKKLADAKNEIKENEQKLTDGQAEYD 103

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEY 101
              EE+   + ++   ++ + K ++  
Sbjct: 104 AEYEENHQKL-EDAKADIIQAKADLAD 129


>gi|254992571|ref|ZP_05274761.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes FSL
           J2-064]
          Length = 650

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EQISEELESM 650


>gi|46908309|ref|YP_014698.1| ABC transporter ATP-binding protein [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46881580|gb|AAT04875.1| ABC transporter, ATP-binding protein [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 650

 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EQISEELESM 650


>gi|226320895|ref|ZP_03796446.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233667|gb|EEH32397.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 81

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 33/76 (43%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           ++A  ++  +  K +D +L ++  +   +++E  +L+   +   E +  L        +
Sbjct: 6  LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 76 ALEEDDCSILQETSDN 91
            +ED   + +  + N
Sbjct: 66 LEKEDQQEMKELINKN 81


>gi|254853990|ref|ZP_05243338.1| ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|300765509|ref|ZP_07075490.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL
           N1-017]
 gi|258607379|gb|EEW19987.1| ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|300513820|gb|EFK40886.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL
           N1-017]
          Length = 650

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EQISEELESM 650



 Score = 36.1 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 7   LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           L+ +  +FD        L  +  +  +P L+ +  + + LM +   L 
Sbjct: 84  LDEMLSVFDSLRRMEADLRKMELRLGEPELYNDPEKYQALMTDYDTLQ 131


>gi|85711375|ref|ZP_01042434.1| hypothetical protein OS145_01612 [Idiomarina baltica OS145]
 gi|85694876|gb|EAQ32815.1| hypothetical protein OS145_01612 [Idiomarina baltica OS145]
          Length = 136

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PT 257
           +EI + +      R+SGAGGQ+VN   +A ++                           +
Sbjct: 8   VEIPDQEIEWQFIRSSGAGGQNVNKVATAAQLIFDIQSSSLPDFYKQRLLKLSDHRITQS 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G V ++ Q+ RSQ +N+  A   L   +  +   +++ IA
Sbjct: 68  GKVIIKAQETRSQARNRELALEQLTGLIRSVSYVQKKRIA 107


>gi|47091741|ref|ZP_00229536.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           4b H7858]
 gi|226224679|ref|YP_002758786.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes
           Clip81459]
 gi|47019752|gb|EAL10490.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           4b H7858]
 gi|225877141|emb|CAS05853.1| Putative ABC transporter (ATP-binding protein) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 650

 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EQISEELESM 650


>gi|260829675|ref|XP_002609787.1| hypothetical protein BRAFLDRAFT_122104 [Branchiostoma floridae]
 gi|229295149|gb|EEN65797.1| hypothetical protein BRAFLDRAFT_122104 [Branchiostoma floridae]
          Length = 1128

 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 18/93 (19%)

Query: 37  QNV---IEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSILQETSD 90
            +     + + L +  QHL       ++++    ++       E   EEDD     E   
Sbjct: 85  NDPHATAKFQELGKAYQHL-------RDLKKEENEDFQGEEAWEYFDEEDDPESFAEF-- 135

Query: 91  NLQRIKLEVEYK---QFESLLSGEADSNDAYLE 120
            ++++  E+E +   + E L   +     A + 
Sbjct: 136 EIKKLAEEIEKRNAEELERLKRQKEKEKSASMR 168


>gi|168489392|ref|ZP_02713591.1| pneumococcal surface protein A [Streptococcus pneumoniae SP195]
 gi|183572047|gb|EDT92575.1| pneumococcal surface protein A [Streptococcus pneumoniae SP195]
          Length = 746

 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 26/128 (20%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKT--EDPHLWQNVIEAK--------MLMRERQH 51
           +L ++ + L       +  + +S L       DP    +    +         L +++  
Sbjct: 286 ELDKKADELQN--KVADLEKEISNLEILLGGADPE--DDTAALQNKLAAKQAELAKKQTE 341

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL 108
           L+  +  +        +     EL  E ++  +     E  + +  ++ E+   +    L
Sbjct: 342 LEKLLDSLD------PEGKTQDELDKEAEEAELDKKADELQNKVADLEKEISNLEI---L 392

Query: 109 SGEADSND 116
            G ADS D
Sbjct: 393 LGGADSED 400


>gi|308484105|ref|XP_003104253.1| hypothetical protein CRE_24901 [Caenorhabditis remanei]
 gi|308258222|gb|EFP02175.1| hypothetical protein CRE_24901 [Caenorhabditis remanei]
          Length = 410

 Score = 39.6 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 8/65 (12%), Positives = 24/65 (36%), Gaps = 8/65 (12%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKT----EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           N   G+FD    ++++  L  +     E   +       +   + R+ +   +  ++ + 
Sbjct: 343 NEFPGVFDLLEMLEKIKELENELLRMEESEEVID----WREQNKRRREIPLEVEKLRRLM 398

Query: 64  DRLCD 68
           +   D
Sbjct: 399 EEKDD 403


>gi|326445174|ref|ZP_08219908.1| ATP/GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 759

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 17/88 (19%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAK-----------MLMRERQHLDNAISFIKEIQDRLCD 68
           + R   L  +  D        EA+            L+R +  L       +E++ RL +
Sbjct: 97  LSRAEELEEQLADAD-----REAQRITARQAALEEALLRRQDRLKELRGECRELKLRLAE 151

Query: 69  NLILL-ELALEEDDCSILQETSDNLQRI 95
             +L  E A  E + S LQE   +L+  
Sbjct: 152 VEVLRGEHAQLEQERSALQEEVVHLKEA 179


>gi|318606906|emb|CBY28404.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 138

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + + +S+  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SNNVSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLM 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           T    ++++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR
Sbjct: 65  TAEGVIIIKAQEYRSQDMNREAALVRLVALIRQSMVVEKTRRATKPTK-------GSKIR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|292492579|ref|YP_003528018.1| ABC transporter [Nitrosococcus halophilus Nc4]
 gi|291581174|gb|ADE15631.1| ABC transporter related protein [Nitrosococcus halophilus Nc4]
          Length = 635

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 9/76 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++L+ + G    +      S L+ +   P L+Q+  +     +E   L   +     +
Sbjct: 560 LQKKLDEIEGTL--EKLQAEKSTLDQELAHPDLYQDPQQ-----KEH--LKALLMKQARL 610

Query: 63  QDRLCDNLILLELALE 78
           +  L +      +A E
Sbjct: 611 EQTLIETEEAWLMASE 626


>gi|210633119|ref|ZP_03297686.1| hypothetical protein COLSTE_01595 [Collinsella stercoris DSM 13279]
 gi|210159273|gb|EEA90244.1| hypothetical protein COLSTE_01595 [Collinsella stercoris DSM 13279]
          Length = 673

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 9/75 (12%), Positives = 20/75 (26%), Gaps = 9/75 (12%)

Query: 3   LSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI- 56
           L+R+L              +    R   L        L+ +  +    + E   L   + 
Sbjct: 592 LNRRLKGTKDRLKKVEAALEVKRARYDELMALMASEELYADQDKFNEALAEYNALKQELP 651

Query: 57  ---SFIKEIQDRLCD 68
                  E+   + +
Sbjct: 652 GLEDEWLELSTTIEE 666


>gi|254785803|ref|YP_003073232.1| ABC transporter [Teredinibacter turnerae T7901]
 gi|237684364|gb|ACR11628.1| ABC transporter [Teredinibacter turnerae T7901]
          Length = 632

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEI 62
           ++++  L          ++L  + ++  DP ++  +  E   L++ +  L   +  I+  
Sbjct: 557 NKRIKQLEQ--KLSKTTEKLEKVESRLADPDIYDGDGAELSELLKTQATLKQEVDDIELA 614

Query: 63  QDRLCDNLILLE 74
                +    LE
Sbjct: 615 WMEESEAKEALE 626


>gi|254831686|ref|ZP_05236341.1| hypothetical protein Lmon1_10043 [Listeria monocytogenes 10403S]
          Length = 650

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFI 59
            R+L  +      +   ++++ +  +  +P ++Q+  +A  + +E   +    +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAEIELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|73662141|ref|YP_300922.1| ABC transporter ATPase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494656|dbj|BAE17977.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 642

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQH--LDNAIS 57
           ++ RQ+       D +    +++ +N +   P ++    +A    + ++     L+  +S
Sbjct: 575 QIERQIETCEA--DIEQFEAQINEINEQLTLPDVYSTPEKANDLAISKQHTEQKLEQVMS 632

Query: 58  FIKEIQDRL 66
              E+Q++L
Sbjct: 633 EWAELQEKL 641


>gi|333011033|gb|EGK30452.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-272]
 gi|333021828|gb|EGK41077.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-227]
          Length = 140

 Score = 39.6 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   R  GAGGQ+VN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRVQGAGGQNVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTKEQKAR 105


>gi|307946753|ref|ZP_07662088.1| GCN20-type ATP-binding cassette protein GCN3 [Roseibium sp.
           TrichSKD4]
 gi|307770417|gb|EFO29643.1| GCN20-type ATP-binding cassette protein GCN3 [Roseibium sp.
           TrichSKD4]
          Length = 637

 Score = 39.6 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 20/57 (35%), Gaps = 5/57 (8%)

Query: 18  NAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDN 69
              +++  L+    DP  +Q +   A    +ER + +  +        E+     + 
Sbjct: 580 RLQEKIEKLDEALADPAFFQTDPDRAAKFAKERAYCEKKLVKTEEEWLELSAEFEEA 636


>gi|260866341|ref|YP_003232743.1| hypothetical protein ECO111_0193 [Escherichia coli O111:H- str.
           11128]
 gi|257762697|dbj|BAI34192.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|323176507|gb|EFZ62099.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1180]
          Length = 140

 Score = 39.6 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLSEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|260655863|ref|ZP_05861332.1| ATP-dependent chaperone protein ClpB [Jonquetella anthropi E3_33
           E1]
 gi|260629479|gb|EEX47673.1| ATP-dependent chaperone protein ClpB [Jonquetella anthropi E3_33
           E1]
          Length = 868

 Score = 39.6 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D + +RL+ L  +  D        +   L    +   + ++ ++ +++R+    + LE A
Sbjct: 438 DASARRLAELQKELADA-----REQQNELTARYESEKSRLTDVQALRERIEAAKVELEKA 492

Query: 77  LEEDDCSILQETS-DNLQRIKLEVEYKQ 103
               D   + E     L ++  E+  K+
Sbjct: 493 ERAYDLERMAELRHGELPKLTEELAKKE 520


>gi|164659846|ref|XP_001731047.1| hypothetical protein MGL_2046 [Malassezia globosa CBS 7966]
 gi|159104945|gb|EDP43833.1| hypothetical protein MGL_2046 [Malassezia globosa CBS 7966]
          Length = 1010

 Score = 39.6 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 11/98 (11%)

Query: 20  VQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIK----EIQDRLCDNL 70
             RL  L T+          L  +      L +        +  ++    E++D + +  
Sbjct: 259 KARLEELQTECSAHVARIAALESDASRLSELTQAYDKAKARVRELEGACDELKDNMQELT 318

Query: 71  ILLELA-LEEDDCSILQET-SDNLQRIKLEVEYKQFES 106
             LE+A L+ +      E     L+  +  VE  + E 
Sbjct: 319 DSLEMATLDREMAEERSEALQQELKTAQETVEELRLER 356


>gi|310798513|gb|EFQ33406.1| DENN domain-containing protein [Glomerella graminicola M1.001]
          Length = 908

 Score = 39.6 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 66/189 (34%), Gaps = 37/189 (19%)

Query: 1   MKLSRQLNCLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNV-----IEAKMLMRERQHLD 53
           ++  +    L G  D   +   +R ++LN + E    W+         A+ L +E Q L 
Sbjct: 512 LEAWQDFINLKGRMDTELNKVTKRNNYLNEELES---WKQQFLKFQAFAEQLTKETQDLK 568

Query: 54  NAISFIKE--------IQDRLCDNLIL-LELALEE---DDC--------SILQETSDNLQ 93
           + I   K         I  +  DN  L + L   E   DD          I +E     +
Sbjct: 569 SKIETHKRENRRLASLIDQQKDDNGRLNVRLGATEKQRDDALEALVLQQEIAEELERERK 628

Query: 94  RIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES--QDWANMLLRMY--TRWAEK 147
           R K E+   Q  ++  L    ++    L + +  GG     +     L +     R  E+
Sbjct: 629 RNKKELAALQHTNMTILRQRDEARRVVLHLRSLIGGQSHHMEHLVQSLTKPDDLEREIEE 688

Query: 148 RKFKTEALE 156
             F+ E  E
Sbjct: 689 -GFEPEVGE 696


>gi|218191159|gb|EEC73586.1| hypothetical protein OsI_08052 [Oryza sativa Indica Group]
          Length = 1667

 Score = 39.6 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  N   RL    T+      W+   E K + +E+  L   +  ++  + R+ D     +
Sbjct: 1437 DKKNLHDRLHEAETQLSQFKAWK-REELKKITKEKNALAERLKGVEASRKRVDD--EFKQ 1493

Query: 75   LALEEDD-CSILQETSDNLQRIKLEVEYKQFES 106
               E      I +     ++R+   V   + E 
Sbjct: 1494 FVAEAQTREEIRKSLEGEVRRLTQTVGQTEGEK 1526


>gi|325104509|ref|YP_004274163.1| ABC transporter related protein [Pedobacter saltans DSM 12145]
 gi|324973357|gb|ADY52341.1| ABC transporter related protein [Pedobacter saltans DSM 12145]
          Length = 559

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 1/99 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++    +N K   P ++++      LM  +  L + I  +   +        +  L  
Sbjct: 101 DILKEYEEINEKFGLPEVYEDADAMDKLMTRQGELQDKIDAVNAWELDSKLERAMDALRC 160

Query: 78  EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSN 115
            E D  I   +    +R+ L  +  +Q + LL  E  ++
Sbjct: 161 PEPDTKIATLSGGERRRVALCRLLIQQPDVLLLDEPTNH 199


>gi|291614774|ref|YP_003524931.1| class I peptide chain release factor [Sideroxydans lithotrophicus
           ES-1]
 gi|291584886|gb|ADE12544.1| Class I peptide chain release factor [Sideroxydans lithotrophicus
           ES-1]
          Length = 137

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 24/118 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITH------IPTGV--------------- 259
           + I E +  +   RA GAGGQ+VN   SAV +        +P                  
Sbjct: 8   VVIPEREIELTAVRAQGAGGQNVNKVSSAVHLRFDIAASSLPPEFKERLLQLSDQRITRD 67

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
              V++ Q+ R+Q +N+ +A   L++ L  + ++ +  +A     S  +     + R 
Sbjct: 68  GVVVIKAQEFRNQEQNRNEALRRLKSLLMSIAVKPKPRVATKPSRSSQKKRLESKTRR 125


>gi|82775583|ref|YP_401930.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae Sd197]
 gi|309787129|ref|ZP_07681741.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617]
 gi|81239731|gb|ABB60441.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308924707|gb|EFP70202.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617]
          Length = 140

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA G GGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGVGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASYHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|332095133|gb|EGJ00165.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 5216-82]
          Length = 140

 Score = 39.6 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|317127994|ref|YP_004094276.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
 gi|315472942|gb|ADU29545.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
          Length = 1665

 Score = 39.6 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 15/82 (18%)

Query: 3    LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
            L  +++ L    D      R++ L  +               L  +   L++ ++   E+
Sbjct: 1531 LQDRISELEDSSDIVELELRVAELEGQL------------VALQAQYSDLEDFVA---EL 1575

Query: 63   QDRLCDNLILLELALEEDDCSI 84
            + R+ D    LE   E+   S 
Sbjct: 1576 EQRISDLRSELEELKEDISEST 1597


>gi|238751427|ref|ZP_04612919.1| hypothetical protein yrohd0001_19870 [Yersinia rohdei ATCC 43380]
 gi|238710294|gb|EEQ02520.1| hypothetical protein yrohd0001_19870 [Yersinia rohdei ATCC 43380]
          Length = 131

 Score = 39.6 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 31/116 (26%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG--- 258
           + +S+  +   R+ GAGGQHVN T +A+ +                      H+ T    
Sbjct: 3   LPDSEIELTAIRSQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAEGV 62

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           ++++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR 
Sbjct: 63  IIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTK-------GSKIRR 111


>gi|115379294|ref|ZP_01466406.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310821039|ref|YP_003953397.1| ABC transporter ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363704|gb|EAU62827.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394111|gb|ADO71570.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 656

 Score = 39.6 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 13/85 (15%)

Query: 2   KLSRQLNCLGGLFDWD--NAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRERQ-- 50
           +  ++ + + G    +     +R+S L         +  DP L+ +   AK LM   +  
Sbjct: 571 EARQRRSTVEGPLKKEIARIEERISKLETAQKEREAQLADPDLYNDFARAKPLMDTHRAG 630

Query: 51  --HLDNAISFIKEIQDRLCDNLILL 73
              L++  +  +  Q++L +    L
Sbjct: 631 KEELESLYAAWEAAQEKLAEATASL 655


>gi|123451408|ref|XP_001313857.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121895754|gb|EAY00928.1| Leucine Rich Repeat family protein [Trichomonas vaginalis G3]
          Length = 266

 Score = 39.6 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 35/88 (39%), Gaps = 8/88 (9%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D +   +RL+ L      P+   ++        +   L+  ++ +        +   ++
Sbjct: 161 LDRETIKERLTVLEATMIAPNFATDLKF------KLNSLEKQLNLLIAPPAPKNEMGEII 214

Query: 74  ELA--LEEDDCSILQETSDNLQRIKLEV 99
            L    +E D ++L    D +++IK ++
Sbjct: 215 SLITPFKEGDEALLDSLLDEVRQIKRQL 242


>gi|116333264|ref|YP_794791.1| ABC transporter ATPase [Lactobacillus brevis ATCC 367]
 gi|116098611|gb|ABJ63760.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus brevis ATCC 367]
          Length = 650

 Score = 39.6 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 5/37 (13%), Positives = 12/37 (32%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
               R+  L  +  DP +  +  + + +      L  
Sbjct: 96  AMENRIHDLEQQMSDPTVIADTEQFQQISAAYDQLQQ 132


>gi|92118633|ref|YP_578362.1| peptidyl-tRNA hydrolase domain protein [Nitrobacter hamburgensis
           X14]
 gi|91801527|gb|ABE63902.1| Class I peptide chain release factor [Nitrobacter hamburgensis X14]
          Length = 139

 Score = 39.6 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 31/119 (26%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAV-------RITHIPT--------------- 257
           +I I E+D  I   RASG GGQ+VN   +A        R+T  P                
Sbjct: 7   DIVIDENDIEISFIRASGPGGQNVNKLSTAAQLRFDTRRLTLAPDVAVRLARLAGQRLTK 66

Query: 258 --GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
              +V+  Q+ R+Q +N+A A + L   L       RE          T+  +G + R 
Sbjct: 67  DGVIVIHAQRFRTQERNRADATDRLIELL-------REAAIRPTPRRATKPTFGSKQRR 118


>gi|70983422|ref|XP_747238.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|66844864|gb|EAL85200.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|159123756|gb|EDP48875.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
          Length = 1142

 Score = 39.6 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 10/100 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL   +N L    +  N  ++   +     +   +      + L++ +  L+  ++    
Sbjct: 554 KLKNTINELR--MELGNLEEKRKDIEESLAEAEKFN-----QELLQTKSELEGQVAT--- 603

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           ++  + +     E  LE       +  ++  Q +    E 
Sbjct: 604 LKTNIKEAQEAHEQELERQKEERAEALANQKQELTELFEE 643


>gi|329735442|gb|EGG71731.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis
           VCU028]
          Length = 644

 Score = 39.6 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 5/55 (9%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS----FIKEIQDRL 66
            +    ++S +  +   P ++ + ++A     ++  ++  +       +++Q++L
Sbjct: 590 IEELEAQISHIEEQLTQPEVFNDPLKASKFANQKSDIEQKLEQIMLEWEKLQEKL 644


>gi|269203616|ref|YP_003282885.1| phage major capsid protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|262075906|gb|ACY11879.1| phage major capsid protein [Staphylococcus aureus subsp. aureus
           ED98]
          Length = 387

 Score = 39.6 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +DN + +K + E+ +   L + 
Sbjct: 56  VERQVQDIEE-KEKAKVKDTGEAYQSLNDNEKMVKAKAEFYRHAILPNE 103


>gi|320353117|ref|YP_004194456.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
 gi|320121619|gb|ADW17165.1| ABC transporter related protein [Desulfobulbus propionicus DSM
           2032]
          Length = 611

 Score = 39.6 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDR 65
            A  RL  L      P +  N  +      E+Q L    +       E++ R
Sbjct: 557 AAEARLGELEALMASPEVMANPAQLHRYWEEQQELQTKTEQLYDRWDELEQR 608


>gi|332203289|gb|EGJ17356.1| cell wall binding repeat family protein [Streptococcus pneumoniae
           GA47368]
          Length = 424

 Score = 39.6 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 24/109 (22%)

Query: 21  QRLSFLNTKT--EDPHLWQNVIEAK--------MLMRERQHLDNAISFIKEIQDRLCDNL 70
           + +S L       DP    +    +         L +++  L+  +  +        +  
Sbjct: 1   KEISNLEILLGGADPE--DDTAALQNKLAAKQAELAKKQTELEKLLDSLD------PEGK 52

Query: 71  ILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
              EL  E ++  +     E  + +  ++ E+   +    L G ADS D
Sbjct: 53  TQDELDKEAEEAELDKKADELQNKVADLEKEISNLEI---LLGGADSED 98


>gi|154483682|ref|ZP_02026130.1| hypothetical protein EUBVEN_01386 [Eubacterium ventriosum ATCC
           27560]
 gi|149735592|gb|EDM51478.1| hypothetical protein EUBVEN_01386 [Eubacterium ventriosum ATCC
           27560]
          Length = 656

 Score = 39.6 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLC 67
            RL+ L+    DP +  N  +   + +E+      LD  +   + + D+L 
Sbjct: 606 DRLNELDELLADPAVSTNSAKLNEISKEQNEISERLDELMDQWEILSDQLD 656


>gi|323190408|gb|EFZ75683.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli RN587/1]
 gi|324112397|gb|EGC06374.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
          Length = 140

 Score = 39.6 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQKAR 105


>gi|170086814|ref|XP_001874630.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649830|gb|EDR14071.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 603

 Score = 39.6 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 2   KLSRQLNCLGGL-----FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L+ Q+  L GL     FD++   ++L+    + +      +  +   +M+E+   ++  
Sbjct: 443 ELTAQVIDLRGLIERLSFDFEA-DRKLAKEEAERKQKE---DEEKLAQIMKEKARAEHKA 498

Query: 57  SFIKEI---------QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
               E+         ++R   + ++  LA+ ++   ++ +  D   R   E+E +  + +
Sbjct: 499 EKATELARKFGNELREERAVSDGLMKNLAVMKERMELIDKQKDEYTRKVEELEDQVRDVM 558

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
              EA +      +  G GG E++     +       A+K K K + 
Sbjct: 559 FFLEAKTK-----IEHG-GGVEAEAAGGTVEVPVASTAQKLKGKKKI 599


>gi|167629832|ref|YP_001680331.1| abc transporter, ATP-binding protein, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167592572|gb|ABZ84320.1| abc transporter, ATP-binding protein, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 691

 Score = 39.6 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQD 64
             L  L D       +S L  + E P    +    + +M E   L   +   +E      
Sbjct: 114 AALEELADILAMRAEISHLEQEMERPETLADEGALEKVMAEYADL---VHRYEEGGGYGA 170

Query: 65  RLCDNLILLELALEEDDCSILQET 88
                 +L  L   EDD S+  E 
Sbjct: 171 EAKVRSVLRGLGFSEDDFSLPAEV 194


>gi|326674132|ref|XP_698830.5| PREDICTED: pleckstrin homology-like domain family B member 1-like
            [Danio rerio]
          Length = 1713

 Score = 39.6 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 40/103 (38%), Gaps = 15/103 (14%)

Query: 8    NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR-----ERQHLDNAISFIKEI 62
              +  L   D    R++ L  + ++    Q     + L++     E + ++     I ++
Sbjct: 930  ERVRVLAKVDELKARITELEQQLQESK--QEAEMERALLQGERQAEMEQIETETEIINQL 987

Query: 63   QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            Q +L +    ++   +++        ++ L+    + E  +F+
Sbjct: 988  QRKLTELESSIQREKDKE--------AETLEAATKQFEDLEFQ 1022


>gi|67521958|ref|XP_659040.1| hypothetical protein AN1436.2 [Aspergillus nidulans FGSC A4]
 gi|40745410|gb|EAA64566.1| hypothetical protein AN1436.2 [Aspergillus nidulans FGSC A4]
 gi|259486747|tpe|CBF84855.1| TPA: pentatricopeptide repeat protein (AFU_orthologue;
           AFUA_8G04250) [Aspergillus nidulans FGSC A4]
          Length = 861

 Score = 39.6 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 23/139 (16%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKE---------IQDRLCDNLIL------LELA 76
           DP   +++ E + + RE   LD+ +  +KE         IQ    D   +       + A
Sbjct: 66  DPE-AEDIAEKEEVARELSQLDHELESLKEDPFGPNSSFIQSLPEDERAIALEALRKQEA 124

Query: 77  LEEDDC-----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE--VHAGAGGTE 129
            +  D       +  E  DNL + + E    + E+ +  + DS    +        G +E
Sbjct: 125 RDGKDEPITFDDVFDEELDNLLKEEFEGLALEEENWMKKKDDSLQEVIRQPYEMAFGDSE 184

Query: 130 SQDWANMLLRMYTRWAEKR 148
             D+ +   R   R+A  +
Sbjct: 185 HSDYIDRFNRALKRFAADK 203


>gi|119715623|ref|YP_922588.1| class I peptide chain release factor [Nocardioides sp. JS614]
 gi|119536284|gb|ABL80901.1| class I peptide chain release factor [Nocardioides sp. JS614]
          Length = 150

 Score = 39.6 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 19/83 (22%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-------------------TGVVVQC 263
           + E +      R+ G GGQ VNTTDS V + +                     + V V  
Sbjct: 26  VPEGELVERFSRSPGPGGQSVNTTDSRVELEYDAAVSTVLDDAQRARVVGRLGSPVRVVA 85

Query: 264 QQERSQHKNKAQAWNMLRAKLYE 286
            + RSQH+N+  A   L  +L E
Sbjct: 86  SEHRSQHRNRVAARERLAERLRE 108


>gi|83595939|gb|ABC25299.1| peptidyl-tRNA hydrolase [uncultured marine bacterium Ant24C4]
          Length = 138

 Score = 39.6 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 26/122 (21%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------------------------ 253
           + +I + + +      RASG GGQ+VN   +AV +                         
Sbjct: 4   NEQITLEDWELTEQFTRASGPGGQNVNKVSTAVELRFEAGRSPNLTEAVKWRLRRVAGQK 63

Query: 254 HIPTGVVV-QCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQ 311
               G VV   Q  RSQ +N+  A   L+  + +  E+ KR         S      G++
Sbjct: 64  WTNEGAVVLFVQDTRSQARNREIAQKRLKDMILKACEVPKRRIGTKPTFGSVKRRLAGKK 123

Query: 312 IR 313
           +R
Sbjct: 124 VR 125


>gi|291413482|ref|XP_002722994.1| PREDICTED: immature colon carcinoma transcript 1 [Oryctolagus
           cuniculus]
          Length = 207

 Score = 39.6 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPT----------- 257
           W  P        +I      I   R+SG GGQHVN  +S   +  H+ T           
Sbjct: 60  WRIPEDAKQAGGDIPLDRLTISYCRSSGPGGQHVNKVNSKAEVRFHLATADWIAEPVRGK 119

Query: 258 -------------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
                         ++V  +  R Q +N A     +RA + E      E      +  K 
Sbjct: 120 IAVTHKNKINRCGELIVTSESSRYQFRNLADCLRKIRALIAEASQTPEEPSKEDAQLWKA 179

Query: 305 EIGWGRQIR 313
            I    + R
Sbjct: 180 RIESRNRER 188


>gi|76779896|gb|AAI06218.1| LOC734168 protein [Xenopus laevis]
          Length = 186

 Score = 39.6 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 25/122 (20%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPT------------------ 257
           D  E +I      I   ++SG GGQ+VN  ++   +  H+ +                  
Sbjct: 46  DQGEPDIPVDRLTISYCKSSGPGGQNVNKVNTKAEVRFHLASADWIPDDARQKISVQCKN 105

Query: 258 ------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
                  ++V  +Q R Q +N +     +R+ + +   + + +     +  +  +    +
Sbjct: 106 RINRSGELIVVSEQSRYQMENLSVCLEKIRSIVSDAMKRPKMQTKEDVDVRRARVEKSNR 165

Query: 312 IR 313
            R
Sbjct: 166 ER 167


>gi|227514364|ref|ZP_03944413.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum ATCC 14931]
 gi|227087230|gb|EEI22542.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum ATCC 14931]
          Length = 662

 Score = 39.6 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           KL R +  L    +     ++   + T+  DP +  ++ +   L +E     + L++   
Sbjct: 591 KLQRTVADLEEQMN--QLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 648

Query: 58  FIKEIQDRLCD 68
                 +RL +
Sbjct: 649 QWTAAAERLEE 659


>gi|62026292|gb|AAH92108.1| LOC733181 protein [Xenopus laevis]
          Length = 185

 Score = 39.6 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 25/122 (20%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPT------------------ 257
           D  E +I      I   ++SG GGQ+VN  ++   +  H+ +                  
Sbjct: 45  DQGEPDIPVDRLTISYCKSSGPGGQNVNKVNTKAEVRFHLASADWIPDDARQKISVQCKN 104

Query: 258 ------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
                  ++V  +Q R Q +N +     +R+ + +   + + +     +  +  +    +
Sbjct: 105 RINRSGELIVVSEQSRYQMENLSVCLEKIRSIVSDAMKRPKMQTKEDVDVRRARVEKSNR 164

Query: 312 IR 313
            R
Sbjct: 165 ER 166


>gi|221219026|ref|NP_001138231.1| pleckstrin homology-like domain family B member 1 isoform b [Homo
           sapiens]
 gi|119587806|gb|EAW67402.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_c
           [Homo sapiens]
 gi|119587810|gb|EAW67406.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_c
           [Homo sapiens]
 gi|261857568|dbj|BAI45306.1| pleckstrin homology-like domain, family B, member 1 [synthetic
           construct]
          Length = 1319

 Score = 39.6 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|114640675|ref|XP_001162652.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 13 [Pan troglodytes]
          Length = 1119

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 518 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 566

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 567 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 613


>gi|46205823|ref|ZP_00048045.2| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 153

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 25/99 (25%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP------------------ 256
           +  + +I I E +      RASG GGQ+VN   +AV++                      
Sbjct: 15  LHCTPQIAIDEDELEESFVRASGPGGQNVNKLSTAVQLRFDVRRSRSLPDAVAVRLMRLA 74

Query: 257 ----TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
               TG   +V+  Q+ R+Q +N+A A   L A + E  
Sbjct: 75  GRRLTGDGVLVITAQRFRTQERNRADARERLAAMVAEAA 113


>gi|326797843|ref|YP_004315662.1| ATP-binding cassette protein, ChvD family [Sphingobacterium sp. 21]
 gi|326548607|gb|ADZ76992.1| ATP-binding cassette protein, ChvD family [Sphingobacterium sp. 21]
          Length = 560

 Score = 39.2 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 5/101 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCDNLILLEL 75
             +     +N K   P +++N  E + LM  +  L + I      E+ +RL     +  L
Sbjct: 101 AILTEYEEINEKFGLPEVYENPDEMEKLMNRQGELQDKIDATGAWELDNRLE--RAMDAL 158

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSN 115
              + D SI   +    +R+ L  +  ++ + LL  E  ++
Sbjct: 159 RCPDPDASIANLSGGERRRVALCRLLLQEPDVLLLDEPTNH 199


>gi|224434591|dbj|BAB84896.2| FLJ00141 protein [Homo sapiens]
          Length = 1326

 Score = 39.2 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 725 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 773

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 774 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 820


>gi|219120729|ref|XP_002181097.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407813|gb|EEC47749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 132

 Score = 39.2 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 30/132 (22%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI-------THIPTGV-------------- 259
           I + ES       R+ GAGGQ+VN  ++ V+I       T +PT V              
Sbjct: 1   IHVPESQLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSK 60

Query: 260 ----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
               V+Q  + R+Q  N+  A      KL  +  Q  E        +   +    Q R  
Sbjct: 61  EQYLVMQVSEHRTQSANRKTAV----DKLRNMIRQAWERPKERSIRTGISVKTKEQ-RKD 115

Query: 316 VLQPYQMVKDLR 327
             +   +VK  R
Sbjct: 116 FKRKRSLVKQGR 127


>gi|119587808|gb|EAW67404.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_d
           [Homo sapiens]
          Length = 1387

 Score = 39.2 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 728 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 776

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 777 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 823


>gi|330720433|gb|EGG98747.1| Peptide chain release factor 1 [gamma proteobacterium IMCC2047]
          Length = 44

 Score = 39.2 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            D R N+      ++++GD+D  ++A +
Sbjct: 2   TDHRINLTLYKLPEIMEGDMDSVIQALV 29


>gi|325496123|gb|EGC93982.1| peptidyl-tRNA hydrolase domain protein [Escherichia fergusonii
           ECD227]
          Length = 140

 Score = 39.2 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103


>gi|238754782|ref|ZP_04616133.1| hypothetical protein yruck0001_5000 [Yersinia ruckeri ATCC 29473]
 gi|238706942|gb|EEP99308.1| hypothetical protein yruck0001_5000 [Yersinia ruckeri ATCC 29473]
          Length = 138

 Score = 39.2 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 31/114 (27%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG---VV 260
           +S+  +   RA GAGGQHVN + +A+ +                      H+ T    V+
Sbjct: 12  DSEIELTAIRAQGAGGQHVNKSSTAIHLRFDIKASSLPEYYKLRLLALNHHLVTADGIVI 71

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           ++ Q+ RSQ  N+  A   L A + +  + ++           T+   G +IR 
Sbjct: 72  IKAQEYRSQDMNREAALARLVALIRQAMVVEK-------TRRPTKPTKGSKIRR 118


>gi|225388684|ref|ZP_03758408.1| hypothetical protein CLOSTASPAR_02420 [Clostridium asparagiforme
           DSM 15981]
 gi|225045282|gb|EEG55528.1| hypothetical protein CLOSTASPAR_02420 [Clostridium asparagiforme
           DSM 15981]
          Length = 640

 Score = 39.2 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 17/106 (16%)

Query: 14  FDWDNAVQRLSFLNTK---------TEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQ 63
           FD     +R+  L  +             +   +VIEA+  L+  ++  +   +     +
Sbjct: 111 FDVPAVEERIKKLEEEIRILNLRIDLSANNGGNDVIEAQRKLVDAQKAYERIAAKYARTE 170

Query: 64  DRLCDNLILLELALEEDD-------CSILQETSDNLQRIKLEVEYK 102
           +RL ++   LE  L + +        S+++E  +NLQ ++ + E  
Sbjct: 171 ERLKEDYTKLEETLADAEKNLMNKAESLVKEARENLQNVREDAEDA 216


>gi|38424073|ref|NP_055972.1| pleckstrin homology-like domain family B member 1 isoform a [Homo
           sapiens]
 gi|221219024|ref|NP_001138230.1| pleckstrin homology-like domain family B member 1 isoform a [Homo
           sapiens]
 gi|74723506|sp|Q86UU1|PHLB1_HUMAN RecName: Full=Pleckstrin homology-like domain family B member 1;
           AltName: Full=Protein LL5-alpha
 gi|30314475|dbj|BAC76044.1| DLNB07 [Homo sapiens]
 gi|119587805|gb|EAW67401.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_b
           [Homo sapiens]
 gi|119587807|gb|EAW67403.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_b
           [Homo sapiens]
 gi|119587811|gb|EAW67407.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_b
           [Homo sapiens]
 gi|167887651|gb|ACA06041.1| pleckstrin homology-like domain family B member 1 variant 2 [Homo
           sapiens]
 gi|168267462|dbj|BAG09787.1| pleckstrin homology-like domain family B member 1 [synthetic
           construct]
          Length = 1377

 Score = 39.2 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 718 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 766

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 767 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 813


>gi|218547647|ref|YP_002381438.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia
           fergusonii ATCC 35469]
 gi|218355188|emb|CAQ87795.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 140

 Score = 39.2 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQKAR 105


>gi|299782881|gb|ADJ40879.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum CECT 5716]
          Length = 647

 Score = 39.2 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           KL R +  L    +     ++   + T+  DP +  ++ +   L +E     + L++   
Sbjct: 576 KLQRTVADLEEQMN--QLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633

Query: 58  FIKEIQDRLCD 68
                 +RL +
Sbjct: 634 QWTAAAERLEE 644


>gi|296214421|ref|XP_002753813.1| PREDICTED: X-linked retinitis pigmentosa GTPase
           regulator-interacting protein 1 [Callithrix jacchus]
          Length = 1284

 Score = 39.2 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 16/123 (13%)

Query: 3   LSRQLNCLGGLFDWDNAVQRL------SFLNTKT---EDPHLWQNVIEAKMLMRERQHLD 53
           L   L    G  +     ++L        L         P  W N + A+ L ++   L 
Sbjct: 354 LQMTLKEFQGRVEDLEKERKLLNDSYDKLLENMLDSSSQPD-WSNELIAERLQQQVSELQ 412

Query: 54  NAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
           + +    E++++     + LEL+ E   +  +  E  + LQ+ K E+E+ Q  + +S   
Sbjct: 413 DQLDA--ELEEKR---KVSLELSREKAQNEDLKLEVINILQKQKQELEHLQKAAEVSQPP 467

Query: 113 DSN 115
           D  
Sbjct: 468 DRR 470


>gi|156086092|ref|XP_001610455.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797708|gb|EDO06887.1| conserved hypothetical protein [Babesia bovis]
          Length = 183

 Score = 39.2 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVR-ITHIPT---GVVVQCQQERSQHKNKAQAWNMLRAK 283
            R    + +G GGQ VN + + V+ I + P     +VV+C + RS   N+ +A  +L  +
Sbjct: 67  LREYYIKGTGPGGQKVNKSSNCVQLIRYSPALGVNIVVKCHKHRSLLDNRIEATRILLRR 126

Query: 284 LYE---LELQKREEIANIGESSKTEIGWGRQIR 313
           L +    + +   +     +    ++    + R
Sbjct: 127 LDQAVTAQSRALRQAEEKSKRRILKLTAAEKAR 159


>gi|257428231|ref|ZP_05604629.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|258455561|ref|ZP_05703518.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|282905857|ref|ZP_06313712.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|257275072|gb|EEV06559.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257862249|gb|EEV85020.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|282331149|gb|EFB60663.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 402

 Score = 39.2 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +DN + +K + E+ +   L + 
Sbjct: 71  VERQVQDIEE-KEKAKVKDTGEAYQSLNDNEKLVKAKAEFYRHAILPNE 118


>gi|120553410|ref|YP_957761.1| ABC transporter related [Marinobacter aquaeolei VT8]
 gi|120323259|gb|ABM17574.1| ABC transporter related protein [Marinobacter aquaeolei VT8]
          Length = 648

 Score = 39.2 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 9/74 (12%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   Q+L+ +     DP L+ +  + +        L   ++   E++  L D      L 
Sbjct: 584 EQLQQKLATVEHNLADPGLYDDQQKLR--------LKELLAEQTELKRELDDVEAEW-LE 634

Query: 77  LEEDDCSILQETSD 90
           + E   ++  E + 
Sbjct: 635 VSETVENLEAELAG 648


>gi|20521113|dbj|BAA31613.2| KIAA0638 protein [Homo sapiens]
          Length = 1384

 Score = 39.2 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 725 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 773

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 774 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 820


>gi|254820195|ref|ZP_05225196.1| chaperone ClpB [Mycobacterium intracellulare ATCC 13950]
          Length = 848

 Score = 39.2 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 17/136 (12%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + +RL  L ++  D        +   L    Q+  NAI  ++E++++L       E A
Sbjct: 436 EASKERLEKLRSELADQK-----EKLAELTTRWQNEKNAIDVVRELKEQLEALRGESERA 490

Query: 77  LEEDD----CSIL----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG-- 126
             + D      +      E    L     + E ++   +L  E   +D    V A  G  
Sbjct: 491 ERDGDLAKAAELRYGRIPEVEKKLDAALPQAEARE-NVMLKEEVGPDDIADVVSAWTGIP 549

Query: 127 -GTESQDWANMLLRMY 141
            G   +     LLRM 
Sbjct: 550 AGRMLEGETAKLLRME 565


>gi|312377728|gb|EFR24487.1| hypothetical protein AND_10883 [Anopheles darlingi]
          Length = 726

 Score = 39.2 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 38/90 (42%), Gaps = 11/90 (12%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLI 71
           D++ A +R+  L  + E        ++A++  +E +     +      +E + +   + +
Sbjct: 576 DYEQAKERIRELEKQLE-------TLQAQLQEQEDKANKMYLHMYSKGQEAERQEQADRV 628

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEY 101
           L ++A +      + E    LQ  + E+E 
Sbjct: 629 L-DMARDSPSRVSVPELMQQLQVTQDELEN 657


>gi|254966702|gb|ACT97339.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
           bacterium AM_gF1DD01_09]
          Length = 140

 Score = 39.2 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I +++  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDNEYEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|74317541|ref|YP_315281.1| hypothetical protein Tbd_1523 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057036|gb|AAZ97476.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 141

 Score = 39.2 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 25/94 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT----HIPT-------------GVV 260
           + EIE+ E + + D  RASG GGQ+VN   SAV++     H P+             G  
Sbjct: 5   NAEIELDEREIQEDFVRASGPGGQNVNKVSSAVQLRFDVAHSPSLPQPVRDRLLVLAGRR 64

Query: 261 V--------QCQQERSQHKNKAQAWNMLRAKLYE 286
           V        + ++ RSQ +N+  A   L A + E
Sbjct: 65  VTQDGVLIIEAERYRSQRRNRDDALERLLALIRE 98


>gi|118380105|ref|XP_001023217.1| hypothetical protein TTHERM_00494240 [Tetrahymena thermophila]
 gi|89304984|gb|EAS02972.1| hypothetical protein TTHERM_00494240 [Tetrahymena thermophila
           SB210]
          Length = 718

 Score = 39.2 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  ++RL+ +NTK E         EA+ +  E + L  AI  IK + ++L +    L+  
Sbjct: 357 DAEIKRLADINTKLE--------KEAQKINEEDKKLKQAIDKIKMLDNKLSEKEDELKKQ 408

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
            +    +I   T       K + + ++  + L  E D+N
Sbjct: 409 QKSAVKAIKDATEKLAAESKEKQKLQEQYNKLKEELDAN 447


>gi|15828497|ref|NP_325857.1| ABC transporter ATP-binding protein [Mycoplasma pulmonis UAB CTIP]
 gi|14089439|emb|CAC13199.1| ABC TRANSPORTER ATP-BINDING PROTEIN [Mycoplasma pulmonis]
          Length = 600

 Score = 39.2 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 15/126 (11%)

Query: 2   KLSRQLNCLGGLFDWD-NAVQRLSFLNTKTEDPHLWQNVIEAK----MLMR--ERQHLDN 54
           +L +  + L  + D       R + + ++    +L  +   ++     L R  E   L  
Sbjct: 164 ELEQYTHQLHKVLDIKKELEHRYNNVKSQI---NLIDDEARSQFALVKLHRVAEISQLSK 220

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +     ++D    +  L+E   +E +   +    +  +  K +++ +   +LLS +   
Sbjct: 221 KV-----LEDVKKIDDELIEQIKDEKEKEKITHLKNEAKEQKNKLKAEYKANLLSIKEHY 275

Query: 115 NDAYLE 120
              +LE
Sbjct: 276 KKVHLE 281


>gi|85708088|ref|ZP_01039154.1| ABC transporter [Erythrobacter sp. NAP1]
 gi|85689622|gb|EAQ29625.1| ABC transporter [Erythrobacter sp. NAP1]
          Length = 604

 Score = 39.2 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 11/68 (16%)

Query: 15  DWDNAVQRLSFLNT-------KTEDPH-LWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           D++    R+  L            DP     +      + +    L+NA     E ++R 
Sbjct: 539 DYEQLPARIEELEAAIAKAEGILADPDLFASDPQRFATISK---GLENARRQKDEAEERW 595

Query: 67  CDNLILLE 74
            D    +E
Sbjct: 596 LDIAEKVE 603


>gi|126734066|ref|ZP_01749813.1| Class I peptide chain release factor [Roseobacter sp. CCS2]
 gi|126716932|gb|EBA13796.1| Class I peptide chain release factor [Roseobacter sp. CCS2]
          Length = 138

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 26/119 (21%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------------------------THIP 256
           IEI++ +      R+SG GGQ+VN   +AV +                            
Sbjct: 8   IEIADWELTESFTRSSGPGGQNVNKVSTAVELRFEAARSPNLPAQVKARLKRLAGRRWTQ 67

Query: 257 TGVVV-QCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIR 313
            G +V   Q  RSQ +N+  A   L   +    E  KR         S      G++ R
Sbjct: 68  DGALVLFVQDTRSQARNREIARERLAELIKRACEKPKRRIATKPTYGSVKRRLAGKKAR 126


>gi|73990088|ref|XP_863961.1| PREDICTED: similar to nephronophthisis 3 isoform 6 [Canis
           familiaris]
          Length = 2066

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 125 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 174

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 175 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 231

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 232 GTQCEYWTG 240


>gi|73990086|ref|XP_863943.1| PREDICTED: similar to nephronophthisis 3 isoform 5 [Canis
           familiaris]
          Length = 2040

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 99  LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 148

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 149 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 205

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 206 GTQCEYWTG 214


>gi|66395599|ref|YP_239938.1| ORF011 [Staphylococcus phage 3A]
 gi|62635945|gb|AAX91056.1| ORF011 [Staphylococcus phage 3A]
          Length = 387

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +D+ + +K + E+ +   L + 
Sbjct: 56  VERQVKDIEE-KEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNE 103


>gi|301162241|emb|CBW21786.1| putative heat shock ClpB protein [Bacteroides fragilis 638R]
          Length = 862

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 11/136 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-------IQDRLCD 68
            D   +++  L  + E      +  + + + +E   L       K        + D +  
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDEPKLQTIGKELAELKEQEKSYKAKWQSEKSLMDIIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N + +E    E D +  +     +     E+ Y + + L     D+     E+       
Sbjct: 470 NKVEIENLKFEADKAEREGNYGKVA----EIRYGKLQELHKEIEDTQKKLHEMQGDTAMI 525

Query: 129 ESQDWANMLLRMYTRW 144
           + +  A  +  + +RW
Sbjct: 526 KEEVDAEDIADVVSRW 541


>gi|291412970|ref|XP_002722746.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 2 [Oryctolagus cuniculus]
          Length = 1316

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 722 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERTLL 770

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE---VEYKQFESL 107
            +    +  L+  L   +  I QE     + ++ E    E  +F+ L
Sbjct: 771 QKEQKAVDQLQEKLVALETGIQQEREKEAEALETETKLFEDLEFQQL 817


>gi|160877083|ref|YP_001556399.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           baltica OS195]
 gi|160862605|gb|ABX51139.1| Class I peptide chain release factor [Shewanella baltica OS195]
          Length = 143

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E++      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 13  VELQENEIEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEFYQERLLNKADHRITKS 72

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             ++++CQ  RSQ  N   A     A +  +   +++ I             G Q R 
Sbjct: 73  GKIIIKCQASRSQDANSQTALEQFIALVASVGEVQKKRIPTRATK-------GSQTRR 123


>gi|127514290|ref|YP_001095487.1| hypothetical protein Shew_3362 [Shewanella loihica PV-4]
 gi|126639585|gb|ABO25228.1| Class I peptide chain release factor [Shewanella loihica PV-4]
          Length = 136

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           ++I++++      R+SGAGGQH+N   +A ++                      H  T  
Sbjct: 8   VQIADNELEWQFIRSSGAGGQHLNKVSTAAQLIFDIRQSSLPEFYQQRLLAKTDHRITKS 67

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++++CQ  RSQ  N+  A     A +  +    ++ +A
Sbjct: 68  GKIIIKCQASRSQDANRQTALEQFIALVASVGHTAKKRVA 107


>gi|226943534|ref|YP_002798607.1| ABC transporter ATP binding protein [Azotobacter vinelandii DJ]
 gi|226718461|gb|ACO77632.1| ABC transporter, ATP binding component [Azotobacter vinelandii DJ]
          Length = 639

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM--LMRERQHLDNAISFI 59
           KL R+L  + G    D     L+ L  +  DP  +Q    A+   L+   + L   +  +
Sbjct: 573 KLQRELEAIPG--QIDALEAELAELQERIADPAFYQQPA-AQTAPLLARLESLQQELDRL 629

Query: 60  KEIQDRLCDN 69
            E    L + 
Sbjct: 630 LERWAELEEA 639


>gi|323487818|ref|ZP_08093076.1| hypothetical protein GPDM_00685 [Planococcus donghaensis MPA1U2]
 gi|323398552|gb|EGA91340.1| hypothetical protein GPDM_00685 [Planococcus donghaensis MPA1U2]
          Length = 443

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ--ETSDNLQRIK 96
             +A  + + +  L+  I+ I E+  ++ +    +++A  E D + ++  E   +++ ++
Sbjct: 52  QQKASEISQNQTTLEKIIAKISELDSQIVETQDKIDVAQAEIDQTKVEIDELRKSIEELE 111

Query: 97  LEVEYKQ 103
            ++  ++
Sbjct: 112 RKIAERE 118


>gi|229815396|ref|ZP_04445731.1| hypothetical protein COLINT_02443 [Collinsella intestinalis DSM
           13280]
 gi|229809176|gb|EEP44943.1| hypothetical protein COLINT_02443 [Collinsella intestinalis DSM
           13280]
          Length = 670

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 8/78 (10%)

Query: 3   LSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS 57
           L+R+L              D    R   L        L+ +  +    + E   L   + 
Sbjct: 589 LNRRLKGTKDRLKKVEAELDVKRARYDELMALMASEELYADQDKFNAALVEYNGLKQELP 648

Query: 58  FIKEIQDRLCDNLILLEL 75
               ++D   +    +E 
Sbjct: 649 ---ALEDEWLELSTTIEE 663


>gi|150024115|ref|YP_001294941.1| chromosome segregation ATPase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149770656|emb|CAL42120.1| Putative chromosome segregation ATPase [Flavobacterium
           psychrophilum JIP02/86]
          Length = 1110

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 18/124 (14%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIE--AK--MLMRER------QH 51
           KL  +L  L    D D   ++L     K+      +N  +  A+   L +        + 
Sbjct: 598 KLLDELKRLNEKLDQDEIQEKLEKFEQKS------KNQTKTLAQLVELTKRYYVEKKAEQ 651

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L + +  + E +D+L D+        + +      +    L+ +  E   K+ +S L+  
Sbjct: 652 LADKLDKLSEKEDKLADDKKENSEEKQNEVNKEFDKIEKELKDLDKE--NKELKSPLAIP 709

Query: 112 ADSN 115
            D  
Sbjct: 710 HDKE 713


>gi|328544687|ref|YP_004304796.1| ABC transporter ATPase [polymorphum gilvum SL003B-26A1]
 gi|326414429|gb|ADZ71492.1| ABC transporter, ATPase subunit [Polymorphum gilvum SL003B-26A1]
          Length = 603

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 8/67 (11%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +    +L  L     DP L+  N      L  E   L          +D   +  + LE
Sbjct: 543 IEKLDAQLEKLQADMADPDLYSRNPDRFARLSAEITKLTEE-------KDAAEEQWLELE 595

Query: 75  LALEEDD 81
           +  EE +
Sbjct: 596 MLKEEAE 602


>gi|329664991|ref|NP_001192971.1| pleckstrin homology-like domain family B member 1 [Bos taurus]
 gi|297482748|ref|XP_002693171.1| PREDICTED: pleckstrin homology-like domain, family B, member 1 [Bos
           taurus]
 gi|296480231|gb|DAA22346.1| pleckstrin homology-like domain, family B, member 1 [Bos taurus]
          Length = 1380

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 721 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 769

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE---VEYKQFESL 107
            +    +  L+  L   + SI +E     + ++ E    E  +F+ L
Sbjct: 770 QKEQKAVDQLQEKLVTLETSIQKERDKEAEALETETKLFEDLEFQQL 816


>gi|168823089|ref|ZP_02835089.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205340613|gb|EDZ27377.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320084494|emb|CBY94287.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 140

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL   ++   A     +  E     +
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAVQKSRRATRPTRASKERRLSSK 122


>gi|60680697|ref|YP_210841.1| putative heat shock ClpB protein [Bacteroides fragilis NCTC 9343]
 gi|265762660|ref|ZP_06091228.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_16]
 gi|60492131|emb|CAH06894.1| putative heat shock ClpB protein [Bacteroides fragilis NCTC 9343]
 gi|263255268|gb|EEZ26614.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_16]
          Length = 862

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 11/136 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-------IQDRLCD 68
            D   +++  L  + E      +  + + + +E   L       K        + D +  
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDEPKLQTIGKELAELKEQEKSYKAKWQSEKSLMDIIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N + +E    E D +  +     +     E+ Y + + L     D+     E+       
Sbjct: 470 NKVEIENLKFEADKAEREGNYGKVA----EIRYGKLQELHKEIEDTQKKLHEMQGDTAMI 525

Query: 129 ESQDWANMLLRMYTRW 144
           + +  A  +  + +RW
Sbjct: 526 KEEVDAEDIADVVSRW 541


>gi|53712497|ref|YP_098489.1| endopeptidase Clp ATP-binding chain B [Bacteroides fragilis YCH46]
 gi|253563472|ref|ZP_04840929.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 3_2_5]
 gi|52215362|dbj|BAD47955.1| endopeptidase Clp ATP-binding chain B [Bacteroides fragilis YCH46]
 gi|251947248|gb|EES87530.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 3_2_5]
          Length = 862

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 11/136 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-------IQDRLCD 68
            D   +++  L  + E      +  + + + +E   L       K        + D +  
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDEPKLQTIGKELAELKEQEKSYKAKWQSEKSLMDIIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N + +E    E D +  +     +     E+ Y + + L     D+     E+       
Sbjct: 470 NKVEIENLKFEADKAEREGNYGKVA----EIRYGKLQELHKEIEDTQKKLHEMQGDTAMI 525

Query: 129 ESQDWANMLLRMYTRW 144
           + +  A  +  + +RW
Sbjct: 526 KEEVDAEDIADVVSRW 541


>gi|255551557|ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
 gi|223543912|gb|EEF45438.1| conserved hypothetical protein [Ricinus communis]
          Length = 894

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVI---EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
             V R   L  + ++   W N      A+ L +++  L +     +E++    +   L E
Sbjct: 550 KLVPRARELQNQLQEWTEWANQKVMQAARRLSKDKAELKSLRQEKEEVERLKKEKQTLEE 609

Query: 75  --LALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
             +    +  + L + S  ++R    V   + E+
Sbjct: 610 NTMKKLTEMENALCKASGQVERANSAVRRLEVEN 643


>gi|296417529|ref|XP_002838408.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634341|emb|CAZ82599.1| unnamed protein product [Tuber melanosporum]
          Length = 1326

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 10/85 (11%)

Query: 39  VIEAK----MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE----TSD 90
             + +     L   R+ L      I+E+++   DN +++E+A    D  + +E       
Sbjct: 349 QAKYQPQQAELTDLRKQLKEIRRTIEEMENIKQDNELMVEMATL--DREMAEEQTEALRA 406

Query: 91  NLQRIKLEVEYKQFESLLSGEADSN 115
            L+ ++ + E  + E  +  E ++ 
Sbjct: 407 ELEAVRGKAEELEMEVEILREENAE 431


>gi|328705346|ref|XP_001942809.2| PREDICTED: epidermal growth factor receptor substrate 15-like
           1-like [Acyrthosiphon pisum]
          Length = 665

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 17/116 (14%)

Query: 5   RQLNCLGGLFDWDNAV--QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
            +L  L    + D A   +RL  LN   ++  L            +     N ++ ++E 
Sbjct: 297 EELKTLEHKLEKDQAEMGKRLDELNNMLQNSQL------------QISQFKNKVNQLEEN 344

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + ++ D +   E AL E +   +    D+L    LE    +   LL    D+ +++
Sbjct: 345 KRQMEDTIESTEKALAEGNVYAIP---DSLLTFNLEFRDLECSRLLGKIVDNKNSF 397


>gi|24372107|ref|NP_716149.1| hypothetical protein SO_0513 [Shewanella oneidensis MR-1]
 gi|24345995|gb|AAN53594.1|AE015499_5 prokaryotic and mitochondrial release factors family protein
           [Shewanella oneidensis MR-1]
          Length = 137

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 24/81 (29%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           +E+ E++      R+SGAGGQ+VN   +A ++                      H  T  
Sbjct: 8   VELPENEIEWQFIRSSGAGGQNVNKVSTAAQLIFDIKNSSLPEFYQQRLLQKADHRITAS 67

Query: 258 -GVVVQCQQERSQHKNKAQAW 277
             ++++CQ  RSQ  N+  A 
Sbjct: 68  GKIIIKCQASRSQDANRQTAL 88


>gi|291412968|ref|XP_002722745.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 1 [Oryctolagus cuniculus]
          Length = 1363

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 722 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERTLL 770

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE---VEYKQFESL 107
            +    +  L+  L   +  I QE     + ++ E    E  +F+ L
Sbjct: 771 QKEQKAVDQLQEKLVALETGIQQEREKEAEALETETKLFEDLEFQQL 817


>gi|197117086|ref|YP_002137513.1| ABC transporter ATP-binding protein [Geobacter bemidjiensis Bem]
 gi|197086446|gb|ACH37717.1| ABC transporter, ATP-binding protein [Geobacter bemidjiensis Bem]
          Length = 648

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 14/48 (29%), Gaps = 1/48 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65
               L+ L      P  + +   A++       L +   S  +  +  
Sbjct: 601 KEGELAELEQAMAAPDFFSDHEAARLAGERHAQLTEEIASLYQAWESA 648


>gi|75676731|ref|YP_319152.1| hypothetical protein Nwi_2547 [Nitrobacter winogradskyi Nb-255]
 gi|74421601|gb|ABA05800.1| class I peptide chain release factor [Nitrobacter winogradskyi
           Nb-255]
          Length = 139

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 1/94 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I I E+D  I   RASG GGQ+VN   +A ++ +    + +         +   Q     
Sbjct: 8   IVIDENDIEISFIRASGPGGQNVNKLSTAAQLRYDTRRLTLAPDIAARLAQLAGQRMTRD 67

Query: 281 RAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
              +   +  + +E           E+     IR
Sbjct: 68  GVIVIHAQRFRTQERNRADATDRLIELLRQAAIR 101


>gi|332665930|ref|YP_004448718.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334744|gb|AEE51845.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 1111

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 35/93 (37%), Gaps = 10/93 (10%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLILLE 74
            +  ++R   L  +           EA+    E +     +    +E+Q++      L+E
Sbjct: 552 LEKLLERQKELEKQI---------KEAQKAFEENKKNQEQLGETPEELQEKQEMLEELME 602

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
              + +   ++++    +Q ++ +   +  E +
Sbjct: 603 SLEDPEMKELMEKIEKLMQEMEKDQALEMMEQM 635



 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISF 58
           ++L +++N        D   ++   L+ KTED       +E +   L +E + L+  +  
Sbjct: 656 LELEQEINKAAD--KLDEMAKKQEELSEKTEDKKEAAEQLEKQQEELNKEFEDLEKKMED 713

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           I++  + L +   +      +D    +++   ++Q  + ++E KQ
Sbjct: 714 IEKKNEELENPQKM------DDPKEEMEDIKQDMQDSEKQLEQKQ 752


>gi|293605771|ref|ZP_06688145.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815820|gb|EFF74927.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 138

 Score = 38.8 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 24/98 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTG------------------ 258
           I E D      RA GAGGQ+VN   SA      VR +H+P                    
Sbjct: 10  IDERDLTFSMIRAQGAGGQNVNKVSSAVHLRFDVRASHLPLEVQDALCAVSDHRISKEGV 69

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           +V++ Q  RSQ KN+A+A   L A +       +   A
Sbjct: 70  IVIKSQSFRSQEKNRAEAIERLVAMVRAAIQVDKPRRA 107


>gi|183234797|ref|XP_652571.2| DNA mismatch repair protein Msh2 [Entamoeba histolytica HM-1:IMSS]
 gi|169800906|gb|EAL47185.2| DNA mismatch repair protein Msh2, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 630

 Score = 38.8 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 51/121 (42%), Gaps = 16/121 (13%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR--ERQHLDNAISFI 59
           K++++L  + G +D      ++         P L       + L++   +  L++ +   
Sbjct: 60  KINKRLELVEGFYDNSGIRLKIKN-EELAIIPDL-------EKLIKGINKSDLESIVKLY 111

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDA 117
           + ++     +  + E   E ++ SI +E  + L++I  E+E  +    +L+  E   N  
Sbjct: 112 EAVRI----SKNIKEELKEMNNKSIEKEIIEPLEKITEEMEKFEEMVVTLIDIEETQNHV 167

Query: 118 Y 118
           +
Sbjct: 168 F 168


>gi|183234999|ref|XP_001914132.1| DNA mismatch repair protein Msh2 [Entamoeba histolytica HM-1:IMSS]
 gi|169800793|gb|EDS89090.1| DNA mismatch repair protein Msh2, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 630

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 51/121 (42%), Gaps = 16/121 (13%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR--ERQHLDNAISFI 59
           K++++L  + G +D      ++         P L       + L++   +  L++ +   
Sbjct: 60  KINKRLELVEGFYDNSGIRLKIKN-EELAIIPDL-------EKLIKGINKSDLESIVKLY 111

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDA 117
           + ++     +  + E   E ++ SI +E  + L++I  E+E  +    +L+  E   N  
Sbjct: 112 EAVRI----SKNIKEELKEMNNKSIEKEIIEPLEKITEEMEKFEEMVVTLIDIEETQNHV 167

Query: 118 Y 118
           +
Sbjct: 168 F 168


>gi|164657057|ref|XP_001729655.1| hypothetical protein MGL_3199 [Malassezia globosa CBS 7966]
 gi|159103548|gb|EDP42441.1| hypothetical protein MGL_3199 [Malassezia globosa CBS 7966]
          Length = 434

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 17/94 (18%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
             D D+    L   N  +                +E++ L N IS  +  ++R  + + L
Sbjct: 270 SLDLDDLRPSLEEYNKLSS---------------KEKRQLRNKISA-RNFRNRRKEYITL 313

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           LE  L+E D S+++   D L  I+LE  + Q E 
Sbjct: 314 LEDQLKERD-SVIRHLQDQLSSIRLENHHLQEEL 346


>gi|198415959|ref|XP_002120825.1| PREDICTED: similar to predicted protein, partial [Ciona
           intestinalis]
          Length = 3238

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  + G +D       +  +N +  D        + + L +  +  +  +     ++ ++
Sbjct: 25  IESVNGYYDILWLELEIEKINQELLD--F---QNKCRKLPKALKEWEAFLD----LKKKI 75

Query: 67  CDNLI---LLELALEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSND 116
            D      LLE+   +   +   E    +     +VE + F+        LL+ + D  D
Sbjct: 76  DDFSECCPLLEMMANKAMMNRHWERIAKITSHTFDVENENFQLRNIMEAPLLANKEDIED 135

Query: 117 AYL 119
             +
Sbjct: 136 VCI 138


>gi|251795070|ref|YP_003009801.1| ABC transporter [Paenibacillus sp. JDR-2]
 gi|247542696|gb|ACS99714.1| ABC transporter related [Paenibacillus sp. JDR-2]
          Length = 642

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 1/50 (2%)

Query: 7   LNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
           +  +  +F     A Q L  L  +  DP L  N    + ++       + 
Sbjct: 83  IEEMRAVFSHLIEAEQELRELERQIADPALHDNPKRYEDVLDRYSRKSDW 132


>gi|315045844|ref|XP_003172297.1| DENN domain-containing protein [Arthroderma gypseum CBS 118893]
 gi|311342683|gb|EFR01886.1| DENN domain-containing protein [Arthroderma gypseum CBS 118893]
          Length = 916

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 26/149 (17%)

Query: 1   MKLSRQLNCLGGLFDWD--NAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           ++  +    L G  D +     +R +FL  + E       +    A+ L +E   L   I
Sbjct: 508 LEAWQDFINLKGRMDTELTKVTKRNNFLVEELETWKQQFLKFQKFAEQLTKETSELKVKI 567

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D++I L L       + DD          I +E     +R +
Sbjct: 568 ETHKRESRRLTSLIDQQKDDIIRLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNE 627

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHA 123
            E+   Q    +LL    D+    + + +
Sbjct: 628 KEIASLQHTNSNLLRQRDDAQRVVIHLRS 656


>gi|126651230|ref|ZP_01723440.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905]
 gi|126592068|gb|EAZ86134.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905]
          Length = 551

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 17/48 (35%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
             LG   +   A + L  L  +  +P    N  + + +M+      + 
Sbjct: 95  EMLGAFTELQEAEKELRELEMQMGEPSCINNPEKLEQVMKIYASKSDW 142


>gi|319784383|ref|YP_004143859.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170271|gb|ADV13809.1| ABC transporter related protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 625

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKE 61
           L++++     L D     +R+  +  +  +P +++ +   A  L +ER  L   ++  +E
Sbjct: 553 LAKEIRATEALMD--RIRKRIDGIEDELSNPAVYEKDPSTATRLAKERSQLAQTLAGHEE 610


>gi|300726792|ref|ZP_07060222.1| ATP-dependent chaperone ClpB [Prevotella bryantii B14]
 gi|299775905|gb|EFI72485.1| ATP-dependent chaperone ClpB [Prevotella bryantii B14]
          Length = 862

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 53/139 (38%), Gaps = 17/139 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEIQDRLCD 68
            D   +RL  L  + E      +  +   L +E   L +            + + +++  
Sbjct: 410 LDELNRRLKQLEIEREAIKRENDTDKIAHLDKEIAELKDKEKDYRAKWEGERALVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG- 127
           +   +E    E +     E   N +R+  E+ Y + + L   + D ++  L++ A  GG 
Sbjct: 470 DKQEIENLKYEAE---RAEREGNYERV-AEIRYSKLQQL---QQDIDNIQLQLKATQGGE 522

Query: 128 --TESQDWANMLLRMYTRW 144
                +  ++ +  + +RW
Sbjct: 523 AMVREEVTSDDIAEVVSRW 541


>gi|296806565|ref|XP_002844092.1| DENN domain-containing protein [Arthroderma otae CBS 113480]
 gi|238845394|gb|EEQ35056.1| DENN domain-containing protein [Arthroderma otae CBS 113480]
          Length = 917

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 26/149 (17%)

Query: 1   MKLSRQLNCLGGLFDWD--NAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           ++  +    L G  D +     +R +FL  + E       +    A+ L +E   L   I
Sbjct: 508 LEAWQDFINLKGRMDTELTKVTKRNNFLVEELETWKQQFLKFQKFAEQLTKETSDLKVKI 567

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D++I L L       + DD          I +E     +R +
Sbjct: 568 ETHKRESRRLTSLIDQQKDDIIRLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNE 627

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHA 123
            E+   Q    +LL    D+    + + +
Sbjct: 628 KEISSLQHTNSNLLRQRDDAQRVVIHLRS 656


>gi|110640411|ref|YP_668139.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 536]
 gi|191172758|ref|ZP_03034295.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300990439|ref|ZP_07179207.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1]
 gi|110342003|gb|ABG68240.1| peptidyl-tRNA hydrolase [Escherichia coli 536]
 gi|190906908|gb|EDV66510.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|254966722|gb|ACT97354.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
           AM_gF3SD01_02]
 gi|254966729|gb|ACT97359.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
           AM_gF3SD01_04]
 gi|254966742|gb|ACT97368.1| hypothetical protein [mixed culture bacterium AM_gF3SD01_08]
 gi|300305739|gb|EFJ60259.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1]
 gi|324014123|gb|EGB83342.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 60-1]
          Length = 140

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|152995502|ref|YP_001340337.1| L-carnitine dehydratase/bile acid-inducible protein F [Marinomonas
           sp. MWYL1]
 gi|150836426|gb|ABR70402.1| L-carnitine dehydratase/bile acid-inducible protein F [Marinomonas
           sp. MWYL1]
          Length = 411

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ--HLDNAISFIKEIQDRLCDNLILLE 74
           D+  +R   L    E P L  +   A+   R ++   LD AI      Q  L D L +LE
Sbjct: 268 DSIFKR---LMNAMERPDLANDPELAQNDGRAKRSDELDEAIQAWTS-QHSLKDALAILE 323

Query: 75  LAL 77
            A 
Sbjct: 324 EAA 326


>gi|323439019|gb|EGA96752.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus O11]
          Length = 402

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +D+ + +K + E+ +   L + 
Sbjct: 71  VERQVKDIEE-KEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNE 118


>gi|91794526|ref|YP_564177.1| ABC transporter related [Shewanella denitrificans OS217]
 gi|91716528|gb|ABE56454.1| ABC transporter related [Shewanella denitrificans OS217]
          Length = 650

 Score = 38.8 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 11/80 (13%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISF- 58
           KL  +L         D    RL  L     D  L+    +A+   ++ ER  L  A+   
Sbjct: 575 KLQAKLETAQ-----DKYATRLKELEAALADTSLYDAENKAQMTAVLNERTQLTQAMEES 629

Query: 59  ---IKEIQDRLCDNLILLEL 75
                E+Q+++ +  +  EL
Sbjct: 630 EMNWLELQEQIDEIELEFEL 649


>gi|15643303|ref|NP_228347.1| hypothetical protein TM0537 [Thermotoga maritima MSB8]
 gi|4981051|gb|AAD35622.1|AE001729_2 hypothetical protein TM_0537 [Thermotoga maritima MSB8]
          Length = 758

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 49/111 (44%), Gaps = 22/111 (19%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L+++L+ L      +   + +  L  K++D          K +M++       +S ++
Sbjct: 239 IELAQKLDYLRER--GEELKREIESLEEKSKDTE-----ERLKTIMKDFS-----VSSLE 286

Query: 61  EIQDRLCDNLILLELALEEDDCSI----------LQETSDNLQRIKLEVEY 101
           E++ +L +  + +EL   E    +          L+E  + L+ I+ ++E 
Sbjct: 287 ELKLKLENMKLQIELVENEQKAKLNEIIGHLREPLREIDEKLEEIQAKIEN 337


>gi|312959622|ref|ZP_07774139.1| ABC transporter-like protein [Pseudomonas fluorescens WH6]
 gi|311286339|gb|EFQ64903.1| ABC transporter-like protein [Pseudomonas fluorescens WH6]
          Length = 639

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R+L  L G  D D   Q+++ +  +  D   +Q    A    +    L+     ++ 
Sbjct: 574 KLQRELEALPG--DIDAKEQQIAAVEAEMADAGFYQRP--AAETAKVIASLEALNQELEV 629

Query: 62  IQDRLCDNLI 71
           + +R  +   
Sbjct: 630 LVERWAELDA 639


>gi|322421144|ref|YP_004200367.1| ABC transporter-like protein [Geobacter sp. M18]
 gi|320127531|gb|ADW15091.1| ABC transporter related protein [Geobacter sp. M18]
          Length = 648

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 2/63 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            R+L  +            L+ L  K   P  + +   A+        L   I+ + E  
Sbjct: 588 ERKLTEIED--KIGTKEGELAKLEEKMAAPEFFADHEAARAAGERHAQLTAEIAALYEAW 645

Query: 64  DRL 66
           + +
Sbjct: 646 ESI 648


>gi|167385347|ref|XP_001737309.1| DNA mismatch repair protein MsH2 [Entamoeba dispar SAW760]
 gi|165899926|gb|EDR26406.1| DNA mismatch repair protein MsH2, putative [Entamoeba dispar
           SAW760]
          Length = 630

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 54/122 (44%), Gaps = 18/122 (14%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMR--ERQHLDNAISF 58
           K++++L  + G   ++N+  RL   N +    P L       + L++   +  L++ +  
Sbjct: 60  KINKRLELVEGF--YENSEIRLKIKNEELAIMPDL-------EKLIKGINKSDLESIVKL 110

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSND 116
            + ++     +  + E   E ++  I +E  + L+RI  E+E  +    +L+  E   N 
Sbjct: 111 YEAVRI----SKSIKEELKEMNNKEIEKEIIEPLERISEEMEKFEEMVVTLIDIEETKNH 166

Query: 117 AY 118
            +
Sbjct: 167 VF 168


>gi|88770803|gb|ABD52004.1| ClpB [Methanohalophilus portucalensis FDF-1]
          Length = 869

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 22/100 (22%)

Query: 40  IEAKMLMRERQHL--------------DNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
              + L +E   +                 I+ +  I++++ D    LELA  E D    
Sbjct: 441 ERLQSLEKEISEIRAESDAMRTRWENEKATIAKLNSIKEQIDDTKTQLELAETEGDFEKA 500

Query: 84  ------ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
                  L       +  +  ++ KQ   LL  E D  D 
Sbjct: 501 SRLKYGTLVPLQHEYEEEENRLKEKQTNMLLKEEVDEEDI 540


>gi|196249979|ref|ZP_03148674.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Geobacillus sp.
           G11MC16]
 gi|196210493|gb|EDY05257.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Geobacillus sp.
           G11MC16]
          Length = 360

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71
            D    R+  +N +               L+ ER  L   I  IKE Q     + +    
Sbjct: 6   LDELRARVDEINLQLL------------KLINERGRLVQEIGKIKEAQGTHRYDPVRERK 53

Query: 72  LLELALEEDD----CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGA 125
           +L+L  E +D     S LQ     + +  LE++        L+S +    +  +EV    
Sbjct: 54  MLDLISEHNDGPFETSTLQHIFKEIFKAALELQEDDHRKALLVSRKKHPENTIVEVKGER 113

Query: 126 GGTESQDWA 134
            G  +Q + 
Sbjct: 114 IGDGNQYFV 122


>gi|113676998|ref|NP_001038590.1| serine/threonine-protein kinase MRCK beta [Danio rerio]
 gi|55251137|emb|CAH69154.1| novel protein similar to vertebrate CDC42 binding protein kinase
           beta (DMPK-like) (CDC42BPB) [Danio rerio]
 gi|190337634|gb|AAI63554.1| CDC42 binding protein kinase beta (DMPK-like) [Danio rerio]
          Length = 1708

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 2   KLSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHL---------WQNVIEAKMLMRE--R 49
           KL+ +++ L     D D    +L      T                  ++A  L +E   
Sbjct: 485 KLNEEIDRLKKKLADSDRLEHQLEE--AVTLRQDFESSSTKLKALDKQVKALKLEKEDIH 542

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQFES 106
           + L  ++  +K     L D     +LA++E  +    + E     QR+  ++  K+ E 
Sbjct: 543 KQLVESLDRLKSQTKELKDAHQQRKLAMQEFSEVNERMAELRSQKQRLSRQLRDKEEEM 601


>gi|125550795|gb|EAY96504.1| hypothetical protein OsI_18406 [Oryza sativa Indica Group]
          Length = 868

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--A 76
            VQR   L     D   W +  + + +M+  + L      +  ++    +   L E    
Sbjct: 526 LVQRQKELQAHMRD---WTDWAQ-QKVMQVTRRLAKEKEELHSLRKEKEEADRLQEERHN 581

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ 103
           LEE     L E    + R   ++E  +
Sbjct: 582 LEESTRKKLLEMESAISRANTQLEKAE 608


>gi|73954683|ref|XP_546499.2| PREDICTED: similar to pleckstrin homology-like domain, family B,
           member 1 isoform 1 [Canis familiaris]
          Length = 1381

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 20/147 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 722 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 770

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +    +  L+     LE        + ++ L+      E  +F+ L        +  L 
Sbjct: 771 QKEQKAVDQLQEKLVTLETGIQKERDKEAEALETETKLFEDLEFQQLERESRVEEEREL- 829

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEK 147
             AG G   SQ     LLR  T+  E+
Sbjct: 830 --AGQGLLRSQ---AELLRSITKRKER 851


>gi|327543117|gb|EGF29553.1| Class I peptide chain release factor [Rhodopirellula baltica WH47]
          Length = 189

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 8/112 (7%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------VVVQCQQERSQHKNKAQ 275
           E  E  C++ T   SG GGQH N T S   +T   +G      +  +  ++R Q +N++ 
Sbjct: 17  EQLEKRCQLRTQSRSGPGGQHRNRTASGAFLT-FDSGVAEMGPITAEATEQRQQGRNRSM 75

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR-SYVLQPYQMVKDL 326
           A   +R  L             + +S         ++R  Y   P ++ +D 
Sbjct: 76  ALARMRYLLAVTLRSDSSLHPELNDSDVVSSEAESELRDRYRGSPMKLNEDN 127


>gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium leprae TN]
 gi|221230822|ref|YP_002504238.1| heat shock protein [Mycobacterium leprae Br4923]
 gi|54035895|sp|Q9CB26|CLPB_MYCLE RecName: Full=Chaperone protein ClpB
 gi|13094038|emb|CAC32007.1| heat shock protein [Mycobacterium leprae]
 gi|219933929|emb|CAR72589.1| heat shock protein [Mycobacterium leprae Br4923]
          Length = 848

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 12/117 (10%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + +RL  L  +  D            L    Q+  NAI  ++E++++L       E A
Sbjct: 436 EASKERLETLRAELADQK-----ERLAELTARWQNEKNAIDVVRELKEQLETLRGESERA 490

Query: 77  LEEDDCSILQETS-DNLQRIKLEVE------YKQFESLLSGEADSNDAYLEVHAGAG 126
             + D +   E     +  ++ ++E        + + +L  E   +D    V A  G
Sbjct: 491 ERDGDLAKAAELRYGRIPEVEKKLEAAVPTAQAREDVMLKEEVGPDDIANVVSAWTG 547


>gi|323964915|gb|EGB60381.1| RF-1 domain-containing protein [Escherichia coli M863]
 gi|327255171|gb|EGE66774.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_7v]
          Length = 140

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I   +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPNGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + EL  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQKAR 105


>gi|145353655|ref|XP_001421122.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145357248|ref|XP_001422832.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581358|gb|ABO99415.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583076|gb|ABP01191.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1544

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 41   EAKMLMRERQHLDNAISFIKEIQDRLC-------DNLILLELALEEDDCSILQETSDNLQ 93
            EA+ LM+E  +L   +  ++ +++R+        D    +E   E+     L E   + +
Sbjct: 1251 EAQELMKESSNLKLFVKEVEALEERVEAAEEWDVDAKDAIERWREDGAEVTLTELELSHE 1310

Query: 94   RIKLEVEYKQ 103
               LE+   +
Sbjct: 1311 DFGLELPAME 1320


>gi|115462011|ref|NP_001054605.1| Os05g0141500 [Oryza sativa Japonica Group]
 gi|46391116|gb|AAS90643.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578156|dbj|BAF16519.1| Os05g0141500 [Oryza sativa Japonica Group]
 gi|215737235|dbj|BAG96164.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 868

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--A 76
            VQR   L     D   W +  + + +M+  + L      +  ++    +   L E    
Sbjct: 526 LVQRQKELQAHMRD---WTDWAQ-QKVMQVTRRLAKEKEELHSLRKEKEEADRLQEERHN 581

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ 103
           LEE     L E    + R   ++E  +
Sbjct: 582 LEESTRKKLLEMESAISRANTQLEKAE 608


>gi|32477567|ref|NP_870561.1| peptide chain release factor [Rhodopirellula baltica SH 1]
 gi|32448121|emb|CAD77638.1| conserved hypothetical protein-putative peptide chain release
           factor [Rhodopirellula baltica SH 1]
          Length = 210

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------VVVQCQQERSQHKNKAQ 275
           E  E  C++ T   SG GGQH N T S   +T   +G      +  +  ++R Q +N++ 
Sbjct: 38  EQLEKRCQLRTQSRSGPGGQHRNRTASGAFLT-FDSGVAEMGPITAEATEQRQQGRNRSM 96

Query: 276 AWNMLRAKL 284
           A   +R  L
Sbjct: 97  ALARMRYLL 105


>gi|151943670|gb|EDN61980.1| ubiquitin ligase (E3) [Saccharomyces cerevisiae YJM789]
          Length = 910

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKML-MRERQHLDNAISFIKE 61
           L   +  L  +++ D+   RL FL+++  +P  W+N  + + L +R  + L       +E
Sbjct: 403 LKEAVPLLSKVYERDS---RLHFLSSE-NNPTYWENSEK-QFLNLRFYEELQEYEDLYRE 457

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA 112
             +   D  +  E+ L+++  S+     + + +R+K  + +++ E LL    
Sbjct: 458 HLEEESDEDMEKEIDLDKERPSLKSLLLNKMKKRLKSSLRFRKLEILLELPF 509


>gi|3924605|gb|AAC79106.1| putative inhibitor of apoptosis [Arabidopsis thaliana]
 gi|7269785|emb|CAB77785.1| putative protein [Arabidopsis thaliana]
          Length = 864

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 9/163 (5%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V R+  L  + +D   W N    +  +R  +     +  +++ ++   +     +L  
Sbjct: 470 KLVPRMKDLQKELQDWTDWANQKVKQATVRLLKD-QPELKALRKEKEEAEEFRKEKQLLE 528

Query: 78  E------EDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDAYLEVHAGAGGTES 130
           E       +    L   ++ L+R    +   + E SLL  E ++ +      A +   E+
Sbjct: 529 ENTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRASESAESC-REA 587

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           ++    LL+    W  ++    E L+    + AG++      K
Sbjct: 588 KERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAK 630


>gi|17232188|ref|NP_488736.1| peptidyl-tRNA hydrolase domain protein [Nostoc sp. PCC 7120]
 gi|17133833|dbj|BAB76395.1| alr4696 [Nostoc sp. PCC 7120]
          Length = 137

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 24/91 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH------IPTGV------------ 259
           S +I I +S+  I   R+ GAGGQ+VN   +A+ +        +PT              
Sbjct: 5   SQKIIIPDSEIEISAIRSQGAGGQNVNKVSTAIHLRFNIEASSLPTFYKEQLLKLNDRRI 64

Query: 260 ------VVQCQQERSQHKNKAQAWNMLRAKL 284
                 V++ Q+ RSQ +NK +A   L+  +
Sbjct: 65  NQEGVVVIKAQEHRSQEQNKEEALQRLKELI 95


>gi|302670497|ref|YP_003830457.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus
           B316]
 gi|302394970|gb|ADL33875.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus
           B316]
          Length = 692

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLI 71
           D      R   +  +  DP +  ++ + + L  E+  + + +S    E +    +   
Sbjct: 634 DISKLEGRDGEITEQLSDPSVGTDLAKLRKLTDEQTEIQDKLSSLYDEWEKISSELSE 691


>gi|262052893|ref|ZP_06025076.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus 930918-3]
 gi|259159200|gb|EEW44261.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus 930918-3]
 gi|283469603|emb|CAQ48814.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus ST398]
 gi|283470728|emb|CAQ49939.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 387

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +D+ + +K + E+ +   L + 
Sbjct: 56  VERQVQDIEE-KEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNE 103


>gi|224087683|ref|XP_002194036.1| PREDICTED: epidermal growth factor receptor pathway substrate
           15-like 1 [Taeniopygia guttata]
          Length = 906

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D     L  L  + +D            + +++  L + ++ +++        +  L+
Sbjct: 469 DLDRETSNLQELEAQKQDA-----QDRLDEMDQQKAKLKDMLNDVRQKCQEETQVISSLK 523

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           + ++  +  + +   D+L R K E+   Q E
Sbjct: 524 MQIQSQESDL-KLQEDDLNRAKAELNRLQQE 553


>gi|118103338|ref|XP_418263.2| PREDICTED: similar to Eps15R [Gallus gallus]
          Length = 887

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D     L  L  + +D            + +++  L + ++ +++        +  L+
Sbjct: 450 DLDRETSNLQELEAQKQDA-----QDRLDEMDQQKAKLKDMLNDVRQKCQEETQVISSLK 504

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           + ++  +  +  +  D+L R K E+   Q E
Sbjct: 505 MQIQSQESDLKSQ-EDDLNRAKAELNRLQQE 534


>gi|26246139|ref|NP_752178.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli CFT073]
 gi|218688067|ref|YP_002396279.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           ED1a]
 gi|227884895|ref|ZP_04002700.1| Trna hydrolase domain protein [Escherichia coli 83972]
 gi|300993587|ref|ZP_07180443.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1]
 gi|301049894|ref|ZP_07196820.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1]
 gi|306815209|ref|ZP_07449358.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101]
 gi|331645335|ref|ZP_08346446.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
 gi|331681577|ref|ZP_08382214.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
 gi|26106536|gb|AAN78722.1|AE016755_222 Hypothetical protein yaeJ [Escherichia coli CFT073]
 gi|218425631|emb|CAR06417.1| conserved hypothetical protein [Escherichia coli ED1a]
 gi|222032022|emb|CAP74761.1| Uncharacterized protein yaeJ [Escherichia coli LF82]
 gi|227838033|gb|EEJ48499.1| Trna hydrolase domain protein [Escherichia coli 83972]
 gi|254966714|gb|ACT97348.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
           AM_gF1DD01_14]
 gi|281177417|dbj|BAI53747.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300298347|gb|EFJ54732.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1]
 gi|300406510|gb|EFJ90048.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1]
 gi|305850871|gb|EFM51326.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101]
 gi|307552042|gb|ADN44817.1| peptidyl-tRNA hydrolase [Escherichia coli ABU 83972]
 gi|312944800|gb|ADR25627.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315294596|gb|EFU53943.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 153-1]
 gi|315300664|gb|EFU59891.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 16-3]
 gi|330910042|gb|EGH38552.1| YaeJ-like protein [Escherichia coli AA86]
 gi|331046092|gb|EGI18211.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
 gi|331081798|gb|EGI52959.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
          Length = 140

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|88602031|ref|YP_502209.1| hypothetical protein Mhun_0737 [Methanospirillum hungatei JF-1]
 gi|88187493|gb|ABD40490.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
          Length = 1282

 Score = 38.8 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 96/296 (32%), Gaps = 39/296 (13%)

Query: 38   NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
            N    + L++E        + +KE Q  L +    +  + EE   S+ Q   ++ +   +
Sbjct: 871  NPDRLESLIQEVLAARTQYTGLKETQHELNELEKQIR-SYEEQVYSLRQLIEESTKDSTI 929

Query: 98   EVEYKQFESLLSGEAD---SNDAYLE-VHAGAGGTESQDWANMLLRMYT----------- 142
                ++  SLLS E D     D+ +E +       ++Q     L++M             
Sbjct: 930  NFLTERLVSLLSNEKDIVRKRDSMIERIKGCKERIDNQKKERELVQMEEESLLSESGVPD 989

Query: 143  --RWAEKRKF---KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
               + E R     K   ++  D E A I       +G N        Q  H L   S  +
Sbjct: 990  YDSYCEYRSMLQRKKNVIQEIDQEIAIINRICGDPQGYN--------QVSHELSLQSKDE 1041

Query: 198  SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              +   T  S +         I+ EI      I+  + S    +  N       I H   
Sbjct: 1042 VMAAIETGSSRVSKLREQISIIDREIGSIGTEIEILKQS----EEHNRLLLERNIIHT-- 1095

Query: 258  GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
                   +   +   +  A  MLR  L + E +K+  + +        +  G   R
Sbjct: 1096 ----SIHEYAQKWAVQTLAAEMLRQSLEKFEREKQPAVVSKATEYFRMMTNGAYSR 1147


>gi|313668005|ref|YP_004048289.1| hypothetical protein NLA_6650 [Neisseria lactamica ST-640]
 gi|313005467|emb|CBN86902.1| hypothetical membrane protein [Neisseria lactamica 020-06]
          Length = 997

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 9/82 (10%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF----I 59
            + L+ +    D +N    L+ LN +  +        + K L ++ + L+  I      I
Sbjct: 435 KKTLDNVNKKLDEENK--ELAELNKELAESG---ENEKRKELEKKVKSLEYKIQSKKRQI 489

Query: 60  KEIQDRLCDNLILLELALEEDD 81
           + +++ +    +L E     ++
Sbjct: 490 ERLKEDIERVAVLEEEIKRSEE 511


>gi|258427136|ref|ZP_05688058.1| bacteriophage capsid protein [Staphylococcus aureus A9299]
 gi|257849914|gb|EEV73873.1| bacteriophage capsid protein [Staphylococcus aureus A9299]
          Length = 402

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +D+ + +K + E+ +   L + 
Sbjct: 71  VERQVQDIEE-KEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNE 118


>gi|257469556|ref|ZP_05633648.1| hypothetical protein FulcA4_09468 [Fusobacterium ulcerans ATCC
           49185]
 gi|317063796|ref|ZP_07928281.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
 gi|313689472|gb|EFS26307.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
          Length = 336

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            L++E+Q+++  I  +KE+QD +       E    E++  I  E  +    +  + E  Q
Sbjct: 200 ELVKEKQNINELIKSLKELQDEIEQREKAKE---NENNLQIFDEELEVEYNLSKKNETDQ 256

Query: 104 FESLLSGEADSNDAYLEVHAGAGGT 128
            E       D       V +G GG 
Sbjct: 257 LEKEKKIYIDDRGWIFYVRSGIGGE 281


>gi|240172144|ref|ZP_04750803.1| putative endopeptidase ATP binding protein chain b [Mycobacterium
           kansasii ATCC 12478]
          Length = 848

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 14/118 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + +RL  L  +  D        +   L    Q+  NAI  ++E++++L       E A
Sbjct: 436 EASKERLEKLRAELADQK-----EKLAELTARWQNEKNAIEIVRELKEQLEALRGESERA 490

Query: 77  LEEDD----CSIL----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             + D      +      E    L     E + ++ + +L  E   +D    V A  G
Sbjct: 491 ERDGDLAKAAELRYGRIPEVEKKLDAALPEAQARE-QVMLKEEVGPDDIADVVSAWTG 547


>gi|184154799|ref|YP_001843139.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO
           3956]
 gi|183226143|dbj|BAG26659.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO
           3956]
          Length = 647

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R +  L    +     ++   + T+  DP +  ++ +   L +E   L   +  ++E
Sbjct: 576 KLQRTVADLEEQMN--QLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633


>gi|322712198|gb|EFZ03771.1| myosin type II heavy chain [Metarhizium anisopliae ARSEF 23]
          Length = 2388

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 16/115 (13%)

Query: 1    MKLSRQLNCLGGL-FDWDNAVQRL----SFLNTKTEDPHLWQNVIEAK----MLMRERQH 51
            +++ + L     L  D +   +RL    + L  K        +    +     LM  +  
Sbjct: 971  VRIQQTLESERALALDKEEIFKRLQTREAELEEKLS--GAIDDQERLEDQLDELMEAKSR 1028

Query: 52   LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
             +  +   +    +L     L+  A  E++ S L   S  L+    E+  KQ E 
Sbjct: 1029 AEEDVEKFRH---QLEQAAGLI--AKLEEEKSKLSAKSVELENAVKEISRKQSER 1078


>gi|254431251|ref|ZP_05044954.1| class I peptide chain release factor [Cyanobium sp. PCC 7001]
 gi|197625704|gb|EDY38263.1| class I peptide chain release factor [Cyanobium sp. PCC 7001]
          Length = 150

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 24/90 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-------PTG--------------- 258
           + I  ++      R+SG GGQ+VNTTDS V +          P G               
Sbjct: 16  VLIPAAELHWRFSRSSGPGGQNVNTTDSRVELVFDLAASEAFPPGRRARALRRLEPRLVD 75

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYE 286
             VVV   + RSQ +N+  A   L A L E
Sbjct: 76  GSVVVAASEHRSQWRNRVAAQRRLVALLQE 105


>gi|56421346|ref|YP_148664.1| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate
           mutase [Geobacillus kaustophilus HTA426]
 gi|56381188|dbj|BAD77096.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; chorismate
           mutase [Geobacillus kaustophilus HTA426]
          Length = 360

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71
            D    R+  +N +               L+ ER  L   I  IKE Q     + +    
Sbjct: 6   LDELRARVDEINLQLL------------KLINERGRLVQEIGKIKEAQGTHRYDPVRERK 53

Query: 72  LLELALEEDD----CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGA 125
           +L+L  E +D     S LQ     + +  LE++        L+S +    +  +EV    
Sbjct: 54  MLDLISEHNDGPFETSTLQHIFKEIFKAALELQEDDHRKALLVSRKKHPENTIVEVKGER 113

Query: 126 GGTESQDWA 134
            G  +Q + 
Sbjct: 114 IGDGNQYFV 122


>gi|74025566|ref|XP_829349.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70834735|gb|EAN80237.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 1299

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 18/125 (14%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----- 56
            +L +QL+ + G     +  + L  L  +  D     +   +  L +E + L   +     
Sbjct: 953  ELRKQLSDVAGS--KSSLEKELKELRKQLSD---VADSKSS--LEKELKELRKQLSDVAG 1005

Query: 57   ------SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
                    +KE++ +L D         +E D    Q +     +  LE E K+     S 
Sbjct: 1006 SKSSLEKELKELRKQLSDVADSKSSLEKEPDELRKQLSDVAGSKSSLEKELKELRKQPSD 1065

Query: 111  EADSN 115
             ADS 
Sbjct: 1066 VADSK 1070


>gi|260663173|ref|ZP_05864065.1| ABC transporter ATP-binding component [Lactobacillus fermentum
           28-3-CHN]
 gi|260552365|gb|EEX25416.1| ABC transporter ATP-binding component [Lactobacillus fermentum
           28-3-CHN]
          Length = 647

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R +  L    +     ++   + T+  DP +  ++ +   L +E   L   +  ++E
Sbjct: 576 KLQRTVADLEEQMN--QLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633


>gi|224371795|ref|YP_002605959.1| hypothetical protein HRM2_47460 [Desulfobacterium autotrophicum
           HRM2]
 gi|223694512|gb|ACN17795.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 140

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---------------------- 255
           S +I I +++  +   RA GAGGQ+VN   SA+ +                         
Sbjct: 5   SNKITIPDAEIEMTAVRAQGAGGQNVNKVSSAIHLRFNIRASSLPEYYKEKLLGLNDQRI 64

Query: 256 -PTGVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
              GVV ++ Q+ RSQ  N+  A   L A +++  +  ++       +       G + R
Sbjct: 65  TNDGVVIIKSQEHRSQEMNREAALARLVALIHQCMVTPKKRRKTRPTA-------GSKRR 117

Query: 314 SYVLQPYQ-MVKDLRTNIEKTSP 335
               +  +  +K LR  I     
Sbjct: 118 RLEGKTQRAQLKKLRGKIRTRDL 140


>gi|261418173|ref|YP_003251855.1| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate
           mutase [Geobacillus sp. Y412MC61]
 gi|297529030|ref|YP_003670305.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Geobacillus sp.
           C56-T3]
 gi|319767867|ref|YP_004133368.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Geobacillus sp.
           Y412MC52]
 gi|261374630|gb|ACX77373.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Geobacillus sp.
           Y412MC61]
 gi|297252282|gb|ADI25728.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Geobacillus sp.
           C56-T3]
 gi|317112733|gb|ADU95225.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Geobacillus sp.
           Y412MC52]
          Length = 360

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71
            D    R+  +N +               L+ ER  L   I  IKE Q     + +    
Sbjct: 6   LDELRARVDEINLQLL------------KLINERGRLVQEIGKIKEAQGTHRYDPVRERK 53

Query: 72  LLELALEEDD----CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGA 125
           +L+L  E +D     S LQ     + +  LE++        L+S +    +  +EV    
Sbjct: 54  MLDLISEHNDGPFETSTLQHIFKEIFKAALELQEDDHRKALLVSRKKHPENTIVEVKGER 113

Query: 126 GGTESQDWA 134
            G  +Q + 
Sbjct: 114 IGDGNQYFV 122


>gi|196015030|ref|XP_002117373.1| hypothetical protein TRIADDRAFT_61380 [Trichoplax adhaerens]
 gi|190580126|gb|EDV20212.1| hypothetical protein TRIADDRAFT_61380 [Trichoplax adhaerens]
          Length = 2526

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 52/155 (33%), Gaps = 15/155 (9%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLN---TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
             +L  L   FD    + R  ++        D      +   +   ++ + +   ++  +
Sbjct: 391 QERLEQLATSFDRKARL-RFQWITDNLRLISDEDFGSTLTAVEASKKKHEAIVADVTTYQ 449

Query: 61  EIQDRLCDNLILLELA----------LEEDDCSILQETSDNLQRIKLEVE-YKQFESLLS 109
                L D    LE              +D     +E  + L+  + +++ + Q + LLS
Sbjct: 450 RRVQALNDLHGELERENYHEIQRITEKRDDVFETWKELLEALKYRRSKLDLHIQLQILLS 509

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             +   ++  E+ AG    +       +  +  ++
Sbjct: 510 KISSWKNSIAEIKAGFQSEDCGRELADVTNLLQQY 544


>gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2075

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 13/94 (13%)

Query: 10   LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKM---LMRERQHLDNAISFIKEIQDR 65
            +    D  D   ++L   N K     + QN    +    L +E + L + IS I++I+  
Sbjct: 1906 IDNSLDELDGINKKLEEQNNKL----IAQNNKLNEKRGDLSKELKELKDKISVIEKIKMN 1961

Query: 66   LCDNLIL--LELALEE---DDCSILQETSDNLQR 94
              D   L    L + E       +L+     L  
Sbjct: 1962 EDDLYTLDGYRLGIHELTKSQEEMLKNIVRELNE 1995


>gi|332025000|gb|EGI65187.1| General vesicular transport factor p115 [Acromyrmex echinatior]
          Length = 1386

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 29/157 (18%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FI 59
           + L ++L     +    +   RL+      +         E     +E   L++ +   I
Sbjct: 731 VDLEKELQMYKTM--VADLENRLAEYTHIMQQ------HNEKDKENKE-SDLESQLKLKI 781

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--- 116
            E++    D   LLEL  ++D  S +    + L  +  ++E  +     SGE D++D   
Sbjct: 782 DELEKLKKDQEALLELLTDQD--SKITLYKERLIELGDKIESDES----SGELDTDDQPE 835

Query: 117 ---AYLEVHAG---AGGTESQDWANM----LLRMYTR 143
              A +   +G    GG  +          L R +T 
Sbjct: 836 SKRARIIFQSGRAKPGGVIAAHVCWERPSVLTRRFTM 872


>gi|311992638|ref|YP_004009506.1| hypothetical protein Ac42p144 [Acinetobacter phage Ac42]
 gi|298684421|gb|ADI96382.1| hypothetical protein Ac42p144 [Acinetobacter phage Ac42]
          Length = 64

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           I   D  I+++R    G  ++N     VRITH P+G V +  ++RS H N+A A+ +LR
Sbjct: 2   IKAEDLLIESFRTESQG-HYLNAYPKGVRITHKPSGKVFESSEQRSPHLNRAVAFKLLR 59


>gi|302665658|ref|XP_003024438.1| hypothetical protein TRV_01401 [Trichophyton verrucosum HKI 0517]
 gi|291188491|gb|EFE43827.1| hypothetical protein TRV_01401 [Trichophyton verrucosum HKI 0517]
          Length = 866

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 26/149 (17%)

Query: 1   MKLSRQLNCLGGLFDWD--NAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           ++  +    L G  D +     +R +FL  + E       +    A+ L +E   L   I
Sbjct: 457 LEAWQDFINLKGRMDTELTKVTKRNNFLVEELETWKQQFLKFQKFAEQLTKETSELKVKI 516

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D++I L L       + DD          I +E     +R +
Sbjct: 517 ETHKRESRRLTSLIDQQKDDIIRLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNE 576

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHA 123
            E+   Q    +LL    D+    + + +
Sbjct: 577 KEIAALQHTNSNLLRQRDDAQRVVIHLRS 605


>gi|159110869|ref|XP_001705674.1| Hypothetical protein GL50803_41258 [Giardia lamblia ATCC 50803]
 gi|157433762|gb|EDO78000.1| hypothetical protein GL50803_41258 [Giardia lamblia ATCC 50803]
          Length = 1917

 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPH--LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D   QR+  L  +  +    + +   E   L+ +   L  A   +      L + +  L
Sbjct: 132 IDELNQRIEELLRRIAEQDDTIVEQQKEIADLLDQLASLKKAYDGLDSDHLALQNTVDTL 191

Query: 74  ELALEE---DDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   E   ++  + ++ +D L+R         +  + +  G++D N + ++++
Sbjct: 192 NMEKGESAAENEKLKRQIADLLKRVAAAEAERDRYKQQITKGDSDRNISLVDIN 245


>gi|47095782|ref|ZP_00233387.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           1/2a F6854]
 gi|224498481|ref|ZP_03666830.1| hypothetical protein LmonF1_01814 [Listeria monocytogenes Finland
           1988]
 gi|254899229|ref|ZP_05259153.1| hypothetical protein LmonJ_05434 [Listeria monocytogenes J0161]
 gi|254912630|ref|ZP_05262642.1| ABC transporter [Listeria monocytogenes J2818]
 gi|254936957|ref|ZP_05268654.1| ABC transporter [Listeria monocytogenes F6900]
 gi|47015786|gb|EAL06714.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           1/2a F6854]
 gi|258609559|gb|EEW22167.1| ABC transporter [Listeria monocytogenes F6900]
 gi|293590624|gb|EFF98958.1| ABC transporter [Listeria monocytogenes J2818]
          Length = 650

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  ++  + +E   +    +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKSLEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|242371717|ref|ZP_04817291.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis M23864:W1]
 gi|242350577|gb|EES42178.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis M23864:W1]
          Length = 643

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAIS 57
           K+ RQ+         +     +S++  +   P ++ + I+A  L  E+      L+  + 
Sbjct: 577 KIERQIEQCEA--KIEAFETHISYIEEQLTQPEVFNDPIKAAELAEEKNETEQKLEQVMF 634

Query: 58  FIKEIQDRL 66
             +E+Q++L
Sbjct: 635 EWEELQEKL 643


>gi|312370897|gb|EFR19200.1| hypothetical protein AND_22908 [Anopheles darlingi]
          Length = 1559

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 27/129 (20%)

Query: 3    LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQ--NVIEA------KMLMRERQHLD 53
            L  Q+  +    D  +   ++  LN +      L    N  +       +    E Q  +
Sbjct: 1300 LELQIQKIEQ--DKASKDHQIRNLNDEIAHQDELINKLNKEKKMQGEVNQKTAEELQAAE 1357

Query: 54   NAISFIKEIQDRLCDNLILLELALE----------------EDDCSILQETSDNLQRIKL 97
            + ++ + +++ +L   L  LE +LE                E D  + QE   +L+R K 
Sbjct: 1358 DKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKAKRKVEGDLKLTQEAVADLERNKK 1417

Query: 98   EVEYKQFES 106
            E+E      
Sbjct: 1418 ELEQTVLRK 1426


>gi|282921758|ref|ZP_06329475.1| phage major capsid protein [Staphylococcus aureus A9765]
 gi|282594020|gb|EFB99009.1| phage major capsid protein [Staphylococcus aureus A9765]
          Length = 402

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +D+ + +K + E+ +   L + 
Sbjct: 71  VERQVQDIEE-KEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNE 118


>gi|154250435|ref|YP_001411260.1| 3D domain-containing protein [Fervidobacterium nodosum Rt17-B1]
 gi|154154371|gb|ABS61603.1| 3D domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 526

 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 15/113 (13%)

Query: 3   LSRQLNCLGG--LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           L ++L+      + D     +R++ L           N      L      L   I  IK
Sbjct: 149 LDKRLSNFENKTVSDISTLSKRVTTLEN--------NNSSINTKLFSIENQLK-VIDNIK 199

Query: 61  E----IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
           +    +  ++ +   L +L++++ D   +++    +Q +K  ++    E LL 
Sbjct: 200 KDLDVLSAQIRELKSLSQLSIQQSDIEFIKQLQQEIQDLKSTIQSMSIEELLK 252


>gi|254584718|ref|XP_002497927.1| ZYRO0F16698p [Zygosaccharomyces rouxii]
 gi|186929055|emb|CAQ43380.1| Rab guanine nucleotide exchange factor SEC2 [Zygosaccharomyces
           rouxii]
 gi|238940820|emb|CAR28994.1| ZYRO0F16698p [Zygosaccharomyces rouxii]
          Length = 779

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 13/111 (11%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G + +++   +  + L  +           +A+        L   +   KE +     N 
Sbjct: 50  GAMQEYEKLKKNFAELEKRES-------NKDAQ-----LNKLREELRKQKEARTEADSNA 97

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLE 120
             L   +EE   S+  E ++ +   +      +  +  L  +    DA LE
Sbjct: 98  DKLNHEVEELTASLFDEANNMVADARKASHATELRNAKLVEQLHERDALLE 148


>gi|83591437|ref|YP_425189.1| class I peptide chain release factor [Rhodospirillum rubrum ATCC
           11170]
 gi|83574351|gb|ABC20902.1| Class I peptide chain release factor [Rhodospirillum rubrum ATCC
           11170]
          Length = 140

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 32/119 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---------------------- 258
           I + +++      R+SG GGQ+VN   +AV++     G                      
Sbjct: 8   IALDDAEIEERFIRSSGPGGQNVNKVSTAVQLRFDVAGSPNLPGWVKHRLSVLAGSRLTG 67

Query: 259 ---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
              +V+  Q +R+Q  N+ +A   L A +       +           T    G Q R 
Sbjct: 68  EGVLVLTAQSQRTQEANRREAVERLVALI-------QAACHRDKPRRPTRPTKGSQTRR 119


>gi|326934596|ref|XP_003213374.1| PREDICTED: epidermal growth factor receptor substrate 15-like
           1-like [Meleagris gallopavo]
          Length = 933

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D     L  L  + +D            + +++  L + ++ +++        +  L+
Sbjct: 450 DLDRETSNLQELEAQKQDA-----QDRLDEMDQQKAKLKDMLNDVRQKCQEETQVISSLK 504

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           + ++  +  +  +  D+L R K E+   Q E
Sbjct: 505 MQIQSQESDLKSQ-EDDLNRAKAELNRLQQE 534


>gi|283780748|ref|YP_003371503.1| peptide chain release factor I [Pirellula staleyi DSM 6068]
 gi|283439201|gb|ADB17643.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068]
          Length = 139

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 39/122 (31%), Gaps = 32/122 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT-------------------- 257
           S +I I +++      RA G GGQ+VN   S   +    T                    
Sbjct: 5   SSKITIPDAELHFTYSRAGGPGGQNVNKVSSKATMHFDVTASPSIPDDVKQRFLTTFKSR 64

Query: 258 -----GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
                 VV+  Q+ R Q +N       L+  L  +    R+  A            G Q+
Sbjct: 65  LTTEGQVVIHSQEHRDQPRNAEACEQKLKEMLLAVLTPPRKRRATKPT-------RGSQV 117

Query: 313 RS 314
           R 
Sbjct: 118 RR 119


>gi|222630149|gb|EEE62281.1| hypothetical protein OsJ_17069 [Oryza sativa Japonica Group]
          Length = 720

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--A 76
            VQR   L     D   W +  + + +M+  + L      +  ++    +   L E    
Sbjct: 390 LVQRQKELQAHMRD---WTDWAQ-QKVMQVTRRLAKEKEELHSLRKEKEEADRLQEERHN 445

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ 103
           LEE     L E    + R   ++E  +
Sbjct: 446 LEESTRKKLLEMESAISRANTQLEKAE 472


>gi|326473018|gb|EGD97027.1| DENN domain-containing protein [Trichophyton tonsurans CBS 112818]
 gi|326477283|gb|EGE01293.1| DENN domain-containing protein [Trichophyton equinum CBS 127.97]
          Length = 917

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 26/149 (17%)

Query: 1   MKLSRQLNCLGGLFDWD--NAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           ++  +    L G  D +     +R +FL  + E       +    A+ L +E   L   I
Sbjct: 508 LEAWQDFINLKGRMDTELTKVTKRNNFLVEELETWKQQFLKFQKFAEQLTKETSELKVKI 567

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D++I L L       + DD          I +E     +R +
Sbjct: 568 ETHKRESRRLTSLIDQQKDDIIRLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNE 627

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHA 123
            E+   Q    +LL    D+    + + +
Sbjct: 628 KEIASLQHTNSNLLRQRDDAQRVVIHLRS 656


>gi|302506471|ref|XP_003015192.1| hypothetical protein ARB_06315 [Arthroderma benhamiae CBS 112371]
 gi|291178764|gb|EFE34552.1| hypothetical protein ARB_06315 [Arthroderma benhamiae CBS 112371]
          Length = 866

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 26/149 (17%)

Query: 1   MKLSRQLNCLGGLFDWD--NAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           ++  +    L G  D +     +R +FL  + E       +    A+ L +E   L   I
Sbjct: 457 LEAWQDFINLKGRMDTELTKVTKRNNFLVEELETWKQQFLKFQKFAEQLTKETSELKVKI 516

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D++I L L       + DD          I +E     +R +
Sbjct: 517 ETHKRESRRLTSLIDQQKDDIIRLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNE 576

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHA 123
            E+   Q    +LL    D+    + + +
Sbjct: 577 KEIASLQHTNSNLLRQRDDAQRVVIHLRS 605


>gi|253699344|ref|YP_003020533.1| ABC transporter [Geobacter sp. M21]
 gi|251774194|gb|ACT16775.1| ABC transporter related protein [Geobacter sp. M21]
          Length = 648

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 6/51 (11%), Positives = 14/51 (27%), Gaps = 1/51 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65
                  L+ L      P  + +   A++       L +   S  +  +  
Sbjct: 598 IATKEGELAELEQAMAKPDFFSDHEAARIAGERHAQLTEEIASLYQAWEAA 648


>gi|85717172|ref|ZP_01048130.1| hypothetical protein NB311A_14622 [Nitrobacter sp. Nb-311A]
 gi|85696005|gb|EAQ33905.1| hypothetical protein NB311A_14622 [Nitrobacter sp. Nb-311A]
          Length = 139

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 1/94 (1%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I I E+D  I   RASG GGQ+VN   +A ++ +    + +         +   Q     
Sbjct: 8   IVIDENDVEISFVRASGPGGQNVNKLSTAAQLRYDTRRLALAPDVAARLAQLAGQRMTRD 67

Query: 281 RAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
              +   +  + +E           E+     IR
Sbjct: 68  GVIVIHAQRFRTQERNRADATDRLIELLRQAAIR 101


>gi|327304743|ref|XP_003237063.1| DENN domain-containing protein [Trichophyton rubrum CBS 118892]
 gi|326460061|gb|EGD85514.1| DENN domain-containing protein [Trichophyton rubrum CBS 118892]
          Length = 917

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 26/149 (17%)

Query: 1   MKLSRQLNCLGGLFDWD--NAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           ++  +    L G  D +     +R +FL  + E       +    A+ L +E   L   I
Sbjct: 508 LEAWQDFINLKGRMDTELTKVTKRNNFLVEELETWKQQFLKFQKFAEQLTKETSELKVKI 567

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D++I L L       + DD          I +E     +R +
Sbjct: 568 ETHKRESRRLTSLIDQQKDDIIRLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNE 627

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHA 123
            E+   Q    +LL    D+    + + +
Sbjct: 628 KEIASLQHTNSNLLRQRDDAQRVVIHLRS 656


>gi|298505048|gb|ADI83771.1| ABC transporter, ATP-binding protein [Geobacter sulfurreducens
           KN400]
          Length = 645

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQ 63
           ++L  L            L+ L  +  DP  + +  +A+    E   L   I+   +E +
Sbjct: 583 KRLEELESA--IAAEEGHLAALEGRMADPAFFDDHEQARRGGEEHAMLTARIATLYEEWE 640

Query: 64  D 64
            
Sbjct: 641 S 641


>gi|118616025|ref|YP_904357.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
           ulcerans Agy99]
 gi|118568135|gb|ABL02886.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
           ulcerans Agy99]
          Length = 848

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D +  RL  L  +  D        E   L    Q+  N+I  ++E++++L       E A
Sbjct: 436 DASKDRLEKLRAELAD-----KKEELAELTTRWQNEKNSIEIVRELKEQLDALRGESERA 490

Query: 77  LEEDDCSILQETS-----DNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAG--- 126
             + D +   E       +  +++   V + Q   + +L  E   +D    V A  G   
Sbjct: 491 ERDGDLAKAAELRYGRIPEMEKKLDAAVPHAQAREQVMLKEEVGPDDIAEVVSAWTGIPA 550

Query: 127 GTESQDWANMLLRMY 141
           G   +     LLRM 
Sbjct: 551 GRMLEGETAKLLRME 565


>gi|16763630|ref|NP_459245.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62178810|ref|YP_215227.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161612615|ref|YP_001586580.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553345|ref|ZP_02347094.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167990129|ref|ZP_02571229.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230551|ref|ZP_02655609.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168235022|ref|ZP_02660080.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168245010|ref|ZP_02669942.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264649|ref|ZP_02686622.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168464194|ref|ZP_02698097.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446732|ref|YP_002039480.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450266|ref|YP_002044230.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194471764|ref|ZP_03077748.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736606|ref|YP_002113263.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197251225|ref|YP_002145245.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197263410|ref|ZP_03163484.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198243513|ref|YP_002214201.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388576|ref|ZP_03215188.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207855758|ref|YP_002242409.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224582087|ref|YP_002635885.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238911306|ref|ZP_04655143.1| hypothetical protein SentesTe_09240 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16418746|gb|AAL19204.1| putative-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62126443|gb|AAX64146.1| putative-tRNA hydrolase domain [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161361979|gb|ABX65747.1| hypothetical protein SPAB_00306 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405395|gb|ACF65617.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408570|gb|ACF68789.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194458128|gb|EDX46967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194712108|gb|ACF91329.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195632557|gb|EDX51011.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197214928|gb|ACH52325.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197241665|gb|EDY24285.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197292024|gb|EDY31374.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197938029|gb|ACH75362.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199605674|gb|EDZ04219.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205322185|gb|EDZ10024.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205331555|gb|EDZ18319.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334913|gb|EDZ21677.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205336203|gb|EDZ22967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205346929|gb|EDZ33560.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206707561|emb|CAR31835.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224466614|gb|ACN44444.1| hypothetical protein SPC_0256 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245472|emb|CBG23262.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267991931|gb|ACY86816.1| hypothetical protein STM14_0282 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301156867|emb|CBW16343.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911210|dbj|BAJ35184.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225173|gb|EFX50233.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713264|gb|EFZ04835.1| Class I peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323128560|gb|ADX15990.1| Uncharacterized protein yaeJ [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326621944|gb|EGE28289.1| Class I peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|332987192|gb|AEF06175.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 140

 Score = 38.4 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A     +  E     +
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSK 122


>gi|302781226|ref|XP_002972387.1| hypothetical protein SELMODRAFT_97490 [Selaginella moellendorffii]
 gi|300159854|gb|EFJ26473.1| hypothetical protein SELMODRAFT_97490 [Selaginella moellendorffii]
          Length = 839

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 15/125 (12%)

Query: 38  NVIE------AKMLMRERQHLDNAISFIKEIQD----RLCDNLILLELALEEDDCSILQE 87
           +  E      A+ L++ ++ L       +++++    RL +    +E  ++E    + +E
Sbjct: 368 DQKERERLEIAQKLIQRQEDLKALTLRTEKMEEEKVKRLAELQAEMERMMKEKADELRRE 427

Query: 88  TSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
               LQ    +I  E    +   L     D       +H  A   ESQ     L      
Sbjct: 428 MELELQLQVHKICPENGQYRLAELEKVIQDQRQEIAVLHLRAERAESQV-QEFLQASSQA 486

Query: 144 WAEKR 148
           WAE  
Sbjct: 487 WAESN 491


>gi|297559936|ref|YP_003678910.1| class I peptide chain release factor [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844384|gb|ADH66404.1| Class I peptide chain release factor [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 145

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 22/110 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV--------------------RITHIPTGVV 260
           + +          R+SG GGQHVNT+D+ V                    R+     G V
Sbjct: 16  VTVPADALTWRFSRSSGPGGQHVNTSDTRVSLSLDVAACLGGTRRQRALERLRGRLVGDV 75

Query: 261 --VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
             V  Q  RSQ +N+A+A   + A L E       E      S + +   
Sbjct: 76  LTVTVQTHRSQARNRAEARERMAALLEEAIAPPARERRATRPSRRAKQRR 125


>gi|228474487|ref|ZP_04059221.1| ATP-binding ABC transporter protein [Staphylococcus hominis SK119]
 gi|228271571|gb|EEK12931.1| ATP-binding ABC transporter protein [Staphylococcus hominis SK119]
          Length = 645

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRL 66
            +   + ++ ++ +   P ++ + I+A  L  ++    Q L+N ++  +E+Q+++
Sbjct: 591 IEKYEEHITQIDQQLTQPDIFNDPIKANELAEQKLSIEQQLENVMAEWEELQEKI 645


>gi|148693665|gb|EDL25612.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_b
           [Mus musculus]
          Length = 1387

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 18/109 (16%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR-----ERQHLDNAISF 58
             +   LG +   +    R+  L  + ++      +  A  L++     ER  L      
Sbjct: 661 EERAQVLGRV---EQLKIRVKELEQQLQEAAREAEMERA--LLQGEREAERASLQKEQRA 715

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           + ++Q++L    + LE  +++D      + +D L+      E  +F+ L
Sbjct: 716 VDQLQEKL----VALETGIQKD----RDKEADALETETKLFEDLEFQQL 756


>gi|28972329|dbj|BAC65618.1| mKIAA0638 protein [Mus musculus]
          Length = 1386

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 18/109 (16%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR-----ERQHLDNAISF 58
             +   LG +   +    R+  L  + ++      +  A  L++     ER  L      
Sbjct: 660 EERAQVLGRV---EQLKIRVKELEQQLQEAAREAEMERA--LLQGEREAERASLQKEQRA 714

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           + ++Q++L    + LE  +++D      + +D L+      E  +F+ L
Sbjct: 715 VDQLQEKL----VALETGIQKD----RDKEADALETETKLFEDLEFQQL 755


>gi|317047005|ref|YP_004114653.1| Class I peptide chain release factor [Pantoea sp. At-9b]
 gi|316948622|gb|ADU68097.1| Class I peptide chain release factor [Pantoea sp. At-9b]
          Length = 136

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + + E++  +   RA GAGGQHVN T +A+ +                      H+ T  
Sbjct: 8   VSLPENEVELSAIRAQGAGGQHVNKTSTAIHLRFDINASSLPPFYKERLLGARHHLITED 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             V+++ Q+ RSQ  N+  A   L   + EL   ++   A
Sbjct: 68  GVVIIKAQEYRSQEMNREAALQRLINLIRELTTVEKVRRA 107


>gi|16759231|ref|NP_454848.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140780|ref|NP_804122.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213028871|ref|ZP_03343318.1| hypothetical protein Salmonelentericaenterica_44358 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
 gi|213161619|ref|ZP_03347329.1| hypothetical protein Salmoneentericaenterica_17067 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213423698|ref|ZP_03356678.1| hypothetical protein Salmonentericaenterica_40183 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213428150|ref|ZP_03360900.1| hypothetical protein SentesTyphi_22790 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213584325|ref|ZP_03366151.1| hypothetical protein SentesTyph_25140 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213646231|ref|ZP_03376284.1| hypothetical protein SentesTy_02100 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213850219|ref|ZP_03381117.1| hypothetical protein SentesT_00953 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289830086|ref|ZP_06547526.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25369510|pir||AC0532 probable release factor STY0265 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16501522|emb|CAD08699.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136404|gb|AAO67971.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 140

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A     +  E     +
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSK 122


>gi|255007974|ref|ZP_05280100.1| endopeptidase Clp ATP-binding chain B [Bacteroides fragilis 3_1_12]
 gi|313145690|ref|ZP_07807883.1| chaperone clpB [Bacteroides fragilis 3_1_12]
 gi|313134457|gb|EFR51817.1| chaperone clpB [Bacteroides fragilis 3_1_12]
          Length = 862

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-------IQDRLCD 68
            D   +++  L  + E      +  + + + +E   L       K        + D +  
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDEPKLQTIGKELAELKEQEKSYKAKWQSEKSLMDIIQQ 469

Query: 69  NLILLELALEEDDCSI---------------LQETSDNLQRIKLEVEYKQFES-LLSGEA 112
           N + +E    E D +                LQE +  ++  + ++   Q ++ ++  E 
Sbjct: 470 NKVEIENLKFEADKAEREGNYGKVAEIRYGKLQELNKEIEDTQKKLHEMQGDTAMIKEEV 529

Query: 113 DSNDA 117
           D+ D 
Sbjct: 530 DAEDI 534


>gi|183980670|ref|YP_001848961.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
           marinum M]
 gi|183173996|gb|ACC39106.1| endopeptidase ATP binding protein (chain B) ClpB [Mycobacterium
           marinum M]
          Length = 848

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D +  RL  L  +  D        E   L    Q+  N+I  ++E++++L       E A
Sbjct: 436 DASKDRLEKLRAELAD-----KKEELAELTTRWQNEKNSIEIVRELKEQLDALRGESERA 490

Query: 77  LEEDDCSILQETS-----DNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAG--- 126
             + D +   E       +  +++   V + Q   + +L  E   +D    V A  G   
Sbjct: 491 ERDGDLAKAAELRYGRIPEMEKKLDAAVPHAQAREQVMLKEEVGPDDIAEVVSAWTGIPA 550

Query: 127 GTESQDWANMLLRMY 141
           G   +     LLRM 
Sbjct: 551 GRMLEGETAKLLRME 565


>gi|86751284|ref|YP_487780.1| peptidyl-tRNA hydrolase domain protein [Rhodopseudomonas palustris
           HaA2]
 gi|86574312|gb|ABD08869.1| Class I peptide chain release factor [Rhodopseudomonas palustris
           HaA2]
          Length = 139

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 32/132 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------------ 258
           I + D  I   RASG GGQ+VN   +A ++    T                         
Sbjct: 10  IDDDDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKIALPEDAALRLINLAGQRMTKEGV 69

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V+  Q+ R+Q +NKA A + L   L       R  +        T    G + R    +
Sbjct: 70  IVIHAQRFRTQERNKADAIDRLLELL-------RAAMVRPIPRRATRPTLGSKKRRLEGK 122

Query: 319 PYQ-MVKDLRTN 329
            ++  +K  R+ 
Sbjct: 123 KHRGDIKAGRSG 134


>gi|13476570|ref|NP_108140.1| ABC transporter, ATP-binding component [Mesorhizobium loti
           MAFF303099]
 gi|14027332|dbj|BAB53601.1| ABC transporter, ATP-binding component [Mesorhizobium loti
           MAFF303099]
          Length = 625

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKE 61
           L++++     L D     +R+  +  +  +P +++ +   A  L +ER  L   ++  +E
Sbjct: 553 LAKEIRATEALMD--RIRKRIDGIEDELANPAIYEKDPSTATRLAKERSQLAQTLAGHEE 610


>gi|314935996|ref|ZP_07843345.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655813|gb|EFS19556.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp.
           hominis C80]
          Length = 645

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRL 66
            +   + ++ ++ +   P ++ + I+A  L  ++    Q L+N ++  +E+Q+++
Sbjct: 591 IEKYEEHITQIDQQLTQPDIFNDPIKANELAEQKLSIEQQLENVMAEWEELQEKI 645


>gi|296167815|ref|ZP_06850001.1| chaperone protein ClpB [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897045|gb|EFG76665.1| chaperone protein ClpB [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 848

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + +RL  L ++  D        +   L    Q+  +AI  ++E++++L       E A
Sbjct: 436 EASKERLEKLRSELADQK-----EKLAELTTRWQNEKSAIDVVRELKEQLEALRGESERA 490

Query: 77  LEEDDCSILQETS-DNLQRIKLEVE------YKQFESLLSGEADSNDAYLEVHAGAG--- 126
             + D +   E     +  ++ +++        +   +L  E   +D    V A  G   
Sbjct: 491 ERDGDLAKAAELRYGRIPEVEKKLDAALPHAEARENVMLKEEVGPDDIAEVVSAWTGIPA 550

Query: 127 GTESQDWANMLLRMY 141
           G   +     LLRM 
Sbjct: 551 GRMLEGETAKLLRME 565


>gi|258597271|ref|XP_001347853.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
 gi|254832637|gb|AAN35766.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
          Length = 153

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 25/121 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------HIP----------------- 256
            EI  +  +  T R+SG GGQ VN  ++ V+I         IP                 
Sbjct: 12  FEIPFNQIQKITARSSGPGGQSVNKAETKVQIRFNVDDAKWIPLNVKENLKKIYKNKLSK 71

Query: 257 -TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
              ++++ ++  SQ  N     + L+  L E E  K +      +     I    QI+ Y
Sbjct: 72  NNDLIIESEETSSQISNYKICADKLKHILEEAENYKEKIKHTCIKDFIHLIKSDEQIKKY 131

Query: 316 V 316
            
Sbjct: 132 K 132


>gi|112253526|gb|ABI14350.1| unknown [Pfiesteria piscicida]
          Length = 659

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW        L   ++HL N +S  + +  R+   +  L+ A E  D + ++E    +++
Sbjct: 20  LWN--AALGALETAQKHLANTVSNEESVAARIKFAMEDLKKARETGDEAKVKEAKAEVEK 77

Query: 95  IKLEVEYKQFE 105
            K EVE  + E
Sbjct: 78  AKAEVEKAKAE 88


>gi|115615251|ref|XP_798120.2| PREDICTED: similar to CG6179-PA [Strongylocentrotus purpuratus]
 gi|115925599|ref|XP_001194610.1| PREDICTED: similar to CG6179-PA [Strongylocentrotus purpuratus]
          Length = 2278

 Score = 38.4 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 44/111 (39%), Gaps = 12/111 (10%)

Query: 1    MKLSRQLNCLGGLFDWDNAVQRLS-----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
            ++ SR++     + D +  +++L       L  K +   L+    + + +      L + 
Sbjct: 1239 IEFSRRMEEEKLVHDLEEELRQLETAEDVELQEKLDQ--LYDLDKKLQEISARVSVLKDE 1296

Query: 56   ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
               I+    RL       ++  + DD  ++ +  +  ++++ ++   + + 
Sbjct: 1297 KDKIENTLQRLD-----QQIIHDWDDKEMVAKIEEQQRQLERQLTRVRLQL 1342


>gi|307946015|ref|ZP_07661350.1| holdfast attachment protein C [Roseibium sp. TrichSKD4]
 gi|307769679|gb|EFO28905.1| holdfast attachment protein C [Roseibium sp. TrichSKD4]
          Length = 605

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +    +L  L  +  DP+L+  N  +   L          I+ + E +  L +  + LE
Sbjct: 545 IEALEAKLEKLQAEMNDPNLYAKNPDKFAKLS-------AQITDVTEQKGALEEQWLELE 597

Query: 75  LALEE 79
           +  EE
Sbjct: 598 MLNEE 602


>gi|258445569|ref|ZP_05693751.1| bacteriophage capsid protein [Staphylococcus aureus A6300]
 gi|257855616|gb|EEV78549.1| bacteriophage capsid protein [Staphylococcus aureus A6300]
          Length = 402

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIGQ-----QLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ D     E A  +D     Q  +D+ + +K + E+ +   L + 
Sbjct: 71  VERQVQDIEE-KEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNE 118


>gi|227834132|ref|YP_002835839.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262183381|ref|ZP_06042802.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227455148|gb|ACP33901.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 853

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 17/134 (12%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL+ L  +  D        +   L     +   AI  ++ I+++L D     E+A  +
Sbjct: 440 KDRLTALQQELAD-----EREKLGELKARWANEKKAIDDVQTIKEQLEDLRRQAEIAERD 494

Query: 80  DDCSILQET--------SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG---GT 128
            D ++  E           +L   + + +  Q  ++LS E   +     V A  G   G 
Sbjct: 495 GDLALASEINYGKMPPLEKDLAAAEEKAQQ-QHNTMLSEEVTPDTIAEVVSAWTGIPAGK 553

Query: 129 ESQDWANMLLRMYT 142
             Q     LL M +
Sbjct: 554 MLQGETEKLLNMES 567


>gi|291457981|ref|ZP_06597371.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291419313|gb|EFE93032.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 326

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           EA  L  ER+ +  A    + I     + + LLE   EE+D   + E S+ L+ +     
Sbjct: 258 EAYKLT-EREGIGRAYERFRGIARSWSELIALLEKVAEEEDRRDILEASERLKELSERER 316

Query: 101 YKQFESLLSGE 111
               + LL+G+
Sbjct: 317 EA-MQLLLAGD 326


>gi|291166817|gb|EFE28863.1| ABC transporter, ATP-binding protein [Filifactor alocis ATCC 35896]
          Length = 643

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           +L +Q+  L          +++  L+ +     ++ N  EA  + +E+      L+  + 
Sbjct: 572 QLKKQIQTLEET--IMQLEEKIEQLDLELCKEEVYSNPSEAMRVQKEKENASSSLEQTML 629

Query: 58  FIKEIQDRLCDNLI 71
             +E+ + L +   
Sbjct: 630 EWEELHETLEEMDE 643


>gi|320167376|gb|EFW44275.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1156

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 7/100 (7%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   L  + ED    +   + + L RE   +       ++ + R  D     +LA EE+
Sbjct: 341 RRKEELLRQKED---AKRQKDEQKLQREL-EVQKKNQEREDAKKRKEDEKRQKDLAKEEE 396

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYL 119
              + +E +   Q  +         +L    EAD  +  L
Sbjct: 397 --RVRKEAAKAQQEAERAKRIADEAALKAKREADKENKRL 434


>gi|319941613|ref|ZP_08015937.1| hypothetical protein HMPREF9464_01156 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804843|gb|EFW01697.1| hypothetical protein HMPREF9464_01156 [Sutterella wadsworthensis
           3_1_45B]
          Length = 646

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNAISFIK 60
           L ++L  +    +     ++L  L+T+  DP  +   +  +    +RE   L   +  ++
Sbjct: 570 LKKELEKVEREMN--ALSEKLKALDTQLADPAFYNGADQGKVAQTLREHGELAPKVEALE 627

Query: 61  ----EIQDRLC 67
               E+ +++ 
Sbjct: 628 MHWLELSEKIE 638


>gi|297813999|ref|XP_002874883.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297320720|gb|EFH51142.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 802

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 47/131 (35%), Gaps = 12/131 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V R+  L  + +D   W N    +  +R  +     +  +++ ++   +     +L  
Sbjct: 460 KLVPRMKDLQKELQDWTDWANQKVKQATVRLLKD-QPELKALRKEKEEAEEFRKEKQLLE 518

Query: 78  E------EDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDAYLEVHAGAGGTES 130
           E       +    L   ++ L+R    +   + E SLL  E ++ +    + A       
Sbjct: 519 ENTMKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAAN----IRAAESAESC 574

Query: 131 QDWANMLLRMY 141
           ++    + R+ 
Sbjct: 575 REAKERVQRLL 585


>gi|242241814|ref|ZP_04796259.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis W23144]
 gi|242234732|gb|EES37043.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis W23144]
          Length = 644

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +    ++S +  +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELESQISHIEEQLTQPEVFNDPLKASKFANQKSETEQKLEQIMLEWEKLQEKL 644


>gi|307195161|gb|EFN77154.1| Immature colon carcinoma transcript 1 protein [Harpegnathos
           saltator]
          Length = 201

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 49/140 (35%), Gaps = 41/140 (29%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI-------THIPTGV---------------- 259
           I  +   I    +SG GGQHVN  ++ V +       T +   +                
Sbjct: 65  IPMNKLDIKYSASSGPGGQHVNRVNTKVDLRFQLSTATWLSEEIRTKLAEQYKNKVNKDG 124

Query: 260 --VVQCQQERSQHKNKAQAWNMLRAKLY-----------ELELQKREEIANIGESSKTEI 306
             V+Q    RSQH N A A   LR  +            E E +KR+ +         E 
Sbjct: 125 YLVIQSDLTRSQHLNLADALEKLREMIRSTLVEPPKPTPESEEKKRKNLLRAARERLHE- 183

Query: 307 GWGRQIRSYVLQPYQMVKDL 326
              ++IRS  ++  + V   
Sbjct: 184 ---KRIRS-QIKQSRRVPHT 199


>gi|227505883|ref|ZP_03935932.1| ATP-dependent protease regulatory subunit, ClpB [Corynebacterium
           striatum ATCC 6940]
 gi|227197511|gb|EEI77559.1| ATP-dependent protease regulatory subunit, ClpB [Corynebacterium
           striatum ATCC 6940]
          Length = 852

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 12/134 (8%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RLS L  +  D        +   L     +   AI  ++  ++ L D     E+A  +
Sbjct: 440 QDRLSKLQQELADE-----REKLGELKARWVNEKKAIDEVQRAKEELEDLKRQAEIAERD 494

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQFE------SLLSGEADSNDAYLEVHAGAGGTESQD 132
            D  +  E     +  ++ +V   +        ++L+ E   +     V A  G    + 
Sbjct: 495 GDYELTSELRYGRIPELEKQVADAEIRANAQSNTMLTEEVTPDTIAEVVSAWTGIPAGKM 554

Query: 133 WANMLLRMYTRWAE 146
                 ++    AE
Sbjct: 555 LQGETQKLLNMEAE 568


>gi|73950386|ref|XP_544404.2| PREDICTED: similar to retinitis pigmentosa GTPase regulator
           interacting protein 1 [Canis familiaris]
          Length = 1322

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 23/138 (16%)

Query: 1   MKLSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNA 55
           ++ S  L+ + G F       +RL     +     L  N  E  M ++E++     L+  
Sbjct: 276 VEKSNALSVMEGKFIQLQEKQRRL-----RISHDALMANGDELNMQLKEQRLKCCSLEKQ 330

Query: 56  I-------SFIKEIQDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLEVEYK 102
           +         I+E+QDR+ D     EL  E  D       S   E    L+  +L+V+  
Sbjct: 331 LHSMTFSERKIEELQDRINDLEKERELLKENYDKLYNSAFSAAHEEQWKLKEQQLKVQIA 390

Query: 103 QFESLLSGEADSNDAYLE 120
           Q E+ L  +       L+
Sbjct: 391 QLETALKSDLTDKTEILD 408


>gi|260469584|ref|ZP_05813749.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259028610|gb|EEW29921.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 625

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKE 61
           L++++     L D     +R+  +  +  +P +++ +   A  L +ER  L   ++  +E
Sbjct: 553 LAKEIRATEALMD--RIRKRIDGIEDELANPAIYEKDPSTATRLAKERSQLAQTLAGHEE 610


>gi|332818061|ref|XP_516758.3| PREDICTED: nephrocystin-3 [Pan troglodytes]
          Length = 1219

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 8   LDTENKRVR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 57

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 58  KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 114

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 115 GTQCEYWTG 123


>gi|227486228|ref|ZP_03916544.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227235859|gb|EEI85874.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 640

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++  +    D +   +++  L  ++     + +      + RE + L++       +
Sbjct: 573 IKNKIKSIEK--DMEEIDKKIKDLTKESLAEGFYDDQARVAEVFREMKDLED-------M 623

Query: 63  QDRLCDNLILLELALEE 79
           +D L +  + L + LEE
Sbjct: 624 RDDLDEEWLNLNMELEE 640


>gi|301785003|ref|XP_002927927.1| PREDICTED: LOW QUALITY PROTEIN: pleckstrin homology-like domain
           family B member 1-like [Ailuropoda melanoleuca]
          Length = 1434

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 46/147 (31%), Gaps = 20/147 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEI 62
             +   LG +   +    R+  L  +            A+    ER  L          +
Sbjct: 775 EERAQVLGRV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAEWALL 823

Query: 63  QDRLCDNLILLE--LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           Q        L E  +ALE        + ++ L+      E  +F+ L        +  L 
Sbjct: 824 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQLERESRVEEEREL- 882

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEK 147
             AG G   SQ     LLR  T+  E+
Sbjct: 883 --AGQGLLRSQ---AELLRSITKRKER 904


>gi|299752443|ref|XP_001830930.2| hypothetical protein CC1G_02381 [Coprinopsis cinerea okayama7#130]
 gi|298409835|gb|EAU90994.2| hypothetical protein CC1G_02381 [Coprinopsis cinerea okayama7#130]
          Length = 520

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 31/84 (36%), Gaps = 9/84 (10%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
           + +  L  + E          A  K +++E+  L++ +  + +      + ++  E    
Sbjct: 218 KEIEELTAELEK-------ERAAKKKIVQEKAALEDELESLSQALFEEANKMVAQERMKL 270

Query: 79  EDDCSILQETSDNLQRIKLEVEYK 102
            +    L+ET    + ++  +   
Sbjct: 271 AETEEELKETRKEKEALQSALRLL 294


>gi|38455422|ref|NP_705765.3| pleckstrin homology-like domain family B member 1 [Mus musculus]
 gi|81892500|sp|Q6PDH0|PHLB1_MOUSE RecName: Full=Pleckstrin homology-like domain family B member 1;
           AltName: Full=Protein LL5-alpha
 gi|35193048|gb|AAH58712.1| Pleckstrin homology-like domain, family B, member 1 [Mus musculus]
          Length = 1371

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 18/109 (16%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR-----ERQHLDNAISF 58
             +   LG +   +    R+  L  + ++      +  A  L++     ER  L      
Sbjct: 723 EERAQVLGRV---EQLKIRVKELEQQLQEAAREAEMERA--LLQGEREAERASLQKEQRA 777

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           + ++Q++L    + LE  +++D      + +D L+      E  +F+ L
Sbjct: 778 VDQLQEKL----VALETGIQKD----RDKEADALETETKLFEDLEFQQL 818


>gi|126175673|ref|YP_001051822.1| ABC transporter-like protein [Shewanella baltica OS155]
 gi|304411093|ref|ZP_07392709.1| ABC transporter related protein [Shewanella baltica OS183]
 gi|307301784|ref|ZP_07581542.1| ABC transporter related protein [Shewanella baltica BA175]
 gi|125998878|gb|ABN62953.1| ABC transporter related [Shewanella baltica OS155]
 gi|304350628|gb|EFM15030.1| ABC transporter related protein [Shewanella baltica OS183]
 gi|306913822|gb|EFN44243.1| ABC transporter related protein [Shewanella baltica BA175]
          Length = 637

 Score = 38.4 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 9/74 (12%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +RL+ L     D  L+    +AK        L + ++    +   L D+  +  L L
Sbjct: 572 KLSERLAELEHLLADSELYDQDNKAK--------LTSVLTERTSLTQTLEDS-EMQWLEL 622

Query: 78  EEDDCSILQETSDN 91
           +E+  ++ QE  + 
Sbjct: 623 QEEIDAMEQEVMEQ 636


>gi|302345323|ref|YP_003813676.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           ATCC 25845]
 gi|302149089|gb|ADK95351.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           ATCC 25845]
          Length = 862

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-------IQDRLCD 68
            D   +RL  L  + E      +  +   L +E   L       +        + +++  
Sbjct: 410 LDEISRRLKQLEIEREAIKRENDTEKIAQLDKEIAELKEQEHGFRAKWEGERGLVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG- 127
           +   +E    E D     E   N +R+  E+ Y + + L   E D  +   ++ A   G 
Sbjct: 470 DKQEIEQLKYEAD---RAEREGNYERV-AEIRYSRLKQL---EDDIKNIQQQLQATQDGQ 522

Query: 128 --TESQDWANMLLRMYTRW 144
                +  A+ +  + +RW
Sbjct: 523 AMVREEVTADDIAEVVSRW 541


>gi|119484150|ref|XP_001261978.1| hypothetical protein NFIA_097030 [Neosartorya fischeri NRRL 181]
 gi|119410134|gb|EAW20081.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
          Length = 1143

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 33/100 (33%), Gaps = 10/100 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL   +N L    +  N  ++   +     +          + L++ +  L+  I+    
Sbjct: 560 KLKNTINELR--MELGNLEEKRKDIEESLAEAEKSN-----QELLQTKSELEGQIA---A 609

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           ++  + +     E  LE       +  ++  Q +    E 
Sbjct: 610 LKTNIEEAREAHEQELERQKEERAEALANQKQELTELFEE 649


>gi|108805097|ref|YP_645034.1| ABC transporter-like protein [Rubrobacter xylanophilus DSM 9941]
 gi|108766340|gb|ABG05222.1| ABC transporter related [Rubrobacter xylanophilus DSM 9941]
          Length = 613

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           L+ +L  + G  + +   +R++ L  +     L+ +   ++ ++ E + L   +  +
Sbjct: 543 LAARLVAVEG--EIEAVERRINRLEKELATADLYADGRRSREVVLEHRELKGVLERL 597


>gi|148284146|ref|YP_001248236.1| ABC transporter, ATP-binding protein [Orientia tsutsugamushi str.
           Boryong]
 gi|146739585|emb|CAM79335.1| ABC transporter, ATP-binding protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 601

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 11/75 (14%)

Query: 2   KLSRQLN-CLGGLFD-----WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQ---- 50
           KLS +L+     + D           ++  L  K  DP+L+  N  +  +  +E +    
Sbjct: 525 KLSTKLSYKFQRMLDSIPKEITQLETQVEDLEKKLADPNLYQNNQDKFLLFSKELETSKL 584

Query: 51  HLDNAISFIKEIQDR 65
            ++   +  ++I++R
Sbjct: 585 RIEELFNTWQKIENR 599


>gi|88810356|ref|ZP_01125613.1| probable ATP-binding component of ABC transporter [Nitrococcus
           mobilis Nb-231]
 gi|88791986|gb|EAR23096.1| probable ATP-binding component of ABC transporter [Nitrococcus
           mobilis Nb-231]
          Length = 641

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 3/74 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVI-EAKMLMRERQHLDNAISFIK 60
           KL R+L+ L      +    ++  L  +  DP  +       +  + E       +    
Sbjct: 566 KLQRELDQLPER--IEVLEAKVGELQARISDPAFYNEPQTTIQKTLAELDTRQTELDRAL 623

Query: 61  EIQDRLCDNLILLE 74
           E    L D    LE
Sbjct: 624 ERWAELEDMKAALE 637


>gi|194334959|ref|YP_002016819.1| ATPase AAA-2 domain-containing protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312777|gb|ACF47172.1| ATPase AAA-2 domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 440

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 29/115 (25%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLIL 72
            +RL  +  +  D            L  E++ +          I   ++++  L D  I 
Sbjct: 7   KKRLEEIEKQLAD------------LNEEQRRIKARWDAEKELIHASRKLKSELEDLRIQ 54

Query: 73  LELALEEDDCSILQET--------SDNLQRIKLEVEYKQF--ESLLSGEADSNDA 117
            E      D   + E            LQ  K ++E KQ   E L+  E D+ D 
Sbjct: 55  AEEYERSGDYGKVAEIRYGKITQLEKELQANKEKIEQKQASGELLMKEEIDAEDI 109


>gi|22126987|ref|NP_670410.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis KIM 10]
 gi|45442551|ref|NP_994090.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597295|ref|YP_071486.1| peptidyl-tRNA hydrolase domain protein [Yersinia pseudotuberculosis
           IP 32953]
 gi|108806540|ref|YP_650456.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis Antiqua]
 gi|108813093|ref|YP_648860.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis Nepal516]
 gi|145598927|ref|YP_001163003.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis Pestoides
           F]
 gi|153950494|ref|YP_001400020.1| peptidyl-tRNA hydrolase domain protein [Yersinia pseudotuberculosis
           IP 31758]
 gi|162420286|ref|YP_001607749.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis Angola]
 gi|165927135|ref|ZP_02222967.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166211494|ref|ZP_02237529.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400121|ref|ZP_02305639.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167425353|ref|ZP_02317106.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167470131|ref|ZP_02334835.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis FV-1]
 gi|170023338|ref|YP_001719843.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186896400|ref|YP_001873512.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|270487317|ref|ZP_06204391.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis KIM D27]
 gi|294503082|ref|YP_003567144.1| hypothetical protein YPZ3_0972 [Yersinia pestis Z176003]
 gi|21960032|gb|AAM86661.1|AE013912_5 hypothetical protein y3111 [Yersinia pestis KIM 10]
 gi|45437416|gb|AAS62967.1| Protein chain release factor B [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51590577|emb|CAH22218.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108776741|gb|ABG19260.1| hypothetical protein YPN_2933 [Yersinia pestis Nepal516]
 gi|108778453|gb|ABG12511.1| hypothetical protein YPA_0543 [Yersinia pestis Antiqua]
 gi|145210623|gb|ABP40030.1| hypothetical protein YPDSF_1645 [Yersinia pestis Pestoides F]
 gi|152961989|gb|ABS49450.1| peptidyl-tRNA hydrolase domain protein [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353101|gb|ABX87049.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis Angola]
 gi|165921031|gb|EDR38255.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166207265|gb|EDR51745.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167050829|gb|EDR62237.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055753|gb|EDR65537.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749872|gb|ACA67390.1| Class I peptide chain release factor [Yersinia pseudotuberculosis
           YPIII]
 gi|186699426|gb|ACC90055.1| Class I peptide chain release factor [Yersinia pseudotuberculosis
           PB1/+]
 gi|262361120|gb|ACY57841.1| hypothetical protein YPD4_0932 [Yersinia pestis D106004]
 gi|262365361|gb|ACY61918.1| hypothetical protein YPD8_1233 [Yersinia pestis D182038]
 gi|270335821|gb|EFA46598.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis KIM D27]
 gi|294353541|gb|ADE63882.1| hypothetical protein YPZ3_0972 [Yersinia pestis Z176003]
          Length = 146

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTGV 259
           + ++  +  +   RA GAGGQHVN T +A+ +                      H+ T  
Sbjct: 16  VTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAE 75

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
              +++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR 
Sbjct: 76  GVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTK-------GSKIRR 126


>gi|329297973|ref|ZP_08255309.1| ABC transporter ATPase component [Plautia stali symbiont]
          Length = 635

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 23/68 (33%), Gaps = 7/68 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQ----HLDNAI 56
            L+R+L  L      +    R+  L  +   P  +     + + ++         L+   
Sbjct: 565 NLTRELEQLPQ--KLEQLETRIGELQAQMSHPDFFSQPHDKTQQVLDALAQAEQELETTF 622

Query: 57  SFIKEIQD 64
              +E++ 
Sbjct: 623 ERWEELEA 630


>gi|295100020|emb|CBK89109.1| Membrane-bound metallopeptidase [Eubacterium cylindroides T2-87]
          Length = 454

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 44/103 (42%), Gaps = 11/103 (10%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++ + G  + ++ ++R+S +   TED     +  + + L   +  L+   S  + +++  
Sbjct: 156 IDLIMGSDNLNDMLRRISGVERITED-----DQDQIEKLNELKAELELQKSEQERLENET 210

Query: 67  CDNLILLELA------LEEDDCSILQETSDNLQRIKLEVEYKQ 103
            +    LE        LEE    +++E    +  ++ ++   Q
Sbjct: 211 KEQKAQLEEEREQVKQLEESYNKLVEEYQKQIADLQAKMRSAQ 253


>gi|257062871|ref|YP_003142543.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
 gi|256790524|gb|ACV21194.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
          Length = 891

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D + + QRL  L  +      W +  +A     E ++  + I  ++ ++  +    +  E
Sbjct: 435 DDEPSKQRLEELRGQMATAKEWLDARKA-----EWRNEKDVIESVQRLKAEIDAAHVEEE 489

Query: 75  LALEEDDCSILQETS-DNLQRIKLEVEYKQ 103
            A  E D S   E     +  ++ ++   +
Sbjct: 490 QATREGDLSRASEIRYARIPELQRQLAEAE 519


>gi|218698859|ref|YP_002406488.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           IAI39]
 gi|218368845|emb|CAR16594.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 140

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ RSQ  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKAR 105


>gi|66520744|ref|XP_393856.2| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Apis
           mellifera]
          Length = 198

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 25/144 (17%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPTGV----- 259
           F+  +V    +      I   +  I   R+SGAGGQHVN T+S V I  H+ +       
Sbjct: 46  FTPTFVPEDPNAKFSGYIPIKELNITYSRSSGAGGQHVNCTNSKVDIRFHLQSAKWLSEE 105

Query: 260 -------------------VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
                              +++ +  RSQ  N A A   LR  ++E      E      E
Sbjct: 106 IKSKLLEQYKNKLSKEGYLIIKSELTRSQQLNLADALRKLRETIWEATKPPPETSPETLE 165

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVK 324
             + +     + R +  + + M+K
Sbjct: 166 LKRKQELTAARKRLFEKRKHSMIK 189


>gi|121710680|ref|XP_001272956.1| cell polarity protein (Tea1), putative [Aspergillus clavatus NRRL 1]
 gi|119401106|gb|EAW11530.1| cell polarity protein (Tea1), putative [Aspergillus clavatus NRRL 1]
          Length = 1502

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 15   DWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLIL 72
            D + A + +S  + +  + P  W+   E + L +    L  +  S I  ++ ++      
Sbjct: 1242 DLEAAQRSISQASGQASEAPAEWE--AERQKLQQSLSELQKDTTSSIAALESQITKLKQD 1299

Query: 73   LELALEEDDCS------ILQETSDNLQRIKLEVEYKQFESLL 108
            L  A  E D S      I +E +   ++ + E+E  + E+ L
Sbjct: 1300 LSAAEAEKDESRSEYESIKEELAAAAEKNRAELEQLKHENAL 1341


>gi|331232629|ref|XP_003328976.1| hypothetical protein PGTG_10716 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309307966|gb|EFP84557.1| hypothetical protein PGTG_10716 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1018

 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 11/94 (11%)

Query: 15  DWDNAVQRLSFLN-----TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           D + A  R++ L       + +   L       +    E   L+ ++   KE++ +L + 
Sbjct: 374 DLETAKLRIAELEGVVDSHQKDQADL---QNRHQESSTEVAKLEASV---KELKQQLDEA 427

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           +   E A+EE      +E    L   ++E E ++
Sbjct: 428 INSKEAAIEEASSHHTKELESKLNEARIEFETQK 461


>gi|301631267|ref|XP_002944721.1| PREDICTED: uncharacterized 15.2 kDa protein in pcaJ 3'region-like
           [Xenopus (Silurana) tropicalis]
          Length = 140

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 32/137 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---------------------- 258
           +++ E + +I   RA GAGGQ+VN   SAV +    T                       
Sbjct: 7   LQVPEHEVQITAMRAQGAGGQNVNKVSSAVHLRFDITASSLPLPVQQRLLALRDGRITQD 66

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GRQIRSY 315
             ++++ QQ RSQ  N+A AW  L A +  + +  R   A     +  +    G+++RS 
Sbjct: 67  GVLIIKAQQHRSQELNRADAWARLLALVNSVAVPPRARRATRPTLASQQRRREGKRLRS- 125

Query: 316 VLQPYQMVKDLRTNIEK 332
                  VK LR  +E 
Sbjct: 126 ------AVKALRGRVES 136


>gi|326797213|ref|YP_004315033.1| class I peptide chain release factor [Marinomonas mediterranea
           MMB-1]
 gi|326547977|gb|ADZ93197.1| Class I peptide chain release factor [Marinomonas mediterranea
           MMB-1]
          Length = 138

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 30/131 (22%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI------------------------P 256
           + I   + ++   RA GAGGQ+VN   SA+ +                            
Sbjct: 9   VSIPPHEIQLTAIRAQGAGGQNVNKVSSAIHLRFDIRASSLPGFYKERLLALSDTRITKE 68

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
             ++++ QQ R+Q  N+  A   L+A +      ++   A             ++ R   
Sbjct: 69  GEIIIKAQQHRTQELNREDALERLKALILSATRVQKARRATKPTR------SSQKKRVDS 122

Query: 317 LQPYQMVKDLR 327
            +    VK LR
Sbjct: 123 KKQRGKVKALR 133


>gi|198413452|ref|XP_002120395.1| PREDICTED: similar to RAD50 homolog, partial [Ciona intestinalis]
          Length = 438

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 8/131 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-E 79
           + +  L +K  D        + K L  +   L   I+   + Q  L DN  L E   E E
Sbjct: 107 KEIEELESKIVDFE-----NKMKKLRTDIARLQKEIATCTDRQRDLEDNSALRERNREIE 161

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGTESQDWANML 137
           D    L E  + L  +       +   L    +D        +V   + G   +     L
Sbjct: 162 DVRKKLLEMEEKLGGMNAAKLDSEVRQLTKEHSDLTKEKERCKVRQESLGENVRSLQQEL 221

Query: 138 LRMYTRWAEKR 148
            R   ++A+KR
Sbjct: 222 SRENFKFADKR 232


>gi|138893891|ref|YP_001124344.1| ABC transporter ATP-binding protein Uup [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265404|gb|ABO65599.1| ABC transporter ATP-binding protein Uup [Geobacillus
           thermodenitrificans NG80-2]
          Length = 643

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 16/43 (37%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
                ++L+ L ++  DP +  +    + +++    L      
Sbjct: 94  LLAIEKQLAALGSQLGDPDVLADPARYEKILKAYDELQEQYKE 136



 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 4/44 (9%), Positives = 18/44 (40%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
            +    +++ +  +  DP ++ +    + L +E +     +  +
Sbjct: 589 IETLEAQIAEVEQQLCDPSIYGDYETVQRLSQENEERKRQVEKL 632


>gi|170724915|ref|YP_001758941.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
           woodyi ATCC 51908]
 gi|169810262|gb|ACA84846.1| Class I peptide chain release factor [Shewanella woodyi ATCC 51908]
          Length = 137

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           + + E++      R+SGAGGQH+N   +A +I                      H  T  
Sbjct: 8   VSLQENEIEWQFIRSSGAGGQHLNKVSTAAQIIFDINASSLPEFYKQALLKKADHRITKS 67

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++++CQ  RSQ  N+  A       +  + + ++  +A
Sbjct: 68  GKIIIKCQASRSQDFNRQTALEQFIELVASVAIVQKRRVA 107


>gi|289805029|ref|ZP_06535658.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 121

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRA 107


>gi|302036838|ref|YP_003797160.1| putative peptide chain release factor, class I [Candidatus
           Nitrospira defluvii]
 gi|190343252|gb|ACE75640.1| peptidyl-tRNA hydrolase domain protein [Candidatus Nitrospira
           defluvii]
 gi|300604902|emb|CBK41235.1| putative Peptide chain release factor, class I [Candidatus
           Nitrospira defluvii]
          Length = 138

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 24/92 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------- 258
           S  + I + +  +   RA GAGGQHVN   SA+ +     G                   
Sbjct: 5   STHVSIPDEEIELTAVRAQGAGGQHVNKVSSAIHLRFNILGSSLPPFYKERLLALRDHRI 64

Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRAKLY 285
                ++++ Q  RSQ +N+A A   L+  + 
Sbjct: 65  SREGTIIIKAQDSRSQERNRALALERLQELIR 96


>gi|793852|emb|CAA58496.1| G-utrophin (predicted protein) [Mus musculus]
          Length = 987

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 16/97 (16%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  +N +      W ++         R HL+ +      +   L + +  L +  E
Sbjct: 84  LQHRLDDMNQR------WNDLKA--KSASIRAHLEASAEKWNRLLASLEELIKWLNMKDE 135

Query: 79  E--------DDCSILQETSDNLQRIKLEVEYKQFESL 107
           E         D   LQ   D+ + ++ E++ K++  L
Sbjct: 136 ELKKQMPIGGDVPALQLQYDHCKVLRRELKEKEYSVL 172


>gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|54035777|sp|Q73T66|CLPB_MYCPA RecName: Full=Chaperone protein ClpB
 gi|41398784|gb|AAS06403.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 848

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + +RL  L ++  D        +   L    Q+  NAI  ++E++++L       + A
Sbjct: 436 EASKERLEKLRSELADQK-----EKLAELTTRWQNEKNAIDVVRELKEQLETLRGESDRA 490

Query: 77  LEEDDCSILQETS-----DNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAG--- 126
             + D +   E       +  ++++  +   +     +L  E   +D    V A  G   
Sbjct: 491 ERDGDLAKAAELRYGRIPEVEKKLEAALPQAEARENVMLKEEVGPDDIAEVVSAWTGIPA 550

Query: 127 GTESQDWANMLLRMY 141
           G   +     LLRM 
Sbjct: 551 GRMLEGETAKLLRME 565


>gi|300712756|ref|YP_003738569.1| Kinetochore-Ndc80 complex, subunit Spc25 [Halalkalicoccus jeotgali
           B3]
 gi|299126440|gb|ADJ16778.1| Kinetochore-Ndc80 complex, subunit Spc25 [Halalkalicoccus jeotgali
           B3]
          Length = 647

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  V+++  L +  E     ++++ A+   +E   L+     ++  Q+ L +++  LE  
Sbjct: 422 EELVEKIEDLESAVEADEDDEDLLAAQ---KEVTQLELKRDRLERKQNALAEDIENLEEQ 478

Query: 77  LEEDD--CSILQETSDNLQRIKLEVEYKQFESL 107
           L E D   +  +E +  L+ ++  +E  + E++
Sbjct: 479 LAERDQLEARREEINAELEELRTRIERIEREAI 511


>gi|164414764|pdb|2JY9|A Chain A, Nmr Structure Of Putative Trna Hydrolase Domain From
           Salmonella Typhimurium. Northeast Structural Genomics
           Consortium Target Str220
          Length = 148

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A     +  E     +
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSK 122


>gi|149366932|ref|ZP_01888965.1| hypothetical protein YPE_2195 [Yersinia pestis CA88-4125]
 gi|165939855|ref|ZP_02228395.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011890|ref|ZP_02232788.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167419677|ref|ZP_02311430.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|218928235|ref|YP_002346110.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis CO92]
 gi|229837774|ref|ZP_04457934.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis Pestoides A]
 gi|229840996|ref|ZP_04461155.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843097|ref|ZP_04463247.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903536|ref|ZP_04518649.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis Nepal516]
 gi|115346846|emb|CAL19732.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149290546|gb|EDM40622.1| hypothetical protein YPE_2195 [Yersinia pestis CA88-4125]
 gi|165912258|gb|EDR30895.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165989156|gb|EDR41457.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166962418|gb|EDR58439.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|229679306|gb|EEO75409.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis Nepal516]
 gi|229689973|gb|EEO82032.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697362|gb|EEO87409.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229704151|gb|EEO91163.1| hypothetical protein YaeJ with similarity to translation release
           factor [Yersinia pestis Pestoides A]
 gi|320014201|gb|ADV97772.1| peptide chain release factor 1 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 138

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTGV 259
           + ++  +  +   RA GAGGQHVN T +A+ +                      H+ T  
Sbjct: 8   VTLASGEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAE 67

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
              +++ Q+ RSQ  N+  A   L A + +  + ++   A            G +IR 
Sbjct: 68  GVVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTK-------GSKIRR 118


>gi|332283975|ref|YP_004415886.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7]
 gi|330427928|gb|AEC19262.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7]
          Length = 644

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIK 60
           L  +L  +    D + A QRL  LN    DP  + +    +   ++ E   L      ++
Sbjct: 571 LDAKLKKVDA--DMERAGQRLQVLNALIADPEFYSDARRDERLKVLEEHGELSKKHGQLE 628

Query: 61  EIQDRLCDNLILL 73
           E    L + L  L
Sbjct: 629 EEWLMLQEELEAL 641


>gi|320164505|gb|EFW41404.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 318

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESD      +  G GGQ VN + + V + H+PTG+ V+C   RS  +N+ QA   L   +
Sbjct: 182 ESDLEEKFIKGGGKGGQKVNKSTNGVFLRHLPTGIAVRCHMHRSLAQNQKQARKQLCELV 241


>gi|118355640|ref|XP_001011079.1| hypothetical protein TTHERM_00142410 [Tetrahymena thermophila]
 gi|89292846|gb|EAR90834.1| hypothetical protein TTHERM_00142410 [Tetrahymena thermophila
           SB210]
          Length = 503

 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             + +D ++      ++  + ++  L     +IKE  ++  D + L++  + +D+ S  +
Sbjct: 282 EKECQDENV------SQKYLEQQNKLKKIGEYIKEFNNQQSDLIFLIDFNITQDNESKTK 335

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +T + + +++ ++     E+LL  E    +  + ++
Sbjct: 336 KTRETMHQLEQQLYSFCVENLLKNEIPLQNMIISLN 371


>gi|322697303|gb|EFY89084.1| myosin type II heavy chain [Metarhizium acridum CQMa 102]
          Length = 2388

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 10/112 (8%)

Query: 1    MKLSRQLNCLGGL-FDWDNAVQRL----SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
            +++ + L     L  D +   +RL    + L  K        +    +  + E     + 
Sbjct: 971  VRIQQTLESERALALDKEEIFKRLQTREAELEEKLS--GALDDQERLEDQLDELMEAKSR 1028

Query: 56   ISF-IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
                +++ + +L     L+  A  ED+ S L   S  L+    E+  KQ E 
Sbjct: 1029 AEQDVEKFRHQLEQAAGLI--AKLEDEKSKLSAKSVELENAVKEISRKQSER 1078


>gi|260795120|ref|XP_002592554.1| hypothetical protein BRAFLDRAFT_118903 [Branchiostoma floridae]
 gi|229277775|gb|EEN48565.1| hypothetical protein BRAFLDRAFT_118903 [Branchiostoma floridae]
          Length = 3563

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 28/169 (16%)

Query: 16   WDNAVQRLSFLNTKTED-----PHL---WQNV-IEAKMLMRERQHLDNAISFIKE-IQDR 65
             +   +R+  L  + E        L     +     +   RE +  ++ +  +++ +  R
Sbjct: 1937 IEELRRRIRELEAENEALRKKIADLRRELDDQTANMERYQREARDANSEVERLEQLLAQR 1996

Query: 66   LCDNLILL-ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV--- 121
              D   L  +L    D+ +I +  +  + R + E    Q +        SND  + +   
Sbjct: 1997 ESDIRGLQSDLLSARDEVNITKMKTTEITRAESEQLSSQMKL-------SNDLQMALNEK 2049

Query: 122  --HAGAGGTESQDWANML----LRMYTRWAEKRKFKTEALEIHDGEEAG 164
                GA   E++   + L         ++AE    K +  ++ + E +G
Sbjct: 2050 QGRLGAMEAEARKLRSDLEISRRDNEEKFAEINGLKNKTRDM-ESELSG 2097


>gi|72161594|ref|YP_289251.1| peptidyl-tRNA hydrolase domain protein [Thermobifida fusca YX]
 gi|71915326|gb|AAZ55228.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 142

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 24/117 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV--------------------- 259
           +E+ + +      R+SG GGQH NT  + V ++   T                       
Sbjct: 11  VELRDDELVWRFSRSSGPGGQHANTASTRVSLSLDVTTTAVLTEEQRERVLRRLGPRLVD 70

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
               V  Q  RSQ +N+  AW  L A L E       +      S   +    R+ R
Sbjct: 71  GVLTVSAQDFRSQARNREVAWERLAALLSEAARPPARKRRPTKLSRAAKERRLREKR 127


>gi|170742386|ref|YP_001771041.1| class I peptide chain release factor [Methylobacterium sp. 4-46]
 gi|168196660|gb|ACA18607.1| Class I peptide chain release factor [Methylobacterium sp. 4-46]
          Length = 141

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 25/94 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI------------------------P 256
           I I ES+      RASG GGQ+VN   +AV++                            
Sbjct: 9   ISIDESELEESFVRASGPGGQNVNKVATAVQLRFDVRRSPSLPNAVAIRLMKLAGRRLTA 68

Query: 257 TGV-VVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            GV V+  Q+ R+Q +N+A+A   L   + E  +
Sbjct: 69  EGVLVITAQEHRTQDRNRAEARERLAELVREAAI 102


>gi|330799970|ref|XP_003288013.1| hypothetical protein DICPUDRAFT_94545 [Dictyostelium purpureum]
 gi|325081972|gb|EGC35470.1| hypothetical protein DICPUDRAFT_94545 [Dictyostelium purpureum]
          Length = 1451

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 2   KLSRQLNCLGGLF--DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           KL   L  L  +   D     ++   L + T+         ++  L +E   L   +  +
Sbjct: 495 KLKEALVKLRDITMNDKHEMSKKSKELESITKQ--FMALNDKSNRLEQE---LAAKVEEV 549

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            E++  L D      L  +  + ++  E S+ ++ +K  V   +    LS E   N A L
Sbjct: 550 IELKQALEDAENSESLVTDLSERNL--ELSEEVEDLKATVADLESFRDLSEELSDNQAAL 607

Query: 120 E 120
           E
Sbjct: 608 E 608


>gi|204926867|ref|ZP_03218069.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204323532|gb|EDZ08727.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 140

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + E   ++++  A     +  E     +
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKEFTAEQKKRRATRPTRASKERRLSSK 122


>gi|156095406|ref|XP_001613738.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148802612|gb|EDL44011.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 1526

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 11  GGLFDWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
             + D +   + +      +  K ++  L       + + ++ + L+     +   +  L
Sbjct: 767 KDMLDMEVKRKEIEKDKDDMEIKKKEIELAN-----EEISKQNKQLEEEKDMLNRRKKEL 821

Query: 67  CDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQ 103
            +   LL+    E D    +L+E    L  +   +E KQ
Sbjct: 822 EEESSLLDNTKREVDEQNDLLKERKRELDELNKLLEEKQ 860


>gi|75908191|ref|YP_322487.1| peptidyl-tRNA hydrolase domain protein [Anabaena variabilis ATCC
           29413]
 gi|75701916|gb|ABA21592.1| Class I peptide chain release factor [Anabaena variabilis ATCC
           29413]
          Length = 137

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 24/91 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----------------------- 254
           S +I I +S+  I   R+ GAGGQ+VN   +A+ +                         
Sbjct: 5   SQKIIIPDSEIEISAIRSQGAGGQNVNKVSTAIHLRFNIEASSLPAFYKEQLLKLNDRRI 64

Query: 255 IPTGVVV-QCQQERSQHKNKAQAWNMLRAKL 284
              GVVV + Q+ RSQ +NK +A   L+  +
Sbjct: 65  NQEGVVVIKAQEHRSQEQNKEEALQRLKDLI 95


>gi|42566260|ref|NP_192209.2| protein binding / zinc ion binding [Arabidopsis thaliana]
 gi|42572815|ref|NP_974504.1| protein binding / zinc ion binding [Arabidopsis thaliana]
 gi|122229999|sp|Q0WPJ7|RF298_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RF298; AltName:
           Full=RING finger protein 298
 gi|110738035|dbj|BAF00952.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656858|gb|AEE82258.1| putative E3 ubiquitin-protein ligase RF298 [Arabidopsis thaliana]
 gi|332656859|gb|AEE82259.1| putative E3 ubiquitin-protein ligase RF298 [Arabidopsis thaliana]
          Length = 814

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 9/163 (5%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V R+  L  + +D   W N    +  +R  +     +  +++ ++   +     +L  
Sbjct: 470 KLVPRMKDLQKELQDWTDWANQKVKQATVRLLKD-QPELKALRKEKEEAEEFRKEKQLLE 528

Query: 78  E------EDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDAYLEVHAGAGGTES 130
           E       +    L   ++ L+R    +   + E SLL  E ++ +      A +   E+
Sbjct: 529 ENTIKRRSEMELALNNATNQLERTNNTIRRLELEQSLLKREREAANIRASESAESC-REA 587

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           ++    LL+    W  ++    E L+    + AG++      K
Sbjct: 588 KERVQRLLKNSQSWEGQKNLLQEELKSQRDKVAGLQQEVAKAK 630


>gi|118466771|ref|YP_883920.1| chaperone ClpB [Mycobacterium avium 104]
 gi|254777230|ref|ZP_05218746.1| chaperone ClpB [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118168058|gb|ABK68955.1| chaperone ClpB [Mycobacterium avium 104]
          Length = 848

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + + +RL  L ++  D        +   L    Q+  NAI  ++E++++L       + A
Sbjct: 436 EASKERLEKLRSELADQK-----EKLAELTTRWQNEKNAIDVVRELKEQLETLRGESDRA 490

Query: 77  LEEDDCSILQETS-----DNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAG--- 126
             + D +   E       +  ++++  +   +     +L  E   +D    V A  G   
Sbjct: 491 ERDGDLAKAAELRYGRIPEVEKKLEAALPQAEARENVMLKEEVGPDDIAEVVSAWTGIPA 550

Query: 127 GTESQDWANMLLRMY 141
           G   +     LLRM 
Sbjct: 551 GRMLEGETAKLLRME 565


>gi|160894692|ref|ZP_02075467.1| hypothetical protein CLOL250_02243 [Clostridium sp. L2-50]
 gi|156863626|gb|EDO57057.1| hypothetical protein CLOL250_02243 [Clostridium sp. L2-50]
          Length = 909

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 15/125 (12%)

Query: 10  LGGLFDWDNAVQRLSFLN---TKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEI 62
           L G    D    RL  L       EDP            M ++  L       +  +KE+
Sbjct: 209 LNGAMTDDELKDRLEDLEFSSGDVEDPFF---QEYWNRTMGQKDDLTDGIQELLDGVKEL 265

Query: 63  QDRLCDNLI-LLELALEEDD--CSILQETSDNLQRI-KLEVEYKQFESLLSGEAD-SNDA 117
           +D L +     LEL     +   + L+E +  L+     E+    FE++L  E D +++A
Sbjct: 266 KDGLAELTDHNLELTDASGEIFEAYLKEANKTLKNYGVEELTKDNFETVLQTEIDGADNA 325

Query: 118 YLEVH 122
            L   
Sbjct: 326 ILRFS 330


>gi|124505341|ref|XP_001351412.1| conserved Plasmodium protein, unknown function [Plasmodium
           falciparum 3D7]
 gi|23498192|emb|CAD49163.1| conserved Plasmodium protein, unknown function [Plasmodium
           falciparum 3D7]
          Length = 194

 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 12/124 (9%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVR---ITHIPTGVVVQCQQERSQHKNKAQ 275
            +I +  S       + +GAGGQ VN T++ V      +    ++++C + R    N+  
Sbjct: 70  EDIGVYPSHMEEMFVKGTGAGGQKVNKTNNCVIIKYKNNQNNNIIIKCHKYRCLQNNRIY 129

Query: 276 AWNMLRAKL------YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL--R 327
           A  +L  K+       E E+  +EE         +E      I ++  +  ++ KD   R
Sbjct: 130 ARELLYKKITSLKEKAEREIIHKEEKEKRKILRLSEKEKNESI-NFKKRRSEIKKDRQKR 188

Query: 328 TNIE 331
              E
Sbjct: 189 IKYE 192


>gi|321472128|gb|EFX83099.1| hypothetical protein DAPPUDRAFT_100969 [Daphnia pulex]
          Length = 463

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTK--TEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           +KL ++L  +    D  +   R+  L  +  T D    Q++I  + L  E   + + +  
Sbjct: 72  LKLQQRLKTVEK--DKASLATRVEELERESPTADVRRAQDMIRLQELEMENAKIKDDLKN 129

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           ++  +    +N + L  +L+    S     SD L R + E E      LL    + ND
Sbjct: 130 LR--RQAATENEVQLPRSLDMLM-SQFDAMSDELDRRREECEPWWLTRLLEVTLEKND 184


>gi|242008434|ref|XP_002425011.1| Immature colon carcinoma transcript 1 protein precursor, putative
           [Pediculus humanus corporis]
 gi|212508640|gb|EEB12273.1| Immature colon carcinoma transcript 1 protein precursor, putative
           [Pediculus humanus corporis]
          Length = 190

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 25/96 (26%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPTG----------------------- 258
           I   D  I   ++SG GGQ+VN  D+ V I  H+ +                        
Sbjct: 58  IPIKDLDIKYTKSSGPGGQNVNKRDTKVDIRFHVKSATWISEDTKQKLLEKYYTRVNKDG 117

Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
             V++  + RSQ  N+A A + +R+ +++LE  ++E
Sbjct: 118 YFVIKSDKTRSQDLNRADALSYIRSIIFKLEEPEKE 153


>gi|332798257|ref|YP_004459756.1| Seryl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332695992|gb|AEE90449.1| Seryl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 425

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 5/104 (4%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--LQETSDNLQR 94
            ++     L  ER++L   +  +K +++   + +   + A E  D  I  ++E S  ++ 
Sbjct: 25  ADLDRFLKLDEERRNLLFEVEKLKNLRNSESEEIARKKKAKEPADELIARMKEVSQQIKE 84

Query: 95  IKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +     EVE    E LL+     +D+     + A   E + W  
Sbjct: 85  MDEKINEVENSLEEILLTIPNIPDDSVPIGESDADNVEVRRWGE 128


>gi|298207258|ref|YP_003715437.1| glutamyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849894|gb|EAP87762.1| glutamyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 1146

 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 40/105 (38%), Gaps = 15/105 (14%)

Query: 1   MKLSRQL----NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM-LMRERQHLDNA 55
           ++L+++       L    D +   Q+   L+    D    +N  EA+  L +E + L   
Sbjct: 639 LELTKRYYVEKKALKVAEDLEKLAQKQEELSKNDGD----ENTKEAQEELNKEFKKLQE- 693

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
                +++D   +N  L E      D    +   ++ +    +++
Sbjct: 694 -----DLKDLEEENKDLKEPMDISRDEEKEESIKEDQEDASEKLD 733



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 46/113 (40%), Gaps = 3/113 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  +    + +   ++L  L  + ++    +N+ +   L +       A+   ++
Sbjct: 600 ELLEELQKVQDKINKEELSEKLEKLAKQNQNEE--KNLEQLLELTKRYYVEKKALKVAED 657

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEAD 113
           ++        L +   +E+     +E +   ++++ +++  + E+  L    D
Sbjct: 658 LEKLAQKQEELSKNDGDENTKEAQEELNKEFKKLQEDLKDLEEENKDLKEPMD 710


>gi|315613214|ref|ZP_07888124.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis ATCC 49296]
 gi|315314776|gb|EFU62818.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis ATCC 49296]
          Length = 633

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
             EA+ LMR+ + L+  I  ++     +       E  LE +D   L E    L +I   
Sbjct: 565 QKEARKLMRQIESLEAEIEELETQSQAIS------EKMLETNDAEKLMELQAELDKISHR 618

Query: 99  VEYKQFE 105
            E    E
Sbjct: 619 QEEAMLE 625


>gi|256958176|ref|ZP_05562347.1| predicted protein [Enterococcus faecalis DS5]
 gi|256948672|gb|EEU65304.1| predicted protein [Enterococcus faecalis DS5]
 gi|315036210|gb|EFT48142.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX0027]
          Length = 681

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E + +  E + L + +   +++ D   DN      +LEE D  +L ET  +      
Sbjct: 510 DNEELEEI--EDKALTDEVDNFEDLTDDEADN------SLEEIDVPVLDETVSDFDTSLA 561

Query: 98  EVEYKQFESLLSGEADSNDAYLE 120
           +    + E ++  E DS D+ +E
Sbjct: 562 DESNIELEPIIENELDSLDSSVE 584


>gi|72382395|ref|YP_291750.1| peptidyl-tRNA hydrolase domain protein [Prochlorococcus marinus
           str. NATL2A]
 gi|72002245|gb|AAZ58047.1| protein chain release factor B [Prochlorococcus marinus str.
           NATL2A]
          Length = 140

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 24/115 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------- 258
           +  +EI  ++ +    R+SGAGGQ+VN  DS   I    +                    
Sbjct: 6   NSNLEIPGNEIKWRFSRSSGAGGQNVNKADSRAEIVFNVSESKTLTPYQKFRISIQDEVK 65

Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
                + +  Q +R+Q++N+  A N L + L +L     +       +  ++   
Sbjct: 66  LSNGCICIAVQDKRTQYQNRQLAINRLTSTLRDLLKPPPKTRRETIPTRSSQRRR 120


>gi|332701466|ref|ZP_08421554.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551615|gb|EGJ48659.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 659

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDR 65
            +      + LN +   P L+ +    + +          LD A++  +E++  
Sbjct: 591 IEALETEQAELNARLSSPGLYSDPQSVQKVQARMAEIESGLDRALARWEELESA 644


>gi|270264796|ref|ZP_06193060.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
 gi|270041094|gb|EFA14194.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
          Length = 137

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 24/103 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + I +++  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVAIPDNELELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALNNHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           T    V+++ Q+ RSQ  N+  A   L A + +  + ++   A
Sbjct: 65  TADGVVIIKAQEYRSQELNREAALARLVALIQQAMVVEKARRA 107


>gi|225023193|ref|ZP_03712385.1| hypothetical protein EIKCOROL_00045 [Eikenella corrodens ATCC
           23834]
 gi|224944017|gb|EEG25226.1| hypothetical protein EIKCOROL_00045 [Eikenella corrodens ATCC
           23834]
          Length = 204

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 6/106 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI--KEIQDRLCDNLILL 73
            +   QR++ L  +  D + + +  E + L R  Q    A      K+  + L      L
Sbjct: 52  PEQLAQRVAELEAELADINKY-HQAELQNLGRRHQEEIQAAHKFAAKKFAEELLKVKDYL 110

Query: 74  ELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           E+AL +   +  ++       L  +K   E  Q + +L    D  D
Sbjct: 111 EMALLDQSGNFDALKMGVEMTLTELKRAFEQAQIKEILPQPGDKLD 156


>gi|291001031|ref|XP_002683082.1| hypothetical protein NAEGRDRAFT_45002 [Naegleria gruberi]
 gi|284096711|gb|EFC50338.1| hypothetical protein NAEGRDRAFT_45002 [Naegleria gruberi]
          Length = 451

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 40/105 (38%), Gaps = 13/105 (12%)

Query: 15  DWDNAVQRLSFLNTKTED--------PHLWQNVIEAKMLMRERQHLDNAISFIK----EI 62
           D +    R+        D         +  +N  E   + ++ + L+  IS +     +I
Sbjct: 301 DIEKINSRIQKREKMLSDDSSIGNLLANYSKNQQELDEITKKYKELEETISVLSGDLGKI 360

Query: 63  QDRLCDNLILLE-LALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
              L D  +  E L  +  D + L+E  + L +I+ +++     +
Sbjct: 361 NQDLSDIKVNAEDLTKKMADTTPLREIKEALVKIRNDIKQMDMRA 405


>gi|268316297|ref|YP_003290016.1| MutS2 family protein [Rhodothermus marinus DSM 4252]
 gi|262333831|gb|ACY47628.1| MutS2 family protein [Rhodothermus marinus DSM 4252]
          Length = 804

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 10/92 (10%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC-DNLILLE 74
            +  V+ L   N + E             L  E+  L+      +  + +L  +   + +
Sbjct: 539 LEALVRTLEARNQELE--------ARLAALTEEQARLEQLRREYEARRAQLEAETEAIRQ 590

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
            ALEE    +L+E +  ++R   E++  Q E 
Sbjct: 591 RALEEA-EQLLKEANARIERTIREIKEAQAER 621


>gi|170768661|ref|ZP_02903114.1| peptidyl-tRNA hydrolase domain protein [Escherichia albertii
           TW07627]
 gi|170122765|gb|EDS91696.1| peptidyl-tRNA hydrolase domain protein [Escherichia albertii
           TW07627]
          Length = 140

 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 24/96 (25%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG--- 258
           I + +  I   R+ GAGGQHVN   +A+ +                      H+ +    
Sbjct: 10  IPDGELEITAIRSQGAGGQHVNKGSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGV 69

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +V++ Q+ RSQ  N+  A   L   + EL   ++  
Sbjct: 70  IVIKAQEYRSQELNREAALARLMTVIKELTTVQKAR 105


>gi|326674234|ref|XP_687391.4| PREDICTED: myosin-XVIIIa [Danio rerio]
          Length = 2218

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 14   FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
               +     L  LN++       ++      + ++ + L+  +   +E  D     + +L
Sbjct: 1511 LKLEQMEAELQDLNSQES-----KDEASLAKIKKQLRDLEAKVKDQEEELDEQAGTIQML 1565

Query: 74   ELAL---EEDDCSILQETSDNLQRIKLEVEY---------KQFESLLSGEADSNDAYLE 120
            E A    E +   + Q  S  ++  + EVE          KQ E  L  E +     L 
Sbjct: 1566 EQAKLRLEMEMERLRQTHSKEIESKEDEVEEIRQSCSKKLKQMEVQLEEEYEDKQKVLR 1624


>gi|297626959|ref|YP_003688722.1| Chaperone clpB 2 (ATP-dependent Clp protease B2) (Clp chaperone)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922724|emb|CBL57301.1| Chaperone clpB 2 (ATP-dependent Clp protease B2) (Clp chaperone)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 860

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 13/115 (11%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL+ L  +  D        + ++L         A++ I E++ ++    I  E A   
Sbjct: 440 KARLARLEQELADAE-----EKLRLLESRWAQEKAALNRIGELKTQIDQLRIEAEKAQRV 494

Query: 80  DDCSILQET--------SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D +   E            L++ K     ++   +++ E  + D    V A  G
Sbjct: 495 GDLATAAEIAYGRIPALERELEQAKQAENEEKASRMVADEVTTEDIAEVVSAWTG 549


>gi|221135007|ref|ZP_03561310.1| ABC transporter ATP-binding protein [Glaciecola sp. HTCC2999]
          Length = 651

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 7/86 (8%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIK 60
           L +Q+         ++   RL  +     D  L+    +A+    + E+  L        
Sbjct: 570 LRKQITQSEKTM--ESTQSRLVEVEAALGDSTLYDVENKAQLTEYLAEQATLT---QRHD 624

Query: 61  EIQDRLCDNLILLELALEEDDCSILQ 86
             +++ C+    LELA  E D  +  
Sbjct: 625 AAEEQWCEAQEALELAQAEFDQQMAA 650


>gi|196251106|ref|ZP_03149786.1| ABC transporter-related protein [Geobacillus sp. G11MC16]
 gi|196209400|gb|EDY04179.1| ABC transporter-related protein [Geobacillus sp. G11MC16]
          Length = 554

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 5/43 (11%), Positives = 16/43 (37%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
               ++L+ L ++  DP +  +    + +++    L      
Sbjct: 5  LLAIEKQLAALGSQLGDPDVLADPARYEKILKAYDELQEQYKE 47



 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 4/44 (9%), Positives = 18/44 (40%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
            +    +++ +  +  DP ++ +    + L +E +     +  +
Sbjct: 500 IETLEAQIAEVEQQLCDPSIYGDYETVQRLSQENEERKRQVEKL 543


>gi|187776981|ref|ZP_02993454.1| hypothetical protein CLOSPO_00526 [Clostridium sporogenes ATCC
           15579]
 gi|187773909|gb|EDU37711.1| hypothetical protein CLOSPO_00526 [Clostridium sporogenes ATCC
           15579]
          Length = 866

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPTLQREIEEKE 521


>gi|306829557|ref|ZP_07462747.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus mitis ATCC 6249]
 gi|304428643|gb|EFM31733.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus mitis ATCC 6249]
          Length = 633

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
             EA+ LMR+ ++L+  I  ++     +       E  LE +D   L E    L++I   
Sbjct: 565 QKEARKLMRQIENLEAEIEELETQSQAIS------EQMLETNDAEQLMELQAELEKINHR 618

Query: 99  VEYKQFE 105
            E    E
Sbjct: 619 QEAAMLE 625


>gi|330797415|ref|XP_003286756.1| hypothetical protein DICPUDRAFT_77611 [Dictyostelium purpureum]
 gi|325083274|gb|EGC36731.1| hypothetical protein DICPUDRAFT_77611 [Dictyostelium purpureum]
          Length = 207

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 12  GLFDWDNAVQRLSFLNTKT--EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             F++D    ++  L  +       +       + L  ER   +     I+++Q    DN
Sbjct: 76  ASFEFDQKKDKIVELTEELKNTKEKILNETKNIEKLKGERIDSEKRTKDIEKLQKLKDDN 135

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
               E      D  ++++   +++     V   
Sbjct: 136 KEFKEELTNYADSELMEQLKKDVKTAIAAVNRY 168


>gi|294495078|ref|YP_003541571.1| ATP-dependent chaperone ClpB [Methanohalophilus mahii DSM 5219]
 gi|292666077|gb|ADE35926.1| ATP-dependent chaperone ClpB [Methanohalophilus mahii DSM 5219]
          Length = 869

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 22/100 (22%)

Query: 40  IEAKMLMRERQHL--------------DNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83
              + L +E   +                 I+ +  +++++ D    L+LA  E D    
Sbjct: 441 ERLQSLEKEISEIRAESDAMRTRWENEKATIAKLNSLKEQIDDTKTQLDLAETEGDFEKA 500

Query: 84  ------ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
                  L       +  +  ++ KQ   LL  E D  D 
Sbjct: 501 SRLKYGTLVPLQHEYEEEENRLKEKQTNMLLKEEVDEEDI 540


>gi|47212864|emb|CAF93221.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2754

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 17/118 (14%)

Query: 14   FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
               +     L  LN++       ++      L ++ + L+  +   +E  D     + +L
Sbjct: 1817 LKLERLEAELQDLNSQES-----KDEASLARLKKQTRELEARVKDQEEELDEQAGTIQML 1871

Query: 74   ELAL---EEDDCSILQETSDNLQRIKLEVEY---------KQFESLLSGEADSNDAYL 119
            E A    E +     Q  S  ++    EVE          KQ E  L  E D     +
Sbjct: 1872 EQAKLRLEMEMERQRQSHSKEVESKDEEVEEIRQSCSKKLKQMEVQLEEEYDEKQKVM 1929


>gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding subunit [Nocardia farcinica IFM
           10152]
 gi|54018884|dbj|BAD60254.1| putative Clp protease ATP-binding subunit [Nocardia farcinica IFM
           10152]
          Length = 853

 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + +  RL  L  +  D     +  +   LM   Q+  +AI  ++ ++++L       E A
Sbjct: 436 EASKLRLEKLRQELAD-----DREKLNQLMTRWQNEKSAIDQVRTLKEQLEALRGESERA 490

Query: 77  LEEDDCSILQETS-DNLQRIKLEVEYKQF--------ESLLSGEADSNDAYLEVHAGAG 126
             + D     E     +  ++ ++   +         E +L  E   +D    V +  G
Sbjct: 491 ERDGDLGKAAELRYGRIPSLEKQLAEAEKASGAAADGEVMLKEEVGPDDIAEVVSSWTG 549


>gi|313201966|ref|YP_004040624.1| class I peptide chain release factor [Methylovorus sp. MP688]
 gi|312441282|gb|ADQ85388.1| Class I peptide chain release factor [Methylovorus sp. MP688]
          Length = 173

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 5/119 (4%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
              +               +           I I +S+  +   RA GAGGQ+VN   SA
Sbjct: 12  FAAVRVTRQRRGSPALQCLVPQNAEPLFMQPIVIPDSEFELTAMRAQGAGGQNVNKVSSA 71

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           V +        ++       HK +  A    R     + + K +   +   + +  I  
Sbjct: 72  VHLR-----FDIRASSLDEAHKARLLALRDARVSSEGVLIIKAQRHRSQLLNRQDAIER 125


>gi|84498287|ref|ZP_00997084.1| peptidyl-tRNA hydrolase domain protein [Janibacter sp. HTCC2649]
 gi|84381787|gb|EAP97670.1| peptidyl-tRNA hydrolase domain protein [Janibacter sp. HTCC2649]
          Length = 136

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 34/139 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP------------------------TG 258
           I  +D      R+SG GGQ VNTTDS V +   P                          
Sbjct: 7   IDAADLLERFSRSSGPGGQGVNTTDSRVELVFDPAASTSLTPTQIERVLEVLDSSLVQGR 66

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-GWGRQIRSYVL 317
           +VV   + RSQ +N+A A   L   L       R+ +A    + +      G Q R   L
Sbjct: 67  LVVAASEYRSQLRNRAAARERLGNLL-------RDALAPAPPARRPTRPTRGSQRRR--L 117

Query: 318 QPYQMVKDLRTNIEKTSPS 336
              +   DL++   + +P 
Sbjct: 118 DAKKRRGDLKSGRGRVTPD 136


>gi|299473300|emb|CBN77699.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 6779

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 1    MKLSRQ-LNCLGGLFD---WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE--RQHLDN 54
            ++L ++ L  + G F     ++A++RL  +N    +  L +N   A    +E   + L  
Sbjct: 6154 LELRQRQLQEIAGTFRAIAPESALERLQEINATRHEEEL-ENFHAAMEREKEERLKRLQE 6212

Query: 55   AISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
              S  +E ++ R        E+   + +   + +     Q  +L+ +  + E 
Sbjct: 6213 ERSKFEEQLRQRHD-----AEMQRLQAEEQKVLDVEREAQEARLKEKQAELER 6260


>gi|310778914|ref|YP_003967247.1| magnesium transporter [Ilyobacter polytropus DSM 2926]
 gi|309748237|gb|ADO82899.1| magnesium transporter [Ilyobacter polytropus DSM 2926]
          Length = 455

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            +   +S IK ++    D   LL+   E+ D  +  E  + L   + E    + + L S 
Sbjct: 78  SVKKLVSTIKRLES--DDATDLLQDI-EDIDEELAAEILEGLDYKEQE----EIQLLKSY 130

Query: 111 EADSNDAYLE 120
           E D   AY++
Sbjct: 131 EEDQAGAYMQ 140


>gi|54633202|dbj|BAD66837.1| KIAA0638 splice variant 2 [Homo sapiens]
          Length = 1125

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 462 EERAQVLGHV---EQLKVRVKELEQQL--------QESAREAEMERALLQGEREAERALL 510

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + ++ L+      E  +F+ L
Sbjct: 511 QKEQKAVDQLQEKLVALETGIQKERDKEAEALETETKLFEDLEFQQL 557


>gi|321257323|ref|XP_003193548.1| dynactin [Cryptococcus gattii WM276]
 gi|317460018|gb|ADV21761.1| Dynactin, putative [Cryptococcus gattii WM276]
          Length = 1262

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 44/100 (44%), Gaps = 12/100 (12%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLILLEL- 75
           NA  ++  L  +        + + A+ ++ +    +  +   I+E++  + D   + EL 
Sbjct: 464 NAESQVEDLKQQL------DDALGAEDMLEQLTERNLQMGERIEEMRLTIEDLEAIKELN 517

Query: 76  -ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
             LEE      ++ ++ ++ +  E+  ++     SGE D+
Sbjct: 518 DELEEGHVETEKQLNEEIEALTAELRKERVR---SGELDA 554


>gi|300123183|emb|CBK24456.2| unnamed protein product [Blastocystis hominis]
          Length = 889

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + +  RL  +  + ++        + K LM   +     +  ++ +++++ +    +E A
Sbjct: 435 EASKARLEKVKEELQEV-----REQLKPLMMRHEKEKEGMDELRRLKNKVAETQNKIEAA 489

Query: 77  LEEDDCS--------ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
               D +        +L +  + ++R + E+E ++   +L  E  +ND  
Sbjct: 490 KRVHDTARASDLQYYVLPDLEEAIKRQEEEIEKQKDSRMLKEEVTANDIC 539


>gi|256827110|ref|YP_003151069.1| ABC transporter ATPase [Cryptobacterium curtum DSM 15641]
 gi|256583253|gb|ACU94387.1| ATPase component of ABC transporters with duplicated ATPase domain
           protein [Cryptobacterium curtum DSM 15641]
          Length = 668

 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   +RL  +     DP  + N   +  ++ E   L   ++     +D   +    +E A
Sbjct: 608 EADRKRLDEVLELLADPTFYTNESASSDVIGEHARLKERLA---AAEDEWLELSEEIERA 664

Query: 77  LEE 79
           ++ 
Sbjct: 665 MDS 667


>gi|148693664|gb|EDL25611.1| pleckstrin homology-like domain, family B, member 1, isoform CRA_a
           [Mus musculus]
          Length = 1224

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 43/109 (39%), Gaps = 18/109 (16%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMR-----ERQHLDNAISF 58
             +   LG +   +    R+  L  + ++      +  A  L++     ER  L      
Sbjct: 623 EERAQVLGRV---EQLKIRVKELEQQLQEAAREAEMERA--LLQGEREAERASLQKEQRA 677

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           + ++Q++L    + LE  +++D      + +D L+      E  +F+ L
Sbjct: 678 VDQLQEKL----VALETGIQKD----RDKEADALETETKLFEDLEFQQL 718


>gi|322693735|gb|EFY85585.1| myosin class II heavy chain [Metarhizium acridum CQMa 102]
          Length = 2258

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 16   WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD-RLCDNLILL- 73
                 QR+  L           +   A  + +     D+ IS+++E+   R  D   ++ 
Sbjct: 1994 LQAREQRIEELEQSLSK----SDPDAAAKISKR----DDEISWLRELLAVRHSDLQDIIS 2045

Query: 74   ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
             L+ +  D   +++ +  L R  L++E ++ E  L+G
Sbjct: 2046 ALSGDHYDRDTVKDAAIRL-RANLQMEEQERERALNG 2081


>gi|322616064|gb|EFY12981.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620847|gb|EFY17707.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623802|gb|EFY20639.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627250|gb|EFY24041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322630557|gb|EFY27321.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638225|gb|EFY34926.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640710|gb|EFY37361.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645506|gb|EFY42033.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648201|gb|EFY44668.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322657151|gb|EFY53434.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657521|gb|EFY53793.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663841|gb|EFY60041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666674|gb|EFY62852.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672168|gb|EFY68280.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676521|gb|EFY72592.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679387|gb|EFY75432.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686286|gb|EFY82270.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323193466|gb|EFZ78674.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197512|gb|EFZ82647.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201219|gb|EFZ86288.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209614|gb|EFZ94547.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212134|gb|EFZ96958.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216439|gb|EGA01165.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323223371|gb|EGA07706.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225932|gb|EGA10152.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323228527|gb|EGA12656.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236860|gb|EGA20936.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239640|gb|EGA23687.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242313|gb|EGA26342.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249975|gb|EGA33871.1| hypothetical protein SEEM9199_18642 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252405|gb|EGA36256.1| hypothetical protein SEEM8282_19849 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255688|gb|EGA39441.1| hypothetical protein SEEM8283_01112 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262875|gb|EGA46425.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265361|gb|EGA48857.1| hypothetical protein SEEM8285_04625 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271852|gb|EGA55270.1| hypothetical protein SEEM8287_04917 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 140

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T SA+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A     +  E     +
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELIAEQKSRRATRPTRASKERRLSSK 122


>gi|311107251|ref|YP_003980104.1| ABC transporter [Achromobacter xylosoxidans A8]
 gi|310761940|gb|ADP17389.1| ABC transporter family protein 64 [Achromobacter xylosoxidans A8]
          Length = 638

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIK 60
           L  +L  +    + +    +L  L+    DP L+ +   A  + +M E       +    
Sbjct: 563 LESKLAKIET--EMEKLRAKLHALDAVIADPDLYSDARRAERQKVMAEHGEHGKRMD--- 617

Query: 61  EIQDRLCDNLILLELALEED 80
           E++++  +    LE   + +
Sbjct: 618 ELEEQWLEIQGSLEEIEQSE 637


>gi|126308771|ref|XP_001377961.1| PREDICTED: similar to ICT1 protein [Monodelphis domestica]
          Length = 208

 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 25/143 (17%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPT----------- 257
           W  P        +I     ++   ++SG GGQ+VN  ++   +  H+ T           
Sbjct: 61  WRIPDDAKQASTDIPIDRLQVSYSKSSGPGGQNVNKVNTKAEVRFHLATADWIAEPVRQK 120

Query: 258 -------------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
                         +++     R Q +N A     +R  + +     +E         + 
Sbjct: 121 ISVLFKNKISKSGELIITSDSSRYQFRNLADCLQKIRDMIAQASQVPKEPSKEDAVLRRI 180

Query: 305 EIGWGRQIRSYVLQPYQMVKDLR 327
            I    + R    + +   K  R
Sbjct: 181 RIENSNRERLRQKRIHSSTKANR 203


>gi|254516546|ref|ZP_05128605.1| ABC transporter, ATP-binding protein [gamma proteobacterium NOR5-3]
 gi|219674969|gb|EED31336.1| ABC transporter, ATP-binding protein [gamma proteobacterium NOR5-3]
          Length = 632

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQH----LDNAISFIKEIQDR 65
            +    R S L T   DP  ++ +  E K L+ E       L++ I    E+++R
Sbjct: 577 IEALESRQSELETLCADPAFYERDAEEVKDLLAELSDIAPTLESKIERWTELEER 631


>gi|168216816|ref|ZP_02642441.1| clpB protein [Clostridium perfringens NCTC 8239]
 gi|182381023|gb|EDT78502.1| clpB protein [Clostridium perfringens NCTC 8239]
          Length = 866

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL  L  +     L     E      +E+ H    IS +++++  L +   L E 
Sbjct: 440 DASKERLVALEKELA--ELQDKNDEMTIKYEKEKSH----ISAVRDLKAELDEARGLAEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEA----SMEKDNENALL 534


>gi|168214442|ref|ZP_02640067.1| clpB protein [Clostridium perfringens CPE str. F4969]
 gi|170714087|gb|EDT26269.1| clpB protein [Clostridium perfringens CPE str. F4969]
          Length = 866

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL  L  +     L     E      +E+ H    IS +++++  L +   L E 
Sbjct: 440 DASKERLVALEKELA--ELQDKNDEMTIKYEKEKSH----ISAVRDLKAELDEARGLAEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEA----SMEKDNENALL 534


>gi|332529476|ref|ZP_08405435.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624]
 gi|332041122|gb|EGI77489.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624]
          Length = 130

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 25/128 (19%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRIT----------HIPTG-------------- 258
           I E +      RA G GGQ+VN   SAV +           H+                 
Sbjct: 3   IPEHEVEFTAVRAQGPGGQNVNKVSSAVHLRFDIRASSLPEHVKDRLLAWPDQRVSKDGV 62

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGRQIRSYVL 317
           VV++ Q  R+Q +NKA+AW  L   + +     R   A     +SK     G+ +R+ V 
Sbjct: 63  VVIKAQTARTQEQNKAEAWARLAELVAQASHIPRPRRATKPTRASKLRRLRGKAVRAEVK 122

Query: 318 QPYQMVKD 325
                V D
Sbjct: 123 AGRGKVSD 130


>gi|282880308|ref|ZP_06289022.1| ATP-dependent chaperone protein ClpB [Prevotella timonensis CRIS
           5C-B1]
 gi|281305810|gb|EFA97856.1| ATP-dependent chaperone protein ClpB [Prevotella timonensis CRIS
           5C-B1]
          Length = 863

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 17/139 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEIQDRLCD 68
            D   ++L  L  + E      + ++ K L +E   L              K + +++  
Sbjct: 410 LDEMTRKLKQLEIEREAIKRENDEVKIKQLDKEIAELKEQEQSFRAKWESEKSLVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG- 127
           +   +E    E D     E   N +R+  E+ Y + +SL   +AD  +   ++ A  GG 
Sbjct: 470 DKQEIEHLKFEAD---RAEREGNYERV-AEIRYGKLQSL---QADIENIKKQLKATQGGE 522

Query: 128 --TESQDWANMLLRMYTRW 144
                +  A+ +  + +RW
Sbjct: 523 GMVREEVTADDIAEVVSRW 541


>gi|168206333|ref|ZP_02632338.1| clpB protein [Clostridium perfringens E str. JGS1987]
 gi|168210020|ref|ZP_02635645.1| clpB protein [Clostridium perfringens B str. ATCC 3626]
 gi|170662172|gb|EDT14855.1| clpB protein [Clostridium perfringens E str. JGS1987]
 gi|170711834|gb|EDT24016.1| clpB protein [Clostridium perfringens B str. ATCC 3626]
          Length = 866

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL  L  +     L     E      +E+ H    IS +++++  L +   L E 
Sbjct: 440 DASKERLVALEKELA--ELQDKNDEMTIKYEKEKSH----ISAVRDLKAELDEARGLAEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEA----SMEKDNENALL 534


>gi|91978494|ref|YP_571153.1| peptidyl-tRNA hydrolase domain protein [Rhodopseudomonas palustris
           BisB5]
 gi|91684950|gb|ABE41252.1| Class I peptide chain release factor [Rhodopseudomonas palustris
           BisB5]
          Length = 139

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 32/132 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------------ 258
           I + D  I   RASG GGQ+VN   +A ++    T                         
Sbjct: 10  IDDDDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKIALPEDAALRLIGLAGQRMTKEGV 69

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V+  Q+ R+Q +N+A A + L   L       R  +        T    G + R    +
Sbjct: 70  IVIHAQRFRTQERNRADAIDRLLELL-------RAAMVRPIPRRATRPTLGSKKRRLEGK 122

Query: 319 PYQ-MVKDLRTN 329
             +  VK  R+ 
Sbjct: 123 KRRGDVKAGRSG 134


>gi|182626453|ref|ZP_02954205.1| clpB protein [Clostridium perfringens D str. JGS1721]
 gi|177908250|gb|EDT70808.1| clpB protein [Clostridium perfringens D str. JGS1721]
          Length = 866

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL  L  +     L     E      +E+ H    IS +++++  L +   L E 
Sbjct: 440 DASKERLVALEKELA--ELQDKNDEMTIKYEKEKSH----ISAVRDLKAELDEARGLAEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEA----SMEKDNENALL 534


>gi|154316652|ref|XP_001557647.1| hypothetical protein BC1G_04257 [Botryotinia fuckeliana B05.10]
 gi|150846057|gb|EDN21250.1| hypothetical protein BC1G_04257 [Botryotinia fuckeliana B05.10]
          Length = 1169

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 49/134 (36%), Gaps = 21/134 (15%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           ++S +          +   +RL+        L  + E   L   +   +  +R+   +  
Sbjct: 438 EMSAEEKTSQSYLQLERKNERLTEALLRLRDLTQQAEA-ELKDEIKSLQEDVRDLGSVKE 496

Query: 55  AISF-----------IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
                          I++++ +L + L   ++  E  D ++    S+ ++ +K+ +E  +
Sbjct: 497 NYDAVKGKLAQSEAIIEDLRQQLDNALGAEDMIEELTDRNM--SMSEQIEELKVTIEDLE 554

Query: 104 FESLLSGEADSNDA 117
               L+ E + N  
Sbjct: 555 SLKELNDELEINHV 568


>gi|110798650|ref|YP_696119.1| clpB protein [Clostridium perfringens ATCC 13124]
 gi|110673297|gb|ABG82284.1| clpB protein [Clostridium perfringens ATCC 13124]
          Length = 866

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL  L  +     L     E      +E+ H    IS +++++  L +   L E 
Sbjct: 440 DASKERLVALEKELA--ELQDKNDEMTIKYEKEKSH----ISAVRDLKAELDEARGLAEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEA----SMEKDNENALL 534


>gi|169347218|ref|ZP_02866157.1| clpB protein [Clostridium perfringens C str. JGS1495]
 gi|169296614|gb|EDS78745.1| clpB protein [Clostridium perfringens C str. JGS1495]
          Length = 866

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL  L  +     L     E      +E+ H    IS +++++  L +   L E 
Sbjct: 440 DASKERLVALEKELA--ELQDKNDEMTIKYEKEKSH----ISAVRDLKAELDEARGLAEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEA----SMEKDNENALL 534


>gi|223278342|ref|NP_001138379.1| C-type lectin domain family 4 member M isoform 11 [Homo sapiens]
 gi|15383614|gb|AAK91863.1| sDC-SIGN2 type I isoform [Homo sapiens]
          Length = 332

 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-- 59
           +L++    +G L +     +    L              + + + +E   L  A+  +  
Sbjct: 94  ELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPE 153

Query: 60  -KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
             ++Q+   +   L     E  + S LQE    L ++K  VE  
Sbjct: 154 KSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVERL 197


>gi|78485220|ref|YP_391145.1| class I peptide chain release factor [Thiomicrospira crunogena
           XCL-2]
 gi|78363506|gb|ABB41471.1| Conserved hypothetical protein with peptidyl-tRNA hydrolase domain
           [Thiomicrospira crunogena XCL-2]
          Length = 138

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PT 257
           + I +S+  +   R+ GAGGQ+VN   SA+ +                            
Sbjct: 8   VSIPDSEIELTAIRSQGAGGQNVNKVASAIHLRFDIAASSLPDFYKQRLLALQDSRITKQ 67

Query: 258 GVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+VV + QQ R+Q  N+  A   LR  +  + + K++ +A
Sbjct: 68  GIVVIKAQQFRTQEANRESALERLRMLIKSVAVVKKKRVA 107


>gi|172057603|ref|YP_001814063.1| DNA topoisomerase IV, A subunit [Exiguobacterium sibiricum 255-15]
 gi|171990124|gb|ACB61046.1| DNA topoisomerase IV, A subunit [Exiguobacterium sibiricum 255-15]
          Length = 801

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
              FD + A +R   ++       +    +        +    + +       DR  + +
Sbjct: 363 RTSFDLEQAKRRQEVVSALMTAISVLDETLALIRSASNKSEAKDKLIERFSFTDRQAEAV 422

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           ++L+L    +    + E  D   +++ E+   + E +L+ E   N   +
Sbjct: 423 VMLQLYRLTNTD--IVELQDEAAKLEKEI--ARLEKILNDEKTRNRLII 467


>gi|212530168|ref|XP_002145241.1| dynactin, putative [Penicillium marneffei ATCC 18224]
 gi|210074639|gb|EEA28726.1| dynactin, putative [Penicillium marneffei ATCC 18224]
          Length = 1340

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDP------HLWQNVIEAKMLMRERQHLDN 54
           +++ +    L        A+ RL  +  +TE         L  ++ E   +  E + +  
Sbjct: 434 LQMEKTNERLR------EALIRLRDMTQQTEAELRDQIKELQDDLEEYTTVKAEYESIKE 487

Query: 55  AI----SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            +    + + E++ +L   L   E+  E  D ++     + +  +K  +E  +    +S 
Sbjct: 488 KLLASETNVDELKQQLETALGAEEMIEELADKNMR--YQEEINELKAAIEDLESLKEISD 545

Query: 111 EADSNDA 117
           E + N  
Sbjct: 546 ELELNHV 552


>gi|84514641|ref|ZP_01002005.1| hypothetical protein SKA53_10484 [Loktanella vestfoldensis SKA53]
 gi|84511692|gb|EAQ08145.1| hypothetical protein SKA53_10484 [Loktanella vestfoldensis SKA53]
          Length = 137

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 25/104 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------------------------ 253
           + +IEI++ +      RASG GGQ+VN   +AV +                         
Sbjct: 4   TDQIEIADWELTESFARASGPGGQNVNKVSTAVELRFEAERSPNLPDPVKRRLRRLAGRR 63

Query: 254 HIPTG-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
               G +V+  Q  RSQ +N+  A   L   +    +  +  +A
Sbjct: 64  WTNDGAIVIFVQDTRSQARNRDIARERLAELVLSATVVPKRRVA 107


>gi|257467641|ref|NP_001158135.1| suppressor of glucose by autophagy [Mus musculus]
 gi|123297464|emb|CAM24113.1| novel protein [Mus musculus]
          Length = 1654

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 10/104 (9%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-----LQETSDNLQR 94
            +   L +E   +   +   + +   L   L   ELA             L+   +    
Sbjct: 398 KKLTKLAKENDSMKEELLKYRSLYGDLDAALSAEELADAPHSRETELKVHLKLVEEEANL 457

Query: 95  IKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +   +   + E+  L  E D     ++ H G GG E++   + L
Sbjct: 458 LSRRIVELEVENRGLRAEMDD----MKDHGGGGGPEARLAFSSL 497


>gi|329725981|gb|EGG62458.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis
           VCU144]
          Length = 644

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +    ++S +  +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELEAQISHMEEQLTQPEVFNDPLKASKFANQKSDTEQKLEQIMLEWEKLQEKL 644


>gi|320583505|gb|EFW97718.1| Essential protein involved in intracellular protein transport [Pichia
            angusta DL-1]
          Length = 1440

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +L   ++    + + +     L  L    E     Q+  E +  + E   L    +  +E
Sbjct: 1277 QLRELVDLKKQMKEREKLKTELLELEAYRER---TQDYDELQQRVAEYDELKRKTTDYEE 1333

Query: 62   IQDRLCDNLILL----ELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            ++ ++ D+  L     EL    +D   L+  +   ++++ +V   +
Sbjct: 1334 LKSKVADHEKLQSDYTELQKTLEDYETLKSKAAEHEKLQKQVVELE 1379


>gi|315576293|gb|EFU88484.1| membrane family protein [Enterococcus faecalis TX0309B]
 gi|315582785|gb|EFU94976.1| membrane family protein [Enterococcus faecalis TX0309A]
          Length = 542

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E + +  E + L + +   +++ D   DN      +LEE D  +L ET  +      
Sbjct: 371 DNEELEEI--EDKALTDEVDNFEDLTDDEADN------SLEEIDVPVLDETVSDSDTSLA 422

Query: 98  EVEYKQFESLLSGEADSNDAYLE 120
           +    + ES++  E DS D+ +E
Sbjct: 423 DESNIELESIIENELDSLDSSVE 445


>gi|229820625|ref|YP_002882151.1| Class I peptide chain release factor [Beutenbergia cavernae DSM
           12333]
 gi|229566538|gb|ACQ80389.1| Class I peptide chain release factor [Beutenbergia cavernae DSM
           12333]
          Length = 145

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I E++      R+SG GGQ VNT DS V ++   T   V  + +R +   +     M   
Sbjct: 17  IPEAELSWRFSRSSGPGGQGVNTADSRVELSWDVTASHVLTEVQRDRIVER-LGRRMAGG 75

Query: 283 KLYELELQKREEIANIGESSK 303
            L  +  + R ++ N   +  
Sbjct: 76  VLTVVASEHRAQLRNRDAARS 96


>gi|18310410|ref|NP_562344.1| clpB protein [Clostridium perfringens str. 13]
 gi|54035872|sp|Q8XKG8|CLPB_CLOPE RecName: Full=Chaperone protein ClpB
 gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringens str. 13]
          Length = 866

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D + +RL  L  +     L     E      +E+ H    IS +++++  L +   L E 
Sbjct: 440 DASKERLVALEKELA--ELQDKNDEMTIKYEKEKSH----ISAVRDLKAELDEARGLAEK 493

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
              E D + + E     +  ++ +++ ++     S E D+ +A L
Sbjct: 494 YEREYDLNKVAELKYGKIPELERKIKEQEA----SMEKDNENALL 534


>gi|125975518|ref|YP_001039428.1| cell divisionFtsK/SpoIIIE [Clostridium thermocellum ATCC 27405]
 gi|125715743|gb|ABN54235.1| DNA translocase FtsK [Clostridium thermocellum ATCC 27405]
          Length = 830

 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 46/114 (40%), Gaps = 16/114 (14%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKML-----MRERQHL--DNAISFIK-----EIQDRL 66
              ++  +    ED   ++   EA+ +      +E + +  ++ +   K     ++  R 
Sbjct: 185 IENKMKSIEESMEDDGGFEEPKEAERIHEIAQAQELKDIKPEDTVEKAKMPEEFDVNARD 244

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +N  + E  ++++D  I ++T +  + I+   +  + + +     D  +   E
Sbjct: 245 IENAEMKETVVDKEDEGIAEDTENAWEEIENMDDSTELKDM----NDELECIAE 294


>gi|328544007|ref|YP_004304116.1| ABC transporter nucleotide binding/ATPase protein [polymorphum
           gilvum SL003B-26A1]
 gi|326413751|gb|ADZ70814.1| ABC transporter, nucleotide binding/ATPase protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 623

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKE 61
           L +++       +      ++  L+    DP  + ++   A    RER  ++  ++  +E
Sbjct: 554 LRKKIEAAEK--EMARLQDKIVMLDQTMADPDFFLRDPERAAKFARERAFIEKKLAATEE 611

Query: 62  IQDRLCDNLILLELALEEDDC 82
                      L+LA E ++ 
Sbjct: 612 ---------EWLQLAAELEEA 623


>gi|213965100|ref|ZP_03393298.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46]
 gi|213952214|gb|EEB63598.1| ATP-dependent chaperone ClpB [Corynebacterium amycolatum SK46]
          Length = 859

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 13/115 (11%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  D        +   L    Q+  ++I  ++ +++ L       E A  E
Sbjct: 439 KERLDKLREELAD-----EREKLNALKTRWQNEKSSIDDVRSVREELDALRTESEKAERE 493

Query: 80  DD----CSIL----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D      +      E    L+  +  V   +  S+L  E    +    V A  G
Sbjct: 494 GDYGRVAELRYGRIPELEKKLEAAEESVADAEENSMLKEEVTPQEVAEVVSAWTG 548


>gi|164687115|ref|ZP_02211143.1| hypothetical protein CLOBAR_00741 [Clostridium bartlettii DSM
           16795]
 gi|164604000|gb|EDQ97465.1| hypothetical protein CLOBAR_00741 [Clostridium bartlettii DSM
           16795]
          Length = 565

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 13/92 (14%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLIL 72
           ++A  R   LN     P    +  +     +E   L       +E     +  + + L  
Sbjct: 482 EDAKARFEELNYLKIHPR---DQEK----NKEL--LFRGERMYEEFTGEDRKIIGEALTQ 532

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
            EL L + D +++++    L+ +  E+E  + 
Sbjct: 533 FELILNKQDKAMIEQARKELKEVLDEIETDEL 564


>gi|71411557|ref|XP_808022.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70872142|gb|EAN86171.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 640

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS---AVRITHIPTGVVVQ 262
           F    V P V  ++      +    DT R+SG GGQ  N T++   A  +       V +
Sbjct: 476 FKLTAVCPNVSTTLFSNAHRATVHYDTARSSGPGGQAANVTETQIIAKLLIDGELAYVAE 535

Query: 263 CQQERSQHKNKAQAWNMLR-----------AKLYELELQKREEIANIGESSKTEIGWGRQ 311
            Q  RS   N+  A   L            AK +  E  +R+ +  I E  K       +
Sbjct: 536 AQDSRSALSNREAAMERLSKVRRQQYNEQLAKQHRAERVERQLVQMIAEHLKMNSDTSAE 595

Query: 312 IRS 314
           + +
Sbjct: 596 VMT 598


>gi|323305447|gb|EGA59191.1| Gga1p [Saccharomyces cerevisiae FostersB]
          Length = 557

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 28/161 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKE 61
           + +L  L      D+  +  + L           +   A  + +  E   L        E
Sbjct: 196 AAKLEELLRSGKPDDLKE-ANKLMKIMA--GFKDDTKVAVKQAINNELNKLKRKADLFNE 252

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +         +   +QE   +L+  + +     F+ L+  E D  DA +  
Sbjct: 253 MLTSADEPDL---------ENETIQELYGDLKSAQPK-----FKKLIEEERDD-DALV-- 295

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                 +    + ++++++  R+   +  K E L + D  E
Sbjct: 296 ------SNLSKFNDLVIQLLKRYKSIKGMKEEELNVPDTNE 330


>gi|83945459|ref|ZP_00957806.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
 gi|83851035|gb|EAP88893.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
          Length = 137

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 24/105 (22%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------- 258
           + ++ I ES       R+SG GGQHVN T+SAV++    +                    
Sbjct: 4   TDDLSIDESLITERFVRSSGPGGQHVNKTESAVQLRFDVSASALPDAIKQRLKRIAGTRM 63

Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
                +++  +  RSQ +N+A+A   L+  + +   + +  I + 
Sbjct: 64  TQDGVLILHVEDHRSQDRNRAEARTRLKRLIEQASRKPKPRIKSR 108


>gi|313217019|emb|CBY38210.1| unnamed protein product [Oikopleura dioica]
          Length = 1233

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 22   RLSFLNTKTEDPHLWQN---VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++  L  + ED     +     +A  L RE++ L   I  ++    ++    + LE  ++
Sbjct: 929  QIKELQERLEDEEEINHDLVNKKA-KLEREKRELQKDIEELESTLAKVEQEKVSLEEKVK 987

Query: 79   EDDCSI--LQETSDNLQRIKLEVEYKQFESL--LSGEADS 114
            E+  ++   +E  D L + K  ++ +  + L  L  E D 
Sbjct: 988  ENCDALGNTEEHMDKLAKEKRALQEQHQQVLDDLQVEEDK 1027


>gi|254444270|ref|ZP_05057746.1| hypothetical protein VDG1235_2509 [Verrucomicrobiae bacterium
           DG1235]
 gi|198258578|gb|EDY82886.1| hypothetical protein VDG1235_2509 [Verrucomicrobiae bacterium
           DG1235]
          Length = 139

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 25/118 (21%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTGV 259
           + I   +  I   R+ G+GGQ+VN   +A+ +                      H  T  
Sbjct: 8   VAIPLREIEIKAMRSQGSGGQNVNKVSTAIHLFFDIRASSLPERVKERLLARSDHRITEE 67

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQIR 313
              V++ Q+ RSQ  N+  A   LR  +   L + K+       + +K     G+ IR
Sbjct: 68  GIVVIKSQESRSQEANREAALARLRELVAGALVIPKKRRPTKPSKGAKERRLKGKSIR 125


>gi|319654658|ref|ZP_08008738.1| ABC transporter ATP-binding protein uup [Bacillus sp. 2_A_57_CT2]
 gi|317393652|gb|EFV74410.1| ABC transporter ATP-binding protein uup [Bacillus sp. 2_A_57_CT2]
          Length = 640

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
            ++L  L  +  DP +  N    + +++E   L 
Sbjct: 98  EKQLRSLEEQMADPDILNNSDAYERILKEYDKLQ 131


>gi|213865384|ref|ZP_03387503.1| peptide chain release factor 1 [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 55

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 13/47 (27%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +R   +     D     +    + L RE   L +      + 
Sbjct: 9  LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDW 55


>gi|114571176|ref|YP_757856.1| ABC transporter-like protein [Maricaulis maris MCS10]
 gi|114341638|gb|ABI66918.1| ABC transporter related protein [Maricaulis maris MCS10]
          Length = 602

 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   Q ++ L     DP L+ +      + +    L  A+    + +DR  +   L E 
Sbjct: 543 IEKLSQEIARLEADMADPKLFADSARFTAVSK---RLGEAMQDRADKEDRWLELEALREE 599

Query: 76  AL 77
             
Sbjct: 600 IE 601


>gi|327313393|ref|YP_004328830.1| ATP-dependent chaperone protein ClpB [Prevotella denticola F0289]
 gi|326945354|gb|AEA21239.1| ATP-dependent chaperone protein ClpB [Prevotella denticola F0289]
          Length = 862

 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEIQDRLCD 68
            D   +RL  L  + E      +  +   L +E   L              + + +++  
Sbjct: 410 LDEITRRLKQLEIEREAIKREDDSEKIAQLDKEIAELREQEHSFRAKWEGERALVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG- 127
           +   +E    E D     E   N +R+  E+ Y + + L   E D  +   ++ A  GG 
Sbjct: 470 DKQEMENLKYEAD---RAEREGNYERV-AEIRYSRLKQL---EDDIKNIQQQLQATQGGQ 522

Query: 128 --TESQDWANMLLRMYTRW 144
                +   + +  + +RW
Sbjct: 523 AMVREEVTEDDIAEVVSRW 541


>gi|215485353|ref|YP_002327784.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|218703446|ref|YP_002410965.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli UMN026]
 gi|293403261|ref|ZP_06647358.1| hypothetical protein ECGG_03557 [Escherichia coli FVEC1412]
 gi|298378797|ref|ZP_06988681.1| yaeJ protein [Escherichia coli FVEC1302]
 gi|300900766|ref|ZP_07118912.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 198-1]
 gi|301025922|ref|ZP_07189408.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 69-1]
 gi|312966329|ref|ZP_07780555.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 2362-75]
 gi|331661566|ref|ZP_08362490.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
 gi|331671697|ref|ZP_08372495.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
 gi|215263425|emb|CAS07745.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|218430543|emb|CAR11409.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|284919967|emb|CBG33022.1| putative peptidyl-tRNA hydrolase [Escherichia coli 042]
 gi|291430176|gb|EFF03190.1| hypothetical protein ECGG_03557 [Escherichia coli FVEC1412]
 gi|298281131|gb|EFI22632.1| yaeJ protein [Escherichia coli FVEC1302]
 gi|300355751|gb|EFJ71621.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 198-1]
 gi|300395777|gb|EFJ79315.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 69-1]
 gi|312289572|gb|EFR17466.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 2362-75]
 gi|331061481|gb|EGI33444.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
 gi|331071542|gb|EGI42899.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
          Length = 140

 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ R+Q  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRNQELNREAALARLVAVIKDLTTEQKAR 105


>gi|320104951|ref|YP_004180542.1| ABC transporter-like protein [Isosphaera pallida ATCC 43644]
 gi|319752233|gb|ADV63993.1| ABC transporter related protein [Isosphaera pallida ATCC 43644]
          Length = 644

 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           D  +A  +L+ L  +  DP  ++N   AK        L   +     +     + L L
Sbjct: 588 DIAHAEAQLAELEVQLADPETYKNPERAKACKLRHDQLTADLE---RLYAHWEEALEL 642


>gi|304439244|ref|ZP_07399162.1| phage integrase family site-specific recombinase [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372376|gb|EFM25964.1| phage integrase family site-specific recombinase [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 520

 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R+  ++ +  +        +   +   ++   +    ++E+++      +LL +A E+++
Sbjct: 415 RIETIDKEMLEV-----QEKLLKVANAKKDYTDLADRVEELRNEKE--KLLLNMAEEKNE 467

Query: 82  CSILQETSDNLQRIKLEVEYKQFES 106
            S L+E  + L+  KLE+E    E 
Sbjct: 468 QSRLKELEEFLENQKLEIESYDEEL 492


>gi|298242708|ref|ZP_06966515.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
           44963]
 gi|297555762|gb|EFH89626.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
           44963]
          Length = 893

 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 16/125 (12%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +     L D +    RL  +    E P L        M ++    ++     I++
Sbjct: 301 EMRKTITQ--PLLDLNELDARLGSVEELFESPAL---RSRFTMSLQVFSDMERIAGRIRQ 355

Query: 62  ----------IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
                     ++D L     L EL     +  +L+E ++ +Q  +  ++      + SGE
Sbjct: 356 GTAVRNEVLGLRDNLEHVPELRELLR-GCEALLLRELAEEMQDCQEVIDLVDRALMRSGE 414

Query: 112 ADSND 116
            D + 
Sbjct: 415 EDEHG 419


>gi|238787211|ref|ZP_04631010.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC
           33641]
 gi|238724473|gb|EEQ16114.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC
           33641]
          Length = 164

 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  I +++S+  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SNNISLADSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLALNSHLM 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           T    ++++ Q+ RSQ  N+  A   L A + +  + ++  
Sbjct: 65  TAEGVIIIKAQEYRSQDMNREAAQQRLVALIRQAMVVEKHA 105


>gi|237843203|ref|XP_002370899.1| trichohyalin, putative [Toxoplasma gondii ME49]
 gi|211968563|gb|EEB03759.1| trichohyalin, putative [Toxoplasma gondii ME49]
 gi|221481903|gb|EEE20273.1| trichohyalin, putative [Toxoplasma gondii GT1]
 gi|221502400|gb|EEE28133.1| trichohyalin, putative [Toxoplasma gondii VEG]
          Length = 1427

 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 33/86 (38%), Gaps = 9/86 (10%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL+ L+ + +  H        + L +E+   +  +   + +     +    +E    E
Sbjct: 204 QERLARLDEELQQAH-----HAYQQLRKEQAETEKRVQTCEALYQEEREEKRQIE----E 254

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFE 105
               + +ET   L R+  + +  Q +
Sbjct: 255 RFRELKRETDLQLTRLSEQKDVLQHQ 280


>gi|168177755|ref|ZP_02612419.1| clpB protein [Clostridium botulinum NCTC 2916]
 gi|182671320|gb|EDT83294.1| clpB protein [Clostridium botulinum NCTC 2916]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|138896353|ref|YP_001126806.1| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate
           mutase [Geobacillus thermodenitrificans NG80-2]
 gi|134267866|gb|ABO68061.1| Phospho-2-dehydro-3-deoxyheptonatealdolase/chorismate mutase
           [Geobacillus thermodenitrificans NG80-2]
          Length = 360

 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71
            D    R+  +N +               ++ ER  L   I  IKE Q     + +    
Sbjct: 6   LDELRARVDEINLQLF------------KMINERGRLVQEIGKIKEAQGTHRYDPVRERK 53

Query: 72  LLELALEEDD----CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGA 125
           +L+L  E +D     S LQ     + +  LE++        L+S +    +  +EV    
Sbjct: 54  MLDLISEHNDGPFETSTLQHIFKEIFKAALELQEDDHRKALLVSRKKHPENTIVEVKGER 113

Query: 126 GGTESQDWA 134
            G  +Q + 
Sbjct: 114 IGDGNQYFV 122


>gi|312374466|gb|EFR22017.1| hypothetical protein AND_15886 [Anopheles darlingi]
          Length = 153

 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 26/115 (22%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPTG----------------------V 259
           I  +   I   R+SG GGQ+VNT  + V I  H+ +                       +
Sbjct: 20  IPINKLNITFSRSSGPGGQNVNTVSTKVDIRFHLESASWLPEATRKRLAELGRITKDGFL 79

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE---IANIGESSKTEIGWGRQ 311
           VV+ +  RSQ  N A A   LR+ + + E     E           + E     +
Sbjct: 80  VVRSELTRSQQMNTADAMERLRSFIRQAEQPLSAEPSPETEEMLRRRHEKATRER 134


>gi|219564175|gb|ACL28269.1| hemagglutinin [Influenza A virus (A/bar-headed
           goose/Qinghai/7/2008(H5N1))]
          Length = 569

 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQHLD----NA 55
           K++ Q   +G  F+  N  +R+  LN K ED    +W N  E  +LM   + LD    N 
Sbjct: 404 KMNTQFEAVGREFN--NLERRIESLNKKMEDGFLDVWTNNAELLVLMENERTLDFHDSNV 461

Query: 56  ISFIKEIQDRLCDNLILLELA 76
            +   +++ +L DN    EL 
Sbjct: 462 KNLYDKVRLQLRDN--AKELG 480


>gi|56962646|ref|YP_174372.1| ABC transporter ATP-binding protein [Bacillus clausii KSM-K16]
 gi|56908884|dbj|BAD63411.1| ABC transporter ATP-binding protein [Bacillus clausii KSM-K16]
          Length = 637

 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFI 59
            R++  +    + +     +S L+ +  DP ++ +  +A+ +  E       L+  +   
Sbjct: 575 QRRIEAIET--ELEQIEASISALHEQLADPDVYTDHQKAQTIQAELEQQNNALEALMEEW 632

Query: 60  KEI 62
           + +
Sbjct: 633 ETL 635


>gi|226947643|ref|YP_002802734.1| clpB protein [Clostridium botulinum A2 str. Kyoto]
 gi|226841508|gb|ACO84174.1| clpB protein [Clostridium botulinum A2 str. Kyoto]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|284045996|ref|YP_003396336.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283950217|gb|ADB52961.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 644

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 18/53 (33%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            ++A   LS L  +  DP  W +                A+  +    +R+ D
Sbjct: 592 IESAEAALSELEAELADPAAWADSERTAASSERHAAAKRAVEELYARYERVAD 644


>gi|256004194|ref|ZP_05429177.1| cell divisionFtsK/SpoIIIE [Clostridium thermocellum DSM 2360]
 gi|281419449|ref|ZP_06250463.1| cell division protein FtsK/SpoIIIE [Clostridium thermocellum JW20]
 gi|255991784|gb|EEU01883.1| cell divisionFtsK/SpoIIIE [Clostridium thermocellum DSM 2360]
 gi|281406855|gb|EFB37119.1| cell division protein FtsK/SpoIIIE [Clostridium thermocellum JW20]
 gi|316939638|gb|ADU73672.1| cell division protein FtsK/SpoIIIE [Clostridium thermocellum DSM
           1313]
          Length = 821

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 46/114 (40%), Gaps = 16/114 (14%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKML-----MRERQHL--DNAISFIK-----EIQDRL 66
              ++  +    ED   ++   EA+ +      +E + +  ++ +   K     ++  R 
Sbjct: 176 IENKMKSIEESMEDDGGFEEPKEAERIHEIAQAQELKDIKPEDTVEKAKMPEEFDVNARD 235

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +N  + E  ++++D  I ++T +  + I+   +  + + +     D  +   E
Sbjct: 236 IENAEMKETVVDKEDEGIAEDTENAWEEIENMDDSTELKDM----NDELECIAE 285


>gi|304390874|ref|ZP_07372826.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304325757|gb|EFL93003.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 560

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 7/65 (10%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCD 68
            G+++    + R + ++ +  DP       +   LM E   L  AI      ++  +L  
Sbjct: 91  EGVWEIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145

Query: 69  NLILL 73
            +  L
Sbjct: 146 AMDAL 150


>gi|300121717|emb|CBK22292.2| unnamed protein product [Blastocystis hominis]
          Length = 179

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 25/118 (21%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI-------THIPT---------------- 257
           I++     ++   R+   GGQ+VN  ++ V         T +P                 
Sbjct: 28  IQVPPECIQLSFVRSPVLGGQNVNKVNTKVEARFNVQAATWLPEDVKNRLLSQEKNLINT 87

Query: 258 --GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
              +V+ C +ERSQ+KN+   +  ++ K+ +  +  +E       S + +  W  + R
Sbjct: 88  KGELVITCSEERSQNKNRDIIFRKIQEKIDQASIAPKERKLRREVSDEVKKRWVEEKR 145


>gi|291244980|ref|XP_002742373.1| PREDICTED: laminin, beta 2-like [Saccoglossus kowalevskii]
          Length = 1752

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 51/126 (40%), Gaps = 13/126 (10%)

Query: 18   NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                +L  +      P++ +   E + L ++   + + ++  ++  D + D+L  +E   
Sbjct: 1196 EMEDKLDKIKKLLVAPNVTE--AEVEDLQKDLADIRDGLTGYEKQLDEIEDDLPKIEDRK 1253

Query: 78   EEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             + D  +  L++ + NL +   ++E    +  LS   D   A+  +       ESQ+ + 
Sbjct: 1254 LDADDELDRLEKAAGNLAKKAKDLEDNVTDISLS---DVEGAFNSIK------ESQNKSQ 1304

Query: 136  MLLRMY 141
            M     
Sbjct: 1305 MAQDKV 1310


>gi|170756703|ref|YP_001780063.1| clpB protein [Clostridium botulinum B1 str. Okra]
 gi|169121915|gb|ACA45751.1| clpB protein [Clostridium botulinum B1 str. Okra]
 gi|322804689|emb|CBZ02241.1| clpb protein [Clostridium botulinum H04402 065]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|168050640|ref|XP_001777766.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670867|gb|EDQ57428.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 816

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 26/57 (45%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +      I+++Q ++ D    L  A  E D +  ++  + L++ K ++  K+   L
Sbjct: 257 EIKEVKQEIRKVQQQIDDVEGQLTKAATESDVAYWRKEKEQLRKEKEQLREKELLLL 313


>gi|149910503|ref|ZP_01899143.1| hypothetical protein PE36_05133 [Moritella sp. PE36]
 gi|149806463|gb|EDM66435.1| hypothetical protein PE36_05133 [Moritella sp. PE36]
          Length = 137

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 24/103 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + I +S+  I   RA GAGGQ+VN   +A+ +                      H  
Sbjct: 5   SSNVSIPDSEIDIQAIRAQGAGGQNVNKVSTAIHLRFDIKASSLPEFYKERLLALNDHRI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           T    ++++ Q+ RSQ  NK  A+  L   + +  + ++   A
Sbjct: 65  TKDGVIIIKSQESRSQDFNKQVAFERLIELIKQATVIQKARRA 107


>gi|149278773|ref|ZP_01884908.1| fused predicted transporter subunit of ABC superfamily: ATP-binding
           component [Pedobacter sp. BAL39]
 gi|149230392|gb|EDM35776.1| fused predicted transporter subunit of ABC superfamily: ATP-binding
           component [Pedobacter sp. BAL39]
          Length = 559

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCD 68
            G+ +    ++    +N +   P ++++    + LM  +  L + I  +   E+ ++L  
Sbjct: 94  EGVAEITAILKEYESINEQFGLPEVYEDADAMEKLMNRQGELQDKIDAVNAWELDNKLER 153

Query: 69  NLILL 73
            +  L
Sbjct: 154 AMDAL 158


>gi|321476484|gb|EFX87445.1| hypothetical protein DAPPUDRAFT_312250 [Daphnia pulex]
          Length = 1281

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 43/105 (40%), Gaps = 11/105 (10%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLM-------RERQHLDNAISFI-KEIQD 64
            D +N   +L    +  +D ++       E   +        ++  +L        +++  
Sbjct: 942  DLENLRHKLEERESLIKDMNVMLRNKQEELSEMNVRKEMAEKKLSNLARDNDVASEKLTR 1001

Query: 65   RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
            +L DN++LL+   E++    L+    +++ ++ E    + + + S
Sbjct: 1002 KLEDNILLLKR-KEKEFNETLEHLQQDVETLEKEKADLKEKLMHS 1045



 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQR--LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           +++   L  +  L   +    +  L  +  K  +     ++ +AK  +     ++   + 
Sbjct: 371 VRMKETLVKMRDLAAHEKHQHQRVLKEMEDKLSE---LNDLKKAKQSLS--AQVEEQRAM 425

Query: 59  IKEIQDRLCDNLILLELALEEDDCSI-LQETSDNLQRIKLEVEYK 102
           + E+Q+++   L   E+  +  D ++ L+E    LQ    ++E  
Sbjct: 426 VTELQEQVDAALGAEEMVEQLTDRNLALEEKIGELQDAVADLEQL 470


>gi|313622946|gb|EFR93247.1| ABC transporter, ATP-binding protein [Listeria innocua FSL J1-023]
          Length = 650

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +   P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EETDEKIAELELQLTKPEIFQDHEKAFEITQELDVVKARGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EKVSEELESM 650


>gi|242015590|ref|XP_002428436.1| ciliary dynein heavy chain, putative [Pediculus humanus corporis]
 gi|212513048|gb|EEB15698.1| ciliary dynein heavy chain, putative [Pediculus humanus corporis]
          Length = 4870

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 14/122 (11%)

Query: 5    RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KE 61
             +L   GG+     A  +L+ LN K E   +         + ++    +  ++ I    E
Sbjct: 3448 ERLE--GGMLKIAEASVQLAELNAKLEIQQV--------AVSKKTSGCEELLARISSATE 3497

Query: 62   IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            I +   +++I  +L +EE +  I+ E ++  + +   +   +       + D +D   E+
Sbjct: 3498 IANEKKNDVITKKLEIEEQEKIIMSEKTEAQEILDAALPALEIARAALSDLDKSD-ITEI 3556

Query: 122  HA 123
             +
Sbjct: 3557 RS 3558


>gi|149472055|ref|XP_001516432.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 873

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D   A  RL  L           N  EA  L             + E++ ++      L 
Sbjct: 75  DLLAAQARLKDLEALL-------NSKEA-ALSTALSEKRTLDGELHELRGQVAKLEAALG 126

Query: 75  LALEEDDCSILQ--ETSDNLQRIKLEVEYKQ 103
            A ++    +L+  +  + LQ +K E+++++
Sbjct: 127 EAKKQLQDEMLRRVDAENRLQTLKEELDFQK 157


>gi|149642611|ref|NP_001092404.1| dynactin subunit 1 [Bos taurus]
 gi|148745416|gb|AAI42510.1| DCTN1 protein [Bos taurus]
          Length = 1239

 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 20/121 (16%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT---KTEDPHLW-----QNVIEAKMLMRE-RQHLD 53
           L  +L  L           +L  L     + E    W     +   + +  ++E R+   
Sbjct: 190 LEEKLETLR--LKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAK 247

Query: 54  NAISFIKEIQDRLCDNLILLELA------LEEDDCSILQETS---DNLQRIKLEVEYKQF 104
            A+   +   + + D    +E+A       EE   S+ QE     + ++ +  ++E  + 
Sbjct: 248 EALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEAEVLRERVEELTTDLEILKA 307

Query: 105 E 105
           E
Sbjct: 308 E 308


>gi|153931423|ref|YP_001382793.1| clpB protein [Clostridium botulinum A str. ATCC 19397]
 gi|153935231|ref|YP_001386344.1| clpB protein [Clostridium botulinum A str. Hall]
 gi|152927467|gb|ABS32967.1| clpB protein [Clostridium botulinum A str. ATCC 19397]
 gi|152931145|gb|ABS36644.1| clpB protein [Clostridium botulinum A str. Hall]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|151942331|gb|EDN60687.1| ARF-binding protein [Saccharomyces cerevisiae YJM789]
 gi|190404706|gb|EDV07973.1| ARF-binding protein [Saccharomyces cerevisiae RM11-1a]
 gi|259145595|emb|CAY78859.1| Gga1p [Saccharomyces cerevisiae EC1118]
 gi|323349114|gb|EGA83345.1| Gga1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 557

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 28/161 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKE 61
           + +L  L      D+  +  + L           +   A  + +  E   L        E
Sbjct: 196 AAKLEELLRSGKPDDLKE-ANKLMKIMA--GFKDDTKVAVKQAINNELNKLKRKADLFNE 252

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +         +   +QE   +L+  + +     F+ L+  E D  DA +  
Sbjct: 253 MLTSADEPDL---------ENETIQELYGDLKSAQPK-----FKKLIEEERDD-DALV-- 295

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                 +    + ++++++  R+   +  K E L + D  E
Sbjct: 296 ------SNLSKFNDLVIQLLKRYKSIKGMKEEELNVPDTNE 330


>gi|149201330|ref|ZP_01878305.1| hypothetical protein RTM1035_16932 [Roseovarius sp. TM1035]
 gi|149145663|gb|EDM33689.1| hypothetical protein RTM1035_16932 [Roseovarius sp. TM1035]
          Length = 148

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 33/140 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------------------------T 253
           + +I I + +      RASG GGQ+VN   SAV +                         
Sbjct: 13  TDQIAIEDWELTEQFMRASGPGGQNVNKVSSAVELRFEAERSPNLPLPVKTRLRRLAGRR 72

Query: 254 HIPTGVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
               G VV QC + RSQ +N+    + L   + +  +  +  +A            G + 
Sbjct: 73  WTKEGAVVLQCDETRSQTRNREIVRDRLADLIRQALIAPKRRVATKPTL-------GSKK 125

Query: 313 RSYVLQPYQ-MVKDLRTNIE 331
           R    +  +  VK LR  +E
Sbjct: 126 RRLAAKKQRGEVKALRGQVE 145


>gi|325856627|ref|ZP_08172265.1| ATP-dependent chaperone protein ClpB [Prevotella denticola CRIS
           18C-A]
 gi|325483341|gb|EGC86316.1| ATP-dependent chaperone protein ClpB [Prevotella denticola CRIS
           18C-A]
          Length = 862

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEIQDRLCD 68
            D   +RL  L  + E      +  +   L +E   L              + + +++  
Sbjct: 410 LDEITRRLKQLEIEREAIKREDDTEKIAQLDKEIAELREQEHSFRAKWEGERALVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG- 127
           +   +E    E D     E   N +R+  E+ Y + + L   E D  +   ++ A  GG 
Sbjct: 470 DKQEMENLKYEAD---RAEREGNYERV-AEIRYSRLKQL---EDDIKNIQQQLQATQGGQ 522

Query: 128 --TESQDWANMLLRMYTRW 144
                +   + +  + +RW
Sbjct: 523 AMVREEVTEDDIAEVVSRW 541


>gi|325269262|ref|ZP_08135880.1| chaperone protein ClpB [Prevotella multiformis DSM 16608]
 gi|324988389|gb|EGC20354.1| chaperone protein ClpB [Prevotella multiformis DSM 16608]
          Length = 862

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEIQDRLCD 68
            D   +RL  L  + E      +  +   L +E   L              + + +++  
Sbjct: 410 LDEITRRLKQLEIEREAIKREDDTEKIAQLDKEIAELREQEHSFRAKWEGERALVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG- 127
           +   +E    E D     E   N +R+  E+ Y + + L   E D  +   ++ A  GG 
Sbjct: 470 DKQEMENLKYEAD---RAEREGNYERV-AEIRYSRLKQL---EDDIKNIQQQLQATQGGQ 522

Query: 128 --TESQDWANMLLRMYTRW 144
                +   + +  + +RW
Sbjct: 523 AMVREEVTEDDIAEVVSRW 541


>gi|227510674|ref|ZP_03940723.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227189795|gb|EEI69862.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 652

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           KL+R++  L    D  +  +  + +  +   P ++ ++ +A  L ++     Q +    S
Sbjct: 582 KLNREVTDLESQLDELSKSK--NNIENQMAQPEVFNDLDKASDLQKKLEMVDQEIKETES 639

Query: 58  FIKEIQDRLCDNL 70
             ++   +L D  
Sbjct: 640 KWEQKSLQLEDIE 652


>gi|170290137|ref|YP_001736953.1| formate C-acetyltransferase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174217|gb|ACB07270.1| Formate C-acetyltransferase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 817

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 12  GLFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G+ D  +   +++  L     DP    +    +  M E + +D     I     R  + L
Sbjct: 195 GVLDIKEQIRRKMESL-----DPS---DPEYYEK-MEELKAMDIVADAIMIYARRYAEKL 245

Query: 71  ILLELALEEDDCSILQETSDNLQ 93
              ++A EE D    +E     +
Sbjct: 246 E--QMAKEEKDPERKKELEQMAE 266


>gi|168181276|ref|ZP_02615940.1| protein ClpB [Clostridium botulinum Bf]
 gi|182675393|gb|EDT87354.1| protein ClpB [Clostridium botulinum Bf]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|153939896|ref|YP_001389780.1| clpB protein [Clostridium botulinum F str. Langeland]
 gi|152935792|gb|ABS41290.1| clpB protein [Clostridium botulinum F str. Langeland]
 gi|295317869|gb|ADF98246.1| clpB protein [Clostridium botulinum F str. 230613]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|83643309|ref|YP_431744.1| protein chain release factor B [Hahella chejuensis KCTC 2396]
 gi|83631352|gb|ABC27319.1| Protein chain release factor B [Hahella chejuensis KCTC 2396]
          Length = 139

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 32/142 (22%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---------------------- 255
           S ++ I + +  +   RA GAGGQ+VN   SAV +                         
Sbjct: 5   SNKVSIPDHEIDMQAIRAQGAGGQNVNKVSSAVHLRFDINASSLPEIYKERLLELSDQRI 64

Query: 256 --PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
                +V++ QQ R+Q +N+  A   L+  +      +++ IA            G Q R
Sbjct: 65  TKDGVIVIKAQQYRTQEQNREDALMRLKEVIVAAMATRKKRIATKPTK-------GSQTR 117

Query: 314 SYVLQPYQ-MVKDLRTNIEKTS 334
               +  +  VK  R  + +  
Sbjct: 118 RLEGKTKRAKVKSARGRVSRYD 139


>gi|34304360|ref|NP_694972.3| nephrocystin-3 [Homo sapiens]
 gi|68565783|sp|Q7Z494|NPHP3_HUMAN RecName: Full=Nephrocystin-3
 gi|32478124|gb|AAP83423.1| nephrocystin 3 [Homo sapiens]
 gi|225000052|gb|AAI72279.1| Nephronophthisis 3 (adolescent) [synthetic construct]
          Length = 1330

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 119 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 168

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 169 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 225

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 226 GTQCEYWTG 234


>gi|329955552|ref|ZP_08296460.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
 gi|328525955|gb|EGF52979.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
          Length = 864

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 42/125 (33%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA--------------ISFIKE 61
            D   +++  L  + E      +  + + + +E   L                 ++ I++
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDQPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNKIQQ 469

Query: 62  IQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFES--------LLSGEA 112
            +  + +     + A  E D   + E     LQ +  E+E  Q +         ++  E 
Sbjct: 470 NKVEIENLKFEADKAEREGDYGKVAEIRYGKLQALNQEIEETQQKLHEMQGDKAMIKEEV 529

Query: 113 DSNDA 117
           D+ D 
Sbjct: 530 DAEDI 534


>gi|311030432|ref|ZP_07708522.1| hypothetical protein Bm3-1_07796 [Bacillus sp. m3-13]
          Length = 520

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 15/92 (16%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLILL 73
           D +   + L  L          +N  +A  L++E    +N +   +KE+Q++      L 
Sbjct: 190 DNEGINEELEELKDL-------KNEKDANELLKELMEKENNLAEKMKELQEKED---SLK 239

Query: 74  ELALEEDDCSILQET----SDNLQRIKLEVEY 101
           ELA E+ D S+        ++ L+++  E++ 
Sbjct: 240 ELAKEQPDNSLANLALNKKNEELEKLLKEMKK 271


>gi|281212159|gb|EFA86319.1| ABC transporter family [Polysphondylium pallidum PN500]
          Length = 825

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 31/175 (17%)

Query: 3   LSRQLNCLGG----LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---- 54
           L R+++ L        D +   +R+  +  + E+P    +   A+ L+++   L +    
Sbjct: 301 LRREMDELESQDASSSDMEAICERIGEIMLELEEPD--DSKERAEALLKKLGFLKSMRDG 358

Query: 55  AISFIK-EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           ++S +    + RL   L L      E +   L E +++L          Q  S+L     
Sbjct: 359 SVSALSGGWRARLEMALALF----AEPEILFLDEPTNHLD----LHAVFQLASILRNNHQ 410

Query: 114 SNDAYLEVHAGA------------GGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +    +  H  +             G   Q  A        + AE ++F     E
Sbjct: 411 NMTVIVVSHDASFLDLVSTDILSINGCMLQQMAGNYSAFEEKAAEYKRFHEHIYE 465


>gi|205372354|ref|ZP_03225168.1| ABC transporter ATP-binding protein uup [Bacillus coahuilensis
           m4-4]
          Length = 642

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 18/35 (51%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER 49
           D     +++  L  +  DP +++N  E + +M+E 
Sbjct: 93  DVQELERQIRSLEQQMADPTIYENATEYERVMKEY 127



 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 16/53 (30%), Gaps = 7/53 (13%)

Query: 16  WDNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +    R+  L            DP ++Q+    + L  E       +  + E
Sbjct: 584 LEEVEARIEELEVAIATNEEALCDPEVFQDHEAVQKLTDEINAYKQEVDDLME 636


>gi|194767157|ref|XP_001965685.1| GF22627 [Drosophila ananassae]
 gi|190619676|gb|EDV35200.1| GF22627 [Drosophila ananassae]
          Length = 1385

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL-----LE 74
            +R++ L  +       Q   + +  MR+ Q  +      +E+Q +L +   L     LE
Sbjct: 664 RRRVAELEARQRAEADAQRERDRQEKMRQLQEAEELNRRQQELQRQLKEQQELEKQRRLE 723

Query: 75  LA--LEEDDCSILQE-TSDNLQRIKLEVEYKQFESL 107
           LA    E +  + QE      ++ + E   K+   +
Sbjct: 724 LARIKAEKEEQLRQERLRQEREQREKEQREKELREM 759


>gi|167035036|ref|YP_001670267.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
           putida GB-1]
 gi|166861524|gb|ABY99931.1| Class I peptide chain release factor [Pseudomonas putida GB-1]
          Length = 137

 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIP-------------------- 256
           S  + + ++D  +   RA GAGGQ+VN   SAV +   IP                    
Sbjct: 5   SNNVHLPDADIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASSLPEFYKERLLALRDNRI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           TG   ++++ QQ R+Q +N+A A     A+L EL +   +       +  T    G + R
Sbjct: 65  TGDGVLIIKAQQYRTQDQNRADAL----ARLAELIIAAAKTEKKRRPTKPTL---GSKTR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|121715788|ref|XP_001275503.1| chromosome transmission fidelity factor [Aspergillus clavatus NRRL
           1]
 gi|119403660|gb|EAW14077.1| chromosome transmission fidelity factor [Aspergillus clavatus NRRL
           1]
          Length = 1068

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 24/123 (19%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKEIQDRLCD 68
           L    D D   Q+          P LW N++    LM+E ++ +++ I F+        D
Sbjct: 880 LRASADRDEIRQQYI--------PSLWDNMVR--RLMKEGKESVEDVIEFMDSYFLTRED 929

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF-------------ESLLSGEADSN 115
              L+EL L   D S ++  +            +               + +   + D  
Sbjct: 930 WDALVELGLGPMDESNVKLETQTKATFTRLYNQRSHPLPFIKASSVAVPKKMPKEKPDIE 989

Query: 116 DAY 118
           DA 
Sbjct: 990 DAI 992


>gi|332232173|ref|XP_003265279.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin-3-like [Nomascus
           leucogenys]
          Length = 1330

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 119 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 168

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 169 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 225

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 226 GTQCEYWTG 234


>gi|312218512|emb|CBX98458.1| similar to nuclear condensin complex subunit Smc4 [Leptosphaeria
            maculans]
          Length = 1492

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 27/164 (16%)

Query: 2    KLSRQLNCLGGL------FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
            +L  ++  +GG+         D   Q++  L  +     + ++  + + +  E+ H    
Sbjct: 1087 ELQDRIMEIGGVKLRSQKAKVDGLKQQIDTLTDQASSAEVSKSKEDKQRIKHEKAH---- 1142

Query: 56   ISFIKEIQDRLCDNLILLE-LALEEDDCS----ILQETSDNLQRIKLEVEYKQFESLLSG 110
               IKE++    +   + E +A +  D S      +E  + L+  K E+E       L  
Sbjct: 1143 ADAIKELEKLAIEAEKIEEDMAAQHRDASGIRRQAEEAQEALETQKEELEV------LKK 1196

Query: 111  EADSNDAYL------EVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            E D   A L      E+       E +   +   +    + +K 
Sbjct: 1197 ELDERTAELNETRAAEIEMRNKLDEGKKSLSEFQKKQAYFCDKM 1240


>gi|296446820|ref|ZP_06888758.1| Class I peptide chain release factor [Methylosinus trichosporium
           OB3b]
 gi|296255695|gb|EFH02784.1| Class I peptide chain release factor [Methylosinus trichosporium
           OB3b]
          Length = 139

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 32/137 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPT------------------- 257
           I + ES+ +    R+SGAGGQ+V   ++AV++     H P+                   
Sbjct: 8   IFLDESELQESFMRSSGAGGQNVQKVETAVQLRFDARHSPSLPAPVRARLEKLAGRRLTK 67

Query: 258 --GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
              +V+  Q+ R+Q +N+A A   L      LEL             +T+  +G ++R  
Sbjct: 68  DGVIVITAQRHRTQDRNRADARERL------LELIHAAAAPPPPPRRETKPTYGSKLRRL 121

Query: 316 VLQPYQM-VKDLRTNIE 331
             +  +  VK LR  +E
Sbjct: 122 EGKKIRADVKALRGKVE 138


>gi|237793732|ref|YP_002861284.1| clpB protein [Clostridium botulinum Ba4 str. 657]
 gi|229261258|gb|ACQ52291.1| clpB protein [Clostridium botulinum Ba4 str. 657]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|148378412|ref|YP_001252953.1| ClpA-type chaperone [Clostridium botulinum A str. ATCC 3502]
 gi|148287896|emb|CAL81962.1| heat shock protein [Clostridium botulinum A str. ATCC 3502]
          Length = 866

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I++++++L D    +E A  E
Sbjct: 442 KERLEVLEKELSELK-----EKDKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|296482742|gb|DAA24857.1| dynactin 1 [Bos taurus]
          Length = 1239

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 20/121 (16%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT---KTEDPHLW-----QNVIEAKMLMRE-RQHLD 53
           L  +L  L           +L  L     + E    W     +   + +  ++E R+   
Sbjct: 190 LEEKLETLR--LKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAK 247

Query: 54  NAISFIKEIQDRLCDNLILLELA------LEEDDCSILQETS---DNLQRIKLEVEYKQF 104
            A+   +   + + D    +E+A       EE   S+ QE     + ++ +  ++E  + 
Sbjct: 248 EALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEAEVLRERVEELTTDLEILKA 307

Query: 105 E 105
           E
Sbjct: 308 E 308


>gi|209964856|ref|YP_002297771.1| ABC transporter, ATP-binding protein, putative [Rhodospirillum
           centenum SW]
 gi|209958322|gb|ACI98958.1| ABC transporter, ATP-binding protein, putative [Rhodospirillum
           centenum SW]
          Length = 633

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 7/81 (8%)

Query: 2   KLSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L  QL  L    D          +R + L  +  DP L++    A  + + +  L   +
Sbjct: 550 ELRAQLAPLRRKVDEVEKRLARLTERRNKLEMQLADPKLYEGP--ADKVSKLQIELGTVV 607

Query: 57  SFIKEIQDRLCDNLILLELAL 77
             +   +    D    LE A 
Sbjct: 608 KEVDSAELEWLDLSEQLEQAQ 628


>gi|156935289|ref|YP_001439205.1| peptidyl-tRNA hydrolase domain protein [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156533543|gb|ABU78369.1| hypothetical protein ESA_03146 [Cronobacter sakazakii ATCC BAA-894]
          Length = 140

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTGV 259
           + + + +      RA GAGGQHVN + +A+ +                      H+ T  
Sbjct: 8   VAVPDDEVTFSAIRAQGAGGQHVNKSSTAIHLRFDINASSLPDEWKARLLAASHHLITAE 67

Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
              V++ Q+ RSQ  N+  A   L   + EL   ++    
Sbjct: 68  GVVVIKAQEYRSQEMNREAALARLVMLVRELTATQKRRKE 107


>gi|27545303|ref|NP_775383.1| laminin subunit beta-4 precursor [Danio rerio]
 gi|82243519|sp|Q8JHV6|LAMB4_DANRE RecName: Full=Laminin subunit beta-4; Flags: Precursor
 gi|21538981|gb|AAM61768.1|AF468050_1 laminin beta 4 [Danio rerio]
          Length = 1827

 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 31/162 (19%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +   +L  +    +   A   L  +            +  A+   +E +   +A   +  
Sbjct: 1673 ETEPKLKNIEDHLNLTRAKTLLDEIEALKNKTE----MNRAQ--GKEAKDTADA--ALNS 1724

Query: 62   IQDRLCDNLILLE----LALEEDDCSILQETSDNLQRIK--------------LEVEYKQ 103
              D   D   L E    L L   + ++  E ++ L+ I                E+E  +
Sbjct: 1725 ANDTGKDLEELKEQFEKLKLNSTNQNVSSEANERLKNITMEAENLAKHVEDKMKEIEDLE 1784

Query: 104  FESLLSGE-ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             + LLS E  D     LE        E+ D    ++    R+
Sbjct: 1785 EKILLSNERKDEMRKELEALQ----KEADDLKKFIVDKVQRY 1822


>gi|256273042|gb|EEU08000.1| Gga1p [Saccharomyces cerevisiae JAY291]
          Length = 557

 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 28/161 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKE 61
           + +L  L      D+  +  + L           +   A  + +  E   L        E
Sbjct: 196 AAKLEELLRSGKPDDLKE-ANKLMKIMA--GFKDDTKVAVKQAINNELNKLKRKADLFNE 252

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +         +   +QE   +L+  + +     F+ L+  E D  DA +  
Sbjct: 253 MLTSADEPDL---------ENETIQELYGDLKSAQPK-----FKKLIEEERDD-DALV-- 295

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                 +    + ++++++  R+   +  K E L + D  E
Sbjct: 296 ------SNLSKFNDLVIQLLKRYKSIKGMKEEELNVPDTNE 330


>gi|189525967|ref|XP_693885.3| PREDICTED: sorting nexin-29-like [Danio rerio]
          Length = 823

 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 20/70 (28%)

Query: 2   KLSRQLNCLGGLFD------------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER 49
           +L+ Q   L GL D             D   +RL+ L  +           + + LMRE 
Sbjct: 489 ELTEQNTSLRGLLDGEMEHSAGLRQEVDGLKKRLAELEERHA--------AKVQALMREN 540

Query: 50  QHLDNAISFI 59
           + L   +   
Sbjct: 541 EVLKVQLKKY 550


>gi|324508117|gb|ADY43430.1| Sodium-coupled neutral amino acid transporter 10 [Ascaris suum]
          Length = 706

 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 38/215 (17%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQD--RLCDNLILLELALEEDDCSILQETSDNLQR-- 94
             +   +  E+  L       KE +   +L D   L+   L E D    +E      R  
Sbjct: 454 PKQLIDIGEEKNSLKAPEGTFKENESAGKLNDTERLIGEKLGEKDIERKKEEIGEEARKI 513

Query: 95  -IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
             +++ + ++ + ++                    E Q     L        E  KF  E
Sbjct: 514 LAEMKEQRREQDKMIK-------------------EQQKIVRELN-------EHHKFHVE 547

Query: 154 ALEIHDGEEAGI-------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
                  E           +   +L KG +A    K E    +       ++    +   
Sbjct: 548 EEHKRTAELPMTINGSVYREEKNILGKGSDAKMIGKREPKEIKRREAPNEEAEVSINAET 607

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + +     V++  ++ I      I+  R S  G Q
Sbjct: 608 NKVRRRKDVNEKSQLHIEGKTQDIERSRVSNVGTQ 642


>gi|317047591|ref|YP_004115239.1| ABC transporter-like protein [Pantoea sp. At-9b]
 gi|316949208|gb|ADU68683.1| ABC transporter related protein [Pantoea sp. At-9b]
          Length = 637

 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 7/68 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQ----HLDNAI 56
            L+R+L  L      +    R+  L  +   P  +     + + ++         L+ A 
Sbjct: 567 NLTRELEQLPQ--KLEQLESRIGELQAQMSHPDFFSQPHDKTQPVLDALAQTEQELETAF 624

Query: 57  SFIKEIQD 64
              +E++ 
Sbjct: 625 ERWEELEA 632


>gi|297582875|ref|YP_003698655.1| ABC transporter-like protein [Bacillus selenitireducens MLS10]
 gi|297141332|gb|ADH98089.1| ABC transporter related protein [Bacillus selenitireducens MLS10]
          Length = 642

 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R++  +      +    R+  + ++   P ++Q+  E+  L  E + L +A+  + +  +
Sbjct: 581 RRIEEIEST--VEGHESRVEEIESELIKPEVFQDHEESARLQTELESLQDALETLMDEWE 638

Query: 65  RLCD 68
            L D
Sbjct: 639 ALQD 642


>gi|322712149|gb|EFZ03722.1| myosin class II heavy chain (MHC), putative [Metarhizium anisopliae
            ARSEF 23]
          Length = 2286

 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 16   WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD-RLCDNLILL- 73
                 QR+  L           +   A  + +     D+ IS+++E+   R  D   ++ 
Sbjct: 2022 LQAREQRIEELEQSLSK----SDPDAAAKISKR----DDEISWLRELLAVRHSDLQDIIS 2073

Query: 74   ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
             L+ +  D   +++ +  L R  L++E ++ E  L+G
Sbjct: 2074 ALSGDHYDRDTIKDAAIRL-RANLQMEEQERERALNG 2109


>gi|123497615|ref|XP_001327219.1| Formin Homology 2 Domain containing protein [Trichomonas vaginalis
           G3]
 gi|121910145|gb|EAY14996.1| Formin Homology 2 Domain containing protein [Trichomonas vaginalis
           G3]
          Length = 1322

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 35  LWQNVIEAKMLMRER----QHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQE 87
               +I  +   +E     + L + +   K    ++    D   L E  L + D  + ++
Sbjct: 579 FKDEIINLQSQNKELLANCKALQDVVELEKSQPGVKVSEEDVKSLKENKLLKHDLEMKEK 638

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  L +   E++  + E L    +++ +  +E+ +
Sbjct: 639 ENSELTKQNAELKD-ELEKLKKELSEAKNKIIEIES 673


>gi|298345317|ref|YP_003718004.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC
           43063]
 gi|298235378|gb|ADI66510.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 43063]
          Length = 560

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 7/65 (10%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCD 68
            G+++  + + R + ++ +  DP       +   LM E   L  AI      ++  +L  
Sbjct: 91  EGVWEIKSKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145

Query: 69  NLILL 73
            +  L
Sbjct: 146 AMDAL 150


>gi|223044463|ref|ZP_03614494.1| vga protein [Staphylococcus capitis SK14]
 gi|222442152|gb|EEE48266.1| vga protein [Staphylococcus capitis SK14]
          Length = 645

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +     +S++ T+   P ++ + ++A  L  E+ +    L+  +   +E+Q++L
Sbjct: 591 IEEFETHISYIETQLTQPEVFNDPMKAAELAEEKNNTEQKLEQVMLEWEELQEKL 645


>gi|296536878|ref|ZP_06898924.1| peptidyl-tRNA hydrolase domain protein [Roseomonas cervicalis ATCC
           49957]
 gi|296262795|gb|EFH09374.1| peptidyl-tRNA hydrolase domain protein [Roseomonas cervicalis ATCC
           49957]
          Length = 142

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 31/124 (25%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPT--------------------- 257
           I ES+      RASGAGGQ++   ++ V++     H P+                     
Sbjct: 12  IDESELEESFARASGAGGQNIQKVETMVQLRFDARHSPSLPEPVRERLLKLAGHRATAAG 71

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
            VV+  QQ R+Q +N+  A   +      LEL +        +   T+   G + R    
Sbjct: 72  EVVITAQQFRTQARNREDALERM------LELIREAAKPPPPKRRATKPTLGSKKRRLEG 125

Query: 318 QPYQ 321
           +  +
Sbjct: 126 KSQR 129


>gi|254502936|ref|ZP_05115087.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
 gi|222439007|gb|EEE45686.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
          Length = 628

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 10/76 (13%)

Query: 4   SRQLNCLGGLFDWDNAV-----QRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAI- 56
             QL  L    D          Q+++ ++    DP  +Q +   A    +ER   +  + 
Sbjct: 552 RSQLKPLRQKIDAAEKEMTRLQQKIAKIDDMLADPEFFQTDPNRAAKFAKERAFCEKKLV 611

Query: 57  ---SFIKEIQDRLCDN 69
                  E+     + 
Sbjct: 612 KTEEEWLELSAEFEEA 627


>gi|116873510|ref|YP_850291.1| ABC transporter, ATP-binding protein [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116742388|emb|CAK21512.1| ABC transporter, ATP-binding protein [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 650

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +   P ++QN  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTKPEIFQNHEKALEITQELDVIKANGESLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 ETVSEELESM 650


>gi|224107285|ref|XP_002314433.1| predicted protein [Populus trichocarpa]
 gi|222863473|gb|EEF00604.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 22  RLSFLNTKTEDPHLWQNVI---EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE--LA 76
           R   L  + ++   W N      A+ L +++  L +     +E++    + L+L E  + 
Sbjct: 411 RAQELQNQLQEWTEWANQKVMQAARRLGKDKAELKSLRHEKEEVERLKKEKLVLEESTMK 470

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES 106
              +  + L + S  ++R    V   + E+
Sbjct: 471 KLTEMENALCKASGKVERANSAVRRLEVEN 500


>gi|169335018|ref|ZP_02862211.1| hypothetical protein ANASTE_01424 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257756|gb|EDS71722.1| hypothetical protein ANASTE_01424 [Anaerofustis stercorihominis DSM
           17244]
          Length = 382

 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 16/88 (18%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N V++L  +  +           +   + +E++ L++ IS +   +D L    I      
Sbjct: 155 NIVKKLQDVEKQI--------QTKTDKIAKEKKELEDLISKLNSNKDDLDTLKIAK---- 202

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFE 105
                + L     +++ +K EVE  + E
Sbjct: 203 ----NAQLANVKGDIKDLKKEVEKLEAE 226


>gi|308159588|gb|EFO62115.1| Hypothetical protein GLP15_1951 [Giardia lamblia P15]
          Length = 1434

 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 17/133 (12%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN------- 54
            +L +++  L     ++  + +   L  ++   +  Q+      L+R +  L         
Sbjct: 1221 ELKKKIESLKVDLKFEEMLTKSELLRQQSAAENAVQDQ-RLDELLRLQTELRQREGEEKV 1279

Query: 55   AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL------ 108
             I  ++E + ++ D +   E A  ++   IL+     L   + +V  K+ E LL      
Sbjct: 1280 LILELEEARRKIADLVHTRETADIDEYDIILKHCYTVLGGDETDVPEKRKELLLMLQKQC 1339

Query: 109  ---SGEADSNDAY 118
               S E D N+ Y
Sbjct: 1340 IAVSTEYDLNNPY 1352


>gi|5880614|gb|AAD54769.1|AF120932_1 SMC-like protein [Arabidopsis thaliana]
 gi|5880616|gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana]
          Length = 1055

 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 36/74 (48%), Gaps = 9/74 (12%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNL-------ILLELALEE--DDCSILQETSDNLQ 93
           + +M++ + +D   +F++++Q+ L +          L E   E    +    +E  + L+
Sbjct: 718 REIMKDLEEIDEKEAFLEKLQNCLKEAELKANKLTALFENMRESAKGEIDAFEEAENELK 777

Query: 94  RIKLEVEYKQFESL 107
           +I+ +++  + E +
Sbjct: 778 KIEKDLQSAEAEKI 791


>gi|326333237|ref|ZP_08199484.1| putative ABC transporter, ATP-binding protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325948881|gb|EGD40974.1| putative ABC transporter, ATP-binding protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 597

 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--DDCSILQETSDNLQRIKL 97
            +AK    E +     I+ I +  +R+ +    LELA+ E  +D + L E S  L ++  
Sbjct: 521 AKAKPGSAEERAAKKVIARIDKQLERIGEQQQKLELAMAEAVNDYTRLAELSAELDQLAA 580

Query: 98  EVEYKQFESL 107
           E +  + E L
Sbjct: 581 EKDDLELEWL 590


>gi|312131267|ref|YP_003998607.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM
           17132]
 gi|311907813|gb|ADQ18254.1| hypothetical protein Lbys_2592 [Leadbetterella byssophila DSM
           17132]
          Length = 1080

 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 8/92 (8%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D D  +Q+   LN + +D    +N    + L+ ++   +       ++Q ++     +L 
Sbjct: 544 DLDRLLQKKEELNKEIQD---LKNQ--LQELLEKQSRFEQQSP---QLQQKMEMIQKMLN 595

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
             +E  D  +L+E    +++   E    Q E 
Sbjct: 596 ELMESKDSKVLEELKKMMEKSLDEKSLDQLEK 627


>gi|293408284|ref|ZP_06652124.1| yaeJ protein [Escherichia coli B354]
 gi|291472535|gb|EFF15017.1| yaeJ protein [Escherichia coli B354]
          Length = 140

 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  I I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNIAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ R+Q  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRNQELNREAALARLVAVIKDLTTEQKAR 105


>gi|73990082|ref|XP_542785.2| PREDICTED: similar to nephronophthisis 3 isoform 2 [Canis
           familiaris]
          Length = 1335

 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 125 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 174

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 175 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 231

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 232 GTQCEYWTG 240


>gi|186686372|ref|YP_001869568.1| peptidyl-tRNA hydrolase domain protein [Nostoc punctiforme PCC
           73102]
 gi|186468824|gb|ACC84625.1| Class I peptide chain release factor [Nostoc punctiforme PCC 73102]
          Length = 138

 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 24/91 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---------------------- 255
           S ++ I +SD  I   R+ GAGGQ+VN   +A+ +                         
Sbjct: 5   SNKVIIPQSDIEISAIRSQGAGGQNVNKVSTAIHLRFDIIASSLPDYYKEQLLKLNDRRI 64

Query: 256 -PTGVVV-QCQQERSQHKNKAQAWNMLRAKL 284
              GVVV + Q+ RSQ  N+  A   L+  +
Sbjct: 65  TQEGVVVIKAQEHRSQENNRESALKRLQELI 95


>gi|323309671|gb|EGA62879.1| Gga1p [Saccharomyces cerevisiae FostersO]
          Length = 557

 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 28/161 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKE 61
           + +L  L      D+  +  + L           +   A  + +  E   L        E
Sbjct: 196 AAKLEELLRSGKPDDLKE-ANKLMKIMA--GFKDDTKVAVKQAINNELNKLKRKADLFNE 252

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +         +   +QE   +L+  + +     F+ L+  E D  DA +  
Sbjct: 253 MLTSADEPDL---------ENETIQELYGDLKSAQPK-----FKKLIEEERDD-DALV-- 295

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                 +    + ++++++  R+   +  K E L + D  E
Sbjct: 296 ------SNLSKFNDLVIQLLKRYKSIKGMKEEELNVPDTNE 330


>gi|321465343|gb|EFX76345.1| hypothetical protein DAPPUDRAFT_128926 [Daphnia pulex]
          Length = 608

 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 28/232 (12%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLM-RERQHLDNAISFIKE--------IQDRLC 67
           +  ++R S  N    +        + +    RE+  L+  +   +E        ++    
Sbjct: 319 EEKLRRQSERNKLARE-------KQLRETAEREKAALEQQLIHFQEEFRVANEQLRRSEE 371

Query: 68  DNLILLELALEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSG----EADSNDAY 118
              +L E A   ++ S+L      +    LQRI+L     + E LLS     EA    + 
Sbjct: 372 SAELLAEKARVAEEESMLLTQKASDAEQELQRIRLSAMKTEEEKLLSQRQLHEAKQIASR 431

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           L  ++     E++     LL+   R+AE + K K                A L I   N 
Sbjct: 432 LLENSERCAAEAEQLKGDLLQA--RYAETQAKKKLLEFLTTQATSLPAYEARLPIPLANQ 489

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
              L    G+     +S   ++   ++S +   +     + + +EI +    
Sbjct: 490 LTGLTNLTGLSSSGYLSAIAASELVNSSANYDLMTHGDMEQLSLEIEKERVE 541


>gi|316974837|gb|EFV58309.1| ATP-dependent RNA helicase abstrakt [Trichinella spiralis]
          Length = 1902

 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 18/129 (13%)

Query: 3   LSRQLNCLGG--------LFDWDNAVQRLSFLNT---KTEDPHLWQNVIEAKMLMRERQH 51
           LS +L  L          L D++    +L  L     +     +   +     L + ++ 
Sbjct: 276 LSEKLETLRAKRHEDKQKLIDYERCKIQLQQLTEYKNRMV--EVHSELQR--QLQQAKKE 331

Query: 52  LDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETS-DNLQRIKLEVEYKQFES-LL 108
              AI   +   + +      +E+A L+++      E     L  +K  V   + E  +L
Sbjct: 332 AREAIESREAYSEEMAGVSEAIEMATLDKEMAEERAEMLCQELDVVKDRVRELEVELEIL 391

Query: 109 SGEADSNDA 117
             E ++N A
Sbjct: 392 KNELNANGA 400


>gi|254488188|ref|ZP_05101393.1| ABC transporter, ATP-binding protein [Roseobacter sp. GAI101]
 gi|214045057|gb|EEB85695.1| ABC transporter, ATP-binding protein [Roseobacter sp. GAI101]
          Length = 603

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 9/75 (12%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEI 62
             +L  L    +       ++ L     DP L+  N ++ +         D  I   +++
Sbjct: 536 KHRLEALPA--EIARLEAEIAKLEELMSDPTLYSDNPVKFQKAT------DALIERNEKL 587

Query: 63  QDRLCDNLILLELAL 77
           QD   + L+L E A 
Sbjct: 588 QDAEAEWLVLEEKAE 602


>gi|304394125|ref|ZP_07376048.1| ATP-dependent chaperone protein ClpB [Ahrensia sp. R2A130]
 gi|303293565|gb|EFL87942.1| ATP-dependent chaperone protein ClpB [Ahrensia sp. R2A130]
          Length = 884

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             RL  L     D        +A+ L  +     + +S  ++++++L      LE+A  E
Sbjct: 439 KDRLEKLEADLSDLE-----DKAQELSAKWMSEKDKLSSARDLKEKLDHARSELEIAQRE 493

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            +     E S   + +++ ++   +
Sbjct: 494 GNLGRAGELSYGEIPQLERQIAEAE 518


>gi|154251352|ref|YP_001412176.1| ABC transporter-like protein [Parvibaculum lavamentivorans DS-1]
 gi|154155302|gb|ABS62519.1| ABC transporter related [Parvibaculum lavamentivorans DS-1]
          Length = 599

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 17/79 (21%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIK 60
           +L  ++             + +  +  K  DP L+  +       M     L   ++   
Sbjct: 533 ELQTRM---------PELAREIENVEKKLADPDLYARDPELFHKTMTRHDALKAELAS-- 581

Query: 61  EIQDRLCDNLILLELALEE 79
                  ++ + LE+  EE
Sbjct: 582 -----AEEHWLELEMKREE 595


>gi|301781764|ref|XP_002926297.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin-3-like [Ailuropoda
           melanoleuca]
          Length = 1330

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 120 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 169

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 170 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 226

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 227 GTQCEYWTG 235


>gi|198436519|ref|XP_002130218.1| PREDICTED: similar to cytospin A [Ciona intestinalis]
          Length = 1059

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 19/129 (14%)

Query: 2   KLSRQ-LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +L +Q +  L          + ++    +  +         A+ L    +HL+  ++   
Sbjct: 387 ELKQQYVVLLNEREKLLQVQESITE-EVRIAEQARKDQQELAEALRERLRHLERELTHAH 445

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
             + RL   L  ++   EE+   ++Q   D L+  + +VE                  L 
Sbjct: 446 TAKSRLEKKLKEVKDEAEEEQSEVVQRLEDELKEERKKVEE-----------------LV 488

Query: 121 VHAGAGGTE 129
           +  G+ G E
Sbjct: 489 IRGGSNGEE 497


>gi|170761667|ref|YP_001785749.1| clpB protein [Clostridium botulinum A3 str. Loch Maree]
 gi|169408656|gb|ACA57067.1| clpB protein [Clostridium botulinum A3 str. Loch Maree]
          Length = 866

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +  +        + K +  + ++  + I+ I+++++RL D    +E A  E
Sbjct: 442 KERLEVLERELSELK-----EKDKEMTAKYENEKSHITKIRDLKERLDDVRGQMEKAERE 496

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D + + E     +  ++ E+E K+
Sbjct: 497 YDLNKVAELKYGLIPALQREIEEKE 521


>gi|29377005|ref|NP_816159.1| hypothetical protein EF2516 [Enterococcus faecalis V583]
 gi|29344471|gb|AAO82229.1| membrane protein, putative [Enterococcus faecalis V583]
          Length = 681

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E + +  E + L + +   +++ D   DN      +LEE D  +L ET  +      
Sbjct: 510 DNEELEEI--EDKALTDEVDNFEDLTDDEMDN------SLEEIDVPVLDETVSDSDTSLA 561

Query: 98  EVEYKQFESLLSGEADSNDAYLE 120
           +    + E ++  E DS D+ +E
Sbjct: 562 DESNIELEPIIENELDSLDSSVE 584


>gi|159109360|ref|XP_001704945.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803]
 gi|157433021|gb|EDO77271.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803]
          Length = 693

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 55/140 (39%), Gaps = 12/140 (8%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73
           D +  V R+  L T+ +D +       A  +++ER  LD  +  +   I     +   L+
Sbjct: 330 DLEQKVARIHALETRIQDMN-----QAATSMIKERADLDTLVQSLNATITSLQEELDSLI 384

Query: 74  ELALEEDDCSILQE--TSDNLQRIKLEV-EYKQFESLLSGEADSNDAYL---EVHAGAGG 127
               ++++  +++       +Q+   +V +  Q  + L+      +  L      AGA  
Sbjct: 385 AAGKKQEEKHLVEMSDIRGAMQKAVEDVNKQDQENAQLNDRIHELEEALNEARRRAGAAE 444

Query: 128 TESQDWANMLLRMYTRWAEK 147
           +E+      L+ +  +  E 
Sbjct: 445 SEANYIKAELMGLSEKLKEY 464


>gi|330793458|ref|XP_003284801.1| hypothetical protein DICPUDRAFT_148600 [Dictyostelium purpureum]
 gi|325085295|gb|EGC38705.1| hypothetical protein DICPUDRAFT_148600 [Dictyostelium purpureum]
          Length = 1118

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 42/97 (43%), Gaps = 16/97 (16%)

Query: 1   MKLSRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L + L+ L    + +D   ++L+ LN             + + L + R+ L+  ++ I
Sbjct: 585 VQLEQTLSLLKEKTELYDEQREQLNQLNDDL--------QEKQQELEKNRKELEFLLASI 636

Query: 60  KEIQDRLCDNL-ILLELALEEDDCSILQETSDNLQRI 95
           + I+    D    L  +A       ++ E+   ++++
Sbjct: 637 ESIKQNRSDVKNQLATIAK------LINESKAEIKQL 667


>gi|323488873|ref|ZP_08094112.1| ABC transporter ATP-binding protein [Planococcus donghaensis
           MPA1U2]
 gi|323397436|gb|EGA90243.1| ABC transporter ATP-binding protein [Planococcus donghaensis
           MPA1U2]
          Length = 644

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 15/34 (44%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
             +L  L  +  +P ++ N  E   +M+E   L 
Sbjct: 98  EAKLRHLEAQMANPDVYNNPEENNKVMKEYDLLQ 131


>gi|322375292|ref|ZP_08049805.1| ABC transporter, ATP-binding protein [Streptococcus sp. C300]
 gi|321279555|gb|EFX56595.1| ABC transporter, ATP-binding protein [Streptococcus sp. C300]
          Length = 633

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
             EA+ LMR+ ++L+  I  ++     +       E  LE +D   L E    + +I   
Sbjct: 565 QKEARKLMRQIENLEAEIEELESQSQAIS------EQMLETNDAEKLMELQAEMDKISHR 618

Query: 99  VEYKQFE 105
            E    E
Sbjct: 619 QEEAMLE 625


>gi|240276306|gb|EER39818.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 1031

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 37/88 (42%), Gaps = 14/88 (15%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R+  L  + +           + +  E Q L       +E   RL D+   L L
Sbjct: 144 LEKKLERVETLEEEVQ---------RLQGVEAELQELRKV----EESNQRLRDSNEHLRL 190

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            L++ D + + E  + + +++ +++  +
Sbjct: 191 ELDKRDQA-VNEAVELICQLEAKIDALE 217


>gi|156386496|ref|XP_001633948.1| predicted protein [Nematostella vectensis]
 gi|156221025|gb|EDO41885.1| predicted protein [Nematostella vectensis]
          Length = 1752

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 9/91 (9%)

Query: 18   NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                R+  L+       L +   E + + +E   L   +  + EI+  + +     EL  
Sbjct: 1590 QLQTRIDELDR--AHADLRETAEEVQRIKKENASLKAQVKELGEIRRSVSELKG--ELV- 1644

Query: 78   EEDDCSILQETSDNLQRIKLEVE-YKQFESL 107
               +   L+E    LQR++  +    Q + +
Sbjct: 1645 ---EAEALKEKFIQLQRVERALRNDLQIQKM 1672


>gi|87120298|ref|ZP_01076193.1| ABC transporter, ATP-binding protein [Marinomonas sp. MED121]
 gi|86164401|gb|EAQ65671.1| ABC transporter, ATP-binding protein [Marinomonas sp. MED121]
          Length = 640

 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 11/84 (13%)

Query: 2   KLSRQLNCLGGLFDWDNA-----VQRLSFLNTKTEDPHLWQ--NVIEAKMLM----RERQ 50
           +L +QL  L  L +          ++L  ++ K  D  L+   N  + + L+    + ++
Sbjct: 557 ELRQQLRPLRKLVEKHEKAVHKAQEKLDEISEKMADADLYDVTNKDKLQALLTDEAKWKK 616

Query: 51  HLDNAISFIKEIQDRLCDNLILLE 74
            LD       E Q+ L +    +E
Sbjct: 617 ELDENEEAWFEAQESLEEAESSIE 640


>gi|312880801|ref|ZP_07740601.1| ABC transporter related protein [Aminomonas paucivorans DSM 12260]
 gi|310784092|gb|EFQ24490.1| ABC transporter related protein [Aminomonas paucivorans DSM 12260]
          Length = 659

 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 3/71 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKE 61
           L  +L+ +           R + +     DP +  +    + LM+E + L  ++    +E
Sbjct: 590 LQDRLDPVERA--IGEEEARKTQVEALLCDPAVLGDSSRVQDLMKELRLLQESLKTRYEE 647

Query: 62  IQDRLCDNLIL 72
            +    +   +
Sbjct: 648 WEALSLEMEAI 658


>gi|325286233|ref|YP_004262023.1| hypothetical protein Celly_1326 [Cellulophaga lytica DSM 7489]
 gi|324321687|gb|ADY29152.1| hypothetical protein Celly_1326 [Cellulophaga lytica DSM 7489]
          Length = 1158

 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 46/114 (40%), Gaps = 4/114 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  +LN +    + D   +RL  L    ++    +N+ +   L ++    +      ++
Sbjct: 595 KLLEELNKVADKINKDQLTKRLEELGKSQKNSE--RNLEQLLELTKKYYVTEKLAQLAQD 652

Query: 62  IQDRLCDNLILLELALEEDDCSILQE-TSDNLQRIKLEVEYKQFESL-LSGEAD 113
           ++       +L EL  +++     QE  +   + +  E++  + ++  L    D
Sbjct: 653 LEKLAEKQEVLSELKQDQNFEKEEQEKLNKAFEDLTKELDELEKDNQKLQKPLD 706


>gi|291522361|emb|CBK80654.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Coprococcus catus GD/7]
          Length = 645

 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + +  +      D    RL  L+       ++ NV     + +E++ LD     + E
Sbjct: 579 QLKKTMERI------DAIDARLKELDELLVQEDVYTNVSRLMEINKEKEALDEEQLTLME 632

Query: 62  IQDRLCDNLILLE 74
           + + L  +   L+
Sbjct: 633 LWEELEGDDDSLD 645


>gi|55960432|emb|CAI13033.1| utrophin [Homo sapiens]
 gi|57162339|emb|CAI40389.1| utrophin [Homo sapiens]
 gi|57162441|emb|CAI40503.1| utrophin [Homo sapiens]
          Length = 988

 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 16/97 (16%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  +N +      W ++         R HL+ +      +   L + +  L +  E
Sbjct: 84  LQHRLDDMNQR------WNDLKA--KSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDE 135

Query: 79  E--------DDCSILQETSDNLQRIKLEVEYKQFESL 107
           E         D   LQ   D+ + ++ E++ K++  L
Sbjct: 136 ELKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVL 172


>gi|225570035|ref|ZP_03779060.1| hypothetical protein CLOHYLEM_06131 [Clostridium hylemonae DSM
           15053]
 gi|225161505|gb|EEG74124.1| hypothetical protein CLOHYLEM_06131 [Clostridium hylemonae DSM
           15053]
          Length = 646

 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 42/95 (44%), Gaps = 10/95 (10%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI--KEIQDRLCDNLI- 71
           D  +  +R+  ++   +   L  +  +A  L+  R+ L+   +    +++  R+ DN   
Sbjct: 221 DISDLDERIDEIDKNIQ--ELLDD--KAGKLLGARKRLEELSNNFDVRKMAARVDDNKED 276

Query: 72  ---LLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
              L     E+D  + L+E+ ++ +   +  E ++
Sbjct: 277 YYILCGWMGEDDVAAFLKESENDDKVFVVVEEDRE 311


>gi|292611614|ref|XP_002661165.1| PREDICTED: LOW QUALITY PROTEIN: c-Jun-amino-terminal
           kinase-interacting protein 3 [Danio rerio]
          Length = 1310

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 12/115 (10%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLI---LLELALEEDDCSILQETSDNLQRIKLEV 99
           + +++E   L   ++ ++ +   L +N      LEL  E+++  I Q   +   R + E 
Sbjct: 43  EEVVKELMPL--VVNVLENLDSVLTENQEHEVELELLKEDNEQLITQYEREKALRKQAEE 100

Query: 100 EYKQFESLLSGEADSND-----AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++ +FE  L  EAD  D       LE+ A     +S+++A+ + R+  R ++ +K
Sbjct: 101 KFIEFEDAL--EADKKDLQTTVETLELQAKQLELKSKNYADQISRLEERESDMKK 153


>gi|281338301|gb|EFB13885.1| hypothetical protein PANDA_015931 [Ailuropoda melanoleuca]
          Length = 1319

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 109 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 158

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 159 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 215

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 216 GTQCEYWTG 224


>gi|156552335|ref|XP_001601632.1| PREDICTED: similar to hCG1811879 [Nasonia vitripennis]
          Length = 4798

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 19   AVQRLSFLNTKTEDPHLWQNVIEAKM-LMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             + R+  L  ++          +A+  L +E + L+     ++E+  +    +   +   
Sbjct: 3584 KIDRVQELEAES---------EKARKALDKEERELEKVEKQLQELNAKYEKAMTERQSLQ 3634

Query: 78   EEDDCSILQETSDN--LQRIKLEVEYKQFES-LLSGEADSN--DAYLE--VHAGAGGTES 130
            EE D    +  + +  +  +  E E  + E   L  E      +  L     A  G    
Sbjct: 3635 EETDLLQRRLVAADKLIGGLSSENERWKMELEALKNELGKTVGNCLLSSGFLAYNGPFTY 3694

Query: 131  QDWANMLLRMYTRWAEKRK------FKTEALEIHDGEEAGIKS 167
            +    ML   + +   ++       FK E+   +D E +G  S
Sbjct: 3695 EFRTEMLYNDWLQSVLEKGIPLSQPFKIESQLSNDVEISGWNS 3737


>gi|153001724|ref|YP_001367405.1| chaperone protein TorD [Shewanella baltica OS185]
 gi|166988092|sp|A6WRA3|TORD_SHEB8 RecName: Full=Chaperone protein torD
 gi|151366342|gb|ABS09342.1| cytoplasmic chaperone TorD family protein [Shewanella baltica
          OS185]
          Length = 209

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 8  NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            L  LF  +   QRL  L ++      W      + L  E   L  ++  I+   + + 
Sbjct: 15 QLLSSLFAREVDEQRLKELTSEAAQ-QFW------EQLSLE-AKLTQSVDKIRSTLNGIK 66

Query: 68 DNLILLELALE 78
          D+  LLELA +
Sbjct: 67 DDETLLELAAD 77


>gi|168701482|ref|ZP_02733759.1| hypothetical protein GobsU_18290 [Gemmata obscuriglobus UQM 2246]
          Length = 140

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 46/137 (33%), Gaps = 41/137 (29%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITH--------IPTG-------------- 258
           I I++ +      R+ G GGQ+VN   S   +          IP G              
Sbjct: 8   ISIADDEFEWSFARSGGPGGQNVNKVASKAVLRWKAAATAAAIPPGAKARMPVLFPSRFT 67

Query: 259 ----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
               VV+Q Q  R Q +NK          L +L    R  +       KT++  G + R 
Sbjct: 68  TEGDVVIQSQATRDQERNKEDC-------LLKLAEMVRAALVEPVVRKKTKVSKGAKKR- 119

Query: 315 YVLQPYQMVKDLRTNIE 331
                   V D R N E
Sbjct: 120 -------RVADKRRNSE 129


>gi|296237485|ref|XP_002763768.1| PREDICTED: nephrocystin-3 [Callithrix jacchus]
          Length = 1315

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 104 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 153

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 154 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 210

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 211 GTQCEYWTG 219


>gi|299821508|ref|ZP_07053396.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
 gi|299817173|gb|EFI84409.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
          Length = 650

 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA----KMLMRERQHLDNAIS 57
           KL R+L  +    + +    ++S L +   +P ++Q+  +       L +++Q  +  + 
Sbjct: 583 KLERRLTEIEK--ELEKTEAQISELESLLTEPTVYQDHEKVYEVNTQLEQQKQAAEKWME 640

Query: 58  FIKEIQDRLC 67
             +E+ + L 
Sbjct: 641 EWEEVSENLE 650



 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                ++L  +  K  DP +  N  + + L+++   L 
Sbjct: 94  LQQMERQLREIELKIADPEIISNEAQFQSLLKQYDELQ 131


>gi|327352624|gb|EGE81481.1| SPX domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 806

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 69/212 (32%), Gaps = 45/212 (21%)

Query: 13  LFDWDNAVQRLSFLNTK------TED--PHLWQNVIEAKMLMRER--QHLDNA----ISF 58
             D+    Q L    T+      + D  P  W +  E +  ++E     LD      ++ 
Sbjct: 19  YIDYKKLKQLLREHETRDGSQDGSSDESPE-WTDQDE-ETFVQELINVQLDKVNAFQVNT 76

Query: 59  IKEIQDRLCDNLILLELALEEDD-----------CSILQETSDNLQRIKLEVEYKQ---- 103
            K+++DR  D    LE  + +DD               +    +L  I  E+   +    
Sbjct: 77  YKQLRDRTSDCEAKLEPLVVKDDGSHQVKDPDQRRETAESAMKDLDAITKELSELEKFSR 136

Query: 104 --FESLLS--GEADSN-------DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             F   L    + D            L+V        S+D++ +L R+ T ++  R+   
Sbjct: 137 INFTGFLKAAKKHDRKRGTRYKVRPLLQVRLSQLPFNSEDYSPLLYRLSTMYSFIRQNLG 196

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
                   E A      L   G +AY   K  
Sbjct: 197 HIGHEQSTEGAPAVDVHL---GQDAYTSHKFW 225


>gi|326432711|gb|EGD78281.1| LIM domain-containing protein 2 [Salpingoeca sp. ATCC 50818]
          Length = 946

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 21/131 (16%)

Query: 17  DNAVQRLSFLNTKT-EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC-------- 67
           D   QR+  L  K      +       + L +E++ L +A   I +++ ++         
Sbjct: 506 DELKQRVKELEKKVGAQEDVT------QQLKKEQKALADAGQTIAQLRGKVDKLSAQSTK 559

Query: 68  ----DNLILLELAL-EEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEV 121
               D+  L ++   E    S   E  + L R K L+ E ++   LL    +S  A    
Sbjct: 560 TASQDDSHLKQMQKLEATLISTKAELREALSREKTLQAENERLHRLLDAAKESKPAAPTK 619

Query: 122 HAGAGGTESQD 132
                G ++ D
Sbjct: 620 KHAIAGLDAGD 630


>gi|15240258|ref|NP_200954.1| MIM (hypersensitive to MMS, irradiation and MMC); ATP binding
           [Arabidopsis thaliana]
 gi|10177176|dbj|BAB10445.1| SMC-like protein [Arabidopsis thaliana]
 gi|332010088|gb|AED97471.1| protein MIM [Arabidopsis thaliana]
          Length = 1057

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 36/74 (48%), Gaps = 9/74 (12%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNL-------ILLELALEE--DDCSILQETSDNLQ 93
           + +M++ + +D   +F++++Q+ L +          L E   E    +    +E  + L+
Sbjct: 720 REIMKDLEEIDEKEAFLEKLQNCLKEAELKANKLTALFENMRESAKGEIDAFEEAENELK 779

Query: 94  RIKLEVEYKQFESL 107
           +I+ +++  + E +
Sbjct: 780 KIEKDLQSAEAEKI 793


>gi|332828409|gb|EGK01118.1| chaperone ClpB [Dysgonomonas gadei ATCC BAA-286]
          Length = 863

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN--------------AISFIKE 61
            D   +R+  L  + E      + ++ + L +E   L +               I+ I++
Sbjct: 411 LDEKSRRIKQLEIEREAIRRENDKLKEQELSKEISRLKDEEKDLKAKWQSEREVINKIQQ 470

Query: 62  IQDRLCDNLILLELALEEDD----CSI----LQETSDNLQRIKLEVEYKQ-FESLLSGEA 112
            +  + +     E A  E D      +    L+E  D + +++ ++   Q  ++++  E 
Sbjct: 471 NKIEIENTKFEAEKAEREGDYGKVAELRYGKLKELEDGIGKLQGQLHEMQGNQAMIKEEV 530

Query: 113 DSNDA 117
           DS D 
Sbjct: 531 DSYDI 535


>gi|322504432|emb|CAM37443.2| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 843

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 15/92 (16%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKML--MRERQHLDNAISFIKEIQDRLCDNLIL 72
           D  + V+R+  L  + E         + + +    ++  L+  ++  +  +    D + +
Sbjct: 701 DQSDLVKRIRELEEQIE-------NAKQQEVRYTEQKAKLEADLAKAE--RAHEADMIYM 751

Query: 73  LE-LALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            E LA+E     + ++    LQ+ + E++  Q
Sbjct: 752 AERLAVE---VDLREKAEAELQQRQEELKGWQ 780


>gi|148253239|ref|YP_001237824.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium
           sp. BTAi1]
 gi|146405412|gb|ABQ33918.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. BTAi1]
          Length = 139

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 25/122 (20%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------- 258
           S ++ I E+D  I   RASG GGQ+VN   ++ ++    +                    
Sbjct: 5   SRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRITLPEDAAARLARLAGQRM 64

Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGWGRQI 312
                +V+Q ++ R+Q +NKA A   L   L E     K          SK     G+++
Sbjct: 65  TKNGVIVIQAERFRTQERNKADAIERLVTLLREAMVRPKVRRPTKPTFGSKQRRLEGKKL 124

Query: 313 RS 314
           RS
Sbjct: 125 RS 126


>gi|255016863|ref|ZP_05288989.1| hypothetical protein LmonF_01596 [Listeria monocytogenes FSL
           F2-515]
          Length = 460

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           + +  +FD        L  +  +  +P L+ +  + + LM +   L 
Sbjct: 85  DEMLSVFDSLRKMEADLRKMELRLGEPELYNDPEKYQALMTDYDTLQ 131


>gi|172036172|ref|YP_001802673.1| hypothetical protein cce_1257 [Cyanothece sp. ATCC 51142]
 gi|171697626|gb|ACB50607.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 760

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL--ELALEEDDCSILQETSDNLQR 94
            N+  A   ++E +   +++  ++ ++ +L +   LL  EL  +E+      +  + L+ 
Sbjct: 402 NNLERASQRVKELRSQRDSV-ALENVETKLEEAKALLNDELITDEEKLESFLDKLEELKN 460

Query: 95  IKLEVE 100
           I+ +++
Sbjct: 461 IESDID 466


>gi|319427548|gb|ADV55622.1| REG family ATPase, YheS [Shewanella putrefaciens 200]
          Length = 636

 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 8/72 (11%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D     +RL+ L     D  L+    +AK        L   ++    +   L D+ +   
Sbjct: 569 DQQKLSERLAELEHLLADSELYDQDNKAK--------LTAVLTERTSLTQTLEDSEMQWL 620

Query: 75  LALEEDDCSILQ 86
              EE D   L+
Sbjct: 621 ELQEEIDAMELE 632


>gi|239981359|ref|ZP_04703883.1| hypothetical protein SalbJ_18118 [Streptomyces albus J1074]
 gi|291453215|ref|ZP_06592605.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291356164|gb|EFE83066.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 155

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 24/106 (22%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV----------------------RITHIPTG 258
           + + +S+      R+SG GGQHVNT+DS V                      R+    TG
Sbjct: 24  VVLPDSELTWRFSRSSGPGGQHVNTSDSQVELRFDLAATQALPEVWKERALERLAGRLTG 83

Query: 259 VV--VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            V  V+    RSQ +N+  A + + + L E       +        
Sbjct: 84  GVLAVRASDHRSQWRNRETALDRMVSLLGEATAPPPRQRRATRIPR 129


>gi|154333727|ref|XP_001563120.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 843

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 15/92 (16%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKML--MRERQHLDNAISFIKEIQDRLCDNLIL 72
           D  + V+R+  L  + E         + + +    ++  L+  ++  +  +    D + +
Sbjct: 701 DQSDLVKRIRELEEQIE-------NAKQQEVRYTEQKAKLEADLAKAE--RAHEADMIYM 751

Query: 73  LE-LALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            E LA+E     + ++    LQ+ + E++  Q
Sbjct: 752 AERLAVE---VDLREKAEAELQQRQEELKGWQ 780


>gi|254785908|ref|YP_003073337.1| peptidyl-tRNA hydrolase domain-containing protein [Teredinibacter
           turnerae T7901]
 gi|237686949|gb|ACR14213.1| peptidyl-tRNA hydrolase domain protein [Teredinibacter turnerae
           T7901]
          Length = 135

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 24/88 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV-----------------RITHIPTGVV--- 260
            E+++ D R    RA GAGGQ+VN   SAV                 R+    +G +   
Sbjct: 6   FELNDGDIRFSAMRAQGAGGQNVNKVSSAVLLRFDVHASVLPPAVKQRLFQKESGRINSE 65

Query: 261 ----VQCQQERSQHKNKAQAWNMLRAKL 284
               ++ QQ R+Q +NKA A   L   L
Sbjct: 66  GVLLIKAQQYRTQERNKADALERLAEIL 93


>gi|6320565|ref|NP_010645.1| Gga1p [Saccharomyces cerevisiae S288c]
 gi|14548059|sp|Q06336|GGA1_YEAST RecName: Full=ADP-ribosylation factor-binding protein GGA1;
           AltName: Full=Golgi-localized, gamma ear-containing,
           ARF-binding protein 1
 gi|849172|gb|AAB64793.1| Ydr358wp [Saccharomyces cerevisiae]
 gi|285811373|tpg|DAA12197.1| TPA: Gga1p [Saccharomyces cerevisiae S288c]
          Length = 557

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 28/161 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKE 61
           + +L  L      D+  +  + L           +   A  + +  E   L         
Sbjct: 196 AAKLEELLRSGKPDDLKE-ANKLMKIMA--GFKDDTKVAVKQAINNELNKLKRKADLFN- 251

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
                       E+    D+  +  E    L    L+    +F+ L+  E D  DA +  
Sbjct: 252 ------------EMLTSADEPDLENEAIQELYG-DLKSAQPKFKKLIEEERDD-DALV-- 295

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                 +    + ++++++  R+   +  K E L + D  E
Sbjct: 296 ------SNLSKFNDLVIQLLKRYKSIKGMKEEELNVPDTNE 330


>gi|83942546|ref|ZP_00955007.1| ABC transporter, ATP-binding protein [Sulfitobacter sp. EE-36]
 gi|83846639|gb|EAP84515.1| ABC transporter, ATP-binding protein [Sulfitobacter sp. EE-36]
          Length = 603

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 16  WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                  ++ L     DP L+  N ++ +         D  +   +++QD   + L+L E
Sbjct: 546 IARLEAEIAKLEELMSDPTLYSDNPVKFQKAT------DALVERNEKLQDAEAEWLMLEE 599

Query: 75  LAL 77
            A 
Sbjct: 600 KAE 602


>gi|146294204|ref|YP_001184628.1| ABC transporter-like protein [Shewanella putrefaciens CN-32]
 gi|145565894|gb|ABP76829.1| ABC transporter related [Shewanella putrefaciens CN-32]
          Length = 636

 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 8/72 (11%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D     +RL+ L     D  L+    +AK        L   ++    +   L D+ +   
Sbjct: 569 DQQKLSERLAELEHLLADSELYDQDNKAK--------LTAVLTERTSLTQTLEDSEMQWL 620

Query: 75  LALEEDDCSILQ 86
              EE D   L+
Sbjct: 621 ELQEEIDAMELE 632


>gi|313228138|emb|CBY23288.1| unnamed protein product [Oikopleura dioica]
          Length = 202

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 224 SESDCRIDTYRASGA---GGQHVNTTDSAVRITHIPTGV--VVQCQQERSQHKNKAQAWN 278
                 I  +  +GA   GGQ +N T S  R+ H+PT      +CQ  R   +N+  A  
Sbjct: 37  DPPADEIKVFFEAGASRGGGQKMNRTHSMARVVHLPTKKRTTARCQDTRWPKENEELALL 96

Query: 279 MLRAKLYEL 287
            +R +L +L
Sbjct: 97  NVRYQLDKL 105


>gi|296271116|ref|YP_003653748.1| ABC transporter-like protein [Thermobispora bispora DSM 43833]
 gi|296093903|gb|ADG89855.1| ABC transporter related protein [Thermobispora bispora DSM 43833]
          Length = 608

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
            E + L +E   L+  +  + E + RL       E+A    D + L E    L+ +  + 
Sbjct: 537 KEQRELQKELSRLERQLDRLSEQEARLH-----AEMAAAATDYARLAELDAELREVVAQK 591

Query: 100 EYKQFESL 107
           E  + E L
Sbjct: 592 ETVEAEWL 599


>gi|289550330|ref|YP_003471234.1| Hypothetical ABC transporter ATP-binding protein vga
           [Staphylococcus lugdunensis HKU09-01]
 gi|289179862|gb|ADC87107.1| Hypothetical ABC transporter ATP-binding protein vga
           [Staphylococcus lugdunensis HKU09-01]
          Length = 647

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/62 (11%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +++ ++ +   P ++ N  ++  L + +   +      ++++  L +   L E+
Sbjct: 591 IETFETQITDIDEQLTQPEVFNNPQKSHELSQIKSDTE------QKLEQTLIEWEELQEM 644

Query: 76  AL 77
            L
Sbjct: 645 LL 646


>gi|16801244|ref|NP_471512.1| hypothetical protein lin2179 [Listeria innocua Clip11262]
 gi|16414692|emb|CAC97408.1| lin2179 [Listeria innocua Clip11262]
          Length = 650

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +   P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EETDKKIAELELQLTKPEIFQDHEKAFEITQELDVVKARGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 EKVSEELESM 650


>gi|85706095|ref|ZP_01037190.1| peptidyl-tRNA hydrolase domain protein [Roseovarius sp. 217]
 gi|85669259|gb|EAQ24125.1| peptidyl-tRNA hydrolase domain protein [Roseovarius sp. 217]
          Length = 152

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 33/140 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------------------------T 253
           + +I I + +      RASG GGQ+VN   SAV +                         
Sbjct: 17  TDQIAIEDWELTEQFMRASGPGGQNVNKVSSAVELRFEAERSPNLPAPVKTRLRRLAGRR 76

Query: 254 HIPTGVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
               G VV QC + RSQ +N+    + L   + +  +  +  +A            G + 
Sbjct: 77  WTKEGAVVLQCDETRSQTRNREIVRDRLADLIRQASVAPKRRVATKPTL-------GSKK 129

Query: 313 RSYVLQPYQ-MVKDLRTNIE 331
           R    +  +  VK LR  +E
Sbjct: 130 RRLAAKKQRGEVKALRGQVE 149


>gi|83953767|ref|ZP_00962488.1| ABC transporter, ATP-binding protein [Sulfitobacter sp. NAS-14.1]
 gi|83841712|gb|EAP80881.1| ABC transporter, ATP-binding protein [Sulfitobacter sp. NAS-14.1]
          Length = 603

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 16  WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                  ++ L     DP L+  N ++ +         D  +   +++QD   + L+L E
Sbjct: 546 IARLEAEIAKLEELMSDPTLYSDNPVKFQKAT------DALVERNEKLQDAEAEWLMLEE 599

Query: 75  LAL 77
            A 
Sbjct: 600 KAE 602


>gi|317050442|ref|YP_004111558.1| hypothetical protein Selin_0246 [Desulfurispirillum indicum S5]
 gi|316945526|gb|ADU65002.1| hypothetical protein Selin_0246 [Desulfurispirillum indicum S5]
          Length = 792

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 13/104 (12%)

Query: 18  NAVQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
              QRL  +  K +D     P    ++   +   RE +     I    E++  L +   L
Sbjct: 332 RIEQRLEEIENKWQDLPLGRP----DMQPYQERFRELEQQARTIRSESELRQLLEEARTL 387

Query: 73  LELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
                 E D   ++L++ + +    +  +   Q  +L   + D+
Sbjct: 388 QREMRVEVDQYEALLRDLARDRDEARQLIRALQ--ALPGDDFDA 429


>gi|57234979|ref|YP_180972.1| ABC transporter, ATP-binding protein [Dehalococcoides ethenogenes
           195]
 gi|57225427|gb|AAW40484.1| ABC transporter, ATP-binding protein [Dehalococcoides ethenogenes
           195]
          Length = 663

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 11/68 (16%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-----------KEIQDRL 66
           +  QR   L T   DP L+++  +A     E ++    +  +             ++ +L
Sbjct: 595 SLEQRKQELETLLADPDLYRSGQKAADTSAEYKNCKEQLVTLGDKWLRLCQQNDALKQKL 654

Query: 67  CDNLILLE 74
            D L  L+
Sbjct: 655 EDALKALD 662


>gi|315660208|ref|ZP_07913064.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus lugdunensis M23590]
 gi|315494774|gb|EFU83113.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus lugdunensis M23590]
          Length = 647

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/62 (11%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +++ ++ +   P ++ N  ++  L + +   +      ++++  L +   L E+
Sbjct: 591 IETFETQITDIDEQLTQPEVFNNPQKSHELSQIKSDTE------QKLEQTLIEWEELQEM 644

Query: 76  AL 77
            L
Sbjct: 645 LL 646


>gi|293358209|ref|XP_230787.5| PREDICTED: hypothetical protein LOC311578 [Rattus norvegicus]
          Length = 1590

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 10/104 (9%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-----LQETSDNLQR 94
            +   L +E   +   +   + +   L   L   ELA             L+   +    
Sbjct: 333 KKLTKLAKENDSMKEELLKYRSLYGDLDAALSAEELADAPHSRETELKVHLKLVEEEANL 392

Query: 95  IKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +   +   + E+  L  E D     ++ H G GG E++   + L
Sbjct: 393 LSRRIVELEVENRGLRAEMDD----MKDHGGGGGPEARLSFSSL 432


>gi|124009950|ref|ZP_01694615.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC
           23134]
 gi|123984034|gb|EAY24412.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC
           23134]
          Length = 642

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 5/58 (8%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLILL 73
            ++   +  K  D  ++ +  + +   +E   +   +       +E+  ++ +    L
Sbjct: 585 EKKQEEIELKLADNTIYNDPEKLEKTQQEFAKVQEELAAANDAWEELVMKIDELEAQL 642


>gi|110833340|ref|YP_692199.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           borkumensis SK2]
 gi|110646451|emb|CAL15927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           borkumensis SK2]
          Length = 865

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 20/97 (20%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA-------ISFIKEIQDRLC 67
           D D + +RL  L  + +             L +E   L+         +    E +  L 
Sbjct: 433 DDDASRKRLEKLEDEID------------ELEKEYADLEEIWQAEKAALQGAAEYKAELE 480

Query: 68  DNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQ 103
              + LE A    D S + E     +  ++ +V+  Q
Sbjct: 481 QARVELEQARRAGDLSRMSELQYGEIPELEKKVQDAQ 517


>gi|56460659|ref|YP_155940.1| peptidyl-tRNA hydrolase domain protein [Idiomarina loihiensis L2TR]
 gi|56179669|gb|AAV82391.1| Peptidyl-tRNA hydrolase [Idiomarina loihiensis L2TR]
          Length = 136

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 24/99 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PT 257
           +E+++S+      R+SGAGGQ+VN   +A ++                           +
Sbjct: 8   VELADSEIEWQFIRSSGAGGQNVNKVATAAQLIFDIQASSLPDFYKSRLLKKSDHRITQS 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           G V ++ Q+ RSQ +N+  A   L   +      +++ I
Sbjct: 68  GKVIIKSQETRSQARNRELALEQLIDLIRSASQVQKKRI 106


>gi|58267468|ref|XP_570890.1| eukaryotic translation initiation factor 3 110 kda subunit (eif3
           p110) [Cryptococcus neoformans var. neoformans JEC21]
 gi|134112159|ref|XP_775268.1| hypothetical protein CNBE3290 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|74685053|sp|Q5KGK5|EIF3A_CRYNE RecName: Full=Eukaryotic translation initiation factor 3 subunit A;
           Short=eIF3a; AltName: Full=Eukaryotic translation
           initiation factor 3 110 kDa subunit homolog; Short=eIF3
           p110; AltName: Full=Translation initiation factor eIF3,
           p110 subunit homolog
 gi|50257923|gb|EAL20621.1| hypothetical protein CNBE3290 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227124|gb|AAW43583.1| eukaryotic translation initiation factor 3 110 kda subunit (eif3
           p110), putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 952

 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 19/116 (16%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQN-----------VIEAKMLMRERQ 50
           +LS +L  +G   D      R          P L Q+              A  + RE+ 
Sbjct: 648 ELSERLRIVGKRVDHLERAMRKEE------RPLLAQDYERQKAEDRAAHDRANQIAREQA 701

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
                    +E++ RL   L   E   E  +  + +E     +  + ++E ++ + 
Sbjct: 702 I--EQQRAARELKQRLGRMLEDYEAVKERIESQMQEELKAAKEEARRKIEEEKAQL 755


>gi|302835143|ref|XP_002949133.1| hypothetical protein VOLCADRAFT_104203 [Volvox carteri f.
           nagariensis]
 gi|300265435|gb|EFJ49626.1| hypothetical protein VOLCADRAFT_104203 [Volvox carteri f.
           nagariensis]
          Length = 3501

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 31/156 (19%)

Query: 2   KLSRQLNCLG-------GLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLD 53
           +L  ++  +G        L D +  + R++ L  +T   P +     EA+  +     L+
Sbjct: 385 ELEARMARVGDVETRMARLTDAEVKLARIAELEARTARLPDV-----EAR--IARLADLE 437

Query: 54  NAISFIKEIQ---DRLCDNLI-LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             ++ + +++    RL D    L  LA    D         ++++    +   +F+    
Sbjct: 438 VKVARMGDLEARFSRLGDLEGKLSRLA----DLEARVGRLGDVEQRLARLADAEFKLARI 493

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           G+ ++  A L      G  E +     L  M  RWA
Sbjct: 494 GDVEAKMARL------GDVEGKL--ARLADMELRWA 521


>gi|190690845|gb|ACE87197.1| dynactin 1 (p150, glued homolog, Drosophila) protein [synthetic
           construct]
          Length = 1278

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 17/119 (14%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNT---KTEDPHLW-----QNVIEAKMLMRE-RQHLD 53
           L  +L  L           +L  L     + E    W     +   + +  ++E R+   
Sbjct: 227 LEEKLETLR--LKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAK 284

Query: 54  NAISFIKEIQDRLCDNLILLELA------LEEDDCSILQETSDNLQRIKLEVEYKQFES 106
            A+   +   + + D     E+A       EE   S+ QE     +R+       +   
Sbjct: 285 EALEAKERYMEEMADTADATEMATLDKEMAEERAESLRQEVEALKERVDELTTDLEILK 343


>gi|169851313|ref|XP_001832347.1| hypothetical protein CC1G_07734 [Coprinopsis cinerea okayama7#130]
 gi|116506613|gb|EAU89508.1| hypothetical protein CC1G_07734 [Coprinopsis cinerea okayama7#130]
          Length = 810

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 17  DNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +    ++S L         + ++     +   ++ L +E + L + ++ +++++ +L   
Sbjct: 528 EELKGKISELESNIASVLAQMQN----NDNALSEELTKEIERLSSRVAELEQVEHQLQQA 583

Query: 70  LILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFES 106
             +L+ +  E+    S ++E        + E+E  +   
Sbjct: 584 TGMLQASKRENSNLTSQIRELRSAEANYRSEIEDARHAM 622


>gi|168488216|ref|ZP_02712415.1| histidine kinase [Streptococcus pneumoniae SP195]
 gi|183572916|gb|EDT93444.1| histidine kinase [Streptococcus pneumoniae SP195]
 gi|332074340|gb|EGI84816.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
           protein [Streptococcus pneumoniae GA17570]
          Length = 446

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 84/255 (32%), Gaps = 43/255 (16%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   +RL                   + + R  +H++     ++  +    + L  L L 
Sbjct: 218 EKLYERLEQEQAL-----------RYRDMERYSRHIEELYKEVRSFRHDYTNLLTSLRLG 266

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +EE+D   ++E   ++ +          + L + + D     + +   A       + ++
Sbjct: 267 IEEEDMEQIKEVYGSVLKDSS-------QKLQNNKYD-LGRLVNIRDKA-------FKSL 311

Query: 137 LLRMYTRWAEKRK--FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           L   + + A  +   F  E  E    E   +     ++        +  +  +   V  S
Sbjct: 312 LAGKFLK-ARDKNIVFNVEVPEEIQVEGMSLLDFLTIVS-------ILCDNAIEASVEAS 363

Query: 195 -PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
            P+ S +         ++         I+IS     I ++ AS  G +      + ++I 
Sbjct: 364 QPHVSIAFLKNGAQETFIIENSIKEEGIDIS----EIFSFGASSKGEERGVGLYTVMKIV 419

Query: 254 --HIPTGVVVQCQQE 266
             H  T +   CQ +
Sbjct: 420 ESHPNTSLNTTCQNQ 434


>gi|307269903|ref|ZP_07551229.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4248]
 gi|306513693|gb|EFM82299.1| putative ATP synthase F0, A subunit [Enterococcus faecalis TX4248]
          Length = 681

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E + +  E + L + +   +++ D   DN      +LEE D  +L ET  +      
Sbjct: 510 DNEELEEI--EDRALTDEVDNFEDLTDDEADN------SLEEIDVPVLDETVSDSDTSLA 561

Query: 98  EVEYKQFESLLSGEADSNDAYLE 120
           +    + E ++  E DS D+ +E
Sbjct: 562 DESNIELEPIIENELDSLDSSVE 584


>gi|154287400|ref|XP_001544495.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150408136|gb|EDN03677.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1078

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 37/88 (42%), Gaps = 14/88 (15%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R+  L  + +           + +  E Q L       +E   RL D+   L L
Sbjct: 192 LEKKLERMETLEEEVQ---------RLQGVEAELQELRKV----EESNQRLRDSNEHLRL 238

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            L++ D + + E  + + +++ +++  +
Sbjct: 239 ELDKRDQA-VNEAVELICQLEAKIDALE 265


>gi|225180872|ref|ZP_03734320.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168353|gb|EEG77156.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
          Length = 641

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R++ L  +   P ++++   A    +E + L    + ++++     +  ILLE  
Sbjct: 586 RVEERINELEAELACPEVFEDYKLASEKGQEMEELK---AMLEKLFASWEEYTILLEEG 641


>gi|220915994|ref|YP_002491298.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953848|gb|ACL64232.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 673

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 8/67 (11%)

Query: 16  WDNAVQRLSFLNT-------KTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLC 67
                 R++ L         +  DP L+Q+  +AK L+  +    + +     E +    
Sbjct: 606 IARLEARIAELEQDEKETTARLADPALYQDFAQAKPLIERQAAARSELETRYAEWEAAQE 665

Query: 68  DNLILLE 74
               + E
Sbjct: 666 RLQAMQE 672


>gi|118587642|ref|ZP_01545052.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614]
 gi|118439264|gb|EAV45895.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614]
          Length = 603

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 8/64 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +    RL  L  +  DP L+ +N  +   + ++   L          +D   +  + LE
Sbjct: 545 IEKLEARLETLQAEMNDPQLYVKNPDKFAKISQQITDLTAE-------KDAAEEQWLELE 597

Query: 75  LALE 78
           +  E
Sbjct: 598 MLNE 601


>gi|94264338|ref|ZP_01288130.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
 gi|94266945|ref|ZP_01290597.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
 gi|93452374|gb|EAT02996.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
 gi|93455232|gb|EAT05445.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
          Length = 142

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 24/99 (24%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI------------------------ 255
           EI + E++  +   RA G GGQHVN   +A+ +                           
Sbjct: 11  EISLPEAEIELRAMRAGGPGGQHVNKAATAIHLFFDIRASSLPEQVKGRLLTLNDRRITA 70

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
              VV++    RSQ +NK +A   LR  +       ++ 
Sbjct: 71  EGTVVIKAVAHRSQEQNKEEARRRLRDLIIAASRVPKKR 109


>gi|326682071|gb|ADC34694.2| suppressor of glucose by autophagy [Mus musculus]
 gi|326693907|tpg|DAA34787.1| TPA_exp: SOGA [Mus musculus]
          Length = 1451

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 10/104 (9%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-----LQETSDNLQR 94
            +   L +E   +   +   + +   L   L   ELA             L+   +    
Sbjct: 195 KKLTKLAKENDSMKEELLKYRSLYGDLDAALSAEELADAPHSRETELKVHLKLVEEEANL 254

Query: 95  IKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +   +   + E+  L  E D     ++ H G GG E++   + L
Sbjct: 255 LSRRIVELEVENRGLRAEMDD----MKDHGGGGGPEARLAFSSL 294


>gi|308498706|ref|XP_003111539.1| hypothetical protein CRE_03004 [Caenorhabditis remanei]
 gi|308239448|gb|EFO83400.1| hypothetical protein CRE_03004 [Caenorhabditis remanei]
          Length = 1448

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 52/156 (33%), Gaps = 21/156 (13%)

Query: 1    MKLSRQLNCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISF 58
            +++ +Q      +    +N   R+  L               A  + +E     +  +  
Sbjct: 1053 LEMKKQTEKYEKMTSKCENLESRIKELEE-----------ENAAEI-KEHVAKYEQKVKK 1100

Query: 59   IKEIQDRLCDN-LILLELALEEDDCSILQE-TSDNLQR---IKLEVEYKQFESLLSGEAD 113
             +E++ ++ +    + E   +  +  + ++   D  +       E + K+   L     D
Sbjct: 1101 YEELEKKMKEMGREMKENEKKMKELDMKKDKELDEYKTKMIKSDEAKDKRIRILCKNALD 1160

Query: 114  SNDAYLEVHAGAGGTESQD--WANMLLRMYTRWAEK 147
            S     ++ +     E+++        +   + A+K
Sbjct: 1161 STKEIKKLKSTITNLEAENVKMKEENNQFVQKLAQK 1196


>gi|251809842|ref|ZP_04824315.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|282874499|ref|ZP_06283384.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis
           SK135]
 gi|251806615|gb|EES59272.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296638|gb|EFA89147.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis
           SK135]
          Length = 644

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +    ++S ++ +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELEAQISHIDEQLTQPEVFNDPLKASKFANQKSDTEQKLEQIMLEWEKLQEKL 644


>gi|210620550|ref|ZP_03292098.1| hypothetical protein CLOHIR_00041 [Clostridium hiranonis DSM 13275]
 gi|210155264|gb|EEA86270.1| hypothetical protein CLOHIR_00041 [Clostridium hiranonis DSM 13275]
          Length = 638

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 6/54 (11%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLC 67
           D +   ++++ L+       ++ N  ++K +  E+  L++ ++   ++ +  + 
Sbjct: 585 DIEQTEKKIAGLDMMLCQEEIYSNPEKSKEVNLEKAELEDKLASLYEKWEQIME 638


>gi|109096837|ref|XP_001098388.1| PREDICTED: keratin, type II cytoskeletal 73-like [Macaca mulatta]
          Length = 540

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 15/107 (14%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS--------FIKEIQDRL 66
           D  +    +S L    +         E + + ++  +L+ AI+         +K+ + +L
Sbjct: 342 DLKHTKNEISELTRLIQR-----LRSEIESVKKQCANLETAIADTEQRGDCALKDARAKL 396

Query: 67  CDNLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEA 112
            +    L+LA EE    +L+E  + L  ++ L++E   +  LL GE 
Sbjct: 397 DELEGALQLAKEEL-ARMLREYQELLSVKLSLDIEIATYRKLLEGEE 442


>gi|104781193|ref|YP_607691.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
           entomophila L48]
 gi|95110180|emb|CAK14887.1| putative protein chain release factor B [Pseudomonas entomophila
           L48]
          Length = 137

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIP-------------------- 256
           S  + + +++  +   RA GAGGQ+VN   SAV +   IP                    
Sbjct: 5   SNNVHLPDAEIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASSLPEFYKARLLALRDSRI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           TG   ++++ QQ R+Q +N+  A     A+L EL +   +       +  T    G + R
Sbjct: 65  TGDGVLIIKAQQYRTQEQNRTDAL----ARLAELIIAAGKTEKKRRPTKPTL---GSKTR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|217968007|ref|YP_002353513.1| SMC domain protein [Dictyoglomus turgidum DSM 6724]
 gi|217337106|gb|ACK42899.1| SMC domain protein [Dictyoglomus turgidum DSM 6724]
          Length = 978

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---I 71
           D     +++  +  +       + +  +  +M++ + L   I  I ++++ +        
Sbjct: 201 DLPEIKKKIEEVEEQLNK---IRKIELSHEIMKKEKLLKTLIEEITKLEEEIEKVRKDVA 257

Query: 72  LLELALEEDDCSILQETSDNLQRI 95
           LLE   EE+   ++ E     ++I
Sbjct: 258 LLERYKEEE--KLINEIRSMEEKI 279


>gi|192362423|ref|YP_001984000.1| ABC transporter ATP-binding protein [Cellvibrio japonicus Ueda107]
 gi|190688588|gb|ACE86266.1| ABC transporter, ATP-binding protein [Cellvibrio japonicus Ueda107]
          Length = 630

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIK 60
           L+ +L  L      +   +RL  + +   D  ++ +  +A  + L+ E+  L   +   +
Sbjct: 558 LANKLKNLEA--QLEKLQKRLGDIESLLGDTSIYDDKNKATLQELLAEQSQLTAQLQETE 615

Query: 61  E 61
           E
Sbjct: 616 E 616


>gi|323338103|gb|EGA79337.1| Gga1p [Saccharomyces cerevisiae Vin13]
 gi|323355526|gb|EGA87347.1| Gga1p [Saccharomyces cerevisiae VL3]
          Length = 433

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 28/161 (17%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKE 61
           + +L  L      D+  +  + L           +   A  + +  E   L        E
Sbjct: 72  AAKLEELLRSGKPDDLKE-ANKLMKIMA--GFKDDTKVAVKQAINNELNKLKRKADLFNE 128

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +         +   +QE   +L+  + +     F+ L+  E D  DA +  
Sbjct: 129 MLTSADEPDL---------ENETIQELYGDLKSAQPK-----FKKLIEEERDD-DALV-- 171

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
                 +    + ++++++  R+   +  K E L + D  E
Sbjct: 172 ------SNLSKFNDLVIQLLKRYKSIKGMKEEELNVPDTNE 206


>gi|314936981|ref|ZP_07844328.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655600|gb|EFS19345.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp.
           hominis C80]
          Length = 626

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLM-RERQHLDNAISFIK 60
           +L R +        +     R   L  + + P    NV +   L  +E++  +  +  I+
Sbjct: 514 QLERIIGTFEDYEAYKKEKDRQDILEKQAQQPKTKSNVRKKTGLSYKEKREYEALMERIE 573

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
             + RL       E+     D + ++E ++  + ++ 
Sbjct: 574 TTEHRLEQIDT--EMVEASADYAKIKELNEEKEHLEQ 608


>gi|196001841|ref|XP_002110788.1| hypothetical protein TRIADDRAFT_54062 [Trichoplax adhaerens]
 gi|190586739|gb|EDV26792.1| hypothetical protein TRIADDRAFT_54062 [Trichoplax adhaerens]
          Length = 1522

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 38/117 (32%), Gaps = 28/117 (23%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM-------------LMRERQHLDNAISFI 59
             + +  ++    L  K E+          K              +M E Q +       
Sbjct: 492 RLEQEKMLKEFEELKQKMEEE------ERLKKEQEERERQRLEEEIMMELQRIKEREEAR 545

Query: 60  KE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           K     + ++ +     +   EE +  + +E     Q +K E+     ES+L G+ D
Sbjct: 546 KAEMLAKKKIEEAERKKQ---EEKERQLAEEEERKKQELKKEL---TLESILQGDGD 596


>gi|57867540|ref|YP_189223.1| ABC transporter ATP-binding protein [Staphylococcus epidermidis
           RP62A]
 gi|57638198|gb|AAW54986.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis
           RP62A]
          Length = 644

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +    ++S ++ +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELEAQISHIDEQLTQPEVFNDPLKASKFANQKSDTEQKLEQIMLEWEKLQEKL 644


>gi|328702403|ref|XP_001952092.2| PREDICTED: myosin heavy chain, muscle isoform 1 [Acyrthosiphon pisum]
          Length = 1969

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 25/112 (22%)

Query: 15   DWDNAVQRLSFLNTKTEDPH-LWQNVIE--------AKMLMRERQHLDNAISFIKEIQDR 65
            D  +   ++  LN +      L   + +        A+    E Q  ++ I+ + +++++
Sbjct: 973  DKASKDHQIRNLNDEIAHQDELINKLNKEKKLSGETAQKTAEELQAAEDKINHLNKVKNK 1032

Query: 66   LCDNLILLELALE----------------EDDCSILQETSDNLQRIKLEVEY 101
            L   L  LE +LE                E D  + QE   +L+R K E+E 
Sbjct: 1033 LEQTLDELEDSLEREKKLRGDIEKGKRKTEGDLKLTQEAVSDLERNKKELEQ 1084


>gi|222619157|gb|EEE55289.1| hypothetical protein OsJ_03236 [Oryza sativa Japonica Group]
          Length = 1463

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 4/87 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                L+ +  + +D    Q    AK  + E   L+     I  +   +     LL    
Sbjct: 892 KLQAALNEMEQRMQDVTAMQERESAKKAVEE--ALEQEREKISSLTSEIEGLKALLVAEQ 949

Query: 78  EEDD--CSILQETSDNLQRIKLEVEYK 102
           EE+D          +  + +  EVE  
Sbjct: 950 EENDLTKKAHANAQERNEELSKEVEDA 976


>gi|94992637|ref|YP_600736.1| site-specific recombinase [Streptococcus pyogenes MGAS2096]
 gi|94546145|gb|ABF36192.1| Site-specific recombinase [Streptococcus pyogenes MGAS2096]
          Length = 643

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 13/100 (13%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R   +  +  D     +   AK L +E++ L+  ++ +  +   L ++ ++ E  
Sbjct: 399 DEKAVR--AIEKRLTD----TDQSRAKALEKEQRKLNKRLAELDRLFSSLYEDKVM-ERI 451

Query: 77  LEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADS 114
            E +     +  S   Q+ +LE+E   K+    L+   + 
Sbjct: 452 TERN----FEMMSGKYQKEQLEIEARLKEVTETLNDSYEK 487


>gi|288803299|ref|ZP_06408732.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           D18]
 gi|288334119|gb|EFC72561.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           D18]
          Length = 862

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 48/139 (34%), Gaps = 17/139 (12%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-------IQDRLCD 68
            D   +RL  L  + E      +  +   L +E   L       +        + +++  
Sbjct: 410 LDEITRRLKQLEIEREAIKRENDTEKIAQLDKEIAELKEQEHGFRAKWEGERGLVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG- 127
           +   +E    E D     E   N +R+  E+ Y + + L   E D  +   ++     G 
Sbjct: 470 DKQEIEQLKYEAD---RAEREGNYERV-AEIRYSRLKQL---EDDIKNIQQQLQTTQDGQ 522

Query: 128 --TESQDWANMLLRMYTRW 144
                +  A+ +  + +RW
Sbjct: 523 AIVREEVTADDIAEVVSRW 541


>gi|261414426|ref|YP_003248109.1| hypothetical protein Fisuc_0012 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261370882|gb|ACX73627.1| hypothetical protein Fisuc_0012 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327448|gb|ADL26649.1| putative peptide chain release factor [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 163

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
             C +  Y+ SG GGQH N T++ V ++     + ++  + RS  +NK  A         
Sbjct: 16  RACTLKGYQGSGPGGQHRNKTNTGVHLSLQQYNLEIKSSESRSAKENKIHAL---HHMQM 72

Query: 286 ELELQKREE 294
            L L  REE
Sbjct: 73  ALALNVREE 81


>gi|27468566|ref|NP_765203.1| vga protein [Staphylococcus epidermidis ATCC 12228]
 gi|293367725|ref|ZP_06614374.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27316113|gb|AAO05247.1|AE016749_193 vga protein [Staphylococcus epidermidis ATCC 12228]
 gi|291318064|gb|EFE58461.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329736879|gb|EGG73143.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis
           VCU045]
          Length = 644

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +    ++S ++ +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELEAQISHIDEQLTQPEVFNDPLKASKFANQKSDTEQKLEQIMLEWEKLQEKL 644


>gi|71667242|ref|XP_820572.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885922|gb|EAN98721.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 640

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS---AVRITHIPTGVVVQ 262
           F    V P V  ++      +    DT R+SG GGQ  N T++   A  +       V +
Sbjct: 476 FKLTAVCPNVSTTLFSNAHRATVHYDTARSSGPGGQAANVTETQIIAKLLIDGELAYVAE 535

Query: 263 CQQERSQHKNKAQAWNM---LRAKLYELELQKREEIANIGESSKTEI 306
            Q  RS   N+  A      +R + Y  +L K+     +       I
Sbjct: 536 AQDSRSALSNREAAMERLSKVRRQQYNEQLAKQHRAERVERQLVQMI 582


>gi|311273512|ref|XP_003133900.1| PREDICTED: LOW QUALITY PROTEIN: myosin-X [Sus scrofa]
          Length = 2055

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 13/110 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN--AISFIKEIQDRLCDNLILLE 74
           + A ++   L    E         EA  L RE +       +  I  ++  + D   + E
Sbjct: 853 EEAARKQRELEALQES------QREA-ELSRELEKQKENKQVEEILRLEKEIEDLQRMKE 905

Query: 75  LAL----EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
                  E     + Q   + L+R++ E      E L S   D  D  + 
Sbjct: 906 RQELSLTEASLQKLQQLRDEELRRLEDEACRAAQEXLESLNFDEIDECVR 955


>gi|255545258|ref|XP_002513690.1| conserved hypothetical protein [Ricinus communis]
 gi|223547598|gb|EEF49093.1| conserved hypothetical protein [Ricinus communis]
          Length = 976

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 18/172 (10%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++N +  +   + A   L  L  + E  +          LM+ER  ++  +  +  ++
Sbjct: 686 REKINAVEKMA--EEARLELERLRAEREADNF--------ALMKERASIEAEMEVLSRLK 735

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + +   L  L   + + S  +E  + LQ+ + E E ++   L         A     A
Sbjct: 736 GEVEE--QLQTLLSSKVEISYEKERINKLQK-EAENEKQEISRLQYELEVERKALSIARA 792

Query: 124 GAGGT--ESQDWANMLLRMYTRWAEKRKFKTEALE--IHDGEEAGIKSATLL 171
            A      +++ A ++     RW E++  K         +    G   AT  
Sbjct: 793 WAEDEAKRAREHAKVIEEARDRW-ERQGIKVVVDNDLREETSAGGTWVATAR 843


>gi|302840018|ref|XP_002951565.1| hypothetical protein VOLCADRAFT_92191 [Volvox carteri f.
           nagariensis]
 gi|300263174|gb|EFJ47376.1| hypothetical protein VOLCADRAFT_92191 [Volvox carteri f.
           nagariensis]
          Length = 2748

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKT-EDPHLWQNVIEAKM------LMRERQHLDN 54
           ++  +L       D +    R + L  +           ++A+       +MRER   D+
Sbjct: 696 EVEERLKAREAELD-ERLKAREAELEGRLKAREAELDERLKAREAELEEQVMRERAANDS 754

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESL 107
                + +   L + L   E  + +     + +  ++L+  +  +     +F +L
Sbjct: 755 LAKQNRALYSTLEETLSAAEHEVHDTSQKEVSQLKEDLELRERALSAVQAEFSAL 809


>gi|50292661|ref|XP_448763.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528075|emb|CAG61726.1| unnamed protein product [Candida glabrata]
          Length = 1112

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-------LWQNVIEAKMLMRERQHLDNAI 56
              +  L          +  + +  +T DP        L  +V  A+  + E++  +  +
Sbjct: 907 RSNMPKLLKKLGIAVLSEEFAEIE-ETVDPDEFKRKRKLINDVDAAQKKLSEKKKSNGWV 965

Query: 57  SFIKEIQDRLCDNLILLELALEED 80
           S    ++ +      ++E A+EE 
Sbjct: 966 SKW--LKPKKSKWQTMVEEAVEEG 987


>gi|269138121|ref|YP_003294821.1| hypothetical protein ETAE_0765 [Edwardsiella tarda EIB202]
 gi|267983781|gb|ACY83610.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
 gi|304558166|gb|ADM40830.1| Hypothetical protein YaeJ [Edwardsiella tarda FL6-60]
          Length = 138

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 24/98 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG--- 258
           I E +  +   RA G GGQ+VN   SA+ +                      H+ T    
Sbjct: 10  IPEREISLSAIRAQGNGGQNVNKVSSAIHLRFDIRASSLPPVYQQRLLAMQHHLITDDGV 69

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           VV++ Q  R+Q +N+  A   L A + +     +   A
Sbjct: 70  VVIKSQSFRTQAQNRDDALARLAALIRQATEVAKPRRA 107


>gi|150004575|ref|YP_001299319.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC
           8482]
 gi|149932999|gb|ABR39697.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC
           8482]
          Length = 647

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/75 (10%), Positives = 29/75 (38%), Gaps = 5/75 (6%)

Query: 2   KLSRQLNCLG-GLFDWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D +  +++L      +      P    ++   +   + ++ LD  +
Sbjct: 572 ELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631

Query: 57  SFIKEIQDRLCDNLI 71
              + +   L +   
Sbjct: 632 EEWETVSMELEEMQG 646


>gi|294776766|ref|ZP_06742230.1| ABC transporter, ATP-binding protein [Bacteroides vulgatus PC510]
 gi|294449421|gb|EFG17957.1| ABC transporter, ATP-binding protein [Bacteroides vulgatus PC510]
          Length = 647

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/75 (10%), Positives = 29/75 (38%), Gaps = 5/75 (6%)

Query: 2   KLSRQLNCLG-GLFDWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D +  +++L      +      P    ++   +   + ++ LD  +
Sbjct: 572 ELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631

Query: 57  SFIKEIQDRLCDNLI 71
              + +   L +   
Sbjct: 632 EEWETVSMELEEMQG 646


>gi|225680056|gb|EEH18340.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 921

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 70/220 (31%), Gaps = 32/220 (14%)

Query: 1   MKLSRQLNCLGGLFD--WDNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           M+  +    L G  D       +R +FL  + E       +    A+ L +E   L   I
Sbjct: 509 MEAWQDFINLKGRMDTELSKVTKRNNFLVEELETWKQQFLKFQAFAEQLTKETSELKVKI 568

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D+   L L       + DD          I +E     +R  
Sbjct: 569 ESHKRENRRLTGLIDQQKDDAARLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNS 628

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE- 153
            E+   Q   +++L    ++    L + +   G         ++R  +   E   F  E 
Sbjct: 629 KEISALQHTSDTMLRQRDEAQRVVLHLRSLINGQAHH--MEHIVRSLSNTPELSGFIQEG 686

Query: 154 ---ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
                E ++ E+  I  A+ +  G       +   G   +
Sbjct: 687 YDDIPEDNEAEDHDITEASPVRPGSQMRSISRLPSGASTI 726


>gi|6996558|emb|CAB56466.2| myosin X [Mus musculus]
          Length = 2062

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 13/110 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER--QHLDNAISFIKEIQDRLCDNLILLE 74
           +   +R   L          Q    A  L RE   Q  +  +  I  ++  + D   + E
Sbjct: 852 EAETRRQQELEAL-------QKSQRAADLTRELEKQRENKQVEEILRLEKEIEDLQRMKE 904

Query: 75  LAL----EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
                  E     + Q   + L+R++ E      E L S   D  D  + 
Sbjct: 905 RQELSLTEASLQKLQQLRDEELRRLEDEACRAAQEFLESLNFDEIDECVR 954


>gi|226291844|gb|EEH47272.1| DENN domain-containing protein [Paracoccidioides brasiliensis Pb18]
          Length = 928

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 70/220 (31%), Gaps = 32/220 (14%)

Query: 1   MKLSRQLNCLGGLFD--WDNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           M+  +    L G  D       +R +FL  + E       +    A+ L +E   L   I
Sbjct: 509 MEAWQDFINLKGRMDTELSKVTKRNNFLVEELETWKQQFLKFQAFAEQLTKETSELKVKI 568

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D+   L L       + DD          I +E     +R  
Sbjct: 569 ESHKRENRRLTGLIDQQKDDAARLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNS 628

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE- 153
            E+   Q   +++L    ++    L + +   G         ++R  +   E   F  E 
Sbjct: 629 KEISALQHTSDTMLRQRDEAQRVVLHLRSLINGQAHH--MEHIVRSLSNTPELSGFIQEG 686

Query: 154 ---ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
                E ++ E+  I  A+ +  G       +   G   +
Sbjct: 687 YDDIPEDNEAEDHDITEASPVRPGSQMRSISRLPSGASTI 726


>gi|254412964|ref|ZP_05026736.1| hypothetical protein MC7420_2124 [Microcoleus chthonoplastes PCC
           7420]
 gi|196180128|gb|EDX75120.1| hypothetical protein MC7420_2124 [Microcoleus chthonoplastes PCC
           7420]
          Length = 688

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 46/108 (42%), Gaps = 17/108 (15%)

Query: 12  GLFDWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLM-RERQHLDNAISFIKEIQDRL 66
           GL D +    RL      +  +   P  W +V + ++++ +ER  +    + + +I+ +L
Sbjct: 361 GLADVEETAIRLGVQVGEIERQI--PDFWADVDQQQIILAQERAEISRIETQLDDIRKKL 418

Query: 67  ----CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
                +++  L+  L+E D ++          ++     +Q E L + 
Sbjct: 419 LTFPDEDISQLQKRLDEIDVTLRDL------TLEKGANQQQIEQLATD 460


>gi|94500790|ref|ZP_01307319.1| hypothetical protein RED65_03605 [Oceanobacter sp. RED65]
 gi|94427112|gb|EAT12093.1| hypothetical protein RED65_03605 [Oceanobacter sp. RED65]
          Length = 137

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 24/99 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPT-- 257
           ++I   +  +   RA G+GGQ+VN   +A+ +                      H  T  
Sbjct: 8   VQIPNDEIEMHAMRAQGSGGQNVNKNSTAIHLRFDIKASSLPDLYKDKLLAMSDHRITKD 67

Query: 258 -GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
             +V++ Q+ +SQ  NK  A   L A + E   ++++  
Sbjct: 68  GEIVIKSQEHKSQELNKEAALARLAAMIKEANKEQKKRK 106


>gi|295098982|emb|CBK88071.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
           [Eubacterium cylindroides T2-87]
          Length = 328

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 5/66 (7%)

Query: 18  NAVQRLSFLNTK-----TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +    +  L          +P    +  EA  ++ +    ++ +   K+ ++ L +   L
Sbjct: 117 SLESYVEELEALDIPVVLLEPETADDFEEAVEIIGKVMGCEDKVDEYKQYEEDLLEKYEL 176

Query: 73  LELALE 78
            E+  E
Sbjct: 177 DEVEEE 182


>gi|302875735|ref|YP_003844368.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
 gi|307689166|ref|ZP_07631612.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
 gi|302578592|gb|ADL52604.1| ATP-dependent chaperone ClpB [Clostridium cellulovorans 743B]
          Length = 866

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 25/121 (20%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQN---VIEAKMLMRERQHLDN--------------AISF 58
            D   +++  L  + E      +   +   + L +E   L                 I  
Sbjct: 417 LDILKRKIFQLEIEMEALSKESDSSAIQRYEALKKEVSELKEQDLELSAKYEKEKHKILS 476

Query: 59  IKEIQDRLCDNLILLELALEEDDCS--------ILQETSDNLQRIKLEVEYKQFESLLSG 110
           +KE++  + D    +E A  E D +         L ET   L+  +  +  +   ++L  
Sbjct: 477 VKELKSEIDDIKGEIERAEREYDLNKAAALKYGKLPETEQKLKEKEEALRKEYDTAMLKE 536

Query: 111 E 111
           E
Sbjct: 537 E 537


>gi|228475290|ref|ZP_04060014.1| ABC transporter, ATP-binding protein [Staphylococcus hominis SK119]
 gi|228270666|gb|EEK12080.1| ABC transporter, ATP-binding protein [Staphylococcus hominis SK119]
          Length = 626

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLM-RERQHLDNAISFIK 60
           +L R +        +     R   L  + + P    NV +   L  +E++  +  +  I+
Sbjct: 514 QLERIIGTFEDYEAYKKEKDRQDILEKQAQQPKTKSNVRKKTGLSYKEKREYEALMERIE 573

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
             + RL       E+     D + ++E ++  + ++ 
Sbjct: 574 TTEHRLEQIDT--EMVEASADYAKIKELNEEKEHLEQ 608


>gi|197121290|ref|YP_002133241.1| ABC transporter [Anaeromyxobacter sp. K]
 gi|196171139|gb|ACG72112.1| ABC transporter-related protein [Anaeromyxobacter sp. K]
          Length = 673

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 8/67 (11%)

Query: 16  WDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLC 67
                 R++ L         +  DP L+Q+  +AK L+  +    + +     E +    
Sbjct: 606 IARLEARIAELERDEKETTARLADPALYQDFAQAKPLIERQAAARSELETRYAEWEAAQE 665

Query: 68  DNLILLE 74
               + E
Sbjct: 666 RLQAMQE 672


>gi|153956412|ref|YP_001397177.1| thiamine biosynthesis protein ThiH [Clostridium kluyveri DSM 555]
 gi|219856724|ref|YP_002473846.1| hypothetical protein CKR_3381 [Clostridium kluyveri NBRC 12016]
 gi|146349270|gb|EDK35806.1| HydG [Clostridium kluyveri DSM 555]
 gi|219570448|dbj|BAH08432.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 475

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD-RLCDNLILLELALEEDDCSIL 85
          N   ED  + Q++ EA+ L++++  ++  +S  KE +     +  +LLE+    DD   L
Sbjct: 10 NEFIEDGEVLQSINEAQKLVKDKNEINRILSKAKEYRGLTHREAAVLLEI----DDEETL 65

Query: 86 QETSDNLQRIKLEV 99
          ++     + +K ++
Sbjct: 66 EKMYKIAKEVKEKI 79


>gi|397579|emb|CAA52297.1| LL5 [Rattus norvegicus]
          Length = 781

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 165 EERAQVLGRV---EQLKVRVKELEQQL--------QEAAREAEMERALLQGEREAERALL 213

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + +D L+      E  +F+ L
Sbjct: 214 QKEQRAMDQLQEKLVALETGIQKERDKEADALETETKLFEDLEFQQL 260


>gi|23013715|ref|ZP_00053581.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 139

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 31/129 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-------IPTGVVVQ----------- 262
           I I E +      R+SG GGQ+VN  ++AV++         +P  V V+           
Sbjct: 8   IAIDEKEIEESFVRSSGPGGQNVNKVETAVQLRFDARRSPSLPDDVSVRLQKLAGSRLTL 67

Query: 263 -------CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
                   Q  RSQ +N+A+A   L      +E+ +        +   T+   G Q R  
Sbjct: 68  DGVIIIIAQTHRSQERNRAEALERL------VEMIREAAKPPPPKRRPTKPTKGSQERRL 121

Query: 316 VLQPYQMVK 324
             +  + V 
Sbjct: 122 ESKGKRAVT 130


>gi|124266487|ref|YP_001020491.1| endopeptidase La [Methylibium petroleiphilum PM1]
 gi|124259262|gb|ABM94256.1| Endopeptidase La [Methylibium petroleiphilum PM1]
          Length = 805

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMR---ERQHLDNAI-SFIK 60
           +L     + D D+   RL  L  + E    + Q     +  ++   E+   +  +   +K
Sbjct: 179 KLENKQAILDLDSVNARLEKLLEQLEHEVDILQVEKRIRGRVKRQMEKSQREYYLNEQVK 238

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            IQ  L +     +L   E      +   D  ++   E++  +  S +S EA
Sbjct: 239 AIQKELGEGEEGADLEELEKKIIAAKMPKDARKKADAELKKLKLMSPMSAEA 290


>gi|159473160|ref|XP_001694707.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158276519|gb|EDP02291.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 874

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 25/125 (20%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTED---------------PHLWQNVIEAKML 45
           ++L RQL  L G++D +    ++  L     +                 LW     A   
Sbjct: 338 VELQRQLVELRGMYD-ELKSTKIHELEKVLAEQVQYTEEQVRHAEQKAKLW--QAAA--- 391

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET--SDNLQRIKLEVEYKQ 103
             E        +  +E+  R+       +  L E    +L+       L + +  +   +
Sbjct: 392 --EHAEQKAKAAGSEEVASRIASLEAQAQQLLAEKGELLLRVAQQERELAQTQQALHDMR 449

Query: 104 FESLL 108
            E +L
Sbjct: 450 AELML 454


>gi|154249469|ref|YP_001410294.1| histidine kinase [Fervidobacterium nodosum Rt17-B1]
 gi|154153405|gb|ABS60637.1| histidine kinase [Fervidobacterium nodosum Rt17-B1]
          Length = 408

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 18/109 (16%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KE 61
           L+ ++      F+ +  V++ + L  + E               RE +  +  +S +  E
Sbjct: 172 LAYRVQVKPKSFEVEELVEKFNDLMERIE---------------REYKAQETFVSAVSHE 216

Query: 62  IQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLL 108
           ++  + + L  + +      DD  IL+E    ++    E++      LL
Sbjct: 217 LRTPVANLLGYVSMLKRWGTDDKEILEEAIGAIEESSKEIKEIIENMLL 265


>gi|113969085|ref|YP_732878.1| ABC transporter-like protein [Shewanella sp. MR-4]
 gi|114048771|ref|YP_739321.1| ABC transporter-like protein [Shewanella sp. MR-7]
 gi|113883769|gb|ABI37821.1| ABC transporter related [Shewanella sp. MR-4]
 gi|113890213|gb|ABI44264.1| ABC transporter related [Shewanella sp. MR-7]
          Length = 637

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISF----IKEIQDRLCD 68
           D     +RL+ L     D  L+   N  +   ++ ER  L   +        E+Q+ +  
Sbjct: 570 DQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDS 629

Query: 69  NLILLELA 76
               LEL 
Sbjct: 630 ME--LELM 635


>gi|291537407|emb|CBL10519.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Roseburia intestinalis M50/1]
          Length = 632

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           ++++ L  +    KE +  + D++  LE  LE+ D  +    ++  +  +L  E +  E 
Sbjct: 550 KQKKKLKFSYKEQKEYET-IEDDIAALEQKLEDLDNEMAANATNAAKLRELVEEKENAEK 608

Query: 107 LLSGEADSNDAYLEVHAGAGGTES 130
           +L  + D  +   E+ A   G +S
Sbjct: 609 MLEEKMDRWEYLEELAAKIAGQQS 632


>gi|303321544|ref|XP_003070766.1| hypothetical protein CPC735_038850 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110463|gb|EER28621.1| hypothetical protein CPC735_038850 [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1252

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 16/117 (13%)

Query: 2   KLSRQLNCLGGL-FDWDNAVQRL----SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L  +   L     D +     L      L  K  +        + + + R +  L++ I
Sbjct: 707 ELDARQEELNATKSDLEAKQAELVDRQKELEEKQSEVE-----AKQEEINRLKSELESKI 761

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           + +++ +  L      LE    E     LQ   D LQ +K E+E K+ + L S +AD
Sbjct: 762 AELEDKRRELEQKQGELESKQTE-----LQAIQDELQEVKAELEEKKSQ-LESKQAD 812


>gi|237822333|ref|ZP_04598178.1| histidine kinase [Streptococcus pneumoniae CCRI 1974M2]
          Length = 446

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 85/258 (32%), Gaps = 40/258 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D     +    L  +          +  + + R  +H++     ++  +    + L  L
Sbjct: 212 LDTYLKEKLYERLEQEQA--------LRYRDMERYSRHIEELYKEVRSFRHDYTNLLTSL 263

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            L +EE+D   ++E   ++ +          + L + + D     + +   A       +
Sbjct: 264 RLGIEEEDMEQIKEVYGSVLKDSS-------QKLQNNKYD-LGRLVNIRDKA-------F 308

Query: 134 ANMLLRMYTRWAEKRK--FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++L   + + A  +   F  E  E    E   +     ++        +  +  +   V
Sbjct: 309 KSLLAGKFLK-ARDKNIVFNVEVPEEIQVEGMSLLDFLTIVS-------ILCDNAIEASV 360

Query: 192 RIS-PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
             S P+ S +         ++         I+IS     I ++ AS  G +      + +
Sbjct: 361 EASQPHVSIAFLKNGAQETFIIENSIKEEGIDIS----EIFSFGASSKGEERGVGLYTVM 416

Query: 251 RIT--HIPTGVVVQCQQE 266
           +I   H  T +   CQ +
Sbjct: 417 KIVESHPNTSLNTTCQNQ 434


>gi|220924633|ref|YP_002499935.1| Class I peptide chain release factor [Methylobacterium nodulans ORS
           2060]
 gi|219949240|gb|ACL59632.1| Class I peptide chain release factor [Methylobacterium nodulans ORS
           2060]
          Length = 141

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 25/101 (24%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI----------------- 255
             ++ +  I I E++      RASG GGQ+VN   +AV++                    
Sbjct: 1   MDLECTPSITIDEAELEESFVRASGPGGQNVNKVATAVQLRFDVRRSPSLPNAVAIRLMK 60

Query: 256 -------PTGV-VVQCQQERSQHKNKAQAWNMLRAKLYELE 288
                    G+ V+  Q  R+Q +N+A+A   L   + E  
Sbjct: 61  LAGRRLTADGILVITAQAHRTQERNRAEARERLAELVREAA 101


>gi|323700419|ref|ZP_08112331.1| Class I peptide chain release factor [Desulfovibrio sp. ND132]
 gi|323460351|gb|EGB16216.1| Class I peptide chain release factor [Desulfovibrio desulfuricans
           ND132]
          Length = 141

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 48/135 (35%), Gaps = 34/135 (25%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---------------------- 258
           + I ES+ R    R+SG GGQHVNTTD+ V +     G                      
Sbjct: 8   VSIPESELRFTACRSSGPGGQHVNTTDTRVTLLFDVEGSPSLTELQKVVVQGKLRRRMDK 67

Query: 259 ---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS- 314
              + V  Q  RSQ  N+  A      +  EL       +  +    +T +    + R  
Sbjct: 68  RGVLQVTSQVYRSQKTNRESAV----DRFVELMQW---ALTPVAPRKETRVPRSAKRRRL 120

Query: 315 -YVLQPYQMVKDLRT 328
               +  Q  +D RT
Sbjct: 121 ERKQRTAQRKRDRRT 135


>gi|57640224|ref|YP_182702.1| pyruvate-formate lyase [Thermococcus kodakarensis KOD1]
 gi|57158548|dbj|BAD84478.1| pyruvate-formate lyase [Thermococcus kodakarensis KOD1]
          Length = 819

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 12  GLFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G+ D  +   +++  L     DP    +    +  M E + +D     I     R  + L
Sbjct: 197 GVLDIKEEIRRKMEEL-----DPS---DPEYYEK-MEELKAMDIVADAILIYARRYAEKL 247

Query: 71  ILLELALEEDDCSILQETSDNLQ 93
              ++A EE D    +E     +
Sbjct: 248 E--KMAEEETDPKRKEELKQMAE 268


>gi|241764161|ref|ZP_04762196.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN]
 gi|241366498|gb|EER60998.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN]
          Length = 135

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PT 257
           +E++E++      RA GAGGQ+VN   SAV +                            
Sbjct: 6   LEVAEAEVEFTAMRAQGAGGQNVNKVSSAVHLRFDVGASSLPADVKERLLALRDTRITQD 65

Query: 258 GVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GVVV + QQ RSQ +N+A A   L A +  +    R   A
Sbjct: 66  GVVVIKAQQYRSQEQNRADALARLNALVQSVAQPPRARRA 105


>gi|238062575|ref|ZP_04607284.1| ABC transporter related [Micromonospora sp. ATCC 39149]
 gi|237884386|gb|EEP73214.1| ABC transporter related [Micromonospora sp. ATCC 39149]
          Length = 611

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           EA+   +E   L+  I+ +++ +  L D     +LA    D + + E    L+ ++ E E
Sbjct: 541 EARQAKKELSRLERQIAKLEQREATLLD-----QLAANATDYARVAELDAQLKDVRAERE 595

Query: 101 YKQ 103
             +
Sbjct: 596 QVE 598


>gi|325268693|ref|ZP_08135322.1| mobilization protein [Prevotella multiformis DSM 16608]
 gi|324988937|gb|EGC20891.1| mobilization protein [Prevotella multiformis DSM 16608]
          Length = 418

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++   L  L G  + D A +R+  L  + E         +A  + +E   L + +    
Sbjct: 242 LQVKGTLYSLFGNTELDKAEKRIEELEREMERQKFLSEKEKA-EIRKEVILLQDTVRGRD 300

Query: 61  EIQDRLCDNLILLELAL 77
                L + + + E   
Sbjct: 301 RTIAELKETMQVYEEER 317


>gi|163852648|ref|YP_001640691.1| class I peptide chain release factor [Methylobacterium extorquens
           PA1]
 gi|240139981|ref|YP_002964458.1| Class I peptide chain release factor domain [Methylobacterium
           extorquens AM1]
 gi|254562407|ref|YP_003069502.1| Class I peptide chain release factor domain [Methylobacterium
           extorquens DM4]
 gi|163664253|gb|ABY31620.1| Class I peptide chain release factor [Methylobacterium extorquens
           PA1]
 gi|240009955|gb|ACS41181.1| Class I peptide chain release factor domain [Methylobacterium
           extorquens AM1]
 gi|254269685|emb|CAX25657.1| Class I peptide chain release factor domain [Methylobacterium
           extorquens DM4]
          Length = 140

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 9/69 (13%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
             +  + +IEI E++      RASG GGQ+VN   +AV++              RS+   
Sbjct: 1   MALQCTPQIEIDEAELEEAFVRASGPGGQNVNKLSTAVQLRFD---------VRRSRSLP 51

Query: 273 KAQAWNMLR 281
            A A  ++R
Sbjct: 52  DAVAVRLMR 60


>gi|329895452|ref|ZP_08271033.1| Hypothetical protein IMCC3088_1493 [gamma proteobacterium IMCC3088]
 gi|328922335|gb|EGG29681.1| Hypothetical protein IMCC3088_1493 [gamma proteobacterium IMCC3088]
          Length = 140

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---HIPT-------------------- 257
           I I  S+      RA GAGGQ+VN   SA+ +T   H  +                    
Sbjct: 11  IAIPMSEIDYHAIRAQGAGGQNVNKVSSAIHLTFDIHQSSLPEPYKQGLLKLSDQRITKD 70

Query: 258 GVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GVVV + Q+ R+Q +NK  A   LR  + +   Q +   A
Sbjct: 71  GVVVIKAQRHRTQEQNKEDALARLRQLILKAGHQDKPRKA 110


>gi|332654826|ref|ZP_08420568.1| DNA gyrase, A subunit [Ruminococcaceae bacterium D16]
 gi|332516169|gb|EGJ45777.1| DNA gyrase, A subunit [Ruminococcaceae bacterium D16]
          Length = 852

 Score = 36.9 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 12/90 (13%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKE 61
           L  +L  L G  D +        L  +               L+ +   L   +   + E
Sbjct: 435 LDMRLKALQG-LDREKLEAEYKELEERIA---------YYDKLLSDEGLLRQVLKDELTE 484

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDN 91
           I+D+  D     E+A  EDD  I     + 
Sbjct: 485 IRDKYGDQRKT-EIAFVEDDLDIEDLIEEE 513


>gi|293115474|ref|ZP_06604513.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876]
 gi|292809854|gb|EFF69059.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876]
          Length = 998

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 19/112 (16%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI----- 59
           R +      FD+     R   L     +   W      + +++E   L      I     
Sbjct: 387 RYVKAASDYFDYVENKARYDELKELISN-STWNR----EDVLKELSELAAFKKTIVDRKT 441

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQET---------SDNLQRIKLEVEYK 102
            E++ R+ +   L E    E D +  ++             L+++K E+E  
Sbjct: 442 TELEARIDEIKTLTEKVCAERDEAADKKINVYGEINKNQGQLKQLKNEIEEL 493


>gi|261192976|ref|XP_002622894.1| SPX domain-containing protein [Ajellomyces dermatitidis SLH14081]
 gi|239589029|gb|EEQ71672.1| SPX domain-containing protein [Ajellomyces dermatitidis SLH14081]
          Length = 811

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 69/212 (32%), Gaps = 45/212 (21%)

Query: 13  LFDWDNAVQRLSFLNTK------TED--PHLWQNVIEAKMLMRER--QHLDNA----ISF 58
             D+    Q L    T+      + D  P  W +  E +  ++E     LD      ++ 
Sbjct: 19  YIDYKKLKQLLREHETRDGSQDGSSDESPE-WTDQDE-ETFVQELINVQLDKVNAFQVNT 76

Query: 59  IKEIQDRLCDNLILLELALEEDD-----------CSILQETSDNLQRIKLEVEYKQ---- 103
            K+++DR  D    LE  + +DD               +    +L  I  E+   +    
Sbjct: 77  YKQLRDRTSDCEAKLEPLVVKDDGSHQVKDPDQRRETAESAMKDLDAITKELSELEKFSR 136

Query: 104 --FESLLS--GEADSN-------DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             F   L    + D            L+V        S+D++ +L R+ T ++  R+   
Sbjct: 137 INFTGFLKAAKKHDRKRGTRYKVRPLLQVRLSQLPFNSEDYSPLLYRLSTMYSFIRQNLG 196

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
                   E A      L   G +AY   K  
Sbjct: 197 HIGHEQSTEGAPAVDVHL---GQDAYTSHKFW 225


>gi|319792789|ref|YP_004154429.1| class i peptide chain release factor [Variovorax paradoxus EPS]
 gi|315595252|gb|ADU36318.1| Class I peptide chain release factor [Variovorax paradoxus EPS]
          Length = 135

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 24/86 (27%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---------------------- 258
           I I   +  I   RA GAGGQ+VN   SAV + +                          
Sbjct: 6   ILIDPDEVEISAIRAQGAGGQNVNKVSSAVHLRYDIHASSLPADVKERLLALRDSRITQE 65

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282
              V++ QQ R+Q  N+A A   L+A
Sbjct: 66  GVFVLKAQQHRTQEMNRADALARLQA 91


>gi|255029062|ref|ZP_05301013.1| hypothetical protein LmonL_07826 [Listeria monocytogenes LO28]
          Length = 417

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           + +  +FD        L  +  +  +P L+ +  + + LM +   L 
Sbjct: 85  DEMLSVFDSLRKMEADLRKMELRLGEPELYNDPEKYQALMTDYDTLQ 131


>gi|239906239|ref|YP_002952979.1| putative ABC transporter ATP-binding protein [Desulfovibrio
           magneticus RS-1]
 gi|239796104|dbj|BAH75093.1| putative ABC transporter ATP-binding protein [Desulfovibrio
           magneticus RS-1]
          Length = 666

 Score = 36.9 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNLI 71
            +  + + S +     DP  +        L +E   L    ++ ++ +  +++ + D   
Sbjct: 598 LETLLAKQSEVEAVMADPETYAQRELFSKLSKEYSDLSREAEDLLARMAVMEEEIADLEA 657


>gi|84029395|sp|Q63312|PHLB1_RAT RecName: Full=Pleckstrin homology-like domain family B member 1;
           AltName: Full=Protein LL5-alpha
          Length = 831

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   LG +   +    R+  L  +            A+    ER  L       + + 
Sbjct: 215 EERAQVLGRV---EQLKVRVKELEQQL--------QEAAREAEMERALLQGEREAERALL 263

Query: 64  DRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
            +    +  L+    ALE        + +D L+      E  +F+ L
Sbjct: 264 QKEQRAMDQLQEKLVALETGIQKERDKEADALETETKLFEDLEFQQL 310


>gi|152974901|ref|YP_001374418.1| hypothetical protein Bcer98_1097 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023653|gb|ABS21423.1| conserved repeat domain [Bacillus cytotoxicus NVH 391-98]
          Length = 743

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 8/96 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER--QHLDNAISFIKEI-----QDRLCD 68
            D A +++S L   +    L   + +A+ L++ER    L NA   +  +        L D
Sbjct: 361 IDAAKEKVSQLPDNSNKTELLNEIKKAQQLLKEREATQLKNAQQAVNALFSDDKHTILND 420

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +L   E+   +    ++       + ++ E+E  + 
Sbjct: 421 SLTEKEIKEAKQKVELVSNL-PEKEVLQKEIERAEH 455


>gi|89100197|ref|ZP_01173064.1| ABC transporter ATP-binding protein uup [Bacillus sp. NRRL B-14911]
 gi|89085047|gb|EAR64181.1| ABC transporter ATP-binding protein uup [Bacillus sp. NRRL B-14911]
          Length = 639

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 6/36 (16%), Positives = 13/36 (36%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                L  L  +  DP  + +    + +++E   L 
Sbjct: 96  EMEAELRRLEERMADPGAFNDPGSYEKILKEYDLLQ 131


>gi|330502253|ref|YP_004379122.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
           mendocina NK-01]
 gi|328916539|gb|AEB57370.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas mendocina
           NK-01]
          Length = 137

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 24/98 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---------------------- 258
           + I + +  +   RA GAGGQ+VN   SAV +                            
Sbjct: 8   VHIPDEEIELTAIRAQGAGGQNVNKVSSAVHLRFDSQASSLPPFYKERLLAFADSRITAD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
             VV++ QQ R+Q +N+A A   L   +      +++ 
Sbjct: 68  GVVVIKAQQYRTQEQNRADALERLAELIRTAGKVEKKR 105


>gi|239613612|gb|EEQ90599.1| SPX domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 811

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 69/212 (32%), Gaps = 45/212 (21%)

Query: 13  LFDWDNAVQRLSFLNTK------TED--PHLWQNVIEAKMLMRER--QHLDNA----ISF 58
             D+    Q L    T+      + D  P  W +  E +  ++E     LD      ++ 
Sbjct: 19  YIDYKKLKQLLREHETRDGSQDGSSDESPE-WTDQDE-ETFVQELINVQLDKVNAFQVNT 76

Query: 59  IKEIQDRLCDNLILLELALEEDD-----------CSILQETSDNLQRIKLEVEYKQ---- 103
            K+++DR  D    LE  + +DD               +    +L  I  E+   +    
Sbjct: 77  YKQLRDRTSDCEAKLEPLVVKDDGSHQVKDPDQRRETAESAMKDLDAITKELSELEKFSR 136

Query: 104 --FESLLS--GEADSN-------DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             F   L    + D            L+V        S+D++ +L R+ T ++  R+   
Sbjct: 137 INFTGFLKAAKKHDRKRGTRYKVRPLLQVRLSQLPFNSEDYSPLLYRLSTMYSFIRQNLG 196

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
                   E A      L   G +AY   K  
Sbjct: 197 HIGHEQSTEGAPAVDVHL---GQDAYTSHKFW 225


>gi|89093104|ref|ZP_01166055.1| hypothetical protein MED92_03468 [Oceanospirillum sp. MED92]
 gi|89082754|gb|EAR61975.1| hypothetical protein MED92_03468 [Oceanospirillum sp. MED92]
          Length = 137

 Score = 36.9 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 24/100 (24%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG---------------------- 258
           + I   +   +  RA G+GGQ+VN   SA+ +                            
Sbjct: 8   VFIYPHELEFNAIRAQGSGGQNVNKVSSAIHLRFDIQRSSLPDFYKERLLAYSDQRISSD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             +V++ Q  R Q +NK  A   L   + E    +++  A
Sbjct: 68  GIIVIKAQNHRDQERNKEDAMQRLCLLIQEATKVEKQRRA 107


>gi|289548575|ref|YP_003473563.1| MutS2 family protein [Thermocrinis albus DSM 14484]
 gi|289182192|gb|ADC89436.1| MutS2 family protein [Thermocrinis albus DSM 14484]
          Length = 751

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 26/60 (43%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   +  + L++    ++ ++ +    L  LE   EE     +QE  + L++++ E    
Sbjct: 524 REYEKRLKELEDTKMELERLRAQQEVLLSQLEREKEEIQRKAMQEAMEYLKKLEAEYREL 583


>gi|117926599|ref|YP_867216.1| hypothetical protein Mmc1_3323 [Magnetococcus sp. MC-1]
 gi|117610355|gb|ABK45810.1| hypothetical protein Mmc1_3323 [Magnetococcus sp. MC-1]
          Length = 597

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-ILQETSDNL 92
            +  N  +   +  +  +L  A+  +++ +  + D L+LL+   E +D    LQE     
Sbjct: 73  EIINNQEKLAAIKEKESYLKEAVDDLQKKESAIRDKLVLLQQFKEFNDADKFLQEEIHQQ 132

Query: 93  QRIKLEVEYKQFESL 107
                EV     E +
Sbjct: 133 SEQDKEVSKFIDEKI 147


>gi|268551829|ref|XP_002633896.1| Hypothetical protein CBG19958 [Caenorhabditis briggsae]
          Length = 567

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 18  NAVQRLSFLNT-KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI-QDRLCDNLILLEL 75
               R   L   KTE+ +L       + + ++   L      + EI Q  + D    LEL
Sbjct: 241 ELKSRYEELEKLKTENSNLLAENKLNQEISKKFAELQEEKRTLSEISQQEIFDLKKELEL 300

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
              E+     +   +  +  K   +  +   LL
Sbjct: 301 VKAENTKLSSEIEQNAEKSAKNHEKLLEDRVLL 333


>gi|259502711|ref|ZP_05745613.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus antri DSM 16041]
 gi|259169356|gb|EEW53851.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus antri DSM 16041]
          Length = 645

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 3/70 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK- 60
           KL R+++ L          ++ S +  +   P +  ++     L +E   L      ++ 
Sbjct: 572 KLQRKVDDLED--QLAQLEEQQSTIEAEMSKPEVATDIGRLTDLQKELDQLKAQSDEVEL 629

Query: 61  EIQDRLCDNL 70
                  +  
Sbjct: 630 AWTAAAEELE 639


>gi|168062916|ref|XP_001783422.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665065|gb|EDQ51762.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1229

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 14/96 (14%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R++    K +D          + L    Q L +       +Q  + +   L E+ 
Sbjct: 759 DELRARVAENEKKLQD--------RTQELSLAEQQLSSRSGEFDTLQANVKELEELREM- 809

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGE 111
            E+ D   LQ        +K + +   + ++L   E
Sbjct: 810 KEDIDRKNLQTA----AILKRQADQIVELQALYKEE 841


>gi|310793469|gb|EFQ28930.1| hypothetical protein GLRG_04074 [Glomerella graminicola M1.001]
          Length = 1444

 Score = 36.5 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +L  +LN      + +   QR+  L  +  D P    +   A+ + +    L        
Sbjct: 629 QLENELNSRRSSDNSEALTQRIRQLEDELNDRPTPGNSDAHAQRIQQLESELKAEKEKCA 688

Query: 61  EIQDRL-------CDNLILLELA------LEEDDCSILQETSDNLQRIKLEVEYKQ 103
             +  L        D    +E A      L E+  ++ +E  +  + ++ E++  +
Sbjct: 689 AFERDLGVRATAHDDVKGRMEEANSTKKELLENMEALQREFVEERKSLENEIKGLK 744


>gi|256422750|ref|YP_003123403.1| ABC transporter [Chitinophaga pinensis DSM 2588]
 gi|256037658|gb|ACU61202.1| ABC transporter related [Chitinophaga pinensis DSM 2588]
          Length = 667

 Score = 36.5 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 15/84 (17%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTK-------TEDPHLWQNVIEAKMLMRERQHLDN 54
           +  ++L      F      ++L+ LN K         +P ++ +  + + L  E   L  
Sbjct: 588 EKQKELQKYKRQFQ--QLEEQLAKLNEKKATIETAMNNPDVYADRKKFQQLEAEYNQLG- 644

Query: 55  AISFIKEIQDRLCDNLILLELALE 78
                KE++    +   + E+ +E
Sbjct: 645 -----KELKQATEEYEKVFEILME 663


>gi|320040240|gb|EFW22173.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 1259

 Score = 36.5 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 16/117 (13%)

Query: 2   KLSRQLNCLGGL-FDWDNAVQRL----SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L  +   L     D +     L      L  K  +        + + + R +  L++ I
Sbjct: 714 ELDARQEELNATKSDLEAKQAELVDRQKELEEKQSEVE-----AKQEEINRLKSELESKI 768

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           + +++ +  L      LE    E     LQ   D LQ +K E+E K+ + L S +AD
Sbjct: 769 AELEDKRRELEQKQGELESKQTE-----LQAIQDELQEVKAELEEKKSQ-LESKQAD 819


>gi|295402744|ref|ZP_06812684.1| ABC transporter related protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112513|ref|YP_003990829.1| ABC transporter [Geobacillus sp. Y4.1MC1]
 gi|294975208|gb|EFG50846.1| ABC transporter related protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217614|gb|ADP76218.1| ABC transporter related protein [Geobacillus sp. Y4.1MC1]
          Length = 644

 Score = 36.5 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 14/43 (32%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
                 +L  +  +  DP L  +    K L+++   L      
Sbjct: 94  LKEMETQLREMELQMGDPDLLADSSRYKKLLKDYDTLQERYKE 136


>gi|254883053|ref|ZP_05255763.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA]
 gi|319643572|ref|ZP_07998192.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A]
 gi|254835846|gb|EET16155.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA]
 gi|317384741|gb|EFV65700.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A]
          Length = 647

 Score = 36.5 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 8/75 (10%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 2   KLSRQLNCLGGLF-DWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L     D +  +++L      +      P    ++   +   + ++ LD  +
Sbjct: 572 ELNKKIRKLEKRVADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631

Query: 57  SFIKEIQDRLCDNLI 71
              + +   L +   
Sbjct: 632 EEWETVSMELEEMQG 646


>gi|224116814|ref|XP_002331820.1| predicted protein [Populus trichocarpa]
 gi|222875058|gb|EEF12189.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score = 36.5 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 47/124 (37%), Gaps = 9/124 (7%)

Query: 20  VQRLSFLNTKTEDPHL--WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
            +R+  L  + +   +   +   + K L  E+  L N ++ ++     + +   +++L  
Sbjct: 20  EKRIVELEWEIQKKSIEYHELEAKLKELGEEKNGLANEVNGLRAKIGEVKEVGGVVDLTA 79

Query: 78  EEDDCSILQETSD------NLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130
           EE++  ++Q   +        +    E+E   +    L   A   +  + +  G  G + 
Sbjct: 80  EEEEDKMVQLMIENKVLEYEKKSAAREIEVWKEKYKELELYALKLNGGVVLKGGKRGEDG 139

Query: 131 QDWA 134
            D  
Sbjct: 140 ADAT 143


>gi|269216425|ref|ZP_06160279.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
 gi|269129954|gb|EEZ61036.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
          Length = 891

 Score = 36.5 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 6/85 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +RL  L  +      W +  +A     E ++  + I  ++ ++  +       E A  E
Sbjct: 440 QERLEELRRQMATSKEWLDARKA-----EWRNEKDVIESVQRLKTEIDQAHTEEEQATRE 494

Query: 80  DDCSILQETS-DNLQRIKLEVEYKQ 103
            D S   E     +  ++  +   +
Sbjct: 495 GDLSRASEIRYARIPDLQRRLAEAE 519


>gi|168053995|ref|XP_001779419.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669217|gb|EDQ55809.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 517

 Score = 36.5 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++     +      +        L+ + ED +   ++      +   +   +++  + E
Sbjct: 172 EIASSQTQVEQPLCLECMRALSEELDKQMEDVN--NDIKAYHTCLDRLE--KDSVEALNE 227

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
                 D   L E    E+D   L+    ++++ K E   +  +  L  E
Sbjct: 228 -----EDF--LKEKLKAEEDERRLEAAIRDIEQQKEETMAQIHDVELKTE 270


>gi|297675009|ref|XP_002815495.1| PREDICTED: myosin-X-like [Pongo abelii]
          Length = 2420

 Score = 36.5 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 13/110 (11%)

Query: 17   DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN--AISFIKEIQDRLCDNLILL- 73
            +  +++   L    E         EA  L RE +       +  I  ++  + D   +  
Sbjct: 1003 EEEMRKQQELEALQES------QKEA-ELTRELEKQKENKQVEEILRLEKEIEDLQRMKE 1055

Query: 74   --ELALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
              EL+L E     LQE  D  L+R++ E      E L S   D  D  + 
Sbjct: 1056 QQELSLTEASLQKLQERRDQELRRLEEEACRAAQEFLESLNFDEIDECVR 1105


>gi|297830350|ref|XP_002883057.1| hypothetical protein ARALYDRAFT_898075 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297328897|gb|EFH59316.1| hypothetical protein ARALYDRAFT_898075 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 2057

 Score = 36.5 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 34/171 (19%)

Query: 1    MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHL-----------WQNVIEA-----KM 44
            M L ++++ +   FD      R   +N   ++  L             NV E      + 
Sbjct: 1208 MGLMQRMDPVKSFFD------RFEEVNATMKEADLTICELVKANEKSNNVTEMWLQTHEE 1261

Query: 45   LMRERQHLDNAISFIKE-IQDRLCDNLILLE-----LALEEDDCSILQETSDNLQR-IKL 97
            LM + ++L + +  +K  +     +N ILL      LA  E+  S+L+E    ++R ++ 
Sbjct: 1262 LMVKEKYLMDDLEQVKSTLSACEEENQILLNQTHSTLADMENSVSLLEEYIQEMKRGVEE 1321

Query: 98   EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +E      LL+G+       L++ + +  +  Q  +  + R +T +A  +
Sbjct: 1322 TLEALFSHVLLAGKE-----LLQLISNSRPSLEQIVSETMEREFTMYATYQ 1367


>gi|282858138|ref|ZP_06267333.1| ABC transporter, ATP-binding protein [Pyramidobacter piscolens
           W5455]
 gi|282584060|gb|EFB89433.1| ABC transporter, ATP-binding protein [Pyramidobacter piscolens
           W5455]
          Length = 644

 Score = 36.5 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 21/66 (31%), Gaps = 11/66 (16%)

Query: 16  WDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQD 64
                +R+  L         +   P +  +    + LM++       L+ A    +E+ +
Sbjct: 576 LAALEERIDDLERRKGRDEKELCRPEVIADSNRIQTLMKDLADAGAELEAATGRWEELME 635

Query: 65  RLCDNL 70
            +    
Sbjct: 636 IIEKIE 641


>gi|59006677|emb|CAI46202.1| hypothetical protein [Homo sapiens]
          Length = 637

 Score = 36.5 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 19/129 (14%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +D++
Sbjct: 119 LDTENKRLR-AELQAL---------QKTYQKILREKESALEAKYQAMERAATFEHDRDKV 168

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V   A 
Sbjct: 169 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTTAA- 226

Query: 127 GTESQDWAN 135
           GT+ + W  
Sbjct: 227 GTQCEYWTG 235


>gi|293346439|ref|XP_001067659.2| PREDICTED: hypothetical protein LOC311578, partial [Rattus
           norvegicus]
          Length = 1551

 Score = 36.5 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 10/104 (9%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-----LQETSDNLQR 94
            +   L +E   +   +   + +   L   L   ELA             L+   +    
Sbjct: 294 KKLTKLAKENDSMKEELLKYRSLYGDLDAALSAEELADAPHSRETELKVHLKLVEEEANL 353

Query: 95  IKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +   +   + E+  L  E D     ++ H G GG E++   + L
Sbjct: 354 LSRRIVELEVENRGLRAEMDD----MKDHGGGGGPEARLSFSSL 393


>gi|326666660|ref|XP_698063.4| PREDICTED: bromodomain-containing protein 1 [Danio rerio]
          Length = 1142

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 17/153 (11%)

Query: 39  VIEAKMLM--RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
              ++ +    E Q L   +    +++  L    ILLEL  +      L+     LQ+  
Sbjct: 482 PKNSQRVSILEETQALKEQLKEWHQLRHDLERARILLELIRK---REKLKREEVLLQQTL 538

Query: 97  LEVEYKQFESLLS------GEADSNDAYLE---VHAGAGGTESQDWANMLLRMYTRWAEK 147
           +E +   F  +L        E D    + E   +       +          M  R  E 
Sbjct: 539 MEFQLTPFTVILRAVLDQLQEKDQAHIFAEPVNIKEVPDYMDHVLHPMDFSTMSKR-IEA 597

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +K   L+  + +   I    +   G + + +
Sbjct: 598 QGYKY--LDEFEADFNLITDNCMKYNGKDTFFY 628


>gi|309356484|emb|CAP37104.2| hypothetical protein CBG_19958 [Caenorhabditis briggsae AF16]
          Length = 572

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 2/93 (2%)

Query: 18  NAVQRLSFLNT-KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI-QDRLCDNLILLEL 75
               R   L   KTE+ +L       + + ++   L      + EI Q  + D    LEL
Sbjct: 241 ELKSRYEELEKLKTENSNLLAENKLNQEISKKFAELQEEKRTLSEISQQEIFDLKKELEL 300

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
              E+     +   +  +  K   +  +   LL
Sbjct: 301 VKAENTKLSSEIEQNAEKSAKNHEKLLEDRVLL 333


>gi|124087782|ref|XP_001346873.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145474891|ref|XP_001423468.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057262|emb|CAH03246.1| hypothetical protein with coiled-coil domains [Paramecium
           tetraurelia]
 gi|124390528|emb|CAK56070.1| unnamed protein product [Paramecium tetraurelia]
          Length = 786

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N +GG+ D D   ++L  L           +      L++E + L        +++  L 
Sbjct: 197 NKIGGM-DPDTLAKKLKELEKL--QKSFGGSPE---DLLKELERLKKKAKEADDLKKELD 250

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLE 98
               L E   +++D  +L +   N Q +++E
Sbjct: 251 --KQLRENDKQKNDLDVLDDLRQNAQDLQME 279


>gi|56412513|ref|YP_149588.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361448|ref|YP_002141084.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56126770|gb|AAV76276.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092924|emb|CAR58353.1| putative release factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 140

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 24/115 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258
           + I++++  I   RA GAGGQHVN T  A+ +                      H+ +  
Sbjct: 8   VSIADNELEITAIRAQGAGGQHVNKTSGAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67

Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
             ++++ Q+ RSQ  N+  A   L A + EL  +++   A     +  E     +
Sbjct: 68  GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSK 122


>gi|84687770|ref|ZP_01015641.1| peptidyl-tRNA hydrolase domain protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664206|gb|EAQ10699.1| peptidyl-tRNA hydrolase domain protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 137

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 26/102 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAV-------RITHIPT------------- 257
           + +I I + +      RASG GGQ+VN   +AV       R  H+P              
Sbjct: 5   NDQITIQDWELTESFVRASGPGGQNVNKVSTAVELRFEAERSPHLPDPVKRRLKRLAGRR 64

Query: 258 -----GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKRE 293
                 ++V  Q  RSQ +N+  A   L   + +  E  KR 
Sbjct: 65  WTTDGALIVFVQDTRSQARNRELAEERLAEMIRKACEKPKRR 106


>gi|294142550|ref|YP_003558528.1| prokaryotic and mitochondrial release factors family protein
           [Shewanella violacea DSS12]
 gi|293329019|dbj|BAJ03750.1| prokaryotic and mitochondrial release factors family protein
           [Shewanella violacea DSS12]
          Length = 138

 Score = 36.5 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------H--IPT 257
           + + +++      R+SGAGGQH+N   +A ++                      H    +
Sbjct: 8   VLLQDNELEWQFIRSSGAGGQHLNKVSTAAQLIFDIRKSSLPELYQQRLLAKADHRITKS 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           G V ++CQ  RSQ  N+  A       +  +    ++ IA            G Q R 
Sbjct: 68  GKVIIKCQASRSQDSNRQTALAQFIELVASVGHTPKKRIATKPT-------RGSQRRR 118


>gi|281346619|gb|EFB22203.1| hypothetical protein PANDA_000004 [Ailuropoda melanoleuca]
          Length = 1286

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 21/137 (15%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAI 56
           ++ S  L+ + G F      QR    + +     L  N  E    ++E++     L+  +
Sbjct: 253 VEKSNALSVMEGKFIQLQEKQR----SLRISHDALMANGDELNRQLKEQRLKCCSLEKQL 308

Query: 57  -------SFIKEIQDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLEVEYKQ 103
                    I+E+QDR+ D     EL  E  D       S   E    L+  +L+V+  Q
Sbjct: 309 HSMTFSERRIEELQDRINDLEKERELLKENYDKLYNSAFSAAHEEQWKLKEQQLKVQIAQ 368

Query: 104 FESLLSGEADSNDAYLE 120
            E+ L  +       L+
Sbjct: 369 LETALKSDLTDKTEILD 385


>gi|300793799|ref|NP_001178585.1| peptidyl-tRNA hydrolase ICT1, mitochondrial [Rattus norvegicus]
 gi|109492192|ref|XP_001081688.1| PREDICTED: immature colon carcinoma transcript 1 [Rattus
           norvegicus]
          Length = 206

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 25/129 (19%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS--------------------A 249
           W  P   +    +I      I   R+SG GGQ+VN  +S                     
Sbjct: 59  WKVPEHAEQASSDIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQK 118

Query: 250 VRITH-----IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           + +TH         +V+  +  R Q +N A+    +R  + +     +E      +  + 
Sbjct: 119 IALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRL 178

Query: 305 EIGWGRQIR 313
            I    + R
Sbjct: 179 RIEKMNRER 187


>gi|320451090|ref|YP_004203186.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
 gi|320151259|gb|ADW22637.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
          Length = 861

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +   L    D D+  +RL  +  +    +      E + L  E +     +  ++
Sbjct: 418 LQLEIEREALKKEKDPDS-QERLKAIEEEIAHLN-----QEIQKLKAEWEAEREVLKKLR 471

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYK 102
           E Q RL +    +ELA  + D +   E     L R++ EVE  
Sbjct: 472 EAQQRLDEVRRQIELAERQYDLNRAAELRYGELPRLEAEVEAL 514


>gi|319794076|ref|YP_004155716.1| ATP-dependent protease la [Variovorax paradoxus EPS]
 gi|315596539|gb|ADU37605.1| ATP-dependent protease La [Variovorax paradoxus EPS]
          Length = 813

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 47/112 (41%), Gaps = 5/112 (4%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMR---ERQHLDNAI-SFIK 60
           +L+    + D D+   RL  L  + E    +     + +  ++   E+   D  +   +K
Sbjct: 181 KLDNKQAVLDLDDVKARLENLFGQLEREVDILNVDKKIRGRVKRQMEKNQRDFYLNEQVK 240

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            IQ  L +     ++   E    + + + + L++ + E++  +  S +S EA
Sbjct: 241 AIQKELGEGEEGADIEEIEKKIKLAKMSKEGLKKAEGELKKLKLMSPMSAEA 292


>gi|268318011|ref|YP_003291730.1| ATP-dependent chaperone ClpB [Rhodothermus marinus DSM 4252]
 gi|262335545|gb|ACY49342.1| ATP-dependent chaperone ClpB [Rhodothermus marinus DSM 4252]
          Length = 880

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 24/131 (18%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEIQDRLCD 68
            D   +++  L  + E      +  + K +  +  +L+     +       KE+  R+  
Sbjct: 413 LDQLERQIRQLEIEREAVKRDNDQEKLKAINEQLANLEEQRRALRARWQQEKELIQRIRS 472

Query: 69  NLILLELALEEDDCSILQ---------------ETSDNLQRIKLEVEYKQFE-SLLSGEA 112
               +E    E +    Q               E    L+  + ++E  Q + +LL  E 
Sbjct: 473 IKEEIEQLRIESEQLERQGEYGRVAEIRYGRIPELEKQLKEAQQQLEEVQKDGALLKEEV 532

Query: 113 DSNDAYLEVHA 123
            + D   E+ A
Sbjct: 533 TAED-IAEIVA 542


>gi|160933764|ref|ZP_02081152.1| hypothetical protein CLOLEP_02625 [Clostridium leptum DSM 753]
 gi|156867641|gb|EDO61013.1| hypothetical protein CLOLEP_02625 [Clostridium leptum DSM 753]
          Length = 637

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNLI 71
            D   +  + L  +  DP    +  +A  L +  + L    +  +   + +   L +   
Sbjct: 577 IDGLDRETAELAGRLSDPETASDYEKALELTQRMEELRARQEKLMESWEALCQELEEKEA 636


>gi|111221284|ref|YP_712078.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a]
 gi|111148816|emb|CAJ60494.1| putative transport protein (ABC superfamily, atp_bind) [Frankia
           alni ACN14a]
          Length = 560

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 7/70 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCDNLILLEL 75
             + R   +N K   P       +   L+ E+  L + I      E+  +L   +  L L
Sbjct: 98  RVLARYEEINEKMSAPD-----ADFDSLLTEQAELIDKIEAANAWELDSQLDQAMDALRL 152

Query: 76  ALEEDDCSIL 85
              + D S+L
Sbjct: 153 PPGDADVSLL 162


>gi|197099863|ref|NP_001125608.1| utrophin [Pongo abelii]
 gi|55728615|emb|CAH91048.1| hypothetical protein [Pongo abelii]
          Length = 944

 Score = 36.5 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 16/97 (16%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  +N +      W ++         R HL+ +      +   L + +  L +  E
Sbjct: 53  LQHRLDDMNQR------WNDLKA--KSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDE 104

Query: 79  E--------DDCSILQETSDNLQRIKLEVEYKQFESL 107
           E         D   LQ   D+ + ++ E++ K++  L
Sbjct: 105 ELKKQMPIGGDIPALQLQYDHCKALRRELKEKEYSIL 141


>gi|321259235|ref|XP_003194338.1| eukaryotic translation initiation factor 3 [Cryptococcus gattii
           WM276]
 gi|317460809|gb|ADV22551.1| Eukaryotic translation initiation factor 3, putative [Cryptococcus
           gattii WM276]
          Length = 952

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 19/116 (16%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQN-----------VIEAKMLMRERQ 50
           +LS +L  +G   D      R          P L Q+              A  + RE+ 
Sbjct: 648 ELSERLRIVGKRVDHLERAMRKEE------RPLLAQDYERQKAEDRAAHDRANQIAREQA 701

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
                    KE++ RL   L   E   E  +  + +E     +  K ++E ++ + 
Sbjct: 702 I--EQQRAAKELKQRLGRMLEDYEAVKERVESQMQEELKAAKEEAKRKIEEEKAQL 755


>gi|163751167|ref|ZP_02158396.1| hypothetical protein KT99_19199 [Shewanella benthica KT99]
 gi|161328996|gb|EDQ00069.1| hypothetical protein KT99_19199 [Shewanella benthica KT99]
          Length = 138

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 31/118 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------H--IPT 257
           + + E++      R+SGAGGQH+N   +A ++                      H    +
Sbjct: 8   VLLQENEIEWQFIRSSGAGGQHLNKVSTAAQLIFDIRKSSLPELYQQRLLAKADHRITKS 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           G V ++CQ  RSQ  N+  A       +  +    ++ IA            G Q R 
Sbjct: 68  GKVIIKCQASRSQDSNRQTALAQFIELVASVGHTPKKRIATKPT-------RGSQRRR 118


>gi|145347021|ref|XP_001417978.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578206|gb|ABO96271.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 954

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 27/122 (22%)

Query: 2   KLSRQLNCLGGLF-----DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L +++N L   F     D    V RL+ L  +  D         A+ +  E        
Sbjct: 119 ELKQKINALEEDFSRRGEDEQALVSRLAELEGELGD---------ARGVSEEHMSAQ--- 166

Query: 57  SFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
           + I E+   L            +A   D    L E       ++ + +      LL  E 
Sbjct: 167 ARIDELTAELESLRDTSACPPGVASAADMSRSLAEAEKTKSSLREDYD------LLRDEY 220

Query: 113 DS 114
           D 
Sbjct: 221 DK 222


>gi|239637780|ref|ZP_04678744.1| ATP-binding ABC transporter protein [Staphylococcus warneri L37603]
 gi|239596629|gb|EEQ79162.1| ATP-binding ABC transporter protein [Staphylococcus warneri L37603]
          Length = 644

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 6/59 (10%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            ++   ++  ++ +   P ++ + ++      E   L +  +  +E++  + +   L E
Sbjct: 590 IESCEAKIEDIDHQLTQPDVYSDPVK----SNELAELKS--NTEQELEQAMLEWEELQE 642


>gi|114766729|ref|ZP_01445667.1| hypothetical protein 1100011001326_R2601_12116 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541048|gb|EAU44104.1| hypothetical protein R2601_12116 [Roseovarius sp. HTCC2601]
          Length = 140

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 33/140 (23%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------------------------THIP 256
           I I + +      RASG GGQ+VN   SAV +                            
Sbjct: 8   ISIEDWEMTEQFIRASGPGGQNVNKVSSAVELRFEAERSPNLPPAVKTRLRKLAGRRWTK 67

Query: 257 TGVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
            G VV Q  + RSQ +N+  A    R +L EL  +  E+      +  T    G + R  
Sbjct: 68  EGAVVLQVDETRSQARNREIA----RERLAELIRKALEKPKRRIPTRPTL---GSKRRRL 120

Query: 316 VLQPYQ-MVKDLRTNIEKTS 334
             +  +  VK LR  ++  +
Sbjct: 121 EGKKQRGEVKALRGKVDPGN 140


>gi|2832698|emb|CAA16796.1| starch synthase-like protein [Arabidopsis thaliana]
 gi|7268617|emb|CAB78826.1| starch synthase-like protein [Arabidopsis thaliana]
          Length = 1071

 Score = 36.5 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L  L D        + +    ++  L   V + +  ++E      +   I++ 
Sbjct: 354 LWAKVETLQLLLDRATKQAEQAVI-VLQQNQDLRNKVDKIEESLKEANVYKESSEKIQQY 412

Query: 63  QDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFES 106
            + +   + LLE  LE+ D  I    Q   ++++  +  +E  + ES
Sbjct: 413 NELMQHKVTLLEERLEKSDAEIFSYVQLYQESIKEFQETLESLKEES 459


>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
          Length = 815

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
             IKE++D+L D     E A+   D     +  D+ Q++K E+E  +
Sbjct: 412 DDIKELEDKLEDIRKEKEEAVANQDYEKAAKLRDDEQKLKEEIEKLK 458


>gi|326391034|ref|ZP_08212582.1| glycosyltransferase 36 [Thermoanaerobacter ethanolicus JW 200]
 gi|325992902|gb|EGD51346.1| glycosyltransferase 36 [Thermoanaerobacter ethanolicus JW 200]
          Length = 2888

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 49/127 (38%), Gaps = 14/127 (11%)

Query: 1    MKLSRQLNCLGGLFDWDNAVQRL--SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
            ++L++ L     + D +   + +  + LN KT  P  W+  +    +  +    ++ +  
Sbjct: 1154 IELAKGLKDTIKMLDIEGITEDIFRNILNKKTLMPSDWE--VFLSKISEKLSSTEDEVGN 1211

Query: 59   IKEIQDRLCDNL-ILLELAL--EEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADS 114
            I+ +++ +      + E     E D+    QE     + + +     K+ E +       
Sbjct: 1212 IERLKNIIGALKREMKEFLAWTEFDERQKEQEIFKRYKEVFEEHSSPKELEKV------Y 1265

Query: 115  NDAYLEV 121
             +  LE+
Sbjct: 1266 KNYLLEI 1272


>gi|237799083|ref|ZP_04587544.1| hypothetical protein POR16_09642 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021937|gb|EGI01994.1| hypothetical protein POR16_09642 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 137

 Score = 36.5 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---------------------- 255
           S  + + +++  +   RA GAGGQ+VN   SA+ +                         
Sbjct: 5   SNNVHLPDAEIELTAIRAQGAGGQNVNKVSSAMHLRFDINASSLPPFYKERLLALSDSRI 64

Query: 256 --PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
                +V++ QQ R+Q +N+A A      +L EL +   +       +  T    G + R
Sbjct: 65  TSDGVIVIKAQQYRTQEQNRADAL----LRLSELIVNAAKVEKKRRPTRPTL---GSKTR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|315656349|ref|ZP_07909238.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315492908|gb|EFU82510.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 560

 Score = 36.5 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCD 68
            G+ +    + R + ++ +  DP       +   LM E   L  AI      ++  +L  
Sbjct: 91  EGVGEIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145

Query: 69  NLILL 73
            +  L
Sbjct: 146 AMDAL 150


>gi|300711973|ref|YP_003737787.1| chromosome segregation protein SMC [Halalkalicoccus jeotgali B3]
 gi|299125656|gb|ADJ15995.1| chromosome segregation protein SMC [Halalkalicoccus jeotgali B3]
          Length = 1195

 Score = 36.5 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 9/120 (7%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +     G        ++ + L+ K           + + +   R+ LD     +  +
Sbjct: 238 LREEKEEFEGYLKAAELEEKRAELDAKESRIE-----QKREKVEELRRELDEKQGAVTRL 292

Query: 63  QDRLCDNLILLELALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           ++ L D    +E   E++  +I +E       + R +  +E  + E++   E+D  +A++
Sbjct: 293 EEDLEDLNAEIERKGEDEQLAIKREIEGIKGEISRFEDRIENAE-EAIDEAESDRREAFV 351


>gi|288919207|ref|ZP_06413544.1| Mycocerosate synthase., 6-deoxyerythronolide-B synthase [Frankia sp.
            EUN1f]
 gi|288349377|gb|EFC83617.1| Mycocerosate synthase., 6-deoxyerythronolide-B synthase [Frankia sp.
            EUN1f]
          Length = 3533

 Score = 36.5 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 33/124 (26%), Gaps = 5/124 (4%)

Query: 110  GEADS---NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK-TEALEIHDGEEAGI 165
               D+       +       G E++ W    + +    A    +         DGE +  
Sbjct: 2734 DPPDAHGRRGVRVHTRPDPAGAEAEIWTPNAVGVLASEAAAAGWPAVRGGGEADGEASWP 2793

Query: 166  KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEIS 224
                  +     YG L+           S   +  R    F+ + +      + +  +I 
Sbjct: 2794 PPGASPVDVDQLYGRLRERGYTFGPAFRSMRAAWQRGDEWFTEVQLPDEHGGTADRYDIH 2853

Query: 225  ESDC 228
             +  
Sbjct: 2854 PALL 2857


>gi|227513690|ref|ZP_03943739.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227083009|gb|EEI18321.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 652

 Score = 36.5 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           KL+R++  L    D  +  +  + + ++   P ++ ++ +A  L ++     Q +    S
Sbjct: 582 KLNREVTDLESQLDELSKSK--NNIESQMAQPEVFNDLDKASDLQKKLEMIDQKIKETES 639

Query: 58  FIKEIQDRLCDNL 70
             ++   +L D  
Sbjct: 640 KWEQKSLQLEDIE 652


>gi|195161266|ref|XP_002021489.1| GL26538 [Drosophila persimilis]
 gi|198472480|ref|XP_001355947.2| GA17686 [Drosophila pseudoobscura pseudoobscura]
 gi|194103289|gb|EDW25332.1| GL26538 [Drosophila persimilis]
 gi|198139032|gb|EAL33006.2| GA17686 [Drosophila pseudoobscura pseudoobscura]
          Length = 301

 Score = 36.5 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 24/117 (20%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH-LDN------------AISFIKEIQDR 65
            ++R   L+ +   P L  +    + +++E    L+              +  I+++Q +
Sbjct: 165 KLKRQLLLSLQAGCPALADDPQHQQEVLKEYSRYLEPYTPEEIDWYGHTYLEAIRKLQGQ 224

Query: 66  LCDNL-----------ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L D              L+E   E       +    ++     E +    E+L   E
Sbjct: 225 LRDAEKVQPHKVEFRSKLIEQLREAGIREAGKLEKPDILAASSEHKDADIEALTKLE 281


>gi|109065845|ref|XP_001102100.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD1 [Macaca
           mulatta]
          Length = 956

 Score = 36.5 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 54/123 (43%), Gaps = 9/123 (7%)

Query: 3   LSRQLNCL-GGLFDWDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMRERQHLDNAISFIK 60
           L  +++ L   + D +  V+RL     + ++   L     + +   ++ Q L  +     
Sbjct: 162 LKGRISELQWSVMDQEMRVKRLESEKQELQEQLDL--QHKKWQEANQKIQELQASQEARA 219

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDA 117
           + + ++ D     +L+L+E D +I++        L R++ E++  + ES+   E    + 
Sbjct: 220 DHEQQIKDLEQ--KLSLQEQDAAIVKNMKSELVRLPRLERELKQLREESMHLREMRETNG 277

Query: 118 YLE 120
            L+
Sbjct: 278 LLQ 280


>gi|315655737|ref|ZP_07908635.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 51333]
 gi|315489801|gb|EFU79428.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 51333]
          Length = 560

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK--EIQDRLCD 68
            G+ +    + R + ++ +  DP       +   LM E   L  AI      ++  +L  
Sbjct: 91  EGVGEIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145

Query: 69  NLILL 73
            +  L
Sbjct: 146 AMDAL 150


>gi|307243262|ref|ZP_07525433.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus stomatis
           DSM 17678]
 gi|306493390|gb|EFM65372.1| ATP-dependent chaperone protein ClpB [Peptostreptococcus stomatis
           DSM 17678]
          Length = 862

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 13/118 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + +  RL  L  +  D     + + A+   +E+      I+ +K ++  L +    +E  
Sbjct: 440 EKSKSRLEELEKELADLKEENDSMTAR-YEKEKNR----ITELKVLKSNLDEARAKVEKY 494

Query: 77  LEEDDCSILQE--------TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             E D +   E          + ++  + + + +  ESLL  E   N+    +    G
Sbjct: 495 EREYDFNKAAEVKFGQIPKLEEEIKNFEDKYDSESGESLLKEEVTENEIADIISKWTG 552


>gi|125572840|gb|EAZ14355.1| hypothetical protein OsJ_04275 [Oryza sativa Japonica Group]
          Length = 724

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 14/114 (12%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTED---------PHLWQNVIEAKMLMRERQHLD 53
           L+ QL  L    D   +V+  + +  +  +         P    +    K+L  E ++ +
Sbjct: 237 LNEQLEDLKKQLD--ESVRENNEMEHRLLNCSSLSYERTPS--DDQKLIKLLQEELRNYE 292

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDD-CSILQETSDNLQRIKLEVEYKQFES 106
             +   + ++    +  +L E  LEE       +     LQ I+ + +  + E 
Sbjct: 293 KEVDEARRLKSSHTNVELLKEKILEEQGCRERAEMELSKLQEIEAKAQKLELEL 346


>gi|309380006|emb|CBX21417.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 636

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 5/54 (9%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDR 65
                   + +N +  DP ++++  +A  L    + ++      +   + ++ +
Sbjct: 577 IAALEAEQAEINAQLSDPEIFKDYEKAGALQNRAEEIETLLLEKLERWERLEAK 630


>gi|15606774|ref|NP_214154.1| ATPase subunit of ATP-dependent protease [Aquifex aeolicus VF5]
 gi|54035745|sp|O67588|CLPB_AQUAE RecName: Full=Chaperone protein ClpB
 gi|2984005|gb|AAC07550.1| ATPase subunit of ATP-dependent protease [Aquifex aeolicus VF5]
          Length = 1006

 Score = 36.5 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIE-AK------MLMRERQHLDNAI 56
            ++L  +G   +     +++  L  +  + +L  +  + A+       L +E+Q L   +
Sbjct: 533 RKKLKVIGTPPEIQEIERKIKALEEQIIEANLKGDYEKEAQLKIEKAKLEKEKQELLGKV 592

Query: 57  ----SFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
               + I E++ ++ +    ++ A E+ D     E  
Sbjct: 593 GGVEAKIAELKKKIEELDEKIKEAAEKGDYEKEAELK 629


>gi|299534446|ref|ZP_07047779.1| ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1]
 gi|298730074|gb|EFI70616.1| ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1]
          Length = 647

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 3/50 (6%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           +  +     L   +     L  L  +  DP ++ N      +M E   L 
Sbjct: 85  NEMMTIFESLLAQEQL---LRSLEQQMADPTVYDNPTMYAKVMSEYDQLQ 131


>gi|298488135|ref|ZP_07006172.1| predicted peptidyl-tRNA hydrolase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157414|gb|EFH98497.1| predicted peptidyl-tRNA hydrolase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 137

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---------------------- 255
           S  + + +++  +    A GAGGQ+VN   SAV +                         
Sbjct: 5   SNNVHLPDAEIELTAICAQGAGGQNVNKVSSAVHLRFDINASSLPPFYKERLLALSDSRI 64

Query: 256 -PTGVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
              GV+V + QQ R+Q +N+A A      +L EL +   +       +  T    G + R
Sbjct: 65  TRDGVIVLKAQQYRTQEQNRADAL----LRLSELIVNAAKVEKKRRPTRPTL---GSKTR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|263173423|gb|ACY69938.1| putative peptidyl-tRNA hydrolase [Cimex lectularius]
          Length = 189

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIPTGV---------------------- 259
           I      I   R+SG GGQHVNT ++ V +  H+ +                        
Sbjct: 56  IPVDKVDITYSRSSGPGGQHVNTVNTKVDVRFHVESAEWLSDDVKKRILENLKNKINKDG 115

Query: 260 --VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
             VV+  + RSQ  N+A A  +LR  ++   + K        E  +       Q R
Sbjct: 116 YLVVRSDKTRSQIYNQADAMMILRRLIHSALVTKPAITQETLEVLRKRKEKANQER 171


>gi|227537944|ref|ZP_03967993.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300772579|ref|ZP_07082449.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|227242183|gb|EEI92198.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|300760882|gb|EFK57708.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 560

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 1/106 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            G+ +    ++    +N K   P +++N  E   L+  +  L + I      +       
Sbjct: 94  EGVAEITAILKEYEEINDKFGLPEVYENADEMDKLLARQGELQDKIDATNAWELDSKLER 153

Query: 71  ILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSN 115
            +  L   E +  I   +    +R+ L  +  ++ + LL  E  ++
Sbjct: 154 AMDALRCPEPEAKIANLSGGERRRVALCRLLLQEPDVLLLDEPTNH 199


>gi|42566924|ref|NP_193558.3| ATSS4; transferase, transferring glycosyl groups [Arabidopsis
           thaliana]
 gi|110741548|dbj|BAE98723.1| starch synthase-like protein [Arabidopsis thaliana]
 gi|332658615|gb|AEE84015.1| starch synthase 4 [Arabidopsis thaliana]
          Length = 1040

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L  L D        + +    ++  L   V + +  ++E      +   I++ 
Sbjct: 354 LWAKVETLQLLLDRATKQAEQAVI-VLQQNQDLRNKVDKIEESLKEANVYKESSEKIQQY 412

Query: 63  QDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFES 106
            + +   + LLE  LE+ D  I    Q   ++++  +  +E  + ES
Sbjct: 413 NELMQHKVTLLEERLEKSDAEIFSYVQLYQESIKEFQETLESLKEES 459


>gi|331006579|ref|ZP_08329869.1| hypothetical protein IMCC1989_469 [gamma proteobacterium IMCC1989]
 gi|330419612|gb|EGG93988.1| hypothetical protein IMCC1989_469 [gamma proteobacterium IMCC1989]
          Length = 100

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 6/93 (6%)

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
             S    I+G   Y        ++   ++   +  + +  S   +   P V ++I++   
Sbjct: 11  YSSTIARIEGGQVY------SAIYVGQKVVNEEEENTKGLSLMKVACDPSVYETIDLSSV 64

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
              C I      GAGG+  N   +   + + P+
Sbjct: 65  PLSCEIKVRLKKGAGGKMNNHCTAVTLLPNKPS 97


>gi|213051985|ref|ZP_03344863.1| hypothetical protein Salmoneentericaenterica_02995 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 40

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           +   L D   LLELA+E DD     E    L  ++ ++  
Sbjct: 1   MTQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQ 40


>gi|254167406|ref|ZP_04874258.1| hypothetical protein ABOONEI_2219 [Aciduliprofundum boonei T469]
 gi|197623669|gb|EDY36232.1| hypothetical protein ABOONEI_2219 [Aciduliprofundum boonei T469]
          Length = 593

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLILLELALEE 79
           + L  L    +D ++     +   L +E +  +  +  +K EI+ +  +   L E+   +
Sbjct: 197 KELEELKEAIKDGNVKALTEKITELTKELEMKNKELEELKNEIKIKEDEMKKLQEMLKYK 256

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESL 107
           +D  I +E     +  K+E + KQ + +
Sbjct: 257 EDELIRREEDLLYREKKIEAQIKQLQMI 284


>gi|167376336|ref|XP_001733956.1| synaptonemal complex protein [Entamoeba dispar SAW760]
 gi|165904727|gb|EDR29895.1| synaptonemal complex protein, putative [Entamoeba dispar SAW760]
          Length = 719

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 48/111 (43%), Gaps = 11/111 (9%)

Query: 2   KLSRQLNCLGGLFD----WDNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNA 55
           +L +++  L    +     +N  +R+  +       D ++  + I    + ++ + L+  
Sbjct: 260 ELKKRIEELEIKCNFKEELENLKKRVEEVEKTINKIDINILNDNIN--EINKQNEELNEK 317

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           ++   E+++    N   +E + ++++  +L E    LQ     VE  Q ++
Sbjct: 318 VN---ELKEEKMKNENSIEKSKQQEELKVLNELIRELQETISSVEENQIKN 365


>gi|157363011|ref|YP_001469778.1| peptidoglycan-binding LysM [Thermotoga lettingae TMO]
 gi|157313615|gb|ABV32714.1| Peptidoglycan-binding LysM [Thermotoga lettingae TMO]
          Length = 573

 Score = 36.5 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 12/96 (12%)

Query: 16  WDNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            +   +RL  L  +    +   + N    + L +E   ++N +S  K++ D   +   + 
Sbjct: 25  LEQINRRLDELEYRIAQIEKSTYNNQKNIEKLQQEVSKINNEVSSAKKLLDEQKNLPAV- 83

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
                      + E    L  +  E+ Y Q    L+
Sbjct: 84  -------SPDEINEIMARLTSL--EMRYNQLSVALN 110


>gi|295134892|ref|YP_003585568.1| ABC transporter ATP-binding protein [Zunongwangia profunda SM-A87]
 gi|294982907|gb|ADF53372.1| putative ABC transporter ATP-binding protein [Zunongwangia profunda
           SM-A87]
          Length = 563

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 9/97 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +   + +N     P ++++  + + LM ++  L + I           +    LE+A+
Sbjct: 103 AVLDEYNKINDMFGLPEVYEDADKMQKLMDKQAELQDKIDASNAW-----ELDTKLEIAM 157

Query: 78  EEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEAD 113
              D     E    +  +   E        LL  E D
Sbjct: 158 ---DALRTPEADKKISVLSGGERRRVALCRLLLKEPD 191


>gi|270011842|gb|EFA08290.1| hypothetical protein TcasGA2_TC005924 [Tribolium castaneum]
          Length = 2287

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 40   IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCS 83
              ++ +  E Q  ++ ++ + +++ +L   L  LE +LE                E D  
Sbjct: 1328 ENSQRVSEELQAAEDKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKSKRKVEGDLK 1387

Query: 84   ILQETSDNLQRIKLEVEY 101
            + QE   +L+R K E+E 
Sbjct: 1388 LTQEAVADLERNKKELEQ 1405


>gi|254166619|ref|ZP_04873473.1| hypothetical protein ABOONEI_1711 [Aciduliprofundum boonei T469]
 gi|289596331|ref|YP_003483027.1| RecA-superfamily ATPase implicated in signal transduction-like
           protein [Aciduliprofundum boonei T469]
 gi|197624229|gb|EDY36790.1| hypothetical protein ABOONEI_1711 [Aciduliprofundum boonei T469]
 gi|289534118|gb|ADD08465.1| RecA-superfamily ATPase implicated in signal transduction-like
           protein [Aciduliprofundum boonei T469]
          Length = 593

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLILLELALEE 79
           + L  L    +D ++     +   L +E +  +  +  +K EI+ +  +   L E+   +
Sbjct: 197 KELEELKEAIKDGNVKALTEKITELTKELEMKNKELEELKNEIKIKEDEMKKLQEMLKYK 256

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESL 107
           +D  I +E     +  K+E + KQ + +
Sbjct: 257 EDELIRREEDLLYREKKIEAQIKQLQMI 284


>gi|281424641|ref|ZP_06255554.1| ATP-dependent chaperone protein ClpB [Prevotella oris F0302]
 gi|299142336|ref|ZP_07035468.1| ATP-dependent chaperone protein ClpB [Prevotella oris C735]
 gi|281401229|gb|EFB32060.1| ATP-dependent chaperone protein ClpB [Prevotella oris F0302]
 gi|298576058|gb|EFI47932.1| ATP-dependent chaperone protein ClpB [Prevotella oris C735]
          Length = 827

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 38/116 (32%), Gaps = 22/116 (18%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLW-------QNVIEAKMLMRERQHLDNAISFIK----- 60
             + D+  + L  +    +   +         +  +   L +E   L   ++  +     
Sbjct: 400 RMERDSVPEELDEMERSLKQKEIERQAILREDDQQKIAQLEKEIAELKEKVNAFRARWQA 459

Query: 61  ---------EIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFES 106
                    +I+  + D  +  E A  E +   + E     L++++ +++  +   
Sbjct: 460 QKGEVDHIQQIKQHMEDLKLEAERAEREGNYQRVAEIRYGELKQLQDQMDTLRKRV 515


>gi|256016425|emb|CAP08962.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
          Length = 473

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 8/108 (7%)

Query: 39  VIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL-ELALEEDDCSILQETSDNLQRIK 96
               +   +E ++L  A+   K   Q  + D+  +  EL                L R +
Sbjct: 210 QQRFQERKKELKNLQKAVESFKRSAQSAVEDSDQIFTELIRS---IERRSLEVKELIRAQ 266

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            +    Q E LL           E+   +   E   +    +    R+
Sbjct: 267 EKARVSQAEGLLEQ---LKQEIAELRKRSTELEQLSYTEDHIHFLQRY 311


>gi|189467488|ref|ZP_03016273.1| hypothetical protein BACINT_03877 [Bacteroides intestinalis DSM
           17393]
 gi|189435752|gb|EDV04737.1| hypothetical protein BACINT_03877 [Bacteroides intestinalis DSM
           17393]
          Length = 862

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA--------------ISFIKE 61
            D   +++  L  + E      +  + + + +E   L                 ++ I++
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDKPKLEQIGKELAELKEQEKSHKAKWQSEKTLVNKIQQ 469

Query: 62  IQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFES--------LLSGEA 112
            +  + +     + A  E D   + E     LQ +  E+E  Q E         ++  E 
Sbjct: 470 NKVEIENLKFEADKAEREGDYGKVAEIRYGKLQALNKEIEDTQKELHMMQGDKAMIKEEV 529

Query: 113 DSNDA 117
           D+ D 
Sbjct: 530 DAEDI 534


>gi|167390970|ref|XP_001739583.1| DNA mismatch repair protein mutS [Entamoeba dispar SAW760]
 gi|165896692|gb|EDR24035.1| DNA mismatch repair protein mutS, putative [Entamoeba dispar
           SAW760]
          Length = 380

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 54/122 (44%), Gaps = 18/122 (14%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMR--ERQHLDNAISF 58
           K++++L  + G   ++N+  RL   N +    P L       + L++   +  L++ +  
Sbjct: 60  KINKRLELVEGF--YENSEIRLKIKNEELAIMPDL-------EKLIKGINKSDLESIVKL 110

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSND 116
            + ++     +  + E   E ++  I +E  + L+RI  E+E  +    +L+  E   N 
Sbjct: 111 YEAVRI----SKSIKEELKEMNNKEIEKEIIEALERISEEMEKFEEMVVTLIDIEETKNH 166

Query: 117 AY 118
            +
Sbjct: 167 VF 168


>gi|332852377|ref|XP_003316101.1| PREDICTED: c-type lectin domain family 4 member M-like isoform 5
           [Pan troglodytes]
          Length = 343

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-- 59
           +L++    +G L +     +    L              + + + +E   L  A+  +  
Sbjct: 105 ELTQLKAAVGELPEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTQLKAAVGELPE 164

Query: 60  -KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
             ++Q+   +   L     E  + S LQE    L ++K  VE  
Sbjct: 165 KSKLQETYQELTQLKAAVGELPEKSKLQEIYQELTQLKAAVERL 208


>gi|1175508|sp|P45388|YAEJ_PSEPU RecName: Full=Uncharacterized 15.2 kDa protein in pcaJ 3'region
          Length = 137

 Score = 36.5 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 31/121 (25%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-THIP-------------------- 256
           S  + + +++  +   RA GAGGQ+VN   SAV +   IP                    
Sbjct: 5   SNNVHLPDAEIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASSLPEFYKERLLALRDSRI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           TG   ++++ QQ R+Q +N+A A     A+L EL +   +       +  T    G + R
Sbjct: 65  TGDGVLIIKAQQYRTQDQNRADAL----ARLAELIIAAGKTEKKRRPTKPTL---GSKTR 117

Query: 314 S 314
            
Sbjct: 118 R 118


>gi|239815495|ref|YP_002944405.1| ATP-dependent protease La [Variovorax paradoxus S110]
 gi|239802072|gb|ACS19139.1| ATP-dependent protease La [Variovorax paradoxus S110]
          Length = 813

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 5/124 (4%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMR---ERQHLDNAI-SFIK 60
           +L+    + D D+   RL  L  + E    +     + +  ++   E+   D  +   +K
Sbjct: 181 KLDNKQAVLDLDDVKSRLENLFGQLEREVDILNVDKKIRGRVKRQMEKNQRDFYLNEQVK 240

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            IQ  L +     ++   E    + +   + L++ + E++  +  S +S EA     Y++
Sbjct: 241 AIQKELGEGEEGADIEEIEKKIKLAKMPKEALKKAEGELKKLKLMSPMSAEATVVRNYID 300

Query: 121 VHAG 124
           V  G
Sbjct: 301 VLVG 304


>gi|117921830|ref|YP_871022.1| ABC transporter-like protein [Shewanella sp. ANA-3]
 gi|117614162|gb|ABK49616.1| ABC transporter related [Shewanella sp. ANA-3]
          Length = 637

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISF----IKEIQDRLCD 68
           D     +RL+ L     D  L+   N  +   ++ ER  L   +        E+Q+ +  
Sbjct: 570 DQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDA 629

Query: 69  NLILLELA 76
               LEL 
Sbjct: 630 ME--LELM 635


>gi|322831040|ref|YP_004211067.1| ABC transporter [Rahnella sp. Y9602]
 gi|321166241|gb|ADW71940.1| ABC transporter related protein [Rahnella sp. Y9602]
          Length = 638

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA------KMLMRERQHLDNAI 56
           L +Q+  L      +     L+ +  +  D  ++ N  +A      +   + +  L+   
Sbjct: 561 LRKQITKLEAQM--EKLSTELATIEERLADSAIYDNSRKADLTECLQQQTKVKGALEETE 618

Query: 57  SFIKEIQDRLCDNLILLEL 75
               + Q++L D     +L
Sbjct: 619 MTWLDAQEQLEDMSKAFDL 637


>gi|302143251|emb|CBI20546.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 5/72 (6%)

Query: 6   QLNCLGGLFDWDNAVQR-LSFLNT-KTEDPHLWQNVIEAKMLM-RERQHLDNAISFIKEI 62
           +L  L    D     ++ L  LN    ++  +W+   + K +  RER+ L      I+E+
Sbjct: 384 KLQKLQAKLDKCVKEKKFLDDLNENLLQNQEIWE--AKMKEIEERERKVLKLKDDKIQEL 441

Query: 63  QDRLCDNLILLE 74
           +++L D ++L+E
Sbjct: 442 EEQLGDLMMLIE 453


>gi|257057209|ref|YP_003135041.1| ATPase component of ABC transporters with duplicated ATPase
           domain-containing protein [Saccharomonospora viridis DSM
           43017]
 gi|256587081|gb|ACU98214.1| ATPase component of ABC transporters with duplicated ATPase domain
           protein [Saccharomonospora viridis DSM 43017]
          Length = 600

 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
            E +   +E   L+  +  + E + RL       +LA    D   L E +  L+ +  E 
Sbjct: 531 AEWRAATKELAKLERKLDAVHERESRLH-----RQLAEAATDPDRLMELNGELKAVLAEK 585

Query: 100 EYKQFESL 107
           +  +   L
Sbjct: 586 DELERRWL 593


>gi|295109439|emb|CBL23392.1| ATP-dependent chaperone ClpB [Ruminococcus obeum A2-162]
          Length = 860

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 20  VQRLSFLNTKTED--PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
            +RL+ L  +  +       N  +A+    +       +  ++++++++ D    ++ A 
Sbjct: 437 KERLAELQKELAEMRDTF--NTQKAQWDNEKHS-----VEKLQKLREQIEDINKQIQKAK 489

Query: 78  EEDDCSILQETS-DNLQRIKLEVEYKQFES 106
           +  D     E     L +++ ++E ++ + 
Sbjct: 490 QNYDLEKAAELQYGELPKLQQQLEIEEKQV 519


>gi|86134801|ref|ZP_01053383.1| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|85821664|gb|EAQ42811.1| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 1122

 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ ++           N +  LS      E      N+ + + + ++   +   +  +K
Sbjct: 639 LEMVKRFYVEQKTMQIANKIDELSKEQESLEKNE--NNLEKQQEVSKKFDDIQKDLEELK 696

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           +  ++L   + L E+  EE      ++  + L++ +  +E KQ
Sbjct: 697 KDNEKLKKPMDLPEVENEE------KQIDEELKKAEDLIESKQ 733


>gi|307196243|gb|EFN77889.1| Dynein heavy chain 2, axonemal [Harpegnathos saltator]
          Length = 4429

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 7    LNCLGGLFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEI 62
            +N L   FD D+   R L  +   T DP    +  +  ++    + L   +       ++
Sbjct: 3123 INTLRD-FDKDHISDRVLRTIAKYTSDPEF--DPAKVGLVSVAAKSLCMWVIAMEKYGKL 3179

Query: 63   QDRLCDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQ 103
               +      L+ ALE      + L+E    L+ +  E+E  Q
Sbjct: 3180 YRIVAPKREKLQAALESLRQKEAALEEAMQQLKNLHEELERLQ 3222


>gi|158293298|ref|XP_001688585.1| AGAP008556-PA [Anopheles gambiae str. PEST]
 gi|157016638|gb|EDO64002.1| AGAP008556-PA [Anopheles gambiae str. PEST]
          Length = 809

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 19/100 (19%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +++ L  + D     + +S L  +T            +   R+ + L  A++ I  +
Sbjct: 438 MNDEVDSLRCVLDL--KQREISELRKQT------------QEYERDAKDLPGALTKISAL 483

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + R+ D  + L+   EE+     +E    L+ ++  +  +
Sbjct: 484 ESRIEDLEVQLKTKTEEE-----KELQQKLKHLQDNLNQE 518


>gi|15894246|ref|NP_347595.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
 gi|54035886|sp|Q97KG0|CLPB_CLOAB RecName: Full=Chaperone protein ClpB
 gi|15023863|gb|AAK78935.1|AE007611_3 ATPase with chaperone activity, two ATP-binding domains
           [Clostridium acetobutylicum ATCC 824]
 gi|325508374|gb|ADZ20010.1| ATPase with chaperone activity, two ATP-binding domains
           [Clostridium acetobutylicum EA 2018]
          Length = 865

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 15/79 (18%)

Query: 40  IEAKMLMRERQHLDNA--------------ISFIKEIQDRLCDNLILLELALEEDDCSIL 85
              + + +E   L +               I  IKE++ +L +    +E A  E D +  
Sbjct: 443 ERLESIQKELSDLKDKDKAMTAKYDKEKAQIQGIKELKTKLDEIRGQIEKAEREYDLNKA 502

Query: 86  QETS-DNLQRIKLEVEYKQ 103
            E     + +++ E+E K+
Sbjct: 503 AELKYGEVPKLEHEIEEKE 521


>gi|83941869|ref|ZP_00954331.1| peptidyl-tRNA hydrolase domain protein [Sulfitobacter sp. EE-36]
 gi|83847689|gb|EAP85564.1| peptidyl-tRNA hydrolase domain protein [Sulfitobacter sp. EE-36]
          Length = 140

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 33/140 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-------IPT------------- 257
           + EI I + +      RASG GGQ+VN   SAV +         IPT             
Sbjct: 5   TDEIAIQDWELTESFMRASGPGGQNVNKVSSAVELRFEAATSPSIPTPVKNRLRRLAGRR 64

Query: 258 -----GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
                 +V+QC + RSQ +N+     ++R +L EL     +       +  T    G + 
Sbjct: 65  WTTEGALVLQCDETRSQVRNRE----IIRERLKELITAALKPPKKRIPTRPTL---GSKK 117

Query: 313 RSYVLQPYQ-MVKDLRTNIE 331
           R    +  +  VK LR  ++
Sbjct: 118 RRLKAKKTRGEVKALRGRVD 137


>gi|150388645|ref|YP_001318694.1| ABC transporter related [Alkaliphilus metalliredigens QYMF]
 gi|149948507|gb|ABR47035.1| ABC transporter related [Alkaliphilus metalliredigens QYMF]
          Length = 640

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKE 61
           D     +RL+ L +      ++ +  +++ + +E    +Q L+      + 
Sbjct: 586 DILELEERLNALESLMCQEDIYTDPQKSREVHQETLTTKQSLEKLYEEWEN 636


>gi|326935493|ref|XP_003213804.1| PREDICTED: TBC1 domain family member 25-like, partial [Meleagris
           gallopavo]
          Length = 701

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 18  NAVQRLSFLNTKTEDPHLWQN--VIEAKMLMRERQHLDNAISFIK----EIQDRLCDNLI 71
              ++   L+ + ++     +    + +   +E++ L   +   +    + + RL     
Sbjct: 59  GLREQSEELSRELQEVQSRHDALQAQLQERSQEQEELRQRLEAAESTQGDTEQRLRQAQE 118

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           LLEL  +E   +          R +LE    +  +LL  
Sbjct: 119 LLELQAQEHMAATR--AHREQHRAELEGRVGELRALLGD 155


>gi|145520453|ref|XP_001446082.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413559|emb|CAK78685.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1367

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 16/100 (16%)

Query: 18  NAVQRLSFLNTKT--------EDPHL---WQNVIEAKMLMRERQHLDN---AISFIKEIQ 63
              +++S LN++         E P      +   + + L +ERQ+++         K++ 
Sbjct: 396 QLEEKISALNSQMLVGGQKIEETPQFQNALEKQQKLQELEKERQNIEEDKAQTDKYKQLL 455

Query: 64  DRLCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEY 101
            +  D +I L   L E D +I  LQE  D   +++ E+E 
Sbjct: 456 LKQRDIMIALTNRLNERDETILQLQEELDAYDKLQKELED 495


>gi|91209262|ref|YP_539248.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
           UTI89]
 gi|117622476|ref|YP_851389.1| hypothetical protein APECO1_1796 [Escherichia coli APEC O1]
 gi|218557133|ref|YP_002390046.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli S88]
 gi|237704351|ref|ZP_04534832.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331661263|ref|ZP_08362195.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
 gi|91070836|gb|ABE05717.1| hypothetical protein YaeJ [Escherichia coli UTI89]
 gi|115511600|gb|ABI99674.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218363902|emb|CAR01567.1| conserved hypothetical protein [Escherichia coli S88]
 gi|226902263|gb|EEH88522.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294490304|gb|ADE89060.1| putative peptidyl-tRNA hydrolase [Escherichia coli IHE3034]
 gi|307629768|gb|ADN74072.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli UM146]
 gi|315285276|gb|EFU44721.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 110-3]
 gi|323950809|gb|EGB46686.1| RF-1 domain-containing protein [Escherichia coli H252]
 gi|323955074|gb|EGB50850.1| RF-1 domain-containing protein [Escherichia coli H263]
 gi|324008223|gb|EGB77442.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 57-2]
 gi|331052305|gb|EGI24344.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
          Length = 140

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 24/101 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIP 256
           S  + I + +  I   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +    +V++ Q+ R+Q  N+  A   L A + +L  +++  
Sbjct: 65  SSDGVIVIKAQEYRNQELNREAALARLVAVIKDLTTEQKAR 105


>gi|6984066|gb|AAF34747.1| l(2)01289 H9 form [Drosophila melanogaster]
 gi|6984070|gb|AAF34749.1| l(2)01289 H9 form [Drosophila melanogaster]
          Length = 857

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 17/86 (19%)

Query: 11  GGLFDWDNAVQ------RLSFLNTKT-----EDPHLWQ------NVIEAKMLMRERQHLD 53
            G+ D+  +++      R+  +N K      ED           +  +++ ++ E +++D
Sbjct: 139 EGVLDFLTSLEAMDLPDRIEEVNAKILQKIIEDTDFVAVLFYDKDQKKSQKILAELENID 198

Query: 54  NAISFIKEIQDRLCDNLILLELALEE 79
           +          ++ D+    E  ++E
Sbjct: 199 DECDQNDIAFVKIDDDKEAKEWGIDE 224


>gi|24586060|ref|NP_652026.2| lethal (2) 01289, isoform A [Drosophila melanogaster]
 gi|23240200|gb|AAM70821.2| lethal (2) 01289, isoform A [Drosophila melanogaster]
          Length = 857

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 17/86 (19%)

Query: 11  GGLFDWDNAVQ------RLSFLNTKT-----EDPHLWQ------NVIEAKMLMRERQHLD 53
            G+ D+  +++      R+  +N K      ED           +  +++ ++ E +++D
Sbjct: 139 EGVLDFLTSLEAMDLPDRIEEVNAKILQKIIEDTDFVAVLFYDKDQKKSQKILAELENID 198

Query: 54  NAISFIKEIQDRLCDNLILLELALEE 79
           +          ++ D+    E  ++E
Sbjct: 199 DECDQNDIAFVKIDDDKEAKEWGIDE 224


>gi|260063087|ref|YP_003196167.1| endopeptidase Clp ATP-binding chain B [Robiginitalea biformata
           HTCC2501]
 gi|88784656|gb|EAR15826.1| endopeptidase Clp ATP-binding chain B [Robiginitalea biformata
           HTCC2501]
          Length = 866

 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 22/130 (16%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD--------------NAISFIKE 61
            D   +++  L  + E      +  + K L  E  +                  +  I++
Sbjct: 410 LDALDRKIMQLEIEIEAIKRENDPDKLKALNAELANFKEERNEIFAKWESEREVVDGIQK 469

Query: 62  IQDRLCDNLILLELALEEDDCSILQE--------TSDNLQRIKLEVEYKQFESLLSGEAD 113
            +  + +  +  E A    D   + E            L++++ E+  +Q    L  E  
Sbjct: 470 TKQSIEEYKLEAERAERNGDYGRVAELRYGKIKDAQAQLEKLQEELASQQEAGTLIKEEV 529

Query: 114 SNDAYLEVHA 123
           + +   EV A
Sbjct: 530 TREDIAEVVA 539


>gi|321472038|gb|EFX83009.1| hypothetical protein DAPPUDRAFT_100958 [Daphnia pulex]
          Length = 534

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTK--TEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           +KL ++L  +    D  +   R+  L  +  T D    Q++I  + L  E   + + +  
Sbjct: 43  LKLQQRLKTVEK--DKASLATRVEELERESPTADVRRAQDMIRLQELEMENAKIKDDLKN 100

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
           ++  +    +N + L  +L+    S     SD L R + E E      LL
Sbjct: 101 LR--RQAATENEVQLPRSLDMLM-SQFDAMSDELDRRREECEPCWLTRLL 147


>gi|300175197|emb|CBK20508.2| unnamed protein product [Blastocystis hominis]
          Length = 880

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 10/103 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + +  RL  L              + K  M E + L N ++   E Q+++     + + A
Sbjct: 435 EASKARLEKLKPLMMR------HEKEKEGMDELRRLKNKVA---ETQNKIEAAKRVHDTA 485

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
              D    +L +  + ++R + E+E ++   +L  E  +ND  
Sbjct: 486 RASDLQYYVLPDLEEAIKRQEEEIEKQKDSRMLKEEVTANDIC 528


>gi|326667857|ref|XP_694648.4| PREDICTED: si:dkey-252h13.1 [Danio rerio]
          Length = 1274

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 14/107 (13%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIK 60
             +L  L  +   D    R++ L  + ++      +  A +    R  LD     +  I 
Sbjct: 666 EERLRILARV---DELKTRVTDLEQQIQESRQEAEMERALLQGERRAELDQVEAELEIIN 722

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           ++Q +L +     +   E+          + L+      E  +F  L
Sbjct: 723 QLQLKLNEVENATQREKEKK--------VEALESATKRFEDLEFRQL 761


>gi|319400709|gb|EFV88931.1| ABC transporter family protein [Staphylococcus epidermidis FRI909]
          Length = 644

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +     +S +  +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELESAISHIEEQLTQPEVFNDPLKASKFANQKSETEQKLEQIMLEWEKLQEKL 644


>gi|300781544|ref|ZP_07091398.1| peptidyl-tRNA hydrolase domain protein [Corynebacterium genitalium
           ATCC 33030]
 gi|300533251|gb|EFK54312.1| peptidyl-tRNA hydrolase domain protein [Corynebacterium genitalium
           ATCC 33030]
          Length = 147

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 24/90 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT----------------------HIPTG 258
           + I+ +D      ++SG GGQ VNTTDS V+++                      H   G
Sbjct: 16  VVIAAADLTERFSKSSGPGGQGVNTTDSKVQLSLDVAACTSLSDAQRRRILRNLEHRLDG 75

Query: 259 VV--VQCQQERSQHKNKAQAWNMLRAKLYE 286
            V  V    +RSQ +N+A+A   + A L E
Sbjct: 76  TVLTVAASTQRSQARNRAEARERMAALLRE 105


>gi|237756597|ref|ZP_04585115.1| chaperone protein ClpB [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691243|gb|EEP60333.1| chaperone protein ClpB [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 994

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 13/102 (12%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-----------EIQDRL 66
              +++  L+ +     L  +  +   L  E+ +L+  +  +K           E+Q +L
Sbjct: 551 ELERKIKMLDEQIIQASLDGDYEKEAKLKIEKANLEKQLKDLKAKSSNERTKLEELQRQL 610

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
            +    +E   ++ D    +E    +++ ++E E K  +  L
Sbjct: 611 EEIEKQIEFYSQKGDYE--KEAEYKIKKAQIEKEIKALQQKL 650


>gi|209878197|ref|XP_002140540.1| hypothetical protein [Cryptosporidium muris RN66]
 gi|209556146|gb|EEA06191.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
          Length = 673

 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 24  SFLNTKTEDPHLWQNVIE-AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
             + T  E P    + ++  K  +R+ + ++     I+ ++  L +    +EL LEE D 
Sbjct: 441 EDITTLIEPPDEIDDRLQGMKEEVRQVRSIEEKNKEIELLKKELEEQRA-IELELEE-DT 498

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
              +   D  Q +   +E K  + LL+ +   N+
Sbjct: 499 EKDENIRDKEQNLTNILENKPTDLLLNSKVQDNN 532


>gi|158521730|ref|YP_001529600.1| chromosome segregation protein SMC [Desulfococcus oleovorans Hxd3]
 gi|158510556|gb|ABW67523.1| chromosome segregation protein SMC [Desulfococcus oleovorans Hxd3]
          Length = 1204

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 20/234 (8%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + L G+       Q +  L +   D     +  +     +E+  L+  +  I+E   ++ 
Sbjct: 672 DQLSGIL---AKKQEIKDLESAMADMDRQIDQAK-----KEQAALEAVVREIEEDLQKIK 723

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDAYLEVHAGAG 126
           ++         E + S+ +  S+ L+     +E  + E   L GE    D   E+ A + 
Sbjct: 724 NDRNQARAGHLELEKSLYR-VSEELKHADHRLEILEVEQQQLEGEESEMDD--EIVAYSR 780

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQ 185
               QD    +     R A       E   + +  E     S  L +K   ++  L+   
Sbjct: 781 SL--QDARQAITDTEERIA---GLNHELATVSETYESLSQASMELRLKYTASHAELENTA 835

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRASG 237
                ++    +  +R       I V      +I  +IE  E+  R       G
Sbjct: 836 KTLDRLKRFQTEGAARLEQITIDIRVKREKATAICNDIEKQEALLREHYVVLKG 889


>gi|115441387|ref|NP_001044973.1| Os01g0877300 [Oryza sativa Japonica Group]
 gi|56784734|dbj|BAD81883.1| putative mitotic checkpoint protein [Oryza sativa Japonica Group]
 gi|113534504|dbj|BAF06887.1| Os01g0877300 [Oryza sativa Japonica Group]
 gi|215706925|dbj|BAG93385.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 720

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 14/114 (12%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTED---------PHLWQNVIEAKMLMRERQHLD 53
           L+ QL  L    D   +V+  + +  +  +         P    +    K+L  E ++ +
Sbjct: 237 LNEQLEDLKKQLD--ESVRENNEMEHRLLNCSSLSYERTPS--DDQKLIKLLQEELRNYE 292

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDD-CSILQETSDNLQRIKLEVEYKQFES 106
             +   + ++    +  +L E  LEE       +     LQ I+ + +  + E 
Sbjct: 293 KEVDEARRLKSSHTNVELLKEKILEEQGCRERAEMELSKLQEIEAKAQKLELEL 346


>gi|46580388|ref|YP_011196.1| ABC transporter ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449805|gb|AAS96455.1| ABC transporter, ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233637|gb|ADP86491.1| ABC transporter related protein [Desulfovibrio vulgaris RCH1]
          Length = 641

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 6/60 (10%), Positives = 18/60 (30%), Gaps = 5/60 (8%)

Query: 16  WDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMRERQHLDNA----ISFIKEIQDRLCDNL 70
            +      + L  +  DP     ++            L+      +   +E++ R+ +  
Sbjct: 578 LEALETEQAVLERRLADPASFGSDMSALTETGERLASLEEQQLTLLERWEELEARIAELE 637


>gi|332185548|ref|ZP_08387296.1| ABC transporter family protein [Sphingomonas sp. S17]
 gi|332014526|gb|EGI56583.1| ABC transporter family protein [Sphingomonas sp. S17]
          Length = 595

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 11/68 (16%)

Query: 15  DWDNAVQRLSFL-------NTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           D++   +R+  L         K  DP L+  +  +   LM+    ++ A     E + R 
Sbjct: 527 DYELLPKRIEELEAAIARDEAKLADPDLYAKDPAQFDRLMK---AIEKAREEKDEAEMRW 583

Query: 67  CDNLILLE 74
            +    +E
Sbjct: 584 LELAEQVE 591


>gi|331270393|ref|YP_004396885.1| ABC transporter-like protein [Clostridium botulinum BKT015925]
 gi|329126943|gb|AEB76888.1| ABC transporter related protein [Clostridium botulinum BKT015925]
          Length = 637

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 6/52 (11%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEI 62
           D  +  + +  L  K     ++ +  +++ + +E       L+   +  +E+
Sbjct: 585 DIASLEKDIEELQQKLCLEEIYSDPNKSEEVNKELLTKENELELLYTSWEEL 636


>gi|319901560|ref|YP_004161288.1| ATP-dependent chaperone ClpB [Bacteroides helcogenes P 36-108]
 gi|319416591|gb|ADV43702.1| ATP-dependent chaperone ClpB [Bacteroides helcogenes P 36-108]
          Length = 864

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 11/136 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-------IQDRLCD 68
            D   +++  L  + E      + ++ + + +E   L    +  K        + +++  
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDKLKLEQIGKELAELKEQENSYKAKWQSEKTLVNKIQQ 469

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N I +E    E D +  +     +     E+ Y + ++L     D+     E+       
Sbjct: 470 NKIEIENLKFEADKAEREGDYGKVA----EIRYGKLQALNKEIEDTQQKLHEMQGDKAMI 525

Query: 129 ESQDWANMLLRMYTRW 144
           + +  A  +  + +RW
Sbjct: 526 KEEVDAEDIADVVSRW 541


>gi|313607680|gb|EFR83937.1| ABC transporter [Listeria monocytogenes FSL F2-208]
          Length = 303

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 4/56 (7%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + +  +FD        L  +  +  +P L+ +  + + LM +   L       KEI
Sbjct: 85  DEMLSVFDSLRKMEADLRKMELRLGEPELYNDPEKYQALMTDYDTLQ---HTFKEI 137


>gi|257053797|ref|YP_003131630.1| chromosome segregation protein SMC [Halorhabdus utahensis DSM
           12940]
 gi|256692560|gb|ACV12897.1| chromosome segregation protein SMC [Halorhabdus utahensis DSM
           12940]
          Length = 1188

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 19/110 (17%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D     + ++ L    ED                ++ LD     +  ++D L +    +E
Sbjct: 260 DLAAVREEIAELEETLED---------------RQRELDEREGKVVRLEDELAELNAEIE 304

Query: 75  LALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              E++  ++ +E  +    + R++  +E  + E     EA   +A++E+
Sbjct: 305 RKGEDEQLALKREIEEIKGEIARLEDAIESAE-EKRDEAEARRREAFVEI 353


>gi|164423145|ref|XP_958567.2| hypothetical protein NCU09063 [Neurospora crassa OR74A]
 gi|157069967|gb|EAA29331.2| hypothetical protein NCU09063 [Neurospora crassa OR74A]
          Length = 1650

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 46/112 (41%), Gaps = 7/112 (6%)

Query: 2    KLSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
            +L  +L  +  +    +  +Q+++ L  ++ + +L       K L +E+Q      + + 
Sbjct: 1017 ELESRLRQIQSMIPQLETKMQKIN-LEVESSERNLADAQRRIKELSKEQQPSKTDDNRVA 1075

Query: 61   EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
             ++  +      +E   EE     +    D ++ ++ ++     E L S +A
Sbjct: 1076 ALEKEIAKLEGEVEKLREE-----MSSVEDEIKALQDKIMKVGGEKLRSQKA 1122


>gi|153810225|ref|ZP_01962893.1| hypothetical protein RUMOBE_00606 [Ruminococcus obeum ATCC 29174]
 gi|153855521|ref|ZP_01996640.1| hypothetical protein DORLON_02656 [Dorea longicatena DSM 13814]
 gi|160914372|ref|ZP_02076587.1| hypothetical protein EUBDOL_00376 [Eubacterium dolichum DSM 3991]
 gi|160934990|ref|ZP_02082376.1| hypothetical protein CLOLEP_03866 [Clostridium leptum DSM 753]
 gi|167751518|ref|ZP_02423645.1| hypothetical protein EUBSIR_02519 [Eubacterium siraeum DSM 15702]
 gi|260589824|ref|ZP_05855737.1| TnpX site-specific recombinase [Blautia hansenii DSM 20583]
 gi|325263038|ref|ZP_08129773.1| site-specific recombinase, resolvase family [Clostridium sp. D5]
 gi|149752043|gb|EDM61974.1| hypothetical protein DORLON_02656 [Dorea longicatena DSM 13814]
 gi|149833404|gb|EDM88485.1| hypothetical protein RUMOBE_00606 [Ruminococcus obeum ATCC 29174]
 gi|156866443|gb|EDO59815.1| hypothetical protein CLOLEP_03866 [Clostridium leptum DSM 753]
 gi|158433530|gb|EDP11819.1| hypothetical protein EUBDOL_00376 [Eubacterium dolichum DSM 3991]
 gi|167655326|gb|EDR99455.1| hypothetical protein EUBSIR_02519 [Eubacterium siraeum DSM 15702]
 gi|260539827|gb|EEX20396.1| TnpX site-specific recombinase [Blautia hansenii DSM 20583]
 gi|291540155|emb|CBL13266.1| Site-specific recombinases, DNA invertase Pin homologs [Roseburia
           intestinalis XB6B4]
 gi|324031431|gb|EGB92711.1| site-specific recombinase, resolvase family [Clostridium sp. D5]
          Length = 618

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NC   +   D    R   +  +  +     +   AK L +ER+ L+  ++ +  +   L
Sbjct: 389 INCFADMAVNDEKAVR--AIEKRLTE----TDQSRAKALEKERKKLNKRLAELDRLFSSL 442

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
            ++ ++ E   E +     +  S   Q+ +LE+E +  E 
Sbjct: 443 YEDKVM-ERITERN----FEMMSGKYQKEQLEIEARLKEV 477


>gi|313231678|emb|CBY08791.1| unnamed protein product [Oikopleura dioica]
          Length = 2242

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 98/295 (33%), Gaps = 57/295 (19%)

Query: 16  WDNAVQRLSFLNTKT-------EDPHLWQNVIEAKMLMRERQHLDNAISFIK----EIQD 64
                 RL+ LN +         D         A+ +++    ++N  S ++    E + 
Sbjct: 103 IQELQSRLNELNEEIKKKEENCSD-------KSAEKIIKLEDSIENLYSLLEFENGEYER 155

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L +   +     E +   + +   D ++ +  E    +    LS E D       +H  
Sbjct: 156 ELEEYTEI-----ETNFRDLEEAVKDRVEELSSEFNASEKSRQLS-EYDE-----IIHRN 204

Query: 125 AGG-TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
             G  E  D      +   R  E  + + +  E    E   I  A++         +L  
Sbjct: 205 QNGLLERLDKIRESRKSQKREIENARKERKLAEAARSEFDIIPEASV--------DYLND 256

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
              + RL  +   + +SR             +DD IEIE + +   +D +       Q++
Sbjct: 257 SHAMQRLQIVLATEVSSREK------LEKVFLDDRIEIEENINKMLVDAHEQESKHKQNL 310

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +  +  V              +ER QH++++   +  +    +L+    E+    
Sbjct: 311 HKLEQLV-------------AKERQQHESESIERSWQQENFQKLKNDYLEKKKEK 352


>gi|254460840|ref|ZP_05074256.1| class I peptide chain release factor [Rhodobacterales bacterium
           HTCC2083]
 gi|206677429|gb|EDZ41916.1| class I peptide chain release factor [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 155

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 25/112 (22%)

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP------TG----- 258
            V  ++  +  +EI++ +      RASG GGQ+VN   +AV +          TG     
Sbjct: 12  HVGHMLQITPTLEIADWELTETFTRASGPGGQNVNKVSTAVELRFEAERSPSLTGPVKSR 71

Query: 259 --------------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
                         +V++ ++ERSQ +N+A A   L   + +  +  +  IA
Sbjct: 72  LKRLAGRRWTLDGALVIRAEEERSQARNRAIARERLAELIRKALVAPKRRIA 123


>gi|154506128|ref|ZP_02042866.1| hypothetical protein RUMGNA_03670 [Ruminococcus gnavus ATCC 29149]
 gi|153793627|gb|EDN76047.1| hypothetical protein RUMGNA_03670 [Ruminococcus gnavus ATCC 29149]
          Length = 618

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NC   +   D    R   +  +  +     +   AK L +ER+ L+  ++ +  +   L
Sbjct: 389 INCFADMAVNDEKAVR--AIEKRLTE----TDQSRAKALEKERKKLNKRLAELDRLFSSL 442

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
            ++ ++ E   E +     +  S   Q+ +LE+E +  E 
Sbjct: 443 YEDKVM-ERITERN----FEMMSGKYQKEQLEIEARLKEV 477


>gi|26342506|dbj|BAC34915.1| unnamed protein product [Mus musculus]
          Length = 470

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +DR+
Sbjct: 123 LDTENKRLR-AELQAL---------QKTYQKILREKEGALEAKYQAMERAVTFEHDRDRV 172

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 173 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 229

Query: 127 GTESQDWAN 135
           GT+ + WA+
Sbjct: 230 GTQCEYWAS 238


>gi|302846618|ref|XP_002954845.1| hypothetical protein VOLCADRAFT_118871 [Volvox carteri f.
            nagariensis]
 gi|300259820|gb|EFJ44044.1| hypothetical protein VOLCADRAFT_118871 [Volvox carteri f.
            nagariensis]
          Length = 1851

 Score = 36.1 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 98/272 (36%), Gaps = 28/272 (10%)

Query: 41   EAKMLMRERQ-HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
             A++++  R   L N     +E++DRL       E  + E + ++ +E    + R++ EV
Sbjct: 837  AAQLIVSVRAVDLQNLKESQRELKDRLAKAATEAEYKMYEREQAVRREFEGEVSRLRHEV 896

Query: 100  EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
            E  + +            Y    A      ++D+   L      +  ++K   E      
Sbjct: 897  EVLRADL----------EYTRTTANDEAAMTRDFERALREQQDMF--EKKLAAEISRTDA 944

Query: 160  GE-EAGIKSATL------LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             E E     A        L +   A      E+       I     ++++  + + I   
Sbjct: 945  AEREMQRLRAKFGRKLWQLDEQQGAIVREATERQSELEQIIEATKQDAQKAIAAAHIQTE 1004

Query: 213  PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT---GVVVQCQQERSQ 269
              +   I+ E++E + +     A  A  Q     ++ +++    T   G+  +  QE  +
Sbjct: 1005 QELR--IDGELNEEELQR---AADAAQKQLEEKDEAYLKLLAKHTLQSGLNAKTTQENER 1059

Query: 270  HKNKAQAWNMLRAKLYELELQKREEIANIGES 301
             + +A+A      +L E  +   EE+  +  +
Sbjct: 1060 LRVEAEALRKENTRLAEQVMALTEELEAMQNA 1091


>gi|161525256|ref|YP_001580268.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|160342685|gb|ABX15771.1| Class I peptide chain release factor [Burkholderia multivorans ATCC
           17616]
          Length = 133

 Score = 36.1 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 24/116 (20%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PTGV 259
           +  +D      RA GAGGQ+VN   SA+ +                            GV
Sbjct: 6   LDPADVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPPVLKERLLALSDQRITRDGV 65

Query: 260 VV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           VV + Q+ R+Q KN+  A   L A +  +    R  IA     +  E     + R 
Sbjct: 66  VVIKSQEYRTQDKNREAALARLDALIRSVAFTPRARIATRPTRASKERRLEHKARR 121


>gi|126730017|ref|ZP_01745829.1| hypothetical protein SSE37_16603 [Sagittula stellata E-37]
 gi|126709397|gb|EBA08451.1| hypothetical protein SSE37_16603 [Sagittula stellata E-37]
          Length = 144

 Score = 36.1 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 25/103 (24%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------------------------T 253
           + +I I + +      R+SG GGQ+VN   +AV +                         
Sbjct: 9   TEQITIEDWELTEQFIRSSGPGGQNVNKVSTAVELRFEADRSPNLPGPVKARLRRIAGRR 68

Query: 254 HIPTGVVV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
               G VV Q  + RSQ +N+  A + L   + E   + +  I
Sbjct: 69  WTKEGAVVLQVDETRSQARNREIARDRLSELILEATRKPKRRI 111


>gi|123472663|ref|XP_001319524.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121902309|gb|EAY07301.1| hypothetical protein TVAG_223640 [Trichomonas vaginalis G3]
          Length = 1506

 Score = 36.1 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 3    LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKML--MRERQHLDNAISFIK 60
            L+ ++N L  + D  N  + L+    + + P +       K L   +++  ++     +K
Sbjct: 1342 LAIKVNDLRFILD--NKNKELAEGQNR-KKPDV---PKLWKQLEQNKKQNSIEQ--DKLK 1393

Query: 61   EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
            +I   + +   L+E   +  D   +Q  ++ +++ K ++
Sbjct: 1394 QISQEIENIDKLIEDKKDSIDEEEIQNITEEIEQYKQQI 1432


>gi|182683090|ref|YP_001834837.1| pneumococcal surface protein A [Streptococcus pneumoniae CGSP14]
 gi|182628424|gb|ACB89372.1| pneumococcal surface protein A [Streptococcus pneumoniae CGSP14]
          Length = 609

 Score = 36.1 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 50/128 (39%), Gaps = 17/128 (13%)

Query: 10  LGGLFDW--DNAVQRLSFLNTKTEDPHLWQNVIEA-------------KMLMRERQHLDN 54
           L     +  +   ++++    +  +    ++  +A             + L + RQ  + 
Sbjct: 102 LREYLKYIQEKNKEKIAKAEKEMNEAKQEEDKEKANLNKVLAKVIPSDRELEKTRQEAEK 161

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG--EA 112
           A   I E++ ++ +    ++ A ++ D    +E +   +  +LE +  + E  L    E+
Sbjct: 162 AKKNIPELKKKVEEAKQKVDAAKQKVDAEHAKEVAPQAKIAELENQVHRLEQDLKDINES 221

Query: 113 DSNDAYLE 120
           DS D   E
Sbjct: 222 DSEDYVKE 229


>gi|170035484|ref|XP_001845599.1| slender lobes [Culex quinquefasciatus]
 gi|167877511|gb|EDS40894.1| slender lobes [Culex quinquefasciatus]
          Length = 1194

 Score = 36.1 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              + L     K+E+      +  E + L +  + L   +   K   DRL ++ ++L+  
Sbjct: 293 QLKRELEEFKRKSEEDAFVALDQTELEELRKNYEALTAEVERWKTDCDRLQEDNLVLQKK 352

Query: 77  LEE--DDCSILQETSDNLQRIKLEVEYKQFES 106
           LEE   D + + +    +  ++ E+     ++
Sbjct: 353 LEERKPDETQVAQLQQEVSELQNELRSVIIDN 384


>gi|217972076|ref|YP_002356827.1| ABC transporter-like protein [Shewanella baltica OS223]
 gi|217497211|gb|ACK45404.1| ABC transporter related [Shewanella baltica OS223]
          Length = 637

 Score = 36.1 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 9/74 (12%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +RL+ L     D  L+    +AK        L + ++    +   L D+  +  L L
Sbjct: 572 KLSERLAELEHLLADSELYDQDNKAK--------LTSVLTERTSLTQTLEDS-EMQWLEL 622

Query: 78  EEDDCSILQETSDN 91
           +E+  ++  E  + 
Sbjct: 623 QEEIDAMELEVMEQ 636


>gi|167646499|ref|YP_001684162.1| ABC transporter-like protein [Caulobacter sp. K31]
 gi|167348929|gb|ABZ71664.1| ABC transporter related [Caulobacter sp. K31]
          Length = 627

 Score = 36.1 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           L R++     +       ++L+ L  +  DP L++N  +   L + R +    +   + 
Sbjct: 557 LKRKIEAAEQV--VTRTTRQLAELEAQLADPQLYKNPAKVAELTKRRDNAKAKLDEAEA 613


>gi|308176781|ref|YP_003916187.1| peptidyl-tRNA hydrolase domain-containing protein [Arthrobacter
           arilaitensis Re117]
 gi|307744244|emb|CBT75216.1| peptidyl-tRNA hydrolase domain-containing protein [Arthrobacter
           arilaitensis Re117]
          Length = 140

 Score = 36.1 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 30/116 (25%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH------------------------IPTG 258
           I  ++      R+SG GGQH+NTTDS V ++                         +   
Sbjct: 11  IPAAELNWQFSRSSGPGGQHLNTTDSRVELSWVIGASRVLSDWQRQRLLSKLGSKLVAGA 70

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +VV   +ERSQ +N+  A   L   +      +R    +      T+   G Q R 
Sbjct: 71  LVVTAAEERSQWRNRQIAQEKLAHLI------QRALAPDAPVRKATKPTRGSQRRR 120


>gi|254718827|ref|ZP_05180638.1| ABC transporter ATP-binding protein [Brucella sp. 83/13]
 gi|265983813|ref|ZP_06096548.1| ABC transporter [Brucella sp. 83/13]
 gi|306838750|ref|ZP_07471584.1| ABC transporter ATP-binding protein [Brucella sp. NF 2653]
 gi|264662405|gb|EEZ32666.1| ABC transporter [Brucella sp. 83/13]
 gi|306406152|gb|EFM62397.1| ABC transporter ATP-binding protein [Brucella sp. NF 2653]
          Length = 627

 Score = 36.1 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  +  L       +++   + + EDP  ++   E +  +R  + + +A S + E 
Sbjct: 555 LQKKIKEIESL--IQKLQKQIQDFSMQLEDPAFYE--KEPQKAIRINKDMSDAKSTLAEA 610

Query: 63  QDRLCDNLILLELALEE 79
           +D+  +     E A+ E
Sbjct: 611 EDKWLELSAEYEEAMAE 627


>gi|297587287|ref|ZP_06945932.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Finegoldia magna ATCC 53516]
 gi|297575268|gb|EFH93987.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Finegoldia magna ATCC 53516]
          Length = 637

 Score = 36.1 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK 60
           KL +Q+  +    + D   +R+  +        ++ +  +   L  E ++L  +  S   
Sbjct: 565 KLRKQIETIES--NIDKIDERIKEIEDMFCQNDIYDDPKKILQLNEELENLNADKNSLYS 622

Query: 61  EIQDRLCDNLI 71
           + +D+  +   
Sbjct: 623 DWEDKQLEYED 633


>gi|225558581|gb|EEH06865.1| DENN domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 932

 Score = 36.1 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 26/149 (17%)

Query: 1   MKLSRQLNCLGGLFD--WDNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI 56
           M+  +    L G  D       +R +FL  + E       +    A+ L +E   L   I
Sbjct: 509 MEAWQDFINLKGRMDTELSKVTKRNNFLVEELETWKQQFLKFQAFAEQLTKETSELKVKI 568

Query: 57  SFIKE-------IQDRLCDNLILLEL-----ALEEDDC--------SILQETSDNLQRIK 96
              K        + D+  D+   L L       + DD          I +E     +R  
Sbjct: 569 ESHKRENRRLTGLIDQQKDDAARLTLRLSGTEKQRDDALEALVLQQEIAEELERERKRNT 628

Query: 97  LEVEYKQF--ESLLSGEADSNDAYLEVHA 123
            E+   Q   ++LL    ++    L + +
Sbjct: 629 KEISALQHTSDTLLRQRDEAQRVVLHLRS 657


>gi|254478026|ref|ZP_05091410.1| ATP-dependent chaperone ClpB [Carboxydibrachium pacificum DSM
           12653]
 gi|214036030|gb|EEB76720.1| ATP-dependent chaperone ClpB [Carboxydibrachium pacificum DSM
           12653]
          Length = 864

 Score = 36.1 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 8/98 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++A Q++  ++ +  +     +  +A  L  + ++    I  I+ I++ + +  I +E A
Sbjct: 437 EDAKQKIEEIDREIAE---LND--KANQLSAQWKYEKELIKEIRRIKEEIEEVKIQIEEA 491

Query: 77  LEEDDCSILQETS-DNLQRIKLEVEYK--QFESLLSGE 111
               D + L E     L  ++ ++E K  +FE +   +
Sbjct: 492 ERNYDLNKLSELKYGKLFGLQKKLEQKRQEFEKIPPDK 529


>gi|301752870|ref|XP_002912326.1| PREDICTED: protein fantom-like [Ailuropoda melanoleuca]
          Length = 1243

 Score = 36.1 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 21/137 (15%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAI 56
           ++ S  L+ + G F      QR    + +     L  N  E    ++E++     L+  +
Sbjct: 276 VEKSNALSVMEGKFIQLQEKQR----SLRISHDALMANGDELNRQLKEQRLKCCSLEKQL 331

Query: 57  -------SFIKEIQDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLEVEYKQ 103
                    I+E+QDR+ D     EL  E  D       S   E    L+  +L+V+  Q
Sbjct: 332 HSMTFSERRIEELQDRINDLEKERELLKENYDKLYNSAFSAAHEEQWKLKEQQLKVQIAQ 391

Query: 104 FESLLSGEADSNDAYLE 120
            E+ L  +       L+
Sbjct: 392 LETALKSDLTDKTEILD 408


>gi|152999399|ref|YP_001365080.1| ABC transporter-like protein [Shewanella baltica OS185]
 gi|160874020|ref|YP_001553336.1| ABC transporter-like protein [Shewanella baltica OS195]
 gi|151364017|gb|ABS07017.1| ABC transporter related [Shewanella baltica OS185]
 gi|160859542|gb|ABX48076.1| ABC transporter related [Shewanella baltica OS195]
 gi|315266247|gb|ADT93100.1| ABC transporter related protein [Shewanella baltica OS678]
          Length = 637

 Score = 36.1 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 9/74 (12%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +RL+ L     D  L+    +AK        L + ++    +   L D+  +  L L
Sbjct: 572 KLSERLAELEHLLADSELYDQDNKAK--------LTSVLTERTSLTQTLEDS-EMQWLEL 622

Query: 78  EEDDCSILQETSDN 91
           +E+  ++  E  + 
Sbjct: 623 QEEIDAMELEVMEQ 636


>gi|332076363|gb|EGI86826.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
           protein [Streptococcus pneumoniae GA41301]
          Length = 446

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 10  LGGLFDWDN-AVQRL-SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +GG+   D    ++L   LN +          +  + + R  +H++     ++  +    
Sbjct: 206 MGGIKKLDTYLKEKLQEELNQEQT--------LRYRDMERYSRHIEELYKEVRSFRHDYT 257

Query: 68  DNLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFES 106
           + L  L L +EE+D   ++E  D  L+    +++  +++ 
Sbjct: 258 NLLTSLRLGIEEEDMEQIKEVYDLVLKDSSKKLQDNKYDL 297


>gi|313124274|ref|YP_004034533.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312280837|gb|ADQ61556.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 630

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 3/61 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D +    +   +     DP +  +  +   L  E   +   IS   ++     D  + LE
Sbjct: 572 DLEELEAKEQEIQEAMADPAIAADFSKLGPLQEELTAVQEKIS---QVSQAWEDASLALE 628

Query: 75  L 75
            
Sbjct: 629 E 629


>gi|301165780|emb|CBW25352.1| putative ABC transporter ATP-binding protein [Bacteriovorax marinus
           SJ]
          Length = 614

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKE 61
           L ++++ L    D     +++  +N +  +     +  +   L R    L   +    +E
Sbjct: 533 LKKRMDELES--DIFAKEEKIDEINDQMLEASSSGDNKKISELSRNLGVLQKLLDIEYEE 590

Query: 62  I---QDRLCDNLILLELALEE 79
           +    D+  + +   E  L E
Sbjct: 591 LSTITDKHEEIIQSFEDRLNE 611


>gi|159131891|ref|NP_766048.1| nephrocystin-3 isoform b [Mus musculus]
          Length = 462

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +DR+
Sbjct: 115 LDTENKRLR-AELQAL---------QKTYQKILREKEGALEAKYQAMERAVTFEHDRDRV 164

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 165 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 221

Query: 127 GTESQDWAN 135
           GT+ + WA+
Sbjct: 222 GTQCEYWAS 230


>gi|331088980|ref|ZP_08337887.1| hypothetical protein HMPREF1025_01470 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330406432|gb|EGG85945.1| hypothetical protein HMPREF1025_01470 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 618

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NC   +   D    R   +  +  +     +   AK L +ER+ L+  ++ +  +   L
Sbjct: 389 INCFADMAVNDEKAVR--AIEKRLTE----TDQSRAKALEKERKKLNKRLAELDRLFSSL 442

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
            ++ ++ E   E +     +  S   Q+ +LE+E +  E 
Sbjct: 443 YEDKVM-ERITERN----FEMMSGKYQKEQLEIEARLKEV 477


>gi|326915681|ref|XP_003204142.1| PREDICTED: utrophin-like, partial [Meleagris gallopavo]
          Length = 2483

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 1   MKLSRQLNCLGGLFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           M+L ++   L  L DW     +R+  + ++     L  ++   +  + E ++L N +   
Sbjct: 412 MELQKK--QLQQLSDWLTVTEERIQKMESQL----LADDLETLQKQLEEHKNLQNDLEAE 465

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           +   + L   +++++  + ++D  + ++T D L  +  +V  
Sbjct: 466 QVKVNSLTHMVVIVDEXILKEDMGMKRQTLDQLNELGQDVAQ 507


>gi|302892593|ref|XP_003045178.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726103|gb|EEU39465.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 743

 Score = 36.1 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 13/104 (12%)

Query: 5   RQLNCLGGLFD-----------WDNAVQRLSFL-NTKTEDPHLWQNV-IEAKMLMRERQH 51
            +   +   FD           +D   +++  L      DP  + N       L ++   
Sbjct: 335 ERWEDVRRSFDAVVEDGRTDPNFDELARQIGNLVQDMLSDPDFFDNAEERFNRLRKQSNE 394

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           L    S   ++ + L +     +  LE+ D   L  T++ L ++
Sbjct: 395 LTAKSSIKDDLDNLLGNLHAAFQSVLEDTDIKKLIHTTERLAQL 438


>gi|298293743|ref|YP_003695682.1| class I peptide chain release factor [Starkeya novella DSM 506]
 gi|296930254|gb|ADH91063.1| Class I peptide chain release factor [Starkeya novella DSM 506]
          Length = 143

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 7/82 (8%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV-----VVQCQQERSQHK--NKAQ 275
           + E++      RASG GGQ+VN   +AV++     G      VV+ + ER   +   K  
Sbjct: 10  LDENEIEESFVRASGPGGQNVNKVSTAVQLRFDVRGSKTLPDVVKARLERIAGRRLTKEG 69

Query: 276 AWNMLRAKLYELELQKREEIAN 297
           A  ++  +    E  + + +A 
Sbjct: 70  AIVLIAQRYRTQERNREDALAR 91


>gi|296804636|ref|XP_002843170.1| apsB [Arthroderma otae CBS 113480]
 gi|238845772|gb|EEQ35434.1| apsB [Arthroderma otae CBS 113480]
          Length = 1530

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIK 60
           +L  Q++ L    D      +L     +       +   E   + +E ++L +     ++
Sbjct: 782 ELRDQVSALK--LDNQGLRSQLDEYANELSSVER-EYQAELDRVGQELRNLQSQRDQALQ 838

Query: 61  EIQDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQ 103
            I+ R  D   L   A EE D     L    +   R++LEV+ +Q
Sbjct: 839 AIEAREADLQDLKVEAQEELDAMGEELDLKHEECHRLELEVQTQQ 883


>gi|189502005|ref|YP_001957722.1| hypothetical protein Aasi_0592 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497446|gb|ACE05993.1| hypothetical protein Aasi_0592 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 1574

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 46  MRER-QHLDNAI-SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           ++E    L+N +   +K++++ L      LE   EEDD  + ++ S  L+  +L ++YK+
Sbjct: 273 LKEYQARLENELKENLKKLKEDLEKLQEDLEKLQEEDDTKVKEKASKQLKH-ELLIKYKR 331

Query: 104 FESLLSGEADSNDAYLEV 121
            E          +  LE+
Sbjct: 332 IELQKKNPTQLKNELLEI 349


>gi|169622619|ref|XP_001804718.1| hypothetical protein SNOG_14536 [Phaeosphaeria nodorum SN15]
 gi|160704810|gb|EAT78076.2| hypothetical protein SNOG_14536 [Phaeosphaeria nodorum SN15]
          Length = 990

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 24/132 (18%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTK------TEDPHLWQNVIEAKMLMRER-QHLDN 54
           +L +++       D     +R   L              LW  V EA+  + E    L+ 
Sbjct: 175 RLRKKME------DLAAKARRAESLERMRAKETTIAHQALWAAVQEAEAGVAEVESELEK 228

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSIL--QETSDNLQRIKLEVEYKQ--------- 103
             + I+  +  + +     E + E  D + L  QE ++ +   K EV   +         
Sbjct: 229 VSAVIERRKALVEEASQAYERSEEARDAATLRVQEATELMTPAKEEVHELKEAFTKIKDR 288

Query: 104 FESLLSGEADSN 115
             +LL  E ++ 
Sbjct: 289 LRALLPDERNAE 300


>gi|189350006|ref|YP_001945634.1| peptidyl-tRNA hydrolase domain protein [Burkholderia multivorans
           ATCC 17616]
 gi|221201443|ref|ZP_03574482.1| class I peptide chain release factor [Burkholderia multivorans
           CGD2M]
 gi|221208002|ref|ZP_03581008.1| class I peptide chain release factor [Burkholderia multivorans
           CGD2]
 gi|221213998|ref|ZP_03586971.1| class I peptide chain release factor [Burkholderia multivorans
           CGD1]
 gi|189334028|dbj|BAG43098.1| putative peptidyl-tRNA hydrolase [Burkholderia multivorans ATCC
           17616]
 gi|221166175|gb|EED98648.1| class I peptide chain release factor [Burkholderia multivorans
           CGD1]
 gi|221172187|gb|EEE04628.1| class I peptide chain release factor [Burkholderia multivorans
           CGD2]
 gi|221178711|gb|EEE11119.1| class I peptide chain release factor [Burkholderia multivorans
           CGD2M]
          Length = 134

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 24/98 (24%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PTGV 259
           +  +D      RA GAGGQ+VN   SA+ +                            GV
Sbjct: 7   LDPADVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPPVLKERLLALSDQRITRDGV 66

Query: 260 VV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           VV + Q+ R+Q KN+  A   L A +  +    R  IA
Sbjct: 67  VVIKSQEYRTQDKNREAALARLDALIRSVAFTPRARIA 104


>gi|146296476|ref|YP_001180247.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166201242|sp|A4XJH1|SYS_CALS8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145410052|gb|ABP67056.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 420

 Score = 36.1 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 45/112 (40%), Gaps = 19/112 (16%)

Query: 9   CLGGLFDWDNAVQRL-SFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKEIQDR 65
            +  + + D   ++L + +          QN    +   L +E +     ++ +KE+ D+
Sbjct: 26  SIAPILELDEKRRKLLAEVEKMKA----IQNQKSKEIPKLKKEGKDTTELMNELKELSDK 81

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           + +              S ++E  D +++I L +     ES+  G+ D+ + 
Sbjct: 82  IKEL------------DSQVKEVEDEIEKILLTIPNIPHESVPIGKDDTENV 121


>gi|323098549|gb|ADX22787.1| cowpox A-type inclusion protein [Monkeypox virus]
          Length = 696

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 22/110 (20%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLI 71
           D + A ++L+ LN +  D            L + R    +++     I  +   + +   
Sbjct: 427 DLEEAKRKLTELNEELSD-----------KLSKIRTLERDSVYKTERIDRLTTEIKELRD 475

Query: 72  LLELALE------EDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEAD 113
           + +   +      E D   ++E  ++L  +R       K+ +++  G+ D
Sbjct: 476 MQQNGTDDGSDSSEIDKKTIRELRESLDMEREMRSELEKELDTIRDGKVD 525


>gi|300872763|gb|ADK39165.1| cowpox A-type inclusion protein [Monkeypox virus]
          Length = 696

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 22/110 (20%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLI 71
           D + A ++L+ LN +  D            L + R    +++     I  +   + +   
Sbjct: 427 DLEEAKRKLTELNEELSD-----------KLSKIRTLERDSVYKTERIDRLTTEIKELRD 475

Query: 72  LLELALE------EDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEAD 113
           + +   +      E D   ++E  ++L  +R       K+ +++  G+ D
Sbjct: 476 MQQNGTDDGSDSSEIDKKTIRELRESLDMEREMRSELEKELDTIRDGKVD 525


>gi|294673435|ref|YP_003574051.1| ABC transporter ATP-binding protein [Prevotella ruminicola 23]
 gi|294472284|gb|ADE81673.1| ABC transporter, ATP-binding protein [Prevotella ruminicola 23]
          Length = 565

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 1/109 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N + G+    +A+     +N K   P  +++  +   LM+ +  L + I           
Sbjct: 95  NVMEGVQHVYDALAEYDEINVKFGLPEYYEDADKMDKLMQRQAELQDIIDATDAWNMDSK 154

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSN 115
            +  +  L     D S+   +    +R+ L  +  ++ + LL  E  ++
Sbjct: 155 LDRAMAALNCPPGDWSVKNLSGGERRRVALCRLLLQKPDVLLLDEPTNH 203


>gi|257870129|ref|ZP_05649782.1| ABC transporter [Enterococcus gallinarum EG2]
 gi|257804293|gb|EEV33115.1| ABC transporter [Enterococcus gallinarum EG2]
          Length = 652

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 9/77 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R++  +    D       L  +      P    + +           L+ A+  ++  
Sbjct: 573 LQRKVTQIEA--DLAKTEAELEEIEQAMTRPDALNDHVR-------LSSLNQAMETVQAT 623

Query: 63  QDRLCDNLILLELALEE 79
           Q++L +      L LEE
Sbjct: 624 QEQLMEAWENTSLELEE 640


>gi|1916856|gb|AAB51248.1| A-type inclusion body protein [Monkeypox virus]
 gi|68449017|gb|AAY97139.1| cowpox A-type inclusion protein [Monkeypox virus]
 gi|68449219|gb|AAY97340.1| cowpox A-type inclusion protein [Monkeypox virus]
          Length = 696

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 22/110 (20%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLI 71
           D + A ++L+ LN +  D            L + R    +++     I  +   + +   
Sbjct: 427 DLEEAKRKLTELNEELSD-----------KLSKIRTLERDSVYKTERIDRLTTEIKELRD 475

Query: 72  LLELALE------EDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEAD 113
           + +   +      E D   ++E  ++L  +R       K+ +++  G+ D
Sbjct: 476 MQQNGTDDGSDSSEIDKKTIRELRESLDMEREMRSELEKELDTIRDGKVD 525


>gi|17975050|ref|NP_536564.1| A27L [Monkeypox virus Zaire-96-I-16]
 gi|17529917|gb|AAL40595.1|AF380138_137 A27L [Monkeypox virus Zaire-96-I-16]
          Length = 696

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 22/110 (20%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLI 71
           D + A ++L+ LN +  D            L + R    +++     I  +   + +   
Sbjct: 427 DLEEAKRKLTELNEELSD-----------KLSKIRTLERDSVYKTERIDRLTTEIKELRD 475

Query: 72  LLELALE------EDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEAD 113
           + +   +      E D   ++E  ++L  +R       K+ +++  G+ D
Sbjct: 476 MQQNGTDDGSDSSEIDKKTIRELRESLDMEREMRSELEKELDTIRDGKVD 525


>gi|46395873|sp|Q8HY00|CD209_PONPY RecName: Full=CD209 antigen; AltName: Full=Dendritic cell-specific
           ICAM-3-grabbing non-integrin 1; Short=DC-SIGN1; AltName:
           CD_antigen=CD209
 gi|27356901|gb|AAL89541.1| putative CD209 protein [Pongo pygmaeus]
          Length = 404

 Score = 36.1 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 41  EAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           + + + +E   L  A+  +    ++Q+   +   L     E  + S LQE    L ++K 
Sbjct: 188 KLQEIYQELTRLKAAVDELPEKSKLQEIYQELTQLKAAVGELPEKSRLQEIYQELTQLKA 247

Query: 98  EVEYK 102
            VE  
Sbjct: 248 AVERL 252


>gi|332254390|ref|XP_003276313.1| PREDICTED: m-phase phosphoprotein 9-like [Nomascus leucogenys]
          Length = 1174

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 43/101 (42%), Gaps = 5/101 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74
               RL  L  + E+ +   +  EA+ L +E +   + +   + +     R+ D L   E
Sbjct: 703 RLKSRLQDLEEEFENAYKLSDDKEAQ-LKQENKMFQDLLGEYESLGKEHRRVKDALNTTE 761

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
                D  + + +    + +++ +V+  + E++LS   +S 
Sbjct: 762 -NKLLDAYTQISDLKRMISKLEAQVKQVEHENMLSLRHNSR 801


>gi|297569565|ref|YP_003690909.1| Class I peptide chain release factor [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925480|gb|ADH86290.1| Class I peptide chain release factor [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 138

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 24/116 (20%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PTGV 259
           I E++      RA G GGQHVN   +A+++                            GV
Sbjct: 9   IPETELAFTAIRAGGPGGQHVNKVSTAIQLFFDIRASSLPEPYKERLLALNDRRISADGV 68

Query: 260 VV-QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           VV +  + RSQ KNK +A   LR  +  +  + ++        +  E     + R+
Sbjct: 69  VVIKAVRHRSQEKNKEEARQRLRELIAAVTKEPKKRKPTRPTKAAKERRLAAKTRT 124


>gi|224477793|ref|YP_002635399.1| hypothetical protein Sca_2311 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422400|emb|CAL29214.1| hypothetical protein SCA_2311 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 545

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 24/119 (20%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQN-VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D    R+  L  +      + N   +A     E   LD  I   ++++  L D  I    
Sbjct: 27  DKLSLRMKELEIE------FDNLNEDALNTSEE---LDELIEIFEDMEKNLDDYEINF-- 75

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF-----------ESLLSGEADSNDAYLEVHA 123
             EED    +   SD L+ I   +   +            E LL+ +  +ND ++++HA
Sbjct: 76  -AEEDIEEAMTLNSDELEEINASITQYEQLDYVEFNDDWDEFLLNNKNYANDYWIDLHA 133


>gi|254440072|ref|ZP_05053566.1| hypothetical protein OA307_4942 [Octadecabacter antarcticus 307]
 gi|198255518|gb|EDY79832.1| hypothetical protein OA307_4942 [Octadecabacter antarcticus 307]
          Length = 159

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 25/93 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------------------------ 253
           +  IEI + +      RASG GGQ+VN   +AV +                         
Sbjct: 26  NDSIEIEDWELTEQFVRASGPGGQNVNKVSTAVELRFEAARSPALSGPVKTRLRRLAGRK 85

Query: 254 HIPTGVVV-QCQQERSQHKNKAQAWNMLRAKLY 285
               G V+   Q  RSQ +N+  A + L   + 
Sbjct: 86  WTGDGAVILFVQDTRSQARNREIARDRLAELIR 118


>gi|188997509|ref|YP_001931760.1| ATPase AAA-2 domain protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932576|gb|ACD67206.1| ATPase AAA-2 domain protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 994

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 13/102 (12%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-----------EIQDRL 66
              +++  L+ +     L  +  +   L  E+ +L+  +  +K           E+Q +L
Sbjct: 551 ELERKIKMLDEQIIQASLDGDYEKEAKLKIEKANLEKQLKDLKTKSSNERTKLEELQRQL 610

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
            +    +E   ++ D    +E    +++ ++E E K  +  L
Sbjct: 611 EEIEKQIEFYSQKGDYE--KEAEYKIKKAQIEKEIKALQQKL 650


>gi|167770349|ref|ZP_02442402.1| hypothetical protein ANACOL_01692 [Anaerotruncus colihominis DSM
           17241]
 gi|167667671|gb|EDS11801.1| hypothetical protein ANACOL_01692 [Anaerotruncus colihominis DSM
           17241]
          Length = 1074

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 48/123 (39%), Gaps = 5/123 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            + LS L T  + P L       + LMR+ Q  +  +  +  +  +L D  +L E+   +
Sbjct: 855 EKYLSDLLTAVQQPEL---KEYLEKLMRDLQDNEENLHTLILLLRQLDDMNLLDEVENID 911

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           D    L +    +Q ++ +++  +    L    ++ D  L +       E +D    +  
Sbjct: 912 DLREDLSDLRPIVQSLRRDLDRAEMNKSLHASPETVDTLLRMK--DDLEEHRDIMETMRN 969

Query: 140 MYT 142
           M  
Sbjct: 970 MLQ 972


>gi|284166914|ref|YP_003405193.1| histidine kinase [Haloterrigena turkmenica DSM 5511]
 gi|284016569|gb|ADB62520.1| histidine kinase [Haloterrigena turkmenica DSM 5511]
          Length = 483

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +  E K    + Q   N +S   ++++ L      LELA+E  D   ++E  D  +RI 
Sbjct: 226 DDRAELKKKNEDLQDFANIVS--HDLRNPLSVAEGYLELAVETGDEEYVREIKDAHKRID 283

Query: 97  LEVEY 101
             +E+
Sbjct: 284 RIIEH 288


>gi|224076429|ref|XP_002195240.1| PREDICTED: similar to rCG33450 [Taeniopygia guttata]
          Length = 2001

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 14/120 (11%)

Query: 15   DWDNAVQRLSFLNTKTEDPH--LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            D     Q+   L  + +D      ++      + ++ + L+  +   +E  D     + +
Sbjct: 1451 DIAGLTQKAEALEAELQDISSQESKDEASLAKVKKQLRDLEAKVKDQEEELDEQAGTIQM 1510

Query: 73   LELAL---EEDDCSILQETSDNLQRIKLEVEY---------KQFESLLSGEADSNDAYLE 120
            LE A    E +   + Q  +  ++    EVE          KQ E  L  E +     L 
Sbjct: 1511 LEQAKLRLEMEMERLRQTHAKEVESRDEEVEEIRQSYQKKLKQMEVQLEEEYEDKQKVLR 1570


>gi|145483965|ref|XP_001428005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395088|emb|CAK60607.1| unnamed protein product [Paramecium tetraurelia]
          Length = 775

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 39  VIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSI--LQETSDNLQ 93
             + + L +ERQ+++         K++  +  D +I L   L E D +I  LQE  D  +
Sbjct: 483 QEKLQELEKERQNIEEDKAQTDKYKQLLLKQRDIMIALTNRLNERDETILQLQEELDAYE 542

Query: 94  RIKLEVEY 101
           +++ E+E 
Sbjct: 543 KLQKELED 550


>gi|118373833|ref|XP_001020109.1| hypothetical protein TTHERM_00660460 [Tetrahymena thermophila]
 gi|89301876|gb|EAR99864.1| hypothetical protein TTHERM_00660460 [Tetrahymena thermophila
           SB210]
          Length = 1744

 Score = 36.1 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 13/99 (13%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIE---AKMLMRERQHLDNAISFIKEIQDRLCDN--- 69
            + A++++S L  KT      QN  +    +++M E   L   ++  K     + D+   
Sbjct: 622 LEQALEKISQLTNKT-----IQNQQQMTDYQLIMSENSQLRQELNQFKNHYQEMVDSHEK 676

Query: 70  --LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
               +L+   E +     +E   + ++++L  + K  ++
Sbjct: 677 RENEMLQRIRESEKEKAQKENESDKEKLRLNEKIKDLQN 715


>gi|323098746|gb|ADX22983.1| cowpox A-type inclusion protein [Monkeypox virus]
          Length = 696

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 22/110 (20%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLI 71
           D + A ++L+ LN +  D            L + R    +++     I  +   + +   
Sbjct: 427 DLEEAKRKLTELNEELSD-----------KLSKIRTLERDSVYKTERIDRLTTEIKELRD 475

Query: 72  LLELALE------EDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEAD 113
           + +   +      E D   ++E  ++L  +R       K+ +++  G+ D
Sbjct: 476 MQQNGTDDGSDSSEIDKKTIRELRESLDMEREMRSELEKELDTIRDGKVD 525


>gi|297621162|ref|YP_003709299.1| DNA protection during starvation family protein [Waddlia
           chondrophila WSU 86-1044]
 gi|297376464|gb|ADI38294.1| DNA protection during starvation family protein [Waddlia
           chondrophila WSU 86-1044]
          Length = 159

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D   +R+  LN K  D  +     +   + + +E    +   S I+  +  + D   + E
Sbjct: 68  DLIAERIRQLNKKV-DASVMAFSKKISIQEIHQELNGNEMLSSLIESYEQHISDMKNVFE 126

Query: 75  LALEEDDCSILQETSDNLQRIKLEV 99
            + EE+D S     ++ L+ ++  +
Sbjct: 127 QSEEENDPSTADILTEILRDLEKNL 151


>gi|226227934|ref|YP_002762040.1| hypothetical protein GAU_2528 [Gemmatimonas aurantiaca T-27]
 gi|226091125|dbj|BAH39570.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 146

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 26/131 (19%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI------------------------- 255
           + I   +  +      G GGQHVN + + + I                            
Sbjct: 15  VFIPFDELDVRAISGGGPGGQHVNKSATRISIQWNVRTTRALRDEQRARVLEKLASRLDG 74

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
              + +   + RSQ +N+  A   L+  +    +  R   A        E   G + R  
Sbjct: 75  DGALRIVAGEFRSQQQNRRAALERLQQLISRALIVPRVRRATRPTRGAVENRLGEKRRRS 134

Query: 316 VLQPYQMVKDL 326
             +  +   D 
Sbjct: 135 ETKQQRR-HDH 144


>gi|224122346|ref|XP_002318812.1| predicted protein [Populus trichocarpa]
 gi|222859485|gb|EEE97032.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 16/155 (10%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++N +  +   + A   L  L  + E   +         LM+ER  +++ +  + +++
Sbjct: 502 REKINAIEKMA--EEARCELETLRAEREKDDI--------ALMKERAAIESEMEVLSKLR 551

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +   L  L   + + S  +E    LQ+ + E E ++   L         A     A
Sbjct: 552 RELEE--QLQSLLSNKVEISYEKERISKLQK-EAESEKQEISRLQYDLEVERKALSMARA 608

Query: 124 GAGGT--ESQDWANMLLRMYTRWAEKRKFKTEALE 156
            A      +++ A  L     RW EK   K     
Sbjct: 609 WAEDEAKRAREQAKALEEARYRW-EKHGIKVVVDS 642


>gi|254500775|ref|ZP_05112926.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
 gi|222436846|gb|EEE43525.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
          Length = 603

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           D +    +L  L +   DP L+  N  +   L  +   L         ++++  +  +L 
Sbjct: 545 DIEKIEAQLEKLQSDMNDPELYAKNPDKFAKLSAQITDLSTKKD---AMEEQWLELEMLN 601

Query: 74  E 74
           E
Sbjct: 602 E 602


>gi|170084669|ref|XP_001873558.1| dynactin [Laccaria bicolor S238N-H82]
 gi|164651110|gb|EDR15350.1| dynactin [Laccaria bicolor S238N-H82]
          Length = 1246

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 11/107 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIK 60
           +L  Q      L    NA  ++  L  +        + + A+ ++ +    +  +   I+
Sbjct: 428 ELQSQYE--ESLIKLSNAETQIEDLKLQL------DDALGAEEMLVQLTERNLMLGEKIE 479

Query: 61  EIQDRLCDNLILLEL--ALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           E++  + D   L EL   LEE+     ++  ++L R  L++     +
Sbjct: 480 EMRITIEDLEALKELNDELEENHMETEKQLHEDLDRRDLQIREHVHK 526


>gi|125974963|ref|YP_001038873.1| phage minor structural GP20 [Clostridium thermocellum ATCC 27405]
 gi|125715188|gb|ABN53680.1| phage minor structural GP20 [Clostridium thermocellum ATCC 27405]
          Length = 185

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 32/73 (43%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           ++ + L   +   +E+  ++ D     + A EE +  I   T DN  ++ L+    ++E 
Sbjct: 55  KQLKDLGEKVKDNEELTKQIKDLQEANKKAKEEYETKIKNLTLDNAIKLALKEHKAKYED 114

Query: 107 LLSGEADSNDAYL 119
           LL  + D     +
Sbjct: 115 LLVNKFDREKLVI 127


>gi|94971790|ref|YP_593838.1| ATPase AAA-2 [Candidatus Koribacter versatilis Ellin345]
 gi|94553840|gb|ABF43764.1| ATPase AAA-2 [Candidatus Koribacter versatilis Ellin345]
          Length = 878

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 25/136 (18%)

Query: 16  WDNAVQRLSFLNTK---TEDPHLWQNVIEAKMLMRERQHL--------------DNAISF 58
            D   +R++ L  +    +      +     ++ +E   L                +I  
Sbjct: 415 VDELERRITQLEIERQALKREEDTNSRERLAVIEKELAGLRERSNALKARWKDEKQSIGR 474

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFE-------SLLSG 110
           I+E+++++    +  + A  + D     +     L +++ E++    E        +L  
Sbjct: 475 IRELKEKIEQIKLQAQTASNKGDYEKAAQLQYGELPKLQAELDNLSAESDSKTSPRMLKE 534

Query: 111 EADSNDAYLEVHAGAG 126
           E D  D    V    G
Sbjct: 535 EVDEEDVAKIVSKWTG 550


>gi|77361807|ref|YP_341382.1| ABC transporter ATP-binding protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876718|emb|CAI87940.1| putative ABC transporter, ATP-binding protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 640

 Score = 36.1 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 11/92 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +Q+  L    D       L+ +     D  L+ +  +AK        L   ++    +
Sbjct: 560 LKKQIEKLEKQLD--KYAAELNEVEVALGDNELYSDDNKAK--------LKELLAKQATL 609

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQR 94
             +L D    L +AL+E      Q  +D L +
Sbjct: 610 TPKLNDIEEALLMALDE-MEQKEQAFADELAQ 640


>gi|234204033|gb|ACQ91270.1| myosin heavy chain variant B [Bombyx mandarina]
          Length = 791

 Score = 36.1 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 16/75 (21%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCSILQ 86
           +    E Q  ++ ++ + +++ +L   L  LE +LE                E D  + Q
Sbjct: 595 QKTSEELQAAEDKVNHLNKVKQKLEQTLDELEDSLEREKKLRADVEKQRRKVEGDLKLTQ 654

Query: 87  ETSDNLQRIKLEVEY 101
           E   +L+R K E+E 
Sbjct: 655 EAVADLERNKKELEQ 669


>gi|312218093|emb|CBX98039.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1573

 Score = 36.1 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 47/113 (41%), Gaps = 15/113 (13%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D D +++R+  L ++  D +        + L R+ + L++  S  + +  +L      ++
Sbjct: 981  DRDASLRRIQNLESELSDAN--------QELSRQDKLLNDERSKNERLDIQLESCQGEID 1032

Query: 75   LALEEDDCSILQ--ETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLE 120
               EE +   ++  E        ++++E ++      E  +S E    DA + 
Sbjct: 1033 FLREEQEGDKIKIGELEAAFNNAQIQLEDEKERLRDLEQRISEERQQRDALVT 1085


>gi|269793280|ref|YP_003318184.1| SMC domain-containing protein [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100915|gb|ACZ19902.1| SMC domain protein [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 892

 Score = 36.1 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVI-EAKMLMRERQHLDNAISFIK 60
           +L+R+L  L    D+  A++    L  +  D     +   + +   + R+ L+     + 
Sbjct: 644 ELARRLGELQRELDFAAALE--EDLARRMAD---LGDPEGDLRAAAKAREDLE---GGLS 695

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +++ RL      LE  +     S L    + ++ ++ E+  +   +
Sbjct: 696 QLRSRLAREEGQLEALMNRGLYSQLASLEEEIEDLRRELAEEDLRA 741


>gi|228473427|ref|ZP_04058180.1| DNA polymerase type I [Capnocytophaga gingivalis ATCC 33624]
 gi|228275034|gb|EEK13837.1| DNA polymerase type I [Capnocytophaga gingivalis ATCC 33624]
          Length = 931

 Score = 36.1 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 14/84 (16%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLI-----------LLELALEED---DCSIL 85
             A+ L++E   L+N +    +++ +L +N+            L  + L+     D    
Sbjct: 201 KTAQKLLKEFGSLENLLDNTDKLKGKLRENIEANKDKGILSKTLARIILDVPVTFDEKDF 260

Query: 86  QETSDNLQRIKLEVEYKQFESLLS 109
           + +S  +  I+   E  +F ++L+
Sbjct: 261 ELSSPKMAEIEPLFEELEFRTMLT 284


>gi|156554705|ref|XP_001604907.1| PREDICTED: similar to dynein, axonemal, heavy chain 2 [Nasonia
            vitripennis]
          Length = 4490

 Score = 36.1 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 7    LNCLGGLFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEI 62
            +N L   FD D+   + L  ++  T +P       +  ++    + L   +       ++
Sbjct: 3216 INTLRD-FDKDHISDKTLRTISKYTSNPEF--EPEKVGIVSNAAKSLSMWVIAMEQYGKL 3272

Query: 63   QDRLCDNLILLE--LALEEDDCSILQETSDNLQRIKLEVEYKQ 103
               +      LE  LA   +  + L E    LQ+++ E+E  Q
Sbjct: 3273 YRIVAPKREKLEAALASLREKETALAEARAQLQKLQEELERLQ 3315


>gi|114564744|ref|YP_752258.1| hypothetical protein Sfri_3592 [Shewanella frigidimarina NCIMB 400]
 gi|114336037|gb|ABI73419.1| Class I peptide chain release factor [Shewanella frigidimarina
           NCIMB 400]
          Length = 138

 Score = 36.1 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 24/82 (29%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PT 257
           + + +++      R+SGAGGQH+N   +A +++                          +
Sbjct: 8   VILQDNEIEWQFVRSSGAGGQHINKVSTAAQLSFDIASSSLPEFYQQKLLEKADHRITKS 67

Query: 258 GVV-VQCQQERSQHKNKAQAWN 278
           G V ++CQQ RSQ  N+  A  
Sbjct: 68  GKVIIKCQQSRSQDFNRQTALE 89


>gi|223932183|ref|ZP_03624187.1| Recombinase [Streptococcus suis 89/1591]
 gi|223899164|gb|EEF65521.1| Recombinase [Streptococcus suis 89/1591]
          Length = 547

 Score = 36.1 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NC   +   D    R   +  +  +     +   AK L +ER+ L+  ++ +  +   L
Sbjct: 318 INCFADMAVNDEKAVR--AIEKRLTE----TDQSRAKALEKERKKLNKRLAELDRLFSSL 371

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
            ++ ++ E   E +     +  S   Q+ +LE+E +  E 
Sbjct: 372 YEDKVM-ERITERN----FEMMSGKYQKEQLEIEARLKEV 406


>gi|197322816|gb|ACH69159.1| myosin heavy chain [Bombyx mori]
          Length = 791

 Score = 36.1 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 16/75 (21%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCSILQ 86
           +    E Q  ++ ++ + +++ +L   L  LE +LE                E D  + Q
Sbjct: 595 QKTSEELQAAEDKVNHLNKVKQKLEQTLDELEDSLEREKKLRADVEKQRRKVEGDLKLTQ 654

Query: 87  ETSDNLQRIKLEVEY 101
           E   +L+R K E+E 
Sbjct: 655 EAVADLERNKKELEQ 669


>gi|255024786|ref|ZP_05296772.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL
           J1-208]
          Length = 147

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 4/56 (7%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + +  +FD        L  +  +  +P L+ +  + + LM +   L       KEI
Sbjct: 85  DEMLSVFDSLRKMEADLRKMELRLGEPALYNDPEKYQALMTDYDTLQ---HTFKEI 137


>gi|261856071|ref|YP_003263354.1| DNA repair protein RecN [Halothiobacillus neapolitanus c2]
 gi|261836540|gb|ACX96307.1| DNA repair protein RecN [Halothiobacillus neapolitanus c2]
          Length = 554

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 17/132 (12%)

Query: 4   SRQLNCLGGLF-DWDNAVQRLSFLNTKTED------PHLWQNVIEAKMLMRERQHLDNAI 56
           +  L  LGGL  D          L  + +         L     +   L RE +H ++ +
Sbjct: 113 AATLKTLGGLLIDVHGQHHNQKLLEKRYQRLLLDSFAGLTGQTQKLAQLSRELRHNEHKL 172

Query: 57  SFIKEIQDRLCDNLILLELALEEDD-----CSILQETSDNLQRIKLEVE-----YKQFES 106
             I+  +    D   LL   LEE D          +    L R+  + E       Q E 
Sbjct: 173 EEIRNAEQSREDRRALLTFQLEEIDQIDPQPDEFNQCHQLLSRLSRQDEWRSVLAAQLEQ 232

Query: 107 LLSGEADSNDAY 118
           L  G+ + +D  
Sbjct: 233 LFDGDENVHDRI 244


>gi|224538942|ref|ZP_03679481.1| hypothetical protein BACCELL_03839 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519460|gb|EEF88565.1| hypothetical protein BACCELL_03839 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 862

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 23/125 (18%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA--------------ISFIKE 61
            D   +++  L  + E      +  + + + +E   L                 ++ I++
Sbjct: 410 LDEISRKIKQLEIEREAIKRENDKPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNRIQQ 469

Query: 62  IQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFES--------LLSGEA 112
            +  + +     + A  E D   + E     LQ +  E+E  Q E         ++  E 
Sbjct: 470 NKVEIENLKFEADKAEREGDYGKVAEIRYGKLQALNQEIEDTQKELHAMQGDKAMIKEEV 529

Query: 113 DSNDA 117
           D+ D 
Sbjct: 530 DAEDI 534


>gi|198431307|ref|XP_002121687.1| PREDICTED: similar to MGC68950 protein [Ciona intestinalis]
          Length = 1248

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           Q+L+ + T+  D    Q+       +RE ++ L   +       D + D    +E+A  +
Sbjct: 227 QQLTDVKTRMSDQ--IQDQA---KQIREIKKELQETVEDKARYVDEMSDVHETVEMATLD 281

Query: 80  DD--CSILQETSDNLQRIKLEVEYKQFES 106
            +     ++     ++ +  +VE  Q + 
Sbjct: 282 KEMAEEKVESMQREIEALTDKVEELQTDL 310


>gi|114797384|ref|YP_761226.1| ATP-dependent DNA helicase domain-containing protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114737558|gb|ABI75683.1| ATP-dependent DNA helicase, RecQ family/ UvrD/REP helicase domain
           protein [Hyphomonas neptunium ATCC 15444]
          Length = 1715

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILL----ELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
           E+  +   +  I+ +  RL  +  ++    E+  EE+D   +++++ +  R+K  V + +
Sbjct: 661 EKHEIAALLKAIRRLDQRLQKDGEVVATPGEIIKEEEDREFMRDSATDDTRVKTAVAWLE 720

Query: 104 FESLLSGEADSNDAY---LEVHA 123
              LL+ E +    Y   L++ +
Sbjct: 721 EAGLLTREHNRTHVYPSSLKIRS 743


>gi|58261906|ref|XP_568363.1| hypothetical protein CNM00390 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57230536|gb|AAW46846.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 188

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 32/123 (26%)

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
            +L+ I    S S      +  WV     +    +I +        R+SG GGQHVN T+
Sbjct: 25  VKLLHIPKLGSESEH--LLARQWVDAFTPE----DIPKEGWVATRSRSSGPGGQHVNKTE 78

Query: 248 SAV--------------------------RITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           S V                             H P  +++  Q  RS  +N+A A ++L 
Sbjct: 79  SKVTIRCDLDQAVGRWLPKFIMSALTKSTHYHHSPPSLLITSQTTRSASQNQANALSLLH 138

Query: 282 AKL 284
             +
Sbjct: 139 QTI 141


>gi|134118207|ref|XP_772233.1| hypothetical protein CNBM0390 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254843|gb|EAL17586.1| hypothetical protein CNBM0390 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 188

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 32/123 (26%)

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
            +L+ I    S S      +  WV     +    +I +        R+SG GGQHVN T+
Sbjct: 25  VKLLHIPKLGSESEH--LLARQWVDAFTPE----DIPKEGWVATRSRSSGPGGQHVNKTE 78

Query: 248 SAV--------------------------RITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           S V                             H P  +++  Q  RS  +N+A A ++L 
Sbjct: 79  SKVTIRCDLDQAVGRWLPKFIMSALTKSTHYHHSPPSLLITSQTTRSASQNQANALSLLH 138

Query: 282 AKL 284
             +
Sbjct: 139 QTI 141


>gi|314934120|ref|ZP_07841483.1| ABC transporter, ATP-binding protein [Staphylococcus caprae C87]
 gi|313653231|gb|EFS16990.1| ABC transporter, ATP-binding protein [Staphylococcus caprae C87]
          Length = 645

 Score = 36.1 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 27/62 (43%), Gaps = 11/62 (17%)

Query: 16  WDNAVQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQD 64
            +    ++         + T+   P ++ + I+A  L  ++ +    L+  +   +E+Q+
Sbjct: 584 IEQCEAKIEEFETHISYIETQLTQPEVFNDPIKAAELAEKKNNTEQKLEQVMLEWEELQE 643

Query: 65  RL 66
           +L
Sbjct: 644 KL 645


>gi|152975400|ref|YP_001374917.1| ABC transporter-related protein [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024152|gb|ABS21922.1| ABC transporter-related protein [Bacillus cytotoxicus NVH 391-98]
          Length = 630

 Score = 36.1 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 16  WDNAVQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           WD    +++ L  K E       ++  +  +A+ L   ++ L+  +    E    L D +
Sbjct: 567 WDTIEDKIAELEEKLEAVGEELANVGSDFTKAQELAEAQEQLEEQLEKAMERWSELSDIV 626

Query: 71  I 71
            
Sbjct: 627 E 627


>gi|303257703|ref|ZP_07343715.1| hypothetical protein HMPREF0189_01247 [Burkholderiales bacterium
           1_1_47]
 gi|331001016|ref|ZP_08324652.1| conserved domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|302859673|gb|EFL82752.1| hypothetical protein HMPREF0189_01247 [Burkholderiales bacterium
           1_1_47]
 gi|329569791|gb|EGG51555.1| conserved domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 1148

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 24/112 (21%)

Query: 20  VQRLSFLNTKTED---------PHLWQNVIEAKMLMRERQHLDNAISFIK---------- 60
           ++R+  L+ K ED           L+     A++L  E   L N +S +           
Sbjct: 323 LERVRELDEKIEDSQIQSKHLKEELFNEQTAARLLSEENTRLKNVLSQLTIRSQLLNKKM 382

Query: 61  ---EIQDRLCDNLILLELALEEDDCSILQ--ETSDNLQRIKLEVEYKQFESL 107
               +   L D L   +  L+E D  +++  E  +  + ++  +E  +   L
Sbjct: 383 DDLSMDKLLVDELEEYKRLLDEIDAEVIRSAEAEETQRELQKRIESSRSALL 434


>gi|302696997|ref|XP_003038177.1| hypothetical protein SCHCODRAFT_63658 [Schizophyllum commune H4-8]
 gi|300111874|gb|EFJ03275.1| hypothetical protein SCHCODRAFT_63658 [Schizophyllum commune H4-8]
          Length = 186

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 24/123 (19%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------HIP------------ 256
           V D   +EI  +   I   R+SG GGQ+VN  ++   +        IP            
Sbjct: 44  VQDFKSVEIPRNLVDITFSRSSGPGGQNVNKVNTKATLRCSVTSSWIPQWAGARLRESPH 103

Query: 257 -----TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGR 310
                  +++     RSQ +N  +    L   +        R E +   +     +    
Sbjct: 104 YVRATDSILLTSTAHRSQAQNIEECMRKLHNVIETASSADIRNEASPEQKQRVKALERAN 163

Query: 311 QIR 313
           + R
Sbjct: 164 KER 166


>gi|254449756|ref|ZP_05063193.1| class I peptide chain release factor [Octadecabacter antarcticus
           238]
 gi|198264162|gb|EDY88432.1| class I peptide chain release factor [Octadecabacter antarcticus
           238]
          Length = 139

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 25/93 (26%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------------------------ 253
           +  IEI + +      RASG GGQ+VN   +AV +                         
Sbjct: 6   NDSIEIEDWELTEQFVRASGPGGQNVNKVSTAVELRFEAARSPALTGPVKTRLKRLAGRK 65

Query: 254 HIPTGVVV-QCQQERSQHKNKAQAWNMLRAKLY 285
               G V+   Q  RSQ +N+  A   L   + 
Sbjct: 66  WTGDGAVILFVQDTRSQARNREIARERLADMIR 98


>gi|170288201|ref|YP_001738439.1| hypothetical protein TRQ2_0400 [Thermotoga sp. RQ2]
 gi|170175704|gb|ACB08756.1| conserved hypothetical protein [Thermotoga sp. RQ2]
          Length = 758

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 50/116 (43%), Gaps = 13/116 (11%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++++++L+ L          + +  L  K++D          K +M++       +S ++
Sbjct: 239 IEIAQKLDYLRER--GKELEKEIESLEEKSKDTE-----ERLKTIMKDFS-----VSSLE 286

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           E++ +L +  + +EL   E    +  E   +L+    E++ K  E+    E   +D
Sbjct: 287 ELKLKLENMKLQIELVENEQKAKL-NEIIGHLREPLREIDEKLEETQAKIENTGDD 341


>gi|159131889|ref|NP_082997.3| nephrocystin-3 isoform a [Mus musculus]
          Length = 1325

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +DR+
Sbjct: 115 LDTENKRLR-AELQAL---------QKTYQKILREKEGALEAKYQAMERAVTFEHDRDRV 164

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 165 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 221

Query: 127 GTESQDWAN 135
           GT+ + WA+
Sbjct: 222 GTQCEYWAS 230


>gi|149923921|ref|ZP_01912308.1| hypothetical protein PPSIR1_15600 [Plesiocystis pacifica SIR-1]
 gi|149815209|gb|EDM74757.1| hypothetical protein PPSIR1_15600 [Plesiocystis pacifica SIR-1]
          Length = 140

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 26/100 (26%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI------------------------- 255
           + I   +       + G GGQHVN   + V++                            
Sbjct: 10  VVIPARELSWTAVASGGPGGQHVNKVATKVQLRWTLANSESLPEWARARLVAAAGRFIDR 69

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREE 294
              +++ C   RSQ +N+  A   L   +   L+  KR  
Sbjct: 70  DGNLLISCASTRSQDRNRELARERLADMVRAALDRPKRRR 109


>gi|148269526|ref|YP_001243986.1| hypothetical protein Tpet_0384 [Thermotoga petrophila RKU-1]
 gi|147735070|gb|ABQ46410.1| hypothetical protein Tpet_0384 [Thermotoga petrophila RKU-1]
          Length = 758

 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 50/116 (43%), Gaps = 13/116 (11%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++++++L+ L          + +  L  K++D          K +M++       +S ++
Sbjct: 239 IEIAQKLDYLRER--GKELEKEIESLEEKSKDTE-----ERLKTIMKDFS-----VSSLE 286

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           E++ +L +  + +EL   E    +  E   +L+    E++ K  E+    E   +D
Sbjct: 287 ELKLKLENMKLQIELVENEQKAKL-NEIIGHLREPLREIDEKLEETQAKIENTGDD 341


>gi|330831208|ref|YP_004394160.1| peptidyl-tRNA hydrolase domain-containing protein [Aeromonas
           veronii B565]
 gi|328806344|gb|AEB51543.1| Peptidyl-tRNA hydrolase domain protein [Aeromonas veronii B565]
          Length = 138

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 24/117 (20%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-----------------------PT 257
           + I   + +  T RA G GGQHVN TDSAV +                            
Sbjct: 8   VTIPWHELQFQTMRAQGNGGQHVNKTDSAVWLRFDYRNSPSLTPLYKEGLDKLSDSRVHD 67

Query: 258 GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           G + ++ +  RSQ  N+ +A + L   L +   + +   A     S        + R
Sbjct: 68  GFILIRVESHRSQDMNRKEAMSRLVELLKKAAWRPKARHATKPTRSSQRKRVDTKKR 124


>gi|281411756|ref|YP_003345835.1| hypothetical protein Tnap_0317 [Thermotoga naphthophila RKU-10]
 gi|281372859|gb|ADA66421.1| conserved hypothetical protein [Thermotoga naphthophila RKU-10]
          Length = 758

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 50/116 (43%), Gaps = 13/116 (11%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++++++L+ L          + +  L  K++D          K +M++       +S ++
Sbjct: 239 IEIAQKLDYLRER--GKELEKEIESLEEKSKDTE-----ERLKTIMKDFS-----VSSLE 286

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           E++ +L +  + +EL   E    +  E   +L+    E++ K  E+    E   +D
Sbjct: 287 ELKLKLENMKLQIELVENEQKAKL-NEIIGHLREPLREIDEKLEETQAKIENTGDD 341


>gi|242050136|ref|XP_002462812.1| hypothetical protein SORBIDRAFT_02g032390 [Sorghum bicolor]
 gi|241926189|gb|EER99333.1| hypothetical protein SORBIDRAFT_02g032390 [Sorghum bicolor]
          Length = 848

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-- 76
            VQR   L     D   W +  + + +M+    L      ++ ++    +   L E    
Sbjct: 508 LVQRQKDLQAHMHD---WTDWAQ-QKVMQVAHRLAKEKDELQSLRKEKEEADRLQEERHH 563

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ 103
           LEE     L E    + R   ++E  +
Sbjct: 564 LEESTRKKLLEMESAISRANAQLEKAE 590


>gi|255080812|ref|XP_002503979.1| predicted protein [Micromonas sp. RCC299]
 gi|226519246|gb|ACO65237.1| predicted protein [Micromonas sp. RCC299]
          Length = 1022

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVI--EAKMLMRER-QHLDNAISFIKEIQDRLCDNLILL 73
           D   +RL+ +    +            AK +  E  + L++  +  + I  R  D  ++L
Sbjct: 834 DELQERLNAVEQMMKMFGEMSEHQYNTAKEIASEATRRLESTTNVDERIDKRFEDMTLML 893

Query: 74  ELALEEDDCSILQETSDNLQR 94
             A +E       E  + LQR
Sbjct: 894 REARDEGRAEGFTEARNELQR 914


>gi|270307641|ref|YP_003329699.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS]
 gi|270153533|gb|ACZ61371.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS]
          Length = 663

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 11/67 (16%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-----------KEIQDRL 66
           N  QR   L T   DP L+++  +A     E ++    +  +             ++ +L
Sbjct: 595 NLEQRKQELETLLADPDLYRSGQKAADTSAEYKNCKEQLVTLGDKWLKLCQQNDALKQKL 654

Query: 67  CDNLILL 73
            D L  L
Sbjct: 655 EDTLKAL 661


>gi|145545301|ref|XP_001458335.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426154|emb|CAK90938.1| unnamed protein product [Paramecium tetraurelia]
          Length = 787

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N +GG+ D D   ++L  L           +      L++E + L        +++  L 
Sbjct: 197 NKIGGM-DPDTLAKKLKELEKL--QKSFGGSPE---DLLKELERLKKKAKDADDLKKELD 250

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEV 121
               L E   ++ D  +L +   N Q +++E      Q   + +   D++   LE+
Sbjct: 251 --RQLRENDKQKTDLDVLDDLRKNAQNLQMENRQLNQQLNDMKNKLRDADQLRLEI 304


>gi|157371995|ref|YP_001479984.1| peptidyl-tRNA hydrolase domain-containing protein [Serratia
           proteamaculans 568]
 gi|157323759|gb|ABV42856.1| Class I peptide chain release factor [Serratia proteamaculans 568]
          Length = 137

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 24/103 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256
           S  + I +++  +   RA GAGGQHVN T +A+ +                      H+ 
Sbjct: 5   SRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALNNHLI 64

Query: 257 TG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           T    V+++ Q+ RSQ  N+  A   L   + +  + ++   A
Sbjct: 65  TADGVVIIKAQEYRSQELNREAALARLVTLIQQAMVVEKTRRA 107


>gi|312876134|ref|ZP_07736122.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797120|gb|EFR13461.1| seryl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 420

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 9   CLGGLFDWDNAVQRL-SFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKEIQDR 65
            +  + + D   ++L + + +        QN    +   L +E + +   ++ +KE+ D+
Sbjct: 26  SIAPILELDEKRRKLLAEVESLKA----LQNQKSKEVPKLKKEGKDVTELMNELKELSDK 81

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           + +              S ++E  D +++I L +     ES+  G+ D+ + 
Sbjct: 82  IKEL------------DSRVKEVEDEIEKILLTIPNIPHESVPVGKDDTENV 121


>gi|167760184|ref|ZP_02432311.1| hypothetical protein CLOSCI_02557 [Clostridium scindens ATCC 35704]
 gi|167662067|gb|EDS06197.1| hypothetical protein CLOSCI_02557 [Clostridium scindens ATCC 35704]
          Length = 547

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NC   +   D    R   +  +  +     +   AK L +ER+ L+  ++ +  +   L
Sbjct: 318 INCFADMAVNDEKAVR--AIEKRLTE----TDQSRAKALEKERKKLNKRLAELDRLFSSL 371

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
            ++ ++ E   E +     +  S   Q+ +LE+E +  E 
Sbjct: 372 YEDKVM-ERITERN----FEMMSGKYQKEQLEIEARLKEV 406


>gi|147678457|ref|YP_001212672.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
           thermopropionicum SI]
 gi|146274554|dbj|BAF60303.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 871

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 34/96 (35%), Gaps = 3/96 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQN---VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            D   +R+  L  + +     Q+       + +  E   L + +  +KE   +  + +  
Sbjct: 412 IDEIDRRIRQLEIEKQALAKEQDKGSQERLQKIEGELAALKSRLEDLKEHWRKEKELIQS 471

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
           +    E  + + L E +   +    +V   ++  + 
Sbjct: 472 IREIKERIEETRLAEQAAEREADLGKVAELRYGVMP 507


>gi|126290275|ref|XP_001371930.1| PREDICTED: similar to splicing factor 3b, subunit 1 [Monodelphis
           domestica]
          Length = 1025

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 2   KLSRQLNCLGGLFDWDNAVQR---LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           K+  +   L    D +   +R    + L  +  +  L +   E + L+ +   L+  +  
Sbjct: 751 KIDEERKALETKLDMEE-EERNKARAELEKR--EKDLLKAQQEHQSLLEKLSALEKKV-- 805

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
           I    D L       +L  E +    L+E     ++++ E+E K+ E L
Sbjct: 806 IVGGVDLLAKAEEQEKLLEESNME--LEERRKRAEQLRRELEEKEQERL 852


>gi|68565898|sp|Q7TNH6|NPHP3_MOUSE RecName: Full=Nephrocystin-3
 gi|32482575|gb|AAP84621.1| nephrocystin 3 [Mus musculus]
          Length = 1324

 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 20/129 (15%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEI------QDRL 66
            D +N   R + L                + ++RE+   L+     ++        +DR+
Sbjct: 115 LDTENKRLR-AELQAL---------QKTYQKILREKEGALEAKYQAMERAVTFEHDRDRV 164

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     E +   +L+     L+     ++ +  +    GE+DS+D   +V A   
Sbjct: 165 KRQFKIFRETKENEIQDLLR-AKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAA-- 221

Query: 127 GTESQDWAN 135
           GT+ + WA+
Sbjct: 222 GTQCEYWAS 230


>gi|212696620|ref|ZP_03304748.1| hypothetical protein ANHYDRO_01160 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676351|gb|EEB35958.1| hypothetical protein ANHYDRO_01160 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 566

 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 7/107 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D  +  + +  L  K  +    +N      +M+E           +    +     +L+ 
Sbjct: 93  DLISLEKNIRDLEVKMSEE---KNPDRLDEIMKEYAKKSEEFEKKQGYSYKSEIRGVLIG 149

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDA 117
           +  EE+D           Q+ ++E+     E     LL    +  D 
Sbjct: 150 MGFEEEDFQKEVSLLSGGQKARVELACLLLEKPDLILLDEPTNHLDI 196


>gi|56695052|ref|YP_165399.1| peptidyl-tRNA hydrolase domain protein [Ruegeria pomeroyi DSS-3]
 gi|56676789|gb|AAV93455.1| peptidyl-tRNA hydrolase domain protein [Ruegeria pomeroyi DSS-3]
          Length = 139

 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 29/95 (30%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------------------- 256
           + +I I + +      RASG GGQ+VN   SAV +                         
Sbjct: 5   TDDIAIQDWELSESFMRASGPGGQNVNKVSSAVELRFEAARSPSLPAPVKARLKRLAGRR 64

Query: 257 -TG---VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            TG   +V+QC + RSQ +N+     ++RA+L EL
Sbjct: 65  WTGEGAIVLQCDETRSQARNRE----IVRARLVEL 95


>gi|326800926|ref|YP_004318745.1| ABC transporter [Sphingobacterium sp. 21]
 gi|326551690|gb|ADZ80075.1| ABC transporter related protein [Sphingobacterium sp. 21]
          Length = 641

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL+++L+ L          + ++ +  +  D  L+ N  + K +          +S  ++
Sbjct: 569 KLNKELSVLEE--KVGELEKEVAAIEEQLTDQALYNNPQQLKEINLRYDSKKAELSQFQQ 626

Query: 62  IQDRLCDNLILLE 74
             + L D ++ LE
Sbjct: 627 RWETLADEILTLE 639


>gi|281360222|ref|NP_001163064.1| lethal (2) 01289, isoform G [Drosophila melanogaster]
 gi|272432352|gb|ACZ94344.1| lethal (2) 01289, isoform G [Drosophila melanogaster]
          Length = 1191

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 17/86 (19%)

Query: 11  GGLFDWDNAVQ------RLSFLNTKT-----EDPHLWQ------NVIEAKMLMRERQHLD 53
            G+ D+  +++      R+  +N K      ED           +  +++ ++ E +++D
Sbjct: 139 EGVLDFLTSLEAMDLPDRIEEVNAKILQKIIEDTDFVAVLFYDKDQKKSQKILAELENID 198

Query: 54  NAISFIKEIQDRLCDNLILLELALEE 79
           +          ++ D+    E  ++E
Sbjct: 199 DECDQNDIAFVKIDDDKEAKEWGIDE 224


>gi|302346561|ref|YP_003814859.1| DNA gyrase, A subunit [Prevotella melaninogenica ATCC 25845]
 gi|302150295|gb|ADK96556.1| DNA gyrase, A subunit [Prevotella melaninogenica ATCC 25845]
          Length = 859

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           +L+ L G    D   Q    L    +D   +  N    K +M+E   L        +++ 
Sbjct: 430 RLSQLTG-LRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKE--ELQEVKEKYGDVRR 486

Query: 65  RL 66
             
Sbjct: 487 TE 488


>gi|224091941|ref|XP_002309409.1| predicted protein [Populus trichocarpa]
 gi|222855385|gb|EEE92932.1| predicted protein [Populus trichocarpa]
          Length = 667

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 22/114 (19%)

Query: 4   SRQLNCLGGLFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKE 61
              +  + G  D +    +R   LN                 L +E      ++   +KE
Sbjct: 299 EAAIESIAGELDVEKKLRRRFESLNK---------------KLGKELAETKASLLKAVKE 343

Query: 62  IQDRLCDNLILL----ELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++      +++     ELA +  DD + ++E      ++  EVE ++    L+ 
Sbjct: 344 LESEKRARVVMQKVCDELARDIGDDKAEVEELKRESAKLCEEVEKEREMMQLAD 397


>gi|189239929|ref|XP_001813306.1| PREDICTED: similar to Myosin heavy chain CG17927-PF isoform 1
            [Tribolium castaneum]
          Length = 1960

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 40   IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCS 83
              ++ +  E Q  ++ ++ + +++ +L   L  LE +LE                E D  
Sbjct: 1001 ENSQRVSEELQAAEDKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKSKRKVEGDLK 1060

Query: 84   ILQETSDNLQRIKLEVEY 101
            + QE   +L+R K E+E 
Sbjct: 1061 LTQEAVADLERNKKELEQ 1078


>gi|121698146|ref|XP_001267729.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
 gi|119395871|gb|EAW06303.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
          Length = 1460

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 27/133 (20%)

Query: 14  FDWDNAVQRLSFLNTKT--EDPHLWQNVIEAKMLMR----------ERQHLDNAISFIK- 60
            D D  + +   L TK     P ++      K L R          +   +   ++ I+ 
Sbjct: 292 LDPDTLLPKYLELQTKLYNLQPEIFDQPKRGKKLSRGQANLSSDDPQVARIQRKVASIEN 351

Query: 61  -----------EIQDRLCDNLILLELALE---EDDCSILQETSDNLQRIKLEVEYKQFES 106
                        +D+L D         +   ++D S   E+ D  Q  +  V   +  +
Sbjct: 352 DVLFDRHEAEFRWRDKLDDLRREAAFTRQVARDEDRSAQAESEDIEQSKEKSVTEPENRA 411

Query: 107 LLSGEADSNDAYL 119
               + D     L
Sbjct: 412 PAMDDLDEAGDLL 424


>gi|116200067|ref|XP_001225845.1| hypothetical protein CHGG_08189 [Chaetomium globosum CBS 148.51]
 gi|88179468|gb|EAQ86936.1| hypothetical protein CHGG_08189 [Chaetomium globosum CBS 148.51]
          Length = 1351

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 11/118 (9%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            +++     L D D             +   L    I+ +   +E   L   +   +   
Sbjct: 343 KKRIEDREKLNDLDKMKSERDRFERIIQ--TL---QIKYQPQQQEIAELKRQLKEAESRL 397

Query: 64  DRLCDNLILLELALE--EDDCSILQETSD----NLQRIKLEVEYKQFESLLSGEADSN 115
             + D     E A+E    D  + +E +D     L  +K + E  + E  +  E +S 
Sbjct: 398 YNVEDIQQEHETAMELATLDREMAEEMADVYKTELDALKHKTEELKLEVDILREENSE 455


>gi|331084080|ref|ZP_08333187.1| hypothetical protein HMPREF0992_02111 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330402442|gb|EGG82012.1| hypothetical protein HMPREF0992_02111 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 636

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            +    R S ++ +   P +  NV E   L +E+  +   +  + E  + L +
Sbjct: 584 IEELETRDSEIDEEMAKPEVATNVAECVRLSKEKAEIAQKLEELYEKWEELAE 636


>gi|298246165|ref|ZP_06969971.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
 gi|297553646|gb|EFH87511.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
          Length = 864

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 42/127 (33%), Gaps = 25/127 (19%)

Query: 16  WDNAVQRLSFLNTKTE------DP-----------HLWQNVIEAKMLMRERQHLDNAISF 58
            D   +R+  L  + E      DP            +     + + L    +     +  
Sbjct: 411 IDALDRRIRQLQVEQEALKKETDPASRERRERVEADIANLNEQLRSLKLALESERAPVDE 470

Query: 59  IKEIQDRLCDNLILLELALEEDDCS--------ILQETSDNLQRIKLEVEYKQFESLLSG 110
           ++ ++ +L +  +  E A    D           ++E  + +Q ++ ++       +L  
Sbjct: 471 LRSLKKQLEEAQVQYEQAERSYDYESMARLRYGTIKELEERIQAMEAKLSAGGSSRMLKE 530

Query: 111 EADSNDA 117
           E D+ D 
Sbjct: 531 EVDAEDV 537


>gi|289523093|ref|ZP_06439947.1| DNA mismatch repair protein MutS [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503636|gb|EFD24800.1| DNA mismatch repair protein MutS [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 788

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 38/110 (34%), Gaps = 27/110 (24%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L  L    N   +LS L              +A+ L RER  +       +E
Sbjct: 510 ELKTSDTSLEKL--VSNLRAKLSDLE------------EKARELARERAEVQAVK---RE 552

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           +  +L         ALEE    I+ E     +R+  E +  +   LL  E
Sbjct: 553 LDRKLA--------ALEEKREGIIAEAEQKAKRLIKEAQ--ESAKLLLKE 592


>gi|289804857|ref|ZP_06535486.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 58

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%)

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           ERSQH NK  A  ++  +L +    +   + +       +I  G  +R +    + 
Sbjct: 1   ERSQHANKRLARLLIAWRLEQQRQNECAALKSERRLFHHQIERGNPLRIFKGMAFT 56


>gi|194670151|ref|XP_001788213.1| PREDICTED: utrophin-like [Bos taurus]
          Length = 3518

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 16/97 (16%)

Query: 19   AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
               RL  +N +      W ++         R HL+ +      +   L + +  L +  E
Sbjct: 2613 LQHRLDDMNQR------WNDLKA--KSASIRAHLEASAEKWNRLLTSLEELIKWLNMKDE 2664

Query: 79   E--------DDCSILQETSDNLQRIKLEVEYKQFESL 107
            E         D   LQ   D+ + ++ E++ K++  L
Sbjct: 2665 ELKKQMPVGGDVPALQLQYDHCKALRRELKEKEYSVL 2701


>gi|189239933|ref|XP_001813779.1| PREDICTED: similar to Myosin heavy chain CG17927-PF isoform 4
            [Tribolium castaneum]
          Length = 1960

 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 40   IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCS 83
              ++ +  E Q  ++ ++ + +++ +L   L  LE +LE                E D  
Sbjct: 1001 ENSQRVSEELQAAEDKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKSKRKVEGDLK 1060

Query: 84   ILQETSDNLQRIKLEVEY 101
            + QE   +L+R K E+E 
Sbjct: 1061 LTQEAVADLERNKKELEQ 1078


>gi|319649991|ref|ZP_08004140.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
 gi|317398172|gb|EFV78861.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
          Length = 865

 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA-ISFI 59
           M+L  +   L    D + + QRL+ L  +  +    ++   +   M+ +  L+   I  +
Sbjct: 423 MQLEIEEAALRKESD-EGSKQRLADLQKELAE---LKDQANS---MKAKWQLEKEGIQKV 475

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQET--------SDNLQRIKLEVEYKQFESLLSGE 111
           +E +++L      LE A    D +   E            L+ ++  V   Q E LL  E
Sbjct: 476 QEKREQLEKIRRELEEAENNYDLNKAAELRHGRIPSLERELKDLESAVNENQGERLLREE 535


>gi|298528382|ref|ZP_07015786.1| ABC transporter related protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298512034|gb|EFI35936.1| ABC transporter related protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 604

 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            R+   + G  D + A   ++ L  K   P +  +  E + L  E   L+ A + +  + 
Sbjct: 535 QREYESIEG--DIERAENEVAGLKEKMNRPEVMSDAKELERLCSE---LEQAEAALMRLY 589

Query: 64  DRLCDNLILL 73
            R  +   + 
Sbjct: 590 ARWEELEEMA 599


>gi|317970477|ref|ZP_07971867.1| protein chain release factor B [Synechococcus sp. CB0205]
          Length = 144

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 24/88 (27%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV--------------------- 261
           I  ++      R++G GGQ+VN  ++AV ++       V                     
Sbjct: 13  IPAAELTWSFRRSAGPGGQNVNKLETAVELSFDIEACSVLGPFQKQRLQARLPQLKGSSV 72

Query: 262 ---QCQQERSQHKNKAQAWNMLRAKLYE 286
              Q  + RSQ+KN+  A   + A L E
Sbjct: 73  LSIQASEHRSQYKNRCLALEKMAAVLRE 100


>gi|260587629|ref|ZP_05853542.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583]
 gi|260541894|gb|EEX22463.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583]
          Length = 636

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            +    R S ++ +   P +  NV E   L +E+  +   +  + E  + L +
Sbjct: 584 IEELETRDSEIDEEMAKPEVATNVAECVRLSKEKAEIAQKLEELYEKWEELAE 636


>gi|163848669|ref|YP_001636713.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
 gi|222526605|ref|YP_002571076.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
 gi|163669958|gb|ABY36324.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
 gi|222450484|gb|ACM54750.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
          Length = 861

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 16/134 (11%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISF 58
           M+L  +   L    D  +  +RL  L  +  +    +    A    + RERQ L+     
Sbjct: 422 MQLEIEREALRKEKDQASK-ERLEKLEQELAN---LREQRSALEAQIQRERQELE----R 473

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFE-----SLLSGEA 112
           I+++++++      +E A  + D +   E     L  ++ E++  + +      LL  E 
Sbjct: 474 IQQLKEKIEQTRAAIEQAQRQYDYNKAAELQYGTLVSLERELQAAEAQLGSQSRLLRQEV 533

Query: 113 DSNDAYLEVHAGAG 126
              D    +    G
Sbjct: 534 TETDIAEIISKWTG 547


>gi|300859293|ref|YP_003784276.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686747|gb|ADK29669.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302331542|gb|ADL21736.1| ATP-dependent chaperone protein ClpB [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277232|gb|ADO27131.1| ATP-dependent chaperone protein ClpB [Corynebacterium
           pseudotuberculosis I19]
          Length = 849

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 25/164 (15%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ-------HLD 53
           M++      +      +  V+RL              +    + L +E          L 
Sbjct: 405 MEIDSSPQEIDE---LERVVRRLEIEEVALSKETDAASQQRLEKLRQELADEREKLGELK 461

Query: 54  N-------AISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFE 105
                   AI  ++E ++ L       E+A  E D   + E     +  ++ +V   +  
Sbjct: 462 ARWNNEKSAIDKVREAKEELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAH 521

Query: 106 ----SLLSGEADSNDAYLEVHAGAG---GTESQDWANMLLRMYT 142
               ++LS E   +     V A  G   G   Q     LLRM +
Sbjct: 522 TTETTMLSEEVTPDTIADVVSAWTGIPAGKMLQGETEKLLRMES 565


>gi|114662522|ref|XP_510967.2| PREDICTED: protein fantom isoform 4 [Pan troglodytes]
          Length = 1315

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLE 98
           L ++   +  +   I+E+QDR+ D     EL  E  D       S   E    L+  +L+
Sbjct: 327 LEKQLHSMKFSERRIEELQDRINDLEKERELLKENYDKLYDSAFSAAHEEQWKLKEQQLK 386

Query: 99  VEYKQFESLLSGEADSNDAYLE 120
           V+  Q E+ L  +       L+
Sbjct: 387 VQIAQLETALKSDLTDKTEILD 408


>gi|120556271|ref|YP_960622.1| DNA repair protein RecN [Marinobacter aquaeolei VT8]
 gi|120326120|gb|ABM20435.1| DNA replication and repair protein RecN [Marinobacter aquaeolei
           VT8]
          Length = 559

 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 24/121 (19%)

Query: 1   MKLSRQLNCLGGLFD-WDNAVQRLSFLNTKTED---------------PHLWQNVIEAKM 44
           +++S   + L    D ++    RL+ +  +                  P L       + 
Sbjct: 274 IQISEAGDNLRRFVDDYEADPARLAEVEERLSAIYQMARKHRITPEELPELH------QR 327

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-QRIKLEVEYKQ 103
           L +E   LD     ++++Q  L +     + AL  +     +  +  L QRI  E+    
Sbjct: 328 LSQELAELDGGEGSLEQLQAELENLRARFD-ALATNLTETRRNAAIELDQRIARELAQLS 386

Query: 104 F 104
            
Sbjct: 387 M 387


>gi|149907616|ref|ZP_01896363.1| ABC transporter, ATP-binding protein [Moritella sp. PE36]
 gi|149809286|gb|EDM69215.1| ABC transporter, ATP-binding protein [Moritella sp. PE36]
          Length = 637

 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +L+ L T+  +  ++++  +A  L          +  I+  +    +    LE 
Sbjct: 571 LETLGDKLTALETQLSETSIYEDQNKA-KLKTALSEQAKFVVAIEGAETTWMELNEQLEE 629

Query: 76  ALEEDDCS 83
            +EE + +
Sbjct: 630 MIEESEQA 637


>gi|189239939|ref|XP_001813596.1| PREDICTED: similar to Myosin heavy chain CG17927-PF isoform 3
            [Tribolium castaneum]
          Length = 1960

 Score = 35.7 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 40   IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCS 83
              ++ +  E Q  ++ ++ + +++ +L   L  LE +LE                E D  
Sbjct: 1001 ENSQRVSEELQAAEDKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKSKRKVEGDLK 1060

Query: 84   ILQETSDNLQRIKLEVEY 101
            + QE   +L+R K E+E 
Sbjct: 1061 LTQEAVADLERNKKELEQ 1078


>gi|189239937|ref|XP_001814083.1| PREDICTED: similar to Myosin heavy chain CG17927-PF isoform 6
            [Tribolium castaneum]
          Length = 1960

 Score = 35.7 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 40   IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCS 83
              ++ +  E Q  ++ ++ + +++ +L   L  LE +LE                E D  
Sbjct: 1001 ENSQRVSEELQAAEDKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKSKRKVEGDLK 1060

Query: 84   ILQETSDNLQRIKLEVEY 101
            + QE   +L+R K E+E 
Sbjct: 1061 LTQEAVADLERNKKELEQ 1078


>gi|189239935|ref|XP_001813466.1| PREDICTED: similar to Myosin heavy chain CG17927-PF isoform 2
            [Tribolium castaneum]
          Length = 1960

 Score = 35.7 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 40   IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCS 83
              ++ +  E Q  ++ ++ + +++ +L   L  LE +LE                E D  
Sbjct: 1001 ENSQRVSEELQAAEDKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKSKRKVEGDLK 1060

Query: 84   ILQETSDNLQRIKLEVEY 101
            + QE   +L+R K E+E 
Sbjct: 1061 LTQEAVADLERNKKELEQ 1078


>gi|119568232|gb|EAW47847.1| utrophin (homologous to dystrophin), isoform CRA_c [Homo sapiens]
          Length = 1474

 Score = 35.7 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 16/97 (16%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  +N +      W ++         R HL+ +      +   L + +  L +  E
Sbjct: 570 LQHRLDDMNQR------WNDLKA--KSASIRAHLEASAEKWNRLLMSLEELIKWLNMKDE 621

Query: 79  E--------DDCSILQETSDNLQRIKLEVEYKQFESL 107
           E         D   LQ   D+ + ++ E++ K++  L
Sbjct: 622 ELKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVL 658


>gi|73980575|ref|XP_532882.2| PREDICTED: similar to SMC6 protein [Canis familiaris]
          Length = 1606

 Score = 35.7 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 6/112 (5%)

Query: 4   SRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +R LN    L  D +   +R+  L  K+ D  L       +   ++   L   +  +++ 
Sbjct: 883 NRSLNEYKALMKDDEQLCKRIEEL-KKSTDQSL--EPERLERQ-KKISWLKERVKALQDQ 938

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEAD 113
           +  +   +   + A+E+D    ++   + L  +  L    +Q + L   + D
Sbjct: 939 ESSINQEIEQFQQAIEKDKEERIRIKREELDVKHTLSYNQRQLKELKDSKTD 990


>gi|302206981|gb|ADL11323.1| ATP-dependent chaperone protein ClpB [Corynebacterium
           pseudotuberculosis C231]
          Length = 849

 Score = 35.7 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 25/164 (15%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ-------HLD 53
           M++      +      +  V+RL              +    + L +E          L 
Sbjct: 405 MEIDSSPQEIDE---LERVVRRLEIEEVALSKETDAASQQRLEKLRQELADEREKLGELK 461

Query: 54  N-------AISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFE 105
                   AI  ++E ++ L       E+A  E D   + E     +  ++ +V   +  
Sbjct: 462 ARWNNEKSAIDKVREAKEELEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAH 521

Query: 106 ----SLLSGEADSNDAYLEVHAGAG---GTESQDWANMLLRMYT 142
               ++LS E   +     V A  G   G   Q     LLRM +
Sbjct: 522 TTETTMLSEEVTPDTIADVVSAWTGIPAGKMLQGETEKLLRMES 565


>gi|288554868|ref|YP_003426803.1| ABC transporter ATP-binding protein [Bacillus pseudofirmus OF4]
 gi|288546028|gb|ADC49911.1| ABC transporter ATP-binding protein [Bacillus pseudofirmus OF4]
          Length = 647

 Score = 35.7 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           + +  +FD      +RL  +  K  DP L  +      L+ E   L 
Sbjct: 85  DEMLTVFDPLLKMEKRLREMEQKMSDPSLLDHEASYNKLLAEYDQLQ 131


>gi|302531030|ref|ZP_07283372.1| class I peptide chain release factor [Streptomyces sp. AA4]
 gi|302439925|gb|EFL11741.1| class I peptide chain release factor [Streptomyces sp. AA4]
          Length = 142

 Score = 35.7 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 38/116 (32%), Gaps = 30/116 (25%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV--------------------- 261
           I  ++ R    R+SG GGQ VNTTDS V ++    G  V                     
Sbjct: 13  IPGAELRERFSRSSGPGGQGVNTTDSRVELSFDVAGSAVIPPALKERITARLGARLVGGV 72

Query: 262 ---QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
                 + RSQ  N+  A   L   L       +       +   T+   G + R 
Sbjct: 73  LTIAASEYRSQLMNRDAARERLAEVL------TQASAPPPAKRRPTKPSRGSKERR 122


>gi|189239927|ref|XP_001814139.1| PREDICTED: similar to Myosin heavy chain CG17927-PF isoform 7
            [Tribolium castaneum]
          Length = 1960

 Score = 35.7 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 40   IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE----------------EDDCS 83
              ++ +  E Q  ++ ++ + +++ +L   L  LE +LE                E D  
Sbjct: 1001 ENSQRVSEELQAAEDKVNHLNKVKAKLEQTLDELEDSLEREKKLRGDVEKSKRKVEGDLK 1060

Query: 84   ILQETSDNLQRIKLEVEY 101
            + QE   +L+R K E+E 
Sbjct: 1061 LTQEAVADLERNKKELEQ 1078


>gi|149437081|ref|XP_001516246.1| PREDICTED: similar to Em:AC016026.2 [Ornithorhynchus anatinus]
          Length = 1901

 Score = 35.7 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 9/86 (10%)

Query: 25   FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
             L  +             + L+RER  +++ +   +E+ +       +LE+  + D  S+
Sbjct: 1819 ELELE-------DRQSRLQQLLRERMAVEDHLKTAEELSEEKRILNEMLEVVEQRD--SL 1869

Query: 85   LQETSDNLQRIKLEVEYKQFESLLSG 110
            +    +   R K E +  +   L  G
Sbjct: 1870 VALLEEQRLREKEEDKDLEAVMLSKG 1895


>gi|325846946|ref|ZP_08169803.1| ABC transporter, ATP-binding protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481188|gb|EGC84232.1| ABC transporter, ATP-binding protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 566

 Score = 35.7 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 7/107 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D  +  + +  L  K  +    +N  +   +M+E           +    +     +L+ 
Sbjct: 93  DLISLEKNIRDLEVKMSEE---KNPDKLDEIMKEYAKKSEEFEKKQGYSYKSEIRGVLIG 149

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDA 117
           +  EE+D           Q+ ++E+     +     LL    +  D 
Sbjct: 150 MGFEEEDFQKEVSLLSGGQKARVELACLLLQKPDLILLDEPTNHLDI 196


>gi|297698740|ref|XP_002826467.1| PREDICTED: protein fantom-like isoform 2 [Pongo abelii]
          Length = 1315

 Score = 35.7 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLE 98
           L ++   +  +   I+E+QDR+ D     EL  E  D       S   E    L+  +L+
Sbjct: 327 LEKQLHSMKFSERRIEELQDRINDLEKERELLKENYDKLYDSAFSAAHEEQWKLKEQQLK 386

Query: 99  VEYKQFESLLSGEADSNDAYLE 120
           V+  Q E+ L  +       L+
Sbjct: 387 VQIAQLETALKSDLTDKTEILD 408


>gi|291389211|ref|XP_002711049.1| PREDICTED: keratin 71-like [Oryctolagus cuniculus]
          Length = 523

 Score = 35.7 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 13/106 (12%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI--------SFIKEIQDRL 66
           D  N    +S L    +   L  ++  AK   ++  +L+ AI        S +K+ + +L
Sbjct: 340 DLKNTKNEISELTRVIQR--LRSDIENAK---KQASNLETAIADAEQRGDSALKDARTKL 394

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            +    L  A EE    +         ++ L++E   +  LL GE 
Sbjct: 395 DELESALHQAKEELARMMRDYQELMSVKLALDMEIATYRKLLEGEE 440


>gi|149714794|ref|XP_001504524.1| PREDICTED: keratin 4 [Equus caballus]
          Length = 607

 Score = 35.7 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 20/110 (18%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   ++  G   +  N    +S LN   +               R R  ++N     + 
Sbjct: 421 QLQTSVDLHGD--NLKNTKNEISELNRLIQ---------------RLRAEIENVKKQCQT 463

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLS 109
           +Q  + D     ELAL +D  S   E    LQ+ K E+     +++ LLS
Sbjct: 464 LQASVADAEQRGELAL-KDAHSKRTELEAALQKAKEELARMLREYQDLLS 512


>gi|118442834|ref|NP_056087.2| protein fantom isoform a [Homo sapiens]
 gi|296434514|sp|Q68CZ1|FTM_HUMAN RecName: Full=Protein fantom; AltName: Full=RPGR-interacting
           protein 1-like protein; Short=RPGRIP1-like protein
          Length = 1315

 Score = 35.7 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLE 98
           L ++   +  +   I+E+QDR+ D     EL  E  D       S   E    L+  +L+
Sbjct: 327 LEKQLHSMKFSERRIEELQDRINDLEKERELLKENYDKLYDSAFSAAHEEQWKLKEQQLK 386

Query: 99  VEYKQFESLLSGEADSNDAYLE 120
           V+  Q E+ L  +       L+
Sbjct: 387 VQIAQLETALKSDLTDKTEILD 408


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.144    0.389 

Lambda     K      H
   0.267   0.0439    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,387,235,262
Number of Sequences: 14124377
Number of extensions: 265187252
Number of successful extensions: 1505528
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 11413
Number of HSP's successfully gapped in prelim test: 7951
Number of HSP's that attempted gapping in prelim test: 1397745
Number of HSP's gapped (non-prelim): 66823
length of query: 355
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 215
effective length of database: 2,865,380,850
effective search space: 616056882750
effective search space used: 616056882750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 82 (36.1 bits)